Citrus Sinensis ID: 008794

Local Sequence Feature Prediction

Prediction and Method	Result

Residue Number Marker

Protein Sequence

Secondary Structure (Consensus)

Disordered Region (Consensus)

Transmembrane Helix (Consensus)

Signal Peptide (Consensus)

Coiled Coil (COILS)

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550---

MALYLLYETASGYSLFLAHGLDQIGQNTEAVRSSISDMNRFGKVVQLTAFHPFESALDALNQCNSVSEGLMTNELRNFLELNLPKVKEGKKAKFSLGVSEPKIGSHIFEETKIPCQSNEFVLELLRGVRLHFDRFIKDLKPGDLEKAQLGLGHSYSRAKVKFNVNRVDNMVIQAIFLLDTLDKDINSFSMRVREWYSWHFPELVKIVNDNYLYARVVKLIEDKSKLTDDMVPALTDILGDEDKAKEIVEAGKASMGQDLSAVDLVNVQMFAQRVMDLSEYRKKLYEYLVTKMNDIAPNLASLIGEVVGARLISHAGSLTNLAKCPSSTLQILGAEKALFRALKTRGNTPKYGLIFHSSFIGRASARNKGRMARYLANKCSIASRIDCFAEKNTTIFGEKLREQVEERLDFYDKGVAPRKNIDVMKAAIESTENNDTEMKEAATDTSGKKSKKKKSKSEIAVDGEPMSVDKVAATNGDASEEPKSEKTKKKKDKRKLDEEPAADLNGVSGVDAPEDGTAKKKKKKKKAEDNEEDVQAKSEKKKKKKSKSEDGDE

ccEEEEEccccEEEEEEEcccccccccHHHHHHHHHcHHHHcccEEEccccccccHHHHHHHHHHHHcccccHHHHHHHHHHccccccccccccEEEEccHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHcccccHHHHHHHcccccHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHcccccccccHHHHHHccccHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHcccccccHHHccccHHHHHccccccHHHHHHHHHHHHHHHccccccccEEEEcccccccccccccccHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHcccccccccHHHcHHHHHHccccHHHHHHccccccccccHHHccccccccccccccccHccccccccccccccHHHHHHHHHccccccccccccccccccccccccccHHHHHHHHccccHHHHHcHHHccccccccccccc

MALYLLYETASGYSLFLAHGLDQIGQNTEAVRSSISDMNRFGKVVQLTAFHPFESALDALNQCNSVSEGLMTNELRNFLELNLPKVKEGKKAKFSLGVSEPKIGSHIFEETKIPCQSNEFVLELLRGVRLHFDRFIKDLKPGDLEKAQLGLGHSYSRAKVKFNVNRVDNMVIQAIFLLDTLDKDINSFSMRVREWYSWHFPELVKIVNDNYLYARVVKLIEDKSKLTDDMVPALTDILGDEDKAKEIV**G****GQDLSAVDLVNVQMFAQRVMDLSEYRKKLYEYLVTKMNDIAPNLASLIGEVVGARLISHAGSLTNLAKCPSSTLQILGAEKALFRALKTRGNTPKYGLIFHSSFIGRASARNKGRMARYLANKCSIASRIDCFAEKNTTIFGEKLREQVEERLDFYDKGVAPR**I************************************************************************************************************************************

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Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries

Annotation	Function Description	Confidence Level	Reference Protein
Nucleolar protein 56	Required for 60S ribosomal subunit biogenesis.	probable	Q54MT2
Uncharacterized NOP5 family protein K07C5.4		probable	Q21276
Nucleolar protein 56	Involved in the early to middle stages of 60S ribosomal subunit biogenesis.	probable	Q9D6Z1

Prediction of Enzyme Commission Number

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3ICX, chain A
Confidence level:very confident
Coverage over the Query: 166-332,352-415
View the alignment between query and template
View the model in PyMOL

Template: 2NNW, chain A
Confidence level:very confident
Coverage over the Query: 5-22,46-335,349-411
View the alignment between query and template
View the model in PyMOL