Query 008799
Match_columns 553
No_of_seqs 208 out of 1578
Neff 8.8
Searched_HMMs 29240
Date Mon Mar 25 11:58:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008799.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/008799hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1aoz_A Ascorbate oxidase; oxid 100.0 6E-100 2E-104 825.8 53.9 509 21-553 1-538 (552)
2 3sqr_A Laccase; multicopper ox 100.0 1.9E-95 6E-100 783.5 54.5 466 20-538 64-547 (580)
3 1v10_A Laccase; multicopper bl 100.0 1.9E-94 6.4E-99 776.0 45.7 490 6-553 6-508 (521)
4 1zpu_A Iron transport multicop 100.0 2.7E-93 9.1E-98 767.8 48.6 477 22-553 1-500 (534)
5 3t6v_A Laccase; beta barrel, o 100.0 1.4E-92 4.8E-97 753.2 47.0 456 23-535 4-471 (495)
6 3pxl_A Laccase; 4-copper prote 100.0 3.1E-92 1E-96 750.4 49.1 456 23-535 3-471 (499)
7 2q9o_A Laccase-1; multicopper 100.0 8.3E-91 2.8E-95 753.1 45.6 471 19-537 29-523 (559)
8 1hfu_A Laccase 1; oxidoreducta 100.0 1.5E-90 5.1E-95 743.3 43.7 468 24-553 5-487 (503)
9 2xu9_A Laccase; oxidoreductase 100.0 1.4E-83 4.7E-88 679.0 39.7 402 20-534 13-439 (439)
10 2uxt_A Protein SUFI, SUFI; oxi 100.0 5.3E-83 1.8E-87 675.2 32.3 406 23-538 18-444 (451)
11 3abg_A Bilirubin oxidase; clea 100.0 1.9E-81 6.6E-86 674.2 38.8 421 22-537 35-477 (534)
12 2wsd_A Spore coat protein A; o 100.0 1.2E-80 4.1E-85 668.1 39.3 429 23-535 25-510 (513)
13 3zx1_A Oxidoreductase, putativ 100.0 8.2E-80 2.8E-84 650.6 40.2 413 19-534 46-480 (481)
14 3gyr_A PHS, phenoxazinone synt 100.0 7.7E-79 2.6E-83 672.6 36.6 463 21-538 30-594 (612)
15 3aw5_A Multicopper oxidase; be 100.0 4.4E-79 1.5E-83 644.2 32.8 396 23-534 20-448 (448)
16 3od3_A Blue copper oxidase CUE 100.0 1.4E-77 4.7E-82 633.2 33.7 421 22-533 16-488 (488)
17 2g23_A PHS, phenoxazinone synt 100.0 1.4E-75 4.6E-80 633.0 41.5 459 21-537 30-593 (612)
18 3g5w_A Multicopper oxidase typ 100.0 1.1E-53 3.7E-58 430.7 30.7 271 22-306 1-278 (318)
19 2j5w_A Ceruloplasmin, ferroxid 100.0 6.6E-53 2.3E-57 486.2 41.1 270 15-306 13-358 (1065)
20 2r7e_A Coagulation factor VIII 100.0 1.7E-54 5.8E-59 480.3 18.1 237 27-284 50-314 (742)
21 2zwn_A Two-domain type laccase 100.0 3.2E-52 1.1E-56 424.7 33.4 271 22-306 2-279 (339)
22 3kw8_A Laccase, putative coppe 100.0 3.6E-50 1.2E-54 397.8 27.1 133 19-161 3-154 (276)
23 2dv6_A Nitrite reductase; elec 100.0 3E-49 1E-53 419.4 29.0 390 21-538 26-436 (447)
24 3tas_A Small laccase, multi-co 100.0 3.7E-49 1.3E-53 397.4 27.3 185 17-244 7-211 (313)
25 1kbv_A ANIA, major outer membr 100.0 2.2E-48 7.6E-53 394.4 28.6 263 19-307 34-310 (327)
26 3gdc_A Multicopper oxidase; be 100.0 6.4E-48 2.2E-52 384.0 30.1 237 20-284 31-273 (288)
27 3cg8_A Laccase; oxidoreductase 100.0 1.1E-45 3.6E-50 376.1 27.0 134 20-164 45-198 (343)
28 2j5w_A Ceruloplasmin, ferroxid 100.0 1.3E-46 4.4E-51 433.8 20.1 398 40-538 616-1061(1065)
29 2zoo_A Probable nitrite reduct 100.0 2.4E-44 8.3E-49 380.9 28.7 263 19-307 24-300 (442)
30 3t9w_A Small laccase, multi-co 100.0 2.3E-44 7.8E-49 359.6 22.8 227 16-284 22-272 (299)
31 1mzy_A Copper-containing nitri 100.0 1.5E-43 5.2E-48 360.6 29.0 269 18-306 27-320 (333)
32 1oe1_A Dissimilatory copper-co 100.0 1.9E-42 6.4E-47 353.1 28.9 270 19-307 28-321 (336)
33 2bw4_A Copper-containing nitri 100.0 9.9E-43 3.4E-47 355.8 25.3 271 18-307 33-327 (340)
34 1sdd_B Coagulation factor V; c 100.0 1.1E-40 3.9E-45 368.2 25.4 248 20-284 3-312 (647)
35 1sdd_A Coagulation factor V; c 100.0 1.7E-41 6E-46 340.6 9.5 213 43-284 50-285 (306)
36 2dv6_A Nitrite reductase; elec 100.0 1.1E-38 3.8E-43 338.2 30.9 259 21-306 161-435 (447)
37 2r7e_B Coagulation factor VIII 100.0 4.1E-40 1.4E-44 365.6 11.2 248 20-284 130-441 (770)
38 2r7e_A Coagulation factor VIII 100.0 4.3E-37 1.5E-41 341.0 6.3 216 50-285 448-697 (742)
39 3gdc_A Multicopper oxidase; be 100.0 3.8E-29 1.3E-33 248.6 18.9 233 186-535 54-288 (288)
40 3g5w_A Multicopper oxidase typ 100.0 9.9E-28 3.4E-32 241.4 17.1 243 187-537 23-278 (318)
41 2zwn_A Two-domain type laccase 100.0 1.6E-27 5.4E-32 242.5 18.5 240 187-537 24-279 (339)
42 3t9w_A Small laccase, multi-co 99.9 3.2E-27 1.1E-31 235.6 17.3 215 206-538 58-290 (299)
43 1sdd_A Coagulation factor V; c 99.9 1.3E-24 4.6E-29 217.8 2.8 237 189-536 52-301 (306)
44 2bw4_A Copper-containing nitri 99.9 8.7E-21 3E-25 193.3 23.9 95 429-539 231-328 (340)
45 1sdd_B Coagulation factor V; c 99.9 2.4E-21 8.1E-26 213.9 21.0 245 206-535 69-327 (647)
46 1kbv_A ANIA, major outer membr 99.9 5.9E-21 2E-25 193.0 21.6 237 187-538 59-310 (327)
47 1mzy_A Copper-containing nitri 99.8 5.3E-19 1.8E-23 179.5 22.9 94 429-538 225-321 (333)
48 2r7e_B Coagulation factor VIII 99.8 2.3E-21 7.9E-26 215.4 4.6 246 206-534 199-455 (770)
49 1oe1_A Dissimilatory copper-co 99.8 5.1E-18 1.8E-22 172.5 24.2 276 187-552 54-336 (336)
50 2zoo_A Probable nitrite reduct 99.8 2.4E-18 8.2E-23 181.6 19.1 237 187-538 49-300 (442)
51 2xu9_A Laccase; oxidoreductase 99.7 9.3E-17 3.2E-21 168.9 20.8 229 23-284 146-425 (439)
52 2uxt_A Protein SUFI, SUFI; oxi 99.7 1.9E-16 6.4E-21 166.9 23.1 223 23-284 152-426 (451)
53 1v10_A Laccase; multicopper bl 99.7 6.5E-15 2.2E-19 158.0 22.7 236 42-283 191-475 (521)
54 1hfu_A Laccase 1; oxidoreducta 99.6 9.5E-15 3.2E-19 156.1 23.0 256 25-283 143-454 (503)
55 3zx1_A Oxidoreductase, putativ 99.6 2.2E-14 7.5E-19 151.3 20.7 239 24-284 181-466 (481)
56 3t6v_A Laccase; beta barrel, o 99.6 1.2E-13 4.2E-18 146.5 22.3 239 41-283 167-455 (495)
57 1zpu_A Iron transport multicop 99.6 2.6E-13 9E-18 145.7 24.2 222 42-283 167-465 (534)
58 3pxl_A Laccase; 4-copper prote 99.5 2.8E-13 9.6E-18 143.8 22.1 239 41-283 165-455 (499)
59 3od3_A Blue copper oxidase CUE 99.5 2E-13 6.8E-18 144.0 19.6 250 24-284 151-475 (488)
60 1aoz_A Ascorbate oxidase; oxid 99.5 3.2E-13 1.1E-17 146.0 20.5 210 55-283 205-509 (552)
61 3cvb_A Plastocyanin; cupredoxi 99.5 3.9E-15 1.3E-19 124.4 3.9 90 49-142 14-105 (105)
62 2g23_A PHS, phenoxazinone synt 99.5 8E-13 2.7E-17 143.0 22.1 230 41-284 253-576 (612)
63 2q9o_A Laccase-1; multicopper 99.5 1.3E-12 4.5E-17 141.2 23.6 240 42-284 195-506 (559)
64 3kw8_A Laccase, putative coppe 99.5 8.3E-14 2.8E-18 137.1 11.7 100 45-146 157-269 (276)
65 3aw5_A Multicopper oxidase; be 99.5 5.5E-13 1.9E-17 140.2 18.2 212 40-284 167-434 (448)
66 3tas_A Small laccase, multi-co 99.5 3E-13 1E-17 135.5 14.7 215 206-538 42-274 (313)
67 2wsd_A Spore coat protein A; o 99.4 2.1E-12 7.2E-17 138.3 17.0 218 41-284 229-495 (513)
68 1iby_A Nitrosocyanin; RED copp 99.4 9E-13 3.1E-17 111.3 9.9 105 24-142 2-112 (112)
69 3abg_A Bilirubin oxidase; clea 99.4 5.6E-12 1.9E-16 135.1 17.8 213 42-284 201-460 (534)
70 2cal_A Rusticyanin; iron respi 99.4 1.3E-12 4.4E-17 116.4 9.9 99 38-141 46-154 (154)
71 3sqr_A Laccase; multicopper ox 99.3 1.8E-10 6.1E-15 123.9 23.7 235 42-283 225-528 (580)
72 3cg8_A Laccase; oxidoreductase 99.3 1.6E-11 5.5E-16 124.3 11.3 100 45-146 198-310 (343)
73 1fwx_A Nitrous oxide reductase 99.2 2E-11 7E-16 130.1 10.2 96 38-144 497-594 (595)
74 3gyr_A PHS, phenoxazinone synt 99.2 3.7E-10 1.3E-14 124.0 18.6 91 187-284 459-576 (612)
75 2ov0_A Amicyanin; beta-sandwic 99.2 1.4E-10 4.8E-15 96.4 10.0 79 48-141 27-105 (105)
76 2aan_A Auracyanin A; cupredoxi 99.1 2.4E-10 8.2E-15 100.2 9.8 94 430-534 36-139 (139)
77 3cvb_A Plastocyanin; cupredoxi 99.1 2.6E-10 9E-15 94.8 8.6 85 430-535 20-105 (105)
78 2gim_A Plastocyanin; beta shee 98.9 2.4E-09 8.4E-14 89.0 8.8 83 54-142 20-106 (106)
79 2aan_A Auracyanin A; cupredoxi 98.8 1.7E-08 5.8E-13 88.3 11.4 91 50-141 31-139 (139)
80 2gim_A Plastocyanin; beta shee 98.8 1.5E-08 5.3E-13 84.1 8.5 83 430-534 21-105 (106)
81 1qhq_A Protein (auracyanin); e 98.7 9.8E-08 3.3E-12 83.6 11.3 89 53-142 32-140 (140)
82 4hci_A Cupredoxin 1; structura 98.7 4.8E-08 1.7E-12 80.2 8.5 79 48-141 22-100 (100)
83 1qhq_A Protein (auracyanin); e 98.6 8.2E-08 2.8E-12 84.1 9.0 98 430-534 34-139 (140)
84 3c75_A Amicyanin; copper prote 98.6 1.2E-07 4.2E-12 81.8 8.8 79 48-141 54-132 (132)
85 2plt_A Plastocyanin; electron 98.6 1.1E-07 3.9E-12 77.6 7.8 79 54-141 18-98 (98)
86 2plt_A Plastocyanin; electron 98.5 2.6E-07 9E-12 75.4 8.5 80 430-534 19-98 (98)
87 1pcs_A Plastocyanin; electron 98.5 2E-07 6.7E-12 76.1 7.4 80 54-141 19-98 (98)
88 1pcs_A Plastocyanin; electron 98.5 4.3E-07 1.5E-11 74.1 9.0 78 430-534 20-98 (98)
89 1bxv_A Plastocyanin; copper pr 98.5 3.4E-07 1.2E-11 73.5 7.4 73 54-141 19-91 (91)
90 1b3i_A PETE protein, protein ( 98.5 5.3E-07 1.8E-11 73.4 8.4 77 54-141 19-97 (97)
91 1bxv_A Plastocyanin; copper pr 98.4 5.6E-07 1.9E-11 72.2 8.1 72 430-534 20-91 (91)
92 1kdj_A Plastocyanin; electron 98.4 5.6E-07 1.9E-11 74.0 7.9 82 54-141 17-102 (102)
93 1iby_A Nitrosocyanin; RED copp 98.4 8.3E-07 2.8E-11 74.3 9.0 74 430-535 39-112 (112)
94 3tu6_A Pseudoazurin (blue copp 98.4 6.2E-07 2.1E-11 76.5 7.9 76 54-144 23-98 (127)
95 3erx_A Pseudoazurin; copper pr 98.4 9.1E-07 3.1E-11 75.0 8.6 75 54-143 21-95 (123)
96 1b3i_A PETE protein, protein ( 98.4 7.4E-07 2.5E-11 72.5 7.1 78 430-534 20-97 (97)
97 4hci_A Cupredoxin 1; structura 98.3 1.5E-06 5.2E-11 71.1 8.8 72 430-534 29-100 (100)
98 1plc_A Plastocyanin; electron 98.3 1.7E-06 5.7E-11 70.7 8.8 77 54-141 17-99 (99)
99 1byp_A Protein (plastocyanin); 98.3 2.1E-06 7.3E-11 70.0 9.3 77 54-141 17-99 (99)
100 1byp_A Protein (plastocyanin); 98.3 8.1E-07 2.8E-11 72.6 6.7 82 430-534 18-99 (99)
101 3ef4_A Pseudoazurin, blue copp 98.3 1.5E-06 5.1E-11 73.7 8.0 75 54-143 22-96 (124)
102 1id2_A Amicyanin; beta barrel, 98.2 7.9E-06 2.7E-10 67.5 9.8 77 50-141 30-106 (106)
103 1cuo_A Protein (azurin ISO-2); 98.2 4.3E-06 1.5E-10 71.5 8.2 88 54-142 18-129 (129)
104 3ay2_A Lipid modified azurin p 98.1 5E-06 1.7E-10 74.0 7.7 92 50-142 54-167 (167)
105 1kdj_A Plastocyanin; electron 98.1 4.2E-06 1.4E-10 68.6 6.7 84 430-534 18-102 (102)
106 1paz_A Pseudoazurin precursor; 98.1 9.7E-06 3.3E-10 68.8 9.0 75 54-143 21-95 (123)
107 1iuz_A Plastocyanin; electron 98.1 1E-05 3.5E-10 65.8 8.9 77 54-141 18-98 (98)
108 1pmy_A Pseudoazurin; electron 98.1 9.9E-06 3.4E-10 68.7 8.0 76 54-144 21-96 (123)
109 1plc_A Plastocyanin; electron 98.0 8.3E-06 2.9E-10 66.4 6.9 82 430-534 18-99 (99)
110 3sbq_A Nitrous-oxide reductase 98.0 1.6E-05 5.4E-10 83.2 9.9 97 36-143 538-638 (638)
111 2cal_A Rusticyanin; iron respi 98.0 1.7E-05 6E-10 70.1 8.3 89 429-534 61-154 (154)
112 2iaa_C Azurin; quinoprotein, t 98.0 5.2E-05 1.8E-09 64.6 11.0 91 50-142 13-128 (128)
113 2ccw_A Azurin II, AZN-2; elect 97.9 2.9E-05 1E-09 66.3 8.9 87 54-142 18-129 (129)
114 1fwx_A Nitrous oxide reductase 97.9 2.6E-05 8.7E-10 83.3 10.3 78 429-536 513-593 (595)
115 1nwp_A Azurin; electron transp 97.9 8.1E-05 2.8E-09 63.4 11.1 91 50-141 14-128 (128)
116 2ux6_A Pseudoazurin; type-1 co 97.8 4.6E-05 1.6E-09 64.5 7.7 74 54-144 21-94 (122)
117 2ov0_A Amicyanin; beta-sandwic 97.8 6.8E-05 2.3E-09 61.7 8.4 72 430-534 34-105 (105)
118 3ef4_A Pseudoazurin, blue copp 97.2 0.00089 3E-08 56.5 7.7 74 430-536 23-96 (124)
119 3tu6_A Pseudoazurin (blue copp 97.2 0.00069 2.4E-08 57.5 7.1 75 430-537 24-98 (127)
120 3erx_A Pseudoazurin; copper pr 97.2 0.0013 4.5E-08 55.5 8.2 74 430-536 22-95 (123)
121 3fsa_A Azurin; copper, cupredo 97.1 0.0026 8.8E-08 53.3 9.7 88 51-141 15-125 (125)
122 1iuz_A Plastocyanin; electron 97.0 0.0024 8.3E-08 51.5 8.5 80 430-534 19-98 (98)
123 1id2_A Amicyanin; beta barrel, 96.9 0.0039 1.3E-07 51.1 8.5 72 430-534 35-106 (106)
124 3c75_A Amicyanin; copper prote 96.7 0.005 1.7E-07 52.7 8.4 72 430-534 61-132 (132)
125 2cua_A Protein (CUA); CUA cent 96.5 0.0094 3.2E-07 51.0 8.6 74 54-142 60-135 (135)
126 3s8f_B Cytochrome C oxidase su 96.3 0.014 4.9E-07 51.7 8.9 74 54-142 93-168 (168)
127 3sbq_A Nitrous-oxide reductase 96.3 0.016 5.5E-07 60.8 10.4 78 430-535 559-637 (638)
128 1paz_A Pseudoazurin precursor; 96.3 0.015 5.3E-07 48.8 8.3 37 496-536 59-95 (123)
129 1pmy_A Pseudoazurin; electron 96.1 0.016 5.5E-07 48.7 7.5 38 495-536 58-95 (123)
130 3ay2_A Lipid modified azurin p 95.9 0.0099 3.4E-07 52.7 5.7 45 489-534 120-166 (167)
131 2cua_A Protein (CUA); CUA cent 95.8 0.037 1.3E-06 47.3 8.9 70 431-534 62-134 (135)
132 1cuo_A Protein (azurin ISO-2); 95.4 0.087 3E-06 44.6 9.4 44 490-534 82-128 (129)
133 2ux6_A Pseudoazurin; type-1 co 95.1 0.058 2E-06 45.2 7.5 72 430-536 22-93 (122)
134 2iaa_C Azurin; quinoprotein, t 94.2 0.14 4.9E-06 43.1 7.7 44 490-534 81-127 (128)
135 2ccw_A Azurin II, AZN-2; elect 94.2 0.093 3.2E-06 44.4 6.5 43 491-534 83-128 (129)
136 3s8f_B Cytochrome C oxidase su 93.8 0.26 8.8E-06 43.6 8.9 72 431-534 95-167 (168)
137 1nwp_A Azurin; electron transp 93.4 0.29 1E-05 41.2 8.2 44 490-534 82-128 (128)
138 3fsa_A Azurin; copper, cupredo 91.4 0.88 3E-05 37.9 8.5 95 431-534 20-125 (125)
139 3isy_A Bsupi, intracellular pr 84.5 8.1 0.00028 31.8 9.9 67 215-282 21-100 (120)
140 3isy_A Bsupi, intracellular pr 82.1 11 0.00037 31.0 9.7 74 42-126 22-100 (120)
141 1cyx_A CYOA; electron transpor 70.9 19 0.00064 32.6 8.9 62 206-286 41-102 (205)
142 2gsm_B Cytochrome C oxidase su 52.6 50 0.0017 31.1 8.6 62 206-286 171-232 (262)
143 3hb3_B Cytochrome C oxidase su 51.3 52 0.0018 31.6 8.6 62 206-286 189-250 (298)
144 3hb3_B Cytochrome C oxidase su 51.1 46 0.0016 32.0 8.1 75 430-536 190-265 (298)
145 2r39_A FIXG-related protein; s 46.4 45 0.0015 27.0 6.4 46 215-270 34-81 (118)
146 1cyx_A CYOA; electron transpor 42.6 50 0.0017 29.7 6.5 73 430-534 42-115 (205)
147 1xwv_A DER F II; beta sheets, 39.7 42 0.0014 27.7 5.2 60 54-114 25-92 (129)
148 2gsm_B Cytochrome C oxidase su 39.4 83 0.0028 29.5 7.9 74 430-535 172-246 (262)
149 1v54_B Cytochrome C oxidase po 35.8 97 0.0033 28.4 7.5 62 206-286 140-201 (227)
150 2c34_A ICP, inhibitor of cyste 33.6 1.8E+02 0.0063 23.3 8.1 68 53-121 14-89 (116)
151 1yew_A Particulate methane mon 31.8 89 0.003 30.6 6.6 77 26-116 250-336 (382)
152 1nep_A EPV20, BNPC2, epididyma 31.1 59 0.002 26.8 4.8 61 54-114 26-94 (130)
153 2p9r_A Alpha-2-M, alpha-2-macr 27.3 1.6E+02 0.0056 22.6 6.7 67 210-282 13-83 (102)
154 2h7w_A Chagasin; beta-strands, 27.1 2.6E+02 0.009 23.0 8.2 65 53-121 32-104 (131)
155 2hj1_A Hypothetical protein; s 25.6 33 0.0011 26.9 2.0 24 43-66 59-82 (97)
156 1fft_B Ubiquinol oxidase; elec 25.0 64 0.0022 31.2 4.4 61 206-285 151-211 (315)
157 2x3c_A Toxic extracellular end 24.4 1.4E+02 0.0047 29.3 6.8 15 100-114 95-109 (343)
158 1v54_B Cytochrome C oxidase po 23.6 1.3E+02 0.0046 27.4 6.2 75 429-535 140-215 (227)
159 1x9u_A Umecyanin; cupredoxin, 23.1 75 0.0026 25.7 3.9 34 504-537 73-107 (116)
160 2wtp_A ORF131 protein, CZCE; m 22.7 30 0.001 28.7 1.3 22 208-229 73-94 (131)
161 2xzz_A Protein-glutamine gamma 22.6 81 0.0028 24.8 3.9 53 62-120 22-78 (102)
162 1xvs_A Protein APAG; MCSG APC2 22.0 90 0.0031 25.7 4.2 49 215-266 31-83 (126)
163 3kmh_A D-lyxose isomerase; cup 22.0 1.7E+02 0.0059 26.8 6.3 51 206-266 129-184 (246)
164 2cio_B Inhibitor of cysteine p 22.0 2.8E+02 0.0095 22.4 7.2 25 53-77 12-36 (121)
165 3rpf_C Molybdopterin convertin 21.7 50 0.0017 24.1 2.4 26 42-67 42-68 (74)
166 2f1e_A Protein APAG; APAG prot 21.2 1E+02 0.0035 25.4 4.3 49 215-266 32-84 (127)
167 1jer_A Cucumber stellacyanin; 20.9 1.2E+02 0.0041 25.4 4.8 34 505-538 77-111 (138)
168 2x3c_A Toxic extracellular end 20.1 3.3E+02 0.011 26.4 8.6 69 214-283 38-127 (343)
No 1
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A*
Probab=100.00 E-value=5.6e-100 Score=825.85 Aligned_cols=509 Identities=30% Similarity=0.576 Sum_probs=405.0
Q ss_pred cceEEEEEEEEEEEeecccceeeEEEECCCCCCCeEeecCCCEEEEEEEeCCC-CCceeeeCCCcccCCCCCCCCCCccC
Q 008799 21 SAVRHYNFTVVMTNMTKLCASKSIVTVNGKFPGPTLHAREDDNVIVRVTNHVK-YNVTIHWHGVRQLRTGWYDGPAYITQ 99 (553)
Q Consensus 21 ~~~~~~~l~~~~~~~~~~g~~~~~~~~NG~~pGP~i~v~~Gd~v~v~l~N~l~-~~~~iH~HG~~~~~~~~~DGv~~~tq 99 (553)
+++|+|+|+|++..+++||.++++|+|||++|||+||+++||+|+|+|+|.|+ ++|+|||||+++.+++|+||+|++||
T Consensus 1 ~~~~~y~~~v~~~~~~~dg~~~~~~~~Ng~~PGP~I~~~~GD~v~v~v~N~l~~~~tsiHwHGl~~~~~~~~DGv~~vtq 80 (552)
T 1aoz_A 1 SQIRHYKWEVEYMFWAPNCNENIVMGINGQFPGPTIRANAGDSVVVELTNKLHTEGVVIHWHGILQRGTPWADGTASISQ 80 (552)
T ss_dssp CCEEEEEEEEEEEEECTTSSCEEEEEETTBSSCCCEEEETTCEEEEEEEECCSSCCBCEEEETCCCTTCGGGSCCBTTTB
T ss_pred CeEEEEEEEEEEEEEcCCCceEEEEEECCccCCCcEEEeCCCEEEEEEEeCCCCCCeeEEeCCCccCCCcccCCCccccc
Confidence 46899999999999999999999999999999999999999999999999998 99999999999999999999999999
Q ss_pred CCCCCCCceEEEEEeCCCCcceEEecChhhhh-ccceeeEEEcCCCCCCCCCCCCCcceEEEEeeeeccCHHHHHHHHHh
Q 008799 100 CPIQPGQSYVYNFTLTGQRGTLLWHAHISWLR-ATVHGAIVILPKRSVPYPFPKADKEKIIVFGEWWKADVEAVINQATQ 178 (553)
Q Consensus 100 ~~i~pG~~~~y~~~~~~~~Gt~wYH~H~~~~~-~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~~~~~~ 178 (553)
|+|+||++|+|+|++ +++||||||||.+.|. +||+|+|||++++....++ .+|+|++|+++||++.+...++.....
T Consensus 81 ~~I~PG~s~tY~f~~-~~~GT~wYHsH~~~q~~~Gl~G~liV~~~~~~~~~~-~~d~e~~l~l~Dw~~~~~~~~~~~~~~ 158 (552)
T 1aoz_A 81 CAINPGETFFYNFTV-DNPGTFFYHGHLGMQRSAGLYGSLIVDPPQGKKEPF-HYDGEINLLLSDWWHQSIHKQEVGLSS 158 (552)
T ss_dssp CCBCTTCEEEEEEEC-CSCEEEEEEECSTTTGGGTCEEEEEEECCTTCCCSS-CCSEEEEEEEEEECSSCHHHHHHHTTS
T ss_pred CCcCCCCeEEEEEEC-CCCEEEEEEECchhHHhccCeeeEEEeCCcccCCCC-CCCccceEEeecccCCCHHHHHhhhhc
Confidence 999999999999999 8999999999999888 8999999999986544444 346899999999999988776644322
Q ss_pred CC-CCCCCCceEEECCcCCCCCCC-------------CCC------CeEEEEEcCCEEEEEEEecCCCceEEEEEcCceE
Q 008799 179 MG-VAPNVSDAHTINGHPGPVTNC-------------TSQ------GFTLHVESGKTYLLRIVNAAVNDELFFKIAGHNL 238 (553)
Q Consensus 179 ~g-~~~~~~~~~~iNG~~~~~~~~-------------~~~------~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~ 238 (553)
.. .....++.++|||+.. ++| +.. .+.++|++|++|||||||+|+.+.+.|+|+||+|
T Consensus 159 ~~~~~~~~~~~~liNG~~~--~~c~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~ 236 (552)
T 1aoz_A 159 KPIRWIGEPQTILLNGRGQ--FDCSIAAKYDSNLEPCKLKGSESCAPYIFHVSPKKTYRIRIASTTALAALNFAIGNHQL 236 (552)
T ss_dssp SSCCCCCSCSEEEETTBCC--SSSBTTGGGCTTSCBCCCCSCSTTSCCCEEECTTCEEEEEEEECCSSCEEEEEETTCCE
T ss_pred ccccCCCCCCeEEECCccc--cCcccCcccccccccccccCCCCCCceEEEEcCCCEEEEEEEcccccceEEEEEcCcEE
Confidence 11 1112458999999974 333 221 1379999999999999999999999999999999
Q ss_pred EEEeeCCCcccceEeeEEEeCCCccEEEEEEe-CCCCCeeEEEEeeccccccccCCccEEEEEEEcCCCCC--CCCccCC
Q 008799 239 TVVEVDSSYTKPFKTDTIFIGPGQTTNALLTA-DKKIGKYLITISPFMDTIVAVNNVTGIAFLRYKGTVAF--SSTTLTN 315 (553)
Q Consensus 239 ~via~DG~~~~p~~~d~~~l~pgeR~dv~v~~-~~~~g~~~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~--~~~~~~~ 315 (553)
+|||+||.+++|+.++++.|+|||||||+|++ ++.+|+|+|++...... .+.....++|+|.+.... +....+.
T Consensus 237 ~vi~~DG~~~~P~~~~~l~i~pgqR~dvlv~~~~~~~g~y~i~~~~~~~~---~~~~~~~ail~y~~~~~~~~p~~~~p~ 313 (552)
T 1aoz_A 237 LVVEADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTRARH---PNTPPGLTLLNYLPNSVSKLPTSPPPQ 313 (552)
T ss_dssp EEEEETTEEEEEEEESCEEECTTCEEEEEEECCSCTTCCEEEEEEEESSC---CCSCCEEEEEEETTSCTTSCCSSCCCC
T ss_pred EEEEECCcccCceEEeEEEEcCCcEEEEEEEcCCCCCCCEEEEEEcccCC---CCCccEEEEEEECCCCCCCCCCCCCCC
Confidence 99999999999999999999999999999999 55579999999865311 234567899999986541 1122233
Q ss_pred CCCCCCcccccccccccccccCCCCCCCCCCCcceEEEEEeeeeccCCccCCCCceeeEeeeceeeecCCchhhhhhhcc
Q 008799 316 VPAINATEVTNTFSDNLRSLNSKRYPAKVPLTVDHSLLLTMAVAVNPCATCPNGTKVGAAMNNISFVMPTTALLQAHYYK 395 (553)
Q Consensus 316 ~p~~~~~~~~~~~~~~l~~l~~~~~p~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~p~~~~~~~~~~~ 395 (553)
.|.+++......+ .++.+..+. +...+..+++++.+.+..+.. + ..+.|++|+++|..|+.+++.+.+.+
T Consensus 314 ~p~~~~~~~~~~~--~l~~l~~~~-~~~~~~~~~~~~~l~~~~~~~------~-~~~~w~iNg~s~~~p~~P~L~~~~~~ 383 (552)
T 1aoz_A 314 TPAWDDFDRSKNF--TYRITAAMG-SPKPPVKFNRRIFLLNTQNVI------N-GYVKWAINDVSLALPPTPYLGAMKYN 383 (552)
T ss_dssp CCCTTCHHHHHHH--HTTCCBCTT-CCCCCSSCSEEEEEEEEEEEE------T-TEEEEEETTEEECCCSSCHHHHHHTT
T ss_pred CCccccccccccc--cccccccCC-CCCCCCCCcEEEEEEEeeccC------C-CeEEEEECCCccCCCCCCHHHHHhhc
Confidence 4444432221111 133332222 334556678888777665431 1 25679999999999988888877766
Q ss_pred ccccccCCCCCCCCe-eeccCCCCCCccccCCCeeEEEecCCCEEEEEEEcCCCCC---CCCCCeeecCCceEEEeeCCC
Q 008799 396 ISGVFTDDFPAKPPI-AFNYTGNYTGTLQTTNGTRLYRLAYNSTVQLVLQGTTVIA---PENHPTHLHGFNFFAVGKGSG 471 (553)
Q Consensus 396 ~~~~~~~~~~~~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~i~n~~~~~---~~~HP~HlHG~~f~Vl~~g~g 471 (553)
+++.|..+++..++. .+++... ..+...+.++.++.++.|++|+|+|+|.+.+. ...||||||||+||||+++.|
T Consensus 384 ~~g~~~~~~p~~~~~~~~~~~~~-~~~~~~~~~t~~~~~~~g~~v~ivi~N~~~~~~~~~~~HP~HLHGh~F~Vl~~g~G 462 (552)
T 1aoz_A 384 LLHAFDQNPPPEVFPEDYDIDTP-PTNEKTRIGNGVYQFKIGEVVDVILQNANMMKENLSETHPWHLHGHDFWVLGYGDG 462 (552)
T ss_dssp CTTSSCCSCCCSCCCTTCCTTSC-CCCTTCEEECCCEEECTTCEEEEEEEECCCSSTTCCCCEEEEETTCCEEEEEEEES
T ss_pred CccccccCCCccccccccccccc-cccccccccceEEEecCCCEEEEEEeCCcccccccCCCCCEEEcCCceEEEecccC
Confidence 667666555543221 1222211 11122234567789999999999999976433 567999999999999999989
Q ss_pred CCCCCCCCCCCCCCCCCcceeeEecCCcEEEEEEEecCceeeEEeecchhhHhccceEEEEEeCCCCCCCCCCCCCCCCC
Q 008799 472 NFDPNKDPQKFNLVDPVERNTISVPTAGWTAIRFRADNPGVWFLHCHLEVHTSWGLKMAFVVDNGKGPNESLIPPPSDLP 551 (553)
Q Consensus 472 ~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~adnpG~w~~HCHil~H~d~GM~~~~~V~~~~~~~~~~~~~p~~~~ 551 (553)
.|++ .+...+|+.+|.|||||.||+++|++|||+|||||.|+|||||+||++.|||++|.|.+. +++++|.+++
T Consensus 463 ~~~~-~~~~~~n~~~p~~RDTv~vpp~g~v~Irf~aDNPG~W~~HCHi~~H~~~GM~~~~~~~~~-----~~~~~P~~~~ 536 (552)
T 1aoz_A 463 KFSA-EEESSLNLKNPPLRNTVVIFPYGWTAIRFVADNPGVWAFHCHIEPHLHMGMGVVFAEGVE-----KVGRIPTKAL 536 (552)
T ss_dssp SCCG-GGGGGSCCSSCCEESEEEECTTEEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEECGG-----GCCCCCHHHH
T ss_pred ccCc-ccccccccCCCCccCeEEeCCCceEEEEEEcCCCeEEEEEeeehhHhhCCCeEEEEeCch-----hhccCCcchh
Confidence 8887 445578899999999999999999999999999999999999999999999999987642 5677899999
Q ss_pred CC
Q 008799 552 TC 553 (553)
Q Consensus 552 ~c 553 (553)
+|
T Consensus 537 ~C 538 (552)
T 1aoz_A 537 AC 538 (552)
T ss_dssp SS
T ss_pred hh
Confidence 99
No 2
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada}
Probab=100.00 E-value=1.9e-95 Score=783.45 Aligned_cols=466 Identities=29% Similarity=0.484 Sum_probs=371.6
Q ss_pred ccceEEEEEEEEEEEeecccceeeEEEECCCCCCCeEeecCCCEEEEEEEeCCC-CCceeeeCCCcccCCCCCCCCCCcc
Q 008799 20 ESAVRHYNFTVVMTNMTKLCASKSIVTVNGKFPGPTLHAREDDNVIVRVTNHVK-YNVTIHWHGVRQLRTGWYDGPAYIT 98 (553)
Q Consensus 20 ~~~~~~~~l~~~~~~~~~~g~~~~~~~~NG~~pGP~i~v~~Gd~v~v~l~N~l~-~~~~iH~HG~~~~~~~~~DGv~~~t 98 (553)
.+++|+|+|+|++..+++||.++.+|+|||++|||+||+++||+|+|+|+|+|+ ++|+|||||+++.+++|+||+|++|
T Consensus 64 ~~~~~~~~l~v~~~~~~pdG~~~~~~~~NG~~PGP~I~~~~GD~v~V~v~N~l~~~~tsIHwHGl~~~~t~~~DGvp~vT 143 (580)
T 3sqr_A 64 TGVTREYWLSVENSTITPDGYTRSAMTFNGTVPGPAIIADWGDNLIIHVTNNLEHNGTSIHWHGIRQLGSLEYDGVPGVT 143 (580)
T ss_dssp CCCEEEEEEEEEEEEECSSSBCEEEEEETTBSSCCCEEEETTCEEEEEEEECCSSCCBCEEETTCCCTTCGGGSCCBTTT
T ss_pred CceEEEEEEEEEEEEecCCCeEEEEEEECCccCCceEEEeCCCEEEEEEEECCCCCcceEEecccccCCCccccCCCccc
Confidence 467899999999999999999999999999999999999999999999999998 8999999999999999999999999
Q ss_pred CCCCCCCCceEEEEEeCCCCcceEEecChhhhh-ccceeeEEEcCCCCCCCCCCCCCcce-EEEEeeeeccCHHHHHHHH
Q 008799 99 QCPIQPGQSYVYNFTLTGQRGTLLWHAHISWLR-ATVHGAIVILPKRSVPYPFPKADKEK-IIVFGEWWKADVEAVINQA 176 (553)
Q Consensus 99 q~~i~pG~~~~y~~~~~~~~Gt~wYH~H~~~~~-~Gl~G~liV~~~~~~~~~~~~~~~e~-~l~~~d~~~~~~~~~~~~~ 176 (553)
||+|+||++|+|+|++ .++||||||||...|+ +||+|+|||+++... .+|.|. +|+++||++.+..+++...
T Consensus 144 q~pI~PG~sftY~f~~-~q~GT~WYHsH~~~q~~~GL~G~lIV~~p~~~-----~yD~d~~~l~l~Dw~~~~~~~~~~~~ 217 (580)
T 3sqr_A 144 QCPIAPGDTLTYKFQV-TQYGTTWYHSHFSLQYGDGLFGPLIINGPATA-----DYDEDVGVIFLQDWAHESVFEIWDTA 217 (580)
T ss_dssp BCCBCTTCEEEEEEEC-CCCEEEEEEECSTTGGGGTCEEEEEEECCCSS-----CCSEEEEEEEEEEECSSCHHHHHHHH
T ss_pred cCCCCCCCeEEEEEEC-CCCcceEEeecccccccCcCEEEEEeeCcccC-----CCCccceEEEEEEEecCCHHHHHHHH
Confidence 9999999999999999 7999999999999998 899999999988653 357787 9999999999988877665
Q ss_pred HhCCCCCCCCceEEECCcCCCCCCCCC----------CCeEEEEEcCCEEEEEEEecCCCceEEEEEcCceEEEEeeCCC
Q 008799 177 TQMGVAPNVSDAHTINGHPGPVTNCTS----------QGFTLHVESGKTYLLRIVNAAVNDELFFKIAGHNLTVVEVDSS 246 (553)
Q Consensus 177 ~~~g~~~~~~~~~~iNG~~~~~~~~~~----------~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~ 246 (553)
... .+..+++++|||+.. ++|+. ..+.++|++|++|||||||+|....+.|+|+||+|+|||+||.
T Consensus 218 ~~~--~~~~~d~~liNG~~~--~~c~~~~~~~~~~~~~~~~~~v~~G~~yRlRlINa~~~~~~~~~i~gh~~~VIa~DG~ 293 (580)
T 3sqr_A 218 RLG--APPALENTLMNGTNT--FDCSASTDPNCVGGGKKFELTFVEGTKYRLRLINVGIDSHFEFAIDNHTLTVIANDLV 293 (580)
T ss_dssp TTS--CCCCBSEEEETTBCC--CCCTTCCCTTBCCCCCCCEEECCTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTE
T ss_pred hcc--CCCCCceEEECCccc--CCCccccccccccCCCceeEEEcCCCEEEEEEEeccCCceeeEEeCCceEEEEEeCCc
Confidence 432 345679999999964 45542 1389999999999999999999999999999999999999999
Q ss_pred cccceEeeEEEeCCCccEEEEEEeCCCCCeeEEEEeeccccccccCCccEEEEEEEcCCCCCCCCccCCCCCCCCccccc
Q 008799 247 YTKPFKTDTIFIGPGQTTNALLTADKKIGKYLITISPFMDTIVAVNNVTGIAFLRYKGTVAFSSTTLTNVPAINATEVTN 326 (553)
Q Consensus 247 ~~~p~~~d~~~l~pgeR~dv~v~~~~~~g~~~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~p~~~~~~~~~ 326 (553)
+++|+.+++|.|+|||||||+|++++.+|+|||++....++.....+....|||+|.++.... |..+.+.....+.
T Consensus 294 ~v~P~~~~~l~i~pGqRydVlv~a~~~~g~Y~i~a~~~~~~~~~~~~~~~~aiL~Y~~~~~~~----P~~~~~~~~~~~~ 369 (580)
T 3sqr_A 294 PIVPYTTDTLLIGIGQRYDVIVEANAAADNYWIRGNWGTTCSTNNEAANATGILRYDSSSIAN----PTSVGTTPRGTCE 369 (580)
T ss_dssp EEEEEEESSEEECTTCEEEEEEECCSCSSEEEEECCCCTTTSCBTTGGGCEEEEESSTTCCCC----CCCCCCCCCCCSC
T ss_pred cCCceEeeEEEEccceEEEEEEEeCCCCCeEEEEEecccccCccCCCCceEEEEEECCCCCCC----CCCCCCCccchhh
Confidence 999999999999999999999999988899999998754432112334679999998764322 2222222211111
Q ss_pred ccccccccccCCCCCCCCCCCcceEEEEEeeeeccCCccCCCCceeeEeeeceeeec-CCchhhhhhhccccccccCCCC
Q 008799 327 TFSDNLRSLNSKRYPAKVPLTVDHSLLLTMAVAVNPCATCPNGTKVGAAMNNISFVM-PTTALLQAHYYKISGVFTDDFP 405 (553)
Q Consensus 327 ~~~~~l~~l~~~~~p~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~-p~~~~~~~~~~~~~~~~~~~~~ 405 (553)
. ..+..| .|..+..+|...+.++.+.++ .+..+.|++|+++|.. ++.+++...+. +. .+++
T Consensus 370 ~--~~~~~L-~P~~~~~~~~~~~~~~~l~~~----------~~~~~~w~iN~~s~~~~~~~P~L~~~~~---g~--~~~~ 431 (580)
T 3sqr_A 370 D--EPVASL-VPHLALDVGGYSLVDEQVSSA----------FTNYFTWTINSSSLLLDWSSPTTLKIFN---NE--TIFP 431 (580)
T ss_dssp C--SCGGGC-CBSSCCBCCSEEEEEEEEEEE----------ESSSEEEEETTBCCCCCTTSCHHHHHHT---TC--CCCC
T ss_pred c--cccccc-ccCCCCCCCCccceEEEEEec----------cCCceeEEECCEecccCCCCCchhhhhc---CC--ccCC
Confidence 1 111111 122223334334444433332 1246789999999974 45555544221 10 1221
Q ss_pred CCCCeeeccCCCCCCccccCCCeeEEEe----cCCCEEEEEEEcCCCCCCCCCCeeecCCceEEEeeCCCCCCCCCCCCC
Q 008799 406 AKPPIAFNYTGNYTGTLQTTNGTRLYRL----AYNSTVQLVLQGTTVIAPENHPTHLHGFNFFAVGKGSGNFDPNKDPQK 481 (553)
Q Consensus 406 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~----~~g~~v~~~i~n~~~~~~~~HP~HlHG~~f~Vl~~g~g~~~~~~~~~~ 481 (553)
. ...++.+ +.|++|||+|+|.+.. ...||||||||+|+||++|.|.|++..+...
T Consensus 432 ~--------------------~~~~~~~~~~~~~~~~VeiVi~n~~~~-~~~HP~HLHGh~F~vv~~g~G~f~~~~~~~~ 490 (580)
T 3sqr_A 432 T--------------------EYNVVALEQTNANEEWVVYVIEDLTGF-GIWHPIHLHGHDFFIVAQETDVFNSDESPAK 490 (580)
T ss_dssp G--------------------GGCEEEECC----CCEEEEEEEECSSS-CCCEEEEESSCCEEEEEEESSCCCTTTSGGG
T ss_pred C--------------------CcceeecccccCCCcEEEEEEeCCCcc-ccceeeEecCceEEEEecCCCccCccccccc
Confidence 1 1223444 4699999999996522 5689999999999999999999998776778
Q ss_pred CCCCCCCcceeeEecCCcEEEEEEEecCceeeEEeecchhhHhccceEEEEEeCCCC
Q 008799 482 FNLVDPVERNTISVPTAGWTAIRFRADNPGVWFLHCHLEVHTSWGLKMAFVVDNGKG 538 (553)
Q Consensus 482 ~~~~~p~~rDTv~vp~~g~~~irf~adnpG~w~~HCHil~H~d~GM~~~~~V~~~~~ 538 (553)
+|+.||.+||||.|+++||++|||++||||.|+|||||+||++.||+++|.+++.+.
T Consensus 491 ~nl~nP~~rDTv~v~~~g~~~irf~adNPG~W~~HCHi~~H~~~Gm~~~~~e~~~~i 547 (580)
T 3sqr_A 491 FNLVNPPRRDVAALPGNGYLAIAFKLDNPGSWLLHCHIAWHASEGLAMQFVESQSSI 547 (580)
T ss_dssp CCCBSCCEESEEEECTTSEEEEEEESCSCEEEEEEECSHHHHHTTCEEEEEESGGGC
T ss_pred cccCCCceeeEEEeCCCceEEEEEEcCCCeeeEEEECcHHHhhCCCcEEEEECHHHH
Confidence 999999999999999999999999999999999999999999999999998865433
No 3
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3
Probab=100.00 E-value=1.9e-94 Score=776.01 Aligned_cols=490 Identities=29% Similarity=0.476 Sum_probs=362.1
Q ss_pred HHHHHHHhhcccccccceEEEEEEEEEEEeecccc-eeeEEEECCCCCCCeEeecCCCEEEEEEEeCCC-----CCceee
Q 008799 6 RAILLATFMFPALVESAVRHYNFTVVMTNMTKLCA-SKSIVTVNGKFPGPTLHAREDDNVIVRVTNHVK-----YNVTIH 79 (553)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~-~~~~~~~NG~~pGP~i~v~~Gd~v~v~l~N~l~-----~~~~iH 79 (553)
++..|++++++.+..+..++|+|++++..+++||. .+++|+|||++|||+||+++||+|+|+|+|+|+ ++|+||
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~dg~~~~~~~~~NG~~PGP~i~~~~Gd~v~v~v~N~l~~~~~~~~tsiH 85 (521)
T 1v10_A 6 SLKSLVVLSLTSLSLAATVALDLHILNANLDPDGTGARSAVTAEGTTIAPLITGNIDDRFQINVIDQLTDANMRRATSIH 85 (521)
T ss_dssp ----------------CCSEEEEEEEEEEECTTSSCCEEEEEESSSSSCCCEEEETTCEEEEEEEECCCCTTSCCCBCEE
T ss_pred HHHHHHHHHhhhhhcccCceEEEEEEEEEEcCCCcceEEEEEECCccCCCcEEEeCCCEEEEEEEECCCCccCCCCceEe
Confidence 33333444444556677899999999999999999 999999999999999999999999999999998 999999
Q ss_pred eCCCcccCCCCCCCCCCccCCCCCCCCceEEEEEeCCCCcceEEecChhhhh-ccceeeEEEcCCCCC-CCCCCCCCcce
Q 008799 80 WHGVRQLRTGWYDGPAYITQCPIQPGQSYVYNFTLTGQRGTLLWHAHISWLR-ATVHGAIVILPKRSV-PYPFPKADKEK 157 (553)
Q Consensus 80 ~HG~~~~~~~~~DGv~~~tq~~i~pG~~~~y~~~~~~~~Gt~wYH~H~~~~~-~Gl~G~liV~~~~~~-~~~~~~~~~e~ 157 (553)
|||+++.+++|+||+|++|||+|.||++|+|+|++.+++||||||||.+.|. +||+|+|||+++.+. ..+++..++|+
T Consensus 86 wHGl~~~~~~~~DGv~~vtq~~I~PG~s~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~d~~e~ 165 (521)
T 1v10_A 86 WHGFFQAGTTEMDGPAFVNQCPIIPNESFVYDFVVPGQAGTYWYHSHLSTQYCDGLRGAFVVYDPNDPHLSLYDVDDAST 165 (521)
T ss_dssp EETCCCTTCGGGSCCBTTTBCCBCTTEEEEEEEECTTCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSGGG
T ss_pred cCCeeccCCCccCCCcceeeCCcCCCCeEEEEEecCCCCccEEEEeccCCchhcCceEEEEEcCCcccccccCCCCCcee
Confidence 9999999889999999999999999999999999768999999999999988 899999999987632 12233334799
Q ss_pred EEEEeeeeccCHHHHHHHHHhCCCCCCCCceEEECCcCCCCCCCC---CCCeEEEEEcCCEEEEEEEecCCCceEEEEEc
Q 008799 158 IIVFGEWWKADVEAVINQATQMGVAPNVSDAHTINGHPGPVTNCT---SQGFTLHVESGKTYLLRIVNAAVNDELFFKIA 234 (553)
Q Consensus 158 ~l~~~d~~~~~~~~~~~~~~~~g~~~~~~~~~~iNG~~~~~~~~~---~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~ 234 (553)
+|+++||+++...++... .+.....++.++|||+.. +.|. ...+.++|++|++|||||||+|+.+.+.|+|+
T Consensus 166 ~l~l~D~~~~~~~~~~~~---~~~~~~~~d~~liNG~~~--~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~ 240 (521)
T 1v10_A 166 VITIADWYHSLSTVLFPN---PNKAPPAPDTTLINGLGR--NSANPSAGQLAVVSVQSGKRYRFRIVSTSCFPNYAFSID 240 (521)
T ss_dssp EEEEEEECSSCCC----------CCCSCCSEEEETTBCC--CSSCGGGSCCCEEEECTTCEEEEEEEECCSSCCEEEEET
T ss_pred EEEEcccccCCHHHHhhc---cCCCCCCCCEEEECCccc--CCCCCCCCCceEEEECCCCEEEEEEEecCCcccEEEEEC
Confidence 999999999876554321 122234579999999974 4564 12289999999999999999999999999999
Q ss_pred CceEEEEeeCCCcccceEeeEEEeCCCccEEEEEEeCCCCCeeEEEEeeccccccccCCccEEEEEEEcCCCCCCCCccC
Q 008799 235 GHNLTVVEVDSSYTKPFKTDTIFIGPGQTTNALLTADKKIGKYLITISPFMDTIVAVNNVTGIAFLRYKGTVAFSSTTLT 314 (553)
Q Consensus 235 gh~~~via~DG~~~~p~~~d~~~l~pgeR~dv~v~~~~~~g~~~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~ 314 (553)
||+|+||++||.+++|+.++++.|+|||||||+|++++.+|+|+|++....... .+......++|+|.+.....+.
T Consensus 241 gh~~~vi~~DG~~~~p~~~~~l~l~pgqR~dvlv~~~~~~g~y~i~~~~~~~~~-~~~~~~~~ail~y~~~~~~~p~--- 316 (521)
T 1v10_A 241 GHRMTVIEVDGVSHQPLTVDSLTIFAGQRYSVVVEANQAVGNYWIRANPSNGRN-GFTGGINSAIFRYQGAAVAEPT--- 316 (521)
T ss_dssp TCCEEEEEETTEEEEEEEESBEEECTTCEEEEEEECCSCSSEEEEEEEESSSSC-SCGGGTTEEEEEETTCCSCCCC---
T ss_pred CCeEEEEecCCccccceeeeeEEEcccceEEEEEEcCCCCCceeeeeccccccc-cCCCCceeEEEEECCCCCCCCC---
Confidence 999999999999999999999999999999999999987799999998653211 1222234699999976543211
Q ss_pred CCCCCCCcccccccccccccccCCCCCC-CCCCCcceEEEEEeeeeccCCccCCCCceeeEeeeceeeecCCchhhhhhh
Q 008799 315 NVPAINATEVTNTFSDNLRSLNSKRYPA-KVPLTVDHSLLLTMAVAVNPCATCPNGTKVGAAMNNISFVMPTTALLQAHY 393 (553)
Q Consensus 315 ~~p~~~~~~~~~~~~~~l~~l~~~~~p~-~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~p~~~~~~~~~ 393 (553)
.+...... . ...++.++.....|. ..+...+.++.+++.. ++..+.|++||++|..+..+++.+..
T Consensus 317 -~~~~~~~~--~-~~~~l~p~~~~~~p~~~~~~~~~~~~~l~~~~---------~~~~~~~~iNg~~~~~~~~P~l~~~~ 383 (521)
T 1v10_A 317 -TSQNSGTA--L-NEANLIPLINPGAPGNPVPGGADINLNLRIGR---------NATTADFTINGAPFIPPTVPVLLQIL 383 (521)
T ss_dssp -CCCCCSCB--C-CGGGCCBSSCCCCSSCSSTTCSSEEEECCEEC---------CSSSSCCEESSCCCCCCSSCHHHHHH
T ss_pred -CCCCcccc--c-chhhcccCCcccCCCcccCCcceEEEEEEEec---------CCceeEEEECCCcccCCCCchhhhhh
Confidence 11000000 0 011233332222221 1122344444333222 22234699999999888766554422
Q ss_pred ccccccccCCCCCCCCeeeccCCCCCCccccCCCeeEEEecCCCEEEEEEEcCCCCCCCCCCeeecCCceEEEeeCCCCC
Q 008799 394 YKISGVFTDDFPAKPPIAFNYTGNYTGTLQTTNGTRLYRLAYNSTVQLVLQGTTVIAPENHPTHLHGFNFFAVGKGSGNF 473 (553)
Q Consensus 394 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~i~n~~~~~~~~HP~HlHG~~f~Vl~~g~g~~ 473 (553)
. +.+.. .....+..++.++.|++|||+++| .+.||||||||+|||++++.+.
T Consensus 384 ~---g~~~~-------------------~~~~~~~~~~~v~~g~~vei~l~N-----~~~HP~HLHGh~F~Vl~~~~~~- 435 (521)
T 1v10_A 384 S---GVTNP-------------------NDLLPGGAVISLPANQVIEISIPG-----GGNHPFHLHGHNFDVVRTPGSS- 435 (521)
T ss_dssp H---TCCCG-------------------GGSSSTTTEEEECTTCEEEEEEEC-----CBSCEEEESSCCEEEEECTTCS-
T ss_pred c---CCccc-------------------ccCCCCceEEEecCCCEEEEEEcC-----CCCCCEEEccceEEEEecCCCC-
Confidence 1 11100 001234567899999999999998 3589999999999999997542
Q ss_pred CCCCCCCCCCCCCCCcceeeEe-cCCcEEEEEEEecCceeeEEeecchhhHhccceEEEEEeCCCCCCCCCCCCCCCCCC
Q 008799 474 DPNKDPQKFNLVDPVERNTISV-PTAGWTAIRFRADNPGVWFLHCHLEVHTSWGLKMAFVVDNGKGPNESLIPPPSDLPT 552 (553)
Q Consensus 474 ~~~~~~~~~~~~~p~~rDTv~v-p~~g~~~irf~adnpG~w~~HCHil~H~d~GM~~~~~V~~~~~~~~~~~~~p~~~~~ 552 (553)
.+++.+|.|||||.| |+++|++|||++||||.|+|||||++|++.|||++|.|.+.+.. +..+.|+.+.+.
T Consensus 436 -------~~n~~~p~~rDTV~V~p~gg~v~Irf~aDNPG~W~~HCHi~~H~~~GM~~~~~v~~~~~~-~~~~~p~~~~~~ 507 (521)
T 1v10_A 436 -------VYNYVNPVRRDVVSIGGGGDNVTFRFVTDNPGPWFLHCHIDWHLEAGLAVVFAEDIPNIP-IANAISPAWDDL 507 (521)
T ss_dssp -------CCCCSSCCEESEEECCBSSCEEEEEEECCSCEEEEEEESCHHHHTTTCEEEEEESGGGHH-HHSCCCHHHHTH
T ss_pred -------ccccCCCCeeeeEEeCCCCcEEEEEEEeCCCeeEEEeeChHHHHhCCCeEEEEECCcchh-hccCCChHHhhh
Confidence 357889999999999 89999999999999999999999999999999999998765432 222233345677
Q ss_pred C
Q 008799 553 C 553 (553)
Q Consensus 553 c 553 (553)
|
T Consensus 508 C 508 (521)
T 1v10_A 508 C 508 (521)
T ss_dssp H
T ss_pred c
Confidence 6
No 4
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.7e-93 Score=767.81 Aligned_cols=477 Identities=27% Similarity=0.424 Sum_probs=369.4
Q ss_pred ceEEEEEEEEEEEeeccc-ceeeEEEECCCCCCCeEeecCCCEEEEEEEeCCC-CCceeeeCCCcccCCCCCCCCCCccC
Q 008799 22 AVRHYNFTVVMTNMTKLC-ASKSIVTVNGKFPGPTLHAREDDNVIVRVTNHVK-YNVTIHWHGVRQLRTGWYDGPAYITQ 99 (553)
Q Consensus 22 ~~~~~~l~~~~~~~~~~g-~~~~~~~~NG~~pGP~i~v~~Gd~v~v~l~N~l~-~~~~iH~HG~~~~~~~~~DGv~~~tq 99 (553)
++|+|+|+|++..+++|| .++++|+|||++|||+||+++||+|+|+|+|.|+ ++|+|||||+++.+++|+||+|++||
T Consensus 1 ~~~~~~~~v~~~~~~pdG~~~~~~~~~Ng~~PGP~i~~~~Gd~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG~~~vtq 80 (534)
T 1zpu_A 1 ETHTFNWTTGWDYRNVDGLKSRPVITCNGQFPWPDITVNKGDRVQIYLTNGMNNTNTSMHFHGLFQNGTASMDGVPFLTQ 80 (534)
T ss_dssp CEEEEEEEEEEEEECSSSSCCEEEEEETTBSSCCCEEEETTCEEEEEEECCCSSCCBCCEEETCCCTTCGGGSCCBTTTB
T ss_pred CEEEEEEEEEEEEecCCCCceEEEEEECCccCCccEEEECCCEEEEEEEeCCCCCCeeEEcCCcccCCCCcccCCCcccc
Confidence 478999999999999999 8999999999999999999999999999999998 99999999999998899999999999
Q ss_pred CCCCCCCceEEEEEeCCCCcceEEecChhhhh-ccceeeEEEcCCCCCCCCCCCCCcceEEEEeeeeccCHHHHHHHHHh
Q 008799 100 CPIQPGQSYVYNFTLTGQRGTLLWHAHISWLR-ATVHGAIVILPKRSVPYPFPKADKEKIIVFGEWWKADVEAVINQATQ 178 (553)
Q Consensus 100 ~~i~pG~~~~y~~~~~~~~Gt~wYH~H~~~~~-~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~~~~~~ 178 (553)
|+|+||++|+|+|++.+++||||||||.+.|. +||+|+|||+++.+ |+ .+|+|++|+++||++++..++......
T Consensus 81 ~pI~PG~~~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~~---p~-~~d~e~~l~l~Dw~~~~~~~~~~~~~~ 156 (534)
T 1zpu_A 81 CPIAPGSTMLYNFTVDYNVGTYWYHSHTDGQYEDGMKGLFIIKDDSF---PY-DYDEELSLSLSEWYHDLVTDLTKSFMS 156 (534)
T ss_dssp CCBCTTCEEEEEEECSSCCEEEEEECCSSSGGGGTCEEEEEEECTTC---CS-CCSEEEEEEEEEECSSCHHHHHHHHSS
T ss_pred CCcCCCCeEEEEEEeCccceeEEEEEcCcccccCcceeeEEeCCCCC---CC-CCcceEEEEeeccccCCHHHHHHHHhc
Confidence 99999999999999966999999999999998 89999999999864 22 458899999999999988877655432
Q ss_pred C---CCCCCCCceEEECCcCCCCCCCCCCCeEEEEEcCCEEEEEEEecCCCceEEEEEcCceEEEEeeCCCcccceEeeE
Q 008799 179 M---GVAPNVSDAHTINGHPGPVTNCTSQGFTLHVESGKTYLLRIVNAAVNDELFFKIAGHNLTVVEVDSSYTKPFKTDT 255 (553)
Q Consensus 179 ~---g~~~~~~~~~~iNG~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~~p~~~d~ 255 (553)
. .+....++.++|||+.. +.++|++||+|||||||+|+.+.+.|+|+||+|+|||+||.+++|+.+++
T Consensus 157 ~~~~~g~~~~~d~~liNG~~~---------~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~vi~~DG~~~~P~~~~~ 227 (534)
T 1zpu_A 157 VYNPTGAEPIPQNLIVNNTMN---------LTWEVQPDTTYLLRIVNVGGFVSQYFWIEDHEMTVVEIDGITTEKNVTDM 227 (534)
T ss_dssp TTCTTCCCCCCSEEEETTBSS---------CEEECCSSCEEEEEEEECCSSCCEEEEETTBCEEEEEETTEEEEEEEESC
T ss_pred cccCCCCCCCCceEEECCCCc---------eEEEEECCCEEEEEEEeccCCceEEEEEcCCeeEEEeccCcCccccEece
Confidence 1 12334679999999976 88999999999999999999999999999999999999999999999999
Q ss_pred EEeCCCccEEEEEEeCCC-CCeeEEEEeecccccc---ccCCccEEEEEEEcCCCCCCCC-ccCCCCC-CCCcccccccc
Q 008799 256 IFIGPGQTTNALLTADKK-IGKYLITISPFMDTIV---AVNNVTGIAFLRYKGTVAFSST-TLTNVPA-INATEVTNTFS 329 (553)
Q Consensus 256 ~~l~pgeR~dv~v~~~~~-~g~~~i~~~~~~~~~~---~~~~~~~~ail~y~~~~~~~~~-~~~~~p~-~~~~~~~~~~~ 329 (553)
|.|+|||||||+|++++. .|.|+|++.....+.. ........++|+|.+....+.+ .....+. .++
T Consensus 228 l~l~~gqR~dvlv~~~~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~~p~~~~~~~~~~~~~~-------- 299 (534)
T 1zpu_A 228 LYITVAQRYTVLVHTKNDTDKNFAIMQKFDDTMLDVIPSDLQLNATSYMVYNKTAALPTQNYVDSIDNFLDD-------- 299 (534)
T ss_dssp EEECTTCEEEEEEECCSCSSCCEEEEEEECGGGSSSCCTTCCCEEEEEEESCTTSCBCCCCCCSCSSCSCCG--------
T ss_pred EEECccceEEEEEEcCCCCCCcEEEEEeccccccccCCCCCCcceEEEEEeCCCCCCCCCCccccccccccc--------
Confidence 999999999999999864 3789999875432110 1123456899999875432111 0111111 000
Q ss_pred cccccccCCCCCCCCCCCcceEEEEEeeeeccCCccCCCCceeeEeeeceeeecCCchhhhhhhccccccccCCCCCCCC
Q 008799 330 DNLRSLNSKRYPAKVPLTVDHSLLLTMAVAVNPCATCPNGTKVGAAMNNISFVMPTTALLQAHYYKISGVFTDDFPAKPP 409 (553)
Q Consensus 330 ~~l~~l~~~~~p~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~p 409 (553)
..++++.. ..++..+++++.+.+.+... .++ ...|++||++|..|+.+++...+.. +.+. ..+.
T Consensus 300 ~~l~p~~~----~~~~~~~~~~~~l~~~~~~~-----~~~-~~~~~iNg~s~~~~~~P~L~~~~~~--~~~~----~~~~ 363 (534)
T 1zpu_A 300 FYLQPYEK----EAIYGEPDHVITVDVVMDNL-----KNG-VNYAFFNNITYTAPKVPTLMTVLSS--GDQA----NNSE 363 (534)
T ss_dssp GGCCBSSC----CCCCCSCSEEEEEEEEEEEC-----TTS-CEEEEETTBCCCCCSSCHHHHHTTS--GGGT----TCGG
T ss_pred ccceeCCC----CCCCCCCCeEEEEEEEeecc-----CCc-eeEEEECCCcccCCCCCceeeeccc--Cccc----CCCc
Confidence 11222211 12334567887777665421 122 2358999999998877665432111 1110 0000
Q ss_pred eeeccCCCCCCccccCCCeeEEEecCCCEEEEEEEcCCCCCCCCCCeeecCCceEEEeeCCC----------CCCCCCCC
Q 008799 410 IAFNYTGNYTGTLQTTNGTRLYRLAYNSTVQLVLQGTTVIAPENHPTHLHGFNFFAVGKGSG----------NFDPNKDP 479 (553)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~i~n~~~~~~~~HP~HlHG~~f~Vl~~g~g----------~~~~~~~~ 479 (553)
....+..++.++.|++|+|+|+|.+ .+.||||||||+||||+++.+ .|++.. .
T Consensus 364 -------------~~~~~~~~~~~~~g~~v~ivi~N~~---~~~HP~HLHGh~F~Vl~~~~~~~~~~~G~p~~~~~~~-~ 426 (534)
T 1zpu_A 364 -------------IYGSNTHTFILEKDEIVEIVLNNQD---TGTHPFHLHGHAFQTIQRDRTYDDALGEVPHSFDPDN-H 426 (534)
T ss_dssp -------------GGCSSSCEEEECTTCEEEEEEEECS---SSCEEEEETTCCEEEEEECCCCCGGGTCCCCCCBTTB-C
T ss_pred -------------ccCCCceEEEeCCCCEEEEEEeCCC---CCCCCeEecCCceEEEeecCCccccccCcccccCccc-c
Confidence 1122456788999999999999964 678999999999999999854 344321 1
Q ss_pred CCCCCCCCCcceeeEecCCcEEEEEEEecCceeeEEeecchhhHhccceEEEEEeCCCCCCC-CCCCCCCCCCCC
Q 008799 480 QKFNLVDPVERNTISVPTAGWTAIRFRADNPGVWFLHCHLEVHTSWGLKMAFVVDNGKGPNE-SLIPPPSDLPTC 553 (553)
Q Consensus 480 ~~~~~~~p~~rDTv~vp~~g~~~irf~adnpG~w~~HCHil~H~d~GM~~~~~V~~~~~~~~-~~~~~p~~~~~c 553 (553)
.....+|.|||||.|++++|++|||++||||.|+|||||+||++.|||++|.|.+.+.... .++.|+...+.|
T Consensus 427 -~~~~~~p~~RDTv~V~pgg~v~IrF~aDNPG~W~~HCHi~~H~~~GM~~~~~~~~~~~~~~~~~~~p~~~~~~C 500 (534)
T 1zpu_A 427 -PAFPEYPMRRDTLYVRPQSNFVIRFKADNPGVWFFHCHIEWHLLQGLGLVLVEDPFGIQDAHSQQLSENHLEVC 500 (534)
T ss_dssp -CCCCSSCEEESEEEECTTCEEEEEEECCSCEEEEEEECCHHHHHTTCEEEEEECHHHHHHCGGGSCCHHHHHHH
T ss_pred -ccccCCCCeeeEEEeCCCCEEEEEEEeCCCeeEEEEeCchhHhhcCCeEEEEECccccccccccCCChhHhhhh
Confidence 1225689999999999999999999999999999999999999999999998865432111 034444444444
No 5
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A*
Probab=100.00 E-value=1.4e-92 Score=753.18 Aligned_cols=456 Identities=29% Similarity=0.480 Sum_probs=356.0
Q ss_pred eEEEEEEEEEEEeecccceeeEEEECCCCCCCeEeecCCCEEEEEEEeCCCC-----CceeeeCCCcccCCCCCCCCCCc
Q 008799 23 VRHYNFTVVMTNMTKLCASKSIVTVNGKFPGPTLHAREDDNVIVRVTNHVKY-----NVTIHWHGVRQLRTGWYDGPAYI 97 (553)
Q Consensus 23 ~~~~~l~~~~~~~~~~g~~~~~~~~NG~~pGP~i~v~~Gd~v~v~l~N~l~~-----~~~iH~HG~~~~~~~~~DGv~~~ 97 (553)
...|+|+|++..+++||+.+.+|+|||++|||+||+++||+|+|+|+|.|++ +|+|||||+++..++|+||++++
T Consensus 4 ~~~~~l~i~~~~~~pdg~~~~~~~~NG~~PGP~I~~~~GD~v~v~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~v 83 (495)
T 3t6v_A 4 GPVTDLHIVNADIVPDGFVRPAVNAGGTFPGPVIAGNVGDNFQIVTFNQLIECSMLVDTSIHWHGEFQKGTNWADGPAFI 83 (495)
T ss_dssp CSEEEEEEEEEEECTTSCCEEEEEETTSSSCCEEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCBTT
T ss_pred CCeEEEEEEEEEEcCCCceEEEEEECCcccCCeEEEECCcEEEEEEEECCCCccCCCceEEEeCCcccCCCccccCCCcc
Confidence 3689999999999999999999999999999999999999999999999974 79999999999999999999999
Q ss_pred cCCCCCCCCceEEEEEeCCCCcceEEecChhhhh-ccceeeEEEcCCCCCC-CCCCCCCcceEEEEeeeeccCHHHHHHH
Q 008799 98 TQCPIQPGQSYVYNFTLTGQRGTLLWHAHISWLR-ATVHGAIVILPKRSVP-YPFPKADKEKIIVFGEWWKADVEAVINQ 175 (553)
Q Consensus 98 tq~~i~pG~~~~y~~~~~~~~Gt~wYH~H~~~~~-~Gl~G~liV~~~~~~~-~~~~~~~~e~~l~~~d~~~~~~~~~~~~ 175 (553)
|||+|+||++|+|+|++++++||||||||.+.|. +||+|+|||+++.+.. .+++..++|++|+++||+++.....
T Consensus 84 tq~pI~PG~sftY~f~~~~~~GT~wYHsH~~~q~~~GL~G~lIV~~~~~~~~~~~~~d~~e~~l~l~Dw~~~~~~~~--- 160 (495)
T 3t6v_A 84 TQCPIIVGNSFSYNFNVPGMAGTYWYHSHLTTQYCDGLRGPFVVYDPNDPDANLYDVDDDTTIITLADWYHVLAKEM--- 160 (495)
T ss_dssp TBCCBCTTCEEEEEEECTTCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSGGGEEEEEEECSSCGGGS---
T ss_pred ccCCCCCCCeEEEEEEeCCCCceeeeeccchhHHhcCceEEEEEcCccccccccCCCCCceeEEEEecccCCchhhh---
Confidence 9999999999999999977899999999999888 9999999999876421 1233335678999999999865431
Q ss_pred HHhCCCCCCCCceEEECCcCCCCCCCCC---CCeEEEEEcCCEEEEEEEecCCCceEEEEEcCceEEEEeeCCCcccceE
Q 008799 176 ATQMGVAPNVSDAHTINGHPGPVTNCTS---QGFTLHVESGKTYLLRIVNAAVNDELFFKIAGHNLTVVEVDSSYTKPFK 252 (553)
Q Consensus 176 ~~~~g~~~~~~~~~~iNG~~~~~~~~~~---~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~~p~~ 252 (553)
.+..+..+++++|||+.. +.|.. ..+.++|++|++|||||||+|+.+.+.|+|+||+|+|||+||.+++|+.
T Consensus 161 ---~~~~p~~~d~~liNG~g~--~~~~~~~~~~~~~~v~~G~~~RlRliN~~~~~~~~~~i~gh~~~via~DG~~~~P~~ 235 (495)
T 3t6v_A 161 ---GAGGAITADSTLIDGLGR--THVNVAAVPLSVITVEVGKRYRMRLVSISCDPNYDFSIDGHDMTIIETDGVDSQELT 235 (495)
T ss_dssp ---CSSSCCCCSEEEETTBCC--BSSSCCCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEEEEEEE
T ss_pred ---ccCCCCCCcEEEECCcCc--CCCCcccCCceEEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEEEEeCCcccCCEE
Confidence 223445779999999953 33433 2389999999999999999999999999999999999999999999999
Q ss_pred eeEEEeCCCccEEEEEEeCCCCCeeEEEEeeccccccccCCccEEEEEEEcCCCCCCCCccCCCCCCCCccccccccccc
Q 008799 253 TDTIFIGPGQTTNALLTADKKIGKYLITISPFMDTIVAVNNVTGIAFLRYKGTVAFSSTTLTNVPAINATEVTNTFSDNL 332 (553)
Q Consensus 253 ~d~~~l~pgeR~dv~v~~~~~~g~~~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l 332 (553)
++++.|+|||||||+|++++.+|+|+|++.+...+. .+.+....|+|+|.+.....+.. + .+..... ......|
T Consensus 236 ~~~l~i~pGqR~dvlv~~~~~~g~y~i~a~~~~~~~-~~~~~~~~ail~Y~~~~~~~p~~-~-~~~~~~~---~~~~~~L 309 (495)
T 3t6v_A 236 VDEIQIFAAQRYSFVLNANQPVGNYWIRANPNSGGE-GFDGGINSAILRYDGATTADPVT-V-ASTVHTK---CLIETDL 309 (495)
T ss_dssp ESBEEECTTCEEEEEEECCSCSSEEEEEEEESSSSC-SCGGGTTEEEEEETTSCSSCCCC-C-CCSSCSS---BCCGGGC
T ss_pred eeeEEEcCceEEEEEEECCCCCceEEEEEecccCcc-ccCCCceEEEEEECCCCCCCCCC-C-CCCCCcc---ccccccc
Confidence 999999999999999999987799999997643321 22333457999998764432211 0 0000000 0011234
Q ss_pred ccccCCCCCC-CCCCCcceEEEEEeeeeccCCccCCCCceeeEeeeceeeecCCchhhhhhhccccccccCCCCCCCCee
Q 008799 333 RSLNSKRYPA-KVPLTVDHSLLLTMAVAVNPCATCPNGTKVGAAMNNISFVMPTTALLQAHYYKISGVFTDDFPAKPPIA 411 (553)
Q Consensus 333 ~~l~~~~~p~-~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~ 411 (553)
+++.....|. ..+..+|+++.+.+.+.. ..|++||++|..|+.+++.+.. ++.+..
T Consensus 310 ~p~~~~~~p~~~~~~~~d~~~~l~~~~~~-----------~~w~iNg~s~~~~~~P~L~~~~---~g~~~~--------- 366 (495)
T 3t6v_A 310 HPLSRNGVPGNPHQGGADCNLNLSLGFAC-----------GNFVINGVSFTPPTVPVLLQIC---SGANTA--------- 366 (495)
T ss_dssp CBSSCCCCSSCSSTTCSSEEEECCEEEET-----------TEEEETTBCCCCCSSCHHHHHH---TTCCSS---------
T ss_pred cccccccCCCccCCCCCcEEEEEEEEecC-----------cEEEEcCEecCCCCCcchhhhh---cCCcCc---------
Confidence 4443222221 123456777766555421 1589999999988776554421 111110
Q ss_pred eccCCCCCCccccCCCeeEEEecCCCEEEEEEEcCCCCCCCCCCeeecCCceEEEeeCCCCCCCCCCCCCCCCCCCCcce
Q 008799 412 FNYTGNYTGTLQTTNGTRLYRLAYNSTVQLVLQGTTVIAPENHPTHLHGFNFFAVGKGSGNFDPNKDPQKFNLVDPVERN 491 (553)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~i~n~~~~~~~~HP~HlHG~~f~Vl~~g~g~~~~~~~~~~~~~~~p~~rD 491 (553)
........++.++.|++|||+|+|. ...+.||||||||+|+|++.+. ...+|+.+|.+||
T Consensus 367 ----------~~~~~~~~v~~~~~g~~V~ivl~~n--~~~~~HP~HLHGh~F~vl~~~g--------~~~~n~~~P~~rD 426 (495)
T 3t6v_A 367 ----------ADLLPSGSVISLPSNSTIEIALPAG--AAGGPHPFHLHGHDFAVSESAS--------NSTSNYDDPIWRD 426 (495)
T ss_dssp ----------TTSSSTTSEEEECTTCEEEEEEECC--SSSCCCEEEETTCCEEEEECTT--------CCCCCSSSCCEES
T ss_pred ----------ccccCCcceEEecCCCEEEEEEccC--CCCCCcceeecCCcEEEEecCC--------CCCcccCCCCCcc
Confidence 0001224578999999999999842 2467899999999999998742 2357889999999
Q ss_pred eeEecC-CcEEEEEEEecCceeeEEeecchhhHhccceEEEEEeC
Q 008799 492 TISVPT-AGWTAIRFRADNPGVWFLHCHLEVHTSWGLKMAFVVDN 535 (553)
Q Consensus 492 Tv~vp~-~g~~~irf~adnpG~w~~HCHil~H~d~GM~~~~~V~~ 535 (553)
||.|++ ++|++|||++||||.|+|||||++|++.||+++|.+.+
T Consensus 427 tv~v~~~g~~~~irf~adnPG~W~~HCHi~~H~~~Gm~~~~~e~~ 471 (495)
T 3t6v_A 427 VVSIGGVGDNVTIRFCTDNPGPWFLHCHIDWHLDAGFAIVFAEDI 471 (495)
T ss_dssp EEECCSTTCEEEEEEECCSCEEEEEEESCHHHHHTTCEEEEEETH
T ss_pred EEEcCCCCcEEEEEEEcCCCeeEEEEecchhHhhcCCeEEEEECh
Confidence 999997 89999999999999999999999999999999997554
No 6
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A*
Probab=100.00 E-value=3.1e-92 Score=750.44 Aligned_cols=456 Identities=30% Similarity=0.520 Sum_probs=356.6
Q ss_pred eEEEEEEEEEEEeecccceeeEEEECCCCCCCeEeecCCCEEEEEEEeCCCC-----CceeeeCCCcccCCCCCCCCCCc
Q 008799 23 VRHYNFTVVMTNMTKLCASKSIVTVNGKFPGPTLHAREDDNVIVRVTNHVKY-----NVTIHWHGVRQLRTGWYDGPAYI 97 (553)
Q Consensus 23 ~~~~~l~~~~~~~~~~g~~~~~~~~NG~~pGP~i~v~~Gd~v~v~l~N~l~~-----~~~iH~HG~~~~~~~~~DGv~~~ 97 (553)
...|+|+|++..+++||+.+.+|+|||++|||+||+++||+|+|+|+|.|++ +|+|||||+++..++|+||++++
T Consensus 3 ~~~~~l~v~~~~~~pdG~~~~~~~~NG~~PGP~I~~~~GD~v~V~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~v 82 (499)
T 3pxl_A 3 GPVADLTITDAAVSPDGFSRQAVVVNGVTPGPLVAGNIGDRFQLNVIDNLTNHTMLKSTSIHWHGFFQHGTNWADGPAFI 82 (499)
T ss_dssp CSEEEEEEEEEEECTTSCCEEEEEETTBSSCCCEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCBTT
T ss_pred cceEEEEEEEEEEcCCCcEEEEEEECCcccCCeEEEeCCCEEEEEEEECCCCccCCCceEEEeCCcccCCCccccCCCcc
Confidence 4689999999999999999999999999999999999999999999999974 79999999999999999999999
Q ss_pred cCCCCCCCCceEEEEEeCCCCcceEEecChhhhh-ccceeeEEEcCCCCCC-CCCCCCCcceEEEEeeeeccCHHHHHHH
Q 008799 98 TQCPIQPGQSYVYNFTLTGQRGTLLWHAHISWLR-ATVHGAIVILPKRSVP-YPFPKADKEKIIVFGEWWKADVEAVINQ 175 (553)
Q Consensus 98 tq~~i~pG~~~~y~~~~~~~~Gt~wYH~H~~~~~-~Gl~G~liV~~~~~~~-~~~~~~~~e~~l~~~d~~~~~~~~~~~~ 175 (553)
|||+|+||++|+|+|++++++||||||||.+.|. +||+|+|||+++.+.. .+++..++|++|+++||+++....
T Consensus 83 tq~pI~PG~s~tY~f~~~~~~GT~wYHsH~~~q~~~GL~G~lIV~~~~~~~~~~~~~d~~~~~l~l~Dw~~~~~~~---- 158 (499)
T 3pxl_A 83 NQCPISPGHSFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPFVVYDPNDPHASRYDVDNDDTVITLADWYHTAAKL---- 158 (499)
T ss_dssp TBCCBCTTCEEEEEEECSSCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSGGGEEEEEEECSSCTTT----
T ss_pred ccCCCCCCCeEEEEEEcCCCCceeeeeccchhHHhccceeEEEEcCCcccccccCCCCCceEEEEEEcccCCcccc----
Confidence 9999999999999999977899999999999888 9999999999876421 123333567899999999876432
Q ss_pred HHhCCCCCCCCceEEECCcCCCCCCCCC--CCeEEEEEcCCEEEEEEEecCCCceEEEEEcCceEEEEeeCCCcccceEe
Q 008799 176 ATQMGVAPNVSDAHTINGHPGPVTNCTS--QGFTLHVESGKTYLLRIVNAAVNDELFFKIAGHNLTVVEVDSSYTKPFKT 253 (553)
Q Consensus 176 ~~~~g~~~~~~~~~~iNG~~~~~~~~~~--~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~~p~~~ 253 (553)
.+..+..+++++|||+.. +.|.. ..+.++|++|++|||||||+|..+.+.|+|+||+|+|||+||.+++|+.+
T Consensus 159 ---~~~~p~~~d~~liNG~~~--~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~via~DG~~~~P~~~ 233 (499)
T 3pxl_A 159 ---GPRFPGGADATLINGKGR--APSDSVAELSVIKVTKGKRYRFRLVSLSCNPNHTFSIDGHNLTIIEVDSVNSQPLEV 233 (499)
T ss_dssp ---SCSSCSSCSEEEETTBCC--CTTCTTCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEEEEETTEEEEEEEE
T ss_pred ---ccCCCCCCcEEEECCCCc--CCCCCCCCcceEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEEEEECCcccCceEe
Confidence 233445679999999953 33432 23899999999999999999999999999999999999999999999999
Q ss_pred eEEEeCCCccEEEEEEeCCCCCeeEEEEeeccccccccCCccEEEEEEEcCCCCCCCCccCCCCCCCCcccccccccccc
Q 008799 254 DTIFIGPGQTTNALLTADKKIGKYLITISPFMDTIVAVNNVTGIAFLRYKGTVAFSSTTLTNVPAINATEVTNTFSDNLR 333 (553)
Q Consensus 254 d~~~l~pgeR~dv~v~~~~~~g~~~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~ 333 (553)
++|.|+|||||||+|++++.+|+|+|++.+...+. .+.+....|+|+|.+.....+.. +..+.... .....|+
T Consensus 234 ~~l~i~pGqR~dvlv~~~~~~g~y~i~a~~~~~~~-~~~~~~~~ail~Y~~~~~~~p~~-~~~~~~~~-----~~~~~L~ 306 (499)
T 3pxl_A 234 DSIQIFAAQRYSFVLDANQAVDNYWIRANPNFGNV-GFDGGINSAILRYDGAPAVEPTT-NQTTSVKP-----LNEVDLH 306 (499)
T ss_dssp SBEEECTTCEEEEEEECCSCSSEEEEEEEESSSSC-SCGGGTTEEEEEETTSCSSCCCC-CCCCCSSB-----CCGGGCC
T ss_pred eeEEECCCcEEEEEEECCCCCceEEEEEecccCcc-ccCCCceEEEEEeCCCCCCCCCC-CCCCCCcc-----ccccccc
Confidence 99999999999999999987799999997643221 22333457999998765322111 11011010 0112344
Q ss_pred cccCCCCCC-CCCCCcceEEEEEeeeeccCCccCCCCceeeEeeeceeeecCCchhhhhhhccccccccCCCCCCCCeee
Q 008799 334 SLNSKRYPA-KVPLTVDHSLLLTMAVAVNPCATCPNGTKVGAAMNNISFVMPTTALLQAHYYKISGVFTDDFPAKPPIAF 412 (553)
Q Consensus 334 ~l~~~~~p~-~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 412 (553)
++.....|. ..+..+|+++.+.+.+. + ..|++||++|..|+.+++.+.. ++.+..
T Consensus 307 p~~~~~~p~~~~~~~~d~~~~l~~~~~---------~--~~w~iNg~s~~~~~~P~L~~~~---~g~~~~---------- 362 (499)
T 3pxl_A 307 PLVSTPVPGAPSSGGVDKAINMAFNFN---------G--SNFFINGASFVPPTVPVLLQIL---SGAQTA---------- 362 (499)
T ss_dssp BSSCCCCSSCSSTTCSSEEEECCEEEC---------S--SCEEETTBCCCCCSSCHHHHHH---TTCCST----------
T ss_pred ccccccCCCcccCCCCcEEEEEEEEec---------C--cEEEEcCEecCCCCCchhhhhh---cCCccc----------
Confidence 443322222 13345677776665542 1 1589999999988776654422 111100
Q ss_pred ccCCCCCCccccCCCeeEEEecCCCEEEEEEEcCCCCCCCCCCeeecCCceEEEeeCCCCCCCCCCCCCCCCCCCCccee
Q 008799 413 NYTGNYTGTLQTTNGTRLYRLAYNSTVQLVLQGTTVIAPENHPTHLHGFNFFAVGKGSGNFDPNKDPQKFNLVDPVERNT 492 (553)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~i~n~~~~~~~~HP~HlHG~~f~Vl~~g~g~~~~~~~~~~~~~~~p~~rDT 492 (553)
........++.++.|++|||+|+|.+....+.||||||||+|+|++.+. ...+|+.+|.+|||
T Consensus 363 ---------~~~~~~~~v~~~~~g~~V~ivl~~~~n~~~~~HP~HLHGh~F~Vl~~~g--------~~~~n~~~P~~rDt 425 (499)
T 3pxl_A 363 ---------QDLLPSGSVYVLPSNASIEISFPATAAAPGAPHPFHLHGHTFAVVRSAG--------STVYNYDNPIFRDV 425 (499)
T ss_dssp ---------TTSSSTTSEEEECTTCEEEEEEECCTTSCSCSCEEEETTCCEEEEECTT--------CCCCCSSSCCEESE
T ss_pred ---------cccCCCceeEEecCCCEEEEEEecCcccCCCCccceecCCcEEEEeccC--------CcccccCCCCccce
Confidence 0001224578999999999999953323467899999999999998642 23578899999999
Q ss_pred eEecC---CcEEEEEEEecCceeeEEeecchhhHhccceEEEEEeC
Q 008799 493 ISVPT---AGWTAIRFRADNPGVWFLHCHLEVHTSWGLKMAFVVDN 535 (553)
Q Consensus 493 v~vp~---~g~~~irf~adnpG~w~~HCHil~H~d~GM~~~~~V~~ 535 (553)
|.||+ ++|++|||++||||.|+|||||+||++.||+++|.+.+
T Consensus 426 v~v~~~~pg~~~~irf~adnPG~W~~HCHi~~H~~~Gm~~~~~e~~ 471 (499)
T 3pxl_A 426 VSTGTPAAGDNVTIRFDTNNPGPWFLHCHIDFHLEGGFAVVMAEDT 471 (499)
T ss_dssp EECCCGGGTCEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEESG
T ss_pred EEcCCcCCCcEEEEEEEcCCCceEEEEeCChhHhhCCCcEEEEECh
Confidence 99997 99999999999999999999999999999999996554
No 7
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A*
Probab=100.00 E-value=8.3e-91 Score=753.08 Aligned_cols=471 Identities=24% Similarity=0.402 Sum_probs=357.9
Q ss_pred cccceEEEEEEEEEEE--eecccce-eeEEEECCCCCCCeEeecCCCEEEEEEEeCC-CCCceeeeCCCcccCCCCCCCC
Q 008799 19 VESAVRHYNFTVVMTN--MTKLCAS-KSIVTVNGKFPGPTLHAREDDNVIVRVTNHV-KYNVTIHWHGVRQLRTGWYDGP 94 (553)
Q Consensus 19 ~~~~~~~~~l~~~~~~--~~~~g~~-~~~~~~NG~~pGP~i~v~~Gd~v~v~l~N~l-~~~~~iH~HG~~~~~~~~~DGv 94 (553)
..+++++|+|++++.. ++++|.. +.+|+|||++|||+||+++||+|+|+|+|.| +++|+|||||+++.+++|+||+
T Consensus 29 ~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~Ng~~PGP~i~~~~GD~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG~ 108 (559)
T 2q9o_A 29 DTGVTQSYVFNLTEVDNWMGPDGVVKEKVMLINGNIMGPNIVANWGDTVEVTVINNLVTNGTSIHWHGIXQKDTNLHDGA 108 (559)
T ss_dssp CCCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTBSSCCCEEEETTCEEEEEEEEECSSCCBCEEEETCCCTTCGGGSCC
T ss_pred CCCeEEEEEEEEEEeEeeECCCCccceEEEEECCcccCCcEEEeCCCEEEEEEEeCCCCCCceEEcCCCccCCCCCcCCC
Confidence 3567899999999999 8889999 9999999999999999999999999999999 6899999999999988899999
Q ss_pred CCccCCCCCC-CCceEEEEEeCCCCcceEEecChhhhh-ccceeeEEEcCCCCCCCCCCCCCcce-EEEEeeeeccCHHH
Q 008799 95 AYITQCPIQP-GQSYVYNFTLTGQRGTLLWHAHISWLR-ATVHGAIVILPKRSVPYPFPKADKEK-IIVFGEWWKADVEA 171 (553)
Q Consensus 95 ~~~tq~~i~p-G~~~~y~~~~~~~~Gt~wYH~H~~~~~-~Gl~G~liV~~~~~~~~~~~~~~~e~-~l~~~d~~~~~~~~ 171 (553)
|++|||+|.| |++|+|+|++ .++||||||||...|. +||+|+|||+++... .+|+|. +|+++||++++..+
T Consensus 109 ~~~tq~~I~P~G~~~~Y~f~~-~q~GT~wYH~H~~~q~~~Gl~G~liV~~~~~~-----~~d~d~~~l~l~Dw~~~~~~~ 182 (559)
T 2q9o_A 109 NGVTECPIPPKGGQRTYRWRA-RQYGTSWYHSHFSAQYGNGVVGTIQINGPASL-----PYDIDLGVFPITDYYYRAADD 182 (559)
T ss_dssp BTTTBCCBCTTTEEEEEEEEC-CSCEEEEEEECSTTGGGGTCEEEEEEECCCSS-----CCSEEEEEEEEEEECSSCHHH
T ss_pred CccccCccCCCCCeEEEEEEC-CCCEEEEEEEcccchhcCCceEEEEecCCCcC-----CCcccceEEEEeccccCCHHH
Confidence 9999999999 9999999998 7899999999999888 899999999987643 357777 99999999998877
Q ss_pred HHHHHHhCCCCCCCCceEEECCcCCCCCCCCC--CCeEEEEEcCCEEEEEEEecCCCceEEEEEcCceEEEEeeCCCccc
Q 008799 172 VINQATQMGVAPNVSDAHTINGHPGPVTNCTS--QGFTLHVESGKTYLLRIVNAAVNDELFFKIAGHNLTVVEVDSSYTK 249 (553)
Q Consensus 172 ~~~~~~~~g~~~~~~~~~~iNG~~~~~~~~~~--~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~~ 249 (553)
+..... ...+..++.++|||+... .|.. ..+.++|++|++|||||||+|+.+.+.|+|+||+|+|||+||.+++
T Consensus 183 ~~~~~~--~~~~~~~d~~liNG~~~~--~~~~~g~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~vi~~DG~~~~ 258 (559)
T 2q9o_A 183 LVHFTQ--NNAPPFSDNVLINGTAVN--PNTGEGQYANVTLTPGKRHRLRILNTSTENHFQVSLVNHTMTVIAADMVPVN 258 (559)
T ss_dssp HHHHHT--TSCCCCBSEEEETTBCBC--TTTCCBCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEEEEETTEEEE
T ss_pred Hhhhhh--cCCCCccceeEECCcccc--CcCCCCCceEEEEcCCCEEEEEEEecCCCceEEEEECCCceEEEecCCcccC
Confidence 654322 223456789999999753 3432 2378999999999999999999999999999999999999999999
Q ss_pred ceEeeEEEeCCCccEEEEEEeCCCCCeeEEEEeec--cccccccCCccEEEEEEEcCCCCCCCCccCCCCCCCCcccccc
Q 008799 250 PFKTDTIFIGPGQTTNALLTADKKIGKYLITISPF--MDTIVAVNNVTGIAFLRYKGTVAFSSTTLTNVPAINATEVTNT 327 (553)
Q Consensus 250 p~~~d~~~l~pgeR~dv~v~~~~~~g~~~i~~~~~--~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~p~~~~~~~~~~ 327 (553)
|+.++++.|+|||||||+|++++.+|.|+|++..+ ..+ ....+....++|+|.+.....+.. ...+. .+. .+..
T Consensus 259 p~~~~~l~l~pgeR~dvlv~~~~~~g~y~i~a~~~~~~~~-~~~~~~~~~ail~y~~~~~~~P~~-~~~~~-~~~-~~~~ 334 (559)
T 2q9o_A 259 AMTVDSLFLAVGQRYDVVIDASRAPDNYWFNVTFGGQAAC-GGSLNPHPAAIFHYAGAPGGLPTD-EGTPP-VDH-QCLD 334 (559)
T ss_dssp EEEESCEEECTTCEEEEEEECCSCSSEEEEEEECCGGGTT-CCBSSSCCEEEEEETTSCCSCCCC-CCCCC-CCC-TTCC
T ss_pred ceEeCeEEEccEEEEEEEEECCCCCCcEEEEEEecccccc-CCCCCCceeEEEEECCCCCCCCCC-CCCcC-CCc-cccc
Confidence 99999999999999999999998779999999862 221 112334568999998764321111 11110 000 0000
Q ss_pred cccccccccCCCCCCC-CCCCcceEEEEEeeeeccCCccCCCCceeeEeeeceeeecC-CchhhhhhhccccccccCCCC
Q 008799 328 FSDNLRSLNSKRYPAK-VPLTVDHSLLLTMAVAVNPCATCPNGTKVGAAMNNISFVMP-TTALLQAHYYKISGVFTDDFP 405 (553)
Q Consensus 328 ~~~~l~~l~~~~~p~~-~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~p-~~~~~~~~~~~~~~~~~~~~~ 405 (553)
. ..+.++.....|.. .....+.++.+..... .+..+.|++||++|..+ ..+++...+.+. .+|+
T Consensus 335 ~-~~l~p~~~~~~p~~~~~~~~~~~~~~~~~~~--------~~~~~~~~iNg~s~~~~~~~P~L~~~~~g~-----~~~~ 400 (559)
T 2q9o_A 335 T-LDVRPVVPRSVPVNSFVKRPDNTLPVALDLT--------GTPLFVWKVNGSDINVDWGKPIIDYILTGN-----TSYP 400 (559)
T ss_dssp C-SCCCBSSCCBCCCTTCCCCGGGEEEEEEECS--------SSSSCEEEETTBCCCCCTTSCHHHHHHHTC-----CCCC
T ss_pred c-cccccCCCCCCCCcccccceeEEEEEEeecC--------CCceEEEEECCEecccCCCCCcHhHhhcCC-----ccCC
Confidence 0 11222111111110 1111223343332210 12356799999999754 445544322111 1111
Q ss_pred CCCCeeeccCCCCCCccccCCCeeEEEecC-CCEEEEEEEcCCC-CCCCCCCeeecCCceEEEeeCC---------CCCC
Q 008799 406 AKPPIAFNYTGNYTGTLQTTNGTRLYRLAY-NSTVQLVLQGTTV-IAPENHPTHLHGFNFFAVGKGS---------GNFD 474 (553)
Q Consensus 406 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~v~~~i~n~~~-~~~~~HP~HlHG~~f~Vl~~g~---------g~~~ 474 (553)
.+..++.++. +++++|+++|... ...+.||||||||+||||+++. |.|+
T Consensus 401 --------------------~~~~~~~~~~~~~v~~~vi~n~~~~~~~~~HP~HLHGh~F~Vl~~g~~~~~~~~~~g~~~ 460 (559)
T 2q9o_A 401 --------------------VSDNIVQVDAVDQWTYWLIENDPEGPFSLPHPMHLHGHDFLVLGRSPDVPAASQQRFVFD 460 (559)
T ss_dssp --------------------GGGCEEEECCSSCEEEEEEEECTTSSCCCCEEEEESSSCEEEEEESCCCCTTSCCCCCCC
T ss_pred --------------------CCceEEEcCCCCEEEEEEEeCCCccccCCCCcEEECCCceEEEecccccccccccccccC
Confidence 1234556654 5788888888431 0157899999999999999987 6666
Q ss_pred CCCCCCCCCCCCCCcceeeEecCCcEEEEEEEecCceeeEEeecchhhHhccceEEEEEeCCC
Q 008799 475 PNKDPQKFNLVDPVERNTISVPTAGWTAIRFRADNPGVWFLHCHLEVHTSWGLKMAFVVDNGK 537 (553)
Q Consensus 475 ~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~adnpG~w~~HCHil~H~d~GM~~~~~V~~~~ 537 (553)
+..+...+++.+|.|||||.||+++|++|||++||||.|||||||++|++.|||++|.|.+++
T Consensus 461 ~~~~~~~~n~~~p~~RDTV~Vp~~g~v~IrF~adNPG~W~~HCHil~H~~~GM~~~~~v~~~~ 523 (559)
T 2q9o_A 461 PAVDLARLNGDNPPRRDTTMLPAGGWLLLAFRTDNPGAWLFHCHIAWHVSGGLSVDFLERPAD 523 (559)
T ss_dssp HHHHGGGCCCBSCCEESEEEECTTSEEEEEEECCSCEEEEEEECCHHHHHTTCEEEEEECHHH
T ss_pred ccccccccccCCCCccceEEccCCccEEEEEEcCCCeeEEEEecchhHhhcCCeEEEEECcch
Confidence 433335678899999999999999999999999999999999999999999999999887543
No 8
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A*
Probab=100.00 E-value=1.5e-90 Score=743.27 Aligned_cols=468 Identities=29% Similarity=0.507 Sum_probs=358.2
Q ss_pred EEEEEEEEEEEeecccceeeEEEECCCCCCCeEeecCCCEEEEEEEeCCC-----CCceeeeCCCcccCCCCCCCCCCcc
Q 008799 24 RHYNFTVVMTNMTKLCASKSIVTVNGKFPGPTLHAREDDNVIVRVTNHVK-----YNVTIHWHGVRQLRTGWYDGPAYIT 98 (553)
Q Consensus 24 ~~~~l~~~~~~~~~~g~~~~~~~~NG~~pGP~i~v~~Gd~v~v~l~N~l~-----~~~~iH~HG~~~~~~~~~DGv~~~t 98 (553)
.+|+|++++..++++|..+++|+|||++ ||+||+++||+|+|+|+|.|+ ++|+|||||+++.+++|+||+|++|
T Consensus 5 ~~~~l~i~~~~~~~~g~~~~~~~~NG~~-GP~i~~~~Gd~v~v~v~N~l~~~~~~~~tsiHwHG~~~~~~~~~DGv~~vt 83 (503)
T 1hfu_A 5 SVDTMTLTNANVSPDGFTRAGILVNGVH-GPLIRGGKNDNFELNVVNDLDNPTMLRPTSIHWHGLFQRGTNWADGADGVN 83 (503)
T ss_dssp SEEEEEEEEEEECTTSCCEEEEEETTBS-SCEEEEETTCCEEEEEEECCCCTTSCCSBCEEEETCCCTTCGGGSCCBTTT
T ss_pred CeEEEEEEEEEECCCCeEEEEEEECCcc-CCcEEEeCCCEEEEEEEeCCCCccCCCcccEeccceeccCCCccCCCcccc
Confidence 4799999999999999999999999999 999999999999999999998 9999999999998888999999999
Q ss_pred CCCCCCCCceEEEEEeCCCCcceEEecChhhhh-ccceeeEEEcCCCCC-CCCCCCCCcceEEEEeeeeccCHHHHHHHH
Q 008799 99 QCPIQPGQSYVYNFTLTGQRGTLLWHAHISWLR-ATVHGAIVILPKRSV-PYPFPKADKEKIIVFGEWWKADVEAVINQA 176 (553)
Q Consensus 99 q~~i~pG~~~~y~~~~~~~~Gt~wYH~H~~~~~-~Gl~G~liV~~~~~~-~~~~~~~~~e~~l~~~d~~~~~~~~~~~~~ 176 (553)
||+|.||++|+|+|++.+++||||||||.+.|. +||+|+|||+++.+. ..+++..++|++|+++||+++...++.
T Consensus 84 q~~I~PG~~~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~d~~e~~l~l~Dw~~~~~~~~~--- 160 (503)
T 1hfu_A 84 QCPISPGHAFLYKFTPAGHAGTFWYHSHFGTQYCDGLRGPMVIYDDNDPHAALYDEDDENTIITLADWYHIPAPSIQ--- 160 (503)
T ss_dssp BCCBCTTCEEEEEECCTTCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSTTSEEEEEEECSSCGGGCC---
T ss_pred cCCcCCCCeEEEEEEeCCCCccEEEEecchhhhhCcceeeEEEcCCCCCcccCCCCCCceEEEEEcccccCChHHhc---
Confidence 999999999999999768999999999999988 899999999987632 122333346999999999998765421
Q ss_pred HhCCCCCCCCceEEECCcCCCCCCCCCCC--eEEEEEcCCEEEEEEEecCCCceEEEEEcCceEEEEeeCCCcccceEee
Q 008799 177 TQMGVAPNVSDAHTINGHPGPVTNCTSQG--FTLHVESGKTYLLRIVNAAVNDELFFKIAGHNLTVVEVDSSYTKPFKTD 254 (553)
Q Consensus 177 ~~~g~~~~~~~~~~iNG~~~~~~~~~~~~--~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~~p~~~d 254 (553)
+ ...++.++|||+.. +.|.... +.++|++|++|||||||+|+.+.+.|+|+||+|+|||+||.+++|+.++
T Consensus 161 ---~--~~~~d~~liNG~~~--~~~~~~~~~~~~~v~~g~~~RlRliN~~~~~~~~~~i~gh~~~vi~~DG~~~~p~~~~ 233 (503)
T 1hfu_A 161 ---G--AAQPDATLINGKGR--YVGGPAAELSIVNVEQGKKYRMRLISLSCDPNWQFSIDGHELTIIEVDGELTEPHTVD 233 (503)
T ss_dssp --------CCSEEEETTBCC--BTTCCCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEEEEEEEES
T ss_pred ---C--CCCCCEEEECcccc--cCCCCCCcceEEEEcCCCEEEEEEEecCCcccEEEEEcCceEEEEeccCccccccccC
Confidence 1 13468999999974 5665432 8999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCCccEEEEEEeCCCCCeeEEEEeecccccc---ccCCccEEEEEEEcCCCCCCCCccCCCCCCCCcccccccccc
Q 008799 255 TIFIGPGQTTNALLTADKKIGKYLITISPFMDTIV---AVNNVTGIAFLRYKGTVAFSSTTLTNVPAINATEVTNTFSDN 331 (553)
Q Consensus 255 ~~~l~pgeR~dv~v~~~~~~g~~~i~~~~~~~~~~---~~~~~~~~ail~y~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 331 (553)
++.|+|||||||+|++++.+|+|+|++........ .+......++|+|.+.....+. .+..|...... ...
T Consensus 234 ~l~l~pgeR~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~p~-~~~~~~~~~l~-----~~~ 307 (503)
T 1hfu_A 234 RLQIFTGQRYSFVLDANQPVDNYWIRAQPNKGRNGLAGTFANGVNSAILRYAGAANADPT-TSANPNPAQLN-----EAD 307 (503)
T ss_dssp BEEECTTCEEEEEEECCSCSSEEEEEEEESSCGGGGGGCCGGGTTEEEEEETTSCSSCCC-CCCCSSCCBCC-----GGG
T ss_pred eEEEcccceEEEEEEcCCCccceeeeeccccCCcccccccCCCceEEEEEECCCCCCCCC-CCCCCccCCCc-----ccc
Confidence 99999999999999999877999999986532211 1222234699999976542211 11111111100 012
Q ss_pred cccccCCCCCC-CCCCCcceEEEEEeeeeccCCccCCCCceeeEeeeceeeecCCchhhhhhhccccccccCCCCCCCCe
Q 008799 332 LRSLNSKRYPA-KVPLTVDHSLLLTMAVAVNPCATCPNGTKVGAAMNNISFVMPTTALLQAHYYKISGVFTDDFPAKPPI 410 (553)
Q Consensus 332 l~~l~~~~~p~-~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~p~ 410 (553)
|+++.....|. ..+...+.++.+++.. ++. .|++||++|..+..+++.+... +.+..
T Consensus 308 l~p~~~~~~p~~~~~~~~~~~~~l~~~~---------~~~--~~~iNg~~~~~~~~P~l~~~~~---g~~~~-------- 365 (503)
T 1hfu_A 308 LHALIDPAAPGIPTPGAADVNLRFQLGF---------SGG--RFTINGTAYESPSVPTLLQIMS---GAQSA-------- 365 (503)
T ss_dssp CBBSSSCSCSSCSSTTCSSEEEECCEEE---------ETT--EEEETTBCCCCCSSCHHHHHHT---TCCSG--------
T ss_pred ccccCccCCCCcccCCcceEEEEEEeec---------cCc--eEEECCCccCCCCCcchhhhhc---CCccc--------
Confidence 33332222221 1122344444333222 112 5999999998887665544221 11100
Q ss_pred eeccCCCCCCccccCCCeeEEEecCCCEEEEEEEcCCCCCCCCCCeeecCCceEEEeeCCCCCCCCCCCCCCCCCCCCcc
Q 008799 411 AFNYTGNYTGTLQTTNGTRLYRLAYNSTVQLVLQGTTVIAPENHPTHLHGFNFFAVGKGSGNFDPNKDPQKFNLVDPVER 490 (553)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~i~n~~~~~~~~HP~HlHG~~f~Vl~~g~g~~~~~~~~~~~~~~~p~~r 490 (553)
.....+..++.++.|++||++++|.. ..+.||||||||+|||++++.+. .+++.+|.||
T Consensus 366 -----------~~~~~~~~~~~v~~g~~vei~l~~n~--~~~~HP~HLHGh~F~Vl~~~~~~--------~~n~~~p~~r 424 (503)
T 1hfu_A 366 -----------NDLLPAGSVYELPRNQVVELVVPAGV--LGGPHPFHLHGHAFSVVRSAGSS--------TYNFVNPVKR 424 (503)
T ss_dssp -----------GGSSSTTSEEEECSSCEEEEEEECCS--TTCCCEEEETTCCEEEEECTTCC--------CCCCSSBCEE
T ss_pred -----------ccCCCCceEEEccCCCEEEEEEECCC--CCCCCCEEEecceEEEEecCCCC--------ccccCCCCee
Confidence 00123456789999999999999532 36789999999999999997542 3577899999
Q ss_pred eeeEe-cCCcEEEEEEEecCceeeEEeecchhhHhccceEEEEEeCCCCCCCCCCCCC-CCCCCC
Q 008799 491 NTISV-PTAGWTAIRFRADNPGVWFLHCHLEVHTSWGLKMAFVVDNGKGPNESLIPPP-SDLPTC 553 (553)
Q Consensus 491 DTv~v-p~~g~~~irf~adnpG~w~~HCHil~H~d~GM~~~~~V~~~~~~~~~~~~~p-~~~~~c 553 (553)
|||.| |+++|++|||++||||.|+|||||++|++.|||++|.|.+.+.. ++..+| .+.+.|
T Consensus 425 DTV~V~ppg~~v~irf~adnPG~W~~HCHil~H~~~GM~~~~~v~~~~~~--~~~~~p~~~~~~C 487 (503)
T 1hfu_A 425 DVVSLGVTGDEVTIRFVTDNPGPWFFHCHIEFHLMNGLAIVFAEDMANTV--DANNPPVEWAQLC 487 (503)
T ss_dssp SEEECCSTTCEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEECHHHHH--HHCCCCHHHHHHH
T ss_pred eeEEecCCCceEEEEEEcCCCeeeeEecCchhHhhCCCeEEEEECchhhh--hccCCChHHhhhc
Confidence 99999 99999999999999999999999999999999999998654331 223334 445665
No 9
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A
Probab=100.00 E-value=1.4e-83 Score=679.02 Aligned_cols=402 Identities=21% Similarity=0.340 Sum_probs=319.7
Q ss_pred ccceEEEEEEEEEEEeecccceeeEEEECCCCCCCeEeecCCCEEEEEEEeCCCCCceeeeCCCcccCCCCCCCCCCccC
Q 008799 20 ESAVRHYNFTVVMTNMTKLCASKSIVTVNGKFPGPTLHAREDDNVIVRVTNHVKYNVTIHWHGVRQLRTGWYDGPAYITQ 99 (553)
Q Consensus 20 ~~~~~~~~l~~~~~~~~~~g~~~~~~~~NG~~pGP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq 99 (553)
.+..++|+|++++..++++|.++++|+|||++|||+||+++||+|+|+|+|.|+++|+|||||+++.+ ++||++
T Consensus 13 ~~~~~~~~l~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~--~~DG~~---- 86 (439)
T 2xu9_A 13 QGGLLSLKLSATPTPLAIAGQRATLLTYGGSFPGPTLRVRPRDTVRLTLENRLPEPTNLHWHGLPISP--KVDDPF---- 86 (439)
T ss_dssp BTTEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEECTTCEEEEEEEECSSSCBCCEEETCCCCT--TTSCTT----
T ss_pred CCCeEEEEEEEEEEEEEcCCceEEEEEECCcccCCEEEEeCCCEEEEEEEECCCCCcceEeCCCCCCc--cccCCc----
Confidence 45678999999999999999999999999999999999999999999999999999999999999875 699986
Q ss_pred CCCCCCCceEEEEEeC-CCCcceEEecChhh----hh-ccceeeEEEcCCCCCCCCCCCCCcceEEEEeeeeccCHHH--
Q 008799 100 CPIQPGQSYVYNFTLT-GQRGTLLWHAHISW----LR-ATVHGAIVILPKRSVPYPFPKADKEKIIVFGEWWKADVEA-- 171 (553)
Q Consensus 100 ~~i~pG~~~~y~~~~~-~~~Gt~wYH~H~~~----~~-~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~-- 171 (553)
+.|.||++|+|+|+++ +++||||||||.++ |. +||+|+|||+++.+.. +....++|++|+++||+++....
T Consensus 87 ~~I~PG~~~~Y~f~~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~-~~~~~~~e~~l~l~D~~~~~~~~~~ 165 (439)
T 2xu9_A 87 LEIPPGESWTYEFTVPKELAGTFWYHPHLHGRVAPQLFAGLLGALVVESSLDAI-PELREAEEHLLVLKDLALQGGRPAP 165 (439)
T ss_dssp CCBCTTCEEEEEEECCSSCCEEEEEECCCTTSHHHHHHTTCCEEEEECCGGGGS-HHHHTSEEEEEEEEEECEETTEECC
T ss_pred ccCCCCCeEEEEEecCCCCCcceEeccCCCCchHHHHHhhCeEEEEEcCccccC-ccCCCCCcEEEEEEeeeeCCCCcCC
Confidence 4699999999999983 48999999999864 44 8999999999876421 11135789999999999875310
Q ss_pred --HHHHHHhCCCCCCCCceEEECCcCCCCCCCCCCCeEEEEEcCCEEEEEEEecCCCceEEEEEcCceEEEEeeCCCcc-
Q 008799 172 --VINQATQMGVAPNVSDAHTINGHPGPVTNCTSQGFTLHVESGKTYLLRIVNAAVNDELFFKIAGHNLTVVEVDSSYT- 248 (553)
Q Consensus 172 --~~~~~~~~g~~~~~~~~~~iNG~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~- 248 (553)
.... ..| ..++.++|||+.. |.++|++| +|||||||+|+.+.+.|+|+||+|+||++||.++
T Consensus 166 ~~~~~~--~~g---~~~~~~~iNG~~~---------p~l~v~~g-~~RlRliN~~~~~~~~~~i~gh~~~vi~~DG~~~~ 230 (439)
T 2xu9_A 166 HTPMDW--MNG---KEGDLVLVNGALR---------PTLVAQKA-TLRLRLLNASNARYYRLALQDHPLYLIAADGGFLE 230 (439)
T ss_dssp CCHHHH--HHC---CCCSEEEETTEES---------CEEECSSS-EEEEEEEECCSSCCEEEEETTBCEEEEEETTEEEE
T ss_pred CCcccc--ccC---CCCCEEEECCccC---------CcEEecCC-eEEEEEEecCCCceEEEEECCceEEEEecCCCCCC
Confidence 0011 112 2458999999987 88999999 9999999999999999999999999999999997
Q ss_pred cceEeeEEEeCCCccEEEEEEeCCCCCeeEEEEeeccccccc--------------cCCccEEEEEEEcCCCCCCCCccC
Q 008799 249 KPFKTDTIFIGPGQTTNALLTADKKIGKYLITISPFMDTIVA--------------VNNVTGIAFLRYKGTVAFSSTTLT 314 (553)
Q Consensus 249 ~p~~~d~~~l~pgeR~dv~v~~~~~~g~~~i~~~~~~~~~~~--------------~~~~~~~ail~y~~~~~~~~~~~~ 314 (553)
+|+.++++.|+|||||||+|++++ +|+|++++..+..+... .......++++|.+.....
T Consensus 231 ~p~~~~~l~l~pgeR~dv~v~~~~-~G~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~----- 304 (439)
T 2xu9_A 231 EPLEVSELLLAPGERAEVLVRLRK-EGRFLLQALPYDRGAMGMMDMGGMAHAMPQGPSRPETLLYLIAPKNPKPL----- 304 (439)
T ss_dssp EEEEESCEEECTTCEEEEEEECCS-SEEEEEEEECCCCCCEEEECSSSCCEEEECCSCCCEEEEEEEECSSCCCC-----
T ss_pred CceEeceEEECCceeEEEEEEcCC-CceEEEEecccccCCccccccccccccccCCCCCcceeEEEEecCCCccc-----
Confidence 899999999999999999999998 79999999765332110 0123467888887653211
Q ss_pred CCCCCCCcccccccccccccccCCCCCCCCCCCcceEEEEEeeeeccCCccCCCCceeeEeeeceeeecCCchhhhhhhc
Q 008799 315 NVPAINATEVTNTFSDNLRSLNSKRYPAKVPLTVDHSLLLTMAVAVNPCATCPNGTKVGAAMNNISFVMPTTALLQAHYY 394 (553)
Q Consensus 315 ~~p~~~~~~~~~~~~~~l~~l~~~~~p~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~p~~~~~~~~~~ 394 (553)
.+|. .. ..+.++ ..+ ..++++.+.+... + ..|++|+++|..+.
T Consensus 305 ~~p~--~l-------~~~~~l-------~~~-~~~r~~~l~~~~~---------g--~~~~iNg~~~~~~~--------- 347 (439)
T 2xu9_A 305 PLPK--AL-------SPFPTL-------PAP-VVTRRLVLTEDMM---------A--ARFFINGQVFDHRR--------- 347 (439)
T ss_dssp CCCS--CC-------CCCCCC-------CCC-SEEEEEEEEEEGG---------G--TEEEETTBCCCTTC---------
T ss_pred cCcc--cC-------CCcccC-------CCC-CcceEEEEEeecc---------C--ceEeECCEECCCCC---------
Confidence 0111 00 001111 111 1235555544330 1 24889998774221
Q ss_pred cccccccCCCCCCCCeeeccCCCCCCccccCCCeeEEEecCCCEEEEEEEcCCCCCCCCCCeeecCCceEEEeeCCCCCC
Q 008799 395 KISGVFTDDFPAKPPIAFNYTGNYTGTLQTTNGTRLYRLAYNSTVQLVLQGTTVIAPENHPTHLHGFNFFAVGKGSGNFD 474 (553)
Q Consensus 395 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~i~n~~~~~~~~HP~HlHG~~f~Vl~~g~g~~~ 474 (553)
..+.++.|++|+|+|+|.+ .+.||||||||+|||++++.+.
T Consensus 348 ----------------------------------~~~~~~~g~~~~~~~~N~~---~~~HP~HLHG~~F~Vl~~~g~~-- 388 (439)
T 2xu9_A 348 ----------------------------------VDLKGQAQTVEVWEVENQG---DMDHPFHLHVHPFQVLSVGGRP-- 388 (439)
T ss_dssp ----------------------------------CCEEECTTCEEEEEEEECS---SSCEEEEESSCCBEEEEETTEE--
T ss_pred ----------------------------------CceecCCCCEEEEEEEcCC---CCCCCceeCCCcEEEEeeCCCC--
Confidence 1146789999999999964 6789999999999999997443
Q ss_pred CCCCCCCCCCCCCCcceeeEecCCcEEEEEEEecCceeeEEeecchhhHhccceEEEEEe
Q 008799 475 PNKDPQKFNLVDPVERNTISVPTAGWTAIRFRADNPGVWFLHCHLEVHTSWGLKMAFVVD 534 (553)
Q Consensus 475 ~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~adnpG~w~~HCHil~H~d~GM~~~~~V~ 534 (553)
+.+|.|||||.|++++|++|||++||||.|+|||||++|+|.|||+.|+|.
T Consensus 389 ---------~~~p~~rDTv~v~p~~~v~i~f~adnpG~w~~HCHil~H~~~GMm~~~~Vg 439 (439)
T 2xu9_A 389 ---------FPYRAWKDVVNLKAGEVARLLVPLREKGRTVFHCHIVEHEDRGMMGVLEVG 439 (439)
T ss_dssp ---------CSSCCCBSEEEECTTCEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEEC
T ss_pred ---------CCCCCCeEEEEeCCCCEEEEEEEcCCCCCEEEECCcchhhhcCCcEEEEeC
Confidence 237899999999999999999999999999999999999999999999884
No 10
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A
Probab=100.00 E-value=5.3e-83 Score=675.25 Aligned_cols=406 Identities=15% Similarity=0.178 Sum_probs=316.9
Q ss_pred eEEEEEEEEEEEeec-ccceeeEEEECCCCCCCeEeecCCCEEEEEEEeCCCCCceeeeCCCcccCCCCCCCCCCccCCC
Q 008799 23 VRHYNFTVVMTNMTK-LCASKSIVTVNGKFPGPTLHAREDDNVIVRVTNHVKYNVTIHWHGVRQLRTGWYDGPAYITQCP 101 (553)
Q Consensus 23 ~~~~~l~~~~~~~~~-~g~~~~~~~~NG~~pGP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~~ 101 (553)
+++|+|++++..+++ +|..+++|+|||++|||+||+++||+|+|+|+|.|+++|+|||||+++.+. +||+| ||+
T Consensus 18 ~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~~--~DG~~---~~~ 92 (451)
T 2uxt_A 18 GQPLFMTVQRAHWSFTPGTRASVWGINGRYLGPTIRVWKGDDVKLIYSNRLTENVSMTVAGLQVPGP--LMGGP---ARM 92 (451)
T ss_dssp SCCEEEEEEECCGGGCSSSSSCCEEETTSSBCCEEEEETTCEEEEEEEECSSSCBCEEEETCCCCGG--GSCSG---GGC
T ss_pred ceEEEEEEEEEEEEcCCCceeEEEEECCcccCceEEEeCCCEEEEEEEECCCCCccEEECCccCCCC--CCCCC---cCc
Confidence 578999999999998 799999999999999999999999999999999999999999999999987 99998 899
Q ss_pred CCCCCceEEEEEeCCCCcceEEecChhh----hh-ccceeeEEEcCCCCCCCCCCC--CCcceEEEEeeeeccCHHHHHH
Q 008799 102 IQPGQSYVYNFTLTGQRGTLLWHAHISW----LR-ATVHGAIVILPKRSVPYPFPK--ADKEKIIVFGEWWKADVEAVIN 174 (553)
Q Consensus 102 i~pG~~~~y~~~~~~~~Gt~wYH~H~~~----~~-~Gl~G~liV~~~~~~~~~~~~--~~~e~~l~~~d~~~~~~~~~~~ 174 (553)
|.||++|+|+|++++++||||||||.++ |. +||+|+|||+++.+...+++. .++|++|+++||+++...+...
T Consensus 93 i~PG~~~~Y~f~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~~~~p~~y~~~e~~l~l~D~~~~~~~~~~~ 172 (451)
T 2uxt_A 93 MSPNADWAPVLPIRQNAATLWYHANTPNRTAQQVYNGLAGMWLVEDEVSKSLPIPNHYGVDDFPVIIQDKRLDNFGTPEY 172 (451)
T ss_dssp BCTTCEECCEEECCSCSEEEEEEECCTTTHHHHHHTTCEEEEEEECHHHHHSSSCCCBTTTEEEEEEEEEEECTTSCEEC
T ss_pred CCCCCeEEEEEEcCCCCcceEEecCCCCchhhhHhhcceEEEEEecCcccccCCCccCCCceEEEEEEeeecCCCCceec
Confidence 9999999999999556999999999844 44 899999999998654333333 4789999999999875433210
Q ss_pred HHHhCCCCCCCCceEEECCcCCCCCCCCCCCeEEEEEcCCEEEEEEEecCCCceEEEEE-cCceEEEEeeCCCcc-cceE
Q 008799 175 QATQMGVAPNVSDAHTINGHPGPVTNCTSQGFTLHVESGKTYLLRIVNAAVNDELFFKI-AGHNLTVVEVDSSYT-KPFK 252 (553)
Q Consensus 175 ~~~~~g~~~~~~~~~~iNG~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i-~gh~~~via~DG~~~-~p~~ 252 (553)
...+.....+++++|||+.+ |.++|++| +|||||||+|+.+.+.|+| +||+|+||++||.++ +|+.
T Consensus 173 --~~~~~~~~~~d~~liNG~~~---------p~~~v~~g-~~RlRliNa~~~~~~~~~i~dg~~~~vi~~DG~~~~~P~~ 240 (451)
T 2uxt_A 173 --NEPGSGGFVGDTLLVNGVQS---------PYVEVSRG-WVRLRLLNASNSRRYQLQMNDGRPLHVISGDQGFLPAPVS 240 (451)
T ss_dssp --CCCSSSCCCCSEEEETTEES---------CEEEECSS-EEEEEEEECCSSCCEEEEETTSCCEEEEECSSSEEEEEEE
T ss_pred --ccccCCCCcCCEEEECCccc---------ceEEecCC-EEEEEEEccCCceeEEEEECCCCeEEEEEeCCCccCCceE
Confidence 01222345679999999987 88999999 9999999999999999999 899999999999997 8999
Q ss_pred eeEEEeCCCccEEEEEEeCCCCCeeEEEEeeccccccc-------cCCccEEEEEEEcCCCCCCCCccCCCCCCCCcccc
Q 008799 253 TDTIFIGPGQTTNALLTADKKIGKYLITISPFMDTIVA-------VNNVTGIAFLRYKGTVAFSSTTLTNVPAINATEVT 325 (553)
Q Consensus 253 ~d~~~l~pgeR~dv~v~~~~~~g~~~i~~~~~~~~~~~-------~~~~~~~ail~y~~~~~~~~~~~~~~p~~~~~~~~ 325 (553)
++++.|+|||||||+|++++ ++.|++++......... .......++++|.......+. ...+|
T Consensus 241 ~~~l~l~pgeR~dvlv~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~-~~~~p-------- 310 (451)
T 2uxt_A 241 VKQLSLAPGERREILVDMSN-GDEVSITCGEAASIVDRIRGFFEPSSILVSTLVLTLRPTGLLPLV-TDSLP-------- 310 (451)
T ss_dssp ESSEEECTTCEEEEEEECTT-CCCEEEEC----------------CCCCSCCEEEEEEECSCCC-----CCC--------
T ss_pred eceEEECceeEEEEEEEeCC-CCEEEEEecCccccccccccccccCCCCCCcceEEEEecCCCcCc-cccCc--------
Confidence 99999999999999999997 58999998754321110 112233577888754321110 00111
Q ss_pred cccccccccccCCCCCCCCCCCcceEEEEEeeeeccCCccCCCCceeeEeeeceeeecCCchhhhhhhccccccccCCCC
Q 008799 326 NTFSDNLRSLNSKRYPAKVPLTVDHSLLLTMAVAVNPCATCPNGTKVGAAMNNISFVMPTTALLQAHYYKISGVFTDDFP 405 (553)
Q Consensus 326 ~~~~~~l~~l~~~~~p~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 405 (553)
..|.++... + .+...++++.+ . + .|++||++|..++
T Consensus 311 ----~~L~~~~~~--~--~~~~~~~~~~l--~-----------~---~~~iNg~~f~~~~-------------------- 346 (451)
T 2uxt_A 311 ----MRLLPTEIM--A--GSPIRSRDISL--G-----------D---DPGINGQLWDVNR-------------------- 346 (451)
T ss_dssp ----SCSSSSCCC--C--CCCSEEEEEEE--C-----------S---SSSBTTBCCCTTC--------------------
T ss_pred ----cccCCCCCC--C--CCCcceEEEEE--e-----------e---EEEECCEeCCCCC--------------------
Confidence 112222111 1 12222333322 1 1 3888988764221
Q ss_pred CCCCeeeccCCCCCCccccCCCeeEEEecCCCEEEEEEEcCCCCCCCCCCeeecCCceEEEeeCCCCCCCCCCCCCCCCC
Q 008799 406 AKPPIAFNYTGNYTGTLQTTNGTRLYRLAYNSTVQLVLQGTTVIAPENHPTHLHGFNFFAVGKGSGNFDPNKDPQKFNLV 485 (553)
Q Consensus 406 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~i~n~~~~~~~~HP~HlHG~~f~Vl~~g~g~~~~~~~~~~~~~~ 485 (553)
..+.++.|++|+|+|+|. +.||||||||+|||++++.. .+++.
T Consensus 347 -----------------------~~~~~~~G~~~~~~l~N~-----~~HP~HLHGh~F~Vl~~~G~---------~~~~~ 389 (451)
T 2uxt_A 347 -----------------------IDVTAQQGTWERWTVRAD-----EPQAFHIEGVMFQIRNVNGA---------MPFPE 389 (451)
T ss_dssp -----------------------CCEEEETTCEEEEEEEEE-----EEEEEEETTCEEEEEEETTB---------CCCGG
T ss_pred -----------------------CcEEcCCCCEEEEEEECC-----CCcCeEECCceEEEEeeCCc---------CCCcc
Confidence 124678999999999994 48999999999999999622 34567
Q ss_pred CCCcceeeEecCCcEEEEEEEecCcee----eEEeecchhhHhccceEEEEEeCCCC
Q 008799 486 DPVERNTISVPTAGWTAIRFRADNPGV----WFLHCHLEVHTSWGLKMAFVVDNGKG 538 (553)
Q Consensus 486 ~p~~rDTv~vp~~g~~~irf~adnpG~----w~~HCHil~H~d~GM~~~~~V~~~~~ 538 (553)
+|.|||||.| +++++|+|++||||. |||||||++|+|.|||++|+|.+.+.
T Consensus 390 ~p~~rDTv~v--g~~~~i~~~~dnpg~~~g~w~~HCHil~H~d~GMm~~~~v~~~~~ 444 (451)
T 2uxt_A 390 DRGWKDTVWV--DGQVELLVYFGQPSWAHFPFYFNSQTLEMADRGSIGQLLVNPVPR 444 (451)
T ss_dssp GSSCBSEEEE--EEEEEEEEECCSCCBTTBCEEEEESSHHHHHTTCEEEEEEECSCC
T ss_pred cCCCccEEEE--CCEEEEEEEeCCCCCCCCceEEeCCchhHHhCCCcEEEEEccCcc
Confidence 8999999999 899999999999988 99999999999999999999987554
No 11
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A*
Probab=100.00 E-value=1.9e-81 Score=674.24 Aligned_cols=421 Identities=18% Similarity=0.238 Sum_probs=319.2
Q ss_pred ceEEEEEEEEEEE--eecccceeeEEEECCCCCCCeEeecCCCEEEEEEEeCCCCCceeeeCCCcccCCCCCCCCCCccC
Q 008799 22 AVRHYNFTVVMTN--MTKLCASKSIVTVNGKFPGPTLHAREDDNVIVRVTNHVKYNVTIHWHGVRQLRTGWYDGPAYITQ 99 (553)
Q Consensus 22 ~~~~~~l~~~~~~--~~~~g~~~~~~~~NG~~pGP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq 99 (553)
..++|+|++++.. +.++|..+.+|+|||++|||+||+++||+|+|+|+|+|+++|+|||||+++.+. +||++ |
T Consensus 35 ~~~~~~l~~~~~~~~~~p~~~~~~~~~~NG~~PGPtI~~~~Gd~v~v~v~N~l~~~tsiHwHGl~~~~~--~DG~~---~ 109 (534)
T 3abg_A 35 EIWYYEVEIKPFTHQVYPDLGSADLVGYDGMSPGPTFQVPRGVETVVRFINNAEAPNSVHLHGSFSRAA--FDGWA---E 109 (534)
T ss_dssp CCEEEEEEEECCEECCSTTTCCEECBEETSCSSEEEEEEETTCCEEEEEEECSSSCBCEEEETCCCCTT--TTTCS---S
T ss_pred ceEEEEEEEEEEEEEecCCCCceeEEEECCcCcCceEEEeCCcEEEEEEEECCCCCceEEECCCcCCCC--CCCCC---C
Confidence 3578999999655 566788899999999999999999999999999999999999999999998764 99975 7
Q ss_pred CCCCCCCceEEEEEeCCCCcceEEecChhhhh-----ccceeeEEEcCCCCCCCCCCC--CCcceEEEEeeeeccCHHHH
Q 008799 100 CPIQPGQSYVYNFTLTGQRGTLLWHAHISWLR-----ATVHGAIVILPKRSVPYPFPK--ADKEKIIVFGEWWKADVEAV 172 (553)
Q Consensus 100 ~~i~pG~~~~y~~~~~~~~Gt~wYH~H~~~~~-----~Gl~G~liV~~~~~~~~~~~~--~~~e~~l~~~d~~~~~~~~~ 172 (553)
|+|.||++|+|+|++.+++||||||||.++++ +||+|+|||+++.+...+++. .++|++|+++||+.+....+
T Consensus 110 ~~i~PG~~~~Y~f~~~~~~GT~WYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~~~lp~~~~~~d~~l~l~d~~~~~~g~~ 189 (534)
T 3abg_A 110 DITEPGSFKDYYYPNRQSARTLWYHDHAMHITAENAYRGQAGLYMLTDPAEDALNLPSGYGEFDIPMILTSKQYTANGNL 189 (534)
T ss_dssp SCBSSCSCCCEEECCCSSSCEEEEEECCTTCHHHHHHTBCEEEEEEECTTTTTSCTTCCHHHHSCCEEEEEECBCSSSCB
T ss_pred CCCCCCCeEEEEEecCCcceeEEEecCccccchhhhhhcceEEEEEECCcccccCCCccCCcceEEEEEeeeeecCCCce
Confidence 99999999999999866689999999998643 899999999998876555544 36789999999987654322
Q ss_pred HHHHHhCC-CCCCCCceEEECCcCCCCCCCCCCCeEEEEEcCCEEEEEEEecCCCceEEEEEcC-------ceEEEEeeC
Q 008799 173 INQATQMG-VAPNVSDAHTINGHPGPVTNCTSQGFTLHVESGKTYLLRIVNAAVNDELFFKIAG-------HNLTVVEVD 244 (553)
Q Consensus 173 ~~~~~~~g-~~~~~~~~~~iNG~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~g-------h~~~via~D 244 (553)
.. ..+ .....+|.++|||+.+ +.++|++ ++|||||||+|+.+.+.|+|++ |+|+|||+|
T Consensus 190 ~~---~~~~~~~~~gd~~lvNG~~~---------p~~~v~~-~~~RlRliNa~~~~~~~l~i~~~~~~~~~h~~~vIa~D 256 (534)
T 3abg_A 190 VT---TNGELNSFWGDVIHVNGQPW---------PFKNVEP-RKYRFRFLDAAVSRSFGLYFADTDAIDTRLPFKVIASD 256 (534)
T ss_dssp CC---CTTCSSCCCCSEEEETTEES---------CBCBCCS-SEEEEEEEECCSSCCEEEEECCSSSTTCCCCEEEEEET
T ss_pred ec---cCCCCccccCceeccCCccC---------ceEEecC-cEEEEEEEecCCcceEEEEEecccCcCCCccEEEEEeC
Confidence 11 011 1234578999999988 7789998 5899999999999999999987 999999999
Q ss_pred CCc-ccceEeeEEEeCCCccEEEEEEeCCCCC-eeEEEEeeccc-ccc-ccCCccEEEEEEEcCCCCCCCCccCCCCCCC
Q 008799 245 SSY-TKPFKTDTIFIGPGQTTNALLTADKKIG-KYLITISPFMD-TIV-AVNNVTGIAFLRYKGTVAFSSTTLTNVPAIN 320 (553)
Q Consensus 245 G~~-~~p~~~d~~~l~pgeR~dv~v~~~~~~g-~~~i~~~~~~~-~~~-~~~~~~~~ail~y~~~~~~~~~~~~~~p~~~ 320 (553)
|++ .+|+.++++.|+|||||||+|++++.+| .|+|++..... +.. ..+.....++++|..............|
T Consensus 257 G~~~~~P~~~~~l~l~pgeR~dvlv~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~P--- 333 (534)
T 3abg_A 257 SGLLEHPADTSLLYISMAERYEVVFDFSDYAGKTIELRNLGGSIGGIGTDTDYDNTDKVMRFVVADDTTQPDTSVVP--- 333 (534)
T ss_dssp TEEEEEEEEESCEEECTTCEEEEEEECSSCTTSEEEEECCCCSSSSCCSCSSSTTTSEEEEEECCCCSSCSCCCCCC---
T ss_pred CCcccCceEeceEEECCccEEEEEEEcCCCCCceEEEEeccccccccccccCcCCcceeEEEecCCCCcCCCCCCCc---
Confidence 986 4899999999999999999999998667 69998753211 110 0111233578888754321000000011
Q ss_pred CcccccccccccccccCCCCCCCCCCCcceEEEEEeeeeccCCccCCCCceeeEeeeceeeecCCchhhhhhhccccccc
Q 008799 321 ATEVTNTFSDNLRSLNSKRYPAKVPLTVDHSLLLTMAVAVNPCATCPNGTKVGAAMNNISFVMPTTALLQAHYYKISGVF 400 (553)
Q Consensus 321 ~~~~~~~~~~~l~~l~~~~~p~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~p~~~~~~~~~~~~~~~~ 400 (553)
..|+.+.. + ..+...++++.+ ... ...|++||++|..+..
T Consensus 334 ---------~~L~~~~~---p-~~~~~~~~~~~~--~~~-----------~~~w~iNG~~f~~~~~-------------- 373 (534)
T 3abg_A 334 ---------ANLRDVPF---P-SPTTNTPRQFRF--GRT-----------GPTWTINGVAFADVQN-------------- 373 (534)
T ss_dssp ---------CCCCCCSC---C-CCCCCCCEEEEC--SCC-----------CSTTCCCCBTTBCTTS--------------
T ss_pred ---------cccccCCC---C-CCccccceEEEE--ecc-----------CceeEECCcccCCCCC--------------
Confidence 11222111 1 112223444432 110 1248899987743211
Q ss_pred cCCCCCCCCeeeccCCCCCCccccCCCeeEEEecCCCEEEEEEEcCCCCCCCCCCeeecCCceEEEeeCCCCCCCCCCCC
Q 008799 401 TDDFPAKPPIAFNYTGNYTGTLQTTNGTRLYRLAYNSTVQLVLQGTTVIAPENHPTHLHGFNFFAVGKGSGNFDPNKDPQ 480 (553)
Q Consensus 401 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~i~n~~~~~~~~HP~HlHG~~f~Vl~~g~g~~~~~~~~~ 480 (553)
| ....++.|++++|+|+|.+ ..+.||||||||+|||++++.|.+.. .
T Consensus 374 --------p-------------------~l~~v~~G~~~~w~i~N~~--~~~~HP~HLHG~~F~Vl~~~~g~~~~----~ 420 (534)
T 3abg_A 374 --------R-------------------LLANVPVGTVERWELINAG--NGWTHPIHIHLVDFKVISRTSGNNAR----T 420 (534)
T ss_dssp --------C-------------------CCCEECTTCEEEEEEEECS--SSCCCCEEESSCCEEEEEESSCCSSS----C
T ss_pred --------c-------------------ceeeccCCCEEEEEEEcCC--CCCCcCEEECCeeEEEEEEcCCCCcC----c
Confidence 0 0135678999999999964 24689999999999999996554321 1
Q ss_pred CCCCCCCCcceeeEecCCcEEEEEEE-ecCceeeEEeecchhhHhccceEEEEEeCCC
Q 008799 481 KFNLVDPVERNTISVPTAGWTAIRFR-ADNPGVWFLHCHLEVHTSWGLKMAFVVDNGK 537 (553)
Q Consensus 481 ~~~~~~p~~rDTv~vp~~g~~~irf~-adnpG~w~~HCHil~H~d~GM~~~~~V~~~~ 537 (553)
..++.+ .|||||.|+|+++++|||+ +||||.|+|||||++|+|.|||+.|.|...+
T Consensus 421 ~~~~~~-~~rDTV~v~pg~~v~I~~~~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~ 477 (534)
T 3abg_A 421 VMPYES-GLKDVVWLGRRETVVVEAHYAPFPGVYMFHCHNLIHEDHDMMAAFNATVLP 477 (534)
T ss_dssp CCSGGG-SCBSEECCCSSEEEEEEEECCSCCEEEEEEESCHHHHHTTCEEEEEECSSC
T ss_pred CCcccc-CCcCeEEcCCCCEEEEEEEECCCCccEEEecChHHHHhcCCceEEEEEecc
Confidence 234555 8999999999999999999 8999999999999999999999999998766
No 12
>2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A
Probab=100.00 E-value=1.2e-80 Score=668.11 Aligned_cols=429 Identities=17% Similarity=0.221 Sum_probs=315.9
Q ss_pred eEEEEEEEEEEEeec--ccceeeEEEECCCCCCCeEeecCCCEEEEEEEeCCCC----------------------Ccee
Q 008799 23 VRHYNFTVVMTNMTK--LCASKSIVTVNGKFPGPTLHAREDDNVIVRVTNHVKY----------------------NVTI 78 (553)
Q Consensus 23 ~~~~~l~~~~~~~~~--~g~~~~~~~~NG~~pGP~i~v~~Gd~v~v~l~N~l~~----------------------~~~i 78 (553)
...|+|++++...++ ++..+++|+|||++|||+||+++||+|+|+|+|+|++ +|+|
T Consensus 25 ~~~~~l~~~~~~~~~~~~~~~~~~~~~NG~~PGPtI~~~~Gd~v~v~v~N~L~~~~~~~~~~t~~~~~~~~~~~~~~tsi 104 (513)
T 2wsd_A 25 KTYYEVTMEECTHQLHRDLPPTRLWGYNGLFPGPTIEVKRNENVYVKWMNNLPSTHFLPIDHTIHHSDSQHEEPEVKTVV 104 (513)
T ss_dssp CEEEEEEEEEEEECSSTTSCCEEEEEETTBSSCCBEEEETTCCEEEEEEECCCSSCSSCCCTTSCC-----CCCSCCBCE
T ss_pred ceEEEEEEEEeeeeeCCCCCCceEEEECCCccCceEEECCCCEEEEEEEeCCCccccCccccccccccccccCCCCCcEE
Confidence 455999999988766 3468999999999999999999999999999999975 8999
Q ss_pred eeCCCcccCCCCCCCCCC--ccCCCCCCCCce---EEEEEeCCCCcceEEecChhh----hh-ccceeeEEEcCCCCCCC
Q 008799 79 HWHGVRQLRTGWYDGPAY--ITQCPIQPGQSY---VYNFTLTGQRGTLLWHAHISW----LR-ATVHGAIVILPKRSVPY 148 (553)
Q Consensus 79 H~HG~~~~~~~~~DGv~~--~tq~~i~pG~~~---~y~~~~~~~~Gt~wYH~H~~~----~~-~Gl~G~liV~~~~~~~~ 148 (553)
||||+++.+. +||+|+ ++||+|.||++| +|+|++.+++||||||||.++ |. +||+|+|||+++.+...
T Consensus 105 HwHGl~~~~~--~DG~p~~~i~~g~i~pG~~f~~~~Y~f~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~~ 182 (513)
T 2wsd_A 105 HLHGGVTPDD--SDGYPEAWFSKDFEQTGPYFKREVYHYPNQQRGAILWYHDHAMALTRLNVYAGLVGAYIIHDPKEKRL 182 (513)
T ss_dssp EEETCCCCGG--GSCCTTSCBCGGGSSBCTTCCCSEEEECCCSCCEEEEEEECCTTTHHHHHHHTCEEEEEEECGGGGGG
T ss_pred EcCCCcCCCc--cCCCCcccccCCcccCCCccceEEEEEecCCCccceEECCCCCCcchhhhhccCeEEEEEeccccccc
Confidence 9999998854 999996 789999999555 999998668999999999975 33 89999999999876655
Q ss_pred CCCCCCcceEEEEeeeeccCHHHHHHHHH----------hCCCCCCCCceEEECCcCCCCCCCCCCCeEEEEEcCCEEEE
Q 008799 149 PFPKADKEKIIVFGEWWKADVEAVINQAT----------QMGVAPNVSDAHTINGHPGPVTNCTSQGFTLHVESGKTYLL 218 (553)
Q Consensus 149 ~~~~~~~e~~l~~~d~~~~~~~~~~~~~~----------~~g~~~~~~~~~~iNG~~~~~~~~~~~~~~~~v~~G~~~rl 218 (553)
+++.+++|++|+++||+++...++..... ........+++++|||+.+ +.+++++| +|||
T Consensus 183 ~lp~~d~d~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~liNG~~~---------p~~~v~~~-~~Rl 252 (513)
T 2wsd_A 183 KLPSDEYDVPLLITDRTINEDGSLFYPSAPENPSPSLPNPSIVPAFCGETILVNGKVW---------PYLEVEPR-KYRF 252 (513)
T ss_dssp CCCCGGGEEEEEEEEEEECTTSCEECCSSCSSCCTTSCSSCCCSCCCCSEEEETTEES---------CEEECCSS-EEEE
T ss_pred cCCCCCCcEEEEEEeeecCCCCceecccccccccccccccccccccccceEEECCccc---------ceEEecCC-EEEE
Confidence 56667899999999998765432211000 0011234579999999988 78999985 8999
Q ss_pred EEEecCCCceEEEEEcCc-eEEEEeeCCCcc-cceEeeEEEeCCCccEEEEEEeCCCCCee-EEEEeeccccccccCCcc
Q 008799 219 RIVNAAVNDELFFKIAGH-NLTVVEVDSSYT-KPFKTDTIFIGPGQTTNALLTADKKIGKY-LITISPFMDTIVAVNNVT 295 (553)
Q Consensus 219 RliN~~~~~~~~~~i~gh-~~~via~DG~~~-~p~~~d~~~l~pgeR~dv~v~~~~~~g~~-~i~~~~~~~~~~~~~~~~ 295 (553)
||||+|+.+.+.|+|+|| +|+|||+||.++ +|+.++++.|+|||||||+|++++.+|.+ .+.... .+...+....
T Consensus 253 RliNa~~~~~~~~~i~~~~~~~via~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~~~g~~~~l~~~~--~~~~~~~~~~ 330 (513)
T 2wsd_A 253 RVINASNTRTYNLSLDNGGDFIQIGSDGGLLPRSVKLNSFSLAPAERYDIIIDFTAYEGESIILANSA--GCGGDVNPET 330 (513)
T ss_dssp EEEECCSSCCEEEEETTCCCEEEEEETTEEEEEEEEESEEEECTTCEEEEEEECGGGTTCEEEEEECC--CSSSSCCTTT
T ss_pred EEEccCCcceEEEEECCCCeEEEEccCCCcccCceEeCeEEECCeeeEEEEEECCCCCCcEEEEEecc--cccccCCCCC
Confidence 999999999999999999 999999999998 89999999999999999999999866763 333321 1111112223
Q ss_pred EEEEEEEcCCCCCCCCccCCCCCCCCcccccccccccccccCCCCCCCCCCCcceEEEEEeeeeccCCccCCCCceeeEe
Q 008799 296 GIAFLRYKGTVAFSSTTLTNVPAINATEVTNTFSDNLRSLNSKRYPAKVPLTVDHSLLLTMAVAVNPCATCPNGTKVGAA 375 (553)
Q Consensus 296 ~~ail~y~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~~~p~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (553)
..++++|........+.....|. .+..+. ..+. .+...++++.++..+.. .| ...|.
T Consensus 331 ~~~il~~~~~~~~~~~~~~~~p~------------~l~~~~--~~~~-~~~~~~~~~~l~~~~~~-------~g-~~~~~ 387 (513)
T 2wsd_A 331 DANIMQFRVTKPLAQKDESRKPK------------YLASYP--SVQH-ERIQNIRTLKLAGTQDE-------YG-RPVLL 387 (513)
T ss_dssp TTEEEEEECCSCCSSCCCCCCCS------------BCSCCG--GGCC-CCEEEEEEEEEEEEECT-------TS-CEEEE
T ss_pred CcceEEEEeccCcccCccCCCCc------------cccCCC--Cccc-CCCcceEEEEEEeecCC-------CC-CceEe
Confidence 35778887653211110011111 011100 0010 11123444544433321 12 23577
Q ss_pred eeceeeecCCchhhhhhhccccccccCCCCCCCCeeeccCCCCCCccccCCCeeEEEecCCCEEEEEEEcCCCCCCCCCC
Q 008799 376 MNNISFVMPTTALLQAHYYKISGVFTDDFPAKPPIAFNYTGNYTGTLQTTNGTRLYRLAYNSTVQLVLQGTTVIAPENHP 455 (553)
Q Consensus 376 ~n~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~i~n~~~~~~~~HP 455 (553)
+||++|..+. .+.++.|++|+|+|+|.+ .+.||
T Consensus 388 iNg~~~~~~~--------------------------------------------~~~~~~g~~~~w~l~N~~---~~~HP 420 (513)
T 2wsd_A 388 LNNKRWHDPV--------------------------------------------TETPKVGTTEIWSIINPT---RGTHP 420 (513)
T ss_dssp ETTBCTTSCC--------------------------------------------CBCCBTTCEEEEEEEECS---SSCEE
T ss_pred ECCccCCCcc--------------------------------------------cEecCCCCEEEEEEEcCC---CCCcC
Confidence 8887663210 124568999999999964 57899
Q ss_pred eeecCCceEEEeeCCC---CCCCCC------CCCCCCCCCCCcceeeEecCCcEEEEEEEe-cCceeeEEeecchhhHhc
Q 008799 456 THLHGFNFFAVGKGSG---NFDPNK------DPQKFNLVDPVERNTISVPTAGWTAIRFRA-DNPGVWFLHCHLEVHTSW 525 (553)
Q Consensus 456 ~HlHG~~f~Vl~~g~g---~~~~~~------~~~~~~~~~p~~rDTv~vp~~g~~~irf~a-dnpG~w~~HCHil~H~d~ 525 (553)
||||||+|||++++.+ .|++.. .+......++.|||||.|+++++++|+|++ ||||.|+|||||++|+|.
T Consensus 421 ~HlHG~~F~Vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rDTv~v~pg~~~~i~~~f~dnpG~w~~HCHil~H~~~ 500 (513)
T 2wsd_A 421 IHLHLVSFRVLDRRPFDIARYQESGELSYTGPAVPPPPSEKGWKDTIQAHAGEVLRIAATFGPYSGRYVWHCHALEHEDY 500 (513)
T ss_dssp EEESSCCEEEEEEEEBCHHHHHHHCCCCBSSCCBCCCGGGSSCBSEEEECTTEEEEEEEECCSCCEEEEEEESCHHHHTT
T ss_pred EeEeCceEEEEEecCcccccccccccccccCCCCCCCccccCcccEEEeCCCCEEEEEEEecCCCCCEEEEcCChhhhhc
Confidence 9999999999998742 122110 011122334579999999999999999998 899999999999999999
Q ss_pred cceEEEEEeC
Q 008799 526 GLKMAFVVDN 535 (553)
Q Consensus 526 GM~~~~~V~~ 535 (553)
|||+.|+|.+
T Consensus 501 GMm~~~~V~~ 510 (513)
T 2wsd_A 501 DMMRPMDITD 510 (513)
T ss_dssp TCEEEEEEBC
T ss_pred CCceeEEEeC
Confidence 9999999975
No 13
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp}
Probab=100.00 E-value=8.2e-80 Score=650.62 Aligned_cols=413 Identities=20% Similarity=0.298 Sum_probs=307.9
Q ss_pred cccceEEEEEEEEEEEeec-ccceeeEEEECCCCCCCeEeecCCCEEEEEEEeCCCCCceeeeCCCcccCCCCCCCCCCc
Q 008799 19 VESAVRHYNFTVVMTNMTK-LCASKSIVTVNGKFPGPTLHAREDDNVIVRVTNHVKYNVTIHWHGVRQLRTGWYDGPAYI 97 (553)
Q Consensus 19 ~~~~~~~~~l~~~~~~~~~-~g~~~~~~~~NG~~pGP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~ 97 (553)
+.+..++|+|++++..+++ +|..+++|+|||++|||+||+++||+|+|+|+|.|+++|+|||||+++++ ++||+|
T Consensus 46 ~~~~~~~~~L~~~~~~~~~~~G~~~~~~~~NG~~PGPtIr~~~Gd~v~v~v~N~l~~~tsiHwHGl~~~~--~~DG~p-- 121 (481)
T 3zx1_A 46 KEKNIFHATLEIKENHIELIKGKKTLFYTYNGLVPAPKIEVFEGDKLEILVKNKLKEATTIHWHGVPVPP--DQDGSP-- 121 (481)
T ss_dssp CSTTEEEEEEEEEEEEECCSTTCCEEEEEETTBSSCCBEEEETTCEEEEEEEECSSSCBCCEEETCCCCG--GGSCCT--
T ss_pred cCCCeEEEEEEEEEEEEEccCCcEEEEEEECCCCCCceEEEECCcEEEEEEEeCCCCCeeEEecCcccCC--ccCCCc--
Confidence 5678899999999999997 68999999999999999999999999999999999999999999999864 599986
Q ss_pred cCCCCCCCCceEEEEEeCCC-CcceEEecChhh----hh-ccceeeEEEcCCCCCCCCCCCCCcceEEEEeeeeccCHHH
Q 008799 98 TQCPIQPGQSYVYNFTLTGQ-RGTLLWHAHISW----LR-ATVHGAIVILPKRSVPYPFPKADKEKIIVFGEWWKADVEA 171 (553)
Q Consensus 98 tq~~i~pG~~~~y~~~~~~~-~Gt~wYH~H~~~----~~-~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~ 171 (553)
||+|.||++|+|+|+++++ +||||||||.++ |. +||+|+|||+++.+..+++ ++++ |+++||+.+...+
T Consensus 122 -q~~I~PG~s~~Y~f~~~~~~~GT~WYH~H~~~~t~~q~~~GL~G~lIV~~~~~~~~~~---~~~~-l~l~D~~~~~~g~ 196 (481)
T 3zx1_A 122 -HDPILAGEERIYRFEIPQDSAGTYWYHPHPHYTASKQVFMGLAGAFVIKAKKDALSHL---KEKD-LMISDLRLDENAQ 196 (481)
T ss_dssp -TSCBCTTCEEEEEEECCTTCCEEEEEECCCTTTHHHHHHTTCCEEEEEECSSCTTTTS---EEEE-EEEEEECCBTTSC
T ss_pred -cCcCCCCCeEEEEEeCCCCCCceEEEeecCCCcchhhhhccceEEEEEcCccccccCC---Ccee-EEEEEEeccCCCc
Confidence 8999999999999999543 899999999743 44 8999999999987654433 3455 9999998875432
Q ss_pred HH----HHHHhCCCCCCCCceEEECCcCCCCCCCCCCCeEEEEEcCCEEEEEEEecCCCceEEEEEcCceEEEEeeCCCc
Q 008799 172 VI----NQATQMGVAPNVSDAHTINGHPGPVTNCTSQGFTLHVESGKTYLLRIVNAAVNDELFFKIAGHNLTVVEVDSSY 247 (553)
Q Consensus 172 ~~----~~~~~~g~~~~~~~~~~iNG~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~ 247 (553)
+. ... ..| ..++.++|||+.+ |.++|++|+ ||||||+|+.+.+.|+|+||+|+|||+||.+
T Consensus 197 ~~~~~~~~~-~~g---~~gd~~lvNG~~~---------p~l~v~~g~--RlRliNa~~~~~~~l~i~g~~~~vIa~DGg~ 261 (481)
T 3zx1_A 197 IPNNNLNDW-LNG---REGEFVLINGQFK---------PKIKLATNE--RIRIYNATAARYLNLRIQGAKFILVGTDGGL 261 (481)
T ss_dssp CCCCCHHHH-HHC---CCCSEEEETTEES---------CEEEEETTE--EEEEEECCSSCCEEEEETTCEEEEEEETTEE
T ss_pred cccccchhh-ccC---CcCCEEEECCccC---------ceEEecCCC--EEEEEecCCCeEEEEEECCCceEEEEcCCCc
Confidence 21 000 112 3568999999987 889999998 9999999999999999999999999999887
Q ss_pred c-cceEeeEEEeCCCccEEEEEEeCCCCCeeEEEEeeccccccccC-CccEEEEEEEcCCCCCCCCccCCCCCCCCcccc
Q 008799 248 T-KPFKTDTIFIGPGQTTNALLTADKKIGKYLITISPFMDTIVAVN-NVTGIAFLRYKGTVAFSSTTLTNVPAINATEVT 325 (553)
Q Consensus 248 ~-~p~~~d~~~l~pgeR~dv~v~~~~~~g~~~i~~~~~~~~~~~~~-~~~~~ail~y~~~~~~~~~~~~~~p~~~~~~~~ 325 (553)
+ +|+.++++.|+|||||||+|++++ ++.|.+.+........... ......++++..... .. .+|.
T Consensus 262 ~~~P~~~~~l~l~pgeR~dvlv~~~~-~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--~~---~lP~------- 328 (481)
T 3zx1_A 262 IEKTIYKEELFLSPASRVEVLIDAPK-DGNFKLESAYYDRDKMMVKEEPNTLFLANINLKKE--NV---ELPK------- 328 (481)
T ss_dssp EEEEEEESSEEECTTCEEEEEEECSS-CEEEEEEECCCCCCCSSCCCCCCCEEEEEEEEECC--CC---CCCS-------
T ss_pred cCCceEeCeEEECCccEEEEEEEcCC-CcEEEEEEecccccCccccCCCCceeEEEEecCCC--Cc---cCCc-------
Confidence 6 899999999999999999999997 5889998764332100000 111223333321111 00 1111
Q ss_pred cccccccccccCCCCCCCCCCCcceEEEEEeeeeccCCccCC-CCce-------eeEeeeceeeecCCchhhhhhhcccc
Q 008799 326 NTFSDNLRSLNSKRYPAKVPLTVDHSLLLTMAVAVNPCATCP-NGTK-------VGAAMNNISFVMPTTALLQAHYYKIS 397 (553)
Q Consensus 326 ~~~~~~l~~l~~~~~p~~~p~~~d~~~~~~~~~~~~~~~~~~-~~~~-------~~~~~n~~~~~~p~~~~~~~~~~~~~ 397 (553)
.|..+.. . .. .+++..+.+........... .+.. ..|++||+.|..
T Consensus 329 -----~l~~~~~--~--~~---~~~~r~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iNG~~~~~-------------- 382 (481)
T 3zx1_A 329 -----NLKIFKP--S--EE---PKEFKEIIMSEDHMQMHGMMGKSEGELKIALASMFLINRKSYDL-------------- 382 (481)
T ss_dssp -----CSCCCCC--C--CC---CCEEEEEEEEECCSTTTTGGGCCHHHHHHHHHTTEEETTBCCCT--------------
T ss_pred -----cccCCCC--C--CC---CCcEEEEEEeccchhcccccccccccccccccceeEECCEeCCC--------------
Confidence 1111110 0 11 12333333333210000000 0000 126777765421
Q ss_pred ccccCCCCCCCCeeeccCCCCCCccccCCCeeEEEecCCCEEEEEEEcCCCCCCCCCCeeecCCceEEEeeC-CCCCCCC
Q 008799 398 GVFTDDFPAKPPIAFNYTGNYTGTLQTTNGTRLYRLAYNSTVQLVLQGTTVIAPENHPTHLHGFNFFAVGKG-SGNFDPN 476 (553)
Q Consensus 398 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~i~n~~~~~~~~HP~HlHG~~f~Vl~~g-~g~~~~~ 476 (553)
..+.+.++.|++|+|+|.|.+ .+.|||||||+.|+|++++ .|.
T Consensus 383 -----------------------------~~~~~~~~~G~~v~w~l~N~~---~~~Hp~HlHG~~F~vl~~~~~g~---- 426 (481)
T 3zx1_A 383 -----------------------------KRIDLSSKLGVVEDWIVINKS---HMDHPFHIHGTQFELISSKLNGK---- 426 (481)
T ss_dssp -----------------------------TCCCEEEETTCCEEEEEEECS---SSCEEEEETTCCEEEEEEEETTE----
T ss_pred -----------------------------CCceEEeCCCCEEEEEEEcCC---CCceeEEEeccEEEEEEecccCC----
Confidence 122367889999999999954 6799999999999999983 111
Q ss_pred CCCCCCCCCCCCcceeeEecCCcEEEEEEEecCceeeEEeecchhhHhccceEEEEEe
Q 008799 477 KDPQKFNLVDPVERNTISVPTAGWTAIRFRADNPGVWFLHCHLEVHTSWGLKMAFVVD 534 (553)
Q Consensus 477 ~~~~~~~~~~p~~rDTv~vp~~g~~~irf~adnpG~w~~HCHil~H~d~GM~~~~~V~ 534 (553)
.....++.|||||.|+|+++++|+|++||||.|+|||||++|+|.|||..|+|+
T Consensus 427 ----~~~~~~~~~kDTv~v~Pg~~~~i~~~~d~pG~w~~HCHil~H~d~GMm~~~~V~ 480 (481)
T 3zx1_A 427 ----VQKAEFRALRDTINVRPNEELRLRMKQDFKGLRMYHCHILEHEDLGMMGNLEVK 480 (481)
T ss_dssp ----EEECSSCCEESEEEECTTCEEEEEECCCSCEEEEEEESSHHHHHTTCEEEEEEE
T ss_pred ----CCCcccCcccceEEECCCCEEEEEEEcCCCeeEEEEcCChHHHhcCCceEEEEe
Confidence 112335789999999999999999999999999999999999999999999997
No 14
>3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus}
Probab=100.00 E-value=7.7e-79 Score=672.57 Aligned_cols=463 Identities=17% Similarity=0.210 Sum_probs=308.3
Q ss_pred cceEEEEEEEEEEEeec--ccceeeEEEECCCCCCCeEeecCCCEEEEEEEeCCCCC-----------------------
Q 008799 21 SAVRHYNFTVVMTNMTK--LCASKSIVTVNGKFPGPTLHAREDDNVIVRVTNHVKYN----------------------- 75 (553)
Q Consensus 21 ~~~~~~~l~~~~~~~~~--~g~~~~~~~~NG~~pGP~i~v~~Gd~v~v~l~N~l~~~----------------------- 75 (553)
...+.|+|++++...+. ++..+++|+|||++|||+|+|++||+|+|+|+|+|+++
T Consensus 30 ~~~~~~~i~~~~~~~~~~~~~~~t~~~gyNg~~PGPti~~~~Gd~v~v~~~N~L~~~~~~h~hg~~~~~~~~~~~~~~~~ 109 (612)
T 3gyr_A 30 EVTRETEIALRPTWVRLHPQLPPTLMWGYDGQVPGPTIEVRRGQRVRIAWTNRIPKGSEYPVTSVEVPLGPPGTPAPNTE 109 (612)
T ss_dssp CTTBCEEEEEEEEEECSCTTSCCEEEEEETTBSSCCEEEEETTCCEEEEEEECCCTTCCCSEEEEEECCCSTTSCCGGGS
T ss_pred CCcceEEEEEEEEEEeecCCCCcceEEEECCcccCcEEEEeCCcEEEEEEEECCCCCcccccccccccCCCCCCcccccc
Confidence 44578999999888766 44678999999999999999999999999999999654
Q ss_pred ------------------ceeeeCCCcccCCCCCCCCCCccCCCCCCCCceEEEEEeCCCCcceEEecChhh----hh-c
Q 008799 76 ------------------VTIHWHGVRQLRTGWYDGPAYITQCPIQPGQSYVYNFTLTGQRGTLLWHAHISW----LR-A 132 (553)
Q Consensus 76 ------------------~~iH~HG~~~~~~~~~DGv~~~tq~~i~pG~~~~y~~~~~~~~Gt~wYH~H~~~----~~-~ 132 (553)
|+|||||+++.+ ++||++ ||+|.||++|+|+|++++++||||||||.++ |. +
T Consensus 110 ~~~~~~~~~~~~~~~~~~ttiHwHGl~~~~--~~DGv~---q~~I~PG~~~~Y~f~~~q~~GT~WYHsH~~g~t~~q~~~ 184 (612)
T 3gyr_A 110 PGRGGVEPNKDVAALPAWSVTHLHGAQTGG--GNDGWA---DNAVGFGDAQLSEYPNDHQATQWWYHDHAMNITRWNVMA 184 (612)
T ss_dssp CSCTTCCCCHHHHTCCCCBCEEEETCCCCT--TTSCCG---GGCBCTTCEEEEEECCCSCSEEEEEEECCTTTHHHHTTT
T ss_pred ccccccccccccccCCCCceEEcCCCccCC--cccCcc---cCccCCCCCEEEEEEcCCCCceEEEeeCCCCcchhhhhc
Confidence 678999998865 489875 8999999999999999777899999999854 44 8
Q ss_pred cceeeEEEcCCCCCCCCCCCCCcceEEEEeeeeccCHHHHHHHH-------------Hh---CCCCCCCCceEEECCcCC
Q 008799 133 TVHGAIVILPKRSVPYPFPKADKEKIIVFGEWWKADVEAVINQA-------------TQ---MGVAPNVSDAHTINGHPG 196 (553)
Q Consensus 133 Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~~~~-------------~~---~g~~~~~~~~~~iNG~~~ 196 (553)
||+|+|||+++.+..++++.+++|++|+|+||+++......... .. ....+..++.++|||+.+
T Consensus 185 Gl~G~liI~d~~~~~~~~p~~d~e~~lvl~Dw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gd~~~vNG~~~ 264 (612)
T 3gyr_A 185 GLYGTYLVRDDEEDALGLPSGDREIPLLIADRNLDTDEDGRLNGRLLHKTVIVQQSNPETGKPVSIPFFGPYTTVNGRIW 264 (612)
T ss_dssp TCEEEEEEECHHHHTTTCCCGGGEEEEEEEEECEEECTTSCEEEEEEEEEEEEESSCSSSSCCEECCCCCSEEEETTEES
T ss_pred cceeEEEEcCccccccCCCCCCccEEEEEEEEecccccccccccccccCCccccccCCCCCCccccCccCceeeecCCcc
Confidence 99999999998877777777899999999999775432211000 00 001234568999999987
Q ss_pred CCCCCCCCCeEEEEEcCCEEEEEEEecCCCceEEEEEcCc-------eEEEEeeCCCcc-cceEe------eEEEeCCCc
Q 008799 197 PVTNCTSQGFTLHVESGKTYLLRIVNAAVNDELFFKIAGH-------NLTVVEVDSSYT-KPFKT------DTIFIGPGQ 262 (553)
Q Consensus 197 ~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh-------~~~via~DG~~~-~p~~~------d~~~l~pge 262 (553)
|.+.++.+ +|||||||+|+.+.++|+|++| +|+|||+||+++ +|+.+ +.|.|+|||
T Consensus 265 ---------p~~~v~~~-~yRlRliNas~~~~~~l~i~~h~~~~~~~~~~vIa~DG~~l~~Pv~v~~p~~~~~l~i~pGe 334 (612)
T 3gyr_A 265 ---------PYADVDDG-WYRLRLVNASNARIYNLVLIDEDDRPVPGVVHQIGSDGGLLPRPVPVDFDDTLPVLSAAPAE 334 (612)
T ss_dssp ---------CEEEEESS-EEEEEEEECCSSCCEEEEEECTTSCBCTTSEEEEEETTEEEEEEEEECSSSSSSSEEECTTC
T ss_pred ---------ceEeccCc-EEEEEEEeccCCcceeEEEccCCCccCCceEEEEEeCCCccccceeccCcccccEEEeccce
Confidence 78888864 7999999999999999999988 599999999998 56655 489999999
Q ss_pred cEEEEEEeCCCCCeeEEEEeeccccc----cccCCccEEEEEEEcCCCCCCCCccCCCCCCCCcccccccccccccccCC
Q 008799 263 TTNALLTADKKIGKYLITISPFMDTI----VAVNNVTGIAFLRYKGTVAFSSTTLTNVPAINATEVTNTFSDNLRSLNSK 338 (553)
Q Consensus 263 R~dv~v~~~~~~g~~~i~~~~~~~~~----~~~~~~~~~ail~y~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~ 338 (553)
||||+|++++.+|.++.......... ..........+++|.......... ...|...... ..
T Consensus 335 RydVlV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~p~~~~~~--------~~----- 400 (612)
T 3gyr_A 335 RFDLLVDFRALGGRRLRLVDKGPGAPAGTPDPLGGVRYPEVMEFRVRETCEEDS-FALPEVLSGS--------FR----- 400 (612)
T ss_dssp EEEEEEECTTCTTCEEEEEECCTTSCTTSCBGGGTBSCCEEEEEEEECCSCCCC-CCCCSSCCSS--------CC-----
T ss_pred EEEEEEECCCCCceEEEEEecCCcCCcCccCccccccccceeeecccCCCCCCc-cccccccccc--------cc-----
Confidence 99999999987665544332211111 011122334555555332211100 0111100000 00
Q ss_pred CCCCCCCCCcceEEEEEeeeeccCCccCCCCceeeEeeeceee----ecCCchhhhhhhccccccccCCCCCCCCeeecc
Q 008799 339 RYPAKVPLTVDHSLLLTMAVAVNPCATCPNGTKVGAAMNNISF----VMPTTALLQAHYYKISGVFTDDFPAKPPIAFNY 414 (553)
Q Consensus 339 ~~p~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~----~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 414 (553)
......+ ...... ....... .........+.+..... ..+....+. .......+..+.
T Consensus 401 ~~~~~~~--~~~~~~-~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~- 462 (612)
T 3gyr_A 401 RMSHDIP--HGHRLI-VLTPPGT---KGSGGHPEIWEMAEVEDPADVQVPAEGVIQ-----------VTGADGRTKTYR- 462 (612)
T ss_dssp CCCTTSC--CEEEEE-EEECTTC---TTTTTCCEEEEEEECC-----CCSCTTEEE-----------EECTTSCEEEEE-
T ss_pred ccccccc--cccccc-ccccccc---ccccccccccccccccccccccccccceee-----------eccCCCcccccc-
Confidence 0000000 001110 0000000 00000011111111100 000000000 000000011111
Q ss_pred CCCCCCccccCCCeeEEEecCCCEEEEEEEcCCCCCCCCCCeeecCCceEEEeeCCCCCCCC---C------------CC
Q 008799 415 TGNYTGTLQTTNGTRLYRLAYNSTVQLVLQGTTVIAPENHPTHLHGFNFFAVGKGSGNFDPN---K------------DP 479 (553)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~g~~v~~~i~n~~~~~~~~HP~HlHG~~f~Vl~~g~g~~~~~---~------------~~ 479 (553)
.+.....+...+.++.|++|+|+|+|.+ .+.||||||||+||||+++.+.++.. . ..
T Consensus 463 -----~n~~~~~~~~~~~~~~g~~~~w~i~N~~---~~~HP~HLHG~~F~Vl~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 534 (612)
T 3gyr_A 463 -----RTARTFNDGLGFTIGEGTHEQWTFLNLS---PILHPMHIHLADFQVLGRDAYDASGFDLALGGTRTPVRLDPDTP 534 (612)
T ss_dssp -----EEECSTTSCCCEEEETTCEEEEEEEECS---SSCEEEEESSCEEEEEEEEEEECTTEETTTTEESSCEEEEEEEE
T ss_pred -----ccCccCCCCcceEeCCCCEEEEEEEcCC---CCCcCEeECCCcEEEEeecCCcCccccccccccccccccccccc
Confidence 1222233445578899999999999965 67899999999999999864322210 0 11
Q ss_pred CCCCCCCCCcceeeEecCCcEEEEEEE-ecCceeeEEeecchhhHhccceEEEEEeCCCC
Q 008799 480 QKFNLVDPVERNTISVPTAGWTAIRFR-ADNPGVWFLHCHLEVHTSWGLKMAFVVDNGKG 538 (553)
Q Consensus 480 ~~~~~~~p~~rDTv~vp~~g~~~irf~-adnpG~w~~HCHil~H~d~GM~~~~~V~~~~~ 538 (553)
...+..++.|||||.|+++++++|||+ +||||.|||||||++|||.|||+.|+|.+++.
T Consensus 535 ~~~~~~~~~~kDTv~v~~~~~v~i~~rfadnpG~w~~HCHil~Hed~GMM~~f~V~~p~~ 594 (612)
T 3gyr_A 535 VPLAPNELGHKDVFQVPGPQGLRVMGKFDGAYGRFMYHCHLLEHEDMGMMRPFVVMPPEA 594 (612)
T ss_dssp CCCCTTCSSCBSEEEECSSEEEEEEEECCSCCEEEEEEESSHHHHHTTCEEEEEEECHHH
T ss_pred cCcccccCCCCcEEEECCCCEEEEEEEeCCCCcceEEcCCChHHHhCcCCcceEEeCCcc
Confidence 235567889999999999999999999 69999999999999999999999999987644
No 15
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum}
Probab=100.00 E-value=4.4e-79 Score=644.24 Aligned_cols=396 Identities=19% Similarity=0.291 Sum_probs=300.0
Q ss_pred eEEEEEEEEEEEeecccceeeEEEECCC-CCCCeEeecCCCEEEEEEEeCCCCCceeeeCCCcccCCCCCCCCCCccCCC
Q 008799 23 VRHYNFTVVMTNMTKLCASKSIVTVNGK-FPGPTLHAREDDNVIVRVTNHVKYNVTIHWHGVRQLRTGWYDGPAYITQCP 101 (553)
Q Consensus 23 ~~~~~l~~~~~~~~~~g~~~~~~~~NG~-~pGP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~~ 101 (553)
.++|+|++ |+|||+ +|||+||+++||+|+|+|+|.|+++|+|||||+++.+ ++||+|+ |+
T Consensus 20 ~~~~~l~~--------------~~~Ng~~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~--~~DG~~~---~~ 80 (448)
T 3aw5_A 20 ATYIEATA--------------SGYMAEGVLNPTIILRRGQRVDMTLKNKLTEPTIVHWHGFDVNW--HNDAHPS---FA 80 (448)
T ss_dssp CSEEEEET--------------TEEEETTEESCEEEEETTCEEEEEEEECSSSCBCEEEETCCCCH--HHHTCGG---GC
T ss_pred CcEEEEEE--------------EEECCccccCceEEEeCCCEEEEEEEECCCCceeEEeCCccCCC--ccCCCCC---cc
Confidence 45677776 899999 9999999999999999999999999999999999874 4999997 99
Q ss_pred CCCCCceEEEEEeCCCCcceEEecC----hhhhh-ccceeeEEEcCCCCCCCCCCCCCcceEEEEeeeeccCHHHHHHHH
Q 008799 102 IQPGQSYVYNFTLTGQRGTLLWHAH----ISWLR-ATVHGAIVILPKRSVPYPFPKADKEKIIVFGEWWKADVEAVINQA 176 (553)
Q Consensus 102 i~pG~~~~y~~~~~~~~Gt~wYH~H----~~~~~-~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~~~~ 176 (553)
|.||++|+|+|++++++|||||||| ...|. +||+|+|||+++.+. .+++...+|++|+++||++++ .++....
T Consensus 81 i~PG~~~~Y~f~~~~~~GT~wYH~H~~~~~~~q~~~Gl~G~liV~~~~~~-~~l~~d~~e~~l~l~D~~~~~-~~~~~~~ 158 (448)
T 3aw5_A 81 ITPGESYNYSFDVVNRAGTYLYHPHPHGLTAKQFYMGQLGLVIVEDSGSD-LGFKYGVNDLPLVISDRRFIG-GAPVYNP 158 (448)
T ss_dssp BCTTCEEEEEEECCSCSEEEEEEECCTTTHHHHHHTTCCEEEEEECTTTT-TTCCBTTTEEEEEEEEEEEET-TEEECCC
T ss_pred CCCCCEEEEEEEcCCCCCceEeccCCCCchHHHHhccceEEEEEeCCccc-cCCCCCCceEEEEEEeeccCC-Ccccccc
Confidence 9999999999999558999999999 44565 899999999998765 333322389999999999876 3321100
Q ss_pred -HhCCCCCCCCceEEECCcCCCCCCCCCCCeEEEEEcCCEEEEEEEecCCCceEEEEE--cC---ceEEEEeeCCCccc-
Q 008799 177 -TQMGVAPNVSDAHTINGHPGPVTNCTSQGFTLHVESGKTYLLRIVNAAVNDELFFKI--AG---HNLTVVEVDSSYTK- 249 (553)
Q Consensus 177 -~~~g~~~~~~~~~~iNG~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i--~g---h~~~via~DG~~~~- 249 (553)
...+.....++.++|||+.+ +.++|++| +|||||||+|+.+.+.|+| +| |+|+|||+||.+++
T Consensus 159 ~~~~~~~~~~~~~~liNG~~~---------p~~~v~~g-~~RlRliNa~~~~~~~~~i~~~~~~~~~~~via~DG~~~~~ 228 (448)
T 3aw5_A 159 TPMEMIAGFLGNAVLVNGVKD---------AVFKLSGG-SYRLRLVNGSNARLYMLSIVKKNGDVVPMRLIAVDQGFLAR 228 (448)
T ss_dssp CHHHHHHCCCCSEEEETTEET---------CEEEEEEE-EEEEEEEECSSSCCEEEEEEETTSCEECEEEEEETTEEEEE
T ss_pred cccccccCccccEEEECCccc---------ceEEECCC-eEEEEEEcCCCcceEEEEEEcCCCCCccEEEEEeCCCccCC
Confidence 00001124568999999987 88999999 9999999999999999999 99 99999999999997
Q ss_pred ceEeeEEEeCCCccEEEEEEeCCCCCeeEEEEeecccccc----------ccCCccEEEEEEEcCCCCCCCCccCCCCCC
Q 008799 250 PFKTDTIFIGPGQTTNALLTADKKIGKYLITISPFMDTIV----------AVNNVTGIAFLRYKGTVAFSSTTLTNVPAI 319 (553)
Q Consensus 250 p~~~d~~~l~pgeR~dv~v~~~~~~g~~~i~~~~~~~~~~----------~~~~~~~~ail~y~~~~~~~~~~~~~~p~~ 319 (553)
|+.++++.|+|||||||+|++++ +.|+|++.+...+.. ........++++|.+....+. |.
T Consensus 229 P~~~~~l~l~pgeR~dvlv~~~~--~~y~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------p~- 299 (448)
T 3aw5_A 229 PIEVRALFLAPAERAEVVVELGE--GVYLLKNTPFDPMHLEMGHGMQEALPEGSEYTIATFLVEGKGEAVP------VE- 299 (448)
T ss_dssp EEEESCEEECTTCEEEEEEEECS--EEEEEEECCCCCCCCTTSSCCCCSSCTTSCEEEEEEEEEEECCCCC------CC-
T ss_pred ceEeceEEECCcceEEEEEECCC--CceEEEccccccccCccccccccccCCCCCceEEEEEEcCCCCCCC------cc-
Confidence 99999999999999999999983 799999876543211 011234567778865432110 10
Q ss_pred CCcccccccccccccccCCCCCCCCCCCcceEEEEEeeeeccCCccCCCCceeeEeeeceeeecCCchhhhhhhcccccc
Q 008799 320 NATEVTNTFSDNLRSLNSKRYPAKVPLTVDHSLLLTMAVAVNPCATCPNGTKVGAAMNNISFVMPTTALLQAHYYKISGV 399 (553)
Q Consensus 320 ~~~~~~~~~~~~l~~l~~~~~p~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~p~~~~~~~~~~~~~~~ 399 (553)
.|..+... ..+...++++.+.. + ...|++||++|..++.
T Consensus 300 -----------~L~~lp~~----~~~~~~~~~~~l~~--~-----------~~~~~iNg~~~~~~~p------------- 338 (448)
T 3aw5_A 300 -----------ALSDPPPE----PPKPTRTRRFALSL--S-----------GMQWTINGMFWNASNP------------- 338 (448)
T ss_dssp -----------CCSCCCCC----CCCCSEEEEEEEEE--E-----------TTEEEETTBCCCTTCT-------------
T ss_pred -----------ccCCCCCC----CCCCCceEEEEEeC--C-----------CceeeECCCcCCCCCC-------------
Confidence 11111110 12233445454432 1 1249999988743210
Q ss_pred ccCCCCCCCCeeeccCCCCCCccccCCCeeEEE-ecCCCEEEEEEEcCCCCCCCCCCeeecCCceEEEeeCCCCCCCCCC
Q 008799 400 FTDDFPAKPPIAFNYTGNYTGTLQTTNGTRLYR-LAYNSTVQLVLQGTTVIAPENHPTHLHGFNFFAVGKGSGNFDPNKD 478 (553)
Q Consensus 400 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~v~~~i~n~~~~~~~~HP~HlHG~~f~Vl~~g~g~~~~~~~ 478 (553)
.+. ++.|++|+|+|+|.+ ..+.||||||||+|||++++ |.+.....
T Consensus 339 ------------------------------~~~~~~~g~~v~~~i~N~~--~~~~HP~HLHG~~F~Vl~~~-G~~~~~~~ 385 (448)
T 3aw5_A 339 ------------------------------LFEHVSVEGVELWEIVNDK--ASMPHPMHLHGFPMWIIERK-DSPRQVAE 385 (448)
T ss_dssp ------------------------------TCCCEEECEEEEEEEEECS--SSCCEEEEESSSCBEEEEEE-SCCHHHHT
T ss_pred ------------------------------ceeccCCCCeEEEEEEcCC--CCCCcCEEECCceEEEEEec-CCCccccc
Confidence 023 568999999999964 25789999999999999985 43321101
Q ss_pred CCC----CCCCCCCcceeeEecCCcEEEEE--EE---ecCceeeEEeecchhhHhccceEEEEEe
Q 008799 479 PQK----FNLVDPVERNTISVPTAGWTAIR--FR---ADNPGVWFLHCHLEVHTSWGLKMAFVVD 534 (553)
Q Consensus 479 ~~~----~~~~~p~~rDTv~vp~~g~~~ir--f~---adnpG~w~~HCHil~H~d~GM~~~~~V~ 534 (553)
... .+..++.|||||.|+++++++|+ |+ +||| |+|||||++|+|.|||++|+|.
T Consensus 386 ~~~~~~~~~p~~~~~rDTv~v~pg~~~~i~vrF~~~~adnp--w~~HCHil~H~d~GMm~~~~V~ 448 (448)
T 3aw5_A 386 LAVDNRGRLPTDLGLKDTVLIWPGETVKIVVNFDAKKRGQL--FPFHCHNLEHEDGGMMINIAVK 448 (448)
T ss_dssp TCCSTTCCCGGGGSCBSEEEECTTCEEEEEEEECGGGTTCE--EEEEESSHHHHHTTCEEEEEEC
T ss_pred ccccccCCCccccCCccEEEeCCCCEEEEEEEecccCCCCc--EEEEcCChHHHhCCCceEEEeC
Confidence 111 23345679999999999998655 99 8999 9999999999999999999884
No 16
>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ...
Probab=100.00 E-value=1.4e-77 Score=633.16 Aligned_cols=421 Identities=19% Similarity=0.243 Sum_probs=304.4
Q ss_pred ceEEEEEEEEEEEeecccceeeEEEECCCCCCCeEeecCCCEEEEEEEeCCCCCceeeeCCCcccCCCCCCCCCCccCCC
Q 008799 22 AVRHYNFTVVMTNMTKLCASKSIVTVNGKFPGPTLHAREDDNVIVRVTNHVKYNVTIHWHGVRQLRTGWYDGPAYITQCP 101 (553)
Q Consensus 22 ~~~~~~l~~~~~~~~~~g~~~~~~~~NG~~pGP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~~ 101 (553)
..++|+|++++..++++|..+++|+|||++|||+||+++||+|+|+|+|+|+++|+|||||+++.+. +||+| ||+
T Consensus 16 ~~~~~~l~~~~~~~~~~G~~~~~~~~NG~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~~--~DG~p---~~~ 90 (488)
T 3od3_A 16 ARNRIQLTIGAGQSTFGGKTATTWGYNGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHWHGLEVPGE--VDGGP---QGI 90 (488)
T ss_dssp TTSEEEEEEEEEEEEETTEEEEEEEESSSSBCCEEEEETTCEEEEEEEECSSSCBCCEEETCCCCHH--HHCCT---TCC
T ss_pred CCeeEEEEEEEEEEccCCeEEEEEEECCcCCCCeEEEeCCeEEEEEEEeCCcCceeEeecccccCcc--cCCCC---cCc
Confidence 4578999999999999999999999999999999999999999999999999999999999999764 99987 899
Q ss_pred CCCCCceEEEEEeCCCCcceEEecChhh----hh-ccceeeEEEcCCCCCCCCCCC--CCcceEEEEeeeeccCHHHHHH
Q 008799 102 IQPGQSYVYNFTLTGQRGTLLWHAHISW----LR-ATVHGAIVILPKRSVPYPFPK--ADKEKIIVFGEWWKADVEAVIN 174 (553)
Q Consensus 102 i~pG~~~~y~~~~~~~~Gt~wYH~H~~~----~~-~Gl~G~liV~~~~~~~~~~~~--~~~e~~l~~~d~~~~~~~~~~~ 174 (553)
|.||++++|+|++.+++||||||||.++ |. +||+|+|||+++.+...+++. ..+|++|+++||+++...++..
T Consensus 91 i~PG~~~~Y~f~~~~~aGT~wYH~H~~~~t~~q~~~GL~G~liV~~~~~~~~~lp~~y~~~d~~lvl~D~~~~~~g~~~~ 170 (488)
T 3od3_A 91 IPPGGKRSVTLNVDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIEDDEILKLMLPKQWGIDDVPVIVQDKKFSADGQIDY 170 (488)
T ss_dssp BCTTCEEEEEEECCSCSEEEEEECCCTTTHHHHHHTTCCEEEEEECHHHHTTCCCCCBTTTEEEEEEEEECBCTTSSBCC
T ss_pred CcCCCeEEEEEecCCCceeEEEEecCCCcchhhhhccceeEEEEcCccccccCCcccCCccceeEEEEEeeecCCCceec
Confidence 9999999999999656899999999854 44 899999999998754444433 3469999999998864332110
Q ss_pred H-HHhCCCCCCCCceEEECCcCCCCCCCCCCCeEEEEEcCCEEEEEEEecCCCceEEEEE-cCceEEEEeeCCCcc-cce
Q 008799 175 Q-ATQMGVAPNVSDAHTINGHPGPVTNCTSQGFTLHVESGKTYLLRIVNAAVNDELFFKI-AGHNLTVVEVDSSYT-KPF 251 (553)
Q Consensus 175 ~-~~~~g~~~~~~~~~~iNG~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i-~gh~~~via~DG~~~-~p~ 251 (553)
. .......+..++.++|||+.+ |.+.+ +|++|||||||+|+.+.+.|+| +||+|+|||+||+++ +|+
T Consensus 171 ~~~~~~~~~g~~gd~~lvNG~~~---------p~~~v-~g~~~RlRliNas~~~~~~l~i~dg~~~~vIa~DG~~l~~P~ 240 (488)
T 3od3_A 171 QLDVMTAAVGWFGDTLLTNGAIY---------PQHAA-PRGWLRLRLLNGCNARSLNFATSDNRPLYVIASDGGLLPEPV 240 (488)
T ss_dssp CCSHHHHHHCCCCSEEEETTBSS---------CEEEE-EEEEEEEEEEECCSSCCEEEEETTCCCEEEEEETTEEEEEEE
T ss_pred cccccccccCCCCCEEEEcCCcC---------ccEec-CCCEEEEEEEccCCCceeeeeecCCCeEEEEEeCCCcccCcc
Confidence 0 000000123568999999987 66776 5679999999999999999999 699999999999986 899
Q ss_pred EeeEEEeCCCccEEEEEEeCCCCCeeEEEEeecccccc---ccCCccEEEEEEEcCCCCCCCCccCCCCCCCCccccccc
Q 008799 252 KTDTIFIGPGQTTNALLTADKKIGKYLITISPFMDTIV---AVNNVTGIAFLRYKGTVAFSSTTLTNVPAINATEVTNTF 328 (553)
Q Consensus 252 ~~d~~~l~pgeR~dv~v~~~~~~g~~~i~~~~~~~~~~---~~~~~~~~ail~y~~~~~~~~~~~~~~p~~~~~~~~~~~ 328 (553)
.+++|.|+|||||||+|++++ .+.|.+++........ .++. ...+++......... ..+|.
T Consensus 241 ~~~~l~l~pGeR~dvlv~~~~-~~~~~l~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~~~~---~~~P~---------- 304 (488)
T 3od3_A 241 KVSELPVLMGERFEVLVEVND-NKPFDLVTLPVSQMGMAIAPFDK--PHPVMRIQPIAISAS---GALPD---------- 304 (488)
T ss_dssp EESCEEECTTCEEEEEEEECT-TCCEEEEECCCSSTTTTSTTTTS--CEEEEEEEEEEEECC---CCCCS----------
T ss_pred EeceEEECCCCEEEEEEEeCC-CceEEEEEeccCCCCcccccccC--ccceeEecccccCCC---CCCCc----------
Confidence 999999999999999999997 5789998764321100 1111 112222221100000 00110
Q ss_pred ccccccccCCCCCCCCCCCcceEEEEEeeee--------------ccCCccC-----------------CCCcee----e
Q 008799 329 SDNLRSLNSKRYPAKVPLTVDHSLLLTMAVA--------------VNPCATC-----------------PNGTKV----G 373 (553)
Q Consensus 329 ~~~l~~l~~~~~p~~~p~~~d~~~~~~~~~~--------------~~~~~~~-----------------~~~~~~----~ 373 (553)
.|..+. ..+ .++...++++.+.+... ...-.+. ..|..+ .
T Consensus 305 --~L~~~~--~~~-~~~~~~~r~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~ 379 (488)
T 3od3_A 305 --TLSSLP--ALP-SLEGLTVRKLQLSMDPMLDMMGMQMLMEKYGDQAMAGMDHSQMMGHMGHGNMNHMNHGGKFDFHHA 379 (488)
T ss_dssp --CCCCCC--CCC-CCTTCCEEEEEEEECHHHHHHHHHHHHHHHGGGGGTTSCHHHHCCCSCCCCCCCSCCCGGGCGGGC
T ss_pred --ccccCC--CCc-ccccccceEEEEEecccccccccccccccccccccccccccccccccccCccccccccccccccce
Confidence 011110 001 11122345555543210 0000000 000011 2
Q ss_pred EeeeceeeecCCchhhhhhhccccccccCCCCCCCCeeeccCCCCCCccccCCCeeEEEecCCCEEEEEEEcCCCCCCCC
Q 008799 374 AAMNNISFVMPTTALLQAHYYKISGVFTDDFPAKPPIAFNYTGNYTGTLQTTNGTRLYRLAYNSTVQLVLQGTTVIAPEN 453 (553)
Q Consensus 374 ~~~n~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~i~n~~~~~~~~ 453 (553)
|.|||++|... ...+.++.|++|+|.|.|.+ +.+.
T Consensus 380 ~~ING~~~~~~-------------------------------------------~~~~~~~~G~~e~w~l~N~~--~~~~ 414 (488)
T 3od3_A 380 NKINGQAFDMN-------------------------------------------KPMFAAAKGQYERWVISGVG--DMML 414 (488)
T ss_dssp EEETTBCCCTT-------------------------------------------CCSEECCBSSCEEEEEECTT--CCCC
T ss_pred eeECCeeCCCC-------------------------------------------CCceEcCCCCEEEEEEEeCC--CCCC
Confidence 56776655211 12257789999999999965 2578
Q ss_pred CCeeecCCceEEEeeCCCCCCCCCCCCCCCCCCCCcceeeEecCCcEEEEEEEec----CceeeEEeecchhhHhccceE
Q 008799 454 HPTHLHGFNFFAVGKGSGNFDPNKDPQKFNLVDPVERNTISVPTAGWTAIRFRAD----NPGVWFLHCHLEVHTSWGLKM 529 (553)
Q Consensus 454 HP~HlHG~~f~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~ad----npG~w~~HCHil~H~d~GM~~ 529 (553)
|||||||++|+|++++... ....++.|||||.|+ ++++.|+|+++ +||.|||||||++|||.|||.
T Consensus 415 Hp~HlHg~~F~Vl~~~g~~---------~~~~~~~~kDTV~v~-g~~~~i~~~f~~~~~~~G~~m~HCH~l~Hed~GMm~ 484 (488)
T 3od3_A 415 HPFHIHGTQFRILSENGKP---------PAAHRAGWKDTVKVE-GNVSEVLVKFNHDAPKEHAYMAHCHLLEHEDTGMML 484 (488)
T ss_dssp EEEEETTCCBEEEEBTTBC---------CCGGGSSSBSEEEES-SSEEEEEECBCSCCCGGGCEEEEESSHHHHHTTCEE
T ss_pred ccEEEcCceEEEeccCCCc---------cccccCCceeEEEeC-CCEEEEEEEeccCCCCCCCEEEeCCchHHHhcCCcE
Confidence 9999999999999985321 122356799999999 99999999974 578999999999999999999
Q ss_pred EEEE
Q 008799 530 AFVV 533 (553)
Q Consensus 530 ~~~V 533 (553)
.|+|
T Consensus 485 ~f~V 488 (488)
T 3od3_A 485 GFTV 488 (488)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 9976
No 17
>2g23_A PHS, phenoxazinone synthase; copper, metalloprotein, laccase, multicopper oxidase, hexamer; 2.30A {Streptomyces antibioticus} PDB: 3gyr_A
Probab=100.00 E-value=1.4e-75 Score=633.02 Aligned_cols=459 Identities=19% Similarity=0.234 Sum_probs=313.8
Q ss_pred cceEEEEEEEEEEEeecc--cceeeEEEECCCCCCCeEeecCCCEEEEEEEeCCCCC-----------------------
Q 008799 21 SAVRHYNFTVVMTNMTKL--CASKSIVTVNGKFPGPTLHAREDDNVIVRVTNHVKYN----------------------- 75 (553)
Q Consensus 21 ~~~~~~~l~~~~~~~~~~--g~~~~~~~~NG~~pGP~i~v~~Gd~v~v~l~N~l~~~----------------------- 75 (553)
...++|+|++++...++. +..+++|+|||++|||+|++++||+|+|+++|+|++.
T Consensus 30 ~~~~~~~l~~~~~~~~l~~~~~~t~~~~ynG~~PGPtI~~~~Gd~v~V~~~N~L~~~~~~~~~~~~~p~~~~g~p~~~~~ 109 (612)
T 2g23_A 30 EVTRETEIALRPTWVRLHPQLPPTLMWGYDGQVPGPTIEVRRGQRVRIAWTNRIPKGSEYPVTSVEVPLGPPGTPAPNTE 109 (612)
T ss_dssp CTTBCEEEEEEEEEECSCTTSCCEEEEEETTBSSCCEEEEETTCCEEEEEEECCCTTCCCSEEEEEECCCSTTSCCGGGS
T ss_pred CCeEEEEEEEEEEEEEECCCCcceEEEEECCccCCceEEEECCeEeeEEEEECcCCcccccccccccccccCCCcccccc
Confidence 346889999999988753 4589999999999999999999999999999999753
Q ss_pred ------------------ceeeeCCCcccCCCCCCCCCCccCCCCCCCCceEEEEEeCCCCcceEEecChhh----hh-c
Q 008799 76 ------------------VTIHWHGVRQLRTGWYDGPAYITQCPIQPGQSYVYNFTLTGQRGTLLWHAHISW----LR-A 132 (553)
Q Consensus 76 ------------------~~iH~HG~~~~~~~~~DGv~~~tq~~i~pG~~~~y~~~~~~~~Gt~wYH~H~~~----~~-~ 132 (553)
|+|||||+++.+. +||++ ||+|.||++++|+|++.+++||||||||.++ |. +
T Consensus 110 p~~~g~~~~~~~~~~~~~tsiH~HG~~~~~~--~DG~p---~~~i~PG~s~~Y~f~~~~~aGT~wYH~H~~~~t~~q~~~ 184 (612)
T 2g23_A 110 PGRGGVEPNKDVAALPAWSVTHLHGAQTGGG--NDGWA---DNAVGFGDAQLSEYPNDHQATQWWYHDHAMNITRWNVMA 184 (612)
T ss_dssp CSCTTCCCCHHHHTCCCCBCEEEETCCCCTT--TSCCG---GGCBCTTCEEEEEECCCSCSCEEEEEECCTTTHHHHTTT
T ss_pred cccccccccccccccCCceEEEcCCCCCCCc--cCCCC---cCCCCCCCeEEEEEEecCCCceEEEecccCCcchhhhhc
Confidence 8999999999876 89986 8999999999999998668999999999976 44 8
Q ss_pred cceeeEEEcCCCCCCCCCCCCCcceEEEEeeeeccCHHH-HHH-HH------Hh----CCC----CCCCCceEEECCcCC
Q 008799 133 TVHGAIVILPKRSVPYPFPKADKEKIIVFGEWWKADVEA-VIN-QA------TQ----MGV----APNVSDAHTINGHPG 196 (553)
Q Consensus 133 Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~-~~~-~~------~~----~g~----~~~~~~~~~iNG~~~ 196 (553)
||+|+|||+++.+..++++.+++|++|+++||+++.... .+. +. .. .++ .+..++.++|||+.+
T Consensus 185 GL~G~liV~~~~~~~~~lp~~d~d~~l~l~Dw~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~p~~~~~~gd~~lVNG~~~ 264 (612)
T 2g23_A 185 GLYGTYLVRDDEEDALGLPSGDREIPLLIADRNLDTDEDGRLNGRLLHKTVIVQQSNPETGKPVSIPFFGPYTTVNGRIW 264 (612)
T ss_dssp TCEEEEEEECHHHHTTTCCCGGGEEEEEEEEECEEECTTSCEEEEEEEEEEEEESSCSSSSCCEECCCCCSEEEETTEES
T ss_pred cceeEEEEcCcccccccCCCCcceEEEEEEEEeccCCcccccccccccccccccccccccCcccccCCcCCEEEECCccC
Confidence 999999999987666666678999999999999864311 000 00 00 111 124679999999988
Q ss_pred CCCCCCCCCeEEEEEcCCEEEEEEEecCCCceEEEEEcCc-------eEEEEeeCCCcc-cceEee------EEEeCCCc
Q 008799 197 PVTNCTSQGFTLHVESGKTYLLRIVNAAVNDELFFKIAGH-------NLTVVEVDSSYT-KPFKTD------TIFIGPGQ 262 (553)
Q Consensus 197 ~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh-------~~~via~DG~~~-~p~~~d------~~~l~pge 262 (553)
|.++|++| +|||||||+|+.+.+.|+|++| +|+|||+||+++ +|+.++ +|.|+|||
T Consensus 265 ---------p~~~V~~g-~yRlRliNas~~r~~~l~i~~h~g~~~~~~~~vIa~DG~~l~~P~~~~~~~~~~~l~l~pge 334 (612)
T 2g23_A 265 ---------PYADVDDG-WYRLRLVNASNARIYNLVLIDEDDRPVPGVVHQIGSDGGLLPRPVPVDFDDTLPVLSAAPAE 334 (612)
T ss_dssp ---------CEEEEESS-EEEEEEEECCSSCCEEEEEECTTSCBCTTSEEEEEETTEEEEEEEEECSSSSSSSEEECTTC
T ss_pred ---------CeEEecCC-eEEEEEEecCCCeEEEEEEcCCCCccCCCcEEEEEeCCeEccCCEEecccCcccEEEECCcC
Confidence 88999999 9999999999999999999999 899999999999 699999 99999999
Q ss_pred cEEEEEEeCCCCC-eeEEEEeecccccccc---CCccEEEEEEEcCCCCCCCCccCCCCCCCCcccccccccccccccCC
Q 008799 263 TTNALLTADKKIG-KYLITISPFMDTIVAV---NNVTGIAFLRYKGTVAFSSTTLTNVPAINATEVTNTFSDNLRSLNSK 338 (553)
Q Consensus 263 R~dv~v~~~~~~g-~~~i~~~~~~~~~~~~---~~~~~~ail~y~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~ 338 (553)
||||+|++++.+| ++.|+........+.. +......++++......... ...+|. .|... .+
T Consensus 335 R~dvlVd~~~~~g~~~~L~~~~~~~~~g~~~~~~~~~~~~vm~f~V~~~~~~~-~~~~P~------------~L~~~-~~ 400 (612)
T 2g23_A 335 RFDLLVDFRALGGRRLRLVDKGPGAPAGTPDPLGGVRYPEVMEFRVRETCEED-SFALPE------------VLSGS-FR 400 (612)
T ss_dssp EEEEEEECTTCTTCEEEEEECCTTSCTTSCBGGGTBSCCEEEEEEEECCSCCC-CCCCCS------------SCCSS-CC
T ss_pred eEEEEEECCCCCCCEEEEEeCCccCCCCccccccCccccceEEEEEccCCCCC-CCCCCh------------hhccc-cc
Confidence 9999999998766 6888775321111000 00111234444432111000 001111 01000 00
Q ss_pred CCCCCCCCCcceEEEEEe---eeeccCCccCCCCceeeEeeeceeee----cCCchhhhhhhccccccccCCCCCCCCee
Q 008799 339 RYPAKVPLTVDHSLLLTM---AVAVNPCATCPNGTKVGAAMNNISFV----MPTTALLQAHYYKISGVFTDDFPAKPPIA 411 (553)
Q Consensus 339 ~~p~~~p~~~d~~~~~~~---~~~~~~~~~~~~~~~~~~~~n~~~~~----~p~~~~~~~~~~~~~~~~~~~~~~~~p~~ 411 (553)
..+..++. .+++.+.. .... .+....|.++..... .|....+.. ....| ....
T Consensus 401 ~l~~~~~~--~~r~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~g---------~~~~ 460 (612)
T 2g23_A 401 RMSHDIPH--GHRLIVLTPPGTKGS-------GGHPEIWEMAEVEDPADVQVPAEGVIQV--TGADG---------RTKT 460 (612)
T ss_dssp CCCTTSCC--EEEEEEECCTTCTTS-------TTCCCEEEEEEEC-----CCSCTTEEEE--ECTTS---------CEEE
T ss_pred cCCccccc--ceeEEeecccccccc-------ccccceeeccccccccccccccccceee--eccCC---------ceeE
Confidence 00000110 11111110 0000 000112333221000 000000000 00000 0000
Q ss_pred eccCCCCCCccccCCCeeEEEecCCCEEEEEEEcCCCCCCCCCCeeecCCceEEEeeCCCC---CCCCCC----------
Q 008799 412 FNYTGNYTGTLQTTNGTRLYRLAYNSTVQLVLQGTTVIAPENHPTHLHGFNFFAVGKGSGN---FDPNKD---------- 478 (553)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~i~n~~~~~~~~HP~HlHG~~f~Vl~~g~g~---~~~~~~---------- 478 (553)
| .+|+..+.....+.++.|++|+|+|.|.+ .+.|||||||+.|+|++++.+. |+....
T Consensus 461 ~------~iNG~~~~~~~~~~v~~G~~v~w~l~N~~---~~~HPiHlHg~~F~Vl~r~~~~~~~~~~~~~g~~~~~~~~~ 531 (612)
T 2g23_A 461 Y------RRTAATFNDGLGFTIGEGTHEQWTFLNLS---PILHPMHIHLADFQVLGRDAYDASGFDLALGGTRTPVRLDP 531 (612)
T ss_dssp E------EEEECSTTSCCCEEEETTCEEEEEEEECS---SSCEEEEESSCCEEEEEEEEEECTTEETTTTEESSCEEEEE
T ss_pred E------EECCccCCCCCceEecCCCEEEEEEEeCC---CCCCCeEEcCceEEEecccCcccccccccccCccccccccc
Confidence 0 11222222334578899999999999965 6789999999999999985322 211100
Q ss_pred --CCCCCCCCCCcceeeEecCCcEEEEEEEec-CceeeEEeecchhhHhccceEEEEEeCCC
Q 008799 479 --PQKFNLVDPVERNTISVPTAGWTAIRFRAD-NPGVWFLHCHLEVHTSWGLKMAFVVDNGK 537 (553)
Q Consensus 479 --~~~~~~~~p~~rDTv~vp~~g~~~irf~ad-npG~w~~HCHil~H~d~GM~~~~~V~~~~ 537 (553)
....+..++.|||||.|+|+++++|+|+++ |||.|||||||++|+|.|||..|+|.+.+
T Consensus 532 g~~~~~~~~e~~~kDTv~v~Pg~~~~i~~~~~~~pG~w~~HCHil~Hed~GMm~~f~V~p~~ 593 (612)
T 2g23_A 532 DTPVPLAPNELGHKDVFQVPGPQGLRVMGKFDGAYGRFMYHCHLLEHEDMGMMRPFVVMPPE 593 (612)
T ss_dssp EEECCCCTTSSSCBSEEEECSSEEEEEEEECCSCCEEEEEEESSHHHHTTTCEEEEEEECHH
T ss_pred ccccCCCcccccccCeEEECCCcEEEEEEEeCCCCccEEEEeCchhHhhcCCceEEEECchh
Confidence 023455667899999999999999999999 99999999999999999999999998643
No 18
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea}
Probab=100.00 E-value=1.1e-53 Score=430.74 Aligned_cols=271 Identities=27% Similarity=0.424 Sum_probs=226.4
Q ss_pred ceEEEEEEEEEEEeecc-cceeeEEEECCCCCCCeEeecCCCEEEEEEEeCCCCCceeeeCCCcccCCCCCCCCCCccCC
Q 008799 22 AVRHYNFTVVMTNMTKL-CASKSIVTVNGKFPGPTLHAREDDNVIVRVTNHVKYNVTIHWHGVRQLRTGWYDGPAYITQC 100 (553)
Q Consensus 22 ~~~~~~l~~~~~~~~~~-g~~~~~~~~NG~~pGP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~ 100 (553)
++|+|+|++++..+++. |..+.+|+|||++|||+|++++||+|+|+|+|.++.+++|||||+++.+..++||+|+++||
T Consensus 1 ~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~~siH~HG~~~~~~~~~DG~p~~t~~ 80 (318)
T 3g5w_A 1 EKREFDLSIEDTRIVLVGKRDFHTFAFNGQVPAPLIHVMEGDDVTVNVTNMTTLPHTIHWHGMLQRGTWQSDGVPHATQH 80 (318)
T ss_dssp CEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEECSSSCBCCEEETCCCTTCGGGSCCBTTTBC
T ss_pred CeEEEEEEEEEEEEEcCCCcEEEEEEECCccCCceEEEeCCCEEEEEEEeCCCCceeEEecCcCCCCCcccCCCcccccc
Confidence 47999999999999884 78899999999999999999999999999999999999999999999887789999999999
Q ss_pred CCCCCCceEEEEEeCCCCcceEEecChhhhh----ccceeeEEEcCCCCCCCCCCCCCcceEEEEeeeeccCHHHHHHHH
Q 008799 101 PIQPGQSYVYNFTLTGQRGTLLWHAHISWLR----ATVHGAIVILPKRSVPYPFPKADKEKIIVFGEWWKADVEAVINQA 176 (553)
Q Consensus 101 ~i~pG~~~~y~~~~~~~~Gt~wYH~H~~~~~----~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~~~~ 176 (553)
+|.||++++|+|++ +++||||||||.+.+. +||+|+|||++++..+.+. ..++|++|+++||+...... .
T Consensus 81 ~i~PG~~~~y~f~~-~~~Gt~wYH~H~~~~~~~~~~Gl~G~lIV~~~~~~~~~~-~~d~e~~l~l~dw~~~~~~~----~ 154 (318)
T 3g5w_A 81 AIEPGDTFTYKFKA-EPAGTMWYHCHVNVNEHVTMRGMWGPLIVEPKNPLPIEK-TVTKDYILMLSDWVSSWANK----P 154 (318)
T ss_dssp CBCTTCEEEEEEEC-CSCEEEEEECCSSHHHHHHHSCCEEEEEEECSSCCHHHH-TCCEEEEEEEEEECGGGTTC----T
T ss_pred cCCCCCEEEEEEEc-CCCEEEEEEccCChhhhhccCCCEEEEEEcCCCcccccc-cccceeEEEEEeeccccccc----c
Confidence 99999999999998 7999999999987653 7999999999876432111 35889999999998753211 0
Q ss_pred HhCCCCCCCCceEEECCcCCCCCCCCCCCeEEEEEcCCEEEEEEEecCCCceEEEEEcCceEEEEeeCCCcc-cceEeeE
Q 008799 177 TQMGVAPNVSDAHTINGHPGPVTNCTSQGFTLHVESGKTYLLRIVNAAVNDELFFKIAGHNLTVVEVDSSYT-KPFKTDT 255 (553)
Q Consensus 177 ~~~g~~~~~~~~~~iNG~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~-~p~~~d~ 255 (553)
...+.....++.++|||+.++.. ..+++++|++|||||+|++.. .+.||||||.|+|++.||.++ +|..+|+
T Consensus 155 ~~~~~~~~~~d~~~ING~~~~~~------~~l~v~~G~~vrlrliN~~~~-~h~~hlhGh~f~vi~~dG~~~~~p~~~dt 227 (318)
T 3g5w_A 155 GEGGIPGDVFDYYTINAKSFPET------QPIRVKKGDVIRLRLIGAGDH-VHAIHTHGHISQIAFKDGFPLDKPIKGDT 227 (318)
T ss_dssp TCCCCTTCCCCEEEETTBCBTSS------CCEEECTTCEEEEEEEECSSS-CEEEEETTSCEEEEEETTEEEEEEEEESE
T ss_pred ccCCCCCCcCcEEEEcCcCCCCC------ccEEeCCCCEEEEEEEeCCCc-eEEEEECCcEEEEEecCCcccCCCccccE
Confidence 11122223568999999986321 459999999999999999975 567999999999999999988 7999999
Q ss_pred EEeCCCccEEEEEEeCCCCCeeEEEEeeccccc-cccCCccEEEEEEEcCCC
Q 008799 256 IFIGPGQTTNALLTADKKIGKYLITISPFMDTI-VAVNNVTGIAFLRYKGTV 306 (553)
Q Consensus 256 ~~l~pgeR~dv~v~~~~~~g~~~i~~~~~~~~~-~~~~~~~~~ail~y~~~~ 306 (553)
+.|+||||+||++++++ ||.|.++||...... +........++++|.+..
T Consensus 228 v~l~pger~~v~~~a~~-pG~w~~hCH~~~H~~~g~~~~~Gm~~~i~~~g~~ 278 (318)
T 3g5w_A 228 VLIGPGERYDVILNMDN-PGLWMIHDHVDTHTTNGDKPDGGIMTTIEYEEVG 278 (318)
T ss_dssp EEECTTCEEEEEEECCS-CSEEEEEESSGGGSCBTTBSSCBSEEEEEETTTC
T ss_pred EEECCCCEEEEEEECCC-CeeEEEEeccHHHhhccCcCCCCCEEEEEECCCC
Confidence 99999999999999997 799999999643221 011123457889998754
No 19
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A*
Probab=100.00 E-value=6.6e-53 Score=486.19 Aligned_cols=270 Identities=20% Similarity=0.261 Sum_probs=206.7
Q ss_pred cccccccceEEEEEEEEEEEeecc--cc--------------------------eeeEE-------EECCC--------C
Q 008799 15 FPALVESAVRHYNFTVVMTNMTKL--CA--------------------------SKSIV-------TVNGK--------F 51 (553)
Q Consensus 15 ~~~~~~~~~~~~~l~~~~~~~~~~--g~--------------------------~~~~~-------~~NG~--------~ 51 (553)
++.++.+++|+|.+.|++..+... +. .++.+ +||+. +
T Consensus 13 ~~~~~~~~~r~y~i~~~~~~w~y~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~ 92 (1065)
T 2j5w_A 13 CSTPAWAKEKHYYIGIIETTWDYASDHGEKKLISVDTEHSNIYLQNGPDRIGRLYKKALYLQYTDETFRTTIEKPVWLGF 92 (1065)
T ss_dssp -------CEEEEEEEEEEEEEESCCCCCCCBBTTBCSSSTHHHHCCCSSCCCSEEEEEEEEEESSSSTTSBCCCCGGGTT
T ss_pred hccccccceeEEEEEEEEEEeecCCCCcCCCccccchhhhheecccCCcccCCeEeEEEEEEecceeecCCcccccccCC
Confidence 335567889999999999987653 22 22333 57877 9
Q ss_pred CCCeEeecCCCEEEEEEEeCCCCCceeeeCCCccc----CCCCCCCCCC--ccCCCCCCCCceEEEEEeCCC--------
Q 008799 52 PGPTLHAREDDNVIVRVTNHVKYNVTIHWHGVRQL----RTGWYDGPAY--ITQCPIQPGQSYVYNFTLTGQ-------- 117 (553)
Q Consensus 52 pGP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~----~~~~~DGv~~--~tq~~i~pG~~~~y~~~~~~~-------- 117 (553)
|||+||+++||+|+|+|+|.|+++++|||||++++ +.+|+||+++ +|||+|+||++|+|+|++.++
T Consensus 93 PGP~Ir~~~GD~v~v~v~N~l~~~tsiHwHGl~~~~~~DG~~~~dg~~g~~~t~~~I~PG~t~tY~f~~~~~~gp~~~d~ 172 (1065)
T 2j5w_A 93 LGPIIKAETGDKVYVHLKNLASRPYTFHSHGITYYKEHEGAIYPDNTTDFQRADDKVYPGEQYTYMLLATEEQSPGEGDG 172 (1065)
T ss_dssp SCCCEEEETTCEEEEEEEEESSSCBCCEESSSBCCGGGCCCCSCCCCCGGGTGGGCBCTTCEEEEEEECCSTTSCCTTSC
T ss_pred cCCeEEEeCCeEEEEEEEECCCCCeeEEeCCccCCcccCCcccCCCCCcccccccccCCCCEEEEEEEeccccCCccCCC
Confidence 99999999999999999999999999999999987 4577888888 899999999999999999544
Q ss_pred -CcceEEecChhhhh---ccceeeEEEcCCCCCCCCCC-CCCcceEEEEe------eeeccCHHHHHHHHHhCCCC----
Q 008799 118 -RGTLLWHAHISWLR---ATVHGAIVILPKRSVPYPFP-KADKEKIIVFG------EWWKADVEAVINQATQMGVA---- 182 (553)
Q Consensus 118 -~Gt~wYH~H~~~~~---~Gl~G~liV~~~~~~~~~~~-~~~~e~~l~~~------d~~~~~~~~~~~~~~~~g~~---- 182 (553)
+||||||||.+.++ +||+|+|||++++....|.+ ..|+|++|+++ ||+..+....+. ...+..
T Consensus 173 ~aGT~wYHsH~~~~~qv~~GL~G~lIV~~~~~~~~p~~~~~d~e~~l~l~d~d~~~~w~~~~~~~~~~--~~p~~~~~~~ 250 (1065)
T 2j5w_A 173 NCVTRIYHSHIDAPKDIASGLIGPLIICKKDSLDKEKEKHIDREFVVMFSVVDENFSWYLEDNIKTYC--SEPEKVDKDN 250 (1065)
T ss_dssp SEEEEEEECCSSHHHHHHHTCEEEEEEECTTCBSSSSBTTCCEEEEEEEEEEEGGGSTTHHHHHHHHC--SCGGGCCTTC
T ss_pred CceEEEEEeccCchhHhhCccEEEEEEecCcccCCCccCCCccceEEEeeeecCCccccccchhhhhh--cCcccccccc
Confidence 49999999999875 89999999999876443332 35889999999 455443221110 000000
Q ss_pred ---CCCCceEEECCcCCCCCCCCCCCeEEEEEcCCEEEEEEEecCCC-ceEEEEEcCceEEEEeeCCCcccceEeeEEEe
Q 008799 183 ---PNVSDAHTINGHPGPVTNCTSQGFTLHVESGKTYLLRIVNAAVN-DELFFKIAGHNLTVVEVDSSYTKPFKTDTIFI 258 (553)
Q Consensus 183 ---~~~~~~~~iNG~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~-~~~~~~i~gh~~~via~DG~~~~p~~~d~~~l 258 (553)
....+.++|||+.+.. .+.+++++|++|||||+|+|.. ..+.|||+||+|++ +|+.+|++.|
T Consensus 251 ~~~~~~~~~~~iNG~~~~~------~~~l~v~~Ge~vRlRliNag~~~~~~~~~i~Gh~f~v--------~p~~~dtv~I 316 (1065)
T 2j5w_A 251 EDFQQSNRMYSVNGYTFGS------LSGLSMCAEDRVKWYLFGMGNEVDVHAAFFHGQALTN--------KNYRIDTINL 316 (1065)
T ss_dssp HHHHHHTEEEEETTEETTC------CCCCEEETTCEEEEEEEECSSTTCCEEEEETTCCEEE--------TTEEESEEEE
T ss_pred ccccccCcEEEECCccCCC------CcceEECCCCEEEEEEEcCCcccceeEEEEcCCEEEE--------CCeeecEEEE
Confidence 0013579999997421 2679999999999999999976 58899999999993 6889999999
Q ss_pred CCCccEEEEEEeCCCCCeeEEEEeeccccccccCCccEEEEEEEcCCC
Q 008799 259 GPGQTTNALLTADKKIGKYLITISPFMDTIVAVNNVTGIAFLRYKGTV 306 (553)
Q Consensus 259 ~pgeR~dv~v~~~~~~g~~~i~~~~~~~~~~~~~~~~~~ail~y~~~~ 306 (553)
+||||+||+|++++ +|.|+++|+..... ..+..+.+.+.+..
T Consensus 317 ~pGer~dVlv~~~~-pG~y~i~~h~~~h~-----~~Gm~~~~~V~~~~ 358 (1065)
T 2j5w_A 317 FPATLFDAYMVAQN-PGEWMLSCQNLNHL-----KAGLQAFFQVQECN 358 (1065)
T ss_dssp CBTCEEEEEEECCS-CEEEEEEECSHHHH-----HTTCEEEEEEECSC
T ss_pred CCCcEEEEEEEeCC-CeeEEEEecCcchh-----hCCCEEEEEEecCC
Confidence 99999999999998 79999999964321 12346777777543
No 20
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A*
Probab=100.00 E-value=1.7e-54 Score=480.33 Aligned_cols=237 Identities=18% Similarity=0.232 Sum_probs=179.5
Q ss_pred EEEEEEEEeecc-cceeeEEEECCCCCCCeEeecCCCEEEEEEEeCCCCCceeeeCCCcccCCCCCCCCCC--------c
Q 008799 27 NFTVVMTNMTKL-CASKSIVTVNGKFPGPTLHAREDDNVIVRVTNHVKYNVTIHWHGVRQLRTGWYDGPAY--------I 97 (553)
Q Consensus 27 ~l~~~~~~~~~~-g~~~~~~~~NG~~pGP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~--------~ 97 (553)
.|+++++..... |..+..|+ ++|||+||+++||+|+|+|+|.|+++++|||||+++... +||+|+ +
T Consensus 50 ~l~~~~~~~~~~~~~~~~~~~---~~pGP~Ir~~~GD~v~V~v~N~l~~~tsIHwHGl~~~~~--~DG~p~~Dg~~~~~v 124 (742)
T 2r7e_A 50 TLFVEFTDHLFNIAKPRPPWM---GLLGPTIQAEVYDTVVITLKNMASHPVSLHAVGVSYWKA--SEGAEYDDQTSQREK 124 (742)
T ss_dssp CCCCCCSSSCCCCSSCSTTTT---TTSEEEEEECSEEEEECCEECCSSSCCCCCCSSSCCCSS--SSCCCSSCSCCSSSS
T ss_pred EEEEEecceEEECCccccccc---CCcCCeEEEECCCEEEEEEEECCCCCEeEEecCcccCcc--ccCCccCCCCccccc
Confidence 344444444443 44455443 899999999999999999999999999999999998753 666664 8
Q ss_pred cCCCCCCCCceEEEEEeCC---------CCcceEEecChhhh--h-ccceeeEEEcCCCCCCCCCCCCCcceEEEEee--
Q 008799 98 TQCPIQPGQSYVYNFTLTG---------QRGTLLWHAHISWL--R-ATVHGAIVILPKRSVPYPFPKADKEKIIVFGE-- 163 (553)
Q Consensus 98 tq~~i~pG~~~~y~~~~~~---------~~Gt~wYH~H~~~~--~-~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d-- 163 (553)
|||+|+||++|+|+|++.+ ++||||||||.+.+ . +||+|+|||+++.....+.....+|++|++++
T Consensus 125 tq~~I~PG~s~tY~f~v~~~~gP~~~d~~~GT~wYHsH~~~~~q~~~GL~G~lIV~~~~~~~~~~~~~~~e~~l~~~~~d 204 (742)
T 2r7e_A 125 EDDKVFPGGSHTYVWQVLKENGPMASDPLCLTYSYLSHVDLVKDLNSGLIGALLVCREGSLAKEKTQTLHKFILLFAVFD 204 (742)
T ss_dssp SSSSCCTTCEECCEEEECGGGSCCSSSCSSCCEEECCCSCSHHHHHHHCCEEEEECSSSCTTTTTTTCCCEECCCEECCC
T ss_pred ccCcCCCCCeEEEEEEeccccCCCcCCCCcEEEEEccCCChHHHhhCCcEEEEEEecCcccCcccCceeeEEEEEeeccc
Confidence 9999999999999999843 46999999999873 4 89999999999865432222224888888764
Q ss_pred ----eeccCHHHHHHHHHhCCCCCCCCceEEECCcCCCCCCCCCCCeEEEEEcCCEEEEEEEecCCCc-eEEEEEcCceE
Q 008799 164 ----WWKADVEAVINQATQMGVAPNVSDAHTINGHPGPVTNCTSQGFTLHVESGKTYLLRIVNAAVND-ELFFKIAGHNL 238 (553)
Q Consensus 164 ----~~~~~~~~~~~~~~~~g~~~~~~~~~~iNG~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~-~~~~~i~gh~~ 238 (553)
|+.......+... .........+.++|||+.... .+.+++++|++|||||+|+++.. .+.||||||+|
T Consensus 205 e~~~w~~~~~~~~~~~~-~~~~~~~~~~~~~ING~~~~~------~~~l~v~~Ge~vrlrliN~g~~~~~h~~hlhGh~f 277 (742)
T 2r7e_A 205 EGKSWHSETKNSLMQDR-DAASARAWPKMHTVNGYVNRS------LPGLIGCHRKSVYWHVIGMGTTPEVHSIFLEGHTF 277 (742)
T ss_dssp CSSSSCCCCCC--------CCSCCCCCCCCEETTBCTBC------CCCCEECSSSCEEEECCCCCSSSCCCCCCCTTCCC
T ss_pred CCccccccccccccccC-CCccccccCceEEECCccCCC------CcceEEcCCCEEEEEEEeCCCCCcceEEEECCCEE
Confidence 4444322111110 111111234678999997421 26799999999999999999875 67899999999
Q ss_pred EEEeeCCCcccceEeeEEEeCCCccEEEEEEeCCCCCeeEEEEeec
Q 008799 239 TVVEVDSSYTKPFKTDTIFIGPGQTTNALLTADKKIGKYLITISPF 284 (553)
Q Consensus 239 ~via~DG~~~~p~~~d~~~l~pgeR~dv~v~~~~~~g~~~i~~~~~ 284 (553)
+|++ ..+|++.|.|||+++|++++++ ||.|+++||..
T Consensus 278 ~Vvg--------~~~Dtv~v~Pg~~~~v~~~~~~-pG~w~~hCH~~ 314 (742)
T 2r7e_A 278 LVRN--------HRQASLEISPITFLTAQTLLMD-LGQFLLFCHIS 314 (742)
T ss_dssp EETT--------EECCSCCCCTTCCCEEEECCCS-CSEECCCCCSS
T ss_pred EEEe--------EecceEEeCCCcEEEEEEEeCC-CeeEEEEeCCh
Confidence 9974 3478999999999999999997 79999999964
No 21
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes}
Probab=100.00 E-value=3.2e-52 Score=424.71 Aligned_cols=271 Identities=28% Similarity=0.495 Sum_probs=225.3
Q ss_pred ceEEEEEEEEEEEeecc-cceeeEEEECCCCCCCeEeecCCCEEEEEEEeCCCCCceeeeCCCcccCCCCCCCCCCccCC
Q 008799 22 AVRHYNFTVVMTNMTKL-CASKSIVTVNGKFPGPTLHAREDDNVIVRVTNHVKYNVTIHWHGVRQLRTGWYDGPAYITQC 100 (553)
Q Consensus 22 ~~~~~~l~~~~~~~~~~-g~~~~~~~~NG~~pGP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~ 100 (553)
++++|+|++++..++++ |.++.+|+|||++|||+|+|++||+|+|+|+|.++.+++|||||+++.+.+|+||+|+++||
T Consensus 2 ~~~~~~l~~~~~~~~~~~g~~~~~~~~NG~~pGP~I~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGvp~vtq~ 81 (339)
T 2zwn_A 2 AEREFDMTIEEVTIKVAPGLDYKVFGFNGQVPGPLIHVQEGDDVIVNVTNNTSLPHTIHWHGVHQKGTWRSDGVPGVTQQ 81 (339)
T ss_dssp CEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEEESSSCBCCEEETCCCTTCGGGSCCBTTTBC
T ss_pred ceEEEEEEEEEEEEEcCCCcEEEEEEECCccCCCeEEEECCCEEEEEEEECCCCCccEEeCCCCcCCCcccCCCCccccC
Confidence 47899999999999985 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCceEEEEEeCCCCcceEEecChhh--h-h-ccceeeEEEcCCCCCCCCCCCCCcceEEEEeeeeccCHHHHHHHH
Q 008799 101 PIQPGQSYVYNFTLTGQRGTLLWHAHISW--L-R-ATVHGAIVILPKRSVPYPFPKADKEKIIVFGEWWKADVEAVINQA 176 (553)
Q Consensus 101 ~i~pG~~~~y~~~~~~~~Gt~wYH~H~~~--~-~-~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~~~~ 176 (553)
+|.||++++|+|++ +++||||||||... + . +||+|++||+++.....+ ...++|++++++||+.......
T Consensus 82 ~I~PG~~~~y~f~~-~~~Gt~wyH~H~~~~~q~~~~Gl~G~liV~p~~~~~~~-~~~d~e~~l~l~d~~~~~~~~~---- 155 (339)
T 2zwn_A 82 PIEAGDSYTYKFKA-DRIGTLWYHCHVNVNEHVGVRGMWGPLIVDPKQPLPIE-KRVTKDVIMMMSTWESAVADKY---- 155 (339)
T ss_dssp CBCTTCEEEEEEEC-CSCEEEEEECCSSHHHHTTTSCCEEEEEEECSSCCTTG-GGCSEEEEEEEEEECGGGTTCT----
T ss_pred ccCCCCeEEEEEEC-CCCEEEEEEecCCchhhhhcCCceEeEEecCCCccccc-ccCCceEEEEeeheeccccccc----
Confidence 99999999999998 68999999999876 3 3 799999999987643211 1357899999999986321100
Q ss_pred HhCCCCCCCCceEEECCcCCCCCCCCCCCeEEEEEcCCEEEEEEEecCCCceEEEEEcCceEEEEeeCCCccc-ceEeeE
Q 008799 177 TQMGVAPNVSDAHTINGHPGPVTNCTSQGFTLHVESGKTYLLRIVNAAVNDELFFKIAGHNLTVVEVDSSYTK-PFKTDT 255 (553)
Q Consensus 177 ~~~g~~~~~~~~~~iNG~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~~-p~~~d~ 255 (553)
...+.....++.++|||+.++.. ..+++++|++|||||+|+++. .+.||||||.|+|++.||.+++ |..+|+
T Consensus 156 ~~~g~~~~~~~~~~ING~~~~~~------~~~~v~~G~~vrlrliN~~~~-~h~~hlhGh~f~vi~~DG~~~~~p~~~dt 228 (339)
T 2zwn_A 156 GEGGTPMNVADYFSVNAKSFPLT------QPLRVKKGDVVKIRFFGAGGG-IHAMHSHGHDMLVTHKDGLPLDSPYYADT 228 (339)
T ss_dssp TCCCSTTSCCCEEEETTBCTTSS------CCEEECTTCEEEEEEEECSSS-CEEEEETTCCEEEEEETTEEEEEEEEESE
T ss_pred CCCCCCccccceEEEccccCCCc------ccEEECCCCEEEEEEEeCCCc-eEEEEECCcEEEEEEeCCeecCCCcEEEE
Confidence 00111222468999999976321 459999999999999999954 7789999999999999999984 899999
Q ss_pred EEeCCCccEEEEEEeCCCCCeeEEEEeeccccccc-cCCccEEEEEEEcCCC
Q 008799 256 IFIGPGQTTNALLTADKKIGKYLITISPFMDTIVA-VNNVTGIAFLRYKGTV 306 (553)
Q Consensus 256 ~~l~pgeR~dv~v~~~~~~g~~~i~~~~~~~~~~~-~~~~~~~ail~y~~~~ 306 (553)
+.|+||||+||+|++++ ||.|+++|+........ ....+..++++|.+..
T Consensus 229 v~l~pg~r~~v~~~~~~-pG~w~~hch~~~H~~~~~~~~~gm~a~l~~~g~~ 279 (339)
T 2zwn_A 229 VLVSPGERYDVIIEADN-PGRFIFHDHVDTHVTAGGKHPGGPITVIEYDGVP 279 (339)
T ss_dssp EEECTTCEEEEEEECCS-CSEEEEEECCGGGSCBTTBSSCSSEEEEEETTSC
T ss_pred EEECCCCEEEEEEEeCC-CeeEEEEEechhhcccccccCCCcEEEEEECCCC
Confidence 99999999999999997 79999999964421111 1223457899998754
No 22
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A*
Probab=100.00 E-value=3.6e-50 Score=397.79 Aligned_cols=133 Identities=22% Similarity=0.362 Sum_probs=111.2
Q ss_pred cccceEEEEEEEEEEEeecccceeeEEEECCCCCCCeEeecCCCEEEEEEEeCCCCCceeeeCCCcccCCCCCCCCCCcc
Q 008799 19 VESAVRHYNFTVVMTNMTKLCASKSIVTVNGKFPGPTLHAREDDNVIVRVTNHVKYNVTIHWHGVRQLRTGWYDGPAYIT 98 (553)
Q Consensus 19 ~~~~~~~~~l~~~~~~~~~~g~~~~~~~~NG~~pGP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~t 98 (553)
+.+.+|+|+|++++.. .+.....+++|||++|||+||+++||+|+|+|+|.++++++|||||+++... +||++ ++
T Consensus 3 ~~g~~~~~~l~~~~~~--~~~~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~~~~~~siH~HG~~~~~~--~DG~~-~t 77 (276)
T 3kw8_A 3 AGGEVRHLKMYAEKLA--DGQMGYGFEKGKASVPGPLIEVNEGDTLHIEFTNTMDVRASLHVHGLDYEIS--SDGTA-MN 77 (276)
T ss_dssp -CCCEEEEEEEEEECT--TSCEEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCCGG--GSCCT-TT
T ss_pred CcceEEEEEEEEEeCC--CCceecceeccCCcccCCeEEEECCCEEEEEEEECCCCCccEeecCcccCCc--cCCCc-CC
Confidence 4678999999999854 2333446678999999999999999999999999999999999999999764 99999 89
Q ss_pred CCCCCCCCceEEEEEeCC------------CCcceEEecChhh------hh-ccceeeEEEcCCCCCCCCCCCCCcceEE
Q 008799 99 QCPIQPGQSYVYNFTLTG------------QRGTLLWHAHISW------LR-ATVHGAIVILPKRSVPYPFPKADKEKII 159 (553)
Q Consensus 99 q~~i~pG~~~~y~~~~~~------------~~Gt~wYH~H~~~------~~-~Gl~G~liV~~~~~~~~~~~~~~~e~~l 159 (553)
||+|.||++++|+|++.+ ++||||||||.++ +. +||+|+|||+++.... .|+|++|
T Consensus 78 ~~~i~pG~~~~Y~f~~~~~~~~~~g~~~~~~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~~~~-----~drE~~l 152 (276)
T 3kw8_A 78 KSDVEPGGTRTYTWRTHKPGRRDDGTWRPGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGDVL-----PDATHTI 152 (276)
T ss_dssp TCSBCTTCEEEEEEECCCCEECTTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCCC-----CSEEEEE
T ss_pred cCCCCCCCEEEEEEEcCCccccccCccCCCCCEEEEEecCccccccchhhhhCccEEEEEEecCCCcc-----cccceEE
Confidence 999999999999999943 3799999999864 33 8999999999987531 2556555
Q ss_pred EE
Q 008799 160 VF 161 (553)
Q Consensus 160 ~~ 161 (553)
++
T Consensus 153 ~l 154 (276)
T 3kw8_A 153 VF 154 (276)
T ss_dssp EE
T ss_pred Ee
Confidence 44
No 23
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans}
Probab=100.00 E-value=3e-49 Score=419.40 Aligned_cols=390 Identities=17% Similarity=0.114 Sum_probs=255.6
Q ss_pred cceEEEEEEEEEEEeecccceeeEEEECCCCCCCeEeecCCCEEEEEEEeCCCCCceeeeCCCcccCCCCCCCCCCccCC
Q 008799 21 SAVRHYNFTVVMTNMTKLCASKSIVTVNGKFPGPTLHAREDDNVIVRVTNHVKYNVTIHWHGVRQLRTGWYDGPAYITQC 100 (553)
Q Consensus 21 ~~~~~~~l~~~~~~~~~~g~~~~~~~~NG~~pGP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~ 100 (553)
+.++++++++++..... ...+++|||++ ||+|+|++||+|+|+|+|.+...+++||||... .+||
T Consensus 26 ~~~~~~~~~~~~~~~~f---~g~~~~vNG~~-~p~i~v~~Gd~v~~~~~N~~~~~h~~~~~g~~~-----------~~~~ 90 (447)
T 2dv6_A 26 PVVFTLRTGIAEGRMVY---IGVGGDIDHKI-NPTLVVHEGETVQVNLVNGEGAQHDVVVDQYAA-----------RSAI 90 (447)
T ss_dssp CEEEEEEEEEETTEEEE---EEESGGGTTCB-SCCEEEETTCEEEEEEECSSSSCBCCEETTTTE-----------ECCC
T ss_pred CceEEEEEEecccEEEE---eccceeecCCc-CCeEEEcCCCEEEEEEEcCCCCceEEEEccCCc-----------ccce
Confidence 44555655655444443 34567899999 899999999999999999998889999998642 2579
Q ss_pred CCCCCCceEEEEEeCCCCcceEEecChhhhh-ccceeeEEEcCCCCCCCCC-----CCCCcce------------EEEEe
Q 008799 101 PIQPGQSYVYNFTLTGQRGTLLWHAHISWLR-ATVHGAIVILPKRSVPYPF-----PKADKEK------------IIVFG 162 (553)
Q Consensus 101 ~i~pG~~~~y~~~~~~~~Gt~wYH~H~~~~~-~Gl~G~liV~~~~~~~~~~-----~~~~~e~------------~l~~~ 162 (553)
+|.||++++|.|++ .++||||||||..+++ +||.|.|+|+++....+.. .....++ .+.+.
T Consensus 91 ~i~pG~~~~~~f~~-~~~Gt~~y~~~~~~h~~~Gm~G~i~V~~~~~~~~~~~~~~~~~~~~~~p~~~d~~~~~~~~~~l~ 169 (447)
T 2dv6_A 91 VNGKNASSTFSFVA-SKVGEFNYYCSIAGHRQAGMEGNIQVLPGNRAEMKSSGADITRDPADLPGPIGPRQAKTVRIDLE 169 (447)
T ss_dssp BCSTTBEEEEEEEC-CSCEEEEEECCSTTHHHHTCEEEEEEESSCCCCCCCSSBCCBCCTTCSCCCCCSCCCCEEEEEEE
T ss_pred ecCCCCeEEEEEEc-CCCEEEEEEeCCCChhhCCCEEEEEEeCCccccCCCcchhhccChhhcCCccccCCCcEEEEEEE
Confidence 99999999999998 6799999999998777 8999999999876432210 0000011 11111
Q ss_pred eeeccCHHHHHHHHHhCCCCCCCCceEEECCcC-CCCCCCCCCCeEEEEEcCCEEEEEEEecCC-CceEEEEEcCceEEE
Q 008799 163 EWWKADVEAVINQATQMGVAPNVSDAHTINGHP-GPVTNCTSQGFTLHVESGKTYLLRIVNAAV-NDELFFKIAGHNLTV 240 (553)
Q Consensus 163 d~~~~~~~~~~~~~~~~g~~~~~~~~~~iNG~~-~~~~~~~~~~~~~~v~~G~~~rlRliN~~~-~~~~~~~i~gh~~~v 240 (553)
...... ....| ...+.+++||+. + |+|++++|++||||++|.+. ...+.+|+||.
T Consensus 170 ~~~~~~-------~~~~g---~~~~~~~~NG~~pg---------p~i~v~~G~~v~~rl~N~~~~~~~~~ih~Hg~---- 226 (447)
T 2dv6_A 170 TVEVKG-------QLDDN---TTYTYWTFNGKVPG---------PFLRVRVGDTVELHLKNHKDSLMVHSVDFHGA---- 226 (447)
T ss_dssp EEEEEE-------EEETT---EEEEEEEETTBBSC---------CCEEEETTCEEEEEEEECTTCSSCBCCEETTC----
T ss_pred EEEEEE-------eccCC---ceeEEEEECCccCC---------CeEEecCCCEEEEEEEeCCCCceeEEEeeccc----
Confidence 000000 00011 123679999985 4 88999999999999999985 34667888884
Q ss_pred EeeCCCcccceEeeEEEeCCCccEEEEEEeCCCCCeeEEEEeeccccccccCCccEEEEEEEcCCCCCCCCccCCCCCCC
Q 008799 241 VEVDSSYTKPFKTDTIFIGPGQTTNALLTADKKIGKYLITISPFMDTIVAVNNVTGIAFLRYKGTVAFSSTTLTNVPAIN 320 (553)
Q Consensus 241 ia~DG~~~~p~~~d~~~l~pgeR~dv~v~~~~~~g~~~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~p~~~ 320 (553)
++.||. | +++.|.||||+++++++++ +|+||++|+...... .. ..+..+.+.+.+... +|...
T Consensus 227 ~~~DG~---~---~~~~i~pG~~~~~~~~~~~-~G~~~yh~h~~~~~~-~~-~~Gl~g~l~v~~~~~--------~P~~d 289 (447)
T 2dv6_A 227 TGPGGA---A---AFTQTDPGEETVVTFKALI-PGIYVYHCATPSVPT-HI-TNGMYGLLLVEPEGG--------LPQVD 289 (447)
T ss_dssp CSGGGG---G---GGCCBCTTCEEEEEEECCS-CEEEEEECCSSSHHH-HH-HTTCEEEEEEECTTC--------SCCCS
T ss_pred cCCCCC---C---ccEEeCCCCEEEEEEECCC-CeEEEEEeCCCChHH-HH-hCCCEEEEEEeCCCC--------CCCCC
Confidence 367887 3 2345999999999999987 699999998521110 01 112355666654311 11111
Q ss_pred CcccccccccccccccCCCCCCCCCCCcceEEEEEeeeeccCCccCCCCceeeEeeeceeeecCCchhhhhhhccccccc
Q 008799 321 ATEVTNTFSDNLRSLNSKRYPAKVPLTVDHSLLLTMAVAVNPCATCPNGTKVGAAMNNISFVMPTTALLQAHYYKISGVF 400 (553)
Q Consensus 321 ~~~~~~~~~~~l~~l~~~~~p~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~p~~~~~~~~~~~~~~~~ 400 (553)
.. ... .+.+..... .. ...... .+..... .......|.+||+.|..
T Consensus 290 ~~-~~~----~~~~~~~~~---~~--~~~g~~--~~~~~~~-----~~~~~~~~~iNG~~~~~----------------- 335 (447)
T 2dv6_A 290 RE-FYV----MQGEIYTVK---SF--GTSGEQ--EMDYEKL-----INEKPEYFLFNGSVGSL----------------- 335 (447)
T ss_dssp EE-EEE----EEEEECBSS---CT--TCCEEC--CBBHHHH-----HTTCCSEEEETTSTTCC-----------------
T ss_pred ee-EEE----EecccccCC---cc--cccccc--cCChHHh-----hccCCCEEEECCcccCC-----------------
Confidence 00 000 000000000 00 000000 0000000 00001124455432210
Q ss_pred cCCCCCCCCeeeccCCCCCCccccCCCeeEEEecCCCEEEEEEEcCCCCCCCCCCeeecCCceEEEeeCCCCCCCCCCCC
Q 008799 401 TDDFPAKPPIAFNYTGNYTGTLQTTNGTRLYRLAYNSTVQLVLQGTTVIAPENHPTHLHGFNFFAVGKGSGNFDPNKDPQ 480 (553)
Q Consensus 401 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~i~n~~~~~~~~HP~HlHG~~f~Vl~~g~g~~~~~~~~~ 480 (553)
.....+.++.|++++|+|.|.+ ....||||||||+|+||+.+.+ +
T Consensus 336 -------------------------~~~~~~~v~~g~~vrlrliN~~--~~~~h~~hlhGh~f~vv~~dG~-~------- 380 (447)
T 2dv6_A 336 -------------------------TRSHPLYASVGETVRIFFGVGG--PNFTSSFHVIGEIFDHVYSLGS-V------- 380 (447)
T ss_dssp -------------------------CCCCCEEECTTCEEEEEEEEEE--SSCCEEEEEETCCEEEECGGGC-S-------
T ss_pred -------------------------CCCcceEECCCCEEEEEEEeCC--CCceEeEEEcCcEEEEEEcCCc-c-------
Confidence 0013468889999999999965 2468999999999999998532 1
Q ss_pred CCCCCCCC-cceeeEecCCcEEEEEEEecCceeeEEeecchhhHhccceEEEEEeCCCC
Q 008799 481 KFNLVDPV-ERNTISVPTAGWTAIRFRADNPGVWFLHCHLEVHTSWGLKMAFVVDNGKG 538 (553)
Q Consensus 481 ~~~~~~p~-~rDTv~vp~~g~~~irf~adnpG~w~~HCHil~H~d~GM~~~~~V~~~~~ 538 (553)
+..|. +|||+.|++++++.|+|++++||.|+||||+++|++.||+++|.|+....
T Consensus 381 ---~~~p~~~~dtv~l~pg~r~~i~~~~~~pG~~~~hch~~~h~~~Gm~~~~~v~~~~~ 436 (447)
T 2dv6_A 381 ---VSPPLIGVQTVSVPPGGATIVDFKIDRAGRYILVDHALSRLEHGLVGFLNVDGPKN 436 (447)
T ss_dssp ---SSCCEEEESEEEECTTEEEEEEEECCSCEEEEEEESSGGGGGGTCCEEEEECSCSC
T ss_pred ---cCCCcccccEEEECCCcEEEEEEECCCCEEEEEEecCcCccccCCEEEEEEeCCCC
Confidence 12344 79999999999999999999999999999999999999999999987654
No 24
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A*
Probab=100.00 E-value=3.7e-49 Score=397.37 Aligned_cols=185 Identities=21% Similarity=0.345 Sum_probs=152.7
Q ss_pred cccccceEEEEEEEEEEEeeccc-ceeeEEEECCCCCCCeEeecCCCEEEEEEEeCCCCCceeeeCCCcccCCCCCCCCC
Q 008799 17 ALVESAVRHYNFTVVMTNMTKLC-ASKSIVTVNGKFPGPTLHAREDDNVIVRVTNHVKYNVTIHWHGVRQLRTGWYDGPA 95 (553)
Q Consensus 17 ~~~~~~~~~~~l~~~~~~~~~~g-~~~~~~~~NG~~pGP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~ 95 (553)
+.+.+.+|+++|.+++ -++| ..+.++.+||++|||+||+++||+|+|+|+|.|++++||||||+++... +||++
T Consensus 7 ~p~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~t~PGP~i~~~~Gd~v~v~~~N~l~~~~siH~HG~~~~~~--~dG~~ 81 (313)
T 3tas_A 7 APAGGEVKRIKLYAER---LGGGQMGYGLEKGKATIPGPLIELNEGDTLHIEFENTMDVPVSLHVHGLDYEIS--SDGTK 81 (313)
T ss_dssp CCCCCCEEEEEEEEEE---CGGGCEEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCCGG--GSCST
T ss_pred CCCCceEEEEEEEEEE---cCCCceeeeeecCCccccCCeEEEECCCEEEEEEEECCCCCccEeecCCcCCcc--CCCCc
Confidence 3456778999998753 2455 3355677899999999999999999999999999999999999998765 99998
Q ss_pred CccCCCCCCCCceEEEEEeC------------CCCcceEEecChhhh-------hccceeeEEEcCCCCCCCCCCCCCcc
Q 008799 96 YITQCPIQPGQSYVYNFTLT------------GQRGTLLWHAHISWL-------RATVHGAIVILPKRSVPYPFPKADKE 156 (553)
Q Consensus 96 ~~tq~~i~pG~~~~y~~~~~------------~~~Gt~wYH~H~~~~-------~~Gl~G~liV~~~~~~~~~~~~~~~e 156 (553)
.+||+|.||++|+|+|++. +++||||||||..++ .+||+|+|||+++.+. .+|+|
T Consensus 82 -~~~~~i~PG~~~~Y~~~~~~P~~~~~~~~~~~~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~~~-----~~d~e 155 (313)
T 3tas_A 82 -QSRSDVEPGGTRTYTWRTHVPGRRADGTWRAGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGDV-----LPDRT 155 (313)
T ss_dssp -TTTCCBCTTCEEEEEEBCCCCEECTTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCB-----CCSEE
T ss_pred -cccCCcCCCCEEEEEEEeccCCccccccccCCCceEEEEeecCcccccchhhhhccccCceEeeccccc-----ccccc
Confidence 5899999999999999862 368999999998654 2799999999998753 35899
Q ss_pred eEEEEeeeeccCHHHHHHHHHhCCCCCCCCceEEECCcCCCCCCCCCCCeEEEEEcCCEEEEEEEecCCCceEEEEEcCc
Q 008799 157 KIIVFGEWWKADVEAVINQATQMGVAPNVSDAHTINGHPGPVTNCTSQGFTLHVESGKTYLLRIVNAAVNDELFFKIAGH 236 (553)
Q Consensus 157 ~~l~~~d~~~~~~~~~~~~~~~~g~~~~~~~~~~iNG~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh 236 (553)
++|+++|| ++||+..+. .+.++++.|++|||||+|++. ..+.||||||
T Consensus 156 ~~l~~~d~-------------------------t~Ng~~~~~------~~~l~v~~Ge~vr~~liN~g~-~~hpfHlHGh 203 (313)
T 3tas_A 156 HTIVFNDM-------------------------TINNRPAHT------GPDFEATVGDRVEFVMITHGE-YYHTFHLHGH 203 (313)
T ss_dssp EEEEEETT-------------------------EETTCCTTC------CCCEEEETTCEEEEEEEEESS-CCEEEEETTC
T ss_pred ceeeccch-------------------------hcccCCccc------ccccccccCCEEEEEEecccc-cceeeeecCC
Confidence 99999987 356665422 167999999999999999995 4567999999
Q ss_pred eEEEEeeC
Q 008799 237 NLTVVEVD 244 (553)
Q Consensus 237 ~~~via~D 244 (553)
.|++++.|
T Consensus 204 ~F~v~~~~ 211 (313)
T 3tas_A 204 RWADNRTG 211 (313)
T ss_dssp CEESSTTS
T ss_pred eeEEEEEC
Confidence 99864433
No 25
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A
Probab=100.00 E-value=2.2e-48 Score=394.36 Aligned_cols=263 Identities=22% Similarity=0.300 Sum_probs=219.9
Q ss_pred cccceEEEEEEEEEEEeec-ccceeeEEEECCCCCCCeEeecCCCEEEEEEEeCCC--CCceeeeCCCcccCCCCCCCCC
Q 008799 19 VESAVRHYNFTVVMTNMTK-LCASKSIVTVNGKFPGPTLHAREDDNVIVRVTNHVK--YNVTIHWHGVRQLRTGWYDGPA 95 (553)
Q Consensus 19 ~~~~~~~~~l~~~~~~~~~-~g~~~~~~~~NG~~pGP~i~v~~Gd~v~v~l~N~l~--~~~~iH~HG~~~~~~~~~DGv~ 95 (553)
..+.+++|+|++++..+++ +|..+.+|+|||++|||+|+|++||+|+|+|+|.++ .++++||||+.. +||++
T Consensus 34 ~~~~~~~~~l~~~~~~~~~~~G~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~~~~~~~~ih~HG~~~-----~dG~~ 108 (327)
T 1kbv_A 34 DYPAKVRVKMETVEKTMKMDDGVEYRYWTFDGDVPGRMIRVREGDTVEVEFSNNPSSTVPHNVDFHAATG-----QGGGA 108 (327)
T ss_dssp SSCCEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCBEEEETTCEEEEEEEECTTCSSCBCCEETTCCS-----GGGGT
T ss_pred CCCCEEEEEEEEEEEEEEeCCCcEEEEEEECCccCCCeEEEeCCCEEEEEEEECCCCCCceeeEeCcccc-----CCCCC
Confidence 4567899999999999998 799999999999999999999999999999999996 589999999862 68887
Q ss_pred CccCCCCCCCCceEEEEEeCCCCcceEEecChhh---hh-ccceeeEEEcCCCCCCCCCCCCCcceEEEEeeeeccCHHH
Q 008799 96 YITQCPIQPGQSYVYNFTLTGQRGTLLWHAHISW---LR-ATVHGAIVILPKRSVPYPFPKADKEKIIVFGEWWKADVEA 171 (553)
Q Consensus 96 ~~tq~~i~pG~~~~y~~~~~~~~Gt~wYH~H~~~---~~-~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~ 171 (553)
..+ .|.||++++|+|++ +++||||||||.+. +. +||+|+|||++++. ++.+|+|++++++||++.+...
T Consensus 109 ~~~--~i~PG~~~~y~f~~-~~~Gt~wyH~h~~~~~~~~~~Gl~G~~iV~~~~~----~p~~d~e~~l~~~d~~~~~~~~ 181 (327)
T 1kbv_A 109 AAT--FTAPGRTSTFSFKA-LQPGLYIYHCAVAPVGMHIANGMYGLILVEPKEG----LPKVDKEFYIVQGDFYTKGKKG 181 (327)
T ss_dssp TTT--CBCTTEEEEEEEEC-CSCEEEEEECCCSSHHHHHHTTCEEEEEEECTTC----CCCCSEEEEEEEEEECBSSCTT
T ss_pred cce--eecCCCEEEEEEEC-CCCeEEEEEeCCCChhhhhhcceEEEEEEecCCC----CCCCceEEEEEeeeeeccCccc
Confidence 543 59999999999998 78999999999743 44 89999999998653 3357899999999999865210
Q ss_pred -------HHHHHHhCCCCCCCCceEEECCcCCCCCCCCCCCeEEEEEcCCEEEEEEEecCCCceEEEEEcCceEEEEeeC
Q 008799 172 -------VINQATQMGVAPNVSDAHTINGHPGPVTNCTSQGFTLHVESGKTYLLRIVNAAVNDELFFKIAGHNLTVVEVD 244 (553)
Q Consensus 172 -------~~~~~~~~g~~~~~~~~~~iNG~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~D 244 (553)
.+.... + ..++.++|||+.+++..| +.+++++|++|||||+|+|+...+.|||+||+|+||+.|
T Consensus 182 ~~g~~~~~~~~~~--~---~~~~~~~iNG~~~~~~~~----~~l~v~~G~~vRlRliN~~~~~~~~~~l~Gh~f~vi~~D 252 (327)
T 1kbv_A 182 AQGLQPFDMDKAV--A---EQPEYVVFNGHVGALTGD----NALKAKAGETVRMYVGNGGPNLVSSFHVIGEIFDKVYVE 252 (327)
T ss_dssp CCEEECBCHHHHH--H---TCCSEEEETTSTTTTSGG----GCEEEETTEEEEEEEEEEESSCCEEEEEETCCBSEEEGG
T ss_pred cccccccChhHhc--c---CCCceEEEcCcccCCCCc----eeEEeCCCCEEEEEEECCCCCCceeEEEeCCEEEEEEcC
Confidence 011111 1 235899999998754322 569999999999999999988899999999999999999
Q ss_pred CCcccceEeeEEEeCCCccEEEEEEeCCCCCeeEEEEeeccccccccCCccEEEEEEEcCCCC
Q 008799 245 SSYTKPFKTDTIFIGPGQTTNALLTADKKIGKYLITISPFMDTIVAVNNVTGIAFLRYKGTVA 307 (553)
Q Consensus 245 G~~~~p~~~d~~~l~pgeR~dv~v~~~~~~g~~~i~~~~~~~~~~~~~~~~~~ail~y~~~~~ 307 (553)
|.+++|..++++.|+||||+||+|++++ ||.|+++|+..... .+.+..++++|.+...
T Consensus 253 G~~~~p~~~d~l~l~pGer~dv~v~~~~-pG~y~l~~h~~~~~----~~~g~~a~l~~~g~~~ 310 (327)
T 1kbv_A 253 GGKLINENVQSTIVPAGGSAIVEFKVDI-PGNYTLVDHSIFRA----FNKGALGQLKVEGAEN 310 (327)
T ss_dssp GSSCEECSBSEEEECTTEEEEEEEEECS-CEEEEEEESSTHHH----HHSSCEEEEEEESCCC
T ss_pred CCcCCCCceeEEEECCCCEEEEEEEeCC-CeEEEEEecccccc----ccCCcEEEEEECCCCC
Confidence 9999999999999999999999999997 79999999865431 1234689999987643
No 26
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP}
Probab=100.00 E-value=6.4e-48 Score=384.04 Aligned_cols=237 Identities=28% Similarity=0.370 Sum_probs=205.7
Q ss_pred ccceEEEEEEEEEEEeecc-cceeeEEEECCCCCCCeEeecCCCEEEEEEEeCCCCCceeeeCCCcccCCCCCCCCCCcc
Q 008799 20 ESAVRHYNFTVVMTNMTKL-CASKSIVTVNGKFPGPTLHAREDDNVIVRVTNHVKYNVTIHWHGVRQLRTGWYDGPAYIT 98 (553)
Q Consensus 20 ~~~~~~~~l~~~~~~~~~~-g~~~~~~~~NG~~pGP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~t 98 (553)
....++|+|++++..+++. |..+++|+|||++|||+|++++||+|+|+|+|.++.+++|||||++. .++||+|+++
T Consensus 31 ~~~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pgP~i~~~~Gd~v~v~~~N~~~~~~~iH~HG~~~---~~~DG~p~~~ 107 (288)
T 3gdc_A 31 GRTLREWDIVAVDKDFEIAPGIIFKGWSYNGRIPGPTLWAREGDALRIHFTNAGAHPHTIHFHGVHR---ATMDGTPGIG 107 (288)
T ss_dssp SCEEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEECSSSCBCCEESSCCC---GGGSCCTTST
T ss_pred CCcEEEEEEEEEEEEEEeCCCcEEEEEEECCccCCCcEEEeCCCEEEEEEEeCCCCcccEEeccccc---cccCCCCCcc
Confidence 4557999999999998874 89999999999999999999999999999999999999999999983 4599999999
Q ss_pred CCCCCCCCceEEEEEeCCCCcceEEecChhh---hh-ccceeeEEEcCCCCCCCCCCCCCcceEEEEeeeeccCHHHHHH
Q 008799 99 QCPIQPGQSYVYNFTLTGQRGTLLWHAHISW---LR-ATVHGAIVILPKRSVPYPFPKADKEKIIVFGEWWKADVEAVIN 174 (553)
Q Consensus 99 q~~i~pG~~~~y~~~~~~~~Gt~wYH~H~~~---~~-~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~~ 174 (553)
|++|.||++++|+|++ +++||||||||.+. +. +||+|+|||+++...+ ..++|++|+++||+..+
T Consensus 108 ~~~i~PG~~~~y~f~~-~~~Gt~~yH~H~~~~~~~~~~Gl~G~liV~~~~~~~----~~d~e~~l~~~d~~~~~------ 176 (288)
T 3gdc_A 108 AGSIAPGQSFTYEFDA-TPFGTHLYHCHQSPLAPHIAKGLYGGFIVEPKEGRP----PADDEMVMVMNGYNTDG------ 176 (288)
T ss_dssp TCSBCTTCEEEEEEEC-CSCEEEEEECCCSSHHHHHHTTCEEEEEEECSSCCC----CCSEEEEEEEEEECCSS------
T ss_pred ceeECCCCEEEEEEEc-CCCccEEEEecCcchHHHHhCcCeEEEEEeCCccCC----CCcceEEEEEeeEecCC------
Confidence 9999999999999998 89999999999974 33 8999999999887532 35799999999998762
Q ss_pred HHHhCCCCCCCCceEEECCcCCCCCCCCCCCeEEEEEcCCEEEEEEEecCCCc-eEEEEEcCceEEEEeeCCCcccceEe
Q 008799 175 QATQMGVAPNVSDAHTINGHPGPVTNCTSQGFTLHVESGKTYLLRIVNAAVND-ELFFKIAGHNLTVVEVDSSYTKPFKT 253 (553)
Q Consensus 175 ~~~~~g~~~~~~~~~~iNG~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~-~~~~~i~gh~~~via~DG~~~~p~~~ 253 (553)
+ ..++.++|||+.+++. .+.++++.|+++|||++|++... .+.||||||.|+|++.++....|...
T Consensus 177 -----g---~~~~~~~iNG~~~~~~-----~~~l~v~~Ge~vr~~l~N~g~~~~~H~fHlhG~~f~v~~~g~~~~~~~~~ 243 (288)
T 3gdc_A 177 -----G---DDNEFYSVNGLPFHFM-----DFPVKVKQHELVRIHLINVLEYDPINSFHIHGNFFHYYPTGTMLTPSEYT 243 (288)
T ss_dssp -----T---TCCSEEEETTSTTHHH-----HSCEEEETTCCEEEEEEECCCSSSEEEEEETTCCEEEEETTCCSSCSEEE
T ss_pred -----C---CCcceEEECccccccc-----CcccccCCCCEEEEEEEeCCCCCcceeEEEcCCEEEEEcCCCccCCCcee
Confidence 1 1347999999976211 13689999999999999999654 67899999999999844433367899
Q ss_pred eEEEeCCCccEEEEEEeCCCCCeeEEEEeec
Q 008799 254 DTIFIGPGQTTNALLTADKKIGKYLITISPF 284 (553)
Q Consensus 254 d~~~l~pgeR~dv~v~~~~~~g~~~i~~~~~ 284 (553)
|++.|.||||++|++++++ ||.|.++||..
T Consensus 244 Dtv~v~pg~~~~v~~~~~~-pG~~~~hCH~~ 273 (288)
T 3gdc_A 244 DTISQVQGQRGILELRFPY-PGKFMFHAHKT 273 (288)
T ss_dssp SEEEEETTCEEEEEECCCS-CEEEEEECSSH
T ss_pred eEEEeCCCceEEEEEECCC-CEEEEEEecCh
Confidence 9999999999999999996 79999999853
No 27
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor}
Probab=100.00 E-value=1.1e-45 Score=376.06 Aligned_cols=134 Identities=22% Similarity=0.352 Sum_probs=108.1
Q ss_pred ccceEEEEEEEEEEEeeccccee-eEEEECCCCCCCeEeecCCCEEEEEEEeCCCCCceeeeCCCcccCCCCCCCCCCcc
Q 008799 20 ESAVRHYNFTVVMTNMTKLCASK-SIVTVNGKFPGPTLHAREDDNVIVRVTNHVKYNVTIHWHGVRQLRTGWYDGPAYIT 98 (553)
Q Consensus 20 ~~~~~~~~l~~~~~~~~~~g~~~-~~~~~NG~~pGP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~t 98 (553)
.+.+++|+|++++. ++|... ..+.+||++|||+|+|++||+|+|+|+|.++++++|||||+.+.. ++||++ ++
T Consensus 45 ~g~~~~~~l~~~~~---~~~~~~~~~~~~ng~~pGP~I~v~~Gd~v~v~~~N~l~~~~sih~HG~~~~~--~~DG~~-~t 118 (343)
T 3cg8_A 45 GGEVRHLKMYAEKL---ADGQMGYGFEKGKASVPGPLIEVNEGDTLHIEFTNTMDVRASLHVHGLDYEI--SSDGTA-MN 118 (343)
T ss_dssp CCCEEEEEEEEEEC---GGGCEEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCCG--GGSCCT-TT
T ss_pred CCeEEEEEEEEEEc---cCCeeeeeeecCCCCccCCEEEEECCCEEEEEEEECCCCCeeEEecCcccCC--cCCCcc-cc
Confidence 45679999999874 344321 122358999999999999999999999999999999999999873 599999 89
Q ss_pred CCCCCCCCceEEEEEeCC------------CCcceEEecChh------hhh-ccceeeEEEcCCCCCCCCCCCCCcceEE
Q 008799 99 QCPIQPGQSYVYNFTLTG------------QRGTLLWHAHIS------WLR-ATVHGAIVILPKRSVPYPFPKADKEKII 159 (553)
Q Consensus 99 q~~i~pG~~~~y~~~~~~------------~~Gt~wYH~H~~------~~~-~Gl~G~liV~~~~~~~~~~~~~~~e~~l 159 (553)
||+|.||++++|+|++.+ ++|+||||||.+ .+. +||+|++||+++.+.. .|+|++|
T Consensus 119 ~~~I~PG~~~~y~f~~~~pg~~~~g~~~~~~~Gt~~YH~h~~~~~~~~~~~~~Gl~G~~iV~~~~~~~-----pd~e~~l 193 (343)
T 3cg8_A 119 KSDVEPGGTRTYTWRTHKPGRRDDGTWRPGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGDVL-----PDATHTI 193 (343)
T ss_dssp TCSBCTTCEEEEEEECCCCEECTTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCCC-----CSEEEEE
T ss_pred cccccCCCEEEEEEEeCCCCcccccccCCCCceEEEEecCccccccchhhhhcCCeEEEEEecCCCCC-----CCceEEE
Confidence 999999999999999832 359999999973 233 8999999999876532 3677777
Q ss_pred EEeee
Q 008799 160 VFGEW 164 (553)
Q Consensus 160 ~~~d~ 164 (553)
+++||
T Consensus 194 ~~~d~ 198 (343)
T 3cg8_A 194 VFNDM 198 (343)
T ss_dssp EEETT
T ss_pred Ecccc
Confidence 77653
No 28
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A*
Probab=100.00 E-value=1.3e-46 Score=433.83 Aligned_cols=398 Identities=14% Similarity=0.110 Sum_probs=264.0
Q ss_pred ceeeEEEECCCCCC--CeEeecCCCEEEEEEEeCCCCCceeeeCCCcccC-CCCCCCCCCccCCCCCCCCceEEEEEeCC
Q 008799 40 ASKSIVTVNGKFPG--PTLHAREDDNVIVRVTNHVKYNVTIHWHGVRQLR-TGWYDGPAYITQCPIQPGQSYVYNFTLTG 116 (553)
Q Consensus 40 ~~~~~~~~NG~~pG--P~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~-~~~~DGv~~~tq~~i~pG~~~~y~~~~~~ 116 (553)
..+.+.++||++|| |+|++++||+|+++|.|. .+.+||||+++.+ +.|+||++.+| |+|.||.+++|+|.+ +
T Consensus 616 ~~~~~~~iNG~~~g~~P~l~~~~gd~v~~~v~~~---g~~~~~Hgl~~~g~t~~~dG~~~~t-~~i~pg~~~t~~~~~-~ 690 (1065)
T 2j5w_A 616 ESNKMHSMNGFMYGNQPGLTMCKGDSVVWYLFSA---GNEADVHGIYFSGNTYLWRGERRDT-ANLFPQTSLTLHMWP-D 690 (1065)
T ss_dssp HHTEEEEETTBCTTCCCCCEEETTCCEEEEEECC---CSTTCCEEEEETTCCEEETTEEESE-EEECTTCEEEEEECC-C
T ss_pred ccceEEEEeeEecCCCCceEEeCCCEEEEEEEcC---CCcceEEeeEEeCCceeecCeecce-EeecCCceEEEEEec-C
Confidence 46789999999999 889999999999999965 4459999999998 88999999999 999999999999998 7
Q ss_pred CCcceEEecChhhhh-ccceeeEEEcCCCCCCCCCCCCCcceEEEE----eeeeccCHHHHHHHHH-hCCCCCCCCceEE
Q 008799 117 QRGTLLWHAHISWLR-ATVHGAIVILPKRSVPYPFPKADKEKIIVF----GEWWKADVEAVINQAT-QMGVAPNVSDAHT 190 (553)
Q Consensus 117 ~~Gt~wYH~H~~~~~-~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~----~d~~~~~~~~~~~~~~-~~g~~~~~~~~~~ 190 (553)
++||||||||...++ +||.|.++|++......+..+++.|.++++ .||++.+......+.. ..+.. +...+
T Consensus 691 ~~Gt~~~h~h~~~~~~~Gm~g~~~V~~~~~~~~~~~~yd~e~~~~iaa~~~dW~~~~~~~~~~~~~~~~~~~---p~~~~ 767 (1065)
T 2j5w_A 691 TEGTFNVECLTTDHYTGGMKQKYTVNQCRRQSEDSTFYLGERTYYIAAVEVEWDYSPQREWEKELHHLQEQN---VSNAF 767 (1065)
T ss_dssp SCEEEEEEECSHHHHHTTCEEEEEEECCSCCCSCCCCCSEEEEEEEEEEEEEEESCSCCHHHHHHHHHHTCC---CCCTT
T ss_pred CCeEEEEecCCCcccCCCcEEEEEEcCCccccCCccCCCcceEEEEeeeeccccCCcchhhhhhccCCCccC---cccee
Confidence 999999999999987 999999999987654444456788999999 8999877665433221 11211 22233
Q ss_pred ECCcCC----------------CCCCC---C-------C-CCeEEEEEcCCEEEEEEEecCCCceEEEEEcCceEEEEee
Q 008799 191 INGHPG----------------PVTNC---T-------S-QGFTLHVESGKTYLLRIVNAAVNDELFFKIAGHNLTVVEV 243 (553)
Q Consensus 191 iNG~~~----------------~~~~~---~-------~-~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~ 243 (553)
+|+... ..+.. . . ..|+|++++|+++++|+.|... ..+.+|.||..+ ...
T Consensus 768 ~n~~~~~iG~tY~k~~y~~~~d~tft~~~~r~~~~~~v~~pGP~I~v~~Gd~v~v~l~N~~~-~~~sih~HGl~~--~~~ 844 (1065)
T 2j5w_A 768 LDKGEFYIGSKYKKVVYRQYTDSTFRVPVERKAEEEHLGILGPQLHADVGDKVKIIFKNMAT-RPYSIHAHGVQT--ESS 844 (1065)
T ss_dssp TCCTTTCCCSEEEEEEEEEESSTTCCSBCCCCGGGGGGTTSCCCEEEETTEEEEEEEEECSS-SCBCCEESSCBC--SCS
T ss_pred ecCCCccccceEeeeEEEEEcCCcceecccCCccccccCCCCCEEEEecCCEEEEEEEeCCC-CCceEeeccccc--cCC
Confidence 333210 00110 0 0 1289999999999999999975 556688887443 221
Q ss_pred CCCcccceEeeEEEeCCCccEEEEEEeCCC---------CCeeEEEEeeccccccccCCccEEEEEEEcCCCCCCCCccC
Q 008799 244 DSSYTKPFKTDTIFIGPGQTTNALLTADKK---------IGKYLITISPFMDTIVAVNNVTGIAFLRYKGTVAFSSTTLT 314 (553)
Q Consensus 244 DG~~~~p~~~d~~~l~pgeR~dv~v~~~~~---------~g~~~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~ 314 (553)
| ...+.||++++..+...+. +|.||++++.....+ .... ..+.|.+.....
T Consensus 845 -~---------~~~i~PG~~~ty~~~~~~~~gp~~~~~~~gt~wYhsh~~~~~q-~~~G--L~G~liV~~~~~------- 904 (1065)
T 2j5w_A 845 -T---------VTPTLPGETLTYVWKIPERSGAGTEDSACIPWAYYSTVDQVKD-LYSG--LIGPLIVCRRPY------- 904 (1065)
T ss_dssp -C---------CCCBCTTCEEEEEEECCGGGSCCTTSCSEEEEEEECCTTHHHH-HHTT--CEEEEEEECCC--------
T ss_pred -C---------CceeCCCCeEEEEEEecCccCCccccCCceEEEEecCCChHHh-hhcc--ccceeEecCccc-------
Confidence 2 1256799998888877542 258999987421000 0111 223233221110
Q ss_pred CCCCCCCcccccccccccccccCCCCCCCCCCCcceEEEEEee-eeccCCccCCCCceeeEeeeceeeec-C-Cchhhhh
Q 008799 315 NVPAINATEVTNTFSDNLRSLNSKRYPAKVPLTVDHSLLLTMA-VAVNPCATCPNGTKVGAAMNNISFVM-P-TTALLQA 391 (553)
Q Consensus 315 ~~p~~~~~~~~~~~~~~l~~l~~~~~p~~~p~~~d~~~~~~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~-p-~~~~~~~ 391 (553)
+. + ...+ .+.++.+.+. ++.. .. .....|+.+|.. | .++++..
T Consensus 905 -l~--------------------~---~~~~--~d~D~~l~~~~~d~~-------~~-~y~~~n~~~~~~~P~~v~~~~~ 950 (1065)
T 2j5w_A 905 -LK--------------------V---FNPR--RKLEFALLFLVFDEN-------ES-WYLDDNIKTYSDHPEKVNKDDE 950 (1065)
T ss_dssp ----------------------------CCC--CEEEEEEEEEEEEGG-------GS-TTHHHHHHHHCSCGGGCCTTCH
T ss_pred -cc--------------------c---cCCC--cceEEEEEEEeecCC-------cc-eeeccCcccccCCccccCcchh
Confidence 00 0 0011 1222222111 1100 00 000112222220 1 1111110
Q ss_pred hhccccccccCCCCCCCCeeeccCCCCCCccccCCCeeEEEecCCCEEEEEEEcCCCCCCCCCCeeecCCceEEEeeCCC
Q 008799 392 HYYKISGVFTDDFPAKPPIAFNYTGNYTGTLQTTNGTRLYRLAYNSTVQLVLQGTTVIAPENHPTHLHGFNFFAVGKGSG 471 (553)
Q Consensus 392 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~i~n~~~~~~~~HP~HlHG~~f~Vl~~g~g 471 (553)
.+.. .+..+. +|+....+...+.++.|++|+|+|.|.+. ..+.||||||||.|+|++++
T Consensus 951 ~~~~------------~~~~~~------iNG~~~~~~~~~~v~~G~~vr~~l~N~g~-~~~~HpfHlHG~~F~vv~~~-- 1009 (1065)
T 2j5w_A 951 EFIE------------SNKMHA------INGRMFGNLQGLTMHVGDEVNWYLMGMGN-EIDLHTVHFHGHSFQYKHRG-- 1009 (1065)
T ss_dssp HHHH------------HTEEEE------ETTBCTTCCCCCEEETTCEEEEEEEECCS-TTCCEEEEESSCCEEETTTT--
T ss_pred hhhc------------cCceEE------ECCccCCCCccEEeCCCCEEEEEEEeCCC-CCcceeEEEcccEEEEEecC--
Confidence 0000 000111 22233334556789999999999999642 25689999999999999763
Q ss_pred CCCCCCCCCCCCCCCCCcceeeEecCCcEEEEEEEecCceeeEEeecchhhHhccceEEEEEeCCCC
Q 008799 472 NFDPNKDPQKFNLVDPVERNTISVPTAGWTAIRFRADNPGVWFLHCHLEVHTSWGLKMAFVVDNGKG 538 (553)
Q Consensus 472 ~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~adnpG~w~~HCHil~H~d~GM~~~~~V~~~~~ 538 (553)
|.|||||.|+|+++++|+|++||||.|+||||+++|++.|||+.|.|.+...
T Consensus 1010 ---------------p~~~DTv~v~pg~~~~v~~~ad~pG~w~~HCH~~~H~~~GM~~~~~V~~~~~ 1061 (1065)
T 2j5w_A 1010 ---------------VYSSDVFDIFPGTYQTLEMFPRTPGIWLLHCHVTDHIHAGMETTYTVLQNED 1061 (1065)
T ss_dssp ---------------CEEESEEEECTTCEEEEEECCCSCEEEEEEECCHHHHHTTCEEEEEEECCC-
T ss_pred ---------------CceeeEEEECCCCeEEEEEECCCCeeEEEEeCCHHHHhcCCcEEEEEecCcc
Confidence 6799999999999999999999999999999999999999999999987643
No 29
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis}
Probab=100.00 E-value=2.4e-44 Score=380.86 Aligned_cols=263 Identities=21% Similarity=0.267 Sum_probs=219.8
Q ss_pred cccceEEEEEEEEEEEeec-ccceeeEEEECCCCCCCeEeecCCCEEEEEEEeCCC--CCceeeeCCCcccCCCCCCCCC
Q 008799 19 VESAVRHYNFTVVMTNMTK-LCASKSIVTVNGKFPGPTLHAREDDNVIVRVTNHVK--YNVTIHWHGVRQLRTGWYDGPA 95 (553)
Q Consensus 19 ~~~~~~~~~l~~~~~~~~~-~g~~~~~~~~NG~~pGP~i~v~~Gd~v~v~l~N~l~--~~~~iH~HG~~~~~~~~~DGv~ 95 (553)
+.+.+++|+|++++..+++ +|..+.+|+|||++|||+|++++||+|+|+|+|.++ .+++|||||+.+ +||++
T Consensus 24 ~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pgp~i~v~~Gd~v~v~~~N~l~~~~~~~iH~HG~~~-----~dG~~ 98 (442)
T 2zoo_A 24 DHSAKVVINLETREQVGRIADGVEYVFWSFGETVPGSFIRVREGDEIEFNLSNHPSSKMPHNIDLHAVTG-----PGGGA 98 (442)
T ss_dssp SSCCEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCBEEEETTCEEEEEEEECTTCSSCBCCEETTCCS-----GGGGG
T ss_pred CCCcEEEEEEEEEEEEEEcCCCcEEEEEEECCcCCCCcEEEeCCCEEEEEEEECCCCCCCCCEEecCCcC-----CCCCC
Confidence 5677899999999999995 799999999999999999999999999999999985 599999999873 68877
Q ss_pred CccCCCCCCCCceEEEEEeCCCCcceEEecChh---hhh-ccceeeEEEcCCCCCCCCCCCCCcceEEEEeeeeccCHHH
Q 008799 96 YITQCPIQPGQSYVYNFTLTGQRGTLLWHAHIS---WLR-ATVHGAIVILPKRSVPYPFPKADKEKIIVFGEWWKADVEA 171 (553)
Q Consensus 96 ~~tq~~i~pG~~~~y~~~~~~~~Gt~wYH~H~~---~~~-~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~ 171 (553)
..+ +|.||++++|+|++ +++||||||||.+ .+. +||+|+|||++++.. +.+|+|++|+++||++.+...
T Consensus 99 ~~~--~i~pg~~~~y~f~~-~~~Gt~~yH~H~~~~~~~~~~Gl~G~~iv~~~~~~----~~~d~e~~l~l~d~~~~~~~~ 171 (442)
T 2zoo_A 99 ESS--FTAPGHTSTFNFKA-LNPGLYIYHCATAPVGMHIANGMYGLILVEPKEGL----APVDREYYLVQGDFYTKGEFG 171 (442)
T ss_dssp GGC--CBCTTCEEEEEEEC-CSCEEEEEECCCSSHHHHHHTTCEEEEEEECTTCC----CCCSEEEEEEEEEECBSSCTT
T ss_pred ccE--EECCCCEEEEEEEc-CCCeEEEEecCCCChHHHHhCccEEEEEEeCCCCC----CCCCceEEEEeeeeeccCccc
Confidence 644 69999999999998 7899999999853 344 899999999977532 256899999999998865310
Q ss_pred -------HHHHHHhCCCCCCCCceEEECCcCCCCCCCCCCCeEEEEEcCCEEEEEEEecCCCceEEEEEcCceEEEEeeC
Q 008799 172 -------VINQATQMGVAPNVSDAHTINGHPGPVTNCTSQGFTLHVESGKTYLLRIVNAAVNDELFFKIAGHNLTVVEVD 244 (553)
Q Consensus 172 -------~~~~~~~~g~~~~~~~~~~iNG~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~D 244 (553)
.+.. .. ...+++++|||+.++... .+.|++++|++|||||+|+|....+.|||+||+|+||+.|
T Consensus 172 ~~~~~~~~~~~--~~---~~~~~~~liNG~~~~~~~----~~~l~v~~G~~vrlrliN~~~~~~~~~~i~g~~~~vi~~D 242 (442)
T 2zoo_A 172 EAGLQPFDMAK--AI---DEDADYVVFNGSVGSTTD----ENSLTAKVGETVRLYIGNGGPNLVSSFHVIGEIFDTVYVE 242 (442)
T ss_dssp CCEEECBCHHH--HH---TTCCSEEEETTSTTTTSG----GGCEEEETTCEEEEEEEEEESSCCEEEEEETCCBSEEEGG
T ss_pred ccccccCChhH--hc---cCCCCEEEECCCcCCCCC----CCceEeCCCCEEEEEEEeCCCCCceeeEEcCCEEEEEecC
Confidence 0011 11 134589999999763321 2579999999999999999988889999999999999999
Q ss_pred CCcccceEeeEEEeCCCccEEEEEEeCCCCCeeEEEEeeccccccccCCccEEEEEEEcCCCC
Q 008799 245 SSYTKPFKTDTIFIGPGQTTNALLTADKKIGKYLITISPFMDTIVAVNNVTGIAFLRYKGTVA 307 (553)
Q Consensus 245 G~~~~p~~~d~~~l~pgeR~dv~v~~~~~~g~~~i~~~~~~~~~~~~~~~~~~ail~y~~~~~ 307 (553)
|.+++|..++++.|.||||+||+|++++ +|.|+++|+.+... .+....++++|.+...
T Consensus 243 G~~~~p~~~~~~~l~pg~r~~v~v~~~~-~G~y~~~~~~~~~~----~~~g~~a~l~v~~~~~ 300 (442)
T 2zoo_A 243 GGSLKNHNVQTTLIPAGGAAIVEFKVEV-PGTFILVDHSIFRA----FNKGALAMLKVEGPDD 300 (442)
T ss_dssp GSSCEECSBSEEEECTTEEEEEEEECCS-CEEEEEEESSTHHH----HTTSCEEEEEEESCCC
T ss_pred CccCCCccceEEEECCCeeEEEEEEcCC-CCeEEEEecccccc----cccCceEEEEecCCCC
Confidence 9999999999999999999999999997 79999999865431 1235689999987643
No 30
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP}
Probab=100.00 E-value=2.3e-44 Score=359.59 Aligned_cols=227 Identities=18% Similarity=0.243 Sum_probs=187.1
Q ss_pred ccccccceEEEEEEEEEEEeecccceeeEEEECCCCCCCeEeecCCCEEEEEEEeCCCCCceeeeCCCcccCCCCCCCCC
Q 008799 16 PALVESAVRHYNFTVVMTNMTKLCASKSIVTVNGKFPGPTLHAREDDNVIVRVTNHVKYNVTIHWHGVRQLRTGWYDGPA 95 (553)
Q Consensus 16 ~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~NG~~pGP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~ 95 (553)
...+.+.+|+|+|.+++..-.+ ..+.++.+||++|||+||+++||+|+|+|+|.|++++||||||+.+.+. +||++
T Consensus 22 p~~~~~~~~~~~~~a~~~~~~~--~~~~~~~~~gt~PGP~i~~~~GD~v~v~~~N~l~~~~siH~HG~~~~~~--~DG~~ 97 (299)
T 3t9w_A 22 PVRAQGTTRRITMYAEKISDEL--YGYGLAPGGATVPGPVLEMWEGDTLEIDLVNTTDRVLSLHPHGVDYDVN--SDGTL 97 (299)
T ss_dssp -----CCEEEEEEEEEEEETTE--EEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCCGG--GSCCT
T ss_pred CcccCCCEEEEEEEEEecCCCc--eeeeecCCCCCccCceEEEECCeEEEEEEEECCCCCccEEeCCcccCCc--cCCCc
Confidence 4456788999999998754222 3345566799999999999999999999999999999999999998754 99996
Q ss_pred CccCCCCCCCCceEEEEEeC------------CCCcceEEecChhhhh-------ccceeeEEEcCCCCCCCCCCCCCcc
Q 008799 96 YITQCPIQPGQSYVYNFTLT------------GQRGTLLWHAHISWLR-------ATVHGAIVILPKRSVPYPFPKADKE 156 (553)
Q Consensus 96 ~~tq~~i~pG~~~~y~~~~~------------~~~Gt~wYH~H~~~~~-------~Gl~G~liV~~~~~~~~~~~~~~~e 156 (553)
++||+|.||++|+|+|+++ +++||||||||.+++. +||+|+|||+++.+. ..|+|
T Consensus 98 -~~~~~i~PG~t~~Y~~~~~~~~~~~~~~~~~~~~gt~~YH~H~~~~~~~~~~~~~GL~G~liV~~~~~~-----~~d~e 171 (299)
T 3t9w_A 98 -MNGSAVMPGQTRRYTWRSHVGYRRADGSWAEGTAGYWHYHDHAMGTEHGTEGVLKGLYGALVVRRQGDL-----LPKRQ 171 (299)
T ss_dssp -TTTCCBCTTCEEEEEEBCCCCEECTTSCEECCCCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCC-----CCSEE
T ss_pred -cccCccCCCCeEEEEEEeecccccCCCcCCCCCceeEEEecCCcccccchhhhcccccceEEEeccccc-----Ccccc
Confidence 8999999999999999873 3689999999986532 699999999988753 35899
Q ss_pred eEEEEeeeeccCHHHHHHHHHhCCCCCCCCceEEECCcCCCCCCCCCCCeEEEEEcCCEEEEEEEecCCCceEEEEEcCc
Q 008799 157 KIIVFGEWWKADVEAVINQATQMGVAPNVSDAHTINGHPGPVTNCTSQGFTLHVESGKTYLLRIVNAAVNDELFFKIAGH 236 (553)
Q Consensus 157 ~~l~~~d~~~~~~~~~~~~~~~~g~~~~~~~~~~iNG~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh 236 (553)
+++++++| .+||+..+. .+.++++.|+++||||+|++... +.||||||
T Consensus 172 ~~l~~~~~-------------------------~~Ng~~~~~------~p~l~v~~Ge~Vr~~liN~~~~~-HpfHlHGh 219 (299)
T 3t9w_A 172 FTVVFNDM-------------------------MINNRAHHD------APTFEANLGERVEWIAIGHGSNF-HTFHLHGH 219 (299)
T ss_dssp EEEEEETT-------------------------EETTCCTTC------CCEEEEETTCEEEEEEEEESSCC-CEEEETTC
T ss_pred ceeeeeee-------------------------eecCccccc------cccceecCCCEEEEEEEeccccc-eeeeEecc
Confidence 99999876 367775422 28899999999999999999755 56999999
Q ss_pred eEEEEeeCCCccc---ceEeeEEEeCCCccEEEEEEeCC--CCCeeEEEEeec
Q 008799 237 NLTVVEVDSSYTK---PFKTDTIFIGPGQTTNALLTADK--KIGKYLITISPF 284 (553)
Q Consensus 237 ~~~via~DG~~~~---p~~~d~~~l~pgeR~dv~v~~~~--~~g~~~i~~~~~ 284 (553)
.|+++..|+.... +..+|++.|.||||++++|.+.+ .||.|+++||..
T Consensus 220 ~F~v~~~g~~~~~~~~~~~~Dtv~v~PGe~~~~~via~~~dnPG~w~~HCHi~ 272 (299)
T 3t9w_A 220 RWLDNRTGMRTSEYDPSPLIDIKDLNPGVSFGFQVIAGEGVGPGMWMYHCHVQ 272 (299)
T ss_dssp CEESSSSSSCCSTTCCCCEESEEECCTTCEEEEEEETTTTTCSEEEEEEECSH
T ss_pred eEEEEecccccCCcCCCCceeeEEeCCceeEEEEEEEeeCCCCeeEEEEcCCH
Confidence 9999999887653 45789999999999999997654 379999999953
No 31
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A
Probab=100.00 E-value=1.5e-43 Score=360.58 Aligned_cols=269 Identities=19% Similarity=0.230 Sum_probs=209.8
Q ss_pred ccccceEEEEEEEEEEEeec-ccceeeEEEECCCCCCCeEeecCCCEEEEEEEeCCCCCceeeeCCCcccCCCCCCCCCC
Q 008799 18 LVESAVRHYNFTVVMTNMTK-LCASKSIVTVNGKFPGPTLHAREDDNVIVRVTNHVKYNVTIHWHGVRQLRTGWYDGPAY 96 (553)
Q Consensus 18 ~~~~~~~~~~l~~~~~~~~~-~g~~~~~~~~NG~~pGP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~ 96 (553)
.+.+.+++|+|++++..+++ +|..+++|+|||++|||+|++++||+|+|+|+|. .+++||||+++......||.+.
T Consensus 27 ~~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pgP~i~~~~Gd~v~v~~~N~---~~~~h~Hg~~~~~~~~~~~~~~ 103 (333)
T 1mzy_A 27 ASGPVINEFEMRIIEKEVQLDEDAYLQAMTFDGSIPGPLMIVHEGDYVELTLINP---PENTMPHNIDFHAATGALGGGG 103 (333)
T ss_dssp SSSCCEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEEC---TTCCSCBCCEETTSCSGGGGGG
T ss_pred CCCCcEEEEEEEEEEEEEEcCCCcEEEEEEECCccCCCcEEecCCCEEEEEEEEC---CCCcccccceecCCCCCCCCCc
Confidence 34568999999999999987 5999999999999999999999999999999999 5789999999876544566566
Q ss_pred ccCCCCCCCCceEEEEEeCCCCcceEEecChhh-----hh-ccceeeEEEcCCCCCCCC--C-CCCCcceEEEEeeeecc
Q 008799 97 ITQCPIQPGQSYVYNFTLTGQRGTLLWHAHISW-----LR-ATVHGAIVILPKRSVPYP--F-PKADKEKIIVFGEWWKA 167 (553)
Q Consensus 97 ~tq~~i~pG~~~~y~~~~~~~~Gt~wYH~H~~~-----~~-~Gl~G~liV~~~~~~~~~--~-~~~~~e~~l~~~d~~~~ 167 (553)
++| |.||++++|+|++ +++||||||||.++ +. +||+|+|||+++...+.+ . ..+|+|++|+++||++.
T Consensus 104 ~~~--i~PG~~~~y~f~~-~~~Gt~~yH~h~~~~~~~~~~~~Gl~G~~iV~~~~~~~~~~~~p~~~d~e~~l~l~D~~~~ 180 (333)
T 1mzy_A 104 LTL--INPGEKVVLRFKA-TRAGAFVYHCAPGGPMIPWHVVSGMAGCIMVLPRDGLKDHEGKPVRYDTVYYIGESDHYIP 180 (333)
T ss_dssp GCC--BCTTEEEEEEEEC-CSCEEEEEECCCSTTHHHHHHHTTCEEEEEEECTTCCBCTTSCBCCCSEEEEEEEEEECCC
T ss_pred eeE--eCCCCEEEEEEEC-CCCEEEEEeecCCcccchhhhhCCCEEEEEEccCcCccccccCCCccchheeeeeeeeccC
Confidence 664 9999999999998 78999999999974 54 899999999976542211 1 14588999999999883
Q ss_pred --CHH---------HHHHH--HHhCCCCCCCCceEEECCcCCCCCCCCCCCeEEEEEcCCEEEEEEEecCCCceEEEEEc
Q 008799 168 --DVE---------AVINQ--ATQMGVAPNVSDAHTINGHPGPVTNCTSQGFTLHVESGKTYLLRIVNAAVNDELFFKIA 234 (553)
Q Consensus 168 --~~~---------~~~~~--~~~~g~~~~~~~~~~iNG~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~ 234 (553)
... ..+.. ....+ ..++.++|||+.+++.+ .+.++|++|++||||++|++....+ ..++
T Consensus 181 ~~~~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ING~~~~~~~----~~~l~v~~Ger~Rl~n~~~~~~~~~-h~i~ 252 (333)
T 1mzy_A 181 KDEDGTYMRFSDPSEGYEDMVAVMDT---LIPSHIVFNGAVGALTG----EGALKAKVGDNVLFVHSQPNRDSRP-HLIG 252 (333)
T ss_dssp BCTTSCBCCCSSHHHHHHHHHHHHTT---TCCSEEEETTSTTTTSG----GGCEEEETTCEEEEEEEESSSCBCE-EEET
T ss_pred ccccccccccccccccccchhHHhhc---cCCcEEEECCcccccCC----CcceEecCCCEEEEEECCCCCcccc-EEEC
Confidence 111 01100 01112 34689999999853310 2679999999988887776644444 4488
Q ss_pred CceEEEEeeCCCccc-ce-EeeEEEeCCCccEEEEEEeCCCCCeeEEEEeeccccccccCCccEEEEEEEcCCC
Q 008799 235 GHNLTVVEVDSSYTK-PF-KTDTIFIGPGQTTNALLTADKKIGKYLITISPFMDTIVAVNNVTGIAFLRYKGTV 306 (553)
Q Consensus 235 gh~~~via~DG~~~~-p~-~~d~~~l~pgeR~dv~v~~~~~~g~~~i~~~~~~~~~~~~~~~~~~ail~y~~~~ 306 (553)
+|.|+|++ ||.+++ |. .+|++.|.||||+||+|++++ ||+|+++||..... ...+..++++|.+..
T Consensus 253 ~h~~~Vi~-dG~~~~~p~~~~dtv~l~pGer~~v~v~a~~-pG~y~~~ch~~~h~----~~~Gm~~~~~v~~~~ 320 (333)
T 1mzy_A 253 GHGDLVWE-TGKFHNAPERDLETWFIRGGTAGAALYKFLQ-PGVYAYVNHNLIEA----VHKGATAHVLVEGEW 320 (333)
T ss_dssp CCEEEEET-TCCTTSCCEEEESBCCBCTTEEEEEEEECCS-CEEEEEEESSHHHH----HTTCCEEEEEEESCC
T ss_pred CCCeEEEe-CCcccCCCccCcceEEECCCceEEEEEEcCC-CEEEEEecChhhhH----hhCCCEEEEEEcCCC
Confidence 99999999 999985 44 589999999999999999997 79999999965321 023457889998654
No 32
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ...
Probab=100.00 E-value=1.9e-42 Score=353.15 Aligned_cols=270 Identities=22% Similarity=0.301 Sum_probs=203.2
Q ss_pred cccceEEEEEEEEEEEeec--ccceeeEEEECCCCCCCeEeecCCCEEEEEEEeCCCCCceeeeCCCcccCCCCCCCCCC
Q 008799 19 VESAVRHYNFTVVMTNMTK--LCASKSIVTVNGKFPGPTLHAREDDNVIVRVTNHVKYNVTIHWHGVRQLRTGWYDGPAY 96 (553)
Q Consensus 19 ~~~~~~~~~l~~~~~~~~~--~g~~~~~~~~NG~~pGP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~ 96 (553)
..+.+++|+|++++..+++ ||..+++|+|||++|||+|++++||+|+|+|+|.+. ++||||+++.+..++||.+.
T Consensus 28 ~~~~~~~~~l~~~~~~~~~~~dg~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~~---~~~~h~~~~h~~~~~~~~~~ 104 (336)
T 1oe1_A 28 SGPKVVEFTMTIEEKKMVIDDKGTTLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPAT---NAMPHNVDFHGATGALGGAK 104 (336)
T ss_dssp CCCCEEEEEEEEEEEEEECSTTCCEEEEEEETTBSSCCCEEEETTCEEEEEEEECTT---CCSCBCCEETTSCSGGGGGG
T ss_pred CCCcEEEEEEEEEEEEEEECCCCcEEEEEEECCccCCCeEEEcCCCEEEEEEEcCCC---CCccccceECCCCCCCCCcc
Confidence 3567899999999998775 499999999999999999999999999999999973 35566665554445677666
Q ss_pred ccCCCCCCCCceEEEEEeCCCCcceEEecChhh----hh-ccceeeEEEcCCCCCCCCC---CCCCcceEEEEeeeecc-
Q 008799 97 ITQCPIQPGQSYVYNFTLTGQRGTLLWHAHISW----LR-ATVHGAIVILPKRSVPYPF---PKADKEKIIVFGEWWKA- 167 (553)
Q Consensus 97 ~tq~~i~pG~~~~y~~~~~~~~Gt~wYH~H~~~----~~-~Gl~G~liV~~~~~~~~~~---~~~~~e~~l~~~d~~~~- 167 (553)
++| |.||++++|+|++ +++||||||||.++ +. +||+|+|||++++....+. ..+|+|++|+++||++.
T Consensus 105 ~~~--i~pG~~~~y~f~~-~~~Gt~~yH~h~~~~~~~~~~~Gl~G~liV~~~~~~~~~~~~~~~~D~e~~l~~~D~~~~~ 181 (336)
T 1oe1_A 105 LTN--VNPGEQATLRFKA-DRSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDGLKDPQGKPLHYDRAYTIGEFDLYIPK 181 (336)
T ss_dssp GCC--BCTTEEEEEEEEC-CSCEEEEEECCCTTCHHHHHHTTCEEEEEEECTTCCBCTTSCBCCCSEEEEEEEEEECCCB
T ss_pred eEE--eCCCCEEEEEEEC-CCCeEEEEecCCCCchhHHHhCCCeEEEEEecCcCCcccccCcccCCceeEeeeeeeeecc
Confidence 665 9999999999998 78999999999874 33 8999999999875422111 14688999999999874
Q ss_pred -CHHH---------HHHHHHhCCCCCCCCceEEECCcCCCCCCCCCCCeEEEEEcCCEEEEEEEecCCCceEE-EEEcCc
Q 008799 168 -DVEA---------VINQATQMGVAPNVSDAHTINGHPGPVTNCTSQGFTLHVESGKTYLLRIVNAAVNDELF-FKIAGH 236 (553)
Q Consensus 168 -~~~~---------~~~~~~~~g~~~~~~~~~~iNG~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~-~~i~gh 236 (553)
+... .+...... .....++.++|||+.+.+.+| +.++|++|++||| +|++..+.+. +.|+||
T Consensus 182 ~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~liNG~~~~~~~~----~~l~v~~GervRl--in~~~~~~~~~~~i~gh 254 (336)
T 1oe1_A 182 GPDGKYKDYATLAESYGDTVQV-MRTLTPSHIVFNGKVGALTGA----NALTAKVGETVLL--IHSQANRDTRPHLIGGH 254 (336)
T ss_dssp CTTSSBCCCSSTGGGHHHHHHH-HHTTCCSEEEETTSTTTTSGG----GCEEEETTCEEEE--EEEESSSCBCEEETTCC
T ss_pred ccCCceeecccccccccchhhH-hhcCCCCEEEECCeeccCCCC----cceEcCCCCEEEE--EecCCCCccceEEECCc
Confidence 1110 00000000 011345899999998633212 7799999997765 5665555444 446999
Q ss_pred eEEEEeeCCCcccce--EeeEEEeCCCccEEEEEEeCCCCCeeEEEEeeccccccccCCccEEEEEEEcCCCC
Q 008799 237 NLTVVEVDSSYTKPF--KTDTIFIGPGQTTNALLTADKKIGKYLITISPFMDTIVAVNNVTGIAFLRYKGTVA 307 (553)
Q Consensus 237 ~~~via~DG~~~~p~--~~d~~~l~pgeR~dv~v~~~~~~g~~~i~~~~~~~~~~~~~~~~~~ail~y~~~~~ 307 (553)
.|+|++ ||.+++|. .++++.|+||||+||+|++++ ||.|+++|+..... ...+..++++|.+...
T Consensus 255 ~~~Vi~-DG~~~~p~~~~~dtv~i~pGer~dvlv~~~~-pG~y~~~~h~~~~~----~~~G~~~~~~V~~~~~ 321 (336)
T 1oe1_A 255 GDWVWE-TGKFANPPQRDLETWFIRGGSAGAALYTFKQ-PGVYAYLNHNLIEA----FELGAAGHIKVEGKWN 321 (336)
T ss_dssp EEEEET-TCCTTSCCEEEESBCCBCTTEEEEEEEECCS-CEEEEEEESSHHHH----HTTSCEEEEEEESCCC
T ss_pred CceEeC-CCcCcCCccccceEEEECCCCcEEEEEEcCC-CceEEEEechhhcc----ccCCCeEEEEECCCCC
Confidence 999998 99998653 478999999999999999998 79999999864221 1235678899986544
No 33
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ...
Probab=100.00 E-value=9.9e-43 Score=355.80 Aligned_cols=271 Identities=19% Similarity=0.281 Sum_probs=205.9
Q ss_pred ccccceEEEEEEEEEEEeecc--cceeeEEEECCCCCCCeEeecCCCEEEEEEEeCCCCCceeeeCCCcccCCCCCCCCC
Q 008799 18 LVESAVRHYNFTVVMTNMTKL--CASKSIVTVNGKFPGPTLHAREDDNVIVRVTNHVKYNVTIHWHGVRQLRTGWYDGPA 95 (553)
Q Consensus 18 ~~~~~~~~~~l~~~~~~~~~~--g~~~~~~~~NG~~pGP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~ 95 (553)
.+.+.+++|+|++++..++++ |..+++|+|||++|||+|++++||+|+|+|+|.+ +++||||+++......||..
T Consensus 33 ~~~~~~~~~~l~~~~~~~~~~~dg~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~---~~~~~hg~~~~~~~~~~~~~ 109 (340)
T 2bw4_A 33 KTGPRVVEFTMTIEEKKLVIDREGTEIHAMTFNGSVPGPLMVVHENDYVELRLINPD---TNTLLHNIDFHAATGALGGG 109 (340)
T ss_dssp SSSCCEEEEEEEEEEEEEECSTTCCEEEEEEETTBSSCCEEEEETTCEEEEEEEECT---TCCSCBCCEETTSCSGGGGG
T ss_pred cCCCcEEEEEEEEEEEEEEECCCCcEEEEEEECCCCCCCcEEEcCCCEEEEEEEeCC---CCCccCcceeCCcCCCCCCc
Confidence 346788999999999998864 9999999999999999999999999999999998 77999999876543344444
Q ss_pred CccCCCCCCCCceEEEEEeCCCCcceEEecChhh----hh-ccceeeEEEcCCCCCC----CCCCCCCcceEEEEeeeec
Q 008799 96 YITQCPIQPGQSYVYNFTLTGQRGTLLWHAHISW----LR-ATVHGAIVILPKRSVP----YPFPKADKEKIIVFGEWWK 166 (553)
Q Consensus 96 ~~tq~~i~pG~~~~y~~~~~~~~Gt~wYH~H~~~----~~-~Gl~G~liV~~~~~~~----~~~~~~~~e~~l~~~d~~~ 166 (553)
.++| |.||++++|+|++ .++||||||||.++ +. +||+|+|||++++... .+. .+++|++|+++||++
T Consensus 110 ~~~~--i~PG~~~~y~~~~-~~~Gt~wyH~h~~~~~~~~~~~Gl~G~~iV~~~~~~~~~~~~p~-~~d~e~~l~l~D~~~ 185 (340)
T 2bw4_A 110 ALTQ--VNPGEETTLRFKA-TKPGVFVYHCAPEGMVPWHVTSGMNGAIMVLPRDGLKDEKGQPL-TYDKIYYVGEQDFYV 185 (340)
T ss_dssp GGCC--BCTTEEEEEEEEC-CSCEEEEEECCCTTCHHHHHHTTCEEEEEEECTBCEECTTSCEE-CCSEEEEEEEEEECC
T ss_pred cceE--eCCCCEEEEEEEC-CCCeEEEEEcCCCCchhhHHhCcCEEEEEEccCcCcccccCCCc-CcceeEEEeeeeeee
Confidence 5554 9999999999998 67999999999874 44 8999999999875321 111 368899999999987
Q ss_pred c--CH---------HHHHHHHHhCCCCCCCCceEEECCcCCCCCCCCCCCeEEEEEcCCEEEEEEEecCCCceEEEEEcC
Q 008799 167 A--DV---------EAVINQATQMGVAPNVSDAHTINGHPGPVTNCTSQGFTLHVESGKTYLLRIVNAAVNDELFFKIAG 235 (553)
Q Consensus 167 ~--~~---------~~~~~~~~~~g~~~~~~~~~~iNG~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~g 235 (553)
. .. .......... .....++.++|||+.++.. ..+.+++++|+++||+++|.+...++ .++++
T Consensus 186 ~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~iNG~~~~~~----~~~~l~v~~G~r~Rl~n~~~~~~~~~-~~i~g 259 (340)
T 2bw4_A 186 PKDEAGNYKKYETPGEAYEDAVKA-MRTLTPTHIVFNGAVGALT----GDHALTAAVGERVLVVHSQANRDTRP-HLIGG 259 (340)
T ss_dssp CBCTTSCBCCCCSHHHHHHHHHHH-HHTTCCSEEEETTSTTTTS----GGGCEEEETTCEEEEEEEESSSCBCE-EEETC
T ss_pred ccccCCcccccccccccccchhhH-hhcCCCCEEEECCccCCcc----CCCceEcCCCCEEEEEECCCCCccce-EEecC
Confidence 3 11 1111100000 0113458999999986321 12779999999888777766544444 45899
Q ss_pred ceEEEEeeCCCccc-ce-EeeEEEeCCCccEEEEEEeCCCCCeeEEEEeeccccccccCCccEEEEEEEcCCCC
Q 008799 236 HNLTVVEVDSSYTK-PF-KTDTIFIGPGQTTNALLTADKKIGKYLITISPFMDTIVAVNNVTGIAFLRYKGTVA 307 (553)
Q Consensus 236 h~~~via~DG~~~~-p~-~~d~~~l~pgeR~dv~v~~~~~~g~~~i~~~~~~~~~~~~~~~~~~ail~y~~~~~ 307 (553)
|.|+|++ ||.++. |. .++++.|.||||+||+|++++ ||.|+++|+...+. ...+..++++|.+...
T Consensus 260 h~~~Vi~-dG~~~~~p~~~~dtv~l~pGer~~v~v~~~~-pG~y~~~~h~~~~h----~~~Gm~~~~~V~~~~~ 327 (340)
T 2bw4_A 260 HGDYVWA-TGKFRNPPDLDQETWLIPGGTAGAAFYTFRQ-PGVYAYVNHNLIEA----FELGAAGHFKVTGEWN 327 (340)
T ss_dssp CEEEEET-TCCTTSCCEEEESCCCBCTTEEEEEEEECCS-CEEEEEEESSHHHH----HTTSCEEEEEEESCCC
T ss_pred cceEEeC-CCcccCCccccceEEEeCCCceEEEEEECCC-CeeeEEEcCchHHH----HhCCCEEEEEECCCCc
Confidence 9999997 999874 43 589999999999999999998 79999999964211 1223467888876543
No 34
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2
Probab=100.00 E-value=1.1e-40 Score=368.21 Aligned_cols=248 Identities=18% Similarity=0.229 Sum_probs=184.7
Q ss_pred ccceEEEEEEEEEEEeecc-------------c-cee--eEEEE----------------CCCCCCCeEeecCCCEEEEE
Q 008799 20 ESAVRHYNFTVVMTNMTKL-------------C-ASK--SIVTV----------------NGKFPGPTLHAREDDNVIVR 67 (553)
Q Consensus 20 ~~~~~~~~l~~~~~~~~~~-------------g-~~~--~~~~~----------------NG~~pGP~i~v~~Gd~v~v~ 67 (553)
.+.+|+|.+-+++..+... | ..+ ....| ++++|||+|+|++||+|+|+
T Consensus 3 ~~~~r~y~i~a~e~~w~y~~~~~~~~~~~~~~~~~y~k~v~~~ytd~~f~~~~~~~~~~~~~~~pGP~I~~~~Gd~v~v~ 82 (647)
T 1sdd_B 3 TGNRKYYYIAAEEISWDYSKFVQSDDVDYVPEDTVYKKVVFRKYLDSTFTKLDPQGEYEEHLGILGPVIRAEVDDVIQVR 82 (647)
T ss_dssp CCCEEEEEEEEEEEEEETTTTC--------CCCCEEEEEEEEEESSTTCCSBCCCCSTTGGGTTSCCCEEEETTCEEEEE
T ss_pred CCCeEEEEEEEEEEEEeCCCCCcccccCccccCCeEeEEEEEEecCCcccccccCCCcccccCCcCceEEEeCCCEEEEE
Confidence 4678999999999887543 1 111 22334 34789999999999999999
Q ss_pred EEeCCCCCceeeeCCCcccCCCCCCCCCCcc--------CCCCCCCCceEEEEEeCCC-----Cc----ceEEecChhh-
Q 008799 68 VTNHVKYNVTIHWHGVRQLRTGWYDGPAYIT--------QCPIQPGQSYVYNFTLTGQ-----RG----TLLWHAHISW- 129 (553)
Q Consensus 68 l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~t--------q~~i~pG~~~~y~~~~~~~-----~G----t~wYH~H~~~- 129 (553)
|+|.|+++++|||||+++... +||+|+++ ||+|.||++++|+|+++++ +| |||||||.+.
T Consensus 83 ~~N~l~~~~siH~HGl~~~~~--~DG~~~~~~~~~~~~~~~~I~PG~~~tY~f~~~~~~gp~~~G~~c~T~wYHsH~~~~ 160 (647)
T 1sdd_B 83 FKNLASRPYSLHAHGLSYEKS--SEGKTYEDDSPEWFKEDNAIQPNKTYTYVWHATTRSGPENPGSACRAWAYYSAVNPE 160 (647)
T ss_dssp ECCCSSSCBCCEEETCC-----------------------CCBCTTCCEECCEECCTTTSCCSSSCSEEEEEEECCSSHH
T ss_pred EEECCCCceEEecCcceeCCC--CCCccccCCCCcccccCcccCCCCeEEEEEECCcccCCCCCCCCceEEEEccCCCCc
Confidence 999999999999999999754 99999887 9999999999999999554 57 9999999975
Q ss_pred -hh-ccceeeEEEcCCCCCCC--CCCCCCcceEEEEe------eeeccCHHHH-HHHHHhCCCCCCCCceEEECCcCCCC
Q 008799 130 -LR-ATVHGAIVILPKRSVPY--PFPKADKEKIIVFG------EWWKADVEAV-INQATQMGVAPNVSDAHTINGHPGPV 198 (553)
Q Consensus 130 -~~-~Gl~G~liV~~~~~~~~--~~~~~~~e~~l~~~------d~~~~~~~~~-~~~~~~~g~~~~~~~~~~iNG~~~~~ 198 (553)
|. +||+|+|||+++..... ..+..++|++|+++ ||++++.... +.. . .......++.++|||+.++.
T Consensus 161 ~q~~~GL~G~lIV~~~~~~~~~~~~~~~~~e~~l~l~~~d~~~~w~~~~~~~~~~~~-~-~~~~~~~~~~~~iNG~~~~~ 238 (647)
T 1sdd_B 161 KDIHSGLIGPLLICRKGTLDKETNMPVDMREFVLLFMVFDEKKSWYYDKKPTRSWRR-A-SSEVKNSHEFHAINGMIYNL 238 (647)
T ss_dssp HHHTTTCEEEEEEECTTSSCTTSCCCSSCCEEEEEEEEEEGGGSSCCC-----------------CCCEEEEETTBSSCC
T ss_pred ccccccCccCEEEeeCCCcccccCCCCcceeEEEEEEeecCccccccccCccccccc-C-CcchhhcCceeccCCEecCC
Confidence 33 89999999999864321 12234689999999 6777654321 110 0 00112346899999997522
Q ss_pred CCCCCCCeEEEEEcCCEEEEEEEecCCCc-eEEEEEcCceEEEEeeCCCcccceEeeEEEeCCCccEEEEEEeCCCCCee
Q 008799 199 TNCTSQGFTLHVESGKTYLLRIVNAAVND-ELFFKIAGHNLTVVEVDSSYTKPFKTDTIFIGPGQTTNALLTADKKIGKY 277 (553)
Q Consensus 199 ~~~~~~~~~~~v~~G~~~rlRliN~~~~~-~~~~~i~gh~~~via~DG~~~~p~~~d~~~l~pgeR~dv~v~~~~~~g~~ 277 (553)
|.+++++|++|||||+|++... .+.||+|||.|++++.|| ..+|++.|.||||+||+|++++ ||.|
T Consensus 239 -------p~l~v~~G~~vrlrliN~~~~~~~h~~hlhG~~f~vi~~d~-----~~~d~v~l~pg~r~~v~~~~~~-pG~w 305 (647)
T 1sdd_B 239 -------PGLRMYEQEWVRLHLLNLGGSRDIHVVHFHGQTLLENGTQQ-----HQLGVWPLLPGSFKTLEMKASK-PGWW 305 (647)
T ss_dssp -------CCCEEETTCEEEEEEEECCCTTCCEEEEETTCCEEECSSSC-----EEESSEEECTTEEEEEEEECCS-SEEE
T ss_pred -------CCeEEcCCCEEEEEEEeCCCCCcceeEEEcCcEEEEecCCC-----cccceEEECCCeEEEEEEEecc-ceEe
Confidence 7799999999999999999764 788999999999999885 4789999999999999999998 7999
Q ss_pred EEEEeec
Q 008799 278 LITISPF 284 (553)
Q Consensus 278 ~i~~~~~ 284 (553)
+++||..
T Consensus 306 ~~hch~~ 312 (647)
T 1sdd_B 306 LLDTEVG 312 (647)
T ss_dssp EEECCCH
T ss_pred ecccCcc
Confidence 9999963
No 35
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3
Probab=100.00 E-value=1.7e-41 Score=340.58 Aligned_cols=213 Identities=18% Similarity=0.256 Sum_probs=158.0
Q ss_pred eEEEECCCCCCCeEeecCCCEEEEEEEeCCCCCceeeeCCCcccCCCCCCCCCC------cc--CCCCCCCCceEEEEEe
Q 008799 43 SIVTVNGKFPGPTLHAREDDNVIVRVTNHVKYNVTIHWHGVRQLRTGWYDGPAY------IT--QCPIQPGQSYVYNFTL 114 (553)
Q Consensus 43 ~~~~~NG~~pGP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~------~t--q~~i~pG~~~~y~~~~ 114 (553)
..+++| ++|||+|+|++||+|+|+|+|.++++++|||||++.... +||+|. ++ ||+|.||++++|+|++
T Consensus 50 ~~~~~n-~~pGP~I~v~~Gd~v~v~~~N~l~~~~siH~HGl~~~~~--~dG~~~~dg~~~~~~~~~~I~PG~~~~Y~f~~ 126 (306)
T 1sdd_A 50 PQSRTS-GLLGPTLYAEVGDIMKVHFKNKAHKPLSIHAQGIKYSKF--SEGASYSDHTLPMEKMDDAVAPGQEYTYEWII 126 (306)
T ss_dssp CCCSSC-CSCCCCEEEETTCEEEEEEEECSSSCBCCEEESSCCCTT--TSCCCSCCCCCHHHHTTTCBCTTCEEEEEEEC
T ss_pred cccccC-CccCCEEEEeCCCEEEEEEEECCCCcccEeecceecccc--cCCCccCCCCcccccCCCccCCCCeEEEEEEe
Confidence 445678 689999999999999999999999999999999996543 566554 33 7999999999999999
Q ss_pred CCC---------CcceEEecChhh--hh-ccceeeEEEcCCCCCCC-CC-CCCCcceEEEEeeeeccCHHHHHHHHHhCC
Q 008799 115 TGQ---------RGTLLWHAHISW--LR-ATVHGAIVILPKRSVPY-PF-PKADKEKIIVFGEWWKADVEAVINQATQMG 180 (553)
Q Consensus 115 ~~~---------~Gt~wYH~H~~~--~~-~Gl~G~liV~~~~~~~~-~~-~~~~~e~~l~~~d~~~~~~~~~~~~~~~~g 180 (553)
+++ +||||||||... +. +||+|+|||+++..... +. ...++|++|+++||.... ..
T Consensus 127 ~~~~gp~~~d~~~GT~wYHsH~~~~~q~~~GL~G~liV~~~~~~~~~~~~~~~d~e~~l~~~d~d~~~---------~~- 196 (306)
T 1sdd_A 127 SEHSGPTHDDPPCLTHIYYSYVNLVEDFNSGLIGPLLICKKGTLTEDGTQKMFEKQHVLMFAVFDESK---------SW- 196 (306)
T ss_dssp CGGGSCCSSSCSEEEEEEECCSSSHHHHHTTCCEEEEEECTTCBCTTSSBSSSCCCCCCBCCEEETTS---------SS-
T ss_pred CCccCCCCCCCCceEEEEeccCCchhhhccCceEEEEEccCCCCCccCCcCcccceEEEEEEeccccc---------cc-
Confidence 544 379999999876 43 89999999998753211 11 135789999999984321 00
Q ss_pred CCCCCCceEEECCcCCCCCCCCCCCeEEEEEcCCEEEEEEEecCCC-ceEEEEEcCceEEEEeeCCCcccceEeeEEEeC
Q 008799 181 VAPNVSDAHTINGHPGPVTNCTSQGFTLHVESGKTYLLRIVNAAVN-DELFFKIAGHNLTVVEVDSSYTKPFKTDTIFIG 259 (553)
Q Consensus 181 ~~~~~~~~~~iNG~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~-~~~~~~i~gh~~~via~DG~~~~p~~~d~~~l~ 259 (553)
....++.++|||+.++. .|.+++++|+++||||+|+++. ..+.||||||.|++ || ..+|++.|.
T Consensus 197 -~~~~~~~~~ING~~~~~------~p~l~v~~G~~vrlrliN~g~~~~~h~~hlhG~~~~~---dG-----~~~dtv~l~ 261 (306)
T 1sdd_A 197 -NQTSSLMYTVNGYVNGT------MPDITVCAHDHISWHLIGMSSGPELFSIHFNGQVLEQ---NH-----HKISAITLV 261 (306)
T ss_dssp -SCCCCEEECSSSCCSSC------CCCCCCCCC------BBCCCSSSCEECCBCSSTTCEE---TT-----EECSCCCEE
T ss_pred -ccCCCcceeeCCEecCC------CcceEEcCCCEEEEEEEeCCCCCccEEEEECCcEeee---CC-----EEcceEEEC
Confidence 11235789999997522 1679999999999999999987 56779999999985 77 358999999
Q ss_pred CCccEEEEEEeCCCCCeeEEEEeec
Q 008799 260 PGQTTNALLTADKKIGKYLITISPF 284 (553)
Q Consensus 260 pgeR~dv~v~~~~~~g~~~i~~~~~ 284 (553)
||||+||++++++ ||.|+++|+..
T Consensus 262 pger~~v~~~~~~-pG~~~~hch~~ 285 (306)
T 1sdd_A 262 SATSTTANMTVSP-EGRWTIASLIP 285 (306)
T ss_dssp TTCCBC---------CCCCCBCCST
T ss_pred CCcEEEEEEEcCC-CeEEEEEeCCh
Confidence 9999999999987 79999999954
No 36
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans}
Probab=100.00 E-value=1.1e-38 Score=338.22 Aligned_cols=259 Identities=22% Similarity=0.308 Sum_probs=209.1
Q ss_pred cceEEEEEEEEEEEeec-ccceeeEEEECCCCCCCeEeecCCCEEEEEEEeCCC--CCceeeeCCCcccCCCCCCCCCCc
Q 008799 21 SAVRHYNFTVVMTNMTK-LCASKSIVTVNGKFPGPTLHAREDDNVIVRVTNHVK--YNVTIHWHGVRQLRTGWYDGPAYI 97 (553)
Q Consensus 21 ~~~~~~~l~~~~~~~~~-~g~~~~~~~~NG~~pGP~i~v~~Gd~v~v~l~N~l~--~~~~iH~HG~~~~~~~~~DGv~~~ 97 (553)
+..++|+|++++....+ +|....+|+|||++|||+|++++||+++|||+|.+. ..++|||||+.. +||+|..
T Consensus 161 ~~~~~~~l~~~~~~~~~~~g~~~~~~~~NG~~pgp~i~v~~G~~v~~rl~N~~~~~~~~~ih~Hg~~~-----~DG~~~~ 235 (447)
T 2dv6_A 161 AKTVRIDLETVEVKGQLDDNTTYTYWTFNGKVPGPFLRVRVGDTVELHLKNHKDSLMVHSVDFHGATG-----PGGAAAF 235 (447)
T ss_dssp CCEEEEEEEEEEEEEEEETTEEEEEEEETTBBSCCCEEEETTCEEEEEEEECTTCSSCBCCEETTCCS-----GGGGGGG
T ss_pred CcEEEEEEEEEEEEEeccCCceeEEEEECCccCCCeEEecCCCEEEEEEEeCCCCceeEEEeeccccC-----CCCCCcc
Confidence 45678888887777766 588899999999999999999999999999999985 679999999852 7998865
Q ss_pred cCCCCCCCCceEEEEEeCCCCcceEEecChh---hhh-ccceeeEEEcCCCCCCCCCCCCCcceEEEEeeeeccCHHH--
Q 008799 98 TQCPIQPGQSYVYNFTLTGQRGTLLWHAHIS---WLR-ATVHGAIVILPKRSVPYPFPKADKEKIIVFGEWWKADVEA-- 171 (553)
Q Consensus 98 tq~~i~pG~~~~y~~~~~~~~Gt~wYH~H~~---~~~-~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~-- 171 (553)
++ |.||++++|.|++ +++||||||||.+ .+. +||+|+|+|+++.. ++..++|++++++||+......
T Consensus 236 ~~--i~pG~~~~~~~~~-~~~G~~~yh~h~~~~~~~~~~Gl~g~l~v~~~~~----~P~~d~~~~~~~~~~~~~~~~~~~ 308 (447)
T 2dv6_A 236 TQ--TDPGEETVVTFKA-LIPGIYVYHCATPSVPTHITNGMYGLLLVEPEGG----LPQVDREFYVMQGEIYTVKSFGTS 308 (447)
T ss_dssp CC--BCTTCEEEEEEEC-CSCEEEEEECCSSSHHHHHHTTCEEEEEEECTTC----SCCCSEEEEEEEEEECBSSCTTCC
T ss_pred EE--eCCCCEEEEEEEC-CCCeEEEEEeCCCChHHHHhCCCEEEEEEeCCCC----CCCCCeeEEEEecccccCCccccc
Confidence 53 9999999999998 6789999999974 233 89999999997653 2346889999999998753210
Q ss_pred -----HHHHHHhCCCCCCCCceEEECCcCCCCCCCCCCCeEEEEEcCCEEEEEEEecCCCceEEEEEcCceEEEEeeCCC
Q 008799 172 -----VINQATQMGVAPNVSDAHTINGHPGPVTNCTSQGFTLHVESGKTYLLRIVNAAVNDELFFKIAGHNLTVVEVDSS 246 (553)
Q Consensus 172 -----~~~~~~~~g~~~~~~~~~~iNG~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~ 246 (553)
...... + ..++.++|||+.+++..+ +.+++++|++|||||+|++....+.||||||.|+||+.||.
T Consensus 309 g~~~~~~~~~~--~---~~~~~~~iNG~~~~~~~~----~~~~v~~g~~vrlrliN~~~~~~h~~hlhGh~f~vv~~dG~ 379 (447)
T 2dv6_A 309 GEQEMDYEKLI--N---EKPEYFLFNGSVGSLTRS----HPLYASVGETVRIFFGVGGPNFTSSFHVIGEIFDHVYSLGS 379 (447)
T ss_dssp EECCBBHHHHH--T---TCCSEEEETTSTTCCCCC----CCEEECTTCEEEEEEEEEESSCCEEEEEETCCEEEECGGGC
T ss_pred ccccCChHHhh--c---cCCCEEEECCcccCCCCC----cceEECCCCEEEEEEEeCCCCceEeEEEcCcEEEEEEcCCc
Confidence 011111 1 235789999998743211 46999999999999999998788889999999999999999
Q ss_pred cccc-e-EeeEEEeCCCccEEEEEEeCCCCCeeEEEEeeccccccccCCccEEEEEEEcCCC
Q 008799 247 YTKP-F-KTDTIFIGPGQTTNALLTADKKIGKYLITISPFMDTIVAVNNVTGIAFLRYKGTV 306 (553)
Q Consensus 247 ~~~p-~-~~d~~~l~pgeR~dv~v~~~~~~g~~~i~~~~~~~~~~~~~~~~~~ail~y~~~~ 306 (553)
++.| . .+|++.|.||||++|+|++++ ||.|+++|+..... ..+..++++|.+..
T Consensus 380 ~~~~p~~~~dtv~l~pg~r~~i~~~~~~-pG~~~~hch~~~h~-----~~Gm~~~~~v~~~~ 435 (447)
T 2dv6_A 380 VVSPPLIGVQTVSVPPGGATIVDFKIDR-AGRYILVDHALSRL-----EHGLVGFLNVDGPK 435 (447)
T ss_dssp SSSCCEEEESEEEECTTEEEEEEEECCS-CEEEEEEESSGGGG-----GGTCCEEEEECSCS
T ss_pred ccCCCcccccEEEECCCcEEEEEEECCC-CEEEEEEecCcCcc-----ccCCEEEEEEeCCC
Confidence 9854 4 589999999999999999997 79999999965331 22447888997654
No 37
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B*
Probab=100.00 E-value=4.1e-40 Score=365.61 Aligned_cols=248 Identities=14% Similarity=0.155 Sum_probs=194.2
Q ss_pred ccceEEEEEEEEEEEe--ecccc---------------eee--EEEE-CC---------------CCCCCeEeecCCCEE
Q 008799 20 ESAVRHYNFTVVMTNM--TKLCA---------------SKS--IVTV-NG---------------KFPGPTLHAREDDNV 64 (553)
Q Consensus 20 ~~~~~~~~l~~~~~~~--~~~g~---------------~~~--~~~~-NG---------------~~pGP~i~v~~Gd~v 64 (553)
.+.+|+|.|.+++..+ ++++. .++ ++.| |+ ++|||+||+++||+|
T Consensus 130 ~g~~r~y~i~a~e~~wdyap~~~~~~~~~~~~~~~g~~y~k~~~~~y~~~~f~~~~~~~~~~~~l~~pGP~Ir~~~GD~v 209 (770)
T 2r7e_B 130 QKKTRHYFIAAVERLWDYGMSSSPHVLRNRAQSGSVPQFKKVVFQEFTDGSFTQPLYRGELNEHLGLLGPYIRAEVEDNI 209 (770)
T ss_dssp CCCCEEEEEEEEECCCCCCSCCCCTTTTSSCCCCCCCCCCCEEEEECSSSCTTTTCCCCSTTTTCCSCCCCCCCCSSSCE
T ss_pred CCCEEEEEEEEEEEEEeecCCCcccccccccccccccceeeEEEEEeccCceeccccccccccccCCCCCeEEEEcCCEE
Confidence 5789999999999885 44442 122 2333 33 589999999999999
Q ss_pred EEEEEeCCCCCceeeeCCCcccCCCCCCCCCCccCCCCCCCCceEEEEEeCC---------CCcceEEecChhhh--h-c
Q 008799 65 IVRVTNHVKYNVTIHWHGVRQLRTGWYDGPAYITQCPIQPGQSYVYNFTLTG---------QRGTLLWHAHISWL--R-A 132 (553)
Q Consensus 65 ~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~pG~~~~y~~~~~~---------~~Gt~wYH~H~~~~--~-~ 132 (553)
+|+|+|.++++++|||||+++..... ||+++ +||+|+||++|+|+|++.+ ++||||||||.+.+ . +
T Consensus 210 ~v~~~N~l~~~~siH~HG~~~~~~~~-dG~~~-~~~~I~PG~~~tY~f~~~~~~gp~~~d~~~Gt~wYHsh~~~~~q~~~ 287 (770)
T 2r7e_B 210 MVTFRNQASRPYSFYSSLISYEEDQR-QGAEP-RKNFVKPNETKTYFWKVQHHMAPTKDEFDCKAWAYSSDVDLEKDVHS 287 (770)
T ss_dssp EEEEECCSSSCCCCCBTTCCCCCCSS-SCTTT-TSSCCCSSCEEEEECCCCSSSSCCSSCCSEEEEEECCCSSSSHHHHT
T ss_pred EEEEEECCCCCcceeecccccccccC-CCCcC-ccCccCCCCeEEEEEEecCccCCccCCCCCeeEEeeccCCcHHHHhC
Confidence 99999999999999999999988742 59998 8999999999999999854 89999999999874 3 8
Q ss_pred cceeeEEEcCCCCCCCC--CCCCCcceEEEEee------eeccCHHHHHHHHHh-CC----CC---CCCCceEEECCcCC
Q 008799 133 TVHGAIVILPKRSVPYP--FPKADKEKIIVFGE------WWKADVEAVINQATQ-MG----VA---PNVSDAHTINGHPG 196 (553)
Q Consensus 133 Gl~G~liV~~~~~~~~~--~~~~~~e~~l~~~d------~~~~~~~~~~~~~~~-~g----~~---~~~~~~~~iNG~~~ 196 (553)
||+|+|||+++...... ....++|++|++++ |+.+..... ... .. .. ....+.++|||+..
T Consensus 288 GL~G~liV~~~~~~~~~~~~~~~d~E~vl~~~~~de~~swy~~~~~~~---~~~~p~~~~~~d~~~~~~~~~~~ING~~~ 364 (770)
T 2r7e_B 288 GLIGPLLVCHTNTLNPAHGRQVTVQEFALFFTIFDETKSWYFTENMER---NCRAPCNIQMEDPTFKENYRFHAINGYIM 364 (770)
T ss_dssp SCCEEEEEECSTTSCSSSCCCCSSEEEECCCCEECCSSSSCTTGGGSS---CSCCSSCCCSSSSSSTTTSCEECTTSCTT
T ss_pred CceeeEEECCCcccccccCCCccceEEEEEEeecCccccchhccchhh---cccCccccccCCccccccCCccccCCccC
Confidence 99999999998643211 12357899988754 444322110 000 00 00 01235789999975
Q ss_pred CCCCCCCCCeEEEEEcCCEEEEEEEecCCCc-eEEEEEcCceEEEEeeCCCcccceEeeEEEeCCCccEEEEEEeCCCCC
Q 008799 197 PVTNCTSQGFTLHVESGKTYLLRIVNAAVND-ELFFKIAGHNLTVVEVDSSYTKPFKTDTIFIGPGQTTNALLTADKKIG 275 (553)
Q Consensus 197 ~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~-~~~~~i~gh~~~via~DG~~~~p~~~d~~~l~pgeR~dv~v~~~~~~g 275 (553)
.. .+.+++++|++|||||+|++... .+.||||||.|+|++.||. .+|++.|.||||++|+|++++ ||
T Consensus 365 ~~------~~~l~v~~Ge~vr~rliN~g~~~~~H~fHlhGh~f~Vv~~dg~-----~~Dtv~l~Pg~~~~v~~~ad~-pG 432 (770)
T 2r7e_B 365 DT------LPGLVMAQDQRIRWYLLSMGSNENIHSIHFSGHVFTVRKKEEY-----KMALYNLYPGVFETVEMLPSK-AG 432 (770)
T ss_dssp TT------CCCCCCCSSSCEEEECCCCCSSSCCCEEEBSSCCEECCSSSCC-----EESEEECCTTCCCEEEECCSS-CB
T ss_pred CC------CCCeEEeCCCEEEEEEEeCCCCcceEEEEEcCCEEEEEecCCc-----eeeEEEECCCeEEEEEEEeCC-CC
Confidence 21 26789999999999999998653 6789999999999999973 789999999999999999997 79
Q ss_pred eeEEEEeec
Q 008799 276 KYLITISPF 284 (553)
Q Consensus 276 ~~~i~~~~~ 284 (553)
.|+++||..
T Consensus 433 ~w~~hcH~~ 441 (770)
T 2r7e_B 433 IWRVECLIG 441 (770)
T ss_dssp CCCBCCCSH
T ss_pred ceEEEeccc
Confidence 999999953
No 38
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A*
Probab=100.00 E-value=4.3e-37 Score=340.96 Aligned_cols=216 Identities=21% Similarity=0.285 Sum_probs=168.8
Q ss_pred CCCCCeEeecCCCEEEEEEEeCCCCCceeeeCCCcccCCCCCC-----CCCCccCCCCCCCCceEEEEEeCCCCc-----
Q 008799 50 KFPGPTLHAREDDNVIVRVTNHVKYNVTIHWHGVRQLRTGWYD-----GPAYITQCPIQPGQSYVYNFTLTGQRG----- 119 (553)
Q Consensus 50 ~~pGP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~D-----Gv~~~tq~~i~pG~~~~y~~~~~~~~G----- 119 (553)
.+|||+||+++||+|+|+|+|.++++++|||||+.+. .+|+| |+++++||+|.||++|+|+|++++++|
T Consensus 448 g~pGP~Ir~~~GD~v~v~~~N~l~~~~siHwHGl~~~-~~~~DG~~~~G~~~~~~~~I~PG~t~tY~f~~~~~agPg~~d 526 (742)
T 2r7e_A 448 GILGPLLYGEVGDTLLIIFKNQASRPYNIYPHGITDV-RPLYSRRLPKGVKHLKDFPILPGEIFKYKWTVTVEDGPTKSD 526 (742)
T ss_dssp CSCCCCCCCBTTCEEECCEECCSSSCBCCEETTCSEE-CCTTCSCCSSSCSSTTTSCCBSSCEECCEEECCSTTSCCSSS
T ss_pred CCCCCeEEEECCCEEEEEEEeCCCCCcCEEecccccC-CcccccccCCCCcccccccCCCCCeEEEEEEeccccCCcccC
Confidence 5799999999999999999999999999999999984 45565 567788999999999999999965544
Q ss_pred ----ceEEecChhhhh---ccceeeEEEcCCCCCC-CC-CCCCCcceEEEEee------eeccCHHHHHHHHHhCC--CC
Q 008799 120 ----TLLWHAHISWLR---ATVHGAIVILPKRSVP-YP-FPKADKEKIIVFGE------WWKADVEAVINQATQMG--VA 182 (553)
Q Consensus 120 ----t~wYH~H~~~~~---~Gl~G~liV~~~~~~~-~~-~~~~~~e~~l~~~d------~~~~~~~~~~~~~~~~g--~~ 182 (553)
|||||||.+.+. +||+|+|||+++.... .. ....|+|++|++++ |+....... +.... ..
T Consensus 527 ~~~gT~wYHsH~~~~~q~~~GL~G~lIV~~~~~~~~~~~~~~~d~E~~l~~~~fde~~~wy~~~~~~~---~~~~p~~v~ 603 (742)
T 2r7e_A 527 PRCLTRYYSSFVNMERDLASGLIGPLLICYKESVDQRGNQIMSDKRNVILFSVFDENRSWYLTENIQR---FLPNPAGVQ 603 (742)
T ss_dssp CSCCCCEEECCSSSSSTGGGSCCEECCCBCCCSCCCCCCSSCCSCCCEEEECBCCGGGSSCSHHHHHH---HSSSSSCSC
T ss_pred CCceEEEEecCcchhhhhhccceeeEEEcCccccccccCcCCCCceEEEEeeccccccccccccchhh---cccCchhcc
Confidence 999999998753 8999999999875321 11 12458899999965 444322111 11000 00
Q ss_pred ------CCCCceEEECCcCCCCCCCCCCCeEEEEEcCCEEEEEEEecCCC-ceEEEEEcCceEEEEeeCCCcccceEeeE
Q 008799 183 ------PNVSDAHTINGHPGPVTNCTSQGFTLHVESGKTYLLRIVNAAVN-DELFFKIAGHNLTVVEVDSSYTKPFKTDT 255 (553)
Q Consensus 183 ------~~~~~~~~iNG~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~-~~~~~~i~gh~~~via~DG~~~~p~~~d~ 255 (553)
......++|||+.... ..+.+++|++|||||+|+|+. ..+.||||||+|+|+ +..+|+
T Consensus 604 ~~~~~~~~~~~~~~ING~~~~~-------~~l~v~~Ge~vr~rliN~g~~~~~h~~HlhGh~f~v~--------~~~~Dt 668 (742)
T 2r7e_A 604 LEDPEFQASNIMHSINGYVFDS-------LQLSVCLHEVAYWYILSIGAQTDFLSVFFSGYTFKHK--------MVYEDT 668 (742)
T ss_dssp CCCHHHHGGGCCBCTTTTCSSC-------CCCCCCSSCCCEEEEEECSSCCCCCCCEESSSCCCCB--------SSSBCS
T ss_pred cccccccccCceeeecCcCCCC-------CcEEEeCCCEEEEEEEeCCCCcceEEEEEcCcEEEEe--------ccceeE
Confidence 0011357899997521 238999999999999998764 457899999999986 578899
Q ss_pred EEeCCCccEEEEEEeCCCCCeeEEEEeecc
Q 008799 256 IFIGPGQTTNALLTADKKIGKYLITISPFM 285 (553)
Q Consensus 256 ~~l~pgeR~dv~v~~~~~~g~~~i~~~~~~ 285 (553)
+.|.||||++|+|++++ ||.|+++||...
T Consensus 669 v~l~Pg~~~~v~~~ad~-pG~w~~hcH~~~ 697 (742)
T 2r7e_A 669 LTLFPFSGETVFMSMEN-PGLWILGCHNSD 697 (742)
T ss_dssp SCCCCCSSEECCEECCC-CCCSCCEECCCS
T ss_pred EEECCCcEEEEEEEcCC-CeEEEEEeCCch
Confidence 99999999999999997 799999999653
No 39
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP}
Probab=99.96 E-value=3.8e-29 Score=248.64 Aligned_cols=233 Identities=18% Similarity=0.164 Sum_probs=161.9
Q ss_pred CceEEECCcCCCCCCCCCCCeEEEEEcCCEEEEEEEecCCCceEEEEEcCceEEEEeeCCCcccceEeeEEEeCCCccEE
Q 008799 186 SDAHTINGHPGPVTNCTSQGFTLHVESGKTYLLRIVNAAVNDELFFKIAGHNLTVVEVDSSYTKPFKTDTIFIGPGQTTN 265 (553)
Q Consensus 186 ~~~~~iNG~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~~p~~~d~~~l~pgeR~d 265 (553)
...|++||+.. . |+|+++.|+++++|+.|.... .+.+|+||.. ..+.||.+. .+...|.||++++
T Consensus 54 ~~~~~~ng~~p-g-------P~i~~~~Gd~v~v~~~N~~~~-~~~iH~HG~~--~~~~DG~p~----~~~~~i~PG~~~~ 118 (288)
T 3gdc_A 54 FKGWSYNGRIP-G-------PTLWAREGDALRIHFTNAGAH-PHTIHFHGVH--RATMDGTPG----IGAGSIAPGQSFT 118 (288)
T ss_dssp EEEEEETTBSS-C-------CEEEEETTCEEEEEEEECSSS-CBCCEESSCC--CGGGSCCTT----STTCSBCTTCEEE
T ss_pred EEEEEECCccC-C-------CcEEEeCCCEEEEEEEeCCCC-cccEEecccc--ccccCCCCC----ccceeECCCCEEE
Confidence 36899999852 1 899999999999999999864 4569999976 457899753 2345789999999
Q ss_pred EEEEeCCCCCeeEEEEeeccccccccCCccEEEEEEEcCCCCCCCCccCCCCCCCCcccccccccccccccCCCCCCCCC
Q 008799 266 ALLTADKKIGKYLITISPFMDTIVAVNNVTGIAFLRYKGTVAFSSTTLTNVPAINATEVTNTFSDNLRSLNSKRYPAKVP 345 (553)
Q Consensus 266 v~v~~~~~~g~~~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~~~p~~~p 345 (553)
..+++++ +|.||++||........... ..+.+....... .+
T Consensus 119 y~f~~~~-~Gt~~yH~H~~~~~~~~~~G--l~G~liV~~~~~--------~~---------------------------- 159 (288)
T 3gdc_A 119 YEFDATP-FGTHLYHCHQSPLAPHIAKG--LYGGFIVEPKEG--------RP---------------------------- 159 (288)
T ss_dssp EEEECCS-CEEEEEECCCSSHHHHHHTT--CEEEEEEECSSC--------CC----------------------------
T ss_pred EEEEcCC-CccEEEEecCcchHHHHhCc--CeEEEEEeCCcc--------CC----------------------------
Confidence 9999975 79999999953210001122 223333321100 00
Q ss_pred CCcceEEEEEeee-eccCCccCCCC-ceeeEeeeceeeecCCchhhhhhhccccccccCCCCCCCCeeeccCCCCCCccc
Q 008799 346 LTVDHSLLLTMAV-AVNPCATCPNG-TKVGAAMNNISFVMPTTALLQAHYYKISGVFTDDFPAKPPIAFNYTGNYTGTLQ 423 (553)
Q Consensus 346 ~~~d~~~~~~~~~-~~~~~~~~~~~-~~~~~~~n~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 423 (553)
..++++.+.+.- ... ++ ..-.|++||+.|..
T Consensus 160 -~~d~e~~l~~~d~~~~------~g~~~~~~~iNG~~~~~---------------------------------------- 192 (288)
T 3gdc_A 160 -PADDEMVMVMNGYNTD------GGDDNEFYSVNGLPFHF---------------------------------------- 192 (288)
T ss_dssp -CCSEEEEEEEEEECCS------STTCCSEEEETTSTTHH----------------------------------------
T ss_pred -CCcceEEEEEeeEecC------CCCCcceEEECcccccc----------------------------------------
Confidence 023333332211 100 00 01135666654310
Q ss_pred cCCCeeEEEecCCCEEEEEEEcCCCCCCCCCCeeecCCceEEEeeCCCCCCCCCCCCCCCCCCCCcceeeEecCCcEEEE
Q 008799 424 TTNGTRLYRLAYNSTVQLVLQGTTVIAPENHPTHLHGFNFFAVGKGSGNFDPNKDPQKFNLVDPVERNTISVPTAGWTAI 503 (553)
Q Consensus 424 ~~~~~~~~~~~~g~~v~~~i~n~~~~~~~~HP~HlHG~~f~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~i 503 (553)
....+.++.|++|+|.+.|.+. .++.||||+||+.|+|++.+.. +..|.++||+.|+|+++..|
T Consensus 193 ---~~~~l~v~~Ge~vr~~l~N~g~-~~~~H~fHlhG~~f~v~~~g~~------------~~~~~~~Dtv~v~pg~~~~v 256 (288)
T 3gdc_A 193 ---MDFPVKVKQHELVRIHLINVLE-YDPINSFHIHGNFFHYYPTGTM------------LTPSEYTDTISQVQGQRGIL 256 (288)
T ss_dssp ---HHSCEEEETTCCEEEEEEECCC-SSSEEEEEETTCCEEEEETTCC------------SSCSEEESEEEEETTCEEEE
T ss_pred ---cCcccccCCCCEEEEEEEeCCC-CCcceeEEEcCCEEEEEcCCCc------------cCCCceeeEEEeCCCceEEE
Confidence 0112577899999999999651 1246999999999999986421 23458999999999999999
Q ss_pred EEEecCceeeEEeecchhhHhccceEEEEEeC
Q 008799 504 RFRADNPGVWFLHCHLEVHTSWGLKMAFVVDN 535 (553)
Q Consensus 504 rf~adnpG~w~~HCHil~H~d~GM~~~~~V~~ 535 (553)
+|++++||.|+||||+++|++.|||..|+|.+
T Consensus 257 ~~~~~~pG~~~~hCH~~~H~~~GM~~~~~V~~ 288 (288)
T 3gdc_A 257 ELRFPYPGKFMFHAHKTEFAELGWMGFFEVSA 288 (288)
T ss_dssp EECCCSCEEEEEECSSHHHHTTTCEEEEEEEC
T ss_pred EEECCCCEEEEEEecChHHHhcCCCEEEEEeC
Confidence 99999999999999999999999999999863
No 40
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea}
Probab=99.95 E-value=9.9e-28 Score=241.36 Aligned_cols=243 Identities=19% Similarity=0.217 Sum_probs=161.3
Q ss_pred ceEEECCcCCCCCCCCCCCeEEEEEcCCEEEEEEEecCCCceEEEEEcCceEEE-EeeCCCcccceEeeEEEeCCCccEE
Q 008799 187 DAHTINGHPGPVTNCTSQGFTLHVESGKTYLLRIVNAAVNDELFFKIAGHNLTV-VEVDSSYTKPFKTDTIFIGPGQTTN 265 (553)
Q Consensus 187 ~~~~iNG~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~v-ia~DG~~~~p~~~d~~~l~pgeR~d 265 (553)
..+++||+.- . |+|+++.|+++++|+.|... ....+|+||....- .+.||.+. +....|.||++++
T Consensus 23 ~~~~~ng~~p-G-------P~i~~~~Gd~v~v~~~N~l~-~~~siH~HG~~~~~~~~~DG~p~----~t~~~i~PG~~~~ 89 (318)
T 3g5w_A 23 HTFAFNGQVP-A-------PLIHVMEGDDVTVNVTNMTT-LPHTIHWHGMLQRGTWQSDGVPH----ATQHAIEPGDTFT 89 (318)
T ss_dssp EEEEETTBSS-C-------CEEEEETTCEEEEEEEECSS-SCBCCEEETCCCTTCGGGSCCBT----TTBCCBCTTCEEE
T ss_pred EEEEECCccC-C-------ceEEEeCCCEEEEEEEeCCC-CceeEEecCcCCCCCcccCCCcc----cccccCCCCCEEE
Confidence 6899999841 1 99999999999999999985 45669999986542 36788753 2235789999999
Q ss_pred EEEEeCCCCCeeEEEEeeccccccccCCccEEEEEEEcCCCCCCCCccCCCCCCCCcccccccccccccccCCCCCCCCC
Q 008799 266 ALLTADKKIGKYLITISPFMDTIVAVNNVTGIAFLRYKGTVAFSSTTLTNVPAINATEVTNTFSDNLRSLNSKRYPAKVP 345 (553)
Q Consensus 266 v~v~~~~~~g~~~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~~~p~~~p 345 (553)
..+++++ +|+||+++|........... ..+.|......... .+
T Consensus 90 y~f~~~~-~Gt~wYH~H~~~~~~~~~~G--l~G~lIV~~~~~~~------~~---------------------------- 132 (318)
T 3g5w_A 90 YKFKAEP-AGTMWYHCHVNVNEHVTMRG--MWGPLIVEPKNPLP------IE---------------------------- 132 (318)
T ss_dssp EEEECCS-CEEEEEECCSSHHHHHHHSC--CEEEEEEECSSCCH------HH----------------------------
T ss_pred EEEEcCC-CEEEEEEccCChhhhhccCC--CEEEEEEcCCCccc------cc----------------------------
Confidence 9999986 79999999952111000122 22233332211000 00
Q ss_pred CCcceEEEEEeee-eccCCc-----cCCCCceeeEeeeceeeecCCchhhhhhhccccccccCCCCCCCCeeeccCCCCC
Q 008799 346 LTVDHSLLLTMAV-AVNPCA-----TCPNGTKVGAAMNNISFVMPTTALLQAHYYKISGVFTDDFPAKPPIAFNYTGNYT 419 (553)
Q Consensus 346 ~~~d~~~~~~~~~-~~~~~~-----~~~~~~~~~~~~n~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 419 (553)
...++++.+.+.- ...... .......-.|.+||+.|
T Consensus 133 ~~~d~e~~l~l~dw~~~~~~~~~~~~~~~~~~d~~~ING~~~-------------------------------------- 174 (318)
T 3g5w_A 133 KTVTKDYILMLSDWVSSWANKPGEGGIPGDVFDYYTINAKSF-------------------------------------- 174 (318)
T ss_dssp HTCCEEEEEEEEEECGGGTTCTTCCCCTTCCCCEEEETTBCB--------------------------------------
T ss_pred ccccceeEEEEEeeccccccccccCCCCCCcCcEEEEcCcCC--------------------------------------
Confidence 0012222211110 000000 00000001244555432
Q ss_pred CccccCCCeeEEEecCCCEEEEEEEcCCCCCCCCCCeeecCCceEEEeeCCCCCCCCCCCCCCCCCCCCcceeeEecCCc
Q 008799 420 GTLQTTNGTRLYRLAYNSTVQLVLQGTTVIAPENHPTHLHGFNFFAVGKGSGNFDPNKDPQKFNLVDPVERNTISVPTAG 499 (553)
Q Consensus 420 ~~~~~~~~~~~~~~~~g~~v~~~i~n~~~~~~~~HP~HlHG~~f~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g 499 (553)
+....+.++.|++++|+|.|.+ ...||||||||.|+|+++..+ .+.+|.++||+.|+|++
T Consensus 175 ------~~~~~l~v~~G~~vrlrliN~~---~~~h~~hlhGh~f~vi~~dG~-----------~~~~p~~~dtv~l~pge 234 (318)
T 3g5w_A 175 ------PETQPIRVKKGDVIRLRLIGAG---DHVHAIHTHGHISQIAFKDGF-----------PLDKPIKGDTVLIGPGE 234 (318)
T ss_dssp ------TSSCCEEECTTCEEEEEEEECS---SSCEEEEETTSCEEEEEETTE-----------EEEEEEEESEEEECTTC
T ss_pred ------CCCccEEeCCCCEEEEEEEeCC---CceEEEEECCcEEEEEecCCc-----------ccCCCccccEEEECCCC
Confidence 1223468899999999999975 457999999999999998522 12357799999999999
Q ss_pred EEEEEEEecCceeeEEeecchhhHh------ccceEEEEEeCCC
Q 008799 500 WTAIRFRADNPGVWFLHCHLEVHTS------WGLKMAFVVDNGK 537 (553)
Q Consensus 500 ~~~irf~adnpG~w~~HCHil~H~d------~GM~~~~~V~~~~ 537 (553)
++.|+|++++||.|+||||+++|++ .|||..++|....
T Consensus 235 r~~v~~~a~~pG~w~~hCH~~~H~~~g~~~~~Gm~~~i~~~g~~ 278 (318)
T 3g5w_A 235 RYDVILNMDNPGLWMIHDHVDTHTTNGDKPDGGIMTTIEYEEVG 278 (318)
T ss_dssp EEEEEEECCSCSEEEEEESSGGGSCBTTBSSCBSEEEEEETTTC
T ss_pred EEEEEEECCCCeeEEEEeccHHHhhccCcCCCCCEEEEEECCCC
Confidence 9999999999999999999999998 6899999987543
No 41
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes}
Probab=99.95 E-value=1.6e-27 Score=242.52 Aligned_cols=240 Identities=19% Similarity=0.206 Sum_probs=157.2
Q ss_pred ceEEECCcC-CCCCCCCCCCeEEEEEcCCEEEEEEEecCCCceEEEEEcCceEEEEe---eCCCcccceEeeEEEeCCCc
Q 008799 187 DAHTINGHP-GPVTNCTSQGFTLHVESGKTYLLRIVNAAVNDELFFKIAGHNLTVVE---VDSSYTKPFKTDTIFIGPGQ 262 (553)
Q Consensus 187 ~~~~iNG~~-~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via---~DG~~~~p~~~d~~~l~pge 262 (553)
..+++||+. + |+|++++|+++|+|++|.+... ..+|.|| +.+.+ .||.+. ++...|.|||
T Consensus 24 ~~~~~NG~~pG---------P~I~v~~Gd~v~v~v~N~l~~~-~siH~HG--~~~~~~~~~DGvp~----vtq~~I~PG~ 87 (339)
T 2zwn_A 24 KVFGFNGQVPG---------PLIHVQEGDDVIVNVTNNTSLP-HTIHWHG--VHQKGTWRSDGVPG----VTQQPIEAGD 87 (339)
T ss_dssp EEEEETTBSSC---------CEEEEETTCEEEEEEEEESSSC-BCCEEET--CCCTTCGGGSCCBT----TTBCCBCTTC
T ss_pred EEEEECCccCC---------CeEEEECCCEEEEEEEECCCCC-ccEEeCC--CCcCCCcccCCCCc----cccCccCCCC
Confidence 689999994 5 9999999999999999998643 4466665 44555 499852 2345799999
Q ss_pred cEEEEEEeCCCCCeeEEEEeeccccccccCCccEEEEEEEcCCCCCCCCccCCCCCCCCcccccccccccccccCCCCCC
Q 008799 263 TTNALLTADKKIGKYLITISPFMDTIVAVNNVTGIAFLRYKGTVAFSSTTLTNVPAINATEVTNTFSDNLRSLNSKRYPA 342 (553)
Q Consensus 263 R~dv~v~~~~~~g~~~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~~~p~ 342 (553)
|+++.+++++ +|+||++++.....+...... .+.+........ .+
T Consensus 88 ~~~y~f~~~~-~Gt~wyH~H~~~~~q~~~~Gl--~G~liV~p~~~~------~~-------------------------- 132 (339)
T 2zwn_A 88 SYTYKFKADR-IGTLWYHCHVNVNEHVGVRGM--WGPLIVDPKQPL------PI-------------------------- 132 (339)
T ss_dssp EEEEEEECCS-CEEEEEECCSSHHHHTTTSCC--EEEEEEECSSCC------TT--------------------------
T ss_pred eEEEEEECCC-CEEEEEEecCCchhhhhcCCc--eEeEEecCCCcc------cc--------------------------
Confidence 9999999986 799999998532111000122 222222211000 00
Q ss_pred CCCCCcceEEEEEeee-eccCC--ccC--CCC-ceeeEeeeceeeecCCchhhhhhhccccccccCCCCCCCCeeeccCC
Q 008799 343 KVPLTVDHSLLLTMAV-AVNPC--ATC--PNG-TKVGAAMNNISFVMPTTALLQAHYYKISGVFTDDFPAKPPIAFNYTG 416 (553)
Q Consensus 343 ~~p~~~d~~~~~~~~~-~~~~~--~~~--~~~-~~~~~~~n~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 416 (553)
+...++++.+.+.- ..... +.. ..+ ..-.|.+||+.
T Consensus 133 --~~~~d~e~~l~l~d~~~~~~~~~~~~g~~~~~~~~~~ING~~------------------------------------ 174 (339)
T 2zwn_A 133 --EKRVTKDVIMMMSTWESAVADKYGEGGTPMNVADYFSVNAKS------------------------------------ 174 (339)
T ss_dssp --GGGCSEEEEEEEEEECGGGTTCTTCCCSTTSCCCEEEETTBC------------------------------------
T ss_pred --cccCCceEEEEeeheecccccccCCCCCCccccceEEEcccc------------------------------------
Confidence 00112222211110 00000 000 000 00113344332
Q ss_pred CCCCccccCCCeeEEEecCCCEEEEEEEcCCCCCCCCCCeeecCCceEEEeeCCCCCCCCCCCCCCCCCCCCcceeeEec
Q 008799 417 NYTGTLQTTNGTRLYRLAYNSTVQLVLQGTTVIAPENHPTHLHGFNFFAVGKGSGNFDPNKDPQKFNLVDPVERNTISVP 496 (553)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~g~~v~~~i~n~~~~~~~~HP~HlHG~~f~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp 496 (553)
......+.++.|++++|.|.|.+ ...||||||||+|+|++.+.. ...+|.++||+.|+
T Consensus 175 --------~~~~~~~~v~~G~~vrlrliN~~---~~~h~~hlhGh~f~vi~~DG~-----------~~~~p~~~dtv~l~ 232 (339)
T 2zwn_A 175 --------FPLTQPLRVKKGDVVKIRFFGAG---GGIHAMHSHGHDMLVTHKDGL-----------PLDSPYYADTVLVS 232 (339)
T ss_dssp --------TTSSCCEEECTTCEEEEEEEECS---SSCEEEEETTCCEEEEEETTE-----------EEEEEEEESEEEEC
T ss_pred --------CCCcccEEECCCCEEEEEEEeCC---CceEEEEECCcEEEEEEeCCe-----------ecCCCcEEEEEEEC
Confidence 12223468889999999999975 458999999999999998522 12347889999999
Q ss_pred CCcEEEEEEEecCceeeEEeecchhh------HhccceEEEEEeCCC
Q 008799 497 TAGWTAIRFRADNPGVWFLHCHLEVH------TSWGLKMAFVVDNGK 537 (553)
Q Consensus 497 ~~g~~~irf~adnpG~w~~HCHil~H------~d~GM~~~~~V~~~~ 537 (553)
|++++.|+|++++||.|++|||+++| ++.||+..+.|....
T Consensus 233 pg~r~~v~~~~~~pG~w~~hch~~~H~~~~~~~~~gm~a~l~~~g~~ 279 (339)
T 2zwn_A 233 PGERYDVIIEADNPGRFIFHDHVDTHVTAGGKHPGGPITVIEYDGVP 279 (339)
T ss_dssp TTCEEEEEEECCSCSEEEEEECCGGGSCBTTBSSCSSEEEEEETTSC
T ss_pred CCCEEEEEEEeCCCeeEEEEEechhhcccccccCCCcEEEEEECCCC
Confidence 99999999999999999999999999 889999999887543
No 42
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP}
Probab=99.95 E-value=3.2e-27 Score=235.60 Aligned_cols=215 Identities=18% Similarity=0.240 Sum_probs=149.1
Q ss_pred eEEEEEcCCEEEEEEEecCCCceEEEEEcCceEEEEeeCCCcccceEeeEEEeCCCccEEEEEEeCC------------C
Q 008799 206 FTLHVESGKTYLLRIVNAAVNDELFFKIAGHNLTVVEVDSSYTKPFKTDTIFIGPGQTTNALLTADK------------K 273 (553)
Q Consensus 206 ~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~~p~~~d~~~l~pgeR~dv~v~~~~------------~ 273 (553)
|+|+++.|+++++++.|... ...++|.||..+. -+.||.++. .-.|.|||++...++++. .
T Consensus 58 P~i~~~~GD~v~v~~~N~l~-~~~siH~HG~~~~-~~~DG~~~~-----~~~i~PG~t~~Y~~~~~~~~~~~~~~~~~~~ 130 (299)
T 3t9w_A 58 PVLEMWEGDTLEIDLVNTTD-RVLSLHPHGVDYD-VNSDGTLMN-----GSAVMPGQTRRYTWRSHVGYRRADGSWAEGT 130 (299)
T ss_dssp CCEEEETTCEEEEEEEECSS-SCBCCEESSSBCC-GGGSCCTTT-----TCCBCTTCEEEEEEBCCCCEECTTSCEECCC
T ss_pred ceEEEECCeEEEEEEEECCC-CCccEEeCCcccC-CccCCCccc-----cCccCCCCeEEEEEEeecccccCCCcCCCCC
Confidence 89999999999999999975 4556999998665 367897542 124789999998887752 3
Q ss_pred CCeeEEEEeecccccc---ccCCccEEEEEEEcCCCCCCCCccCCCCCCCCcccccccccccccccCCCCCCCCCCCcce
Q 008799 274 IGKYLITISPFMDTIV---AVNNVTGIAFLRYKGTVAFSSTTLTNVPAINATEVTNTFSDNLRSLNSKRYPAKVPLTVDH 350 (553)
Q Consensus 274 ~g~~~i~~~~~~~~~~---~~~~~~~~ail~y~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~~~p~~~p~~~d~ 350 (553)
+|.||++++....... .... ..+.|...... +...|+
T Consensus 131 ~gt~~YH~H~~~~~~~~~~~~~G--L~G~liV~~~~--------------------------------------~~~~d~ 170 (299)
T 3t9w_A 131 AGYWHYHDHAMGTEHGTEGVLKG--LYGALVVRRQG--------------------------------------DLLPKR 170 (299)
T ss_dssp CEEEEEECSSSSSTTCHHHHHHT--CEEEEEEECTT--------------------------------------CCCCSE
T ss_pred ceeEEEecCCcccccchhhhccc--ccceEEEeccc--------------------------------------ccCccc
Confidence 5999999984221100 0111 22222221100 001245
Q ss_pred EEEEEeeeeccCCccCCCCceeeEeeeceeeecCCchhhhhhhccccccccCCCCCCCCeeeccCCCCCCccccCCCeeE
Q 008799 351 SLLLTMAVAVNPCATCPNGTKVGAAMNNISFVMPTTALLQAHYYKISGVFTDDFPAKPPIAFNYTGNYTGTLQTTNGTRL 430 (553)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 430 (553)
++.+.++. |.+|++.+ ...+.
T Consensus 171 e~~l~~~~---------------~~~Ng~~~--------------------------------------------~~~p~ 191 (299)
T 3t9w_A 171 QFTVVFND---------------MMINNRAH--------------------------------------------HDAPT 191 (299)
T ss_dssp EEEEEEET---------------TEETTCCT--------------------------------------------TCCCE
T ss_pred cceeeeee---------------eeecCccc--------------------------------------------ccccc
Confidence 55443221 55665422 11334
Q ss_pred EEecCCCEEEEEEEcCCCCCCCCCCeeecCCceEEEeeCCCCCCCCCCCCCCCCCCCCcceeeEecCCcEE---EEEEEe
Q 008799 431 YRLAYNSTVQLVLQGTTVIAPENHPTHLHGFNFFAVGKGSGNFDPNKDPQKFNLVDPVERNTISVPTAGWT---AIRFRA 507 (553)
Q Consensus 431 ~~~~~g~~v~~~i~n~~~~~~~~HP~HlHG~~f~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~---~irf~a 507 (553)
+.++.|++|+|+|.|.+ ...||||||||.|+|+..+... .....+.++||+.|.|+... +++|++
T Consensus 192 l~v~~Ge~Vr~~liN~~---~~~HpfHlHGh~F~v~~~g~~~---------~~~~~~~~~Dtv~v~PGe~~~~~via~~~ 259 (299)
T 3t9w_A 192 FEANLGERVEWIAIGHG---SNFHTFHLHGHRWLDNRTGMRT---------SEYDPSPLIDIKDLNPGVSFGFQVIAGEG 259 (299)
T ss_dssp EEEETTCEEEEEEEEES---SCCCEEEETTCCEESSSSSSCC---------STTCCCCEESEEECCTTCEEEEEEETTTT
T ss_pred ceecCCCEEEEEEEecc---ccceeeeEecceEEEEeccccc---------CCcCCCCceeeEEeCCceeEEEEEEEeeC
Confidence 68889999999999965 5689999999999998876322 12334568999999998654 556677
Q ss_pred cCceeeEEeecchhhHhccceEEEEEeCCCC
Q 008799 508 DNPGVWFLHCHLEVHTSWGLKMAFVVDNGKG 538 (553)
Q Consensus 508 dnpG~w~~HCHil~H~d~GM~~~~~V~~~~~ 538 (553)
+|||.|+|||||++|++.|||+.|+|++.+.
T Consensus 260 dnPG~w~~HCHi~~H~~~GM~~~f~V~~~~~ 290 (299)
T 3t9w_A 260 VGPGMWMYHCHVQNHSDMGMAGMFLVRNADG 290 (299)
T ss_dssp TCSEEEEEEECSHHHHHTTCEEEEEEECTTS
T ss_pred CCCeeEEEEcCCHHHHhcCCeEEEEEECCCC
Confidence 8999999999999999999999999987654
No 43
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3
Probab=99.89 E-value=1.3e-24 Score=217.76 Aligned_cols=237 Identities=14% Similarity=0.094 Sum_probs=134.9
Q ss_pred EEECCcCCCCCCCCCCCeEEEEEcCCEEEEEEEecCCCceEEEEEcCceEEEEeeCCCccc----ceEeeEEEeCCCccE
Q 008799 189 HTINGHPGPVTNCTSQGFTLHVESGKTYLLRIVNAAVNDELFFKIAGHNLTVVEVDSSYTK----PFKTDTIFIGPGQTT 264 (553)
Q Consensus 189 ~~iNG~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~~----p~~~d~~~l~pgeR~ 264 (553)
.++||.++ |+|++++|+++|+|+.|... ....+|.||..+.. +.||.+.. +...+...|.||||+
T Consensus 52 ~~~n~~pG---------P~I~v~~Gd~v~v~~~N~l~-~~~siH~HGl~~~~-~~dG~~~~dg~~~~~~~~~~I~PG~~~ 120 (306)
T 1sdd_A 52 SRTSGLLG---------PTLYAEVGDIMKVHFKNKAH-KPLSIHAQGIKYSK-FSEGASYSDHTLPMEKMDDAVAPGQEY 120 (306)
T ss_dssp CSSCCSCC---------CCEEEETTCEEEEEEEECSS-SCBCCEEESSCCCT-TTSCCCSCCCCCHHHHTTTCBCTTCEE
T ss_pred cccCCccC---------CEEEEeCCCEEEEEEEECCC-CcccEeecceeccc-ccCCCccCCCCcccccCCCccCCCCeE
Confidence 45788877 88999999999999999874 56679999887533 68887642 223335689999999
Q ss_pred EEEEEeCCCC---------CeeEEEEeeccccccccCCccEEEEEEEcCCCCCCCCccCCCCCCCCcccccccccccccc
Q 008799 265 NALLTADKKI---------GKYLITISPFMDTIVAVNNVTGIAFLRYKGTVAFSSTTLTNVPAINATEVTNTFSDNLRSL 335 (553)
Q Consensus 265 dv~v~~~~~~---------g~~~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l 335 (553)
+..+++++.+ |+||+|+|.....+ ....+.+ ++|.......... +..+. .+.. +.-.+..
T Consensus 121 ~Y~f~~~~~~gp~~~d~~~GT~wYHsH~~~~~q-~~~GL~G-~liV~~~~~~~~~---~~~~~-~d~e----~~l~~~d- 189 (306)
T 1sdd_A 121 TYEWIISEHSGPTHDDPPCLTHIYYSYVNLVED-FNSGLIG-PLLICKKGTLTED---GTQKM-FEKQ----HVLMFAV- 189 (306)
T ss_dssp EEEEECCGGGSCCSSSCSEEEEEEECCSSSHHH-HHTTCCE-EEEEECTTCBCTT---SSBSS-SCCC----CCCBCCE-
T ss_pred EEEEEeCCccCCCCCCCCceEEEEeccCCchhh-hccCceE-EEEEccCCCCCcc---CCcCc-ccce----EEEEEEe-
Confidence 9999997743 69999998421100 0122223 3444332111000 00000 0000 0000000
Q ss_pred cCCCCCCCCCCCcceEEEEEeeeeccCCccCCCCceeeEeeeceeeecCCchhhhhhhccccccccCCCCCCCCeeeccC
Q 008799 336 NSKRYPAKVPLTVDHSLLLTMAVAVNPCATCPNGTKVGAAMNNISFVMPTTALLQAHYYKISGVFTDDFPAKPPIAFNYT 415 (553)
Q Consensus 336 ~~~~~p~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 415 (553)
++..... ... ....+++||+.|
T Consensus 190 ------------------~d~~~~~-----~~~-~~~~~~ING~~~---------------------------------- 211 (306)
T 1sdd_A 190 ------------------FDESKSW-----NQT-SSLMYTVNGYVN---------------------------------- 211 (306)
T ss_dssp ------------------EETTSSS-----SCC-CCEEECSSSCCS----------------------------------
T ss_pred ------------------ccccccc-----ccC-CCcceeeCCEec----------------------------------
Confidence 0000000 000 011244555432
Q ss_pred CCCCCccccCCCeeEEEecCCCEEEEEEEcCCCCCCCCCCeeecCCceEEEeeCCCCCCCCCCCCCCCCCCCCcceeeEe
Q 008799 416 GNYTGTLQTTNGTRLYRLAYNSTVQLVLQGTTVIAPENHPTHLHGFNFFAVGKGSGNFDPNKDPQKFNLVDPVERNTISV 495 (553)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~g~~v~~~i~n~~~~~~~~HP~HlHG~~f~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~v 495 (553)
...+.+.++.|++++|.|.|.+. ....|+||+|||.|++ . | .++||+.|
T Consensus 212 ----------~~~p~l~v~~G~~vrlrliN~g~-~~~~h~~hlhG~~~~~--d--G----------------~~~dtv~l 260 (306)
T 1sdd_A 212 ----------GTMPDITVCAHDHISWHLIGMSS-GPELFSIHFNGQVLEQ--N--H----------------HKISAITL 260 (306)
T ss_dssp ----------SCCCCCCCCCC------BBCCCS-SSCEECCBCSSTTCEE--T--T----------------EECSCCCE
T ss_pred ----------CCCcceEEcCCCEEEEEEEeCCC-CCccEEEEECCcEeee--C--C----------------EEcceEEE
Confidence 01122466789999999999752 1257999999999986 1 1 35899999
Q ss_pred cCCcEEEEEEEecCceeeEEeecchhhHhccceEEEEEeCC
Q 008799 496 PTAGWTAIRFRADNPGVWFLHCHLEVHTSWGLKMAFVVDNG 536 (553)
Q Consensus 496 p~~g~~~irf~adnpG~w~~HCHil~H~d~GM~~~~~V~~~ 536 (553)
.|++.+.|+|++++||.|+||||+++|++.|||+.|.|.+.
T Consensus 261 ~pger~~v~~~~~~pG~~~~hch~~~H~~~GM~~~~~V~~~ 301 (306)
T 1sdd_A 261 VSATSTTANMTVSPEGRWTIASLIPRHFQAGMQAYIDIKNC 301 (306)
T ss_dssp ETTCCBC--------CCCCCBCCSTTTGGGTCBCCC-----
T ss_pred CCCcEEEEEEEcCCCeEEEEEeCChHHHhcCCeEEEEEecC
Confidence 99999999999999999999999999999999999999754
No 44
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ...
Probab=99.87 E-value=8.7e-21 Score=193.31 Aligned_cols=95 Identities=19% Similarity=0.233 Sum_probs=78.5
Q ss_pred eEEEecCCCEEEEEEEcCCCCCCCCCCeeecCCceEEEeeCCCCCCCCCCCCCCCCCCCC--cceeeEecCCcEEEEEEE
Q 008799 429 RLYRLAYNSTVQLVLQGTTVIAPENHPTHLHGFNFFAVGKGSGNFDPNKDPQKFNLVDPV--ERNTISVPTAGWTAIRFR 506 (553)
Q Consensus 429 ~~~~~~~g~~v~~~i~n~~~~~~~~HP~HlHG~~f~Vl~~g~g~~~~~~~~~~~~~~~p~--~rDTv~vp~~g~~~irf~ 506 (553)
..+.++.|++++|++.|.+ ...|++|+|||.|+|+..| .+ .++. ++||+.|++++.+.|.|+
T Consensus 231 ~~l~v~~G~r~Rl~n~~~~---~~~~~~~i~gh~~~Vi~dG--~~-----------~~~p~~~~dtv~l~pGer~~v~v~ 294 (340)
T 2bw4_A 231 HALTAAVGERVLVVHSQAN---RDTRPHLIGGHGDYVWATG--KF-----------RNPPDLDQETWLIPGGTAGAAFYT 294 (340)
T ss_dssp GCEEEETTCEEEEEEEESS---SCBCEEEETCCEEEEETTC--CT-----------TSCCEEEESCCCBCTTEEEEEEEE
T ss_pred CceEcCCCCEEEEEECCCC---CccceEEecCcceEEeCCC--cc-----------cCCccccceEEEeCCCceEEEEEE
Confidence 4578899999998776643 5678999999999998632 21 1222 579999999999999999
Q ss_pred ecCceeeEEeecch-hhHhccceEEEEEeCCCCC
Q 008799 507 ADNPGVWFLHCHLE-VHTSWGLKMAFVVDNGKGP 539 (553)
Q Consensus 507 adnpG~w~~HCHil-~H~d~GM~~~~~V~~~~~~ 539 (553)
+++||.|+||||++ +|++.|||+.|+|.....+
T Consensus 295 ~~~pG~y~~~~h~~~~h~~~Gm~~~~~V~~~~~~ 328 (340)
T 2bw4_A 295 FRQPGVYAYVNHNLIEAFELGAAGHFKVTGEWND 328 (340)
T ss_dssp CCSCEEEEEEESSHHHHHTTSCEEEEEEESCCCT
T ss_pred CCCCeeeEEEcCchHHHHhCCCEEEEEECCCCch
Confidence 99999999999999 5999999999999876653
No 45
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2
Probab=99.87 E-value=2.4e-21 Score=213.86 Aligned_cols=245 Identities=14% Similarity=0.175 Sum_probs=141.3
Q ss_pred eEEEEEcCCEEEEEEEecCCCceEEEEEcCceEEEEeeCCCccc---c-eEeeEEEeCCCccEEEEEEeCCC-----CC-
Q 008799 206 FTLHVESGKTYLLRIVNAAVNDELFFKIAGHNLTVVEVDSSYTK---P-FKTDTIFIGPGQTTNALLTADKK-----IG- 275 (553)
Q Consensus 206 ~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~~---p-~~~d~~~l~pgeR~dv~v~~~~~-----~g- 275 (553)
|+|+++.|+++++|+.|... ....+|.||.... .+.||.+.. | ..+....|.||++++..+++++. +|
T Consensus 69 P~I~~~~Gd~v~v~~~N~l~-~~~siH~HGl~~~-~~~DG~~~~~~~~~~~~~~~~I~PG~~~tY~f~~~~~~gp~~~G~ 146 (647)
T 1sdd_B 69 PVIRAEVDDVIQVRFKNLAS-RPYSLHAHGLSYE-KSSEGKTYEDDSPEWFKEDNAIQPNKTYTYVWHATTRSGPENPGS 146 (647)
T ss_dssp CCEEEETTCEEEEEECCCSS-SCBCCEEETCC----------------------CCBCTTCCEECCEECCTTTSCCSSSC
T ss_pred ceEEEeCCCEEEEEEEECCC-CceEEecCcceeC-CCCCCccccCCCCcccccCcccCCCCeEEEEEECCcccCCCCCCC
Confidence 89999999999999999985 4566999998765 478997531 2 22345689999999999999874 47
Q ss_pred ---eeEEEEeeccccccccCCccEEEEEEEcCCCCCCCCccCCCCCCCCcccccccccccccccCCCCCCCCCCCcceEE
Q 008799 276 ---KYLITISPFMDTIVAVNNVTGIAFLRYKGTVAFSSTTLTNVPAINATEVTNTFSDNLRSLNSKRYPAKVPLTVDHSL 352 (553)
Q Consensus 276 ---~~~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~~~p~~~p~~~d~~~ 352 (553)
+||+|+|.....+ ....+.+ ++|.......... +..|. .++++
T Consensus 147 ~c~T~wYHsH~~~~~q-~~~GL~G-~lIV~~~~~~~~~---~~~~~-----------------------------~~~e~ 192 (647)
T 1sdd_B 147 ACRAWAYYSAVNPEKD-IHSGLIG-PLLICRKGTLDKE---TNMPV-----------------------------DMREF 192 (647)
T ss_dssp SEEEEEEECCSSHHHH-HTTTCEE-EEEEECTTSSCTT---SCCCS-----------------------------SCCEE
T ss_pred CceEEEEccCCCCccc-ccccCcc-CEEEeeCCCcccc---cCCCC-----------------------------cceeE
Confidence 9999999631110 1122222 3333321111000 00000 01112
Q ss_pred EEEee-eeccCCccCCCCceeeEeeeceeeecCCchhhhhhhccccccccCCCCCCCCeeeccCCCCCCccccCCCeeEE
Q 008799 353 LLTMA-VAVNPCATCPNGTKVGAAMNNISFVMPTTALLQAHYYKISGVFTDDFPAKPPIAFNYTGNYTGTLQTTNGTRLY 431 (553)
Q Consensus 353 ~~~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 431 (553)
.+.+. +.. +..|........ . + .....++. ..+..+..+ +... ..+.+
T Consensus 193 ~l~l~~~d~-----------------~~~w~~~~~~~~-~-~----~~~~~~~~-~~~~~~~iN------G~~~-~~p~l 241 (647)
T 1sdd_B 193 VLLFMVFDE-----------------KKSWYYDKKPTR-S-W----RRASSEVK-NSHEFHAIN------GMIY-NLPGL 241 (647)
T ss_dssp EEEEEEEEG-----------------GGSSCCC----------------------CCCEEEEET------TBSS-CCCCC
T ss_pred EEEEEeecC-----------------ccccccccCccc-c-c----ccCCcchh-hcCceeccC------CEec-CCCCe
Confidence 11111 000 000000000000 0 0 00000000 000111111 1111 12346
Q ss_pred EecCCCEEEEEEEcCCCCCCCCCCeeecCCceEEEeeCCCCCCCCCCCCCCCCCCCCcceeeEecCCcEEEEEEEecCce
Q 008799 432 RLAYNSTVQLVLQGTTVIAPENHPTHLHGFNFFAVGKGSGNFDPNKDPQKFNLVDPVERNTISVPTAGWTAIRFRADNPG 511 (553)
Q Consensus 432 ~~~~g~~v~~~i~n~~~~~~~~HP~HlHG~~f~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~adnpG 511 (553)
.++.|++++|.|.|.+. ..+.||||+|||.|+|++.+ +.++||+.|.|++++.|+|++++||
T Consensus 242 ~v~~G~~vrlrliN~~~-~~~~h~~hlhG~~f~vi~~d-----------------~~~~d~v~l~pg~r~~v~~~~~~pG 303 (647)
T 1sdd_B 242 RMYEQEWVRLHLLNLGG-SRDIHVVHFHGQTLLENGTQ-----------------QHQLGVWPLLPGSFKTLEMKASKPG 303 (647)
T ss_dssp EEETTCEEEEEEEECCC-TTCCEEEEETTCCEEECSSS-----------------CEEESSEEECTTEEEEEEEECCSSE
T ss_pred EEcCCCEEEEEEEeCCC-CCcceeEEEcCcEEEEecCC-----------------CcccceEEECCCeEEEEEEEeccce
Confidence 78899999999999651 13589999999999998652 4579999999999999999999999
Q ss_pred eeEEeecchhhHhccceEEEEEeC
Q 008799 512 VWFLHCHLEVHTSWGLKMAFVVDN 535 (553)
Q Consensus 512 ~w~~HCHil~H~d~GM~~~~~V~~ 535 (553)
.|+||||+++|++.|||..|.|.+
T Consensus 304 ~w~~hch~~~h~~~Gm~~~~~V~~ 327 (647)
T 1sdd_B 304 WWLLDTEVGEIQRAGMQTPFLIVD 327 (647)
T ss_dssp EEEEECCCHHHHTTTCEEEEEEEC
T ss_pred EeecccCcccccccccccceeeec
Confidence 999999999999999999999974
No 46
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A
Probab=99.87 E-value=5.9e-21 Score=193.04 Aligned_cols=237 Identities=17% Similarity=0.158 Sum_probs=156.1
Q ss_pred ceEEECCcC-CCCCCCCCCCeEEEEEcCCEEEEEEEecCCC-ceEEEEEcCceEEEEeeCCCcccceEeeEEEeCCCccE
Q 008799 187 DAHTINGHP-GPVTNCTSQGFTLHVESGKTYLLRIVNAAVN-DELFFKIAGHNLTVVEVDSSYTKPFKTDTIFIGPGQTT 264 (553)
Q Consensus 187 ~~~~iNG~~-~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~-~~~~~~i~gh~~~via~DG~~~~p~~~d~~~l~pgeR~ 264 (553)
..|++||+. + |+|++++|+++|||++|.... ..+.+|+||.. +.||... ...|.|||++
T Consensus 59 ~~~~~ng~~pg---------P~i~v~~Gd~v~v~~~N~~~~~~~~~ih~HG~~----~~dG~~~------~~~i~PG~~~ 119 (327)
T 1kbv_A 59 RYWTFDGDVPG---------RMIRVREGDTVEVEFSNNPSSTVPHNVDFHAAT----GQGGGAA------ATFTAPGRTS 119 (327)
T ss_dssp EEEEETTBSSC---------CBEEEETTCEEEEEEEECTTCSSCBCCEETTCC----SGGGGTT------TTCBCTTEEE
T ss_pred EEEEECCccCC---------CeEEEeCCCEEEEEEEECCCCCCceeeEeCccc----cCCCCCc------ceeecCCCEE
Confidence 579999983 3 889999999999999999753 46779999863 5788642 1248999999
Q ss_pred EEEEEeCCCCCeeEEEEeeccccccccCCccEEEEEEEcCCCCCCCCccCCCCCCCCcccccccccccccccCCCCCCCC
Q 008799 265 NALLTADKKIGKYLITISPFMDTIVAVNNVTGIAFLRYKGTVAFSSTTLTNVPAINATEVTNTFSDNLRSLNSKRYPAKV 344 (553)
Q Consensus 265 dv~v~~~~~~g~~~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~~~p~~~ 344 (553)
++.+++++ +|+||+||+............. .+++... ... +|.
T Consensus 120 ~y~f~~~~-~Gt~wyH~h~~~~~~~~~~Gl~-G~~iV~~-~~~--------~p~-------------------------- 162 (327)
T 1kbv_A 120 TFSFKALQ-PGLYIYHCAVAPVGMHIANGMY-GLILVEP-KEG--------LPK-------------------------- 162 (327)
T ss_dssp EEEEECCS-CEEEEEECCCSSHHHHHHTTCE-EEEEEEC-TTC--------CCC--------------------------
T ss_pred EEEEECCC-CeEEEEEeCCCChhhhhhcceE-EEEEEec-CCC--------CCC--------------------------
Confidence 99999987 7999999985321110111222 2333322 110 111
Q ss_pred CCCcceEEEEEeeeeccCCccCCCC------------ceeeEeeeceeeecCCchhhhhhhccccccccCCCCCCCCeee
Q 008799 345 PLTVDHSLLLTMAVAVNPCATCPNG------------TKVGAAMNNISFVMPTTALLQAHYYKISGVFTDDFPAKPPIAF 412 (553)
Q Consensus 345 p~~~d~~~~~~~~~~~~~~~~~~~~------------~~~~~~~n~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 412 (553)
.|+++.+.+.--.........| ..-.+.+||+.+.
T Consensus 163 ---~d~e~~l~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~~~iNG~~~~------------------------------ 209 (327)
T 1kbv_A 163 ---VDKEFYIVQGDFYTKGKKGAQGLQPFDMDKAVAEQPEYVVFNGHVGA------------------------------ 209 (327)
T ss_dssp ---CSEEEEEEEEEECBSSCTTCCEEECBCHHHHHHTCCSEEEETTSTTT------------------------------
T ss_pred ---CceEEEEEeeeeeccCccccccccccChhHhccCCCceEEEcCcccC------------------------------
Confidence 1111111100000000000000 0001223332110
Q ss_pred ccCCCCCCccccCCCeeEEEecCCCEEEEEEEcCCCCCCCCCCeeecCCceEEEeeCCCCCCCCCCCCCCCCCCCCccee
Q 008799 413 NYTGNYTGTLQTTNGTRLYRLAYNSTVQLVLQGTTVIAPENHPTHLHGFNFFAVGKGSGNFDPNKDPQKFNLVDPVERNT 492 (553)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~i~n~~~~~~~~HP~HlHG~~f~Vl~~g~g~~~~~~~~~~~~~~~p~~rDT 492 (553)
......+.++.|++++|.|.|.+ ....|+||+|||.|+|++...+ +..|.++|+
T Consensus 210 ------------~~~~~~l~v~~G~~vRlRliN~~--~~~~~~~~l~Gh~f~vi~~DG~------------~~~p~~~d~ 263 (327)
T 1kbv_A 210 ------------LTGDNALKAKAGETVRMYVGNGG--PNLVSSFHVIGEIFDKVYVEGG------------KLINENVQS 263 (327)
T ss_dssp ------------TSGGGCEEEETTEEEEEEEEEEE--SSCCEEEEEETCCBSEEEGGGS------------SCEECSBSE
T ss_pred ------------CCCceeEEeCCCCEEEEEEECCC--CCCceeEEEeCCEEEEEEcCCC------------cCCCCceeE
Confidence 00113468899999999999965 2468999999999999998633 123678999
Q ss_pred eEecCCcEEEEEEEecCceeeEEeecchhhH-hccceEEEEEeCCCC
Q 008799 493 ISVPTAGWTAIRFRADNPGVWFLHCHLEVHT-SWGLKMAFVVDNGKG 538 (553)
Q Consensus 493 v~vp~~g~~~irf~adnpG~w~~HCHil~H~-d~GM~~~~~V~~~~~ 538 (553)
+.|.+|+.+.|.|++++||.|++|||+.+|. ..||++.+.|.....
T Consensus 264 l~l~pGer~dv~v~~~~pG~y~l~~h~~~~~~~~g~~a~l~~~g~~~ 310 (327)
T 1kbv_A 264 TIVPAGGSAIVEFKVDIPGNYTLVDHSIFRAFNKGALGQLKVEGAEN 310 (327)
T ss_dssp EEECTTEEEEEEEEECSCEEEEEEESSTHHHHHSSCEEEEEEESCCC
T ss_pred EEECCCCEEEEEEEeCCCeEEEEEeccccccccCCcEEEEEECCCCC
Confidence 9999999999999999999999999999995 889999999986543
No 47
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A
Probab=99.82 E-value=5.3e-19 Score=179.51 Aligned_cols=94 Identities=16% Similarity=0.204 Sum_probs=74.1
Q ss_pred eEEEecCCCEEEEEEEcCCCCCCCCCCeeecCCceEEEeeCCCCCCCCCCCCCCCCCC-CC-cceeeEecCCcEEEEEEE
Q 008799 429 RLYRLAYNSTVQLVLQGTTVIAPENHPTHLHGFNFFAVGKGSGNFDPNKDPQKFNLVD-PV-ERNTISVPTAGWTAIRFR 506 (553)
Q Consensus 429 ~~~~~~~g~~v~~~i~n~~~~~~~~HP~HlHG~~f~Vl~~g~g~~~~~~~~~~~~~~~-p~-~rDTv~vp~~g~~~irf~ 506 (553)
..+.++.|++++|++.|.+ ...|++++|+|.|+|++. |.+ .+ |. ++||+.|.+++.+.|.|+
T Consensus 225 ~~l~v~~Ger~Rl~n~~~~---~~~~~h~i~~h~~~Vi~d--G~~-----------~~~p~~~~dtv~l~pGer~~v~v~ 288 (333)
T 1mzy_A 225 GALKAKVGDNVLFVHSQPN---RDSRPHLIGGHGDLVWET--GKF-----------HNAPERDLETWFIRGGTAGAALYK 288 (333)
T ss_dssp GCEEEETTCEEEEEEEESS---SCBCEEEETCCEEEEETT--CCT-----------TSCCEEEESBCCBCTTEEEEEEEE
T ss_pred cceEecCCCEEEEEECCCC---CccccEEECCCCeEEEeC--Ccc-----------cCCCccCcceEEECCCceEEEEEE
Confidence 3478899999988776633 233444567788888873 321 12 22 689999999999999999
Q ss_pred ecCceeeEEeecchhhH-hccceEEEEEeCCCC
Q 008799 507 ADNPGVWFLHCHLEVHT-SWGLKMAFVVDNGKG 538 (553)
Q Consensus 507 adnpG~w~~HCHil~H~-d~GM~~~~~V~~~~~ 538 (553)
+++||.|+||||++.|+ +.|||+.|+|.....
T Consensus 289 a~~pG~y~~~ch~~~h~~~~Gm~~~~~v~~~~~ 321 (333)
T 1mzy_A 289 FLQPGVYAYVNHNLIEAVHKGATAHVLVEGEWD 321 (333)
T ss_dssp CCSCEEEEEEESSHHHHHTTCCEEEEEEESCCC
T ss_pred cCCCEEEEEecChhhhHhhCCCEEEEEEcCCCC
Confidence 99999999999999997 999999999987554
No 48
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B*
Probab=99.82 E-value=2.3e-21 Score=215.35 Aligned_cols=246 Identities=11% Similarity=0.106 Sum_probs=148.8
Q ss_pred eEEEEEcCCEEEEEEEecCCCceEEEEEcCceEEEEeeCCCcccceEeeEEEeCCCccEEEEEEeCC---------CCCe
Q 008799 206 FTLHVESGKTYLLRIVNAAVNDELFFKIAGHNLTVVEVDSSYTKPFKTDTIFIGPGQTTNALLTADK---------KIGK 276 (553)
Q Consensus 206 ~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~~p~~~d~~~l~pgeR~dv~v~~~~---------~~g~ 276 (553)
|+|+++.|+++++++.|... ....+|.||..+....-||..- ....|.||++++..+++++ .+|.
T Consensus 199 P~Ir~~~GD~v~v~~~N~l~-~~~siH~HG~~~~~~~~dG~~~-----~~~~I~PG~~~tY~f~~~~~~gp~~~d~~~Gt 272 (770)
T 2r7e_B 199 PYIRAEVEDNIMVTFRNQAS-RPYSFYSSLISYEEDQRQGAEP-----RKNFVKPNETKTYFWKVQHHMAPTKDEFDCKA 272 (770)
T ss_dssp CCCCCCSSSCEEEEEECCSS-SCCCCCBTTCCCCCCSSSCTTT-----TSSCCCSSCEEEEECCCCSSSSCCSSCCSEEE
T ss_pred CeEEEEcCCEEEEEEEECCC-CCcceeecccccccccCCCCcC-----ccCccCCCCeEEEEEEecCccCCccCCCCCee
Confidence 88999999999999999975 5666999998776544458642 1246899999999999884 4699
Q ss_pred eEEEEeeccccccccCCccEEEEEEEcCCCCCCCCccCCCCCCCCcccccccccccccccCCCCCCCCCCCcceEEEEEe
Q 008799 277 YLITISPFMDTIVAVNNVTGIAFLRYKGTVAFSSTTLTNVPAINATEVTNTFSDNLRSLNSKRYPAKVPLTVDHSLLLTM 356 (553)
Q Consensus 277 ~~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~~~p~~~p~~~d~~~~~~~ 356 (553)
||.|+|.....+ ....+.+.-+ +.......+ .. .+...++++.+.+
T Consensus 273 ~wYHsh~~~~~q-~~~GL~G~li--V~~~~~~~~----~~---------------------------~~~~~d~E~vl~~ 318 (770)
T 2r7e_B 273 WAYSSDVDLEKD-VHSGLIGPLL--VCHTNTLNP----AH---------------------------GRQVTVQEFALFF 318 (770)
T ss_dssp EEECCCSSSSHH-HHTSCCEEEE--EECSTTSCS----SS---------------------------CCCCSSEEEECCC
T ss_pred EEeeccCCcHHH-HhCCceeeEE--ECCCccccc----cc---------------------------CCCccceEEEEEE
Confidence 999998532100 1122222222 222111000 00 0001122222111
Q ss_pred eeeccCCccCCCCceeeEeeeceeeecCCchhhhhhhcccccc--ccCCCCCCCCeeeccCCCCCCccccCCCeeEEEec
Q 008799 357 AVAVNPCATCPNGTKVGAAMNNISFVMPTTALLQAHYYKISGV--FTDDFPAKPPIAFNYTGNYTGTLQTTNGTRLYRLA 434 (553)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~n~~~~~~p~~~~~~~~~~~~~~~--~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (553)
..-. .+.+|..... +..+....... ....+... ..++ .+|+........+.++
T Consensus 319 ~~~d----------------e~~swy~~~~--~~~~~~~p~~~~~~d~~~~~~-~~~~------~ING~~~~~~~~l~v~ 373 (770)
T 2r7e_B 319 TIFD----------------ETKSWYFTEN--MERNCRAPCNIQMEDPTFKEN-YRFH------AINGYIMDTLPGLVMA 373 (770)
T ss_dssp CEEC----------------CSSSSCTTGG--GSSCSCCSSCCCSSSSSSTTT-SCEE------CTTSCTTTTCCCCCCC
T ss_pred eecC----------------ccccchhccc--hhhcccCccccccCCcccccc-CCcc------ccCCccCCCCCCeEEe
Confidence 0000 0001100000 00000000000 00000000 0011 2333333334556788
Q ss_pred CCCEEEEEEEcCCCCCCCCCCeeecCCceEEEeeCCCCCCCCCCCCCCCCCCCCcceeeEecCCcEEEEEEEecCceeeE
Q 008799 435 YNSTVQLVLQGTTVIAPENHPTHLHGFNFFAVGKGSGNFDPNKDPQKFNLVDPVERNTISVPTAGWTAIRFRADNPGVWF 514 (553)
Q Consensus 435 ~g~~v~~~i~n~~~~~~~~HP~HlHG~~f~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~adnpG~w~ 514 (553)
.|++++|.|.|.+. ..+.||||||||.|+|++.+ +.++||+.|+|++++.|+|++++||.|+
T Consensus 374 ~Ge~vr~rliN~g~-~~~~H~fHlhGh~f~Vv~~d-----------------g~~~Dtv~l~Pg~~~~v~~~ad~pG~w~ 435 (770)
T 2r7e_B 374 QDQRIRWYLLSMGS-NENIHSIHFSGHVFTVRKKE-----------------EYKMALYNLYPGVFETVEMLPSKAGIWR 435 (770)
T ss_dssp SSSCEEEECCCCCS-SSCCCEEEBSSCCEECCSSS-----------------CCEESEEECCTTCCCEEEECCSSCBCCC
T ss_pred CCCEEEEEEEeCCC-CcceEEEEEcCCEEEEEecC-----------------CceeeEEEECCCeEEEEEEEeCCCCceE
Confidence 99999999999752 23579999999999998764 1389999999999999999999999999
Q ss_pred EeecchhhHhccceEEEEEe
Q 008799 515 LHCHLEVHTSWGLKMAFVVD 534 (553)
Q Consensus 515 ~HCHil~H~d~GM~~~~~V~ 534 (553)
||||+++|++.|||..|.|.
T Consensus 436 ~hcH~~~H~~~GM~~~~~V~ 455 (770)
T 2r7e_B 436 VECLIGEHLHAGMSTLFLVY 455 (770)
T ss_dssp BCCCSHHHHTTBCCCCCCBC
T ss_pred EEeccccccccccccccccc
Confidence 99999999999999999884
No 49
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ...
Probab=99.80 E-value=5.1e-18 Score=172.49 Aligned_cols=276 Identities=18% Similarity=0.228 Sum_probs=156.8
Q ss_pred ceEEECCcC-CCCCCCCCCCeEEEEEcCCEEEEEEEecCCC-ceEEEEEcCceEEEEeeCCCcccceEeeEEEeCCCccE
Q 008799 187 DAHTINGHP-GPVTNCTSQGFTLHVESGKTYLLRIVNAAVN-DELFFKIAGHNLTVVEVDSSYTKPFKTDTIFIGPGQTT 264 (553)
Q Consensus 187 ~~~~iNG~~-~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~-~~~~~~i~gh~~~via~DG~~~~p~~~d~~~l~pgeR~ 264 (553)
..|++||+. + |+|+++.|+++++|+.|.... ..+.+++||+.. .||.. +. . .|.||+++
T Consensus 54 ~~~~~ng~~pg---------P~i~v~~Gd~v~v~~~N~~~~~~~h~~~~h~~~~----~~~~~--~~--~--~i~pG~~~ 114 (336)
T 1oe1_A 54 QAMTFNGSMPG---------PTLVVHEGDYVQLTLVNPATNAMPHNVDFHGATG----ALGGA--KL--T--NVNPGEQA 114 (336)
T ss_dssp EEEEETTBSSC---------CCEEEETTCEEEEEEEECTTCCSCBCCEETTSCS----GGGGG--GG--C--CBCTTEEE
T ss_pred EEEEECCccCC---------CeEEEcCCCEEEEEEEcCCCCCccccceECCCCC----CCCCc--ce--E--EeCCCCEE
Confidence 679999983 3 889999999999999999642 455689998753 33331 21 1 39999999
Q ss_pred EEEEEeCCCCCeeEEEEeeccc-cccccCCccEEEEEEEcCCCCCCCCccCCCCCCCCcccccccccccccccCCCCCCC
Q 008799 265 NALLTADKKIGKYLITISPFMD-TIVAVNNVTGIAFLRYKGTVAFSSTTLTNVPAINATEVTNTFSDNLRSLNSKRYPAK 343 (553)
Q Consensus 265 dv~v~~~~~~g~~~i~~~~~~~-~~~~~~~~~~~ail~y~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~~~p~~ 343 (553)
+..+++++ +|+||+|||.... .........+.-+++.... . . . .+ .
T Consensus 115 ~y~f~~~~-~Gt~~yH~h~~~~~~~~~~~Gl~G~liV~~~~~-~-~--------~---------------~~-------~ 161 (336)
T 1oe1_A 115 TLRFKADR-SGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDG-L-K--------D---------------PQ-------G 161 (336)
T ss_dssp EEEEECCS-CEEEEEECCCTTCHHHHHHTTCEEEEEEECTTC-C-B--------C---------------TT-------S
T ss_pred EEEEECCC-CeEEEEecCCCCchhHHHhCCCeEEEEEecCcC-C-c--------c---------------cc-------c
Confidence 99999987 7999999995311 0001122223333321110 0 0 0 00 0
Q ss_pred CCCCcceEEEEEeeeeccCCccCCCCceeeEeeeceeeecCCchhhhhhhccccccccCCCCCCCCeeeccCCCCCCccc
Q 008799 344 VPLTVDHSLLLTMAVAVNPCATCPNGTKVGAAMNNISFVMPTTALLQAHYYKISGVFTDDFPAKPPIAFNYTGNYTGTLQ 423 (553)
Q Consensus 344 ~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 423 (553)
.|...|+++.+.+. ..-.....+|. + ..|..+.......... ..+ . .+..+-.+|...
T Consensus 162 ~~~~~D~e~~l~~~--D~~~~~~~~g~-~------~~~~~~~~~~~~~~~~-~~~----~----~~~~~liNG~~~---- 219 (336)
T 1oe1_A 162 KPLHYDRAYTIGEF--DLYIPKGPDGK-Y------KDYATLAESYGDTVQV-MRT----L----TPSHIVFNGKVG---- 219 (336)
T ss_dssp CBCCCSEEEEEEEE--EECCCBCTTSS-B------CCCSSTGGGHHHHHHH-HHT----T----CCSEEEETTSTT----
T ss_pred CcccCCceeEeeee--eeeeccccCCc-e------eecccccccccchhhH-hhc----C----CCCEEEECCeec----
Confidence 01123444433221 00000000000 0 0010000000000000 000 0 011111222110
Q ss_pred cCCCeeEEEecCCCEEEEEEEcCCCCCCCCCCeeecCCceEEEeeCCCCCCCCCCCCCCCCCCCC--cceeeEecCCcEE
Q 008799 424 TTNGTRLYRLAYNSTVQLVLQGTTVIAPENHPTHLHGFNFFAVGKGSGNFDPNKDPQKFNLVDPV--ERNTISVPTAGWT 501 (553)
Q Consensus 424 ~~~~~~~~~~~~g~~v~~~i~n~~~~~~~~HP~HlHG~~f~Vl~~g~g~~~~~~~~~~~~~~~p~--~rDTv~vp~~g~~ 501 (553)
...+...+.++.|++++|+..+.+ ...+++++|||.|.|+.. |.+ .+|. +.||+.|++|+..
T Consensus 220 ~~~~~~~l~v~~GervRlin~~~~---~~~~~~~i~gh~~~Vi~D--G~~-----------~~p~~~~~dtv~i~pGer~ 283 (336)
T 1oe1_A 220 ALTGANALTAKVGETVLLIHSQAN---RDTRPHLIGGHGDWVWET--GKF-----------ANPPQRDLETWFIRGGSAG 283 (336)
T ss_dssp TTSGGGCEEEETTCEEEEEEEESS---SCBCEEETTCCEEEEETT--CCT-----------TSCCEEEESBCCBCTTEEE
T ss_pred cCCCCcceEcCCCCEEEEEecCCC---CccceEEECCcCceEeCC--CcC-----------cCCccccceEEEECCCCcE
Confidence 001134578999999998655432 345666679999999862 321 2232 4699999999999
Q ss_pred EEEEEecCceeeEEeecchhhH-hccceEEEEEeCCCCCCC-CCCCCCCCCCC
Q 008799 502 AIRFRADNPGVWFLHCHLEVHT-SWGLKMAFVVDNGKGPNE-SLIPPPSDLPT 552 (553)
Q Consensus 502 ~irf~adnpG~w~~HCHil~H~-d~GM~~~~~V~~~~~~~~-~~~~~p~~~~~ 552 (553)
.+.+++++||.|+||||.+.|. +.||++.|.|+....+.. .....|.-+|+
T Consensus 284 dvlv~~~~pG~y~~~~h~~~~~~~~G~~~~~~V~~~~~~~~~~~~~~~~~~~~ 336 (336)
T 1oe1_A 284 AALYTFKQPGVYAYLNHNLIEAFELGAAGHIKVEGKWNDDLMKQIKAPAPIPR 336 (336)
T ss_dssp EEEEECCSCEEEEEEESSHHHHHTTSCEEEEEEESCCCTTTCCCSSCSCCCCC
T ss_pred EEEEEcCCCceEEEEechhhccccCCCeEEEEECCCCChHHhccCCCCCCCCC
Confidence 9999999999999999999986 999999999987666442 44556655553
No 50
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis}
Probab=99.79 E-value=2.4e-18 Score=181.60 Aligned_cols=237 Identities=15% Similarity=0.128 Sum_probs=155.8
Q ss_pred ceEEECCcC-CCCCCCCCCCeEEEEEcCCEEEEEEEecCCC-ceEEEEEcCceEEEEeeCCCcccceEeeEEEeCCCccE
Q 008799 187 DAHTINGHP-GPVTNCTSQGFTLHVESGKTYLLRIVNAAVN-DELFFKIAGHNLTVVEVDSSYTKPFKTDTIFIGPGQTT 264 (553)
Q Consensus 187 ~~~~iNG~~-~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~-~~~~~~i~gh~~~via~DG~~~~p~~~d~~~l~pgeR~ 264 (553)
..|++||+. + |+|+++.|++++||+.|.... ..+.+|+||+. ..||... +..|.||+++
T Consensus 49 ~~~~~ng~~pg---------p~i~v~~Gd~v~v~~~N~l~~~~~~~iH~HG~~----~~dG~~~------~~~i~pg~~~ 109 (442)
T 2zoo_A 49 VFWSFGETVPG---------SFIRVREGDEIEFNLSNHPSSKMPHNIDLHAVT----GPGGGAE------SSFTAPGHTS 109 (442)
T ss_dssp EEEEETTBSSC---------CBEEEETTCEEEEEEEECTTCSSCBCCEETTCC----SGGGGGG------GCCBCTTCEE
T ss_pred EEEEECCcCCC---------CcEEEeCCCEEEEEEEECCCCCCCCCEEecCCc----CCCCCCc------cEEECCCCEE
Confidence 679999985 3 889999999999999999643 46679999975 4677532 2358999999
Q ss_pred EEEEEeCCCCCeeEEEEeeccccccccCCccEEEEEEEcCCCCCCCCccCCCCCCCCcccccccccccccccCCCCCCCC
Q 008799 265 NALLTADKKIGKYLITISPFMDTIVAVNNVTGIAFLRYKGTVAFSSTTLTNVPAINATEVTNTFSDNLRSLNSKRYPAKV 344 (553)
Q Consensus 265 dv~v~~~~~~g~~~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~~~p~~~ 344 (553)
++.+++++ +|.||+|||.......... +..+.+.+..... .|.
T Consensus 110 ~y~f~~~~-~Gt~~yH~H~~~~~~~~~~--Gl~G~~iv~~~~~--------~~~-------------------------- 152 (442)
T 2zoo_A 110 TFNFKALN-PGLYIYHCATAPVGMHIAN--GMYGLILVEPKEG--------LAP-------------------------- 152 (442)
T ss_dssp EEEEECCS-CEEEEEECCCSSHHHHHHT--TCEEEEEEECTTC--------CCC--------------------------
T ss_pred EEEEEcCC-CeEEEEecCCCChHHHHhC--ccEEEEEEeCCCC--------CCC--------------------------
Confidence 99999987 7999999974211110111 2233333332110 010
Q ss_pred CCCcceEEEEEee-eeccCC-----------ccCCCCceeeEeeeceeeecCCchhhhhhhccccccccCCCCCCCCeee
Q 008799 345 PLTVDHSLLLTMA-VAVNPC-----------ATCPNGTKVGAAMNNISFVMPTTALLQAHYYKISGVFTDDFPAKPPIAF 412 (553)
Q Consensus 345 p~~~d~~~~~~~~-~~~~~~-----------~~~~~~~~~~~~~n~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 412 (553)
.|+++.+.+. ...... ........-.+.+||+.+.
T Consensus 153 ---~d~e~~l~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~------------------------------ 199 (442)
T 2zoo_A 153 ---VDREYYLVQGDFYTKGEFGEAGLQPFDMAKAIDEDADYVVFNGSVGS------------------------------ 199 (442)
T ss_dssp ---CSEEEEEEEEEECBSSCTTCCEEECBCHHHHHTTCCSEEEETTSTTT------------------------------
T ss_pred ---CCceEEEEeeeeeccCcccccccccCChhHhccCCCCEEEECCCcCC------------------------------
Confidence 1122111110 000000 0000000001222322100
Q ss_pred ccCCCCCCccccCCCeeEEEecCCCEEEEEEEcCCCCCCCCCCeeecCCceEEEeeCCCCCCCCCCCCCCCCCCCCccee
Q 008799 413 NYTGNYTGTLQTTNGTRLYRLAYNSTVQLVLQGTTVIAPENHPTHLHGFNFFAVGKGSGNFDPNKDPQKFNLVDPVERNT 492 (553)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~i~n~~~~~~~~HP~HlHG~~f~Vl~~g~g~~~~~~~~~~~~~~~p~~rDT 492 (553)
......+.++.|++++|.|.|.+ ....|+||+||+.|.|++...+ ...|.+.|+
T Consensus 200 ------------~~~~~~l~v~~G~~vrlrliN~~--~~~~~~~~i~g~~~~vi~~DG~------------~~~p~~~~~ 253 (442)
T 2zoo_A 200 ------------TTDENSLTAKVGETVRLYIGNGG--PNLVSSFHVIGEIFDTVYVEGG------------SLKNHNVQT 253 (442)
T ss_dssp ------------TSGGGCEEEETTCEEEEEEEEEE--SSCCEEEEEETCCBSEEEGGGS------------SCEECSBSE
T ss_pred ------------CCCCCceEeCCCCEEEEEEEeCC--CCCceeeEEcCCEEEEEecCCc------------cCCCccceE
Confidence 00013468889999999999965 2467999999999999998532 123678999
Q ss_pred eEecCCcEEEEEEEecCceeeEEeecchhh-HhccceEEEEEeCCCC
Q 008799 493 ISVPTAGWTAIRFRADNPGVWFLHCHLEVH-TSWGLKMAFVVDNGKG 538 (553)
Q Consensus 493 v~vp~~g~~~irf~adnpG~w~~HCHil~H-~d~GM~~~~~V~~~~~ 538 (553)
+.|.|++...|.|++++||.|++|||...| .+.||+..|.|.....
T Consensus 254 ~~l~pg~r~~v~v~~~~~G~y~~~~~~~~~~~~~g~~a~l~v~~~~~ 300 (442)
T 2zoo_A 254 TLIPAGGAAIVEFKVEVPGTFILVDHSIFRAFNKGALAMLKVEGPDD 300 (442)
T ss_dssp EEECTTEEEEEEEECCSCEEEEEEESSTHHHHTTSCEEEEEEESCCC
T ss_pred EEECCCeeEEEEEEcCCCCeEEEEecccccccccCceEEEEecCCCC
Confidence 999999999999999999999999999999 5999999999986654
No 51
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A
Probab=99.73 E-value=9.3e-17 Score=168.94 Aligned_cols=229 Identities=16% Similarity=0.176 Sum_probs=160.9
Q ss_pred eEEEEEEEEEEEeec------------ccceeeEEEECCCCCCCeEeecCCCEEEEEEEeCCC-CCceeeeCCCcccCCC
Q 008799 23 VRHYNFTVVMTNMTK------------LCASKSIVTVNGKFPGPTLHAREDDNVIVRVTNHVK-YNVTIHWHGVRQLRTG 89 (553)
Q Consensus 23 ~~~~~l~~~~~~~~~------------~g~~~~~~~~NG~~pGP~i~v~~Gd~v~v~l~N~l~-~~~~iH~HG~~~~~~~ 89 (553)
.+++.|.+++-.... .|.....+++||+. .|.|+|++| ++|+||.|... ....+|++|....-..
T Consensus 146 ~~e~~l~l~D~~~~~~~~~~~~~~~~~~g~~~~~~~iNG~~-~p~l~v~~g-~~RlRliN~~~~~~~~~~i~gh~~~vi~ 223 (439)
T 2xu9_A 146 AEEHLLVLKDLALQGGRPAPHTPMDWMNGKEGDLVLVNGAL-RPTLVAQKA-TLRLRLLNASNARYYRLALQDHPLYLIA 223 (439)
T ss_dssp SEEEEEEEEEECEETTEECCCCHHHHHHCCCCSEEEETTEE-SCEEECSSS-EEEEEEEECCSSCCEEEEETTBCEEEEE
T ss_pred CCcEEEEEEeeeeCCCCcCCCCccccccCCCCCEEEECCcc-CCcEEecCC-eEEEEEEecCCCceEEEEECCceEEEEe
Confidence 467777776543321 13456789999997 599999999 99999999984 5678999987644321
Q ss_pred CCCCCCC-----ccCCCCCCCCceEEEEEeCCCCcceEEecChhhhh----ccc--------------eeeEE--EcCCC
Q 008799 90 WYDGPAY-----ITQCPIQPGQSYVYNFTLTGQRGTLLWHAHISWLR----ATV--------------HGAIV--ILPKR 144 (553)
Q Consensus 90 ~~DGv~~-----~tq~~i~pG~~~~y~~~~~~~~Gt~wYH~H~~~~~----~Gl--------------~G~li--V~~~~ 144 (553)
.||.+. +....|.|||+++..+++ +++|.||++++..... .|| ....+ +....
T Consensus 224 -~DG~~~~~p~~~~~l~l~pgeR~dv~v~~-~~~G~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 301 (439)
T 2xu9_A 224 -ADGGFLEEPLEVSELLLAPGERAEVLVRL-RKEGRFLLQALPYDRGAMGMMDMGGMAHAMPQGPSRPETLLYLIAPKNP 301 (439)
T ss_dssp -ETTEEEEEEEEESCEEECTTCEEEEEEEC-CSSEEEEEEEECCCCCCEEEECSSSCCEEEECCSCCCEEEEEEEECSSC
T ss_pred -cCCCCCCCceEeceEEECCceeEEEEEEc-CCCceEEEEecccccCCccccccccccccccCCCCCcceeEEEEecCCC
Confidence 688653 234568999999999998 5699999999742211 122 11222 22211
Q ss_pred CCCCCCCCC------------CcceEEEEeeeeccCHHHHHHHHHhCCCCCCCCceEEECCcCCCCCCCCCCCeEEEEEc
Q 008799 145 SVPYPFPKA------------DKEKIIVFGEWWKADVEAVINQATQMGVAPNVSDAHTINGHPGPVTNCTSQGFTLHVES 212 (553)
Q Consensus 145 ~~~~~~~~~------------~~e~~l~~~d~~~~~~~~~~~~~~~~g~~~~~~~~~~iNG~~~~~~~~~~~~~~~~v~~ 212 (553)
...+++.. ++++.+.+.. .+..|+|||+.+.. ..+.+.++.
T Consensus 302 -~~~~~p~~l~~~~~l~~~~~~r~~~l~~~~---------------------~g~~~~iNg~~~~~-----~~~~~~~~~ 354 (439)
T 2xu9_A 302 -KPLPLPKALSPFPTLPAPVVTRRLVLTEDM---------------------MAARFFINGQVFDH-----RRVDLKGQA 354 (439)
T ss_dssp -CCCCCCSCCCCCCCCCCCSEEEEEEEEEEG---------------------GGTEEEETTBCCCT-----TCCCEEECT
T ss_pred -ccccCcccCCCcccCCCCCcceEEEEEeec---------------------cCceEeECCEECCC-----CCCceecCC
Confidence 11111110 0111111110 01368999997632 114589999
Q ss_pred CCEEEEEEEecCCCceEEEEEcCceEEEEeeCCCcc-cceEeeEEEeCCCccEEEEEEeCCCCCeeEEEEeec
Q 008799 213 GKTYLLRIVNAAVNDELFFKIAGHNLTVVEVDSSYT-KPFKTDTIFIGPGQTTNALLTADKKIGKYLITISPF 284 (553)
Q Consensus 213 G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~-~p~~~d~~~l~pgeR~dv~v~~~~~~g~~~i~~~~~ 284 (553)
|++++|+|.|.+...|. ||||||.|+|++.+|... .|.+.|++.|.||+++.|.+++++ ||.|.+|||..
T Consensus 355 g~~~~~~~~N~~~~~HP-~HLHG~~F~Vl~~~g~~~~~p~~rDTv~v~p~~~v~i~f~adn-pG~w~~HCHil 425 (439)
T 2xu9_A 355 QTVEVWEVENQGDMDHP-FHLHVHPFQVLSVGGRPFPYRAWKDVVNLKAGEVARLLVPLRE-KGRTVFHCHIV 425 (439)
T ss_dssp TCEEEEEEEECSSSCEE-EEESSCCBEEEEETTEECSSCCCBSEEEECTTCEEEEEEECCS-CEEEEEEESSH
T ss_pred CCEEEEEEEcCCCCCCC-ceeCCCcEEEEeeCCCCCCCCCCeEEEEeCCCCEEEEEEEcCC-CCCEEEECCcc
Confidence 99999999999865555 999999999999999876 688999999999999999999887 79999999953
No 52
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A
Probab=99.73 E-value=1.9e-16 Score=166.89 Aligned_cols=223 Identities=14% Similarity=0.173 Sum_probs=151.2
Q ss_pred eEEEEEEEEEEEeecc-----------cceeeEEEECCCCCCCeEeecCCCEEEEEEEeCCC-CCceeee-CCCcccCCC
Q 008799 23 VRHYNFTVVMTNMTKL-----------CASKSIVTVNGKFPGPTLHAREDDNVIVRVTNHVK-YNVTIHW-HGVRQLRTG 89 (553)
Q Consensus 23 ~~~~~l~~~~~~~~~~-----------g~~~~~~~~NG~~pGP~i~v~~Gd~v~v~l~N~l~-~~~~iH~-HG~~~~~~~ 89 (553)
.+++.|.+++-....+ +.....+++||+. .|+|+|++| ++|+||.|... ....+|+ ||....-..
T Consensus 152 ~~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~d~~liNG~~-~p~~~v~~g-~~RlRliNa~~~~~~~~~i~dg~~~~vi~ 229 (451)
T 2uxt_A 152 VDDFPVIIQDKRLDNFGTPEYNEPGSGGFVGDTLLVNGVQ-SPYVEVSRG-WVRLRLLNASNSRRYQLQMNDGRPLHVIS 229 (451)
T ss_dssp TTEEEEEEEEEEECTTSCEECCCCSSSCCCCSEEEETTEE-SCEEEECSS-EEEEEEEECCSSCCEEEEETTSCCEEEEE
T ss_pred CceEEEEEEeeecCCCCceecccccCCCCcCCEEEECCcc-cceEEecCC-EEEEEEEccCCceeEEEEECCCCeEEEEE
Confidence 4567777776554332 3345789999996 599999999 99999999984 5678999 786543221
Q ss_pred CCCCCCC-----ccCCCCCCCCceEEEEEeCCCCcceEEecChhhhhccc-e-----------eeEE-EcCCCCCC---C
Q 008799 90 WYDGPAY-----ITQCPIQPGQSYVYNFTLTGQRGTLLWHAHISWLRATV-H-----------GAIV-ILPKRSVP---Y 148 (553)
Q Consensus 90 ~~DGv~~-----~tq~~i~pG~~~~y~~~~~~~~Gt~wYH~H~~~~~~Gl-~-----------G~li-V~~~~~~~---~ 148 (553)
.||.+. +.+..|.||||+++.+++ .+.|+||++++......|+ . .+++ ........ .
T Consensus 230 -~DG~~~~~P~~~~~l~l~pgeR~dvlv~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~ 307 (451)
T 2uxt_A 230 -GDQGFLPAPVSVKQLSLAPGERREILVDM-SNGDEVSITCGEAASIVDRIRGFFEPSSILVSTLVLTLRPTGLLPLVTD 307 (451)
T ss_dssp -CSSSEEEEEEEESSEEECTTCEEEEEEEC-TTCCCEEEEC----------------CCCCSCCEEEEEEECSCCC----
T ss_pred -eCCCccCCceEeceEEECceeEEEEEEEe-CCCCEEEEEecCccccccccccccccCCCCCCcceEEEEecCCCcCccc
Confidence 798642 445779999999999998 5689999999864432221 1 1111 11110000 0
Q ss_pred CCCC-----------CCcceEEEEeeeeccCHHHHHHHHHhCCCCCCCCceEEECCcCCCCCCCCCCCeEEEEEcCCEEE
Q 008799 149 PFPK-----------ADKEKIIVFGEWWKADVEAVINQATQMGVAPNVSDAHTINGHPGPVTNCTSQGFTLHVESGKTYL 217 (553)
Q Consensus 149 ~~~~-----------~~~e~~l~~~d~~~~~~~~~~~~~~~~g~~~~~~~~~~iNG~~~~~~~~~~~~~~~~v~~G~~~r 217 (553)
.++. .+.+..+.+. ..|+|||+.++. ..+.+.++.|++++
T Consensus 308 ~~p~~L~~~~~~~~~~~~~~~~~l~------------------------~~~~iNg~~f~~-----~~~~~~~~~G~~~~ 358 (451)
T 2uxt_A 308 SLPMRLLPTEIMAGSPIRSRDISLG------------------------DDPGINGQLWDV-----NRIDVTAQQGTWER 358 (451)
T ss_dssp CCCSCSSSSCCCCCCCSEEEEEEEC------------------------SSSSBTTBCCCT-----TCCCEEEETTCEEE
T ss_pred cCccccCCCCCCCCCCcceEEEEEe------------------------eEEEECCEeCCC-----CCCcEEcCCCCEEE
Confidence 0000 0000000000 047899997632 12568999999999
Q ss_pred EEEEecCCCceEEEEEcCceEEEEeeCCCcc---cceEeeEEEeCCCccEEEEEEeCCCCCe----eEEEEeec
Q 008799 218 LRIVNAAVNDELFFKIAGHNLTVVEVDSSYT---KPFKTDTIFIGPGQTTNALLTADKKIGK----YLITISPF 284 (553)
Q Consensus 218 lRliN~~~~~~~~~~i~gh~~~via~DG~~~---~p~~~d~~~l~pgeR~dv~v~~~~~~g~----~~i~~~~~ 284 (553)
|+|+|. ..+-||||||.|+|++.||... +|.+.|++.| |+++.|.+++++ ||. |.+|||..
T Consensus 359 ~~l~N~---~~HP~HLHGh~F~Vl~~~G~~~~~~~p~~rDTv~v--g~~~~i~~~~dn-pg~~~g~w~~HCHil 426 (451)
T 2uxt_A 359 WTVRAD---EPQAFHIEGVMFQIRNVNGAMPFPEDRGWKDTVWV--DGQVELLVYFGQ-PSWAHFPFYFNSQTL 426 (451)
T ss_dssp EEEEEE---EEEEEEETTCEEEEEEETTBCCCGGGSSCBSEEEE--EEEEEEEEECCS-CCBTTBCEEEEESSH
T ss_pred EEEECC---CCcCeEECCceEEEEeeCCcCCCcccCCCccEEEE--CCEEEEEEEeCC-CCCCCCceEEeCCch
Confidence 999998 3566999999999999999865 4788999999 999999999987 566 99999953
No 53
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3
Probab=99.65 E-value=6.5e-15 Score=157.95 Aligned_cols=236 Identities=17% Similarity=0.200 Sum_probs=150.5
Q ss_pred eeEEEECCCCC---------CCeEeecCCCEEEEEEEeCCC-CCceeeeCCCcccCCCCCCCCCC----ccCCCCCCCCc
Q 008799 42 KSIVTVNGKFP---------GPTLHAREDDNVIVRVTNHVK-YNVTIHWHGVRQLRTGWYDGPAY----ITQCPIQPGQS 107 (553)
Q Consensus 42 ~~~~~~NG~~p---------GP~i~v~~Gd~v~v~l~N~l~-~~~~iH~HG~~~~~~~~~DGv~~----~tq~~i~pG~~ 107 (553)
...+++||+.. -|+|+|++|+++|+||.|... ....+|++|....-.. .||.+. +....|.||||
T Consensus 191 ~d~~liNG~~~~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~vi~-~DG~~~~p~~~~~l~l~pgqR 269 (521)
T 1v10_A 191 PDTTLINGLGRNSANPSAGQLAVVSVQSGKRYRFRIVSTSCFPNYAFSIDGHRMTVIE-VDGVSHQPLTVDSLTIFAGQR 269 (521)
T ss_dssp CSEEEETTBCCCSSCGGGSCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEE-ETTEEEEEEEESBEEECTTCE
T ss_pred CCEEEECCcccCCCCCCCCCceEEEECCCCEEEEEEEecCCcccEEEEECCCeEEEEe-cCCccccceeeeeEEEcccce
Confidence 46789999853 189999999999999999985 5678888887643321 688542 23456899999
Q ss_pred eEEEEEeCCCCcceEEecChhhh----hccceeeEEEcCCCCCCCCCCCCCcceEEEEeeeecc---C-HHHHHH-H---
Q 008799 108 YVYNFTLTGQRGTLLWHAHISWL----RATVHGAIVILPKRSVPYPFPKADKEKIIVFGEWWKA---D-VEAVIN-Q--- 175 (553)
Q Consensus 108 ~~y~~~~~~~~Gt~wYH~H~~~~----~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~---~-~~~~~~-~--- 175 (553)
++..+++++.+|+||.+++.... ..|+..+++.........+.........+--.+.... . ...... .
T Consensus 270 ~dvlv~~~~~~g~y~i~~~~~~~~~~~~~~~~~ail~y~~~~~~~p~~~~~~~~~~~~~~l~p~~~~~~p~~~~~~~~~~ 349 (521)
T 1v10_A 270 YSVVVEANQAVGNYWIRANPSNGRNGFTGGINSAIFRYQGAAVAEPTTSQNSGTALNEANLIPLINPGAPGNPVPGGADI 349 (521)
T ss_dssp EEEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTCCSCCCCCCCCCSCBCCGGGCCBSSCCCCSSCSSTTCSSE
T ss_pred EEEEEEcCCCCCceeeeeccccccccCCCCceeEEEEECCCCCCCCCCCCCcccccchhhcccCCcccCCCcccCCcceE
Confidence 99999985557999999975421 1344344444322111101000000000000000000 0 000000 0
Q ss_pred --HHhCCCCCCCCceEEECCcCCCCCCC----------------CCCCeEEEEEcCCEEEEEEEecCCCceEEEEEcCce
Q 008799 176 --ATQMGVAPNVSDAHTINGHPGPVTNC----------------TSQGFTLHVESGKTYLLRIVNAAVNDELFFKIAGHN 237 (553)
Q Consensus 176 --~~~~g~~~~~~~~~~iNG~~~~~~~~----------------~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~ 237 (553)
.+..+... ....|+|||+.+..... ....+.+.++.|++++++++| ... +-||||||.
T Consensus 350 ~~~l~~~~~~-~~~~~~iNg~~~~~~~~P~l~~~~~g~~~~~~~~~~~~~~~v~~g~~vei~l~N--~~~-HP~HLHGh~ 425 (521)
T 1v10_A 350 NLNLRIGRNA-TTADFTINGAPFIPPTVPVLLQILSGVTNPNDLLPGGAVISLPANQVIEISIPG--GGN-HPFHLHGHN 425 (521)
T ss_dssp EEECCEECCS-SSSCCEESSCCCCCCSSCHHHHHHHTCCCGGGSSSTTTEEEECTTCEEEEEEEC--CBS-CEEEESSCC
T ss_pred EEEEEEecCC-ceeEEEECCCcccCCCCchhhhhhcCCcccccCCCCceEEEecCCCEEEEEEcC--CCC-CCEEEccce
Confidence 00000000 01268899998632100 011267899999999999999 344 449999999
Q ss_pred EEEEeeCCCc----ccceEeeEEEe-CCCccEEEEEEeCCCCCeeEEEEee
Q 008799 238 LTVVEVDSSY----TKPFKTDTIFI-GPGQTTNALLTADKKIGKYLITISP 283 (553)
Q Consensus 238 ~~via~DG~~----~~p~~~d~~~l-~pgeR~dv~v~~~~~~g~~~i~~~~ 283 (553)
|+|++.+|.. ..|.+.|++.| .||+++.|.+++++ ||.|.+|||.
T Consensus 426 F~Vl~~~~~~~~n~~~p~~rDTV~V~p~gg~v~Irf~aDN-PG~W~~HCHi 475 (521)
T 1v10_A 426 FDVVRTPGSSVYNYVNPVRRDVVSIGGGGDNVTFRFVTDN-PGPWFLHCHI 475 (521)
T ss_dssp EEEEECTTCSCCCCSSCCEESEEECCBSSCEEEEEEECCS-CEEEEEEESC
T ss_pred EEEEecCCCCccccCCCCeeeeEEeCCCCcEEEEEEEeCC-CeeEEEeeCh
Confidence 9999999875 25889999999 79999999999997 7999999995
No 54
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A*
Probab=99.65 E-value=9.5e-15 Score=156.09 Aligned_cols=256 Identities=15% Similarity=0.127 Sum_probs=158.6
Q ss_pred EEEEEEEEEEeecccc-----eeeEEEECCCCC--------CCeEeecCCCEEEEEEEeCCC-CCceeeeCCCcccCCCC
Q 008799 25 HYNFTVVMTNMTKLCA-----SKSIVTVNGKFP--------GPTLHAREDDNVIVRVTNHVK-YNVTIHWHGVRQLRTGW 90 (553)
Q Consensus 25 ~~~l~~~~~~~~~~g~-----~~~~~~~NG~~p--------GP~i~v~~Gd~v~v~l~N~l~-~~~~iH~HG~~~~~~~~ 90 (553)
++.|.+++-....++. ....+++||+.. .|+|+|++|+++|+||.|... ....+|++|....-. .
T Consensus 143 e~~l~l~Dw~~~~~~~~~~~~~~d~~liNG~~~~~~~~~~~~~~~~v~~g~~~RlRliN~~~~~~~~~~i~gh~~~vi-~ 221 (503)
T 1hfu_A 143 NTIITLADWYHIPAPSIQGAAQPDATLINGKGRYVGGPAAELSIVNVEQGKKYRMRLISLSCDPNWQFSIDGHELTII-E 221 (503)
T ss_dssp TSEEEEEEECSSCGGGCC---CCSEEEETTBCCBTTCCCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEE-E
T ss_pred eEEEEEcccccCChHHhcCCCCCCEEEECcccccCCCCCCcceEEEEcCCCEEEEEEEecCCcccEEEEEcCceEEEE-e
Confidence 4556665544333332 356789999863 289999999999999999984 567888888764332 1
Q ss_pred CCCCCC----ccCCCCCCCCceEEEEEeCCCCcceEEecChhh--------hhccceeeEEEcCCCCCCCCCCC-CCcce
Q 008799 91 YDGPAY----ITQCPIQPGQSYVYNFTLTGQRGTLLWHAHISW--------LRATVHGAIVILPKRSVPYPFPK-ADKEK 157 (553)
Q Consensus 91 ~DGv~~----~tq~~i~pG~~~~y~~~~~~~~Gt~wYH~H~~~--------~~~Gl~G~liV~~~~~~~~~~~~-~~~e~ 157 (553)
.||.+. +....|.||||++..+++++.+|+||.+++... ...|+..+++.........|... .....
T Consensus 222 ~DG~~~~p~~~~~l~l~pgeR~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~p~~~~~~~~~ 301 (503)
T 1hfu_A 222 VDGELTEPHTVDRLQIFTGQRYSFVLDANQPVDNYWIRAQPNKGRNGLAGTFANGVNSAILRYAGAANADPTTSANPNPA 301 (503)
T ss_dssp ETTEEEEEEEESBEEECTTCEEEEEEECCSCSSEEEEEEEESSCGGGGGGCCGGGTTEEEEEETTSCSSCCCCCCCSSCC
T ss_pred ccCccccccccCeEEEcccceEEEEEEcCCCccceeeeeccccCCcccccccCCCceEEEEEECCCCCCCCCCCCCCccC
Confidence 688642 223558999999999998555899999987431 11234334443322111101000 00000
Q ss_pred EEEEeeeeccCHHHHHH-----H---HHhCCCCCCCCceEEECCcCCCCCCC----------------CCCCeEEEEEcC
Q 008799 158 IIVFGEWWKADVEAVIN-----Q---ATQMGVAPNVSDAHTINGHPGPVTNC----------------TSQGFTLHVESG 213 (553)
Q Consensus 158 ~l~~~d~~~~~~~~~~~-----~---~~~~g~~~~~~~~~~iNG~~~~~~~~----------------~~~~~~~~v~~G 213 (553)
.+--.+........... . ...-... .....|+|||+.+..-.- ......++++.|
T Consensus 302 ~l~~~~l~p~~~~~~p~~~~~~~~~~~~~l~~~-~~~~~~~iNg~~~~~~~~P~l~~~~~g~~~~~~~~~~~~~~~v~~g 380 (503)
T 1hfu_A 302 QLNEADLHALIDPAAPGIPTPGAADVNLRFQLG-FSGGRFTINGTAYESPSVPTLLQIMSGAQSANDLLPAGSVYELPRN 380 (503)
T ss_dssp BCCGGGCBBSSSCSCSSCSSTTCSSEEEECCEE-EETTEEEETTBCCCCCSSCHHHHHHTTCCSGGGSSSTTSEEEECSS
T ss_pred CCccccccccCccCCCCcccCCcceEEEEEEee-ccCceEEECCCccCCCCCcchhhhhcCCcccccCCCCceEEEccCC
Confidence 00000000000000000 0 0000000 011268999998632100 011267899999
Q ss_pred CEEEEEEEecCCCceEEEEEcCceEEEEeeCCCcc----cceEeeEEEe-CCCccEEEEEEeCCCCCeeEEEEee
Q 008799 214 KTYLLRIVNAAVNDELFFKIAGHNLTVVEVDSSYT----KPFKTDTIFI-GPGQTTNALLTADKKIGKYLITISP 283 (553)
Q Consensus 214 ~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~----~p~~~d~~~l-~pgeR~dv~v~~~~~~g~~~i~~~~ 283 (553)
++++++++|......+-||||||.|+|++.+|... .|.+.|++.| .||+++.|.+++++ ||.|.+|||.
T Consensus 381 ~~vei~l~~n~~~~~HP~HLHGh~F~Vl~~~~~~~~n~~~p~~rDTV~V~ppg~~v~irf~adn-PG~W~~HCHi 454 (503)
T 1hfu_A 381 QVVELVVPAGVLGGPHPFHLHGHAFSVVRSAGSSTYNFVNPVKRDVVSLGVTGDEVTIRFVTDN-PGPWFFHCHI 454 (503)
T ss_dssp CEEEEEEECCSTTCCCEEEETTCCEEEEECTTCCCCCCSSBCEESEEECCSTTCEEEEEEECCS-CEEEEEEESS
T ss_pred CEEEEEEECCCCCCCCCEEEecceEEEEecCCCCccccCCCCeeeeEEecCCCceEEEEEEcCC-CeeeeEecCc
Confidence 99999999543344555999999999999998752 5889999999 89999999999997 7999999995
No 55
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp}
Probab=99.61 E-value=2.2e-14 Score=151.34 Aligned_cols=239 Identities=13% Similarity=0.148 Sum_probs=157.0
Q ss_pred EEEEEEEEEEEeeccc-------------ceeeEEEECCCCCCCeEeecCCCEEEEEEEeCC-CCCceeeeCCCcccCCC
Q 008799 24 RHYNFTVVMTNMTKLC-------------ASKSIVTVNGKFPGPTLHAREDDNVIVRVTNHV-KYNVTIHWHGVRQLRTG 89 (553)
Q Consensus 24 ~~~~l~~~~~~~~~~g-------------~~~~~~~~NG~~pGP~i~v~~Gd~v~v~l~N~l-~~~~~iH~HG~~~~~~~ 89 (553)
++| |.++.-....+| .....+++||+. .|+|.|++|+ |+||.|.. .....+|++|....-.
T Consensus 181 ~~~-l~l~D~~~~~~g~~~~~~~~~~~~g~~gd~~lvNG~~-~p~l~v~~g~--RlRliNa~~~~~~~l~i~g~~~~vI- 255 (481)
T 3zx1_A 181 EKD-LMISDLRLDENAQIPNNNLNDWLNGREGEFVLINGQF-KPKIKLATNE--RIRIYNATAARYLNLRIQGAKFILV- 255 (481)
T ss_dssp EEE-EEEEEECCBTTSCCCCCCHHHHHHCCCCSEEEETTEE-SCEEEEETTE--EEEEEECCSSCCEEEEETTCEEEEE-
T ss_pred cee-EEEEEEeccCCCccccccchhhccCCcCCEEEECCcc-CceEEecCCC--EEEEEecCCCeEEEEEECCCceEEE-
Confidence 455 666665544433 245789999997 4999999999 99999998 5678899988764332
Q ss_pred CCCCCCC-----ccCCCCCCCCceEEEEEeCCCCcceEEecChhhhh---------ccceeeEEEcCCC-CCC------C
Q 008799 90 WYDGPAY-----ITQCPIQPGQSYVYNFTLTGQRGTLLWHAHISWLR---------ATVHGAIVILPKR-SVP------Y 148 (553)
Q Consensus 90 ~~DGv~~-----~tq~~i~pG~~~~y~~~~~~~~Gt~wYH~H~~~~~---------~Gl~G~liV~~~~-~~~------~ 148 (553)
..||... +....|.||||++..++. .+.|+|..-++..... ....--+-+.... ..+ .
T Consensus 256 a~DGg~~~~P~~~~~l~l~pgeR~dvlv~~-~~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~lP~~l~~~~ 334 (481)
T 3zx1_A 256 GTDGGLIEKTIYKEELFLSPASRVEVLIDA-PKDGNFKLESAYYDRDKMMVKEEPNTLFLANINLKKENVELPKNLKIFK 334 (481)
T ss_dssp EETTEEEEEEEEESSEEECTTCEEEEEEEC-SSCEEEEEEECCCCCCCSSCCCCCCCEEEEEEEEECCCCCCCSCSCCCC
T ss_pred EcCCCccCCceEeCeEEECCccEEEEEEEc-CCCcEEEEEEecccccCccccCCCCceeEEEEecCCCCccCCccccCCC
Confidence 2687321 234668999999999998 5678877766532110 0000111121111 000 0
Q ss_pred CCCCCCcceEEEEeeeecc-------CHHHHHHHHHhCCCCCCCCceEEECCcCCCCCCCCCCCeEEEEEcCCEEEEEEE
Q 008799 149 PFPKADKEKIIVFGEWWKA-------DVEAVINQATQMGVAPNVSDAHTINGHPGPVTNCTSQGFTLHVESGKTYLLRIV 221 (553)
Q Consensus 149 ~~~~~~~e~~l~~~d~~~~-------~~~~~~~~~~~~g~~~~~~~~~~iNG~~~~~~~~~~~~~~~~v~~G~~~rlRli 221 (553)
+.+..+....+.++..... ........ + ...|+|||+.+.. ..+.++++.|++++|+|+
T Consensus 335 ~~~~~~~~r~~~l~~~~~~~~~~~~~~~~~~~~~-~--------~~~~~iNG~~~~~-----~~~~~~~~~G~~v~w~l~ 400 (481)
T 3zx1_A 335 PSEEPKEFKEIIMSEDHMQMHGMMGKSEGELKIA-L--------ASMFLINRKSYDL-----KRIDLSSKLGVVEDWIVI 400 (481)
T ss_dssp CCCCCCEEEEEEEEECCSTTTTGGGCCHHHHHHH-H--------HTTEEETTBCCCT-----TCCCEEEETTCCEEEEEE
T ss_pred CCCCCCcEEEEEEeccchhccccccccccccccc-c--------cceeEECCEeCCC-----CCceEEeCCCCEEEEEEE
Confidence 0111223333444321100 00000000 0 1359999997631 126799999999999999
Q ss_pred ecCCCceEEEEEcCceEEEEee--CCCcc---cceEeeEEEeCCCccEEEEEEeCCCCCeeEEEEeec
Q 008799 222 NAAVNDELFFKIAGHNLTVVEV--DSSYT---KPFKTDTIFIGPGQTTNALLTADKKIGKYLITISPF 284 (553)
Q Consensus 222 N~~~~~~~~~~i~gh~~~via~--DG~~~---~p~~~d~~~l~pgeR~dv~v~~~~~~g~~~i~~~~~ 284 (553)
|.+.. .+.||||||+|+|++. +|... ++.++|++.|.||+++.|.+++++ ||.|.+|||..
T Consensus 401 N~~~~-~Hp~HlHG~~F~vl~~~~~g~~~~~~~~~~kDTv~v~Pg~~~~i~~~~d~-pG~w~~HCHil 466 (481)
T 3zx1_A 401 NKSHM-DHPFHIHGTQFELISSKLNGKVQKAEFRALRDTINVRPNEELRLRMKQDF-KGLRMYHCHIL 466 (481)
T ss_dssp ECSSS-CEEEEETTCCEEEEEEEETTEEEECSSCCEESEEEECTTCEEEEEECCCS-CEEEEEEESSH
T ss_pred cCCCC-ceeEEEeccEEEEEEecccCCCCCcccCcccceEEECCCCEEEEEEEcCC-CeeEEEEcCCh
Confidence 98754 5559999999999999 99765 367899999999999999999986 79999999953
No 56
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A*
Probab=99.58 E-value=1.2e-13 Score=146.55 Aligned_cols=239 Identities=17% Similarity=0.175 Sum_probs=148.9
Q ss_pred eeeEEEECCCC---------CCCeEeecCCCEEEEEEEeCC-CCCceeeeCCCcccCCCCCCCCCC----ccCCCCCCCC
Q 008799 41 SKSIVTVNGKF---------PGPTLHAREDDNVIVRVTNHV-KYNVTIHWHGVRQLRTGWYDGPAY----ITQCPIQPGQ 106 (553)
Q Consensus 41 ~~~~~~~NG~~---------pGP~i~v~~Gd~v~v~l~N~l-~~~~~iH~HG~~~~~~~~~DGv~~----~tq~~i~pG~ 106 (553)
....+++||+- +-|.|+|++|+++|+||.|.. .....+|++|....-.. .||.+- +....|.|||
T Consensus 167 ~~d~~liNG~g~~~~~~~~~~~~~~~v~~G~~~RlRliN~~~~~~~~~~i~gh~~~via-~DG~~~~P~~~~~l~i~pGq 245 (495)
T 3t6v_A 167 TADSTLIDGLGRTHVNVAAVPLSVITVEVGKRYRMRLVSISCDPNYDFSIDGHDMTIIE-TDGVDSQELTVDEIQIFAAQ 245 (495)
T ss_dssp CCSEEEETTBCCBSSSCCCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEE-ETTEEEEEEEESBEEECTTC
T ss_pred CCcEEEECCcCcCCCCcccCCceEEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEEEE-eCCcccCCEEeeeEEEcCce
Confidence 45789999973 237999999999999999987 45677888886633221 688542 2235689999
Q ss_pred ceEEEEEeCCCCcceEEecChhhh----hccceeeEEEcCCCCCCCCCCCCCc-ceEEEEeeeeccCHHHH-HHHHHhCC
Q 008799 107 SYVYNFTLTGQRGTLLWHAHISWL----RATVHGAIVILPKRSVPYPFPKADK-EKIIVFGEWWKADVEAV-INQATQMG 180 (553)
Q Consensus 107 ~~~y~~~~~~~~Gt~wYH~H~~~~----~~Gl~G~liV~~~~~~~~~~~~~~~-e~~l~~~d~~~~~~~~~-~~~~~~~g 180 (553)
|++..+++++.+|.||.++..... ..|...+++.........|...... ... .+.+......... .......+
T Consensus 246 R~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~ail~Y~~~~~~~p~~~~~~~~~~-~~~~~~L~p~~~~~~p~~~~~~ 324 (495)
T 3t6v_A 246 RYSFVLNANQPVGNYWIRANPNSGGEGFDGGINSAILRYDGATTADPVTVASTVHTK-CLIETDLHPLSRNGVPGNPHQG 324 (495)
T ss_dssp EEEEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTSCSSCCCCCCCSSCSS-BCCGGGCCBSSCCCCSSCSSTT
T ss_pred EEEEEEECCCCCceEEEEEecccCccccCCCceEEEEEECCCCCCCCCCCCCCCCcc-ccccccccccccccCCCccCCC
Confidence 999999986667999999764211 1233334444332211111000000 000 0000000000000 00000000
Q ss_pred CC--------CCCCceEEECCcCCCCCCC----------------CCCCeEEEEEcCCEEEEEEE-ecCCCceEEEEEcC
Q 008799 181 VA--------PNVSDAHTINGHPGPVTNC----------------TSQGFTLHVESGKTYLLRIV-NAAVNDELFFKIAG 235 (553)
Q Consensus 181 ~~--------~~~~~~~~iNG~~~~~~~~----------------~~~~~~~~v~~G~~~rlRli-N~~~~~~~~~~i~g 235 (553)
.. ......|+|||+.+..... .....++.++.|++++|.|. |.+. ..+-|||||
T Consensus 325 ~~d~~~~l~~~~~~~~w~iNg~s~~~~~~P~L~~~~~g~~~~~~~~~~~~v~~~~~g~~V~ivl~~n~~~-~~HP~HLHG 403 (495)
T 3t6v_A 325 GADCNLNLSLGFACGNFVINGVSFTPPTVPVLLQICSGANTAADLLPSGSVISLPSNSTIEIALPAGAAG-GPHPFHLHG 403 (495)
T ss_dssp CSSEEEECCEEEETTEEEETTBCCCCCSSCHHHHHHTTCCSSTTSSSTTSEEEECTTCEEEEEEECCSSS-CCCEEEETT
T ss_pred CCcEEEEEEEEecCcEEEEcCEecCCCCCcchhhhhcCCcCcccccCCcceEEecCCCEEEEEEccCCCC-CCcceeecC
Confidence 00 0011368999987632110 00125789999999999998 5554 445599999
Q ss_pred ceEEEEeeCCCcc----cceEeeEEEeCC-CccEEEEEEeCCCCCeeEEEEee
Q 008799 236 HNLTVVEVDSSYT----KPFKTDTIFIGP-GQTTNALLTADKKIGKYLITISP 283 (553)
Q Consensus 236 h~~~via~DG~~~----~p~~~d~~~l~p-geR~dv~v~~~~~~g~~~i~~~~ 283 (553)
|.|+|++.+|... .|...|++.|.+ |+.+.|.+++++ ||.|.+|||.
T Consensus 404 h~F~vl~~~g~~~~n~~~P~~rDtv~v~~~g~~~~irf~adn-PG~W~~HCHi 455 (495)
T 3t6v_A 404 HDFAVSESASNSTSNYDDPIWRDVVSIGGVGDNVTIRFCTDN-PGPWFLHCHI 455 (495)
T ss_dssp CCEEEEECTTCCCCCSSSCCEESEEECCSTTCEEEEEEECCS-CEEEEEEESC
T ss_pred CcEEEEecCCCCCcccCCCCCccEEEcCCCCcEEEEEEEcCC-CeeEEEEecc
Confidence 9999999988653 588999999997 999999999997 7999999995
No 57
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae}
Probab=99.57 E-value=2.6e-13 Score=145.67 Aligned_cols=222 Identities=14% Similarity=0.167 Sum_probs=146.6
Q ss_pred eeEEEECCCCCCCeEeecCCCEEEEEEEeCCC-CCceeeeCCCcccCCCCCCCCCC----ccCCCCCCCCceEEEEEeCC
Q 008799 42 KSIVTVNGKFPGPTLHAREDDNVIVRVTNHVK-YNVTIHWHGVRQLRTGWYDGPAY----ITQCPIQPGQSYVYNFTLTG 116 (553)
Q Consensus 42 ~~~~~~NG~~pGP~i~v~~Gd~v~v~l~N~l~-~~~~iH~HG~~~~~~~~~DGv~~----~tq~~i~pG~~~~y~~~~~~ 116 (553)
...+++||+. .|+|+|++|+++|+||.|... ....+|.+|....-.. .||.+. +....|.||||++..+++++
T Consensus 167 ~d~~liNG~~-~~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~vi~-~DG~~~~P~~~~~l~l~~gqR~dvlv~~~~ 244 (534)
T 1zpu_A 167 PQNLIVNNTM-NLTWEVQPDTTYLLRIVNVGGFVSQYFWIEDHEMTVVE-IDGITTEKNVTDMLYITVAQRYTVLVHTKN 244 (534)
T ss_dssp CSEEEETTBS-SCEEECCSSCEEEEEEEECCSSCCEEEEETTBCEEEEE-ETTEEEEEEEESCEEECTTCEEEEEEECCS
T ss_pred CceEEECCCC-ceEEEEECCCEEEEEEEeccCCceEEEEEcCCeeEEEe-ccCcCccccEeceEEECccceEEEEEEcCC
Confidence 4688999996 599999999999999999984 5677888876543221 688543 22356899999999999843
Q ss_pred C-CcceEEecChhhhh-------cccee-eEEEcCCCC-CCCC-----CC------------------CCCcceEEEEee
Q 008799 117 Q-RGTLLWHAHISWLR-------ATVHG-AIVILPKRS-VPYP-----FP------------------KADKEKIIVFGE 163 (553)
Q Consensus 117 ~-~Gt~wYH~H~~~~~-------~Gl~G-~liV~~~~~-~~~~-----~~------------------~~~~e~~l~~~d 163 (553)
. .|.||......... ..... +++...... .+.+ ++ ..++.+.+.+.-
T Consensus 245 ~~~~~y~i~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~~p~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~l~~~~ 324 (534)
T 1zpu_A 245 DTDKNFAIMQKFDDTMLDVIPSDLQLNATSYMVYNKTAALPTQNYVDSIDNFLDDFYLQPYEKEAIYGEPDHVITVDVVM 324 (534)
T ss_dssp CSSCCEEEEEEECGGGSSSCCTTCCCEEEEEEESCTTSCBCCCCCCSCSSCSCCGGGCCBSSCCCCCCSCSEEEEEEEEE
T ss_pred CCCCcEEEEEeccccccccCCCCCCcceEEEEEeCCCCCCCCCCcccccccccccccceeCCCCCCCCCCCeEEEEEEEe
Confidence 3 57999987643211 01111 222222111 0000 00 011111111110
Q ss_pred eeccCHHHHHHHHHhCCCCCCCCceEEECCcCCCCCCC--------------C-----CCCeEEEEEcCCEEEEEEEecC
Q 008799 164 WWKADVEAVINQATQMGVAPNVSDAHTINGHPGPVTNC--------------T-----SQGFTLHVESGKTYLLRIVNAA 224 (553)
Q Consensus 164 ~~~~~~~~~~~~~~~~g~~~~~~~~~~iNG~~~~~~~~--------------~-----~~~~~~~v~~G~~~rlRliN~~ 224 (553)
.. .......++|||+.+..... + .....+.++.|++++|.|.|.+
T Consensus 325 --------------~~--~~~~~~~~~iNg~s~~~~~~P~L~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~ivi~N~~ 388 (534)
T 1zpu_A 325 --------------DN--LKNGVNYAFFNNITYTAPKVPTLMTVLSSGDQANNSEIYGSNTHTFILEKDEIVEIVLNNQD 388 (534)
T ss_dssp --------------EE--CTTSCEEEEETTBCCCCCSSCHHHHHTTSGGGTTCGGGGCSSSCEEEECTTCEEEEEEEECS
T ss_pred --------------ec--cCCceeEEEECCCcccCCCCCceeeecccCcccCCCcccCCCceEEEeCCCCEEEEEEeCCC
Confidence 00 00112468899997532100 0 0014689999999999999998
Q ss_pred CCceEEEEEcCceEEEEeeCCC-----------c---------ccceEeeEEEeCCCccEEEEEEeCCCCCeeEEEEee
Q 008799 225 VNDELFFKIAGHNLTVVEVDSS-----------Y---------TKPFKTDTIFIGPGQTTNALLTADKKIGKYLITISP 283 (553)
Q Consensus 225 ~~~~~~~~i~gh~~~via~DG~-----------~---------~~p~~~d~~~l~pgeR~dv~v~~~~~~g~~~i~~~~ 283 (553)
...|. ||||||.|+|++.++. + ..|.+.|++.|.||+.+.|.+++++ ||.|.+|||.
T Consensus 389 ~~~HP-~HLHGh~F~Vl~~~~~~~~~~~G~p~~~~~~~~~~~~~~p~~RDTv~V~pgg~v~IrF~aDN-PG~W~~HCHi 465 (534)
T 1zpu_A 389 TGTHP-FHLHGHAFQTIQRDRTYDDALGEVPHSFDPDNHPAFPEYPMRRDTLYVRPQSNFVIRFKADN-PGVWFFHCHI 465 (534)
T ss_dssp SSCEE-EEETTCCEEEEEECCCCCGGGTCCCCCCBTTBCCCCCSSCEEESEEEECTTCEEEEEEECCS-CEEEEEEECC
T ss_pred CCCCC-eEecCCceEEEeecCCccccccCcccccCccccccccCCCCeeeEEEeCCCCEEEEEEEeCC-CeeEEEEeCc
Confidence 65554 9999999999998853 1 2477899999999999999999997 7999999995
No 58
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A*
Probab=99.55 E-value=2.8e-13 Score=143.77 Aligned_cols=239 Identities=15% Similarity=0.139 Sum_probs=147.6
Q ss_pred eeeEEEECCCC--------CCCeEeecCCCEEEEEEEeCC-CCCceeeeCCCcccCCCCCCCCCC----ccCCCCCCCCc
Q 008799 41 SKSIVTVNGKF--------PGPTLHAREDDNVIVRVTNHV-KYNVTIHWHGVRQLRTGWYDGPAY----ITQCPIQPGQS 107 (553)
Q Consensus 41 ~~~~~~~NG~~--------pGP~i~v~~Gd~v~v~l~N~l-~~~~~iH~HG~~~~~~~~~DGv~~----~tq~~i~pG~~ 107 (553)
....+++||+- +-|.|+|++|+++|+||.|.. .....+|++|....-.. .||.+. +....|.||||
T Consensus 165 ~~d~~liNG~~~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~via-~DG~~~~P~~~~~l~i~pGqR 243 (499)
T 3pxl_A 165 GADATLINGKGRAPSDSVAELSVIKVTKGKRYRFRLVSLSCNPNHTFSIDGHNLTIIE-VDSVNSQPLEVDSIQIFAAQR 243 (499)
T ss_dssp SCSEEEETTBCCCTTCTTCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEEEE-ETTEEEEEEEESBEEECTTCE
T ss_pred CCcEEEECCCCcCCCCCCCCcceEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEEEE-ECCcccCceEeeeEEECCCcE
Confidence 35789999973 237999999999999999997 45678888887643321 688542 22356899999
Q ss_pred eEEEEEeCCCCcceEEecChhh--hh--ccceeeEEEcCCCCCCCCCCCCCcceEEEEeeeeccCHHHH-HHHHHhCCCC
Q 008799 108 YVYNFTLTGQRGTLLWHAHISW--LR--ATVHGAIVILPKRSVPYPFPKADKEKIIVFGEWWKADVEAV-INQATQMGVA 182 (553)
Q Consensus 108 ~~y~~~~~~~~Gt~wYH~H~~~--~~--~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~-~~~~~~~g~~ 182 (553)
++..+++++.+|.||..+.... .. .+..-+++.........|......... .+.+......... .......+..
T Consensus 244 ~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~ail~Y~~~~~~~p~~~~~~~~~-~~~~~~L~p~~~~~~p~~~~~~~~ 322 (499)
T 3pxl_A 244 YSFVLDANQAVDNYWIRANPNFGNVGFDGGINSAILRYDGAPAVEPTTNQTTSVK-PLNEVDLHPLVSTPVPGAPSSGGV 322 (499)
T ss_dssp EEEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTSCSSCCCCCCCCCSS-BCCGGGCCBSSCCCCSSCSSTTCS
T ss_pred EEEEEECCCCCceEEEEEecccCccccCCCceEEEEEeCCCCCCCCCCCCCCCCc-ccccccccccccccCCCcccCCCC
Confidence 9999998666799999875321 11 222223333322211111000000000 0000000000000 0000000000
Q ss_pred --------CCCCceEEECCcCCCCCC----------------CCCCCeEEEEEcCCEEEEEEE---ecCCCceEEEEEcC
Q 008799 183 --------PNVSDAHTINGHPGPVTN----------------CTSQGFTLHVESGKTYLLRIV---NAAVNDELFFKIAG 235 (553)
Q Consensus 183 --------~~~~~~~~iNG~~~~~~~----------------~~~~~~~~~v~~G~~~rlRli---N~~~~~~~~~~i~g 235 (553)
......|+|||+.+.... .......+.++.|++++|.|. |.+.. .+-|||||
T Consensus 323 d~~~~l~~~~~~~~w~iNg~s~~~~~~P~L~~~~~g~~~~~~~~~~~~v~~~~~g~~V~ivl~~~~n~~~~-~HP~HLHG 401 (499)
T 3pxl_A 323 DKAINMAFNFNGSNFFINGASFVPPTVPVLLQILSGAQTAQDLLPSGSVYVLPSNASIEISFPATAAAPGA-PHPFHLHG 401 (499)
T ss_dssp SEEEECCEEECSSCEEETTBCCCCCSSCHHHHHHTTCCSTTTSSSTTSEEEECTTCEEEEEEECCTTSCSC-SCEEEETT
T ss_pred cEEEEEEEEecCcEEEEcCEecCCCCCchhhhhhcCCccccccCCCceeEEecCCCEEEEEEecCcccCCC-CccceecC
Confidence 001136889998763210 001126789999999999999 44443 44599999
Q ss_pred ceEEEEeeCCCcc----cceEeeEEEeCC---CccEEEEEEeCCCCCeeEEEEee
Q 008799 236 HNLTVVEVDSSYT----KPFKTDTIFIGP---GQTTNALLTADKKIGKYLITISP 283 (553)
Q Consensus 236 h~~~via~DG~~~----~p~~~d~~~l~p---geR~dv~v~~~~~~g~~~i~~~~ 283 (553)
|.|+|++.+|... .|...|++.|.+ |+.+.|.+++++ ||.|.+|||.
T Consensus 402 h~F~Vl~~~g~~~~n~~~P~~rDtv~v~~~~pg~~~~irf~adn-PG~W~~HCHi 455 (499)
T 3pxl_A 402 HTFAVVRSAGSTVYNYDNPIFRDVVSTGTPAAGDNVTIRFDTNN-PGPWFLHCHI 455 (499)
T ss_dssp CCEEEEECTTCCCCCSSSCCEESEEECCCGGGTCEEEEEEECCS-CEEEEEEESS
T ss_pred CcEEEEeccCCcccccCCCCccceEEcCCcCCCcEEEEEEEcCC-CceEEEEeCC
Confidence 9999999888643 588999999986 999999999997 7999999994
No 59
>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ...
Probab=99.54 E-value=2e-13 Score=144.00 Aligned_cols=250 Identities=12% Similarity=0.117 Sum_probs=155.1
Q ss_pred EEEEEEEEEEEeeccc--------------ceeeEEEECCCCCCCeEeecCCCEEEEEEEeCC-CCCceeee-CCCcccC
Q 008799 24 RHYNFTVVMTNMTKLC--------------ASKSIVTVNGKFPGPTLHAREDDNVIVRVTNHV-KYNVTIHW-HGVRQLR 87 (553)
Q Consensus 24 ~~~~l~~~~~~~~~~g--------------~~~~~~~~NG~~pGP~i~v~~Gd~v~v~l~N~l-~~~~~iH~-HG~~~~~ 87 (553)
.++.|.+++-....+| .....+++||+.. |.+.+ +|+++|+||.|.. .....+++ +|....-
T Consensus 151 ~d~~lvl~D~~~~~~g~~~~~~~~~~~~~g~~gd~~lvNG~~~-p~~~v-~g~~~RlRliNas~~~~~~l~i~dg~~~~v 228 (488)
T 3od3_A 151 DDVPVIVQDKKFSADGQIDYQLDVMTAAVGWFGDTLLTNGAIY-PQHAA-PRGWLRLRLLNGCNARSLNFATSDNRPLYV 228 (488)
T ss_dssp TEEEEEEEEECBCTTSSBCCCCSHHHHHHCCCCSEEEETTBSS-CEEEE-EEEEEEEEEEECCSSCCEEEEETTCCCEEE
T ss_pred cceeEEEEEeeecCCCceeccccccccccCCCCCEEEEcCCcC-ccEec-CCCEEEEEEEccCCCceeeeeecCCCeEEE
Confidence 3666777665543332 3347899999964 88876 6789999999997 45677877 5654221
Q ss_pred CCCCCCCCC-----ccCCCCCCCCceEEEEEeCCCCcceEEecChhhhhccc-----e---eeEEEcC-----CCCCC--
Q 008799 88 TGWYDGPAY-----ITQCPIQPGQSYVYNFTLTGQRGTLLWHAHISWLRATV-----H---GAIVILP-----KRSVP-- 147 (553)
Q Consensus 88 ~~~~DGv~~-----~tq~~i~pG~~~~y~~~~~~~~Gt~wYH~H~~~~~~Gl-----~---G~liV~~-----~~~~~-- 147 (553)
.. .||.+. +....|.||||++..+++ .+.++|+.-+..... .|+ . -.+-|.+ ....+
T Consensus 229 Ia-~DG~~l~~P~~~~~l~l~pGeR~dvlv~~-~~~~~~~l~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~P~~ 305 (488)
T 3od3_A 229 IA-SDGGLLPEPVKVSELPVLMGERFEVLVEV-NDNKPFDLVTLPVSQ-MGMAIAPFDKPHPVMRIQPIAISASGALPDT 305 (488)
T ss_dssp EE-ETTEEEEEEEEESCEEECTTCEEEEEEEE-CTTCCEEEEECCCSS-TTTTSTTTTSCEEEEEEEEEEEECCCCCCSC
T ss_pred EE-eCCCcccCccEeceEEECCCCEEEEEEEe-CCCceEEEEEeccCC-CCcccccccCccceeEecccccCCCCCCCcc
Confidence 11 688432 334668999999999998 567788776542111 111 0 0111221 11110
Q ss_pred -CC---CCC----CCcceEEEEeeeeccCH-HHHHHHHH---hCCC----------CCCC-----------CceEEECCc
Q 008799 148 -YP---FPK----ADKEKIIVFGEWWKADV-EAVINQAT---QMGV----------APNV-----------SDAHTINGH 194 (553)
Q Consensus 148 -~~---~~~----~~~e~~l~~~d~~~~~~-~~~~~~~~---~~g~----------~~~~-----------~~~~~iNG~ 194 (553)
.+ .+. ..+++.+.+.......+ ...+..+. ..+. .+.+ ...|+|||+
T Consensus 306 L~~~~~~~~~~~~~~r~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~ING~ 385 (488)
T 3od3_A 306 LSSLPALPSLEGLTVRKLQLSMDPMLDMMGMQMLMEKYGDQAMAGMDHSQMMGHMGHGNMNHMNHGGKFDFHHANKINGQ 385 (488)
T ss_dssp CCCCCCCCCCTTCCEEEEEEEECHHHHHHHHHHHHHHHGGGGGTTSCHHHHCCCSCCCCCCCSCCCGGGCGGGCEEETTB
T ss_pred cccCCCCcccccccceEEEEEecccccccccccccccccccccccccccccccccccCccccccccccccccceeeECCe
Confidence 00 111 12334444321000000 00111000 0000 0000 124899999
Q ss_pred CCCCCCCCCCCeEEEEEcCCEEEEEEEecCCCceEEEEEcCceEEEEeeCCCccc---ceEeeEEEeCCCccEEEEEEeC
Q 008799 195 PGPVTNCTSQGFTLHVESGKTYLLRIVNAAVNDELFFKIAGHNLTVVEVDSSYTK---PFKTDTIFIGPGQTTNALLTAD 271 (553)
Q Consensus 195 ~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~~---p~~~d~~~l~pgeR~dv~v~~~ 271 (553)
.++. ..+.++++.|+++||+|+|.+....+.||||||+|+|++.||.... +.++|++.|. |+++.|+++++
T Consensus 386 ~~~~-----~~~~~~~~~G~~e~w~l~N~~~~~~Hp~HlHg~~F~Vl~~~g~~~~~~~~~~kDTV~v~-g~~~~i~~~f~ 459 (488)
T 3od3_A 386 AFDM-----NKPMFAAAKGQYERWVISGVGDMMLHPFHIHGTQFRILSENGKPPAAHRAGWKDTVKVE-GNVSEVLVKFN 459 (488)
T ss_dssp CCCT-----TCCSEECCBSSCEEEEEECTTCCCCEEEEETTCCBEEEEBTTBCCCGGGSSSBSEEEES-SSEEEEEECBC
T ss_pred eCCC-----CCCceEcCCCCEEEEEEEeCCCCCCccEEEcCceEEEeccCCCccccccCCceeEEEeC-CCEEEEEEEec
Confidence 8632 1266899999999999999986566779999999999999998764 3579999999 99999999997
Q ss_pred CC---CCeeEEEEeec
Q 008799 272 KK---IGKYLITISPF 284 (553)
Q Consensus 272 ~~---~g~~~i~~~~~ 284 (553)
+. +|.|++|||..
T Consensus 460 ~~~~~~G~~m~HCH~l 475 (488)
T 3od3_A 460 HDAPKEHAYMAHCHLL 475 (488)
T ss_dssp SCCCGGGCEEEEESSH
T ss_pred cCCCCCCCEEEeCCch
Confidence 52 57999999964
No 60
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A*
Probab=99.53 E-value=3.2e-13 Score=146.01 Aligned_cols=210 Identities=16% Similarity=0.147 Sum_probs=136.5
Q ss_pred eEeecCCCEEEEEEEeCCC-CCceeeeCCCcccCCCCCCCCCC----ccCCCCCCCCceEEEEEe-CCCCcceEEecChh
Q 008799 55 TLHAREDDNVIVRVTNHVK-YNVTIHWHGVRQLRTGWYDGPAY----ITQCPIQPGQSYVYNFTL-TGQRGTLLWHAHIS 128 (553)
Q Consensus 55 ~i~v~~Gd~v~v~l~N~l~-~~~~iH~HG~~~~~~~~~DGv~~----~tq~~i~pG~~~~y~~~~-~~~~Gt~wYH~H~~ 128 (553)
+|+|++|+++|+||.|... ....+|++|....-.. .||.+. +....|.||||++..+++ ++.+|.||.+++..
T Consensus 205 ~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~vi~-~DG~~~~P~~~~~l~i~pgqR~dvlv~~~~~~~g~y~i~~~~~ 283 (552)
T 1aoz_A 205 IFHVSPKKTYRIRIASTTALAALNFAIGNHQLLVVE-ADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTR 283 (552)
T ss_dssp CEEECTTCEEEEEEEECCSSCEEEEEETTCCEEEEE-ETTEEEEEEEESCEEECTTCEEEEEEECCSCTTCCEEEEEEEE
T ss_pred EEEEcCCCEEEEEEEcccccceEEEEEcCcEEEEEE-ECCcccCceEEeEEEEcCCcEEEEEEEcCCCCCCCEEEEEEcc
Confidence 8999999999999999974 4567888887543321 688542 234568999999999998 45589999998864
Q ss_pred hhh-ccc--eeeEEEcCCCCCCCC------CC--------------------------CCCcceEEEEeeeeccCHHHHH
Q 008799 129 WLR-ATV--HGAIVILPKRSVPYP------FP--------------------------KADKEKIIVFGEWWKADVEAVI 173 (553)
Q Consensus 129 ~~~-~Gl--~G~liV~~~~~~~~~------~~--------------------------~~~~e~~l~~~d~~~~~~~~~~ 173 (553)
... ... .+.|-.........+ .+ ..++.+.+.+..-
T Consensus 284 ~~~~~~~~~~ail~y~~~~~~~~p~~~~p~~p~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~l~~~~~--------- 354 (552)
T 1aoz_A 284 ARHPNTPPGLTLLNYLPNSVSKLPTSPPPQTPAWDDFDRSKNFTYRITAAMGSPKPPVKFNRRIFLLNTQN--------- 354 (552)
T ss_dssp SSCCCSCCEEEEEEETTSCTTSCCSSCCCCCCCTTCHHHHHHHHTTCCBCTTCCCCCSSCSEEEEEEEEEE---------
T ss_pred cCCCCCccEEEEEEECCCCCCCCCCCCCCCCCccccccccccccccccccCCCCCCCCCCcEEEEEEEeec---------
Confidence 311 111 222222222210000 00 0011111111000
Q ss_pred HHHHhCCCCCCCCceEEECCcCCCC-----------------------------CC------CCCC---CeEEEEEcCCE
Q 008799 174 NQATQMGVAPNVSDAHTINGHPGPV-----------------------------TN------CTSQ---GFTLHVESGKT 215 (553)
Q Consensus 174 ~~~~~~g~~~~~~~~~~iNG~~~~~-----------------------------~~------~~~~---~~~~~v~~G~~ 215 (553)
.......|+|||+.+.. ++ |... ...+.++.|++
T Consensus 355 --------~~~~~~~w~iNg~s~~~p~~P~L~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~g~~ 426 (552)
T 1aoz_A 355 --------VINGYVKWAINDVSLALPPTPYLGAMKYNLLHAFDQNPPPEVFPEDYDIDTPPTNEKTRIGNGVYQFKIGEV 426 (552)
T ss_dssp --------EETTEEEEEETTEEECCCSSCHHHHHHTTCTTSSCCSCCCSCCCTTCCTTSCCCCTTCEEECCCEEECTTCE
T ss_pred --------cCCCeEEEEECCCccCCCCCCHHHHHhhcCccccccCCCccccccccccccccccccccccceEEEecCCCE
Confidence 00001247788875411 00 0000 14589999999
Q ss_pred EEEEEEecCCC-----ceEEEEEcCceEEEEeeC-CCc----------ccceEeeEEEeCCCccEEEEEEeCCCCCeeEE
Q 008799 216 YLLRIVNAAVN-----DELFFKIAGHNLTVVEVD-SSY----------TKPFKTDTIFIGPGQTTNALLTADKKIGKYLI 279 (553)
Q Consensus 216 ~rlRliN~~~~-----~~~~~~i~gh~~~via~D-G~~----------~~p~~~d~~~l~pgeR~dv~v~~~~~~g~~~i 279 (553)
++|.|.|.+.. ..|-||||||.|+|++.. |.+ ..|...|++.|.+|+.+.|.+++++ ||.|.+
T Consensus 427 v~ivi~N~~~~~~~~~~~HP~HLHGh~F~Vl~~g~G~~~~~~~~~~n~~~p~~RDTv~vpp~g~v~Irf~aDN-PG~W~~ 505 (552)
T 1aoz_A 427 VDVILQNANMMKENLSETHPWHLHGHDFWVLGYGDGKFSAEEESSLNLKNPPLRNTVVIFPYGWTAIRFVADN-PGVWAF 505 (552)
T ss_dssp EEEEEEECCCSSTTCCCCEEEEETTCCEEEEEEEESSCCGGGGGGSCCSSCCEESEEEECTTEEEEEEEECCS-CEEEEE
T ss_pred EEEEEeCCcccccccCCCCCEEEcCCceEEEecccCccCcccccccccCCCCccCeEEeCCCceEEEEEEcCC-CeEEEE
Confidence 99999998753 346699999999999984 553 2578899999999999999999997 799999
Q ss_pred EEee
Q 008799 280 TISP 283 (553)
Q Consensus 280 ~~~~ 283 (553)
|||-
T Consensus 506 HCHi 509 (552)
T 1aoz_A 506 HCHI 509 (552)
T ss_dssp EESS
T ss_pred Eeee
Confidence 9995
No 61
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A
Probab=99.52 E-value=3.9e-15 Score=124.42 Aligned_cols=90 Identities=19% Similarity=0.152 Sum_probs=70.0
Q ss_pred CCCCCCeEeecCCCEEEEEEEeCCCCCceeeeCCCcccCC--CCCCCCCCccCCCCCCCCceEEEEEeCCCCcceEEecC
Q 008799 49 GKFPGPTLHAREDDNVIVRVTNHVKYNVTIHWHGVRQLRT--GWYDGPAYITQCPIQPGQSYVYNFTLTGQRGTLLWHAH 126 (553)
Q Consensus 49 G~~pGP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~--~~~DGv~~~tq~~i~pG~~~~y~~~~~~~~Gt~wYH~H 126 (553)
-+|++|+|++++||+|+ ++|.+..++++||||...+.. ..+||.+ .++..|.||++++|+|.+++++|+||||||
T Consensus 14 ~~f~p~~i~v~~Gd~V~--~~N~~~~~H~v~~~~~~~~~~~g~~~~~~~-~~~~~i~pG~~~~~~f~~~~~~G~y~y~C~ 90 (105)
T 3cvb_A 14 FQFEPANVTVHPGDTVK--WVNNKLPPHNILFDDKQVPGASKELADKLS-HSQLMFSPGESYEITFSSDFPAGTYTYYCA 90 (105)
T ss_dssp SCEESSEEEECTTEEEE--EEECSSCCEEEEECTTSSGGGCHHHHHHHC-EEEEECSTTCEEEEEECTTSCSEEEEEECT
T ss_pred cEEeCCEEEEcCCCEEE--EEECCCCCCeEEEeCCCCCccccccccccc-ccccccCCCCeEEEEEecCCCCeeEEEEeC
Confidence 35678999999999975 679988999999999875431 0123332 245689999999999986468999999999
Q ss_pred hhhhhccceeeEEEcC
Q 008799 127 ISWLRATVHGAIVILP 142 (553)
Q Consensus 127 ~~~~~~Gl~G~liV~~ 142 (553)
.| ..+||.|.|+|++
T Consensus 91 ~H-~~~GM~G~i~V~~ 105 (105)
T 3cvb_A 91 PH-RGAGMVGKITVEG 105 (105)
T ss_dssp TT-GGGTCEEEEEECC
T ss_pred Cc-hhcCCEEEEEEcC
Confidence 43 2479999999974
No 62
>2g23_A PHS, phenoxazinone synthase; copper, metalloprotein, laccase, multicopper oxidase, hexamer; 2.30A {Streptomyces antibioticus} PDB: 3gyr_A
Probab=99.51 E-value=8e-13 Score=143.00 Aligned_cols=230 Identities=14% Similarity=0.112 Sum_probs=144.2
Q ss_pred eeeEEEECCCCCCCeEeecCCCEEEEEEEeCC-CCCceeeeCCC---------cccCCCCCCCCCC-----cc------C
Q 008799 41 SKSIVTVNGKFPGPTLHAREDDNVIVRVTNHV-KYNVTIHWHGV---------RQLRTGWYDGPAY-----IT------Q 99 (553)
Q Consensus 41 ~~~~~~~NG~~pGP~i~v~~Gd~v~v~l~N~l-~~~~~iH~HG~---------~~~~~~~~DGv~~-----~t------q 99 (553)
....+++||+. .|.+.|++| ++|+||.|.. .....+++.|. .+.. .||.+. +. .
T Consensus 253 ~gd~~lVNG~~-~p~~~V~~g-~yRlRliNas~~r~~~l~i~~h~g~~~~~~~~vIa---~DG~~l~~P~~~~~~~~~~~ 327 (612)
T 2g23_A 253 FGPYTTVNGRI-WPYADVDDG-WYRLRLVNASNARIYNLVLIDEDDRPVPGVVHQIG---SDGGLLPRPVPVDFDDTLPV 327 (612)
T ss_dssp CCSEEEETTEE-SCEEEEESS-EEEEEEEECCSSCCEEEEEECTTSCBCTTSEEEEE---ETTEEEEEEEEECSSSSSSS
T ss_pred cCCEEEECCcc-CCeEEecCC-eEEEEEEecCCCeEEEEEEcCCCCccCCCcEEEEE---eCCeEccCCEEecccCcccE
Confidence 35788999996 599999999 9999999998 46677887664 2222 688543 22 4
Q ss_pred CCCCCCCceEEEEEeCCCCcc-eEEecChhhhhc-----------cceeeEEEcCCC-CCCCCCCCC-------------
Q 008799 100 CPIQPGQSYVYNFTLTGQRGT-LLWHAHISWLRA-----------TVHGAIVILPKR-SVPYPFPKA------------- 153 (553)
Q Consensus 100 ~~i~pG~~~~y~~~~~~~~Gt-~wYH~H~~~~~~-----------Gl~G~liV~~~~-~~~~~~~~~------------- 153 (553)
..|.||||++..+++.+.+|+ ++...-...... +..=-|.|.... ......+..
T Consensus 328 l~l~pgeR~dvlVd~~~~~g~~~~L~~~~~~~~~g~~~~~~~~~~~~vm~f~V~~~~~~~~~~~P~~L~~~~~~l~~~~~ 407 (612)
T 2g23_A 328 LSAAPAERFDLLVDFRALGGRRLRLVDKGPGAPAGTPDPLGGVRYPEVMEFRVRETCEEDSFALPEVLSGSFRRMSHDIP 407 (612)
T ss_dssp EEECTTCEEEEEEECTTCTTCEEEEEECCTTSCTTSCBGGGTBSCCEEEEEEEECCSCCCCCCCCSSCCSSCCCCCTTSC
T ss_pred EEECCcCeEEEEEECCCCCCCEEEEEeCCccCCCCccccccCccccceEEEEEccCCCCCCCCCChhhccccccCCcccc
Confidence 568999999999998655674 666654321111 111124444332 111111110
Q ss_pred CcceEEEEe------------eeeccC---HHHHHHHHHhCC-----CCCCCCceEEECCcCCCCCCCCCCCeEEEEEcC
Q 008799 154 DKEKIIVFG------------EWWKAD---VEAVINQATQMG-----VAPNVSDAHTINGHPGPVTNCTSQGFTLHVESG 213 (553)
Q Consensus 154 ~~e~~l~~~------------d~~~~~---~~~~~~~~~~~g-----~~~~~~~~~~iNG~~~~~~~~~~~~~~~~v~~G 213 (553)
.....+++. -|.... ...+ .....+ ........++|||+.+.. .+.++++.|
T Consensus 408 ~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~~~~~~iNG~~~~~------~~~~~v~~G 479 (612)
T 2g23_A 408 HGHRLIVLTPPGTKGSGGHPEIWEMAEVEDPADV--QVPAEGVIQVTGADGRTKTYRRTAATFND------GLGFTIGEG 479 (612)
T ss_dssp CEEEEEEECCTTCTTSTTCCCEEEEEEEC-------CCSCTTEEEEECTTSCEEEEEEEECSTTS------CCCEEEETT
T ss_pred cceeEEeeccccccccccccceeecccccccccc--ccccccceeeeccCCceeEEEECCccCCC------CCceEecCC
Confidence 001112221 010000 0000 000000 000011468999997631 277999999
Q ss_pred CEEEEEEEecCCCceEEEEEcCceEEEEeeCCC------------------------cc---cceEeeEEEeCCCccEEE
Q 008799 214 KTYLLRIVNAAVNDELFFKIAGHNLTVVEVDSS------------------------YT---KPFKTDTIFIGPGQTTNA 266 (553)
Q Consensus 214 ~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~------------------------~~---~p~~~d~~~l~pgeR~dv 266 (553)
++++|+|+|.+.. .+.||||||.|+|++.+|. .. ++.++|++.|.||+++.|
T Consensus 480 ~~v~w~l~N~~~~-~HPiHlHg~~F~Vl~r~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~e~~~kDTv~v~Pg~~~~i 558 (612)
T 2g23_A 480 THEQWTFLNLSPI-LHPMHIHLADFQVLGRDAYDASGFDLALGGTRTPVRLDPDTPVPLAPNELGHKDVFQVPGPQGLRV 558 (612)
T ss_dssp CEEEEEEEECSSS-CEEEEESSCCEEEEEEEEEECTTEETTTTEESSCEEEEEEEECCCCTTSSSCBSEEEECSSEEEEE
T ss_pred CEEEEEEEeCCCC-CCCeEEcCceEEEecccCcccccccccccCcccccccccccccCCCcccccccCeEEECCCcEEEE
Confidence 9999999999855 5559999999999987531 11 234799999999999999
Q ss_pred EEEeCCCCCeeEEEEeec
Q 008799 267 LLTADKKIGKYLITISPF 284 (553)
Q Consensus 267 ~v~~~~~~g~~~i~~~~~ 284 (553)
.++++..||.|.+|||..
T Consensus 559 ~~~~~~~pG~w~~HCHil 576 (612)
T 2g23_A 559 MGKFDGAYGRFMYHCHLL 576 (612)
T ss_dssp EEECCSCCEEEEEEESSH
T ss_pred EEEeCCCCccEEEEeCch
Confidence 999994589999999953
No 63
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A*
Probab=99.51 E-value=1.3e-12 Score=141.15 Aligned_cols=240 Identities=10% Similarity=0.046 Sum_probs=145.1
Q ss_pred eeEEEECCCCC--------CCeEeecCCCEEEEEEEeCCC-CCceeeeCCCcccCCCCCCCCCC----ccCCCCCCCCce
Q 008799 42 KSIVTVNGKFP--------GPTLHAREDDNVIVRVTNHVK-YNVTIHWHGVRQLRTGWYDGPAY----ITQCPIQPGQSY 108 (553)
Q Consensus 42 ~~~~~~NG~~p--------GP~i~v~~Gd~v~v~l~N~l~-~~~~iH~HG~~~~~~~~~DGv~~----~tq~~i~pG~~~ 108 (553)
...+++||+.. -|+|+|++|+++|+||.|... ....+|++|....-.. .||.+. +....|.||||+
T Consensus 195 ~d~~liNG~~~~~~~~~g~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~vi~-~DG~~~~p~~~~~l~l~pgeR~ 273 (559)
T 2q9o_A 195 SDNVLINGTAVNPNTGEGQYANVTLTPGKRHRLRILNTSTENHFQVSLVNHTMTVIA-ADMVPVNAMTVDSLFLAVGQRY 273 (559)
T ss_dssp BSEEEETTBCBCTTTCCBCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEEEE-ETTEEEEEEEESCEEECTTCEE
T ss_pred cceeEECCccccCcCCCCCceEEEEcCCCEEEEEEEecCCCceEEEEECCCceEEEe-cCCcccCceEeCeEEEccEEEE
Confidence 46789999973 379999999999999999984 4678999887643321 688652 234568999999
Q ss_pred EEEEEeCCCCcceEEecCh--hhh---h-ccc-eeeEEEcCCCCCCCCCCC----CC----cceEE-EEeeeeccCHH--
Q 008799 109 VYNFTLTGQRGTLLWHAHI--SWL---R-ATV-HGAIVILPKRSVPYPFPK----AD----KEKII-VFGEWWKADVE-- 170 (553)
Q Consensus 109 ~y~~~~~~~~Gt~wYH~H~--~~~---~-~Gl-~G~liV~~~~~~~~~~~~----~~----~e~~l-~~~d~~~~~~~-- 170 (553)
+..+++++.+|.||..... ... . ... .+.+-...... ..|... .+ .+..+ -+.........
T Consensus 274 dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~~~ail~y~~~~~-~~P~~~~~~~~~~~~~~~~~l~p~~~~~~p~~~~~ 352 (559)
T 2q9o_A 274 DVVIDASRAPDNYWFNVTFGGQAACGGSLNPHPAAIFHYAGAPG-GLPTDEGTPPVDHQCLDTLDVRPVVPRSVPVNSFV 352 (559)
T ss_dssp EEEEECCSCSSEEEEEEECCGGGTTCCBSSSCCEEEEEETTSCC-SCCCCCCCCCCCCTTCCCSCCCBSSCCBCCCTTCC
T ss_pred EEEEECCCCCCcEEEEEEeccccccCCCCCCceeEEEEECCCCC-CCCCCCCCcCCCcccccccccccCCCCCCCCcccc
Confidence 9999986568999998865 211 1 111 22222222111 101000 00 00000 00000000000
Q ss_pred H--HHHHHHhCCCCCCCCceEEECCcCCCCCCCCC--------------CCeEEEEEcCCEEEEEEEecCC----CceEE
Q 008799 171 A--VINQATQMGVAPNVSDAHTINGHPGPVTNCTS--------------QGFTLHVESGKTYLLRIVNAAV----NDELF 230 (553)
Q Consensus 171 ~--~~~~~~~~g~~~~~~~~~~iNG~~~~~~~~~~--------------~~~~~~v~~G~~~rlRliN~~~----~~~~~ 230 (553)
. ...-.............|+|||+.+....-.. ....+.++.++.+++.++|... ...|-
T Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~iNg~s~~~~~~~P~L~~~~~g~~~~~~~~~~~~~~~~~~v~~~vi~n~~~~~~~~~HP 432 (559)
T 2q9o_A 353 KRPDNTLPVALDLTGTPLFVWKVNGSDINVDWGKPIIDYILTGNTSYPVSDNIVQVDAVDQWTYWLIENDPEGPFSLPHP 432 (559)
T ss_dssp CCGGGEEEEEEECSSSSSCEEEETTBCCCCCTTSCHHHHHHHTCCCCCGGGCEEEECCSSCEEEEEEEECTTSSCCCCEE
T ss_pred cceeEEEEEEeecCCCceEEEEECCEecccCCCCCcHhHhhcCCccCCCCceEEEcCCCCEEEEEEEeCCCccccCCCCc
Confidence 0 00000000000011247899999763210000 0135788777777776666643 45566
Q ss_pred EEEcCceEEEEeeCC---------Ccc------------cceEeeEEEeCCCccEEEEEEeCCCCCeeEEEEeec
Q 008799 231 FKIAGHNLTVVEVDS---------SYT------------KPFKTDTIFIGPGQTTNALLTADKKIGKYLITISPF 284 (553)
Q Consensus 231 ~~i~gh~~~via~DG---------~~~------------~p~~~d~~~l~pgeR~dv~v~~~~~~g~~~i~~~~~ 284 (553)
||||||.|+|++.++ +.. .|.+.|++.|.+++++.|.+++++ ||.|.+|||..
T Consensus 433 ~HLHGh~F~Vl~~g~~~~~~~~~~g~~~~~~~~~~~n~~~p~~RDTV~Vp~~g~v~IrF~adN-PG~W~~HCHil 506 (559)
T 2q9o_A 433 MHLHGHDFLVLGRSPDVPAASQQRFVFDPAVDLARLNGDNPPRRDTTMLPAGGWLLLAFRTDN-PGAWLFHCHIA 506 (559)
T ss_dssp EEESSSCEEEEEESCCCCTTSCCCCCCCHHHHGGGCCCBSCCEESEEEECTTSEEEEEEECCS-CEEEEEEECCH
T ss_pred EEECCCceEEEecccccccccccccccCccccccccccCCCCccceEEccCCccEEEEEEcCC-CeeEEEEecch
Confidence 999999999999987 321 467899999999999999999997 79999999953
No 64
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A*
Probab=99.49 E-value=8.3e-14 Score=137.15 Aligned_cols=100 Identities=22% Similarity=0.356 Sum_probs=82.9
Q ss_pred EEECCCC--CCCeEeecCCCEEEEEEEeCCCCCceeeeCCCcccCCCCCCCCC--------CccCCCCCCCCceEEEEEe
Q 008799 45 VTVNGKF--PGPTLHAREDDNVIVRVTNHVKYNVTIHWHGVRQLRTGWYDGPA--------YITQCPIQPGQSYVYNFTL 114 (553)
Q Consensus 45 ~~~NG~~--pGP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~--------~~tq~~i~pG~~~~y~~~~ 114 (553)
|+|||+. ++|.|++++||+|+++|.|.....+++|+||...... .||.. ....+.|.||++++|.|.+
T Consensus 157 ~~iNG~~~~~~p~i~v~~G~~vri~l~N~~~~~Hp~HlHG~~f~v~--~~G~~~~p~~~~~~~Dtv~v~pg~~~~~~~~~ 234 (276)
T 3kw8_A 157 MTINNRKPHTGPDFEATVGDRVEIVMITHGEYYHTFHMHGHRWADN--RTGILTGPDDPSRVIDNKITGPADSFGFQIIA 234 (276)
T ss_dssp TEETTCCTTCCCCEEEETTCEEEEEEEEESSCCEEEEETTCCEESS--SSSSCCSTTCCCCEESEEEECTTCEEEEEEET
T ss_pred cccceecccCCCCEEEecCCEEEEEEecCCCcceeEEEccceeEEe--ccCccCCCcccccCCccEEeCCCceEEEEEEe
Confidence 6899998 8899999999999999999999999999999764432 34421 1233569999999999998
Q ss_pred CC--CCcceEEecChhhhh-ccceeeEEEcCCCCC
Q 008799 115 TG--QRGTLLWHAHISWLR-ATVHGAIVILPKRSV 146 (553)
Q Consensus 115 ~~--~~Gt~wYH~H~~~~~-~Gl~G~liV~~~~~~ 146 (553)
.+ .+|+||||||...+. .||.|.|+|++++..
T Consensus 235 ~~~~npG~w~~HCH~~~H~~~GM~g~~~V~~~~~~ 269 (276)
T 3kw8_A 235 GEGVGAGAWMYHCHVQSHSDMGMVGLFLVKKPDGT 269 (276)
T ss_dssp TTTTCSEEEEEEECSHHHHHTTCEEEEEEECTTSC
T ss_pred ccCCCCCeEEEECCCchHhhCCCeEEEEEeCCCCC
Confidence 32 699999999987766 899999999988753
No 65
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum}
Probab=99.49 E-value=5.5e-13 Score=140.20 Aligned_cols=212 Identities=17% Similarity=0.121 Sum_probs=140.9
Q ss_pred ceeeEEEECCCCCCCeEeecCCCEEEEEEEeCCC-CCceeee--CC---CcccCCCCCCCCCC-----ccCCCCCCCCce
Q 008799 40 ASKSIVTVNGKFPGPTLHAREDDNVIVRVTNHVK-YNVTIHW--HG---VRQLRTGWYDGPAY-----ITQCPIQPGQSY 108 (553)
Q Consensus 40 ~~~~~~~~NG~~pGP~i~v~~Gd~v~v~l~N~l~-~~~~iH~--HG---~~~~~~~~~DGv~~-----~tq~~i~pG~~~ 108 (553)
.....+++||+. .|+|+|++| ++|+||.|... ....+|+ +| ....-. ..||.+. +....|.||||+
T Consensus 167 ~~~~~~liNG~~-~p~~~v~~g-~~RlRliNa~~~~~~~~~i~~~~~~~~~~~vi-a~DG~~~~~P~~~~~l~l~pgeR~ 243 (448)
T 3aw5_A 167 FLGNAVLVNGVK-DAVFKLSGG-SYRLRLVNGSNARLYMLSIVKKNGDVVPMRLI-AVDQGFLARPIEVRALFLAPAERA 243 (448)
T ss_dssp CCCSEEEETTEE-TCEEEEEEE-EEEEEEEECSSSCCEEEEEEETTSCEECEEEE-EETTEEEEEEEEESCEEECTTCEE
T ss_pred ccccEEEECCcc-cceEEECCC-eEEEEEEcCCCcceEEEEEEcCCCCCccEEEE-EeCCCccCCceEeceEEECCcceE
Confidence 346789999997 499999999 99999999984 5678999 77 332211 1688542 223568999999
Q ss_pred EEEEEeCCCCcceEEecChhhhhcc----c----------eeeE--EEcCCCCC--CCCC---C----CCCcceEEEEee
Q 008799 109 VYNFTLTGQRGTLLWHAHISWLRAT----V----------HGAI--VILPKRSV--PYPF---P----KADKEKIIVFGE 163 (553)
Q Consensus 109 ~y~~~~~~~~Gt~wYH~H~~~~~~G----l----------~G~l--iV~~~~~~--~~~~---~----~~~~e~~l~~~d 163 (553)
+..++++ .+.||..++......| + ...+ .+...... +..+ + ....+..+.+..
T Consensus 244 dvlv~~~--~~~y~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~L~~lp~~~~~~~~~~~~~l~~ 321 (448)
T 3aw5_A 244 EVVVELG--EGVYLLKNTPFDPMHLEMGHGMQEALPEGSEYTIATFLVEGKGEAVPVEALSDPPPEPPKPTRTRRFALSL 321 (448)
T ss_dssp EEEEEEC--SEEEEEEECCCCCCCCTTSSCCCCSSCTTSCEEEEEEEEEEECCCCCCCCCSCCCCCCCCCSEEEEEEEEE
T ss_pred EEEEECC--CCceEEEccccccccCccccccccccCCCCCceEEEEEEcCCCCCCCccccCCCCCCCCCCCceEEEEEeC
Confidence 9999983 4789998764321000 1 1111 12111110 0000 0 011112222210
Q ss_pred eeccCHHHHHHHHHhCCCCCCCCceEEECCcCCCCCCCCCCCeEEE-EEcCCEEEEEEEecCCCceEEEEEcCceEEEEe
Q 008799 164 WWKADVEAVINQATQMGVAPNVSDAHTINGHPGPVTNCTSQGFTLH-VESGKTYLLRIVNAAVNDELFFKIAGHNLTVVE 242 (553)
Q Consensus 164 ~~~~~~~~~~~~~~~~g~~~~~~~~~~iNG~~~~~~~~~~~~~~~~-v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via 242 (553)
+ ...|+|||+.+.. ..+.+. ++.|++++|+|.|.+....+-||||||.|+|++
T Consensus 322 ----------------~-----~~~~~iNg~~~~~-----~~p~~~~~~~g~~v~~~i~N~~~~~~HP~HLHG~~F~Vl~ 375 (448)
T 3aw5_A 322 ----------------S-----GMQWTINGMFWNA-----SNPLFEHVSVEGVELWEIVNDKASMPHPMHLHGFPMWIIE 375 (448)
T ss_dssp ----------------E-----TTEEEETTBCCCT-----TCTTCCCEEECEEEEEEEEECSSSCCEEEEESSSCBEEEE
T ss_pred ----------------C-----CceeeECCCcCCC-----CCCceeccCCCCeEEEEEEcCCCCCCcCEEECCceEEEEE
Confidence 0 0258999998632 114467 999999999999998334455999999999999
Q ss_pred eCCCcc------------cc---eEeeEEEeCCCccEEEEEEeC---C-CCCeeEEEEeec
Q 008799 243 VDSSYT------------KP---FKTDTIFIGPGQTTNALLTAD---K-KIGKYLITISPF 284 (553)
Q Consensus 243 ~DG~~~------------~p---~~~d~~~l~pgeR~dv~v~~~---~-~~g~~~i~~~~~ 284 (553)
.+|... .| .+.|++.|.||+++.|.+++. . .| |.+|||..
T Consensus 376 ~~G~~~~~~~~~~~~~~~~p~~~~~rDTv~v~pg~~~~i~vrF~~~~adnp--w~~HCHil 434 (448)
T 3aw5_A 376 RKDSPRQVAELAVDNRGRLPTDLGLKDTVLIWPGETVKIVVNFDAKKRGQL--FPFHCHNL 434 (448)
T ss_dssp EESCCHHHHTTCCSTTCCCGGGGSCBSEEEECTTCEEEEEEEECGGGTTCE--EEEEESSH
T ss_pred ecCCCcccccccccccCCCccccCCccEEEeCCCCEEEEEEEecccCCCCc--EEEEcCCh
Confidence 999764 23 589999999999999997774 2 24 99999953
No 66
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A*
Probab=99.48 E-value=3e-13 Score=135.53 Aligned_cols=215 Identities=15% Similarity=0.168 Sum_probs=148.5
Q ss_pred eEEEEEcCCEEEEEEEecCCCceEEEEEcCceEEEEeeCCCcccceEeeEEEeCCCccEEEEEEeCC------------C
Q 008799 206 FTLHVESGKTYLLRIVNAAVNDELFFKIAGHNLTVVEVDSSYTKPFKTDTIFIGPGQTTNALLTADK------------K 273 (553)
Q Consensus 206 ~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~~p~~~d~~~l~pgeR~dv~v~~~~------------~ 273 (553)
|+|+++.|++++++|.|... ...++|.||..+.- +.||... ..-.|.||+++...+++.. .
T Consensus 42 P~i~~~~Gd~v~v~~~N~l~-~~~siH~HG~~~~~-~~dG~~~-----~~~~i~PG~~~~Y~~~~~~P~~~~~~~~~~~~ 114 (313)
T 3tas_A 42 PLIELNEGDTLHIEFENTMD-VPVSLHVHGLDYEI-SSDGTKQ-----SRSDVEPGGTRTYTWRTHVPGRRADGTWRAGS 114 (313)
T ss_dssp CCEEEETTCEEEEEEEECSS-SCBCCEESSSBCCG-GGSCSTT-----TTCCBCTTCEEEEEEBCCCCEECTTSCEECCS
T ss_pred CeEEEECCCEEEEEEEECCC-CCccEeecCCcCCc-cCCCCcc-----ccCCcCCCCEEEEEEEeccCCccccccccCCC
Confidence 89999999999999999985 45569999976543 5788753 1124789999988887642 2
Q ss_pred CCeeEEEEeecccccc---ccCCccEEEEEEEcCCCCCCCCccCCCCCCCCcccccccccccccccCCCCCCCCCCCcce
Q 008799 274 IGKYLITISPFMDTIV---AVNNVTGIAFLRYKGTVAFSSTTLTNVPAINATEVTNTFSDNLRSLNSKRYPAKVPLTVDH 350 (553)
Q Consensus 274 ~g~~~i~~~~~~~~~~---~~~~~~~~ail~y~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~~~p~~~p~~~d~ 350 (553)
.|.||.+++....... .... ..+.|....+.. ...|+
T Consensus 115 ~gt~~YH~h~~~~~~~~~~~~~G--l~G~liV~~~~~--------------------------------------~~~d~ 154 (313)
T 3tas_A 115 AGYWHYHDHVVGTEHGTGGIRNG--LYGPVIVRRKGD--------------------------------------VLPDR 154 (313)
T ss_dssp CEEEEEECSSSSSTTCHHHHHHT--CEEEEEEECTTC--------------------------------------BCCSE
T ss_pred ceEEEEeecCcccccchhhhhcc--ccCceEeecccc--------------------------------------ccccc
Confidence 4889999984211100 0111 222222221100 01245
Q ss_pred EEEEEeeeeccCCccCCCCceeeEeeeceeeecCCchhhhhhhccccccccCCCCCCCCeeeccCCCCCCccccCCCeeE
Q 008799 351 SLLLTMAVAVNPCATCPNGTKVGAAMNNISFVMPTTALLQAHYYKISGVFTDDFPAKPPIAFNYTGNYTGTLQTTNGTRL 430 (553)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 430 (553)
++.+.++ .|++|++.+ ...+.
T Consensus 155 e~~l~~~---------------d~t~Ng~~~--------------------------------------------~~~~~ 175 (313)
T 3tas_A 155 THTIVFN---------------DMTINNRPA--------------------------------------------HTGPD 175 (313)
T ss_dssp EEEEEEE---------------TTEETTCCT--------------------------------------------TCCCC
T ss_pred cceeecc---------------chhcccCCc--------------------------------------------ccccc
Confidence 4443321 156665422 01123
Q ss_pred EEecCCCEEEEEEEcCCCCCCCCCCeeecCCceEEEeeCCCCCCCCCCCCCCCCCCCCcceeeEecCCcEEEEEEEe---
Q 008799 431 YRLAYNSTVQLVLQGTTVIAPENHPTHLHGFNFFAVGKGSGNFDPNKDPQKFNLVDPVERNTISVPTAGWTAIRFRA--- 507 (553)
Q Consensus 431 ~~~~~g~~v~~~i~n~~~~~~~~HP~HlHG~~f~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~a--- 507 (553)
+.++.|++|+|+|.|.+ .+.||||||||.|+|+..+... .....+.++||+.|.|++...+++.+
T Consensus 176 l~v~~Ge~vr~~liN~g---~~~hpfHlHGh~F~v~~~~~~~---------~~~~~~~~~Dtv~l~Pger~~v~v~a~~~ 243 (313)
T 3tas_A 176 FEATVGDRVEFVMITHG---EYYHTFHLHGHRWADNRTGMLT---------GPDDPSQVIDNKICGPADSFGFQVIAGEG 243 (313)
T ss_dssp EEEETTCEEEEEEEEES---SCCEEEEETTCCEESSTTSSCC---------STTCCCCEESEEEECTTCEEEEEEETTTT
T ss_pred cccccCCEEEEEEeccc---ccceeeeecCCeeEEEEECCcc---------CCCCCCeeeeEEEeCCCcceEEEEEeccC
Confidence 67889999999999965 5689999999999998875321 12234779999999999887776654
Q ss_pred cCceeeEEeecchhhHhccceEEEEEeCCCC
Q 008799 508 DNPGVWFLHCHLEVHTSWGLKMAFVVDNGKG 538 (553)
Q Consensus 508 dnpG~w~~HCHil~H~d~GM~~~~~V~~~~~ 538 (553)
+|||.|+|||||++|++.|||..|.|++.+.
T Consensus 244 ~nPG~w~~HCHi~~H~~~GM~~~f~V~~~d~ 274 (313)
T 3tas_A 244 VGAGAWMYHCHVQSHSDMGMVGLFLVKKPDG 274 (313)
T ss_dssp TCSEEEEEEECSHHHHHTTCEEEEEEECTTC
T ss_pred CCCEeEEEEeCChHHHHCCCeEEEEEECCCC
Confidence 6899999999999999999999999987654
No 67
>2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A
Probab=99.42 E-value=2.1e-12 Score=138.27 Aligned_cols=218 Identities=14% Similarity=0.110 Sum_probs=138.2
Q ss_pred eeeEEEECCCCCCCeEeecCCCEEEEEEEeCCC-CCceeeeCCC-cccCCCCCCCCCC-----ccCCCCCCCCceEEEEE
Q 008799 41 SKSIVTVNGKFPGPTLHAREDDNVIVRVTNHVK-YNVTIHWHGV-RQLRTGWYDGPAY-----ITQCPIQPGQSYVYNFT 113 (553)
Q Consensus 41 ~~~~~~~NG~~pGP~i~v~~Gd~v~v~l~N~l~-~~~~iH~HG~-~~~~~~~~DGv~~-----~tq~~i~pG~~~~y~~~ 113 (553)
....+++||+. .|.|.|+.| ++|+||.|... ....+|++|. ...-. ..||.+. +....|.||||++..++
T Consensus 229 ~~d~~liNG~~-~p~~~v~~~-~~RlRliNa~~~~~~~~~i~~~~~~~vi-a~DG~~~~~P~~~~~l~l~pgeR~dvlv~ 305 (513)
T 2wsd_A 229 CGETILVNGKV-WPYLEVEPR-KYRFRVINASNTRTYNLSLDNGGDFIQI-GSDGGLLPRSVKLNSFSLAPAERYDIIID 305 (513)
T ss_dssp CCSEEEETTEE-SCEEECCSS-EEEEEEEECCSSCCEEEEETTCCCEEEE-EETTEEEEEEEEESEEEECTTCEEEEEEE
T ss_pred ccceEEECCcc-cceEEecCC-EEEEEEEccCCcceEEEEECCCCeEEEE-ccCCCcccCceEeCeEEECCeeeEEEEEE
Confidence 35789999997 599999885 99999999985 4578888776 32211 1688432 23456899999999999
Q ss_pred eCCCCcceEE-ecChh--hhh-ccceeeE-EEcCCC--C----CCCC--CCC--------CCcceEEEEeeeeccCHHHH
Q 008799 114 LTGQRGTLLW-HAHIS--WLR-ATVHGAI-VILPKR--S----VPYP--FPK--------ADKEKIIVFGEWWKADVEAV 172 (553)
Q Consensus 114 ~~~~~Gt~wY-H~H~~--~~~-~Gl~G~l-iV~~~~--~----~~~~--~~~--------~~~e~~l~~~d~~~~~~~~~ 172 (553)
+++.+|.++. ..-.. ... .+....+ -..... . ...| +.. ...+..+.+....
T Consensus 306 ~~~~~g~~~~l~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~~~~~~~~l~~~~------- 378 (513)
T 2wsd_A 306 FTAYEGESIILANSAGCGGDVNPETDANIMQFRVTKPLAQKDESRKPKYLASYPSVQHERIQNIRTLKLAGTQ------- 378 (513)
T ss_dssp CGGGTTCEEEEEECCCSSSSCCTTTTTEEEEEECCSCCSSCCCCCCCSBCSCCGGGCCCCEEEEEEEEEEEEE-------
T ss_pred CCCCCCcEEEEEecccccccCCCCCCcceEEEEeccCcccCccCCCCccccCCCCcccCCCcceEEEEEEeec-------
Confidence 8554677332 22111 000 0111122 121111 0 0011 000 0011112221110
Q ss_pred HHHHHhCCCCCCCCceEEECCcCCCCCCCCCCCeEEEEEcCCEEEEEEEecCCCceEEEEEcCceEEEEeeCCC------
Q 008799 173 INQATQMGVAPNVSDAHTINGHPGPVTNCTSQGFTLHVESGKTYLLRIVNAAVNDELFFKIAGHNLTVVEVDSS------ 246 (553)
Q Consensus 173 ~~~~~~~g~~~~~~~~~~iNG~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~------ 246 (553)
.......++|||+.+.. ...+.++.|++++|+|.|.+... +-||||||.|+|++.++.
T Consensus 379 ---------~~~g~~~~~iNg~~~~~------~~~~~~~~g~~~~w~l~N~~~~~-HP~HlHG~~F~Vl~~~~~~~~~~~ 442 (513)
T 2wsd_A 379 ---------DEYGRPVLLLNNKRWHD------PVTETPKVGTTEIWSIINPTRGT-HPIHLHLVSFRVLDRRPFDIARYQ 442 (513)
T ss_dssp ---------CTTSCEEEEETTBCTTS------CCCBCCBTTCEEEEEEEECSSSC-EEEEESSCCEEEEEEEEBCHHHHH
T ss_pred ---------CCCCCceEeECCccCCC------cccEecCCCCEEEEEEEcCCCCC-cCEeEeCceEEEEEecCccccccc
Confidence 00011357899997621 14468999999999999998654 559999999999998751
Q ss_pred ---------c------ccceEeeEEEeCCCccEEEEEEeCCCCCeeEEEEeec
Q 008799 247 ---------Y------TKPFKTDTIFIGPGQTTNALLTADKKIGKYLITISPF 284 (553)
Q Consensus 247 ---------~------~~p~~~d~~~l~pgeR~dv~v~~~~~~g~~~i~~~~~ 284 (553)
. -++.+.|++.|.||+++.|.++++..||.|.+|||..
T Consensus 443 ~~~~~~~~~~~~~~~~~~~~~rDTv~v~pg~~~~i~~~f~dnpG~w~~HCHil 495 (513)
T 2wsd_A 443 ESGELSYTGPAVPPPPSEKGWKDTIQAHAGEVLRIAATFGPYSGRYVWHCHAL 495 (513)
T ss_dssp HHCCCCBSSCCBCCCGGGSSCBSEEEECTTEEEEEEEECCSCCEEEEEEESCH
T ss_pred ccccccccCCCCCCCccccCcccEEEeCCCCEEEEEEEecCCCCCEEEEcCCh
Confidence 0 0235899999999999999999954589999999953
No 68
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=99.40 E-value=9e-13 Score=111.30 Aligned_cols=105 Identities=18% Similarity=0.159 Sum_probs=79.6
Q ss_pred EEEEEEEEEEEee-----cccceeeE-EEECCCCCCCeEeecCCCEEEEEEEeCCCCCceeeeCCCcccCCCCCCCCCCc
Q 008799 24 RHYNFTVVMTNMT-----KLCASKSI-VTVNGKFPGPTLHAREDDNVIVRVTNHVKYNVTIHWHGVRQLRTGWYDGPAYI 97 (553)
Q Consensus 24 ~~~~l~~~~~~~~-----~~g~~~~~-~~~NG~~pGP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~ 97 (553)
++|.+.+.+.... ..|..... ..||+++++|.|++++||+|+++++|.... +||+.... .|+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~f~p~~i~v~~G~~V~~~~~n~d~~-----~H~~~i~~----~~~--- 69 (112)
T 1iby_A 2 HNFNVVINAYDTTIPELNVEGVTVKNIRAFNVLNEPETLVVKKGDAVKVVVENKSPI-----SEGFSIDA----FGV--- 69 (112)
T ss_dssp CCEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEESCEEEEETTCEEEEEEEECSSS-----CEEEEEGG----GTE---
T ss_pred CceeEEEEeccCccccEEeccEEEEEEEEEeeEEcCCEEEEeCCCEEEEEEEECCCC-----eEEEEEcC----CCc---
Confidence 4455555554332 23455555 489999988999999999999999999865 55555432 122
Q ss_pred cCCCCCCCCceEEEEEeCCCCcceEEecChhhhhccceeeEEEcC
Q 008799 98 TQCPIQPGQSYVYNFTLTGQRGTLLWHAHISWLRATVHGAIVILP 142 (553)
Q Consensus 98 tq~~i~pG~~~~y~~~~~~~~Gt~wYH~H~~~~~~Gl~G~liV~~ 142 (553)
+..+.||++++|.|++ +++|+||||||.+....+|.|.|+|.+
T Consensus 70 -~~~i~pG~~~~~~f~~-~~~G~y~~~C~~~~~~~~M~g~i~V~~ 112 (112)
T 1iby_A 70 -QEVIKAGETKTISFTA-DKAGAFTIWCQLHPKNIHLPGTLNVVE 112 (112)
T ss_dssp -EEEECTTCEEEEEEEC-CSCEEEEEBCSSSCTTTBCCEEEEEEC
T ss_pred -eeEeCCCCEEEEEEEC-CCCEEEEEECCCCCchHHCEEEEEEeC
Confidence 3568999999999997 799999999998876656999999964
No 69
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A*
Probab=99.39 E-value=5.6e-12 Score=135.14 Aligned_cols=213 Identities=15% Similarity=0.147 Sum_probs=138.1
Q ss_pred eeEEEECCCCCCCeEeecCCCEEEEEEEeCCC-CCceeeeCC---------CcccCCCCCCCCCC-----ccCCCCCCCC
Q 008799 42 KSIVTVNGKFPGPTLHAREDDNVIVRVTNHVK-YNVTIHWHG---------VRQLRTGWYDGPAY-----ITQCPIQPGQ 106 (553)
Q Consensus 42 ~~~~~~NG~~pGP~i~v~~Gd~v~v~l~N~l~-~~~~iH~HG---------~~~~~~~~~DGv~~-----~tq~~i~pG~ 106 (553)
...+++||+. .|.|.|+.| ++|+||.|... ....++++| +.+.. .||... +....|.|||
T Consensus 201 gd~~lvNG~~-~p~~~v~~~-~~RlRliNa~~~~~~~l~i~~~~~~~~~h~~~vIa---~DG~~~~~P~~~~~l~l~pge 275 (534)
T 3abg_A 201 GDVIHVNGQP-WPFKNVEPR-KYRFRFLDAAVSRSFGLYFADTDAIDTRLPFKVIA---SDSGLLEHPADTSLLYISMAE 275 (534)
T ss_dssp CSEEEETTEE-SCBCBCCSS-EEEEEEEECCSSCCEEEEECCSSSTTCCCCEEEEE---ETTEEEEEEEEESCEEECTTC
T ss_pred CceeccCCcc-CceEEecCc-EEEEEEEecCCcceEEEEEecccCcCCCccEEEEE---eCCCcccCceEeceEEECCcc
Confidence 5689999996 699999985 99999999984 556888876 22332 688521 3346689999
Q ss_pred ceEEEEEeCCCCc-ceEEecChhhhh--------ccceeeEEEcCCCCC----CCCCCCCC-----------cceEEEEe
Q 008799 107 SYVYNFTLTGQRG-TLLWHAHISWLR--------ATVHGAIVILPKRSV----PYPFPKAD-----------KEKIIVFG 162 (553)
Q Consensus 107 ~~~y~~~~~~~~G-t~wYH~H~~~~~--------~Gl~G~liV~~~~~~----~~~~~~~~-----------~e~~l~~~ 162 (553)
|++..+++++.+| +||......... ......+-....... ....+... .+..+.+
T Consensus 276 R~dvlv~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~P~~L~~~~~p~~~~~~~~~~~~- 354 (534)
T 3abg_A 276 RYEVVFDFSDYAGKTIELRNLGGSIGGIGTDTDYDNTDKVMRFVVADDTTQPDTSVVPANLRDVPFPSPTTNTPRQFRF- 354 (534)
T ss_dssp EEEEEEECSSCTTSEEEEECCCCSSSSCCSCSSSTTTSEEEEEECCCCSSCSCCCCCCCCCCCCSCCCCCCCCCEEEEC-
T ss_pred EEEEEEEcCCCCCceEEEEeccccccccccccCcCCcceeEEEecCCCCcCCCCCCCccccccCCCCCCccccceEEEE-
Confidence 9999999855578 588765321100 001112221111100 00000000 0000000
Q ss_pred eeeccCHHHHHHHHHhCCCCCCCCceEEECCcCCCCCCCCCCCeEEEEEcCCEEEEEEEecCCCceEEEEEcCceEEEEe
Q 008799 163 EWWKADVEAVINQATQMGVAPNVSDAHTINGHPGPVTNCTSQGFTLHVESGKTYLLRIVNAAVNDELFFKIAGHNLTVVE 242 (553)
Q Consensus 163 d~~~~~~~~~~~~~~~~g~~~~~~~~~~iNG~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via 242 (553)
+ .....|+|||+.+... .....+.++.|++++|.|.|.+....|-||||||.|+|++
T Consensus 355 -----------------~---~~~~~w~iNG~~f~~~---~~p~l~~v~~G~~~~w~i~N~~~~~~HP~HLHG~~F~Vl~ 411 (534)
T 3abg_A 355 -----------------G---RTGPTWTINGVAFADV---QNRLLANVPVGTVERWELINAGNGWTHPIHIHLVDFKVIS 411 (534)
T ss_dssp -----------------S---CCCSTTCCCCBTTBCT---TSCCCCEECTTCEEEEEEEECSSSCCCCEEESSCCEEEEE
T ss_pred -----------------e---ccCceeEECCcccCCC---CCcceeeccCCCEEEEEEEcCCCCCCcCEEECCeeEEEEE
Confidence 0 0113578999976321 0113468999999999999998654555999999999999
Q ss_pred e-CCC---cccc---eEeeEEEeCCCccEEEEEE-eCCCCCeeEEEEeec
Q 008799 243 V-DSS---YTKP---FKTDTIFIGPGQTTNALLT-ADKKIGKYLITISPF 284 (553)
Q Consensus 243 ~-DG~---~~~p---~~~d~~~l~pgeR~dv~v~-~~~~~g~~~i~~~~~ 284 (553)
. +|. ...+ .+.|++.|.||+++.|.+. +++ ||.|.+|||..
T Consensus 412 ~~~g~~~~~~~~~~~~~rDTV~v~pg~~v~I~~~~adn-pG~w~~HCHil 460 (534)
T 3abg_A 412 RTSGNNARTVMPYESGLKDVVWLGRRETVVVEAHYAPF-PGVYMFHCHNL 460 (534)
T ss_dssp ESSCCSSSCCCSGGGSCBSEECCCSSEEEEEEEECCSC-CEEEEEEESCH
T ss_pred EcCCCCcCcCCccccCCcCeEEcCCCCEEEEEEEECCC-CccEEEecChH
Confidence 8 663 1112 5689999999999999998 565 89999999953
No 70
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A
Probab=99.38 E-value=1.3e-12 Score=116.38 Aligned_cols=99 Identities=18% Similarity=0.108 Sum_probs=71.4
Q ss_pred ccceeeEEEECCCCCCCeEeecCCCEEEEEEEeCCCCCceeeeCCCcccCCCCCCC------CCCcc-CCCCCCCC--ce
Q 008799 38 LCASKSIVTVNGKFPGPTLHAREDDNVIVRVTNHVKYNVTIHWHGVRQLRTGWYDG------PAYIT-QCPIQPGQ--SY 108 (553)
Q Consensus 38 ~g~~~~~~~~NG~~pGP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DG------v~~~t-q~~i~pG~--~~ 108 (553)
.++....+.++|. ++|+|+|++||+|+|+++|... ...|.+.+...+.++.+. .++.. ...|.||+ +.
T Consensus 46 ~~~~~~~~~~~g~-~~p~i~V~~GD~V~~~~tN~~~--~~~H~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~PG~sgt~ 122 (154)
T 2cal_A 46 PGFPFPSFEVHDK-KNPTLEIPAGATVDVTFINTNK--GFGHSFDITKKGPPYAVMPVIDPIVAGTGFSPVPKDGKFGYT 122 (154)
T ss_dssp TTSCSSCEEETTE-ESCEEEECTTCEEEEEEEECCT--TCCCCCEEESCCSCCCSSCCCCSEEEEBCCCCCCBTTBEEEE
T ss_pred cCCccccccccCC-CCCEEEEeCCCEEEEEEEcCCC--CeeeEEEEeecCcchhccccccccccccccccccCCCCceEE
Confidence 3455555666776 5799999999999999999743 346666666544433221 00000 02689999 99
Q ss_pred EEEEEeCCCCcceEEecChhhhh-ccceeeEEEc
Q 008799 109 VYNFTLTGQRGTLLWHAHISWLR-ATVHGAIVIL 141 (553)
Q Consensus 109 ~y~~~~~~~~Gt~wYH~H~~~~~-~Gl~G~liV~ 141 (553)
+|.|++ ++|+||||||..++. +||.|.|+|+
T Consensus 123 t~tft~--~pGtY~y~C~~~gH~~~GM~G~IiV~ 154 (154)
T 2cal_A 123 DFTWHP--TAGTYYYVCQIPGMAATGMFGKIVVK 154 (154)
T ss_dssp EEEECC--CSEEEEEECCSTTTGGGTCEEEEEEC
T ss_pred EEEEEE--CCceEEEECCCCCHHHCCCEEEEEEC
Confidence 999985 899999999987766 8999999985
No 71
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada}
Probab=99.31 E-value=1.8e-10 Score=123.91 Aligned_cols=235 Identities=13% Similarity=0.009 Sum_probs=143.1
Q ss_pred eeEEEECCCCC----------------CCeEeecCCCEEEEEEEeCCC-CCceeeeCCCcccCCCCCCCCCC----ccCC
Q 008799 42 KSIVTVNGKFP----------------GPTLHAREDDNVIVRVTNHVK-YNVTIHWHGVRQLRTGWYDGPAY----ITQC 100 (553)
Q Consensus 42 ~~~~~~NG~~p----------------GP~i~v~~Gd~v~v~l~N~l~-~~~~iH~HG~~~~~~~~~DGv~~----~tq~ 100 (553)
...+++||+.. .++|+|++|+++|+||.|... ....+|.+|....-.. .||.+. +...
T Consensus 225 ~d~~liNG~~~~~c~~~~~~~~~~~~~~~~~~v~~G~~yRlRlINa~~~~~~~~~i~gh~~~VIa-~DG~~v~P~~~~~l 303 (580)
T 3sqr_A 225 LENTLMNGTNTFDCSASTDPNCVGGGKKFELTFVEGTKYRLRLINVGIDSHFEFAIDNHTLTVIA-NDLVPIVPYTTDTL 303 (580)
T ss_dssp BSEEEETTBCCCCCTTCCCTTBCCCCCCCEEECCTTCEEEEEEEECCSSCCEEEEETTCCEEEEE-ETTEEEEEEEESSE
T ss_pred CceEEECCcccCCCccccccccccCCCceeEEEcCCCEEEEEEEeccCCceeeEEeCCceEEEEE-eCCccCCceEeeEE
Confidence 45688999742 379999999999999999984 4568888887643321 688642 2235
Q ss_pred CCCCCCceEEEEEeCCCCcceEEecChhh-----hhccceeeEEEcCCCCCCCCCC-C-CCcceEEEEee--eeccC--H
Q 008799 101 PIQPGQSYVYNFTLTGQRGTLLWHAHISW-----LRATVHGAIVILPKRSVPYPFP-K-ADKEKIIVFGE--WWKAD--V 169 (553)
Q Consensus 101 ~i~pG~~~~y~~~~~~~~Gt~wYH~H~~~-----~~~Gl~G~liV~~~~~~~~~~~-~-~~~e~~l~~~d--~~~~~--~ 169 (553)
.|.||||++..+++++.+|.||..+.... ...+-.-+++.........|.. . ...+.. +.+ ..... .
T Consensus 304 ~i~pGqRydVlv~a~~~~g~Y~i~a~~~~~~~~~~~~~~~~aiL~Y~~~~~~~P~~~~~~~~~~~--~~~~~~~L~P~~~ 381 (580)
T 3sqr_A 304 LIGIGQRYDVIVEANAAADNYWIRGNWGTTCSTNNEAANATGILRYDSSSIANPTSVGTTPRGTC--EDEPVASLVPHLA 381 (580)
T ss_dssp EECTTCEEEEEEECCSCSSEEEEECCCCTTTSCBTTGGGCEEEEESSTTCCCCCCCCCCCCCCCS--CCSCGGGCCBSSC
T ss_pred EEccceEEEEEEEeCCCCCeEEEEEecccccCccCCCCceEEEEEECCCCCCCCCCCCCCccchh--hcccccccccCCC
Confidence 68999999999999767899999987532 1122222344433221111100 0 000000 000 00000 0
Q ss_pred HHHHHHH-----HhCCCCCCCCceEEECCcCCCC-C---------CCCCC----CeEEEE----EcCCEEEEEEEecC--
Q 008799 170 EAVINQA-----TQMGVAPNVSDAHTINGHPGPV-T---------NCTSQ----GFTLHV----ESGKTYLLRIVNAA-- 224 (553)
Q Consensus 170 ~~~~~~~-----~~~g~~~~~~~~~~iNG~~~~~-~---------~~~~~----~~~~~v----~~G~~~rlRliN~~-- 224 (553)
....... ...+ ......|.|||..+.. . ..... ...+.+ +.|+++.|.|-|.+
T Consensus 382 ~~~~~~~~~~~~l~~~--~~~~~~w~iN~~s~~~~~~~P~L~~~~~g~~~~~~~~~~~~~~~~~~~~~~VeiVi~n~~~~ 459 (580)
T 3sqr_A 382 LDVGGYSLVDEQVSSA--FTNYFTWTINSSSLLLDWSSPTTLKIFNNETIFPTEYNVVALEQTNANEEWVVYVIEDLTGF 459 (580)
T ss_dssp CBCCSEEEEEEEEEEE--ESSSEEEEETTBCCCCCTTSCHHHHHHTTCCCCCGGGCEEEECC----CCEEEEEEEECSSS
T ss_pred CCCCCccceEEEEEec--cCCceeEEECCEecccCCCCCchhhhhcCCccCCCCcceeecccccCCCcEEEEEEeCCCcc
Confidence 0000000 0000 0012357889986521 0 00000 023444 45999999999987
Q ss_pred CCceEEEEEcCceEEEEeeCCC------------cccceEeeEEEeCCCccEEEEEEeCCCCCeeEEEEee
Q 008799 225 VNDELFFKIAGHNLTVVEVDSS------------YTKPFKTDTIFIGPGQTTNALLTADKKIGKYLITISP 283 (553)
Q Consensus 225 ~~~~~~~~i~gh~~~via~DG~------------~~~p~~~d~~~l~pgeR~dv~v~~~~~~g~~~i~~~~ 283 (553)
.. .+-||||||.|+|++.+.+ +..|...|++.+.|++.+.|.+++++ ||.|.+|||-
T Consensus 460 ~~-~HP~HLHGh~F~vv~~g~G~f~~~~~~~~~nl~nP~~rDTv~v~~~g~~~irf~adN-PG~W~~HCHi 528 (580)
T 3sqr_A 460 GI-WHPIHLHGHDFFIVAQETDVFNSDESPAKFNLVNPPRRDVAALPGNGYLAIAFKLDN-PGSWLLHCHI 528 (580)
T ss_dssp CC-CEEEEESSCCEEEEEEESSCCCTTTSGGGCCCBSCCEESEEEECTTSEEEEEEESCS-CEEEEEEECS
T ss_pred cc-ceeeEecCceEEEEecCCCccCccccccccccCCCceeeEEEeCCCceEEEEEEcCC-CeeeEEEECc
Confidence 44 5559999999999998432 12578899999999999999999997 7999999994
No 72
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor}
Probab=99.26 E-value=1.6e-11 Score=124.34 Aligned_cols=100 Identities=22% Similarity=0.350 Sum_probs=80.4
Q ss_pred EEECCCC--CCCeEeecCCCEEEEEEEeCCCCCceeeeCCCcccCCCCCCCC---C----C-ccCCCCCCCCceEEEEEe
Q 008799 45 VTVNGKF--PGPTLHAREDDNVIVRVTNHVKYNVTIHWHGVRQLRTGWYDGP---A----Y-ITQCPIQPGQSYVYNFTL 114 (553)
Q Consensus 45 ~~~NG~~--pGP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv---~----~-~tq~~i~pG~~~~y~~~~ 114 (553)
|+|||+. ..|.|++++||+|+++|.|.....+.+|+||....-. .+|. | . .....|.||++++|.|+.
T Consensus 198 ~~iNG~~~~~~~~l~v~~Ge~vri~l~N~g~~~HpfHlHGh~f~v~--~~G~~~~p~~~~~~~Dtv~v~PG~~~~v~~~~ 275 (343)
T 3cg8_A 198 MTINNRKPHTGPDFEATVGDRVEIVMITHGEYYHTFHMHGHRWADN--RTGILTGPDDPSRVIDNKITGPADSFGFQIIA 275 (343)
T ss_dssp TEETTCCTTCCCCEEEETTCEEEEEEEEESSCCEEEEETTCCEESS--SSSSCCSTTCCCCEESEEEECTTCEEEEEEET
T ss_pred ceecccCCCCCccEEeCCCCEEEEEEEcCCccccccEecCcEEEEe--ccCcccCCCCcccceeeEEeCCCCEEEEEEEE
Confidence 5899986 3589999999999999999999999999999863322 2332 1 1 122468999999999996
Q ss_pred --CCCCcceEEecChhhhh-ccceeeEEEcCCCCC
Q 008799 115 --TGQRGTLLWHAHISWLR-ATVHGAIVILPKRSV 146 (553)
Q Consensus 115 --~~~~Gt~wYH~H~~~~~-~Gl~G~liV~~~~~~ 146 (553)
.+.+|+|+||||..... .||.|.++|.+++..
T Consensus 276 ~~~~~pG~w~~HCHi~~H~~~GM~g~~~V~~~~~~ 310 (343)
T 3cg8_A 276 GEGVGAGAWMYHCHVQSHSDMGMVGLFLVKKPDGT 310 (343)
T ss_dssp TTTTCSEEEEEEECSHHHHHTTCEEEEEEECTTSC
T ss_pred CCCCCCeeEEEeCCCHHHHhccCcEEEEEecCCCC
Confidence 26899999999987665 899999999987654
No 73
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.22 E-value=2e-11 Score=130.09 Aligned_cols=96 Identities=21% Similarity=0.251 Sum_probs=75.4
Q ss_pred ccceeeEEEECCCCCCCeEeecCCCEEEEEEEeCCCCCceeeeCCCcccCCCCCCCCCCccCCCCCCCCceEEEEEeCCC
Q 008799 38 LCASKSIVTVNGKFPGPTLHAREDDNVIVRVTNHVKYNVTIHWHGVRQLRTGWYDGPAYITQCPIQPGQSYVYNFTLTGQ 117 (553)
Q Consensus 38 ~g~~~~~~~~NG~~pGP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~pG~~~~y~~~~~~~ 117 (553)
++....+|++|+++++|+|++++||+|+++|+|.+...-. +||+.+.. .|+ +..+.||++++|.|++ ++
T Consensus 497 ~~v~V~m~~~n~~f~pp~I~V~~Gd~V~~~ltN~d~~~Dv--~Hgf~ip~----~gv----~~~i~PG~t~t~~Fta-~~ 565 (595)
T 1fwx_A 497 NKVRVYMSSVAPSFSIESFTVKEGDEVTVIVTNLDEIDDL--THGFTMGN----YGV----AMEIGPQMTSSVTFVA-AN 565 (595)
T ss_dssp TEEEEEEEEETTEESCSEEEEETTCEEEEEEEECCCSTTC--CEEEEETT----TTE----EEEECTTCEEEEEEEC-CS
T ss_pred CccceeEEEecCcccCCEEEEECCCEEEEEEEeCCCCCCc--eeeEEecC----CCc----ceeeCCCCeEEEEEEC-CC
Confidence 3477889999999999999999999999999998753222 36665442 232 1568999999999998 89
Q ss_pred CcceEEecCh-hh-hhccceeeEEEcCCC
Q 008799 118 RGTLLWHAHI-SW-LRATVHGAIVILPKR 144 (553)
Q Consensus 118 ~Gt~wYH~H~-~~-~~~Gl~G~liV~~~~ 144 (553)
+|+||||||. .+ ...||+|.|+|++++
T Consensus 566 pGtY~yhC~e~Cg~~H~gM~G~IiV~p~~ 594 (595)
T 1fwx_A 566 PGVYWYYCQWFCHALHMEMRGRMLVEPKE 594 (595)
T ss_dssp CEEEEEECCSCCSTTCTTCEEEEEEECC-
T ss_pred CEEEEEECCCCCCCCccCCEEEEEEEcCC
Confidence 9999999993 22 226999999999764
No 74
>3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus}
Probab=99.19 E-value=3.7e-10 Score=123.98 Aligned_cols=91 Identities=11% Similarity=0.062 Sum_probs=72.6
Q ss_pred ceEEECCcCCCCCCCCCCCeEEEEEcCCEEEEEEEecCCCceEEEEEcCceEEEEeeCCCcc------------------
Q 008799 187 DAHTINGHPGPVTNCTSQGFTLHVESGKTYLLRIVNAAVNDELFFKIAGHNLTVVEVDSSYT------------------ 248 (553)
Q Consensus 187 ~~~~iNG~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~------------------ 248 (553)
..+.+||+.+.. ...+.++.|++++|.|+|.+...|. ||||||.|+|++.+|...
T Consensus 459 ~~~~~n~~~~~~------~~~~~~~~g~~~~w~i~N~~~~~HP-~HLHG~~F~Vl~~~g~~~~~~~~~~~~~~~~~~~~~ 531 (612)
T 3gyr_A 459 KTYRRTARTFND------GLGFTIGEGTHEQWTFLNLSPILHP-MHIHLADFQVLGRDAYDASGFDLALGGTRTPVRLDP 531 (612)
T ss_dssp EEEEEEECSTTS------CCCEEEETTCEEEEEEEECSSSCEE-EEESSCEEEEEEEEEEECTTEETTTTEESSCEEEEE
T ss_pred ccccccCccCCC------CcceEeCCCCEEEEEEEcCCCCCcC-EeECCCcEEEEeecCCcCcccccccccccccccccc
Confidence 356777775421 1568999999999999999976665 999999999998765321
Q ss_pred ---------cceEeeEEEeCCCccEEEEEEeCCCCCeeEEEEeec
Q 008799 249 ---------KPFKTDTIFIGPGQTTNALLTADKKIGKYLITISPF 284 (553)
Q Consensus 249 ---------~p~~~d~~~l~pgeR~dv~v~~~~~~g~~~i~~~~~ 284 (553)
++.++|++.|.+|+.+.|.+++...||.|.+|||-.
T Consensus 532 ~~~~~~~~~~~~~kDTv~v~~~~~v~i~~rfadnpG~w~~HCHil 576 (612)
T 3gyr_A 532 DTPVPLAPNELGHKDVFQVPGPQGLRVMGKFDGAYGRFMYHCHLL 576 (612)
T ss_dssp EEECCCCTTCSSCBSEEEECSSEEEEEEEECCSCCEEEEEEESSH
T ss_pred ccccCcccccCCCCcEEEECCCCEEEEEEEeCCCCcceEEcCCCh
Confidence 223589999999999999999655589999999953
No 75
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ...
Probab=99.15 E-value=1.4e-10 Score=96.42 Aligned_cols=79 Identities=23% Similarity=0.312 Sum_probs=62.9
Q ss_pred CCCCCCCeEeecCCCEEEEEEEeCCCCCceeeeCCCcccCCCCCCCCCCccCCCCCCCCceEEEEEeCCCCcceEEecCh
Q 008799 48 NGKFPGPTLHAREDDNVIVRVTNHVKYNVTIHWHGVRQLRTGWYDGPAYITQCPIQPGQSYVYNFTLTGQRGTLLWHAHI 127 (553)
Q Consensus 48 NG~~pGP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~pG~~~~y~~~~~~~~Gt~wYH~H~ 127 (553)
+..|..+.|++++||+|++ +|....++++|+++. .||.....+..+.||++++|.| +.+|+|||||+.
T Consensus 27 ~~~F~P~~i~v~~Gd~V~~--~N~d~~~H~v~~~~~-------~~g~~~~~~~~~~pG~~~~~tf---~~~G~y~y~C~~ 94 (105)
T 2ov0_A 27 KMKYETPELHVKVGDTVTW--INREAMPHNVHFVAG-------VLGEAALKGPMMKKEQAYSLTF---TEAGTYDYHCTP 94 (105)
T ss_dssp TTEESSSEEEECTTCEEEE--EECSSSCBCCEECTT-------TSSSSCEECCCBCTTEEEEEEE---CSCEEEEEECSS
T ss_pred ecEEcCCEEEECCCCEEEE--EECCCCCEEEEEcCC-------CCCcccccccccCCCCEEEEEe---CCCEEEEEEeCC
Confidence 3455568999999999655 699888999999852 3555444455689999999888 579999999988
Q ss_pred hhhhccceeeEEEc
Q 008799 128 SWLRATVHGAIVIL 141 (553)
Q Consensus 128 ~~~~~Gl~G~liV~ 141 (553)
|. ||.|.|+|+
T Consensus 95 H~---gM~G~i~V~ 105 (105)
T 2ov0_A 95 HP---FMRGKVVVE 105 (105)
T ss_dssp CT---TCEEEEEEC
T ss_pred CC---CCEEEEEEC
Confidence 65 999999985
No 76
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=99.11 E-value=2.4e-10 Score=100.25 Aligned_cols=94 Identities=15% Similarity=0.183 Sum_probs=70.8
Q ss_pred EEEecCCCEEEEEEEcCCCCCCC-CCCeeecCCceEEE--------eeCC-CCCCCCCCCCCCCCCCCCcceeeEecCCc
Q 008799 430 LYRLAYNSTVQLVLQGTTVIAPE-NHPTHLHGFNFFAV--------GKGS-GNFDPNKDPQKFNLVDPVERNTISVPTAG 499 (553)
Q Consensus 430 ~~~~~~g~~v~~~i~n~~~~~~~-~HP~HlHG~~f~Vl--------~~g~-g~~~~~~~~~~~~~~~p~~rDTv~vp~~g 499 (553)
.+.++.|++|+|++.|.+ .. .|.||+|+....+. ..+. ..|.+.. ....++||..|.|++
T Consensus 36 ~i~v~~G~~V~~~~~N~~---~~~~H~~~i~~~~~~~~~~~~~~~~~~g~~~~~~p~~-------~~~~~~~t~~l~pGe 105 (139)
T 2aan_A 36 ELTVSAGQTVTIRFKNNS---AVQQHNWILVKGGEAEAANIANAGLSAGPAANYLPAD-------KSNIIAESPLANGNE 105 (139)
T ss_dssp EEEECTTCEEEEEEECCC---SSCCBCCEEESSCHHHHHHHHHHHHHHCGGGTTCCSC-------CTTEEEECCCBCTTC
T ss_pred eEEECCCCEEEEEEEeCC---CCCCeeEEEeccccccchhhhhhhhcccccccccCcc-------cccccccccccCCCC
Confidence 468899999999999964 45 79999997643111 0000 0111110 123578999999999
Q ss_pred EEEEEEEecCceeeEEeecchhhHhccceEEEEEe
Q 008799 500 WTAIRFRADNPGVWFLHCHLEVHTSWGLKMAFVVD 534 (553)
Q Consensus 500 ~~~irf~adnpG~w~~HCHil~H~d~GM~~~~~V~ 534 (553)
...+.|++++||.|.||||+..|.+ ||+..|.|+
T Consensus 106 t~~v~f~~~~pG~y~f~C~~~~H~~-GM~G~i~V~ 139 (139)
T 2aan_A 106 TVEVTFTAPAAGTYLYICTVPGHYP-LMQGKLVVN 139 (139)
T ss_dssp EEEEEEECCSSEEEEEECCSTTTTT-TSEEEEEEC
T ss_pred EEEEEEECCCCeEEEEEcCCCChHH-cCEEEEEEC
Confidence 9999999999999999999999999 999999884
No 77
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A
Probab=99.08 E-value=2.6e-10 Score=94.80 Aligned_cols=85 Identities=14% Similarity=0.153 Sum_probs=64.6
Q ss_pred EEEecCCCEEEEEEEcCCCCCCCCCCeeecCCceEEEeeCCCCCCCCCCCCCCCCCCCCcceeeEecCCcEEEEEEEe-c
Q 008799 430 LYRLAYNSTVQLVLQGTTVIAPENHPTHLHGFNFFAVGKGSGNFDPNKDPQKFNLVDPVERNTISVPTAGWTAIRFRA-D 508 (553)
Q Consensus 430 ~~~~~~g~~v~~~i~n~~~~~~~~HP~HlHG~~f~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~a-d 508 (553)
.+.++.|++|+|+ |.. ...|++|+||..+... . |. + .+...+++..++||+...++|.+ +
T Consensus 20 ~i~v~~Gd~V~~~--N~~---~~~H~v~~~~~~~~~~--~-g~----------~-~~~~~~~~~~i~pG~~~~~~f~~~~ 80 (105)
T 3cvb_A 20 NVTVHPGDTVKWV--NNK---LPPHNILFDDKQVPGA--S-KE----------L-ADKLSHSQLMFSPGESYEITFSSDF 80 (105)
T ss_dssp EEEECTTEEEEEE--ECS---SCCEEEEECTTSSGGG--C-HH----------H-HHHHCEEEEECSTTCEEEEEECTTS
T ss_pred EEEEcCCCEEEEE--ECC---CCCCeEEEeCCCCCcc--c-cc----------c-cccccccccccCCCCeEEEEEecCC
Confidence 4688999999874 643 5689999999766321 0 00 0 00112578899999999999998 7
Q ss_pred CceeeEEeecchhhHhccceEEEEEeC
Q 008799 509 NPGVWFLHCHLEVHTSWGLKMAFVVDN 535 (553)
Q Consensus 509 npG~w~~HCHil~H~d~GM~~~~~V~~ 535 (553)
.||.|.|||| .|...||+..|.|++
T Consensus 81 ~~G~y~y~C~--~H~~~GM~G~i~V~~ 105 (105)
T 3cvb_A 81 PAGTYTYYCA--PHRGAGMVGKITVEG 105 (105)
T ss_dssp CSEEEEEECT--TTGGGTCEEEEEECC
T ss_pred CCeeEEEEeC--CchhcCCEEEEEEcC
Confidence 9999999999 799999999999863
No 78
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A
Probab=98.94 E-value=2.4e-09 Score=89.04 Aligned_cols=83 Identities=17% Similarity=0.155 Sum_probs=60.8
Q ss_pred CeEeecCCCEEEEEEEeCCCCCceeeeCCCcccCCCCCCCCC----CccCCCCCCCCceEEEEEeCCCCcceEEecChhh
Q 008799 54 PTLHAREDDNVIVRVTNHVKYNVTIHWHGVRQLRTGWYDGPA----YITQCPIQPGQSYVYNFTLTGQRGTLLWHAHISW 129 (553)
Q Consensus 54 P~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~----~~tq~~i~pG~~~~y~~~~~~~~Gt~wYH~H~~~ 129 (553)
+.|++++||+|++ .|....++++|.|+...+. .+|.. ......+.||++++|.|++++.+|+|||||| ..
T Consensus 20 ~~i~v~~Gd~V~~--~n~~~~~H~~~~~~~~~~~---~~g~~~~~~~~~~~~~~pG~~~~~~f~~~~~~G~y~y~C~-~H 93 (106)
T 2gim_A 20 AKLTIKPGDTVEF--LNNKVPPHNVVFDAALNPA---KSADLAKSLSHKQLLMSPGQSTSTTFPADAPAGEYTFYCE-PH 93 (106)
T ss_dssp SEEEECTTCEEEE--EECSSSCCCBEECSSSSTT---CCHHHHHHHCBCSCCCSTTCEEEEECCTTCCSEEEEEECT-TT
T ss_pred CEEEECCCCEEEE--EECCCCCceEEEeCCCCcc---cccccchhccccceeeCCCCEEEEEEecCCCCceEEEEeC-Ch
Confidence 7999999998755 5887778889988765321 12210 0112458999999999975468999999999 22
Q ss_pred hhccceeeEEEcC
Q 008799 130 LRATVHGAIVILP 142 (553)
Q Consensus 130 ~~~Gl~G~liV~~ 142 (553)
..+||.|.|+|++
T Consensus 94 ~~~GM~G~i~V~~ 106 (106)
T 2gim_A 94 RGAGMVGKITVAG 106 (106)
T ss_dssp GGGTCEEEEEECC
T ss_pred hhcCcEEEEEEcC
Confidence 3369999999963
No 79
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=98.85 E-value=1.7e-08 Score=88.34 Aligned_cols=91 Identities=13% Similarity=0.127 Sum_probs=65.4
Q ss_pred CCCCCeEeecCCCEEEEEEEeCCCC-CceeeeCCCccc------------C--CCC-CCCCCC--ccCCCCCCCCceEEE
Q 008799 50 KFPGPTLHAREDDNVIVRVTNHVKY-NVTIHWHGVRQL------------R--TGW-YDGPAY--ITQCPIQPGQSYVYN 111 (553)
Q Consensus 50 ~~pGP~i~v~~Gd~v~v~l~N~l~~-~~~iH~HG~~~~------------~--~~~-~DGv~~--~tq~~i~pG~~~~y~ 111 (553)
+|--+.|+|++||+|+++++|.... +++++.|+.... . ..+ .++.+. .....|.||+++++.
T Consensus 31 ~F~p~~i~v~~G~~V~~~~~N~~~~~~H~~~i~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~t~~l~pGet~~v~ 110 (139)
T 2aan_A 31 AFDKTELTVSAGQTVTIRFKNNSAVQQHNWILVKGGEAEAANIANAGLSAGPAANYLPADKSNIIAESPLANGNETVEVT 110 (139)
T ss_dssp SBSCSEEEECTTCEEEEEEECCCSSCCBCCEEESSCHHHHHHHHHHHHHHCGGGTTCCSCCTTEEEECCCBCTTCEEEEE
T ss_pred EEcCCeEEECCCCEEEEEEEeCCCCCCeeEEEeccccccchhhhhhhhcccccccccCcccccccccccccCCCCEEEEE
Confidence 3433799999999999999999877 888888874310 0 000 001000 011348999999999
Q ss_pred EEeCCCCcceEEecChhhhhccceeeEEEc
Q 008799 112 FTLTGQRGTLLWHAHISWLRATVHGAIVIL 141 (553)
Q Consensus 112 ~~~~~~~Gt~wYH~H~~~~~~Gl~G~liV~ 141 (553)
|++ +.+|+|+||||......||.|.|+|+
T Consensus 111 f~~-~~pG~y~f~C~~~~H~~GM~G~i~V~ 139 (139)
T 2aan_A 111 FTA-PAAGTYLYICTVPGHYPLMQGKLVVN 139 (139)
T ss_dssp EEC-CSSEEEEEECCSTTTTTTSEEEEEEC
T ss_pred EEC-CCCeEEEEEcCCCChHHcCEEEEEEC
Confidence 997 68999999999765544999999984
No 80
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A
Probab=98.78 E-value=1.5e-08 Score=84.12 Aligned_cols=83 Identities=17% Similarity=0.211 Sum_probs=61.8
Q ss_pred EEEecCCCEEEEEEEcCCCCCCCCCCeeecCCceEEEeeCCCCCCCCCCCCCCCCCCC-CcceeeEecCCcEEEEEEEe-
Q 008799 430 LYRLAYNSTVQLVLQGTTVIAPENHPTHLHGFNFFAVGKGSGNFDPNKDPQKFNLVDP-VERNTISVPTAGWTAIRFRA- 507 (553)
Q Consensus 430 ~~~~~~g~~v~~~i~n~~~~~~~~HP~HlHG~~f~Vl~~g~g~~~~~~~~~~~~~~~p-~~rDTv~vp~~g~~~irf~a- 507 (553)
.+.++.|++|.|+ |.+ ...|++|+|+..+.. . .|. ..+ ..+|++.+.||+...+.|.+
T Consensus 21 ~i~v~~Gd~V~~~--n~~---~~~H~~~~~~~~~~~--~-~g~------------~~~~~~~~~~~~~pG~~~~~~f~~~ 80 (106)
T 2gim_A 21 KLTIKPGDTVEFL--NNK---VPPHNVVFDAALNPA--K-SAD------------LAKSLSHKQLLMSPGQSTSTTFPAD 80 (106)
T ss_dssp EEEECTTCEEEEE--ECS---SSCCCBEECSSSSTT--C-CHH------------HHHHHCBCSCCCSTTCEEEEECCTT
T ss_pred EEEECCCCEEEEE--ECC---CCCceEEEeCCCCcc--c-ccc------------cchhccccceeeCCCCEEEEEEecC
Confidence 4688999999986 532 467999999754310 0 000 000 11467789999999999988
Q ss_pred cCceeeEEeecchhhHhccceEEEEEe
Q 008799 508 DNPGVWFLHCHLEVHTSWGLKMAFVVD 534 (553)
Q Consensus 508 dnpG~w~~HCHil~H~d~GM~~~~~V~ 534 (553)
+.||.|.|||| .|.++||...+.|+
T Consensus 81 ~~~G~y~y~C~--~H~~~GM~G~i~V~ 105 (106)
T 2gim_A 81 APAGEYTFYCE--PHRGAGMVGKITVA 105 (106)
T ss_dssp CCSEEEEEECT--TTGGGTCEEEEEEC
T ss_pred CCCceEEEEeC--ChhhcCcEEEEEEc
Confidence 79999999999 89999999999986
No 81
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A
Probab=98.70 E-value=9.8e-08 Score=83.56 Aligned_cols=89 Identities=17% Similarity=0.150 Sum_probs=63.4
Q ss_pred CCeEeecCCCEEEEEEEe--CCCCCceeeeCCCc------------c----cCCCCCCCCCCc-cCCCCCCCCceEEEEE
Q 008799 53 GPTLHAREDDNVIVRVTN--HVKYNVTIHWHGVR------------Q----LRTGWYDGPAYI-TQCPIQPGQSYVYNFT 113 (553)
Q Consensus 53 GP~i~v~~Gd~v~v~l~N--~l~~~~~iH~HG~~------------~----~~~~~~DGv~~~-tq~~i~pG~~~~y~~~ 113 (553)
.+.|+|++||+|+++++| .....++++.+... . ...+..|....+ ....|.||++.++.|+
T Consensus 32 P~~i~v~~G~tV~~~~~N~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~pG~~~~~~~~ 111 (140)
T 1qhq_A 32 QTSLSLPANTVVRLDFVNQNNLGVQHNWVLVNGGDDVAAAVNTAAQNNADALFVPPPDTPNALAWTAMLNAGESGSVTFR 111 (140)
T ss_dssp CSEEEEETTCEEEEEEEECCSSCCCBCCEEESSSHHHHHHHHHHHHTCGGGTTCCCTTCTTEEEECCCBCTTEEEEEEEE
T ss_pred CCeEEECCCCEEEEEEECCCCCCCceeEEEeccCcchhhhhhhhhhhcccccccCccccccccccceeeCCCceeEEEEE
Confidence 379999999999999999 66677887776321 0 000000110000 0135899999999999
Q ss_pred eCCCCcceEEecChhhhh-ccceeeEEEcC
Q 008799 114 LTGQRGTLLWHAHISWLR-ATVHGAIVILP 142 (553)
Q Consensus 114 ~~~~~Gt~wYH~H~~~~~-~Gl~G~liV~~ 142 (553)
+ +.+|+|||||+..+.. .||.|.|+|.+
T Consensus 112 ~-~~~G~y~f~C~~~~H~~~GM~g~i~V~p 140 (140)
T 1qhq_A 112 T-PAPGTYLYICTFPGHYLAGMKGTLTVTP 140 (140)
T ss_dssp C-CSSEEEEEECCSTTTTTTTCEEEEEEEC
T ss_pred e-CCCeeEEEEeCCcCHhhcCCEEEEEEcC
Confidence 8 7899999999986555 79999999964
No 82
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=98.69 E-value=4.8e-08 Score=80.18 Aligned_cols=79 Identities=10% Similarity=0.103 Sum_probs=62.5
Q ss_pred CCCCCCCeEeecCCCEEEEEEEeCCCCCceeeeCCCcccCCCCCCCCCCccCCCCCCCCceEEEEEeCCCCcceEEecCh
Q 008799 48 NGKFPGPTLHAREDDNVIVRVTNHVKYNVTIHWHGVRQLRTGWYDGPAYITQCPIQPGQSYVYNFTLTGQRGTLLWHAHI 127 (553)
Q Consensus 48 NG~~pGP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~pG~~~~y~~~~~~~~Gt~wYH~H~ 127 (553)
|..|-...|++++||+|++.++|.....+++...+.... ..+.||++.++.|+. +.+|+|.|+|..
T Consensus 22 ~~~F~P~~i~v~~G~tV~~~~~n~d~~~H~~~~~~~~~~-------------~~~~pg~~~~~~~t~-~~~G~Y~y~C~~ 87 (100)
T 4hci_A 22 DDYFNPNVITIPINESTTLLLKNKGKSEHTFTIKKLGID-------------VVVESGKEKNITVKP-KSAGTYELICRY 87 (100)
T ss_dssp TTEEESSEEEECTTSCEEEEEEECSSSCEEEEEGGGTEE-------------EEECTTCEEEEEECC-CSCEEEEEECTT
T ss_pred CCEEeCCEEEECCCCEEEEEEEcCCCceEEEEEecCCcc-------------eeecCCcceeEEEec-ccCceEEEECcc
Confidence 445533689999999999999999877777766554322 247899999999997 899999999974
Q ss_pred hhhhccceeeEEEc
Q 008799 128 SWLRATVHGAIVIL 141 (553)
Q Consensus 128 ~~~~~Gl~G~liV~ 141 (553)
|. ..||.|.|+|+
T Consensus 88 H~-~~gM~G~i~Ve 100 (100)
T 4hci_A 88 HL-LKGMEGKVIVK 100 (100)
T ss_dssp TG-GGTCEEEEEEC
T ss_pred cc-CCCCEEEEEEC
Confidence 32 26999999996
No 83
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A
Probab=98.64 E-value=8.2e-08 Score=84.06 Aligned_cols=98 Identities=19% Similarity=0.180 Sum_probs=70.3
Q ss_pred EEEecCCCEEEEEEEcCCCCCCCCCCeeecCC--ceEEEe-eC--CC---CCCCCCCCCCCCCCCCCcceeeEecCCcEE
Q 008799 430 LYRLAYNSTVQLVLQGTTVIAPENHPTHLHGF--NFFAVG-KG--SG---NFDPNKDPQKFNLVDPVERNTISVPTAGWT 501 (553)
Q Consensus 430 ~~~~~~g~~v~~~i~n~~~~~~~~HP~HlHG~--~f~Vl~-~g--~g---~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~ 501 (553)
.++++.|++|+|++.|.+. +.+.|.||++.. .+.-.. .+ .+ .|-+.. -....+++|..|.++...
T Consensus 34 ~i~v~~G~tV~~~~~N~~~-~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~t~~l~pG~~~ 106 (140)
T 1qhq_A 34 SLSLPANTVVRLDFVNQNN-LGVQHNWVLVNGGDDVAAAVNTAAQNNADALFVPPP------DTPNALAWTAMLNAGESG 106 (140)
T ss_dssp EEEEETTCEEEEEEEECCS-SCCCBCCEEESSSHHHHHHHHHHHHTCGGGTTCCCT------TCTTEEEECCCBCTTEEE
T ss_pred eEEECCCCEEEEEEECCCC-CCCceeEEEeccCcchhhhhhhhhhhcccccccCcc------ccccccccceeeCCCcee
Confidence 4688999999999999321 357899999843 121000 00 00 011100 011347889999999999
Q ss_pred EEEEEecCceeeEEeecchhhHhccceEEEEEe
Q 008799 502 AIRFRADNPGVWFLHCHLEVHTSWGLKMAFVVD 534 (553)
Q Consensus 502 ~irf~adnpG~w~~HCHil~H~d~GM~~~~~V~ 534 (553)
.+.|.++.||.|.|||++..|...||...+.|.
T Consensus 107 ~~~~~~~~~G~y~f~C~~~~H~~~GM~g~i~V~ 139 (140)
T 1qhq_A 107 SVTFRTPAPGTYLYICTFPGHYLAGMKGTLTVT 139 (140)
T ss_dssp EEEEECCSSEEEEEECCSTTTTTTTCEEEEEEE
T ss_pred EEEEEeCCCeeEEEEeCCcCHhhcCCEEEEEEc
Confidence 999999999999999999999999999999986
No 84
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.60 E-value=1.2e-07 Score=81.84 Aligned_cols=79 Identities=13% Similarity=0.182 Sum_probs=57.1
Q ss_pred CCCCCCCeEeecCCCEEEEEEEeCCCCCceeeeCCCcccCCCCCCCCCCccCCCCCCCCceEEEEEeCCCCcceEEecCh
Q 008799 48 NGKFPGPTLHAREDDNVIVRVTNHVKYNVTIHWHGVRQLRTGWYDGPAYITQCPIQPGQSYVYNFTLTGQRGTLLWHAHI 127 (553)
Q Consensus 48 NG~~pGP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~pG~~~~y~~~~~~~~Gt~wYH~H~ 127 (553)
+..|-.+.|++++||+|++ .|....++++++.... +|........+.||++++|.| +.+|+|+|||-.
T Consensus 54 ~~~F~P~~i~V~~GdtV~~--~N~d~~~H~v~~~~~~-------~g~~~~~s~~l~pG~t~~~tF---~~~G~y~y~C~~ 121 (132)
T 3c75_A 54 KMKYLTPEVTIKAGETVYW--VNGEVMPHNVAFKKGI-------VGEDAFRGEMMTKDQAYAITF---NEAGSYDYFCTP 121 (132)
T ss_dssp TTEESSSEEEECTTCEEEE--EECSSSCBCCEECTTT-------SSSSCEECCCBCTTEEEEEEE---CSCEEEEEECSS
T ss_pred eeEEeCCEEEECCCCEEEE--EECCCCceEEEEeCCC-------CCcccccccccCCCCEEEEEc---CCCEEEEEEeCC
Confidence 4455447999999999765 5888777777765322 121122223588999999888 478999999976
Q ss_pred hhhhccceeeEEEc
Q 008799 128 SWLRATVHGAIVIL 141 (553)
Q Consensus 128 ~~~~~Gl~G~liV~ 141 (553)
|. ||.|.|+|+
T Consensus 122 H~---gM~G~I~V~ 132 (132)
T 3c75_A 122 HP---FMRGKVIVE 132 (132)
T ss_dssp CT---TCEEEEEEC
T ss_pred Cc---CCEEEEEEC
Confidence 54 999999985
No 85
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1
Probab=98.58 E-value=1.1e-07 Score=77.57 Aligned_cols=79 Identities=16% Similarity=0.214 Sum_probs=57.6
Q ss_pred CeEeecCCCEEEEEEEeCCCCCceeeeCCCcccCCCCCCC--CCCccCCCCCCCCceEEEEEeCCCCcceEEecChhhhh
Q 008799 54 PTLHAREDDNVIVRVTNHVKYNVTIHWHGVRQLRTGWYDG--PAYITQCPIQPGQSYVYNFTLTGQRGTLLWHAHISWLR 131 (553)
Q Consensus 54 P~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DG--v~~~tq~~i~pG~~~~y~~~~~~~~Gt~wYH~H~~~~~ 131 (553)
+.|++++||+|+ ++|....++++|+|+...+.. .|. .+ .....+.||+++++.|. .+|+|+|||+.| ..
T Consensus 18 ~~i~v~~G~~V~--~~n~~~~~H~~~~~~~~~p~~--~~~~~~~-~~~~~~~pG~~~~~tf~---~~G~y~y~C~~H-~~ 88 (98)
T 2plt_A 18 KTLTIKSGETVN--FVNNAGFPHNIVFDEDAIPSG--VNADAIS-RDDYLNAPGETYSVKLT---AAGEYGYYCEPH-QG 88 (98)
T ss_dssp SEEEECTTCEEE--EEECSSCCEEEEECGGGSCTT--CCHHHHC-EEEEECSTTCEEEEECC---SCEEEEEECGGG-GG
T ss_pred CEEEECCCCEEE--EEECCCCceEEEEeCCCCCCc--ccccccc-ccceecCCCCEEEEEeC---CCeEEEEEcCCc-cc
Confidence 799999999875 589887899999998643211 111 00 01135889999999873 799999999933 33
Q ss_pred ccceeeEEEc
Q 008799 132 ATVHGAIVIL 141 (553)
Q Consensus 132 ~Gl~G~liV~ 141 (553)
+||.|.|+|+
T Consensus 89 ~gM~G~i~V~ 98 (98)
T 2plt_A 89 AGMVGKIIVQ 98 (98)
T ss_dssp GTCEEEEEEC
T ss_pred cCCeEEEEEC
Confidence 6999999984
No 86
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1
Probab=98.52 E-value=2.6e-07 Score=75.36 Aligned_cols=80 Identities=15% Similarity=0.221 Sum_probs=59.0
Q ss_pred EEEecCCCEEEEEEEcCCCCCCCCCCeeecCCceEEEeeCCCCCCCCCCCCCCCCCCCCcceeeEecCCcEEEEEEEecC
Q 008799 430 LYRLAYNSTVQLVLQGTTVIAPENHPTHLHGFNFFAVGKGSGNFDPNKDPQKFNLVDPVERNTISVPTAGWTAIRFRADN 509 (553)
Q Consensus 430 ~~~~~~g~~v~~~i~n~~~~~~~~HP~HlHG~~f~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~adn 509 (553)
.+.++.|++|+| .|.+ ...|.+|+|+..+ +. ..+. ...++|+..+.+|+...++| +.
T Consensus 19 ~i~v~~G~~V~~--~n~~---~~~H~~~~~~~~~-----------p~----~~~~-~~~~~~~~~~~pG~~~~~tf--~~ 75 (98)
T 2plt_A 19 TLTIKSGETVNF--VNNA---GFPHNIVFDEDAI-----------PS----GVNA-DAISRDDYLNAPGETYSVKL--TA 75 (98)
T ss_dssp EEEECTTCEEEE--EECS---SCCEEEEECGGGS-----------CT----TCCH-HHHCEEEEECSTTCEEEEEC--CS
T ss_pred EEEECCCCEEEE--EECC---CCceEEEEeCCCC-----------CC----cccc-ccccccceecCCCCEEEEEe--CC
Confidence 468899999998 4533 4689999987422 00 0000 01246889999999888866 58
Q ss_pred ceeeEEeecchhhHhccceEEEEEe
Q 008799 510 PGVWFLHCHLEVHTSWGLKMAFVVD 534 (553)
Q Consensus 510 pG~w~~HCHil~H~d~GM~~~~~V~ 534 (553)
||.|.|||| .|.+.||...+.|+
T Consensus 76 ~G~y~y~C~--~H~~~gM~G~i~V~ 98 (98)
T 2plt_A 76 AGEYGYYCE--PHQGAGMVGKIIVQ 98 (98)
T ss_dssp CEEEEEECG--GGGGGTCEEEEEEC
T ss_pred CeEEEEEcC--CccccCCeEEEEEC
Confidence 999999999 79999999999884
No 87
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A
Probab=98.51 E-value=2e-07 Score=76.15 Aligned_cols=80 Identities=15% Similarity=0.133 Sum_probs=56.1
Q ss_pred CeEeecCCCEEEEEEEeCCCCCceeeeCCCcccCCCCCCCCCCccCCCCCCCCceEEEEEeCCCCcceEEecChhhhhcc
Q 008799 54 PTLHAREDDNVIVRVTNHVKYNVTIHWHGVRQLRTGWYDGPAYITQCPIQPGQSYVYNFTLTGQRGTLLWHAHISWLRAT 133 (553)
Q Consensus 54 P~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~pG~~~~y~~~~~~~~Gt~wYH~H~~~~~~G 133 (553)
+.|++++||+|++ .|....+++++.++...++.. .++.. .....+.||+++++.| +.+|+|+|||+.| ..+|
T Consensus 19 ~~i~v~~G~~V~~--~n~~~~~H~~~~~~~~~pg~~-~~~~~-~~~~~~~pG~~~~~tf---~~~G~y~~~C~~H-~~~g 90 (98)
T 1pcs_A 19 STVTIKAGEEVKW--VNNKLSPHNIVFDADGVPADT-AAKLS-HKGLLFAAGESFTSTF---TEPGTYTYYCEPH-RGAG 90 (98)
T ss_dssp SEEEECTTCEEEE--EECSSCCEEEEECCSSSCHHH-HHHHC-EEEEECSTTCEEEEEC---CSCEEEEEECGGG-TTTT
T ss_pred CEEEECCCCEEEE--EECCCCCcEEEEeCCCCCccc-ccccc-ccccccCCCCEEEEEc---CCCeEEEEEcCCc-cccC
Confidence 6899999998765 588777899998875422000 00000 0123589999999887 4799999999932 3379
Q ss_pred ceeeEEEc
Q 008799 134 VHGAIVIL 141 (553)
Q Consensus 134 l~G~liV~ 141 (553)
|.|.|+|+
T Consensus 91 M~G~i~V~ 98 (98)
T 1pcs_A 91 MVGKVVVE 98 (98)
T ss_dssp CEEEEEEC
T ss_pred CeEEEEEC
Confidence 99999985
No 88
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A
Probab=98.49 E-value=4.3e-07 Score=74.07 Aligned_cols=78 Identities=14% Similarity=0.175 Sum_probs=58.4
Q ss_pred EEEecCCCEEEEEEEcCCCCCCCCCCeeecCCceEEEeeCCCCCCCCCCCCCCCCCCCCc-ceeeEecCCcEEEEEEEec
Q 008799 430 LYRLAYNSTVQLVLQGTTVIAPENHPTHLHGFNFFAVGKGSGNFDPNKDPQKFNLVDPVE-RNTISVPTAGWTAIRFRAD 508 (553)
Q Consensus 430 ~~~~~~g~~v~~~i~n~~~~~~~~HP~HlHG~~f~Vl~~g~g~~~~~~~~~~~~~~~p~~-rDTv~vp~~g~~~irf~ad 508 (553)
.+.++.|++|.|+ |.+ ...|.+|+++..+- +. ..+.+ +|+..+.+|+...++| +
T Consensus 20 ~i~v~~G~~V~~~--n~~---~~~H~~~~~~~~~p--g~----------------~~~~~~~~~~~~~pG~~~~~tf--~ 74 (98)
T 1pcs_A 20 TVTIKAGEEVKWV--NNK---LSPHNIVFDADGVP--AD----------------TAAKLSHKGLLFAAGESFTSTF--T 74 (98)
T ss_dssp EEEECTTCEEEEE--ECS---SCCEEEEECCSSSC--HH----------------HHHHHCEEEEECSTTCEEEEEC--C
T ss_pred EEEECCCCEEEEE--ECC---CCCcEEEEeCCCCC--cc----------------ccccccccccccCCCCEEEEEc--C
Confidence 4688999999987 432 46799999864221 00 00111 5788899999888776 7
Q ss_pred CceeeEEeecchhhHhccceEEEEEe
Q 008799 509 NPGVWFLHCHLEVHTSWGLKMAFVVD 534 (553)
Q Consensus 509 npG~w~~HCHil~H~d~GM~~~~~V~ 534 (553)
.||.|.|||| .|.+.||...+.|+
T Consensus 75 ~~G~y~~~C~--~H~~~gM~G~i~V~ 98 (98)
T 1pcs_A 75 EPGTYTYYCE--PHRGAGMVGKVVVE 98 (98)
T ss_dssp SCEEEEEECG--GGTTTTCEEEEEEC
T ss_pred CCeEEEEEcC--CccccCCeEEEEEC
Confidence 9999999999 79999999999884
No 89
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A
Probab=98.46 E-value=3.4e-07 Score=73.53 Aligned_cols=73 Identities=19% Similarity=0.259 Sum_probs=54.6
Q ss_pred CeEeecCCCEEEEEEEeCCCCCceeeeCCCcccCCCCCCCCCCccCCCCCCCCceEEEEEeCCCCcceEEecChhhhhcc
Q 008799 54 PTLHAREDDNVIVRVTNHVKYNVTIHWHGVRQLRTGWYDGPAYITQCPIQPGQSYVYNFTLTGQRGTLLWHAHISWLRAT 133 (553)
Q Consensus 54 P~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~pG~~~~y~~~~~~~~Gt~wYH~H~~~~~~G 133 (553)
+.|++++||+|++ .|....+++++.++... +. .....+.||+++++.| +.+|+|||||+.| ..+|
T Consensus 19 ~~i~v~~Gd~V~~--~n~~~~~H~v~~~~~~~----~~-----~~~~~~~~g~~~~~~f---~~~G~y~~~C~~H-~~~g 83 (91)
T 1bxv_A 19 STIEIQAGDTVQW--VNNKLAPHNVVVEGQPE----LS-----HKDLAFSPGETFEATF---SEPGTYTYYCEPH-RGAG 83 (91)
T ss_dssp SEEEECTTCEEEE--EECSSCCEEEEETTCGG----GC-----EEEEECSTTCEEEEEC---CSCEEEEEECTTT-GGGT
T ss_pred CEEEECCCCEEEE--EECCCCCcEEEEeCCCc----cC-----cccceeCCCCEEEEEe---CCCEEEEEEeCCC-ccCC
Confidence 7999999999765 58777788998887311 00 1113588999988877 5799999999943 2359
Q ss_pred ceeeEEEc
Q 008799 134 VHGAIVIL 141 (553)
Q Consensus 134 l~G~liV~ 141 (553)
|.|.|+|+
T Consensus 84 M~g~i~V~ 91 (91)
T 1bxv_A 84 MVGKIVVQ 91 (91)
T ss_dssp CEEEEEEC
T ss_pred CEEEEEEC
Confidence 99999984
No 90
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A*
Probab=98.45 E-value=5.3e-07 Score=73.41 Aligned_cols=77 Identities=19% Similarity=0.213 Sum_probs=54.8
Q ss_pred CeEeecCCCEEEEEEEeCCCCCceeeeCCCcccCCCCCCCCCC--ccCCCCCCCCceEEEEEeCCCCcceEEecChhhhh
Q 008799 54 PTLHAREDDNVIVRVTNHVKYNVTIHWHGVRQLRTGWYDGPAY--ITQCPIQPGQSYVYNFTLTGQRGTLLWHAHISWLR 131 (553)
Q Consensus 54 P~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~--~tq~~i~pG~~~~y~~~~~~~~Gt~wYH~H~~~~~ 131 (553)
+.|++++||+| ++.|....+++++.++.... +|... .....+.||+++++.| +.+|+|+|||+.| ..
T Consensus 19 ~~i~v~~G~~V--~~~n~~~~~H~~~~~~~~~~-----~~~~~~~~~~~~~~~g~~~~~tf---~~~G~y~y~C~~H-~~ 87 (97)
T 1b3i_A 19 KALSISAGDTV--EFVMNKVGPHNVIFDKVPAG-----ESAPALSNTKLAIAPGSFYSVTL---GTPGTYSFYCTPH-RG 87 (97)
T ss_dssp SEEEECTTCEE--EEEECSSCCCCBEEEECCTT-----SCHHHHCBCCCCCSCSCCEEEEC---CSCSEEEEECSST-TT
T ss_pred CEEEECCCCEE--EEEECCCCCeEEEEeCCCCc-----cccccccccceecCCCCEEEEEe---CCCeEEEEEccCh-hh
Confidence 68999999986 55687666777777764421 11100 0113588999999887 5799999999933 23
Q ss_pred ccceeeEEEc
Q 008799 132 ATVHGAIVIL 141 (553)
Q Consensus 132 ~Gl~G~liV~ 141 (553)
+||.|.|+|+
T Consensus 88 ~gM~G~i~V~ 97 (97)
T 1b3i_A 88 AGMVGTITVE 97 (97)
T ss_dssp TTCEEEEEEC
T ss_pred cCCEEEEEEC
Confidence 6999999984
No 91
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A
Probab=98.44 E-value=5.6e-07 Score=72.23 Aligned_cols=72 Identities=19% Similarity=0.303 Sum_probs=56.4
Q ss_pred EEEecCCCEEEEEEEcCCCCCCCCCCeeecCCceEEEeeCCCCCCCCCCCCCCCCCCCCcceeeEecCCcEEEEEEEecC
Q 008799 430 LYRLAYNSTVQLVLQGTTVIAPENHPTHLHGFNFFAVGKGSGNFDPNKDPQKFNLVDPVERNTISVPTAGWTAIRFRADN 509 (553)
Q Consensus 430 ~~~~~~g~~v~~~i~n~~~~~~~~HP~HlHG~~f~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~adn 509 (553)
.+.++.|++|.|+ |.+ ...|.+|+++.. +...++..+.+|+...+.| +.
T Consensus 20 ~i~v~~Gd~V~~~--n~~---~~~H~v~~~~~~------------------------~~~~~~~~~~~g~~~~~~f--~~ 68 (91)
T 1bxv_A 20 TIEIQAGDTVQWV--NNK---LAPHNVVVEGQP------------------------ELSHKDLAFSPGETFEATF--SE 68 (91)
T ss_dssp EEEECTTCEEEEE--ECS---SCCEEEEETTCG------------------------GGCEEEEECSTTCEEEEEC--CS
T ss_pred EEEECCCCEEEEE--ECC---CCCcEEEEeCCC------------------------ccCcccceeCCCCEEEEEe--CC
Confidence 4688999999986 432 457999988720 0124677889998877766 89
Q ss_pred ceeeEEeecchhhHhccceEEEEEe
Q 008799 510 PGVWFLHCHLEVHTSWGLKMAFVVD 534 (553)
Q Consensus 510 pG~w~~HCHil~H~d~GM~~~~~V~ 534 (553)
||.|.|||| .|...||.+.+.|+
T Consensus 69 ~G~y~~~C~--~H~~~gM~g~i~V~ 91 (91)
T 1bxv_A 69 PGTYTYYCE--PHRGAGMVGKIVVQ 91 (91)
T ss_dssp CEEEEEECT--TTGGGTCEEEEEEC
T ss_pred CEEEEEEeC--CCccCCCEEEEEEC
Confidence 999999999 89999999999874
No 92
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A
Probab=98.42 E-value=5.6e-07 Score=74.01 Aligned_cols=82 Identities=11% Similarity=0.039 Sum_probs=54.3
Q ss_pred CeEeecCCCEEEEEEEeCCCCCceeeeCCCcccCC--CCCCCCCCc--cCCCCCCCCceEEEEEeCCCCcceEEecChhh
Q 008799 54 PTLHAREDDNVIVRVTNHVKYNVTIHWHGVRQLRT--GWYDGPAYI--TQCPIQPGQSYVYNFTLTGQRGTLLWHAHISW 129 (553)
Q Consensus 54 P~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~--~~~DGv~~~--tq~~i~pG~~~~y~~~~~~~~Gt~wYH~H~~~ 129 (553)
+.|++++||+|+ +.|....+++++.+.-..... ..++..+++ ....+.||+++++.| +.+|+|+|||+ ..
T Consensus 17 ~~i~v~~G~tV~--~~n~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~~tf---~~~G~y~y~C~-~H 90 (102)
T 1kdj_A 17 DSITVSAGEAVE--FTLVGETGHNIVFDIPAGAPGTVASELKAASMDENDLLSEDEPSFKAKV---STPGTYTFYCT-PH 90 (102)
T ss_dssp SEEEECTTCCEE--EEECSSSCBCCEECCCTTCCHHHHHHHHHTSCCTTCCBBTTBCEEEECC---CSCEEEEEECS-TT
T ss_pred CEEEECCCCEEE--EEECCCCCeEEEEeCcccccccccchhhcccccccceecCCCCEEEEEe---CCCeEEEEEeC-CC
Confidence 789999999976 558876778877762110000 000000111 123589999998877 57999999999 22
Q ss_pred hhccceeeEEEc
Q 008799 130 LRATVHGAIVIL 141 (553)
Q Consensus 130 ~~~Gl~G~liV~ 141 (553)
..+||.|.|+|+
T Consensus 91 ~~~gM~G~i~V~ 102 (102)
T 1kdj_A 91 KSANMKGTLTVK 102 (102)
T ss_dssp GGGTCEEEEEEC
T ss_pred cccCCeEEEEEC
Confidence 337999999985
No 93
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=98.42 E-value=8.3e-07 Score=74.33 Aligned_cols=74 Identities=19% Similarity=0.322 Sum_probs=57.6
Q ss_pred EEEecCCCEEEEEEEcCCCCCCCCCCeeecCCceEEEeeCCCCCCCCCCCCCCCCCCCCcceeeEecCCcEEEEEEEecC
Q 008799 430 LYRLAYNSTVQLVLQGTTVIAPENHPTHLHGFNFFAVGKGSGNFDPNKDPQKFNLVDPVERNTISVPTAGWTAIRFRADN 509 (553)
Q Consensus 430 ~~~~~~g~~v~~~i~n~~~~~~~~HP~HlHG~~f~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~adn 509 (553)
.+.++.|+.|+|.+.|.. ...|-|++... + -+..++||+...+.|.++.
T Consensus 39 ~i~v~~G~~V~~~~~n~d---~~~H~~~i~~~-------~---------------------~~~~i~pG~~~~~~f~~~~ 87 (112)
T 1iby_A 39 TLVVKKGDAVKVVVENKS---PISEGFSIDAF-------G---------------------VQEVIKAGETKTISFTADK 87 (112)
T ss_dssp EEEEETTCEEEEEEEECS---SSCEEEEEGGG-------T---------------------EEEEECTTCEEEEEEECCS
T ss_pred EEEEeCCCEEEEEEEECC---CCeEEEEEcCC-------C---------------------ceeEeCCCCEEEEEEECCC
Confidence 478899999999999954 23444443321 1 1567899999999999999
Q ss_pred ceeeEEeecchhhHhccceEEEEEeC
Q 008799 510 PGVWFLHCHLEVHTSWGLKMAFVVDN 535 (553)
Q Consensus 510 pG~w~~HCHil~H~d~GM~~~~~V~~ 535 (553)
||.|.||||+..|... |.+.+.|++
T Consensus 88 ~G~y~~~C~~~~~~~~-M~g~i~V~~ 112 (112)
T 1iby_A 88 AGAFTIWCQLHPKNIH-LPGTLNVVE 112 (112)
T ss_dssp CEEEEEBCSSSCTTTB-CCEEEEEEC
T ss_pred CEEEEEECCCCCchHH-CEEEEEEeC
Confidence 9999999999887654 999998863
No 94
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti}
Probab=98.40 E-value=6.2e-07 Score=76.50 Aligned_cols=76 Identities=12% Similarity=0.126 Sum_probs=52.5
Q ss_pred CeEeecCCCEEEEEEEeCCCCCceeeeCCCcccCCCCCCCCCCccCCCCCCCCceEEEEEeCCCCcceEEecChhhhhcc
Q 008799 54 PTLHAREDDNVIVRVTNHVKYNVTIHWHGVRQLRTGWYDGPAYITQCPIQPGQSYVYNFTLTGQRGTLLWHAHISWLRAT 133 (553)
Q Consensus 54 P~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~pG~~~~y~~~~~~~~Gt~wYH~H~~~~~~G 133 (553)
+.|++++||+|++.+.|. ++++..+... +-||.. ...+.||++++|.| +.+|+|||||..| ..+|
T Consensus 23 ~~i~V~~GDtVtf~n~~~---~H~v~~~~~~-----~P~g~~---~f~s~pGet~s~TF---~~pG~y~y~C~~H-~~~G 87 (127)
T 3tu6_A 23 AVIRAQPGDTVTFVAKDK---GHNSALMKGG-----APEGAE---TWKGKINEEITVTL---SKPGVYMYQCAPH-VGMG 87 (127)
T ss_dssp SEEEECTTCEEEEECSSS---SCCCEECTTC-----SCTTCC---CCBCCTTCCCEEEC---CSCEEEEEECTTT-GGGT
T ss_pred CEEEECCCCEEEEEECCC---CceEEEccCc-----CCCCcc---ceecCCCCEEEEEe---CCCeEEEEEeCCC-CcCC
Confidence 799999999977665553 4444333211 112321 13457999998888 5799999999854 3479
Q ss_pred ceeeEEEcCCC
Q 008799 134 VHGAIVILPKR 144 (553)
Q Consensus 134 l~G~liV~~~~ 144 (553)
|.|.|+|.++.
T Consensus 88 M~G~I~V~~~~ 98 (127)
T 3tu6_A 88 MIGAIVVGEPA 98 (127)
T ss_dssp CEEEEEESSCT
T ss_pred cEEEEEECcCC
Confidence 99999999764
No 95
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A
Probab=98.39 E-value=9.1e-07 Score=75.05 Aligned_cols=75 Identities=11% Similarity=0.029 Sum_probs=52.0
Q ss_pred CeEeecCCCEEEEEEEeCCCCCceeeeCCCcccCCCCCCCCCCccCCCCCCCCceEEEEEeCCCCcceEEecChhhhhcc
Q 008799 54 PTLHAREDDNVIVRVTNHVKYNVTIHWHGVRQLRTGWYDGPAYITQCPIQPGQSYVYNFTLTGQRGTLLWHAHISWLRAT 133 (553)
Q Consensus 54 P~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~pG~~~~y~~~~~~~~Gt~wYH~H~~~~~~G 133 (553)
..|++++||+|++.+.| .++++..+.. .+-+|.- ...+.||++++|.| +.+|+|||+|-.| ..+|
T Consensus 21 ~~i~V~~GdtV~f~~~~---~~H~v~~~~~-----~~P~g~~---~f~~~pg~t~s~TF---~~pG~y~y~C~~H-~~~G 85 (123)
T 3erx_A 21 AFVRAEPGDVINFVPTD---KSHNVEAIKE-----ILPEGVE---SFKSKINESYTLTV---TEPGLYGVKCTPH-FGMG 85 (123)
T ss_dssp SEEEECTTEEEEEEESS---TTCCCEECTT-----SSCTTCC---CCBCCTTCCEEEEE---CSCEEEEEECGGG-TTTT
T ss_pred CEEEECCCCEEEEEECC---CCceEEEcCC-----cCCCCcc---ceecCCCCEEEEEe---CCCeEEEEEeCCC-CcCC
Confidence 69999999998777766 2344333321 1123321 13457999998888 4799999999843 2379
Q ss_pred ceeeEEEcCC
Q 008799 134 VHGAIVILPK 143 (553)
Q Consensus 134 l~G~liV~~~ 143 (553)
|.|.|+|.++
T Consensus 86 M~G~I~V~~~ 95 (123)
T 3erx_A 86 MVGLVQVGDA 95 (123)
T ss_dssp CEEEEEESSS
T ss_pred cEEEEEECCC
Confidence 9999999864
No 96
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A*
Probab=98.36 E-value=7.4e-07 Score=72.51 Aligned_cols=78 Identities=14% Similarity=0.321 Sum_probs=57.5
Q ss_pred EEEecCCCEEEEEEEcCCCCCCCCCCeeecCCceEEEeeCCCCCCCCCCCCCCCCCCCCcceeeEecCCcEEEEEEEecC
Q 008799 430 LYRLAYNSTVQLVLQGTTVIAPENHPTHLHGFNFFAVGKGSGNFDPNKDPQKFNLVDPVERNTISVPTAGWTAIRFRADN 509 (553)
Q Consensus 430 ~~~~~~g~~v~~~i~n~~~~~~~~HP~HlHG~~f~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~adn 509 (553)
.+.++.|++|.|+ |.+ ...|.+++++..+ ..+ . ....+++..+.+|+...+.| +.
T Consensus 20 ~i~v~~G~~V~~~--n~~---~~~H~~~~~~~~~-----~~~-------~------~~~~~~~~~~~~g~~~~~tf--~~ 74 (97)
T 1b3i_A 20 ALSISAGDTVEFV--MNK---VGPHNVIFDKVPA-----GES-------A------PALSNTKLAIAPGSFYSVTL--GT 74 (97)
T ss_dssp EEEECTTCEEEEE--ECS---SCCCCBEEEECCT-----TSC-------H------HHHCBCCCCCSCSCCEEEEC--CS
T ss_pred EEEECCCCEEEEE--ECC---CCCeEEEEeCCCC-----ccc-------c------ccccccceecCCCCEEEEEe--CC
Confidence 3688999999887 532 4679999886543 000 0 00114677888888877766 89
Q ss_pred ceeeEEeecchhhHhccceEEEEEe
Q 008799 510 PGVWFLHCHLEVHTSWGLKMAFVVD 534 (553)
Q Consensus 510 pG~w~~HCHil~H~d~GM~~~~~V~ 534 (553)
||.|.|||+ .|.++||...+.|+
T Consensus 75 ~G~y~y~C~--~H~~~gM~G~i~V~ 97 (97)
T 1b3i_A 75 PGTYSFYCT--PHRGAGMVGTITVE 97 (97)
T ss_dssp CSEEEEECS--STTTTTCEEEEEEC
T ss_pred CeEEEEEcc--ChhhcCCEEEEEEC
Confidence 999999999 89999999999884
No 97
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=98.35 E-value=1.5e-06 Score=71.09 Aligned_cols=72 Identities=17% Similarity=0.334 Sum_probs=57.6
Q ss_pred EEEecCCCEEEEEEEcCCCCCCCCCCeeecCCceEEEeeCCCCCCCCCCCCCCCCCCCCcceeeEecCCcEEEEEEEecC
Q 008799 430 LYRLAYNSTVQLVLQGTTVIAPENHPTHLHGFNFFAVGKGSGNFDPNKDPQKFNLVDPVERNTISVPTAGWTAIRFRADN 509 (553)
Q Consensus 430 ~~~~~~g~~v~~~i~n~~~~~~~~HP~HlHG~~f~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~adn 509 (553)
.+.++.|+.|.|++.|.+ ...|.|.+.+..+ ...+.||....+.|+++.
T Consensus 29 ~i~v~~G~tV~~~~~n~d---~~~H~~~~~~~~~----------------------------~~~~~pg~~~~~~~t~~~ 77 (100)
T 4hci_A 29 VITIPINESTTLLLKNKG---KSEHTFTIKKLGI----------------------------DVVVESGKEKNITVKPKS 77 (100)
T ss_dssp EEEECTTSCEEEEEEECS---SSCEEEEEGGGTE----------------------------EEEECTTCEEEEEECCCS
T ss_pred EEEECCCCEEEEEEEcCC---CceEEEEEecCCc----------------------------ceeecCCcceeEEEeccc
Confidence 478899999999999854 3456665544322 235778888999999999
Q ss_pred ceeeEEeecchhhHhccceEEEEEe
Q 008799 510 PGVWFLHCHLEVHTSWGLKMAFVVD 534 (553)
Q Consensus 510 pG~w~~HCHil~H~d~GM~~~~~V~ 534 (553)
||.|.|+|. .|...||.+.+.|+
T Consensus 78 ~G~Y~y~C~--~H~~~gM~G~i~Ve 100 (100)
T 4hci_A 78 AGTYELICR--YHLLKGMEGKVIVK 100 (100)
T ss_dssp CEEEEEECT--TTGGGTCEEEEEEC
T ss_pred CceEEEECc--cccCCCCEEEEEEC
Confidence 999999997 69999999999885
No 98
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A
Probab=98.34 E-value=1.7e-06 Score=70.70 Aligned_cols=77 Identities=9% Similarity=0.164 Sum_probs=55.0
Q ss_pred CeEeecCCCEEEEEEEeCCCCCceeeeCCCcccCCCCCCCCC------CccCCCCCCCCceEEEEEeCCCCcceEEecCh
Q 008799 54 PTLHAREDDNVIVRVTNHVKYNVTIHWHGVRQLRTGWYDGPA------YITQCPIQPGQSYVYNFTLTGQRGTLLWHAHI 127 (553)
Q Consensus 54 P~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~------~~tq~~i~pG~~~~y~~~~~~~~Gt~wYH~H~ 127 (553)
+.|++++||+|+ ++|....+++++.++...+ +|.. ......+.||+++++.| +.+|+|+|||+.
T Consensus 17 ~~i~v~~G~tV~--~~n~~~~~H~v~~~~~~~p-----~~~~~~~~~~~~~~~~~~~G~~~~~tf---~~~G~y~~~C~~ 86 (99)
T 1plc_A 17 SEFSISPGEKIV--FKNNAGFPHNIVFDEDSIP-----SGVDASKISMSEEDLLNAKGETFEVAL---SNKGEYSFYCSP 86 (99)
T ss_dssp SEEEECTTCEEE--EEECSSCCBCCEECTTSSC-----TTCCHHHHCCCTTCCBCSTTCEEEEEC---CSCEEEEEECGG
T ss_pred CEEEECCCCEEE--EEECCCCceEEEEeCCCCc-----ccccccccccccCccccCCCCEEEEEE---CCCceEEEEcCC
Confidence 699999999865 5888777888887764321 1110 01113578999998877 379999999993
Q ss_pred hhhhccceeeEEEc
Q 008799 128 SWLRATVHGAIVIL 141 (553)
Q Consensus 128 ~~~~~Gl~G~liV~ 141 (553)
| ..+||.|.|+|+
T Consensus 87 H-~~~gM~G~i~V~ 99 (99)
T 1plc_A 87 H-QGAGMVGKVTVN 99 (99)
T ss_dssp G-TTTTCEEEEEEC
T ss_pred C-cccCCEEEEEEC
Confidence 2 236999999984
No 99
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A
Probab=98.33 E-value=2.1e-06 Score=70.02 Aligned_cols=77 Identities=13% Similarity=0.183 Sum_probs=55.6
Q ss_pred CeEeecCCCEEEEEEEeCCCCCceeeeCCCcccCCCCCCCCC------CccCCCCCCCCceEEEEEeCCCCcceEEecCh
Q 008799 54 PTLHAREDDNVIVRVTNHVKYNVTIHWHGVRQLRTGWYDGPA------YITQCPIQPGQSYVYNFTLTGQRGTLLWHAHI 127 (553)
Q Consensus 54 P~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~------~~tq~~i~pG~~~~y~~~~~~~~Gt~wYH~H~ 127 (553)
+.|++++||+| +++|....+++++.++...+ +|.. ......+.||+++++.| +.+|+|+|||+.
T Consensus 17 ~~i~v~~G~tV--~~~n~~~~~H~~~~~~~~~p-----~g~~~~~~~~~~~~~~~~~G~~~~~~f---~~~G~y~~~C~~ 86 (99)
T 1byp_A 17 SDLSIASGEKI--TFKNNAGFPHNDLFDKKEVP-----AGVDVTKISMPEEDLLNAPGEEYSVTL---TEKGTYKFYCAP 86 (99)
T ss_dssp SEEEECTTEEE--EEEECSSCCBCCEECTTSSC-----TTCCHHHHSCCTTCCBCSTTCEEEEEE---CSCEEEEEECGG
T ss_pred CEEEECCCCEE--EEEECCCCcceEEEeCCCCc-----cccccccccccccceeeCCCCEEEEEe---CCCcEEEEEcCC
Confidence 68999999985 55898877888888864321 2210 01113578999998877 379999999993
Q ss_pred hhhhccceeeEEEc
Q 008799 128 SWLRATVHGAIVIL 141 (553)
Q Consensus 128 ~~~~~Gl~G~liV~ 141 (553)
| ..+||.|.|+|+
T Consensus 87 H-~~~gM~G~i~V~ 99 (99)
T 1byp_A 87 H-AGAGMVGKVTVN 99 (99)
T ss_dssp G-TTTTCEEEEEEC
T ss_pred c-cccCCEEEEEEC
Confidence 2 336999999984
No 100
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A
Probab=98.33 E-value=8.1e-07 Score=72.59 Aligned_cols=82 Identities=11% Similarity=0.153 Sum_probs=57.9
Q ss_pred EEEecCCCEEEEEEEcCCCCCCCCCCeeecCCceEEEeeCCCCCCCCCCCCCCCCCCCCcceeeEecCCcEEEEEEEecC
Q 008799 430 LYRLAYNSTVQLVLQGTTVIAPENHPTHLHGFNFFAVGKGSGNFDPNKDPQKFNLVDPVERNTISVPTAGWTAIRFRADN 509 (553)
Q Consensus 430 ~~~~~~g~~v~~~i~n~~~~~~~~HP~HlHG~~f~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~adn 509 (553)
.+.++.|++|.| .|.+ ...|.+|+++..|- . + ++.. . ....+|++.+.+|+...+.| +.
T Consensus 18 ~i~v~~G~tV~~--~n~~---~~~H~~~~~~~~~p---~--g-~~~~------~--~~~~~~~~~~~~G~~~~~~f--~~ 76 (99)
T 1byp_A 18 DLSIASGEKITF--KNNA---GFPHNDLFDKKEVP---A--G-VDVT------K--ISMPEEDLLNAPGEEYSVTL--TE 76 (99)
T ss_dssp EEEECTTEEEEE--EECS---SCCBCCEECTTSSC---T--T-CCHH------H--HSCCTTCCBCSTTCEEEEEE--CS
T ss_pred EEEECCCCEEEE--EECC---CCcceEEEeCCCCc---c--c-cccc------c--ccccccceeeCCCCEEEEEe--CC
Confidence 468899999988 4533 46899999975430 0 0 0000 0 00125667888998887776 59
Q ss_pred ceeeEEeecchhhHhccceEEEEEe
Q 008799 510 PGVWFLHCHLEVHTSWGLKMAFVVD 534 (553)
Q Consensus 510 pG~w~~HCHil~H~d~GM~~~~~V~ 534 (553)
||.|.|||+ .|.+.||...+.|+
T Consensus 77 ~G~y~~~C~--~H~~~gM~G~i~V~ 99 (99)
T 1byp_A 77 KGTYKFYCA--PHAGAGMVGKVTVN 99 (99)
T ss_dssp CEEEEEECG--GGTTTTCEEEEEEC
T ss_pred CcEEEEEcC--CccccCCEEEEEEC
Confidence 999999999 79999999999874
No 101
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0
Probab=98.31 E-value=1.5e-06 Score=73.66 Aligned_cols=75 Identities=9% Similarity=-0.043 Sum_probs=52.3
Q ss_pred CeEeecCCCEEEEEEEeCCCCCceeeeCCCcccCCCCCCCCCCccCCCCCCCCceEEEEEeCCCCcceEEecChhhhhcc
Q 008799 54 PTLHAREDDNVIVRVTNHVKYNVTIHWHGVRQLRTGWYDGPAYITQCPIQPGQSYVYNFTLTGQRGTLLWHAHISWLRAT 133 (553)
Q Consensus 54 P~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~pG~~~~y~~~~~~~~Gt~wYH~H~~~~~~G 133 (553)
..|++++||+|+. +|.. .++++..+.... -+|.. ...+.||++++|.| +.+|+|+|||-.| ..+|
T Consensus 22 ~~i~V~~GDTV~f--~n~~-~~Hnv~~~~~~~-----p~g~~---~~~~~pg~t~s~TF---~~~G~y~Y~C~~H-~~~G 86 (124)
T 3ef4_A 22 GFVKVEAGDTVKF--VPTD-KSHNAESVREVW-----PEGVA---PVKGGFSKEVVFNA---EKEGLYVLKCAPH-YGMG 86 (124)
T ss_dssp SEEEECTTCEEEE--ECSS-SSCCCEECTTTS-----CTTSC---CCBCCTTCCEEEEC---CSSEEEEEECTTT-GGGT
T ss_pred CEEEECCCCEEEE--EECC-CCccEEEeCCcC-----CCCcc---ccccCCCCEEEEEe---CCCeEEEEEcCCC-CcCC
Confidence 6999999999654 4554 566666553211 12221 13467999999888 4789999999633 2369
Q ss_pred ceeeEEEcCC
Q 008799 134 VHGAIVILPK 143 (553)
Q Consensus 134 l~G~liV~~~ 143 (553)
|.|.|+|.++
T Consensus 87 M~G~I~V~~p 96 (124)
T 3ef4_A 87 MVVLVQVGKP 96 (124)
T ss_dssp CEEEEEESSC
T ss_pred CEEEEEECCC
Confidence 9999999875
No 102
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1
Probab=98.19 E-value=7.9e-06 Score=67.53 Aligned_cols=77 Identities=13% Similarity=0.204 Sum_probs=53.4
Q ss_pred CCCCCeEeecCCCEEEEEEEeCCCCCceeeeCCCcccCCCCCCCCCCccCCCCCCCCceEEEEEeCCCCcceEEecChhh
Q 008799 50 KFPGPTLHAREDDNVIVRVTNHVKYNVTIHWHGVRQLRTGWYDGPAYITQCPIQPGQSYVYNFTLTGQRGTLLWHAHISW 129 (553)
Q Consensus 50 ~~pGP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~pG~~~~y~~~~~~~~Gt~wYH~H~~~ 129 (553)
.|--+.|++++||+|++ .|.....+++....... |........+.||+++++.| +.+|+|+|+|-.|.
T Consensus 30 ~F~P~~i~V~~G~tV~~--~N~d~~~H~v~~~~~~~-------~~~~~~s~~l~~g~~~~~tf---~~~G~y~~~C~~H~ 97 (106)
T 1id2_A 30 KYLTPEVTIKAGETVYW--VNGEVMPHNVAFKKGIV-------GEDAFRGEMMTKDQAYAITF---NEAGSYDYFCTPHP 97 (106)
T ss_dssp EESSSEEEECTTCEEEE--EECSSSCBCCEECTTTS-------SSSCEECCCBCTTEEEEEEE---CSCEEEEEECSSCT
T ss_pred EEeCCEEEECCCCEEEE--EECCCCcEEEEEeCCCC-------CcccccccccCCCCEEEEEe---CCCEEEEEEeCCCC
Confidence 34337999999999765 58876666665543221 11011112478999998888 47899999998754
Q ss_pred hhccceeeEEEc
Q 008799 130 LRATVHGAIVIL 141 (553)
Q Consensus 130 ~~~Gl~G~liV~ 141 (553)
||.|.|+|+
T Consensus 98 ---~M~G~I~V~ 106 (106)
T 1id2_A 98 ---FMRGKVIVE 106 (106)
T ss_dssp ---TCEEEEEEC
T ss_pred ---CCEEEEEEC
Confidence 999999984
No 103
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A
Probab=98.18 E-value=4.3e-06 Score=71.50 Aligned_cols=88 Identities=8% Similarity=-0.002 Sum_probs=59.2
Q ss_pred CeEeecCC-CEEEEEEEeCCCCC-----ce--eeeCCCcc-------------cCCCCCCC-CCCccCCCCCCCCceEEE
Q 008799 54 PTLHARED-DNVIVRVTNHVKYN-----VT--IHWHGVRQ-------------LRTGWYDG-PAYITQCPIQPGQSYVYN 111 (553)
Q Consensus 54 P~i~v~~G-d~v~v~l~N~l~~~-----~~--iH~HG~~~-------------~~~~~~DG-v~~~tq~~i~pG~~~~y~ 111 (553)
..|.|++| |+|+|+|+|....+ ++ |--+|... ...+..|. +-..+ ..|.||++.++.
T Consensus 18 ~~i~V~~G~~~vtv~~~N~g~~~~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~v~~~~~~~~~~t-~~l~pGet~svt 96 (129)
T 1cuo_A 18 RSISVPASCAEFTVNFEHKGHMPKTGMGHNWVLAKSADVGDVAKEGAHAGADNNFVTPGDKRVIAFT-PIIGGGEKTSVK 96 (129)
T ss_dssp SEEEEETTCSEEEEEEEECSSSCHHHHCBCCEEEEGGGHHHHHHHHHTTCGGGTTSCTTCTTCSEEC-CCBCTTCEEEEE
T ss_pred CeEEEcCCCeEEEEEEEECCCCcccccccceEEecCcchhhhHHHhhhccccccccccccccceeee-eEECCCCEEEEE
Confidence 58999999 99999999987543 33 33333110 00000111 10111 347999999999
Q ss_pred EEeC--CCCcceEEecChhhhhccceeeEEEcC
Q 008799 112 FTLT--GQRGTLLWHAHISWLRATVHGAIVILP 142 (553)
Q Consensus 112 ~~~~--~~~Gt~wYH~H~~~~~~Gl~G~liV~~ 142 (553)
|+++ .++|+|||.|-..+.+.||.|-|+|.+
T Consensus 97 f~~~~~~~~G~Y~f~C~~pgH~~~M~G~i~V~~ 129 (129)
T 1cuo_A 97 FKVSALSKDEAYTYFCSYPGHFSMMRGTLKLEE 129 (129)
T ss_dssp EEGGGCCTTSCEEEECCSTTCTTTSEEEEEEEC
T ss_pred EeccccCCCceEEEEeCCCCchHcCEEEEEEeC
Confidence 9972 289999999987766669999999963
No 104
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae}
Probab=98.13 E-value=5e-06 Score=74.05 Aligned_cols=92 Identities=9% Similarity=0.097 Sum_probs=60.5
Q ss_pred CCCCCeEee-cCCCEEEEEEEeCCCCC-----ce--eeeCCCcc--------cCC-CC---CCCCCCccCCCCCCCCceE
Q 008799 50 KFPGPTLHA-REDDNVIVRVTNHVKYN-----VT--IHWHGVRQ--------LRT-GW---YDGPAYITQCPIQPGQSYV 109 (553)
Q Consensus 50 ~~pGP~i~v-~~Gd~v~v~l~N~l~~~-----~~--iH~HG~~~--------~~~-~~---~DGv~~~tq~~i~pG~~~~ 109 (553)
+|--..|.| ++||+|+|+|+|....+ ++ |--+|... ... .+ .|..-......|.||++.+
T Consensus 54 ~F~P~~itV~kaG~~Vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~v~~~~m~~~~~~~v~~~d~~vl~~t~~l~pGet~s 133 (167)
T 3ay2_A 54 QFNTKDIQVSKACKEFTITLKHTGTQPKASMGHNLVIAKAEDMDGVFKDGVGAADTDYVKPDDARVVAHTKLIGGGEESS 133 (167)
T ss_dssp CBSCSEEEEETTCSSEEEEEEECSCSCHHHHCBCCEEEEGGGHHHHHHHHGGGGGGTTSCTTCTTEEEECCCBCTTCEEE
T ss_pred eEecceEEEecCCCEEEEEEEECCCCccccccceEEeccCcchhhhHHHhhhccccccccccccchhccceeeCCCCEEE
Confidence 443358999 99999999999997543 33 22222100 000 00 1110000113589999999
Q ss_pred EEEEeCC--CCcceEEecChhhhhccceeeEEEcC
Q 008799 110 YNFTLTG--QRGTLLWHAHISWLRATVHGAIVILP 142 (553)
Q Consensus 110 y~~~~~~--~~Gt~wYH~H~~~~~~Gl~G~liV~~ 142 (553)
+.|++ . ++|+|||+|-..+...||.|-|+|.+
T Consensus 134 vtf~~-~~lkpG~Y~f~Ct~PgH~~gM~G~i~V~~ 167 (167)
T 3ay2_A 134 LTLDP-AKLADGDYKFACTFPGHGALMNGKVTLVD 167 (167)
T ss_dssp EEECG-GGGTTSCEEEECCSTTGGGTSEEEEEEEC
T ss_pred EEEec-CCCCCcEEEEEcCCCCchhcCEEEEEEeC
Confidence 99987 4 79999999987776669999999963
No 105
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A
Probab=98.12 E-value=4.2e-06 Score=68.64 Aligned_cols=84 Identities=13% Similarity=0.097 Sum_probs=56.4
Q ss_pred EEEecCCCEEEEEEEcCCCCCCCCCCeeecCCceEEEeeCCCCCCCCCCCCCCCCCCCCc-ceeeEecCCcEEEEEEEec
Q 008799 430 LYRLAYNSTVQLVLQGTTVIAPENHPTHLHGFNFFAVGKGSGNFDPNKDPQKFNLVDPVE-RNTISVPTAGWTAIRFRAD 508 (553)
Q Consensus 430 ~~~~~~g~~v~~~i~n~~~~~~~~HP~HlHG~~f~Vl~~g~g~~~~~~~~~~~~~~~p~~-rDTv~vp~~g~~~irf~ad 508 (553)
.+.++.|++|+|+ |.+ ...|.++++.-. + ++.. ..... ..+.+ .+++.+.+|+...+.| +
T Consensus 18 ~i~v~~G~tV~~~--n~~---~~~H~~~~~~~~--------~-~~~~--~~~~~-~~~~~~~~~~~~~pG~~~~~tf--~ 78 (102)
T 1kdj_A 18 SITVSAGEAVEFT--LVG---ETGHNIVFDIPA--------G-APGT--VASEL-KAASMDENDLLSEDEPSFKAKV--S 78 (102)
T ss_dssp EEEECTTCCEEEE--ECS---SSCBCCEECCCT--------T-CCHH--HHHHH-HHTSCCTTCCBBTTBCEEEECC--C
T ss_pred EEEECCCCEEEEE--ECC---CCCeEEEEeCcc--------c-cccc--ccchh-hcccccccceecCCCCEEEEEe--C
Confidence 4688999999986 532 457999887210 0 0000 00000 00112 3567788988877766 8
Q ss_pred CceeeEEeecchhhHhccceEEEEEe
Q 008799 509 NPGVWFLHCHLEVHTSWGLKMAFVVD 534 (553)
Q Consensus 509 npG~w~~HCHil~H~d~GM~~~~~V~ 534 (553)
.||.|.|||+ .|.++||...+.|+
T Consensus 79 ~~G~y~y~C~--~H~~~gM~G~i~V~ 102 (102)
T 1kdj_A 79 TPGTYTFYCT--PHKSANMKGTLTVK 102 (102)
T ss_dssp SCEEEEEECS--TTGGGTCEEEEEEC
T ss_pred CCeEEEEEeC--CCcccCCeEEEEEC
Confidence 9999999999 99999999999884
No 106
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A*
Probab=98.12 E-value=9.7e-06 Score=68.80 Aligned_cols=75 Identities=15% Similarity=0.127 Sum_probs=49.3
Q ss_pred CeEeecCCCEEEEEEEeCCCCCceeeeCCCcccCCCCCCCCCCccCCCCCCCCceEEEEEeCCCCcceEEecChhhhhcc
Q 008799 54 PTLHAREDDNVIVRVTNHVKYNVTIHWHGVRQLRTGWYDGPAYITQCPIQPGQSYVYNFTLTGQRGTLLWHAHISWLRAT 133 (553)
Q Consensus 54 P~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~pG~~~~y~~~~~~~~Gt~wYH~H~~~~~~G 133 (553)
+.|++++||+|++ .|... ++++..+ ...+-||... ....||++++|.| +.+|+|+|+|..|. .+|
T Consensus 21 ~~i~V~~GdtV~f--~~~~~-~H~v~~~-----~~~~p~~~~~---~~~~pG~t~~~tF---~~~G~y~y~C~~H~-~~g 85 (123)
T 1paz_A 21 AYIKANPGDTVTF--IPVDK-GHNVESI-----KDMIPEGAEK---FKSKINENYVLTV---TQPGAYLVKCTPHY-AMG 85 (123)
T ss_dssp SEEEECTTCEEEE--EESSS-SCCCEEC-----TTCSCTTCCC---CBCCTTCCEEEEC---CSCEEEEEECTTTG-GGT
T ss_pred CEEEECCCCEEEE--EECCC-CeEEEEe-----cccCCCCccc---eecCCCCEEEEEe---CCCEEEEEEeCCcc-cCC
Confidence 7999999999755 55533 3444332 1111123211 2346899888877 47999999997432 269
Q ss_pred ceeeEEEcCC
Q 008799 134 VHGAIVILPK 143 (553)
Q Consensus 134 l~G~liV~~~ 143 (553)
|.|.|+|.++
T Consensus 86 M~G~I~V~~~ 95 (123)
T 1paz_A 86 MIALIAVGDS 95 (123)
T ss_dssp CEEEEEESSS
T ss_pred CEEEEEEcCC
Confidence 9999999874
No 107
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A
Probab=98.11 E-value=1e-05 Score=65.79 Aligned_cols=77 Identities=10% Similarity=0.068 Sum_probs=53.9
Q ss_pred CeEeecCCCEEEEEEEeCCCCCceeeeCCCcccCCCCCCCCCC----ccCCCCCCCCceEEEEEeCCCCcceEEecChhh
Q 008799 54 PTLHAREDDNVIVRVTNHVKYNVTIHWHGVRQLRTGWYDGPAY----ITQCPIQPGQSYVYNFTLTGQRGTLLWHAHISW 129 (553)
Q Consensus 54 P~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~----~tq~~i~pG~~~~y~~~~~~~~Gt~wYH~H~~~ 129 (553)
+.|++++||+|++ .|....++++....-.. -+|.-. .....+.||+++++.| +.+|+|+|+|-.|.
T Consensus 18 ~~i~v~~GdtV~~--~n~~~~~H~v~~~~~~~-----p~g~~~~~~~~~~~~~~~g~~~~~tf---~~~G~y~y~C~~H~ 87 (98)
T 1iuz_A 18 SKISVAAGEAIEF--VNNAGFPHNIVFDEDAV-----PAGVDADAISYDDYLNSKGETVVRKL---STPGVYGVYCEPHA 87 (98)
T ss_dssp SEEEECTTCEEEE--EECSSCCEEEEECTTSS-----CTTCCHHHHCEEEEECSTTCEEEEEC---CSCEEEEEECTTTG
T ss_pred CEEEECCCCEEEE--EECCCCCEEEEEeCCCC-----ccccccccccccccccCCCCEEEEEc---CCCEEEEEEchhhc
Confidence 7999999999655 58876777777664221 122110 0012478999988887 57999999998642
Q ss_pred hhccceeeEEEc
Q 008799 130 LRATVHGAIVIL 141 (553)
Q Consensus 130 ~~~Gl~G~liV~ 141 (553)
.+||.|.|+|+
T Consensus 88 -~~gM~G~I~V~ 98 (98)
T 1iuz_A 88 -GAGMKMTITVQ 98 (98)
T ss_dssp -GGTCEEEEEEC
T ss_pred -cCCCEEEEEEC
Confidence 25999999985
No 108
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1
Probab=98.06 E-value=9.9e-06 Score=68.74 Aligned_cols=76 Identities=17% Similarity=0.203 Sum_probs=50.2
Q ss_pred CeEeecCCCEEEEEEEeCCCCCceeeeCCCcccCCCCCCCCCCccCCCCCCCCceEEEEEeCCCCcceEEecChhhhhcc
Q 008799 54 PTLHAREDDNVIVRVTNHVKYNVTIHWHGVRQLRTGWYDGPAYITQCPIQPGQSYVYNFTLTGQRGTLLWHAHISWLRAT 133 (553)
Q Consensus 54 P~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~pG~~~~y~~~~~~~~Gt~wYH~H~~~~~~G 133 (553)
+.|++++||+|+ +.|... ++++..+ ...+-||... ..+.||++++|.| +.+|+|+|+|..|. .+|
T Consensus 21 ~~i~V~~GdtV~--f~n~~~-~H~v~~~-----~~~~p~~~~~---~~~~pG~t~~~tF---~~~G~y~y~C~~H~-~~g 85 (123)
T 1pmy_A 21 ALVRLKPGDSIK--FLPTDK-GHNVETI-----KGMAPDGADY---VKTTVGQEAVVKF---DKEGVYGFKCAPHY-MMG 85 (123)
T ss_dssp SEEEECTTCEEE--EECSSS-SCCCEEC-----TTSSCTTCCC---CBCCTTSCEEEEC---CSCEEEEEECSTTT-TTT
T ss_pred CEEEECCCCEEE--EEECCC-CcEEEEe-----cccCCCCccc---eecCCCCEEEEEe---CCCeEEEEEeCCcc-ccC
Confidence 799999999965 555533 4443332 1111233211 2357999988887 47999999997432 269
Q ss_pred ceeeEEEcCCC
Q 008799 134 VHGAIVILPKR 144 (553)
Q Consensus 134 l~G~liV~~~~ 144 (553)
|.|.|+|.++.
T Consensus 86 M~G~I~V~~~~ 96 (123)
T 1pmy_A 86 MVALVVVGDKR 96 (123)
T ss_dssp CEEEEEESSCC
T ss_pred CEEEEEEcCCC
Confidence 99999998653
No 109
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A
Probab=98.04 E-value=8.3e-06 Score=66.45 Aligned_cols=82 Identities=11% Similarity=0.161 Sum_probs=56.5
Q ss_pred EEEecCCCEEEEEEEcCCCCCCCCCCeeecCCceEEEeeCCCCCCCCCCCCCCCCCCCCcceeeEecCCcEEEEEEEecC
Q 008799 430 LYRLAYNSTVQLVLQGTTVIAPENHPTHLHGFNFFAVGKGSGNFDPNKDPQKFNLVDPVERNTISVPTAGWTAIRFRADN 509 (553)
Q Consensus 430 ~~~~~~g~~v~~~i~n~~~~~~~~HP~HlHG~~f~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~adn 509 (553)
.+.++.|++|.| .|.+ ...|.++++...+- . + .+ ... ....++.+.+.+|....+.| +.
T Consensus 18 ~i~v~~G~tV~~--~n~~---~~~H~v~~~~~~~p---~--~-~~------~~~--~~~~~~~~~~~~G~~~~~tf--~~ 76 (99)
T 1plc_A 18 EFSISPGEKIVF--KNNA---GFPHNIVFDEDSIP---S--G-VD------ASK--ISMSEEDLLNAKGETFEVAL--SN 76 (99)
T ss_dssp EEEECTTCEEEE--EECS---SCCBCCEECTTSSC---T--T-CC------HHH--HCCCTTCCBCSTTCEEEEEC--CS
T ss_pred EEEECCCCEEEE--EECC---CCceEEEEeCCCCc---c--c-cc------ccc--cccccCccccCCCCEEEEEE--CC
Confidence 478899999988 4533 46799998864320 0 0 00 000 00123456788988877766 69
Q ss_pred ceeeEEeecchhhHhccceEEEEEe
Q 008799 510 PGVWFLHCHLEVHTSWGLKMAFVVD 534 (553)
Q Consensus 510 pG~w~~HCHil~H~d~GM~~~~~V~ 534 (553)
||.|.|||+ .|..+||...+.|+
T Consensus 77 ~G~y~~~C~--~H~~~gM~G~i~V~ 99 (99)
T 1plc_A 77 KGEYSFYCS--PHQGAGMVGKVTVN 99 (99)
T ss_dssp CEEEEEECG--GGTTTTCEEEEEEC
T ss_pred CceEEEEcC--CCcccCCEEEEEEC
Confidence 999999999 79999999999874
No 110
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=98.01 E-value=1.6e-05 Score=83.20 Aligned_cols=97 Identities=18% Similarity=0.249 Sum_probs=66.0
Q ss_pred ecccce--eeEEEECCCCCCCeEeecCCCEEEEEEEeCCCCCceeeeCCCcccCCCCCCCCCCccCCCCCCCCceEEEEE
Q 008799 36 TKLCAS--KSIVTVNGKFPGPTLHAREDDNVIVRVTNHVKYNVTIHWHGVRQLRTGWYDGPAYITQCPIQPGQSYVYNFT 113 (553)
Q Consensus 36 ~~~g~~--~~~~~~NG~~pGP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~pG~~~~y~~~ 113 (553)
.++|.+ ..+...+-+|-.+.|+|.+||+|++.|+|.....-.+ ||..+.. -|+ . .-+.||++.++.|.
T Consensus 538 ~RdGnkV~V~Mta~~~~FsP~eI~VP~GdtVrfiLTN~D~veDVi--HSF~IPs----lGI---K-~DaiPGrtnsvtFt 607 (638)
T 3sbq_A 538 IRDGNKVRVYMTSMAPAFGVQEFTVKQGDEVTVTITNIDQIEDVS--HGFVVVN----HGV---S-MEISPQQTSSITFV 607 (638)
T ss_dssp EEETTEEEEEEEEETTEESCCEEEEETTCEEEEEEEECCCSTTCC--EEEEETT----TTE---E-EEECTTCEEEEEEE
T ss_pred ccCCceEEEEEEEEcccccCCEEEEecCceeEEEEecCCcCCCce--eeeEecC----CCc---e-eeeCCCCeEEEEEE
Confidence 345543 3444455566557999999999999999974322222 2222221 111 1 24789999999999
Q ss_pred eCCCCcceEEecChh-h-hhccceeeEEEcCC
Q 008799 114 LTGQRGTLLWHAHIS-W-LRATVHGAIVILPK 143 (553)
Q Consensus 114 ~~~~~Gt~wYH~H~~-~-~~~Gl~G~liV~~~ 143 (553)
+ +.+|+|||+|..- + ...+|.|-++|+++
T Consensus 608 a-dkPGvY~y~CSE~CGa~Hs~M~G~ViVEPa 638 (638)
T 3sbq_A 608 A-DKPGLHWYYCSWFCHALHMEMVGRMMVEPA 638 (638)
T ss_dssp C-CSCEEEEEECCSCCSTTCTTCEEEEEEECC
T ss_pred c-CCCEEEEEECCCcCCCCcccceEEEEEecC
Confidence 7 8999999999852 2 22789999999874
No 111
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A
Probab=97.98 E-value=1.7e-05 Score=70.10 Aligned_cols=89 Identities=17% Similarity=0.321 Sum_probs=59.9
Q ss_pred eEEEecCCCEEEEEEEcCCCCCCCCCCeeecCCceEEEeeCCCCCCCCCCCCCCCCCCCCc---ceeeEecCCc--EEEE
Q 008799 429 RLYRLAYNSTVQLVLQGTTVIAPENHPTHLHGFNFFAVGKGSGNFDPNKDPQKFNLVDPVE---RNTISVPTAG--WTAI 503 (553)
Q Consensus 429 ~~~~~~~g~~v~~~i~n~~~~~~~~HP~HlHG~~f~Vl~~g~g~~~~~~~~~~~~~~~p~~---rDTv~vp~~g--~~~i 503 (553)
+.++++.|+.|.+++.|.+ ....|-+-++. .+. .+... + ...+.. .-+..|.||+ ...+
T Consensus 61 p~i~V~~GD~V~~~~tN~~--~~~~H~~~i~~-------~~~-~~~~~--~----~~~~~~~~~~~~~~i~PG~sgt~t~ 124 (154)
T 2cal_A 61 PTLEIPAGATVDVTFINTN--KGFGHSFDITK-------KGP-PYAVM--P----VIDPIVAGTGFSPVPKDGKFGYTDF 124 (154)
T ss_dssp CEEEECTTCEEEEEEEECC--TTCCCCCEEES-------CCS-CCCSS--C----CCCSEEEEBCCCCCCBTTBEEEEEE
T ss_pred CEEEEeCCCEEEEEEEcCC--CCeeeEEEEee-------cCc-chhcc--c----cccccccccccccccCCCCceEEEE
Confidence 3589999999999999953 13455555542 111 11100 0 000000 0012567888 8999
Q ss_pred EEEecCceeeEEeecchhhHhccceEEEEEe
Q 008799 504 RFRADNPGVWFLHCHLEVHTSWGLKMAFVVD 534 (553)
Q Consensus 504 rf~adnpG~w~~HCHil~H~d~GM~~~~~V~ 534 (553)
+|++ .||.|.||||+..|...||-..+.|+
T Consensus 125 tft~-~pGtY~y~C~~~gH~~~GM~G~IiV~ 154 (154)
T 2cal_A 125 TWHP-TAGTYYYVCQIPGMAATGMFGKIVVK 154 (154)
T ss_dssp EECC-CSEEEEEECCSTTTGGGTCEEEEEEC
T ss_pred EEEE-CCceEEEECCCCCHHHCCCEEEEEEC
Confidence 9999 99999999999999999999999874
No 112
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C*
Probab=97.98 E-value=5.2e-05 Score=64.58 Aligned_cols=91 Identities=11% Similarity=0.111 Sum_probs=60.1
Q ss_pred CCCCCeEee-cCCCEEEEEEEeCCCCC-----ceeeeC--CCcc-------------cCCCCCCCCCCc-cCCCCCCCCc
Q 008799 50 KFPGPTLHA-REDDNVIVRVTNHVKYN-----VTIHWH--GVRQ-------------LRTGWYDGPAYI-TQCPIQPGQS 107 (553)
Q Consensus 50 ~~pGP~i~v-~~Gd~v~v~l~N~l~~~-----~~iH~H--G~~~-------------~~~~~~DGv~~~-tq~~i~pG~~ 107 (553)
+|--..|.| ++|++|+|+|+|....+ +++-+- +... .-.+..|.- .+ ....|.||++
T Consensus 13 ~F~p~~i~V~k~G~~vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~~-~~~~t~~l~pGes 91 (128)
T 2iaa_C 13 QFNTKSIVVDKTCKEFTINLKHTGKLPKAAMGHNVVVSKKSDESAVATDGMKAGLNNDYVKAGDER-VIAHTSVIGGGET 91 (128)
T ss_dssp CBSCSEEEECTTCSEEEEEEEECSCSCHHHHCBCCEEEETTHHHHHHHHHHHHCGGGTTSCTTCTT-EEEECCCBCTTCE
T ss_pred eEecCEEEEecCCcEEEEEEEECCCCcccCCCceEEEccccchhhHHHhhhhccccccccccccch-hhccceeeCCCCE
Confidence 343358999 99999999999997553 443321 1000 000001110 01 1134799999
Q ss_pred eEEEEEeCC--CCcc-eEEecChhhhhccceeeEEEcC
Q 008799 108 YVYNFTLTG--QRGT-LLWHAHISWLRATVHGAIVILP 142 (553)
Q Consensus 108 ~~y~~~~~~--~~Gt-~wYH~H~~~~~~Gl~G~liV~~ 142 (553)
.++.|++ . .+|+ |+|.|-..+...||.|-|+|.+
T Consensus 92 ~~vtf~~-~~l~~G~~Y~f~C~~PgH~~gM~G~i~V~~ 128 (128)
T 2iaa_C 92 DSVTFDV-SKLKEGEDYAFFCSFPGHWSIMKGTIELGS 128 (128)
T ss_dssp EEEEEES-SCCCTTCCEEEECCSTTCTTTSEEEEEECC
T ss_pred EEEEEec-cccCCCceEEEEECCCChhHCCEEEEEEeC
Confidence 9999997 5 6885 9999988777779999999963
No 113
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A
Probab=97.95 E-value=2.9e-05 Score=66.30 Aligned_cols=87 Identities=13% Similarity=0.082 Sum_probs=57.9
Q ss_pred CeEee-cCCCEEEEEEEeCCCCC-----ce--eeeCCCcc-------------cCCCCCCCCCCc-cCCCCCCCCceEEE
Q 008799 54 PTLHA-REDDNVIVRVTNHVKYN-----VT--IHWHGVRQ-------------LRTGWYDGPAYI-TQCPIQPGQSYVYN 111 (553)
Q Consensus 54 P~i~v-~~Gd~v~v~l~N~l~~~-----~~--iH~HG~~~-------------~~~~~~DGv~~~-tq~~i~pG~~~~y~ 111 (553)
..|.| ++||+|+|+|+|....+ ++ |--+|... .-.+..|.- .+ ....|.||++.+..
T Consensus 18 ~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~t~~l~pGet~svt 96 (129)
T 2ccw_A 18 KEIVVDKSCKQFTMHLKHVGKMAKVAMGHNLVLTKDADKQAVATDGMGAGLAQDYVKAGDTR-VIAHTKVIGGGESDSVT 96 (129)
T ss_dssp SEEEECTTCSEEEEEEEECSCCCHHHHCBCCEEEEGGGHHHHHHHHHHHCGGGTTSCTTCTT-EEEECCCBCTTCEEEEE
T ss_pred ceEEEecCCCEEEEEEEECCCcccccCcceEEEcCccchhhhHHHhhhhccccccccccccc-ceeeeeEECCCCEEEEE
Confidence 58999 99999999999997543 33 32222110 000001110 01 11357999999999
Q ss_pred EEeCC--CCcc-eEEecChhhhhccceeeEEEcC
Q 008799 112 FTLTG--QRGT-LLWHAHISWLRATVHGAIVILP 142 (553)
Q Consensus 112 ~~~~~--~~Gt-~wYH~H~~~~~~Gl~G~liV~~ 142 (553)
|++ . .+|+ |||.|-..+...||.|-|+|.+
T Consensus 97 f~~-~~l~~G~~Y~f~C~~pgH~~gM~G~i~V~~ 129 (129)
T 2ccw_A 97 FDV-SKIAAGENYAYFCSFPGHWAMMKGTLKLGS 129 (129)
T ss_dssp EEG-GGSCTTCCEEEECCSTTGGGTSEEEEEECC
T ss_pred Eec-cccCCCceEEEEeCCCChhHcCEEEEEEeC
Confidence 997 4 5665 9999987777679999999963
No 114
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=97.95 E-value=2.6e-05 Score=83.33 Aligned_cols=78 Identities=15% Similarity=0.357 Sum_probs=62.9
Q ss_pred eEEEecCCCEEEEEEEcCCCCCCCCCCeeecCCceEEEeeCCCCCCCCCCCCCCCCCCCCcceeeEecCCcEEEEEEEec
Q 008799 429 RLYRLAYNSTVQLVLQGTTVIAPENHPTHLHGFNFFAVGKGSGNFDPNKDPQKFNLVDPVERNTISVPTAGWTAIRFRAD 508 (553)
Q Consensus 429 ~~~~~~~g~~v~~~i~n~~~~~~~~HP~HlHG~~f~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~ad 508 (553)
+.+.++.|+.|+|.+.|.....+..|.|+++++.+ -..+.||....++|+++
T Consensus 513 p~I~V~~Gd~V~~~ltN~d~~~Dv~Hgf~ip~~gv----------------------------~~~i~PG~t~t~~Fta~ 564 (595)
T 1fwx_A 513 ESFTVKEGDEVTVIVTNLDEIDDLTHGFTMGNYGV----------------------------AMEIGPQMTSSVTFVAA 564 (595)
T ss_dssp SEEEEETTCEEEEEEEECCCSTTCCEEEEETTTTE----------------------------EEEECTTCEEEEEEECC
T ss_pred CEEEEECCCEEEEEEEeCCCCCCceeeEEecCCCc----------------------------ceeeCCCCeEEEEEECC
Confidence 45789999999999999542234579998887532 14678899999999999
Q ss_pred CceeeEEeec---chhhHhccceEEEEEeCC
Q 008799 509 NPGVWFLHCH---LEVHTSWGLKMAFVVDNG 536 (553)
Q Consensus 509 npG~w~~HCH---il~H~d~GM~~~~~V~~~ 536 (553)
.||.|.|||| ...|. ||...+.|++.
T Consensus 565 ~pGtY~yhC~e~Cg~~H~--gM~G~IiV~p~ 593 (595)
T 1fwx_A 565 NPGVYWYYCQWFCHALHM--EMRGRMLVEPK 593 (595)
T ss_dssp SCEEEEEECCSCCSTTCT--TCEEEEEEECC
T ss_pred CCEEEEEECCCCCCCCcc--CCEEEEEEEcC
Confidence 9999999999 45775 99999999854
No 115
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A
Probab=97.92 E-value=8.1e-05 Score=63.41 Aligned_cols=91 Identities=11% Similarity=0.051 Sum_probs=59.0
Q ss_pred CCCCCeEee-cCCCEEEEEEEeCCCCC-----ceeee--CCCcc-------cCCCCCCCCC-----Ccc-CCCCCCCCce
Q 008799 50 KFPGPTLHA-REDDNVIVRVTNHVKYN-----VTIHW--HGVRQ-------LRTGWYDGPA-----YIT-QCPIQPGQSY 108 (553)
Q Consensus 50 ~~pGP~i~v-~~Gd~v~v~l~N~l~~~-----~~iH~--HG~~~-------~~~~~~DGv~-----~~t-q~~i~pG~~~ 108 (553)
+|--..|.| ++||+|+|+|+|....+ +++-. .|... .....+|=++ .+. ...|.||++.
T Consensus 14 ~F~p~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~pGet~ 93 (128)
T 1nwp_A 14 SFNTKDIAIDKSCKTFTVELTHSGSLPKNVMGHNLVISKEADMQPIATDGLSAGIDKQYLKDGDARVIAHTKVIGAGEKD 93 (128)
T ss_dssp CBSCSEEEECTTCSEEEEEEEECSSCCHHHHCBCCEEEEGGGHHHHHHHHTTTCGGGTTSCTTCTTEEEECCCBCTTCEE
T ss_pred cEecCEEEEecCCCEEEEEEEECCCCcccCCCceEEEccccchhhHHHHHhhccccccccccccchhheeeeeeCCCCEE
Confidence 343358999 99999999999997543 44332 22110 0000011011 010 1248999999
Q ss_pred EEEEEeCC--CCcc-eEEecChhhhhccceeeEEEc
Q 008799 109 VYNFTLTG--QRGT-LLWHAHISWLRATVHGAIVIL 141 (553)
Q Consensus 109 ~y~~~~~~--~~Gt-~wYH~H~~~~~~Gl~G~liV~ 141 (553)
+..|+. . .+|+ |||.|-..+...||.|-|+|.
T Consensus 94 svtf~~-~~l~~G~~Y~f~C~~PgH~~gM~G~i~V~ 128 (128)
T 1nwp_A 94 SVTFDV-SKLAAGEKYGFFCSFPGHISMMKGTVTLK 128 (128)
T ss_dssp EEEEEG-GGSCTTSCEEEECCSTTCGGGSEEEEEEC
T ss_pred EEEEec-cccCCCceEEEEECCCChhHCCEEEEEEC
Confidence 999997 4 5776 999998777666999999984
No 116
>2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A
Probab=97.81 E-value=4.6e-05 Score=64.48 Aligned_cols=74 Identities=14% Similarity=0.073 Sum_probs=50.1
Q ss_pred CeEeecCCCEEEEEEEeCCCCCceeeeCCCcccCCCCCCCCCCccCCCCCCCCceEEEEEeCCCCcceEEecChhhhhcc
Q 008799 54 PTLHAREDDNVIVRVTNHVKYNVTIHWHGVRQLRTGWYDGPAYITQCPIQPGQSYVYNFTLTGQRGTLLWHAHISWLRAT 133 (553)
Q Consensus 54 P~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~pG~~~~y~~~~~~~~Gt~wYH~H~~~~~~G 133 (553)
+.|++++||+|++ .|... .++++.... .+-+|.. ...+.||++++|.| +.+|+|+|+|-.|..
T Consensus 21 ~~i~V~~GdtV~f--~n~d~-~H~v~~~~~-----~~p~~~~---~~~~~~g~t~~~tF---~~~G~y~y~C~~H~~--- 83 (122)
T 2ux6_A 21 ASLKVAPGDTVTF--IPTDK-GHNVETIKG-----MIPDGAE---AFKSKINENYKVTF---TAPGVYGVKCTPHPF--- 83 (122)
T ss_dssp SEEEECTTEEEEE--EESSS-SCCCEECTT-----CSCTTCC---CCBCCTTCCEEEEE---CSCEEEEEEETTEEE---
T ss_pred CEEEECCCCEEEE--EECCC-CcEEEEccc-----ccCCCcc---eeecCCCCEEEEEe---CCCEEEEEEeCCCcc---
Confidence 7999999998655 56643 444444321 1112211 12457899998888 478999999987543
Q ss_pred ceeeEEEcCCC
Q 008799 134 VHGAIVILPKR 144 (553)
Q Consensus 134 l~G~liV~~~~ 144 (553)
|.|.|+|.+..
T Consensus 84 M~G~I~V~~~p 94 (122)
T 2ux6_A 84 MVGVVQVGDAP 94 (122)
T ss_dssp EEEEEEESSSC
T ss_pred CEEEEEEeCCC
Confidence 99999998743
No 117
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ...
Probab=97.80 E-value=6.8e-05 Score=61.70 Aligned_cols=72 Identities=17% Similarity=0.224 Sum_probs=50.1
Q ss_pred EEEecCCCEEEEEEEcCCCCCCCCCCeeecCCceEEEeeCCCCCCCCCCCCCCCCCCCCcceeeEecCCcEEEEEEEecC
Q 008799 430 LYRLAYNSTVQLVLQGTTVIAPENHPTHLHGFNFFAVGKGSGNFDPNKDPQKFNLVDPVERNTISVPTAGWTAIRFRADN 509 (553)
Q Consensus 430 ~~~~~~g~~v~~~i~n~~~~~~~~HP~HlHG~~f~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~adn 509 (553)
.+.++.|+.|+|+ |.. ...|.+|+|... .|. +. -++-.+.+|+...+.| +.
T Consensus 34 ~i~v~~Gd~V~~~--N~d---~~~H~v~~~~~~-------~g~--------------~~-~~~~~~~pG~~~~~tf--~~ 84 (105)
T 2ov0_A 34 ELHVKVGDTVTWI--NRE---AMPHNVHFVAGV-------LGE--------------AA-LKGPMMKKEQAYSLTF--TE 84 (105)
T ss_dssp EEEECTTCEEEEE--ECS---SSCBCCEECTTT-------SSS--------------SC-EECCCBCTTEEEEEEE--CS
T ss_pred EEEECCCCEEEEE--ECC---CCCEEEEEcCCC-------CCc--------------cc-ccccccCCCCEEEEEe--CC
Confidence 5788999999985 543 457999987521 010 00 1122467887766665 89
Q ss_pred ceeeEEeecchhhHhccceEEEEEe
Q 008799 510 PGVWFLHCHLEVHTSWGLKMAFVVD 534 (553)
Q Consensus 510 pG~w~~HCHil~H~d~GM~~~~~V~ 534 (553)
||.|.|||++ |. ||.+.+.|+
T Consensus 85 ~G~y~y~C~~--H~--gM~G~i~V~ 105 (105)
T 2ov0_A 85 AGTYDYHCTP--HP--FMRGKVVVE 105 (105)
T ss_dssp CEEEEEECSS--CT--TCEEEEEEC
T ss_pred CEEEEEEeCC--CC--CCEEEEEEC
Confidence 9999999998 65 999999874
No 118
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0
Probab=97.21 E-value=0.00089 Score=56.49 Aligned_cols=74 Identities=14% Similarity=0.205 Sum_probs=50.6
Q ss_pred EEEecCCCEEEEEEEcCCCCCCCCCCeeecCCceEEEeeCCCCCCCCCCCCCCCCCCCCcceeeEecCCcEEEEEEEecC
Q 008799 430 LYRLAYNSTVQLVLQGTTVIAPENHPTHLHGFNFFAVGKGSGNFDPNKDPQKFNLVDPVERNTISVPTAGWTAIRFRADN 509 (553)
Q Consensus 430 ~~~~~~g~~v~~~i~n~~~~~~~~HP~HlHG~~f~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~adn 509 (553)
.++++.|++|+|+..+ ..|.+..+.. .+... .+...+.++....+.| +.
T Consensus 23 ~i~V~~GDTV~f~n~~------~~Hnv~~~~~----------~~p~g-------------~~~~~~~pg~t~s~TF--~~ 71 (124)
T 3ef4_A 23 FVKVEAGDTVKFVPTD------KSHNAESVRE----------VWPEG-------------VAPVKGGFSKEVVFNA--EK 71 (124)
T ss_dssp EEEECTTCEEEEECSS------SSCCCEECTT----------TSCTT-------------SCCCBCCTTCCEEEEC--CS
T ss_pred EEEECCCCEEEEEECC------CCccEEEeCC----------cCCCC-------------ccccccCCCCEEEEEe--CC
Confidence 4689999999998432 3566665421 11100 0122345677666555 89
Q ss_pred ceeeEEeecchhhHhccceEEEEEeCC
Q 008799 510 PGVWFLHCHLEVHTSWGLKMAFVVDNG 536 (553)
Q Consensus 510 pG~w~~HCHil~H~d~GM~~~~~V~~~ 536 (553)
||.|.|||- .|...||.+.+.|.++
T Consensus 72 ~G~y~Y~C~--~H~~~GM~G~I~V~~p 96 (124)
T 3ef4_A 72 EGLYVLKCA--PHYGMGMVVLVQVGKP 96 (124)
T ss_dssp SEEEEEECT--TTGGGTCEEEEEESSC
T ss_pred CeEEEEEcC--CCCcCCCEEEEEECCC
Confidence 999999995 8999999999999864
No 119
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti}
Probab=97.21 E-value=0.00069 Score=57.52 Aligned_cols=75 Identities=23% Similarity=0.318 Sum_probs=49.6
Q ss_pred EEEecCCCEEEEEEEcCCCCCCCCCCeeecCCceEEEeeCCCCCCCCCCCCCCCCCCCCcceeeEecCCcEEEEEEEecC
Q 008799 430 LYRLAYNSTVQLVLQGTTVIAPENHPTHLHGFNFFAVGKGSGNFDPNKDPQKFNLVDPVERNTISVPTAGWTAIRFRADN 509 (553)
Q Consensus 430 ~~~~~~g~~v~~~i~n~~~~~~~~HP~HlHG~~f~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~adn 509 (553)
.+.++.|++|.|++.|. .|-+..+.. .+ +.. ...+.+.++....+.| +.
T Consensus 24 ~i~V~~GDtVtf~n~~~------~H~v~~~~~----------~~-P~g------------~~~f~s~pGet~s~TF--~~ 72 (127)
T 3tu6_A 24 VIRAQPGDTVTFVAKDK------GHNSALMKG----------GA-PEG------------AETWKGKINEEITVTL--SK 72 (127)
T ss_dssp EEEECTTCEEEEECSSS------SCCCEECTT----------CS-CTT------------CCCCBCCTTCCCEEEC--CS
T ss_pred EEEECCCCEEEEEECCC------CceEEEccC----------cC-CCC------------ccceecCCCCEEEEEe--CC
Confidence 46899999999986541 355544321 00 100 0011234666555555 89
Q ss_pred ceeeEEeecchhhHhccceEEEEEeCCC
Q 008799 510 PGVWFLHCHLEVHTSWGLKMAFVVDNGK 537 (553)
Q Consensus 510 pG~w~~HCHil~H~d~GM~~~~~V~~~~ 537 (553)
||.|.|||- .|...||...+.|.++.
T Consensus 73 pG~y~y~C~--~H~~~GM~G~I~V~~~~ 98 (127)
T 3tu6_A 73 PGVYMYQCA--PHVGMGMIGAIVVGEPA 98 (127)
T ss_dssp CEEEEEECT--TTGGGTCEEEEEESSCT
T ss_pred CeEEEEEeC--CCCcCCcEEEEEECcCC
Confidence 999999999 69999999999998754
No 120
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A
Probab=97.15 E-value=0.0013 Score=55.46 Aligned_cols=74 Identities=14% Similarity=0.222 Sum_probs=50.4
Q ss_pred EEEecCCCEEEEEEEcCCCCCCCCCCeeecCCceEEEeeCCCCCCCCCCCCCCCCCCCCcceeeEecCCcEEEEEEEecC
Q 008799 430 LYRLAYNSTVQLVLQGTTVIAPENHPTHLHGFNFFAVGKGSGNFDPNKDPQKFNLVDPVERNTISVPTAGWTAIRFRADN 509 (553)
Q Consensus 430 ~~~~~~g~~v~~~i~n~~~~~~~~HP~HlHG~~f~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~adn 509 (553)
.++++.|++|.|++.|. .|-+..+.. .. +.. . +...+.+++...+.| +.
T Consensus 22 ~i~V~~GdtV~f~~~~~------~H~v~~~~~----------~~-P~g-~-----------~~f~~~pg~t~s~TF--~~ 70 (123)
T 3erx_A 22 FVRAEPGDVINFVPTDK------SHNVEAIKE----------IL-PEG-V-----------ESFKSKINESYTLTV--TE 70 (123)
T ss_dssp EEEECTTEEEEEEESST------TCCCEECTT----------SS-CTT-C-----------CCCBCCTTCCEEEEE--CS
T ss_pred EEEECCCCEEEEEECCC------CceEEEcCC----------cC-CCC-c-----------cceecCCCCEEEEEe--CC
Confidence 46889999999987651 355554321 00 000 0 011235677666666 89
Q ss_pred ceeeEEeecchhhHhccceEEEEEeCC
Q 008799 510 PGVWFLHCHLEVHTSWGLKMAFVVDNG 536 (553)
Q Consensus 510 pG~w~~HCHil~H~d~GM~~~~~V~~~ 536 (553)
||.|.|+|- .|...||...+.|+++
T Consensus 71 pG~y~y~C~--~H~~~GM~G~I~V~~~ 95 (123)
T 3erx_A 71 PGLYGVKCT--PHFGMGMVGLVQVGDA 95 (123)
T ss_dssp CEEEEEECG--GGTTTTCEEEEEESSS
T ss_pred CeEEEEEeC--CCCcCCcEEEEEECCC
Confidence 999999999 8999999999999863
No 121
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ...
Probab=97.13 E-value=0.0026 Score=53.33 Aligned_cols=88 Identities=10% Similarity=0.160 Sum_probs=54.0
Q ss_pred CCCCeEeecC-CCEEEEEEEeCCCC-------CceeeeC---------CCccc-CCCC---CCCCCCccCCCCCCCCceE
Q 008799 51 FPGPTLHARE-DDNVIVRVTNHVKY-------NVTIHWH---------GVRQL-RTGW---YDGPAYITQCPIQPGQSYV 109 (553)
Q Consensus 51 ~pGP~i~v~~-Gd~v~v~l~N~l~~-------~~~iH~H---------G~~~~-~~~~---~DGv~~~tq~~i~pG~~~~ 109 (553)
|--..|.|++ |++|+|+|+|.... +..|--. |+..- ...+ .|..-......|.||++.+
T Consensus 15 F~p~~i~V~~~Ge~V~~~l~N~G~~p~~~M~Hn~Vl~~~~~~~~~~~~~m~~~~~~~y~~~~d~~via~t~~l~pGes~~ 94 (125)
T 3fsa_A 15 FNTNAITVDKSCKQFTVNLSHPGNLPKNVMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDDSRVIAHTKLIGSGEKDS 94 (125)
T ss_dssp BSCSEEEECTTCSEEEEEEECCSSCCHHHHCBCCEEEEHHHHHHHHHHHHHHCGGGTTSCTTCTTCCEECCCBCTTCEEE
T ss_pred EecCEEEEecCCCEEEEEEEECCcccccccCceEEEcccchHHHHHHHHHhcChhhccCCCCCccceeccceeCCCcEEE
Confidence 4336999976 99999999999854 2233211 11100 0000 1111000112479999999
Q ss_pred EEEEeC--CCCcceEEecChhhhhccceeeEEEc
Q 008799 110 YNFTLT--GQRGTLLWHAHISWLRATVHGAIVIL 141 (553)
Q Consensus 110 y~~~~~--~~~Gt~wYH~H~~~~~~Gl~G~liV~ 141 (553)
..|+.+ ..+|+|.|.|. +.. ||.|-++|.
T Consensus 95 vtf~~~~l~~~G~y~f~C~--gH~-~M~G~v~V~ 125 (125)
T 3fsa_A 95 VTFDVSKLKEGEQYMFFCA--AHA-AMKGTLTLK 125 (125)
T ss_dssp EEEEGGGC---CCEEEECS--SST-TCEEEEEEC
T ss_pred EEEeCcCcCCCccEEEEcC--CCC-CcEEEEEEC
Confidence 999973 27999999999 444 999999984
No 122
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A
Probab=97.04 E-value=0.0024 Score=51.47 Aligned_cols=80 Identities=18% Similarity=0.284 Sum_probs=52.5
Q ss_pred EEEecCCCEEEEEEEcCCCCCCCCCCeeecCCceEEEeeCCCCCCCCCCCCCCCCCCCCcceeeEecCCcEEEEEEEecC
Q 008799 430 LYRLAYNSTVQLVLQGTTVIAPENHPTHLHGFNFFAVGKGSGNFDPNKDPQKFNLVDPVERNTISVPTAGWTAIRFRADN 509 (553)
Q Consensus 430 ~~~~~~g~~v~~~i~n~~~~~~~~HP~HlHG~~f~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~adn 509 (553)
.+.++.|++|.|+ |.+ ...|-+.+... .+ +. ..+. .....+...+.+|....+.| +.
T Consensus 19 ~i~v~~GdtV~~~--n~~---~~~H~v~~~~~----------~~-p~----g~~~-~~~~~~~~~~~~g~~~~~tf--~~ 75 (98)
T 1iuz_A 19 KISVAAGEAIEFV--NNA---GFPHNIVFDED----------AV-PA----GVDA-DAISYDDYLNSKGETVVRKL--ST 75 (98)
T ss_dssp EEEECTTCEEEEE--ECS---SCCEEEEECTT----------SS-CT----TCCH-HHHCEEEEECSTTCEEEEEC--CS
T ss_pred EEEECCCCEEEEE--ECC---CCCEEEEEeCC----------CC-cc----cccc-ccccccccccCCCCEEEEEc--CC
Confidence 4788999999996 432 34666655431 00 00 0000 00113446788888777766 89
Q ss_pred ceeeEEeecchhhHhccceEEEEEe
Q 008799 510 PGVWFLHCHLEVHTSWGLKMAFVVD 534 (553)
Q Consensus 510 pG~w~~HCHil~H~d~GM~~~~~V~ 534 (553)
||.|.|+|-+ |..+||...+.|+
T Consensus 76 ~G~y~y~C~~--H~~~gM~G~I~V~ 98 (98)
T 1iuz_A 76 PGVYGVYCEP--HAGAGMKMTITVQ 98 (98)
T ss_dssp CEEEEEECTT--TGGGTCEEEEEEC
T ss_pred CEEEEEEchh--hccCCCEEEEEEC
Confidence 9999999986 9999999999874
No 123
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1
Probab=96.87 E-value=0.0039 Score=51.08 Aligned_cols=72 Identities=17% Similarity=0.135 Sum_probs=48.4
Q ss_pred EEEecCCCEEEEEEEcCCCCCCCCCCeeecCCceEEEeeCCCCCCCCCCCCCCCCCCCCcceeeEecCCcEEEEEEEecC
Q 008799 430 LYRLAYNSTVQLVLQGTTVIAPENHPTHLHGFNFFAVGKGSGNFDPNKDPQKFNLVDPVERNTISVPTAGWTAIRFRADN 509 (553)
Q Consensus 430 ~~~~~~g~~v~~~i~n~~~~~~~~HP~HlHG~~f~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~adn 509 (553)
.+.++.|++|.|+ |.+ ...|.+++.... .|. ...++-.+.+|....+.| +.
T Consensus 35 ~i~V~~G~tV~~~--N~d---~~~H~v~~~~~~-------~~~---------------~~~~s~~l~~g~~~~~tf--~~ 85 (106)
T 1id2_A 35 EVTIKAGETVYWV--NGE---VMPHNVAFKKGI-------VGE---------------DAFRGEMMTKDQAYAITF--NE 85 (106)
T ss_dssp EEEECTTCEEEEE--ECS---SSCBCCEECTTT-------SSS---------------SCEECCCBCTTEEEEEEE--CS
T ss_pred EEEECCCCEEEEE--ECC---CCcEEEEEeCCC-------CCc---------------ccccccccCCCCEEEEEe--CC
Confidence 4688999999987 532 345766554321 000 011233567887777666 89
Q ss_pred ceeeEEeecchhhHhccceEEEEEe
Q 008799 510 PGVWFLHCHLEVHTSWGLKMAFVVD 534 (553)
Q Consensus 510 pG~w~~HCHil~H~d~GM~~~~~V~ 534 (553)
||.|.|+|-+ |. ||.+.+.|+
T Consensus 86 ~G~y~~~C~~--H~--~M~G~I~V~ 106 (106)
T 1id2_A 86 AGSYDYFCTP--HP--FMRGKVIVE 106 (106)
T ss_dssp CEEEEEECSS--CT--TCEEEEEEC
T ss_pred CEEEEEEeCC--CC--CCEEEEEEC
Confidence 9999999987 76 999999874
No 124
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=96.73 E-value=0.005 Score=52.66 Aligned_cols=72 Identities=17% Similarity=0.135 Sum_probs=49.2
Q ss_pred EEEecCCCEEEEEEEcCCCCCCCCCCeeecCCceEEEeeCCCCCCCCCCCCCCCCCCCCcceeeEecCCcEEEEEEEecC
Q 008799 430 LYRLAYNSTVQLVLQGTTVIAPENHPTHLHGFNFFAVGKGSGNFDPNKDPQKFNLVDPVERNTISVPTAGWTAIRFRADN 509 (553)
Q Consensus 430 ~~~~~~g~~v~~~i~n~~~~~~~~HP~HlHG~~f~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~adn 509 (553)
.+.++.|++|+|+ |.+ ...|.+++.... .|. ...++-.+.+|....+.| +.
T Consensus 61 ~i~V~~GdtV~~~--N~d---~~~H~v~~~~~~-------~g~---------------~~~~s~~l~pG~t~~~tF--~~ 111 (132)
T 3c75_A 61 EVTIKAGETVYWV--NGE---VMPHNVAFKKGI-------VGE---------------DAFRGEMMTKDQAYAITF--NE 111 (132)
T ss_dssp EEEECTTCEEEEE--ECS---SSCBCCEECTTT-------SSS---------------SCEECCCBCTTEEEEEEE--CS
T ss_pred EEEECCCCEEEEE--ECC---CCceEEEEeCCC-------CCc---------------ccccccccCCCCEEEEEc--CC
Confidence 4788999999986 532 346777664311 000 011233567888777766 79
Q ss_pred ceeeEEeecchhhHhccceEEEEEe
Q 008799 510 PGVWFLHCHLEVHTSWGLKMAFVVD 534 (553)
Q Consensus 510 pG~w~~HCHil~H~d~GM~~~~~V~ 534 (553)
||.|.|||-+ |. ||...+.|+
T Consensus 112 ~G~y~y~C~~--H~--gM~G~I~V~ 132 (132)
T 3c75_A 112 AGSYDYFCTP--HP--FMRGKVIVE 132 (132)
T ss_dssp CEEEEEECSS--CT--TCEEEEEEC
T ss_pred CEEEEEEeCC--Cc--CCEEEEEEC
Confidence 9999999987 76 999999874
No 125
>2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B*
Probab=96.51 E-value=0.0094 Score=51.05 Aligned_cols=74 Identities=14% Similarity=0.241 Sum_probs=53.0
Q ss_pred CeEeecCCCEEEEEEEeCCCCCceeeeCCCcccCCCCCCCCCCccCCCCCCCCceEEEEEeCCCCcceEEecCh--hhhh
Q 008799 54 PTLHAREDDNVIVRVTNHVKYNVTIHWHGVRQLRTGWYDGPAYITQCPIQPGQSYVYNFTLTGQRGTLLWHAHI--SWLR 131 (553)
Q Consensus 54 P~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~pG~~~~y~~~~~~~~Gt~wYH~H~--~~~~ 131 (553)
..|.+..|++|+++++|.. .. |+..... -|. . .-+.||+..++.|+. +++|+|+|+|.. +...
T Consensus 60 ~~l~Vp~G~~V~~~vts~D-V~-----Hsf~ip~----~~~---k-~d~~PG~~~~~~~~~-~~~G~y~~~C~e~CG~~H 124 (135)
T 2cua_A 60 NPIEVPQGAEIVFKITSPD-VI-----HGFHVEG----TNI---N-VEVLPGEVSTVRYTF-KRPGEYRIICNQYCGLGH 124 (135)
T ss_dssp SSEEEETTSEEEEEEEBSS-SC-----EEEEETT----SSC---E-EEECBTBCEEEEEEC-CSCEEEEEECCSCCSTTS
T ss_pred CEEEEcCCCEEEEEEEeCC-cc-----ceEEecC----CCc---e-eEeCCCCcEEEEEEc-CCCEEEEEECcccCCCCc
Confidence 4899999999999999973 33 3333321 111 1 236789989999997 899999999953 1122
Q ss_pred ccceeeEEEcC
Q 008799 132 ATVHGAIVILP 142 (553)
Q Consensus 132 ~Gl~G~liV~~ 142 (553)
.+|.|-++|.+
T Consensus 125 ~~M~g~v~V~~ 135 (135)
T 2cua_A 125 QNMFGTIVVKE 135 (135)
T ss_dssp TTCEEEEEEEC
T ss_pred CCCEEEEEEEC
Confidence 68999998863
No 126
>3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ...
Probab=96.34 E-value=0.014 Score=51.70 Aligned_cols=74 Identities=15% Similarity=0.252 Sum_probs=54.3
Q ss_pred CeEeecCCCEEEEEEEeCCCCCceeeeCCCcccCCCCCCCCCCccCCCCCCCCceEEEEEeCCCCcceEEecCh-hhh-h
Q 008799 54 PTLHAREDDNVIVRVTNHVKYNVTIHWHGVRQLRTGWYDGPAYITQCPIQPGQSYVYNFTLTGQRGTLLWHAHI-SWL-R 131 (553)
Q Consensus 54 P~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~pG~~~~y~~~~~~~~Gt~wYH~H~-~~~-~ 131 (553)
..|.+..|++|++.++|. +..++. .++.. | +. .-+.||+..+..|.. +++|+|++.|.. .+. .
T Consensus 93 n~l~VP~G~~Vr~~vTS~-DViHsf-----~IP~l----g---ik-~da~PG~~n~~~~~~-~kpG~y~g~Cse~CG~~H 157 (168)
T 3s8f_B 93 NPIEVPQGAEIVFKITSP-DVIHGF-----HVEGT----N---IN-VEVLPGEVSTVRYTF-KRPGEYRIICNQYCGLGH 157 (168)
T ss_dssp SSEEEETTSEEEEEEECS-SSCEEE-----EETTS----S---CE-EEECTTBCEEEEEEC-CSCEEEEEECCSCCSTTG
T ss_pred CEEEEeCCCeEEEEEecC-CceEEE-----EECCC----C---eE-EEecCCceeEEEEEe-CCCEEEEEECCcCCCCCc
Confidence 589999999999999997 433333 32211 1 11 235689999999997 899999999983 333 3
Q ss_pred ccceeeEEEcC
Q 008799 132 ATVHGAIVILP 142 (553)
Q Consensus 132 ~Gl~G~liV~~ 142 (553)
++|.|-++|++
T Consensus 158 s~M~g~V~V~e 168 (168)
T 3s8f_B 158 QNMFGTIVVKE 168 (168)
T ss_dssp GGCEEEEEEEC
T ss_pred CCCEEEEEEeC
Confidence 89999999863
No 127
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=96.30 E-value=0.016 Score=60.84 Aligned_cols=78 Identities=15% Similarity=0.291 Sum_probs=60.2
Q ss_pred EEEecCCCEEEEEEEcCCCCCCCCCCeeecCCceEEEeeCCCCCCCCCCCCCCCCCCCCcceeeEecCCcEEEEEEEecC
Q 008799 430 LYRLAYNSTVQLVLQGTTVIAPENHPTHLHGFNFFAVGKGSGNFDPNKDPQKFNLVDPVERNTISVPTAGWTAIRFRADN 509 (553)
Q Consensus 430 ~~~~~~g~~v~~~i~n~~~~~~~~HP~HlHG~~f~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~adn 509 (553)
.+.++.|+.|+|++.|.....+..|.|.+.+... -+.+.||....+.|+++.
T Consensus 559 eI~VP~GdtVrfiLTN~D~veDViHSF~IPslGI----------------------------K~DaiPGrtnsvtFtadk 610 (638)
T 3sbq_A 559 EFTVKQGDEVTVTITNIDQIEDVSHGFVVVNHGV----------------------------SMEISPQQTSSITFVADK 610 (638)
T ss_dssp EEEEETTCEEEEEEEECCCSTTCCEEEEETTTTE----------------------------EEEECTTCEEEEEEECCS
T ss_pred EEEEecCceeEEEEecCCcCCCceeeeEecCCCc----------------------------eeeeCCCCeEEEEEEcCC
Confidence 4789999999999999532235677777765422 235778888999999999
Q ss_pred ceeeEEeecchhhH-hccceEEEEEeC
Q 008799 510 PGVWFLHCHLEVHT-SWGLKMAFVVDN 535 (553)
Q Consensus 510 pG~w~~HCHil~H~-d~GM~~~~~V~~ 535 (553)
||.|.+||...-|. ..+|...+.|++
T Consensus 611 PGvY~y~CSE~CGa~Hs~M~G~ViVEP 637 (638)
T 3sbq_A 611 PGLHWYYCSWFCHALHMEMVGRMMVEP 637 (638)
T ss_dssp CEEEEEECCSCCSTTCTTCEEEEEEEC
T ss_pred CEEEEEECCCcCCCCcccceEEEEEec
Confidence 99999999976554 358999999874
No 128
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A*
Probab=96.25 E-value=0.015 Score=48.85 Aligned_cols=37 Identities=16% Similarity=0.404 Sum_probs=29.7
Q ss_pred cCCcEEEEEEEecCceeeEEeecchhhHhccceEEEEEeCC
Q 008799 496 PTAGWTAIRFRADNPGVWFLHCHLEVHTSWGLKMAFVVDNG 536 (553)
Q Consensus 496 p~~g~~~irf~adnpG~w~~HCHil~H~d~GM~~~~~V~~~ 536 (553)
.+|....+. ++.||.|.|+|- .|...||.+.+.|.++
T Consensus 59 ~pG~t~~~t--F~~~G~y~y~C~--~H~~~gM~G~I~V~~~ 95 (123)
T 1paz_A 59 KINENYVLT--VTQPGAYLVKCT--PHYAMGMIALIAVGDS 95 (123)
T ss_dssp CTTCCEEEE--CCSCEEEEEECT--TTGGGTCEEEEEESSS
T ss_pred CCCCEEEEE--eCCCEEEEEEeC--CcccCCCEEEEEEcCC
Confidence 466654444 488999999997 5999999999999863
No 129
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1
Probab=96.06 E-value=0.016 Score=48.72 Aligned_cols=38 Identities=24% Similarity=0.438 Sum_probs=30.5
Q ss_pred ecCCcEEEEEEEecCceeeEEeecchhhHhccceEEEEEeCC
Q 008799 495 VPTAGWTAIRFRADNPGVWFLHCHLEVHTSWGLKMAFVVDNG 536 (553)
Q Consensus 495 vp~~g~~~irf~adnpG~w~~HCHil~H~d~GM~~~~~V~~~ 536 (553)
+.+|....+.| +.||.|.|+|- .|...||.+.+.|.++
T Consensus 58 ~~pG~t~~~tF--~~~G~y~y~C~--~H~~~gM~G~I~V~~~ 95 (123)
T 1pmy_A 58 TTVGQEAVVKF--DKEGVYGFKCA--PHYMMGMVALVVVGDK 95 (123)
T ss_dssp CCTTSCEEEEC--CSCEEEEEECS--TTTTTTCEEEEEESSC
T ss_pred cCCCCEEEEEe--CCCeEEEEEeC--CccccCCEEEEEEcCC
Confidence 34666555554 78999999997 5999999999999864
No 130
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae}
Probab=95.91 E-value=0.0099 Score=52.71 Aligned_cols=45 Identities=9% Similarity=0.107 Sum_probs=39.8
Q ss_pred cceeeEecCCcEEEEEEEec--CceeeEEeecchhhHhccceEEEEEe
Q 008799 489 ERNTISVPTAGWTAIRFRAD--NPGVWFLHCHLEVHTSWGLKMAFVVD 534 (553)
Q Consensus 489 ~rDTv~vp~~g~~~irf~ad--npG~w~~HCHil~H~d~GM~~~~~V~ 534 (553)
...+..|.+|+...|.|.++ .||.|-|+|-+--|.. ||-..|.|+
T Consensus 120 l~~t~~l~pGet~svtf~~~~lkpG~Y~f~Ct~PgH~~-gM~G~i~V~ 166 (167)
T 3ay2_A 120 VAHTKLIGGGEESSLTLDPAKLADGDYKFACTFPGHGA-LMNGKVTLV 166 (167)
T ss_dssp EEECCCBCTTCEEEEEECGGGGTTSCEEEECCSTTGGG-TSEEEEEEE
T ss_pred hccceeeCCCCEEEEEEecCCCCCcEEEEEcCCCCchh-cCEEEEEEe
Confidence 34566789999999999987 8999999999999998 899999886
No 131
>2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B*
Probab=95.84 E-value=0.037 Score=47.32 Aligned_cols=70 Identities=16% Similarity=0.309 Sum_probs=50.9
Q ss_pred EEecCCCEEEEEEEcCCCCCCCCCCeeecCCceEEEeeCCCCCCCCCCCCCCCCCCCCcceeeEecCCcEEEEEEEecCc
Q 008799 431 YRLAYNSTVQLVLQGTTVIAPENHPTHLHGFNFFAVGKGSGNFDPNKDPQKFNLVDPVERNTISVPTAGWTAIRFRADNP 510 (553)
Q Consensus 431 ~~~~~g~~v~~~i~n~~~~~~~~HP~HlHG~~f~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~adnp 510 (553)
+.++.|+.|+|++.|.. ..|. |.+-+.+ . -+.+.||....+.|+++.|
T Consensus 62 l~Vp~G~~V~~~vts~D----V~Hs-------f~ip~~~------------------~---k~d~~PG~~~~~~~~~~~~ 109 (135)
T 2cua_A 62 IEVPQGAEIVFKITSPD----VIHG-------FHVEGTN------------------I---NVEVLPGEVSTVRYTFKRP 109 (135)
T ss_dssp EEEETTSEEEEEEEBSS----SCEE-------EEETTSS------------------C---EEEECBTBCEEEEEECCSC
T ss_pred EEEcCCCEEEEEEEeCC----ccce-------EEecCCC------------------c---eeEeCCCCcEEEEEEcCCC
Confidence 68899999999998842 3343 3332111 0 1345677778899999999
Q ss_pred eeeEEeecc---hhhHhccceEEEEEe
Q 008799 511 GVWFLHCHL---EVHTSWGLKMAFVVD 534 (553)
Q Consensus 511 G~w~~HCHi---l~H~d~GM~~~~~V~ 534 (553)
|.|.++|.. ..| .+|-..++|.
T Consensus 110 G~y~~~C~e~CG~~H--~~M~g~v~V~ 134 (135)
T 2cua_A 110 GEYRIICNQYCGLGH--QNMFGTIVVK 134 (135)
T ss_dssp EEEEEECCSCCSTTS--TTCEEEEEEE
T ss_pred EEEEEECcccCCCCc--CCCEEEEEEE
Confidence 999999987 677 4898888875
No 132
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A
Probab=95.37 E-value=0.087 Score=44.57 Aligned_cols=44 Identities=14% Similarity=0.224 Sum_probs=39.2
Q ss_pred ceeeEecCCcEEEEEEEec---CceeeEEeecchhhHhccceEEEEEe
Q 008799 490 RNTISVPTAGWTAIRFRAD---NPGVWFLHCHLEVHTSWGLKMAFVVD 534 (553)
Q Consensus 490 rDTv~vp~~g~~~irf~ad---npG~w~~HCHil~H~d~GM~~~~~V~ 534 (553)
..+..|.||+...+.|.++ .||.|-|.|-+--|.. ||-..+.|+
T Consensus 82 ~~t~~l~pGet~svtf~~~~~~~~G~Y~f~C~~pgH~~-~M~G~i~V~ 128 (129)
T 1cuo_A 82 AFTPIIGGGEKTSVKFKVSALSKDEAYTYFCSYPGHFS-MMRGTLKLE 128 (129)
T ss_dssp EECCCBCTTCEEEEEEEGGGCCTTSCEEEECCSTTCTT-TSEEEEEEE
T ss_pred eeeeEECCCCEEEEEEeccccCCCceEEEEeCCCCchH-cCEEEEEEe
Confidence 3566789999999999997 8999999999999988 899999886
No 133
>2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A
Probab=95.13 E-value=0.058 Score=45.18 Aligned_cols=72 Identities=17% Similarity=0.261 Sum_probs=46.0
Q ss_pred EEEecCCCEEEEEEEcCCCCCCCCCCeeecCCceEEEeeCCCCCCCCCCCCCCCCCCCCcceeeEecCCcEEEEEEEecC
Q 008799 430 LYRLAYNSTVQLVLQGTTVIAPENHPTHLHGFNFFAVGKGSGNFDPNKDPQKFNLVDPVERNTISVPTAGWTAIRFRADN 509 (553)
Q Consensus 430 ~~~~~~g~~v~~~i~n~~~~~~~~HP~HlHG~~f~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~adn 509 (553)
.+.++.|++|.|+..+ ..|-+++.. + .+... .. .+.+.++....+.| +.
T Consensus 22 ~i~V~~GdtV~f~n~d------~~H~v~~~~--------~--~~p~~--~~-----------~~~~~~g~t~~~tF--~~ 70 (122)
T 2ux6_A 22 SLKVAPGDTVTFIPTD------KGHNVETIK--------G--MIPDG--AE-----------AFKSKINENYKVTF--TA 70 (122)
T ss_dssp EEEECTTEEEEEEESS------SSCCCEECT--------T--CSCTT--CC-----------CCBCCTTCCEEEEE--CS
T ss_pred EEEECCCCEEEEEECC------CCcEEEEcc--------c--ccCCC--cc-----------eeecCCCCEEEEEe--CC
Confidence 4688999999997432 146665543 1 11100 00 11234666655555 89
Q ss_pred ceeeEEeecchhhHhccceEEEEEeCC
Q 008799 510 PGVWFLHCHLEVHTSWGLKMAFVVDNG 536 (553)
Q Consensus 510 pG~w~~HCHil~H~d~GM~~~~~V~~~ 536 (553)
||.|.|+|-+ |.. |.+.+.|.+.
T Consensus 71 ~G~y~y~C~~--H~~--M~G~I~V~~~ 93 (122)
T 2ux6_A 71 PGVYGVKCTP--HPF--MVGVVQVGDA 93 (122)
T ss_dssp CEEEEEEETT--EEE--EEEEEEESSS
T ss_pred CEEEEEEeCC--Ccc--CEEEEEEeCC
Confidence 9999999987 766 9999999863
No 134
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C*
Probab=94.18 E-value=0.14 Score=43.12 Aligned_cols=44 Identities=16% Similarity=0.234 Sum_probs=38.7
Q ss_pred ceeeEecCCcEEEEEEEec--Ccee-eEEeecchhhHhccceEEEEEe
Q 008799 490 RNTISVPTAGWTAIRFRAD--NPGV-WFLHCHLEVHTSWGLKMAFVVD 534 (553)
Q Consensus 490 rDTv~vp~~g~~~irf~ad--npG~-w~~HCHil~H~d~GM~~~~~V~ 534 (553)
..|..|.||+...+.|.+. .+|. |-|.|-+--|.. ||-..+.|.
T Consensus 81 ~~t~~l~pGes~~vtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~ 127 (128)
T 2iaa_C 81 AHTSVIGGGETDSVTFDVSKLKEGEDYAFFCSFPGHWS-IMKGTIELG 127 (128)
T ss_dssp EECCCBCTTCEEEEEEESSCCCTTCCEEEECCSTTCTT-TSEEEEEEC
T ss_pred ccceeeCCCCEEEEEEeccccCCCceEEEEECCCChhH-CCEEEEEEe
Confidence 3566789999999999988 8995 999999999998 999999885
No 135
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A
Probab=94.18 E-value=0.093 Score=44.37 Aligned_cols=43 Identities=14% Similarity=0.234 Sum_probs=37.8
Q ss_pred eeeEecCCcEEEEEEEec--Ccee-eEEeecchhhHhccceEEEEEe
Q 008799 491 NTISVPTAGWTAIRFRAD--NPGV-WFLHCHLEVHTSWGLKMAFVVD 534 (553)
Q Consensus 491 DTv~vp~~g~~~irf~ad--npG~-w~~HCHil~H~d~GM~~~~~V~ 534 (553)
.+..|.||+...+.|.++ .||. |-|.|-+--|.. ||-..+.|.
T Consensus 83 ~t~~l~pGet~svtf~~~~l~~G~~Y~f~C~~pgH~~-gM~G~i~V~ 128 (129)
T 2ccw_A 83 HTKVIGGGESDSVTFDVSKIAAGENYAYFCSFPGHWA-MMKGTLKLG 128 (129)
T ss_dssp ECCCBCTTCEEEEEEEGGGSCTTCCEEEECCSTTGGG-TSEEEEEEC
T ss_pred eeeEECCCCEEEEEEeccccCCCceEEEEeCCCChhH-cCEEEEEEe
Confidence 456789999999999998 7865 999999999998 899999885
No 136
>3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ...
Probab=93.84 E-value=0.26 Score=43.57 Aligned_cols=72 Identities=15% Similarity=0.253 Sum_probs=53.4
Q ss_pred EEecCCCEEEEEEEcCCCCCCCCCCeeecCCceEEEeeCCCCCCCCCCCCCCCCCCCCcceeeEecCCcEEEEEEEecCc
Q 008799 431 YRLAYNSTVQLVLQGTTVIAPENHPTHLHGFNFFAVGKGSGNFDPNKDPQKFNLVDPVERNTISVPTAGWTAIRFRADNP 510 (553)
Q Consensus 431 ~~~~~g~~v~~~i~n~~~~~~~~HP~HlHG~~f~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~adnp 510 (553)
+.++.|+.|++.+.|. +..|.|-+=.... -+.+-||....+.|.++.|
T Consensus 95 l~VP~G~~Vr~~vTS~----DViHsf~IP~lgi----------------------------k~da~PG~~n~~~~~~~kp 142 (168)
T 3s8f_B 95 IEVPQGAEIVFKITSP----DVIHGFHVEGTNI----------------------------NVEVLPGEVSTVRYTFKRP 142 (168)
T ss_dssp EEEETTSEEEEEEECS----SSCEEEEETTSSC----------------------------EEEECTTBCEEEEEECCSC
T ss_pred EEEeCCCeEEEEEecC----CceEEEEECCCCe----------------------------EEEecCCceeEEEEEeCCC
Confidence 6789999999999984 3455554432111 2345577778899999999
Q ss_pred eeeEEeecc-hhhHhccceEEEEEe
Q 008799 511 GVWFLHCHL-EVHTSWGLKMAFVVD 534 (553)
Q Consensus 511 G~w~~HCHi-l~H~d~GM~~~~~V~ 534 (553)
|.|.+.|.. --+...+|...+.|+
T Consensus 143 G~y~g~Cse~CG~~Hs~M~g~V~V~ 167 (168)
T 3s8f_B 143 GEYRIICNQYCGLGHQNMFGTIVVK 167 (168)
T ss_dssp EEEEEECCSCCSTTGGGCEEEEEEE
T ss_pred EEEEEECCcCCCCCcCCCEEEEEEe
Confidence 999999985 445567899999886
No 137
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A
Probab=93.39 E-value=0.29 Score=41.20 Aligned_cols=44 Identities=16% Similarity=0.261 Sum_probs=38.0
Q ss_pred ceeeEecCCcEEEEEEEec--Ccee-eEEeecchhhHhccceEEEEEe
Q 008799 490 RNTISVPTAGWTAIRFRAD--NPGV-WFLHCHLEVHTSWGLKMAFVVD 534 (553)
Q Consensus 490 rDTv~vp~~g~~~irf~ad--npG~-w~~HCHil~H~d~GM~~~~~V~ 534 (553)
..|..|.||+...+.|.+. .||. |-|.|-+--|.. ||-..+.|+
T Consensus 82 ~~t~~l~pGet~svtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~ 128 (128)
T 1nwp_A 82 AHTKVIGAGEKDSVTFDVSKLAAGEKYGFFCSFPGHIS-MMKGTVTLK 128 (128)
T ss_dssp EECCCBCTTCEEEEEEEGGGSCTTSCEEEECCSTTCGG-GSEEEEEEC
T ss_pred eeeeeeCCCCEEEEEEeccccCCCceEEEEECCCChhH-CCEEEEEEC
Confidence 3455789999999999987 7876 999999999999 899998873
No 138
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ...
Probab=91.39 E-value=0.88 Score=37.89 Aligned_cols=95 Identities=11% Similarity=0.165 Sum_probs=57.3
Q ss_pred EEecC-CCEEEEEEEcCCCCCCCCCCeeecCCceEEEeeCCC-CCC-CC-CCCCCCCC----CCCCcceeeEecCCcEEE
Q 008799 431 YRLAY-NSTVQLVLQGTTVIAPENHPTHLHGFNFFAVGKGSG-NFD-PN-KDPQKFNL----VDPVERNTISVPTAGWTA 502 (553)
Q Consensus 431 ~~~~~-g~~v~~~i~n~~~~~~~~HP~HlHG~~f~Vl~~g~g-~~~-~~-~~~~~~~~----~~p~~rDTv~vp~~g~~~ 502 (553)
+.++. |+.|.++|.|.+.. |--.=||.|-+...+.- ... .. ......++ .......|..|.||....
T Consensus 20 i~V~~~Ge~V~~~l~N~G~~-----p~~~M~Hn~Vl~~~~~~~~~~~~~m~~~~~~~y~~~~d~~via~t~~l~pGes~~ 94 (125)
T 3fsa_A 20 ITVDKSCKQFTVNLSHPGNL-----PKNVMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDDSRVIAHTKLIGSGEKDS 94 (125)
T ss_dssp EEECTTCSEEEEEEECCSSC-----CHHHHCBCCEEEEHHHHHHHHHHHHHHCGGGTTSCTTCTTCCEECCCBCTTCEEE
T ss_pred EEEecCCCEEEEEEEECCcc-----cccccCceEEEcccchHHHHHHHHHhcChhhccCCCCCccceeccceeCCCcEEE
Confidence 67765 99999999997622 11111456644432100 000 00 00000011 112455677899999999
Q ss_pred EEEEec---CceeeEEeecchhhHhccceEEEEEe
Q 008799 503 IRFRAD---NPGVWFLHCHLEVHTSWGLKMAFVVD 534 (553)
Q Consensus 503 irf~ad---npG~w~~HCHil~H~d~GM~~~~~V~ 534 (553)
|.|.+. .+|.|-|-|- -|. ||-..+.|+
T Consensus 95 vtf~~~~l~~~G~y~f~C~--gH~--~M~G~v~V~ 125 (125)
T 3fsa_A 95 VTFDVSKLKEGEQYMFFCA--AHA--AMKGTLTLK 125 (125)
T ss_dssp EEEEGGGC---CCEEEECS--SST--TCEEEEEEC
T ss_pred EEEeCcCcCCCccEEEEcC--CCC--CcEEEEEEC
Confidence 999987 8999999999 888 999999874
No 139
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=84.53 E-value=8.1 Score=31.78 Aligned_cols=67 Identities=12% Similarity=0.233 Sum_probs=48.7
Q ss_pred EEEEEEEecCCCceEEEEEc-CceEEEEee--CCCccc--------ceEeeEEEeCCCccEEEEEEeCC--CCCeeEEEE
Q 008799 215 TYLLRIVNAAVNDELFFKIA-GHNLTVVEV--DSSYTK--------PFKTDTIFIGPGQTTNALLTADK--KIGKYLITI 281 (553)
Q Consensus 215 ~~rlRliN~~~~~~~~~~i~-gh~~~via~--DG~~~~--------p~~~d~~~l~pgeR~dv~v~~~~--~~g~~~i~~ 281 (553)
.+.|.+.|.+. ....+.+. |+.+.++-. +|..+- ........|.|||...+-...++ .||.|.+++
T Consensus 21 ~~~ltv~N~s~-~~v~l~f~Sgq~~Df~v~d~~G~~VwrwS~~~~FtQa~~~~tl~pGE~~~f~~~w~~~~~pG~Ytl~a 99 (120)
T 3isy_A 21 KFNMSLKNQSE-RAIEFQFSTGQKFELVVYDSEHKERYRYSKEKMFTQAFQNLTLESGETYDFSDVWKEVPEPGTYEVKV 99 (120)
T ss_dssp EEEEEEEECSS-SCEEEEESSSCCEEEEEECTTCCEEEETTTTCCCCCCCEEEEECTTCEEEEEEEESSCCCSEEEEEEE
T ss_pred EEEEEEEcCCC-CcEEEEeCCCCEEEEEEECCCCCEEEEccccchhhhhhceEEECCCCEEEEEEEeCCCCCCccEEEEE
Confidence 34688899985 45557776 676555554 476542 23568899999999999998884 479999987
Q ss_pred e
Q 008799 282 S 282 (553)
Q Consensus 282 ~ 282 (553)
.
T Consensus 100 ~ 100 (120)
T 3isy_A 100 T 100 (120)
T ss_dssp E
T ss_pred E
Confidence 5
No 140
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=82.07 E-value=11 Score=31.02 Aligned_cols=74 Identities=8% Similarity=0.107 Sum_probs=48.3
Q ss_pred eeEEEECCCCCCCeEeecCCCEEEEEEEeCCCCCceeeeCCCcccCCCCCCCCCC---ccCCCCCCCCceEEEEEeCC--
Q 008799 42 KSIVTVNGKFPGPTLHAREDDNVIVRVTNHVKYNVTIHWHGVRQLRTGWYDGPAY---ITQCPIQPGQSYVYNFTLTG-- 116 (553)
Q Consensus 42 ~~~~~~NG~~pGP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~~---~tq~~i~pG~~~~y~~~~~~-- 116 (553)
..+...|-+--.=+|+...|++..+.|.+...+ ..| .|+||-.+ +....|.||++.+|+...++
T Consensus 22 ~~ltv~N~s~~~v~l~f~Sgq~~Df~v~d~~G~---~Vw--------rwS~~~~FtQa~~~~tl~pGE~~~f~~~w~~~~ 90 (120)
T 3isy_A 22 FNMSLKNQSERAIEFQFSTGQKFELVVYDSEHK---ERY--------RYSKEKMFTQAFQNLTLESGETYDFSDVWKEVP 90 (120)
T ss_dssp EEEEEEECSSSCEEEEESSSCCEEEEEECTTCC---EEE--------ETTTTCCCCCCCEEEEECTTCEEEEEEEESSCC
T ss_pred EEEEEEcCCCCcEEEEeCCCCEEEEEEECCCCC---EEE--------EccccchhhhhhceEEECCCCEEEEEEEeCCCC
Confidence 344444544323478888888888888875331 222 35777544 22356899999999999952
Q ss_pred CCcceEEecC
Q 008799 117 QRGTLLWHAH 126 (553)
Q Consensus 117 ~~Gt~wYH~H 126 (553)
.+|+|..+.-
T Consensus 91 ~pG~Ytl~a~ 100 (120)
T 3isy_A 91 EPGTYEVKVT 100 (120)
T ss_dssp CSEEEEEEEE
T ss_pred CCccEEEEEE
Confidence 5899987753
No 141
>1cyx_A CYOA; electron transport; 2.30A {Escherichia coli} SCOP: b.6.1.2 PDB: 1cyw_A
Probab=70.92 E-value=19 Score=32.56 Aligned_cols=62 Identities=15% Similarity=0.126 Sum_probs=44.8
Q ss_pred eEEEEEcCCEEEEEEEecCCCceEEEEEcCceEEEEeeCCCcccceEeeEEEeCCCccEEEEEEeCCCCCeeEEEEeecc
Q 008799 206 FTLHVESGKTYLLRIVNAAVNDELFFKIAGHNLTVVEVDSSYTKPFKTDTIFIGPGQTTNALLTADKKIGKYLITISPFM 285 (553)
Q Consensus 206 ~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~~p~~~d~~~l~pgeR~dv~v~~~~~~g~~~i~~~~~~ 285 (553)
..+.+..|+.+||++-+.. ..+.|.|. ...-.+...||..-.+.+.+++ +|.|...|..++
T Consensus 41 n~l~lP~g~~V~~~lTS~D--ViHSF~IP----------------~lgvK~daiPGr~n~l~~~~~~-pG~y~g~CsE~C 101 (205)
T 1cyx_A 41 NEIAFPANTPVYFKVTSNS--VMHSFFIP----------------RLGSQIYAMAGMQTRLHLIANE-PGTYDGICAEIC 101 (205)
T ss_dssp SEEEEETTSCEEEEEEESS--SCEEEEEG----------------GGTEEEEECTTCCEEEEECCSS-SEEEEEEECSCC
T ss_pred ceEEEeCCCEEEEEEecCC--ceeeEEec----------------ccCcEEEecCCceEEEEEEeCC-CeEEEEEccccc
Confidence 3589999999999998763 34444444 3233455667888888888886 799999998665
Q ss_pred c
Q 008799 286 D 286 (553)
Q Consensus 286 ~ 286 (553)
.
T Consensus 102 G 102 (205)
T 1cyx_A 102 G 102 (205)
T ss_dssp S
T ss_pred c
Confidence 3
No 142
>2gsm_B Cytochrome C oxidase subunit 2; transmembrane protein complex, oxidoreductase; HET: DMU HEA TRD; 2.00A {Rhodobacter sphaeroides} SCOP: b.6.1.2 f.17.2.1 PDB: 3dtu_B* 3fye_B* 3fyi_B* 3omi_B* 3om3_B* 3oma_B* 3omn_B* 1m56_B* 1m57_B*
Probab=52.60 E-value=50 Score=31.07 Aligned_cols=62 Identities=15% Similarity=0.159 Sum_probs=44.9
Q ss_pred eEEEEEcCCEEEEEEEecCCCceEEEEEcCceEEEEeeCCCcccceEeeEEEeCCCccEEEEEEeCCCCCeeEEEEeecc
Q 008799 206 FTLHVESGKTYLLRIVNAAVNDELFFKIAGHNLTVVEVDSSYTKPFKTDTIFIGPGQTTNALLTADKKIGKYLITISPFM 285 (553)
Q Consensus 206 ~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~~p~~~d~~~l~pgeR~dv~v~~~~~~g~~~i~~~~~~ 285 (553)
..+.++.|+.+||++-+.. ..+.|.+.+. .-.+..-||..-.+.+.+++ ||.|...|..++
T Consensus 171 n~l~lP~g~~v~~~~tS~D--ViHsf~ip~l----------------~~k~da~PG~~n~~~~~~~~-~G~y~g~Cse~C 231 (262)
T 2gsm_B 171 TAMVVPVNKTVVVQVTGAD--VIHSWTVPAF----------------GVKQDAVPGRLAQLWFRAER-EGIFFGQCSELC 231 (262)
T ss_dssp SCEEEETTSEEEEEEEESS--SCEEEEEGGG----------------TEEEEECBTCCEEEEEECCS-CEEEEECCCSCC
T ss_pred ceEEEecCCEEEEEEEECc--ccceeeeccc----------------CceEEecCCceeEEEEecCC-cEEEEEEChHhc
Confidence 4599999999999998653 4444554432 33345667888888888887 799999998655
Q ss_pred c
Q 008799 286 D 286 (553)
Q Consensus 286 ~ 286 (553)
.
T Consensus 232 G 232 (262)
T 2gsm_B 232 G 232 (262)
T ss_dssp S
T ss_pred c
Confidence 3
No 143
>3hb3_B Cytochrome C oxidase subunit 2; electron transfer, proton transfer, proton pumping, membrane protein, cell inner membrane, cell membrane, copper; HET: HEA LDA LMT; 2.25A {Paracoccus denitrificans} PDB: 1ar1_B* 3ehb_B* 1qle_B*
Probab=51.33 E-value=52 Score=31.59 Aligned_cols=62 Identities=18% Similarity=0.171 Sum_probs=45.8
Q ss_pred eEEEEEcCCEEEEEEEecCCCceEEEEEcCceEEEEeeCCCcccceEeeEEEeCCCccEEEEEEeCCCCCeeEEEEeecc
Q 008799 206 FTLHVESGKTYLLRIVNAAVNDELFFKIAGHNLTVVEVDSSYTKPFKTDTIFIGPGQTTNALLTADKKIGKYLITISPFM 285 (553)
Q Consensus 206 ~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~~p~~~d~~~l~pgeR~dv~v~~~~~~g~~~i~~~~~~ 285 (553)
..+.+..|+.+||++-+.. ..|.|.+. ...-.+..-||..-.+.+.+++ ||.|..+|..++
T Consensus 189 N~lvlP~g~~V~~~ltS~D--ViHsf~iP----------------~lg~k~daiPG~~n~~~~~~~~-~G~y~g~CsE~C 249 (298)
T 3hb3_B 189 NPVVVPVGKKVLVQVTATD--VIHAWTIP----------------AFAVKQDAVPGRIAQLWFSVDQ-EGVYFGQCSELC 249 (298)
T ss_dssp SCEEEESSSEEEEEEEESS--SCEEEEEG----------------GGTEEEEECTTCCEEEEEECSS-SEEEEECCCSCC
T ss_pred ceEEEEcCCEEEEEEEeCC--ccceeeEc----------------ccCceEEecCCceEEEEEEeCC-CEEEEEEccccc
Confidence 5699999999999998754 34444444 3333455678888888888887 799999998654
Q ss_pred c
Q 008799 286 D 286 (553)
Q Consensus 286 ~ 286 (553)
.
T Consensus 250 G 250 (298)
T 3hb3_B 250 G 250 (298)
T ss_dssp S
T ss_pred C
Confidence 3
No 144
>3hb3_B Cytochrome C oxidase subunit 2; electron transfer, proton transfer, proton pumping, membrane protein, cell inner membrane, cell membrane, copper; HET: HEA LDA LMT; 2.25A {Paracoccus denitrificans} PDB: 1ar1_B* 3ehb_B* 1qle_B*
Probab=51.06 E-value=46 Score=31.98 Aligned_cols=75 Identities=13% Similarity=0.119 Sum_probs=51.7
Q ss_pred EEEecCCCEEEEEEEcCCCCCCCCCCeeecCCceEEEeeCCCCCCCCCCCCCCCCCCCCcceeeEecCCcEEEEEEEecC
Q 008799 430 LYRLAYNSTVQLVLQGTTVIAPENHPTHLHGFNFFAVGKGSGNFDPNKDPQKFNLVDPVERNTISVPTAGWTAIRFRADN 509 (553)
Q Consensus 430 ~~~~~~g~~v~~~i~n~~~~~~~~HP~HlHG~~f~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~adn 509 (553)
-+.++.|+.|++.+.+. +..|.|.+=. -+ . -+.+-||....+.|.++.
T Consensus 190 ~lvlP~g~~V~~~ltS~----DViHsf~iP~-------lg------------------~---k~daiPG~~n~~~~~~~~ 237 (298)
T 3hb3_B 190 PVVVPVGKKVLVQVTAT----DVIHAWTIPA-------FA------------------V---KQDAVPGRIAQLWFSVDQ 237 (298)
T ss_dssp CEEEESSSEEEEEEEES----SSCEEEEEGG-------GT------------------E---EEEECTTCCEEEEEECSS
T ss_pred eEEEEcCCEEEEEEEeC----CccceeeEcc-------cC------------------c---eEEecCCceEEEEEEeCC
Confidence 47889999999999884 3455555432 22 0 123346677789999999
Q ss_pred ceeeEEeecchhh-HhccceEEEEEeCC
Q 008799 510 PGVWFLHCHLEVH-TSWGLKMAFVVDNG 536 (553)
Q Consensus 510 pG~w~~HCHil~H-~d~GM~~~~~V~~~ 536 (553)
||.|...|.-.-- -...|-..++|.+.
T Consensus 238 ~G~y~g~CsE~CG~~Hs~M~~~v~vvs~ 265 (298)
T 3hb3_B 238 EGVYFGQCSELCGINHAYMPIVVKAVSQ 265 (298)
T ss_dssp SEEEEECCCSCCSTTTTSCCEEEEEECH
T ss_pred CEEEEEEcccccCcCccCCeeEEEEEcH
Confidence 9999999986533 34567777776643
No 145
>2r39_A FIXG-related protein; structural GE PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, iron, iron-sulfur; 2.02A {Vibrio parahaemolyticus}
Probab=46.44 E-value=45 Score=26.97 Aligned_cols=46 Identities=24% Similarity=0.406 Sum_probs=30.5
Q ss_pred EEEEEEEecCCCc-eEEEEEcCc-eEEEEeeCCCcccceEeeEEEeCCCccEEEEEEe
Q 008799 215 TYLLRIVNAAVND-ELFFKIAGH-NLTVVEVDSSYTKPFKTDTIFIGPGQTTNALLTA 270 (553)
Q Consensus 215 ~~rlRliN~~~~~-~~~~~i~gh-~~~via~DG~~~~p~~~d~~~l~pgeR~dv~v~~ 270 (553)
.|+|+|+|.+... .+.|++.|. .+++. | +. .+.|.||+..++-|..
T Consensus 34 ~Ytlki~Nkt~~~~~~~l~v~g~~~l~~~---g----~~---~i~v~~g~~~~~~v~v 81 (118)
T 2r39_A 34 TYTLKVINKTQQVQEYNLDVKGLNDVSWY---G----KQ---TIQVEPGEVLNLPMSL 81 (118)
T ss_dssp EEEEEEEECSSSCEEEEEEEESCSSCEEE---S----CC---EEEECTTCEEEEEEEE
T ss_pred EEEEEEEECCCCCEEEEEEEeCCcccEEe---C----CC---cEEECCCCEEEEEEEE
Confidence 6999999999665 556666653 23332 1 21 4999999977765554
No 146
>1cyx_A CYOA; electron transport; 2.30A {Escherichia coli} SCOP: b.6.1.2 PDB: 1cyw_A
Probab=42.61 E-value=50 Score=29.74 Aligned_cols=73 Identities=19% Similarity=0.206 Sum_probs=50.2
Q ss_pred EEEecCCCEEEEEEEcCCCCCCCCCCeeecCCceEEEeeCCCCCCCCCCCCCCCCCCCCcceeeEecCCcEEEEEEEecC
Q 008799 430 LYRLAYNSTVQLVLQGTTVIAPENHPTHLHGFNFFAVGKGSGNFDPNKDPQKFNLVDPVERNTISVPTAGWTAIRFRADN 509 (553)
Q Consensus 430 ~~~~~~g~~v~~~i~n~~~~~~~~HP~HlHG~~f~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~adn 509 (553)
-+.++.|+.|++.|.+. +..|.| +|-+.+. -+.+-||-...+.|.++.
T Consensus 42 ~l~lP~g~~V~~~lTS~----DViHSF-------~IP~lgv---------------------K~daiPGr~n~l~~~~~~ 89 (205)
T 1cyx_A 42 EIAFPANTPVYFKVTSN----SVMHSF-------FIPRLGS---------------------QIYAMAGMQTRLHLIANE 89 (205)
T ss_dssp EEEEETTSCEEEEEEES----SSCEEE-------EEGGGTE---------------------EEEECTTCCEEEEECCSS
T ss_pred eEEEeCCCEEEEEEecC----CceeeE-------EecccCc---------------------EEEecCCceEEEEEEeCC
Confidence 47889999999999874 344444 4433320 123446777888999999
Q ss_pred ceeeEEeecchhhHh-ccceEEEEEe
Q 008799 510 PGVWFLHCHLEVHTS-WGLKMAFVVD 534 (553)
Q Consensus 510 pG~w~~HCHil~H~d-~GM~~~~~V~ 534 (553)
||.|...|-..-... ..|-..++|.
T Consensus 90 pG~y~g~CsE~CG~~Hs~M~~~v~vv 115 (205)
T 1cyx_A 90 PGTYDGICAEICGPGHSGMKFKAIAT 115 (205)
T ss_dssp SEEEEEEECSCCSTTSTTCCEEEEEE
T ss_pred CeEEEEEcccccccchhhceEEEEEE
Confidence 999999998765443 3455666665
No 147
>1xwv_A DER F II; beta sheets, allergen; HET: PE3 XPE; 1.83A {Dermatophagoides farinae} SCOP: b.1.18.7 PDB: 1ahk_A 1ahm_A 1wrf_A 2f08_A* 1a9v_A 1ktj_A
Probab=39.65 E-value=42 Score=27.73 Aligned_cols=60 Identities=13% Similarity=0.155 Sum_probs=34.2
Q ss_pred CeEeecCCCEEEEEEEe---CCCCCc--eee--eCCCcccC-CCCCCCCCCccCCCCCCCCceEEEEEe
Q 008799 54 PTLHAREDDNVIVRVTN---HVKYNV--TIH--WHGVRQLR-TGWYDGPAYITQCPIQPGQSYVYNFTL 114 (553)
Q Consensus 54 P~i~v~~Gd~v~v~l~N---~l~~~~--~iH--~HG~~~~~-~~~~DGv~~~tq~~i~pG~~~~y~~~~ 114 (553)
+.=.+.+|+.+.|.+.= ...... .+| ..|+..+- ....|+=-+ +.|||.+|+.++|.+.+
T Consensus 25 ~pC~l~rG~~~~i~~~f~~~~~~~~l~~~v~~~~~g~~ip~p~~~~daC~~-~~CPl~~G~~~~y~~~~ 92 (129)
T 1xwv_A 25 DPCIIHRGKPFTLEALFDANQNTKTAKIEIKASLDGLEIDVPGIDTNACHF-MKCPLVKGQQYDAKYTW 92 (129)
T ss_dssp SCEEEETTSEEEEEEEEECCSCBSCCEEEEEEEETTEEECCCSCCCBGGGT-SCSSBCTTCEEEEEEEE
T ss_pred CCCEEeCCCeEEEEEEEECCCccceEEEEEEEEEcCEEeecCCCCCCccCC-ccCcccCCEEEEEEEEe
Confidence 45567788888777762 222222 222 23444332 111343212 46999999999999876
No 148
>2gsm_B Cytochrome C oxidase subunit 2; transmembrane protein complex, oxidoreductase; HET: DMU HEA TRD; 2.00A {Rhodobacter sphaeroides} SCOP: b.6.1.2 f.17.2.1 PDB: 3dtu_B* 3fye_B* 3fyi_B* 3omi_B* 3om3_B* 3oma_B* 3omn_B* 1m56_B* 1m57_B*
Probab=39.45 E-value=83 Score=29.52 Aligned_cols=74 Identities=19% Similarity=0.266 Sum_probs=50.0
Q ss_pred EEEecCCCEEEEEEEcCCCCCCCCCCeeecCCceEEEeeCCCCCCCCCCCCCCCCCCCCcceeeEecCCcEEEEEEEecC
Q 008799 430 LYRLAYNSTVQLVLQGTTVIAPENHPTHLHGFNFFAVGKGSGNFDPNKDPQKFNLVDPVERNTISVPTAGWTAIRFRADN 509 (553)
Q Consensus 430 ~~~~~~g~~v~~~i~n~~~~~~~~HP~HlHG~~f~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~adn 509 (553)
.+.++.|+.|++.+.+. +..|.|-+= +-| ...| +-||....+.|.++.
T Consensus 172 ~l~lP~g~~v~~~~tS~----DViHsf~ip-------~l~------------------~k~d---a~PG~~n~~~~~~~~ 219 (262)
T 2gsm_B 172 AMVVPVNKTVVVQVTGA----DVIHSWTVP-------AFG------------------VKQD---AVPGRLAQLWFRAER 219 (262)
T ss_dssp CEEEETTSEEEEEEEES----SSCEEEEEG-------GGT------------------EEEE---ECBTCCEEEEEECCS
T ss_pred eEEEecCCEEEEEEEEC----cccceeeec-------ccC------------------ceEE---ecCCceeEEEEecCC
Confidence 47889999999999874 344555443 222 1122 335666788999999
Q ss_pred ceeeEEeecchhhH-hccceEEEEEeC
Q 008799 510 PGVWFLHCHLEVHT-SWGLKMAFVVDN 535 (553)
Q Consensus 510 pG~w~~HCHil~H~-d~GM~~~~~V~~ 535 (553)
||.|...|--.--. ...|-..++|.+
T Consensus 220 ~G~y~g~Cse~CG~~H~~M~~~v~vv~ 246 (262)
T 2gsm_B 220 EGIFFGQCSELCGISHAYMPITVKVVS 246 (262)
T ss_dssp CEEEEECCCSCCSTTGGGCCEEEEEEC
T ss_pred cEEEEEEChHhcccCcccCeEEEEEEc
Confidence 99999999865433 345666666654
No 149
>1v54_B Cytochrome C oxidase polypeptide II; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} SCOP: b.6.1.2 f.17.2.1 PDB: 1oco_B* 1occ_B* 1ocz_B* 1ocr_B* 1v55_B* 2dyr_B* 2dys_B* 2eij_B* 2eik_B* 2eil_B* 2eim_B* 2ein_B* 2occ_B* 2y69_B* 2ybb_M* 2zxw_B* 3abk_B* 3abl_B* 3abm_B* 3ag1_B* ...
Probab=35.75 E-value=97 Score=28.36 Aligned_cols=62 Identities=11% Similarity=0.011 Sum_probs=43.4
Q ss_pred eEEEEEcCCEEEEEEEecCCCceEEEEEcCceEEEEeeCCCcccceEeeEEEeCCCccEEEEEEeCCCCCeeEEEEeecc
Q 008799 206 FTLHVESGKTYLLRIVNAAVNDELFFKIAGHNLTVVEVDSSYTKPFKTDTIFIGPGQTTNALLTADKKIGKYLITISPFM 285 (553)
Q Consensus 206 ~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~~p~~~d~~~l~pgeR~dv~v~~~~~~g~~~i~~~~~~ 285 (553)
..+.+..|+.+|+++-.+- ..|.+.+. ...-.+..-||..-.+-+.+++ ||.|...|..++
T Consensus 140 n~lvlP~~~~Vr~~vtS~D--ViHsf~vP----------------~lg~K~DaiPGr~n~~~~~~~~-~G~y~g~Cse~C 200 (227)
T 1v54_B 140 NRVVLPMEMTIRMLVSSED--VLHSWAVP----------------SLGLKTDAIPGRLNQTTLMSSR-PGLYYGQCSEIC 200 (227)
T ss_dssp SCEEEETTSCEEEEEEESS--SCEEEEEG----------------GGTEEEEECTTCCEEEEECCSS-CEEEEECCCSCC
T ss_pred ceEEEecCCEEEEEEEeCc--ccceeeec----------------ccCcEEEecCCceEEEEEecCC-cEEEEEEehhhc
Confidence 5689999999999887643 44445444 3333345567777777777776 799999998654
Q ss_pred c
Q 008799 286 D 286 (553)
Q Consensus 286 ~ 286 (553)
.
T Consensus 201 G 201 (227)
T 1v54_B 201 G 201 (227)
T ss_dssp S
T ss_pred c
Confidence 3
No 150
>2c34_A ICP, inhibitor of cysteine peptidases; chagasin, immunoglobulin fold; NMR {Leishmania mexicana} SCOP: b.1.26.1
Probab=33.63 E-value=1.8e+02 Score=23.26 Aligned_cols=68 Identities=10% Similarity=0.008 Sum_probs=37.8
Q ss_pred CCeEeecCCCEEEEEEEeCCCCCceeeeCCCcccCCCCCCCCC----Cc----cCCCCCCCCceEEEEEeCCCCcce
Q 008799 53 GPTLHAREDDNVIVRVTNHVKYNVTIHWHGVRQLRTGWYDGPA----YI----TQCPIQPGQSYVYNFTLTGQRGTL 121 (553)
Q Consensus 53 GP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv~----~~----tq~~i~pG~~~~y~~~~~~~~Gt~ 121 (553)
|-+|.++.||++.|.|.-+-.-...-......-...--.+|.- .. ....+..|.+..+.|++ ..+|+.
T Consensus 14 ~~~i~~~~Ge~~~I~L~~NPtTGY~W~~~~~~~~~~l~~~gl~~~s~y~~~~~~~~~vG~gG~~~~~f~a-~~~G~~ 89 (116)
T 2c34_A 14 DKWVDTHVGKTTEIHLKGNPTTGYMWTRVGFVGKDVLSDEILEVVCKYTPTPSSTPMVGVGGIYVVLVKP-RKRGHH 89 (116)
T ss_dssp CCCEEECSSCCEEEEEECCTTSSCEEEETTCTTSSCCCCSSEEEEEEEECCCCSSSSSCCCCEEEEEEEE-CSSSSE
T ss_pred CcEEEEcCCCEEEEEeCCCCCCCcEEEEecCCCcccccccccEEEEeEEeCCCCCCCcCCCceEEEEEEE-eCCceE
Confidence 4589999999999999976654444433321100000011100 00 01235667888899998 667763
No 151
>1yew_A Particulate methane monooxygenase, B subunit; membrane protein, beta barrel, oxidoreductase; 2.80A {Methylococcus capsulatus} PDB: 3rgb_A
Probab=31.77 E-value=89 Score=30.59 Aligned_cols=77 Identities=18% Similarity=0.244 Sum_probs=0.0
Q ss_pred EEEEEEEEEeecccceeeE---EEECCCCCCCeEeecCCCEEEEEEEeCCCCCceeeeC-------CCcccCCCCCCCCC
Q 008799 26 YNFTVVMTNMTKLCASKSI---VTVNGKFPGPTLHAREDDNVIVRVTNHVKYNVTIHWH-------GVRQLRTGWYDGPA 95 (553)
Q Consensus 26 ~~l~~~~~~~~~~g~~~~~---~~~NG~~pGP~i~v~~Gd~v~v~l~N~l~~~~~iH~H-------G~~~~~~~~~DGv~ 95 (553)
.+..++..+....|+...+ ++=||.-| +++.+=.+-.||+.|..-....--.- |+.+++.
T Consensus 250 V~~~v~~A~Y~vpgR~l~~~~~VtN~g~~p---vrlgeF~tA~vrFln~~~~~~~~~~P~~lla~~gL~vsd~------- 319 (382)
T 1yew_A 250 VSVKVEDATYRVPGRAMRMKLTITNHGNSP---IRLGEFYTASVRFLDSDVYKDTTGYPEDLLAEDGLSVSDN------- 319 (382)
T ss_dssp EEEEEEEEEEESSCSEEEEEEEEEECSSSC---EEEEEEECSSCEEECTTTCCCCSCCCGGGEETTCEEESCC-------
T ss_pred eEEEeeccEEecCCcEEEEEEEEEcCCCCc---eEeeeEEeccEEEeCCcccccCCCChHHhhccCCceeCCC-------
Q ss_pred CccCCCCCCCCceEEEEEeCC
Q 008799 96 YITQCPIQPGQSYVYNFTLTG 116 (553)
Q Consensus 96 ~~tq~~i~pG~~~~y~~~~~~ 116 (553)
.||+|||+.+.+.++.+
T Consensus 320 ----~pI~PGETr~~~v~a~d 336 (382)
T 1yew_A 320 ----SPLAPGETRTVDVTASD 336 (382)
T ss_dssp ----SCBCTTCEEEEEEEEEC
T ss_pred ----CCcCCCceeEEEEEeeh
No 152
>1nep_A EPV20, BNPC2, epididymal secretory protein E1; niemann-PICK C2, LDL, cholesterol, lipid bindin; HET: NAG; 1.70A {Bos taurus} SCOP: b.1.18.7 PDB: 2hka_A*
Probab=31.12 E-value=59 Score=26.80 Aligned_cols=61 Identities=21% Similarity=0.200 Sum_probs=34.2
Q ss_pred CeEeecCCCEEEEEEE---eCCCCCceeee----CCCcccC-CCCCCCCCCccCCCCCCCCceEEEEEe
Q 008799 54 PTLHAREDDNVIVRVT---NHVKYNVTIHW----HGVRQLR-TGWYDGPAYITQCPIQPGQSYVYNFTL 114 (553)
Q Consensus 54 P~i~v~~Gd~v~v~l~---N~l~~~~~iH~----HG~~~~~-~~~~DGv~~~tq~~i~pG~~~~y~~~~ 114 (553)
+.=.+.+|+.+.|.+. |.......... .|+..+- .+..|+=..-+.|||.+|+.++|.+.+
T Consensus 26 ~PC~l~rG~~~~i~i~f~~~~~~~~~~~~v~~~~~gv~vp~~~~~~daC~~g~~CPl~~G~~~~y~~~l 94 (130)
T 1nep_A 26 QPCKLHRGQSYSVNVTFTSNTQSQSSKAVVHGIVMGIPVPFPIPESDGCKSGIRCPIEKDKTYNYVNKL 94 (130)
T ss_dssp SSEEEETTCEEEEEEEEEESSCBSCCEEEEEEEETTEEEECCCSCCBGGGTTCCSSBCTTCEEEEEEEE
T ss_pred CCCEEEcCCeEEEEEEEEcccccceEEEEEEEEECCEEeeccCCCCCcccCCCcCcccCCcEEEEEEEe
Confidence 4466778888777776 22222222222 3444321 111344211135999999999999877
No 153
>2p9r_A Alpha-2-M, alpha-2-macroglobulin; human alpha2-macroglobulin, Mg2 domain, X-RAY, signaling protein; 2.30A {Homo sapiens}
Probab=27.34 E-value=1.6e+02 Score=22.57 Aligned_cols=67 Identities=13% Similarity=0.145 Sum_probs=36.1
Q ss_pred EEcCCEEEEEEEecCCCceEEEEEcC--ceEEEEeeCCCcccceEeeEEEeCCCccEEEEEEeCCC--CCeeEEEEe
Q 008799 210 VESGKTYLLRIVNAAVNDELFFKIAG--HNLTVVEVDSSYTKPFKTDTIFIGPGQTTNALLTADKK--IGKYLITIS 282 (553)
Q Consensus 210 v~~G~~~rlRliN~~~~~~~~~~i~g--h~~~via~DG~~~~p~~~d~~~l~pgeR~dv~v~~~~~--~g~~~i~~~ 282 (553)
-++|+++++|++-....... ..+ -.+++...+|..+.- -.........++..+..+.. .|.|.|++.
T Consensus 13 YrPGetV~~~~~~~~~~~~p---~~~~~~~v~l~dp~g~~v~~---~~~~~~~~G~~~~~f~Lp~~~~~G~y~i~~~ 83 (102)
T 2p9r_A 13 YKPGQTVKFRVVSMDENFHP---LNELIPLVYIQDPKGNRIAQ---WQSFQLEGGLKQFSFPLSSEPFQGSYKVVVQ 83 (102)
T ss_dssp ECTTCEEEEEEEEECGGGCB---CCCEEEEEEEECTTSCEEEE---EEEEECBTTEEEEEEECCSSCCCEEEEEEEE
T ss_pred cCCCCEEEEEEEEECCCCcC---CCCCceEEEEECCCCCEEEE---EEeecCCCCEEEEEEECCCCCCCeeEEEEEE
Confidence 58999999998755322111 111 134555555553321 11222234456666666553 389999876
No 154
>2h7w_A Chagasin; beta-strands, immunoglobulin-fold, hydrolase inhibitor; 1.70A {Trypanosoma cruzi} SCOP: b.1.26.1 PDB: 2nnr_A 2oul_B 3cbj_B 3cbk_B 3e1z_A 2fo8_A 2nqd_A*
Probab=27.09 E-value=2.6e+02 Score=22.96 Aligned_cols=65 Identities=14% Similarity=0.133 Sum_probs=36.4
Q ss_pred CCeEeecCCCEEEEEEEeCCCCCceeeeCCCcccCCCCCCCC--------CCccCCCCCCCCceEEEEEeCCCCcce
Q 008799 53 GPTLHAREDDNVIVRVTNHVKYNVTIHWHGVRQLRTGWYDGP--------AYITQCPIQPGQSYVYNFTLTGQRGTL 121 (553)
Q Consensus 53 GP~i~v~~Gd~v~v~l~N~l~~~~~iH~HG~~~~~~~~~DGv--------~~~tq~~i~pG~~~~y~~~~~~~~Gt~ 121 (553)
|-+|.++.||++.|.|.-+-.-..+-......- ..-.|++ |.- ...+..|.+..+.|++ ..+|+.
T Consensus 32 ~~~I~v~~Ge~~~I~L~~NPTTGY~W~~~~~~~--~~L~~~~~~v~~~y~p~~-~~~vGagG~~~w~f~A-~~~G~~ 104 (131)
T 2h7w_A 32 GATLTVAVGELVEIQLPSNPTTGFAWYFEGGTK--ESPNESMFTVENKYFPPD-SKLLGAGGTEHFHVTV-KAAGTH 104 (131)
T ss_dssp TCEEEECTTCEEEEEEEECGGGSCEEEBTTTBS--SCSCTTTEEEEEEEECCT-TCCTTCCEEEEEEEEE-CSSEEE
T ss_pred CCEEEEeCCCEEEEEeCCCCCCCeEEEEecCCC--ccccccceeecceeeeCC-CCCcCCCcEEEEEEEE-ccCceE
Confidence 568999999999999987654333322221110 0001221 100 1135567778888887 567753
No 155
>2hj1_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; 2.10A {Haemophilus influenzae} SCOP: d.15.3.4
Probab=25.59 E-value=33 Score=26.93 Aligned_cols=24 Identities=13% Similarity=0.062 Sum_probs=21.1
Q ss_pred eEEEECCCCCCCeEeecCCCEEEE
Q 008799 43 SIVTVNGKFPGPTLHAREDDNVIV 66 (553)
Q Consensus 43 ~~~~~NG~~pGP~i~v~~Gd~v~v 66 (553)
..+.+||+.-.+.-.+++||+|+|
T Consensus 59 ~~V~Vng~~v~~d~~L~dGDRVEI 82 (97)
T 2hj1_A 59 NKIGIFSRPIKLTDVLKEGDRIEI 82 (97)
T ss_dssp SEEEEEECSCCTTCBCCTTCEEEE
T ss_pred cEEEEcCEECCCCccCCCCCEEEE
Confidence 468999998778888999999987
No 156
>1fft_B Ubiquinol oxidase; electron transport, cytochrome oxidase, membrane protein, oxidoreductase; HET: HEM HEO; 3.50A {Escherichia coli} SCOP: b.6.1.2 f.17.2.1
Probab=25.00 E-value=64 Score=31.22 Aligned_cols=61 Identities=15% Similarity=0.141 Sum_probs=43.7
Q ss_pred eEEEEEcCCEEEEEEEecCCCceEEEEEcCceEEEEeeCCCcccceEeeEEEeCCCccEEEEEEeCCCCCeeEEEEeecc
Q 008799 206 FTLHVESGKTYLLRIVNAAVNDELFFKIAGHNLTVVEVDSSYTKPFKTDTIFIGPGQTTNALLTADKKIGKYLITISPFM 285 (553)
Q Consensus 206 ~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~~p~~~d~~~l~pgeR~dv~v~~~~~~g~~~i~~~~~~ 285 (553)
..+.+..|+.+||++-.. ...+.|.+. ...-.+..-||..-.+.+.+++ ||.|...|..++
T Consensus 151 n~l~lP~g~~V~~~lTS~--DViHsf~IP----------------~lg~k~DaiPGr~n~~~~~~~~-~G~y~g~CsE~C 211 (315)
T 1fft_B 151 NEIAFPANTPVYFKVTSN--SVMNSFFIP----------------RLGSQIYAMAGMQTRLHLIANE-PGTYDGISASYS 211 (315)
T ss_dssp SBCCCCSSSEEEEEECBS--SSCEEEEEG----------------GGTEEEEECBTSCEEEEEECCS-CBCCEEBCCSCC
T ss_pred ceEEEeCCCEEEEEEEeC--Cccceeeec----------------ccCcEEeecCCcceeeEEecCC-CeEEEEeccccc
Confidence 457889999999988644 344444443 3333456678888888888887 799999998654
No 157
>2x3c_A Toxic extracellular endopeptidase; hydrolase; 1.99A {Aeromonas salmonicida subsp} PDB: 2x3a_A 2x3b_A
Probab=24.43 E-value=1.4e+02 Score=29.27 Aligned_cols=15 Identities=20% Similarity=0.233 Sum_probs=13.2
Q ss_pred CCCCCCCceEEEEEe
Q 008799 100 CPIQPGQSYVYNFTL 114 (553)
Q Consensus 100 ~~i~pG~~~~y~~~~ 114 (553)
..|+||++.+.+|++
T Consensus 95 ~~L~pG~Sve~~~dl 109 (343)
T 2x3c_A 95 QLLKAGQSLTVQAEV 109 (343)
T ss_dssp EEECTTCEEEEEEEC
T ss_pred EEeCCCCeEEEEEeh
Confidence 348999999999998
No 158
>1v54_B Cytochrome C oxidase polypeptide II; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} SCOP: b.6.1.2 f.17.2.1 PDB: 1oco_B* 1occ_B* 1ocz_B* 1ocr_B* 1v55_B* 2dyr_B* 2dys_B* 2eij_B* 2eik_B* 2eil_B* 2eim_B* 2ein_B* 2occ_B* 2y69_B* 2ybb_M* 2zxw_B* 3abk_B* 3abl_B* 3abm_B* 3ag1_B* ...
Probab=23.63 E-value=1.3e+02 Score=27.40 Aligned_cols=75 Identities=9% Similarity=0.184 Sum_probs=49.7
Q ss_pred eEEEecCCCEEEEEEEcCCCCCCCCCCeeecCCceEEEeeCCCCCCCCCCCCCCCCCCCCcceeeEecCCcEEEEEEEec
Q 008799 429 RLYRLAYNSTVQLVLQGTTVIAPENHPTHLHGFNFFAVGKGSGNFDPNKDPQKFNLVDPVERNTISVPTAGWTAIRFRAD 508 (553)
Q Consensus 429 ~~~~~~~g~~v~~~i~n~~~~~~~~HP~HlHG~~f~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~ad 508 (553)
+.+.++.|+.|++.+.+. +..|.|-+= +-| ...| .-||-.-.+.|.++
T Consensus 140 n~lvlP~~~~Vr~~vtS~----DViHsf~vP-------~lg------------------~K~D---aiPGr~n~~~~~~~ 187 (227)
T 1v54_B 140 NRVVLPMEMTIRMLVSSE----DVLHSWAVP-------SLG------------------LKTD---AIPGRLNQTTLMSS 187 (227)
T ss_dssp SCEEEETTSCEEEEEEES----SSCEEEEEG-------GGT------------------EEEE---ECTTCCEEEEECCS
T ss_pred ceEEEecCCEEEEEEEeC----cccceeeec-------ccC------------------cEEE---ecCCceEEEEEecC
Confidence 347889999999999874 444555443 222 1122 33566677889999
Q ss_pred CceeeEEeecchhhHh-ccceEEEEEeC
Q 008799 509 NPGVWFLHCHLEVHTS-WGLKMAFVVDN 535 (553)
Q Consensus 509 npG~w~~HCHil~H~d-~GM~~~~~V~~ 535 (553)
.||.|...|.-.-... .-|-..++|.+
T Consensus 188 ~~G~y~g~Cse~CG~~Hs~M~~~v~vv~ 215 (227)
T 1v54_B 188 RPGLYYGQCSEICGSNHSFMPIVLELVP 215 (227)
T ss_dssp SCEEEEECCCSCCSTTGGGCCEEEEEEC
T ss_pred CcEEEEEEehhhcccccccCeEEEEEEc
Confidence 9999999998654443 34555666653
No 159
>1x9u_A Umecyanin; cupredoxin, phytocyanin, copper binding site, beta barrel, electron transport; 1.80A {Armoracia rusticana} PDB: 1x9r_A
Probab=23.13 E-value=75 Score=25.70 Aligned_cols=34 Identities=24% Similarity=0.450 Sum_probs=28.0
Q ss_pred EEEecCceeeEEeecchhhHhccceEEE-EEeCCC
Q 008799 504 RFRADNPGVWFLHCHLEVHTSWGLKMAF-VVDNGK 537 (553)
Q Consensus 504 rf~adnpG~w~~HCHil~H~d~GM~~~~-~V~~~~ 537 (553)
++..+.+|.+-|=|=...|=..||-+.+ .|....
T Consensus 73 ~v~l~~~G~~yFic~~~~HC~~Gmkl~In~V~~~~ 107 (116)
T 1x9u_A 73 KIMLNTTGPQYYICTVGDHCRVGQKLSINVVGAGG 107 (116)
T ss_dssp EEECCSCEEEEEECCSTTTTTTTCEEEEEEECC--
T ss_pred EEEECCCCCEEEECCCCCccccCCEEEEEEECCCC
Confidence 4556889999999999999999999999 887543
No 160
>2wtp_A ORF131 protein, CZCE; metal binding protein, heavy metal, copper binding; HET: TRS; 1.50A {Ralstonia metallidurans CH34} PDB: 2wto_A*
Probab=22.66 E-value=30 Score=28.68 Aligned_cols=22 Identities=27% Similarity=0.326 Sum_probs=18.5
Q ss_pred EEEEcCCEEEEEEEecCCCceE
Q 008799 208 LHVESGKTYLLRIVNAAVNDEL 229 (553)
Q Consensus 208 ~~v~~G~~~rlRliN~~~~~~~ 229 (553)
|.|+.||++||.+.|-+..+.+
T Consensus 73 InV~~GETVrF~v~nkt~~W~F 94 (131)
T 2wtp_A 73 VNVDSGETVAFRAGEKIVAWTF 94 (131)
T ss_dssp EEEETTCEEEEEETTEEEEEEE
T ss_pred EEecCCCEEEEEeCCcEEEEEE
Confidence 9999999999999988755544
No 161
>2xzz_A Protein-glutamine gamma-glutamyltransferase K; 2.30A {Homo sapiens}
Probab=22.58 E-value=81 Score=24.85 Aligned_cols=53 Identities=13% Similarity=0.129 Sum_probs=33.7
Q ss_pred CEEEEEEEeCCCCC---ceeeeCCCcccCCCCCCCCCCccCCCCCCCCceEEEEEe-CCCCcc
Q 008799 62 DNVIVRVTNHVKYN---VTIHWHGVRQLRTGWYDGPAYITQCPIQPGQSYVYNFTL-TGQRGT 120 (553)
Q Consensus 62 d~v~v~l~N~l~~~---~~iH~HG~~~~~~~~~DGv~~~tq~~i~pG~~~~y~~~~-~~~~Gt 120 (553)
=.++|+++|-|+.+ ..++..|.-... + --+....|.||++..+++.. +..+|.
T Consensus 22 l~v~vsf~NPL~~~L~~c~~~vEG~GL~~-----~-~~~~~~~v~pg~~~~~~~~~~P~~~G~ 78 (102)
T 2xzz_A 22 CEVQIVFKNPLPVTLTNVVFRLEGSGLQR-----P-KILNVGDIGGNETVTLRQSFVPVRPGP 78 (102)
T ss_dssp EEEEEEEECCSSSCBCSEEEEEEETTTEE-----E-EEEEECCBCTTCEEEEEEEECCCSCSS
T ss_pred EEEEEEEECCCCCcccCEEEEEECCCCCc-----c-eEEEcCcCCCCCEEEEEEEEecCcccc
Confidence 36789999999865 345555533211 1 00111359999999999998 555665
No 162
>1xvs_A Protein APAG; MCSG APC26324, midwest center for structural genomics, structure initiative, PSI, structural genomics, unknown FUN; 2.01A {Vibrio cholerae} SCOP: b.1.23.1
Probab=22.05 E-value=90 Score=25.68 Aligned_cols=49 Identities=14% Similarity=0.188 Sum_probs=29.7
Q ss_pred EEEEEEEecCCCceEEEEEcCceEEEEeeCCCccc----ceEeeEEEeCCCccEEE
Q 008799 215 TYLLRIVNAAVNDELFFKIAGHNLTVVEVDSSYTK----PFKTDTIFIGPGQTTNA 266 (553)
Q Consensus 215 ~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~~----p~~~d~~~l~pgeR~dv 266 (553)
.|++||-|.+... +.|-...+.+...||..-+ -+....=.|.|||.+..
T Consensus 31 aY~I~I~N~~~~~---vQL~sRhW~Itd~~g~~~eV~G~GVVG~qP~L~PGe~f~Y 83 (126)
T 1xvs_A 31 AYLITIKNLSSQT---VQLMSRRWLITDADGKQTVVEGDGVVGEQPRIKANDEYTY 83 (126)
T ss_dssp EEEEEEEECSSSC---EEEEEEEEEEEETTCCEEEEEEESBTTBCCEECTTCEEEE
T ss_pred EEEEEEEECCCCC---EEEEecEEEEEeCCCCEEEEECCceEcCCCcCCCCCceEE
Confidence 4889999998654 4555566777666665321 12223446777775543
No 163
>3kmh_A D-lyxose isomerase; cupin beta-barrel, structural genomics, montreal-kingston BA structural genomics initiative, BSGI; 1.58A {Escherichia coli O157} PDB: 3mpb_A*
Probab=22.05 E-value=1.7e+02 Score=26.83 Aligned_cols=51 Identities=16% Similarity=0.241 Sum_probs=29.7
Q ss_pred eEEEEEcCCEEEEEEEecCCC-----ceEEEEEcCceEEEEeeCCCcccceEeeEEEeCCCccEEE
Q 008799 206 FTLHVESGKTYLLRIVNAAVN-----DELFFKIAGHNLTVVEVDSSYTKPFKTDTIFIGPGQTTNA 266 (553)
Q Consensus 206 ~~~~v~~G~~~rlRliN~~~~-----~~~~~~i~gh~~~via~DG~~~~p~~~d~~~l~pgeR~dv 266 (553)
..|..+-|-.+.++|-|.+.. ....+.++|.+.++ .....|.|.|||.+.+
T Consensus 129 EdiinRgGG~L~v~Ly~~~~~~~~~~~~v~V~~DG~~~~~----------~aG~~i~L~PGESiTl 184 (246)
T 3kmh_A 129 EDIINRGGGNLIVELWNADSNEQTADSDITVVIDGCRQKH----------TAGSQLRLSPGESICL 184 (246)
T ss_dssp EEEEEEEESCEEEEEEEBCTTSSBCCSCEEEEETTEEEEE----------CTTCEEEECTTCEEEE
T ss_pred ccEEecCCCeEEEEEEecCCCccccCCCeEEecCCeEEEe----------CCCCEEEECCCCeEec
Confidence 445556665566677766543 23334444444333 1246889999998775
No 164
>2cio_B Inhibitor of cysteine peptidase; hydrolase/inhibitor, complex hydrolase/inhibitor, ICP, cysteine protease, allergen, protease, thiol protease; 1.5A {Trypanosoma brucei}
Probab=21.99 E-value=2.8e+02 Score=22.39 Aligned_cols=25 Identities=8% Similarity=0.117 Sum_probs=17.8
Q ss_pred CCeEeecCCCEEEEEEEeCCCCCce
Q 008799 53 GPTLHAREDDNVIVRVTNHVKYNVT 77 (553)
Q Consensus 53 GP~i~v~~Gd~v~v~l~N~l~~~~~ 77 (553)
|-+|.++.||++.|.|.-+-.-...
T Consensus 12 ~~ti~l~~Ge~~~I~L~~NPtTGY~ 36 (121)
T 2cio_B 12 NKTIRMVIGETFTIELESNPTTGYT 36 (121)
T ss_pred CcEEEEcCCCEEEEEeCCCCCCCeE
Confidence 3469999999999998755543333
No 165
>3rpf_C Molybdopterin converting factor, subunit 1 (MOAD); MCSG, PSI-biology, structural genomics, midwest center for S genomics, transferase; 1.90A {Helicobacter pylori}
Probab=21.66 E-value=50 Score=24.06 Aligned_cols=26 Identities=8% Similarity=0.166 Sum_probs=21.4
Q ss_pred eeEEEECCCC-CCCeEeecCCCEEEEE
Q 008799 42 KSIVTVNGKF-PGPTLHAREDDNVIVR 67 (553)
Q Consensus 42 ~~~~~~NG~~-pGP~i~v~~Gd~v~v~ 67 (553)
.-.+.+||++ ++..-.++.||+|.|-
T Consensus 42 ~~~vavN~~~v~~~~~~l~~gDeV~i~ 68 (74)
T 3rpf_C 42 VCAIALNDHLIDNLNTPLKDGDVISLL 68 (74)
T ss_dssp TCEEEESSSEECCTTCCCCTTCEEEEE
T ss_pred ccEEEECCEEcCCCCcCCCCCCEEEEE
Confidence 3568899999 8888889999998763
No 166
>2f1e_A Protein APAG; APAG protein, xanthomonas axonopodis PV.citri, structural genomics, unknown function; NMR {Xanthomonas axonopodis PV}
Probab=21.17 E-value=1e+02 Score=25.37 Aligned_cols=49 Identities=14% Similarity=0.301 Sum_probs=29.0
Q ss_pred EEEEEEEecCCCceEEEEEcCceEEEEeeCCCccc----ceEeeEEEeCCCccEEE
Q 008799 215 TYLLRIVNAAVNDELFFKIAGHNLTVVEVDSSYTK----PFKTDTIFIGPGQTTNA 266 (553)
Q Consensus 215 ~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~~----p~~~d~~~l~pgeR~dv 266 (553)
.|++||-|.+... +.|-...+.+...||..-+ -+....=.|.|||.+..
T Consensus 32 aY~I~I~N~~~~~---vQL~sRhW~Itd~~g~~~eV~G~GVVG~qP~L~PGe~f~Y 84 (127)
T 2f1e_A 32 AYSIRIQNAGAVP---ARLVARHWQITDGNGRTEQVDGEGVVGEQPWLRPGEAFHY 84 (127)
T ss_dssp EEEEEEEECSSSC---EEEEEEEEEEEETTSCEEEEEESSBTTBCCEECTTCEEEE
T ss_pred EEEEEEEeCCCCC---EEEEeceEEEEeCCCCEEEEECCCeecCCCcCCCCCceEE
Confidence 4889999998654 3455556666666665321 12223446778875543
No 167
>1jer_A Cucumber stellacyanin; electron transport, copper, glycoprotein, hydroxylation; 1.60A {Cucumis sativus} SCOP: b.6.1.1
Probab=20.86 E-value=1.2e+02 Score=25.38 Aligned_cols=34 Identities=24% Similarity=0.450 Sum_probs=28.7
Q ss_pred EEe-cCceeeEEeecchhhHhccceEEEEEeCCCC
Q 008799 505 FRA-DNPGVWFLHCHLEVHTSWGLKMAFVVDNGKG 538 (553)
Q Consensus 505 f~a-dnpG~w~~HCHil~H~d~GM~~~~~V~~~~~ 538 (553)
|+. +.+|.+-|=|=+..|=..||-+.+.|.....
T Consensus 77 v~L~~~~G~~YFicg~~gHC~~GmKl~I~V~~~~~ 111 (138)
T 1jer_A 77 IERLDELGMHYFVCTVGTHCSNGQKLSINVVAANA 111 (138)
T ss_dssp EEECCSSEEEEEECCSTTTGGGTCEEEEEEECCC-
T ss_pred EEeccCCcCEEEEcCCCCccccCCEEEEEEcCCCC
Confidence 445 7899999999999999999999999986543
No 168
>2x3c_A Toxic extracellular endopeptidase; hydrolase; 1.99A {Aeromonas salmonicida subsp} PDB: 2x3a_A 2x3b_A
Probab=20.11 E-value=3.3e+02 Score=26.44 Aligned_cols=69 Identities=19% Similarity=0.185 Sum_probs=43.9
Q ss_pred CEEEEEEEecCCCceEEEEE---c---CceEEEEeeCCCccc----------ceEeeEEEeCCCccEEEEEEeCC-----
Q 008799 214 KTYLLRIVNAAVNDELFFKI---A---GHNLTVVEVDSSYTK----------PFKTDTIFIGPGQTTNALLTADK----- 272 (553)
Q Consensus 214 ~~~rlRliN~~~~~~~~~~i---~---gh~~~via~DG~~~~----------p~~~d~~~l~pgeR~dv~v~~~~----- 272 (553)
-.+..-|-|.|....--|+. + -..|.| ..||..++ |..-+-+.|.|||.+++.++...
T Consensus 38 ~~vk~tvtN~g~~~~~lLk~~~lD~~~~~~~~V-~~~G~~v~f~Gi~~~~~~~~~d~f~~L~pG~Sve~~~dla~~ydLs 116 (343)
T 2x3c_A 38 VRVNLTLTNTGDKPIRLLKWQLPGSDDAPLFLV-ERDGQPVSYEGALIKRAAPTDKDFQLLKAGQSLTVQAEVSGLYDMS 116 (343)
T ss_dssp CEEEEEEEECSSSCEEEEGGGSCSSSCCCCEEE-EETTEECCBCSCCCCCCCCCGGGEEEECTTCEEEEEEECTTTBTCC
T ss_pred eEEEEEEEeCCCCceEeeccCCCCcCccceEEE-EeCCcccceeeEEEeccCCChhhcEEeCCCCeEEEEEehhhccccC
Confidence 45667777777644221221 2 234555 46665431 32357899999999999999975
Q ss_pred CCCeeEEEEee
Q 008799 273 KIGKYLITISP 283 (553)
Q Consensus 273 ~~g~~~i~~~~ 283 (553)
.+|.|.++...
T Consensus 117 ~gG~y~v~~~g 127 (343)
T 2x3c_A 117 AQGQYSIRYQL 127 (343)
T ss_dssp SCEEEEEEEC-
T ss_pred CCceEEEEEee
Confidence 25789888763
Done!