Query 008801
Match_columns 553
No_of_seqs 85 out of 116
Neff 2.9
Searched_HMMs 29240
Date Mon Mar 25 12:01:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008801.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/008801hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1v7w_A Chitobiose phosphorylas 99.7 1.4E-17 4.9E-22 177.7 15.3 248 233-539 349-620 (807)
2 3qde_A Cellobiose phosphorylas 99.6 1.4E-14 4.8E-19 158.3 17.6 237 233-540 360-630 (811)
3 3rrs_A Cellobiose phosphorylas 99.5 8.7E-14 3E-18 152.6 17.7 236 233-539 367-642 (822)
4 3c68_A Uncharacterized protein 99.1 1.1E-09 3.8E-14 119.5 18.0 255 226-535 317-670 (761)
5 2okx_A Rhamnosidase B; alpha b 99.1 6.4E-10 2.2E-14 122.8 16.3 210 228-518 573-789 (956)
6 3cih_A Putative alpha-rhamnosi 99.0 1.5E-09 5.2E-14 116.5 11.7 232 188-518 307-546 (739)
7 2z07_A Putative uncharacterize 98.6 1.2E-06 4.2E-11 86.9 16.9 249 191-518 4-324 (420)
8 2jg0_A Periplasmic trehalase; 98.5 1.1E-06 3.8E-11 92.4 15.9 223 225-531 121-407 (535)
9 1lf6_A Glucoamylase; (alpha/al 98.1 3.7E-05 1.3E-09 82.6 14.8 157 225-433 335-492 (684)
10 1ulv_A Glucodextranase; GH fam 98.1 1.7E-05 6E-10 89.5 12.7 159 226-433 325-484 (1020)
11 3qry_B Putative uncharacterize 96.8 0.0094 3.2E-07 62.6 12.1 222 202-450 39-294 (426)
12 3p2c_A Putative glycosyl hydro 96.6 0.0052 1.8E-07 65.1 8.8 223 202-450 64-322 (463)
13 3qt9_A Putative uncharacterize 96.4 0.0089 3.1E-07 62.8 9.3 221 202-450 42-294 (427)
14 2p0v_A Hypothetical protein BT 96.0 0.016 5.4E-07 61.8 8.8 225 202-450 86-340 (489)
15 2vn4_A Glucoamylase; hydrolase 95.2 0.099 3.4E-06 56.2 11.1 185 207-432 29-229 (599)
16 2fba_A Glucoamylase Glu1; (alp 95.1 0.072 2.4E-06 56.0 9.6 191 207-432 45-266 (492)
17 1gai_A Glucoamylase-471; hydro 94.6 0.11 3.8E-06 54.6 9.4 154 207-405 30-207 (472)
18 2e4g_A Tryptophan halogenase; 34.3 76 0.0026 32.6 7.0 37 494-530 488-539 (550)
19 2rdy_A BH0842 protein; PSI-II, 32.7 1E+02 0.0035 34.1 8.2 85 317-403 451-543 (803)
20 1nzn_A CGI-135 protein, fissio 31.7 1.2E+02 0.0041 26.8 7.0 54 339-419 52-121 (126)
21 2pyx_A Tryptophan halogenase; 26.3 1.2E+02 0.0041 30.8 6.8 143 361-530 346-510 (526)
No 1
>1v7w_A Chitobiose phosphorylase; beta-sandwich, (alpha/alpha)6 barrel, transferase; HET: NDG NAG; 1.60A {Vibrio proteolyticus} SCOP: a.102.1.4 b.30.5.3 PDB: 1v7v_A* 1v7x_A*
Probab=99.74 E-value=1.4e-17 Score=177.73 Aligned_cols=248 Identities=17% Similarity=0.212 Sum_probs=166.5
Q ss_pred ccchHHHHHHHhcCChHHHHHHHHhhhhhchhhhhccccCCCCC-cccceEEEeeccCCCCCcc------ccccCCcccc
Q 008801 233 RDFVPSALAFLLKGEGEIVRNFLLHTLQLQSWEKTVDCYSPGQG-LMPASFKVRNVPLESNKFE------EVLDPDFGES 305 (553)
Q Consensus 233 RDfVPSaLafLl~Ge~eIVRnFL~~tLqLQs~ek~ld~~~~g~G-lmPASFkV~~~~~~~~~~e------e~l~aDFGe~ 305 (553)
||...++++++ .|++|++|++|......|.. .| ++|.-|....++ +.++ .+++.+.|+.
T Consensus 349 RD~~~~~~~l~-~~~p~~ar~~l~~~~~~Q~~----------~G~~~p~~~p~~~~~---~~g~~~~~~~~~~~g~~~~~ 414 (807)
T 1v7w_A 349 RDTAQDAISVP-HANPEMTRKRIVDLLRGQVK----------AGYGLHLFDPDWFDP---EKEDVAPSKSPTVVPTPSDE 414 (807)
T ss_dssp HHHHHHTTSCT-TTCHHHHHHHHHHHHHTBCT----------TSCBCSEECGGGGCC-----------------------
T ss_pred hHHhHHHHHHh-hcCHHHHHHHHHHHHhcccc----------CCCcceeeeeccccc---cccccCCccccccccCCCcc
Confidence 99999999966 99999999999988888854 34 455544110111 0011 1123335554
Q ss_pred c--cc-cccccccccHHHHHHHHHhhccccchhccc--hh-----------hHHHHHHHHHHhhhcCCCCCCceeecCCc
Q 008801 306 A--IG-RVAPVDSGLWWIILLRAYGKITGDYALQER--VD-----------VQTGIKLIMNLCLADGFDMFPSLLVTDGS 369 (553)
Q Consensus 306 A--IG-RVapVDSgLWWIILlraY~k~TGD~sla~~--pe-----------vQrGirlIL~lCL~~~Fd~fPtLlVpDg~ 369 (553)
+ +| +..-.|..+|||++++.|.+.|||.+|++. |- ++++++++++.+-. +..|.....|=.
T Consensus 415 ~~~~g~~~~~~D~~lw~~~~~~~y~~~tGD~~~L~e~~p~~~~~~~~v~e~~~~~~~~~~~~~~~---~GL~~~~~~DW~ 491 (807)
T 1v7w_A 415 DKIHGIKDTCSDDHLWLIPTICKYVMETGETSFFDQMIPYADGGEASVYEHMKAALDFSAEYVGQ---TGICKGLRADWN 491 (807)
T ss_dssp --CCCGGGCBSSGGGGHHHHHHHHHHHHCCGGGGGCEEECTTSCEEEHHHHHHHHHHHHHHSBCT---TSCBEEETCSSS
T ss_pred hhhcCCCCCccchhhHHHHHHHHHHHHhCCHHHHhcccccccCCcchHHHHHHHHHHHHHhcCCC---CCCcccCCCCCC
Confidence 4 43 334449999999999999999999999996 53 99999988875432 444443333321
Q ss_pred -cccccccccCCCchhHHHHHHHHHHHHHHHhcccCCCCchHHHHHHHHHHHHHHHhhhhhcccchhhhhhhhccCCccc
Q 008801 370 -CMIDRRMGIHGHPLEIQALFYTALRCSREMLTVSDGSGSNNLVRAINNRLSALSFHIREYYWVDMKKINEIYRYKTEEY 448 (553)
Q Consensus 370 -~MIDRRMgv~G~PLEIQaLfY~ALRca~eLL~~~~~~~~~~~~~~I~~RL~aLs~hir~yYWlD~~~ln~IyRykTEeY 448 (553)
+| + +| .|.++++|+|+|.||+++.+|.+...+ .+.++...++...|+..|+++||-+-. ..|+ .--|
T Consensus 492 D~~-~--~~-~g~~v~~~a~~y~al~~~a~la~~lG~---~~~a~~~~~~A~~lk~~~~~~~w~~~~---~~f~--~~~~ 559 (807)
T 1v7w_A 492 DCL-N--LG-GGESSMVSFLHFWALQEFIDLAKFLGK---DQDVNTYTEMAANVREACETHLWDDEG---GWYI--RGLT 559 (807)
T ss_dssp TTC-C--CE-EEEEHHHHHHHHHHHHHHHHHHHHHTC---HHHHHHHHHHHHHHHHHHHHHSEETTT---TEEC--CEEC
T ss_pred CcC-C--CC-CCeehhHHHHHHHHHHHHHHHHHHcCC---HHHHHHHHHHHHHHHHHHHHhccCCCC---Ceee--eeec
Confidence 22 3 35 899999999999999999999987533 456677788888889999999997530 0010 0000
Q ss_pred chhhhcccCcCCCCcchhhhhccCCCCCeeeeeccCCcccchhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHhhhhhcCC
Q 008801 449 STDATNKFNIYPEQIPSWLMDWIPEEGGYLIGNLQPAHMDFRFFTLGNLWSIVSSLGTPKQNESILNLIEAKWDDLVGHM 528 (553)
Q Consensus 449 s~~a~NkFNI~pesIP~Wl~dWlp~~GGYliGNl~P~rmDFRfFsLGNllAILssLat~~Qs~aIm~Lie~rW~dLvg~M 528 (553)
..| -.+|.. ...+.+.++.+|.+|+++++++++|++++|+.|++ .|..+.
T Consensus 560 ------------------------~d~-~~~g~~--~~~~~~~~~~~~~~al~~g~~~~e~a~~~l~~v~~---~L~~~~ 609 (807)
T 1v7w_A 560 ------------------------KNG-DKIGTA--QQQEGRVHLESNTLAVLSGLASQERGEQAMDAVDE---HLFSPY 609 (807)
T ss_dssp ------------------------TTS-CEESCT--TCSSCCEEHHHHHHHHHTTCSCHHHHHHHHHHHHH---HHEETT
T ss_pred ------------------------cCC-CCcCCc--cCCCCcCcccchHHHHhhCCCCHHHHHHHHHHHHH---hcCCCC
Confidence 000 011111 11345788999999999999999999999999954 566677
Q ss_pred CceecccCCCC
Q 008801 529 PLKICYPALES 539 (553)
Q Consensus 529 PlKICyPAle~ 539 (553)
.++.++|+...
T Consensus 610 G~~~~~p~~~~ 620 (807)
T 1v7w_A 610 GLHLNAPSFST 620 (807)
T ss_dssp EECSEESCCCS
T ss_pred ceeecCCcccc
Confidence 79999998764
No 2
>3qde_A Cellobiose phosphorylase; cellulase, phosphate, transferase; 2.40A {Clostridium thermocellum}
Probab=99.59 E-value=1.4e-14 Score=158.32 Aligned_cols=237 Identities=20% Similarity=0.225 Sum_probs=171.7
Q ss_pred ccchHHHHHHHhcCChHHHHHHHHhhhhhchhhhhccccCCCCCcccceEEEeeccCCCCCccccccCCccccccccccc
Q 008801 233 RDFVPSALAFLLKGEGEIVRNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVRNVPLESNKFEEVLDPDFGESAIGRVAP 312 (553)
Q Consensus 233 RDfVPSaLafLl~Ge~eIVRnFL~~tLqLQs~ek~ld~~~~g~GlmPASFkV~~~~~~~~~~ee~l~aDFGe~AIGRVap 312 (553)
||-.--+++++. ..||++|.+|+.+...|-. .|.+|.-|. |.. .-|...|+...
T Consensus 360 RD~~qd~~~~~~-~~p~~~r~~il~~~~~Q~~----------dG~~~h~~~----p~~----------~~g~~~~~~~~- 413 (811)
T 3qde_A 360 RDSNQDLLGFVH-QIPERARERLLDLAATQLE----------DGSAYHQYQ----PLT----------KKGNNEIGSNF- 413 (811)
T ss_dssp HHHHHHHHTTTT-TCHHHHHHHHHHHHTTBCT----------TSCBCSEEC----TTT----------CCEECTTCCCB-
T ss_pred HHHHHHHHHHHh-cCHHHHHHHHHHHHhhccc----------CCCccceec----CCC----------CCCCCCCCCCc-
Confidence 999999999986 5799999999999988854 788998882 211 11334444333
Q ss_pred cccccHHHHHHHHHhhccccchhccc---------------hhhHHHHHHHHHHhhhcCCCCCCceeec-----CCccc-
Q 008801 313 VDSGLWWIILLRAYGKITGDYALQER---------------VDVQTGIKLIMNLCLADGFDMFPSLLVT-----DGSCM- 371 (553)
Q Consensus 313 VDSgLWWIILlraY~k~TGD~sla~~---------------pevQrGirlIL~lCL~~~Fd~fPtLlVp-----Dg~~M- 371 (553)
+|..||+|.+++.|++.|||.+|.+. +.+.++++.+++- ++...+.+.. ||.-|
T Consensus 414 ~D~~lW~i~av~~Y~~~TGD~~~L~e~~p~~~~~~~~~tl~eh~~ra~~~~~~~-----~g~~GL~~~g~~DWnD~ln~~ 488 (811)
T 3qde_A 414 NDDPLWLILATAAYIKETGDYSILKEQVPFNNDPSKADTMFEHLTRSFYHVVNN-----LGPHGLPLIGRADWNDCLNLN 488 (811)
T ss_dssp TTHHHHHHHHHHHHHHHHCCGGGGGSEEEETTEEEEEEEHHHHHHHHHHHHHTC-----BCTTSSBBCBTCSSSTTCCSS
T ss_pred ccchhHHHHHHHHHHHHHCCHHHHHhhhhhhcCCcccccHHHHHHHHHHHHHhc-----CCCCCCcccccCCchhhcccc
Confidence 89999999999999999999999963 3677888766642 2333333322 22222
Q ss_pred -----cccc-------cccCCCchhHHHHHHHHHHHHHHHhcccCCCCchHHHHHHHHHHHHHHHhhhhhcccchhhhhh
Q 008801 372 -----IDRR-------MGIHGHPLEIQALFYTALRCSREMLTVSDGSGSNNLVRAINNRLSALSFHIREYYWVDMKKINE 439 (553)
Q Consensus 372 -----IDRR-------Mgv~G~PLEIQaLfY~ALRca~eLL~~~~~~~~~~~~~~I~~RL~aLs~hir~yYWlD~~~ln~ 439 (553)
++.+ .|-+|-+.++++|||.||+.+.+|.+...+ .+.++...++...|+..++++|| |-++
T Consensus 489 ~~~~~vg~~~~~vtp~~~~~gesv~~~al~y~AL~~~a~lA~~lGd---~~~A~~~~~~A~~lk~a~~~~~W-dg~~--- 561 (811)
T 3qde_A 489 CFSTVPDESFQTTTSKDGKVAESVMIAGMFVFIGKDYVKLCEYMGL---EEEARKAQQHIDAMKEAILKYGY-DGEW--- 561 (811)
T ss_dssp CCCCCTTSCTTTSCCCCCSSCEEHHHHHHHHHHHHHHHHHHHHTTC---HHHHHHHHHHHHHHHHHHHHHSB-CSSS---
T ss_pred ccccccCccccccccccCCcccCHHHHHHHHHHHHHHHHHHHHcCC---HHHHHHHHHHHHHHHHHHHHhcc-CcCe---
Confidence 3332 245789999999999999999999997533 56778888888889999999999 4222
Q ss_pred hhccCCcccchhhhcccCcCCCCcchhhhhccCCCCCeeeeeccCCcccchhhhhhhHHHHHhcCCCHH-HHHHHHHHHH
Q 008801 440 IYRYKTEEYSTDATNKFNIYPEQIPSWLMDWIPEEGGYLIGNLQPAHMDFRFFTLGNLWSIVSSLGTPK-QNESILNLIE 518 (553)
Q Consensus 440 IyRykTEeYs~~a~NkFNI~pesIP~Wl~dWlp~~GGYliGNl~P~rmDFRfFsLGNllAILssLat~~-Qs~aIm~Lie 518 (553)
|+ ..+-.. |--+|- ..-.+-|.|++++.+|+|+++++++ |++.+|+.|+
T Consensus 562 -y~--------------------------ra~~~d-g~~~gs--~~~~~~qi~~~~q~~avlsGia~~e~ra~~~m~~v~ 611 (811)
T 3qde_A 562 -FL--------------------------RAYDDF-GRKVGS--KENEEGKIFIESQGFCVMAEIGLEDGKALKALDSVK 611 (811)
T ss_dssp -BC--------------------------CEECTT-SCEESS--TTSSSCCEESHHHHHHHHTTCSSSSSHHHHHHHHHH
T ss_pred -EE--------------------------EEEcCC-CCCCCc--cCCCCceEEecchhHHHHhCCCCchHHHHHHHHHHH
Confidence 21 111111 112221 1123447889999999999999999 9999999995
Q ss_pred HHhhhhhcCCCceecccCCCCC
Q 008801 519 AKWDDLVGHMPLKICYPALESE 540 (553)
Q Consensus 519 ~rW~dLvg~MPlKICyPAle~~ 540 (553)
+ .|..+.=++.+.||....
T Consensus 612 ~---~L~t~~Glrll~p~f~~~ 630 (811)
T 3qde_A 612 K---YLDTPYGLVLQNPAFTRY 630 (811)
T ss_dssp H---HHCCTTCCCSEESCCCSC
T ss_pred H---HhCCCcceEeecCCcccc
Confidence 4 588888899999997764
No 3
>3rrs_A Cellobiose phosphorylase; GH94, alpha barrel, disaccharide phosphorylase, transferase; 1.70A {Cellulomonas uda} PDB: 3rsy_A* 3s4a_A* 3s4b_A* 3s4c_A* 3s4d_A* 2cqs_A* 2cqt_A* 3qfy_A* 3qfz_A* 3qg0_A* 3act_A* 3acs_A* 3afj_A*
Probab=99.54 E-value=8.7e-14 Score=152.57 Aligned_cols=236 Identities=19% Similarity=0.197 Sum_probs=171.8
Q ss_pred ccchHHHHHHHhcCChHHHHHHHHhhhhhchhhhhccccCCCCCcccceEEEeeccCCCCCccccccCCccccccccccc
Q 008801 233 RDFVPSALAFLLKGEGEIVRNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVRNVPLESNKFEEVLDPDFGESAIGRVAP 312 (553)
Q Consensus 233 RDfVPSaLafLl~Ge~eIVRnFL~~tLqLQs~ek~ld~~~~g~GlmPASFkV~~~~~~~~~~ee~l~aDFGe~AIGRVap 312 (553)
||-.--+++++. ..||++|.+|+.+...|-. .|.+|.-|. |.. ..|...|+...
T Consensus 367 RD~~qd~~~~~~-~~pe~ar~~il~~~~~Q~~----------dG~v~h~~~----p~~----------~~g~~~~~~~~- 420 (822)
T 3rrs_A 367 RDSNQDLLGFVH-LIPERARERIIDIASTQFA----------DGSAYHQYQ----PLT----------KRGNNDIGSGF- 420 (822)
T ss_dssp HHHHHHHHHHTT-TCHHHHHHHHHHHHTTCCT----------TSCCCSEEE----TTT----------TEECTTTCSCB-
T ss_pred HHHHHHHHHHHh-cCHHHHHHHHHHHHHhhcc----------cCcccceec----CcC----------CCCccCCCCcc-
Confidence 999999999986 5799999999999988864 699999883 211 11444444333
Q ss_pred cccccHHHHHHHHHhhccccchhccc---------------hhhHHHHHHHHHHhhhcCCCCCCceeec-----CCccc-
Q 008801 313 VDSGLWWIILLRAYGKITGDYALQER---------------VDVQTGIKLIMNLCLADGFDMFPSLLVT-----DGSCM- 371 (553)
Q Consensus 313 VDSgLWWIILlraY~k~TGD~sla~~---------------pevQrGirlIL~lCL~~~Fd~fPtLlVp-----Dg~~M- 371 (553)
+|..||+|.+++.|++.|||.+|.+. ..+.++++.+++-. +...+.+.- ||.-|
T Consensus 421 ~D~~lWl~~av~~Yi~~TGD~~~L~e~~p~~~~~~~~~tl~eh~~ra~~~~~~~~-----g~~GLp~~g~gDWnD~ln~~ 495 (822)
T 3rrs_A 421 NDDPLWLIAGTAAYIKETGDFSILDEPVPFDNEPGSEVPLFEHLTRSFEFTVTHR-----GPHGLPLIGRADWNDCLNLN 495 (822)
T ss_dssp TTHHHHHHHHHHHHHHHHCCGGGGGSEECSTTCTTCCEEHHHHHHHHHHHHHHSB-----CTTSSBBCBTCSSSTTCCTT
T ss_pred cchHhHHHHHHHHHHHHHCCHHHHHhhhhhhccccccccHHHHHHHHHHHHHhcC-----CCCCCcccCCCcchhhcccc
Confidence 89999999999999999999999974 26788888777522 222333332 22222
Q ss_pred -----cccc-------cccCCCchhHHHHHHHHHHHHHHHhcccCCCCchHHHHHHHHHHHHHHHhhhhhcccchhhhhh
Q 008801 372 -----IDRR-------MGIHGHPLEIQALFYTALRCSREMLTVSDGSGSNNLVRAINNRLSALSFHIREYYWVDMKKINE 439 (553)
Q Consensus 372 -----IDRR-------Mgv~G~PLEIQaLfY~ALRca~eLL~~~~~~~~~~~~~~I~~RL~aLs~hir~yYWlD~~~ln~ 439 (553)
++.+ .|-+|-+.++++|||.||+.+.+|.+.. + ..+.++...++...|+..+++++| |-++..
T Consensus 496 ~~~~~vg~~~~~~~p~~~~~Gesv~~~al~y~AL~~~a~lA~~~-G--~~~~A~~~~~~A~~lk~a~~~~~W-dg~~y~- 570 (822)
T 3rrs_A 496 CFSTTPGESFQTTENQAGGVAESTFIAAQFVLYGEQYAELAARR-G--LADVADRARGHVAEMRDALLTDGW-DGSWFL- 570 (822)
T ss_dssp CCCCSTTCCTTTCCSSCCCCCEEHHHHHHHHHHHHHHHHHHHHT-T--CHHHHHHHHHHHHHHHHHHHTTTB-CSSSBC-
T ss_pred cccccccccccccccccCCccccHHHHHHHHHHHHHHHHHHHHc-C--ChHHHHHHHHHHHHHHHHHHHhcc-CcceeE-
Confidence 3332 3457899999999999999999999985 3 356778888888889999999999 432211
Q ss_pred hhccCCcccchhhhcccCcCCCCcchhhhhccCCCCCeeeeeccCCcccchhhhhhhHHHHHhcCCCHH-------HHHH
Q 008801 440 IYRYKTEEYSTDATNKFNIYPEQIPSWLMDWIPEEGGYLIGNLQPAHMDFRFFTLGNLWSIVSSLGTPK-------QNES 512 (553)
Q Consensus 440 IyRykTEeYs~~a~NkFNI~pesIP~Wl~dWlp~~GGYliGNl~P~rmDFRfFsLGNllAILssLat~~-------Qs~a 512 (553)
..+-..| =-+| +...-+-|.++++..+++|+++++++ |++.
T Consensus 571 -----------------------------ra~d~dg-~~~g--s~~~~~~~i~~~~q~~avlsGia~~e~~~~~~~~a~~ 618 (822)
T 3rrs_A 571 -----------------------------RAYDYYG-NPIG--TDAHDEGKIWIEPQGFAVMAGVGVGEGPQDTDAPAIK 618 (822)
T ss_dssp -----------------------------CEECTTS-CEES--CTTSSSCCEEHHHHHHHHHTTTTCCSSTTCTTSHHHH
T ss_pred -----------------------------EEEcCCC-CCcc--ccCCCCceEEeccchhHhhcCCCCcccccchHHHHHH
Confidence 1111111 1122 11223457889999999999999999 9999
Q ss_pred HHHHHHHHhhhhhcCCCceecccCCCC
Q 008801 513 ILNLIEAKWDDLVGHMPLKICYPALES 539 (553)
Q Consensus 513 Im~Lie~rW~dLvg~MPlKICyPAle~ 539 (553)
+|+.|++ .|..+.=++.+.||...
T Consensus 619 al~~v~~---~L~t~~Girll~p~f~~ 642 (822)
T 3rrs_A 619 ALDSVNE---MLATDHGMVLQYPAYTT 642 (822)
T ss_dssp HHHHHHH---HTEETTEEBSEESCCSS
T ss_pred HHHHHHH---HcCCCCeEEEcCCCccc
Confidence 9999954 58888888999998654
No 4
>3c68_A Uncharacterized protein YGJK; GH63, processing alpha-glucosidase, alpha/alpha barrel, hydrolase; HET: BMA; 1.50A {Escherichia coli} PDB: 3c67_A* 2ds3_A* 3c69_A* 3d3i_A
Probab=99.13 E-value=1.1e-09 Score=119.50 Aligned_cols=255 Identities=12% Similarity=0.035 Sum_probs=157.3
Q ss_pred CCCceeeccchHHHHHHHhcCChHHHHHHHHhhhhhchhhhhccccCC-CCCcccceEEEeeccCCCCCccccccCCccc
Q 008801 226 NYDQVFIRDFVPSALAFLLKGEGEIVRNFLLHTLQLQSWEKTVDCYSP-GQGLMPASFKVRNVPLESNKFEEVLDPDFGE 304 (553)
Q Consensus 226 NYdQVFiRDfVPSaLafLl~Ge~eIVRnFL~~tLqLQs~ek~ld~~~~-g~GlmPASFkV~~~~~~~~~~ee~l~aDFGe 304 (553)
+++++|.||-...+++++ ...+|+.|..|...+..|..+ .|.+++ ..|.||.-+. ..+ .. ..+|+
T Consensus 317 ~~~~~w~wDs~~~a~gL~-~~~~elAr~~L~~l~~~Q~~~--~d~~r~~~~G~IP~~~~--~~~-----~p----~r~g~ 382 (761)
T 3c68_A 317 SGNQTWPWDTWKQAFAMA-HFNPDIAKENIRAVFSWQIQP--GDSVRPQDVGFVPDLIA--WNL-----SP----ERGGD 382 (761)
T ss_dssp CTTCBCHHHHHHHHHHHT-TTCHHHHHHHHHHHHTTCCCT--TCSSCGGGTTCCCSBBC--SSC-----CG----GGTSC
T ss_pred CcCCeeccHHHHHHHHHH-HcCHHHHHHHHHHHHHhhhhc--ccCCccCCCCEeeeeec--cCC-----cc----cccCc
Confidence 345599999999999776 569999999999988888431 122211 3688998762 110 00 01121
Q ss_pred ccc---ccccccccccHHHHHHHHHhhccccchhccc--hhhHHHHHHHHHHhhhcCCCCCCcee----------ecCC-
Q 008801 305 SAI---GRVAPVDSGLWWIILLRAYGKITGDYALQER--VDVQTGIKLIMNLCLADGFDMFPSLL----------VTDG- 368 (553)
Q Consensus 305 ~AI---GRVapVDSgLWWIILlraY~k~TGD~sla~~--pevQrGirlIL~lCL~~~Fd~fPtLl----------VpDg- 368 (553)
.+. ++.-| .||+++++.|.+.|||.+|.+. |.+++.++++++--- .|..+++. .|+|
T Consensus 383 ~~~~~~~~sqP----Pl~~~av~~yy~~tgD~~fL~e~~P~L~~~~~w~~~~rd---~d~~GL~~y~~~~~~~~~~prge 455 (761)
T 3c68_A 383 GGNWNERNTKP----SLAAWSVMEVYNVTQDKTWVAEMYPKLVAYHDWWLRNRD---HNGNGVPEYGATRDKAHNTESGE 455 (761)
T ss_dssp CSSCBCSCCCC----CCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHSC---TTCSSCCCCEEECCTTTBCTTSC
T ss_pred cccccCCCCCc----HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHhCCC---CCcCccEEecccccccccCCCcc
Confidence 111 22222 7788999999999999999986 999999998876532 22222222 1222
Q ss_pred -------------------------------------------ccc-----------------------ccccc------
Q 008801 369 -------------------------------------------SCM-----------------------IDRRM------ 376 (553)
Q Consensus 369 -------------------------------------------~~M-----------------------IDRRM------ 376 (553)
+.| .|.+.
T Consensus 456 ~~~~d~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~a~weSG~D~s~rw~~~~~~~~~~y~~~~~~~~~w~~~~~~n 535 (761)
T 3c68_A 456 MLFTVKKGDKEETQSGLNNYARVVEKGQYDSLEIPAQVAASWESGRDDAAVFGFIDKEQLDKYVANGGKRSDWTVKFAEN 535 (761)
T ss_dssp BEEEEEETTEEEEEECHHHHHHHHHHTCSSEEECHHHHHHHHHHTCTTCGGGTCCCHHHHHHHHHTTCCGGGGCCCEEEE
T ss_pred hhccccccccchhcccccccchhccccccccchhhhhhhccccCCCCcchhccccccccccccccccccccchhhhhccc
Confidence 223 01011
Q ss_pred -ccCCC---------chhHHHHHHHHHHHHHHHhcccCCCCchHHHHHHHHHHHHHHHhhhhhcccchhhhhhhhccCCc
Q 008801 377 -GIHGH---------PLEIQALFYTALRCSREMLTVSDGSGSNNLVRAINNRLSALSFHIREYYWVDMKKINEIYRYKTE 446 (553)
Q Consensus 377 -gv~G~---------PLEIQaLfY~ALRca~eLL~~~~~~~~~~~~~~I~~RL~aLs~hir~yYWlD~~~ln~IyRykTE 446 (553)
.-.|. |.++|+++|.|++++.+|.+.... .+.++...++...++.-|+++||-+-+..=--|.+.++
T Consensus 536 ~~~~G~l~~~~~~~~~VdlnA~ly~al~~lA~lA~~LG~---~e~A~~y~~~A~~lk~ai~~~fWd~e~G~y~D~~~~~~ 612 (761)
T 3c68_A 536 RSQDGTLLGYSLLQESVDQASYMYSDNHYLAEMATILGK---PEEAKRYRQLAQQLADYINTCMFDPTTQFYYDVRIEDK 612 (761)
T ss_dssp ECTTCCEEEEEESEECHHHHHHHHHHHHHHHHHHHHTTC---HHHHHHHHHHHHHHHHHHHHHTEETTTTEECCEECCSS
T ss_pred cccccccccCcccccCHHHHHHHHHHHHHHHHHHHHhCC---hHHHHHHHHHHHHHHHHHHHhCcCccCCEEEEEecCCC
Confidence 01132 889999999999999999987533 44556666777777788889999753221100111111
Q ss_pred ccchhhhcccCcCCCCcchhhhhccCCCCCeeeeeccCCcccchhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHhhhhhc
Q 008801 447 EYSTDATNKFNIYPEQIPSWLMDWIPEEGGYLIGNLQPAHMDFRFFTLGNLWSIVSSLGTPKQNESILNLIEAKWDDLVG 526 (553)
Q Consensus 447 eYs~~a~NkFNI~pesIP~Wl~dWlp~~GGYliGNl~P~rmDFRfFsLGNllAILssLat~~Qs~aIm~Lie~rW~dLvg 526 (553)
..++ ..-|..+ .-+-++++|++++++++++++|++++++.|+.. +.|.+
T Consensus 613 ~~~~----------------------~~~g~~~--------sn~~~~~s~~~pL~~Gl~~~e~a~~vl~~L~~~-~~l~t 661 (761)
T 3c68_A 613 PLAN----------------------GCAGKPI--------VERGKGPEGWSPLFNGAATQANADAVVKVMLDP-KEFNT 661 (761)
T ss_dssp CCTT----------------------SCSSCBC--------GGGCCCGGGGHHHHTTCSCHHHHHHHHHHHTCT-TTTCC
T ss_pred cccc----------------------cccccee--------ecchhhHHHHHHHHcCCCCHHHHHHHHHHHhCh-hhhcC
Confidence 1100 0001111 114478999999999999999999999999641 13556
Q ss_pred CCCceeccc
Q 008801 527 HMPLKICYP 535 (553)
Q Consensus 527 ~MPlKICyP 535 (553)
+.+++-+-|
T Consensus 662 ~~Girtls~ 670 (761)
T 3c68_A 662 FVPLGTAAL 670 (761)
T ss_dssp SSCSCSSCT
T ss_pred CCCccccCC
Confidence 666664433
No 5
>2okx_A Rhamnosidase B; alpha barrel, glycoside hydrolase family 78, I hydrolase; 1.90A {Bacillus SP}
Probab=99.12 E-value=6.4e-10 Score=122.75 Aligned_cols=210 Identities=18% Similarity=0.194 Sum_probs=141.6
Q ss_pred CceeeccchHHHHHHHh-cCChHHHHHHHHhhhhhchhhhhccccCCCCCcccceEEEeeccCCCCCccccccCCccccc
Q 008801 228 DQVFIRDFVPSALAFLL-KGEGEIVRNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVRNVPLESNKFEEVLDPDFGESA 306 (553)
Q Consensus 228 dQVFiRDfVPSaLafLl-~Ge~eIVRnFL~~tLqLQs~ek~ld~~~~g~GlmPASFkV~~~~~~~~~~ee~l~aDFGe~A 306 (553)
.-.|.+|....+++.+. .|+++++|++|....+.|. ..|.+|..+ + +..
T Consensus 573 r~~W~gD~~~~a~~~l~~~g~~~lar~~L~~l~~~Q~----------~dG~ip~~~-----p------------~~~--- 622 (956)
T 2okx_A 573 QVFWVGDSRNEALVNYYVFGETEIVERCLNLVPGSAD----------ETPLYLDQV-----P------------SAW--- 622 (956)
T ss_dssp CCCBHHHHHHHHHHHHHHTCCCHHHHHHHHHGGGGTT----------TCTTCCSBS-----S------------CSS---
T ss_pred CCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcc----------cCCCcCccc-----c------------ccc---
Confidence 45899999999988755 6899999999888776553 368888743 1 100
Q ss_pred cccccccccccHHHHHHHHHhhccccchhccc--hhhHHHHHHHHHHhhhcCCCCCCceeecCCcccccccc----ccCC
Q 008801 307 IGRVAPVDSGLWWIILLRAYGKITGDYALQER--VDVQTGIKLIMNLCLADGFDMFPSLLVTDGSCMIDRRM----GIHG 380 (553)
Q Consensus 307 IGRVapVDSgLWWIILlraY~k~TGD~sla~~--pevQrGirlIL~lCL~~~Fd~fPtLlVpDg~~MIDRRM----gv~G 380 (553)
.. ...|.++||+++++.|.+.|||.+|.+. |.+++.++++++.. |..+++..++..+ ..++ .-.|
T Consensus 623 -~~-~~~~~~~~~i~~~~~yy~~tGD~~~L~e~yp~lk~~l~~~~~~~-----d~~GLl~~~~~~~--~DW~d~~~~~~G 693 (956)
T 2okx_A 623 -SS-VIPNWTFFWILACREYAAHTGNEAFAARIWPAVKHTLTHYLEHI-----DDSGLLNMAGWNL--LDWAPIDQPNEG 693 (956)
T ss_dssp -CC-CCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHTTB-----CTTSSBCCSSCCC--CCSSSCCCCSSS
T ss_pred -cC-CCcChHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHhcC-----CCCCCEEeCCCCc--cCccCCCCCCCC
Confidence 01 2347899999999999999999999986 88888888776643 1123343332111 2222 2457
Q ss_pred CchhHHHHHHHHHHHHHHHhcccCCCCchHHHHHHHHHHHHHHHhhhhhcccchhhhhhhhccCCcccchhhhcccCcCC
Q 008801 381 HPLEIQALFYTALRCSREMLTVSDGSGSNNLVRAINNRLSALSFHIREYYWVDMKKINEIYRYKTEEYSTDATNKFNIYP 460 (553)
Q Consensus 381 ~PLEIQaLfY~ALRca~eLL~~~~~~~~~~~~~~I~~RL~aLs~hir~yYWlD~~~ln~IyRykTEeYs~~a~NkFNI~p 460 (553)
++...++++|.||+++.+|.+.... ++.++.-.++...|+..|+++||-.-... |..
T Consensus 694 ~~~~~~a~~~~al~~~a~lA~~LG~---~~~a~~y~~~A~~lk~ai~~~~wd~~~g~----------y~d---------- 750 (956)
T 2okx_A 694 IVTHQNLFLVKALRDSRALAAAAGA---TEEADAFAARADLLAETINAVLWDEEKRA----------YID---------- 750 (956)
T ss_dssp EEHHHHHHHHHHHHHHHHHHHHTTC---GGGGHHHHHHHHHHHHHHHHHSEETTTTE----------ECS----------
T ss_pred cCHHHHHHHHHHHHHHHHHHHHhCC---hHHHHHHHHHHHHHHHHHHHHhcCCCCCE----------EEe----------
Confidence 8899999999999999999987533 23345555666667778889999753211 111
Q ss_pred CCcchhhhhccCCCCCeeeeeccCCcccchhhhhhhHHHHHhcCCCHHHHHHHHHHHH
Q 008801 461 EQIPSWLMDWIPEEGGYLIGNLQPAHMDFRFFTLGNLWSIVSSLGTPKQNESILNLIE 518 (553)
Q Consensus 461 esIP~Wl~dWlp~~GGYliGNl~P~rmDFRfFsLGNllAILssLat~~Qs~aIm~Lie 518 (553)
.+... |...+. ....+|++|++++|++++|++++-+|++
T Consensus 751 ---------~~~~~-----g~~~~~-----~~~~s~~lall~Gl~p~~~~~av~~Ll~ 789 (956)
T 2okx_A 751 ---------CIHAD-----GRRSDV-----YSMQTQVVAYLCGVAQGEREAVIEGYLS 789 (956)
T ss_dssp ---------EECTT-----SCBCCC-----CBHHHHHHHHHTTCSCHHHHHHHHHHHH
T ss_pred ---------eecCC-----CCcccc-----cccHHHHHHHHhCCCCHHHHHHHHHHhc
Confidence 00000 000001 1257999999999999999988855554
No 6
>3cih_A Putative alpha-rhamnosidase; structural genomics, protein structure initiative II, NYSGXRC, (alpha/alpha)6 barrel domain; 2.33A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.99 E-value=1.5e-09 Score=116.52 Aligned_cols=232 Identities=16% Similarity=0.163 Sum_probs=147.8
Q ss_pred ccHHHHHHHHHHHHhhhh-hcCceeEEEeecCCCCCCCCCCCceeeccchHHHHHHHh-cCChHHHHHHHHhhhhhchhh
Q 008801 188 ETEIEKEAWRLLQEAVVT-YCESPIGTVAANDPGDKQPLNYDQVFIRDFVPSALAFLL-KGEGEIVRNFLLHTLQLQSWE 265 (553)
Q Consensus 188 ~~~li~eAwe~l~~siV~-y~g~PvGTvAA~D~~~~~alNYdQVFiRDfVPSaLafLl-~Ge~eIVRnFL~~tLqLQs~e 265 (553)
.++++.+.|+....++-. +.+.|+ |-..- . +..|..|...+++.-+. -++++++++.|.. +|
T Consensus 307 sd~~lN~i~~~~~~t~~~n~~~~~~------DcP~R---E-R~~W~GD~~~~~~~~~~~~~~~~~~~~~l~~---~~--- 370 (739)
T 3cih_A 307 NDEELNCIWEVGAYTMHLTTREFFI------DGIKR---D-RWVWSGDAIQSYLMNYYLFFDSESVKRTIWL---LR--- 370 (739)
T ss_dssp SCHHHHHHHHHHHHHHHHTBSSSBC------SBSSS---C-CCCCHHHHHHHHHHHHTTTCCHHHHHHHHHH---HH---
T ss_pred ChHHHHHHHHHHHHHHHHhccCCCc------cCccc---c-cceecCchHHHHHHHHHHhCCHHHHHHHHHH---hc---
Confidence 468889999866544432 222232 32111 1 55899999987776443 4788888885421 11
Q ss_pred hhccccCCCCCcccceEEEeeccCCCCCccccccCCccccccccccccccccHHHHHHHHHhhccccchhccc--hhhHH
Q 008801 266 KTVDCYSPGQGLMPASFKVRNVPLESNKFEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGDYALQER--VDVQT 343 (553)
Q Consensus 266 k~ld~~~~g~GlmPASFkV~~~~~~~~~~ee~l~aDFGe~AIGRVapVDSgLWWIILlraY~k~TGD~sla~~--pevQr 343 (553)
|..|.. +.++ ..+|..+||+++++.|.+.|||.++.+. |.+++
T Consensus 371 ----------g~~p~~------------------~~~~-------~~~d~~l~wi~~~~~yy~~tGD~~~L~e~~p~l~~ 415 (739)
T 3cih_A 371 ----------GKDPVT------------------SHSN-------TIMDYTFYWFLSVYDYYMYSGDRHFVNQLYPRMQT 415 (739)
T ss_dssp ----------CCSSCC------------------SSGG-------GBHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
T ss_pred ----------cCCCCc------------------cccC-------CccchhHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 333321 1121 1258899999999999999999999986 88888
Q ss_pred HHHHHHHHhhhcCCCCCCceeecCCccccccc----cccCCCchhHHHHHHHHHHHHHHHhcccCCCCchHHHHHHHHHH
Q 008801 344 GIKLIMNLCLADGFDMFPSLLVTDGSCMIDRR----MGIHGHPLEIQALFYTALRCSREMLTVSDGSGSNNLVRAINNRL 419 (553)
Q Consensus 344 GirlIL~lCL~~~Fd~fPtLlVpDg~~MIDRR----Mgv~G~PLEIQaLfY~ALRca~eLL~~~~~~~~~~~~~~I~~RL 419 (553)
.++++++.. |..+.+....|......+ |.-.|.+.++|+++|.||+++.+|.+.... .+.++.-.++.
T Consensus 416 ~ld~~~~~~-----d~~GL~~~~~G~W~~~dW~d~~~~~~G~~~~~~a~~y~al~~~a~lA~~lG~---~~~A~~y~~~A 487 (739)
T 3cih_A 416 MMDYVLGRT-----NKNGMVEGMSGDWVFVDWADGYLDKKGELSFEQVLFCRSLETMALCADLVGD---KDGQQKYEKLA 487 (739)
T ss_dssp HHHHHHTTB-----CTTSCBCCCTTCBCCSCCCTTCCCCSSEEHHHHHHHHHHHHHHHHHHHHHTC---HHHHHHHHHHH
T ss_pred HHHHHHHhc-----CCCCCcccCCCCcccCCCcccccCCCCcchHHHHHHHHHHHHHHHHHHHcCC---hHHHHHHHHHH
Confidence 887766532 223334433332111122 344788899999999999999999987543 44566677777
Q ss_pred HHHHHhhhhhcccchhhhhhhhccCCcccchhhhcccCcCCCCcchhhhhccCCCCCeeeeeccCCcccchhhhhhhHHH
Q 008801 420 SALSFHIREYYWVDMKKINEIYRYKTEEYSTDATNKFNIYPEQIPSWLMDWIPEEGGYLIGNLQPAHMDFRFFTLGNLWS 499 (553)
Q Consensus 420 ~aLs~hir~yYWlD~~~ln~IyRykTEeYs~~a~NkFNI~pesIP~Wl~dWlp~~GGYliGNl~P~rmDFRfFsLGNllA 499 (553)
..|+.-|+++||-.-+ |+++-....+...-..+..+|++|
T Consensus 488 ~~lk~a~~~~~wd~~~----------------------------------------G~y~~~~~~G~~~d~~~~~s~~la 527 (739)
T 3cih_A 488 SALKAKLEPTFWNNQK----------------------------------------QAFVHNCVDGRQSDAVTRYANMFS 527 (739)
T ss_dssp HHHHHHHHHHHEETTT----------------------------------------TEECSEEETTEECSCCCHHHHHHH
T ss_pred HHHHHHHHHhccCccc----------------------------------------CeeEeecCCCCcCcccchHHhHHH
Confidence 7788888899995421 111101111111112345589999
Q ss_pred HHhcCCCHHHHHHHHHHHH
Q 008801 500 IVSSLGTPKQNESILNLIE 518 (553)
Q Consensus 500 ILssLat~~Qs~aIm~Lie 518 (553)
+++++++++|++++++-+.
T Consensus 528 L~~Gl~~~e~~~~v~~~L~ 546 (739)
T 3cih_A 528 VFFDYLNADKQQAIKQSVL 546 (739)
T ss_dssp HHTTCSCHHHHHHHHHHTT
T ss_pred HHHCCCCHHHHHHHHHHHh
Confidence 9999999999998887663
No 7
>2z07_A Putative uncharacterized protein TTHA0978; uncharacterized conserved protein, structural genomics, NPPSFA; 2.10A {Thermus thermophilus}
Probab=98.60 E-value=1.2e-06 Score=86.86 Aligned_cols=249 Identities=12% Similarity=0.059 Sum_probs=141.3
Q ss_pred HHHHHHHHHHHhhhhhcCceeEEEeecCCCCCCCCCCCceeeccchHHHHHHHhcCChHHHHHHHHhhhh-hchhhhhcc
Q 008801 191 IEKEAWRLLQEAVVTYCESPIGTVAANDPGDKQPLNYDQVFIRDFVPSALAFLLKGEGEIVRNFLLHTLQ-LQSWEKTVD 269 (553)
Q Consensus 191 li~eAwe~l~~siV~y~g~PvGTvAA~D~~~~~alNYdQVFiRDfVPSaLafLl~Ge~eIVRnFL~~tLq-LQs~ek~ld 269 (553)
+.+.|.+.|+.. ..| -++|++. --|..+|.||-...+++++..+..+.++. |...+. .|
T Consensus 4 l~~~a~~~l~~n---~~~--~~~vP~~-------~~f~~~~~wDs~~~~~gl~~~~~~~a~~~-l~~~~~~~q------- 63 (420)
T 2z07_A 4 LRTKAVEVLQRN---SRG--AFTVPAH-------GLYPYQWLWDSAFIALGWTQVDWERAWQE-LLCLFDYGQ------- 63 (420)
T ss_dssp HHHHHHHHHHHH---BCS--SCBCSST-------TCCSCEEHHHHHHHHHHHTTTCHHHHHHH-HHHHHHHHC-------
T ss_pred HHHHHHHHHHHc---CCC--CCcCCCC-------CCCCCccHHHHHHHHHHHHhcCHHHHHHH-HHHHHHHHH-------
Confidence 556666666522 233 2344441 25999999999999998887665555554 443343 44
Q ss_pred ccCCCCCcccceEEEeeccCCCCCccccc-cCC-ccccccccc--cccccccHHHHHHHHHhhcccc----chhccc--h
Q 008801 270 CYSPGQGLMPASFKVRNVPLESNKFEEVL-DPD-FGESAIGRV--APVDSGLWWIILLRAYGKITGD----YALQER--V 339 (553)
Q Consensus 270 ~~~~g~GlmPASFkV~~~~~~~~~~ee~l-~aD-FGe~AIGRV--apVDSgLWWIILlraY~k~TGD----~sla~~--p 339 (553)
-..|.||.-+. +++ ...+. .++ .|..+-+.+ ..+|.-.+++++++.|.+.||| .+|.++ |
T Consensus 64 ---~~~G~ip~~v~--~~~-----~~~y~p~~~~w~~~~~~~~~~~~~~qpP~~~~~~~~~~~~tgD~~~~~~~L~~~~p 133 (420)
T 2z07_A 64 ---GPDGMLPHIVF--HEQ-----SRDYFPGPDVWGREARAQPATSGITQPPVVATVVRYLYEKDPDRDRARERARYLFP 133 (420)
T ss_dssp ---CTTCCCCSEEE--CCS-----CCCCC-----------CCCEECSSCCCCCHHHHHHHHHHHCSCHHHHHHHHHHHHH
T ss_pred ---hhCCCcceecc--cCC-----CcccCcchhhhcccccccCCCCCCcCCcHHHHHHHHHHHhCccchhHHHHHHHHHH
Confidence 24899998653 211 00000 011 111000011 2344556789999999999999 888886 8
Q ss_pred hhHHHHHHHHHHhhhcCCCCCCceeec----CCcccccc-----------------cccc--------------------
Q 008801 340 DVQTGIKLIMNLCLADGFDMFPSLLVT----DGSCMIDR-----------------RMGI-------------------- 378 (553)
Q Consensus 340 evQrGirlIL~lCL~~~Fd~fPtLlVp----Dg~~MIDR-----------------RMgv-------------------- 378 (553)
.+++.++++++--- .+..+.+... +|....-+ |-++
T Consensus 134 ~l~~~~~~~~~~~d---~~~~Gl~~~~~~we~G~~~~~~w~~~~~~~~~~~~~~y~r~d~~~~~~~~~p~~~~~~~~~~~ 210 (420)
T 2z07_A 134 KLLAFHRWLYHARD---PYRTGLVVIVHPWESGMDNSPAWDKPLSRVPVENLPPYERRDVKHVNPEERPRKEDYDRYLSL 210 (420)
T ss_dssp HHHHHHHHHHHHHC---TTCCSCCCBSSGGGGTCTTCGGGHHHHHTCCC-----------CCSCC-------CHHHHHHH
T ss_pred HHHHHHHHHhcCCC---CCCCCceeeecCCCcCCCCCccccccccccCCCCcchhhhhhhhccccccCCcHHHHHHHHHH
Confidence 99999998876531 1222222211 23211100 1111
Q ss_pred --------------------CCCchhHHHHHHHHHHHHHHHhcccCCCCchHHHHHHHHHHHHHHHhhhhhcccchhhhh
Q 008801 379 --------------------HGHPLEIQALFYTALRCSREMLTVSDGSGSNNLVRAINNRLSALSFHIREYYWVDMKKIN 438 (553)
Q Consensus 379 --------------------~G~PLEIQaLfY~ALRca~eLL~~~~~~~~~~~~~~I~~RL~aLs~hir~yYWlD~~~ln 438 (553)
.+.|.++|+++|.|++...+|.+.... +.+++ .++-..++.-|++ ||-+-+.
T Consensus 211 ~~~~~esG~d~s~l~~~~~~~~~~vdlna~~~~~~~~la~la~~lg~-~a~~~----~~~a~~~~~ai~~-~Wd~~~g-- 282 (420)
T 2z07_A 211 LYLFRRLEYDPREIYRQSPFKVVDVGFNAILQRANRDLYALAVLLQE-DPYEI----EEWIVRGEVGLEA-LWDREAG-- 282 (420)
T ss_dssp HHHHHHTTTCHHHHHHHCSCCEECHHHHHHHHHHHHHHHHHHHHTTC-CCHHH----HHHHHHHHHHHHH-TEETTTT--
T ss_pred HHHHHHcCCChhhhcccCCcccCChhHHHHHHHHHHHHHHHHHHhCc-cHHHH----HHHHHHHHHHHHH-hhCcccC--
Confidence 124778999999999999999987543 23333 3333344555667 7743111
Q ss_pred hhhccCCcccchhhhcccCcCCCCcchhhhhccCCCCCeeeeeccCCcccchhhhhhhHHHHHhcCCCHHHHHHHHHHHH
Q 008801 439 EIYRYKTEEYSTDATNKFNIYPEQIPSWLMDWIPEEGGYLIGNLQPAHMDFRFFTLGNLWSIVSSLGTPKQNESILNLIE 518 (553)
Q Consensus 439 ~IyRykTEeYs~~a~NkFNI~pesIP~Wl~dWlp~~GGYliGNl~P~rmDFRfFsLGNllAILssLat~~Qs~aIm~Lie 518 (553)
.|-.-. + +. |... +-++..|++++++++++++|++++++.+.
T Consensus 283 --------~~~d~~------------------~--~~----g~~~------~~~~~~~~~pL~~g~~~~~~a~~v~~~l~ 324 (420)
T 2z07_A 283 --------FYFSWD------------------L--VA----GEPI------AVKTSAGFLPLFAGTPHQGRASLLAQEAE 324 (420)
T ss_dssp --------EECCEE------------------T--TT----TEEC------CCCBGGGGTHHHHTCSCHHHHHHHHHHHH
T ss_pred --------eeEeee------------------C--CC----CCee------ccccHHhHHHHHcCCCCHHHHHHHHHHHH
Confidence 111000 0 00 1111 22478899999999999999999999886
No 8
>2jg0_A Periplasmic trehalase; family 37, hydrolase, inhibitor, glycoside hydrolase, glycosidase, 1-thiatrehazolin; HET: TTZ; 1.50A {Escherichia coli} SCOP: a.102.1.9 PDB: 2jf4_A* 2jjb_A* 2wyn_A*
Probab=98.55 E-value=1.1e-06 Score=92.39 Aligned_cols=223 Identities=14% Similarity=0.212 Sum_probs=142.8
Q ss_pred CCCCceeeccchHHHHHHHhcCChHHHHHHHHhhhhhchhhhhccccCCCCCcccceEEEeeccCCCCCccccccCCccc
Q 008801 225 LNYDQVFIRDFVPSALAFLLKGEGEIVRNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVRNVPLESNKFEEVLDPDFGE 304 (553)
Q Consensus 225 lNYdQVFiRDfVPSaLafLl~Ge~eIVRnFL~~tLqLQs~ek~ld~~~~g~GlmPASFkV~~~~~~~~~~ee~l~aDFGe 304 (553)
--|..+|-||-..++++++..|.+|++|..|...+.+|.. .|.||...+ +-|+
T Consensus 121 g~F~~~~~WDs~f~~~gLl~~~~~~~A~~~l~~~~~~~~~----------~G~IPng~r----------------~yY~- 173 (535)
T 2jg0_A 121 GRFREVYYWDSYFTMLGLAESGHWDKVADMVANFAHEIDT----------YGHIPNGNR----------------SYYL- 173 (535)
T ss_dssp TTBCSCBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH----------HSSCCSBSB----------------GGGT-
T ss_pred ccccccchHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhcc----------CCcccCCCC----------------ccCC-
Confidence 3578899999999999999999999999999999988842 577776311 1221
Q ss_pred cccccccccccccHHHHHHHHHhhccccchhccc--hhhHHHHHHHHHHhhhcCCCCCC-----ceeecCCcccc-----
Q 008801 305 SAIGRVAPVDSGLWWIILLRAYGKITGDYALQER--VDVQTGIKLIMNLCLADGFDMFP-----SLLVTDGSCMI----- 372 (553)
Q Consensus 305 ~AIGRVapVDSgLWWIILlraY~k~TGD~sla~~--pevQrGirlIL~lCL~~~Fd~fP-----tLlVpDg~~MI----- 372 (553)
+| ++.-| ++.+++.|.+.||| +|.++ |.+++.+++.++---. ++ -+ +-..+||..++
T Consensus 174 ---~~---sqPPl-~~~~v~~~~~~~~~-~fL~~~~p~L~~~~~ww~~~~~~--~~-~g~~~~~~~~~~~G~~l~~y~~~ 242 (535)
T 2jg0_A 174 ---SR---SQPPF-FALMVELLAQHEGD-AALKQYLPQMQKEYAYWMDGVEN--LQ-AGQQEKRVVKLQDGTLLNRYWDD 242 (535)
T ss_dssp ---TC---CCSCC-HHHHHHHHHHHHTH-HHHHHHHHHHHHHHHHHTTTCTT--CC-TTEEETTEEECTTSCEEECCCCS
T ss_pred ---CC---CCccH-HHHHHHHHHHcCCH-HHHHHHHHHHHHHHHHHHhCCcc--cC-ccccccceeecCCCCcceeeccC
Confidence 22 23344 77888899899987 66664 8888888876543210 10 00 00012231110
Q ss_pred ------------------------------------------ccccccCC----------CchhHHHHHHHHHHHHHHHh
Q 008801 373 ------------------------------------------DRRMGIHG----------HPLEIQALFYTALRCSREML 400 (553)
Q Consensus 373 ------------------------------------------DRRMgv~G----------~PLEIQaLfY~ALRca~eLL 400 (553)
-|...-.| .|.|+|+++|.|+++..+|.
T Consensus 243 ~~~prpesyr~d~~~~~~~~~~~~~~~y~~~~~~~eSGwD~s~R~~~~~~~l~~~~t~~i~~VDlnA~ly~a~~~la~lA 322 (535)
T 2jg0_A 243 RDTPRPESWVEDIATAKSNPNRPATEIYRDLRSAAASGWDFSSRWMDNPQQLNTLRTTSIVPVDLNSLMFKMEKILARAS 322 (535)
T ss_dssp CCSCCGGGHHHHHHHHHTCTTSCHHHHHHHHHHHHHTTCCSCGGGBSSTTCGGGBCGGGEECHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCcceeehhhhhhccccchhHHHHHHHHHHHhCCCCCccccCCCCCcccccCCccchhhHHHHHHHHHHHHHHHHH
Confidence 11111112 57999999999999999998
Q ss_pred cccCCCCchHHHHHHHHHHHHHHHhhhhhcccchhhhhhhhccCCcccchhhhcccCcCCCCcchhhhhccCCCCCeeee
Q 008801 401 TVSDGSGSNNLVRAINNRLSALSFHIREYYWVDMKKINEIYRYKTEEYSTDATNKFNIYPEQIPSWLMDWIPEEGGYLIG 480 (553)
Q Consensus 401 ~~~~~~~~~~~~~~I~~RL~aLs~hir~yYWlD~~~ln~IyRykTEeYs~~a~NkFNI~pesIP~Wl~dWlp~~GGYliG 480 (553)
+.... .+.+..-.++-..++.-|.++||-+-+.. .|.|
T Consensus 323 ~~lG~---~~~a~~~~~~A~~lk~ai~~~fWdee~G~--y~D~------------------------------------- 360 (535)
T 2jg0_A 323 KAAGD---NAMANQYETLANARQKGIEKYLWNDQQGW--YADY------------------------------------- 360 (535)
T ss_dssp HHHTC---HHHHHHHHHHHHHHHHHHHHHSEETTTTE--ECCE-------------------------------------
T ss_pred HHhCC---hHHHHHHHHHHHHHHHHHHHhCcCCCCCE--EEEE-------------------------------------
Confidence 87533 34455556666666777788888642110 0011
Q ss_pred eccCCcccchhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHhhhhhcCCCce
Q 008801 481 NLQPAHMDFRFFTLGNLWSIVSSLGTPKQNESILNLIEAKWDDLVGHMPLK 531 (553)
Q Consensus 481 Nl~P~rmDFRfFsLGNllAILssLat~~Qs~aIm~Lie~rW~dLvg~MPlK 531 (553)
++..++. -+-++..+++.+++++++++|++++++.+++ +|..+..++
T Consensus 361 ~~~~~~~-~~~~~~s~~~PL~~gi~~~e~a~~v~~~l~~---~l~t~~Glr 407 (535)
T 2jg0_A 361 DLKSHKV-RNQLTAAALFPLYVNAAAKDRANKMATATKT---HLLQPGGLN 407 (535)
T ss_dssp ETTTTEE-CCCCBGGGGHHHHTTCSCHHHHHHHHHHHHH---HTEETTEEC
T ss_pred eCCCCCE-eeeehhhhHHHHhcCCCCHHHHHHHHHHHHH---HhccCCCCC
Confidence 0000110 0447889999999999999999999999974 454444443
No 9
>1lf6_A Glucoamylase; (alpha/alpha) barrel, 6 alpha-helical hairpin torroid, super beta sandwich, carbohydrase family GH15; 2.10A {Thermoanaerobacteriumthermosaccharolyticum} SCOP: a.102.1.5 b.30.5.5 PDB: 1lf9_A*
Probab=98.09 E-value=3.7e-05 Score=82.64 Aligned_cols=157 Identities=17% Similarity=0.128 Sum_probs=112.0
Q ss_pred CCCCceeeccchHHHHHHHhcCChHHHHHHHHhhhhhchhhhhccccCCCCCcccceEEEeeccCCCCCccccccCCccc
Q 008801 225 LNYDQVFIRDFVPSALAFLLKGEGEIVRNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVRNVPLESNKFEEVLDPDFGE 304 (553)
Q Consensus 225 lNYdQVFiRDfVPSaLafLl~Ge~eIVRnFL~~tLqLQs~ek~ld~~~~g~GlmPASFkV~~~~~~~~~~ee~l~aDFGe 304 (553)
=+|.-||+||.+-++++++..|.+|..|.||.-....|.- .|-++..+.+ + ++ |.+|.
T Consensus 335 ~dY~~~W~RD~~~~~~al~~~G~~~~a~~~l~~l~~~q~~----------~G~~~~~~~~-----~---G~----p~w~~ 392 (684)
T 1lf6_A 335 GGYHLVWSRDLYHVANAFIAAGDVDSANRSLDYLAKVVKD----------NGMIPQNTWI-----S---GK----PYWTG 392 (684)
T ss_dssp CGGGSBCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH----------HSSCCSCBCT-----T---SC----BCCCC
T ss_pred CCCEEEeccHHHHHHHHHHHcCCHHHHHHHHHHHHhhcCC----------CCCcccceeC-----C---CC----cccCC
Confidence 3699999999999999999999999999999988888752 2334544421 1 22 33432
Q ss_pred cccccccccccccHHHHHHHHHhhccccchhccchh-hHHHHHHHHHHhhhcCCCCCCceeecCCccccccccccCCCch
Q 008801 305 SAIGRVAPVDSGLWWIILLRAYGKITGDYALQERVD-VQTGIKLIMNLCLADGFDMFPSLLVTDGSCMIDRRMGIHGHPL 383 (553)
Q Consensus 305 ~AIGRVapVDSgLWWIILlraY~k~TGD~sla~~pe-vQrGirlIL~lCL~~~Fd~fPtLlVpDg~~MIDRRMgv~G~PL 383 (553)
.=.|+--.++++++ |...|| .-+. |++++.++++.--.++++. +=...|.-.
T Consensus 393 ------~Q~D~~g~~l~~~~-~~~~~g-----~~~~~v~~al~~i~~~~~~~~~g~---------------WE~~~g~~~ 445 (684)
T 1lf6_A 393 ------IQLDEQADPIILSY-RLKRYD-----LYDSLVKPLADFIIKIGPKTGQER---------------WEEIGGYSP 445 (684)
T ss_dssp ------CCHHHHHHHHHHHH-HTTCGG-----GTTTTHHHHHHHHHHHCSSBSSCT---------------TSSCCBBCH
T ss_pred ------ccccchHHHHHHHH-HHHHcC-----chHHHHHHHHHHHHHhCCCCCccc---------------ccccCCcCH
Confidence 24677778888887 445677 4566 9999999988643333322 222346667
Q ss_pred hHHHHHHHHHHHHHHHhcccCCCCchHHHHHHHHHHHHHHHhhhhhcccc
Q 008801 384 EIQALFYTALRCSREMLTVSDGSGSNNLVRAINNRLSALSFHIREYYWVD 433 (553)
Q Consensus 384 EIQaLfY~ALRca~eLL~~~~~~~~~~~~~~I~~RL~aLs~hir~yYWlD 433 (553)
...+..|.||+++.+|.+...+ .+.++...+.-..|+..|.+++|-.
T Consensus 446 ~t~~~~~~aL~~~a~lA~~~g~---~~~a~~~~~~a~~i~~~i~~~~w~~ 492 (684)
T 1lf6_A 446 ATMAAEVAGLTCAAYIAEQNKD---YESAQKYQEKADNWQKLIDNLTYTE 492 (684)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTC---HHHHHHHHHHHHHHHHHHHHHHEES
T ss_pred HHHHHHHHHHHHHHHHHHHcCC---hHHHHHHHHHHHHHHHHHHHhccCC
Confidence 7788999999999999987433 3455666666667788888999965
No 10
>1ulv_A Glucodextranase; GH family 15, (alpha-alpha)6-barrel, SLH domain, hydrolase; HET: ACR; 2.42A {Arthrobacter globiformis} SCOP: a.102.1.5 b.1.18.2 b.1.9.3 b.30.5.5 PDB: 1ug9_A*
Probab=98.08 E-value=1.7e-05 Score=89.54 Aligned_cols=159 Identities=16% Similarity=0.185 Sum_probs=115.4
Q ss_pred CCCceeeccchHHHHHHHhcCChHHHHHHHHhhhhhchhhhhccccCCCCCcccceEEEeeccCCCCCccccccCCcccc
Q 008801 226 NYDQVFIRDFVPSALAFLLKGEGEIVRNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVRNVPLESNKFEEVLDPDFGES 305 (553)
Q Consensus 226 NYdQVFiRDfVPSaLafLl~Ge~eIVRnFL~~tLqLQs~ek~ld~~~~g~GlmPASFkV~~~~~~~~~~ee~l~aDFGe~ 305 (553)
.|.-||+||.+-++++++..|.+|..|.||.-.+++|.. ..|-++..|.+ + ++ +.+|.
T Consensus 325 gYry~W~RDaa~t~~all~~G~~e~A~~~l~~L~~~Q~~---------~~G~~~~~y~i-----~---G~----~~w~~- 382 (1020)
T 1ulv_A 325 GYHAVWARDMYQSVTALLAAGDEEAAARGVEWLFTYQQQ---------PDGHFPQTSRV-----D---GT----IGQNG- 382 (1020)
T ss_dssp TTCSBCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTCC---------TTSCCCSCBCT-----T---SC----BCCCC-
T ss_pred CCceEccchHHHHHHHHHHcCCHHHHHHHHHHHHHHhcC---------CCCCeeeEEec-----C---CC----cCCCC-
Confidence 499999999999999999999999999999999988842 13555655532 1 21 33431
Q ss_pred ccccccccccccHHHHHHHHHhhccccchhccch-hhHHHHHHHHHHhhhcCCCCCCceeecCCccccccccccCCCchh
Q 008801 306 AIGRVAPVDSGLWWIILLRAYGKITGDYALQERV-DVQTGIKLIMNLCLADGFDMFPSLLVTDGSCMIDRRMGIHGHPLE 384 (553)
Q Consensus 306 AIGRVapVDSgLWWIILlraY~k~TGD~sla~~p-evQrGirlIL~lCL~~~Fd~fPtLlVpDg~~MIDRRMgv~G~PLE 384 (553)
.-.|.--+.+++++.|.+ | |. ..-+ .+++++.+|.+.- | .||- |++-...|+...
T Consensus 383 -----~Q~D~~g~~l~~~~~~~~-~-d~--~~w~~~v~~al~~i~~~g--------~---~~~~----~~WEe~~g~~~~ 438 (1020)
T 1ulv_A 383 -----IQLDETAFPILLANQIGR-T-DA--GFYRNELKPAADYLVAAG--------P---KTPQ----ERWEETGGYSTS 438 (1020)
T ss_dssp -----CBTHHHHHHHHHHHHHTC-C-CH--HHHHHTHHHHHHHHHHHC--------S---CBSB----CTTSSCCBEEHH
T ss_pred -----ccCccchHHHHHHHHHHh-c-CH--HHHHHHHHHHHHHHHHhC--------C---CCCh----hhhcccCCcCHH
Confidence 356999999999999976 4 51 1125 6788888777763 1 2222 235555678888
Q ss_pred HHHHHHHHHHHHHHHhcccCCCCchHHHHHHHHHHHHHHHhhhhhcccc
Q 008801 385 IQALFYTALRCSREMLTVSDGSGSNNLVRAINNRLSALSFHIREYYWVD 433 (553)
Q Consensus 385 IQaLfY~ALRca~eLL~~~~~~~~~~~~~~I~~RL~aLs~hir~yYWlD 433 (553)
..+..|.||+++.+|.+.... .+.+++..+.-..|+..|.+++|-+
T Consensus 439 t~~~~~~AL~~aa~lA~~~G~---~~~a~~w~~~Ad~i~~~i~~~~w~~ 484 (1020)
T 1ulv_A 439 TLASQIAALAAAADIAGKNGD---AGSAAVYRATADEWQRSTEKWMFTT 484 (1020)
T ss_dssp HHHHHHHHHHHHHHHHHHTTC---HHHHHHHHHHHHHHHHTHHHHHEES
T ss_pred HHHHHHHHHHHHHHHHHHcCC---hhHHHHHHHHHHHHHHHHHHhCCCC
Confidence 899999999999999997533 3455666666666788889999975
No 11
>3qry_B Putative uncharacterized protein; alpha-alpha six fold, glycoside hydrolase, mannosidase, 1- deoxymannojirimycin, hydrolase; HET: DMJ; 1.75A {Streptococcus pneumoniae} SCOP: a.102.1.0 PDB: 3qpf_A* 3qsp_A*
Probab=96.75 E-value=0.0094 Score=62.60 Aligned_cols=222 Identities=16% Similarity=0.116 Sum_probs=151.2
Q ss_pred hhhhhcCceeEEEeecCCCCCCCCCCCceeeccch--HHHHHHHhcCChHHHHHHHHhhhhhchhhhhccc----cCCCC
Q 008801 202 AVVTYCESPIGTVAANDPGDKQPLNYDQVFIRDFV--PSALAFLLKGEGEIVRNFLLHTLQLQSWEKTVDC----YSPGQ 275 (553)
Q Consensus 202 siV~y~g~PvGTvAA~D~~~~~alNYdQVFiRDfV--PSaLafLl~Ge~eIVRnFL~~tLqLQs~ek~ld~----~~~g~ 275 (553)
+.|.+++.+--+|..=|= +--|+||-. -....-|++.++++ ++.+.-.+.+|..--.+|- |+++.
T Consensus 39 Ttv~~~~~~~tFviTGDI--------~AmWLRDS~~Ql~pY~~l~~~d~~l-~~li~G~I~rQ~~~i~~dPYaNAF~~~~ 109 (426)
T 3qry_B 39 NTVEILEDGSTFVLTGDI--------PAMWLRDSTAQLRPYLHVAKRDALL-RQTIAGLVKRQMTLVLKDPYANSFNIEE 109 (426)
T ss_dssp HSEEECTTSCEEECSSSS--------SEEEHHHHHHHHGGGHHHHTTCHHH-HHHHHHHHHHHHHHHHHCTTCSEEESSS
T ss_pred heeEecCCCCEEEEeCCC--------cchhhccCHHHHHHhHHHhccCHHH-HHHHHHHHHHHHHHhccCcccccCCCCC
Confidence 567888877777777443 236999976 44456678899998 7778889999987555554 33321
Q ss_pred -CcccceEEEeeccCCCCCccccccCCccccccccccccccccHHHHHHHHHhhccccchhccchhhHHHHHHHHHHhhh
Q 008801 276 -GLMPASFKVRNVPLESNKFEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGDYALQERVDVQTGIKLIMNLCLA 354 (553)
Q Consensus 276 -GlmPASFkV~~~~~~~~~~ee~l~aDFGe~AIGRVapVDSgLWWIILlraY~k~TGD~sla~~pevQrGirlIL~lCL~ 354 (553)
|- .+ . +.=.+++...--.|=--+||-=..+-|.+.|.+.|||.++... +..+|++.||+....
T Consensus 110 ~~~---~~----~--------~~d~t~~~~~v~E~KyElDSL~~~l~La~~y~~~Tgd~~~f~~-~w~~a~~~il~~~~~ 173 (426)
T 3qry_B 110 NWK---GH----H--------ETDHTDLNGWIWERKYEVDSLCYPLQLAYLLWKETGETSQFDE-IFVAATKEILHLWTV 173 (426)
T ss_dssp CCC---SS----T--------TTEESCCCTTEEECCCCHHHHHHHHHHHHHHHHHHCCCTTCSH-HHHHHHHHHHHHHHH
T ss_pred CCC---Cc----c--------CCCCCCCCCeeEeeccHHhhhHHHHHHHHHHHHhhCChhhhhH-HHHHHHHHHHHHHHH
Confidence 10 00 0 0001112222233344689999999999999999999999865 999999999998876
Q ss_pred cC-CCCCCceeecCC------------------ccccc---c---ccccCCCchhHHHHHHHHHHHHHHHhcc--cCCCC
Q 008801 355 DG-FDMFPSLLVTDG------------------SCMID---R---RMGIHGHPLEIQALFYTALRCSREMLTV--SDGSG 407 (553)
Q Consensus 355 ~~-Fd~fPtLlVpDg------------------~~MID---R---RMgv~G~PLEIQaLfY~ALRca~eLL~~--~~~~~ 407 (553)
+. -+..|=-+.=+. .-||- | ---+||+-+--++++-.||+.+.+|+.. ..+
T Consensus 174 eq~~~~s~Y~f~R~t~~~tdtl~~~G~G~pv~~tGli~S~FRPSDDa~~~~~~iPsN~~~~v~L~~~aei~~~~~v~~-- 251 (426)
T 3qry_B 174 EQDHKNSPYRFVRDTDRKEDTLVNDGFGPDFAVTGMTWSAFRPSDDCCQYSYLIPSNMFAVVVLGYVQEIFAALNLAD-- 251 (426)
T ss_dssp TTSGGGCCCCCEECCSCGGGSCHHHHTCSCCCCCSSCCCSBCTTSSBCSSSEEHHHHHHHHHHHHHHHHHHHHHTCTT--
T ss_pred HhccCCCCceeeecCCCCCccccCCCCCCCcCCCCceecCCCCCCcccccCCCcHHHHHHHHHHHHHHHHHHhccccC--
Confidence 43 221111111000 01110 1 1237889899999999999999999973 223
Q ss_pred chHHHHHHHHHHHHHHHhhhhhcccchhhhhhhhccCCcccch
Q 008801 408 SNNLVRAINNRLSALSFHIREYYWVDMKKINEIYRYKTEEYST 450 (553)
Q Consensus 408 ~~~~~~~I~~RL~aLs~hir~yYWlD~~~ln~IyRykTEeYs~ 450 (553)
.+++++...+.-..++.=|.+|-.++..+-..||.|-...||.
T Consensus 252 d~~la~~~~~la~eIr~~I~k~gvv~h~~~g~iyAyEVDG~Gs 294 (426)
T 3qry_B 252 SQSVIADAKRLQDEIQEGIKNYAYTTNSKGEKIYAFEVDGLGN 294 (426)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSEEECTTCCEEECSEECSSSC
T ss_pred cHHHHHHHHHHHHHHHHHHHHhcEecCCCcceEEEEEeccCCC
Confidence 4557777776666778888999999988888999999999998
No 12
>3p2c_A Putative glycosyl hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE PGE; 1.60A {Bacteroides ovatus} SCOP: a.102.1.8 PDB: 3on6_A*
Probab=96.58 E-value=0.0052 Score=65.05 Aligned_cols=223 Identities=16% Similarity=0.190 Sum_probs=147.7
Q ss_pred hhhhhcC----ceeEEEeecCCCCCCCCCCCceeeccchHHHHHH--HhcCChHHHHHHHHhhhhhchhhhhcc----cc
Q 008801 202 AVVTYCE----SPIGTVAANDPGDKQPLNYDQVFIRDFVPSALAF--LLKGEGEIVRNFLLHTLQLQSWEKTVD----CY 271 (553)
Q Consensus 202 siV~y~g----~PvGTvAA~D~~~~~alNYdQVFiRDfVPSaLaf--Ll~Ge~eIVRnFL~~tLqLQs~ek~ld----~~ 271 (553)
+.|++++ .|--+|..=|= +--|+||-+--..-+ |++.++++ ++.+.-.+.+|..--.+| +|
T Consensus 64 TTv~~~~~~~~~~~tFviTGDI--------~AmWLRDS~~Q~~pYl~l~~~d~~l-~~li~G~I~rQ~~~i~~dPYaNAF 134 (463)
T 3p2c_A 64 TTVHFRKGSDGKPDTFVYTGDI--------HAMWLRDSGAQVWPYVQLANSDPEL-KEMLAGVILRQFKCINIDPYANAF 134 (463)
T ss_dssp HTEEEEECTTSCEEEEECCBSS--------CSEEHHHHHHHTGGGGGGGGGCHHH-HHHHHHHHHHHHHHHHHCTTCSEE
T ss_pred hheeeeccCCCCCCEEEEeCCC--------cchhcccCHHHHHHHHHHhccCHHH-HHHHHHHHHHHHHHhccCcccccc
Confidence 3455543 56666666443 236999965544433 47889988 777888999998755554 45
Q ss_pred CCCCCcccceEEEeeccCCCCCccccccCCccccccccccccccccHHHHHHHHHhhccccchhccchhhHHHHHHHHHH
Q 008801 272 SPGQGLMPASFKVRNVPLESNKFEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGDYALQERVDVQTGIKLIMNL 351 (553)
Q Consensus 272 ~~g~GlmPASFkV~~~~~~~~~~ee~l~aDFGe~AIGRVapVDSgLWWIILlraY~k~TGD~sla~~pevQrGirlIL~l 351 (553)
+++. .|-. .+. . ....+.| .--.|=--+||-=..+-|.+.|.+.|||.++.. .+..+|++.||+.
T Consensus 135 ~~~~----~sg~-~~~----~-d~t~~~p----~v~ErKyElDSL~~~l~La~~y~~~Tgd~~~f~-~~w~~a~~~il~~ 199 (463)
T 3p2c_A 135 NDGA----IPDG-HWM----S-DLTDMKP----ELHERKWEIDSLCYPLRLAYHYWKTTGDASIFN-EEWIQAITNVLKT 199 (463)
T ss_dssp CSSC----CTTC-TTT----T-SBSCCCT----TEEECCCCHHHHHHHHHHHHHHHHHHCCCTTCS-HHHHHHHHHHHHH
T ss_pred CCCC----CCCC-ccc----C-CCCCCCC----cEEEEecHhhhhhHHHHHHHHHHHhhCChhhhc-HHHHHHHHHHHHH
Confidence 5432 1110 000 0 0101112 122233567999999999999999999999995 5999999999998
Q ss_pred hhhc-CCC-CCCceeecC------------------Cccccc---c---ccccCCCchhHHHHHHHHHHHHHHHhcccCC
Q 008801 352 CLAD-GFD-MFPSLLVTD------------------GSCMID---R---RMGIHGHPLEIQALFYTALRCSREMLTVSDG 405 (553)
Q Consensus 352 CL~~-~Fd-~fPtLlVpD------------------g~~MID---R---RMgv~G~PLEIQaLfY~ALRca~eLL~~~~~ 405 (553)
...+ +=+ ..|=-+.=+ ..-||- | -.-+||+-+--++++..+|+.+.+|+....+
T Consensus 200 ~~~~q~~~~~s~Y~f~R~t~~~tdtl~~~G~G~pv~~tGli~S~FRPSDDa~~~~~~iPsN~~a~v~L~~aaei~~~l~~ 279 (463)
T 3p2c_A 200 FKEQQRKDGVGPYKFQRKTERALDTVSNDGLGAPVKPVGLIVSSFRPSDDATTLQFLVPSNFFAVSSLRKAAEILEKVNK 279 (463)
T ss_dssp HHHTTCSSSSCSCCCBCCBSCGGGSCHHHHTCSCCCCSSCCBCSBCTTSCBCSSSEEHHHHHHHHHHHHHHHHHHHHTSC
T ss_pred HHHHhccCCCCCceEeecCCCCCcccCCCCcCCCcCCCCceecCCCCCCcccccCCCcHHHHHHHHHHHHHHHHHHHhcc
Confidence 7753 222 111111100 011110 1 1237888899999999999999999986544
Q ss_pred CCchHHHHHHHHHHHHHHHhhhhhcccchhhhhhhhccCCcccch
Q 008801 406 SGSNNLVRAINNRLSALSFHIREYYWVDMKKINEIYRYKTEEYST 450 (553)
Q Consensus 406 ~~~~~~~~~I~~RL~aLs~hir~yYWlD~~~ln~IyRykTEeYs~ 450 (553)
.+++++...+.-..++.=|.+|-+++..+-..||.|-...||.
T Consensus 280 --d~~la~~~~~lA~eIr~gI~k~gvv~~p~~G~iyAyEVDG~Gs 322 (463)
T 3p2c_A 280 --KTALSKECKDLAQEVETALKKYAVYNHPKYGKIYAFEVDGFGN 322 (463)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHSEEEETTTEEEECSEECSSSC
T ss_pred --CHHHHHHHHHHHHHHHHHHHHhCEecCCCCceEEEEEEecCCC
Confidence 4567777777777788888999999887777899999999997
No 13
>3qt9_A Putative uncharacterized protein CPE0426; alpha-alpha six fold, glycoside hydrolase, mannosidase, HYDR; HET: YDR; 2.05A {Clostridium perfringens} SCOP: a.102.1.8 PDB: 3qt3_A* 2nvp_A
Probab=96.42 E-value=0.0089 Score=62.78 Aligned_cols=221 Identities=16% Similarity=0.109 Sum_probs=148.2
Q ss_pred hhhhhcCceeEEEeecCCCCCCCCCCCceeeccch--HHHHHHHhcCChHHHHHHHHhhhhhchhhhhcc----ccCCCC
Q 008801 202 AVVTYCESPIGTVAANDPGDKQPLNYDQVFIRDFV--PSALAFLLKGEGEIVRNFLLHTLQLQSWEKTVD----CYSPGQ 275 (553)
Q Consensus 202 siV~y~g~PvGTvAA~D~~~~~alNYdQVFiRDfV--PSaLafLl~Ge~eIVRnFL~~tLqLQs~ek~ld----~~~~g~ 275 (553)
+.|++ +.|--+|..=|= +--|+||-+ -....-|++.++++. ..+.-.+.+|..--.+| +|+++.
T Consensus 42 Ttv~~-~~~~tFviTGDI--------~AmWLRDS~~Ql~pY~~l~~~d~~l~-~li~G~I~rQ~~~i~~dPYaNAF~~~~ 111 (427)
T 3qt9_A 42 TTVEV-SEGDAFVITGDI--------PAMWLRDSTSQVEHYLPFVKEYPELK-AIFTGLINRQVKCIFIDPYANAFNKEP 111 (427)
T ss_dssp HTEEE-ETTEEEECCBSS--------CSEEHHHHHHHTGGGGGGTTTCGGGH-HHHHHHHHHHHHHHHHCTTCSEECSSS
T ss_pred heeEe-CCCCEEEEeCCC--------cchhhccCHHHHhhhHHHhccCHHHH-HHHHHHHHHHHHHhccCcccccCCCCC
Confidence 45666 667777776453 236999965 333445678888876 66778888888755544 344421
Q ss_pred CcccceEEEeeccCCCCCccccccCCccccccccccccccccHHHHHHHHHhhccccchhccchhhHHHHHHHHHHhhhc
Q 008801 276 GLMPASFKVRNVPLESNKFEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGDYALQERVDVQTGIKLIMNLCLAD 355 (553)
Q Consensus 276 GlmPASFkV~~~~~~~~~~ee~l~aDFGe~AIGRVapVDSgLWWIILlraY~k~TGD~sla~~pevQrGirlIL~lCL~~ 355 (553)
.+= .+. . . .++....--.|=--+||-=..+-|.+.|.+.|||.++.. ++..+|++.||+....+
T Consensus 112 ----~~~--~~~----~-d----~t~~~~~v~ErKyElDSL~~~l~La~~y~~~Tgd~~~f~-~~w~~a~~~il~~~~~~ 175 (427)
T 3qt9_A 112 ----NGQ--KWD----N-D----ITKDSPWVWERKYEIDSLCYPVRLIHKYWKESGDETFFN-YDIKKAFNMIIDLWRVE 175 (427)
T ss_dssp ----CCC--CSS----C-C----BSCCCTTEEECCCCTHHHHHHHHHHHHHHHHHCCCTTCC-HHHHHHHHHHHHHHHHG
T ss_pred ----CCc--CcC----C-C----CCCCCCceEeeccHHhhhHHHHHHHHHHHHhhCChhhhh-HHHHHHHHHHHHHHHHH
Confidence 110 000 0 0 112222233344468999999999999999999999996 69999999999887665
Q ss_pred C--CCCCCceee----------c-C-------Cccccc---c---ccccCCCchhHHHHHHHHHHHHHHHhcccCCCCch
Q 008801 356 G--FDMFPSLLV----------T-D-------GSCMID---R---RMGIHGHPLEIQALFYTALRCSREMLTVSDGSGSN 409 (553)
Q Consensus 356 ~--Fd~fPtLlV----------p-D-------g~~MID---R---RMgv~G~PLEIQaLfY~ALRca~eLL~~~~~~~~~ 409 (553)
. ....|=-+. + | ..-||- | ---+||+-+--++++-.||+.+.+|+....+ .+
T Consensus 176 q~~~~~s~Y~f~R~t~~~tdtl~~~G~G~pv~~tGli~S~FRPSDDa~~~~~~iPsN~~a~vaL~~~aei~~~l~~--d~ 253 (427)
T 3qt9_A 176 QYHREKSDYSFQRLNCSVTDTLSHEGLGTPVTYTGMTWSGFRPSDDACEYGYLIPANMFAVVALRYISEIAEKVYK--DE 253 (427)
T ss_dssp GGHHHHCCCCCBCSSSCGGGSCHHHHTCSCCCCCSSCCCSBCTTSCBCSSSEEHHHHHHHHHHHHHHHHHHHHTSC--CH
T ss_pred hccCCCCCceEeccCCCCCccccCCCCCCCcCCCCceecCCCCCCcccccCCCcHHHHHHHHHHHHHHHHHHHhcc--CH
Confidence 4 111111110 0 0 001110 1 1237889899999999999999999986544 45
Q ss_pred HHHHHHHHHHHHHHHhhhhhcccchhhhhhhhccCCcccch
Q 008801 410 NLVRAINNRLSALSFHIREYYWVDMKKINEIYRYKTEEYST 450 (553)
Q Consensus 410 ~~~~~I~~RL~aLs~hir~yYWlD~~~ln~IyRykTEeYs~ 450 (553)
++++...+.-..++.=|.+|-.++..+-..||.|-...||.
T Consensus 254 ~La~~~~~la~eIr~aI~k~gvv~~p~~G~iyAyEVDG~Gs 294 (427)
T 3qt9_A 254 ELKEKADSLREEIDNAIEKHGKVYKEGFGEVYAYETDGMGN 294 (427)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSEEEETTTEEEECSEECSSSC
T ss_pred HHHHHHHHHHHHHHHHHHHhcEecCCCcceEEEEEeccCCC
Confidence 67777777777788888999999987788999999999998
No 14
>2p0v_A Hypothetical protein BT3781; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.10A {Bacteroides thetaiotaomicron vpi-5482} SCOP: a.102.1.8
Probab=96.02 E-value=0.016 Score=61.79 Aligned_cols=225 Identities=17% Similarity=0.156 Sum_probs=142.5
Q ss_pred hhhhhcCceeEEEeecCCCCCCCCCCCceeeccchHHHHH--HHhcCChHHHHHHHHhhhhhchhhhhccccCCCCCccc
Q 008801 202 AVVTYCESPIGTVAANDPGDKQPLNYDQVFIRDFVPSALA--FLLKGEGEIVRNFLLHTLQLQSWEKTVDCYSPGQGLMP 279 (553)
Q Consensus 202 siV~y~g~PvGTvAA~D~~~~~alNYdQVFiRDfVPSaLa--fLl~Ge~eIVRnFL~~tLqLQs~ek~ld~~~~g~GlmP 279 (553)
+-|.+.|.|-=+|..=|= +--|+||-.--..- .|++.++++ ++-+.-.++.|..--.+|-|--.- .-|
T Consensus 86 Ttv~~~~~~~tfViTGDI--------~AmWLRDS~~Q~~pYl~l~~~d~~l-~~li~G~i~rq~~~i~~dPYaNAF-~~~ 155 (489)
T 2p0v_A 86 TTVHFDGKEDTFVYTGDI--------HAMWLRDSGAQVWPYVQLANKDPEL-KKMLAGVINRQFKCINIDPYANAF-NMN 155 (489)
T ss_dssp HTEEECSSSCEEECCBSS--------SSEEHHHHHHHSGGGGGGGGGCHHH-HHHHHHHHHHHHHHHHHCTTCSEE-CSS
T ss_pred hheeeCCCCCEEEEeCCc--------cchhhcccHHHHHHHHHHhccCHHH-HHHHHHHHHHHHHHhccCcccccc-CCC
Confidence 445667777666665333 23588996544332 346778888 777888888888766655443100 001
Q ss_pred ceEEEeeccCCCCCccccccCCccccccccccccccccHHHHHHHHHhhccccchhccchhhHHHHHHHHHHhhhcCCCC
Q 008801 280 ASFKVRNVPLESNKFEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGDYALQERVDVQTGIKLIMNLCLADGFDM 359 (553)
Q Consensus 280 ASFkV~~~~~~~~~~ee~l~aDFGe~AIGRVapVDSgLWWIILlraY~k~TGD~sla~~pevQrGirlIL~lCL~~~Fd~ 359 (553)
+.-.. +.. ....+.|- --.|=--+||-=--|-|++.|.+.|||.++... ...++|+.|++....+--+.
T Consensus 156 ~~~~~-~~~-----d~t~~~P~----v~E~KyElDSla~~L~la~~Yy~~TgD~~~f~~-~w~~av~~il~~l~~eq~~~ 224 (489)
T 2p0v_A 156 SEGGE-WMS-----DLTDMKPE----LHERKWEIDSLCYPIRLAYHYWKTTGDASVFSD-EWLQAIANVLKTFKEQQRKD 224 (489)
T ss_dssp SCCCG-GGG-----SSSCCCTT----EEECCCCHHHHHHHHHHHHHHHHHHCCCTTSSH-HHHHHHHHHHHHHHHTTCSS
T ss_pred CCCCC-CCC-----CCCCCCcc----cccccchhhhhHHHHHHHHHHHHHhCCchhhHH-HHHHHHHHHHHHHHHHhccc
Confidence 11110 000 01112221 011112578888889999999999999999965 89999999999887622221
Q ss_pred -------C------------------C---ceeecCCccccccccccCCCchhHHHHHHHHHHHHHHHhcccCCCCchHH
Q 008801 360 -------F------------------P---SLLVTDGSCMIDRRMGIHGHPLEIQALFYTALRCSREMLTVSDGSGSNNL 411 (553)
Q Consensus 360 -------f------------------P---tLlVpDg~~MIDRRMgv~G~PLEIQaLfY~ALRca~eLL~~~~~~~~~~~ 411 (553)
| | |=|+--|=-==|.- -+|||=+.-.+..|.+|+.+.+|++...+ .+++
T Consensus 225 ~~~~~Y~F~r~t~~~~dtl~~~G~G~pv~~tGLi~S~fRPSDDa-~~yg~~ipSN~~a~v~L~~aaeia~~v~~--d~~l 301 (489)
T 2p0v_A 225 DAKGPYRFQRKTERALDTMTNDGWGNPVKPVGLIASAFRPSDDA-TTFQFLVPSNFFAVTSLRKAAEILNTVNR--KPAL 301 (489)
T ss_dssp CSSCSCCCCCCBSCGGGSCHHHHTCSCCCCSSCCCCSBCTTSCB-CSSSEEHHHHHHHHHHHHHHHHHHHHTSC--CHHH
T ss_pred CCCCCceEeecCCCcccccccCCCCCccCCCCceeCCCCCCCcc-hhcCcchHHHHHHHHHHHHHHHHHHHhcc--CHHH
Confidence 1 1 11110000000111 35899999999999999999999986544 3556
Q ss_pred HHHHHHHHHHHHHhhhhhcccchhhhhhhhccCCcccch
Q 008801 412 VRAINNRLSALSFHIREYYWVDMKKINEIYRYKTEEYST 450 (553)
Q Consensus 412 ~~~I~~RL~aLs~hir~yYWlD~~~ln~IyRykTEeYs~ 450 (553)
+++..+.-..++.=|.+|-|++..+-..||.|-...||.
T Consensus 302 a~~~~~lA~eI~~gI~~~gv~~~p~~G~ifAyEVDG~G~ 340 (489)
T 2p0v_A 302 AKECTALADEVEKALKKYAVCNHPKYGKIYAFEVDGFGN 340 (489)
T ss_dssp HHHHHHHHHHHHHHHHHHSEEEETTTEEEECSEECSSSC
T ss_pred HHHHHHHHHHHHHHHHHhCEecCCCCccEEEEEecCCCC
Confidence 666666666677778889999876677799999999986
No 15
>2vn4_A Glucoamylase; hydrolase, carbohydrate binding, glycoside hydrolase family 15, amyloglucosidase; HET: MAN NAG BTB; 1.85A {Hypocrea jecorina} PDB: 2vn7_A*
Probab=95.18 E-value=0.099 Score=56.23 Aligned_cols=185 Identities=15% Similarity=0.156 Sum_probs=97.9
Q ss_pred cCceeEEEeecCCCCCCCCCCCceeeccchHHHHHHH----hcCChHHHHHHHHhhh---hhchhhhhccccCC-CCCcc
Q 008801 207 CESPIGTVAANDPGDKQPLNYDQVFIRDFVPSALAFL----LKGEGEIVRNFLLHTL---QLQSWEKTVDCYSP-GQGLM 278 (553)
Q Consensus 207 ~g~PvGTvAA~D~~~~~alNYdQVFiRDfVPSaLafL----l~Ge~eIVRnFL~~tL---qLQs~ek~ld~~~~-g~Glm 278 (553)
.|.|-|.|.|.-.. .. -+|.=||+||.+-++.+++ ..|..+..+.|+.-.. .||.+ +..|..-+ ++|+-
T Consensus 29 ~~~~tGaiIAsptt-s~-pDYrY~W~RDaa~t~~aL~~~~~~~G~~~~a~~~~~~l~~~~~lQ~~-y~~~G~~~~~~~l~ 105 (599)
T 2vn4_A 29 FGTSAGAVIASPST-ID-PDYYYMWTRDSALVFKNLIDRFTETYDAGLQRRIEQYITAQVTLQGL-SNPSGSLADGSGLG 105 (599)
T ss_dssp TTSCTTCBCSCSCC-SS-SCCCSEEHHHHHHHHHHHHHHHHHSBCHHHHHHHHHHHHHHHHHHHC-CBTTBCSTTSGGGG
T ss_pred CCCCCceEEEECCC-CC-CCCeEEchhhHHHHHHHHHHHHHhCCCHHHHHHHHHHHhcccceeee-eCCCCCcccccCcC
Confidence 45567777664221 12 2799999999999999999 8898877766655554 46654 23333221 11332
Q ss_pred cceEEEeeccCCCCCccccccCCcccccccccccccc-----ccHHHHHHHHHhhccccchhcc---chhhHHHHHHHHH
Q 008801 279 PASFKVRNVPLESNKFEEVLDPDFGESAIGRVAPVDS-----GLWWIILLRAYGKITGDYALQE---RVDVQTGIKLIMN 350 (553)
Q Consensus 279 PASFkV~~~~~~~~~~ee~l~aDFGe~AIGRVapVDS-----gLWWIILlraY~k~TGD~sla~---~pevQrGirlIL~ 350 (553)
..-|.| + +.. | ..+=||+ =-|. -=.++.+.+ | ..+||..+.. .+-+++.+..+.+
T Consensus 106 E~~~~l-----d---G~~-----~-~~~w~~~-Q~D~~glr~~~~~~~~~~-~-~~~g~~~~~~~~~w~~v~~~l~~v~~ 168 (599)
T 2vn4_A 106 EPKFEL-----T---LKP-----F-TGNWGRP-QRDGPALRAIALIGYSKW-L-INNNYQSTVSNVIWPIVRNDLNYVAQ 168 (599)
T ss_dssp CCEECT-----T---SCB-----C-CSCCSCC-CTHHHHHHHHHHHHHHHH-H-HHTTCHHHHHHHTHHHHHHHHHHHHH
T ss_pred ceEEec-----C---Ccc-----c-cCcCCCe-eccccchhHHHHHHHHHH-H-HHhCCcccccHHHHHHHHHHHHHHHH
Confidence 233421 1 111 0 1122331 1122 114455555 4 4678876553 2555555555544
Q ss_pred HhhhcCCCCCCceeecCCccccccccccCCCchhHHHHHHHHHHHHHHHhcccCCCCchHHHHHHHHHHHHHHHhhhhhc
Q 008801 351 LCLADGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQALFYTALRCSREMLTVSDGSGSNNLVRAINNRLSALSFHIREYY 430 (553)
Q Consensus 351 lCL~~~Fd~fPtLlVpDg~~MIDRRMgv~G~PLEIQaLfY~ALRca~eLL~~~~~~~~~~~~~~I~~RL~aLs~hir~yY 430 (553)
.=-.++||.. ..| .|+-..--+--+.||+|+.+|.+....+ .. .-+....+ +...| +++
T Consensus 169 ~w~~~d~dlW------------Eer---~g~~~~T~~~~~~aL~~aa~lA~~~g~~-~~-~w~~~ad~---i~~~i-~~~ 227 (599)
T 2vn4_A 169 YWNQTGFDLW------------EEV---NGSSFFTVANQHRALVEGATLAATLGQS-GS-AYSSVAPQ---VLCFL-QRF 227 (599)
T ss_dssp HTTSCEECTT------------SCC---EEEEHHHHHHHHHHHHHHHHHHHHHTCC-CH-HHHHHHHH---HHHHH-GGG
T ss_pred hCCCCCCCee------------eec---CCcchHHHHHHHHHHHHHHHHHHHcCCC-HH-HHHHHHHH---HHHHH-Hhh
Confidence 4433333222 122 3444455677889999999998875431 22 22233333 34455 667
Q ss_pred cc
Q 008801 431 WV 432 (553)
Q Consensus 431 Wl 432 (553)
|-
T Consensus 228 w~ 229 (599)
T 2vn4_A 228 WV 229 (599)
T ss_dssp EE
T ss_pred cC
Confidence 74
No 16
>2fba_A Glucoamylase Glu1; (alpha-alpha)6 barrel, TRIS, hydrolase; 1.10A {Saccharomycopsis fibuligera} SCOP: a.102.1.1 PDB: 1ayx_A* 2f6d_A
Probab=95.08 E-value=0.072 Score=56.01 Aligned_cols=191 Identities=16% Similarity=0.187 Sum_probs=105.7
Q ss_pred cCceeEEEeecCCCCCCCCCCCceeeccchHHHHHHHhcCC--------hHHHHHHHHhhhhhchhhhhccccC--CCCC
Q 008801 207 CESPIGTVAANDPGDKQPLNYDQVFIRDFVPSALAFLLKGE--------GEIVRNFLLHTLQLQSWEKTVDCYS--PGQG 276 (553)
Q Consensus 207 ~g~PvGTvAA~D~~~~~alNYdQVFiRDfVPSaLafLl~Ge--------~eIVRnFL~~tLqLQs~ek~ld~~~--~g~G 276 (553)
.+.|-|.|.|.-... .-+|.=||+||.+-++.+++..|. .+.++.|+.-...||.....-..++ .+.|
T Consensus 45 ~~~~~GaiIASptts--npDYrY~W~RDaa~t~~aL~~~g~~~~~~~~l~~~a~~y~~~~~~lq~~~~~~G~~~~~~~~g 122 (492)
T 2fba_A 45 NNGVPGTVIASPSTS--NPDYYYQWTRDSAITFLTVLSELEDNNFNTTLAKAVEYYINTSYNLQRTSNPSGSFDDENHKG 122 (492)
T ss_dssp TTSCTTCBCSCSCBS--SSBCCSEEHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHTSCBTTBCTTSGGGGG
T ss_pred CCCCCCeEEEeCCCC--CCCCeEEccchHHHHHHHHHHhCcccccccchHHHHHHHHHHHHHHhcccCCCCCcCcccccc
Confidence 556678776642211 236999999999999999999998 9999999997655554322101111 0112
Q ss_pred cccceEEEeeccCCCCCccccccCCccccccccccccccccHHHHHHHHHhhccccchhc---------------c---c
Q 008801 277 LMPASFKVRNVPLESNKFEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGDYALQ---------------E---R 338 (553)
Q Consensus 277 lmPASFkV~~~~~~~~~~ee~l~aDFGe~AIGRVapVDSgLWWIILlraY~k~TGD~sla---------------~---~ 338 (553)
+--.-|.| + ++..+ +.. || .=-|.-=.-+++++.|.+...+.... . .
T Consensus 123 lgep~y~v-----d---G~~~~-~~w-----~~-~Q~D~~g~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (492)
T 2fba_A 123 LGEPKFNT-----D---GSAYT-GAW-----GR-PQNDGPALRAYAISRYLNDVNSLNEGKLVLTDSGDINFSSTEDIYK 187 (492)
T ss_dssp GGCCEECT-----T---SCBCC-SCC-----SC-CBTTHHHHHHHHHHHHHHHHHHHSTTCCSSTTCTTCSCSSHHHHHH
T ss_pred cCceeecc-----C---CCcCC-ccc-----CC-ccccchhHHHHHHHHHHHHhhccccchhhhhhhccccccccHHHHH
Confidence 22235532 1 11111 122 22 12344446677777776655444321 1 1
Q ss_pred hhhHHHHHHHHHHhhhcCCCCCCceeecCCccccccccccCCCchhHHHHHHHHHHHHHHHhcccCCCCchHHHHHHHHH
Q 008801 339 VDVQTGIKLIMNLCLADGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQALFYTALRCSREMLTVSDGSGSNNLVRAINNR 418 (553)
Q Consensus 339 pevQrGirlIL~lCL~~~Fd~fPtLlVpDg~~MIDRRMgv~G~PLEIQaLfY~ALRca~eLL~~~~~~~~~~~~~~I~~R 418 (553)
+-+++.+..+.+.=-.++||. +=-..|+-..--+--+.||.++..|.+.... .+.++...+.
T Consensus 188 ~~i~~~l~~v~~~w~~pd~dl---------------WEer~g~~~~T~~~~~~AL~~aa~lA~~~g~---~~~a~~w~~~ 249 (492)
T 2fba_A 188 NIIKPDLEYVIGYWDSTGFDL---------------WEENQGRHFFTSLVQQKALAYAVDIAKSFDD---GDFANTLSST 249 (492)
T ss_dssp HTHHHHHHHHHHHTTSCEECT---------------TSCCEECCHHHHHHHHHHHHHHHHHHHHTTC---HHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCCCC---------------cCccCCCChHHHHHHHHHHHHHHHHHHHcCC---chHHHHHHHH
Confidence 334444444333332333332 2222355556677788999999999887432 3344444444
Q ss_pred HHHHHHhhhhh---ccc
Q 008801 419 LSALSFHIREY---YWV 432 (553)
Q Consensus 419 L~aLs~hir~y---YWl 432 (553)
-..+...|.++ +|-
T Consensus 250 ad~i~~~I~~~~~~~w~ 266 (492)
T 2fba_A 250 ASTLESYLSGSDGGFVN 266 (492)
T ss_dssp HHHHHHHHHSTTTCCEE
T ss_pred HHHHHHHHHHhhhcCCC
Confidence 45566667666 774
No 17
>1gai_A Glucoamylase-471; hydrolase, glycosidase, polysaccharide degradation, glycoPro; HET: MAN NAG BMA GAC; 1.70A {Aspergillus awamori} SCOP: a.102.1.1 PDB: 1gah_A* 3gly_A* 1dog_A* 1glm_A* 1agm_A* 3eqa_A*
Probab=94.57 E-value=0.11 Score=54.59 Aligned_cols=154 Identities=14% Similarity=0.121 Sum_probs=86.0
Q ss_pred cCceeEEEeec-CCCCCCCCCCCceeeccchHHHHHHH---hcCC---hHHHHHHHHhhhhhchhhhhccccCCCCCccc
Q 008801 207 CESPIGTVAAN-DPGDKQPLNYDQVFIRDFVPSALAFL---LKGE---GEIVRNFLLHTLQLQSWEKTVDCYSPGQGLMP 279 (553)
Q Consensus 207 ~g~PvGTvAA~-D~~~~~alNYdQVFiRDfVPSaLafL---l~Ge---~eIVRnFL~~tLqLQs~ek~ld~~~~g~GlmP 279 (553)
.|.|-|.|.|. ..+ .-+|.=||+||.+-++.+++ ..|. .+.+.+||.....+|.... ..|-++
T Consensus 30 ~~~~tGaiIASptts---npDYrY~W~RDaa~t~~aL~~~~~~G~~~~a~~~~~~l~~~~~lQ~~~~-------~~G~l~ 99 (472)
T 1gai_A 30 SGADSGIVVASPSTD---NPDYFYTWTRDSGLVIKTLVDLFRNGDTDLLSTIEHYISSQAIIQGVSN-------PSGDLS 99 (472)
T ss_dssp TTCCTTCBCSCSCBS---SSBCCSEEHHHHHHHHHHHHHHHHTTCGGGHHHHHHHHHHHHHHHHCCB-------TTBCTT
T ss_pred CCCCCceEEeeCCCC---CCCCeEEchhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhhcccC-------CCCccc
Confidence 45567776553 322 23699999999999999999 6666 5666677777666774322 133344
Q ss_pred ------ceEEEeeccCCCCCccccccCCc--------cccccccccccccccHHHHHHHHHhhccccchhcc---chhhH
Q 008801 280 ------ASFKVRNVPLESNKFEEVLDPDF--------GESAIGRVAPVDSGLWWIILLRAYGKITGDYALQE---RVDVQ 342 (553)
Q Consensus 280 ------ASFkV~~~~~~~~~~ee~l~aDF--------Ge~AIGRVapVDSgLWWIILlraY~k~TGD~sla~---~pevQ 342 (553)
.-|.| + ++..+ ++. |.+|+| ++ +.+.+ ...+|+..+.. .+-++
T Consensus 100 ~~glgE~~y~v-----d---G~~~~-~~w~~~Q~D~~g~ra~~--------~~-~~~~~--l~~~g~~~~~~~~~w~~i~ 159 (472)
T 1gai_A 100 SGGLGEPKFNV-----D---ETAYT-GSWGRPQRDGPALRATA--------MI-GFGQW--LLDNGYTSAATEIVWPLVR 159 (472)
T ss_dssp TTGGGCCEECT-----T---SCBCC-SCCSCCCTHHHHHHHHH--------HH-HHHHH--HHHTTCHHHHHHTHHHHHH
T ss_pred cCCCCCceEcc-----C---CCccC-CcCCCccccccchhHHH--------HH-HHHHH--HHHcCCccccchhHHHHHH
Confidence 66643 2 11111 122 222222 22 44444 44577765432 14455
Q ss_pred HHHHHHHHHhhhcCCCCCCceeecCCccccccccccCCCchhHHHHHHHHHHHHHHHhcccCC
Q 008801 343 TGIKLIMNLCLADGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQALFYTALRCSREMLTVSDG 405 (553)
Q Consensus 343 rGirlIL~lCL~~~Fd~fPtLlVpDg~~MIDRRMgv~G~PLEIQaLfY~ALRca~eLL~~~~~ 405 (553)
+.+..+.+.=-.++||..= -| .|+-..--+--+.||.++.+|.+....
T Consensus 160 ~~l~~v~~~w~~pd~dlWE------------er---~g~~~~T~~~~~~AL~~aa~lA~~~g~ 207 (472)
T 1gai_A 160 NDLSYVAQYWNQTGYDLWE------------EV---NGSSFFTIAVQHRALVEGSAFATAVGS 207 (472)
T ss_dssp HHHHHHHHHTTSCEECTTS------------CC---EEEEHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHhcCCCCCCCCc------------cc---CCCCHHHHHHHHHHHHHHHHHHHHcCC
Confidence 5555444433333333221 22 244555667788999999999887433
No 18
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=34.25 E-value=76 Score=32.61 Aligned_cols=37 Identities=14% Similarity=0.420 Sum_probs=30.8
Q ss_pred hhhHHHHHhcCCC---------------HHHHHHHHHHHHHHhhhhhcCCCc
Q 008801 494 LGNLWSIVSSLGT---------------PKQNESILNLIEAKWDDLVGHMPL 530 (553)
Q Consensus 494 LGNllAILssLat---------------~~Qs~aIm~Lie~rW~dLvg~MPl 530 (553)
..|-++|+.|..= .+|+++.|.-+.++=+.++..||-
T Consensus 488 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 539 (550)
T 2e4g_A 488 NSNYYCVLAGLGLVPDAPSPRLAHMPQATESVDEVFGAVKDRQRNLLETLPS 539 (550)
T ss_dssp HHHHHHHHHHHTCCCSSCCGGGGGCHHHHHHTHHHHHHHHHHHHHHHHHCCB
T ss_pred cCcHHHHhcCCCcCCCCCChhhhcccchHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 8899999876433 678888999999999999999984
No 19
>2rdy_A BH0842 protein; PSI-II, structural genomics, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.03A {Bacillus halodurans c-125}
Probab=32.72 E-value=1e+02 Score=34.13 Aligned_cols=85 Identities=9% Similarity=0.014 Sum_probs=49.8
Q ss_pred cHHHHHHHHHhhccccchhccc---hhhHHHHHHHHHHhhhcC---CCCCCceeecCCccccc-c-ccccCCCchhHHHH
Q 008801 317 LWWIILLRAYGKITGDYALQER---VDVQTGIKLIMNLCLADG---FDMFPSLLVTDGSCMID-R-RMGIHGHPLEIQAL 388 (553)
Q Consensus 317 LWWIILlraY~k~TGD~sla~~---pevQrGirlIL~lCL~~~---Fd~fPtLlVpDg~~MID-R-RMgv~G~PLEIQaL 388 (553)
-|-.-.+|-|.+.|||.+|.+. |=+..+-+..++.+-.+. +...|+. -||=..-.. . --.+.| +-+.+++
T Consensus 451 awla~~lw~yy~~TgD~~fL~~~~~p~l~e~A~F~~~~l~~~~~g~y~i~p~~-sPE~~~~~~g~~~~~~~n-~tytn~~ 528 (803)
T 2rdy_A 451 VWLTQHLWEHYTFGEDEAYLRDTAYPIMKEAALFCLDWLIENEAGYLVTSPST-SPEQRFRIGEKGYAVSSA-TTMDLSL 528 (803)
T ss_dssp HHHHHHHHHHHHHHCCHHHHHHTHHHHHHHHHHHHHHHCEECTTSCEECSSBC-BTTBCEEETTEEECCBSC-CHHHHHH
T ss_pred HHHHHHHHHHHHhhCCHHHHHhhchHHHHHHHHHHHHhhEECCCCcEEECCCC-cccccccCCCcccccccC-hHHHHHH
Confidence 4556779999999999999875 667777777777764332 2233332 233111000 0 112333 4566666
Q ss_pred HHHHHHHHHHHhccc
Q 008801 389 FYTALRCSREMLTVS 403 (553)
Q Consensus 389 fY~ALRca~eLL~~~ 403 (553)
....|+.|.++.+..
T Consensus 529 ~~~~l~~a~~a~~~L 543 (803)
T 2rdy_A 529 IAECFDNCIQAAKRL 543 (803)
T ss_dssp HHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHH
Confidence 667777777666654
No 20
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=31.66 E-value=1.2e+02 Score=26.82 Aligned_cols=54 Identities=30% Similarity=0.459 Sum_probs=34.6
Q ss_pred hhhHHHHHHHHHHhhhcCCCCCCceeecCCccccccccccCCCc-hhHHHHHHHH------------HHHHHHHhcccCC
Q 008801 339 VDVQTGIKLIMNLCLADGFDMFPSLLVTDGSCMIDRRMGIHGHP-LEIQALFYTA------------LRCSREMLTVSDG 405 (553)
Q Consensus 339 pevQrGirlIL~lCL~~~Fd~fPtLlVpDg~~MIDRRMgv~G~P-LEIQaLfY~A------------LRca~eLL~~~~~ 405 (553)
.++++||.|+.+++-. +.| ---..|||.| ++++..+|+.+.+
T Consensus 52 ~d~~~GI~lLe~l~~~-------------------------~~p~~~Rd~lY~LAvg~yklg~Y~~A~~~~~~lL~~eP~ 106 (126)
T 1nzn_A 52 DDIRKGIVLLEELLPK-------------------------GSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQ 106 (126)
T ss_dssp HHHHHHHHHHHHHTTT-------------------------SCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHHHhc-------------------------CCcchHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCCC
Confidence 7899999999998832 123 2335677765 5777888887544
Q ss_pred CCchH---HHHHHHHHH
Q 008801 406 SGSNN---LVRAINNRL 419 (553)
Q Consensus 406 ~~~~~---~~~~I~~RL 419 (553)
+.+ +-..|.+++
T Consensus 107 --n~QA~~Lk~~i~~~i 121 (126)
T 1nzn_A 107 --NNQAKELERLIDKAM 121 (126)
T ss_dssp --CHHHHHHHHHHHHHH
T ss_pred --CHHHHHHHHHHHHHH
Confidence 433 444455444
No 21
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=26.26 E-value=1.2e+02 Score=30.80 Aligned_cols=143 Identities=13% Similarity=0.211 Sum_probs=75.4
Q ss_pred CceeecCCccccccccccCCCchhHHHHHHHHHHHHHHHhcccCCC-C-chH----HHHHHHHHHHHHHHhhhhhcccch
Q 008801 361 PSLLVTDGSCMIDRRMGIHGHPLEIQALFYTALRCSREMLTVSDGS-G-SNN----LVRAINNRLSALSFHIREYYWVDM 434 (553)
Q Consensus 361 PtLlVpDg~~MIDRRMgv~G~PLEIQaLfY~ALRca~eLL~~~~~~-~-~~~----~~~~I~~RL~aLs~hir~yYWlD~ 434 (553)
..++|=|++. -| .|++=|-+- .|+..|..|....... + ... +-+....|....+.++..+|-+..
T Consensus 346 rv~LiGDAAh----~~----~P~~GqGi~-~ai~da~~La~~L~~~~~~~~~~l~~Y~~~~~~~~~~~~~~~~~~y~~~~ 416 (526)
T 2pyx_A 346 NCIAIGMAAG----FI----EPLEASALA-LIEWTASTLAQQLPPNRMVMDTISARVNERYQQHWQQIIDFLKLHYVISQ 416 (526)
T ss_dssp TEEECGGGTE----EC----CCTTCHHHH-HHHHHHHHHHHTCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred CEEEEEhhhc----cc----CccccccHH-HHHHHHHHHHHHhhhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 4566777763 33 577777775 5677776666554310 0 111 222333333333334444442211
Q ss_pred hhhhhhhccCCcccchhhhcccCcCCCCcchhhhhccCCCCCeeeeeccCCcccc----hhhhhhhHHHHHhcCC-----
Q 008801 435 KKINEIYRYKTEEYSTDATNKFNIYPEQIPSWLMDWIPEEGGYLIGNLQPAHMDF----RFFTLGNLWSIVSSLG----- 505 (553)
Q Consensus 435 ~~ln~IyRykTEeYs~~a~NkFNI~pesIP~Wl~dWlp~~GGYliGNl~P~rmDF----RfFsLGNllAILssLa----- 505 (553)
.+ ...|=..... -.-.|+++-..+..|.-.. |-..|| -.|...+-.+|+.|..
T Consensus 417 r~--------~~~fw~~~~~-~~~~p~~l~~~~~~~~~~~---------~~~~~~~~~~~~f~~~~~~~v~~G~~~~~~~ 478 (526)
T 2pyx_A 417 RQ--------EDRYWRDHRE-SNSIPDSLQAMLELWRYQT---------PSQQDISYKEALFPAASFQYVLYGMSFNTQL 478 (526)
T ss_dssp CC--------SSHHHHHTTS-GGGSCHHHHHHHHHHTTSC---------CCGGGCCBSSCSSCHHHHHHHHHHTTCCCCC
T ss_pred CC--------CCHHHHHHhh-cCCCCHHHHHHHHHHHhcC---------CccccccccccccCHhHHHHHhcCCCCCCCC
Confidence 10 0001110000 1124555555556664332 222233 4677888888887643
Q ss_pred -------CHHHHHHHHHHHHHHhhhhhcCCCc
Q 008801 506 -------TPKQNESILNLIEAKWDDLVGHMPL 530 (553)
Q Consensus 506 -------t~~Qs~aIm~Lie~rW~dLvg~MPl 530 (553)
+++|.+++|+-+.++=+.++..||-
T Consensus 479 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 510 (526)
T 2pyx_A 479 PTHVKPSMQQLAQRLFNDNQQRTQALSKNLPT 510 (526)
T ss_dssp CSSCCHHHHHHHHHHHHHHHHHHHHHHHHCCB
T ss_pred CcccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 2677888999999999999999984
Done!