BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 008807
(553 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225466135|ref|XP_002268388.1| PREDICTED: nitric oxide synthase 1 [Vitis vinifera]
gi|296084222|emb|CBI24610.3| unnamed protein product [Vitis vinifera]
Length = 564
Score = 815 bits (2105), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/564 (74%), Positives = 478/564 (84%), Gaps = 11/564 (1%)
Query: 1 MALKTLTT-FLSPLSLPHHFTNSTPKFLKTYTKPTLIVCKST-------LSPETQFESDG 52
MALK LT+ FLSPLSLP+ +N TPKF YTKPT I C++ S + ESDG
Sbjct: 1 MALKPLTSVFLSPLSLPYSPSNPTPKFSSFYTKPTPISCQTQAHQQAAPTSDPYRPESDG 60
Query: 53 AGAAAPTRGDRFLELQKAKEAAKVVVRDSKKKRKKKDKVLKVNSAVASCYGCGAPLQTSE 112
GAAAPTRGD FLE ++ A++VV +KKK+K K SA ++CYGCGAPLQT E
Sbjct: 61 LGAAAPTRGDLFLEHHQSVAASEVVFNANKKKKKVKFSGSWKASAASACYGCGAPLQTLE 120
Query: 113 SDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYAGGKQFVSADELR 172
+DAPGYVDP+TYELKKKH Q +TVLCGRCRLLSHG MITAVGGNGGY+GGKQF+SA+ELR
Sbjct: 121 TDAPGYVDPETYELKKKHRQLRTVLCGRCRLLSHGQMITAVGGNGGYSGGKQFISAEELR 180
Query: 173 EKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDLLPKGTDFNCVGD 232
EKLSHLR EKALIVKLVDIVDFNGSFLA +RDLAGANPIILVVTKVDLLPK TD NCVGD
Sbjct: 181 EKLSHLRHEKALIVKLVDIVDFNGSFLAHVRDLAGANPIILVVTKVDLLPKETDLNCVGD 240
Query: 233 WVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGSANVGKSAFINAL 292
WVVEAT KKKLNVLSVHLTSSKSL GI GVASEIQKEKKGR+VYILGSANVGKSAFINAL
Sbjct: 241 WVVEATMKKKLNVLSVHLTSSKSLVGISGVASEIQKEKKGRNVYILGSANVGKSAFINAL 300
Query: 293 LKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPGVHLHHRQAAVVH 352
LK M +RDPAAA AQ+Y+PIQSAVPGTTLGPIQIDAFLGGGKLYDTPGVHLHHRQAAVVH
Sbjct: 301 LKMMAQRDPAAAAAQRYKPIQSAVPGTTLGPIQIDAFLGGGKLYDTPGVHLHHRQAAVVH 360
Query: 353 AEDLPALAPQSRLRGQ---SFAVISETETNNEFKSHGLNGFTIFWGGLVRIDLLKVLPET 409
+EDLPALAP+SRLRGQ +F V + T + KS+GLNGF+IFWGGLVRID++KVLP+T
Sbjct: 361 SEDLPALAPRSRLRGQCFPNFQVAFDDSTLSRIKSNGLNGFSIFWGGLVRIDIVKVLPQT 420
Query: 410 CLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRERLLEIKFEDT 469
LTFYGPK+L ++MVPTDKADEFYQKELGV LTPP GKQ+AE W GL+ ER L+IKFED+
Sbjct: 421 RLTFYGPKALNIHMVPTDKADEFYQKELGVLLTPPTGKQRAEDWLGLETERQLQIKFEDS 480
Query: 470 ERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVEVFVRNPMPVGK 529
+RPA D+AISGLGWI+VEP+ RS+R SD +LE T+ +L L++ VPKPVE+FVR P+PVGK
Sbjct: 481 DRPACDLAISGLGWIAVEPIGRSLRTSDSDLEETAEQLQLSIQVPKPVEIFVRPPIPVGK 540
Query: 530 AGAEWYQYRELTETELEVRPKWYF 553
G EWYQYRELTE E+EVRP+WYF
Sbjct: 541 GGGEWYQYRELTEKEVEVRPQWYF 564
>gi|255539795|ref|XP_002510962.1| Nitric-oxide synthase, putative [Ricinus communis]
gi|223550077|gb|EEF51564.1| Nitric-oxide synthase, putative [Ricinus communis]
Length = 567
Score = 810 bits (2091), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 426/569 (74%), Positives = 481/569 (84%), Gaps = 18/569 (3%)
Query: 1 MALKTLTTFLSPLSLPHHFTNSTPKFLKTYT-KPTLIVCKSTLS-----PETQF-----E 49
MA KTL TF SP+SLPH+ T+ KFLK + K T I CKST S +TQ E
Sbjct: 1 MAPKTLVTFFSPVSLPHNLTHFNTKFLKFNSRKTTPIFCKSTQSQQKPVSDTQLPLSIPE 60
Query: 50 SDGAGAAAPTRGDRFLELQKAKEAAKVVVRDSKKKRKKKDK---VLKVNSAVASCYGCGA 106
+ G GAAAPT G++FLE Q+A +AAK+V++++KKKR+++ LKVNS V CYGCGA
Sbjct: 61 TSGTGAAAPTPGEQFLERQQAFQAAKLVMKEAKKKRRREKVREKALKVNSMVVCCYGCGA 120
Query: 107 PLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYAGGKQFV 166
PLQT + +APGYV PDTYELKK+HHQ +TVLCGRC+LLSHGHMITAVGGNGGY+GGKQFV
Sbjct: 121 PLQTLDQEAPGYVQPDTYELKKRHHQLRTVLCGRCKLLSHGHMITAVGGNGGYSGGKQFV 180
Query: 167 SADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDLLPKGTD 226
SADELREKLSHLR E+ L+VKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDLLPK TD
Sbjct: 181 SADELREKLSHLRYERVLVVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDLLPKETD 240
Query: 227 FNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGSANVGKS 286
FNC+GDWVVEATTKKKLNVLSVHLTSSKSL GI GV SEIQKEKKGRDVYILGSANVGKS
Sbjct: 241 FNCIGDWVVEATTKKKLNVLSVHLTSSKSLVGIAGVVSEIQKEKKGRDVYILGSANVGKS 300
Query: 287 AFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPGVHLHHR 346
AFINALLK M +RDPAAA A+KYRPIQSAVPGTTLG IQIDAFLGGGKL+DTPGVHLHHR
Sbjct: 301 AFINALLKMMAQRDPAAAAARKYRPIQSAVPGTTLGSIQIDAFLGGGKLFDTPGVHLHHR 360
Query: 347 QAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRIDLLKVL 406
QAAVV +EDLP LAP+SRLRGQSF V S ++F+S+GLNGF+IFWGGLVRID+LKVL
Sbjct: 361 QAAVVQSEDLPILAPRSRLRGQSFPVCS--LQTDKFESNGLNGFSIFWGGLVRIDVLKVL 418
Query: 407 PETCLTFYGPKSLQVYMVPTDKADEFYQ--KELGVTLTPPIGKQKAEGWKGLDRERLLEI 464
PET LTFYGPK+LQ ++VPTD+ADEFYQ KELGV LTPP G + A+ WKGL R L+I
Sbjct: 419 PETSLTFYGPKALQFHIVPTDEADEFYQASKELGVLLTPPTGIEGAKDWKGLGIIRQLQI 478
Query: 465 KFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVEVFVRNP 524
KFED ERPASDVAISGLGWI+VEPV +S R +NLE T+ ELHLAVHVP PVE+FVR P
Sbjct: 479 KFEDAERPASDVAISGLGWIAVEPVSKSRRKPVLNLEETAKELHLAVHVPNPVEIFVRPP 538
Query: 525 MPVGKAGAEWYQYRELTETELEVRPKWYF 553
+PVGK+G+EWYQYRELTE E E+RPKW+F
Sbjct: 539 LPVGKSGSEWYQYRELTEKEEEIRPKWHF 567
>gi|449488606|ref|XP_004158109.1| PREDICTED: NO-associated protein 1,
chloroplastic/mitochondrial-like [Cucumis sativus]
Length = 555
Score = 800 bits (2065), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/563 (74%), Positives = 469/563 (83%), Gaps = 18/563 (3%)
Query: 1 MALKTLTTFLSPLSLPHHFTNSTPKFLKTYTKPTLIVCKSTLSPETQF---------ESD 51
MA+ +T P SLP FT S K LKT + +LI+ S S ET ESD
Sbjct: 1 MAVAPFSTIFFP-SLPSIFTTS--KSLKTPSSSSLIL--SQFSFETSHKKPPTPDPPESD 55
Query: 52 GAGAAAPTRGDRFLELQKAKEAAKVVVRDSKKKRKKKDK-VLKVNSAVASCYGCGAPLQT 110
G GAAAPTRGDRFLE + EAAK V++++ K RK+K LKV+ AVASCYGCGAPLQT
Sbjct: 56 GTGAAAPTRGDRFLERHHSVEAAKFVLKENNKDRKRKKDKALKVSLAVASCYGCGAPLQT 115
Query: 111 SESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYAGGKQFVSADE 170
E DAPGYV+P+TYELKKKHHQ + V+CGRCRLLSHGHMITAVGGNGGY+GGKQF+SA+E
Sbjct: 116 LELDAPGYVEPETYELKKKHHQLRRVICGRCRLLSHGHMITAVGGNGGYSGGKQFISAEE 175
Query: 171 LREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDLLPKGTDFNCV 230
LR+KLSHLR EKALIVKLVDIVDFNGSFLAR+RDLAGANPIILVVTKVDLLPKGTD NC+
Sbjct: 176 LRDKLSHLRYEKALIVKLVDIVDFNGSFLARVRDLAGANPIILVVTKVDLLPKGTDLNCI 235
Query: 231 GDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGSANVGKSAFIN 290
GDWVVEATTKKKL+VLSVHLTSSKSL G+ GV ++IQKEKKGRDVYILGSANVGKSAFIN
Sbjct: 236 GDWVVEATTKKKLSVLSVHLTSSKSLVGVAGVVADIQKEKKGRDVYILGSANVGKSAFIN 295
Query: 291 ALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPGVHLHHRQAAV 350
A+LKKM ERDP AA AQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPGVHLHHR AAV
Sbjct: 296 AVLKKMAERDPVAAAAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPGVHLHHRLAAV 355
Query: 351 VHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRIDLLKVLPETC 410
VH+EDLPALAPQSRLRGQ F V NNE S GLNGF+IFWGGLVR+DLLKV PETC
Sbjct: 356 VHSEDLPALAPQSRLRGQHFQV-QHLPMNNELSS-GLNGFSIFWGGLVRVDLLKVQPETC 413
Query: 411 LTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRERLLEIKFEDTE 470
LTFYGPK LQ+ +VPT+KADEFY+KELG++LTPP GKQ W+GL+ R L+I FED +
Sbjct: 414 LTFYGPKGLQIRVVPTEKADEFYEKELGISLTPPSGKQTRNDWRGLETVRQLKINFEDEQ 473
Query: 471 RPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVEVFVRNPMPVGKA 530
RPA DVAISGLGWI+VE ++S+ N+ +LES+ EL LAVHVPKPVE+FVR PMPVGKA
Sbjct: 474 RPACDVAISGLGWITVEQ-KKSLSNNHSDLESSDDELELAVHVPKPVEIFVRPPMPVGKA 532
Query: 531 GAEWYQYRELTETELEVRPKWYF 553
G+EWYQYR+LTE E EVRP+WYF
Sbjct: 533 GSEWYQYRDLTEEEEEVRPRWYF 555
>gi|449451815|ref|XP_004143656.1| PREDICTED: NO-associated protein 1,
chloroplastic/mitochondrial-like [Cucumis sativus]
Length = 555
Score = 797 bits (2058), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/563 (74%), Positives = 469/563 (83%), Gaps = 18/563 (3%)
Query: 1 MALKTLTTFLSPLSLPHHFTNSTPKFLKTYTKPTLIVCKSTLSPETQF---------ESD 51
MAL +T P SLP FT S K LKT + +LI+ S S ET ESD
Sbjct: 1 MALAPFSTIFFP-SLPSIFTTS--KSLKTPSSSSLIL--SQFSFETSHKKPPTPDPPESD 55
Query: 52 GAGAAAPTRGDRFLELQKAKEAAKVVVRDSKKKRKKKDK-VLKVNSAVASCYGCGAPLQT 110
G GAAAPTRGDRFLE + EAAK V++++ K RK+K LKV+ AVASCYGCGAPLQT
Sbjct: 56 GTGAAAPTRGDRFLERHHSVEAAKFVLKENNKDRKRKKDKALKVSLAVASCYGCGAPLQT 115
Query: 111 SESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYAGGKQFVSADE 170
E DAPGYV+P+TYELKKKHHQ + V+CGRCRLLSHGHMITAVGGNGGY+GGKQF+SA+E
Sbjct: 116 LELDAPGYVEPETYELKKKHHQLRRVICGRCRLLSHGHMITAVGGNGGYSGGKQFISAEE 175
Query: 171 LREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDLLPKGTDFNCV 230
LR+KLSHLR EKALIVKLVDIVDFNGSFLAR+RDLAGANPIILVVTKVDLLPKGTD NC+
Sbjct: 176 LRDKLSHLRYEKALIVKLVDIVDFNGSFLARVRDLAGANPIILVVTKVDLLPKGTDLNCI 235
Query: 231 GDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGSANVGKSAFIN 290
GDWVVEATT+KKL+VLSVHLTSSKSL G+ GV ++IQKEKKGRDVYILGSANVGKSAFIN
Sbjct: 236 GDWVVEATTRKKLSVLSVHLTSSKSLVGVAGVVADIQKEKKGRDVYILGSANVGKSAFIN 295
Query: 291 ALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPGVHLHHRQAAV 350
A+LKKM ERDP AA AQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPGVHLHHR AAV
Sbjct: 296 AVLKKMAERDPVAAAAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPGVHLHHRLAAV 355
Query: 351 VHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRIDLLKVLPETC 410
VH+EDLPALAPQSRLRGQ F V +NE S GLNGF+IFWGGLVR+DLLKV PETC
Sbjct: 356 VHSEDLPALAPQSRLRGQHFQV-QHLPMDNELSS-GLNGFSIFWGGLVRVDLLKVQPETC 413
Query: 411 LTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRERLLEIKFEDTE 470
LTFYGPK LQ+ +VPT+KADEFY+KELG++LTPP GKQ W+GL+ R L+I FED +
Sbjct: 414 LTFYGPKGLQIRVVPTEKADEFYEKELGISLTPPSGKQTRNDWRGLETVRQLKINFEDEQ 473
Query: 471 RPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVEVFVRNPMPVGKA 530
RPA DVAISGLGWI+VE ++S+ N+ +LES+ EL LAVHVPKPVE+FVR PMPVGKA
Sbjct: 474 RPACDVAISGLGWITVEQ-KKSLSNNHSDLESSVDELELAVHVPKPVEIFVRPPMPVGKA 532
Query: 531 GAEWYQYRELTETELEVRPKWYF 553
G+EWYQYR+LTE E EVRP+WYF
Sbjct: 533 GSEWYQYRDLTEEEEEVRPRWYF 555
>gi|357450949|ref|XP_003595751.1| Nitric oxide synthase [Medicago truncatula]
gi|355484799|gb|AES66002.1| Nitric oxide synthase [Medicago truncatula]
Length = 547
Score = 793 bits (2049), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/556 (71%), Positives = 464/556 (83%), Gaps = 12/556 (2%)
Query: 1 MALKTLTTFLSPLSLPHHFTNSTPKFLKTYTKPTLIVCKSTLSPETQFESDGAGAAAPTR 60
MALKTL+TFL+PLSLP+ PKF + ++KP LI+C+ + P +G GAAAP+
Sbjct: 1 MALKTLSTFLTPLSLPN------PKFPQIHSKPCLILCEFS-RPSKSRLPEGTGAAAPSP 53
Query: 61 GDRFLELQKAKEAAKVVVRDSKKKRKKKDKVLKVNSAVASCYGCGAPLQTSESDAPGYVD 120
G++FLE Q++ E K++ + + KKK+K LK + +VASCYGCGAPLQTS++DAPG+V
Sbjct: 54 GEKFLERQQSFEPTKLIPK--QNNSKKKEKPLKASISVASCYGCGAPLQTSDNDAPGFVH 111
Query: 121 PDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYAGGKQFVSADELREKLSHLRR 180
+TYELKKKHHQ KTVLCGRC+LLSHG MITAVGG+GGY+GGKQF++A++LR+KLSHLR
Sbjct: 112 SETYELKKKHHQLKTVLCGRCQLLSHGEMITAVGGHGGYSGGKQFITAEDLRQKLSHLRD 171
Query: 181 EKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDLLPKGTDFNCVGDWVVEATTK 240
KALIVKLVD+VDFNGSFL+R+RDLAGANPII+VVTKVDLLP+ TDFNCVGDWVVEA T+
Sbjct: 172 AKALIVKLVDVVDFNGSFLSRVRDLAGANPIIMVVTKVDLLPRDTDFNCVGDWVVEAITR 231
Query: 241 KKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGSANVGKSAFINALLKKMGERD 300
KKLNVLSVHLTSSKSL GI GV SEIQKEKKGRDVYILGSANVGKSAFINALLK M D
Sbjct: 232 KKLNVLSVHLTSSKSLVGITGVISEIQKEKKGRDVYILGSANVGKSAFINALLKTMSYND 291
Query: 301 PAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPGVHLHHRQAAVVHAEDLPALA 360
P AA AQ+Y+P+QSAVPGTTLGPIQI+AF GGGKLYDTPGVHLHHRQ AVV +EDL +LA
Sbjct: 292 PVAAAAQRYKPVQSAVPGTTLGPIQINAFFGGGKLYDTPGVHLHHRQTAVVPSEDLSSLA 351
Query: 361 PQSRLRGQSF---AVISETETNNEFKSHGLNGFTIFWGGLVRIDLLKVLPETCLTFYGPK 417
P+SRLRG SF V+S+ +GLNGF+IFWGGLVRID+LK LPETCLTFYGPK
Sbjct: 352 PKSRLRGLSFPSSQVLSDNTNKGASTVNGLNGFSIFWGGLVRIDVLKALPETCLTFYGPK 411
Query: 418 SLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRERLLEIKFEDTERPASDVA 477
+ ++MVPT+KADEFYQKELGV LTPP G++KAE W+GLD ER L+IKFED ERPA D+A
Sbjct: 412 RMPIHMVPTEKADEFYQKELGVLLTPPSGREKAEHWRGLDSERKLQIKFEDAERPACDIA 471
Query: 478 ISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVEVFVRNPMPVGKAGAEWYQY 537
ISGLGW+SVEPV RS R S N T+GEL LAVHVPKPVE+F R P+PVGKAGAEWY+Y
Sbjct: 472 ISGLGWLSVEPVGRSHRFSQQNAIDTTGELLLAVHVPKPVEIFTRPPLPVGKAGAEWYEY 531
Query: 538 RELTETELEVRPKWYF 553
ELT+ E E+RPKWYF
Sbjct: 532 AELTDKEQEMRPKWYF 547
>gi|301015573|gb|ADK47527.1| NOA1/RIF1 protein [Medicago truncatula]
Length = 547
Score = 792 bits (2046), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/556 (71%), Positives = 464/556 (83%), Gaps = 12/556 (2%)
Query: 1 MALKTLTTFLSPLSLPHHFTNSTPKFLKTYTKPTLIVCKSTLSPETQFESDGAGAAAPTR 60
MALKTL+TFL+PLSLP+ PKF + ++KP LI+C+ + P +G GAAAP+
Sbjct: 1 MALKTLSTFLTPLSLPN------PKFPQIHSKPCLILCEFS-RPSKSRLPEGTGAAAPSP 53
Query: 61 GDRFLELQKAKEAAKVVVRDSKKKRKKKDKVLKVNSAVASCYGCGAPLQTSESDAPGYVD 120
G++FLE Q++ E K++ + + KKK+K LK + +VASCYGCGAPLQTS++DAPG+V
Sbjct: 54 GEKFLERQQSFEPTKLIPK--QNNSKKKEKPLKASISVASCYGCGAPLQTSDNDAPGFVH 111
Query: 121 PDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYAGGKQFVSADELREKLSHLRR 180
+TYELKKKHHQ KTVLCGRC+LLSHG MITAVGG+GGY+GGKQF++A++LR+KLSHLR
Sbjct: 112 SETYELKKKHHQLKTVLCGRCQLLSHGEMITAVGGHGGYSGGKQFITAEDLRQKLSHLRD 171
Query: 181 EKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDLLPKGTDFNCVGDWVVEATTK 240
KALIVKLVD+VDFNGSFL+R+RDLAGANPII+VVTKVDLLP+ TDFNCVGDWVVEA T+
Sbjct: 172 AKALIVKLVDVVDFNGSFLSRVRDLAGANPIIMVVTKVDLLPRDTDFNCVGDWVVEAITR 231
Query: 241 KKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGSANVGKSAFINALLKKMGERD 300
KKLNVLSVHLTSSKSL GI GV SEIQKEKKGRDVYILGSANVGKSAFINALLK M D
Sbjct: 232 KKLNVLSVHLTSSKSLVGITGVISEIQKEKKGRDVYILGSANVGKSAFINALLKTMSYND 291
Query: 301 PAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPGVHLHHRQAAVVHAEDLPALA 360
P AA AQ+Y+P+QSAVPGTTLGPIQI+AF GGGKLYDTPGVHLHHRQ AVV +EDL +LA
Sbjct: 292 PVAAAAQRYKPVQSAVPGTTLGPIQINAFFGGGKLYDTPGVHLHHRQTAVVPSEDLSSLA 351
Query: 361 PQSRLRGQSF---AVISETETNNEFKSHGLNGFTIFWGGLVRIDLLKVLPETCLTFYGPK 417
P+SRLRG SF V+S+ +GLNGF+IFWGGLVRID+LK LPETCLTFYGPK
Sbjct: 352 PKSRLRGLSFPSSQVLSDNTNKGASTVNGLNGFSIFWGGLVRIDVLKALPETCLTFYGPK 411
Query: 418 SLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRERLLEIKFEDTERPASDVA 477
+ ++MVPT+KADEFYQKELGV LTPP G++KAE W+GLD +R L+IKFED ERPA D+A
Sbjct: 412 RMPIHMVPTEKADEFYQKELGVLLTPPSGREKAEHWRGLDSKRKLQIKFEDAERPACDIA 471
Query: 478 ISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVEVFVRNPMPVGKAGAEWYQY 537
ISGLGW+SVEPV RS R S N T+GEL LAVHVPKPVE+F R P+PVGKAGAEWY+Y
Sbjct: 472 ISGLGWLSVEPVGRSHRFSQQNAIDTTGELLLAVHVPKPVEIFTRPPLPVGKAGAEWYEY 531
Query: 538 RELTETELEVRPKWYF 553
ELT+ E E+RPKWYF
Sbjct: 532 AELTDKEQEMRPKWYF 547
>gi|356543000|ref|XP_003539951.1| PREDICTED: nitric oxide synthase 1-like [Glycine max]
Length = 557
Score = 784 bits (2024), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/562 (71%), Positives = 471/562 (83%), Gaps = 14/562 (2%)
Query: 1 MALKTLTTFLSPLSLPHHFTNSTPKFLKTYTKPTLIVCKSTLSPETQF---ESDGAGAAA 57
MALKTL+TFLSPLSLP+ P+FL T KP+LI+C+ S +++ +S+G GAAA
Sbjct: 1 MALKTLSTFLSPLSLPN---TKFPQFLTT--KPSLILCEFPRSQKSRLLAADSEGTGAAA 55
Query: 58 PTRGDRFLELQKAKEAAKVVVRDSKKKRKKKDKVLKVNSAVASCYGCGAPLQTSESDAPG 117
P+ G++FLE Q++ E AK++++++KKKRKKKD +K + AVASCYGCGAPL TS++DAPG
Sbjct: 56 PSPGEKFLERQQSFEDAKIILKENKKKRKKKDNAIKASRAVASCYGCGAPLHTSDADAPG 115
Query: 118 YVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYAGGKQFVSADELREKLSH 177
YVDP+TYELKKKHHQ +TVLC RCRLLSHG MITAVGG+GGY GGK FV+A+ELREKLSH
Sbjct: 116 YVDPETYELKKKHHQLRTVLCRRCRLLSHGKMITAVGGHGGYPGGKLFVTAEELREKLSH 175
Query: 178 LRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDLLPKGTDFNCVGDWVVEA 237
LR EKALIVKLVDIVDFNGSFL+R+RDLAG+NPIILVVTKVDLLP+ TD +CVGDWVVEA
Sbjct: 176 LRHEKALIVKLVDIVDFNGSFLSRVRDLAGSNPIILVVTKVDLLPRDTDLHCVGDWVVEA 235
Query: 238 TTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGSANVGKSAFINALLKKMG 297
T +KKLNVLSVHLTSSKSL GI GV SEIQKEKKGRDVYILGSANVGKSAFINALLK M
Sbjct: 236 TMRKKLNVLSVHLTSSKSLVGITGVISEIQKEKKGRDVYILGSANVGKSAFINALLKTMA 295
Query: 298 ERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPGVHLHHRQAAVVHAEDLP 357
DP AA AQ+Y+PIQSAVPGTTLGPIQI+AFLGGGKLYDTPGVHL+HRQ AVVH+EDLP
Sbjct: 296 INDPVAASAQRYKPIQSAVPGTTLGPIQINAFLGGGKLYDTPGVHLYHRQTAVVHSEDLP 355
Query: 358 ALAPQSRLRGQSF--AVISETETNNEFKSHGLNGFTIFWGGLVRIDLLKVLPETCLTFYG 415
LAPQSRLRG SF +++S E +GLN F+IFWGGLVRID+LKVLPETCLTFYG
Sbjct: 356 ILAPQSRLRGLSFPSSILSSVEEGASTIVNGLNAFSIFWGGLVRIDVLKVLPETCLTFYG 415
Query: 416 PKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRERLLEIKFEDTE----R 471
PK + ++MVPT++A EFYQ ELGV LTPP G + AE WKGL+ ER L+IKFED + +
Sbjct: 416 PKRIPIHMVPTEQAVEFYQTELGVLLTPPSGGENAENWKGLESERKLQIKFEDVDSYDPK 475
Query: 472 PASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVEVFVRNPMPVGKAG 531
PA D+AISGLGW +VEPV RS++ S T+GEL LAVHVPK VE+FVR+P+PVGKAG
Sbjct: 476 PACDIAISGLGWFTVEPVSRSLKISQPKPVETAGELILAVHVPKAVEIFVRSPIPVGKAG 535
Query: 532 AEWYQYRELTETELEVRPKWYF 553
AEWYQY ELTE + E+RPKWYF
Sbjct: 536 AEWYQYVELTEKQEEMRPKWYF 557
>gi|290793111|gb|ADD63989.1| nitric oxide synthase-associated protein I [Solanum tuberosum]
Length = 561
Score = 768 bits (1984), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/547 (72%), Positives = 447/547 (81%), Gaps = 10/547 (1%)
Query: 16 PHHFTNSTPKFLKTYT----KPTLIVCKSTLSPETQFESD--GAGAAAPTRGDRFLELQK 69
P NS+P L Y KPTLI CKST P+T ES+ G GAAAPTRGD +L+ Q+
Sbjct: 16 PFPIPNSSPSSLNIYKFHTPKPTLIFCKST-EPQTISESEPEGYGAAAPTRGDIYLQRQQ 74
Query: 70 AKEAAKVVVRDSKKKRKKKDKVLKVNSAVASCYGCGAPLQTSESDAPGYVDPDTYELKKK 129
A+ V+ +KKK+KKKD + K+++ CYGCGAPL TSE DAPGYVD +TY+LKKK
Sbjct: 75 VVAASSSVLATTKKKKKKKDNIFKISNLAPCCYGCGAPLHTSEVDAPGYVDQETYDLKKK 134
Query: 130 HHQFKTVLCGRCRLLSHGHMITAVGGNGGYAGGKQFVSADELREKLSHLRREKALIVKLV 189
HHQ + +LCGRCRLLSHGHMITAVGGNGGY+GGKQFV+A+ELREKLSH+R EKALIVKLV
Sbjct: 135 HHQLRKILCGRCRLLSHGHMITAVGGNGGYSGGKQFVTAEELREKLSHVRHEKALIVKLV 194
Query: 190 DIVDFNGSFLARIRDLAGANPIILVVTKVDLLPKGTDFNCVGDWVVEATTKKKLNVLSVH 249
DIVDFNGSFLAR+RDLAGANPIILV+TKVDLLPK TD NCVGDWVVEAT KKKLNVLSVH
Sbjct: 195 DIVDFNGSFLARVRDLAGANPIILVITKVDLLPKDTDLNCVGDWVVEATMKKKLNVLSVH 254
Query: 250 LTSSKSLAGIVGVASEIQKEKKGRDVYILGSANVGKSAFINALLKKMGERDPAAAMAQKY 309
LTSSKSL GI GV SEIQKEKKGRDVYILGSANVGKSAFINALL M +DP AA A+KY
Sbjct: 255 LTSSKSLVGISGVVSEIQKEKKGRDVYILGSANVGKSAFINALLNTMPYKDPVAASARKY 314
Query: 310 RPIQSAVPGTTLGPIQIDAFLGGGKLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQS 369
+PIQSAVPGTTLGPI IDAFLGG KLYDTPGVHLHHRQAAV+H EDLP LAPQSRLRGQ
Sbjct: 315 KPIQSAVPGTTLGPIPIDAFLGGEKLYDTPGVHLHHRQAAVIHVEDLPTLAPQSRLRGQV 374
Query: 370 FAVISE---TETNNEFKSHGLNGFTIFWGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPT 426
F + ++ N +S GL+G +IFWGGLVRID+LKVLPETCLTFYGPK+LQ+++VPT
Sbjct: 375 FPSSGQNLDSQIANRMRSSGLSGLSIFWGGLVRIDVLKVLPETCLTFYGPKALQIHVVPT 434
Query: 427 DKADEFYQKELGVTLTPPIGKQKAEGWKGLDRERLLEIKFEDTERPASDVAISGLGWISV 486
++ADEFYQKELGV LTPP GK+KA+ W GL+ +R L+IK+ED ERP DVAISGLGW SV
Sbjct: 435 EEADEFYQKELGVLLTPPTGKEKADDWMGLETKRQLQIKYEDIERPTCDVAISGLGWFSV 494
Query: 487 EPVRRSIRNSDINLESTSGELHLAVHVPKPVEVFVRNPMPVGKAGAEWYQYRELTETELE 546
PV +S + E +GEL VHVPKPVE+FVR+PMPVGKAG WY YRELTE ELE
Sbjct: 495 VPVNKSAGIFNPVSEVKAGELTFIVHVPKPVEIFVRSPMPVGKAGGRWYDYRELTEEELE 554
Query: 547 VRPKWYF 553
VRPKW+F
Sbjct: 555 VRPKWFF 561
>gi|159885612|dbj|BAF93184.1| nitric oxide associated 1 [Nicotiana benthamiana]
Length = 568
Score = 768 bits (1983), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 398/553 (71%), Positives = 454/553 (82%), Gaps = 11/553 (1%)
Query: 12 PLSLPHHFT---NSTPKFLKTY----TKPTLIVCKSTLSPE-TQFESDGAGAAAPTRGDR 63
P LP++ NST L + TK LI+CKST S ++ E DG GAAAPTRGD
Sbjct: 16 PFRLPNYHVSTPNSTLSKLNIFKFHTTKTNLILCKSTESQTVSESEPDGYGAAAPTRGDI 75
Query: 64 FLELQKAKEAAKVVVRDSKKKRKKKDKVLKVNSAVASCYGCGAPLQTSESDAPGYVDPDT 123
+L+ Q+A A+ V+ KKK+KKKDK+ K+++ CYGCGAPL TSE DAPGYV +T
Sbjct: 76 YLQRQQAVAASSTVLATIKKKKKKKDKIFKISNLAPCCYGCGAPLHTSEVDAPGYVHQET 135
Query: 124 YELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYAGGKQFVSADELREKLSHLRREKA 183
Y+LKKKHHQ + VLCGRCRLLSHGHMITAVGGNGGY+GGKQFV+A+ELREKLSHLR EKA
Sbjct: 136 YDLKKKHHQLRKVLCGRCRLLSHGHMITAVGGNGGYSGGKQFVTAEELREKLSHLRHEKA 195
Query: 184 LIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDLLPKGTDFNCVGDWVVEATTKKKL 243
LIVKLVDIVDFNGSFLAR+RDLAGANPIILV+TKVDLLPK TD NCVGDWVVEAT KKKL
Sbjct: 196 LIVKLVDIVDFNGSFLARVRDLAGANPIILVITKVDLLPKETDLNCVGDWVVEATMKKKL 255
Query: 244 NVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGSANVGKSAFINALLKKMGERDPAA 303
NVLSVHLTSSKSL GI GV SEIQKEKKGRDVYILGSANVGKSAFINALL M DP A
Sbjct: 256 NVLSVHLTSSKSLVGIAGVVSEIQKEKKGRDVYILGSANVGKSAFINALLNTMSYNDPVA 315
Query: 304 AMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPGVHLHHRQAAVVHAEDLPALAPQS 363
A A+KY+PIQSAVPGTTLGPI IDAFLGGGK+YDTPGVHLHHRQAAV+H EDLP LAPQS
Sbjct: 316 ATARKYKPIQSAVPGTTLGPIPIDAFLGGGKVYDTPGVHLHHRQAAVIHTEDLPTLAPQS 375
Query: 364 RLRGQSF---AVISETETNNEFKSHGLNGFTIFWGGLVRIDLLKVLPETCLTFYGPKSLQ 420
RLR Q+F + E++ + +S GLNG +IFWGGLVRID+LKVLPETCLTFYGPK+LQ
Sbjct: 376 RLRAQAFPSSGLKLESQIADRVRSSGLNGLSIFWGGLVRIDVLKVLPETCLTFYGPKALQ 435
Query: 421 VYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRERLLEIKFEDTERPASDVAISG 480
++MVPT++ADEFYQKELG+ LTPP GK+KA+GW GL+ +R L+IK+ED ERP DVAISG
Sbjct: 436 LHMVPTEEADEFYQKELGILLTPPTGKEKADGWMGLETKRQLQIKYEDIERPTCDVAISG 495
Query: 481 LGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVEVFVRNPMPVGKAGAEWYQYREL 540
LGW+SV PV +S+ SD E T+GEL VHVPKPVE+FVR P+PVGKAG +WY YREL
Sbjct: 496 LGWLSVIPVNKSVGTSDPVSEVTAGELTFVVHVPKPVEIFVRPPLPVGKAGGQWYDYREL 555
Query: 541 TETELEVRPKWYF 553
TE E EVRPKW+F
Sbjct: 556 TEEESEVRPKWFF 568
>gi|261278032|gb|ACX61572.1| GTPase [Brassica juncea]
Length = 555
Score = 764 bits (1972), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/560 (70%), Positives = 456/560 (81%), Gaps = 12/560 (2%)
Query: 1 MALKTLTTFLSPLSLPHHFTNSTPKFLKTYTKP-TLIVCKSTLSPETQF---ESDGAGAA 56
MAL+TL+TF S LP FT P + P T IVCKS + E E DG AA
Sbjct: 1 MALRTLSTFPS---LPRRFTRPDPTLTVIHRNPSTSIVCKSIANSEPTVSLSERDGFAAA 57
Query: 57 APTRGDRFLELQKAKEAAKVVVRDSKKKRKKKDKVL---KVNSAVASCYGCGAPLQTSES 113
APT G+RFLE Q+A +A KVV ++ K+++KKK + V+++++ CYGCGAPLQTS+
Sbjct: 58 APTPGERFLENQRAHQAQKVVKKELKREKKKKKEESIREVVDTSLSCCYGCGAPLQTSDV 117
Query: 114 DAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYAGGKQFVSADELRE 173
D+PG+VD TY+LKKKHHQ +TV+CGRC+LLSHGHMITAVGGNGGYAGGKQFVSADELRE
Sbjct: 118 DSPGFVDLVTYDLKKKHHQLRTVICGRCQLLSHGHMITAVGGNGGYAGGKQFVSADELRE 177
Query: 174 KLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDLLPKGTDFNCVGDW 233
KLSHLR EKALIVKLVDIVDFNGSFLAR+RDL GANPIILV+TK+DLLPKGTD NC+GDW
Sbjct: 178 KLSHLRHEKALIVKLVDIVDFNGSFLARVRDLVGANPIILVITKIDLLPKGTDMNCIGDW 237
Query: 234 VVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGSANVGKSAFINALL 293
VVE TTKKKLNVLSVHLTSSKSL G+ GVASEIQKEKKGRDVYILG+ANVGKSAFINALL
Sbjct: 238 VVEVTTKKKLNVLSVHLTSSKSLDGVSGVASEIQKEKKGRDVYILGAANVGKSAFINALL 297
Query: 294 KKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPGVHLHHRQAAVVHA 353
K M ERDP AA AQKY+PIQSAVPGTTLGPIQI+AFLGG KLYDTPGVHLHHRQAAVVH+
Sbjct: 298 KTMAERDPVAAAAQKYKPIQSAVPGTTLGPIQINAFLGGEKLYDTPGVHLHHRQAAVVHS 357
Query: 354 EDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRIDLLKVLPETCLTF 413
+DLPALAPQ+RLRGQSF + T+++N + LNG+T FWGGLVRID+LK LPET TF
Sbjct: 358 DDLPALAPQNRLRGQSFDI--STQSSNSTEGESLNGYTFFWGGLVRIDILKALPETRFTF 415
Query: 414 YGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRERLLEIKFEDTERPA 473
YGPK+L+++ VPT A EFYQKE+GV LTPP GK + + WKGL RLL I+F D +RPA
Sbjct: 416 YGPKALEIHAVPTKTATEFYQKEVGVLLTPPSGKDQMQEWKGLQSHRLLRIEFNDPKRPA 475
Query: 474 SDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVEVFVRNPMPVGKAGAE 533
SDVAISGLGWIS+EP+RRS + +LE E+ + V VPKPVEVF+R +P+G +GAE
Sbjct: 476 SDVAISGLGWISIEPIRRSKDSEPRDLEEAEHEIRVCVSVPKPVEVFIRPTLPIGTSGAE 535
Query: 534 WYQYRELTETELEVRPKWYF 553
WYQYR+LT+ E EVRPKWYF
Sbjct: 536 WYQYRDLTDKEEEVRPKWYF 555
>gi|302140656|gb|ADK95138.1| nitric oxide-associated protein 1 [Nicotiana attenuata]
Length = 548
Score = 761 bits (1964), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/548 (72%), Positives = 450/548 (82%), Gaps = 11/548 (2%)
Query: 10 LSPLSLPHHFT---NSTPKFLKTYT----KPTLIVCKSTLSPETQF-ESDGAGAAAPTRG 61
+SP LP++ NSTP L + KP LI+CK+T S E DG GAAAPTRG
Sbjct: 1 ISPFRLPNYHISTPNSTPTKLNIFKFHTPKPNLILCKTTESETVSVSEPDGYGAAAPTRG 60
Query: 62 DRFLELQKAKEAAKVVVRDSKKKRKKKDKVLKVNSAVASCYGCGAPLQTSESDAPGYVDP 121
D +L+ Q+A A+ V+ +KKK+KKKDK+ KV++ CYGCGAPL TSE DAPGYVD
Sbjct: 61 DIYLQRQQAVAASTSVIATTKKKKKKKDKIFKVSNLAPCCYGCGAPLHTSEVDAPGYVDQ 120
Query: 122 DTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYAGGKQFVSADELREKLSHLRRE 181
+TY+LKKKHHQ + VLCGRCRLLSHGHMITAVGGNGGY+GGKQFV+A+ELREKLSHLR E
Sbjct: 121 ETYDLKKKHHQLRKVLCGRCRLLSHGHMITAVGGNGGYSGGKQFVTAEELREKLSHLRNE 180
Query: 182 KALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDLLPKGTDFNCVGDWVVEATTKK 241
KALIVKLVDIVDFNGSFLAR+RDLAGANPIILV+TKVDLLPK TD NCVGDWVVEAT KK
Sbjct: 181 KALIVKLVDIVDFNGSFLARVRDLAGANPIILVITKVDLLPKETDLNCVGDWVVEATMKK 240
Query: 242 KLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGSANVGKSAFINALLKKMGERDP 301
KLNVLSVHLTSSKSL GI GV SEIQKEKKGRDVYILGSANVGKSAFINALL M DP
Sbjct: 241 KLNVLSVHLTSSKSLVGIAGVVSEIQKEKKGRDVYILGSANVGKSAFINALLNTMSYNDP 300
Query: 302 AAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPGVHLHHRQAAVVHAEDLPALAP 361
AA A+KY+PIQSAVPGTTLGPI DAFLGGGK+YDTPGVHLHHRQAAV+HAEDLP LAP
Sbjct: 301 IAATARKYKPIQSAVPGTTLGPIPXDAFLGGGKVYDTPGVHLHHRQAAVIHAEDLPTLAP 360
Query: 362 QSRLRGQSF---AVISETETNNEFKSHGLNGFTIFWGGLVRIDLLKVLPETCLTFYGPKS 418
QSRLRGQ+F + E++ + +S GL+G +IFWGGLVRID+LKVLPETCLTFYGPK+
Sbjct: 361 QSRLRGQAFPSSGLNLESQIADRVRSSGLSGLSIFWGGLVRIDVLKVLPETCLTFYGPKA 420
Query: 419 LQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRERLLEIKFEDTERPASDVAI 478
LQ++MVPT++ADEFYQKELG+ LTPP GK+KA+GW GL+ +R L+IK+ED ERP DVAI
Sbjct: 421 LQLHMVPTEEADEFYQKELGILLTPPTGKEKADGWMGLETKRQLQIKYEDIERPTCDVAI 480
Query: 479 SGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVEVFVRNPMPVGKAGAEWYQYR 538
SGLGW SV PV +S+ SD E T+GEL VHVPKPVE+FVR P+PVGKAG +WY YR
Sbjct: 481 SGLGWFSVIPVNKSVGTSDPVSEVTAGELTFVVHVPKPVEIFVRPPLPVGKAGGQWYDYR 540
Query: 539 ELTETELE 546
ELTE E E
Sbjct: 541 ELTEEESE 548
>gi|356531613|ref|XP_003534371.1| PREDICTED: nitric oxide synthase 1-like [Glycine max]
Length = 554
Score = 754 bits (1946), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/562 (70%), Positives = 460/562 (81%), Gaps = 17/562 (3%)
Query: 1 MALKTLTTFLSPLSLPHHFTNSTPKFLKTYTKPTLIVCKSTLSPETQF---ESDGAGAAA 57
MALKTL+TF SPLSLP+ KFL + KP LI+ + S +++ +++G GAAA
Sbjct: 1 MALKTLSTFFSPLSLPNT------KFLTS--KPCLILFEFPRSQKSRLPVADAEGTGAAA 52
Query: 58 PTRGDRFLELQKAKEAAKVVVRDSKKKRKKKDK--VLKVNSAVASCYGCGAPLQTSESDA 115
P+ G++FLE Q++ E AK++++++ K +KKK K +K + AVASCYGCGAPL TS++DA
Sbjct: 53 PSPGEKFLERQQSFEDAKLILKENNKNKKKKKKDNAIKASRAVASCYGCGAPLHTSDADA 112
Query: 116 PGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYAGGKQFVSADELREKL 175
PGYVDP+TYELKKKHHQ +TVLC RCRLLSHG MITAVGG+GGY GGK FVSA+ELREKL
Sbjct: 113 PGYVDPETYELKKKHHQLRTVLCRRCRLLSHGKMITAVGGHGGYPGGKLFVSAEELREKL 172
Query: 176 SHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDLLPKGTDFNCVGDWVV 235
SHLR EKALIVKLVDIVDFNGSFL+R+RDLAG+NPI+LVVTKVDLLP+ TD NCVGDWVV
Sbjct: 173 SHLRHEKALIVKLVDIVDFNGSFLSRVRDLAGSNPIVLVVTKVDLLPRDTDLNCVGDWVV 232
Query: 236 EATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGSANVGKSAFINALLKK 295
EAT +KKLNVLSVHLTSSKSL GI GV SEIQKEKKGRDVYILGSANVGKSAFINALLK
Sbjct: 233 EATMRKKLNVLSVHLTSSKSLVGITGVISEIQKEKKGRDVYILGSANVGKSAFINALLKT 292
Query: 296 MGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPGVHLHHRQAAVVHAED 355
M DP AA AQ+Y+PIQSAVPGTTLGPIQI+AFLGGGKLYDTPGVHL HRQ AVVH+ED
Sbjct: 293 MAINDPVAASAQRYKPIQSAVPGTTLGPIQINAFLGGGKLYDTPGVHLFHRQTAVVHSED 352
Query: 356 LPALAPQSRLRGQSF-AVISETETNNEFKS---HGLNGFTIFWGGLVRIDLLKVLPETCL 411
LP LAPQSRLRG +F + I ++ E S +GLN F+IFWGGLVRID+LKVLPETCL
Sbjct: 353 LPILAPQSRLRGLAFPSSIVSSDNVEEGASTIVNGLNEFSIFWGGLVRIDVLKVLPETCL 412
Query: 412 TFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRERLLEIKFEDTER 471
TFYGPK + ++MVPT++A EFYQ ELG LTPP G + AE WKGL+ ER L+IKFE +R
Sbjct: 413 TFYGPKRIPIHMVPTEQAVEFYQTELGFLLTPPSGGENAENWKGLESERKLQIKFEVVDR 472
Query: 472 PASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVEVFVRNPMPVGKAG 531
PA D+AISGLGW +VEPV RS + S T+GEL LAVHVPK VE+FVR P+PV KAG
Sbjct: 473 PACDIAISGLGWFTVEPVSRSHKISQPKPVETAGELILAVHVPKAVEIFVRPPIPVSKAG 532
Query: 532 AEWYQYRELTETELEVRPKWYF 553
AEWYQY ELTE + E+RPKWYF
Sbjct: 533 AEWYQYVELTEKQEEMRPKWYF 554
>gi|30692870|ref|NP_850666.1| Nitric oxide synthase 1 [Arabidopsis thaliana]
gi|75115358|sp|Q66GP9.1|NOA1_ARATH RecName: Full=NO-associated protein 1, chloroplastic/mitochondrial;
Short=AtNOA1; AltName: Full=Dubious mitochondrial nitric
oxide synthase 1; Short=AtNOS1; AltName: Full=GTPase
NOA1; AltName: Full=Protein RESISTANT TO INHIBITION BY
FOSMIDOMYCIN 1; Flags: Precursor
gi|51536476|gb|AAU05476.1| At3g47450 [Arabidopsis thaliana]
gi|53850493|gb|AAU95423.1| At3g47450 [Arabidopsis thaliana]
gi|110740509|dbj|BAE98360.1| hypothetical protein [Arabidopsis thaliana]
gi|332644762|gb|AEE78283.1| Nitric oxide synthase 1 [Arabidopsis thaliana]
Length = 561
Score = 752 bits (1942), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/562 (69%), Positives = 454/562 (80%), Gaps = 10/562 (1%)
Query: 1 MALKTLTTFLSPLSLPHHFTNSTPKFLKTYTKPTL-IVCKSTLS---PETQFESDGAGAA 56
MAL+TL+TF S L H T P Y PT IVCKS + P + E DG AA
Sbjct: 1 MALRTLSTFPS-LPRRHTTTRREPNLTVIYRNPTTSIVCKSIANSEPPVSLSERDGFAAA 59
Query: 57 APTRGDRFLELQKAKEAAKVVVRDSKKKRKKKDKVLK----VNSAVASCYGCGAPLQTSE 112
APT G+RFLE Q+A EA KVV ++ KK++KKK + + V+++V+ CYGCGAPLQTS+
Sbjct: 60 APTPGERFLENQRAHEAQKVVKKEIKKEKKKKKEEIIARKVVDTSVSCCYGCGAPLQTSD 119
Query: 113 SDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYAGGKQFVSADELR 172
D+PG+VD TYELKKKHHQ +T++CGRC+LLSHGHMITAVGGNGGY GGKQFVSADELR
Sbjct: 120 VDSPGFVDLVTYELKKKHHQLRTMICGRCQLLSHGHMITAVGGNGGYPGGKQFVSADELR 179
Query: 173 EKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDLLPKGTDFNCVGD 232
EKLSHLR EKALIVKLVDIVDFNGSFLAR+RDL GANPIILV+TK+DLLPKGTD NC+GD
Sbjct: 180 EKLSHLRHEKALIVKLVDIVDFNGSFLARVRDLVGANPIILVITKIDLLPKGTDMNCIGD 239
Query: 233 WVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGSANVGKSAFINAL 292
WVVE T +KKLNVLSVHLTSSKSL G+ GVASEIQKEKKGRDVYILG+ANVGKSAFINAL
Sbjct: 240 WVVEVTMRKKLNVLSVHLTSSKSLDGVSGVASEIQKEKKGRDVYILGAANVGKSAFINAL 299
Query: 293 LKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPGVHLHHRQAAVVH 352
LK M ERDP AA AQKY+PIQSAVPGTTLGPIQI+AF+GG KLYDTPGVHLHHRQAAVVH
Sbjct: 300 LKTMAERDPVAAAAQKYKPIQSAVPGTTLGPIQINAFVGGEKLYDTPGVHLHHRQAAVVH 359
Query: 353 AEDLPALAPQSRLRGQSFAVIS-ETETNNEFKSHGLNGFTIFWGGLVRIDLLKVLPETCL 411
++DLPALAPQ+RLRGQSF + + T++++ K LNG+T FWGGLVRID+LK LPETC
Sbjct: 360 SDDLPALAPQNRLRGQSFDISTLPTQSSSSPKGESLNGYTFFWGGLVRIDILKALPETCF 419
Query: 412 TFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRERLLEIKFEDTER 471
TFYGPK+L+++ VPT A FY+KELGV LTPP GK + + WKGL RLL+I+ D +R
Sbjct: 420 TFYGPKALEIHAVPTKTATAFYEKELGVLLTPPSGKNQMQEWKGLQSHRLLQIEINDAKR 479
Query: 472 PASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVEVFVRNPMPVGKAG 531
PASDVAISGLGWIS+EP+R++ +L E+H+ V VPKPVEVF+R +P+G +G
Sbjct: 480 PASDVAISGLGWISIEPIRKTRGTEPRDLNEAEHEIHICVSVPKPVEVFLRPTLPIGTSG 539
Query: 532 AEWYQYRELTETELEVRPKWYF 553
EWYQYRELT+ E EVRPKWYF
Sbjct: 540 TEWYQYRELTDKEEEVRPKWYF 561
>gi|42565686|ref|NP_190329.2| Nitric oxide synthase 1 [Arabidopsis thaliana]
gi|332644761|gb|AEE78282.1| Nitric oxide synthase 1 [Arabidopsis thaliana]
Length = 561
Score = 749 bits (1933), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/562 (68%), Positives = 453/562 (80%), Gaps = 10/562 (1%)
Query: 1 MALKTLTTFLSPLSLPHHFTNSTPKFLKTYTKPTL-IVCKSTLS---PETQFESDGAGAA 56
MAL+TL+TF S L H T P Y PT IVCKS + P + E DG AA
Sbjct: 1 MALRTLSTFPS-LPRRHTTTRREPNLTVIYRNPTTSIVCKSIANSEPPVSLSERDGFAAA 59
Query: 57 APTRGDRFLELQKAKEAAKVVVRDSKKKRKKKDKVLK----VNSAVASCYGCGAPLQTSE 112
APT G+RFLE Q+A EA KVV ++ KK++KKK + + V+++V+ CYGCGAPLQTS+
Sbjct: 60 APTPGERFLENQRAHEAQKVVKKEIKKEKKKKKEEIIARKVVDTSVSCCYGCGAPLQTSD 119
Query: 113 SDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYAGGKQFVSADELR 172
D+PG+VD TYELKKKHHQ +T++CGRC+LLSHGHMITAVGGNGGY GGKQFVSADELR
Sbjct: 120 VDSPGFVDLVTYELKKKHHQLRTMICGRCQLLSHGHMITAVGGNGGYPGGKQFVSADELR 179
Query: 173 EKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDLLPKGTDFNCVGD 232
EKLSHLR EKALIVKLVDIVDFNGSFLAR+RDL GANPIILV+TK+DLLPKGTD NC+GD
Sbjct: 180 EKLSHLRHEKALIVKLVDIVDFNGSFLARVRDLVGANPIILVITKIDLLPKGTDMNCIGD 239
Query: 233 WVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGSANVGKSAFINAL 292
WVVE T +KKLNVLSVHLTSSKSL G+ GVASEIQKEKKGRDVYILG+ANVGKSAFINAL
Sbjct: 240 WVVEVTMRKKLNVLSVHLTSSKSLDGVSGVASEIQKEKKGRDVYILGAANVGKSAFINAL 299
Query: 293 LKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPGVHLHHRQAAVVH 352
LK M ERDP AA AQKY+PIQSAVPGTTLGPIQI+AF+GG KLYDTPGVHLHHRQAAVVH
Sbjct: 300 LKTMAERDPVAAAAQKYKPIQSAVPGTTLGPIQINAFVGGEKLYDTPGVHLHHRQAAVVH 359
Query: 353 AEDLPALAPQSRLRGQSFAVIS-ETETNNEFKSHGLNGFTIFWGGLVRIDLLKVLPETCL 411
++DLPALAPQ+RLRGQSF + + T++++ K LNG+T FWGGLVRID+LK LPETC
Sbjct: 360 SDDLPALAPQNRLRGQSFDISTLPTQSSSSPKGESLNGYTFFWGGLVRIDILKALPETCF 419
Query: 412 TFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRERLLEIKFEDTER 471
TFYGPK+L+++ VPT A FY+ +LGV LTPP GK + + WKGL RLL+I+ D +R
Sbjct: 420 TFYGPKALEIHAVPTKTATAFYEAKLGVLLTPPSGKNQMQEWKGLQSHRLLQIEINDAKR 479
Query: 472 PASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVEVFVRNPMPVGKAG 531
PASDVAISGLGWIS+EP+R++ +L E+H+ V VPKPVEVF+R +P+G +G
Sbjct: 480 PASDVAISGLGWISIEPIRKTRGTEPRDLNEAEHEIHICVSVPKPVEVFLRPTLPIGTSG 539
Query: 532 AEWYQYRELTETELEVRPKWYF 553
EWYQYRELT+ E EVRPKWYF
Sbjct: 540 TEWYQYRELTDKEEEVRPKWYF 561
>gi|297819358|ref|XP_002877562.1| ATNOS1/NOS1 [Arabidopsis lyrata subsp. lyrata]
gi|297323400|gb|EFH53821.1| ATNOS1/NOS1 [Arabidopsis lyrata subsp. lyrata]
Length = 560
Score = 745 bits (1923), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/563 (68%), Positives = 451/563 (80%), Gaps = 13/563 (2%)
Query: 1 MALKTLTTFLSPLSLPHHFTNS-TPKFLKTYTKP-TLIVCKSTLSPETQF---ESDGAGA 55
MAL+TL+TF S LP +T P Y P T I+CKS + E E DG A
Sbjct: 1 MALRTLSTFPS---LPRRYTTRREPNLTVIYRNPATSILCKSIANSEQPLSLSERDGFAA 57
Query: 56 AAPTRGDRFLELQKAKEAAKVVVRDSKKKRKKKDKVL----KVNSAVASCYGCGAPLQTS 111
AAPT G+RFLE Q+A EA KVV ++ KK++KKK + + V+++++ CYGCGAPLQTS
Sbjct: 58 AAPTPGERFLEHQRAHEAQKVVKKELKKEKKKKKEEIIARKVVDTSISCCYGCGAPLQTS 117
Query: 112 ESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYAGGKQFVSADEL 171
+ D+PG+ D TYELKKKHHQ +T++CGRC+LLSHGHMITAVGGNGGY+GGKQFVSADEL
Sbjct: 118 DVDSPGFADLVTYELKKKHHQLRTMICGRCQLLSHGHMITAVGGNGGYSGGKQFVSADEL 177
Query: 172 REKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDLLPKGTDFNCVG 231
REKLSHLR EKALIVKLVDIVDF+GSFLAR+RDL GANPIILV+TK+DLLPKGTD NC+G
Sbjct: 178 REKLSHLRHEKALIVKLVDIVDFHGSFLARVRDLVGANPIILVITKIDLLPKGTDMNCIG 237
Query: 232 DWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGSANVGKSAFINA 291
DWVVE T +KKLNVLSVHLTSSKSL G+ GVASEIQKEKKGRDVYILG+ANVGKSAFINA
Sbjct: 238 DWVVEVTMRKKLNVLSVHLTSSKSLDGVSGVASEIQKEKKGRDVYILGAANVGKSAFINA 297
Query: 292 LLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPGVHLHHRQAAVV 351
LLK M ERDP AA AQKY+PIQSAVPGTTLGPIQI+AFLGG KLYDTPGVHLHHRQAAVV
Sbjct: 298 LLKTMAERDPVAAAAQKYKPIQSAVPGTTLGPIQINAFLGGEKLYDTPGVHLHHRQAAVV 357
Query: 352 HAEDLPALAPQSRLRGQSFAVIS-ETETNNEFKSHGLNGFTIFWGGLVRIDLLKVLPETC 410
H++DLPALAPQ+RLRGQSF + + T++ + K LNG+T FWGGLVRID+LK LPETC
Sbjct: 358 HSDDLPALAPQNRLRGQSFDISTLPTQSPSSPKGESLNGYTFFWGGLVRIDILKALPETC 417
Query: 411 LTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRERLLEIKFEDTE 470
TFYGPK+L +++VPT A FY+KELGV LTPP GK + + WKGL RLL+I+ D +
Sbjct: 418 FTFYGPKALDIHVVPTKTATAFYEKELGVLLTPPSGKDQMQEWKGLQSHRLLQIEINDAK 477
Query: 471 RPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVEVFVRNPMPVGKA 530
RPASDVAISGLGWIS+EP+RR+ L E+ L V VPKPVEVF+R +P+G +
Sbjct: 478 RPASDVAISGLGWISIEPIRRTRGTESRELNEAEHEIRLCVSVPKPVEVFLRPTLPIGTS 537
Query: 531 GAEWYQYRELTETELEVRPKWYF 553
G EWYQYRELT+ E EVRPKWYF
Sbjct: 538 GTEWYQYRELTDKEEEVRPKWYF 560
>gi|125537706|gb|EAY84101.1| hypothetical protein OsI_05484 [Oryza sativa Indica Group]
Length = 547
Score = 694 bits (1792), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/534 (67%), Positives = 435/534 (81%), Gaps = 20/534 (3%)
Query: 32 KPTLIVCKSTLSPETQFES-----DGAGAAAPTRGDRFLELQKAKE-AAKVVVRDS---K 82
KP L S+ SP + +GAG AAP+RGDRFL Q A E AA+V+ + +
Sbjct: 22 KPQLAPNPSSFSPGRAVSTAPATPEGAGPAAPSRGDRFLGTQLAAEPAARVLAPEDAERR 81
Query: 83 KKRKKKDKVLKVNSAVASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCR 142
++R++K K L + A+CYGCGAPLQT++ APGYV P TY+LKK+HHQ +TVLCGRC+
Sbjct: 82 RRRREKRKALARKPSAAACYGCGAPLQTADEAAPGYVHPATYDLKKRHHQLRTVLCGRCK 141
Query: 143 LLSHGHMITAVGGNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARI 202
LLSHGHMITAVGG+GGY GGKQFVSAD+LR+KLS+LR EKALI+KLVDIVDFNGSFLAR+
Sbjct: 142 LLSHGHMITAVGGHGGYPGGKQFVSADQLRDKLSYLRHEKALIIKLVDIVDFNGSFLARV 201
Query: 203 RDLAGANPIILVVTKVDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGV 262
RD AGANPIILV+TKVDLLP+ TD NC+GDWVVEA KKKLNVLSVHLTSSKSL G+ GV
Sbjct: 202 RDFAGANPIILVITKVDLLPRDTDLNCIGDWVVEAVVKKKLNVLSVHLTSSKSLVGVTGV 261
Query: 263 ASEIQKEKKGRDVYILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLG 322
SEIQ+EKKGRDVYILGSANVGKSAFI+A+L+ M +DP AA AQKY+PIQSAVPGTTLG
Sbjct: 262 ISEIQQEKKGRDVYILGSANVGKSAFISAMLRTMAYKDPVAAAAQKYKPIQSAVPGTTLG 321
Query: 323 PIQIDAFLGGGKLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEF 382
PIQI+AFLGGGKLYDTPGVHLHHRQAAV+HA+DLP+LAPQSRLR + F ++T+
Sbjct: 322 PIQIEAFLGGGKLYDTPGVHLHHRQAAVIHADDLPSLAPQSRLRARCFPA-NDTDV---- 376
Query: 383 KSHGLNGFTIFWGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLT 442
GL+G ++FWGGLVRID++K LP T LTFYGPK L++ MVPT +ADEFY++E+GVTLT
Sbjct: 377 ---GLSGNSLFWGGLVRIDVVKALPRTRLTFYGPKKLKINMVPTTEADEFYEREVGVTLT 433
Query: 443 PPIGKQKAEGWKGLDRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLE- 501
PP GK+KAEGW GL R L+IK+E+++RPA D+AISGLGW++VEP+ N D + E
Sbjct: 434 PPAGKEKAEGWVGLQVVRELQIKYEESDRPACDIAISGLGWVAVEPLGVPSSNPDESAEE 493
Query: 502 --STSGELHLAVHVPKPVEVFVRNPMPVGKAGAEWYQYRELTETELEVRPKWYF 553
+ SGELHL VHVPKPVE+FVR P+PVGKA ++WY+Y+ELTE E E+RPKW++
Sbjct: 494 EDNESGELHLRVHVPKPVEIFVRPPLPVGKAASQWYRYQELTEEEEELRPKWHY 547
>gi|242060118|ref|XP_002451348.1| hypothetical protein SORBIDRAFT_04g000530 [Sorghum bicolor]
gi|241931179|gb|EES04324.1| hypothetical protein SORBIDRAFT_04g000530 [Sorghum bicolor]
Length = 546
Score = 687 bits (1772), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 355/502 (70%), Positives = 419/502 (83%), Gaps = 15/502 (2%)
Query: 59 TRGDRFLELQKAKEAAKVVVR----DSKKKRKKKDKVL-KVNSAVASCYGCGAPLQTSES 113
TRGDRFL Q A EAA V+ D +++RK+K + L + S +ASCYGCGAPLQT+E
Sbjct: 53 TRGDRFLGRQLATEAAARVLAPDDADRRRRRKEKRRALSRKPSGLASCYGCGAPLQTAEE 112
Query: 114 DAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYAGGKQFVSADELRE 173
APGYVDPDTYELKK+HHQ +TVLCGRC+LLSHGHM+TAVGG+GGY GGKQFVSA++LRE
Sbjct: 113 AAPGYVDPDTYELKKRHHQLRTVLCGRCKLLSHGHMVTAVGGHGGYPGGKQFVSAEQLRE 172
Query: 174 KLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDLLPKGTDFNCVGDW 233
KLS+LR EKALIVKLVDIVDFNGSFLAR+RD AGANPIILV+TKVDLLP+ TD NC+GDW
Sbjct: 173 KLSYLRHEKALIVKLVDIVDFNGSFLARVRDFAGANPIILVITKVDLLPRDTDLNCIGDW 232
Query: 234 VVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGSANVGKSAFINALL 293
VVE+ KKKLNVLSVHLTSSKSL GI GV SEIQ+EKKGRDVYILGSANVGKSAFI+A+L
Sbjct: 233 VVESVVKKKLNVLSVHLTSSKSLVGITGVISEIQQEKKGRDVYILGSANVGKSAFISAML 292
Query: 294 KKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPGVHLHHRQAAVVHA 353
+ M +DP AA AQKY+PIQSAVPGTTLGPIQI+AFLGGGKLYDTPGVHLHHRQAAV+HA
Sbjct: 293 RTMAYKDPVAAAAQKYKPIQSAVPGTTLGPIQIEAFLGGGKLYDTPGVHLHHRQAAVIHA 352
Query: 354 EDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRIDLLKVLPETCLTF 413
+DLP+LAPQSRL+G+ F +T+ E L+G ++FW GLVRID++K LP LTF
Sbjct: 353 DDLPSLAPQSRLKGRCFPA---NDTDVE-----LSGNSLFWAGLVRIDVVKALPRARLTF 404
Query: 414 YGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRERLLEIKFEDTERPA 473
YGPK L++ MVPT +AD+FY+ E+GVTLTPP GK++AEGW+GL R L+IK+E+ +RPA
Sbjct: 405 YGPKKLKINMVPTTEADQFYETEVGVTLTPPTGKERAEGWQGLQGVRELKIKYEERDRPA 464
Query: 474 SDVAISGLGWISVEPVRRSIRNSDINLES--TSGELHLAVHVPKPVEVFVRNPMPVGKAG 531
D+AISGLGWISVEP +SD N+E GELHL VHVPKPVEVFVR P+PVGKA
Sbjct: 465 CDIAISGLGWISVEPSGVPSNSSDDNVEEEYDGGELHLVVHVPKPVEVFVRPPLPVGKAA 524
Query: 532 AEWYQYRELTETELEVRPKWYF 553
++WYQY+ELTE E E+RPKW++
Sbjct: 525 SQWYQYQELTEEEEELRPKWHY 546
>gi|357138391|ref|XP_003570776.1| PREDICTED: putative nitric oxide synthase-like [Brachypodium
distachyon]
Length = 562
Score = 684 bits (1764), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/513 (68%), Positives = 413/513 (80%), Gaps = 19/513 (3%)
Query: 52 GAGAAAPTRGDRFLELQKAKEAAKVVVRDSKKKRKKKDKVL--------KVNSAVASCYG 103
G G AAPTRGDR+L Q A AA VV + +K+ + K S VA CYG
Sbjct: 58 GVGPAAPTRGDRYLGRQMAAAAAARVVAPHEDAAEKRRRRKEKRRALAKKTPSGVACCYG 117
Query: 104 CGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYAGGK 163
CGAPL T E +PGYV+P TYELKK+H+Q +TVLCGRC+LLSHGHM+TAVGG+GGY GGK
Sbjct: 118 CGAPLHTDEEGSPGYVEPATYELKKRHNQLRTVLCGRCKLLSHGHMVTAVGGHGGYPGGK 177
Query: 164 QFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDLLPK 223
QFVSA+ELREKLS+LR EKALIVKLVDIVDFNGSFLARIRD AGANPI+LV+TKVDLLP+
Sbjct: 178 QFVSAEELREKLSYLRHEKALIVKLVDIVDFNGSFLARIRDFAGANPIVLVITKVDLLPR 237
Query: 224 GTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGSANV 283
TD NC+GDWVVEA +KKLNVLSVHLTSSKSL GI GV SEIQ+EKK RDVYILGSANV
Sbjct: 238 DTDLNCIGDWVVEAVVRKKLNVLSVHLTSSKSLVGITGVISEIQQEKKARDVYILGSANV 297
Query: 284 GKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPGVHL 343
GKSAFI+A+LK M +DP AA AQKY+PIQSAVPGTTLGPIQI+AFLGGGKLYDTPGVHL
Sbjct: 298 GKSAFISAMLKTMAYKDPVAAAAQKYKPIQSAVPGTTLGPIQIEAFLGGGKLYDTPGVHL 357
Query: 344 HHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRIDLL 403
HHRQAAV+HA+DLP+LAPQSRL+G+ F ++T+ GL+G T+FWGGLVRID++
Sbjct: 358 HHRQAAVIHADDLPSLAPQSRLKGRCFPA-NDTDV-------GLSGNTLFWGGLVRIDVV 409
Query: 404 KVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRERLLE 463
K LP T L FYGPK L + MVPT +ADEFY++E+GVTLTPP G+++AEGW GL R L+
Sbjct: 410 KALPRTRLAFYGPKKLNINMVPTTEADEFYEREVGVTLTPPTGQERAEGWCGLQGVRELQ 469
Query: 464 IKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTS---GELHLAVHVPKPVEVF 520
IK+E+ +RPA D+AISGLGWI+VEP+ + D + E GELHL VHVPKPVEVF
Sbjct: 470 IKYEELDRPACDIAISGLGWITVEPLGVPSSDPDGSAEEEGGAMGELHLRVHVPKPVEVF 529
Query: 521 VRNPMPVGKAGAEWYQYRELTETELEVRPKWYF 553
VR P+PVGKA ++WY+Y+ELTE E E+RPKW++
Sbjct: 530 VRAPLPVGKAASQWYRYQELTEAEEELRPKWHY 562
>gi|326519915|dbj|BAK03882.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 561
Score = 677 bits (1747), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 346/513 (67%), Positives = 411/513 (80%), Gaps = 18/513 (3%)
Query: 51 DGAGAAAPTRGDRFLELQKAKEAAKVVVRDSKKKRKKKDKVL-------KVNSAVASCYG 103
DG G AAPTRGD +L Q A A + +++ + K S VA CYG
Sbjct: 57 DGVGPAAPTRGDVYLGRQLAAAAGARTRAPEEDAERRRRRKEKRRALAKKTPSGVACCYG 116
Query: 104 CGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYAGGK 163
CGAPL T E +PG+V+P TY+LKK+H+Q KTVLCGRC+LLSHGHM+TAVGG+GGY GGK
Sbjct: 117 CGAPLHTGEEGSPGHVEPATYDLKKRHNQLKTVLCGRCKLLSHGHMVTAVGGHGGYPGGK 176
Query: 164 QFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDLLPK 223
QFVSA+ELREKLS+LR EKALIVKLVDIVDFNGSFLARIRD AGANPI+LV+TKVDLLP+
Sbjct: 177 QFVSAEELREKLSYLRHEKALIVKLVDIVDFNGSFLARIRDFAGANPIVLVITKVDLLPR 236
Query: 224 GTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGSANV 283
TD NC+GDWVVE+ +KKLNVLSVHLTSSKSL GI GV SEIQ+EKK RDVYILGSANV
Sbjct: 237 DTDLNCIGDWVVESVVRKKLNVLSVHLTSSKSLVGITGVISEIQQEKKARDVYILGSANV 296
Query: 284 GKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPGVHL 343
GKSAFI+A+LK M +DP AA AQKY+PIQSAVPGTTLGPIQI+AFLGGGKLYDTPGVHL
Sbjct: 297 GKSAFISAMLKTMAYKDPVAAAAQKYKPIQSAVPGTTLGPIQIEAFLGGGKLYDTPGVHL 356
Query: 344 HHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRIDLL 403
HHRQAAV+HA+DLP+LAPQSRL+G+ F ++T+ GL+G T+FWGGLVRID++
Sbjct: 357 HHRQAAVIHADDLPSLAPQSRLKGRCFPA-NDTDV-------GLSGNTLFWGGLVRIDIV 408
Query: 404 KVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRERLLE 463
K LP T LTFYGPK L + MVPT +ADEFY++E+GVTLTPP G+++AEGW GL R L+
Sbjct: 409 KALPRTRLTFYGPKKLSINMVPTTEADEFYKREVGVTLTPPTGQERAEGWCGLQGVRELQ 468
Query: 464 IKFEDTERPASDVAISGLGWISVEPVRRSIRNSD---INLESTSGELHLAVHVPKPVEVF 520
IK+E+ +RPASD+AISGLGWI+VEP+ + D SGELHL VHVPKPVEVF
Sbjct: 469 IKYEELDRPASDIAISGLGWIAVEPLGVPSSDPDSSIEEEGGGSGELHLRVHVPKPVEVF 528
Query: 521 VRNPMPVGKAGAEWYQYRELTETELEVRPKWYF 553
VR P+PVGKA ++WY+Y+ELTE E E+RPKW++
Sbjct: 529 VRAPLPVGKAASQWYRYQELTEVEEELRPKWHY 561
>gi|115443669|ref|NP_001045614.1| Os02g0104700 [Oryza sativa Japonica Group]
gi|75131025|sp|Q6YPG5.1|NOS_ORYSJ RecName: Full=Putative nitric oxide synthase
gi|40363768|dbj|BAD06278.1| putative GTPase [Oryza sativa Japonica Group]
gi|41052546|dbj|BAD07538.1| putative GTPase [Oryza sativa Japonica Group]
gi|113535145|dbj|BAF07528.1| Os02g0104700 [Oryza sativa Japonica Group]
Length = 547
Score = 673 bits (1737), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 347/502 (69%), Positives = 417/502 (83%), Gaps = 15/502 (2%)
Query: 59 TRGDRFLELQKAKEAAKVVVRDSK----KKRKKKDKVLKVNSAVASCYGCGAPLQTSESD 114
+RGDRFL Q A EAA V+ ++R++K K L + A+CYGCGAPLQT++
Sbjct: 54 SRGDRFLGTQLAAEAAARVLAPEDAERRRRRREKRKALARKPSAAACYGCGAPLQTADEA 113
Query: 115 APGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYAGGKQFVSADELREK 174
APGYV P TY+LKK+HHQ +TVLCGRC+LLSHGHMITAVGG+GGY GGKQFVSAD+LR+K
Sbjct: 114 APGYVHPATYDLKKRHHQLRTVLCGRCKLLSHGHMITAVGGHGGYPGGKQFVSADQLRDK 173
Query: 175 LSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDLLPKGTDFNCVGDWV 234
LS+LR EKALI+KLVDIVDFNGSFLAR+RD AGANPIILV+TKVDLLP+ TD NC+GDWV
Sbjct: 174 LSYLRHEKALIIKLVDIVDFNGSFLARVRDFAGANPIILVITKVDLLPRDTDLNCIGDWV 233
Query: 235 VEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGSANVGKSAFINALLK 294
VEA KKKLNVLSVHLTSSKSL G+ GV SEIQ+EKKGRDVYILGSANVGKSAFI+A+L+
Sbjct: 234 VEAVVKKKLNVLSVHLTSSKSLVGVTGVISEIQQEKKGRDVYILGSANVGKSAFISAMLR 293
Query: 295 KMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPGVHLHHRQAAVVHAE 354
M +DP AA AQKY+PIQSAVPGTTLGPIQI+AFLGGGKLYDTPGVHLHHRQAAV+HA+
Sbjct: 294 TMAYKDPVAAAAQKYKPIQSAVPGTTLGPIQIEAFLGGGKLYDTPGVHLHHRQAAVIHAD 353
Query: 355 DLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRIDLLKVLPETCLTFY 414
DLP+LAPQSRLR + F ++T+ GL+G ++FWGGLVRID++K LP T LTFY
Sbjct: 354 DLPSLAPQSRLRARCFPA-NDTDV-------GLSGNSLFWGGLVRIDVVKALPRTRLTFY 405
Query: 415 GPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRERLLEIKFEDTERPAS 474
GPK L++ MVPT +ADEFY++E+GVTLTPP GK+KAEGW GL R L+IK+E+++RPA
Sbjct: 406 GPKKLKINMVPTTEADEFYEREVGVTLTPPAGKEKAEGWVGLQGVRELQIKYEESDRPAC 465
Query: 475 DVAISGLGWISVEPVRRSIRNSDINLE---STSGELHLAVHVPKPVEVFVRNPMPVGKAG 531
D+AISGLGW++VEP+ N D + E + SGELHL VHVPKPVE+FVR P+PVGKA
Sbjct: 466 DIAISGLGWVAVEPLGVPSSNPDESAEEEDNESGELHLRVHVPKPVEIFVRPPLPVGKAA 525
Query: 532 AEWYQYRELTETELEVRPKWYF 553
++WY+Y+ELTE E E+RPKW++
Sbjct: 526 SQWYRYQELTEEEEELRPKWHY 547
>gi|293331105|ref|NP_001168044.1| uncharacterized protein LOC100381773 [Zea mays]
gi|223945667|gb|ACN26917.1| unknown [Zea mays]
Length = 540
Score = 671 bits (1730), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/500 (68%), Positives = 413/500 (82%), Gaps = 15/500 (3%)
Query: 59 TRGDRFLELQKAKEAAKVVV-----RDSKKKRKKKDKVLKVNSAVASCYGCGAPLQTSES 113
TRGDRFL Q A EAA V+ +++++K+ + + S +ASCYGCGAPLQT+E
Sbjct: 51 TRGDRFLGRQLATEAAARVLAPEDADRRRRRKEKRRALARKPSGLASCYGCGAPLQTAEE 110
Query: 114 DAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYAGGKQFVSADELRE 173
APGYVDPDTY+LKK+HHQ +TVLCGRC+LLSHGHM+TAVGG+GGY GGK+FVSA++LRE
Sbjct: 111 AAPGYVDPDTYQLKKRHHQLRTVLCGRCKLLSHGHMVTAVGGHGGYPGGKKFVSAEQLRE 170
Query: 174 KLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDLLPKGTDFNCVGDW 233
KLS+LR EKALIVKLVDIVDFNGSFLAR+RD AGANPIILV+TKVDLLP+ TD NC+GDW
Sbjct: 171 KLSYLRHEKALIVKLVDIVDFNGSFLARVRDFAGANPIILVITKVDLLPRDTDLNCIGDW 230
Query: 234 VVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGSANVGKSAFINALL 293
VVE+ KKKLNVLSVHLTSSKSL GI GV SEI +E+KGRDVYILGSANVGKSAFI+A+L
Sbjct: 231 VVESVVKKKLNVLSVHLTSSKSLVGITGVISEIHQERKGRDVYILGSANVGKSAFISAML 290
Query: 294 KKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPGVHLHHRQAAVVHA 353
+ M +DP AA AQKY+PIQSAVPGTTLGPIQI+AFLGGGKLYDTPGVHLHHRQAAV+HA
Sbjct: 291 RTMAYKDPVAAAAQKYKPIQSAVPGTTLGPIQIEAFLGGGKLYDTPGVHLHHRQAAVIHA 350
Query: 354 EDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRIDLLKVLPETCLTF 413
+DLP+LAPQSRL+G+ F +T+ E L+G ++FW GLVRID++K LP + LTF
Sbjct: 351 DDLPSLAPQSRLKGRCFPA---NDTDVE-----LSGNSLFWAGLVRIDVIKALPRSRLTF 402
Query: 414 YGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRERLLEIKFEDTERPA 473
YGPK L++ MVPT +AD+FY+ E+GVTLTPP GK++AEGW GL R L+IK+E+ +RPA
Sbjct: 403 YGPKKLKINMVPTTEADQFYETEVGVTLTPPTGKERAEGWTGLQGVRELKIKYEERDRPA 462
Query: 474 SDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVEVFVRNPMPVGKAGAE 533
D+AISGLGWISVEP + ++ GELHL VHVPKPVEVF+R P+PVGKA ++
Sbjct: 463 CDIAISGLGWISVEP--SGVPSNSAEEVYDGGELHLVVHVPKPVEVFMRPPLPVGKAASQ 520
Query: 534 WYQYRELTETELEVRPKWYF 553
WY+Y+ELTE E E+RPKW++
Sbjct: 521 WYRYQELTEEEEELRPKWHY 540
>gi|222622006|gb|EEE56138.1| hypothetical protein OsJ_05018 [Oryza sativa Japonica Group]
Length = 427
Score = 623 bits (1606), Expect = e-176, Method: Compositional matrix adjust.
Identities = 312/432 (72%), Positives = 371/432 (85%), Gaps = 11/432 (2%)
Query: 125 ELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYAGGKQFVSADELREKLSHLRREKAL 184
E KK+HHQ +TVLCGRC+LLSHGHMITAVGG+GGY GGKQFVSAD+LR+KLS+LR EKAL
Sbjct: 4 EQKKRHHQLRTVLCGRCKLLSHGHMITAVGGHGGYPGGKQFVSADQLRDKLSYLRHEKAL 63
Query: 185 IVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDLLPKGTDFNCVGDWVVEATTKKKLN 244
I+KLVDIVDFNGSFLAR+RD AGANPIILV+TKVDLLP+ TD NC+GDWVVEA KKKLN
Sbjct: 64 IIKLVDIVDFNGSFLARVRDFAGANPIILVITKVDLLPRDTDLNCIGDWVVEAVVKKKLN 123
Query: 245 VLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGSANVGKSAFINALLKKMGERDPAAA 304
VLSVHLTSSKSL G+ GV SEIQ+EKKGRDVYILGSANVGKSAFI+A+L+ M +DP AA
Sbjct: 124 VLSVHLTSSKSLVGVTGVISEIQQEKKGRDVYILGSANVGKSAFISAMLRTMAYKDPVAA 183
Query: 305 MAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPGVHLHHRQAAVVHAEDLPALAPQSR 364
AQKY+PIQSAVPGTTLGPIQI+AFLGGGKLYDTPGVHLHHRQAAV+HA+DLP+LAPQSR
Sbjct: 184 AAQKYKPIQSAVPGTTLGPIQIEAFLGGGKLYDTPGVHLHHRQAAVIHADDLPSLAPQSR 243
Query: 365 LRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRIDLLKVLPETCLTFYGPKSLQVYMV 424
LR + F ++T+ GL+G ++FWGGLVRID++K LP T LTFYGPK L++ MV
Sbjct: 244 LRARCFPA-NDTDV-------GLSGNSLFWGGLVRIDVVKALPRTRLTFYGPKKLKINMV 295
Query: 425 PTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRERLLEIKFEDTERPASDVAISGLGWI 484
PT +ADEFY++E+GVTLTPP GK+KAEGW GL R L+IK+E+++RPA D+AISGLGW+
Sbjct: 296 PTTEADEFYEREVGVTLTPPAGKEKAEGWVGLQGVRELQIKYEESDRPACDIAISGLGWV 355
Query: 485 SVEPVRRSIRNSDINLE---STSGELHLAVHVPKPVEVFVRNPMPVGKAGAEWYQYRELT 541
+VEP+ N D + E + SGELHL VHVPKPVE+FVR P+PVGKA ++WY+Y+ELT
Sbjct: 356 AVEPLGVPSSNPDESAEEEDNESGELHLRVHVPKPVEIFVRPPLPVGKAASQWYRYQELT 415
Query: 542 ETELEVRPKWYF 553
E E E+RPKW++
Sbjct: 416 EEEEELRPKWHY 427
>gi|148907645|gb|ABR16951.1| unknown [Picea sitchensis]
Length = 601
Score = 601 bits (1549), Expect = e-169, Method: Compositional matrix adjust.
Identities = 324/513 (63%), Positives = 391/513 (76%), Gaps = 15/513 (2%)
Query: 54 GAAAPTRGDRFLELQKAKEAAKVVVRDSKKKRKKKDKVLKVNSAVASCYGCGAPLQTSES 113
G +A +RG FLE A + ++K+KRKKK K + S CYGCGAPLQ+ E
Sbjct: 91 GPSAKSRGQIFLE--NALDKHDSAQSNTKEKRKKKKKKVPEMSTEPVCYGCGAPLQSVEV 148
Query: 114 DAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYAGGKQFVSADELRE 173
D PGYV +TYELKKKH Q ++VLCGRCRLLSHGHM+TAVGG+GGY+GGKQF+SA++LRE
Sbjct: 149 DGPGYVTLETYELKKKHRQLRSVLCGRCRLLSHGHMLTAVGGHGGYSGGKQFISAEQLRE 208
Query: 174 KLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDLLPKGTDFNCVGDW 233
KLSHLR +KALIVKLVDIVDFNGSFLAR+RDL GANPII+V TKVDLLPKGTD + VGDW
Sbjct: 209 KLSHLRHDKALIVKLVDIVDFNGSFLARVRDLVGANPIIMVATKVDLLPKGTDLSVVGDW 268
Query: 234 VVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGSANVGKSAFINALL 293
+VEAT +KKLNVLS+HLTSSKSL+G VGV SEIQ+++KGRDVY+LGSANVGKSAFINALL
Sbjct: 269 IVEATMRKKLNVLSIHLTSSKSLSGFVGVVSEIQQQRKGRDVYVLGSANVGKSAFINALL 328
Query: 294 KKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPGVHLHHRQAAVVHA 353
K M +D AA A++Y+PIQSAVPGTTLGPIQIDAF G GKLYDTPGVHLHHRQAAVVHA
Sbjct: 329 KTMALKDFVAAAARRYKPIQSAVPGTTLGPIQIDAFHGEGKLYDTPGVHLHHRQAAVVHA 388
Query: 354 EDLPALAPQSRLRGQSFAVISETETNNEF----------KSHGLNGFTIFWGGLVRIDLL 403
EDLP LAPQSRL+G + ++ + T+ N E +GLNG +IFWGG+VRID++
Sbjct: 389 EDLPLLAPQSRLKGITISIDALTKENQELFYTSKTTSCTVDNGLNGLSIFWGGIVRIDVV 448
Query: 404 KVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRERLLE 463
KV L YGPK +Q+ +VPT +A+EFY KELG L PP GK KA+ W GL ++
Sbjct: 449 KVPLHIRLIMYGPKGVQIKVVPTSEAEEFYHKELGGALKPPTGKDKAKNWPGLKGSHPID 508
Query: 464 IKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSG---ELHLAVHVPKPVEVF 520
+K + RP D+AISGLGWI++EP + +L++ S +LHL VHV KPVEVF
Sbjct: 509 VKMGNNSRPVCDIAISGLGWIAIEPGPSTNVTGAEDLDTLSTIDKQLHLLVHVAKPVEVF 568
Query: 521 VRNPMPVGKAGAEWYQYRELTETELEVRPKWYF 553
VR PMP+G+ G+ WY+Y ELTE E E RPK +
Sbjct: 569 VRAPMPIGRLGSTWYEYSELTEEEEETRPKVSY 601
>gi|224139212|ref|XP_002326796.1| predicted protein [Populus trichocarpa]
gi|222834118|gb|EEE72595.1| predicted protein [Populus trichocarpa]
Length = 380
Score = 583 bits (1504), Expect = e-164, Method: Compositional matrix adjust.
Identities = 301/380 (79%), Positives = 335/380 (88%), Gaps = 8/380 (2%)
Query: 1 MALKTLTTFLSPLSLPHHFTNSTPKFLKTYTKPTLIVCKSTLSPETQFES-------DGA 53
MA K+L+ FL PLSLPH+ T STPKFL+ YTKP+ I+CKS +P S DG
Sbjct: 1 MAPKSLSAFLFPLSLPHNLTYSTPKFLRIYTKPSPILCKSQQTPTATAHSSVSIPDQDGT 60
Query: 54 GAAAPTRGDRFLELQKAKEAAKVVVRDSKK-KRKKKDKVLKVNSAVASCYGCGAPLQTSE 112
GAAAP+RGD+FLE QK+ EAAK+V+++ KK KR++K K LK+N+AVASCYGCGAPL T +
Sbjct: 61 GAAAPSRGDQFLERQKSFEAAKLVMKEVKKSKRREKGKALKLNTAVASCYGCGAPLHTLD 120
Query: 113 SDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYAGGKQFVSADELR 172
DAPG+VDPDTYELKK+H Q +TVLCGRCRLLSHGHMITAVGGNGGY+GGKQFVSADELR
Sbjct: 121 PDAPGFVDPDTYELKKRHRQLRTVLCGRCRLLSHGHMITAVGGNGGYSGGKQFVSADELR 180
Query: 173 EKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDLLPKGTDFNCVGD 232
EKLSHLR EKALIVKLVD+VDFNGSFLAR+RDL GANPIILVVTKVDLLP+ TD NCVGD
Sbjct: 181 EKLSHLRHEKALIVKLVDVVDFNGSFLARLRDLVGANPIILVVTKVDLLPRDTDLNCVGD 240
Query: 233 WVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGSANVGKSAFINAL 292
WVVEATTKKKL+VLSVHLTSSKSL GI GV SEIQ+EKKGRDVYILGSANVGKSAFI+AL
Sbjct: 241 WVVEATTKKKLSVLSVHLTSSKSLVGIAGVVSEIQREKKGRDVYILGSANVGKSAFISAL 300
Query: 293 LKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPGVHLHHRQAAVVH 352
LK M RDPAAA A+KY+PIQSAVPGTTLGPIQIDAFLGGGKLYDTPGVHLHHRQAAVVH
Sbjct: 301 LKTMALRDPAAAAARKYKPIQSAVPGTTLGPIQIDAFLGGGKLYDTPGVHLHHRQAAVVH 360
Query: 353 AEDLPALAPQSRLRGQSFAV 372
+EDLPALAP+SRL+GQSF V
Sbjct: 361 SEDLPALAPRSRLKGQSFPV 380
>gi|302767618|ref|XP_002967229.1| hypothetical protein SELMODRAFT_87746 [Selaginella moellendorffii]
gi|300165220|gb|EFJ31828.1| hypothetical protein SELMODRAFT_87746 [Selaginella moellendorffii]
Length = 599
Score = 538 bits (1385), Expect = e-150, Method: Compositional matrix adjust.
Identities = 266/503 (52%), Positives = 354/503 (70%), Gaps = 20/503 (3%)
Query: 58 PTRGDRFLELQKAKEAAKVVVRDSKKKRKK-KDKVLKVNSAVASCYGCGAPLQTSESDAP 116
P+RGD+FLE QK ++ A V + +K+++KK K +V+K+ S CYGCGA LQ ++ ++P
Sbjct: 104 PSRGDKFLEEQKVRDQALVEKQAAKREKKKGKSQVVKLKSLEPCCYGCGAVLQYTQENSP 163
Query: 117 GYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYAGGKQFVSADELREKLS 176
GY++ +TYELKKKHHQ K+VLC RC+L+ HG +I AVGG G Y K FV+A+ELR +L+
Sbjct: 164 GYINAETYELKKKHHQLKSVLCSRCQLMCHGKLIPAVGGYGIYGREKGFVTAEELRAQLA 223
Query: 177 HLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDLLPKGTDFNCVGDWVVE 236
H+R E+ L++KLVDIVDF+GSFL RIRDL G NPI+LV TKVDLLP+GTD VGDW+VE
Sbjct: 224 HIREERVLVLKLVDIVDFSGSFLTRIRDLVGNNPIVLVATKVDLLPEGTDLAAVGDWIVE 283
Query: 237 ATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGSANVGKSAFINALLKKM 296
+T +KKLNV+SVHLTS+K GI + EI +E++GRDVYILG+ANVGKSAFI++LLK+M
Sbjct: 284 STQRKKLNVISVHLTSAKYFMGITNIVKEIHRERQGRDVYILGAANVGKSAFISSLLKEM 343
Query: 297 GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPGVHLHHRQAAVVHAEDL 356
RDP AA+A+K +P+QS +PGTT+GPI IDAF GG +YDTPGVHLHHR + +DL
Sbjct: 344 AARDPIAAVARKRKPVQSVLPGTTVGPISIDAFASGGSMYDTPGVHLHHRIETAISPDDL 403
Query: 357 PALAPQSRLRGQS-FAVISETETNNEFKSH--GLNGFTIFWGGLVRIDLLKVLPETCLTF 413
P+L P RLRG S F+ + +E S+ L G T+FWGG+ RID+LK T LTF
Sbjct: 404 PSLFPARRLRGYSIFSEALKQAEKDEVISNVQDLTGTTMFWGGIARIDVLKAPQNTRLTF 463
Query: 414 YGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRERLLEIKFEDTERPA 473
Y +L+V+ V T +ADEFY++ELG TL PP ++A W GLD ++DT RP
Sbjct: 464 YASAALRVHKVLTSEADEFYKRELGKTLVPP-SDERASAWPGLDHRNKFTFDYDDT-RPV 521
Query: 474 SDVAISGLGWISVEPVRRSIRNSDINLESTSGE---LHLAVHVPKPVEVFVRNPMPVGKA 530
D+AISGLGW+ +E L++ SG L L V+VP+ +EVF R +PVG
Sbjct: 522 GDIAISGLGWMKME-----------FLQTESGVEDCLELEVYVPRGIEVFRRPAIPVGAN 570
Query: 531 GAEWYQYRELTETELEVRPKWYF 553
WY + ELT + + RP+ Y+
Sbjct: 571 THSWYSFSELTAEQEKTRPRLYY 593
>gi|302754142|ref|XP_002960495.1| hypothetical protein SELMODRAFT_164227 [Selaginella moellendorffii]
gi|300171434|gb|EFJ38034.1| hypothetical protein SELMODRAFT_164227 [Selaginella moellendorffii]
Length = 599
Score = 535 bits (1379), Expect = e-149, Method: Compositional matrix adjust.
Identities = 265/503 (52%), Positives = 352/503 (69%), Gaps = 20/503 (3%)
Query: 58 PTRGDRFLELQKAKEAAKVVVRDSKKKRKK-KDKVLKVNSAVASCYGCGAPLQTSESDAP 116
P+RGD+FLE QK ++ A V +K+++KK K +V+K+ S CYGCGA LQ ++ + P
Sbjct: 104 PSRGDKFLEEQKVRDQALVEKLAAKREKKKGKSQVVKLKSLEPCCYGCGAVLQYTQENTP 163
Query: 117 GYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYAGGKQFVSADELREKLS 176
GY++ +TYELKKKHHQ K+VLC RC+L+ HG +I AVGG G Y K FV+A+ELR +L+
Sbjct: 164 GYINAETYELKKKHHQLKSVLCSRCQLMCHGKLIPAVGGYGIYGREKGFVTAEELRAQLA 223
Query: 177 HLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDLLPKGTDFNCVGDWVVE 236
H+R E+ L++KLVDIVDF+GSFL R+RDL G NPI+LV TKVDLLP+GTD VGDW+VE
Sbjct: 224 HIREERVLVLKLVDIVDFSGSFLTRVRDLVGNNPIVLVATKVDLLPEGTDLAAVGDWIVE 283
Query: 237 ATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGSANVGKSAFINALLKKM 296
+T +KKLNV+SVHLTS+K GI + EI +E++GRDVYILG+ANVGKSAFI++LLK+M
Sbjct: 284 STQRKKLNVISVHLTSAKYFMGITNIVKEIHRERQGRDVYILGAANVGKSAFISSLLKEM 343
Query: 297 GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPGVHLHHRQAAVVHAEDL 356
RDP AA+A+K +P+QS +PGTT+GPI IDAF GG +YDTPGVHLHHR + +DL
Sbjct: 344 AARDPIAAVARKRKPVQSVLPGTTVGPISIDAFASGGSMYDTPGVHLHHRIETAISPDDL 403
Query: 357 PALAPQSRLRGQS-FAVISETETNNEFKSH--GLNGFTIFWGGLVRIDLLKVLPETCLTF 413
P+L P RLRG S F+ + +E S+ L G T+FWGG+ RID+LK T LTF
Sbjct: 404 PSLFPARRLRGYSIFSEALKQAEKDEVISNVQDLTGTTMFWGGIARIDVLKAPQNTRLTF 463
Query: 414 YGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRERLLEIKFEDTERPA 473
Y +L+V+ V T +ADEFY++ELG TL PP ++A W GLD ++DT RP
Sbjct: 464 YASAALRVHKVLTSEADEFYKRELGKTLVPP-SDERASAWPGLDHRNKFTFDYDDT-RPV 521
Query: 474 SDVAISGLGWISVEPVRRSIRNSDINLESTSG---ELHLAVHVPKPVEVFVRNPMPVGKA 530
D+AISGLGW+ +E L++ SG L L V+VP+ +EVF R +PVG
Sbjct: 522 GDIAISGLGWMRME-----------FLQTESGVEDSLELEVYVPRGIEVFRRPAIPVGAN 570
Query: 531 GAEWYQYRELTETELEVRPKWYF 553
WY + ELT + + RP+ Y+
Sbjct: 571 THSWYSFSELTAEQEKTRPRLYY 593
>gi|5541712|emb|CAB51217.1| putative protein [Arabidopsis thaliana]
Length = 441
Score = 523 bits (1346), Expect = e-145, Method: Compositional matrix adjust.
Identities = 289/407 (71%), Positives = 329/407 (80%), Gaps = 18/407 (4%)
Query: 1 MALKTLTTFLSPLSLPHHFTNSTPKFLKTYTKPTL-IVCKSTLS---PETQFESDGAGAA 56
MAL+TL+TF S L H T P Y PT IVCKS + P + E DG AA
Sbjct: 1 MALRTLSTFPS-LPRRHTTTRREPNLTVIYRNPTTSIVCKSIANSEPPVSLSERDGFAAA 59
Query: 57 APTRGDRFLELQKAKEAAKVVVRDSKKKRKKKDKVLK----VNSAVASCYGCGAPLQTSE 112
APT G+RFLE Q+A EA KVV ++ KK++KKK + + V+++V+ CYGCGAPLQTS+
Sbjct: 60 APTPGERFLENQRAHEAQKVVKKEIKKEKKKKKEEIIARKVVDTSVSCCYGCGAPLQTSD 119
Query: 113 SDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYAGGKQFVSADELR 172
D+PG+VD TYELKKKHHQ +T++CGRC+LLSHGHMITAVGGNGGY GGKQFVSADELR
Sbjct: 120 VDSPGFVDLVTYELKKKHHQLRTMICGRCQLLSHGHMITAVGGNGGYPGGKQFVSADELR 179
Query: 173 EKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDLLPKGTDFNCVGD 232
EKLSHLR EKALIVKLVDIVDFNGSFLAR+RDL GANPIILV+TK+DLLPKGTD NC+GD
Sbjct: 180 EKLSHLRHEKALIVKLVDIVDFNGSFLARVRDLVGANPIILVITKIDLLPKGTDMNCIGD 239
Query: 233 WVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGSANVGKSAFINAL 292
WVVE T +KKLNVLSVHLTSSKSL G+ GVASEIQKEKKGRDVYILG+ANVGKSAFINAL
Sbjct: 240 WVVEVTMRKKLNVLSVHLTSSKSLDGVSGVASEIQKEKKGRDVYILGAANVGKSAFINAL 299
Query: 293 LKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPGVHLHHRQAAVVH 352
LK M ERDP AA AQKY+PIQSAVPGTTLGPIQI+AF+GG KLYDTPGVHLHHRQAAVVH
Sbjct: 300 LKTMAERDPVAAAAQKYKPIQSAVPGTTLGPIQINAFVGGEKLYDTPGVHLHHRQAAVVH 359
Query: 353 AEDLPALAPQSRLRGQSFAV-------ISE--TETNNEFKSHGLNGF 390
++DLPALAPQ+RLRGQSF V IS T++++ K LNG
Sbjct: 360 SDDLPALAPQNRLRGQSFDVSLLYYGQISTLPTQSSSSPKGESLNGL 406
>gi|167998362|ref|XP_001751887.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696985|gb|EDQ83322.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 455
Score = 508 bits (1309), Expect = e-141, Method: Compositional matrix adjust.
Identities = 267/450 (59%), Positives = 329/450 (73%), Gaps = 21/450 (4%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
CYGCGA LQ+S ++APG++ D +E+KKKHHQ TVLCGRC+LLS G MI AV GNGGY
Sbjct: 23 CYGCGAVLQSSTAEAPGFLSLDIFEVKKKHHQLGTVLCGRCQLLSQGAMIPAVSGNGGYG 82
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
GK FVS+DELR +L+HLR EKALIVKLVDIVDFNGSFL R+RDL G+NPIILVVTKVDL
Sbjct: 83 EGKGFVSSDELRAQLTHLRYEKALIVKLVDIVDFNGSFLTRVRDLVGSNPIILVVTKVDL 142
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPKGTD VGDWV++AT KKLNV+SVHLTS+K+ GI G ++ + ++++GRDVY+LGS
Sbjct: 143 LPKGTDLAAVGDWVIQATIAKKLNVISVHLTSAKAATGISGFSALMLRQRQGRDVYVLGS 202
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
ANVGKSAFI+ LL+ MGERDP AA AQ++RPIQSA+PGTTLGPIQIDAF GGG LYDTPG
Sbjct: 203 ANVGKSAFISTLLRDMGERDPIAAAAQRFRPIQSAMPGTTLGPIQIDAFSGGGSLYDTPG 262
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
VHLHHR AA V EDLP LAP+ RL G+ +IS + S L G +IFWGG+VRI
Sbjct: 263 VHLHHRLAAAVSPEDLPLLAPRKRLAGR---LISAPD-----PSLSLVGQSIFWGGVVRI 314
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D+L+ LTFYGP S+ V T +A+ FY+KE+GV L PP G +A+ W GL +
Sbjct: 315 DVLEAPENIALTFYGPNSIPVLGTLTPQAEVFYEKEVGVRLFPP-GGDRAKNWPGLVNQE 373
Query: 461 LLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELH----LAVHVPKP 516
++ +RPA D+AISGLGWI+V V E +G ++ L V+ PK
Sbjct: 374 VVRFTVNSRKRPAGDLAISGLGWIAVGVVYSE--------EEETGYINHVVRLRVYTPKA 425
Query: 517 VEVFVRNPMPVGKAGAEWYQYRELTETELE 546
VEVF+R +PVG A+WY+Y E+ + E E
Sbjct: 426 VEVFMRPSIPVGVNAADWYEYMEVEDDESE 455
>gi|413926893|gb|AFW66825.1| hypothetical protein ZEAMMB73_244891 [Zea mays]
Length = 375
Score = 475 bits (1222), Expect = e-131, Method: Compositional matrix adjust.
Identities = 238/317 (75%), Positives = 277/317 (87%), Gaps = 5/317 (1%)
Query: 59 TRGDRFLELQKAKEAAKVVV-----RDSKKKRKKKDKVLKVNSAVASCYGCGAPLQTSES 113
TRGDRFL Q A EAA V+ +++++K+ + + S +ASCYGCGAPLQT+E
Sbjct: 51 TRGDRFLGRQLATEAAARVLAPEDADRRRRRKEKRRALARKPSGLASCYGCGAPLQTAEE 110
Query: 114 DAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYAGGKQFVSADELRE 173
APGYVDPDTY+LKK+HHQ +TVLCGRC+LLSHGHM+TAVGG+GGY GGK+FVSA++LRE
Sbjct: 111 AAPGYVDPDTYQLKKRHHQLRTVLCGRCKLLSHGHMVTAVGGHGGYPGGKKFVSAEQLRE 170
Query: 174 KLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDLLPKGTDFNCVGDW 233
KLS+LR EKALIVKLVDIVDFNGSFLAR+RD AGANPIILV+TKVDLLP+ TD NC+GDW
Sbjct: 171 KLSYLRHEKALIVKLVDIVDFNGSFLARVRDFAGANPIILVITKVDLLPRDTDLNCIGDW 230
Query: 234 VVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGSANVGKSAFINALL 293
VVE+ KKKLNVLSVHLTSSKSL GI GV SEI +E+KGRDVYILGSANVGKSAFI+A+L
Sbjct: 231 VVESVVKKKLNVLSVHLTSSKSLVGITGVISEIHQERKGRDVYILGSANVGKSAFISAML 290
Query: 294 KKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPGVHLHHRQAAVVHA 353
+ M +DP AA AQKY+PIQSAVPGTTLGPIQI+AFLGGGKLYDTPGVHLHHRQAAV+HA
Sbjct: 291 RTMAYKDPVAAAAQKYKPIQSAVPGTTLGPIQIEAFLGGGKLYDTPGVHLHHRQAAVIHA 350
Query: 354 EDLPALAPQSRLRGQSF 370
+DLP+LAPQSRL+G+ F
Sbjct: 351 DDLPSLAPQSRLKGRCF 367
>gi|413926891|gb|AFW66823.1| hypothetical protein ZEAMMB73_244891 [Zea mays]
Length = 252
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 166/262 (63%), Positives = 209/262 (79%), Gaps = 10/262 (3%)
Query: 292 LLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPGVHLHHRQAAVV 351
+L+ M +DP AA AQKY+PIQSAVPGTTLGPIQI+AFLGGGKLYDTPGVHLHHRQAAV+
Sbjct: 1 MLRTMAYKDPVAAAAQKYKPIQSAVPGTTLGPIQIEAFLGGGKLYDTPGVHLHHRQAAVI 60
Query: 352 HAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRIDLLKVLPETCL 411
HA+DLP+LAPQSRL+G+ F +T+ E L+G ++FW GLVRID++K LP + L
Sbjct: 61 HADDLPSLAPQSRLKGRCFPA---NDTDVE-----LSGNSLFWAGLVRIDVIKALPRSRL 112
Query: 412 TFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRERLLEIKFEDTER 471
TFYGPK L++ MVPT +AD+FY+ E+GVTLTPP GK++AEGW GL R L+IK+E+ +R
Sbjct: 113 TFYGPKKLKINMVPTTEADQFYETEVGVTLTPPTGKERAEGWTGLQGVRELKIKYEERDR 172
Query: 472 PASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVEVFVRNPMPVGKAG 531
PA D+AISGLGWISVEP + ++ GELHL VHVPKPVEVF+R P+PVGKA
Sbjct: 173 PACDIAISGLGWISVEP--SGVPSNSAEEVYDGGELHLVVHVPKPVEVFMRPPLPVGKAA 230
Query: 532 AEWYQYRELTETELEVRPKWYF 553
++WY+Y+ELTE E E+RPKW++
Sbjct: 231 SQWYRYQELTEEEEELRPKWHY 252
>gi|326524287|dbj|BAK00527.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 340
Score = 303 bits (776), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 162/237 (68%), Positives = 186/237 (78%), Gaps = 7/237 (2%)
Query: 51 DGAGAAAPTRGDRFLELQKAKEAAKVVVRDSKKKRKKKDKVL-------KVNSAVASCYG 103
DG G AAPTRGD +L Q A A + +++ + K S VA CYG
Sbjct: 57 DGVGPAAPTRGDVYLGRQLAAAAGARTRAPEEDAERRRRRKEKRRALAKKTPSGVACCYG 116
Query: 104 CGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYAGGK 163
CGAPL T E +PG+V+P TY+LKK+H+Q KTVLCGRC+LLSHGHM+TAVGG+GGY GGK
Sbjct: 117 CGAPLHTGEEGSPGHVEPATYDLKKRHNQLKTVLCGRCKLLSHGHMVTAVGGHGGYPGGK 176
Query: 164 QFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDLLPK 223
QFVSA+ELREKLS+LR EKALIVKLVDIVDFNGSFLARIRD AGANPI+LV+TKVDLLP+
Sbjct: 177 QFVSAEELREKLSYLRHEKALIVKLVDIVDFNGSFLARIRDFAGANPIVLVITKVDLLPR 236
Query: 224 GTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
TD NC+GDWVVE+ +KKLNVLSVHLTSSKSL GI GV SEIQ+EKK RDVYIL S
Sbjct: 237 DTDLNCIGDWVVESVVRKKLNVLSVHLTSSKSLVGITGVISEIQQEKKARDVYILVS 293
>gi|384252820|gb|EIE26295.1| hypothetical protein COCSUDRAFT_26953 [Coccomyxa subellipsoidea
C-169]
Length = 467
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 172/437 (39%), Positives = 244/437 (55%), Gaps = 48/437 (10%)
Query: 100 SCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVG---GN 156
SCYGCGA LQT E+ APGYV + YE K++H Q T++C RC+ LS+G M+ V G
Sbjct: 65 SCYGCGAALQTEEAAAPGYVSVEKYEEKRRHRQLGTLVCRRCQDLSNGAMVPGVADVWGR 124
Query: 157 GGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVT 216
K VS ++LR +L+ +R E+A+ V LVD++D +GSFL+R+RDL G NP+ LV T
Sbjct: 125 DSEEDLKVLVSPEQLRTQLARVREERAVAVLLVDLLDASGSFLSRVRDLIGKNPVFLVGT 184
Query: 217 KVDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVY 276
KVDLLPKGT+ V W+ + +K+L+ ++ L SS++ GI VA ++ E++GRDVY
Sbjct: 185 KVDLLPKGTNTEEVAQWLERSAAQKRLSPIATFLVSSRTREGIAQVAKAVRIERRGRDVY 244
Query: 277 ILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLY 336
I+GSANVGKSAF+ ++ +PA +A + P++SA+PGTTL I ++ F GG L+
Sbjct: 245 IMGSANVGKSAFVRCAECQIIVLEPAIGIA-GHLPVESAMPGTTLQLIALNTFEAGGTLF 303
Query: 337 DTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGG 396
DTPGVHL HR ++ L P+ +L+ F S E + + + + FWGG
Sbjct: 304 DTPGVHLQHRLQHLLEPALTKQLLPKGKLK--PFLPPSPQELAFQAQLGTSSPTSYFWGG 361
Query: 397 LVRIDLLKVLPETCLTFYGPKSLQVYMVP-----TDKADEFYQKELGVTLTPPIGKQKAE 451
LVRID++ T L FYGP++++V P +D K VTL
Sbjct: 362 LVRIDIVDAPVSTSLAFYGPRTMRVTSSPLLDDSSDHLSAVSAKSADVTL-----NLSGA 416
Query: 452 GWKGLDRERLLEIKFEDTERPASDVAISGL-GWISVEPVRRSIRNSDINLESTSGELHLA 510
G P +DVA+SGL GW++ I E G L L
Sbjct: 417 G-------------------PVADVAVSGLPGWVA------------IRTEQNGGRLVLR 445
Query: 511 VHVPKPVEVFVRNPMPV 527
V P +E +VR P+PV
Sbjct: 446 VWAPAGIEAYVRPPLPV 462
>gi|308802972|ref|XP_003078799.1| Predicted GTPases (ISS) [Ostreococcus tauri]
gi|116057252|emb|CAL51679.1| Predicted GTPases (ISS) [Ostreococcus tauri]
Length = 588
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 155/396 (39%), Positives = 225/396 (56%), Gaps = 31/396 (7%)
Query: 99 ASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGG 158
A CYGCG +QT +D GYVD TYE K H Q+ +LC RC LS+G + AV G GG
Sbjct: 58 ARCYGCGVGVQTRSNDVAGYVDVATYERKATHGQWDMMLCARCAKLSNGAYVNAVEGQGG 117
Query: 159 YAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKV 218
++ ELR++L +R +KAL+VK+VD DF+GSFL ++RD+ G NPI+LVVTK+
Sbjct: 118 VKASPGLITPKELRDQLKPIREKKALVVKVVDATDFHGSFLKKVRDVVGGNPIVLVVTKI 177
Query: 219 DLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYIL 278
DLL D + + WV + ++L + + L SS+ +G+ ++ +E+ GRDVY++
Sbjct: 178 DLLGNAVDHDALERWVAKEAETRRLTLAGIALVSSRRGSGMREAVLQMMRERNGRDVYVI 237
Query: 279 GSANVGKSAFINALLKKMGERDPAAAMAQKYR-PIQSAVPGTTLGPIQIDAFLGGGKLYD 337
G+ANVGKS+FI A ++++ R A R P+ SA+PGTTLG I + AF G G L+D
Sbjct: 238 GAANVGKSSFIRAAMEEL--RSAGNYFAPTKRLPVASAMPGTTLGVIPLKAFEGKGVLFD 295
Query: 338 TPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGL 397
TPGV LHHR +++ AEDL + S L+ + E F S G++++WG
Sbjct: 296 TPGVFLHHRLNSLLSAEDLSEMKLGSSLK-KFVPPTPECAEPPGFAS--FKGYSLYWGSF 352
Query: 398 VRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFY--QKELGVTLTPPIGKQKAEGWKG 455
VR+D+L+ P F+GPKS +V ++ T E Q+E + L
Sbjct: 353 VRVDVLECPPNVTFGFFGPKSTRVSLMKTADVPETISGQEEAALRL-------------- 398
Query: 456 LDRERLLEIKF---EDTERPASDVAISGL-GWISVE 487
+ EI F + P D+++SGL GWI VE
Sbjct: 399 -----VQEIDFLPPMHVDGPLVDLSVSGLGGWIRVE 429
>gi|145345515|ref|XP_001417253.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144577480|gb|ABO95546.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 401
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 157/431 (36%), Positives = 236/431 (54%), Gaps = 37/431 (8%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
CYGCG LQT + GYVD Y K H + +LC RC LS+G + AV G GG
Sbjct: 1 CYGCGVALQTKDESIAGYVDAAEYATKAVHRHYDMMLCARCAALSNGKFVNAVEGQGGLK 60
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ +LR++L +R +KAL+VK+VD+ DF+GSFL ++RD+ G NPI+LVVTKVDL
Sbjct: 61 AAPGLITPKQLRDQLKPIREKKALVVKVVDVTDFHGSFLKKVRDVVGGNPILLVVTKVDL 120
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
L TD + + +WV ++L++ + L SS+ +G+ ++ +E+ GRDVY+LG+
Sbjct: 121 LDSKTDLDALVEWVGREAETRRLSLAGIALVSSRKGSGMRDAVLQMMRERNGRDVYVLGA 180
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYR-PIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
ANVGKS+FI A + ++ R A R P+ SA+PGTTLG I + AF G G L+DTP
Sbjct: 181 ANVGKSSFIRAAMDEL--RSAGNYFAPSKRLPVASAMPGTTLGVIPLKAFEGKGILFDTP 238
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ LHHR +++ +DL + + L+ + E F S G+++ WG VR
Sbjct: 239 GLFLHHRLNSLLGPDDLSTMKLGASLK-KFVPKTPECAEPPGFDS--FQGYSLCWGSFVR 295
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
+D+++ P +FYGPKS +V ++ T PP + E +
Sbjct: 296 VDVVRCPPNVAFSFYGPKSQRVDIIKTSD-------------VPPTTPGQEEAALRV--- 339
Query: 460 RLLEIKF---EDTERPASDVAISGL-GWISVEPVRRSIRNSDINLESTSGELHLAVHVPK 515
+ EI F + P D+++SGL GWI VE ++ D G + V+ +
Sbjct: 340 -VNEIDFVPPTNVVGPLVDLSVSGLGGWIRVE---KTDSRGD-------GAILARVYGVR 388
Query: 516 PVEVFVRNPMP 526
+EVF R+ MP
Sbjct: 389 GLEVFARDVMP 399
>gi|302831095|ref|XP_002947113.1| hypothetical protein VOLCADRAFT_120437 [Volvox carteri f.
nagariensis]
gi|300267520|gb|EFJ51703.1| hypothetical protein VOLCADRAFT_120437 [Volvox carteri f.
nagariensis]
Length = 926
Score = 258 bits (658), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 182/530 (34%), Positives = 256/530 (48%), Gaps = 91/530 (17%)
Query: 59 TRGDRFLELQK-AKEAAKVVVRDSKKKRKKKDKVLKVNSAVASCYGCGAPLQTSESDAPG 117
T R E ++ A++AA++ R S R ++ CYGCGA LQT S G
Sbjct: 117 TGSSRMSEQERVARKAARLADRSSTAARNRE----------GCCYGCGAILQTEVSRGAG 166
Query: 118 YVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAV-------------GGNGGYAG--- 161
YV P+ Y ++K+ Q VLC RC L +G MI AV GG + G
Sbjct: 167 YVAPEKYAVRKQRRQLDKVLCQRCSDLCNGAMIPAVQDFPQKLQLRQLVGGATTFEGIES 226
Query: 162 ----------------------------------------GKQFVSADELREKLSHLRRE 181
GK VS ++LR +L L
Sbjct: 227 GDGILGREGLRDQSVKVVGPSAGGTSSNAVGADASTANLLGKVLVSPEQLRGQLKTLALR 286
Query: 182 KALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDLLPKGTDFNCVGDWVVEATTKK 241
AL+V LVD+ D GS L R+RD+ G NPI+LV TK+DLLP+G + V +W+ A K
Sbjct: 287 AALVVLLVDLTDVAGSLLTRVRDMVGRNPIVLVGTKMDLLPEGCRPSDVAEWLSGAAATK 346
Query: 242 KLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGSANVGKSAFINALLKKMGERDP 301
KLNV+SVHL SS + G+ + I E+K RDVY++G+ANVGKSAF+ A+LK+M DP
Sbjct: 347 KLNVVSVHLVSSHTRDGMSAAVAVICSERKSRDVYVVGAANVGKSAFVRAMLKEMARTDP 406
Query: 302 AAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPGVHLHHRQAAVVHAEDLPALAP 361
AA KY P++SA+PGTTLG I + AF GG L+DTPG+HLHHR ++ +L L P
Sbjct: 407 AALGMGKYLPVESAMPGTTLGLIPLRAFSSGGVLFDTPGIHLHHRVLHMLSPAELKLLHP 466
Query: 362 QSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRIDLLKVLPETCLTFYGPKSLQV 421
+ RL + E T + G N + ++ P T L FYGP +L+V
Sbjct: 467 RRRLSAYVPPLPVEL-TEGDSDDVGANEV------VATNPPVRGPPSTALVFYGPTTLRV 519
Query: 422 YMVPTDKADEFYQKEL--GVTLTPPIGKQKAEGWKGLDRERLLEIKFEDTERPA--SDVA 477
+P D+ Q + G + T + + +G + + + ++ A +DV
Sbjct: 520 VGLPYIPPDKQLQVDYSDGSSSTNVLVCTDSVALRGGLQPKDVVVRANGAAGVAALADVV 579
Query: 478 ISGL-GWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVEVFVRNPMP 526
ISGL GW+SV ++ L + P+ VEV +R MP
Sbjct: 580 ISGLPGWVSV------------CAPKAKQDVRLRIWAPRGVEVMLRPAMP 617
>gi|108951298|gb|ABG25042.1| nitric oxide synthase, partial [Oryza sativa Japonica Group]
Length = 161
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 131/161 (81%), Positives = 147/161 (91%)
Query: 143 LLSHGHMITAVGGNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARI 202
LLSHGHMITAVGG+GGY GGKQFVSAD+LR+KLS+LR EKALI+KLVDIVDFNGSFLAR+
Sbjct: 1 LLSHGHMITAVGGHGGYPGGKQFVSADQLRDKLSYLRHEKALIIKLVDIVDFNGSFLARV 60
Query: 203 RDLAGANPIILVVTKVDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGV 262
RD AGANPIILV+TKVDLLP+ TD NC+GDWVVEA KKKLNVLSVHLTSSKSL G+ GV
Sbjct: 61 RDFAGANPIILVITKVDLLPRDTDLNCIGDWVVEAVVKKKLNVLSVHLTSSKSLVGVTGV 120
Query: 263 ASEIQKEKKGRDVYILGSANVGKSAFINALLKKMGERDPAA 303
SEIQ+EKKGRDVYILGSANVGKSAFI+A+L+ + +DP A
Sbjct: 121 ISEIQQEKKGRDVYILGSANVGKSAFISAMLRTIAYKDPVA 161
>gi|255075677|ref|XP_002501513.1| GTPase [Micromonas sp. RCC299]
gi|226516777|gb|ACO62771.1| GTPase [Micromonas sp. RCC299]
Length = 597
Score = 255 bits (652), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 160/406 (39%), Positives = 226/406 (55%), Gaps = 35/406 (8%)
Query: 37 VCKSTLSPETQFESD-----GAGAAAPTRGDRFLELQKAKEAAKVVVRDSKKKRKKKDKV 91
V ++ +P+T+ S G AAA +R R + + A + V D ++
Sbjct: 27 VARAPRNPDTRRRSAPAVKFGTAAAAGSRPSRVPDRRPASHDDLIRVDDDASDVRR---- 82
Query: 92 LKVNSAVASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQ-FKTVLCGRCRLLSHGHMI 150
L+ N CYGCG LQT +D GYVDPD YE K+ H Q F +LC RC LS+G M+
Sbjct: 83 LRGN-----CYGCGVALQTERADVSGYVDPDEYETKRVHKQLFGMMLCARCGDLSNGAMV 137
Query: 151 TAVGGNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANP 210
AV G GG + ++ +LRE+L+H+R +K L+VK+VD+ DF+GSFL R+RD+ GANP
Sbjct: 138 NAVAGQGGARMSQGLITPSQLREQLTHIRDKKVLVVKVVDVTDFHGSFLNRVRDVVGANP 197
Query: 211 IILVVTKVDLLPKGTDFNCVGDWV-VEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKE 269
I+LV+TK DLLP GTD + +W E +++L + + S + G+ + + E
Sbjct: 198 ILLVLTKCDLLPNGTDLALLKEWARREVEVRRRLTLAGIECVSGRKGDGVDKSVTAMFAE 257
Query: 270 KKGRDVYILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAF 329
+KGRDVY++GSANVGKS FI A LK M E A++ P SA+PGTTLG I + AF
Sbjct: 258 RKGRDVYVIGSANVGKSTFIRAALKSMRELGNFGVPAKRL-PTASAMPGTTLGIIPLRAF 316
Query: 330 LGGGKLYDTPGVHLHHRQAAVVHAEDLPAL---------APQSRLRGQSFAVISETETNN 380
G G LYDTPGV LHHR +++ ED+ P+ R + T+
Sbjct: 317 EGRGTLYDTPGVFLHHRMNSILPGEDIKRFKLGGSLVRYVPRRRCDDDASDASDRTD--- 373
Query: 381 EFKSHGLNGFTIFWGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPT 426
G ++ WG L+R+D+ P L FYGPK ++V +V T
Sbjct: 374 ------FTGLSLLWGPLIRVDVALATPAAGLVFYGPKGVRVTVVET 413
>gi|412985917|emb|CCO17117.1| predicted protein [Bathycoccus prasinos]
Length = 565
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 173/479 (36%), Positives = 241/479 (50%), Gaps = 59/479 (12%)
Query: 99 ASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGG 158
+CYGCG +Q A G+V YE KKK+ Q +LC RC LS+G MI AV G GG
Sbjct: 96 GACYGCGVKIQMVSPSAVGFVSELDYETKKKNKQLDLLLCLRCSNLSNGQMINAVVGQGG 155
Query: 159 YAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKV 218
++ +ELRE L +R +KAL+VK+VD+ DF+GSFL +IRDL G+NPI+LVVTK
Sbjct: 156 QKIETGLITPEELRETLKDIRGKKALVVKIVDLTDFHGSFLPKIRDLVGSNPILLVVTKC 215
Query: 219 DLLPKG---TDFNCVGDWVVEATTKKKLN-------VLSVHLTSSKS------------- 255
D++ KG + + ++V+E KKKL V + SS+S
Sbjct: 216 DVIGKGFAMENNESLIEYVIEECAKKKLTLAGDPIFVAARKPGSSRSNSSVGNDTTAPGT 275
Query: 256 -------LAGIVGVASEIQKEKKGRDVYILGSANVGKSAFINALLKKMGERDPAAAMAQK 308
L G+ +E++GRDVY++GSANVGKS F+ K + K
Sbjct: 276 RGIRGEDLNGMRAAVLTTIRERRGRDVYVVGSANVGKSTFVREFTKVLRTEMGNYFAPSK 335
Query: 309 YRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPGVHLHHRQAAVVHAEDLPAL--------- 359
P S++PGTTLG I I AF LYDTPGV LHHR ++++ E + +L
Sbjct: 336 RLPTASSMPGTTLGVIPIKAFEDKKSLYDTPGVFLHHRVNSLLNGEQMKSLKLGGDLKVY 395
Query: 360 -APQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRIDLLKVLPET------CLT 412
AP S+ G S + NN K L + W GLVR+D+L PET ++
Sbjct: 396 RAPVSQQDGSSSTSNVNSSNNNSEK---LKNVSFDWNGLVRLDILDA-PETDDLNTVNVS 451
Query: 413 FYGPKSLQVYMVPTD---KADEFYQKELGVTLTPPIGKQKAEGWKGLDRERLLEIKFEDT 469
FYGPK ++++ D K + K + P ++ + L R +EI +D
Sbjct: 452 FYGPKKMRIFKSRIDDMQKHADGGDKTCLFDESAPT-REFYQSLPSLRVSREVEISLDDY 510
Query: 470 ERPASDVAISGL-GWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVEVFVRNPMPV 527
+ D++ISGL GWI V VR N G + + V VEVFVR+ MP+
Sbjct: 511 K--GKDLSISGLGGWIRV--VRERNHTKYTNSPGAKGSITVRVWSLPGVEVFVRDVMPI 565
>gi|108951289|gb|ABG25038.1| nitric oxide synthase [Arabidopsis thaliana]
Length = 136
Score = 234 bits (597), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 116/136 (85%), Positives = 127/136 (93%)
Query: 102 YGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYAG 161
YGCGAPLQTS+ D+PG+VD TYELKKKHHQ +T++CGRC+LLSHGHMITAVGGNGGY G
Sbjct: 1 YGCGAPLQTSDVDSPGFVDLVTYELKKKHHQLRTMICGRCQLLSHGHMITAVGGNGGYPG 60
Query: 162 GKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDLL 221
GKQFVSADELREKLSHLR EKALIVKLVDIVDFNGSFLAR+RDL GANPIILV+TK+DLL
Sbjct: 61 GKQFVSADELREKLSHLRHEKALIVKLVDIVDFNGSFLARVRDLVGANPIILVITKIDLL 120
Query: 222 PKGTDFNCVGDWVVEA 237
PKGTD NC+GDWVVE
Sbjct: 121 PKGTDMNCIGDWVVEV 136
>gi|386714891|ref|YP_006181214.1| GTPase family protein [Halobacillus halophilus DSM 2266]
gi|384074447|emb|CCG45940.1| GTPase familiy protein [Halobacillus halophilus DSM 2266]
Length = 366
Score = 202 bits (513), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 138/426 (32%), Positives = 207/426 (48%), Gaps = 67/426 (15%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT+ + PGY P E + V+C RC L H + + V N
Sbjct: 6 CQGCGAEIQTTHPEQPGYAPPSALERED-------VICKRCFRLKHYNEVQDVPYN---- 54
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
AD+ E L + K LI++LVDI DFNGSF++ ++ L G NP+ILV K+D+
Sbjct: 55 -------ADDFLEMLHQISDTKGLIIQLVDIFDFNGSFISGLKRLTGNNPVILVGNKMDV 107
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + V W+ + ++ L V V L S++ GI ++ + +KG DVY++G+
Sbjct: 108 LPKSVNHEKVKHWLKRSAKEQGLIVEDVFLISAEKNQGITELSKAMDHYRKGGDVYVVGT 167
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS FIN L+ GE+D S PGTTLG I I L+DTP
Sbjct: 168 TNVGKSTFINTLISNTSGEKDAITT---------SYFPGTTLGFIDI-PLDENSSLFDTP 217
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
GV H+ A V +DL + P+ ++ + + + NE + T+++GGL R
Sbjct: 218 GVIQRHQMAHYVSEQDLKVITPRREVKPKIYQL-------NEAQ-------TLYFGGLAR 263
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
+D + T Y + ++ +KAD+ YQ LG L PP + E L ++
Sbjct: 264 LD-FESGSRTSFVCYFSNEINIHRTKLEKADDLYQNHLGELLVPP-DSRTMEKLPPL-KK 320
Query: 460 RLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVEV 519
+ IK + T D+ SGLGWI+V G +++ VHVP+ V+V
Sbjct: 321 QTFRIKEDKT-----DIVFSGLGWITV----------------PEGHINVTVHVPEGVKV 359
Query: 520 FVRNPM 525
+R +
Sbjct: 360 SLRESL 365
>gi|317128279|ref|YP_004094561.1| ribosome biogenesis GTPase YqeH [Bacillus cellulosilyticus DSM
2522]
gi|315473227|gb|ADU29830.1| ribosome biogenesis GTPase YqeH [Bacillus cellulosilyticus DSM
2522]
Length = 372
Score = 198 bits (504), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 132/407 (32%), Positives = 209/407 (51%), Gaps = 56/407 (13%)
Query: 88 KDKVLKVNSAVASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHG 147
KDK++ C GCG +QT E + GY K + ++C RC L H
Sbjct: 6 KDKII--------CSGCGISIQTEEPNNLGYA-------PKSALTREVIICQRCFKLKHY 50
Query: 148 HMITAVGGNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAG 207
+ + V ++ D+ + L+ L ++ ALIVK+VDI DF+GS+L + G
Sbjct: 51 NEVQDVP-----------LTDDDFLKILNELGKKNALIVKVVDIFDFDGSWLQGLPRFVG 99
Query: 208 ANPIILVVTKVDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQ 267
NPI+LV KVDLLPK N + +W+ A+ L +HL S+++ G++ AS I
Sbjct: 100 NNPILLVGNKVDLLPKSVKRNKLVNWMKWASKNYGLKPADIHLMSAETGEGVMETASLID 159
Query: 268 KEKKGRDVYILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQID 327
K ++GRDVY++GS NVGKS FIN LLK+ G D ++ S +PGTTL I I
Sbjct: 160 KWREGRDVYVVGSTNVGKSTFINRLLKEFGADD-------EFLITTSNIPGTTLDMIDI- 211
Query: 328 AFLGGGKLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGL 387
G L+DTPG+ HH+ A ++ +L ++P+ ++ F + +
Sbjct: 212 PLDDGASLFDTPGIINHHQMAHRLNKNELKVISPRKEVKPTVFQLNDQQ----------- 260
Query: 388 NGFTIFWGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGK 447
T+F+GGL R+D L+ + + ++ L ++ +KAD+ ++ LG LTPP K
Sbjct: 261 ---TLFFGGLARLDFLQGEGRSFVCYFS-NELNIHRTKLEKADQLFENHLGELLTPPF-K 315
Query: 448 QKAEGWKGLDRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIR 494
+ + + L++ +++ TE D+ ISGLGW++V IR
Sbjct: 316 ENVDSFP-----ELVKKEWKLTEE-KQDIVISGLGWVTVHGKGAQIR 356
>gi|172056802|ref|YP_001813262.1| GTP-binding protein YqeH [Exiguobacterium sibiricum 255-15]
gi|171989323|gb|ACB60245.1| Nitric-oxide synthase [Exiguobacterium sibiricum 255-15]
Length = 374
Score = 195 bits (496), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 127/388 (32%), Positives = 191/388 (49%), Gaps = 47/388 (12%)
Query: 100 SCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGY 159
+C GCG +QT + APGY K + V+C RC L H + I V
Sbjct: 11 NCAGCGVAIQTEDPKAPGYA-------PKSALDREMVICQRCFKLKHYNQIQDVA----- 58
Query: 160 AGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVD 219
++ D+ + L + ++ AL+VK+VDI DFNGS+L + G N ++LV K D
Sbjct: 59 ------LTDDDFVKILDGIGQKDALVVKIVDIFDFNGSWLPGLHRFVGKNDVLLVGNKAD 112
Query: 220 LLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILG 279
LLPK + N + +W+ + + + L + VHL S+K G+ +A +I +KGRDVY++G
Sbjct: 113 LLPKSLNPNRLMNWMRQTSKELGLRPVDVHLISAKKGHGVDELAEKIDYYRKGRDVYVVG 172
Query: 280 SANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS IN ++K+ GE + A + PGTTL I I LYDTP
Sbjct: 173 CTNVGKSTLINQVIKRFGEEEEAVITVSHF-------PGTTLDLIDI-PLDDNCNLYDTP 224
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ HH+ A V A DL + P+ ++ Q F + + T+F+GGL R
Sbjct: 225 GIINHHQMAHYVDARDLKLITPKKEIKPQVFQIHPQQ--------------TLFFGGLAR 270
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
+D ++ + Y L+V+ DKAD+ Y G L+PP ++ E L R
Sbjct: 271 LDYMEG-NKRSFVIYMSNDLKVHRTKLDKADDLYANHNGELLSPP-NEKTLEMLPPLVRH 328
Query: 460 RLLEIKFEDTERPASDVAISGLGWISVE 487
E D + +D+ SGLGW++V
Sbjct: 329 ---EFSLRDNMK--TDIVFSGLGWVAVH 351
>gi|407476612|ref|YP_006790489.1| ribosome biogenesis protein GTPase YqeH [Exiguobacterium
antarcticum B7]
gi|407060691|gb|AFS69881.1| Ribosome biogenesis protein GTPase YqeH [Exiguobacterium
antarcticum B7]
Length = 368
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 126/388 (32%), Positives = 190/388 (48%), Gaps = 47/388 (12%)
Query: 100 SCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGY 159
+C GCG +QT + APGY K + V+C RC L H + I V
Sbjct: 5 NCAGCGVAIQTEDPKAPGYA-------PKSALDREMVICQRCFKLKHYNQIQDVA----- 52
Query: 160 AGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVD 219
++ D+ + L + ++ AL+VK+VDI DFNGS+L + G N ++LV K D
Sbjct: 53 ------LTDDDFVKILDGIGQKDALVVKIVDIFDFNGSWLPGLHRFVGKNDVLLVGNKAD 106
Query: 220 LLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILG 279
LLPK + N + +W+ + + + L + VHL S+K G+ +A +I +KGRDVY++G
Sbjct: 107 LLPKSLNPNRLMNWMRQTSKELGLRPVDVHLISAKKGHGVDELAEKIDYYRKGRDVYVVG 166
Query: 280 SANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS IN ++K+ GE + A + PGTTL I I LYDTP
Sbjct: 167 CTNVGKSTLINQVIKRFGEEEEAVITVSHF-------PGTTLDLIDI-PLDDNCNLYDTP 218
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ HH+ A V DL + P+ ++ Q F + + T+F+GGL R
Sbjct: 219 GIINHHQMAHYVDGRDLKLITPKKEIKPQVFQIHPQQ--------------TLFFGGLAR 264
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
+D ++ + Y L+V+ DKAD+ Y G L+PP ++ E L R
Sbjct: 265 LDYMEG-NKRSFVIYMSNDLKVHRTKLDKADDLYANHNGELLSPP-NEKTLEMLPPLVRH 322
Query: 460 RLLEIKFEDTERPASDVAISGLGWISVE 487
E D + +D+ SGLGW++V
Sbjct: 323 ---EFSLRDNMK--TDIVFSGLGWVAVH 345
>gi|288555654|ref|YP_003427589.1| GTPase YqeH [Bacillus pseudofirmus OF4]
gi|288546814|gb|ADC50697.1| GTP-binding protein YqeH putative GTPase [Bacillus pseudofirmus
OF4]
Length = 370
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 127/387 (32%), Positives = 194/387 (50%), Gaps = 48/387 (12%)
Query: 100 SCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGY 159
+C GCG +QT + + GY E + ++C RC L H + + V
Sbjct: 7 TCAGCGVQIQTEDKNETGYAPKSALERE-------VIICQRCFRLKHYNEVQDVS----- 54
Query: 160 AGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVD 219
++ D+ + L+ L +LIVK+VDI DFNGS+L + G N ++LV KVD
Sbjct: 55 ------LTDDDFLKLLNTLGHTDSLIVKVVDIFDFNGSWLPGLHRFVGNNDVLLVGNKVD 108
Query: 220 LLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILG 279
LLPK N + +W+ ++ + L + V L S++ G++ +ASEI + + GRDVY++G
Sbjct: 109 LLPKSLKRNRLINWMKKSAKENGLKPVDVLLMSAEKGEGVLDIASEIDRLRDGRDVYVVG 168
Query: 280 SANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS FIN ++K+ G + PGTTL I I G LYDTP
Sbjct: 169 CTNVGKSTFINRIIKEFGGDTEQLITTSHF-------PGTTLDMIDI-PLDDGSALYDTP 220
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ HH+ A V ++L + P+ ++ F + NE G T+++GG+ R
Sbjct: 221 GIINHHQMAHFVDKKELKQITPKKEIKPMVFQL-------NE-------GQTLYFGGMAR 266
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + T + L ++ +KA+E YQ LG LTPP GK+ + L +
Sbjct: 267 FDFV-AGERSSFTCFTSNDLNIHRTKREKAEELYQNHLGELLTPP-GKESMVDFPPLVKH 324
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
E +DT+ SD+ ISGLGWI+V
Sbjct: 325 ---EFTIKDTK---SDIVISGLGWITV 345
>gi|392957245|ref|ZP_10322769.1| GTPase YqeH [Bacillus macauensis ZFHKF-1]
gi|391876652|gb|EIT85248.1| GTPase YqeH [Bacillus macauensis ZFHKF-1]
Length = 366
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 132/387 (34%), Positives = 193/387 (49%), Gaps = 50/387 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG P+QT + + GY P + LKK+ V+C RC L H + I V
Sbjct: 7 CIGCGVPIQTEDKEGLGYAPPSS--LKKE-----AVICQRCFRLKHYNEIQDVN------ 53
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ R+ LS + ++L+VK+VDI DFNGS+L I G N ++LV KVDL
Sbjct: 54 -----LTDDDYRKILSSIGDTQSLVVKIVDIFDFNGSWLPGIHRYIGKNKLMLVGNKVDL 108
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + N + W+ + + VHL SS G+ VA +I + ++G+DVY++G
Sbjct: 109 LPKSVNKNRLKQWMATMAKEYGVKAEEVHLVSSAKGTGLQEVAEQIDELREGKDVYVVGC 168
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS FIN L+K++G Q+ S PGTTL I I L+DTPG
Sbjct: 169 TNVGKSTFINGLIKQLGTE-------QQDIITTSYFPGTTLNLIDI-PLDEETALFDTPG 220
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ HH+ A V ++L + P+ ++ + + E ++F GGL R
Sbjct: 221 IINHHQMAHFVSKDELKIIMPKKEIKPLVYQLNEEQ--------------SLFLGGLARF 266
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D +K + L ++ ++AD+ Y+K LG LTPP Q E L R
Sbjct: 267 DYIKG-GRRSFVCHISNDLNIHRTKLERADDLYEKHLGELLTPP---QDREKLPPLKRYE 322
Query: 461 LLEIKFEDTERPASDVAISGLGWISVE 487
+ IK +DT D+ SGLGWISV+
Sbjct: 323 FM-IKEKDT-----DIVFSGLGWISVK 343
>gi|295706670|ref|YP_003599745.1| GTP-binding protein [Bacillus megaterium DSM 319]
gi|294804329|gb|ADF41395.1| GTP-binding protein [Bacillus megaterium DSM 319]
Length = 368
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 138/427 (32%), Positives = 205/427 (48%), Gaps = 67/427 (15%)
Query: 100 SCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGY 159
C GCG +QT D GY E + ++C RC L H + + V
Sbjct: 7 QCVGCGVEIQTERPDELGYAPKSALEKE-------VIICQRCFRLKHYNEVQDVS----- 54
Query: 160 AGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVD 219
++ D+ + L+ + + L+VK+VDI DFNGS+L + G N ++LV K D
Sbjct: 55 ------LTDDDFLKILNGIGQTDGLVVKVVDIFDFNGSWLPGLHRFVGNNKVLLVGNKAD 108
Query: 220 LLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILG 279
LLPK N + W+ + L + V L S++ GI +A I+ ++G+DVY++G
Sbjct: 109 LLPKSIKKNKLIHWMKREAKELGLKSVDVFLMSAQKGQGIREIAEAIEHYREGKDVYVVG 168
Query: 280 SANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDT 338
NVGKS FINA++K++ GE+D S PGTTL I I G LYDT
Sbjct: 169 CTNVGKSTFINAIIKEVTGEKDIITT---------SQYPGTTLDMIDI-PLDNGASLYDT 218
Query: 339 PGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLV 398
PG+ HH+ A V DL ++P+ ++ + + + NE G T+++GGL
Sbjct: 219 PGIINHHQMAHYVDKRDLKLISPKKEIKPKVYQL-------NE-------GQTLYFGGLA 264
Query: 399 RIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDR 458
R+D ++ LT Y L ++ +KADE Y+K+ G L PP +Q E + +
Sbjct: 265 RLDYVQG-GRKSLTCYVSNDLHIHRTKLEKADELYEKQAGELLQPPRPEQMDEFPELVAH 323
Query: 459 ERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVE 518
E IK E T D+ SGLGW++V ES S + H PK V
Sbjct: 324 E--FTIKNEKT-----DIVFSGLGWVTVN-------------ESGS---KVVAHAPKGVG 360
Query: 519 VFVRNPM 525
VFVR+ +
Sbjct: 361 VFVRDSL 367
>gi|294501323|ref|YP_003565023.1| GTP-binding protein [Bacillus megaterium QM B1551]
gi|294351260|gb|ADE71589.1| GTP-binding protein [Bacillus megaterium QM B1551]
Length = 368
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 138/427 (32%), Positives = 205/427 (48%), Gaps = 67/427 (15%)
Query: 100 SCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGY 159
C GCG +QT D GY E + ++C RC L H + + V
Sbjct: 7 QCVGCGVEIQTERPDELGYAPKSALEKE-------AIICQRCFRLKHYNEVQDVS----- 54
Query: 160 AGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVD 219
++ D+ + L+ + + L+VK+VDI DFNGS+L + G N ++LV K D
Sbjct: 55 ------LTDDDFLKILNGIGQTDGLVVKVVDIFDFNGSWLPGLHRFVGNNKVLLVGNKAD 108
Query: 220 LLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILG 279
LLPK N + W+ + L + V L S++ GI +A I+ ++G+DVY++G
Sbjct: 109 LLPKSIKKNKLIHWMKREAKELGLKSVDVFLMSAQKGQGIREIAEAIEHYREGKDVYVVG 168
Query: 280 SANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDT 338
NVGKS FINA++K++ GE+D S PGTTL I I G LYDT
Sbjct: 169 CTNVGKSTFINAIIKEVTGEKDIITT---------SQYPGTTLDMIDI-PLDNGASLYDT 218
Query: 339 PGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLV 398
PG+ HH+ A V DL ++P+ ++ + + + NE G T+++GGL
Sbjct: 219 PGIINHHQMAHYVDKRDLKLISPKKEIKPKVYQL-------NE-------GQTLYFGGLA 264
Query: 399 RIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDR 458
R+D ++ LT Y L ++ +KADE Y+K+ G L PP +Q E + +
Sbjct: 265 RLDYVQG-GRKSLTCYVSNDLHIHRTKLEKADELYEKQAGELLQPPRPEQMDEFPELVAH 323
Query: 459 ERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVE 518
E IK E T D+ SGLGW++V ES S + H PK V
Sbjct: 324 E--FTIKNEKT-----DIVFSGLGWVTVN-------------ESGS---KVVAHAPKGVG 360
Query: 519 VFVRNPM 525
VFVR+ +
Sbjct: 361 VFVRDSL 367
>gi|384044834|ref|YP_005492851.1| GTPase family protein [Bacillus megaterium WSH-002]
gi|345442525|gb|AEN87542.1| GTPase family protein [Bacillus megaterium WSH-002]
Length = 368
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 137/427 (32%), Positives = 206/427 (48%), Gaps = 67/427 (15%)
Query: 100 SCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGY 159
C GCG +QT + GY E + ++C RC L H + + V
Sbjct: 7 QCVGCGVEIQTERPNELGYAPKSALEKE-------AIICQRCFRLKHYNEVQDVS----- 54
Query: 160 AGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVD 219
++ D+ + L+ + + L+VK+VDI DFNGS+L + G N ++LV K D
Sbjct: 55 ------LTDDDFLKILNGIGQTDGLVVKVVDIFDFNGSWLPGLHRFVGNNKVLLVGNKAD 108
Query: 220 LLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILG 279
LLPK N + W+ + L + V L S++ GI +A I+ ++G+DVY++G
Sbjct: 109 LLPKSIKKNKLIHWMKREAKELGLKSVDVFLMSAQKGQGIREIAEAIEHYREGKDVYVVG 168
Query: 280 SANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDT 338
NVGKS FINA++K++ GE+D S PGTTL I I G LYDT
Sbjct: 169 CTNVGKSTFINAIIKEVTGEKDIITT---------SQYPGTTLDMIDI-PLDNGASLYDT 218
Query: 339 PGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLV 398
PG+ HH+ A V DL ++P+ ++ + + + NE G T+++GGL
Sbjct: 219 PGIINHHQMAHYVDKRDLKLISPKKEIKPKVYQL-------NE-------GQTLYFGGLA 264
Query: 399 RIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDR 458
R+D ++ LT Y L ++ +KADE Y+K+ G L PP +Q +E + +
Sbjct: 265 RLDYVQG-GRKSLTCYVSNDLHIHRTKLEKADELYEKQAGELLQPPRPEQMSEFPELVAH 323
Query: 459 ERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVE 518
E IK E T D+ SGLGW++V ES S + H PK V
Sbjct: 324 E--FTIKNEKT-----DIVFSGLGWVTVN-------------ESGS---KVVAHAPKGVG 360
Query: 519 VFVRNPM 525
VFVR+ +
Sbjct: 361 VFVRDSL 367
>gi|15613886|ref|NP_242189.1| GTP-binding protein YqeH [Bacillus halodurans C-125]
gi|10173939|dbj|BAB05042.1| BH1323 [Bacillus halodurans C-125]
Length = 367
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 131/388 (33%), Positives = 188/388 (48%), Gaps = 54/388 (13%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG +QT + GY P LK+ ++C RC + H + + V
Sbjct: 8 CAGCGVKIQTESKEMLGYTPPSA--LKRD-----VIICQRCFRMQHYNEVQDVS------ 54
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ + L + KALIVKLVDI DFNGS+L + G N ++L+ KVDL
Sbjct: 55 -----LTDDDFLKILHTIGERKALIVKLVDIFDFNGSWLPGLHRFVGGNDVLLIGNKVDL 109
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + N + +W+ ++ L + V L S + G+ VAS I + +KG+DVY++G+
Sbjct: 110 LPKSVNRNRMINWMRKSAKDLGLKPIDVALISGEKGIGVKEVASLIDRLRKGKDVYVVGA 169
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGK-LYDTP 339
NVGKS FIN +++ G + + PGTTL ID L GK LYDTP
Sbjct: 170 TNVGKSTFINKMIQIFGGDEEQMITTSHF-------PGTTLD--MIDIPLDDGKTLYDTP 220
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ HH+ A V +L + P+ ++ + F + E T+F+GGL R
Sbjct: 221 GIINHHQMAHYVAKNELKLITPKKEIKPKVFQLNEEQ--------------TLFFGGLAR 266
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D +K T Y L ++ +KADE Y+K LG LTPP Q
Sbjct: 267 FDFVKG-ERTSFVCYVSNDLFIHRTKLEKADELYEKRLGDVLTPPEDPQHLPSL------ 319
Query: 460 RLLEIKFEDTERPAS-DVAISGLGWISV 486
+K E T R DV ISGLGW++V
Sbjct: 320 ----VKHEFTIRVQKVDVVISGLGWVTV 343
>gi|440803475|gb|ELR24376.1| ribosome biogenesis GTPase YqeH, putative [Acanthamoeba castellanii
str. Neff]
Length = 578
Score = 188 bits (477), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 151/449 (33%), Positives = 221/449 (49%), Gaps = 70/449 (15%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA LQ+ + + GY P LK++ V C RC L H ++T +
Sbjct: 11 CPGCGATLQSDDPHSIGYKPPQV--LKQEERGLAPV-CQRCHSLRHHGIVTPLK------ 61
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
V +E++E L + + L+VK+VDI DF+GSF+ R + G NP++LV K+DL
Sbjct: 62 -----VPYEEVKEHLKLISDQSCLVVKIVDIFDFSGSFINDFRGITGNNPVVLVGNKLDL 116
Query: 221 LPKGTDFNCVGDWVVEATTKKKL-NVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILG 279
LP G + W+ T+ L NV SVHL S+KS G+ ++ +I++ +K RDVY++G
Sbjct: 117 LPVGAKPERIQIWLKRLATEMGLKNVRSVHLISAKSGEGVHSLSRKIEQLRKERDVYVVG 176
Query: 280 SANVGKSAFINALLK---KMGERDPAAAMAQ--KYRPI--QSAVPGTTLGPIQIDAFLGG 332
NVGKS IN L+ K + Q K R + S VPGTTL I LGG
Sbjct: 177 CTNVGKSTLINRLISINTKGTYNSLTVHIVQGPKKRNLITTSIVPGTTLNLISFP--LGG 234
Query: 333 GK---------LYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFK 383
K LYDTPGV H+ A +++ E+L P+ R++ ++ ++
Sbjct: 235 KKAFKMGKRAFLYDTPGVINKHQMANLLNMEELSITLPKRRIQPVTYRLVP--------- 285
Query: 384 SHGLNGFTIFWGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTP 443
G +F+GGL R+D + LT + K L+V+ KAD+ K G L P
Sbjct: 286 -----GKALFFGGLGRLDYVDGPGPLYLTLFLSKELKVHPTSIAKADDVMSKHAGTLLVP 340
Query: 444 PIGKQKAEGWKGLDRERLLEIKFE-DTERPA-----SDVAISGLGWIS-VEPVRRSIRNS 496
P+G+++A K L +I E D ER +D+ SGLGW S V P +
Sbjct: 341 PLGEERA---KQLPEFIAKDIHIEADEERGGLKKSFADIVFSGLGWTSLVTPT----FDR 393
Query: 497 DINLESTSGELHLAVHVPKPVEVFVRNPM 525
DI+L S S P+ V +F+R P+
Sbjct: 394 DIHLRSLS---------PEGVGIFLREPL 413
>gi|311069170|ref|YP_003974093.1| GTP-binding protein YqeH [Bacillus atrophaeus 1942]
gi|419820180|ref|ZP_14343793.1| GTPase YqeH [Bacillus atrophaeus C89]
gi|310869687|gb|ADP33162.1| GTP-binding protein YqeH [Bacillus atrophaeus 1942]
gi|388475692|gb|EIM12402.1| GTPase YqeH [Bacillus atrophaeus C89]
Length = 366
Score = 187 bits (476), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 130/425 (30%), Positives = 196/425 (46%), Gaps = 65/425 (15%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG +QT +++ GY P + L K++ V+C RC L + + I V
Sbjct: 6 CIGCGVTIQTEDNNGLGYAPPAS--LTKEN-----VICQRCFRLKNYNEIQDVS------ 52
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ L + +LIVK+VDI DFNGS++ + L G NPI+LV K D+
Sbjct: 53 -----LTDDDFLNILHGIGETDSLIVKIVDIFDFNGSWINGLNRLVGGNPILLVGNKADI 107
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W+ + L L V L S+ GI V I+ ++GRDVY++G
Sbjct: 108 LPKSLKRERLIQWMKREAKEYGLKPLDVFLVSASRGQGIKEVIDAIEHYRQGRDVYVVGC 167
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS FIN ++K++ + +Q PGTTL I+I G LYDTPG
Sbjct: 168 TNVGKSTFINRIIKEVSGEENIITTSQ--------FPGTTLDAIEI-PLDDGSALYDTPG 218
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ H+ A V+ DL L P+ L+ ++F + + T+++GGL R
Sbjct: 219 IINRHQMAHYVNKRDLKVLTPKKELKPRTFQLNDQQ--------------TLYFGGLARF 264
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D + + Y P L ++ + AD Y+K G LTPP GK + + L
Sbjct: 265 DYVSG-ARSAFVCYMPNDLLIHRTKLENADALYEKHAGELLTPP-GKDDMDEFPELTAHT 322
Query: 461 LLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVEVF 520
+ P +D+ SGLGW++V+ + I + PK V VF
Sbjct: 323 FT------IKEPKTDIVFSGLGWVTVQEAEKKI----------------TAYAPKGVHVF 360
Query: 521 VRNPM 525
VR +
Sbjct: 361 VRRSL 365
>gi|297584672|ref|YP_003700452.1| ribosome biogenesis GTPase YqeH [Bacillus selenitireducens MLS10]
gi|297143129|gb|ADH99886.1| ribosome biogenesis GTPase YqeH [Bacillus selenitireducens MLS10]
Length = 373
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 126/387 (32%), Positives = 187/387 (48%), Gaps = 48/387 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG +QT +A GY P E + V+C RC L H + + V
Sbjct: 12 CAGCGVTIQTEHKEATGYTPPSALERE-------VVICQRCYRLKHYNEVQDVS------ 58
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ L+ L L+VK+VDI DF+GS+L ++ G NP++L+ KVDL
Sbjct: 59 -----LTDDDFLRILNQLGARDGLVVKVVDIFDFDGSWLNGLQRYVGENPVLLIGNKVDL 113
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK V W+ A +K L + VHL S+++ G++ A I++ + G+DV+I GS
Sbjct: 114 LPKSVKRPKVIHWMKRAAKEKGLKPVDVHLMSAETGEGVLEAADLIEEYRNGKDVFIAGS 173
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
N GKS FIN LLK+ G D S +PGTTL I + G LYDTPG
Sbjct: 174 TNTGKSTFINRLLKEYGAADELMITT-------SNIPGTTLDMIDV-PLDDGSSLYDTPG 225
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ H+ A V L + P+ ++ + F + E +IF+ GL RI
Sbjct: 226 IINTHQMAHRVDRSTLKTILPRKEVKPKIFQLSEEQ--------------SIFFAGLGRI 271
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D LK ++ + F L ++ +KAD Y+ +LG L+PP G + LD
Sbjct: 272 DFLKGDRQSFIVFMS-NDLYIHRTKLEKADRLYETQLGDQLSPPSGSE-------LDHFP 323
Query: 461 LLEIKFEDTERPASDVAISGLGWISVE 487
L+ K + D+ SGLGW++V+
Sbjct: 324 PLKRKEWKVDAGKFDIVYSGLGWVTVD 350
>gi|334881686|emb|CCB82584.1| GTPase [Lactobacillus pentosus MP-10]
gi|339636928|emb|CCC15753.1| GTPase [Lactobacillus pentosus IG1]
Length = 378
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 126/386 (32%), Positives = 193/386 (50%), Gaps = 44/386 (11%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT++ A GY P++ K + + C RC L H + I VG
Sbjct: 11 CIGCGAAIQTTDPKAAGYT-PNSALQKSLASDAQDLYCQRCFRLRHYNEIVPVG------ 63
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ R L+ +R AL+V +VDI D NGS + ++ G NP++LV K D+
Sbjct: 64 -----LTDDDFRRLLATIRDANALVVYVVDIFDLNGSIIPGLQRFVGDNPVLLVGNKEDV 118
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LP+ + +W+ + + + + V LTS+K I + + I+K ++GRDVY++G
Sbjct: 119 LPRQLRRTKLREWMNQQVRAQGIKPVDVALTSAKKGHAIDDLLAMIEKYRRGRDVYVVGV 178
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS IN ++ A K S PGTTL I+I G K+ DTPG
Sbjct: 179 TNVGKSTLINRII--------ANNTGLKDLITTSRFPGTTLDKIEI-PLDDGHKMVDTPG 229
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ + A V+ +DL ++PQ +R + F + NG T+F GG+ R+
Sbjct: 230 IIHPEQMAHVLSGDDLKLVSPQKEIRPKGFQL--------------GNGQTLFLGGVARL 275
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D++ L T T Y +L ++ T+ AD FY K +G +TPP G A D
Sbjct: 276 DIVDTLKPTG-TVYVDNNLTLHRTRTENADNFYTKHVGELITPPTGAAVA------DFPP 328
Query: 461 LLEIKFEDTERPASDVAISGLGWISV 486
L+ +F+ TE SD+ GLGW++V
Sbjct: 329 LVRHEFKVTE--TSDIVFEGLGWVTV 352
>gi|194017759|ref|ZP_03056369.1| ribosome biogenesis GTPase YqeH [Bacillus pumilus ATCC 7061]
gi|194010659|gb|EDW20231.1| ribosome biogenesis GTPase YqeH [Bacillus pumilus ATCC 7061]
Length = 366
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 133/425 (31%), Positives = 201/425 (47%), Gaps = 65/425 (15%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG +QT + D GY P LK+ V+C RC L + + I V
Sbjct: 6 CIGCGVAIQTEDKDQLGYA-PAASLLKED------VICQRCFRLKNYNEIQDVS------ 52
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ L + +LIVK+VDI DFNGS++ + + G NPI+LV KVD+
Sbjct: 53 -----LTEDDFLNILHSIGETDSLIVKVVDIFDFNGSWINGLSRIVGGNPILLVGNKVDI 107
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + + W+ + LN + V L S+ G+ V I ++GR+VY++G
Sbjct: 108 LPKSVKKDRLIHWMKREAKENGLNPIDVFLISASRGQGVPEVMEAIDHYREGRNVYVVGC 167
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS FIN ++K++ ++ +Q PGTTL I+I G L+DTPG
Sbjct: 168 TNVGKSTFINRIIKEVSGKENVITTSQ--------YPGTTLDAIEI-PLDDGSALFDTPG 218
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ H+ A V DL L P+ L+ ++F + NE + T+++GGL R
Sbjct: 219 IINRHQMAHYVSKNDLKILTPKKELKPRTFQL-------NEAQ-------TLYFGGLARF 264
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D +K T Y P L ++ + AD+ Y+K G L+PP EG + D
Sbjct: 265 DYVKG-GRTSFVCYMPNELNIHRTKLENADDLYEKHAGELLSPP----SKEGME--DFPP 317
Query: 461 LLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVEVF 520
L+ F ++P D+ SGLGWI+ + I+ V+ PK V VF
Sbjct: 318 LVPHTFT-IDQPKMDIVFSGLGWITANDAGKQIK----------------VYAPKGVHVF 360
Query: 521 VRNPM 525
+R +
Sbjct: 361 MRRSL 365
>gi|389571867|ref|ZP_10161955.1| ribosome biogenesis GTPase YqeH [Bacillus sp. M 2-6]
gi|388428353|gb|EIL86150.1| ribosome biogenesis GTPase YqeH [Bacillus sp. M 2-6]
Length = 366
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 133/425 (31%), Positives = 200/425 (47%), Gaps = 65/425 (15%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG +QT + D GY P LK+ V+C RC L + + I V
Sbjct: 6 CIGCGVAIQTEDKDQLGYA-PAASLLKED------VICQRCFRLKNYNEIQDVS------ 52
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ L + +LIVK+VDI DFNGS++ + + G NPI+LV KVD+
Sbjct: 53 -----LTEDDFLNILHSIGETDSLIVKVVDIFDFNGSWINGLSRIVGGNPILLVGNKVDI 107
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + + W+ + LN + V L S+ G+ V I ++GR+VY++G
Sbjct: 108 LPKSVKKDRLVQWMKREAKENGLNPIDVFLISASRGQGVPEVMEAIDHYREGRNVYVVGC 167
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS FIN ++K++ + +Q PGTTL I+I G L+DTPG
Sbjct: 168 TNVGKSTFINRIIKEVSGEENVITTSQ--------YPGTTLDAIEI-PLDDGSALFDTPG 218
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ H+ A V DL L P+ L+ ++F + NE + T+++GGL R
Sbjct: 219 IINRHQMAHYVGKNDLKILTPKKELKPRTFQL-------NEAQ-------TLYFGGLARF 264
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D +K T Y P L ++ + ADE Y+K G L+PP EG + D
Sbjct: 265 DYVKG-GRTSFVCYMPNELNIHRTKLENADELYEKHAGELLSPP----SKEGME--DFPP 317
Query: 461 LLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVEVF 520
L+ F ++P D+ SGLGW++ + I+ V+ PK V VF
Sbjct: 318 LVPHTFT-IDQPKMDIVFSGLGWVTANDAGKQIK----------------VYAPKGVHVF 360
Query: 521 VRNPM 525
+R +
Sbjct: 361 MRRSL 365
>gi|70726319|ref|YP_253233.1| GTP-binding protein YqeH [Staphylococcus haemolyticus JCSC1435]
gi|68447043|dbj|BAE04627.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435]
Length = 366
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 134/429 (31%), Positives = 207/429 (48%), Gaps = 74/429 (17%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFK-TVLCGRCRLLSHGHMITAVGGNGGY 159
C GCGAPLQ+ + APGYV +H+ F+ V+C RC L + + I VG
Sbjct: 7 CIGCGAPLQSEDKSAPGYV--------PEHNLFREDVICQRCFRLKNYNEIQDVG----- 53
Query: 160 AGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVD 219
+ +++ L+ L K +IV +VDI DF GSF+ ++ + G IIL K+D
Sbjct: 54 ------MDSEDFLNLLNELSDRKGIIVNVVDIFDFEGSFINALKRIVGNKKIILAANKLD 107
Query: 220 LLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILG 279
LLPK + V DW+ + K L+ V L S++ GI + + I + + +DVYI+G
Sbjct: 108 LLPKQINKRRVKDWLKKTARKYGLDADDVILISAQKGWGIDDLLTSIDQNRNKQDVYIVG 167
Query: 280 SANVGKSAFINALLKK-MGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDT 338
+ NVGKS IN L+++ +GE+D S PGTTL I I +YDT
Sbjct: 168 TTNVGKSTLINKLIEQSVGEKDVVTT---------SRFPGTTLDLIDI-PLDEKTFMYDT 217
Query: 339 PGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLV 398
PG+ H+ V ++L + P++ ++ + F + NE G T+F+GGL
Sbjct: 218 PGIIQSHQMTHYVSEKELKTIVPKNEIKQRVFQL-------NE-------GQTLFFGGLS 263
Query: 399 RIDLLK--VLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGL 456
RID + P C Y L ++ T+KA++ ++ ++G LTPP
Sbjct: 264 RIDYVSGGKRPLVC---YFSNDLNIHRTKTEKANDLWRNQIGNVLTPP------NNPDHF 314
Query: 457 DRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKP 516
D ++ E T + D+ ISGLG+I++E + I V VPK
Sbjct: 315 DMSDTKAVRLE-TGKEKKDIMISGLGFITIEAGAKVI-----------------VRVPKN 356
Query: 517 VEVFVRNPM 525
V+V +RN +
Sbjct: 357 VDVILRNSI 365
>gi|334137654|ref|ZP_08511083.1| ribosome biogenesis GTPase YqeH [Paenibacillus sp. HGF7]
gi|333604818|gb|EGL16203.1| ribosome biogenesis GTPase YqeH [Paenibacillus sp. HGF7]
Length = 371
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 133/428 (31%), Positives = 204/428 (47%), Gaps = 63/428 (14%)
Query: 98 VASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNG 157
V C GCG LQ + A GY E + V+C RC + + + +++ N
Sbjct: 6 VIHCGGCGVKLQLEDPHALGYTPAQALEKE-------PVICQRCFRIKNYNEASSITLN- 57
Query: 158 GYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTK 217
D+ + L H+ ++AL++ +VDI DF GS ++ + G NPIILVV K
Sbjct: 58 ----------QDDFLKLLGHVGHKEALVINIVDIFDFEGSLISGLARFVGGNPIILVVNK 107
Query: 218 VDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYI 277
+DLLPK T++N + +WV + ++ L V+ V L S+K G V + + + G+DVY+
Sbjct: 108 IDLLPKVTNWNRIVNWVRKQAKEQGLKVVEVVLCSAKKNMGFDRVLQAVDEHRNGKDVYV 167
Query: 278 LGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYD 337
+G+ NVGKS IN L+ + D +Q PGTTL ++I G + D
Sbjct: 168 VGATNVGKSTLINRLISDYSDLDSELTTSQ--------YPGTTLDMVEI-PLDDGHFIID 218
Query: 338 TPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGL 397
TPG+ HR +V +DL L P L+ + + NE G T+F+G L
Sbjct: 219 TPGIVYKHRLTELVSKKDLGKLMPGKPLKPMVYQL-------NE-------GQTLFFGSL 264
Query: 398 VRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLD 457
R D ++ ++ T Y ++ ++ +KADE Y G LTPP+ K E
Sbjct: 265 ARFDFVRGERQS-FTIYSSGAIPIHRTKLEKADELYANHKGTLLTPPVVKDLEE------ 317
Query: 458 RERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPV 517
L++ ++ DV ISGLGWI + NS+ E LAVHVPK V
Sbjct: 318 LPPLVKQTIHISKGKKLDVLISGLGWIKI--------NSEAGAE-------LAVHVPKGV 362
Query: 518 EVFVRNPM 525
++ R+ +
Sbjct: 363 KIVQRDSL 370
>gi|392948629|ref|ZP_10314234.1| ribosome biogenesis GTPase, YqeH family [Lactobacillus pentosus
KCA1]
gi|392436134|gb|EIW14053.1| ribosome biogenesis GTPase, YqeH family [Lactobacillus pentosus
KCA1]
Length = 378
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 125/386 (32%), Positives = 193/386 (50%), Gaps = 44/386 (11%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT++ A GY P++ K + + C RC L H + I VG
Sbjct: 11 CIGCGAAIQTTDPKAAGYT-PNSALQKSLASDAQDLYCQRCFRLRHYNEIVPVG------ 63
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ R L+ +R AL+V +VDI D NGS + ++ G NP++LV K D+
Sbjct: 64 -----LTDDDFRRLLATIRDANALVVYVVDIFDLNGSIIPGLQRFVGDNPVLLVGNKEDV 118
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LP+ + +W+ + + + + V LTS+K I + + I+K ++GRDV+++G
Sbjct: 119 LPRQLRRTKLREWMNQQVRAQGIKPVDVALTSAKKGHAIDDLLAMIEKYRRGRDVFVVGV 178
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS IN ++ A K S PGTTL I+I G K+ DTPG
Sbjct: 179 TNVGKSTLINRII--------ANNTGLKDLITTSRFPGTTLDKIEI-PLDDGHKMVDTPG 229
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ + A V+ +DL ++PQ +R + F + NG T+F GG+ R+
Sbjct: 230 IIHPEQMAHVLSGDDLKLVSPQKEIRPKGFQL--------------GNGQTLFLGGVARL 275
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D++ L T T Y +L ++ T+ AD FY K +G +TPP G A D
Sbjct: 276 DIVDTLKPTG-TVYVDNNLTLHRTRTENADNFYTKHVGELITPPTGAAVA------DFPP 328
Query: 461 LLEIKFEDTERPASDVAISGLGWISV 486
L+ +F+ TE SD+ GLGW++V
Sbjct: 329 LVRHEFKVTE--TSDIVFEGLGWVTV 352
>gi|260663501|ref|ZP_05864391.1| ribosome biogenesis GTPase YqeH [Lactobacillus fermentum 28-3-CHN]
gi|260552042|gb|EEX25095.1| ribosome biogenesis GTPase YqeH [Lactobacillus fermentum 28-3-CHN]
Length = 374
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 130/387 (33%), Positives = 190/387 (49%), Gaps = 48/387 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT + DA GY K + + C RC L H + I V
Sbjct: 12 CIGCGAVIQTEDKDALGYTPASAL---NKGLETGELYCQRCFRLRHYNEIAPVS------ 62
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ LSH+R ALIV +VDI DFNGS + + G NP++LV K DL
Sbjct: 63 -----LTDDDFLRLLSHIREANALIVYVVDIFDFNGSIIPGLHRFVGKNPVLLVGNKEDL 117
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LP+ + + DW+ + + + L L S+K + + + I+K ++GRDVY++G
Sbjct: 118 LPRSLRRSKLTDWLRQQANQAGIRPLMTTLVSAKKNHQVEELLATIEKYRQGRDVYVVGV 177
Query: 281 ANVGKSAFINALLK-KMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS IN ++K + G D S PGTTL I+I G +L DTP
Sbjct: 178 TNVGKSTLINQIIKQRTGVEDLITT---------SRFPGTTLDKIEI-PLEDGHELVDTP 227
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ + A V+ AEDL +APQ ++ +++ + + TIF GG+ R
Sbjct: 228 GIIHQEQMAHVLPAEDLRLVAPQKEIKPKTYQLDEQQ--------------TIFLGGIAR 273
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D LK P LT Y +L ++ AD FY+K LG L PP + + + + L+R
Sbjct: 274 FDYLKG-PRAGLTAYFDNNLPLHRTKLANADAFYEKHLGGLLVPP-HQNEIDQFPPLER- 330
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
+F TE+ SD+ GLGWI+V
Sbjct: 331 ----FEFAITEK--SDLVFEGLGWITV 351
>gi|407978439|ref|ZP_11159270.1| GTPase YqeH [Bacillus sp. HYC-10]
gi|407414997|gb|EKF36613.1| GTPase YqeH [Bacillus sp. HYC-10]
Length = 366
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 132/425 (31%), Positives = 199/425 (46%), Gaps = 65/425 (15%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG +QT D GY P LK+ V+C RC L + + I V
Sbjct: 6 CIGCGVAIQTENKDQLGYA-PAASLLKED------VICQRCFRLKNYNEIQDVS------ 52
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ L + +LIVK+VDI DFNGS++ + + G NPI+LV KVD+
Sbjct: 53 -----LTEDDFLNILHSIGETDSLIVKVVDIFDFNGSWINGLSRIVGGNPILLVGNKVDI 107
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + + W+ + LN + V L S+ G+ V I + GR+VY++G
Sbjct: 108 LPKSVKKDRLVQWMKREAKENGLNPIDVFLISASRGQGVPEVMEAIDHYRDGRNVYVVGC 167
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS FIN ++K++ + +Q PGTTL I+I G L+DTPG
Sbjct: 168 TNVGKSTFINRIIKEVSGEENVITTSQ--------YPGTTLDAIEI-PLDDGSALFDTPG 218
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ H+ A V DL L P+ L+ ++F + NE + T+++GGL R
Sbjct: 219 IINRHQMAHYVDKNDLKILTPKKELKPRTFQL-------NEAQ-------TLYFGGLARF 264
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D +K T Y P L ++ + AD+ Y+K G L+PP EG + D
Sbjct: 265 DYVKG-GRTSFVCYMPNELNIHRTKLENADDLYEKHAGELLSPP----SKEGME--DFPP 317
Query: 461 LLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVEVF 520
L+ F ++P +D+ SGLGW++ + I+ V+ PK V VF
Sbjct: 318 LVPHTFT-IDQPKTDIVFSGLGWVTANDAGKQIK----------------VYAPKGVHVF 360
Query: 521 VRNPM 525
+R +
Sbjct: 361 MRRSL 365
>gi|375088310|ref|ZP_09734650.1| ribosome biogenesis GTPase YqeH [Dolosigranulum pigrum ATCC 51524]
gi|374562348|gb|EHR33678.1| ribosome biogenesis GTPase YqeH [Dolosigranulum pigrum ATCC 51524]
Length = 372
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 125/425 (29%), Positives = 199/425 (46%), Gaps = 62/425 (14%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +Q+ D GYV E + + + C RC L H + ++ V
Sbjct: 9 CIGCGATIQSDNKDKMGYVPASALENRNEDDLY----CKRCFRLRHYNEVSDVE------ 58
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
+++D+ L+++ ++ALIV +VDI+DFNGS + I AG NP+++V KVDL
Sbjct: 59 -----LTSDDFLNMLNNINDQRALIVNIVDIIDFNGSVITGIERFAGNNPVMIVGNKVDL 113
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK N + W+ E + L + + L S+ + + +I+K + RDVY++G+
Sbjct: 114 LPKSLKHNHIRQWLTERVHELGLRPVDISLISAVKRDSVGQLLDKIEKIRGNRDVYVVGT 173
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS IN ++K A Q+ S +PGTTLG I+I G L DTPG
Sbjct: 174 TNVGKSTLINQIVK--------LATDQRDLITTSYIPGTTLGKIEI-PLDDGHVLVDTPG 224
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ + A V+ +++ + P+ ++ ++ + NE + T+F GG+ R
Sbjct: 225 IFQSGQMAHVLSHKEMSIITPKKTIKPVTYQL-------NEKQ-------TLFLGGVARF 270
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D Y +L ++ +KAD YQ + G TPP+ E + L +
Sbjct: 271 DYKGGAGRQSFVVYASNALDIHRTKLEKADALYQAQKGKMFTPPL----PENAEHLPDMK 326
Query: 461 LLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVEVF 520
K + SD+ SGLGW+ V + + ++ H PK V+VF
Sbjct: 327 QYHFKLDG----PSDIVFSGLGWVKV----------------NASNVDVSGHAPKGVDVF 366
Query: 521 VRNPM 525
VR PM
Sbjct: 367 VRKPM 371
>gi|379723335|ref|YP_005315466.1| hypothetical protein PM3016_5625 [Paenibacillus mucilaginosus 3016]
gi|378572007|gb|AFC32317.1| YqeH [Paenibacillus mucilaginosus 3016]
Length = 368
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 127/427 (29%), Positives = 203/427 (47%), Gaps = 65/427 (15%)
Query: 100 SCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGY 159
+C GCG LQ D G+V ++ V+C RC + + + + + N
Sbjct: 5 NCAGCGVALQQENPDQLGFV-------PEQALSRTPVICQRCYRIKNYNEASGITLN--- 54
Query: 160 AGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVD 219
D+ + L H+ +L+V +VD+ DF GS ++ + G NPIILVV K+D
Sbjct: 55 --------QDDFLKLLGHVGTTDSLVVNIVDLFDFEGSMISGLPRFVGNNPIILVVNKID 106
Query: 220 LLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILG 279
LLPK T++N + +WV + L V ++ L S++ G V + + +KGRD+Y++G
Sbjct: 107 LLPKVTNYNRILNWVQRQAKEAGLKVANIVLCSARKNMGFERVIEALDEHRKGRDIYVVG 166
Query: 280 SANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
+ NVGKS IN L+ + D ++Q PGTTL ++I GG + DTP
Sbjct: 167 ATNVGKSTLINRLIHDYSDLDAELTVSQ--------YPGTTLDLVRI-PLDDGGSIIDTP 217
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ HR +V+ +DL + P ++ F + S G ++++G L R
Sbjct: 218 GIVYKHRLTELVNKKDLMKVMPDKPMKPLVFQLNS--------------GQSVYFGALAR 263
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDR- 458
D L+ ++ TFY SL+ + +KADE Y+ GV L PP+ + LD
Sbjct: 264 FDFLQGERQS-FTFYVSNSLEAHRTKLEKADELYENHKGVLLQPPV-------LENLDEL 315
Query: 459 ERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVE 518
+L + + DV+ISGLGW+ V+ + LA+HVP+ V+
Sbjct: 316 PKLTKHAIRIPKGGNLDVSISGLGWVKANGVQGA---------------ELAIHVPRGVK 360
Query: 519 VFVRNPM 525
V VR +
Sbjct: 361 VAVRESL 367
>gi|319651635|ref|ZP_08005762.1| GTP-binding protein [Bacillus sp. 2_A_57_CT2]
gi|317396702|gb|EFV77413.1| GTP-binding protein [Bacillus sp. 2_A_57_CT2]
Length = 368
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 135/427 (31%), Positives = 204/427 (47%), Gaps = 69/427 (16%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG +QT D GY Q +T++C RC L H + + V
Sbjct: 8 CIGCGVKVQTENPDELGYAPHSAL-------QKETIICQRCFRLKHYNEVQDVS------ 54
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ + L+ + + ALIVK+VDI DFNGS+L + G N I+LV KVDL
Sbjct: 55 -----LTDDDFLKILNEIGQSDALIVKIVDIFDFNGSWLPGLHRFVGNNKILLVGNKVDL 109
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK N + +W+ + + + L V+L S+ I +A+ I ++G+DVY++G
Sbjct: 110 LPKSVKTNKLINWMKQESKQLGLKPEEVYLASAAKGYSINEIAAAIDHYREGKDVYVVGC 169
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS FIN +LK++ GE D S PGTTL I+I G L DTP
Sbjct: 170 TNVGKSTFINRILKEVTGEGDVITT---------SHFPGTTLDIIEI-PLSDGKALVDTP 219
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ HH+ A V DL + P+ ++ + + + NE + T+F+GGL R
Sbjct: 220 GIINHHQMAHYVDKRDLKVITPKKEIKPKVYQL-------NEAQ-------TLFFGGLAR 265
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + + + L ++ T+KADE Y+ G LTPP +++ E + L
Sbjct: 266 FDYIAGGRRSFVCHFS-NELTIHRTKTEKADELYRNHAGEMLTPP-REEQMETFPEL--- 320
Query: 460 RLLEIKFEDT-ERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVE 518
+K E T + P +D+ SGLGWI+V G +A +VPK V
Sbjct: 321 ----VKHEFTIKEPKTDIVFSGLGWITV----------------NEGGAKVAAYVPKGVH 360
Query: 519 VFVRNPM 525
+R +
Sbjct: 361 AMIRKSL 367
>gi|184155783|ref|YP_001844123.1| GTP-binding protein YqeH [Lactobacillus fermentum IFO 3956]
gi|227515625|ref|ZP_03945674.1| GTP-binding protein [Lactobacillus fermentum ATCC 14931]
gi|385812532|ref|YP_005848923.1| GTP-binding protein [Lactobacillus fermentum CECT 5716]
gi|183227127|dbj|BAG27643.1| GTPase [Lactobacillus fermentum IFO 3956]
gi|227086055|gb|EEI21367.1| GTP-binding protein [Lactobacillus fermentum ATCC 14931]
gi|299783429|gb|ADJ41427.1| GTP-binding protein [Lactobacillus fermentum CECT 5716]
Length = 374
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 130/387 (33%), Positives = 190/387 (49%), Gaps = 48/387 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT + DA GY K + + C RC L H + I V
Sbjct: 12 CIGCGAVIQTEDKDALGYTPASAL---NKGLETGELYCQRCFRLRHYNEIAPVS------ 62
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ LSH+R ALIV +VDI DFNGS + + G NP++LV K DL
Sbjct: 63 -----LTDDDFLRLLSHIREANALIVYVVDIFDFNGSIIPGLHRFVGKNPVLLVGNKEDL 117
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LP+ + + DW+ + + + L L S+K + + + I+K ++GRDVY++G
Sbjct: 118 LPRSLRRSKLTDWLRQQANQAGIRPLMTTLVSAKKNHQVEELLATIEKYRQGRDVYVVGV 177
Query: 281 ANVGKSAFINALLK-KMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS IN ++K + G D S PGTTL I+I G +L DTP
Sbjct: 178 TNVGKSTLINQIIKQRTGVEDLITT---------SRFPGTTLDKIEI-PLDDGHELVDTP 227
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ + A V+ AEDL +APQ ++ +++ + + TIF GG+ R
Sbjct: 228 GIIHQEQMAHVLPAEDLRLVAPQKEIKPKTYQLDEQQ--------------TIFLGGIAR 273
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D LK P LT Y +L ++ AD FY+K LG L PP + + + + L+R
Sbjct: 274 FDYLKG-PRAGLTAYFDNNLPLHRTKLANADAFYEKHLGGLLVPP-HQNEIDQFPPLER- 330
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
+F TE+ SD+ GLGWI+V
Sbjct: 331 ----FEFAITEK--SDLVFEGLGWITV 351
>gi|365902898|ref|ZP_09440721.1| GTPase YqeH [Lactobacillus malefermentans KCTC 3548]
Length = 378
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 128/398 (32%), Positives = 197/398 (49%), Gaps = 55/398 (13%)
Query: 94 VNSAVASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAV 153
VN C GCGA +QT++ DAPGY P++ KK + + C RC L H + I V
Sbjct: 8 VNDEDLYCIGCGAKIQTTDRDAPGYT-PES--ALKKGMENNELYCQRCFRLRHYNEIVPV 64
Query: 154 GGNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIIL 213
G ++ D+ + LS +R ALIV ++DI DFNGS + + G NP++L
Sbjct: 65 G-----------LTDDDFLKLLSQIRDADALIVYVMDIFDFNGSVIPGLHRFVGNNPVLL 113
Query: 214 VVTKVDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGR 273
V K D+LPK + + DW+ + + ++ + V L S+K+ + + +I K +K R
Sbjct: 114 VGNKEDILPKSLRRSKLKDWLRQRANEAGIHPIDVALVSAKTNQSVDSLLVQIDKYRKNR 173
Query: 274 DVYILGSANVGKSAFINALLKK-MGERDPAAAMAQKYRPIQSAVPGTTLGPIQI----DA 328
DVYI+G NVGKS IN ++++ G+ D S PGTTL I+I D
Sbjct: 174 DVYIVGVTNVGKSTLINQIIRQNTGKADLITT---------SRFPGTTLDRIEIPLDDDH 224
Query: 329 FLGGGKLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLN 388
F L DTPG+ + A ++ DL + PQ ++ + + + NE
Sbjct: 225 F-----LVDTPGIIHAEQMAHYLNGNDLKIVTPQKSIKPKVYQL-------NE------- 265
Query: 389 GFTIFWGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQ 448
G T+F+GG+ R D + P+ T Y +L ++ + AD Y+ +LG L+PP ++
Sbjct: 266 GQTLFFGGVARFD-YENGPKNGFTVYAENNLYIHRTKLENADSLYEAQLGKLLSPPSTEE 324
Query: 449 KAEGWKGLDRERLLEIKFEDTERPASDVAISGLGWISV 486
E + L R L K SD+ I GLGW++V
Sbjct: 325 DIEAFPKLVRHELKTAK-------KSDLVIEGLGWVTV 355
>gi|386726062|ref|YP_006192388.1| hypothetical protein B2K_28655 [Paenibacillus mucilaginosus K02]
gi|384093187|gb|AFH64623.1| hypothetical protein B2K_28655 [Paenibacillus mucilaginosus K02]
Length = 368
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 127/427 (29%), Positives = 202/427 (47%), Gaps = 65/427 (15%)
Query: 100 SCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGY 159
+C GCG LQ D G+V ++ V+C RC + + + + + N
Sbjct: 5 NCAGCGVALQQENPDQLGFV-------PEQALSRTPVICQRCFRIKNYNEASGITLN--- 54
Query: 160 AGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVD 219
D+ + L H+ +L+V +VD+ DF GS ++ + G NPIILVV K+D
Sbjct: 55 --------QDDFLKLLGHVGTTDSLVVNIVDLFDFEGSMISGLARFVGNNPIILVVNKID 106
Query: 220 LLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILG 279
LLPK T++N + +WV + L V + L S++ G V + + +KGRD+Y++G
Sbjct: 107 LLPKVTNYNRILNWVQRQAKEAGLKVADIVLCSARKNMGFERVIEALDEHRKGRDIYVVG 166
Query: 280 SANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
+ NVGKS IN L+ + D ++Q PGTTL ++I GG + DTP
Sbjct: 167 ATNVGKSTLINRLIHDYSDLDAELTVSQ--------YPGTTLDLVRI-PLDDGGSIIDTP 217
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ HR +V+ +DL + P ++ F + S G ++++G L R
Sbjct: 218 GIVYKHRLTELVNKKDLMKVMPDKPMKPLVFQLNS--------------GQSVYFGALAR 263
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDR- 458
D L+ ++ TFY SL+ + +KADE Y+ GV L PP+ + LD
Sbjct: 264 FDFLQGERQS-FTFYVSNSLEAHRTKLEKADELYENHKGVLLQPPV-------LENLDEL 315
Query: 459 ERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVE 518
+L + + DV+ISGLGW+ V+ + LA+HVP+ V+
Sbjct: 316 PKLTKHAIRIPKGGNLDVSISGLGWVKANGVQGA---------------ELAIHVPRGVK 360
Query: 519 VFVRNPM 525
V VR +
Sbjct: 361 VAVRESL 367
>gi|229918235|ref|YP_002886881.1| GTP-binding protein YqeH [Exiguobacterium sp. AT1b]
gi|229469664|gb|ACQ71436.1| Nitric-oxide synthase [Exiguobacterium sp. AT1b]
Length = 370
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 119/393 (30%), Positives = 191/393 (48%), Gaps = 61/393 (15%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG +QT + + GY + + V+C RC L H + + V
Sbjct: 8 CAGCGVAIQTEDPNGVGYAPKSALDRE-------IVICQRCFKLKHYNQVQDVE------ 54
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
+S D+ L+ + ++AL++K+VDI DFNGS+L ++ G+NP++LV KVDL
Sbjct: 55 -----LSDDDFLRILNGISSKEALVIKIVDIFDFNGSWLPGLQRSVGSNPVLLVGNKVDL 109
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + N + +W+ + LN + VHL S+K GI +A +I+ +KG+DV+++G
Sbjct: 110 LPKSVNPNRMANWMKAEAKELGLNPIDVHLISAKKGHGIDELAEKIEYYRKGKDVFVVGC 169
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS IN ++K+ GE D A + PGTTL + LYDTPG
Sbjct: 170 TNVGKSTLINQVIKRFGEEDEAIITVSHF-------PGTTL-DLIDIPLDDDANLYDTPG 221
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ H+ A V A+DL + P+ ++ F + + T+++GGL R+
Sbjct: 222 IINRHQMAHYVDAKDLKTITPKKEIKPHVFQLNPQQ--------------TLYFGGLARL 267
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D L+ + Y L+ + ++ADE Y + +G L PP E+
Sbjct: 268 DYLEG-NKRSFVIYMSNELKAHRTKLERADELYDQHIGKMLNPP-------------NEK 313
Query: 461 LLEI-------KFEDTERPASDVAISGLGWISV 486
LEI +F + +D+ SGLGW+++
Sbjct: 314 TLEILPPLVRHEFSLRDGVKTDIVFSGLGWVAI 346
>gi|337748425|ref|YP_004642587.1| hypothetical protein KNP414_04185 [Paenibacillus mucilaginosus
KNP414]
gi|336299614|gb|AEI42717.1| YqeH [Paenibacillus mucilaginosus KNP414]
Length = 368
Score = 184 bits (468), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 127/427 (29%), Positives = 202/427 (47%), Gaps = 65/427 (15%)
Query: 100 SCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGY 159
+C GCG LQ D G+V ++ V+C RC + + + + + N
Sbjct: 5 NCAGCGVALQQENPDQLGFV-------PEQALSRTPVICQRCYRIKNYNEASGITLN--- 54
Query: 160 AGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVD 219
D+ + L H+ +L+V +VD+ DF GS ++ + G NPIILVV K+D
Sbjct: 55 --------QDDFLKLLGHVGTTDSLVVNIVDLFDFEGSMISGLPRFVGNNPIILVVNKID 106
Query: 220 LLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILG 279
LLPK T++N + +WV + L V + L S++ G V + + +KGRD+Y++G
Sbjct: 107 LLPKVTNYNRILNWVQRQAKEAGLKVADIVLCSARKNMGFERVIEALDEHRKGRDIYVVG 166
Query: 280 SANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
+ NVGKS IN L+ + D ++Q PGTTL ++I GG + DTP
Sbjct: 167 ATNVGKSTLINRLIHDYSDLDAELTVSQ--------YPGTTLDLVRI-PLDDGGSIIDTP 217
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ HR +V+ +DL + P ++ F + S G ++++G L R
Sbjct: 218 GIVYKHRLTELVNKKDLMKVMPDKPMKPLVFQLNS--------------GQSVYFGALAR 263
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDR- 458
D L+ ++ TFY SL+ + +KADE Y+ GV L PP+ + LD
Sbjct: 264 FDFLQGERQS-FTFYVSNSLEAHRTKLEKADELYENHKGVLLQPPV-------LENLDEL 315
Query: 459 ERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVE 518
+L + + DV+ISGLGW+ V+ + LA+HVP+ V+
Sbjct: 316 PKLTKHAIRIPKGGNLDVSISGLGWVKANGVQGA---------------ELAIHVPRGVK 360
Query: 519 VFVRNPM 525
V VR +
Sbjct: 361 VAVRESL 367
>gi|157693068|ref|YP_001487530.1| GTP-binding protein YqeH [Bacillus pumilus SAFR-032]
gi|157681826|gb|ABV62970.1| GTP-binding protein [Bacillus pumilus SAFR-032]
Length = 366
Score = 184 bits (468), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 132/425 (31%), Positives = 201/425 (47%), Gaps = 65/425 (15%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG +QT + D GY P +K+ V+C RC L + + I V
Sbjct: 6 CIGCGVAIQTEDKDQLGYA-PAASLMKED------VICQRCFRLKNYNEIQDVS------ 52
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ L + +LIVK+VDI DFNGS++ + + G NPI+LV KVD+
Sbjct: 53 -----LTEDDFLNILHSIGETDSLIVKVVDIFDFNGSWINGLSRIVGGNPILLVGNKVDI 107
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + + W+ + LN ++V L S+ G+ V I ++GR+VY++G
Sbjct: 108 LPKSVKKDRLVHWMKREAKENGLNPIAVFLISASRGQGVPEVMEAIDHYREGRNVYVVGC 167
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS FIN ++K++ + +Q PGTTL I+I G L+DTPG
Sbjct: 168 TNVGKSTFINRIIKEVSGEENVITTSQ--------YPGTTLDAIEI-PLDDGSALFDTPG 218
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ H+ A V DL L P+ L+ ++F + NE + T+++GGL R
Sbjct: 219 IINRHQMAHYVSKNDLKILTPKKELKPRTFQL-------NEAQ-------TLYFGGLARF 264
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D +K T Y P L ++ + AD+ Y+K G L+PP EG + D
Sbjct: 265 DYVKG-GRTSFVCYMPNELNIHRTKLENADDLYEKHAGELLSPP----SKEGME--DFPP 317
Query: 461 LLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVEVF 520
L+ F ++P D+ SGLGWI+ + I+ V+ PK V VF
Sbjct: 318 LVPHTFT-FDQPKMDIVFSGLGWITANDAGKQIK----------------VYAPKGVHVF 360
Query: 521 VRNPM 525
+R +
Sbjct: 361 MRRSL 365
>gi|398311510|ref|ZP_10514984.1| GTPase YqeH [Bacillus mojavensis RO-H-1]
Length = 366
Score = 184 bits (468), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 130/425 (30%), Positives = 198/425 (46%), Gaps = 65/425 (15%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG +QT + + GY P + L K+ +V+C RC L + + I V
Sbjct: 6 CIGCGVSIQTEDKNGLGYAPPAS--LSKE-----SVICQRCFRLKNYNEIQDVS------ 52
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ L + +L+VK+VDI DFNGS++ ++ L G NPI+LV K D+
Sbjct: 53 -----LTDDDFLNILHGIGETDSLVVKIVDIFDFNGSWINGLQRLVGGNPILLVGNKADI 107
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W+ + L + V L S+ GI V I+ + G+DVY++G
Sbjct: 108 LPKSLKRERLIQWMKREAKELGLKPIDVFLVSAGRGQGIREVIDAIEHYRNGKDVYVVGC 167
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS FIN ++K++ D +Q PGTTL I+I G LYDTPG
Sbjct: 168 TNVGKSTFINRIIKEVSGEDNIITTSQ--------FPGTTLDAIEI-PLDDGSALYDTPG 218
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ HH+ A V+ +DL L+P+ L+ ++F + + T+++GGL R
Sbjct: 219 IINHHQMAHYVNKKDLKVLSPKKELKPRTFQLNDQQ--------------TLYFGGLARF 264
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D + Y P L ++ + AD Y+K G LTPP GK + +
Sbjct: 265 DYVSG-ERAAFVCYMPNELMIHRTKLENADALYEKHAGELLTPP-GKDDMDEFP-----E 317
Query: 461 LLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVEVF 520
L+ F E+ +D+ SGLGW++V + I + PK V VF
Sbjct: 318 LVAHTFTMKEQ-KTDIVFSGLGWVTVHDADKKI----------------TAYAPKGVHVF 360
Query: 521 VRNPM 525
VR +
Sbjct: 361 VRRSL 365
>gi|256847505|ref|ZP_05552951.1| ribosome biogenesis GTPase YqeH [Lactobacillus coleohominis
101-4-CHN]
gi|256716169|gb|EEU31144.1| ribosome biogenesis GTPase YqeH [Lactobacillus coleohominis
101-4-CHN]
Length = 375
Score = 184 bits (468), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 127/387 (32%), Positives = 188/387 (48%), Gaps = 48/387 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +Q+ + + PGY KK + C RC L H + I V
Sbjct: 13 CIGCGAIIQSEDPNEPGYTPAAAV---KKGLVNNELYCQRCFRLRHYNEIAPVS------ 63
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ + L+H+R ALIV +VDI DFNGS + + G NP++LV K DL
Sbjct: 64 -----LTDDDFLQLLNHIREANALIVYVVDIFDFNGSLIPGLHRFVGNNPVLLVGNKEDL 118
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LP + DW+ + + + L S+K I + + I+K ++ RDVY++G
Sbjct: 119 LPHSLRRTKLRDWIRQQANVAGIRPIDTLLVSAKKNHQIEELLNTIEKYRQHRDVYVVGV 178
Query: 281 ANVGKSAFINALLK-KMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS IN ++K + G +D S PGTTL I+I G +L DTP
Sbjct: 179 TNVGKSTLINQIIKQRTGVKDLITT---------SRFPGTTLDKIEI-PLDDGQELIDTP 228
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A V+ A+DL +APQ ++ +++ + +G TIF GG+ R
Sbjct: 229 GIIHQHQMAHVLPAQDLKLVAPQKEIKPRTYQLS--------------DGQTIFMGGIAR 274
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D LK P+ + Y +LQ++ AD FY+K LG LTPP K + L+R
Sbjct: 275 FDYLKG-PKVGVVAYFDNNLQLHRTKFSNADTFYEKHLGDLLTPPTKTTKGQ-IPSLER- 331
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
FE + +D+ GLGWI+V
Sbjct: 332 ------FEFSTDEKTDLVYEGLGWITV 352
>gi|52081117|ref|YP_079908.1| GTP-binding protein YqeH [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|319644926|ref|ZP_07999159.1| YqeH protein [Bacillus sp. BT1B_CT2]
gi|404489998|ref|YP_006714104.1| GTPase YqeH [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|423683094|ref|ZP_17657933.1| GTP-binding protein YqeH [Bacillus licheniformis WX-02]
gi|52004328|gb|AAU24270.1| essential GTPase [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|52348997|gb|AAU41631.1| ribosomal assembly protein YqeH [Bacillus licheniformis DSM 13 =
ATCC 14580]
gi|317392735|gb|EFV73529.1| YqeH protein [Bacillus sp. BT1B_CT2]
gi|383439868|gb|EID47643.1| GTP-binding protein YqeH [Bacillus licheniformis WX-02]
Length = 366
Score = 184 bits (468), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 126/425 (29%), Positives = 195/425 (45%), Gaps = 65/425 (15%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG +QT + + GY P+ LK+ V+C RC L + + I V
Sbjct: 6 CIGCGVAIQTEDKNKLGYA-PEASLLKED------VICQRCFRLKNYNEIQDVS------ 52
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ + L + +LIVK+VDI DFNGS++ + G NPI+L+ K D+
Sbjct: 53 -----LTDDDFLKILHGIGETDSLIVKIVDIFDFNGSWINGLNRFVGGNPILLIGNKADI 107
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + +W+ + L + V L S+ G+ I+ ++G+DVY++G
Sbjct: 108 LPKSVKRERLVNWMKREAKELGLRPVDVLLVSAGRGQGMKDAIDAIEHYRQGKDVYVVGC 167
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS FIN ++K++ D +Q PGTTL I+I G +YDTPG
Sbjct: 168 TNVGKSTFINRIIKEVSGEDDIITTSQ--------YPGTTLDAIEI-PLDDGSAMYDTPG 218
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ HH+ A V DL L P+ L+ ++F + E T+F+GGL R
Sbjct: 219 IINHHQMAHYVAKRDLKILTPKKELKPRTFQLNEEQ--------------TLFFGGLSRF 264
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D + Y P L+++ + AD+ Y+K G L PP K+ + + L +
Sbjct: 265 DYASG-GRSSFVCYMPNELKIHRTKLENADQLYEKHAGEMLAPP-AKEDLDSFPALVKHT 322
Query: 461 LLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVEVF 520
+ P +DV SGLGW++V+ + I H PK V VF
Sbjct: 323 FT------IKEPKTDVVFSGLGWVTVQGANQKI----------------VAHAPKGVHVF 360
Query: 521 VRNPM 525
+R +
Sbjct: 361 LRRSL 365
>gi|380032375|ref|YP_004889366.1| ribosome biogenesis GTPase, YqeH family [Lactobacillus plantarum
WCFS1]
gi|342241618|emb|CCC78852.1| ribosome biogenesis GTPase, YqeH family [Lactobacillus plantarum
WCFS1]
Length = 378
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 132/425 (31%), Positives = 203/425 (47%), Gaps = 61/425 (14%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT++ A GY P++ K + + + C RC L H + I VG
Sbjct: 11 CIGCGAAIQTTDPKAAGYT-PNSALQKSLASEAQDLYCQRCFRLRHYNEIVPVG------ 63
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ R L+ +R AL+V +VDI D NGS + ++ G NP++LV K D+
Sbjct: 64 -----LTDDDFRHLLATIRDANALVVYVVDIFDLNGSIIPGLQRFVGDNPVLLVGNKEDV 118
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LP+ + +W+ + + + + V LTS+K I + + I+K ++GRDVY++G
Sbjct: 119 LPRQLRRTKLREWMNQQVRAQGIKPVDVALTSAKKGHSIDELLAMIEKYRRGRDVYVVGV 178
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS IN ++ A K S PGTTL I+I G + DTPG
Sbjct: 179 TNVGKSTLINRII--------ANNTGLKDLITTSRFPGTTLDKIEI-PLDDGHMMVDTPG 229
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ + A V+ +DL ++PQ +R + F + NG T+F GG+ R+
Sbjct: 230 IIHPEQMAHVLSGDDLKLVSPQREIRPKGFQL--------------GNGQTLFLGGVARL 275
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D++ L T T Y +L ++ T+ AD FY K +G +TPP G A D
Sbjct: 276 DIVDTLKATG-TVYVDNNLTLHRTRTENADNFYTKHVGELITPPTGDAVA------DFPP 328
Query: 461 LLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVEVF 520
L+ +F+ TE SD+ GLGW++V + + +A PK V V
Sbjct: 329 LVRHEFKVTE--ISDIVFEGLGWVTV-----------------AADTRVAAWAPKGVAVL 369
Query: 521 VRNPM 525
R M
Sbjct: 370 TRPAM 374
>gi|433462862|ref|ZP_20420433.1| GTPase YqeH [Halobacillus sp. BAB-2008]
gi|432188318|gb|ELK45522.1| GTPase YqeH [Halobacillus sp. BAB-2008]
Length = 366
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 129/393 (32%), Positives = 188/393 (47%), Gaps = 55/393 (13%)
Query: 97 AVASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGN 156
AV C GCG +QT+ GY E + ++C RC L H + + V
Sbjct: 2 AVIQCQGCGVEIQTTNPAEAGYAPASALERED-------IICKRCFRLKHYNEVQDVP-- 52
Query: 157 GGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVT 216
D+ E L+ + LIV+LVDI DFNGSF+ ++ L G NP++LV
Sbjct: 53 ---------YQDDDFLEMLNQISATDGLIVQLVDIFDFNGSFIPGLKRLTGNNPVLLVGN 103
Query: 217 KVDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVY 276
K+D+LPK + V W+ + + L V V+L S++ GI +++ I + + G DVY
Sbjct: 104 KMDVLPKSVNHGKVKHWLKRSARENGLEVEDVYLISAEKNEGIETLSAAIDRYRNGGDVY 163
Query: 277 ILGSANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKL 335
++G+ NVGKS FIN L+ G +D A+ Y PGTTLG I I L
Sbjct: 164 VVGTTNVGKSTFINTLISNTSGVKD---AITTSY------FPGTTLGFIDI-PLDNDSSL 213
Query: 336 YDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWG 395
YDTPGV H+ A V +DL + P+ ++ + + + E T+F G
Sbjct: 214 YDTPGVIHRHQMAHYVSDKDLKLITPRKEVKPKVYQLNEEQ--------------TLFIG 259
Query: 396 GLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIG--KQKAEGW 453
GL R+D + + Y L ++ +KAD+ YQ LG L+PP K+K
Sbjct: 260 GLARLD-FEAGSRSSFICYVSNELSIHRTKLEKADDLYQNHLGELLSPPDAATKEKLPPL 318
Query: 454 KGLDRERLLEIKFEDTERPASDVAISGLGWISV 486
KG L+IK + T D+ SGLGWI+V
Sbjct: 319 KG----HTLKIKEDKT-----DIVFSGLGWITV 342
>gi|374709075|ref|ZP_09713509.1| GTPase YqeH [Sporolactobacillus inulinus CASD]
Length = 366
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 126/388 (32%), Positives = 191/388 (49%), Gaps = 53/388 (13%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG +QT + A GY K Q ++C RC L+H + + V
Sbjct: 6 CAGCGVKIQTEDPQALGYT-------PKSALQHDPIVCQRCFRLAHYNEVQDVS------ 52
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++AD+ LS + AL+V LVD+ D GS++ ++ G NP++LV K DL
Sbjct: 53 -----LTADDFLTMLSKISEHDALVVYLVDLFDSAGSWVPGLQRFVGGNPVLLVGNKSDL 107
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
PK T+ N + W+ + ++ L + V L S+ G+ VA+ I + GRDVY++G+
Sbjct: 108 FPKSTNPNKLSSWIRRSAREQGLKPVDVRLMSASKNHGLDEVAAAIDHYRNGRDVYVVGA 167
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLG-GGKLYDTP 339
NVGKS FIN L++ +G D A S PGTTL I+I LG GG LYDTP
Sbjct: 168 TNVGKSTFINHLIQHLGTGDSAITT--------SRFPGTTLDFIEIP--LGDGGNLYDTP 217
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + DL + P ++ + F + NE + T+F GGL R
Sbjct: 218 GIINDHQAAHFIDPRDLKKIMPVKEIKPKVFQL-------NERQ-------TLFLGGLGR 263
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
+D + + L Y SL ++ ++AD+ Y ++LG LTPP K +D
Sbjct: 264 LDYIGPARRS-LIVYASSSLVIHRTKMEQADDLYARQLGHLLTPPSEK--------VDLP 314
Query: 460 RLLEIKFEDTERPASDVAISGLGWISVE 487
+ F T++ D+ SGLGWI+++
Sbjct: 315 PMERFDFR-TDQEECDLVFSGLGWITIK 341
>gi|357010653|ref|ZP_09075652.1| YqeH [Paenibacillus elgii B69]
Length = 375
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 137/428 (32%), Positives = 204/428 (47%), Gaps = 63/428 (14%)
Query: 95 NSAVASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVG 154
+S SC GCG LQT + + GYV ++C RC +
Sbjct: 7 HSETNSCAGCGVALQTEQPEQLGYVPAQALARTP-------IICQRCFRIK--------- 50
Query: 155 GNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILV 214
N A G D LR L+H+ +L+V +VDI DF GS ++ + G NP+ILV
Sbjct: 51 -NYNEASGITLNQDDFLR-LLTHVGGTDSLVVNIVDIFDFEGSMISGLARFVGTNPVILV 108
Query: 215 VTKVDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRD 274
V K+DLLPK T++N + +WV + L V+ V L S+K G V ++ +KGRD
Sbjct: 109 VNKIDLLPKVTNYNRIVNWVQRQAKEAGLRVVEVVLCSAKKNMGFERVIEALELHRKGRD 168
Query: 275 VYILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGK 334
+Y++G+ NVGKS IN L++ + D ++Q PGTTL ++I G
Sbjct: 169 IYVVGATNVGKSTLINRLIRDYSDLDAELTVSQ--------YPGTTLDLVRI-PLDDGAS 219
Query: 335 LYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFW 394
+ DTPG+ HR +V +DL + P ++ F + + TIF+
Sbjct: 220 IIDTPGIVYKHRLTELVSKKDLMKVMPDRPIKPLVFQLNDQQ--------------TIFF 265
Query: 395 GGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWK 454
G LVR D ++ ++ TFY +LQ + D+ADE Y++ GV L+PP ++ E K
Sbjct: 266 GSLVRFDFVQGERQS-FTFYVSNALQAHRTKLDRADELYEEHRGVLLSPPSLEELEELPK 324
Query: 455 GLDRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVP 514
L + + + DV++SGLGWI V T+G L +HVP
Sbjct: 325 ------LTKHPIRIPKNASLDVSVSGLGWIKV--------------NGTAGA-DLVIHVP 363
Query: 515 KPVEVFVR 522
K V+V VR
Sbjct: 364 KGVKVAVR 371
>gi|408356444|ref|YP_006844975.1| GTP-binding protein [Amphibacillus xylanus NBRC 15112]
gi|407727215|dbj|BAM47213.1| putative GTP-binding protein [Amphibacillus xylanus NBRC 15112]
Length = 369
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 135/427 (31%), Positives = 202/427 (47%), Gaps = 69/427 (16%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG +QT PGYV E + ++C RC L + + + V G
Sbjct: 9 CQGCGVAIQTENKQEPGYVPNSALE-------NEVIICQRCFRLKNYNEVQDVPYTDG-- 59
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
+ + +S + K+LIVK+VDI DFNGSF+ + L G N +I++ KVDL
Sbjct: 60 ---------DFLQMVSQIANTKSLIVKMVDIFDFNGSFIRGLHRLTGNNKVIIIGNKVDL 110
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK T+ + V W+ + + V V+L S+K+ G V I+ ++G+DVY++GS
Sbjct: 111 LPKSTNLSRVRQWIKKEAADLGVTVQDVYLISAKTGQGFDEVKQAIEYHREGQDVYVVGS 170
Query: 281 ANVGKSAFINALLK-KMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS FIN L+ +G +D S PGTTLG I I LYDTP
Sbjct: 171 TNVGKSTFINYLINDSVGTKDAITT---------SYFPGTTLGFIDI-PLDDHSSLYDTP 220
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
GV + + ED+ + P ++ +++ + S+ T+F GGL R
Sbjct: 221 GVVNRGQLVHYLAKEDIKLITPNKEIKPRTYQLNSQQ--------------TLFIGGLAR 266
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D +K ++ T Y P ++++ +KAD+ Y LG LTPP G+ A+ + L E
Sbjct: 267 FDFIKGERQS-FTCYFPNRVELHRTKLEKADQLYLDHLGTMLTPP-GENTAKDYPKL-VE 323
Query: 460 RLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGE-LHLAVHVPKPVE 518
+ +++ E D+ GLGWIS+ SGE +AVH P V
Sbjct: 324 QTIKLSGEKV-----DLVFPGLGWISL-----------------SGEPATVAVHSPFDVP 361
Query: 519 VFVRNPM 525
V RN +
Sbjct: 362 VSRRNSI 368
>gi|300767171|ref|ZP_07077083.1| ribosome biogenesis GTPase YqeH [Lactobacillus plantarum subsp.
plantarum ATCC 14917]
gi|308180390|ref|YP_003924518.1| ribosome biogenesis GTPase YqeH [Lactobacillus plantarum subsp.
plantarum ST-III]
gi|418275051|ref|ZP_12890463.1| ribosome biogenesis GTPase, YqeH family [Lactobacillus plantarum
subsp. plantarum NC8]
gi|448821057|ref|YP_007414219.1| Ribosome biogenesis GTPase, YqeH family [Lactobacillus plantarum
ZJ316]
gi|300494990|gb|EFK30146.1| ribosome biogenesis GTPase YqeH [Lactobacillus plantarum subsp.
plantarum ATCC 14917]
gi|308045881|gb|ADN98424.1| ribosome biogenesis GTPase YqeH [Lactobacillus plantarum subsp.
plantarum ST-III]
gi|376009522|gb|EHS82850.1| ribosome biogenesis GTPase, YqeH family [Lactobacillus plantarum
subsp. plantarum NC8]
gi|448274554|gb|AGE39073.1| Ribosome biogenesis GTPase, YqeH family [Lactobacillus plantarum
ZJ316]
Length = 378
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 132/425 (31%), Positives = 202/425 (47%), Gaps = 61/425 (14%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT++ A GY P++ K + + C RC L H + I VG
Sbjct: 11 CIGCGAAIQTTDPKAAGYT-PNSALQKSLASDAQDLYCQRCFRLRHYNEIVPVG------ 63
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ R L+ +R AL+V +VDI D NGS + ++ G NP++LV K D+
Sbjct: 64 -----LTDDDFRHLLATIRDANALVVYVVDIFDLNGSIIPGLQRFVGDNPVLLVGNKEDV 118
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LP+ + +W+ + + + + V LTS+K I + + I+K ++GRDVY++G
Sbjct: 119 LPRQLRRTKLREWMNQQVRAQGIKPVDVALTSAKKGHSIDELLAMIEKYRRGRDVYVVGV 178
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS IN ++ A K S PGTTL I+I G + DTPG
Sbjct: 179 TNVGKSTLINRII--------ANNTGLKDLITTSRFPGTTLDKIEI-PLDDGHMMVDTPG 229
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ + A V+ +DL ++PQ +R + F + NG T+F GG+ R+
Sbjct: 230 IIHPEQMAHVLSGDDLKLVSPQREIRPKGFQL--------------GNGQTLFLGGVARL 275
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D++ L T T Y +L ++ T+ AD FY K +G +TPP G A D
Sbjct: 276 DIVDTLKATG-TVYVDNNLTLHRTRTENADNFYTKHVGELITPPTGDAVA------DFPP 328
Query: 461 LLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVEVF 520
L+ +F+ TE SD+ GLGW++V + + +A PK V V
Sbjct: 329 LVRHEFKVTE--ISDIVFEGLGWVTV-----------------AADTRVAAWAPKGVAVL 369
Query: 521 VRNPM 525
R M
Sbjct: 370 TRPAM 374
>gi|260584202|ref|ZP_05851950.1| ribosome biogenesis GTPase YqeH [Granulicatella elegans ATCC
700633]
gi|260158828|gb|EEW93896.1| ribosome biogenesis GTPase YqeH [Granulicatella elegans ATCC
700633]
Length = 371
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 121/388 (31%), Positives = 192/388 (49%), Gaps = 47/388 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRC-RLLSHGHMITAVGGNGGY 159
C GCGA +QT + GY T L K + + V C RC RL ++ + +A
Sbjct: 8 CMGCGATIQTENHEEIGYTP--TSVLTKMLEKEEPVYCQRCFRLRNYNELQSAS------ 59
Query: 160 AGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVD 219
+S D+ + LS + E AL+V +VD+ D GS ++ ++ G NP++ V KVD
Sbjct: 60 ------LSDDDFLKMLSSIAEEDALVVYVVDLFDLYGSMISGLKRFIGNNPVLFVANKVD 113
Query: 220 LLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILG 279
L PK + N + +W+ + + + L S+ I + +I + ++G+D Y++G
Sbjct: 114 LYPKSVNRNRLKNWIERFAKEYGIRPVDTILVSANKRIQIDELLDKINEYRQGKDAYVVG 173
Query: 280 SANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS IN L++ +G +Q PGTTLG I I F L DTP
Sbjct: 174 VTNVGKSTLINKLIQSIGGTKDVITTSQ--------FPGTTLGQIYI-PFDEKSSLIDTP 224
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + +++ + PQ L+ ++F + +E TIF GGLVR
Sbjct: 225 GIIHRHQIAHYLAEKEVKKVLPQKELQPKTFQLNAEQ--------------TIFIGGLVR 270
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
+D K LTFY P++++++ +KADEFY + G LTPP G +
Sbjct: 271 VDYTKG-ERNSLTFYTPQTIELHRTKLEKADEFYARHNGTILTPPTGDNVKQ------YP 323
Query: 460 RLLEIKFEDTERPASDVAISGLGWISVE 487
L +I F E+ SD+ I+GLGW++++
Sbjct: 324 TLQKIVFSVKEK--SDIVIAGLGWVTIQ 349
>gi|365157946|ref|ZP_09354190.1| ribosome biogenesis GTPase YqeH [Bacillus smithii 7_3_47FAA]
gi|363622356|gb|EHL73522.1| ribosome biogenesis GTPase YqeH [Bacillus smithii 7_3_47FAA]
Length = 368
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 138/426 (32%), Positives = 202/426 (47%), Gaps = 67/426 (15%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG +QT + + GY P Q + V+C RC L H + I V
Sbjct: 8 CTGCGVKIQTEDPEKVGYTPPSAL-------QKEQVVCQRCFRLKHYNEIQDVS------ 54
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ + L L K+LIVK+VDI DFNGS+L + G NP++L+ K DL
Sbjct: 55 -----LTDDDFLKILHTLGETKSLIVKIVDIFDFNGSWLPGLPRFVGNNPVLLIGNKEDL 109
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + +W+ + K L + V L S+ I I+ + G+DVY++G
Sbjct: 110 LPKSLKRERLINWMKKEAEKLGLRPIDVILVSASKGHFIREAMEMIEHYRAGKDVYVVGC 169
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS FIN +LK+ GE S PGTTL I+I G L DTPG
Sbjct: 170 TNVGKSTFINRILKESGESGELIT--------TSHFPGTTLDKIEI-PLEDGSALIDTPG 220
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ HH+ A V DL + P+ ++ + + + NE + T+F+GGL R+
Sbjct: 221 IINHHQMAHFVDKRDLKIIMPKKEIKPKVYQL-------NEKQ-------TLFFGGLSRL 266
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D LK L Y P LQ++ +KAD Y+K +G L PP +++ + + L R
Sbjct: 267 DYLKG-GRRSLVCYMPNELQIHRTKLEKADSLYEKHVGEMLVPP-REEQLDDFPPLIRH- 323
Query: 461 LLEIKFEDTERPASDVAISGLGWISV-EPVRRSIRNSDINLESTSGELHLAVHVPKPVEV 519
E K D + +D+ SGLGW++V EP G + +A +VPK V V
Sbjct: 324 --EFKITDAK---TDIVFSGLGWVTVHEP----------------GAV-VAAYVPKGVSV 361
Query: 520 FVRNPM 525
+R +
Sbjct: 362 LIRKSL 367
>gi|154686827|ref|YP_001421988.1| GTP-binding protein YqeH [Bacillus amyloliquefaciens FZB42]
gi|154352678|gb|ABS74757.1| YqeH [Bacillus amyloliquefaciens FZB42]
Length = 366
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 131/425 (30%), Positives = 191/425 (44%), Gaps = 65/425 (15%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG +QT + GY K + V+C RC L + + I V
Sbjct: 6 CIGCGVTIQTEDKQGLGYA-------PKASLTKENVICQRCFRLKNYNEIQDVS------ 52
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ L + +LIVK+VDI DFNGS++ + G NPIILV K D+
Sbjct: 53 -----LTDDDFLNILHTIGDTDSLIVKVVDIFDFNGSWINGLNRFVGGNPIILVGNKADI 107
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W+ + L L V L S+ G+ V I+ ++GRDVY++G
Sbjct: 108 LPKSVKRERLVQWMKREAKEYGLKPLDVFLISASRGQGMKEVIDAIEHYREGRDVYVVGC 167
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS FIN ++K++ + +Q PGTTL I+I G LYDTPG
Sbjct: 168 TNVGKSTFINRIIKEVSGEENIITTSQ--------FPGTTLDAIEI-PLDDGSALYDTPG 218
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ HH+ A V DL L P+ L+ ++F + NE + T+++GGL R
Sbjct: 219 IINHHQMAHYVDKRDLKVLTPKKELKPRTFQL-------NEKQ-------TLYFGGLARF 264
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D + +T Y P L ++ + AD+ Y+K G LTPP G LD
Sbjct: 265 DYVSG-DKTAFVCYMPNELMIHRTKLENADDLYEKHAGELLTPP-------GKDHLDEFP 316
Query: 461 LLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVEVF 520
L + +D+ SGLGW++V+ + I + PK V VF
Sbjct: 317 ELTPHTFTIKEGKTDIVFSGLGWVTVQQADKKI----------------TAYAPKGVHVF 360
Query: 521 VRNPM 525
VR +
Sbjct: 361 VRRSL 365
>gi|254556448|ref|YP_003062865.1| GTP-binding protein YqeH [Lactobacillus plantarum JDM1]
gi|254045375|gb|ACT62168.1| GTP-binding protein YqeH [Lactobacillus plantarum JDM1]
Length = 378
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 132/425 (31%), Positives = 201/425 (47%), Gaps = 61/425 (14%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT+ A GY P++ K + + C RC L H + I VG
Sbjct: 11 CIGCGAAIQTTNPKAAGYT-PNSALQKSLASDAQDLYCQRCFRLRHYNEIVPVG------ 63
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ R L+ +R AL+V +VDI D NGS + ++ G NP++LV K D+
Sbjct: 64 -----LTDDDFRHLLATIRDANALVVYVVDIFDLNGSIIPGLQRFVGDNPVLLVGNKEDV 118
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LP+ + +W+ + + + + V LTS+K I + + I+K ++GRDVY++G
Sbjct: 119 LPRQLRRTKLREWMNQQVRAQGIKPVDVALTSAKKGHSIDELLAMIEKYRRGRDVYVVGV 178
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS IN ++ A K S PGTTL I+I G + DTPG
Sbjct: 179 TNVGKSTLINRII--------ANNTGLKDLITTSRFPGTTLDKIEI-PLDDGHMMVDTPG 229
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ + A V+ +DL ++PQ +R + F + NG T+F GG+ R+
Sbjct: 230 IIHPEQMAHVLSGDDLKLVSPQREIRPKGFQL--------------GNGQTLFLGGVARL 275
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D++ L T T Y +L ++ T+ AD FY K +G +TPP G A D
Sbjct: 276 DIVDTLKATG-TVYVDNNLTLHRTRTENADNFYTKHVGELITPPTGDAVA------DFPP 328
Query: 461 LLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVEVF 520
L+ +F+ TE SD+ GLGW++V + + +A PK V V
Sbjct: 329 LVRHEFKVTE--ISDIVFEGLGWVTV-----------------AADTRVAAWAPKGVAVL 369
Query: 521 VRNPM 525
R M
Sbjct: 370 TRPAM 374
>gi|328957108|ref|YP_004374494.1| GTP-binding protein YqeH [Carnobacterium sp. 17-4]
gi|328673432|gb|AEB29478.1| GTP-binding protein YqeH [Carnobacterium sp. 17-4]
Length = 377
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 131/396 (33%), Positives = 197/396 (49%), Gaps = 49/396 (12%)
Query: 95 NSAVASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVG 154
N C GCGA +QT++ +A GY E K + V C RC L H + I V
Sbjct: 8 NEEEIRCIGCGAIIQTTDKEAVGYTPASALE---KGLEKGEVYCQRCFRLRHYNEIQDVQ 64
Query: 155 GNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILV 214
++ D+ + L+ L E ALIV ++DI DFNGS + + G NP++LV
Sbjct: 65 -----------LTDDDFLKLLNELGSEDALIVNVIDIFDFNGSLIPGLHRFVGKNPVLLV 113
Query: 215 VTKVDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRD 274
KVDLLPK + W+ E ++ L V LTS+ A + + I+K +KGRD
Sbjct: 114 GNKVDLLPKSLKRGKMTQWLRERAHEEGLRPEDVLLTSAMKPAEMEILLDAIEKHRKGRD 173
Query: 275 VYILGSANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGG 333
V+++G NVGKS IN ++K G +D S PGTTL I+I G
Sbjct: 174 VFVVGVTNVGKSTLINQIIKSTAGVQDLITT---------SQFPGTTLDRIEI-PLDDGK 223
Query: 334 KLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIF 393
L DTPG+ H+ A V+ +DL +AP+ ++ + + NE G T+F
Sbjct: 224 NLIDTPGIIHRHQMAHVLGDKDLKLIAPKKEIKPIVYQL-------NE-------GQTLF 269
Query: 394 WGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGW 453
+GG+ R D LK + T + L ++ +KADE YQK++G L PP + + +G+
Sbjct: 270 FGGVARFDYLKGARHS-FTCFVSNDLNIHRTKLEKADELYQKQVGKLLQPP-REDEVDGF 327
Query: 454 KGLDRERLLEIKFEDTERPASDVAISGLGWISV-EP 488
L ++FE + + +D+ +GLGW++V EP
Sbjct: 328 PEL-------VRFEFSVKEKADIVFAGLGWVTVNEP 356
>gi|56963402|ref|YP_175133.1| GTP-binding protein YqeH [Bacillus clausii KSM-K16]
gi|56909645|dbj|BAD64172.1| GTPase [Bacillus clausii KSM-K16]
Length = 372
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 135/426 (31%), Positives = 203/426 (47%), Gaps = 66/426 (15%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG +QT + GY P++ LK+ V+C RC L H + I V
Sbjct: 10 CSGCGVSIQTEDPKKLGYA-PES-ALKRD-----VVVCKRCYRLKHYNEIEPVS------ 56
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
+ ++ + + L +KALIVK+VD+VDF GS+++ + G NP++LV KVDL
Sbjct: 57 -----IGDEDFQAMFASLHHKKALIVKVVDVVDFYGSWISGAQRFVGKNPVLLVANKVDL 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK T+ N + +W+ ++ + L L V L S+ + GI VA I ++GRDVY++G
Sbjct: 112 LPKSTNRNKLTNWLKKSASDLGLKPLEVKLMSTVTGEGIDDVALTIDDMRRGRDVYVVGC 171
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGK-LYDTP 339
NVGKS+FIN +L G+ A + PGTTL ID LG GK L DTP
Sbjct: 172 TNVGKSSFINRILAMHGQTGEAMITTSHF-------PGTTLA--MIDIPLGDGKSLVDTP 222
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A ++ + L + P+ ++ + + G T+F GGL R
Sbjct: 223 GLVNRHQYAHLLSVKGLKEITPKKEIKPIVYQL--------------KEGQTLFLGGLAR 268
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D +K P + Y L ++ +KAD+ Y K G L PP + G
Sbjct: 269 FDFVKG-PPSSFIVYVANRLHIHRTKMEKADDLYSKHGGELLVPPYKED------GEQVR 321
Query: 460 RLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVEV 519
L++ F+ + P D+ SGLGWI ++ T G + + H PK V V
Sbjct: 322 PLVKHSFKVGKEPM-DIVFSGLGWIRIQ---------------TEGAI-VEAHAPKEVGV 364
Query: 520 FVRNPM 525
+R +
Sbjct: 365 AIRRSI 370
>gi|375363100|ref|YP_005131139.1| GTP-binding protein YqeH [Bacillus amyloliquefaciens subsp.
plantarum CAU B946]
gi|451346227|ref|YP_007444858.1| GTPase YqeH [Bacillus amyloliquefaciens IT-45]
gi|452856330|ref|YP_007498013.1| GTPase involved in ribosome 30S assembly [Bacillus
amyloliquefaciens subsp. plantarum UCMB5036]
gi|371569094|emb|CCF05944.1| GTP-binding protein YqeH [Bacillus amyloliquefaciens subsp.
plantarum CAU B946]
gi|449849985|gb|AGF26977.1| GTPase YqeH [Bacillus amyloliquefaciens IT-45]
gi|452080590|emb|CCP22353.1| GTPase involved in ribosome 30S assembly [Bacillus
amyloliquefaciens subsp. plantarum UCMB5036]
Length = 366
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 131/425 (30%), Positives = 190/425 (44%), Gaps = 65/425 (15%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG +QT + GY K + V+C RC L + + I V
Sbjct: 6 CIGCGVTIQTEDKQGLGYA-------PKASLTKENVICQRCFRLKNYNEIQDVS------ 52
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ L + +LIVK+VDI DFNGS++ + G NPIILV K D+
Sbjct: 53 -----LTDDDFLNILHTIGDTDSLIVKVVDIFDFNGSWINGLNRFVGGNPIILVGNKADI 107
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W+ + L L V L S+ G+ V I+ ++GRDVY++G
Sbjct: 108 LPKSVKRERLVQWMKREAKEYGLKPLDVFLISASRGQGMKEVIDAIEHYREGRDVYVVGC 167
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS FIN ++K++ + +Q PGTTL I+I G LYDTPG
Sbjct: 168 TNVGKSTFINRIIKEVSGEENIITTSQ--------FPGTTLDAIEI-PLDDGSALYDTPG 218
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ HH+ A V DL L P+ L+ ++F + NE + T+++GGL R
Sbjct: 219 IINHHQMAHYVDKRDLKVLTPKKELKPRTFQL-------NEKQ-------TLYFGGLARF 264
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D + +T Y P L ++ + AD Y+K G LTPP G LD
Sbjct: 265 DYVSG-DKTAFVCYMPNELMIHRTKLENADALYEKHAGELLTPP-------GKDHLDEFP 316
Query: 461 LLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVEVF 520
L + +D+ SGLGW++V+ + I + PK V VF
Sbjct: 317 ELTAHTFTIKEGKTDIVFSGLGWVTVQQADKKI----------------TAYAPKGVHVF 360
Query: 521 VRNPM 525
VR +
Sbjct: 361 VRRSL 365
>gi|352517436|ref|YP_004886753.1| putative GTP-binding protein [Tetragenococcus halophilus NBRC
12172]
gi|348601543|dbj|BAK94589.1| putative GTP-binding protein [Tetragenococcus halophilus NBRC
12172]
Length = 369
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 127/391 (32%), Positives = 192/391 (49%), Gaps = 47/391 (12%)
Query: 100 SCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGY 159
C GCGA +QT + + GY E K + V C RC L H + I V
Sbjct: 6 QCIGCGAVIQTEDKNEIGYTPKSVLE---KGMESGEVYCQRCFRLRHYNEIQDVS----- 57
Query: 160 AGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVD 219
++ D+ L+ + ++ ALIV +VDI DFNGS + + G NP++LV KVD
Sbjct: 58 ------LTDDDFLRLLNEIGQKDALIVNVVDIFDFNGSIIPGLHRFVGDNPVLLVGNKVD 111
Query: 220 LLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILG 279
+LPK + W+ E K L + V LTS+K + + I+K ++GRDVYI+G
Sbjct: 112 VLPKSLKKTKLKQWMKEQAHDKGLRPVDVLLTSAKRNDELDALLDMIEKYREGRDVYIVG 171
Query: 280 SANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS IN +++K + K S PGTTL I+I G L DTP
Sbjct: 172 VTNVGKSTLINQIVQKTAD--------VKELITTSKFPGTTLDKIEI-PLEDGQFLIDTP 222
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + +DL +APQ ++ + + + + G T+F GGL R
Sbjct: 223 GIIHRHQMAHFLGEKDLKIIAPQKEIKPKIYQLNA--------------GQTLFLGGLAR 268
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D +K ++ T + L ++ + AD+FY+K LG L PP +K E + L+R
Sbjct: 269 FDFVKG-EKSSFTVFVSNDLMIHRTKLENADKFYEKHLGELLQPPRNDEK-EHFPELER- 325
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV-EPV 489
FE + + +D+ +GLGW++V +PV
Sbjct: 326 ------FEFSIKEKTDIVFAGLGWVTVKDPV 350
>gi|296333274|ref|ZP_06875727.1| GTP-binding protein YqeH [Bacillus subtilis subsp. spizizenii ATCC
6633]
gi|305675222|ref|YP_003866894.1| ribosome 30S assembly GTPase [Bacillus subtilis subsp. spizizenii
str. W23]
gi|296149472|gb|EFG90368.1| GTP-binding protein YqeH [Bacillus subtilis subsp. spizizenii ATCC
6633]
gi|305413466|gb|ADM38585.1| GTPase involved in ribosome 30S assembly [Bacillus subtilis subsp.
spizizenii str. W23]
Length = 366
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 133/428 (31%), Positives = 202/428 (47%), Gaps = 71/428 (16%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG +QT + GY P + L K++ V+C RC L + + I V
Sbjct: 6 CIGCGVTIQTEDKTGLGYAPPAS--LTKEN-----VICQRCFRLKNYNEIQDVS------ 52
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ L + +L+VK+VDI DFNGS++ ++ L G NPI+LV K D+
Sbjct: 53 -----LTDDDFLNILHGIGETDSLVVKIVDIFDFNGSWINGLQRLVGGNPILLVGNKADI 107
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W+ + L + V L S+ GI V I+ + G+DVY++G
Sbjct: 108 LPKSLKRERLIQWMKREAKELGLKPVDVFLVSAGRGQGIREVIDAIEHYRNGKDVYVVGC 167
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS FIN ++K++ GE D S PGTTL I+I G LYDTP
Sbjct: 168 TNVGKSTFINRVIKEVSGEEDIITT---------SQFPGTTLDAIEI-PLDDGSALYDTP 217
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ HH+ A V+ +DL L+P+ L+ ++F + + T+++GGL R
Sbjct: 218 GIINHHQMAHYVNKKDLKILSPKKELKPRTFQLNDQQ--------------TLYFGGLAR 263
Query: 400 IDLL--KVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLD 457
D + + P C Y P L ++ + AD Y+K G LTPP GK + + + L
Sbjct: 264 FDYISGERSPFIC---YMPNELMIHRTKLENADALYEKHAGELLTPP-GKDEMDEFPELV 319
Query: 458 RERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPV 517
+DT+ +D+ SGLGW++V + + + PK V
Sbjct: 320 AHTF---TIKDTK---TDIVFSGLGWVTVHDADKKV----------------TAYAPKGV 357
Query: 518 EVFVRNPM 525
VFVR +
Sbjct: 358 HVFVRRSL 365
>gi|308174356|ref|YP_003921061.1| GTPase [Bacillus amyloliquefaciens DSM 7]
gi|307607220|emb|CBI43591.1| GTPase involved in ribosome 30S assembly [Bacillus
amyloliquefaciens DSM 7]
Length = 366
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 131/425 (30%), Positives = 190/425 (44%), Gaps = 65/425 (15%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG +QT + GY K + V+C RC L + + I V
Sbjct: 6 CIGCGVTIQTEDKKGLGYA-------PKASLTKENVICQRCFRLKNYNEIQDVS------ 52
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ L + +LIVK+VDI DFNGS++ + G NPIILV K D+
Sbjct: 53 -----LTDDDFLNILHTIGDTDSLIVKVVDIFDFNGSWINGLNRFVGGNPIILVGNKADI 107
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W+ + L L V L S+ G+ V I+ ++GRDVY++G
Sbjct: 108 LPKSVKRERLVQWMKREAKEYGLKPLDVFLISASRGQGMKEVIDAIEHYREGRDVYVVGC 167
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS FIN ++K++ + +Q PGTTL I+I G LYDTPG
Sbjct: 168 TNVGKSTFINRIIKEVSGEENIITTSQ--------FPGTTLDAIEI-PLDDGSALYDTPG 218
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ HH+ A V DL L P+ L+ ++F + NE + T+++GGL R
Sbjct: 219 IINHHQMAHYVDKRDLKVLTPKKELKPRTFQL-------NEKQ-------TLYFGGLARF 264
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D + +T Y P L ++ + AD Y+K G LTPP G LD
Sbjct: 265 DYVSG-DKTAFVCYMPNELMIHRTKLENADALYEKHAGELLTPP-------GKDHLDEFP 316
Query: 461 LLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVEVF 520
L + +D+ SGLGW++V+ + I + PK V VF
Sbjct: 317 ELTAHTFTIKEGKTDIVFSGLGWVTVQQADKKI----------------TAYAPKGVHVF 360
Query: 521 VRNPM 525
VR +
Sbjct: 361 VRRSL 365
>gi|424780547|ref|ZP_18207420.1| GTP-binding protein YqeH, required for biogenesis of 30S ribosome
subunit [Catellicoccus marimammalium M35/04/3]
gi|422842949|gb|EKU27396.1| GTP-binding protein YqeH, required for biogenesis of 30S ribosome
subunit [Catellicoccus marimammalium M35/04/3]
Length = 371
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 125/387 (32%), Positives = 189/387 (48%), Gaps = 47/387 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG P+QT + + GY + L+K K + C RC L H + I V
Sbjct: 8 CIGCGVPIQTEDKEGLGYTPKSS--LQKSEESGKALYCQRCFRLRHYNEIQDVS------ 59
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ L+ +R + ALI+ +VDI DFNGS + + G N ++LV K DL
Sbjct: 60 -----LTDDDFLRLLNEIRTKDALIINVVDIFDFNGSIIKGLHRFIGDNELLLVGNKRDL 114
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W+ E + L V LTS+K ++ + S I++ ++GRDVYI+G
Sbjct: 115 LPKSLKKGRLIQWMKERAHEIGLRPEEVLLTSAKKKEDVLELLSTIEEYRQGRDVYIVGV 174
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS INA+++ AA+ ++ S PGTTL I+I G + DTPG
Sbjct: 175 TNVGKSTLINAIIQ--------AAVGEESVITTSQFPGTTLDLIEI-PLDDGHYIIDTPG 225
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ + A + DL A+ P+ L+ +++ + + G T+F GGL R
Sbjct: 226 IIHREQMAHYLSPNDLKAITPKKELKPKTYQLNA--------------GQTLFLGGLARF 271
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D L+ + Y + L ++ +KAD FYQK +G L PP L+
Sbjct: 272 DYLEG-DKGSFVVYTARDLMIHRTKLEKADAFYQKHVGELLQPP---------TDLEHYP 321
Query: 461 LLE-IKFEDTERPASDVAISGLGWISV 486
L E ++FE T + D+ SGLGWI+V
Sbjct: 322 LPELVRFEFTAKEKMDIVFSGLGWITV 348
>gi|350266771|ref|YP_004878078.1| hypothetical protein GYO_2837 [Bacillus subtilis subsp. spizizenii
TU-B-10]
gi|349599658|gb|AEP87446.1| YqeH [Bacillus subtilis subsp. spizizenii TU-B-10]
Length = 366
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 133/428 (31%), Positives = 202/428 (47%), Gaps = 71/428 (16%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG +QT + GY P + L K++ V+C RC L + + I V
Sbjct: 6 CIGCGVTIQTEDKTGLGYAPPAS--LTKEN-----VICQRCFRLKNYNEIQDVS------ 52
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ L + +L+VK+VDI DFNGS++ ++ L G NPI+LV K D+
Sbjct: 53 -----LTDDDFLNILHGIGETDSLVVKIVDIFDFNGSWINGLQRLVGGNPILLVGNKADI 107
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W+ + L + V L S+ GI V I+ + G+DVY++G
Sbjct: 108 LPKSLKRERLIQWMKREAKELGLKPVDVFLVSAGRGQGIREVIDAIEHYRNGKDVYVVGC 167
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS FIN ++K++ GE D S PGTTL I+I G LYDTP
Sbjct: 168 TNVGKSTFINRVIKEVSGEEDIITT---------SQFPGTTLDAIEI-PLDDGSALYDTP 217
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ HH+ A V+ +DL L+P+ L+ ++F + + T+++GGL R
Sbjct: 218 GIINHHQMAHYVNKKDLKILSPKKELKPRTFQLNDQQ--------------TLYFGGLAR 263
Query: 400 IDLL--KVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLD 457
D + + P C Y P L ++ + AD Y+K G LTPP GK + + + L
Sbjct: 264 FDYVSGERSPFIC---YMPNELMIHRTKLENADALYEKHAGELLTPP-GKDEMDEFPELV 319
Query: 458 RERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPV 517
+DT+ +D+ SGLGW++V + + + PK V
Sbjct: 320 AHTF---TIKDTK---TDIVFSGLGWVTVHDADKKV----------------TAYAPKGV 357
Query: 518 EVFVRNPM 525
VFVR +
Sbjct: 358 HVFVRRSL 365
>gi|81429003|ref|YP_396003.1| GTP-binding protein YqeH [Lactobacillus sakei subsp. sakei 23K]
gi|78610645|emb|CAI55696.1| Putative GTP-binding protein [Lactobacillus sakei subsp. sakei 23K]
Length = 378
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 123/386 (31%), Positives = 193/386 (50%), Gaps = 44/386 (11%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT++ +A GY P++ KK + + C RC L H + I+ + N
Sbjct: 14 CIGCGAQIQTTDKEALGYT-PNS--ALKKGLETGQLYCQRCFRLRHYNEISDIKLND--- 67
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
D+ L+ + ALIV +VDI DFNGS + + G NP+ILV KVD+
Sbjct: 68 --------DDFLALLNQIGDSDALIVNVVDIFDFNGSLIPGLHRFIGDNPVILVGNKVDI 119
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LP + N V +W+ + + L+ + L S+K + + + I++E+KGRDVY++G
Sbjct: 120 LPTALNPNRVINWIQKEAKEHGLHPIETMLVSAKKGNSVDDLLAVIERERKGRDVYVVGV 179
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS IN ++K+ G D ++ PGTTL I I + L DTPG
Sbjct: 180 TNVGKSTLINRIIKQTGILDSDVITTSQF-------PGTTLDRIDIPLYEDDHALIDTPG 232
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ + A +H +DL +APQ +++ + + + NE + T+F GGL R
Sbjct: 233 IIHAQQMAHYLHDKDLRLIAPQKQIKPKVYQL-------NEQQ-------TLFLGGLARF 278
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D L+ P Y L ++ + AD FY ++LG L PP + A+ + L R
Sbjct: 279 DYLQG-PRHGFVGYFDNELYIHRTKLENADNFYVRQLGDLLQPPHPEDLAD-FPDLQR-- 334
Query: 461 LLEIKFEDTERPASDVAISGLGWISV 486
+E + + SD+ +GLGWI++
Sbjct: 335 -----YEFSTKEKSDLVFAGLGWITL 355
>gi|375309512|ref|ZP_09774793.1| hypothetical protein WG8_3318 [Paenibacillus sp. Aloe-11]
gi|375078821|gb|EHS57048.1| hypothetical protein WG8_3318 [Paenibacillus sp. Aloe-11]
Length = 375
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 131/426 (30%), Positives = 206/426 (48%), Gaps = 63/426 (14%)
Query: 97 AVASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGN 156
V C GCG +QT+ + PGY+ +K + V+C RC + + + ++V
Sbjct: 9 TVVKCSGCGITMQTTSPELPGYI-------PEKLLTREPVICQRCFRIKNYNETSSVT-- 59
Query: 157 GGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVT 216
V DE + LS + + AL++ +VDI DF GS ++ ++ G+NP+IL V
Sbjct: 60 ---------VDQDEFLKLLSQIGDKDALVIHIVDIFDFEGSLISGLQRFVGSNPVILAVN 110
Query: 217 KVDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVY 276
K DLLPK T++N V +WV + ++ L + L S+K G + + + + RDVY
Sbjct: 111 KTDLLPKVTNWNKVRNWVQKQAKEQGLRTADIVLCSAKKNQGFDRLLDVVSELRDNRDVY 170
Query: 277 ILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLY 336
++G+ NVGKS IN L++ + M Q+ S PGTTL + I G +
Sbjct: 171 VVGATNVGKSTLINRLIRDYSD------MEQEL--TTSRYPGTTLDMVNI-PLDDGKHII 221
Query: 337 DTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGG 396
DTPG+ R + +V DL A+ P L+ ++ + S G T+F+GG
Sbjct: 222 DTPGIVYPWRFSEIVSRRDLSAIMPDKPLKPAAYQLDS--------------GQTLFFGG 267
Query: 397 LVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGL 456
+ R D ++ ++ T Y L+++ ++AD+ + G L+PP Q AE +
Sbjct: 268 MGRFDFIEGQHQS-FTCYINGGLKIHRTKLERADQLFADHAGELLSPPTRDQLAEMPEWT 326
Query: 457 DRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKP 516
E F + SD+ ISGLGWI V NSD SG L +AVHVP+
Sbjct: 327 RHE------FRVPRKAPSDIYISGLGWIRV--------NSD------SGAL-VAVHVPRG 365
Query: 517 VEVFVR 522
+ V +R
Sbjct: 366 IRVLLR 371
>gi|354806742|ref|ZP_09040222.1| ribosome biogenesis GTPase YqeH [Lactobacillus curvatus CRL 705]
gi|354514717|gb|EHE86684.1| ribosome biogenesis GTPase YqeH [Lactobacillus curvatus CRL 705]
Length = 377
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 122/386 (31%), Positives = 194/386 (50%), Gaps = 44/386 (11%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT + +A GY P++ KK + + C RC L H + I+ + N
Sbjct: 13 CIGCGARIQTMDKEALGYT-PNS--ALKKGLETGQLYCQRCFRLRHYNEISDIKLND--- 66
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
D+ L+ + ALIV +VDI DFNGS + + G NP+ILV KVD+
Sbjct: 67 --------DDFLALLNQIGDSDALIVNVVDIFDFNGSLIPGLHRFIGDNPVILVGNKVDI 118
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LP + N V +W+ + + L+ + L S+K + + + I++E+KGRDVY++G
Sbjct: 119 LPSALNPNKVINWIQKEAKEHGLHPVETMLVSAKKGNSVDELLAVIERERKGRDVYVVGV 178
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS IN ++K+ G D ++ PGTTL I I + L DTPG
Sbjct: 179 TNVGKSTLINRIIKQTGILDSDVITTSQF-------PGTTLDRIDIPLYEDDHALIDTPG 231
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ + A +H +DL +APQ R++ + + + NE + T+F GGL R
Sbjct: 232 IMHAQQMAHYLHDKDLRLIAPQKRIKPKVYQL-------NEQQ-------TLFLGGLARF 277
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D ++ + ++ L ++ + AD+FY K+LG L PP + A+ + L R
Sbjct: 278 DFIQGARHGFVGYFD-NELYIHRTKLENADQFYAKQLGDMLQPPHPEDLAD-FPELQR-- 333
Query: 461 LLEIKFEDTERPASDVAISGLGWISV 486
+E + + SD+ +GLGWI++
Sbjct: 334 -----YEFSTKQKSDLVFAGLGWITL 354
>gi|394992033|ref|ZP_10384826.1| GTPase YqeH [Bacillus sp. 916]
gi|393807049|gb|EJD68375.1| GTPase YqeH [Bacillus sp. 916]
Length = 366
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 131/425 (30%), Positives = 190/425 (44%), Gaps = 65/425 (15%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG +QT + GY K + V+C RC L + + I V
Sbjct: 6 CIGCGVTIQTEDKQGLGYA-------PKASLTKENVICQRCFRLKNYNEIQDVS------ 52
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ L + +LIVK+VDI DFNGS++ + G NPIILV K D+
Sbjct: 53 -----LTDDDFLNILHTIGDTDSLIVKVVDIFDFNGSWINGLNRFVGGNPIILVGNKADI 107
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W+ + L L V L S+ G+ V I+ ++GRDVY++G
Sbjct: 108 LPKSVKRERLVQWMKREAKEYGLKPLDVFLISASRGQGMKEVIDAIEHYREGRDVYVVGC 167
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS FIN ++K++ + +Q PGTTL I+I G LYDTPG
Sbjct: 168 TNVGKSTFINRIIKEVSGEENIITTSQ--------FPGTTLDAIEI-PLDDGSALYDTPG 218
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ HH+ A V DL L P+ L+ ++F + NE + T+++GGL R
Sbjct: 219 IINHHQMAHYVDKRDLKVLTPKKELKPRTFQL-------NEKQ-------TLYFGGLARF 264
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D + +T Y P L ++ + AD Y+K G LTPP G LD
Sbjct: 265 DYVSG-DKTAFVCYMPNELMIHRTKLENADALYEKHAGELLTPP-------GKDHLDEFP 316
Query: 461 LLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVEVF 520
L + +D+ SGLGW++V+ + I + PK V VF
Sbjct: 317 ELTPHTFTIKEGKTDIVFSGLGWVTVQQADKKI----------------TAYAPKGVHVF 360
Query: 521 VRNPM 525
VR +
Sbjct: 361 VRRSL 365
>gi|379727858|ref|YP_005320043.1| GTP-binding protein YqeH [Melissococcus plutonius DAT561]
gi|376318761|dbj|BAL62548.1| GTP-binding protein YqeH [Melissococcus plutonius DAT561]
Length = 369
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 120/387 (31%), Positives = 187/387 (48%), Gaps = 46/387 (11%)
Query: 100 SCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGY 159
C GCGA +QT GY+ YE K+ + + C RC L H + I +V
Sbjct: 6 QCIGCGAVIQTETPKKLGYLPKSAYEKGKEKQE---IYCQRCFRLRHYNEIQSVD----- 57
Query: 160 AGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVD 219
++ D+ L+ L +E ALI+ LVDI DF+GS ++ + G NPI+L+ K D
Sbjct: 58 ------LTNDDFLRLLNELNKEDALIINLVDIFDFDGSLISSLSRFVGNNPILLIGNKRD 111
Query: 220 LLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILG 279
+LPK + + W+ E + L + + L S+K+ + IV + I+ + GRDVYI+G
Sbjct: 112 ILPKSLKKHKLIKWMKERAYDEGLRPIDIQLISAKNPSEIVELLETIEYYRNGRDVYIVG 171
Query: 280 SANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS IN ++K+ + +Q PGTTL I+I G L DTP
Sbjct: 172 VTNVGKSTLINQIIKQTSGEEEVITTSQ--------FPGTTLDKIKI-PLADGQFLIDTP 222
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ HH+ A + ++L + PQ ++ + + + + G +F+GG+ R
Sbjct: 223 GIIHHHQMAHYLGKKELKKIMPQKEIKPKIYQLNA--------------GQILFFGGMAR 268
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + Y L ++ AD FY K LG L PP K+ A G+ L
Sbjct: 269 FDFI-MGDRNSFIAYLANDLTIHRTKMANADAFYGKHLGGLLEPPNQKEVA-GFPEL--- 323
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
+++E + + SD+ SGLGWI+V
Sbjct: 324 ----VRYEFSIKEKSDIVFSGLGWITV 346
>gi|384266179|ref|YP_005421886.1| GTP-binding protein YqeH [Bacillus amyloliquefaciens subsp.
plantarum YAU B9601-Y2]
gi|380499532|emb|CCG50570.1| GTP-binding protein YqeH [Bacillus amyloliquefaciens subsp.
plantarum YAU B9601-Y2]
Length = 366
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 131/425 (30%), Positives = 190/425 (44%), Gaps = 65/425 (15%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG +QT + GY K + V+C RC L + + I V
Sbjct: 6 CIGCGVAIQTEDKQGLGYA-------PKASLTKENVICQRCFRLKNYNEIQDVS------ 52
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ L + +LIVK+VDI DFNGS++ + G NPIILV K D+
Sbjct: 53 -----LTDDDFLNILHTIGDTDSLIVKVVDIFDFNGSWINGLNRFVGGNPIILVGNKADI 107
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W+ + L L V L S+ G+ V I+ ++GRDVY++G
Sbjct: 108 LPKSVKRERLVQWMKREAKEYGLKPLDVFLISASRGQGMKEVIDAIEHYREGRDVYVVGC 167
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS FIN ++K++ + +Q PGTTL I+I G LYDTPG
Sbjct: 168 TNVGKSTFINRIIKEVSGEENIITTSQ--------FPGTTLDAIEI-PLDDGSALYDTPG 218
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ HH+ A V DL L P+ L+ ++F + NE + T+++GGL R
Sbjct: 219 IINHHQMAHYVDKRDLKVLTPKKELKPRTFQL-------NEKQ-------TLYFGGLARF 264
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D + +T Y P L ++ + AD Y+K G LTPP G LD
Sbjct: 265 DYVSG-DKTAFVCYMPNELMIHRTKLENADALYEKHAGELLTPP-------GKDHLDEFP 316
Query: 461 LLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVEVF 520
L + +D+ SGLGW++V+ + I + PK V VF
Sbjct: 317 ELTPHTFTIKEGKTDIVFSGLGWVTVQQADKKI----------------TAYAPKGVHVF 360
Query: 521 VRNPM 525
VR +
Sbjct: 361 VRRSL 365
>gi|421730914|ref|ZP_16170040.1| GTPase YqeH [Bacillus amyloliquefaciens subsp. plantarum M27]
gi|407075068|gb|EKE48055.1| GTPase YqeH [Bacillus amyloliquefaciens subsp. plantarum M27]
Length = 366
Score = 181 bits (460), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 131/425 (30%), Positives = 189/425 (44%), Gaps = 65/425 (15%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG +QT + GY K + V+C RC L + + I V
Sbjct: 6 CIGCGVTIQTEDKQGLGYA-------PKASLTKENVICQRCFRLKNYNEIQDVS------ 52
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ L + +LIVK+VDI DFNGS++ + G NPIILV K D+
Sbjct: 53 -----LTDDDFLNILHTIGDTDSLIVKVVDIFDFNGSWINGLNRFVGGNPIILVGNKADI 107
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W+ + L L V L S+ G+ V I+ ++GRDVY++G
Sbjct: 108 LPKSVKRERLVQWMKREAKEYGLKPLDVFLISASRGQGMKEVIDAIEHYREGRDVYVVGC 167
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS FIN ++K++ + +Q PGTTL I+I G LYDTPG
Sbjct: 168 TNVGKSTFINRIIKEVSGEENIITTSQ--------FPGTTLDAIEI-PLDDGSALYDTPG 218
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ HH+ A V DL L P+ L+ ++F + NE + T+++GGL R
Sbjct: 219 IINHHQMAHYVDKRDLKVLTPKKELKPRTFQL-------NEKQ-------TLYFGGLARF 264
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D + +T Y P L ++ + AD Y K G LTPP G LD
Sbjct: 265 DYVSG-DKTAFVCYMPNELMIHRTKLENADALYDKHAGELLTPP-------GKDHLDEFP 316
Query: 461 LLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVEVF 520
L + +D+ SGLGW++V+ + I + PK V VF
Sbjct: 317 ELTAHTFTIKEGKTDIVFSGLGWVTVQQADKKI----------------TAYAPKGVHVF 360
Query: 521 VRNPM 525
VR +
Sbjct: 361 VRRSL 365
>gi|387899200|ref|YP_006329496.1| GTP-binding protein [Bacillus amyloliquefaciens Y2]
gi|387173310|gb|AFJ62771.1| GTP-binding protein [Bacillus amyloliquefaciens Y2]
Length = 371
Score = 181 bits (460), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 131/425 (30%), Positives = 190/425 (44%), Gaps = 65/425 (15%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG +QT + GY K + V+C RC L + + I V
Sbjct: 11 CIGCGVAIQTEDKQGLGYA-------PKASLTKENVICQRCFRLKNYNEIQDVS------ 57
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ L + +LIVK+VDI DFNGS++ + G NPIILV K D+
Sbjct: 58 -----LTDDDFLNILHTIGDTDSLIVKVVDIFDFNGSWINGLNRFVGGNPIILVGNKADI 112
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W+ + L L V L S+ G+ V I+ ++GRDVY++G
Sbjct: 113 LPKSVKRERLVQWMKREAKEYGLKPLDVFLISASRGQGMKEVIDAIEHYREGRDVYVVGC 172
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS FIN ++K++ + +Q PGTTL I+I G LYDTPG
Sbjct: 173 TNVGKSTFINRIIKEVSGEENIITTSQ--------FPGTTLDAIEI-PLDDGSALYDTPG 223
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ HH+ A V DL L P+ L+ ++F + NE + T+++GGL R
Sbjct: 224 IINHHQMAHYVDKRDLKVLTPKKELKPRTFQL-------NEKQ-------TLYFGGLARF 269
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D + +T Y P L ++ + AD Y+K G LTPP G LD
Sbjct: 270 DYVSG-DKTAFVCYMPNELMIHRTKLENADALYEKHAGELLTPP-------GKDHLDEFP 321
Query: 461 LLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVEVF 520
L + +D+ SGLGW++V+ + I + PK V VF
Sbjct: 322 ELTPHTFTIKEGKTDIVFSGLGWVTVQQADKKI----------------TAYAPKGVHVF 365
Query: 521 VRNPM 525
VR +
Sbjct: 366 VRRSL 370
>gi|429505976|ref|YP_007187160.1| GTPase YqeH [Bacillus amyloliquefaciens subsp. plantarum AS43.3]
gi|429487566|gb|AFZ91490.1| GTPase YqeH [Bacillus amyloliquefaciens subsp. plantarum AS43.3]
Length = 366
Score = 181 bits (460), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 131/425 (30%), Positives = 190/425 (44%), Gaps = 65/425 (15%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG +QT + GY K + V+C RC L + + I V
Sbjct: 6 CIGCGVTIQTEDKQGLGYA-------PKASLTKENVICQRCFRLKNYNEIQDVS------ 52
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ L + +LIVK+VDI DFNGS++ + G NPIILV K D+
Sbjct: 53 -----LTDDDFLNILHTIGDTDSLIVKVVDIFDFNGSWINGLNRFVGGNPIILVGNKADI 107
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W+ + L L V L S+ G+ V I+ ++GRDVY++G
Sbjct: 108 LPKSVKRERLVQWMKREAKEYGLKPLDVFLISASRGQGMKEVIDAIEHYREGRDVYVVGC 167
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS FIN ++K++ + +Q PGTTL I+I G LYDTPG
Sbjct: 168 TNVGKSTFINRIIKEVSGEENIITTSQ--------FPGTTLDAIEI-PLDDGSALYDTPG 218
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ HH+ A V DL L P+ L+ ++F + NE + T+++GGL R
Sbjct: 219 IINHHQMAHYVDKRDLKVLTPKKELKPRTFQL-------NEKQ-------TLYFGGLARF 264
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D + +T Y P L ++ + AD Y+K G LTPP G LD
Sbjct: 265 DYVSG-DKTAFVCYMPNELMIHRTKLENADALYEKHAGELLTPP-------GKDHLDEFP 316
Query: 461 LLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVEVF 520
L + +D+ SGLGW++V+ + I + PK V VF
Sbjct: 317 ELTAHTFTIKEGKTDIVFSGLGWVTVQQEDKKI----------------TAYAPKGVHVF 360
Query: 521 VRNPM 525
VR +
Sbjct: 361 VRRSL 365
>gi|443631866|ref|ZP_21116046.1| hypothetical protein BSI_11170 [Bacillus subtilis subsp.
inaquosorum KCTC 13429]
gi|443347981|gb|ELS62038.1| hypothetical protein BSI_11170 [Bacillus subtilis subsp.
inaquosorum KCTC 13429]
Length = 366
Score = 181 bits (459), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 134/428 (31%), Positives = 201/428 (46%), Gaps = 71/428 (16%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG +QT + GY P + L K++ V+C RC L + + I V
Sbjct: 6 CIGCGVAIQTEDKTGLGYAPPAS--LTKEN-----VICQRCFRLKNYNEIQDVS------ 52
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ L + +L+VK+VDI DFNGS++ ++ L G NPI+LV K D+
Sbjct: 53 -----LTDDDFLNILHGIGETDSLVVKIVDIFDFNGSWINGLQRLVGGNPILLVGNKADI 107
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W+ + L + V L S+ GI V I+ + G+DVY++G
Sbjct: 108 LPKSLKRERLIQWMKREAKELGLKPVDVFLVSAGRGQGIKEVIDAIEHYRNGKDVYVVGC 167
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS FIN ++K++ GE D S PGTTL I+I G LYDTP
Sbjct: 168 TNVGKSTFINRIIKEVSGEEDIITT---------SQFPGTTLDAIEI-PLDDGSALYDTP 217
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ HH+ A V+ +DL L+P+ L+ ++F + + T+++GGL R
Sbjct: 218 GIINHHQMAHYVNKKDLKILSPKKELKPRTFQLNDQQ--------------TLYFGGLAR 263
Query: 400 IDLL--KVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLD 457
D + + P C Y P L ++ + AD Y+K G LTPP GK + + + L
Sbjct: 264 FDYVSGERSPFIC---YMPNELMIHRTKLENADALYEKHAGELLTPP-GKDEMDEFPEL- 318
Query: 458 RERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPV 517
IK + T D+ SGLGW++V + + + PK V
Sbjct: 319 VAHTFTIKDKKT-----DIVFSGLGWVTVHDADKKV----------------TAYAPKGV 357
Query: 518 EVFVRNPM 525
VFVR +
Sbjct: 358 HVFVRRSL 365
>gi|332686084|ref|YP_004455858.1| GTP-binding protein YqeH [Melissococcus plutonius ATCC 35311]
gi|332370093|dbj|BAK21049.1| GTP-binding protein YqeH, required for biogenesis of 30S ribosome
subunit [Melissococcus plutonius ATCC 35311]
Length = 369
Score = 181 bits (459), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 120/387 (31%), Positives = 187/387 (48%), Gaps = 46/387 (11%)
Query: 100 SCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGY 159
C GCGA +QT GY+ YE K+ + + C RC L H + I +V
Sbjct: 6 QCIGCGAIIQTETPKKLGYLPKSAYEKGKEKQE---IYCQRCFRLRHYNEIQSVD----- 57
Query: 160 AGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVD 219
++ D+ L+ L +E ALI+ LVDI DF+GS ++ + G NPI+L+ K D
Sbjct: 58 ------LTNDDFLRLLNELNKEDALIINLVDIFDFDGSLISSLSRFVGNNPILLIGNKRD 111
Query: 220 LLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILG 279
+LPK + + W+ E + L + + L S+K+ + IV + I+ + GRDVYI+G
Sbjct: 112 ILPKSLKKHKLIKWMKERAYDEGLRPIDIQLISAKNPSEIVELLETIEYYRNGRDVYIVG 171
Query: 280 SANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS IN ++K+ + +Q PGTTL I+I G L DTP
Sbjct: 172 VTNVGKSTLINQIIKQTSGEEEVITTSQ--------FPGTTLDKIKI-PLADGQFLIDTP 222
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H++ A + ++L + P+ ++ + + + + G T+F+GG+ R
Sbjct: 223 GIIHHYQMAHYLGKKELKKIMPKKEIKPKIYQLNA--------------GQTLFFGGMAR 268
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + Y L ++ AD FY+K LG L PP K+ A D
Sbjct: 269 FDFI-MGDRNSFIAYLANGLTIHRTKMANADAFYEKHLGGLLEPPNQKEVA------DFP 321
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
L+ +F E+ SD+ SGLGWI+V
Sbjct: 322 ELVRYEFSIKEK--SDIVFSGLGWITV 346
>gi|384160215|ref|YP_005542288.1| GTPase YqeH [Bacillus amyloliquefaciens TA208]
gi|384165144|ref|YP_005546523.1| ribosome 30S assembly GTPase [Bacillus amyloliquefaciens LL3]
gi|384169285|ref|YP_005550663.1| GTP-binding protein [Bacillus amyloliquefaciens XH7]
gi|328554303|gb|AEB24795.1| GTPase YqeH [Bacillus amyloliquefaciens TA208]
gi|328912699|gb|AEB64295.1| GTPase involved in ribosome 30S assembly [Bacillus
amyloliquefaciens LL3]
gi|341828564|gb|AEK89815.1| GTP-binding protein [Bacillus amyloliquefaciens XH7]
Length = 366
Score = 181 bits (459), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 130/425 (30%), Positives = 190/425 (44%), Gaps = 65/425 (15%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG +QT + GY K + V+C RC L + + I V
Sbjct: 6 CIGCGVTIQTEDKQGLGYA-------PKASLTKENVICQRCFRLKNYNEIQDVS------ 52
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ L + +LIVK+VDI DFNGS++ + G NPIILV K D+
Sbjct: 53 -----LTDDDFLNILHTIGDTDSLIVKVVDIFDFNGSWINGLNRFVGGNPIILVGNKADI 107
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W+ + L L V L S+ G+ V I+ ++GRDVY++G
Sbjct: 108 LPKSVKRERLVQWMKREAKEYGLKPLDVFLISASRGQGMKEVIDAIEHYREGRDVYVVGC 167
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS FIN ++K++ + +Q PGTTL I+I G LYDTPG
Sbjct: 168 TNVGKSTFINRIIKEVSGEENIITTSQ--------FPGTTLDAIEI-PLDDGSALYDTPG 218
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ HH+ A V DL L P+ L+ ++F + NE + T+++GGL R
Sbjct: 219 IINHHQMAHYVDKRDLKVLTPKKELKPRTFQL-------NEKQ-------TLYFGGLARF 264
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D + ++ Y P L ++ + AD Y+K G LTPP G LD
Sbjct: 265 DYVSG-DKSAFVCYMPNELMIHRTKLENADALYEKHAGELLTPP-------GKDHLDEFP 316
Query: 461 LLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVEVF 520
L + +D+ SGLGW++V+ + I + PK V VF
Sbjct: 317 ELTAHTFTIKEGKTDIVFSGLGWVTVQNADKKI----------------TAYAPKGVHVF 360
Query: 521 VRNPM 525
VR +
Sbjct: 361 VRRSL 365
>gi|138896098|ref|YP_001126551.1| GTP-binding protein YqeH [Geobacillus thermodenitrificans NG80-2]
gi|134267611|gb|ABO67806.1| GTPase family protein [Geobacillus thermodenitrificans NG80-2]
Length = 371
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 133/425 (31%), Positives = 195/425 (45%), Gaps = 63/425 (14%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +Q + GY E + + ++C RC L H + + V
Sbjct: 9 CIGCGAAIQFEDPKKAGYAPKSVLE-----KETEEIICQRCFRLKHYNEVQDVP------ 57
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
+ ++ L + KAL+V +VDI DFNGS++ + A NPI+LV K DL
Sbjct: 58 -----LDDNDFLHMLHRIGESKALVVYIVDIFDFNGSWIPGLPRFAVNNPILLVGNKADL 112
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LP+ + + W+ + L + V L S+ G+ GV I + ++GRDVY++G
Sbjct: 113 LPRSVKYPKLLQWMRRMAEELGLRPIDVRLVSAAKGIGMTGVMETIDRYREGRDVYVVGC 172
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS FIN ++K+ A + S PGTTL I+I GG LYDTPG
Sbjct: 173 TNVGKSTFINRIIKE--------ATGKGNVITTSYFPGTTLDMIEI-PLEGGASLYDTPG 223
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ HH+ A V A DL + P+ + + + + NE G T+F+GGL R+
Sbjct: 224 IINHHQMAHFVDARDLKIITPKREIHPRVYQL-------NE-------GQTLFFGGLARL 269
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D +K Y L ++ +KAD Y +LG L PP K+ A+ + L R
Sbjct: 270 DYVKG-GRRSFVCYVANDLTIHRTKLEKADSLYANQLGSLLAPP-SKRYADEFPPL-VSR 326
Query: 461 LLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVEVF 520
L +K ER D+ SGLGW++ L VH PK V+VF
Sbjct: 327 PLSVK----ER-KMDIVFSGLGWVT----------------CNDPGAQLVVHAPKGVDVF 365
Query: 521 VRNPM 525
+R +
Sbjct: 366 IRQSL 370
>gi|227530476|ref|ZP_03960525.1| GTP-binding protein YqeH [Lactobacillus vaginalis ATCC 49540]
gi|227349581|gb|EEJ39872.1| GTP-binding protein YqeH [Lactobacillus vaginalis ATCC 49540]
Length = 375
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 126/386 (32%), Positives = 189/386 (48%), Gaps = 46/386 (11%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT++ PGY E K+++ + C RC L H + I V
Sbjct: 13 CIGCGAKIQTTDPKEPGYTPQSALEKGLKNNE---LYCQRCFRLRHYNEIAPVS------ 63
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
+S D+ LS +R + ALIV +VDI DFNGS + + G+NP++LV K DL
Sbjct: 64 -----LSDDDFLRLLSQIRNDDALIVYVVDIFDFNGSIIPGLHRFVGSNPVLLVGNKEDL 118
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LP+ + DW+ + L + L S+K I + I K ++GRDVY +G
Sbjct: 119 LPRSLRRPKLRDWLRQQANLAGLRPIDTVLVSAKKNHQIDYLLEVIDKYRQGRDVYFVGV 178
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS +N ++K+ K S PGTTL I+I G +L DTPG
Sbjct: 179 TNVGKSTLVNQIIKRQ--------TGIKELITTSKFPGTTLDKIEI-PLDDGHQLIDTPG 229
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ H+ A V+ A+DL ++PQ ++ +++ + E TIF GG+ R
Sbjct: 230 IIHQHQMAHVLSAKDLKYVSPQKEIKPRTYQLDPEQ--------------TIFIGGVARF 275
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D L + ++ +L ++ AD FY+K LG LTPP K + + + L+R+
Sbjct: 276 DYLTGHHAGIIAYFD-NNLPLHRTKLGNADRFYEKHLGELLTPPT-KDELKEFPPLERQ- 332
Query: 461 LLEIKFEDTERPASDVAISGLGWISV 486
+F +E+ SDV GLGWI+V
Sbjct: 333 ----EFHLSEK--SDVVFEGLGWITV 352
>gi|417647043|ref|ZP_12296892.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU144]
gi|329725392|gb|EGG61875.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU144]
Length = 366
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 130/432 (30%), Positives = 213/432 (49%), Gaps = 70/432 (16%)
Query: 96 SAVASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFK-TVLCGRCRLLSHGHMITAVG 154
+ + C GCGAPLQ+ DAPGYV +H+ F+ V+C RC L + + + VG
Sbjct: 2 NEILKCIGCGAPLQSENKDAPGYV--------PEHNMFREDVICRRCFRLKNYNEVQDVG 53
Query: 155 GNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILV 214
+ +++ L+ L +K +IV +VD+ DF GSF+ I+ + G IILV
Sbjct: 54 -----------MESEDFLNLLTGLSEKKGIIVNVVDVFDFEGSFINAIQRIVGNKKIILV 102
Query: 215 VTKVDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRD 274
K+DLLPK + V +W+ ++ K L V L S+ GI + I + D
Sbjct: 103 ANKIDLLPKQINHRRVKEWLRKSARKYGLEAEDVVLISANKGWGIDELLQSINHVRNKDD 162
Query: 275 VYILGSANVGKSAFINALLKK-MGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGG 333
VYI+G+ NVGKS IN L+++ +GE+D S PGTTL I I
Sbjct: 163 VYIVGTTNVGKSTLINKLIEQSVGEKDVVTT---------SRFPGTTLDMIDI-PLDEKS 212
Query: 334 KLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIF 393
++DTPG+ H+ V +L + P++ ++ + + + NE + T+F
Sbjct: 213 FMFDTPGIIQSHQMTNYVSENELKIIIPKNEIKQRVYQL-------NEKQ-------TLF 258
Query: 394 WGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGW 453
+GGL RID + + F+ L ++ T+KA++ ++ +LG L+PP Q A+ +
Sbjct: 259 FGGLARIDYVSGGNRPLVCFFS-NDLNIHRTKTEKANDLWKSQLGALLSPP---QDAQQF 314
Query: 454 KGLDRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHV 513
L+ + + ++ T+R D+ ISGLG+I+++ + I V V
Sbjct: 315 -NLNDVKAVRLETGKTKR---DIMISGLGFITIDAGAKVI-----------------VRV 353
Query: 514 PKPVEVFVRNPM 525
PK V+V +RN +
Sbjct: 354 PKHVDVILRNSI 365
>gi|418965891|ref|ZP_13517649.1| ribosome biogenesis GTPase YqeH [Streptococcus constellatus subsp.
constellatus SK53]
gi|383341525|gb|EID19784.1| ribosome biogenesis GTPase YqeH [Streptococcus constellatus subsp.
constellatus SK53]
Length = 368
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 127/387 (32%), Positives = 191/387 (49%), Gaps = 48/387 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGAP+QT D GY E K + + C RC L H + IT V
Sbjct: 6 CIGCGAPIQTKYKDKLGYTPQSALE---KGTEIGELYCQRCFRLRHYNEITDV------- 55
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
Q D LR L + AL+V +VDI DFNGS + + N ++LV K D+
Sbjct: 56 ---QLTDDDFLR-LLHEVGDSNALVVNVVDIFDFNGSVIPGLPRFVAGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + V W+ E ++ L + V LTS+++ I + +I++ +KGRDVY++G
Sbjct: 112 LPKSVKTSKVTQWLTERAHEEGLRPVDVVLTSAQNKQAIKELIEKIEQYRKGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G++D S PGTTL I+I + G +YDTP
Sbjct: 172 TNVGKSTLINAIIQEITGDKDIITT---------SRFPGTTLDKIEI-PLVDGSHIYDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + A++L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLSAKNLKYVSPKKEIKPKTYQLNPEQ--------------TLFLGGLGR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + T Y LQ++ A EFY+K +G LTPP K+ A+ + + E
Sbjct: 268 FDFVSG-NKQGFTAYFDNELQLHRTKLAGAGEFYEKHVGSLLTPPSKKEVADFPQLVKHE 326
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
+E K +DV SGLGWI V
Sbjct: 327 LKIETK--------TDVVFSGLGWIRV 345
>gi|27468201|ref|NP_764838.1| GTP-binding protein YqeH [Staphylococcus epidermidis ATCC 12228]
gi|57867067|ref|YP_188740.1| GTP-binding protein YqeH [Staphylococcus epidermidis RP62A]
gi|251811013|ref|ZP_04825486.1| GTP-binding protein [Staphylococcus epidermidis BCM-HMP0060]
gi|282875975|ref|ZP_06284842.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis SK135]
gi|293366443|ref|ZP_06613120.1| GTP-binding protein [Staphylococcus epidermidis M23864:W2(grey)]
gi|416125334|ref|ZP_11595932.1| putative GTPase [Staphylococcus epidermidis FRI909]
gi|417656084|ref|ZP_12305775.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU028]
gi|417659637|ref|ZP_12309237.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU045]
gi|417908576|ref|ZP_12552333.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU037]
gi|417913661|ref|ZP_12557324.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU109]
gi|418327846|ref|ZP_12938983.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
14.1.R1.SE]
gi|418605462|ref|ZP_13168786.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU041]
gi|418606028|ref|ZP_13169324.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU057]
gi|418609488|ref|ZP_13172640.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU065]
gi|418612812|ref|ZP_13175836.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU117]
gi|418616314|ref|ZP_13179239.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU120]
gi|418625289|ref|ZP_13187942.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU125]
gi|418626395|ref|ZP_13189007.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU126]
gi|418629354|ref|ZP_13191862.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU127]
gi|418631444|ref|ZP_13193907.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU128]
gi|418665185|ref|ZP_13226635.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU081]
gi|419771845|ref|ZP_14297891.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus IS-K]
gi|420163034|ref|ZP_14669781.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM095]
gi|420167993|ref|ZP_14674645.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM087]
gi|420170303|ref|ZP_14676864.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM070]
gi|420172649|ref|ZP_14679148.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM067]
gi|420183258|ref|ZP_14689391.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM049]
gi|420194894|ref|ZP_14700691.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM021]
gi|420197475|ref|ZP_14703199.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM020]
gi|420199838|ref|ZP_14705508.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM031]
gi|420202364|ref|ZP_14707957.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM018]
gi|420209102|ref|ZP_14714540.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM003]
gi|420211258|ref|ZP_14716632.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM001]
gi|420214056|ref|ZP_14719336.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIH05005]
gi|420216206|ref|ZP_14721422.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIH05001]
gi|420220542|ref|ZP_14725501.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIH04008]
gi|420221618|ref|ZP_14726545.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIH08001]
gi|420225793|ref|ZP_14730620.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIH06004]
gi|420227386|ref|ZP_14732155.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIH05003]
gi|420229700|ref|ZP_14734405.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIH04003]
gi|420232111|ref|ZP_14736753.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIH051668]
gi|420234758|ref|ZP_14739318.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIH051475]
gi|421606909|ref|ZP_16048160.1| GTPase YqeH [Staphylococcus epidermidis AU12-03]
gi|27315747|gb|AAO04882.1|AE016748_116 conserved hypothetical protein [Staphylococcus epidermidis ATCC
12228]
gi|57637725|gb|AAW54513.1| GTP-binding protein, putative [Staphylococcus epidermidis RP62A]
gi|251805523|gb|EES58180.1| GTP-binding protein [Staphylococcus epidermidis BCM-HMP0060]
gi|281295000|gb|EFA87527.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis SK135]
gi|291319212|gb|EFE59581.1| GTP-binding protein [Staphylococcus epidermidis M23864:W2(grey)]
gi|319400931|gb|EFV89150.1| putative GTPase [Staphylococcus epidermidis FRI909]
gi|329735274|gb|EGG71566.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU045]
gi|329737334|gb|EGG73588.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU028]
gi|341654683|gb|EGS78421.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU109]
gi|341655937|gb|EGS79660.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU037]
gi|365232624|gb|EHM73615.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
14.1.R1.SE]
gi|374402351|gb|EHQ73381.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU041]
gi|374407702|gb|EHQ78554.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU065]
gi|374409160|gb|EHQ79960.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU081]
gi|374409467|gb|EHQ80258.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU057]
gi|374817889|gb|EHR82064.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU117]
gi|374821140|gb|EHR85207.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU120]
gi|374825431|gb|EHR89367.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU125]
gi|374832829|gb|EHR96534.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU126]
gi|374834057|gb|EHR97717.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU127]
gi|374835335|gb|EHR98951.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU128]
gi|383360664|gb|EID38059.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus IS-K]
gi|394234723|gb|EJD80297.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM095]
gi|394238021|gb|EJD83507.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM087]
gi|394240641|gb|EJD86064.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM070]
gi|394241810|gb|EJD87219.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM067]
gi|394249721|gb|EJD94934.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM049]
gi|394263954|gb|EJE08675.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM021]
gi|394266282|gb|EJE10928.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM020]
gi|394269772|gb|EJE14302.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM018]
gi|394271245|gb|EJE15741.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM031]
gi|394279330|gb|EJE23638.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM003]
gi|394281711|gb|EJE25937.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM001]
gi|394283978|gb|EJE28139.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIH05005]
gi|394285895|gb|EJE29961.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIH04008]
gi|394290244|gb|EJE34108.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIH08001]
gi|394292296|gb|EJE36055.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIH05001]
gi|394293227|gb|EJE36950.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIH06004]
gi|394297192|gb|EJE40801.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIH05003]
gi|394298994|gb|EJE42549.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIH04003]
gi|394301833|gb|EJE45287.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIH051668]
gi|394304001|gb|EJE47411.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIH051475]
gi|406657378|gb|EKC83766.1| GTPase YqeH [Staphylococcus epidermidis AU12-03]
Length = 366
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 130/432 (30%), Positives = 213/432 (49%), Gaps = 70/432 (16%)
Query: 96 SAVASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFK-TVLCGRCRLLSHGHMITAVG 154
+ + C GCGAPLQ+ DAPGYV +H+ F+ V+C RC L + + + VG
Sbjct: 2 NEILKCIGCGAPLQSENKDAPGYV--------PEHNMFREDVICRRCFRLKNYNEVQDVG 53
Query: 155 GNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILV 214
+ +++ L+ L +K +IV +VD+ DF GSF+ I+ + G IILV
Sbjct: 54 -----------MESEDFLNLLTGLSEKKGIIVNVVDVFDFEGSFINAIQRIVGNKKIILV 102
Query: 215 VTKVDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRD 274
K+DLLPK + V +W+ ++ K L V L S+ GI + I + D
Sbjct: 103 ANKIDLLPKQINHRRVKEWLRKSARKYGLEAEDVVLISANKGWGIDELLQSINHVRNKDD 162
Query: 275 VYILGSANVGKSAFINALLKK-MGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGG 333
VYI+G+ NVGKS IN L+++ +GE+D S PGTTL I I
Sbjct: 163 VYIVGTTNVGKSTLINKLIEQSVGEKDVVTT---------SRFPGTTLDMIDI-PLDEKS 212
Query: 334 KLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIF 393
++DTPG+ H+ V +L + P++ ++ + + + NE + T+F
Sbjct: 213 FMFDTPGIIQSHQMTNYVSENELKIIIPKNEIKQRVYQL-------NEKQ-------TLF 258
Query: 394 WGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGW 453
+GGL RID + + F+ L ++ T+KA++ ++ +LG L+PP Q A+ +
Sbjct: 259 FGGLARIDYVSGGKRPLVCFFS-NDLNIHRTKTEKANDLWKSQLGALLSPP---QDAQQF 314
Query: 454 KGLDRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHV 513
L+ + + ++ T+R D+ ISGLG+I+++ + I V V
Sbjct: 315 -NLNDVKAVRLETGKTKR---DIMISGLGFITIDAGAKVI-----------------VRV 353
Query: 514 PKPVEVFVRNPM 525
PK V+V +RN +
Sbjct: 354 PKHVDVILRNSI 365
>gi|420177913|ref|ZP_14684247.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM057]
gi|420181402|ref|ZP_14687603.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM053]
gi|394246318|gb|EJD91578.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM053]
gi|394247100|gb|EJD92348.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM057]
Length = 366
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 130/432 (30%), Positives = 212/432 (49%), Gaps = 70/432 (16%)
Query: 96 SAVASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFK-TVLCGRCRLLSHGHMITAVG 154
+ + C GCGAPLQ+ DAPGYV +H+ F+ V+C RC L + + + VG
Sbjct: 2 NEILKCIGCGAPLQSENKDAPGYV--------PEHNMFREDVICRRCFRLKNYNEVQDVG 53
Query: 155 GNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILV 214
+ +++ L+ L +K +IV +VD+ DF GSF+ I+ + G IILV
Sbjct: 54 -----------MESEDFLNLLTGLSEKKGIIVNVVDVFDFEGSFINAIQRIVGNKKIILV 102
Query: 215 VTKVDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRD 274
K+DLLPK + V +W+ ++ K L V L S+ GI + I + D
Sbjct: 103 ANKIDLLPKQINHRRVKEWLRKSARKYGLEAEDVVLISANKGWGIDELLQSINHVRNKDD 162
Query: 275 VYILGSANVGKSAFINALLKK-MGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGG 333
VYI+G+ NVGKS IN L+++ +GE+D S PGTTL I I
Sbjct: 163 VYIVGTTNVGKSTLINKLIEQSVGEKDVVTT---------SRFPGTTLDMIDI-PLDEKS 212
Query: 334 KLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIF 393
++DTPG+ H+ V +L + P++ ++ + + NE + T+F
Sbjct: 213 FMFDTPGIIQSHQMTNYVSENELKIIIPKNEIKQHVYQL-------NEKQ-------TLF 258
Query: 394 WGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGW 453
+GGL RID + + F+ L ++ T+KA++ ++ +LG L+PP Q A+ +
Sbjct: 259 FGGLARIDYVSGGKRPLVCFFS-NDLNIHRTKTEKANDLWKSQLGALLSPP---QDAQQF 314
Query: 454 KGLDRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHV 513
L+ + + ++ T+R D+ ISGLG+I+++ + I V V
Sbjct: 315 -NLNDVKAVRLETGKTKR---DIMISGLGFITIDAGAKVI-----------------VRV 353
Query: 514 PKPVEVFVRNPM 525
PK V+V +RN +
Sbjct: 354 PKHVDVILRNSI 365
>gi|23099443|ref|NP_692909.1| GTP-binding protein YqeH [Oceanobacillus iheyensis HTE831]
gi|22777672|dbj|BAC13944.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831]
Length = 366
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 126/388 (32%), Positives = 189/388 (48%), Gaps = 51/388 (13%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QTSE GY P + L K+ VLC RC L H + I V
Sbjct: 6 CQGCGAEIQTSEESEVGYAPPSS--LNKE-----IVLCKRCFRLKHYNEIQDVN------ 52
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
+S D+ + +S +R LIV L+DI D +G+ L + + GANPI+LV K+DL
Sbjct: 53 -----ISDDDFLQMVSSIRDTDGLIVHLIDIFDVDGTLLKSLPRITGANPILLVGNKLDL 107
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK T+ N + +W+ ++ + V + SSK GI + I+ + +DV+I+G+
Sbjct: 108 LPKSTNVNKLKNWLQREASQLGIKVKDIAFISSKKGTGIDSLKQLIETYRGKKDVFIVGT 167
Query: 281 ANVGKSAFINALLKK-MGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS FIN L+++ GE A A+ Y PGTTLG I+I L DTP
Sbjct: 168 TNVGKSTFINKLIEQSTGE---ANAITTSY------FPGTTLGFIEI-PLDERNVLVDTP 217
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ + A V +DL + P ++ + + + + T+F GGL R
Sbjct: 218 GIVNKQQMAHYVSDKDLKTITPNKEIKARVYQLQDQQ--------------TLFIGGLAR 263
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
+D LK ++ + ++ L ++ +KAD Y+ LG L+PP +E L
Sbjct: 264 LDFLKGEKQSFVCYFS-NELSIHRTKLEKADALYEDHLGALLSPP----DSESVNNLPEF 318
Query: 460 RLLEIKFEDTERPASDVAISGLGWISVE 487
K D + +D+ GLGWISV+
Sbjct: 319 VGKTFKLNDEK---TDIVFPGLGWISVQ 343
>gi|404417968|ref|ZP_10999750.1| GTPase YqeH [Staphylococcus arlettae CVD059]
gi|403489684|gb|EJY95247.1| GTPase YqeH [Staphylococcus arlettae CVD059]
Length = 368
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 130/427 (30%), Positives = 213/427 (49%), Gaps = 70/427 (16%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFK-TVLCGRCRLLSHGHMITAVGGNGGY 159
C GCGAPLQ+ +A GYV +H+ F+ V+C RC L + + + VG N
Sbjct: 9 CIGCGAPLQSDNPEAAGYV--------PEHNLFREDVICKRCFRLKNYNEVQDVGMN--- 57
Query: 160 AGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVD 219
+D+ L+ L +K +IV +VD+ DF GSF+ ++ + G +ILV K+D
Sbjct: 58 --------SDDFLNLLNGLTDKKGIIVNVVDVFDFEGSFINALKRIVGNKKVILVANKLD 109
Query: 220 LLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILG 279
LLPK + V +W+ + K L +V L S++ GI + I+ + +DVYI+G
Sbjct: 110 LLPKQINKRRVTEWLKKTARKYGLEAETVVLISAEKGWGIDDLMQAIESHRNQQDVYIVG 169
Query: 280 SANVGKSAFINALLKK-MGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDT 338
+ NVGKS IN L+++ +GE+D S PGTTL I I ++DT
Sbjct: 170 TTNVGKSTLINKLIEQSVGEKDTVTT---------SRFPGTTLDMIDI-PLDETSFMFDT 219
Query: 339 PGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLV 398
PG+ H+ V ++L + P++ ++ + + + NE G T+F+GGL
Sbjct: 220 PGIIQEHQITHFVSDKELKTIMPKNEVKQRVYQL-------NE-------GQTLFFGGLA 265
Query: 399 RIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDR 458
RID + V + L Y +L+++ T+KA++ ++ +LG LTPP + D
Sbjct: 266 RIDYV-VGGKRPLICYFSNNLKIHRTKTEKANDLWRNQLGSVLTPPSDPTQ------FDL 318
Query: 459 ERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVE 518
+ + ++ E T + DV I+GLG+I+++ + I V VPK V+
Sbjct: 319 DNVKAVRLE-TGKEKRDVMIAGLGFITIDAGAKVI-----------------VRVPKNVD 360
Query: 519 VFVRNPM 525
V +RN +
Sbjct: 361 VILRNSI 367
>gi|385265566|ref|ZP_10043653.1| hypothetical protein MY7_2332 [Bacillus sp. 5B6]
gi|385150062|gb|EIF13999.1| hypothetical protein MY7_2332 [Bacillus sp. 5B6]
Length = 366
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 130/425 (30%), Positives = 190/425 (44%), Gaps = 65/425 (15%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG +QT + GY K + V+C RC L + + I V
Sbjct: 6 CIGCGVTIQTEDKQGLGYA-------PKASLTKENVICQRCFRLKNYNEIQDVS------ 52
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ L + +LIVK+VDI DFNGS++ + G NPIILV K D+
Sbjct: 53 -----LTDDDFLNILHTIGDTDSLIVKVVDIFDFNGSWINGLNRFVGGNPIILVGNKADI 107
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W+ + L L V L S+ G+ V I+ ++ RDVY++G
Sbjct: 108 LPKSVKRERLVQWMKREAKEYGLKPLDVFLISASRGQGMKEVIDAIEHYREDRDVYVVGC 167
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS FIN ++K++ + +Q PGTTL I+I G LYDTPG
Sbjct: 168 TNVGKSTFINRIIKEVSGEENIITTSQ--------FPGTTLDAIEI-PLDDGSALYDTPG 218
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ HH+ A V DL L P+ L+ ++F + NE + T+++GGL R
Sbjct: 219 IINHHQMAHYVDKRDLKVLTPKKELKPRTFQL-------NEKQ-------TLYFGGLARF 264
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D + +T Y P L ++ + AD Y+K G LTPP G LD
Sbjct: 265 DYVSG-DKTAFVCYMPNELMIHRTKLENADALYEKHAGELLTPP-------GKDHLDEFP 316
Query: 461 LLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVEVF 520
L+ + +D+ SGLGW++V+ + I + PK V VF
Sbjct: 317 ELQPHTFSIKEGKTDIVFSGLGWVTVQQADKKI----------------TAYAPKGVHVF 360
Query: 521 VRNPM 525
VR +
Sbjct: 361 VRRSL 365
>gi|452975135|gb|EME74954.1| GTPase YqeH [Bacillus sonorensis L12]
Length = 366
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 131/426 (30%), Positives = 195/426 (45%), Gaps = 67/426 (15%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG +QT + GY P+ LK V+C RC L + + I V
Sbjct: 6 CIGCGVAIQTENKNELGYA-PEASLLKDD------VICQRCFRLKNYNEIQDVS------ 52
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ + L + +LIVK+VDI DFNGS++ + G NPI+L+ K D+
Sbjct: 53 -----LTDDDFLKILHGIGETDSLIVKIVDIFDFNGSWINGLNRFVGGNPILLIGNKADI 107
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W+ + L + V L S+ G+ I+ + G+DVY++G
Sbjct: 108 LPKSVKRERLVHWMKREAKELGLKPVDVLLVSAGRGQGMKEAIEAIEHYRHGKDVYVVGC 167
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS FIN ++K++ GE D S PGTTL I+I G +YDTP
Sbjct: 168 TNVGKSTFINRIIKEVSGEGDIITT---------SQYPGTTLDAIEI-PLDDGSSMYDTP 217
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ HH+ A V DL L P+ L+ ++F + NE + T+F+GGL R
Sbjct: 218 GIINHHQMAHYVAKRDLKILTPKKELKPRNFQL-------NEQQ-------TLFFGGLSR 263
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + Y P L ++ + ADE Y+K G L PP K++ + + L +
Sbjct: 264 FDYISG-GRSSFVCYMPNELNIHRTKLENADELYEKHAGELLAPP-AKEELDTFPELVKH 321
Query: 460 RLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVEV 519
+ P +DV SGLGW++V+ + I H PK V V
Sbjct: 322 TFT------IKEPKTDVVFSGLGWVTVQGANQRI----------------VAHAPKGVHV 359
Query: 520 FVRNPM 525
FVR +
Sbjct: 360 FVRRSL 365
>gi|196248991|ref|ZP_03147691.1| Nitric-oxide synthase [Geobacillus sp. G11MC16]
gi|196211867|gb|EDY06626.1| Nitric-oxide synthase [Geobacillus sp. G11MC16]
Length = 369
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 133/425 (31%), Positives = 195/425 (45%), Gaps = 63/425 (14%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +Q + GY E + + ++C RC L H + + V
Sbjct: 7 CIGCGAAIQFEDPKKAGYAPKSVLE-----KETEEIICQRCFRLKHYNEVQDVP------ 55
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
+ ++ L + KAL+V +VDI DFNGS++ + A NPI+LV K DL
Sbjct: 56 -----LDDNDFLHMLHRIGESKALVVYIVDIFDFNGSWIPGLPRFAVNNPILLVGNKADL 110
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LP+ + + W+ + L + V L S+ G+ GV I + ++GRDVY++G
Sbjct: 111 LPRSVKYPKLLQWMRRMAEELGLCPIDVRLVSAAKGIGMTGVMETIDRYREGRDVYVVGC 170
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS FIN ++K+ A + S PGTTL I+I GG LYDTPG
Sbjct: 171 TNVGKSTFINRIIKE--------ATGKGNVITTSYFPGTTLDMIEI-PLEGGASLYDTPG 221
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ HH+ A V A DL + P+ + + + + NE G T+F+GGL R+
Sbjct: 222 IINHHQMAHFVDARDLKIITPKREIHPRVYQL-------NE-------GQTLFFGGLARL 267
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D +K Y L ++ +KAD Y +LG L PP K+ A+ + L R
Sbjct: 268 DYVKG-GRRSFVCYVANDLTIHRTKLEKADSLYANQLGSLLAPP-SKRYADEFPPL-VSR 324
Query: 461 LLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVEVF 520
L +K ER D+ SGLGW++ L VH PK V+VF
Sbjct: 325 PLSVK----ER-KMDIVFSGLGWVT----------------CNDPGAQLVVHAPKGVDVF 363
Query: 521 VRNPM 525
+R +
Sbjct: 364 IRQSL 368
>gi|242242875|ref|ZP_04797320.1| GTP-binding protein [Staphylococcus epidermidis W23144]
gi|418615653|ref|ZP_13178592.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU118]
gi|418633478|ref|ZP_13195891.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU129]
gi|420174637|ref|ZP_14681086.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM061]
gi|420190211|ref|ZP_14696155.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM037]
gi|420192348|ref|ZP_14698208.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM023]
gi|420204515|ref|ZP_14710073.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM015]
gi|242233650|gb|EES35962.1| GTP-binding protein [Staphylococcus epidermidis W23144]
gi|374816703|gb|EHR80902.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU118]
gi|374839231|gb|EHS02749.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU129]
gi|394244868|gb|EJD90200.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM061]
gi|394259102|gb|EJE03972.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM037]
gi|394261559|gb|EJE06356.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM023]
gi|394273525|gb|EJE17956.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM015]
Length = 366
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 130/432 (30%), Positives = 213/432 (49%), Gaps = 70/432 (16%)
Query: 96 SAVASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFK-TVLCGRCRLLSHGHMITAVG 154
+ + C GCGAPLQ+ DAPGYV +H+ F+ V+C RC L + + + VG
Sbjct: 2 NEILKCIGCGAPLQSENKDAPGYV--------PEHNMFREDVICRRCFRLKNYNEVQDVG 53
Query: 155 GNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILV 214
+ +++ L+ L +K +IV +VD+ DF GSF+ I+ + G IILV
Sbjct: 54 -----------MESEDFLNLLTGLSEKKGIIVNVVDVFDFEGSFINAIQRIVGNKKIILV 102
Query: 215 VTKVDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRD 274
K+DLLPK + V +W+ ++ K L V L S+ GI + I + D
Sbjct: 103 ANKIDLLPKQINHRRVKEWLRKSARKYGLEAEDVVLISANKGWGIDELLQSINHVRNKDD 162
Query: 275 VYILGSANVGKSAFINALLKK-MGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGG 333
VYI+G+ NVGKS IN L+++ +GE+D S PGTTL I I
Sbjct: 163 VYIVGTTNVGKSTLINKLIEQSVGEKDVVTT---------SRFPGTTLDMIDI-PLDEKS 212
Query: 334 KLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIF 393
++DTPG+ H+ V +L + P++ ++ + + + NE + T+F
Sbjct: 213 FMFDTPGIIQSHQMTNYVSENELKIIIPKNEVKQRVYQL-------NEKQ-------TLF 258
Query: 394 WGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGW 453
+GGL RID + + F+ L ++ T+KA++ ++ +LG L+PP Q A+ +
Sbjct: 259 FGGLARIDYVSGGKRPLVCFFS-NDLNIHRTKTEKANDLWKSQLGALLSPP---QDAQQF 314
Query: 454 KGLDRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHV 513
L+ + + ++ T+R D+ ISGLG+I+++ + I V V
Sbjct: 315 -NLNDVKAVRLETGKTKR---DIMISGLGFITIDAGAKVI-----------------VRV 353
Query: 514 PKPVEVFVRNPM 525
PK V+V +RN +
Sbjct: 354 PKHVDVILRNSI 365
>gi|414160964|ref|ZP_11417227.1| ribosome biogenesis GTPase YqeH [Staphylococcus simulans
ACS-120-V-Sch1]
gi|410876643|gb|EKS24541.1| ribosome biogenesis GTPase YqeH [Staphylococcus simulans
ACS-120-V-Sch1]
Length = 365
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 132/428 (30%), Positives = 204/428 (47%), Gaps = 72/428 (16%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA LQ + PGYV + L K+ V+C RC L + + I VG
Sbjct: 6 CIGCGATLQADDPKKPGYVP--AHNLHKE-----DVICQRCFRLKNYNEIQDVG------ 52
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
+ + + + L+HL +K L+V +VDI DF GSF+ ++ + G +IL K+DL
Sbjct: 53 -----MDSQDFLDLLNHLADKKGLVVNVVDIFDFEGSFINALKRIVGNKKVILAANKIDL 107
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + V DW+ ++ K L V L S++ GI + IQ+ +K DVYI+G+
Sbjct: 108 LPKQINKRRVKDWLKKSARKYGLEAEDVVLISAEKGYGIQDLLEAIQQHRKQEDVYIVGT 167
Query: 281 ANVGKSAFINALLKK-MGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS IN L+++ +GE++ S PGTTL I I +YDTP
Sbjct: 168 TNVGKSTLINKLIEQSVGEKNVVTT---------SRFPGTTLDLIDI-PLDDHSFMYDTP 217
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
GV H+ V ++L + P ++ + + + E T+F+GGL R
Sbjct: 218 GVIQDHQMTHYVSEKELKQIMPNKEVKQRVYQLNEEQ--------------TLFFGGLAR 263
Query: 400 IDLLK--VLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLD 457
ID + P C Y +L ++ T+KA+E ++ +LG L PP K +
Sbjct: 264 IDYVSGGKRPLVC---YFSNNLPIHRTKTEKANELWRTQLGKLLAPPSNKD------DFN 314
Query: 458 RERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPV 517
+ + ++ E T + DV I+GLG+I++ P + I V VPK V
Sbjct: 315 LDEMKAVRLE-TGKEKRDVMIAGLGFITIGPGAKVI-----------------VRVPKSV 356
Query: 518 EVFVRNPM 525
+V +RN +
Sbjct: 357 DVVLRNSI 364
>gi|420206085|ref|ZP_14711595.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM008]
gi|394277924|gb|EJE22241.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM008]
Length = 366
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 130/432 (30%), Positives = 213/432 (49%), Gaps = 70/432 (16%)
Query: 96 SAVASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFK-TVLCGRCRLLSHGHMITAVG 154
+ + C GCGAPLQ+ DAPGYV +H+ F+ V+C RC L + + + VG
Sbjct: 2 NEILKCIGCGAPLQSENKDAPGYV--------PEHNMFREDVICRRCFRLKNYNEVQDVG 53
Query: 155 GNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILV 214
+ +++ L+ L +K +IV +VD+ DF GSF+ I+ + G IILV
Sbjct: 54 -----------MESEDFLNLLTGLSEKKGIIVNVVDVFDFEGSFINAIQRIVGNKKIILV 102
Query: 215 VTKVDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRD 274
K+DLLPK + V +W+ ++ K L V L S+ GI + I + D
Sbjct: 103 ANKIDLLPKQINHRRVKEWLRKSARKYGLEAEDVVLISANKGWGIDELLQSINHVRNKDD 162
Query: 275 VYILGSANVGKSAFINALLKK-MGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGG 333
VYI+G+ NVGKS IN L+++ +GE+D S PGTTL I I
Sbjct: 163 VYIVGTTNVGKSTLINKLIEQSVGEKDVVTT---------SRFPGTTLDMIDI-PLDEKS 212
Query: 334 KLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIF 393
++DTPG+ H+ V +L + P++ ++ + + + NE + T+F
Sbjct: 213 FMFDTPGIIQSHQMTNYVSENELKIIIPKNEIKQRVYQL-------NEKQ-------TLF 258
Query: 394 WGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGW 453
+GGL RID + + F+ L ++ T+KA++ ++ +LG L+PP Q A+ +
Sbjct: 259 FGGLARIDYVSGGKRPLVCFFS-NDLNIHRTKTEKANDLWKAQLGALLSPP---QDAQQF 314
Query: 454 KGLDRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHV 513
L+ + + ++ T+R D+ ISGLG+I+++ + I V V
Sbjct: 315 -NLNDVKAVRLETGKTKR---DIMISGLGFITIDAGAKVI-----------------VRV 353
Query: 514 PKPVEVFVRNPM 525
PK V+V +RN +
Sbjct: 354 PKHVDVILRNSI 365
>gi|403237575|ref|ZP_10916161.1| GTPase YqeH [Bacillus sp. 10403023]
Length = 369
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 130/428 (30%), Positives = 199/428 (46%), Gaps = 68/428 (15%)
Query: 100 SCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGY 159
SC GCG +QT++ GY P E K V+C RC L H + + V
Sbjct: 7 SCIGCGVEIQTADKTKLGYAPPSALEKDK-------VICQRCFKLKHYNEVQDVS----- 54
Query: 160 AGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVD 219
++ D+ + L + +LIVK+VDI DFNGS+L + G N I+LV KVD
Sbjct: 55 ------LTDDDFLKILHGIGSTNSLIVKIVDIFDFNGSWLPGLHRFVGDNTILLVGNKVD 108
Query: 220 LLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILG 279
LLPK + +W+ E++ + L + V L S++ GI VA I+ + G+DVY++G
Sbjct: 109 LLPKSVKQKKLINWMKESSRELGLKPVDVFLISAEKGTGIKEVAEAIEHYRFGKDVYVVG 168
Query: 280 SANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDT 338
NVGKS FIN L+K+ GE++ S PGTTL I I L+DT
Sbjct: 169 CTNVGKSTFINRLIKEFSGEKEDFITT--------SHFPGTTLDIIDI-PLDEEHSLFDT 219
Query: 339 PGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLV 398
PG+ HH+ A V +DL + P+ ++ + F + + T+F+GGL
Sbjct: 220 PGIINHHQMAHFVSKQDLKVITPKKEIKPKVFQLNEQQ--------------TLFFGGLA 265
Query: 399 RIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDR 458
R D + ++ + + L ++ + ADE YQ G L PP G+ + + + L
Sbjct: 266 RFDFVTGNRQSFVCHFS-NLLNIHRTKLENADELYQNHKGELLNPP-GESELDEFPPLIA 323
Query: 459 ERLLEIKFEDTERPASDVAISGLGWISV-EPVRRSIRNSDINLESTSGELHLAVHVPKPV 517
+ + +D+ SGLGW+++ EP + + HVPK V
Sbjct: 324 HEFM------IKEAKTDIVFSGLGWVTINEPQTK-----------------IVAHVPKGV 360
Query: 518 EVFVRNPM 525
V VR +
Sbjct: 361 GVMVRKSL 368
>gi|390453028|ref|ZP_10238556.1| hypothetical protein PpeoK3_03290 [Paenibacillus peoriae KCTC 3763]
Length = 375
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 130/422 (30%), Positives = 207/422 (49%), Gaps = 63/422 (14%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG +QT+ + PGY+ +K + V+C RC + + + ++V
Sbjct: 13 CSGCGITMQTTSPELPGYI-------PEKLLTREPVICQRCFRIKNYNETSSVA------ 59
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
V DE + LS + + AL++ +VDI DF GS ++ ++ G+NP+IL V K DL
Sbjct: 60 -----VDQDEFLKLLSQIGDKDALVIHIVDIFDFEGSLISGLQRFVGSNPVILAVNKTDL 114
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK T++N V +WV + ++ L + L S+K G + + + + RDVY++G+
Sbjct: 115 LPKVTNWNKVRNWVQKQAKEQGLRTADIVLCSAKKNQGFDRLLDVVSELRGNRDVYVVGA 174
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS IN L++ + M Q+ S PGTTL + I G + DTPG
Sbjct: 175 TNVGKSTLINRLIRDYSD------MEQEL--TTSRYPGTTLDMVNI-PLDDGKHIIDTPG 225
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ R + +V +DL A+ P L+ ++ + +F G T+F+GG+ R
Sbjct: 226 IVYPWRFSEIVSRQDLSAIMPDKPLKPAAYQL--------DF------GQTLFFGGMGRF 271
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D ++ ++ T Y L+++ ++AD+ + G L+PP Q AE + E
Sbjct: 272 DFIEGQHQS-FTCYINGGLKIHRTKLERADQLFADHAGELLSPPTRDQLAEMPEWTRHE- 329
Query: 461 LLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVEVF 520
F + SD+ ISGLGWI V NSD SG L +AVHVP+ + V
Sbjct: 330 -----FRVPRKTPSDIYISGLGWIRV--------NSD------SGAL-VAVHVPRGIRVL 369
Query: 521 VR 522
+R
Sbjct: 370 LR 371
>gi|399046901|ref|ZP_10739089.1| ribosome biogenesis GTPase YqeH [Brevibacillus sp. CF112]
gi|433545543|ref|ZP_20501896.1| GTPase YqeH [Brevibacillus agri BAB-2500]
gi|398055051|gb|EJL47143.1| ribosome biogenesis GTPase YqeH [Brevibacillus sp. CF112]
gi|432183198|gb|ELK40746.1| GTPase YqeH [Brevibacillus agri BAB-2500]
Length = 373
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 128/427 (29%), Positives = 203/427 (47%), Gaps = 61/427 (14%)
Query: 96 SAVASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGG 155
+ +C GCG LQT ++ PGY P++ +K V+C RC + H + + V
Sbjct: 4 QTIGTCAGCGIALQTEDAKKPGYA-PESALGRK------VVICQRCYRIKHYNEVAPVA- 55
Query: 156 NGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVV 215
+ D+ + L + ++L+V +VDI DF GS+L + G NPI+LV
Sbjct: 56 ----------MGDDDFLKILDGIGSTQSLVVMVVDIFDFQGSWLRGLPRFVGNNPILLVG 105
Query: 216 TKVDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDV 275
KVDLLP+ + N V +W+ ++ L + L S++ I + + I + +KGRDV
Sbjct: 106 NKVDLLPRNINLNRVRNWMQHEAKERGLRPEDIVLISAQKGQHIDELLNRIGELRKGRDV 165
Query: 276 YILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKL 335
YI+G NVGKS IN +L G AA + P PGTTL I+I G +
Sbjct: 166 YIVGVTNVGKSTMINRILHDYG----AAELTITTSPF----PGTTLDKIEI-PLEDGRSI 216
Query: 336 YDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWG 395
+DTPG+ + ++ DL + P+SR+ + + + +G T+F G
Sbjct: 217 FDTPGIINRDQIGHMISPSDLRKITPKSRINSKVYQL--------------EDGQTLFLG 262
Query: 396 GLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKG 455
GL RID ++ P+ Y L ++ +KADE QK G L PP G++ A+
Sbjct: 263 GLARIDFVRG-PKQPFVVYVDNDLYIHRTKLEKADEVLQKHHGTLLVPPTGEEAAKALPP 321
Query: 456 LDRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPK 515
+ K + ++ P +D+ ISGLGW++++ E ++ VH PK
Sbjct: 322 FVKH---SFKVKQSQIP-TDIVISGLGWVTIQ---------------GKYEANVVVHAPK 362
Query: 516 PVEVFVR 522
V V +R
Sbjct: 363 GVSVGMR 369
>gi|311031591|ref|ZP_07709681.1| GTP-binding protein YqeH [Bacillus sp. m3-13]
Length = 367
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 135/427 (31%), Positives = 200/427 (46%), Gaps = 69/427 (16%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
CYGCG +QT + GY P + L K+ V+C RC L H + I V
Sbjct: 7 CYGCGVAIQTENPEGLGYAPPSS--LNKE-----AVICKRCFRLKHYNEIQDVS------ 53
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ L+ + + + L+VK+VDI DF+GS+L + G N ++LV KVDL
Sbjct: 54 -----LTDDDFIRILNSIGQTQGLVVKIVDIFDFDGSWLPGLHRFVGNNKVLLVGNKVDL 108
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK N V +W+ +A + L V L S+ G+ +A I+ + G+DVY++G
Sbjct: 109 LPKSVKPNKVINWMKQAAKELGLKPEDVFLISADKGTGVKELAQAIEDYRDGKDVYVVGC 168
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS FIN ++++ GE D S PGTTL I I G L+DTP
Sbjct: 169 TNVGKSTFINRIIREFSGEEDVITT---------SQFPGTTLDMIDI-PLDNGASLFDTP 218
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + +L ++P+ ++ + F + NE G T+F+GGL R
Sbjct: 219 GIINRHQMAHFIDKTELKVISPKKEIKPKIFQL-------NE-------GQTLFFGGLAR 264
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D +K T Y L ++ + AD Y++ LG L PP G+ E + L
Sbjct: 265 FDYVKG-GRNSFTCYVSNDLYIHRTKLENADNVYKEHLGDLLQPP-GQDVVESFPELVAH 322
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV-EPVRRSIRNSDINLESTSGELHLAVHVPKPVE 518
IK E T D+ SGLGW+++ EP + + HVPK V
Sbjct: 323 E-FTIKEEKT-----DIVFSGLGWVTINEP-----------------GIKVVAHVPKGVG 359
Query: 519 VFVRNPM 525
V VR +
Sbjct: 360 VMVRKSL 366
>gi|347534308|ref|YP_004840978.1| hypothetical protein LSA_06230 [Lactobacillus sanfranciscensis TMW
1.1304]
gi|345504364|gb|AEN99046.1| Uncharacterized protein yqeH [Lactobacillus sanfranciscensis TMW
1.1304]
Length = 368
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 128/386 (33%), Positives = 186/386 (48%), Gaps = 48/386 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +Q ++ D GY E K + + C RC L H + I V
Sbjct: 8 CIGCGALIQDTDKDKAGYTPKSAIE---KGLESGELYCQRCFRLRHYNEIQPVD------ 58
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
VS DE L + +L+V +VDI D NGS + I+ G NPI++V KVDL
Sbjct: 59 -----VSDDEFLHLLGKIGDTDSLVVYVVDIFDVNGSIIPGIQRFVGNNPILVVGNKVDL 113
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LP + + DW+ + K + + + L S+K+ + + I+K +K RDVY++G
Sbjct: 114 LPSSFKESKIKDWLRQMMNKAGIKPIDIELVSAKTNRSVDDLLEVIKKYQKNRDVYVVGV 173
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS IN ++ + A Q+ S PGTTL I+I G L DTPG
Sbjct: 174 TNVGKSTLINQIIHQ--------ASGQEQVITTSKFPGTTLDMIKI-PLDDGHDLIDTPG 224
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
V + A + +DL ++PQ R++ + + + +G T+F G + R
Sbjct: 225 VIHASQMAHYLSPKDLKYVSPQKRIKPKVYQL--------------NDGQTLFLGAIGRF 270
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D +K P+T T Y +L ++ T+ ADEF+ K G L PP+GK E L R
Sbjct: 271 DYVKG-PKTGFTVYVDNNLMIHRTKTENADEFFDKHAGELLNPPLGK---ENVVPLQRH- 325
Query: 461 LLEIKFEDTERPASDVAISGLGWISV 486
E K EDT SD+ I GLGW++V
Sbjct: 326 --EFKVEDT----SDLVIEGLGWVTV 345
>gi|322388976|ref|ZP_08062546.1| GTP-binding protein [Streptococcus parasanguinis ATCC 903]
gi|321144281|gb|EFX39689.1| GTP-binding protein [Streptococcus parasanguinis ATCC 903]
Length = 368
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 130/426 (30%), Positives = 206/426 (48%), Gaps = 65/426 (15%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGAP+QT + GY E K + V C RC L H + IT V
Sbjct: 6 CIGCGAPIQTENKEGLGYTPQSALE---KGLETGEVYCQRCFRLRHYNEITDV------- 55
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ + L + AL+V +VDI DFNGS + + N ++LV K D+
Sbjct: 56 ----HLTDDDFLKLLHEVGDSDALVVNVVDIFDFNGSVIPGLPRFVAGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + V W++E ++ + + V LTS+++ + I + +I++ +KGRDVY++G
Sbjct: 112 LPKSVKDSKVTHWLMERAHEEGMRPVDVVLTSAQNKSAIKDLMEKIEQHRKGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G++D S PGTTL I+I G +YDTP
Sbjct: 172 TNVGKSTLINAIIQEITGDKDIITT---------SRFPGTTLDKIEI-PLDDGSYIYDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + A++L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLTAKNLKYVSPKKEIKPKTYQLNPEQ--------------TLFLGGLGR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D +K + F+ L+++ + A FY K +G LTPP K+K E + L
Sbjct: 268 FDFIKGEKQGFTAFFD-NELKLHRTKLEGATAFYDKHVGSLLTPPNSKEKEE-FPPL--- 322
Query: 460 RLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVEV 519
+ E T + +D+ ISGLGWI V +GE +AV P+ V V
Sbjct: 323 ----VSHEFTIKDKTDLVISGLGWIRV-----------------NGEAKVAVWAPEGVAV 361
Query: 520 FVRNPM 525
R +
Sbjct: 362 VTRKAI 367
>gi|427392284|ref|ZP_18886289.1| ribosome biogenesis GTPase YqeH [Alloiococcus otitis ATCC 51267]
gi|425731551|gb|EKU94367.1| ribosome biogenesis GTPase YqeH [Alloiococcus otitis ATCC 51267]
Length = 381
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 134/446 (30%), Positives = 210/446 (47%), Gaps = 73/446 (16%)
Query: 85 RKKKDKVLKVN-SAVASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRL 143
+K +D V N V C GCGA LQ+ + + PGY+ E + + + C RC
Sbjct: 3 KKGQDTVNHENPDEVIYCIGCGAQLQSQDPNQPGYLPQSALEGRSEDDLY----CKRCFR 58
Query: 144 LSHGHMITAVGGNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIR 203
L H + + V V++D+ L + +E+AL+V +VDI+D NGSF+ I
Sbjct: 59 LRHYNELADVQ-----------VTSDDFLNMLGEISQEEALVVNVVDILDVNGSFVPGIG 107
Query: 204 DLAGANPIILVVTKVDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVA 263
L G NP+I+V K DLLPK + W+ E + + L+V L S+ + +
Sbjct: 108 RLTGNNPLIIVGNKFDLLPKSLKRGKLRQWLEEVSYDMGVKPLAVDLISAVRQGSVAHLL 167
Query: 264 SEIQKEKKGRDVYILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGP 323
I + + RDVYI+G+ NVGKS IN ++ + + S PGTTLG
Sbjct: 168 DLINEYRGDRDVYIVGTTNVGKSTLINQIINLASQEEDVVTT--------SYFPGTTLGK 219
Query: 324 IQIDAFLGGGKLYDTPGVHLHHRQAAVVHA---EDLPALAPQSRLRGQSFAVISETETNN 380
I+I G KL DTPG+ R VVH +++ + P+ L+ +++
Sbjct: 220 IEI-PLDDGHKLVDTPGI---FRPGQVVHQLNPQEVKTVIPRKELKPRTYQ--------- 266
Query: 381 EFKSHGLN-GFTIFWGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGV 439
LN G ++F GGL R D ++ + + Y SL ++ +KAD+ YQ +LG
Sbjct: 267 ------LNPGQSLFIGGLGRFDYVQGPGKASIVVYAAPSLSIHRTKREKADDLYQSQLGK 320
Query: 440 TLTPPIGKQKAEGWKGLDRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDIN 499
LTPP + D++ L + F+ + ASD+ SGLGW+ I S +
Sbjct: 321 DLTPPFDSK--------DKKTLTKRTFKVDQ--ASDLVYSGLGWV-------KINASGVE 363
Query: 500 LESTSGELHLAVHVPKPVEVFVRNPM 525
+E H+ + ++F+R PM
Sbjct: 364 VEG---------HIIQGADIFIRKPM 380
>gi|389815855|ref|ZP_10207103.1| GTPase YqeH [Planococcus antarcticus DSM 14505]
gi|388465578|gb|EIM07894.1| GTPase YqeH [Planococcus antarcticus DSM 14505]
Length = 367
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 128/427 (29%), Positives = 194/427 (45%), Gaps = 65/427 (15%)
Query: 96 SAVASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGG 155
S + +C GCG +QT D GY P + E ++ ++C RC L + + + V
Sbjct: 2 SEMPTCIGCGVQIQTENKDEIGYAPPSSLEKEE-------IICQRCFRLKNYNELQPVS- 53
Query: 156 NGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVV 215
++ D+ L+ L LIVK+VDI DFNGS+L + G N I+L+
Sbjct: 54 ----------LTDDDFLRILNGLGERDGLIVKIVDIFDFNGSWLPGLHRFVGNNDILLIA 103
Query: 216 TKVDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDV 275
K DLLPK + + W+ + K L + + S+ GI I+K +KG+DV
Sbjct: 104 NKADLLPKSVKQHKLIHWMKQEARKLGLQPIDILTVSAHKGTGIPEAMEAIEKYRKGKDV 163
Query: 276 YILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKL 335
Y++G NVGKS FIN ++K+ A Q S PGTTL I+I L
Sbjct: 164 YVVGCTNVGKSTFINRVIKQ--------ATGQADVITTSHFPGTTLDMIEI-PLDDKRSL 214
Query: 336 YDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWG 395
+DTPG+ HH+ A + DL + P+ ++ + F + +E T+F G
Sbjct: 215 FDTPGIINHHQLAHHLQTADLKQIMPKKEIKPRVFQLNAEQ--------------TLFIG 260
Query: 396 GLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKG 455
GL R D ++ + T + L ++ D AD Y++ LG L PP + K
Sbjct: 261 GLARFDFIQG-ERSSFTVHIANDLPIHRTKLDNADALYEQHLGDMLAPPSAEYKD----- 314
Query: 456 LDRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPK 515
D L+ +F E +D+ SGLGWI+++ G +A H PK
Sbjct: 315 -DFPELVRHEFSIKE-AKTDIVFSGLGWITIQ----------------HGNAVIAAHAPK 356
Query: 516 PVEVFVR 522
VEV +R
Sbjct: 357 GVEVLLR 363
>gi|289550632|ref|YP_003471536.1| GTP-binding protein YqeH, possibly involved in replication
initiation [Staphylococcus lugdunensis HKU09-01]
gi|385784260|ref|YP_005760433.1| putative GTPase [Staphylococcus lugdunensis N920143]
gi|418413936|ref|ZP_12987152.1| ribosome biogenesis GTPase YqeH [Staphylococcus lugdunensis
ACS-027-V-Sch2]
gi|289180164|gb|ADC87409.1| GTP-binding protein YqeH, possibly involved in replication
initiation [Staphylococcus lugdunensis HKU09-01]
gi|339894516|emb|CCB53797.1| putative GTPase [Staphylococcus lugdunensis N920143]
gi|410877574|gb|EKS25466.1| ribosome biogenesis GTPase YqeH [Staphylococcus lugdunensis
ACS-027-V-Sch2]
Length = 366
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 127/427 (29%), Positives = 207/427 (48%), Gaps = 70/427 (16%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFK-TVLCGRCRLLSHGHMITAVGGNGGY 159
C GCGAPLQ+ +APGYV +H+ F+ V+C RC L + + + VG
Sbjct: 7 CIGCGAPLQSENKNAPGYV--------PEHNLFREDVICRRCFRLKNYNEVQDVG----- 53
Query: 160 AGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVD 219
+ +++ L+ L +IV +VDI DF GSF+ ++ + G IILV K+D
Sbjct: 54 ------MDSEDFLNLLNGLSDRSGIIVNVVDIFDFEGSFINALKRIVGNKKIILVANKLD 107
Query: 220 LLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILG 279
LLPK + V +W+ + K L V L S++ GI + + I + + DVYI+G
Sbjct: 108 LLPKQINHRRVKEWLKRSAKKYGLEAEEVVLISAEKGWGIEDLLTAINQNRDHEDVYIVG 167
Query: 280 SANVGKSAFINALLK-KMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDT 338
+ NVGKS IN L++ +GE+D S PGTTL I I +YDT
Sbjct: 168 TTNVGKSTLINKLIELSVGEKDVVTT---------SRFPGTTLDMIDI-PLDETSFMYDT 217
Query: 339 PGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLV 398
PG+ H+ +V ++L + P+ ++ + + ++E++ T+F+GGL
Sbjct: 218 PGIIQEHQMTHLVTEKELKTIIPKKEIKQRVYQ-LNESQ-------------TLFFGGLA 263
Query: 399 RIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDR 458
RID + + F+ L ++ T+KA+E ++ +LG LTPP +
Sbjct: 264 RIDYVSGGKRPLICFFS-NDLNIHRTKTEKANELWKNQLGDLLTPP------NNVSNFNL 316
Query: 459 ERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVE 518
+ + ++ E T + D+ ISGLG+I+++ + I V VPK V+
Sbjct: 317 KDIKAVRLE-TGKEKRDIMISGLGFITIDSGAKVI-----------------VRVPKNVD 358
Query: 519 VFVRNPM 525
V +RN +
Sbjct: 359 VVLRNSI 365
>gi|335040462|ref|ZP_08533590.1| ribosome biogenesis GTPase YqeH [Caldalkalibacillus thermarum
TA2.A1]
gi|334179651|gb|EGL82288.1| ribosome biogenesis GTPase YqeH [Caldalkalibacillus thermarum
TA2.A1]
Length = 365
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 125/388 (32%), Positives = 185/388 (47%), Gaps = 51/388 (13%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG LQ+ PGYV E ++ V+C RC + H + +T V
Sbjct: 5 CTGCGVKLQSENPGQPGYVPVSALEREQ-------VICQRCFRIKHYNDLTPVP------ 51
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
+ DE L + +AL+VK+VD+ DFNGS+L + NP++LVV K DL
Sbjct: 52 -----MDNDEFIHILHRIGEARALVVKIVDLFDFNGSWLPGLMRFVNFNPVVLVVNKTDL 106
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
P+ ++ + WV + L + V S++ GI + I++ ++G DVY++G+
Sbjct: 107 FPR-VNWVRIEQWVRRQAKEGGLKPVDVVFCSAEKGTGIQALMKSIEQHRQGGDVYVVGA 165
Query: 281 ANVGKSAFINALLKKMG-ERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS IN +LK+ G E+ P S PGTTL I+I G LYDTP
Sbjct: 166 TNVGKSTLINQILKQAGAEKAPVLTT--------SRFPGTTLDMIKI-PLDDGQALYDTP 216
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
GV H+ A V +EDL + P L+ + + + T+F+GGL R
Sbjct: 217 GVINDHQMAHYVASEDLKVILPNKPLKPKVYQLNPRQ--------------TLFFGGLAR 262
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
+D ++ Y L V+ +KADE Y K LG L+PP G + + W LD+
Sbjct: 263 LDFASGERQS-FVCYMSNELPVHRTKLEKADELYSKHLGGMLSPP-GNESLKEWGPLDQH 320
Query: 460 RLLEIKFEDTERPASDVAISGLGWISVE 487
F + P D+ SGLGW++V+
Sbjct: 321 -----TFSLKDEPC-DIVFSGLGWVAVK 342
>gi|319946393|ref|ZP_08020630.1| GTP-binding protein [Streptococcus australis ATCC 700641]
gi|417919967|ref|ZP_12563488.1| ribosome biogenesis GTPase YqeH [Streptococcus australis ATCC
700641]
gi|319747361|gb|EFV99617.1| GTP-binding protein [Streptococcus australis ATCC 700641]
gi|342831523|gb|EGU65839.1| ribosome biogenesis GTPase YqeH [Streptococcus australis ATCC
700641]
Length = 368
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 130/426 (30%), Positives = 206/426 (48%), Gaps = 65/426 (15%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGAP+QT + GY E K + V C RC L H + IT V
Sbjct: 6 CIGCGAPIQTENKEGLGYTPQSALE---KGLEIGEVYCQRCFRLRHYNEITDV------- 55
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ + L + AL+V +VDI DFNGS + + N ++LV K D+
Sbjct: 56 ----HLTDDDFLKLLHEVGDSDALVVNVVDIFDFNGSVIPGLPRFVAGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + V W++E ++ + + V LTS+++ + I + +I++ +KGRDVY++G
Sbjct: 112 LPKSVKDSKVTHWLMERAHEEGMRPVDVVLTSAQNKSAIKDLMEKIEQHRKGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G++D S PGTTL I+I G +YDTP
Sbjct: 172 TNVGKSTLINAIIQEITGDKDIITT---------SRFPGTTLDKIEI-PLDDGSYIYDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + A++L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLTAKNLKYVSPKKEIKPKTYQLNPEQ--------------TLFLGGLGR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D +K + F+ L+++ + A FY K +G LTPP K+K E + L
Sbjct: 268 FDFIKGEKQGFTAFFD-NELKLHRTKLEGATAFYDKHVGGLLTPPNSKEKEE-FPPL--- 322
Query: 460 RLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVEV 519
+ E T + +D+ ISGLGWI V +GE +AV P+ V V
Sbjct: 323 ----VSHEFTIKDKTDLVISGLGWIRV-----------------NGEARVAVWAPEGVAV 361
Query: 520 FVRNPM 525
R +
Sbjct: 362 VSRKAI 367
>gi|319892654|ref|YP_004149529.1| GTP-binding protein YqeH [Staphylococcus pseudintermedius HKU10-03]
gi|317162350|gb|ADV05893.1| GTP-binding protein YqeH, required for biogenesis of 30S ribosome
subunit [Staphylococcus pseudintermedius HKU10-03]
Length = 366
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 134/425 (31%), Positives = 207/425 (48%), Gaps = 72/425 (16%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA LQ+ + PGYV P T L+K+ V+C RC L + + + VG
Sbjct: 7 CIGCGATLQSDDPQKPGYV-PKT-SLEKED-----VICRRCFRLKNYNEVQDVG------ 53
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
+ +D+ + L+ L + ++V LVD+ DF GSF+ ++ + G IILV K+DL
Sbjct: 54 -----MESDDFLKLLNGLSDKPGIVVNLVDVFDFEGSFIHAVKRIVGNKKIILVANKIDL 108
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + V +W+ + L V L S+ GI G+ I+K + G+DVYI+G+
Sbjct: 109 LPKQINKRRVSEWLRRLAKEYGLYPEDVCLISAYKGIGIDGLLQTIEKHRNGQDVYIVGT 168
Query: 281 ANVGKSAFINALLKK-MGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS IN L+++ +GE++ S +PGTTL I I +YDTP
Sbjct: 169 TNVGKSTLINKLIEQTVGEKNVVTT---------SRIPGTTLDMIDI-PIDDNHYMYDTP 218
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ V + L + P+ ++ + + + NE +S +F GGL R
Sbjct: 219 GIIQEHQMTHYVSTKALNTIMPKKEIKQRVYQL-------NEAQS-------LFIGGLAR 264
Query: 400 IDLLK--VLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLD 457
+D LK P C Y L ++ +KADE ++K++G L+PP K + D
Sbjct: 265 VDYLKGGKRPLVC---YFSNELNIHRTKLEKADELWRKQIGTLLSPPSPKDR------FD 315
Query: 458 RERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPV 517
E+L ++ TE D+ ISGLG+++V+ L V VP+ V
Sbjct: 316 FEQLKTVRLT-TENEKKDIMISGLGFVTVD-----------------AGAELQVIVPQNV 357
Query: 518 EVFVR 522
EV +R
Sbjct: 358 EVTLR 362
>gi|347753133|ref|YP_004860698.1| ribosome biogenesis GTPase YqeH [Bacillus coagulans 36D1]
gi|347585651|gb|AEP01918.1| ribosome biogenesis GTPase YqeH [Bacillus coagulans 36D1]
Length = 368
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 131/426 (30%), Positives = 203/426 (47%), Gaps = 67/426 (15%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT + D GY E ++ V+C RC L H + + V
Sbjct: 8 CIGCGALIQTEDPDEAGYAPKSALEKEQ-------VICQRCFRLKHYNEVQDVP------ 54
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ + L+ L + AL+VK+VDI DFNGS+L AG NP++L+ K DL
Sbjct: 55 -----LTDDDFLKILNRLGQVDALVVKIVDIFDFNGSWLPGFHRFAGKNPVLLIGNKEDL 109
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + +W+ + + L + V L S+ G+ + I++ + G+DVY+ G
Sbjct: 110 LPKSVKRAKMANWMKQQAKELGLRPVDVLLVSAAKGHGMDEAMAAIEQYRNGKDVYVAGC 169
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS FIN ++++ A +K S PGTTL I I G LYDTPG
Sbjct: 170 TNVGKSTFINRIIRQ--------ATGEKEVITTSYFPGTTLDMIGI-PLDDGTSLYDTPG 220
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ HH+ A V +L + P+ ++ F + NE + T+F+GGL R+
Sbjct: 221 IINHHQMAHFVGKNELKVITPKKEIKPTVFQL-------NEQQ-------TLFFGGLARL 266
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D +K Y +L+++ + AD+ Y ++LG L PP GK +A + L R
Sbjct: 267 DYIKG-GRRSFVCYVSNALKIHRTKLENADDLYARQLGELLQPP-GKAEAADFPALVRHE 324
Query: 461 LLEIKFEDTERPASDVAISGLGWISV-EPVRRSIRNSDINLESTSGELHLAVHVPKPVEV 519
+ +D+ SGLGW++V EP G + +A +VPK V+V
Sbjct: 325 F------SIKEGKTDIVFSGLGWVTVNEP----------------GAV-VAAYVPKGVQV 361
Query: 520 FVRNPM 525
+R +
Sbjct: 362 MLRQSL 367
>gi|418325685|ref|ZP_12936891.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU071]
gi|365228287|gb|EHM69472.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU071]
Length = 366
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 130/432 (30%), Positives = 214/432 (49%), Gaps = 70/432 (16%)
Query: 96 SAVASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFK-TVLCGRCRLLSHGHMITAVG 154
+ V C GCGAPLQ+ +APGYV +H+ F+ V+C RC L + + + VG
Sbjct: 2 NEVLKCIGCGAPLQSENKEAPGYV--------PEHNMFREDVICRRCFRLKNYNEVQDVG 53
Query: 155 GNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILV 214
+ +++ L+ L +K +IV +VD+ DF GSF+ I+ + G IILV
Sbjct: 54 -----------MESEDFLNLLTGLSEKKGIIVNVVDVFDFEGSFINAIQRIVGNKKIILV 102
Query: 215 VTKVDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRD 274
K+DLLPK + V +W+ ++ K L V L S+ GI + I + D
Sbjct: 103 ANKIDLLPKQINQRRVKEWLRKSARKYGLEAEDVVLISANKGWGIDELLQSINHVRNKDD 162
Query: 275 VYILGSANVGKSAFINALLKK-MGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGG 333
VYI+G+ NVGKS IN L+++ +GE+D S PGTTL I I
Sbjct: 163 VYIVGTTNVGKSTLINKLIEQSVGEKDVVTT---------SRFPGTTLDMIDI-PLDEKS 212
Query: 334 KLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIF 393
++DTPG+ H+ V +L + P++ ++ + + + NE + T+F
Sbjct: 213 FMFDTPGIIQSHQMTNYVSENELKIIIPKNEIKQRVYQL-------NEKQ-------TLF 258
Query: 394 WGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGW 453
+GGL RID + + F+ L ++ T+KA++ ++ +LG L+PP Q+A+ +
Sbjct: 259 FGGLARIDYVSGGKRPLVCFFS-NDLNIHRTKTEKANDLWKSQLGALLSPP---QEAQQF 314
Query: 454 KGLDRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHV 513
L+ + + ++ T+R D+ ISGLG+I+++ + I V V
Sbjct: 315 -NLNDVKAVRLETGKTKR---DIMISGLGFITIDAGAKVI-----------------VRV 353
Query: 514 PKPVEVFVRNPM 525
PK V+V +RN +
Sbjct: 354 PKHVDVILRNSI 365
>gi|384176191|ref|YP_005557576.1| YqeH [Bacillus subtilis subsp. subtilis str. RO-NN-1]
gi|349595415|gb|AEP91602.1| YqeH [Bacillus subtilis subsp. subtilis str. RO-NN-1]
Length = 366
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 133/428 (31%), Positives = 201/428 (46%), Gaps = 71/428 (16%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG +QT + GY P + L K++ V+C RC L + + I V
Sbjct: 6 CIGCGVTIQTEDKTGLGYAPPAS--LTKEN-----VICQRCFRLKNYNEIQDVS------ 52
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ L + +L+VK+VDI DFNGS++ ++ L G NPI+LV K D+
Sbjct: 53 -----LTDDDFLNILHGIGETDSLVVKIVDIFDFNGSWINGLQRLVGGNPILLVGNKADI 107
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W+ + L + V L S+ GI V I+ + G+DVY++G
Sbjct: 108 LPKSLKRERLIQWMKREAKELGLKPVDVFLVSAGRGQGIREVIDAIEHYRNGKDVYVVGC 167
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS FIN ++K++ GE D S PGTTL I+I G LYDTP
Sbjct: 168 TNVGKSTFINRIIKEVSGEEDIITT---------SQFPGTTLDAIEI-PLDDGSSLYDTP 217
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ +H+ A V+ +DL L+P+ L+ ++F + + T+++GGL R
Sbjct: 218 GIINNHQMAHYVNKKDLKILSPKKELKPRTFQLNDQQ--------------TLYFGGLAR 263
Query: 400 IDLL--KVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLD 457
D + + P C Y P L ++ + AD Y+K G LTPP GK + + + L
Sbjct: 264 FDYVSGERSPFIC---YMPNELMIHRTKLENADALYEKHAGELLTPP-GKDEMDEFPEL- 318
Query: 458 RERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPV 517
IK + T D+ SGLGW++V + + + PK V
Sbjct: 319 VAHTFTIKAKKT-----DIVFSGLGWVTVHDADKKV----------------TAYAPKGV 357
Query: 518 EVFVRNPM 525
VFVR +
Sbjct: 358 HVFVRRSL 365
>gi|163790555|ref|ZP_02184984.1| hypothetical protein CAT7_08240 [Carnobacterium sp. AT7]
gi|159874158|gb|EDP68233.1| hypothetical protein CAT7_08240 [Carnobacterium sp. AT7]
Length = 377
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 131/397 (32%), Positives = 197/397 (49%), Gaps = 51/397 (12%)
Query: 95 NSAVASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVG 154
N C GCGA +QT++ +A G+ E K + + C RC L H + I V
Sbjct: 8 NEEEIRCIGCGAIIQTTDKNAVGFTPTSALE---KGQEKGEIYCQRCFRLRHYNEIQDVQ 64
Query: 155 GNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILV 214
++ D+ + L+ L E ALIV ++DI DFNGS + + G NP++LV
Sbjct: 65 -----------LTDDDFLKLLNELGSEDALIVNVIDIFDFNGSLIPGLHRFVGKNPVLLV 113
Query: 215 VTKVDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRD 274
KVDLLPK + W+ E ++ L V LTS+ A + + I+K +KGR+
Sbjct: 114 GNKVDLLPKSLKRGKMTQWLRERAHEEGLRPEDVLLTSAMKPAEMEVLLDTIEKHRKGRN 173
Query: 275 VYILGSANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGG 333
V+++G NVGKS IN ++K G +D S PGTTL I+I L G
Sbjct: 174 VFVVGVTNVGKSTLINQIIKSTAGVQDLITT---------SQFPGTTLDRIEIP--LDDG 222
Query: 334 K-LYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTI 392
K L DTPG+ H+ A V+ +DL +AP+ ++ + + NE G T+
Sbjct: 223 KFLIDTPGIIHRHQMAHVLGDKDLKLIAPKKEIKPIVYQL-------NE-------GQTL 268
Query: 393 FWGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEG 452
F+GG+ R D LK T + L ++ +KADE YQK++G L PP + + E
Sbjct: 269 FFGGVARFDYLKG-GRHSFTCFTSNDLLIHRTKLEKADELYQKQVGKLLQPP-RENEIEN 326
Query: 453 WKGLDRERLLEIKFEDTERPASDVAISGLGWISV-EP 488
+ L ++FE + + SD+ +GLGW++V EP
Sbjct: 327 FPEL-------VRFEFSVKEKSDIVFAGLGWVTVNEP 356
>gi|317495823|ref|ZP_07954186.1| ribosome biogenesis GTPase YqeH [Gemella morbillorum M424]
gi|316914000|gb|EFV35483.1| ribosome biogenesis GTPase YqeH [Gemella morbillorum M424]
Length = 373
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 127/426 (29%), Positives = 206/426 (48%), Gaps = 61/426 (14%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +Q+ + GY+ E K + ++C RC L + + ++ V
Sbjct: 7 CIGCGAEIQSENQNKQGYLPKSVVE---KSIEENNLVCKRCFRLKNYNEVSDVE------ 57
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGAN-PIILVVTKVD 219
+ A++ + + L ++ LIVK+VDI DF+GS++ + D+ G N I+LV K+D
Sbjct: 58 -----LGAEDFYKLIKTLSKKDGLIVKVVDIFDFSGSWIEDVIDIVGNNKDIVLVANKLD 112
Query: 220 LLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILG 279
LLPK N + W+ + K + V V L S+ GI A+ I + + G+DVYI+G
Sbjct: 113 LLPKSVKQNKIKQWLFKMLKAKGIKVKDVLLISAIKNHGIEEAAARIDELRNGKDVYIIG 172
Query: 280 SANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
+ NVGKS FIN L++ K S PGTTLG I+I +YDTP
Sbjct: 173 ATNVGKSTFINKLIE--------LTTGDKNVITTSHFPGTTLGMIEI-PLDRATSIYDTP 223
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ L + A + A+ L + P+ ++ + F + +E ++F+GG+ R
Sbjct: 224 GIILDYDIAHYLDAKSLKLVMPKKEIKARVFQLNAEQ--------------SLFFGGMAR 269
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
+D +K ++ T Y + ++ AD ++K LG L PP + +K ++
Sbjct: 270 VDFVKGERQS-FTLYASNLVDIHRTKLSNADALFEKHLGTLLKPPF-EDNISIFKNQVKK 327
Query: 460 RLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVEV 519
K +D + D+ ISGLGWI+V NSD E + ++VP+ +EV
Sbjct: 328 NF---KIDDRK---IDIVISGLGWITV--------NSDSGCE-------IDIYVPEEIEV 366
Query: 520 FVRNPM 525
FVR +
Sbjct: 367 FVRESI 372
>gi|418412008|ref|ZP_12985274.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
BVS058A4]
gi|410891591|gb|EKS39388.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
BVS058A4]
Length = 366
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 130/432 (30%), Positives = 214/432 (49%), Gaps = 70/432 (16%)
Query: 96 SAVASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFK-TVLCGRCRLLSHGHMITAVG 154
+ V C GCGAPLQ+ +APGYV +H+ F+ V+C RC L + + + VG
Sbjct: 2 NEVLKCIGCGAPLQSENKEAPGYV--------PEHNMFREDVICRRCFRLKNYNEVQDVG 53
Query: 155 GNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILV 214
+ +++ L+ L +K +IV +VD+ DF GSF+ I+ + G IILV
Sbjct: 54 -----------MESEDFLNLLTGLSEKKGIIVNVVDVFDFEGSFINAIQRIVGNKKIILV 102
Query: 215 VTKVDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRD 274
K+DLLPK + V +W+ ++ K L V L S+ GI + I + D
Sbjct: 103 ANKMDLLPKQINHRRVKEWLRKSARKYGLEAEDVVLISANKGWGIDELLQSINHVRNKDD 162
Query: 275 VYILGSANVGKSAFINALLKK-MGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGG 333
VYI+G+ NVGKS IN L+++ +GE+D S PGTTL I I
Sbjct: 163 VYIVGTTNVGKSTLINKLIEQSVGEKDVVTT---------SRFPGTTLDMIDI-PLDEKS 212
Query: 334 KLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIF 393
++DTPG+ H+ V +L + P++ ++ + + + NE + T+F
Sbjct: 213 FMFDTPGIIQSHQMTNYVSENELKIIIPKNEIKQRVYQL-------NEKQ-------TLF 258
Query: 394 WGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGW 453
+GGL RID + + F+ L ++ T+KA++ ++ +LG L+PP Q+A+ +
Sbjct: 259 FGGLARIDYVSGGKRPLVCFFS-NDLNIHRTKTEKANDLWKSQLGALLSPP---QEAQQF 314
Query: 454 KGLDRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHV 513
L+ + + ++ T+R D+ ISGLG+I+++ + I V V
Sbjct: 315 -NLNDVKAVRLETGKTKR---DIMISGLGFITIDAGAKVI-----------------VRV 353
Query: 514 PKPVEVFVRNPM 525
PK V+V +RN +
Sbjct: 354 PKHVDVILRNSI 365
>gi|241888775|ref|ZP_04776081.1| ribosome biogenesis GTPase YqeH [Gemella haemolysans ATCC 10379]
gi|241864451|gb|EER68827.1| ribosome biogenesis GTPase YqeH [Gemella haemolysans ATCC 10379]
Length = 372
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 125/427 (29%), Positives = 209/427 (48%), Gaps = 64/427 (14%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG +Q+ + GY+ E + ++C RC L + + ++ V
Sbjct: 7 CIGCGVEIQSENQNKQGYLPKSVVEKSIDGN----LVCKRCFRLKNYNEVSDVQ------ 56
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGAN-PIILVVTKVD 219
+ A++ + + L ++ ALIVK+VDI DF+GS++ + D+ G N I+LV K+D
Sbjct: 57 -----LGAEDFYQLIKTLSKKDALIVKVVDIFDFSGSWIEDVVDIVGNNKDIVLVANKLD 111
Query: 220 LLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILG 279
LLPK N V W+ + K + V + L S+ G+ AS I + + G+DVYI+G
Sbjct: 112 LLPKSVKQNKVKQWLFKMLKAKGIKVKDILLISAIKNQGVEEAASRIDELRNGKDVYIVG 171
Query: 280 SANVGKSAFINALLK-KMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDT 338
+ NVGKS FIN L++ G+++ S PGTTLG I+I +YDT
Sbjct: 172 ATNVGKSTFINKLIELTTGDKNVITT---------SHFPGTTLGMIEI-PLDRATSIYDT 221
Query: 339 PGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLV 398
PG+ L + A + A+ L + P+ ++ + F + +E ++F+GG+
Sbjct: 222 PGIILDYDIAHYLDAQSLKLVMPKKEIKARVFQLNAEQ--------------SLFFGGMA 267
Query: 399 RIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDR 458
R+D ++ ++ T Y ++++ AD+ ++K LG L PP + K + +
Sbjct: 268 RMDFVEGERQS-FTLYASNLVEIHRTKLGNADQLFEKHLGTLLKPPFEDNISIFNKQVKK 326
Query: 459 ERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVE 518
++ + D+ ISGLGWI+V NSD SG + +HVP+ +E
Sbjct: 327 SFTIDSR-------KMDIVISGLGWITV--------NSD------SG-CKIDIHVPEEIE 364
Query: 519 VFVRNPM 525
VFVR +
Sbjct: 365 VFVRESI 371
>gi|402300001|ref|ZP_10819554.1| GTPase YqeH [Bacillus alcalophilus ATCC 27647]
gi|401724792|gb|EJS98121.1| GTPase YqeH [Bacillus alcalophilus ATCC 27647]
Length = 371
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 128/425 (30%), Positives = 206/425 (48%), Gaps = 64/425 (15%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG +QT + + GY P E V+C RC L H + + V
Sbjct: 8 CAGCGVKVQTEDREGLGYAPPSALERD-------VVICQRCFRLKHYNEVQDVS------ 54
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ + L+ L + ALIVK+VD+ DFNGS+L + G N ++LV KVDL
Sbjct: 55 -----LTDDDFLKILNTLGEKDALIVKIVDVFDFNGSWLQGLHRFVGKNDVLLVANKVDL 109
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK N + +W+ ++ + L + V L S+ ++ +A+ I K ++G+DVYI+G+
Sbjct: 110 LPKSFKRNKLINWLKKSAKELGLRPVDVCLMSAAKGESVIEIAATIDKLRQGKDVYIVGA 169
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS FIN +++ A ++ S PGTTL I I G LYDTPG
Sbjct: 170 TNVGKSTFINKMIQ-------AFDGDEEQLITTSHFPGTTLDMIDI-PLDDGRTLYDTPG 221
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ HH+ A + ++L + P+ ++ ++++ NE G +F+GGL R+
Sbjct: 222 IINHHQMAHYIDKKELKLITPKKEIK----PIVNQL---NE-------GQALFFGGLARL 267
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D K + Y LQ++ +KAD+ Y LG L PP G + E + L ++
Sbjct: 268 D-FKQGERSSFVSYFSNELQIHRTKVEKADQLYANHLGELLAPP-GPKSKEDFPPLVKK- 324
Query: 461 LLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVEVF 520
+ + +D + D+ SGLG++++ L +A HVPK V V
Sbjct: 325 --DFRIKDKK---VDLVFSGLGFVTI----------------NGTNLDIAAHVPKGVTVS 363
Query: 521 VRNPM 525
+R+ +
Sbjct: 364 IRDSI 368
>gi|418637114|ref|ZP_13199444.1| ribosome biogenesis GTPase YqeH [Staphylococcus lugdunensis VCU139]
gi|374839804|gb|EHS03312.1| ribosome biogenesis GTPase YqeH [Staphylococcus lugdunensis VCU139]
Length = 366
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 127/427 (29%), Positives = 207/427 (48%), Gaps = 70/427 (16%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFK-TVLCGRCRLLSHGHMITAVGGNGGY 159
C GCGAPLQ+ +APGYV +H+ F+ V+C RC L + + + VG
Sbjct: 7 CIGCGAPLQSENKNAPGYV--------PEHNLFREDVICRRCFRLKNYNEVQDVG----- 53
Query: 160 AGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVD 219
+ +++ L+ L +IV +VDI DF GSF+ ++ + G IILV K+D
Sbjct: 54 ------MDSEDFLNLLNGLSDRSGIIVNVVDIFDFEGSFINALKRIVGNKKIILVANKLD 107
Query: 220 LLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILG 279
LLPK + V +W+ + K L V L S++ GI + + I + + DVYI+G
Sbjct: 108 LLPKQINHRRVKEWLKRSAKKYGLEAEEVVLISAEKGWGIEDLLTAINQNRDHDDVYIVG 167
Query: 280 SANVGKSAFINALLK-KMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDT 338
+ NVGKS IN L++ +GE+D S PGTTL I I +YDT
Sbjct: 168 TTNVGKSTLINKLIELSVGEKDVVTT---------SRFPGTTLDMIDI-PLDETSFMYDT 217
Query: 339 PGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLV 398
PG+ H+ +V ++L + P+ ++ + + ++E++ T+F+GGL
Sbjct: 218 PGIIQEHQMTHLVTEKELKTIIPKKEIKQRVYQ-LNESQ-------------TLFFGGLA 263
Query: 399 RIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDR 458
RID + + F+ L ++ T+KA+E ++ +LG LTPP +
Sbjct: 264 RIDYVSGGKRPLICFFS-NDLNIHRTKTEKANELWKNQLGDLLTPP------NNVSNFNL 316
Query: 459 ERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVE 518
+ + ++ E T + D+ ISGLG+I+++ + I V VPK V+
Sbjct: 317 KDIKAVRLE-TGKEKRDIMISGLGFITIDSGAKVI-----------------VRVPKNVD 358
Query: 519 VFVRNPM 525
V +RN +
Sbjct: 359 VVLRNSI 365
>gi|16079621|ref|NP_390445.1| GTP-binding protein YqeH [Bacillus subtilis subsp. subtilis str.
168]
gi|221310492|ref|ZP_03592339.1| GTP-binding protein YqeH [Bacillus subtilis subsp. subtilis str.
168]
gi|221314816|ref|ZP_03596621.1| GTP-binding protein YqeH [Bacillus subtilis subsp. subtilis str.
NCIB 3610]
gi|221319738|ref|ZP_03601032.1| GTP-binding protein YqeH [Bacillus subtilis subsp. subtilis str.
JH642]
gi|221324016|ref|ZP_03605310.1| GTP-binding protein YqeH [Bacillus subtilis subsp. subtilis str.
SMY]
gi|418032254|ref|ZP_12670737.1| GTP-binding protein YqeH [Bacillus subtilis subsp. subtilis str.
SC-8]
gi|428280060|ref|YP_005561795.1| GTP-binding protein YqeH [Bacillus subtilis subsp. natto BEST195]
gi|430756354|ref|YP_007208893.1| hypothetical protein A7A1_0862 [Bacillus subtilis subsp. subtilis
str. BSP1]
gi|449095062|ref|YP_007427553.1| GTP-binding protein [Bacillus subtilis XF-1]
gi|452915399|ref|ZP_21964025.1| ribosome biogenesis GTPase YqeH [Bacillus subtilis MB73/2]
gi|1730981|sp|P54453.1|YQEH_BACSU RecName: Full=Uncharacterized protein YqeH
gi|1303788|dbj|BAA12444.1| YqeH [Bacillus subtilis]
gi|2635013|emb|CAB14509.1| GTPase involved in ribosome 30S assembly [Bacillus subtilis subsp.
subtilis str. 168]
gi|291485017|dbj|BAI86092.1| GTP-binding protein YqeH [Bacillus subtilis subsp. natto BEST195]
gi|351471117|gb|EHA31238.1| GTP-binding protein YqeH [Bacillus subtilis subsp. subtilis str.
SC-8]
gi|407959815|dbj|BAM53055.1| GTP-binding protein YqeH [Bacillus subtilis BEST7613]
gi|407965390|dbj|BAM58629.1| GTP-binding protein YqeH [Bacillus subtilis BEST7003]
gi|430020874|gb|AGA21480.1| Hypothetical protein YqeH [Bacillus subtilis subsp. subtilis str.
BSP1]
gi|449028977|gb|AGE64216.1| GTP-binding protein [Bacillus subtilis XF-1]
gi|452115747|gb|EME06143.1| ribosome biogenesis GTPase YqeH [Bacillus subtilis MB73/2]
Length = 366
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 133/428 (31%), Positives = 201/428 (46%), Gaps = 71/428 (16%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG +QT + GY P + L K++ V+C RC L + + I V
Sbjct: 6 CIGCGVTIQTEDKTGLGYAPPAS--LTKEN-----VICQRCFRLKNYNEIQDVS------ 52
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ L + +L+VK+VDI DFNGS++ ++ L G NPI+LV K D+
Sbjct: 53 -----LTDDDFLNILHGIGETDSLVVKIVDIFDFNGSWINGLQRLVGGNPILLVGNKADI 107
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W+ + L + V L S+ GI V I+ + G+DVY++G
Sbjct: 108 LPKSLKRERLIQWMKREAKELGLKPVDVFLVSAGRGQGIREVIDAIEHYRNGKDVYVVGC 167
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS FIN ++K++ GE D S PGTTL I+I G LYDTP
Sbjct: 168 TNVGKSTFINRIIKEVSGEEDIITT---------SQFPGTTLDAIEI-PLDDGSSLYDTP 217
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ +H+ A V+ +DL L+P+ L+ ++F + + T+++GGL R
Sbjct: 218 GIINNHQMAHYVNKKDLKILSPKKELKPRTFQLNDQQ--------------TLYFGGLAR 263
Query: 400 IDLL--KVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLD 457
D + + P C Y P L ++ + AD Y+K G LTPP GK + + + L
Sbjct: 264 FDYVSGERSPFIC---YMPNELMIHRTKLENADALYEKHAGELLTPP-GKDEMDEFPEL- 318
Query: 458 RERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPV 517
IK + T D+ SGLGW++V + + + PK V
Sbjct: 319 VAHTFTIKDKKT-----DIVFSGLGWVTVHDADKKV----------------TAYAPKGV 357
Query: 518 EVFVRNPM 525
VFVR +
Sbjct: 358 HVFVRRSL 365
>gi|386319137|ref|YP_006015300.1| GTP-binding protein [Staphylococcus pseudintermedius ED99]
gi|323464308|gb|ADX76461.1| GTP-binding protein, putative [Staphylococcus pseudintermedius
ED99]
Length = 366
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 131/425 (30%), Positives = 204/425 (48%), Gaps = 72/425 (16%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA LQ+ + PGYV K + + V+C RC L + + + VG
Sbjct: 7 CIGCGATLQSDDPQKPGYV-------PKASLEKEDVICRRCFRLKNYNEVQDVG------ 53
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
+ +D+ + L+ L + ++V LVD+ DF GSF+ ++ + G IILV K+DL
Sbjct: 54 -----MESDDFLKLLNGLSDKPGIVVNLVDVFDFEGSFIHAVKRIVGNKKIILVANKIDL 108
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + V +W+ + L V L S+ GI G+ I+K + G+DVYI+G+
Sbjct: 109 LPKQINKRRVSEWLRRLAKEYGLYPEDVCLISAYKGIGIDGLLQTIEKHRNGQDVYIVGT 168
Query: 281 ANVGKSAFINALLKK-MGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS IN L+++ +GE++ S +PGTTL I I +YDTP
Sbjct: 169 TNVGKSTLINKLIEQTVGEKNVVTT---------SRIPGTTLDMIDI-PIDDNHYMYDTP 218
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ V + L + P+ ++ + + + NE +S +F GGL R
Sbjct: 219 GIIQEHQMTHYVSTKALNTIMPKKEIKQRVYQL-------NEAQS-------LFIGGLAR 264
Query: 400 IDLLK--VLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLD 457
+D LK P C Y L ++ +KADE ++K++G L+PP K + D
Sbjct: 265 VDYLKGGKRPLVC---YFSNELNIHRTKLEKADELWRKQIGTLLSPPSPKDR------FD 315
Query: 458 RERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPV 517
E+L ++ TE D+ ISGLG+++V+ L V VP+ V
Sbjct: 316 FEQLKTVRLT-TENEKKDIMISGLGFVTVD-----------------AGAELQVIVPQNV 357
Query: 518 EVFVR 522
EV +R
Sbjct: 358 EVTLR 362
>gi|335429482|ref|ZP_08556380.1| GTPase YqeH [Haloplasma contractile SSD-17B]
gi|334889492|gb|EGM27777.1| GTPase YqeH [Haloplasma contractile SSD-17B]
Length = 369
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 122/425 (28%), Positives = 198/425 (46%), Gaps = 62/425 (14%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG +QT D PG+ + E K + C RC L H + + VG
Sbjct: 6 CIGCGVLIQTEHKDKPGFTPKSSLEKKDN-----DIFCKRCFRLKHYNDVQDVG------ 54
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
+S D+ + L+ + +E ALIVK++D+ D GS L I L G N +++V K DL
Sbjct: 55 -----LSNDDFLKILNEVSKEDALIVKVIDLADLTGSILTGINRLIGDNDLLIVGNKRDL 109
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + N + +W+ ++ + + + L S+ G+ + + I+ ++ R+VY++GS
Sbjct: 110 LPKPINDNKIINWMKQSLKEYGMKPVDYVLVSANKGIGVEELLNTIETHRRNRNVYVVGS 169
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS INA++K+ E + S PGTTLG I+I + DTPG
Sbjct: 170 TNVGKSTLINAIIKRFTEEEKDYITT-------SYFPGTTLGIIEI-PLTDEHNIIDTPG 221
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ H+ A + + L + P++ ++ + + + NNE T+F+ GL R
Sbjct: 222 IINKHQYAHYLDQKSLTHITPKNEIKPKVYQL------NNE--------QTLFFDGLARF 267
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D + P + Y + ++ +KAD+ ++ LG LTPP E +K L R
Sbjct: 268 D-FEDGPRSSFVCYFANQVNIHRTKLEKADQLFENHLGKMLTPP----TTEEYKRLGGYR 322
Query: 461 LLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVEVF 520
K T D+ ISG GWI+++ + +A+H PK V VF
Sbjct: 323 RQHFK---TPSYKCDLVISGYGWITID----------------QPNIKIAIHAPKNVGVF 363
Query: 521 VRNPM 525
+R +
Sbjct: 364 IRRSL 368
>gi|410595040|ref|YP_006951767.1| GTP-binding protein, riobosome biogenesis, YqeH [Streptococcus
agalactiae SA20-06]
gi|421532122|ref|ZP_15978491.1| GTPase YqeH [Streptococcus agalactiae STIR-CD-17]
gi|403642630|gb|EJZ03456.1| GTPase YqeH [Streptococcus agalactiae STIR-CD-17]
gi|410518679|gb|AFV72823.1| GTP-binding protein, riobosome biogenesis, YqeH [Streptococcus
agalactiae SA20-06]
Length = 372
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 125/388 (32%), Positives = 189/388 (48%), Gaps = 48/388 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT DA GY E K + + C RC L H + IT V
Sbjct: 6 CIGCGARIQTENKDAAGYTPRAALE---KGLETGELYCQRCFRLRHYNEITDV------- 55
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
V+ DE + L + AL+V ++DI DFNGS + + N ++LV K D+
Sbjct: 56 ----HVTDDEFLKLLHEVGDSDALVVNVIDIFDFNGSIIPGLSRFVAGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK V W+ E ++ L + V LTS+++ I + I+K + GRDVY++G
Sbjct: 112 LPKSVKDGKVTQWLTERAHEEGLRPVDVILTSAQNHHAIKDLIDTIEKYRHGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G RD S PGTTL I+I G ++DTP
Sbjct: 172 TNVGKSTLINAIIREITGSRDVITT---------SRFPGTTLDKIEI-PLDDGSYIFDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + A++L ++P+ ++ +++ + SE T+F GL R
Sbjct: 222 GIIHRHQMAHYLTAKNLKYVSPKKEIKPKTYQLNSEQ--------------TLFLAGLAR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + T Y +L ++ ADEFY K +G LTPP GK+ + D
Sbjct: 268 FDFISGQKQG-FTAYFDNNLNLHRTKLIGADEFYTKHVGKLLTPPTGKEVS------DFP 320
Query: 460 RLLEIKFEDTERPASDVAISGLGWISVE 487
+L ++ E T + D+ SGLGWI V+
Sbjct: 321 KL--VRHEFTIKDKMDIVYSGLGWIRVK 346
>gi|321312052|ref|YP_004204339.1| GTPase YqeH [Bacillus subtilis BSn5]
gi|320018326|gb|ADV93312.1| GTPase YqeH [Bacillus subtilis BSn5]
Length = 366
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 132/428 (30%), Positives = 201/428 (46%), Gaps = 71/428 (16%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG +QT + GY P + L K++ V+C RC L + + I V
Sbjct: 6 CIGCGVTIQTEDKTGLGYAPPAS--LTKEN-----VICQRCFRLKNYNEIQDVS------ 52
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ L + +L+VK+VDI DFNGS++ ++ L G NPI+LV K D+
Sbjct: 53 -----LTDDDFLNILHGIGETDSLVVKIVDIFDFNGSWINGLQRLVGGNPILLVGNKADI 107
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W+ + L + V L S+ GI V I+ + G+DVY++G
Sbjct: 108 LPKSLKRERLIQWMKREAKELGLKPVDVFLVSAGRGQGIREVIDAIEHYRNGKDVYVVGC 167
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS FIN ++K++ GE D S PGTTL I+I G LYDTP
Sbjct: 168 TNVGKSTFINRIIKEVSGEEDIITT---------SQFPGTTLDAIEI-PLDDGSSLYDTP 217
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ +H+ A V+ +DL L+P+ L+ ++F + + T+++GGL R
Sbjct: 218 GIINNHQMAHYVNKKDLKILSPKKELKPRTFQLNDQQ--------------TLYFGGLAR 263
Query: 400 IDLL--KVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLD 457
D + + P C Y P L ++ + AD Y+K G LTPP GK + + + L
Sbjct: 264 FDYVSGERSPFIC---YMPNELMIHRTKLENADALYEKHAGELLTPP-GKDEMDEFPEL- 318
Query: 458 RERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPV 517
IK + T D+ SGLGW++V + + + PK V
Sbjct: 319 VAHTFTIKDKKT-----DIVFSGLGWVTVHDADKKV----------------TAYAPKGV 357
Query: 518 EVFVRNPM 525
VF+R +
Sbjct: 358 HVFIRRSL 365
>gi|312867215|ref|ZP_07727425.1| ribosome biogenesis GTPase YqeH [Streptococcus parasanguinis F0405]
gi|419799139|ref|ZP_14324507.1| ribosome biogenesis GTPase YqeH [Streptococcus parasanguinis F0449]
gi|311097344|gb|EFQ55578.1| ribosome biogenesis GTPase YqeH [Streptococcus parasanguinis F0405]
gi|385698679|gb|EIG29026.1| ribosome biogenesis GTPase YqeH [Streptococcus parasanguinis F0449]
Length = 368
Score = 178 bits (451), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 130/426 (30%), Positives = 206/426 (48%), Gaps = 65/426 (15%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGAP+QT + GY E K + V C RC L H + IT V
Sbjct: 6 CIGCGAPIQTENKEGLGYTPQSALE---KGLETGEVYCQRCFRLRHYNEITDV------- 55
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ + L + AL+V +VDI DFNGS + + N ++LV K D+
Sbjct: 56 ----HLTDDDFLKLLHEVGDSDALVVNVVDIFDFNGSVIPGLPRFVAGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + V W++E ++ + + V LTS+++ + I + +I++ +KGRDVY++G
Sbjct: 112 LPKSVKDSKVTHWLMERAHEEGMRPVDVVLTSAQNKSAIKDLMEKIEQYRKGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G++D S PGTTL I+I G +YDTP
Sbjct: 172 TNVGKSTLINAIIQEITGDKDIITT---------SRFPGTTLDKIEI-PLDDGSYIYDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + A++L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLTAKNLKYVSPKKEIKPKTYQLNPEQ--------------TLFLGGLGR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D +K + F+ L+++ + A FY K +G LTPP K+K E + L
Sbjct: 268 FDFIKGEKQGFTAFFD-NELKLHRTKLEGATAFYNKHVGGLLTPPNSKEKEE-FPPL--- 322
Query: 460 RLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVEV 519
+ E T + +D+ ISGLGWI V +GE +AV P+ V V
Sbjct: 323 ----VSHEFTIKDKTDLVISGLGWIRV-----------------NGEAKVAVWAPEGVAV 361
Query: 520 FVRNPM 525
R +
Sbjct: 362 VTRKAI 367
>gi|77408261|ref|ZP_00785004.1| GTP-binding protein [Streptococcus agalactiae COH1]
gi|339300938|ref|ZP_08650063.1| GTP-binding protein [Streptococcus agalactiae ATCC 13813]
gi|421148017|ref|ZP_15607689.1| GTPase YqeH [Streptococcus agalactiae GB00112]
gi|77173119|gb|EAO76245.1| GTP-binding protein [Streptococcus agalactiae COH1]
gi|319745586|gb|EFV97887.1| GTP-binding protein [Streptococcus agalactiae ATCC 13813]
gi|401685355|gb|EJS81363.1| GTPase YqeH [Streptococcus agalactiae GB00112]
Length = 372
Score = 178 bits (451), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 124/388 (31%), Positives = 189/388 (48%), Gaps = 48/388 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT DA GY E K + + C RC L H + IT V
Sbjct: 6 CIGCGARIQTENKDAAGYTPRAALE---KGLETGELYCQRCFRLRHYNEITDV------- 55
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ DE + L + AL+V ++DI DFNGS + + N ++LV K D+
Sbjct: 56 ----HITDDEFLKLLHEVGDSDALVVNVIDIFDFNGSIIPGLSRFVAGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK V W+ E ++ L + V LTS+++ I + I+K + GRDVY++G
Sbjct: 112 LPKSVKDGKVTQWLTERAHEEGLRPVDVILTSAQNHHAIKDLIDTIEKYRHGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G RD S PGTTL I+I G ++DTP
Sbjct: 172 TNVGKSTLINAIIREITGSRDVITT---------SRFPGTTLDKIEI-PLDDGSYIFDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + A++L ++P+ ++ +++ + SE T+F GL R
Sbjct: 222 GIIHRHQMAHYLTAKNLKYVSPKKEIKPKTYQLNSEQ--------------TLFLAGLAR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + T Y +L ++ ADEFY K +G LTPP GK+ + D
Sbjct: 268 FDFISGQKQG-FTAYFDNNLNLHRTKLVGADEFYTKHVGKLLTPPTGKEVS------DFP 320
Query: 460 RLLEIKFEDTERPASDVAISGLGWISVE 487
+L ++ E T + D+ SGLGWI V+
Sbjct: 321 KL--VRHEFTIKDKMDIVYSGLGWIRVK 346
>gi|25011748|ref|NP_736143.1| GTP-binding protein YqeH [Streptococcus agalactiae NEM316]
gi|77414364|ref|ZP_00790520.1| GTP-binding protein [Streptococcus agalactiae 515]
gi|24413288|emb|CAD47367.1| Unknown [Streptococcus agalactiae NEM316]
gi|77159599|gb|EAO70754.1| GTP-binding protein [Streptococcus agalactiae 515]
Length = 372
Score = 178 bits (451), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 124/388 (31%), Positives = 189/388 (48%), Gaps = 48/388 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT DA GY E K + + C RC L H + IT V
Sbjct: 6 CIGCGARIQTENKDAAGYTPRAALE---KGLETGELYCQRCFRLRHYNEITDV------- 55
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ DE + L + AL+V ++DI DFNGS + + N ++LV K D+
Sbjct: 56 ----HITDDEFLKLLHEVGDSDALVVNVIDIFDFNGSIIPGLSRFVAGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK V W+ E ++ L + V LTS+++ I + I+K + GRDVY++G
Sbjct: 112 LPKSVKDGKVTQWLTERAHEEGLRPVDVILTSAQNHHAIKDLIDTIEKYRHGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G RD S PGTTL I+I G ++DTP
Sbjct: 172 TNVGKSTLINAIIREITGSRDVITT---------SRFPGTTLDKIEI-PLDDGSYIFDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + A++L ++P+ ++ +++ + SE T+F GL R
Sbjct: 222 GIIHRHQMAHYLTAKNLKYVSPKKEIKPKTYQLNSEQ--------------TLFLAGLAR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + T Y +L ++ ADEFY K +G LTPP GK+ + D
Sbjct: 268 FDFISGQKQG-FTAYFDNNLNLHRTKLVGADEFYTKHVGKLLTPPTGKEVS------DFP 320
Query: 460 RLLEIKFEDTERPASDVAISGLGWISVE 487
+L ++ E T + D+ SGLGWI V+
Sbjct: 321 KL--VRHEFTIKNKMDIVYSGLGWIRVK 346
>gi|403070192|ref|ZP_10911524.1| GTPase YqeH [Oceanobacillus sp. Ndiop]
Length = 366
Score = 178 bits (451), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 121/390 (31%), Positives = 192/390 (49%), Gaps = 57/390 (14%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGAP+QT + +A GY + E + +LC RC L H + I V
Sbjct: 6 CQGCGAPIQTEDPNAIGYTPASSLEKED-------ILCKRCFRLKHYNEIQDVS------ 52
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ + +S +R L+V ++DI D +GS + + + G NPIILV K+DL
Sbjct: 53 -----ITDDDFLQMVSSIREANGLVVHVIDIFDVDGSLIKSLPRITGDNPIILVGNKLDL 107
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK T+ N + W+ + V V L SS GI + +I+ + ++VYI+G+
Sbjct: 108 LPKSTNRNKLEQWLRTEAKDAGIKVKDVFLISSVKGTGIEELTEQIEWYRNNKNVYIVGT 167
Query: 281 ANVGKSAFINALLKK---MGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYD 337
NVGKS FIN L+K+ MGE + Y PGTTLG I+I L D
Sbjct: 168 TNVGKSTFINRLIKQSTGMGE-----VITTSY------FPGTTLGFIEI-PLDENTSLID 215
Query: 338 TPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGL 397
TPG+ + A + EDL + P+ ++ + + + S+ T+++GGL
Sbjct: 216 TPGIVNKQQMAHYISDEDLKIITPKKEIKARVYQLNSQQ--------------TLYFGGL 261
Query: 398 VRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLD 457
RID +K ++ + ++ L ++ +KADE Y+ G L+PP K +
Sbjct: 262 ARIDFIKGDRQSFVCYFS-NELPIHRTKLEKADELYENHAGELLSPPNEKTLEQ------ 314
Query: 458 RERLLEIKFE-DTERPASDVAISGLGWISV 486
+L+E F+ D E+ +D+ GLGW+S+
Sbjct: 315 LPKLVESTFKIDGEK--TDIVFPGLGWVSI 342
>gi|415692715|ref|ZP_11454635.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus
CGS03]
gi|315129875|gb|EFT85865.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus
CGS03]
Length = 366
Score = 178 bits (451), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 130/432 (30%), Positives = 208/432 (48%), Gaps = 70/432 (16%)
Query: 96 SAVASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKT-VLCGRCRLLSHGHMITAVG 154
S + C GCGAPLQ+ + + PG+V +H+ F+ V+C RC L + + + VG
Sbjct: 2 SDILKCIGCGAPLQSEDKNKPGFV--------PEHNMFRDDVICRRCFRLKNYNEVQDVG 53
Query: 155 GNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILV 214
+ +++ + LS L +K ++V +VD+ F GSF+ ++ + G IIL
Sbjct: 54 -----------LESEDFLKLLSGLADKKGIVVNVVDVFYFEGSFINAVKRIVGNKKIILA 102
Query: 215 VTKVDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRD 274
K+DLLPK + V +W+ K L V L S++ GI + S I ++ D
Sbjct: 103 ANKLDLLPKQINKRRVKEWLKRTARKYGLEADDVVLISAEKGWGIDDLLSSIANIRENED 162
Query: 275 VYILGSANVGKSAFINALLK-KMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGG 333
VYI+G+ NVGKS IN L++ +GE+D S PGTTL I I
Sbjct: 163 VYIVGTTNVGKSTLINKLIEASVGEKDVVTT---------SRFPGTTLDMIDI-PLDESS 212
Query: 334 KLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIF 393
+YDTPG+ H+ +V ++L + P+ ++ + + + NE + T+F
Sbjct: 213 FMYDTPGIIQDHQMTHLVSEKELKIIMPKKEIKQRVYQL-------NEAQ-------TLF 258
Query: 394 WGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGW 453
+GGL RID + + F+ L ++ T+KA++ ++ +LG LTPP Q
Sbjct: 259 FGGLARIDYVSGGKRPLVCFFS-NDLNIHRTKTEKANDLWRNQLGDLLTPPGNPQ----- 312
Query: 454 KGLDRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHV 513
D L ++ E T + DV ISGLG+I++ P + I V V
Sbjct: 313 -NFDLNELKAVRLE-TGKEKRDVMISGLGFITIGPGAKVI-----------------VRV 353
Query: 514 PKPVEVFVRNPM 525
PK V+V +RN +
Sbjct: 354 PKNVDVVLRNSI 365
>gi|337281510|ref|YP_004620981.1| GTP-binding protein [Streptococcus parasanguinis ATCC 15912]
gi|387879069|ref|YP_006309372.1| hypothetical protein Spaf_0549 [Streptococcus parasanguinis FW213]
gi|335369103|gb|AEH55053.1| GTP-binding protein [Streptococcus parasanguinis ATCC 15912]
gi|386792524|gb|AFJ25559.1| hypothetical protein Spaf_0549 [Streptococcus parasanguinis FW213]
Length = 368
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 133/427 (31%), Positives = 207/427 (48%), Gaps = 67/427 (15%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGAP+QT + GY E K + V C RC L H + IT V
Sbjct: 6 CIGCGAPIQTENKEGLGYTPQSALE---KGLETGEVYCQRCFRLRHYNEITDV------- 55
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ + L + AL+V +VDI DFNGS + + N ++LV K D+
Sbjct: 56 ----HLTDDDFLKLLHEVGDSDALVVNVVDIFDFNGSVIPGLPRFVAGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + V W++E ++ + + V LTS+++ + I + +I++ +KGRDVY++G
Sbjct: 112 LPKSVKDSKVTHWLMERAHEEGMRPVDVVLTSAQNKSAIKDLMEKIEQYRKGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G++D S PGTTL I+I G +YDTP
Sbjct: 172 TNVGKSTLINAIIQEITGDKDIITT---------SRFPGTTLDKIEI-PLDDGSYIYDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLN-GFTIFWGGLV 398
G+ H+ A + A++L ++P+ ++ K++ LN G T+F GGL
Sbjct: 222 GIIHRHQMAHYLTAKNLKYVSPKKEIKP---------------KTYQLNPGQTLFLGGLG 266
Query: 399 RIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDR 458
R D +K + F+ L+++ + A FY K +G LTPP K+K E + L
Sbjct: 267 RFDFIKGEKQGFTAFFD-NELKLHRTKLEGATAFYDKHVGGLLTPPNSKEKEE-FPPL-- 322
Query: 459 ERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVE 518
+ E T + +D+ ISGLGWI V +GE +AV P+ V
Sbjct: 323 -----VSHEFTIKDKTDLVISGLGWIRV-----------------NGEAKVAVWAPEGVA 360
Query: 519 VFVRNPM 525
V R +
Sbjct: 361 VVTRKAI 367
>gi|77411900|ref|ZP_00788232.1| GTP-binding protein [Streptococcus agalactiae CJB111]
gi|77162060|gb|EAO73039.1| GTP-binding protein [Streptococcus agalactiae CJB111]
Length = 372
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 124/388 (31%), Positives = 189/388 (48%), Gaps = 48/388 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT DA GY E K + + C RC L H + IT V
Sbjct: 6 CIGCGARIQTENKDAAGYTPRAALE---KGLETGELYCQRCFRLRHYNEITDV------- 55
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ DE + L + AL+V ++DI DFNGS + + N ++LV K D+
Sbjct: 56 ----HITDDEFLKLLHEVGDSDALVVNVIDIFDFNGSIIPGLSRFVAGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK V W+ E ++ L + V LTS+++ I + I+K + GRDVY++G
Sbjct: 112 LPKSVKDGKVTQWLTERAHEEGLRPVDVILTSAQNHHAIKDLIDTIEKYRHGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G RD S PGTTL I+I G ++DTP
Sbjct: 172 TNVGKSTLINAIIREITGSRDVITT---------SRFPGTTLDKIEI-PLDDGSYIFDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + A++L ++P+ ++ +++ + SE T+F GL R
Sbjct: 222 GIIHRHQMAHYLTAKNLKYVSPKKEIKPKTYQLNSEQ--------------TLFLAGLAR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + T Y +L ++ ADEFY K +G LTPP GK+ + D
Sbjct: 268 FDFISGQKQG-FTAYFDNNLNLHRTKLVGADEFYTKHVGKLLTPPTGKEVS------DFP 320
Query: 460 RLLEIKFEDTERPASDVAISGLGWISVE 487
+L ++ E T + D+ SGLGWI V+
Sbjct: 321 KL--VRHEFTIKDKMDIVYSGLGWIRVK 346
>gi|336114443|ref|YP_004569210.1| nitric-oxide synthase [Bacillus coagulans 2-6]
gi|335367873|gb|AEH53824.1| Nitric-oxide synthase [Bacillus coagulans 2-6]
Length = 368
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 132/427 (30%), Positives = 202/427 (47%), Gaps = 69/427 (16%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT + D GY E ++ V+C RC L H + + V
Sbjct: 8 CIGCGALIQTEDPDEAGYAPKSALEKEQ-------VICQRCFRLKHYNEVQDVP------ 54
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ + L+ L + AL+VK+VDI DFNGS+L AG NP++L+ K DL
Sbjct: 55 -----LTDDDFLKILNRLGQVDALVVKIVDIFDFNGSWLPGFHRFAGKNPVLLIGNKEDL 109
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + +W+ + + L V L S+ G+ + I++ + G+DVY+ G
Sbjct: 110 LPKSVKRAKMANWMKQQAKELGLRPADVLLVSAAKGHGMDEAMAAIEQYRNGKDVYVAGC 169
Query: 281 ANVGKSAFINALLKK-MGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS FIN ++++ GE+D S PGTTL I I G LYDTP
Sbjct: 170 TNVGKSTFINRIIRQATGEKDVITT---------SYFPGTTLDMIGI-PLDDGTSLYDTP 219
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ HH+ A V +L + P+ ++ F + NE + T+F+GGL R
Sbjct: 220 GIINHHQMAHFVGKNELKVITPKKEIKPAVFQL-------NERQ-------TLFFGGLAR 265
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
+D +K Y +L+++ + AD+ Y ++LG L PP GK +A + L R
Sbjct: 266 LDYIKG-GRRSFVCYVSNALKIHRTKLENADDLYARQLGELLQPP-GKAEAADFPALVRH 323
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV-EPVRRSIRNSDINLESTSGELHLAVHVPKPVE 518
+ +D+ SGLGW++V EP G + +A +VPK V
Sbjct: 324 EF------SIKEGKTDIVFSGLGWVTVNEP----------------GAV-VAAYVPKGVR 360
Query: 519 VFVRNPM 525
V +R +
Sbjct: 361 VMLRRSL 367
>gi|315658127|ref|ZP_07910999.1| ribosome biogenesis GTPase YqeH [Staphylococcus lugdunensis M23590]
gi|315496456|gb|EFU84779.1| ribosome biogenesis GTPase YqeH [Staphylococcus lugdunensis M23590]
Length = 366
Score = 177 bits (450), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 127/427 (29%), Positives = 206/427 (48%), Gaps = 70/427 (16%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFK-TVLCGRCRLLSHGHMITAVGGNGGY 159
C GCGAPLQ+ +APGYV +H+ F+ V+C RC L + + + VG
Sbjct: 7 CIGCGAPLQSENKNAPGYV--------PEHNLFREDVICRRCFRLKNYNEVQDVG----- 53
Query: 160 AGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVD 219
+ +++ L+ L +IV +VDI DF GSF+ ++ + G IILV K+D
Sbjct: 54 ------MDSEDFLNLLNGLSDRSGIIVNVVDIFDFEGSFINALKRIVGNKKIILVANKLD 107
Query: 220 LLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILG 279
LLPK + V +W+ + K L V L S++ GI + + I + + DVYI+G
Sbjct: 108 LLPKQINHRRVKEWLKRSAKKYGLEAEEVVLISAEKGWGIEDLLTAINQNRDHDDVYIVG 167
Query: 280 SANVGKSAFINALLK-KMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDT 338
+ NVGKS IN L++ +GE+D S PGTTL I I +YDT
Sbjct: 168 TTNVGKSTLINKLIELSVGEKDVVTT---------SRFPGTTLDMIDI-PLDETSFMYDT 217
Query: 339 PGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLV 398
PG+ H+ +V ++L + P+ ++ + + ++E++ T+F GGL
Sbjct: 218 PGIIQEHQMTHLVTEKELKTIIPKKEIKQRVYQ-LNESQ-------------TLFLGGLA 263
Query: 399 RIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDR 458
RID + + F+ L ++ T+KA+E ++ +LG LTPP +
Sbjct: 264 RIDYVSGGKRPLICFFS-NDLNIHRTKTEKANELWKNQLGDLLTPP------NNVSNFNL 316
Query: 459 ERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVE 518
+ + ++ E T + D+ ISGLG+I+++ + I V VPK V+
Sbjct: 317 KDIKAVRLE-TGKEKRDIMISGLGFITIDSGAKVI-----------------VRVPKNVD 358
Query: 519 VFVRNPM 525
V +RN +
Sbjct: 359 VVLRNSI 365
>gi|333395903|ref|ZP_08477720.1| GTPase YqeH [Lactobacillus coryniformis subsp. coryniformis KCTC
3167]
gi|420146238|ref|ZP_14653668.1| GTP-binding protein [Lactobacillus coryniformis subsp. coryniformis
CECT 5711]
gi|398402054|gb|EJN55447.1| GTP-binding protein [Lactobacillus coryniformis subsp. coryniformis
CECT 5711]
Length = 373
Score = 177 bits (450), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 131/387 (33%), Positives = 187/387 (48%), Gaps = 48/387 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT++ DA GY E K V C RC L H + I+ V
Sbjct: 11 CIGCGAQIQTTDPDAAGYTPASALE---KGLAAGEVYCQRCFRLRHYNEISDVR------ 61
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ + L+ + ALIV ++DI DF+GS + + G NP++LV KVD+
Sbjct: 62 -----LTDDDFLKLLTQIGDTDALIVNVIDIFDFSGSIIPGLHRFVGKNPVLLVGNKVDV 116
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK V W+ E L L V LTS+KS + + + I K + GRDVY++G
Sbjct: 117 LPKSVKRGKVRHWLQEQAHAVGLRPLDVLLTSAKSGYELDELLAAIDKYRAGRDVYVVGV 176
Query: 281 ANVGKSAFINALLKK-MGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS IN ++K+ G +D S PGTTL I+I G +L DTP
Sbjct: 177 TNVGKSTLINQIIKRTTGTQDLITT---------SRFPGTTLDKIEI-PLDDGHQLIDTP 226
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ + A + +DL +APQ ++ ++F + SE T+F GGL R
Sbjct: 227 GIIHREQMAYYLGPKDLRLVAPQKPIKPKTFQLNSEQ--------------TLFLGGLAR 272
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + P T T Y +L V+ AD+FY ++ G L PP + A D
Sbjct: 273 FDYERG-PHTGFTLYLDNNLLVHRTKLSNADDFYDRQAGKLLQPPRPNELA------DFP 325
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
L I+F T + SD+ +GLGWI+V
Sbjct: 326 PLARIQF--TPKVKSDLVFAGLGWITV 350
>gi|417917766|ref|ZP_12561325.1| ribosome biogenesis GTPase YqeH [Streptococcus parasanguinis SK236]
gi|342830403|gb|EGU64742.1| ribosome biogenesis GTPase YqeH [Streptococcus parasanguinis SK236]
Length = 368
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 133/427 (31%), Positives = 207/427 (48%), Gaps = 67/427 (15%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGAP+QT + G+ E K + V C RC L H + IT V
Sbjct: 6 CIGCGAPIQTENKEGLGFTPQSALE---KGLETGEVYCQRCFRLRHYNEITDV------- 55
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ + L + AL+V +VDI DFNGS + + N ++LV K D+
Sbjct: 56 ----HLTDDDFLKLLHEVGDSDALVVNVVDIFDFNGSVIPGLPRFVAGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + V W++E ++ + + V LTS+++ + I + +I++ +KGRDVY++G
Sbjct: 112 LPKSVKDSKVTHWLMERAHEEGMRPVDVVLTSAQNKSAIKDLMEKIEQYRKGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G++D S PGTTL I+I G +YDTP
Sbjct: 172 TNVGKSTLINAIIQEITGDKDIITT---------SRFPGTTLDKIEI-PLDDGSYIYDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLN-GFTIFWGGLV 398
G+ H+ A + A++L ++P+ ++ K++ LN G T+F GGL
Sbjct: 222 GIIHRHQMAHYLTAKNLKYVSPKKEIKP---------------KTYQLNPGQTLFLGGLG 266
Query: 399 RIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDR 458
R D +K + F+ L+++ + A FY K +G LTPP K+K E + L
Sbjct: 267 RFDFIKGEKQGFTAFFD-NELKLHRTKLEGATAFYDKHVGGLLTPPNSKEKEE-FPPL-- 322
Query: 459 ERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVE 518
+ E T + +D+ ISGLGWI V SGE +AV P+ V
Sbjct: 323 -----VSHEFTIKDKTDLVISGLGWIRV-----------------SGEAKVAVWAPEGVA 360
Query: 519 VFVRNPM 525
V R +
Sbjct: 361 VVTRKAI 367
>gi|417912142|ref|ZP_12555837.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU105]
gi|420187200|ref|ZP_14693221.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM039]
gi|341651153|gb|EGS74958.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU105]
gi|394256179|gb|EJE01112.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM039]
Length = 366
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 129/432 (29%), Positives = 212/432 (49%), Gaps = 70/432 (16%)
Query: 96 SAVASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFK-TVLCGRCRLLSHGHMITAVG 154
+ + C GCGA LQ+ DAPGYV +H+ F+ V+C RC L + + + VG
Sbjct: 2 NEILKCIGCGATLQSENKDAPGYV--------PEHNMFREDVICRRCFRLKNYNEVQDVG 53
Query: 155 GNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILV 214
+ +++ L+ L +K +IV +VD+ DF GSF+ I+ + G IILV
Sbjct: 54 -----------MESEDFLNLLTGLSEKKGIIVNVVDVFDFEGSFINAIQRIVGNKKIILV 102
Query: 215 VTKVDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRD 274
K+DLLPK + V +W+ ++ K L V L S+ GI + I + D
Sbjct: 103 ANKIDLLPKQINHRRVKEWLRKSARKYGLEAEDVVLISANKGWGIDELLQSINHVRNKDD 162
Query: 275 VYILGSANVGKSAFINALLKK-MGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGG 333
VYI+G+ NVGKS IN L+++ +GE+D S PGTTL I I
Sbjct: 163 VYIVGTTNVGKSTLINKLIEQSVGEKDVVTT---------SRFPGTTLDMIDI-PLDEKS 212
Query: 334 KLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIF 393
++DTPG+ H+ V +L + P++ ++ + + + NE + T+F
Sbjct: 213 FMFDTPGIIQSHQMTNYVSENELKIIIPKNEIKQRVYQL-------NEKQ-------TLF 258
Query: 394 WGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGW 453
+GGL RID + + F+ L ++ T+KA++ ++ +LG L+PP Q A+ +
Sbjct: 259 FGGLARIDYVSGGKRPLVCFFS-NDLNIHRTKTEKANDLWKSQLGALLSPP---QDAQQF 314
Query: 454 KGLDRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHV 513
L+ + + ++ T+R D+ ISGLG+I+++ + I V V
Sbjct: 315 -NLNDVKAVRLETGKTKR---DIMISGLGFITIDAGAKVI-----------------VRV 353
Query: 514 PKPVEVFVRNPM 525
PK V+V +RN +
Sbjct: 354 PKHVDVILRNSI 365
>gi|329767815|ref|ZP_08259331.1| ribosome biogenesis GTPase YqeH [Gemella haemolysans M341]
gi|328838916|gb|EGF88510.1| ribosome biogenesis GTPase YqeH [Gemella haemolysans M341]
Length = 372
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 126/433 (29%), Positives = 209/433 (48%), Gaps = 76/433 (17%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG +Q+ + + GY+ E + ++C RC L + + ++ V
Sbjct: 7 CIGCGVEIQSEDQNKQGYLPKSVVEKSIDGN----LVCKRCFRLKNYNEVSDVQ------ 56
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGAN-PIILVVTKVD 219
+ A++ + + L ++ ALIVK+VDI DF+GS++ + D+ G N I+LV K+D
Sbjct: 57 -----LGAEDFYQLIKTLSKKDALIVKVVDIFDFSGSWIEDVVDIVGNNKDIVLVANKLD 111
Query: 220 LLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILG 279
LLPK N V W+ + K + V + L S+ G+ AS I + + G+DVYI+G
Sbjct: 112 LLPKSVKQNKVKQWLFKMLKAKGIKVKDILLISAIKNQGVEEAASRIDELRNGKDVYIVG 171
Query: 280 SANVGKSAFINALLK-KMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDT 338
+ NVGKS FIN L++ G+++ S PGTTLG I+I +YDT
Sbjct: 172 ATNVGKSTFINKLIELTTGDKNVITT---------SHFPGTTLGMIEI-PLDRATSIYDT 221
Query: 339 PGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLV 398
PG+ L + A + A+ L + P+ ++ + F + +E ++F+GG+
Sbjct: 222 PGIILDYDIAHYLDAQSLKLVMPKKEIKARVFQLNAEQ--------------SLFFGGMA 267
Query: 399 RIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPP------IGKQKAEG 452
R+D ++ ++ T Y ++++ AD ++K LG L PP I + +
Sbjct: 268 RMDFVEGERQS-FTLYASNLVEIHRTKLSNADALFEKHLGTLLKPPFEDNISIFNNQVKK 326
Query: 453 WKGLDRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVH 512
+D ++ D+ ISGLGWI+V NSD SG + +H
Sbjct: 327 SFTIDSRKM-------------DIVISGLGWITV--------NSD------SG-CKIDIH 358
Query: 513 VPKPVEVFVRNPM 525
VP+ +EVFVR +
Sbjct: 359 VPEEIEVFVRESI 371
>gi|386759166|ref|YP_006232382.1| hypothetical protein MY9_2593 [Bacillus sp. JS]
gi|384932448|gb|AFI29126.1| hypothetical protein MY9_2593 [Bacillus sp. JS]
Length = 366
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 133/428 (31%), Positives = 200/428 (46%), Gaps = 71/428 (16%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG +QT + GY P + L K++ V+C RC L + + I V
Sbjct: 6 CIGCGVAIQTEDKTGLGYAPPAS--LTKEN-----VICQRCFRLKNYNEIQDVS------ 52
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ L + +L+VK+VDI DFNGS++ ++ L G NPI+LV K D+
Sbjct: 53 -----LTDDDFLNILHGIGETDSLVVKIVDIFDFNGSWINGLQRLVGGNPILLVGNKADI 107
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W+ + L + V L S+ GI V I+ + G+DVY++G
Sbjct: 108 LPKSLKRERLIQWMKREAKELGLKPVDVFLVSAGRGQGIKEVIDAIEHYRNGKDVYVVGC 167
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS FIN ++K++ GE D S PGTTL I+I G LYDTP
Sbjct: 168 TNVGKSTFINRIIKEVSGEEDIITT---------SQFPGTTLDAIEI-PLDDGSALYDTP 217
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ +H+ A V+ +DL L+P+ L+ ++F + + T+++GGL R
Sbjct: 218 GIINNHQMAHYVNKKDLKILSPKKELKPRTFQLNDQQ--------------TLYFGGLAR 263
Query: 400 IDLL--KVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLD 457
D + + P C Y P L ++ AD Y+K G LTPP GK + + + L
Sbjct: 264 FDYVSGERSPFIC---YMPNELMIHRTKLKNADALYEKHAGELLTPP-GKDEMDEFPEL- 318
Query: 458 RERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPV 517
IK + T D+ SGLGW++V + + + PK V
Sbjct: 319 VAHTFTIKDKKT-----DIVFSGLGWVTVHDADKKV----------------TAYAPKGV 357
Query: 518 EVFVRNPM 525
VFVR +
Sbjct: 358 HVFVRRSL 365
>gi|418322703|ref|ZP_12934017.1| ribosome biogenesis GTPase YqeH [Staphylococcus pettenkoferi
VCU012]
gi|365231150|gb|EHM72209.1| ribosome biogenesis GTPase YqeH [Staphylococcus pettenkoferi
VCU012]
Length = 368
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 137/432 (31%), Positives = 210/432 (48%), Gaps = 70/432 (16%)
Query: 96 SAVASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKT-VLCGRCRLLSHGHMITAVG 154
+ V C GCGAPLQ+ + APGYV +H+ F+ V+C RC L H + + VG
Sbjct: 4 TEVLRCIGCGAPLQSEDPKAPGYV--------PEHNLFRDDVVCKRCFRLKHYNEVQDVG 55
Query: 155 GNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILV 214
+ +++ L+ L +K ++V +VD+ DF GSF+ ++ + G IIL
Sbjct: 56 -----------MDSEDFLNLLNTLADKKGIVVNVVDVFDFEGSFINAVKRIVGNKKIILA 104
Query: 215 VTKVDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRD 274
KVDLLPK + N V DW+ K L+ +V L S++ GI + I K ++ D
Sbjct: 105 ANKVDLLPKQINKNRVRDWLRRTARKYGLDAEAVVLLSAQHNKGIQDLIDAINKVRRNED 164
Query: 275 VYILGSANVGKSAFINALLKK-MGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGG 333
VYI+G+ NVGKS+ IN L+++ +GE+D S PGTTL I I
Sbjct: 165 VYIVGTTNVGKSSLINRLIEQSVGEKDVVTT---------SRFPGTTLDMIDI-PLDETS 214
Query: 334 KLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIF 393
+YDTPG+ H+ V E+L + P++ ++ + + + NE G T+F
Sbjct: 215 FMYDTPGIIQDHQMTHYVTPEELKIIIPKNEIKQRVYQL-------NE-------GQTLF 260
Query: 394 WGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGW 453
+GGL RID + L Y L ++ T+KAD+ + LG LTPP
Sbjct: 261 FGGLARIDYVSG-GRRSLVCYFSNELNIHRTKTEKADDLWHNHLGEMLTPPTSASH---- 315
Query: 454 KGLDRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHV 513
D ++ ++ E T + DV ISGLG+I++E + + VHV
Sbjct: 316 --FDLSQVKRVRLE-TGKEKRDVMISGLGFITIEAGAK-----------------VVVHV 355
Query: 514 PKPVEVFVRNPM 525
PK V+V +R +
Sbjct: 356 PKDVDVVLRKSI 367
>gi|398818043|ref|ZP_10576642.1| ribosome biogenesis GTPase YqeH [Brevibacillus sp. BC25]
gi|398028841|gb|EJL22344.1| ribosome biogenesis GTPase YqeH [Brevibacillus sp. BC25]
Length = 373
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 131/424 (30%), Positives = 197/424 (46%), Gaps = 61/424 (14%)
Query: 99 ASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGG 158
SC GCG +QT+++ PGY P++ +K V+C RC + H + + VG
Sbjct: 7 GSCAGCGIAIQTADAKKPGYA-PESALGRK------VVICQRCYRIKHYNEVAPVG---- 55
Query: 159 YAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKV 218
+ D+ + L + +AL+V +VDI DF GS+L + G NPI+LV KV
Sbjct: 56 -------MGDDDFLKILDGIGSTQALVVMVVDIFDFQGSWLKGLPRFVGKNPILLVGNKV 108
Query: 219 DLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYIL 278
DLLPK + N V +W+ ++ L V L S++ I + + I + +KGRDVYI+
Sbjct: 109 DLLPKNINLNRVRNWMQHEAKERGLRPEDVVLISAQKGLHIDELLNRIGELRKGRDVYIV 168
Query: 279 GSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDT 338
G NVGKS IN +L G A + S PGTTL I+I G ++DT
Sbjct: 169 GVTNVGKSTMINRILHDYG--------AAELEITTSPFPGTTLDKIEI-PLEDGRSIFDT 219
Query: 339 PGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLV 398
PG+ + +V DL + P SR+ + + + +G ++F GGL
Sbjct: 220 PGIINRDQIGHMVSPTDLRKITPTSRINSKVYQLD--------------DGQSLFLGGLA 265
Query: 399 RIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDR 458
RID ++ L Y L ++ +KADE +K G L PP G++ A+ +
Sbjct: 266 RIDFVRG-ERQPLIVYADNDLYIHRTKLEKADEVMEKHHGTLLVPPTGEEAAKALPPFVK 324
Query: 459 ERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVE 518
K T +D+ ISGLGW+S++ E + VH PK V
Sbjct: 325 HTFKINKSTMT----TDIVISGLGWVSIQ---------------GKHEASVVVHAPKGVS 365
Query: 519 VFVR 522
V +R
Sbjct: 366 VGMR 369
>gi|315641160|ref|ZP_07896238.1| GTP-binding protein [Enterococcus italicus DSM 15952]
gi|315483084|gb|EFU73602.1| GTP-binding protein [Enterococcus italicus DSM 15952]
Length = 375
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 122/386 (31%), Positives = 190/386 (49%), Gaps = 46/386 (11%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG +QT++ + GY E K + + + C RC L H + I V
Sbjct: 13 CIGCGVTIQTTDPNELGYTPKAAIE---KGLENEEMYCQRCFRLRHYNEIQDVA------ 63
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ ++ + L+ + + ALIV +VDI DFNGS + + G NPII+V KVD+
Sbjct: 64 -----LTDNDFLQLLNEIGKTDALIVNVVDIFDFNGSLIPGLHRFVGDNPIIMVGNKVDV 118
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W+ E ++ L + V LTS+K I + + I++ +KGRDVYI+G
Sbjct: 119 LPKSLKKPKLIQWMKERAFEEGLRPVEVLLTSAKKNQEITRLLATIEQYRKGRDVYIVGV 178
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS IN ++++ A K S PGTTL I+I G + DTPG
Sbjct: 179 TNVGKSTLINQIIQQ--------ATGVKELITTSRFPGTTLDKIEI-PLEDGAVMIDTPG 229
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ H+ A + +DL +APQ ++ +++ + + T+F GG+ R
Sbjct: 230 IIHRHQMAHYLGKKDLKIVAPQKEIKPKTYQLQPQQ--------------TLFLGGIARF 275
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D +K ++ T Y L ++ +KAD FY+K +G L PP + AE
Sbjct: 276 DFIKG-EKSSFTAYLANDLLIHRTKLEKADAFYEKHVGRLLQPPAEDELAE------FPE 328
Query: 461 LLEIKFEDTERPASDVAISGLGWISV 486
L+ +F ER SD+ +GLGWI++
Sbjct: 329 LVRFEFSIKER--SDLVFAGLGWITI 352
>gi|409387283|ref|ZP_11239523.1| GTP-binding protein YqeH, required for biogenesis of 30S ribosome
subunit [Lactococcus raffinolactis 4877]
gi|399205590|emb|CCK20438.1| GTP-binding protein YqeH, required for biogenesis of 30S ribosome
subunit [Lactococcus raffinolactis 4877]
Length = 378
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 128/387 (33%), Positives = 186/387 (48%), Gaps = 48/387 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT + DA GY E K + + C RC L H + I AV
Sbjct: 16 CIGCGAEIQTVDKDAMGYTPKSALE---KGLETGELYCQRCFRLRHYNEIAAVN------ 66
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
+S DE L+ + AL+V +VDI DFNGS + + N ++LV K D+
Sbjct: 67 -----ISDDEFLRLLTEVGNTNALVVNVVDIFDFNGSVIPGLHRFVAGNDVLLVGNKRDI 121
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + V +W+ E ++ L + V LTS+ + + + EI+ ++GRDVY++G
Sbjct: 122 LPKSVKESKVRNWLRERAHEEGLRPVDVVLTSAYNRDDTLDLVDEIENYREGRDVYVVGV 181
Query: 281 ANVGKSAFINALLKK-MGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA++K G+ D S PGTTL I+I G + DTP
Sbjct: 182 TNVGKSTLINAIIKNATGDSDVITT---------SRFPGTTLDKIEI-PLDDGSFIIDTP 231
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + EDL ++P+ ++ +++ + NE G T+F GGL R
Sbjct: 232 GIIHRHQMAHFIGPEDLKLVSPKKEIKPKTYQL-------NE-------GQTLFMGGLAR 277
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D LK + F+ L ++ +KADEFY K G L PP A K + +E
Sbjct: 278 FDYLKGDKQGFTGFF-DNHLMIHRTKLEKADEFYVKHKGSLLVPPREADMATFPKLVRKE 336
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
++ K SD+ SGLGWI V
Sbjct: 337 FTIKGK--------SDIVFSGLGWIRV 355
>gi|329770262|ref|ZP_08261651.1| ribosome biogenesis GTPase YqeH [Gemella sanguinis M325]
gi|328836966|gb|EGF86612.1| ribosome biogenesis GTPase YqeH [Gemella sanguinis M325]
Length = 372
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 127/433 (29%), Positives = 209/433 (48%), Gaps = 76/433 (17%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG +Q+ + GY+ + E K + Q ++C RC L + + ++ V
Sbjct: 7 CIGCGVEIQSEDPKKQGYLPKNVVE-KSEDSQ---LVCKRCFRLKNYNEVSDVE------ 56
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGAN-PIILVVTKVD 219
+ AD+ + + L ++ ALI K+VDI DF+GS++ + D+ G N I+L+ K+D
Sbjct: 57 -----LGADDFYQLIKSLSKKDALIAKVVDIFDFSGSWIEDVVDIVGNNKDIVLIANKLD 111
Query: 220 LLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILG 279
LLPK N + W+ + +K + V + L S+ G+ A + + + G+DVYI+G
Sbjct: 112 LLPKSVKQNKIKQWLFKVLKEKGIKVKDILLVSAIKNQGVEEAAVRLDQLRNGKDVYIIG 171
Query: 280 SANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
+ NVGKS FIN L++ K S PGTTLG I+I +YDTP
Sbjct: 172 ATNVGKSTFINKLIE--------LTSGDKNVITTSHFPGTTLGMIEI-PLDRATSIYDTP 222
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ L + A + A+ L + P+ ++ + F + +E ++F+GG+ R
Sbjct: 223 GIILDYDIAHYLDAKSLKLVMPKKEIKARIFQLNAEQ--------------SLFFGGMAR 268
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPP-------IGKQKAEG 452
+D +K ++ T Y ++++ AD ++K LG L PP GKQ +
Sbjct: 269 MDFVKGERQS-FTLYASNLVEIHRTKLSNADALFEKHLGQMLKPPFEDNISIFGKQVRKS 327
Query: 453 WKGLDRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVH 512
+K +R+ +D+ ISGLGWI+V NSD SG + +
Sbjct: 328 FKIDNRK--------------TDIVISGLGWITV--------NSD------SG-CKIDIL 358
Query: 513 VPKPVEVFVRNPM 525
VP+ +EVFVR +
Sbjct: 359 VPEEIEVFVRESI 371
>gi|149183162|ref|ZP_01861611.1| YqeH [Bacillus sp. SG-1]
gi|148849145|gb|EDL63346.1| YqeH [Bacillus sp. SG-1]
Length = 371
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 131/426 (30%), Positives = 196/426 (46%), Gaps = 67/426 (15%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG +QT + + GY P + E ++ ++C RC L H + + V
Sbjct: 11 CTGCGVGIQTEDKEELGYAPPSSLEKEE-------IVCQRCFRLKHYNEVQDVS------ 57
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ + L+ + + + LIVK+VDI DFNGS+L + G NP++L+ KVDL
Sbjct: 58 -----LTDDDFLKILNEIGKGEGLIVKVVDIFDFNGSWLPGLHRFVGNNPVLLIGNKVDL 112
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + + +W+ + L + V L S++ I I++ + GR VY++G
Sbjct: 113 LPKSVKPSKLINWMKFQAKQLGLKPVDVKLMSAEKGQYIEEAVEAIEQYRDGRSVYVVGC 172
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS FIN ++ + GE+D S PGTTL I+I G L DTP
Sbjct: 173 TNVGKSTFINRVIHHVTGEKDIITT---------SHFPGTTLDMIEI-PLDDGEALIDTP 222
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ HH+ A V DL + P+ ++ + F + NE G T+F+GGL R
Sbjct: 223 GIINHHQMAHYVDKRDLKYITPKKEIKPKVFQL-------NE-------GQTLFFGGLSR 268
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D L Y L ++ DKADE Y+ GV L PP E
Sbjct: 269 FDYLSG-GRRSFVCYLSNELNIHRTKVDKADELYENHAGVMLQPPRKDDMGE------FP 321
Query: 460 RLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVEV 519
L+ +F E +D+ SGLGW+++ +I A HVPK V V
Sbjct: 322 ELVRHEFRVKE-GKTDIVFSGLGWVTINDPGATI----------------AAHVPKGVSV 364
Query: 520 FVRNPM 525
F+R +
Sbjct: 365 FLRKSL 370
>gi|331701565|ref|YP_004398524.1| ribosome biogenesis GTPase YqeH [Lactobacillus buchneri NRRL
B-30929]
gi|329128908|gb|AEB73461.1| ribosome biogenesis GTPase YqeH [Lactobacillus buchneri NRRL
B-30929]
Length = 378
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 127/394 (32%), Positives = 191/394 (48%), Gaps = 47/394 (11%)
Query: 94 VNSAVASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAV 153
V+ V C GCGA +QT++ +A GY P++ KK + V C RC L H + I V
Sbjct: 8 VDGEVVHCVGCGAAVQTTDKNALGYT-PES--ALKKGLENGEVYCQRCFRLRHYNEIAPV 64
Query: 154 GGNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIIL 213
+S D+ + L+ + +LIV +VDI D NGS + + G NP++L
Sbjct: 65 S-----------LSDDDFLKLLTSISDTDSLIVYVVDIFDVNGSLIPGLHRFVGNNPVLL 113
Query: 214 VVTKVDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGR 273
V K+D+LPK N V DW+ + + + V L S+K+ I + +I+K ++G+
Sbjct: 114 VGNKLDILPKALKHNKVKDWLRQQANAAGIRPIDVELISAKTNFDIDRLLDQIEKYRQGK 173
Query: 274 DVYILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGG 333
DVY++G NVGKS IN+++++ + K S PGTTL I I G
Sbjct: 174 DVYVVGVTNVGKSTLINSIVRQ--------STGIKELITTSRFPGTTLDRIDI-PLNDGH 224
Query: 334 KLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLN-GFTI 392
L DTPG+ + A + ++L + PQ ++ K + LN G T+
Sbjct: 225 NLVDTPGIIQPEQMAHHLSGKELNLVTPQKTIKP---------------KGYQLNPGQTL 269
Query: 393 FWGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEG 452
F+GG+ R D T Y +L ++ + ADEFY +G LTPP QKA
Sbjct: 270 FFGGVARFDYNSGEKRHGFTVYAENNLFIHRTKLENADEFYATHVGSFLTPPTEDQKA-- 327
Query: 453 WKGLDRERLLEIKFEDTERPASDVAISGLGWISV 486
D L F+ TE+ SD+ I GLGW++V
Sbjct: 328 ----DFPALEPHAFKSTEK--SDLVIEGLGWVTV 355
>gi|125717436|ref|YP_001034569.1| GTP-binding protein YqeH [Streptococcus sanguinis SK36]
gi|125497353|gb|ABN44019.1| Conserved GTPase, putative [Streptococcus sanguinis SK36]
Length = 368
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 126/392 (32%), Positives = 193/392 (49%), Gaps = 49/392 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGAP+QT + GY E K + + C RC L H + I+ V
Sbjct: 6 CIGCGAPIQTEDKGKLGYTPQSALE---KGLETGELYCQRCFRLRHYNEISDV------- 55
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
Q D LR L + AL+V +VDI DFNGS + + N ++LV K D+
Sbjct: 56 ---QLTDDDFLR-LLHEVGDSDALVVNVVDIFDFNGSVIPGLPRFVAGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + V W+ E ++ L + V LTS+++ I + +I+ +KGRDVY++G
Sbjct: 112 LPKSVKDSKVTQWLTERAHEEGLRPVDVVLTSAQNKQAIKDLIDKIEHCRKGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G++D S PGTTL I+I G +YDTP
Sbjct: 172 TNVGKSTLINAIIQEITGDKDIITT---------SRFPGTTLDKIEI-PLADGSHIYDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + A++L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLSAKNLKYISPKKEIKPKTYQLNPEQ--------------TLFLGGLGR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + T Y L+++ + A +FY K +G L PP+GK+K E + L
Sbjct: 268 FDFV-AGDKQGFTAYFDNELKLHRTKLEGASDFYDKHVGSLLVPPVGKEKEE-FPAL--- 322
Query: 460 RLLEIKFEDTERPASDVAISGLGWISVE-PVR 490
+K E T + +D+ SGLGWI V P R
Sbjct: 323 ----VKHEFTIKDKTDIVFSGLGWIRVSGPAR 350
>gi|422860728|ref|ZP_16907372.1| GTP-binding protein [Streptococcus sanguinis SK330]
gi|327469111|gb|EGF14583.1| GTP-binding protein [Streptococcus sanguinis SK330]
Length = 368
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 126/392 (32%), Positives = 193/392 (49%), Gaps = 49/392 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGAP+QT + GY E K + + C RC L H + I+ V
Sbjct: 6 CIGCGAPIQTEDKGKLGYTPQSALE---KGLETGELYCQRCFRLRHYNEISDV------- 55
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
Q D LR L + AL+V +VDI DFNGS + + N ++LV K D+
Sbjct: 56 ---QLTDDDFLR-LLHEVGDSDALVVNVVDIFDFNGSVIPGLPRFVAGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + V W+ E ++ L + V LTS+++ I + +I+ +KGRDVY++G
Sbjct: 112 LPKSVKDSKVTQWLTERAHEEGLRPVDVVLTSAQNKQAIKDLIDKIEHCRKGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G++D S PGTTL I+I G +YDTP
Sbjct: 172 TNVGKSTLINAIIQEITGDKDIITT---------SRFPGTTLDKIEI-PLADGSHIYDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + A++L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLSAKNLKYISPKKEIKPKTYQLNPEQ--------------TLFLGGLGR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + T Y L+++ + A +FY K +G L PP+GK+K E + L
Sbjct: 268 FDFV-AGDKQGFTAYFDNELKLHRTKLEGASDFYDKHVGSLLVPPVGKEKEE-FPAL--- 322
Query: 460 RLLEIKFEDTERPASDVAISGLGWISVE-PVR 490
+K E T + +D+ SGLGWI V P R
Sbjct: 323 ----VKHEFTIKDKTDIVFSGLGWIRVSGPAR 350
>gi|357235992|ref|ZP_09123335.1| GTP-binding protein [Streptococcus criceti HS-6]
gi|356883974|gb|EHI74174.1| GTP-binding protein [Streptococcus criceti HS-6]
Length = 368
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 128/426 (30%), Positives = 205/426 (48%), Gaps = 65/426 (15%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +Q+ + +APGY + E K + + C RC L H + I V
Sbjct: 6 CIGCGAKIQSQDKEAPGYTPQSSIE---KSQETGELYCQRCFRLRHYNEIVDVA------ 56
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
+S D+ + L + ALI+ +VDI DFNGS + + N ++LV K D+
Sbjct: 57 -----ISDDDFLKLLHEVGDSDALILNVVDIFDFNGSVIPSLSRFVAGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK V W+ E ++ L + V LTS+++ I + + I+K + GRDVY++G
Sbjct: 112 LPKSVKNGKVTQWLTERAHEEGLRPVDVLLTSAQNGQAIKELIARIEKLRAGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA++K++ G+++ S PGTTL I+I G ++DTP
Sbjct: 172 TNVGKSTLINAIIKEITGDQEVITT---------SRFPGTTLDKIEI-PLDDGAYIFDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + A+DL ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLSAKDLKFVSPKKEIKPKTYQLNPEQ--------------TLFLGGLGR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D ++ + T Y +L+++ + AD+FY K G LTPP K+ A +
Sbjct: 268 FDFVEG-DKQGFTAYFDNNLKLHRTKLEGADDFYLKHAGSLLTPPSAKEVA------NFP 320
Query: 460 RLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVEV 519
+L+ +F T + +DV SGLGW+ V +G +A P+ V V
Sbjct: 321 KLVRHEFTITGK--TDVVFSGLGWVRV-----------------NGSARVAAWAPEGVGV 361
Query: 520 FVRNPM 525
VR +
Sbjct: 362 MVRKAI 367
>gi|224476705|ref|YP_002634311.1| GTP-binding protein YqeH [Staphylococcus carnosus subsp. carnosus
TM300]
gi|222421312|emb|CAL28126.1| conserved hypothetical protein [Staphylococcus carnosus subsp.
carnosus TM300]
Length = 366
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 131/428 (30%), Positives = 205/428 (47%), Gaps = 72/428 (16%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGAPLQ+ + PGYV + L K+ V+C RC L + + + VG
Sbjct: 7 CIGCGAPLQSEDPKKPGYVP--AHSLHKE-----DVICQRCFRLKNYNEVQDVG------ 53
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
+ +++ + L++L +K L+V + DI DF GSF+ ++ + G +IL K+DL
Sbjct: 54 -----MDSEDFLDLLNNLADKKGLVVNVCDIFDFEGSFIHALKRIVGNKKVILAANKIDL 108
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + V +W+ + K L+ +V L S++ GI + I K + DVYI+G+
Sbjct: 109 LPKQINKRRVKEWLKKTAKKYGLDPEAVILLSAQKGYGIDELLEAIDKYRNHEDVYIVGT 168
Query: 281 ANVGKSAFINALLK-KMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS IN L++ +GE+D S PGTTL I I ++DTP
Sbjct: 169 TNVGKSTLINKLIEHSVGEKDVVTT---------SRFPGTTLDMIDI-PLDENTFMFDTP 218
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ V ++L + P ++ + + + NE + T+F+GGL R
Sbjct: 219 GIIQEHQMTHYVSDKELKQIMPNKEIKQRVYQL-------NENQ-------TLFFGGLAR 264
Query: 400 IDLLK--VLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLD 457
ID + P C Y +L ++ T+KAD +Q +LG LTPP D
Sbjct: 265 IDYVSGGKRPLVC---YFSNNLNIHRTKTEKADTLWQTQLGNLLTPP------NHSDHFD 315
Query: 458 RERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPV 517
+ ++ E T + DV ISGLG+I++ P + + VHVPK V
Sbjct: 316 LNDIKAVRLE-TGKEKRDVMISGLGFITIGPGAK-----------------VVVHVPKSV 357
Query: 518 EVFVRNPM 525
+V +RN +
Sbjct: 358 DVVLRNSI 365
>gi|89100814|ref|ZP_01173666.1| GTP-binding protein [Bacillus sp. NRRL B-14911]
gi|89084460|gb|EAR63609.1| GTP-binding protein [Bacillus sp. NRRL B-14911]
Length = 367
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 132/427 (30%), Positives = 198/427 (46%), Gaps = 69/427 (16%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG +QT + GY E + ++C RC L H + + V
Sbjct: 7 CIGCGVKVQTENPEELGYAPKSALEKE-------AIVCQRCFRLKHYNEVQDVS------ 53
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ + L+ + R ALIVK+VDI DFNGS+L + G N ++LV K DL
Sbjct: 54 -----LTDDDFLKILNEIGRSDALIVKIVDIFDFNGSWLPGLHRFTGNNKVLLVGNKADL 108
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK N + +W+ + + L V L S+ I VAS I + ++G+DVY++G
Sbjct: 109 LPKSVKRNKLINWMKQESKNLGLRPEDVFLVSAAKGQSIQEVASAIDEYREGKDVYVVGC 168
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS FIN +LK++ GE D S PGTTL I+I G L DTP
Sbjct: 169 TNVGKSTFINRILKEVTGEGDIITT---------SHFPGTTLDIIEI-PLEDGKALVDTP 218
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ HH+ A V D + P+ ++ + + + NE G T+F+GGL R
Sbjct: 219 GIINHHQMAHFVDKRDFKVIMPKKEIKPKVYQL-------NE-------GQTLFFGGLAR 264
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + + + + ++ + ADE Y+K G LTPP +Q E + L R
Sbjct: 265 FDFISGSRQAFIC-HVSNEINIHRTKLENADELYEKHAGEMLTPPRPEQMDE-FPELVRH 322
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV-EPVRRSIRNSDINLESTSGELHLAVHVPKPVE 518
+ +D+ ISGLGW++V EP + +A +VPK V+
Sbjct: 323 EFT------VKEGKTDIVISGLGWVTVSEPGTK-----------------VAAYVPKGVQ 359
Query: 519 VFVRNPM 525
VR +
Sbjct: 360 AMVRKSL 366
>gi|339634961|ref|YP_004726602.1| GTPase YqeH [Weissella koreensis KACC 15510]
gi|338854757|gb|AEJ23923.1| GTPase YqeH [Weissella koreensis KACC 15510]
Length = 380
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 127/426 (29%), Positives = 201/426 (47%), Gaps = 64/426 (15%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT D PG V KK + VLC RC L H + I V
Sbjct: 17 CIGCGAEIQT---DRPGEVGYTPMSALKKGFENGEVLCQRCFRLRHYNEIQPVD------ 67
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ R L + +L+V ++D+ DF+GS + + G+NP++LV KVD+
Sbjct: 68 -----LTDDDFRRLLDQISTTDSLVVYVMDVFDFSGSLIPGLHRFVGSNPVLLVGNKVDI 122
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LP + +W+ + + L + + LTS K+ + + I+K + GR VY++G
Sbjct: 123 LPHALRRAKIKEWMRQQANRAGLRPIDIALTSGKNGDDVPALLDMIEKYRAGRSVYVVGV 182
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS IN ++K + GE++ S PGTTL I+I + + DTP
Sbjct: 183 TNVGKSTLINQIIKDVTGEKNDVITT--------SRFPGTTLDRIEI-SLDDQSNIIDTP 233
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ + A + +DL ++PQ L+ +++ + +E T+F G + R
Sbjct: 234 GIIHPDQMAHYLTPQDLKYVSPQKELKPRTYQLNAEQ--------------TLFMGAMAR 279
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D ++ P++ +T Y +L ++ D AD+FY K GV LTPP K E L R
Sbjct: 280 FDFIQG-PKSGITAYFENNLPIHRTKLDNADQFYAKHAGVLLTPP-EKVNLEDLPPLKRH 337
Query: 460 RLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVEV 519
+F+ TE+ +D+ I GLGW++V G++ +A PK V V
Sbjct: 338 -----EFKTTEK--TDIVIDGLGWVTV-----------------PGQVVVAAWAPKGVSV 373
Query: 520 FVRNPM 525
R M
Sbjct: 374 LTRKAM 379
>gi|398307026|ref|ZP_10510612.1| GTPase YqeH [Bacillus vallismortis DV1-F-3]
Length = 366
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 132/428 (30%), Positives = 199/428 (46%), Gaps = 71/428 (16%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG +QT + GY P + L K++ V+C RC L + + I V
Sbjct: 6 CIGCGVTIQTEDKSGLGYAPPAS--LTKEN-----VICQRCFRLKNYNEIQDVS------ 52
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ L + +L+VK+VDI DFNGS++ ++ L G NP++LV K D+
Sbjct: 53 -----LTDDDFLNILHGIGETDSLVVKIVDIFDFNGSWINGLQRLVGGNPVLLVGNKADI 107
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W+ + L + V L S+ GI V I+ + +DVY++G
Sbjct: 108 LPKSLKRERLIQWMKREAKELGLKPVDVFLVSAGRGQGIREVIDAIEHYRNDKDVYVVGC 167
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS FIN ++K++ GE D S PGTTL I+I G LYDTP
Sbjct: 168 TNVGKSTFINRIIKEVSGEEDIITT---------SQFPGTTLDAIEI-PLDDGSALYDTP 217
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ HH+ A V+ +DL L+P+ L+ ++F + + T+++GGL R
Sbjct: 218 GIINHHQMAHYVNKKDLKILSPKKELKPRTFQLNDQQ--------------TLYFGGLAR 263
Query: 400 IDLL--KVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLD 457
D + + P C Y P L ++ + AD Y+K G LTPP GK + + L
Sbjct: 264 FDYVSGERAPFIC---YMPNELMIHRTKLENADALYEKHAGELLTPP-GKDEMGEFPEL- 318
Query: 458 RERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPV 517
IK + T D+ SGLGW++V + + + PK V
Sbjct: 319 VAHTFTIKDKKT-----DIVFSGLGWVTVHDADKKV----------------TAYAPKGV 357
Query: 518 EVFVRNPM 525
VFVR +
Sbjct: 358 HVFVRRSL 365
>gi|319939798|ref|ZP_08014154.1| GTP-binding protein [Streptococcus anginosus 1_2_62CV]
gi|319811011|gb|EFW07326.1| GTP-binding protein [Streptococcus anginosus 1_2_62CV]
Length = 368
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 126/387 (32%), Positives = 190/387 (49%), Gaps = 48/387 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGAP+QT D GY E K + + C RC L H + IT V
Sbjct: 6 CIGCGAPIQTKYKDKLGYTPQSALE---KGLETGELYCQRCFRLRHYNEITDV------- 55
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
Q D LR L + AL+V +VDI DFNGS + + N ++LV K D+
Sbjct: 56 ---QLTDDDFLR-LLHEVGDSNALVVNVVDIFDFNGSIIPGLPRFVVGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + V W+ E ++ L + V LTS+++ I + +I+ +KGRDVY++G
Sbjct: 112 LPKSVKTSKVAQWLTERAHEEGLRPVDVVLTSAQNKQAIKELIEKIEHYRKGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G+++ S PGTTL I+I G +YDTP
Sbjct: 172 TNVGKSTLINAIIQEITGDKEVITT---------SRFPGTTLDKIEI-PLADGSHIYDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + A++L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLSAKNLKYISPKKEIKPKTYQLNPEQ--------------TLFLGGLGR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + T Y L+++ +A EFY+K +G LTPP K+ A+ K + E
Sbjct: 268 FDFVSG-DKQGFTAYFDNELKLHRTKLARAGEFYEKHVGSLLTPPSKKEVADFPKLVKHE 326
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
+E K +DV SGLGWI V
Sbjct: 327 LKIEAK--------TDVVFSGLGWIRV 345
>gi|420160958|ref|ZP_14667729.1| GTP-binding protein [Weissella koreensis KCTC 3621]
gi|394745708|gb|EJF34526.1| GTP-binding protein [Weissella koreensis KCTC 3621]
Length = 380
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 127/426 (29%), Positives = 201/426 (47%), Gaps = 64/426 (15%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT D PG V KK + VLC RC L H + I V
Sbjct: 17 CIGCGAEIQT---DRPGEVGYTPMSALKKGFENGEVLCQRCFRLRHYNEIQPVD------ 67
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ R L + +L+V ++D+ DF+GS + + G+NP++LV KVD+
Sbjct: 68 -----LTDDDFRRLLDQISTTDSLVVYVMDVFDFSGSLIPGLHRFVGSNPVLLVGNKVDI 122
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LP + +W+ + + L + + LTS K+ + + I+K + GR VY++G
Sbjct: 123 LPHALRRAKIKEWMRQQANRAGLRPIDIALTSGKNGDDVPALLDMIEKYRAGRSVYVVGV 182
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS IN ++K + GE++ S PGTTL I+I + + DTP
Sbjct: 183 TNVGKSTLINQIIKDVTGEKNDVITT--------SRFPGTTLDRIEI-SLDDQSNIIDTP 233
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ + A + +DL ++PQ L+ +++ + +E T+F G + R
Sbjct: 234 GIIHPDQMAHYLTPQDLKYVSPQKELKPRTYQLNAEQ--------------TLFMGAMAR 279
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D ++ P++ +T Y +L ++ D AD+FY K GV LTPP K E L R
Sbjct: 280 FDFIQG-PKSGITAYFENNLPIHRTKLDNADQFYVKHAGVLLTPP-EKVNLEDLPPLKRH 337
Query: 460 RLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVEV 519
+F+ TE+ +D+ I GLGW++V G++ +A PK V V
Sbjct: 338 -----EFKTTEK--TDIVIDGLGWVTV-----------------PGQVVVAAWAPKGVSV 373
Query: 520 FVRNPM 525
R M
Sbjct: 374 LTRKAM 379
>gi|414157031|ref|ZP_11413331.1| ribosome biogenesis GTPase YqeH [Streptococcus sp. F0442]
gi|410868347|gb|EKS16312.1| ribosome biogenesis GTPase YqeH [Streptococcus sp. F0442]
Length = 368
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 129/426 (30%), Positives = 206/426 (48%), Gaps = 65/426 (15%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGAP+QT + GY E K + V C RC L H + IT V
Sbjct: 6 CIGCGAPIQTENKEGLGYTPQSALE---KGLETGEVYCQRCFRLRHYNEITDV------- 55
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ + L + AL+V +VDI DFNGS + + N ++LV K D+
Sbjct: 56 ----HLTDDDFLKLLHEVGDSDALVVNVVDIFDFNGSVIPGLPRFVAGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + V W++E ++ + + V LTS+++ + I + +I++ +KGRDVY++G
Sbjct: 112 LPKSVKDSKVTHWLMERAHEEGMRPVDVVLTSAQNKSAIKDLMEKIEQYRKGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G++D S PGTTL I+I G +YDTP
Sbjct: 172 TNVGKSTLINAIIQEITGDKDIITT---------SRFPGTTLDKIEI-PLDDGSYIYDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + A++L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLTAKNLKYVSPKKEIKPKTYQLNPEQ--------------TLFLGGLGR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D +K + F+ L+++ + A FY K +G LTPP K+K E + L
Sbjct: 268 FDFIKGEKQGFTAFFD-NELKLHRTKLEGATAFYDKHVGGLLTPPNSKEKEE-FPPL--- 322
Query: 460 RLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVEV 519
+ E T + +D+ ISGLGWI V +G+ +AV P+ V V
Sbjct: 323 ----VSHEFTIKDKTDLVISGLGWIRV-----------------NGKAKVAVWAPEGVTV 361
Query: 520 FVRNPM 525
R +
Sbjct: 362 VTRKAI 367
>gi|423069216|ref|ZP_17058003.1| ribosome biogenesis GTPase YqeH [Streptococcus intermedius F0395]
gi|355365104|gb|EHG12830.1| ribosome biogenesis GTPase YqeH [Streptococcus intermedius F0395]
Length = 368
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 125/387 (32%), Positives = 190/387 (49%), Gaps = 48/387 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGAP+QT D GY E K + + C RC L H + IT V
Sbjct: 6 CIGCGAPIQTKYKDRLGYTPQSALE---KGMETGELYCQRCFRLRHYNEITDV------- 55
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
Q D LR L + AL+V +VDI DFNGS + + N ++LV K D+
Sbjct: 56 ---QLTDDDFLR-LLHEVGDSNALVVNVVDIFDFNGSVIPGLPRFVAGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK N V W+ E ++ L + V LTS+++ I + +I++ +KGRDVY++G
Sbjct: 112 LPKSVKSNKVTQWLTERAHEEGLRPIDVVLTSAQNKQAIKELMEKIEQYRKGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G+++ S PGTTL I+I G +YDTP
Sbjct: 172 TNVGKSTLINAIIQEITGDKEVITT---------SRFPGTTLDKIEI-PLADGSHIYDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + A++L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLSAKNLKYISPKKEIKPKTYQLNPEQ--------------TLFLGGLGR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + T Y L+++ A EFY+K +G LTPP K+ ++ + + E
Sbjct: 268 FDFVSG-NKQGFTAYFDNELKLHRTRLAGAGEFYEKHVGSLLTPPSKKEVSDFPQLVKHE 326
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
+E K +DV SGLGWI V
Sbjct: 327 LKIEAK--------TDVVFSGLGWIRV 345
>gi|22537804|ref|NP_688655.1| GTP-binding protein YqeH [Streptococcus agalactiae 2603V/R]
gi|76786933|ref|YP_330278.1| GTP-binding protein YqeH [Streptococcus agalactiae A909]
gi|77406588|ref|ZP_00783636.1| GTP-binding protein [Streptococcus agalactiae H36B]
gi|406710043|ref|YP_006764769.1| GTP-binding protein YqeH [Streptococcus agalactiae GD201008-001]
gi|424048892|ref|ZP_17786443.1| GTPase YqeH [Streptococcus agalactiae ZQ0910]
gi|22534697|gb|AAN00528.1|AE014267_11 GTP-binding protein [Streptococcus agalactiae 2603V/R]
gi|76561990|gb|ABA44574.1| GTP-binding protein [Streptococcus agalactiae A909]
gi|77174813|gb|EAO77634.1| GTP-binding protein [Streptococcus agalactiae H36B]
gi|389649661|gb|EIM71137.1| GTPase YqeH [Streptococcus agalactiae ZQ0910]
gi|406650928|gb|AFS46329.1| GTP-binding protein YqeH [Streptococcus agalactiae GD201008-001]
Length = 372
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 123/388 (31%), Positives = 189/388 (48%), Gaps = 48/388 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT DA GY E K + + C RC L H + IT V
Sbjct: 6 CIGCGARIQTENKDAAGYTPRAALE---KGLETGELYCQRCFRLRHYNEITDV------- 55
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ DE + L + AL+V ++DI DFNGS + + N ++LV K D+
Sbjct: 56 ----HITDDEFLKLLHEVGDSDALVVNVIDIFDFNGSIIPGLSRFVAGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK V W+ E ++ L + V LTS+++ I + I+K + G+DVY++G
Sbjct: 112 LPKSVKDGKVTQWLTERAHEEGLRPVDVILTSAQNHHAIKDLIDTIEKYRHGQDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G RD S PGTTL I+I G ++DTP
Sbjct: 172 TNVGKSTLINAIIREITGSRDVITT---------SRFPGTTLDKIEI-PLDDGSYIFDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + A++L ++P+ ++ +++ + SE T+F GL R
Sbjct: 222 GIIHRHQMAHYLTAKNLKYVSPKKEIKPKTYQLNSEQ--------------TLFLAGLAR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + T Y +L ++ ADEFY K +G LTPP GK+ + D
Sbjct: 268 FDFISGQKQG-FTAYFDNNLNLHRTKLVGADEFYTKHVGKLLTPPTGKEVS------DFP 320
Query: 460 RLLEIKFEDTERPASDVAISGLGWISVE 487
+L ++ E T + D+ SGLGWI V+
Sbjct: 321 KL--VRHEFTIKDKMDIVYSGLGWIRVK 346
>gi|377831709|ref|ZP_09814679.1| GTP-binding protein YqeH [Lactobacillus mucosae LM1]
gi|377554503|gb|EHT16212.1| GTP-binding protein YqeH [Lactobacillus mucosae LM1]
Length = 371
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 132/388 (34%), Positives = 193/388 (49%), Gaps = 49/388 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT++ D GY P++ KK + + C RC L H + I V
Sbjct: 8 CIGCGAIIQTTDPDGLGYT-PNSA--LKKGLETGELYCQRCFRLRHYNEIAPVS------ 58
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGA-NPIILVVTKVD 219
++ D+ L+H+R ALIV +VDI DFNGS + + G NP++LV K D
Sbjct: 59 -----LTDDDFLRLLNHIRDAHALIVYVVDIFDFNGSLIPGLHRFVGNDNPVLLVGNKED 113
Query: 220 LLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILG 279
+LP+ + DW+ + L + L S+K I + +EI+K + RDVY++G
Sbjct: 114 VLPRSLRRRKLTDWLRQQANLAGLRPIDTLLVSAKKNHQIDQLLAEIEKHRADRDVYVVG 173
Query: 280 SANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDT 338
NVGKS INA++K+ G +D S PGTTL I+I G KL DT
Sbjct: 174 VTNVGKSTLINAIIKQQTGVQDLITT---------SRFPGTTLDKIEI-PLDDGHKLVDT 223
Query: 339 PGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLV 398
PG+ + A V+ A+DL +APQ ++ ++F + N+ + TIF GG+
Sbjct: 224 PGIIHQEQMAHVLSAKDLKIVAPQKEIKPRTFQL-------NDSQ-------TIFLGGVA 269
Query: 399 RIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDR 458
R D +K P + Y SL ++ ADEFY K G LTPP + A+ + L+R
Sbjct: 270 RFDYVKG-PHAGIVAYFENSLPLHRTKLVNADEFYAKHCGDLLTPPTSDEMAD-FPPLER 327
Query: 459 ERLLEIKFEDTERPASDVAISGLGWISV 486
+F E+ SD+ GLGWI+V
Sbjct: 328 H-----EFAIKEK--SDLVFEGLGWITV 348
>gi|323490035|ref|ZP_08095256.1| GTPase YqeH [Planococcus donghaensis MPA1U2]
gi|323396331|gb|EGA89156.1| GTPase YqeH [Planococcus donghaensis MPA1U2]
Length = 367
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 128/427 (29%), Positives = 196/427 (45%), Gaps = 65/427 (15%)
Query: 96 SAVASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGG 155
S + +C GCG +QT + GY P + E ++ ++C RC L + + + V
Sbjct: 2 SEMPTCIGCGVQIQTENKEEVGYAPPSSLEKEE-------IICQRCFRLKNYNELQPVS- 53
Query: 156 NGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVV 215
++ D+ L+ L LIVK+VDI DFNGS+L + G N I+L+
Sbjct: 54 ----------LTDDDFLRILNGLGERDGLIVKIVDIFDFNGSWLPGLHRFVGNNDILLIA 103
Query: 216 TKVDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDV 275
K DLLPK + + W+ + K L + V S+ G+ I+K +KG+DV
Sbjct: 104 NKADLLPKSVKQHKLIHWMKQEARKLGLQPIDVLTVSAHRGTGVPEAMEAIEKYRKGKDV 163
Query: 276 YILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKL 335
Y++G NVGKS FIN ++K+ A Q S PGTTL I+I L
Sbjct: 164 YVVGCTNVGKSTFINRVIKQ--------ATGQSDVITTSHFPGTTLDMIEI-PLDDKRSL 214
Query: 336 YDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWG 395
+DTPG+ HH+ A + DL + P+ ++ + F + +E T+F G
Sbjct: 215 FDTPGIINHHQLAHHLKTADLKQIMPKKEIKPRVFQLNAEQ--------------TLFVG 260
Query: 396 GLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKG 455
GL R D +K + T + L ++ + AD Y++ LG L PP + K E +
Sbjct: 261 GLARFDFIKG-ERSSFTVHIANDLPIHRTKLENADALYEQHLGDMLAPPSAEYKDE-FPE 318
Query: 456 LDRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPK 515
L R E +D + +D+ SGLGWI+++ G +A H PK
Sbjct: 319 LVRH---EFSIKDAK---TDIVFSGLGWITIQ----------------HGNAVVAAHAPK 356
Query: 516 PVEVFVR 522
VEV +R
Sbjct: 357 GVEVLLR 363
>gi|358061220|ref|ZP_09147884.1| GTP-binding protein YqeH [Staphylococcus simiae CCM 7213]
gi|357256313|gb|EHJ06697.1| GTP-binding protein YqeH [Staphylococcus simiae CCM 7213]
Length = 366
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 128/433 (29%), Positives = 207/433 (47%), Gaps = 72/433 (16%)
Query: 96 SAVASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKT-VLCGRCRLLSHGHMITAVG 154
S + C GCGAPLQ+ + PGYV +H+ F+ V+C RC L + + + VG
Sbjct: 2 SEILKCIGCGAPLQSEDKSKPGYV--------PEHNMFRDDVICRRCFRLKNYNEVQDVG 53
Query: 155 GNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILV 214
+ +++ + LS L + +IV +VD+ DF GSF+ ++ + G IIL
Sbjct: 54 -----------LESEDFLKLLSGLANKSGIIVNVVDVFDFEGSFINAVKRIVGNKKIILA 102
Query: 215 VTKVDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRD 274
K+DLLPK + V +W+ K L + L S++ GI + S I K ++ D
Sbjct: 103 ANKLDLLPKQINKRRVKEWLKRTARKYGLEADDIVLISAEKGWGIEDLLSSIAKIRQHED 162
Query: 275 VYILGSANVGKSAFINALLK-KMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGG 333
VY++G+ NVGKS IN L++ +GE+D S PGTTL I I
Sbjct: 163 VYVVGTTNVGKSTLINKLIEASVGEKDVVTT---------SRFPGTTLDMIDI-PLDETT 212
Query: 334 KLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIF 393
+YDTPG+ H+ +V ++L + P+ ++ + + + NE + T+F
Sbjct: 213 FMYDTPGIIQDHQMTHIVTEKELKTIMPKKEIKQRVYQL-------NENQ-------TLF 258
Query: 394 WGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGW 453
+GGL RID + + F+ L ++ +KA+E ++ +LG LTPP
Sbjct: 259 FGGLARIDYISGGKRPLICFFA-NELNIHRTKLEKANELWKSQLGELLTPP------NNP 311
Query: 454 KGLDRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGE-LHLAVH 512
+ D + ++ E T + D+ ISGLG+I++ GE + V
Sbjct: 312 ENFDLSEVKAVRLE-TGKEKRDIMISGLGFITI------------------GEGAKVIVR 352
Query: 513 VPKPVEVFVRNPM 525
VPK V+V +RN +
Sbjct: 353 VPKNVDVILRNSI 365
>gi|407796155|ref|ZP_11143111.1| GTPase YqeH [Salimicrobium sp. MJ3]
gi|407019509|gb|EKE32225.1| GTPase YqeH [Salimicrobium sp. MJ3]
Length = 366
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 131/430 (30%), Positives = 194/430 (45%), Gaps = 75/430 (17%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT + A GY E + TV+C RC L H + +
Sbjct: 6 CAGCGAEIQTEDESAAGYAPKSALERE-------TVICKRCFRLKHYNEVQD-------- 50
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
D+ E L + +L+V+L+DI DFNGS + + L G NP+IL K+DL
Sbjct: 51 ---VDYDDDDFLEMLQQINDTDSLVVQLIDIFDFNGSLIPGLNRLTGNNPVILAANKMDL 107
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + N V W+ + L V VHL S+ + GI +A I++++ +DV+++G+
Sbjct: 108 LPKSVNLNKVEKWLRREAKEAGLLVEDVHLISASTNQGIDELAKAIEQKRSRKDVFVVGT 167
Query: 281 ANVGKSAFINALLKK-MGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS IN L+ + G +D S PGTTLG I I LYDTP
Sbjct: 168 TNVGKSTLINELINRSTGIKDAITT---------SYFPGTTLGFIDI-PLDDHSSLYDTP 217
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
GV H+ A V EDL + PQ ++ + + + E T+F+GGL R
Sbjct: 218 GVIQRHQLAHYVSDEDLKLITPQKEIKAKIYQLNEEQ--------------TLFFGGLAR 263
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGK--QKAEGWKGLD 457
+D +K + Y + ++ +KA + +G L PP K WK
Sbjct: 264 MDFVKG-EHSSFVCYLSNRIPIHRTKMEKAGHITENRIGEMLVPPDENSLSKLPQWK--- 319
Query: 458 RE--RLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPK 515
R+ R+ E K DV ISGLGWI + GE+ + +H P+
Sbjct: 320 RQTFRIPEGK--------HDVVISGLGWIMI----------------PEGEVTVHIHAPE 355
Query: 516 PVEVFVRNPM 525
V++ +R +
Sbjct: 356 GVKISLRESL 365
>gi|418963084|ref|ZP_13514926.1| ribosome biogenesis GTPase YqeH [Streptococcus anginosus subsp.
whileyi CCUG 39159]
gi|383343950|gb|EID22121.1| ribosome biogenesis GTPase YqeH [Streptococcus anginosus subsp.
whileyi CCUG 39159]
Length = 368
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 125/387 (32%), Positives = 191/387 (49%), Gaps = 48/387 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGAP+QT D GY E K + + C RC L H + IT V
Sbjct: 6 CIGCGAPIQTKYKDRLGYTPQSALE---KGMETGELYCQRCFRLRHYNEITDV------- 55
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
Q D LR L + AL+V +VDI DFNGS + + N ++LV K D+
Sbjct: 56 ---QLTDDDFLR-LLHEVGDSNALVVNVVDIFDFNGSVIPGLPRFVAGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + V W++E ++ L + V LTS+++ I + +I++ +KGRDVY++G
Sbjct: 112 LPKSVKTSKVTQWLMERAHEEGLRPVDVVLTSAQNKQAIKELIEKIEQYRKGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G+++ S PGTTL I+I G +YDTP
Sbjct: 172 TNVGKSTLINAIIQEITGDKEVITT---------SRFPGTTLDKIEI-PLADGSHIYDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + A++L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLSAKNLKYISPKKEIKPKTYQLNREQ--------------TLFLGGLGR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + T Y L+++ A EFY+K +G LTPP K+ A+ + + E
Sbjct: 268 FDFVSG-DKQGFTAYFDNELKLHRTKLAGAGEFYEKHVGSLLTPPSKKEVADFPQLVKHE 326
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
+E K +DV SGLGWI V
Sbjct: 327 LKIEAK--------TDVVFSGLGWIRV 345
>gi|406027117|ref|YP_006725949.1| GTP-binding protein [Lactobacillus buchneri CD034]
gi|405125606|gb|AFS00367.1| GTP-binding protein [Lactobacillus buchneri CD034]
Length = 378
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 126/394 (31%), Positives = 192/394 (48%), Gaps = 47/394 (11%)
Query: 94 VNSAVASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAV 153
V+ V C GCGA +QT++ +A GY P++ KK + V C RC L H + I V
Sbjct: 8 VDGEVVHCVGCGAAVQTTDKNALGYT-PES--ALKKGLENGEVYCQRCFRLRHYNEIAPV 64
Query: 154 GGNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIIL 213
+S D+ + L+ + +LIV +VDI D NGS + + G+NP++L
Sbjct: 65 S-----------LSDDDFLKLLTSISDTDSLIVYVVDIFDVNGSLIPGLHRFVGSNPVLL 113
Query: 214 VVTKVDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGR 273
V K+D+LPK N V DW+ + + + V L S+K+ I + +I+K ++G+
Sbjct: 114 VGNKLDILPKALKHNKVKDWLRQQANAAGIRPIDVELISAKTNFDIDRLLDQIEKYRQGK 173
Query: 274 DVYILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGG 333
DVY++G NVGKS IN+++++ + K S PGTTL I I G
Sbjct: 174 DVYVVGVTNVGKSTLINSIVRQ--------STGIKELITTSRFPGTTLDRIDI-PLNDGH 224
Query: 334 KLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLN-GFTI 392
L DTPG+ + A + ++L + PQ ++ K + LN G T+
Sbjct: 225 NLVDTPGIIQPEQMAHHLSGKELNLVTPQKTIKP---------------KGYQLNPGQTL 269
Query: 393 FWGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEG 452
F+ G+ R D T Y +L ++ + ADEFY +G LTPP QKA
Sbjct: 270 FFAGVARFDYNSGDKRHGFTVYAENNLFIHRTKLENADEFYATHVGSFLTPPTEDQKA-- 327
Query: 453 WKGLDRERLLEIKFEDTERPASDVAISGLGWISV 486
D L +F+ TE+ SD+ I GLGW++V
Sbjct: 328 ----DFPALEPHEFKSTEK--SDLVIEGLGWVTV 355
>gi|393200248|ref|YP_006462090.1| GTPase [Solibacillus silvestris StLB046]
gi|406667405|ref|ZP_11075163.1| hypothetical protein B857_02989 [Bacillus isronensis B3W22]
gi|327439579|dbj|BAK15944.1| predicted GTPase [Solibacillus silvestris StLB046]
gi|405384773|gb|EKB44214.1| hypothetical protein B857_02989 [Bacillus isronensis B3W22]
Length = 367
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 124/427 (29%), Positives = 196/427 (45%), Gaps = 65/427 (15%)
Query: 96 SAVASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGG 155
+ + C GCG +QT + + GY + E + ++C RC L + + I V
Sbjct: 2 NEMPQCIGCGTVIQTEDKNGLGYAPASSLEKE-------MIICQRCFRLKNYNEIQPVS- 53
Query: 156 NGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVV 215
++ D+ L+ L +++ LIVK+VDI DFNGS+L + G NP++LV
Sbjct: 54 ----------LTDDDFLRILNGLGQQQGLIVKIVDIFDFNGSWLPGLHRFVGNNPVLLVA 103
Query: 216 TKVDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDV 275
K DLLPK V +W+ L + V L S+ G+ V I++ + G+DV
Sbjct: 104 NKADLLPKSVKEKKVINWLKREAKALGLKPVDVKLVSAHKGLGMQEVVEAIEEYRNGKDV 163
Query: 276 YILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKL 335
Y++G NVGKS FIN ++K+ A + S PGTTL I I G L
Sbjct: 164 YVVGCTNVGKSTFINRIIKQ--------ATGEGEIITTSHFPGTTLDMIGI-PLDDGSSL 214
Query: 336 YDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWG 395
YDTPG+ HH+ A + + +L + P+ ++ + + + G T+F G
Sbjct: 215 YDTPGIINHHQMAHHIDSSELKYIMPKKEIKPKVYQQNA--------------GQTLFIG 260
Query: 396 GLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKG 455
L R D ++ + T + L ++ ++AD+ Y++ G L PP K
Sbjct: 261 ALARFDFIQG-ERSAFTVHVANDLPIHRTKLERADQLYEEHKGELLAPPTSKH------- 312
Query: 456 LDRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPK 515
+D+ L + P +DV ISGLGW++V+ + +A H PK
Sbjct: 313 IDQLPPLVRHEFSIKEPKTDVVISGLGWVTVQ----------------HANVVVAAHAPK 356
Query: 516 PVEVFVR 522
VEVF+R
Sbjct: 357 GVEVFIR 363
>gi|423521806|ref|ZP_17498279.1| ribosome biogenesis GTPase YqeH [Bacillus cereus HuA4-10]
gi|401176468|gb|EJQ83663.1| ribosome biogenesis GTPase YqeH [Bacillus cereus HuA4-10]
Length = 368
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 126/431 (29%), Positives = 194/431 (45%), Gaps = 66/431 (15%)
Query: 96 SAVASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGG 155
+ + C GCG +QT + GY + E ++ V+C RC L H + I V
Sbjct: 2 TEIIKCIGCGVEIQTENKNEIGYAPASSLEKEQ-------VICQRCFRLKHYNEIQDVS- 53
Query: 156 NGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVV 215
++ D+ L+ + + AL+VK+VDI DFNGS+L + G N ++LV
Sbjct: 54 ----------LTDDDFLRILNGIGQSDALVVKIVDIFDFNGSWLPGLHRFVGNNKVLLVG 103
Query: 216 TKVDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDV 275
K DL+PK + V W+ + + L V L S+ GI +A I+ ++G+DV
Sbjct: 104 NKADLIPKSVKHDKVKHWMRYSAKQLGLKPEDVFLISAAKGQGIAELADAIEHYREGKDV 163
Query: 276 YILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKL 335
Y++G NVGKS FIN ++K+ + + PGTTL I I L
Sbjct: 164 YVVGCTNVGKSTFINRMIKEFSDETENVITTSHF-------PGTTLDLIDI-PLDETSSL 215
Query: 336 YDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWG 395
YDTPG+ HH+ A V + L + P + ++ F + E T+F+G
Sbjct: 216 YDTPGIINHHQMAHYVGKQSLKLITPTTEVKPMVFQLNEEQ--------------TLFFG 261
Query: 396 GLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKG 455
GL R D + T + L ++ +KADE Y++ G L PP ++ E G
Sbjct: 262 GLARFDYVSG-GRRAFTCHFSNRLTIHRTKLEKADELYERHAGELLNPPT-PEELENMPG 319
Query: 456 LDRERLLEIKFE-DTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVP 514
+K+E + P +DV SGLGW++V + SG + HVP
Sbjct: 320 F-------VKYEFNIREPKTDVVFSGLGWVTV---------------NESGA-KIVAHVP 356
Query: 515 KPVEVFVRNPM 525
K V V +R +
Sbjct: 357 KGVSVSLRKSL 367
>gi|310643106|ref|YP_003947864.1| ribosome biogenesis GTPase yqeh [Paenibacillus polymyxa SC2]
gi|309248056|gb|ADO57623.1| Ribosome biogenesis GTPase YqeH [Paenibacillus polymyxa SC2]
gi|392303906|emb|CCI70269.1| GTP-binding protein engA [Paenibacillus polymyxa M1]
Length = 375
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 126/422 (29%), Positives = 202/422 (47%), Gaps = 63/422 (14%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG +QT+ D PGY+ +K + V+C RC + + + ++V
Sbjct: 13 CSGCGIVMQTTGPDLPGYI-------PEKLLTREPVICQRCFRIKNYNETSSVT------ 59
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
V DE + LS + + AL++ +VDI DF GS ++ ++ G+NP++L V K DL
Sbjct: 60 -----VDQDEFLKLLSQIGDKDALVIHIVDIFDFEGSLISGLQRFVGSNPVVLAVNKTDL 114
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK T++N V +WV + ++ L + L S+K G + + + + RDVY++G+
Sbjct: 115 LPKVTNWNKVRNWVQKQAKEQGLRTEEIVLCSAKKNQGFDRLLDVVSELRGNRDVYVVGA 174
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS IN L++ + M Q+ S PGTTL + I G + DTPG
Sbjct: 175 TNVGKSTLINRLIRDYSD------MEQEL--TTSRYPGTTLDMVNI-PLDDGKHIIDTPG 225
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ R + +V +DL A+ P L+ ++ + + G T+F+GG+ R
Sbjct: 226 IVYPWRFSEIVSRQDLSAIMPDKPLKPAAYQLDA--------------GQTLFFGGMARF 271
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D + ++ T Y L+++ ++AD+ + G L+PP Q AE + E
Sbjct: 272 DFVDGQHQS-FTCYINGGLKIHRTKLERADQLFADHAGELLSPPTRDQLAEMPEWTRHE- 329
Query: 461 LLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVEVF 520
F + SD+ ISGLGWI V S +G L +AVH P+ V V
Sbjct: 330 -----FRVPRKSPSDIYISGLGWIRV--------------NSENGAL-VAVHAPRGVRVL 369
Query: 521 VR 522
+R
Sbjct: 370 LR 371
>gi|209870498|pdb|3EC1|A Chain A, Structure Of Yqeh Gtpase From Geobacillus
Stearothermophilus (An Atnos1 ATNOA1 ORTHOLOG)
gi|209870499|pdb|3EC1|B Chain B, Structure Of Yqeh Gtpase From Geobacillus
Stearothermophilus (An Atnos1 ATNOA1 ORTHOLOG)
Length = 369
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 132/425 (31%), Positives = 190/425 (44%), Gaps = 63/425 (14%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +Q GY E + V+C RC L H + + V
Sbjct: 7 CIGCGAAIQFENPKNAGYAPKSVLE-----KDAEEVICQRCFRLKHYNEVQDVP------ 55
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
+ D+ L + KAL+V +VDI DFNGSF+ + A NPI+LV K DL
Sbjct: 56 -----LDDDDFLSMLHRIGESKALVVNIVDIFDFNGSFIPGLPRFAADNPILLVGNKADL 110
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LP+ + + W+ + L + V L S+ G+ V I + ++G DVY++G
Sbjct: 111 LPRSVKYPKLLRWMRRMAEELGLCPVDVCLVSAAKGIGMAKVMEAINRYREGGDVYVVGC 170
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS FIN ++++ A + S PGTTL I+I G LYDTPG
Sbjct: 171 TNVGKSTFINRIIEE--------ATGKGNVITTSYFPGTTLDMIEI-PLESGATLYDTPG 221
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ HH+ A V A DL + P+ + + + + NE G T+F+GGL R+
Sbjct: 222 IINHHQMAHFVDARDLKIITPKREIHPRVYQL-------NE-------GQTLFFGGLARL 267
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D +K Y L V+ +KAD Y +LG L+PP + AE + R
Sbjct: 268 DYIKG-GRRSFVCYMANELTVHRTKLEKADSLYANQLGELLSPPSKRYAAEFPPLVPRS- 325
Query: 461 LLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVEVF 520
L +K ER +D+ SGLGW++ L VH PK V+VF
Sbjct: 326 -LSVK----ER-KTDIVFSGLGWVT----------------CNDPGAQLVVHAPKGVDVF 363
Query: 521 VRNPM 525
+R +
Sbjct: 364 IRQSL 368
>gi|358464171|ref|ZP_09174137.1| ribosome biogenesis GTPase YqeH [Streptococcus sp. oral taxon 058
str. F0407]
gi|357067199|gb|EHI77325.1| ribosome biogenesis GTPase YqeH [Streptococcus sp. oral taxon 058
str. F0407]
Length = 368
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 129/426 (30%), Positives = 205/426 (48%), Gaps = 65/426 (15%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT++ G+ E K + V C RC L H + IT V
Sbjct: 6 CIGCGATIQTTDKAGLGFTPQSALE---KGLETGEVYCQRCFRLRHYNEITDVQ------ 56
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ + L + AL+V ++DI DFNGS + + N ++LV K D+
Sbjct: 57 -----LTDDDFLKLLHEVGDSDALVVNVIDIFDFNGSVIPGLSRFVSGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W+VE ++ L + V LTS+++ I V +I+ +KGRDVY++G
Sbjct: 112 LPKSVKPGKISQWLVERAHEEGLRPVDVVLTSAQNKHAIKEVIDKIEHYRKGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G+++ S PGTTL I+I G +YDTP
Sbjct: 172 TNVGKSTLINAIIQEITGDQNVITT---------SRFPGTTLDKIEI-PLDDGAYIYDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + A++L ++P+ ++ +++ + SE T+F GGL R
Sbjct: 222 GIIHRHQMAHYLTAKNLKYVSPKKEIKPKTYQLNSEQ--------------TLFLGGLGR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + F+ L+++ + A FY K LG+ LTPP K+K D
Sbjct: 268 FDFISGEKQGFTAFF-DNELKLHRTKLEGASAFYDKHLGILLTPPNSKEKE------DFP 320
Query: 460 RLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVEV 519
+L++ F T + +D+ ISGLGWI V +G +AV VP+ V V
Sbjct: 321 KLVQHVF--TIKDKTDLVISGLGWIRV-----------------TGTAKVAVWVPEGVAV 361
Query: 520 FVRNPM 525
R +
Sbjct: 362 VTRKAI 367
>gi|335031074|ref|ZP_08524532.1| ribosome biogenesis GTPase YqeH [Streptococcus anginosus SK52 = DSM
20563]
gi|333770542|gb|EGL47570.1| ribosome biogenesis GTPase YqeH [Streptococcus anginosus SK52 = DSM
20563]
Length = 368
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 131/426 (30%), Positives = 203/426 (47%), Gaps = 65/426 (15%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGAP+QT D GY+ E K + + C RC L H + IT V
Sbjct: 6 CIGCGAPIQTKYKDRLGYIPQSALE---KGLETGELYCQRCFRLRHYNEITDV------- 55
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
Q D LR L + AL+V +VDI DFNGS + + N ++LV K D+
Sbjct: 56 ---QLTDDDFLR-LLHEVGDSNALVVNVVDIFDFNGSVIPGLPRFVAGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + V W++E ++ L + V LTS+++ I + +I++ +KGRDVY++G
Sbjct: 112 LPKSVKTSKVTQWLMERAHEEGLRPVDVVLTSAQNKQAIKELIEKIEQYRKGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G+++ S PGTTL I+I G +YDTP
Sbjct: 172 TNVGKSTLINAIIQEITGDKEVITT---------SRFPGTTLDKIEI-PLADGSHIYDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + A++L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLSAKNLKYISPKKEIKPKTYQLNPEQ--------------TLFLGGLGR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + T Y L+++ A EFY+K +G LTPP K+ ++ + + E
Sbjct: 268 FDFVSG-DKQGFTAYFDNELKLHRTKLAGAGEFYEKHVGSLLTPPSKKEVSDFPQLVKHE 326
Query: 460 RLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVEV 519
+E K +DV SGLGWI V +G +AV P+ V V
Sbjct: 327 LKIEAK--------TDVVFSGLGWIRV-----------------TGPAQIAVWAPEGVAV 361
Query: 520 FVRNPM 525
R +
Sbjct: 362 VTRKAI 367
>gi|239827797|ref|YP_002950421.1| GTP-binding protein YqeH [Geobacillus sp. WCH70]
gi|239808090|gb|ACS25155.1| Nitric-oxide synthase [Geobacillus sp. WCH70]
Length = 370
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 121/389 (31%), Positives = 193/389 (49%), Gaps = 48/389 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +Q+ + PGY E +K+ V+C RC L H + + V
Sbjct: 8 CIGCGALIQSEDETKPGYAPKSVLEKEKEE-----VICQRCFRLKHYNEVQDVA------ 56
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ + L + + +AL+VK+VDI DFNGS+L + NPI+LV KVDL
Sbjct: 57 -----LTDDDFLKILHRIGQSEALVVKIVDIFDFNGSWLPGLHRFVANNPIMLVGNKVDL 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + + W+ ++ + L + + L S+ G+ V I+K + G+DVY++G
Sbjct: 112 LPKSVKYPKLIHWMKQSASDLGLKPIDICLVSAVKGIGMAKVMEAIEKYRFGKDVYVVGC 171
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS FIN ++++ A + S PGTTL I+I G +YDTPG
Sbjct: 172 TNVGKSTFINRIIQE--------ATGKGNVITTSYFPGTTLDMIEI-PLDDGAAIYDTPG 222
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ HH+ A V +DL + P+ + + + + NE + T+F+GGL R+
Sbjct: 223 IINHHQMAHFVDKKDLKIITPKREIHPKVYQL-------NEQQ-------TLFFGGLARL 268
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D +K + + ++ L ++ +KAD Y +LG L+PP K + + L+
Sbjct: 269 DYIKGGRRSFVCYFS-NELLIHRTKLEKADALYANQLGELLSPP-RKHYIDQFPPLEAH- 325
Query: 461 LLEIKFEDTERPASDVAISGLGWISV-EP 488
F ER +D+ SGLGW++ EP
Sbjct: 326 ----TFTIKER-KTDIVFSGLGWVTCNEP 349
>gi|410456867|ref|ZP_11310718.1| GTPase YqeH [Bacillus bataviensis LMG 21833]
gi|409927249|gb|EKN64392.1| GTPase YqeH [Bacillus bataviensis LMG 21833]
Length = 368
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 129/427 (30%), Positives = 196/427 (45%), Gaps = 69/427 (16%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG +QT + GY E + T++C RC L H + + V
Sbjct: 8 CMGCGVKVQTENPEDLGYAPASALEKE-------TIICQRCFRLKHYNEVQDVN------ 54
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ + L+ + R ALIV +VDI DFNGS+L + G N ++LV KVDL
Sbjct: 55 -----LTDDDFLKILNEMGRTDALIVMIVDIFDFNGSWLPGLHRFVGHNKVLLVGNKVDL 109
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK N + W+ + L V L S+ + A+ I + + G+DVY++G
Sbjct: 110 LPKSVKHNKLIHWMKHEAKELGLRPEEVFLVSAAKGVNVKETAAAIDELRNGKDVYVVGC 169
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS FIN ++K++ GE D S PGTTL I+I L D+P
Sbjct: 170 TNVGKSTFINRIIKEVTGEADVITT---------SHFPGTTLDIIKI-PLDDEKSLIDSP 219
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ HH+ A V +DL + P+ ++ F + NE G T+F+GGL R
Sbjct: 220 GIINHHQMAHFVDKKDLKIITPKKEIKPMVFQL-------NE-------GQTLFFGGLAR 265
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + Y L ++ T+ A E Y+K +G LTPP G ++ E + L ++
Sbjct: 266 FDYISG-GRRSFVCYVSNELNIHRTKTENASELYEKHVGEMLTPP-GSEQVETFPELVKQ 323
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV-EPVRRSIRNSDINLESTSGELHLAVHVPKPVE 518
+ + +D+ SGLGWI+V EP + +A +VPK V+
Sbjct: 324 EFI------IKEAKTDIVFSGLGWITVNEPGAK-----------------VAAYVPKGVQ 360
Query: 519 VFVRNPM 525
+R +
Sbjct: 361 TLIRKSL 367
>gi|308069994|ref|YP_003871599.1| hypothetical protein PPE_03243 [Paenibacillus polymyxa E681]
gi|305859273|gb|ADM71061.1| Conserved hypothetical protein [Paenibacillus polymyxa E681]
Length = 375
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 126/422 (29%), Positives = 203/422 (48%), Gaps = 63/422 (14%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG +QT+ + PGY+ +K + V+C RC + + + ++V
Sbjct: 13 CSGCGITVQTTSPELPGYI-------PEKLLTREPVICQRCFRIKNYNETSSVT------ 59
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
V DE + LS + + AL++ +VDI DF GS ++ ++ G+NP+IL V K DL
Sbjct: 60 -----VDQDEFLKLLSQIGDKDALVIHIVDIFDFEGSLISGLQRFVGSNPVILAVNKTDL 114
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK T++N V +WV + ++ L + L S+K G + + + + RDVY++G+
Sbjct: 115 LPKVTNWNKVRNWVQKQAKEQGLRTEEIVLCSAKKNQGFDRLLDVVSELRGNRDVYVVGA 174
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS IN L++ + M Q+ S PGTTL + I G + DTPG
Sbjct: 175 TNVGKSTLINRLIRDYSD------MEQEL--TTSRYPGTTLDMVNI-PLDDGKHIIDTPG 225
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ R + +V +DL A+ P L+ ++ + + G T+F+GG+ R
Sbjct: 226 IVYPWRFSEIVSRQDLSAIMPDKPLKPAAYQLDA--------------GQTLFFGGMSRF 271
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D ++ ++ T Y L+++ ++AD+ + G L+PP Q AE + E
Sbjct: 272 DFVEGQHQS-FTCYINGGLKIHRTKLERADQLFADHAGELLSPPTRDQLAEMPEWTRHE- 329
Query: 461 LLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVEVF 520
F + SD+ ISGLGWI V S +G L +AVH P+ V V
Sbjct: 330 -----FRVPRKSPSDIYISGLGWIRV--------------NSENGAL-VAVHAPRGVRVL 369
Query: 521 VR 522
+R
Sbjct: 370 LR 371
>gi|229552536|ref|ZP_04441261.1| GTP-binding protein [Lactobacillus rhamnosus LMS2-1]
gi|258539909|ref|YP_003174408.1| GTP-binding protein YqeH [Lactobacillus rhamnosus Lc 705]
gi|385835558|ref|YP_005873332.1| ribosome biogenesis GTPase YqeH [Lactobacillus rhamnosus ATCC 8530]
gi|229314088|gb|EEN80061.1| GTP-binding protein [Lactobacillus rhamnosus LMS2-1]
gi|257151585|emb|CAR90557.1| GTP-binding protein [Lactobacillus rhamnosus Lc 705]
gi|355395049|gb|AER64479.1| ribosome biogenesis GTPase YqeH [Lactobacillus rhamnosus ATCC 8530]
Length = 374
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 125/387 (32%), Positives = 187/387 (48%), Gaps = 48/387 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA LQT++ PGY+ T K + C RC L H + I V
Sbjct: 12 CIGCGAILQTTDPKKPGYLPAATL---AKAEADDDIYCQRCFRLRHYNEIAPVT------ 62
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ L+ + ALIV ++DI DFNGS + + G NP+ILV K D+
Sbjct: 63 -----LTDDDFLRLLNAIGESNALIVNVIDIFDFNGSVIPGLHRFVGDNPVILVGNKADV 117
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + N + +W+ + + L ++ L S+K G+ + + I+K ++ RDVY++G
Sbjct: 118 LPKSLNPNKLKNWLQQQAKAQGLRPVTTLLASAKKGFGVDELLTAIEKYREHRDVYVVGV 177
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
N GKS IN ++K++ G D S PGTTL I I G L DTP
Sbjct: 178 TNTGKSTLINRIIKQLTGVEDLITT---------SRFPGTTLDRIMI-PLDDGQSLIDTP 227
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A V ++DL ++P S ++ ++ + NE G TIF GGL R
Sbjct: 228 GIIHRHQMAHFVGSKDLKLVSPTSVIKPATYQL-------NE-------GQTIFLGGLAR 273
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D L+ ++ Y L ++ ADEFYQK +G L PP + R+
Sbjct: 274 FDYLRGGRQS-FVIYADTQLPLHRTKLINADEFYQKHVGGLLAPPQADEV--------RD 324
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
++FE T + SD+ +GLGWI+V
Sbjct: 325 FPPLVRFEFTPKEKSDLVFAGLGWITV 351
>gi|300813180|ref|ZP_07093554.1| ribosome biogenesis GTPase YqeH [Lactobacillus delbrueckii subsp.
bulgaricus PB2003/044-T3-4]
gi|300495838|gb|EFK30986.1| ribosome biogenesis GTPase YqeH [Lactobacillus delbrueckii subsp.
bulgaricus PB2003/044-T3-4]
Length = 369
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 121/386 (31%), Positives = 187/386 (48%), Gaps = 46/386 (11%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA LQ+ + PGY+ P + K ++ + + V C RC L H + I V
Sbjct: 7 CIGCGAALQSQDKQLPGYL-PASALAKVENGEREEVYCQRCFRLRHYNEIMPVS------ 59
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
+ D+ L+ + +KALIV +VD+ DF+ S ++ ++ G N ILV K+DL
Sbjct: 60 -----LDNDDFLALLNTMAEKKALIVNVVDLFDFSNSLISSLKRFVGTNDFILVGNKLDL 114
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
PK + + + DW+ + + L + L S+ + + + K + +DVY +G+
Sbjct: 115 FPKNSKESKIKDWMRQEANRMGLYPKDIFLISAAKKKNLDTLIDYLNKHSQDQDVYFVGT 174
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS INA++ +MG+ S PGTTL I+I G L DTPG
Sbjct: 175 TNVGKSTLINAIIDEMGDVQDLIT--------TSRFPGTTLDQIEI-PLDNGHFLVDTPG 225
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ + A+ + +DL +P+ L+ ++ + L G TIF GL RI
Sbjct: 226 ILTDKQLASRLDPKDLDLASPKKPLKPATYQL--------------LPGNTIFLAGLGRI 271
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D LK P T T Y + + ++ T+KADEFYQK +G L+PP KG +
Sbjct: 272 DYLKG-PSTSFTIYAARGMYIHRTKTEKADEFYQKHVGELLSPPGPNSDLPPLKGQE--- 327
Query: 461 LLEIKFEDTERPASDVAISGLGWISV 486
IK+ SDV +G+G+I+V
Sbjct: 328 -YSIKYR------SDVLFAGVGFITV 346
>gi|452822685|gb|EME29702.1| GTP-binding protein [Galdieria sulphuraria]
Length = 547
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 141/496 (28%), Positives = 227/496 (45%), Gaps = 78/496 (15%)
Query: 64 FLELQ------KAKEAAKVVVRDSKKKRKKKDKVLKVNSAVASCYGCGAPLQTSESDAPG 117
FL+L+ KA E K +VR+ K + + C GCGA LQT + G
Sbjct: 70 FLDLEEFELTRKASEERKALVREFYKYP------VFIQELSGKCVGCGAKLQTDNPNTIG 123
Query: 118 YVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMIT---AVGGNGGYAGGKQFVSADELREK 174
YV P ++L + H +C RC + H ++ +G S ++
Sbjct: 124 YVPP--FKLTENHR----FVCQRCYYMVHRTLVEDQLKIGATEDSTNKDILHSLKLFEQR 177
Query: 175 LSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDLLPKGTDFNCVGDWV 234
L ++ ++ +IV +VDI DF+GSF++R+ + G NP+IL+V K+DLLPK + + W+
Sbjct: 178 LENICSKRCIIVYMVDIFDFDGSFVSRLPFITGNNPVILIVNKIDLLPKDINIGRLYVWL 237
Query: 235 VEATTKKKLN-VLSVHLTSSKSLAGIVGVASEIQK--EKKGRDVYILGSANVGKSAFINA 291
+ L + +H S + ++I + + DVY++G NVGKS FIN
Sbjct: 238 KNQCEARGLTKIHRIHFVSCTKDYRMGETKADIIRLVQYLNADVYVVGCTNVGKSTFINR 297
Query: 292 LL-----KKMGER---------------DPAAAMAQKYRP--IQSAVPGTTLGPIQIDAF 329
LL KK G+ + A K P S PGTTL PI+I F
Sbjct: 298 LLSNTVEKKTGQELLNYLGLKQGQFSLTELKRAFKDKKDPQLTTSCFPGTTLNPIRIH-F 356
Query: 330 LGGGKLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNG 389
+YDTPG+ H+ ++ +E++ + P+ R+R SF + + G
Sbjct: 357 GRSHSMYDTPGIIQPHQITHLLTSEEIKMVLPKKRVRVVSFRL--------------MEG 402
Query: 390 FTIFWGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQK 449
I +GGL R+++L+ P T + ++V+ T KA+E + +G L PPI +K
Sbjct: 403 KCIHFGGLARLEMLQGKP-FFFTVFMSNEVKVHPSTTAKAEELLETHVGGLLQPPISWRK 461
Query: 450 AEGWKGLDRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHL 509
+ G + + E+ + + D+ ISGLGW++V + G L +
Sbjct: 462 YKEL-GNFKAKEFEVDGVGWLQSSHDIVISGLGWVAV---------------TGCGRLKV 505
Query: 510 AVHVPKPVEVFVRNPM 525
V PK V VF+R P+
Sbjct: 506 RVVAPKGVGVFLREPI 521
>gi|408411085|ref|ZP_11182268.1| Ribosome biogenesis GTPase YqeH [Lactobacillus sp. 66c]
gi|409349111|ref|ZP_11232656.1| Ribosome biogenesis GTPase YqeH [Lactobacillus equicursoris CIP
110162]
gi|407874748|emb|CCK84074.1| Ribosome biogenesis GTPase YqeH [Lactobacillus sp. 66c]
gi|407878383|emb|CCK84714.1| Ribosome biogenesis GTPase YqeH [Lactobacillus equicursoris CIP
110162]
Length = 369
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 123/386 (31%), Positives = 185/386 (47%), Gaps = 46/386 (11%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA LQ+ + PGY+ P + K + + V C RC L H + I V
Sbjct: 7 CIGCGASLQSEDKSLPGYL-PQSALQKVLDGENEEVYCQRCFRLRHYNEIMPVA------ 59
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
+ D+ L+ L +KALIV +VD+ DF+ S +A ++ G N ILV K DL
Sbjct: 60 -----LDNDDFLALLNSLSSKKALIVNVVDLFDFSNSLIASLKRFVGQNDFILVGNKFDL 114
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
PK + + + DW+ + + L + L S+ + + + + +DVY +G+
Sbjct: 115 FPKNSKESKIKDWMRQEANRMGLYPKEIFLISAAKKKNLDDLIKYLNANSQDQDVYFVGT 174
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS INA++ KMG+ S PGTTL I+I G L DTPG
Sbjct: 175 TNVGKSTLINAIIDKMGDVQDLIT--------TSRFPGTTLDKIEI-PLDNGHFLVDTPG 225
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ + A+ + ++L ++P+ L+ ++ + L G TIF GL RI
Sbjct: 226 ILTKKQLASRLSVKELDLVSPKKPLKPATYQL--------------LPGNTIFLAGLGRI 271
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D L+ P T T Y +S+ V+ T+KADEFY K +G LTPP + KG +
Sbjct: 272 DYLQG-PSTSFTVYASRSMYVHRTKTEKADEFYAKHVGELLTPPSAEDDLPPLKGQE--- 327
Query: 461 LLEIKFEDTERPASDVAISGLGWISV 486
IK+ SDV +G+G+I+V
Sbjct: 328 -YHIKYR------SDVLFAGVGFITV 346
>gi|339639756|ref|ZP_08661200.1| ribosome biogenesis GTPase YqeH [Streptococcus sp. oral taxon 056
str. F0418]
gi|339453025|gb|EGP65640.1| ribosome biogenesis GTPase YqeH [Streptococcus sp. oral taxon 056
str. F0418]
Length = 368
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 123/387 (31%), Positives = 191/387 (49%), Gaps = 48/387 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGAP+QT + G+ E K + + C RC L H + I+ V
Sbjct: 6 CIGCGAPIQTEDKGKLGFTPQSALE---KGLETGELYCQRCFRLRHYNEISDV------- 55
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
Q D LR L + AL+V ++DI DFNGS + + N ++LV K D+
Sbjct: 56 ---QLTDDDFLR-LLHEVGDSDALVVNVIDIFDFNGSVIPGLPRFVAGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + V W+ E ++ L + V LTS+++ I + +I+ +KGRDVY++G
Sbjct: 112 LPKSVKDSKVTQWLTERAHEEGLRPVDVVLTSAQNKQAIKDLIDKIEHCRKGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G++D S PGTTL I+I G +YDTP
Sbjct: 172 TNVGKSTLINAIIQEITGDKDIITT---------SRFPGTTLDKIEI-PLADGSHIYDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + A++L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLSAKNLKYVSPKKEIKPKTYQLHPEQ--------------TLFLGGLGR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + V + T Y L+++ A +FY K +G L PP+GK+K E + L
Sbjct: 268 FDFV-VGDKQGFTAYFDNELKLHRTKLQGASDFYDKHVGSLLVPPVGKEKEE-FPAL--- 322
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
+K E T + +D+ SGLGWI V
Sbjct: 323 ----VKHEFTLKDKTDIVFSGLGWIRV 345
>gi|385816103|ref|YP_005852494.1| GTP-binding protein [Lactobacillus delbrueckii subsp. bulgaricus
2038]
gi|418028692|ref|ZP_12667246.1| hypothetical protein LDBUL1632_00040 [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1632]
gi|325126140|gb|ADY85470.1| GTP-binding protein [Lactobacillus delbrueckii subsp. bulgaricus
2038]
gi|354691530|gb|EHE91451.1| hypothetical protein LDBUL1632_00040 [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1632]
Length = 378
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 121/386 (31%), Positives = 187/386 (48%), Gaps = 46/386 (11%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA LQ+ + PGY+ P + K ++ + + V C RC L H + I V
Sbjct: 16 CIGCGAALQSQDKQLPGYL-PASALAKVENGEREEVYCQRCFRLRHYNEIMPVS------ 68
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
+ D+ L+ + +KALIV +VD+ DF+ S ++ ++ G N ILV K+DL
Sbjct: 69 -----LDNDDFLALLNTMAEKKALIVNVVDLFDFSNSLISSLKRFVGTNDFILVGNKLDL 123
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
PK + + + DW+ + + L + L S+ + + + K + +DVY +G+
Sbjct: 124 FPKNSKESKIKDWMRQEANRMGLYPKDIFLISAAKKKKLDTLIDYLNKHSQDQDVYFVGT 183
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS INA++ +MG+ S PGTTL I+I G L DTPG
Sbjct: 184 TNVGKSTLINAIIDEMGDVQDLIT--------TSRFPGTTLDQIEI-PLDNGHFLVDTPG 234
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ + A+ + +DL +P+ L+ ++ + L G TIF GL RI
Sbjct: 235 ILTDKQLASRLDPKDLDLASPKKPLKPATYQL--------------LPGNTIFLAGLGRI 280
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D LK P T T Y + + ++ T+KADEFYQK +G L+PP KG +
Sbjct: 281 DYLKG-PSTSFTIYAARGMYIHRTKTEKADEFYQKHVGELLSPPGPNSDLPPLKGQE--- 336
Query: 461 LLEIKFEDTERPASDVAISGLGWISV 486
IK+ SDV +G+G+I+V
Sbjct: 337 -YSIKYR------SDVLFAGVGFITV 355
>gi|456011614|gb|EMF45351.1| GTP-binding protein YqeH, required for biogenesis of 30S ribosome
subunit [Planococcus halocryophilus Or1]
Length = 367
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 128/427 (29%), Positives = 194/427 (45%), Gaps = 65/427 (15%)
Query: 96 SAVASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGG 155
S + +C GCG +QT + GY P + E + ++C RC L + + + V
Sbjct: 2 SEMPTCIGCGVQIQTENKEEVGYAPPSSLEKDE-------IICQRCFRLKNYNELQPVS- 53
Query: 156 NGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVV 215
++ D+ L+ L LIVK+VDI DFNGS+L + G N I+L+
Sbjct: 54 ----------LTDDDFLRILNGLGERDGLIVKIVDIFDFNGSWLPGLHRFVGNNDILLIA 103
Query: 216 TKVDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDV 275
K DLLPK + + W+ + K L + V S+ G+ I+K +KG+DV
Sbjct: 104 NKADLLPKSVKQHKLIHWMKQEARKLGLQPIDVLTVSAHRGTGVPEAMEAIEKYRKGKDV 163
Query: 276 YILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKL 335
Y++G NVGKS FIN ++K+ A Q S PGTTL I+I L
Sbjct: 164 YVVGCTNVGKSTFINRVIKQ--------ATGQSDVITTSHFPGTTLDMIEI-PLDDERSL 214
Query: 336 YDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWG 395
+DTPG+ HH+ A + DL + P+ ++ + F + +E T+F G
Sbjct: 215 FDTPGIINHHQLAHHLKTADLKQIMPKKEIKPRVFQLNAEQ--------------TLFIG 260
Query: 396 GLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKG 455
GL R D +K + T + L ++ D AD Y + LG L PP + K + +
Sbjct: 261 GLARFDFIKG-ERSSFTVHIANDLPIHRTKLDNADALYAQHLGDMLAPPSAEYK-DDFPE 318
Query: 456 LDRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPK 515
L R E +D + +D+ SGLGWI+++ G +A H PK
Sbjct: 319 LVRH---EFSIKDAK---TDIVFSGLGWITIQ----------------HGNAVVAAHAPK 356
Query: 516 PVEVFVR 522
VEV +R
Sbjct: 357 GVEVLLR 363
>gi|421894614|ref|ZP_16325101.1| ribosome biogenesis GTPase YqeH [Pediococcus pentosaceus IE-3]
gi|385272529|emb|CCG90473.1| ribosome biogenesis GTPase YqeH [Pediococcus pentosaceus IE-3]
Length = 370
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 124/387 (32%), Positives = 189/387 (48%), Gaps = 49/387 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA LQ ++ APGY P++ KK + + C RC L H + I V
Sbjct: 9 CIGCGAILQVTDKKAPGYT-PES--ALKKGLESGQLYCQRCFRLRHYNEIAPVD------ 59
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
+S D+ R+ LS + +L+V +VD+ DFNGS + + G NP++LV K D+
Sbjct: 60 -----ISDDDFRKLLSQISDSNSLVVYVVDMFDFNGSLIPGLHRFIGDNPVLLVGNKEDV 114
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
PK + + +W+ + + V +TS+K+ + + + + ++K +KGRDVY++G
Sbjct: 115 FPKSIKRHRMKEWLRQQAKANGILPEDVVITSAKNASSVEALFNAVEKLRKGRDVYVVGV 174
Query: 281 ANVGKSAFINALLK-KMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS IN+L+ + G +D S PGTTL I+I F L DTP
Sbjct: 175 TNVGKSTLINSLIAIRNGIKDVITT---------SRFPGTTLDRIEI-PFDDHSNLIDTP 224
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ + A V+ AEDL ++PQ ++ + F + S+ T+F G L R
Sbjct: 225 GIIHADQMAHVLAAEDLKYVSPQKTIKPRVFQLNSQQ--------------TLFLGALAR 270
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D E +T Y +L V+ + AD FY+K G LTPP A+
Sbjct: 271 FDYEH--SEGSVTAYFDNNLMVHRTKLENADNFYEKHAGELLTPPTADNLAK------MP 322
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
+L+ +F + SD+ GLGWISV
Sbjct: 323 KLVAHQFSADQD--SDIVFEGLGWISV 347
>gi|297529309|ref|YP_003670584.1| ribosome biogenesis GTPase YqeH [Geobacillus sp. C56-T3]
gi|297252561|gb|ADI26007.1| ribosome biogenesis GTPase YqeH [Geobacillus sp. C56-T3]
Length = 369
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 131/425 (30%), Positives = 196/425 (46%), Gaps = 63/425 (14%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +Q + GY E ++ ++C RC L H + + V
Sbjct: 7 CIGCGAAIQFDDPKKAGYAPKSVLEKDEEE-----IICQRCFRLKHYNEVQDVP------ 55
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
+ + L + KAL+V +VDI DFNGS++ + A NPI+LV K DL
Sbjct: 56 -----LDDSDFLNMLHRIGESKALVVNIVDIFDFNGSWIPGLPRFAAENPILLVGNKADL 110
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LP+ + + W+ + L + V L S+ G+ V I + ++G DVY++G
Sbjct: 111 LPRSVKYPKLLRWMRRMAEELGLCPVDVCLVSAAKGIGMAKVMEAINRYREGGDVYVVGC 170
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS FIN ++++ A + S PGTTL I+I GG LYDTPG
Sbjct: 171 TNVGKSTFINRIIEE--------ATGKGNVITTSYFPGTTLDMIEI-PLEGGATLYDTPG 221
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ HH+ A V A DL + P+ + + + + NE G T+F+GGL R+
Sbjct: 222 IINHHQMAHFVDARDLKIITPKREIHPRVYQL-------NE-------GQTLFFGGLARL 267
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D +K Y L V+ +KAD Y +LG L+PP + AE + R
Sbjct: 268 DYIKG-GRRSFVCYMANELTVHRTKLEKADSLYANQLGDLLSPPNKRYAAEFPPLVPRS- 325
Query: 461 LLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVEVF 520
L +K ER +D+ SGLGW++ +D+ + L VH PK V+VF
Sbjct: 326 -LSVK----ER-KTDIVFSGLGWVTC---------NDLGAQ-------LVVHAPKGVDVF 363
Query: 521 VRNPM 525
+R +
Sbjct: 364 IRQSL 368
>gi|340399488|ref|YP_004728513.1| nitric-oxide synthase (GTPase) [Streptococcus salivarius CCHSS3]
gi|338743481|emb|CCB93991.1| nitric-oxide synthase (GTPase) [Streptococcus salivarius CCHSS3]
Length = 372
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 121/388 (31%), Positives = 191/388 (49%), Gaps = 48/388 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT + + GY + KK + + C RC L H + I V
Sbjct: 6 CIGCGAQIQTEDKEKAGYTPASSI---KKAEETGELYCQRCFRLRHYNEIVDV------- 55
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ DE + L + AL+V +VDI DFNGS + + N ++LV K D+
Sbjct: 56 ----HITDDEFLKLLHEVGDSDALVVNVVDIFDFNGSIIPGLSRFVSGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK V W+ E ++ + + V LTS+++ I + I+K +KGRDVY++G
Sbjct: 112 LPKSVKDGKVTQWLTERAHEEGMRPVDVMLTSAQNHHAIKELIQRIEKLRKGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA++K++ G++D S PGTTL I+I G ++DTP
Sbjct: 172 TNVGKSTLINAIIKEITGDKDIITT---------SRFPGTTLDKIEI-PLDDGTYIFDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + A+DL ++P+ ++ +++ + + G T+F GGL R
Sbjct: 222 GIIHRHQMAHYLSAKDLKYVSPKKEIKPKTYQLNA--------------GQTLFLGGLGR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + F+ +L+++ + AD FY K +G L PP K A D
Sbjct: 268 FDFIDGNKQGFTAFF-DNNLKLHRTKLEGADAFYDKHVGSLLMPPGPKDLA------DFP 320
Query: 460 RLLEIKFEDTERPASDVAISGLGWISVE 487
+L I+ E T + +D+ SGLGWI V+
Sbjct: 321 KL--IRHEFTVKDKTDIVFSGLGWIRVQ 346
>gi|335357147|ref|ZP_08549017.1| GTPase YqeH [Lactobacillus animalis KCTC 3501]
Length = 371
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 122/388 (31%), Positives = 189/388 (48%), Gaps = 48/388 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +Q+ + PGY + K + + C RC L H + + V
Sbjct: 9 CIGCGAKIQSEDKAEPGYTPQAAIQ---KGLENSELYCQRCFRLRHYNEVADVS------ 59
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ L+ + + ALIV +VDI DFNGS + + G NP++LV K DL
Sbjct: 60 -----LTDDDFLRLLNQIGQTDALIVNVVDIFDFNGSLIPGLHRFVGDNPVLLVGNKEDL 114
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LP + + DW+ + K+ L + V LTS+K + + I K ++GRDVY++G
Sbjct: 115 LPHSLKRSKIKDWMRQEANKQGLRPVDVALTSAKRGKDLEDLLELIDKYREGRDVYVVGV 174
Query: 281 ANVGKSAFINALLKK-MGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS IN ++ + G +D S PGTTL I+I F G L DTP
Sbjct: 175 TNVGKSTLINRIINQTTGVKDLITT---------SRFPGTTLDRIEI-PFGDGHFLIDTP 224
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + + L APQ ++ + + + NE G T+F+G L R
Sbjct: 225 GIIHKHQMAHYLSPKALRLAAPQKEIKPKVYQL-------NE-------GQTLFFGALAR 270
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + + Y +L ++ T+KA EFY K G LTPP ++ D
Sbjct: 271 FDYISGGKQGVIV-YTDNNLMIHRTKTEKATEFYAKHAGTLLTPPTAEEMK------DFP 323
Query: 460 RLLEIKFEDTERPASDVAISGLGWISVE 487
+L+ +F+ TE+ SD+ +GLGW++V+
Sbjct: 324 KLVRFEFKTTEK--SDLVFAGLGWVTVK 349
>gi|56421060|ref|YP_148378.1| GTP-binding protein YqeH [Geobacillus kaustophilus HTA426]
gi|375009615|ref|YP_004983248.1| hypothetical protein [Geobacillus thermoleovorans CCB_US3_UF5]
gi|56380902|dbj|BAD76810.1| hypothetical conserved protein [Geobacillus kaustophilus HTA426]
gi|359288464|gb|AEV20148.1| hypothetical protein GTCCBUS3UF5_28450 [Geobacillus thermoleovorans
CCB_US3_UF5]
Length = 369
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 130/425 (30%), Positives = 192/425 (45%), Gaps = 63/425 (14%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +Q + GY E ++ ++C RC L H + + V
Sbjct: 7 CIGCGAAIQFDDPKKAGYAPKSVLEKDEEE-----IICQRCFRLKHYNEVQDVP------ 55
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
+ + L + KAL+V +VDI DFNGS++ + A NPI+LV K DL
Sbjct: 56 -----LDDSDFLNMLHRIGESKALVVNIVDIFDFNGSWIPGLPRFAAENPILLVGNKADL 110
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LP+ + + W+ + L + V L S+ G+ V I + ++G DVY++G
Sbjct: 111 LPRSVKYPKLLRWMRRMAEELGLRPVDVCLVSAAKGIGMAKVMEAINRYREGGDVYVVGC 170
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS FIN ++++ A + S PGTTL I+I GG LYDTPG
Sbjct: 171 TNVGKSTFINRIIEE--------ATGKGNVITTSYFPGTTLDMIEI-PLEGGATLYDTPG 221
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ HH+ A V A DL + P+ + + + + NE G T+F+GGL R+
Sbjct: 222 IINHHQMAHFVDARDLKIITPKREIHPRVYQL-------NE-------GQTLFFGGLARL 267
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D +K Y L V+ +KAD Y +LG L+PP + AE + R
Sbjct: 268 DYIKG-GRRSFVCYMANELTVHRTKLEKADSLYANQLGDLLSPPNKRYAAEFPPLVPRS- 325
Query: 461 LLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVEVF 520
L +K ER +D+ SGLGW++ L VH PK V+VF
Sbjct: 326 -LSVK----ER-KTDIVFSGLGWVT----------------CNDPGAQLVVHAPKGVDVF 363
Query: 521 VRNPM 525
+R +
Sbjct: 364 IRQSL 368
>gi|313124180|ref|YP_004034439.1| ribosome biogenesis GTPase yqeh [Lactobacillus delbrueckii subsp.
bulgaricus ND02]
gi|312280743|gb|ADQ61462.1| Ribosome biogenesis GTPase YqeH [Lactobacillus delbrueckii subsp.
bulgaricus ND02]
Length = 369
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 121/386 (31%), Positives = 186/386 (48%), Gaps = 46/386 (11%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA LQ+ + PGY+ P + K ++ + V C RC L H + I V
Sbjct: 7 CIGCGAALQSQDKQLPGYL-PASALAKVENGERDEVYCQRCFRLRHYNEIMPVS------ 59
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
+ D+ L+ + +KALIV +VD+ DF+ S ++ ++ G N ILV K+DL
Sbjct: 60 -----LDNDDFLALLNTMAEKKALIVNVVDLFDFSNSLISSLKRFVGTNDFILVGNKLDL 114
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
PK + + + DW+ + + L + L S+ + + + K + +DVY +G+
Sbjct: 115 FPKNSKESKIKDWMRQEANRMGLYPKDIFLISAAKKKNLDTLIDYLNKHSQDQDVYFVGT 174
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS INA++ +MG+ S PGTTL I+I G L DTPG
Sbjct: 175 TNVGKSTLINAIIDEMGDVQDLIT--------TSRFPGTTLDQIEI-PLDNGHFLVDTPG 225
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ + A+ + +DL +P+ L+ ++ + L G TIF GL RI
Sbjct: 226 ILTDKQLASRLDPKDLDLASPKKPLKPATYQL--------------LPGNTIFLAGLGRI 271
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D LK P T T Y + + ++ T+KADEFYQK +G L+PP KG +
Sbjct: 272 DYLKG-PSTSFTIYAARGMYIHRTKTEKADEFYQKHVGELLSPPGPNSDLPPLKGQE--- 327
Query: 461 LLEIKFEDTERPASDVAISGLGWISV 486
IK+ SDV +G+G+I+V
Sbjct: 328 -YSIKYR------SDVLFAGVGFITV 346
>gi|116492472|ref|YP_804207.1| GTP-binding protein YqeH [Pediococcus pentosaceus ATCC 25745]
gi|116102622|gb|ABJ67765.1| Predicted GTPase [Pediococcus pentosaceus ATCC 25745]
Length = 370
Score = 174 bits (442), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 124/387 (32%), Positives = 189/387 (48%), Gaps = 49/387 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA LQ ++ APGY P++ KK + + C RC L H + I V
Sbjct: 9 CIGCGAILQVTDKKAPGYT-PES--ALKKGLESGQLYCQRCFRLRHYNEIAPVD------ 59
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
+S D+ R+ LS + +L+V +VD+ DFNGS + + G NP++LV K D+
Sbjct: 60 -----ISDDDFRKLLSQISDSNSLVVYVVDMFDFNGSLIPGLHRFIGDNPVLLVGNKEDV 114
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
PK + + +W+ + + V +TS+K+ + + + + ++K +KGRDVY++G
Sbjct: 115 FPKSIKRHRMKEWLRQQAKANGILPEDVVITSAKNASSVEALFNAVEKLRKGRDVYVVGV 174
Query: 281 ANVGKSAFINALLK-KMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS IN+L+ + G +D S PGTTL I+I F L DTP
Sbjct: 175 TNVGKSTLINSLIAIRNGIKDVITT---------SRFPGTTLDRIEI-PFDDHSNLIDTP 224
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ + A V+ AEDL ++PQ ++ + F + S+ T+F G L R
Sbjct: 225 GIIHADQMAHVLAAEDLKYVSPQKTIKPRVFQLNSQQ--------------TLFVGALAR 270
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D E +T Y +L V+ + AD FY+K G LTPP A+
Sbjct: 271 FDYEH--SEGSVTAYFDNNLMVHRTKLENADNFYEKHAGELLTPPTADNLAK------MP 322
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
+L+ +F + SD+ GLGWISV
Sbjct: 323 KLVAHQFSADQD--SDIVFEGLGWISV 347
>gi|315222440|ref|ZP_07864341.1| ribosome biogenesis GTPase YqeH [Streptococcus anginosus F0211]
gi|315188464|gb|EFU22178.1| ribosome biogenesis GTPase YqeH [Streptococcus anginosus F0211]
Length = 368
Score = 174 bits (442), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 124/387 (32%), Positives = 190/387 (49%), Gaps = 48/387 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGAP+QT D GY E K + + C RC L H + IT V
Sbjct: 6 CIGCGAPIQTKYKDRLGYTPQSALE---KGMETGELYCQRCFRLRHYNEITDV------- 55
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
Q D LR L + AL+V +VDI DFNGS + + N ++LV K D+
Sbjct: 56 ---QLTDDDFLR-LLHEVGDSNALVVNVVDIFDFNGSVIPGLPRFVAGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + V W+ E ++ L + V LTS+++ I + +I++ +KGRDVY++G
Sbjct: 112 LPKSVKTSKVAQWLTERAHEEGLRPVDVVLTSAQNKQAIKELIEKIEQYRKGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G+++ S PGTTL I+I G +YDTP
Sbjct: 172 TNVGKSTLINAIIQEITGDKEIITT---------SRFPGTTLDKIEI-PLADGSHIYDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + A++L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLSAKNLKYISPKKEIKPKTYQLNPEQ--------------TLFLGGLGR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + T Y L+++ A EFY+K +G LTPP K+ ++ + + E
Sbjct: 268 FDFVSG-DKQGFTAYFDNELKLHRTKLAGAGEFYEKHVGSLLTPPSKKEVSDFPQLVKHE 326
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
+E K +DV SGLGWI V
Sbjct: 327 LKIEAK--------TDVVFSGLGWIRV 345
>gi|322386055|ref|ZP_08059694.1| GTP-binding protein [Streptococcus cristatus ATCC 51100]
gi|417922565|ref|ZP_12566053.1| ribosome biogenesis GTPase YqeH [Streptococcus cristatus ATCC
51100]
gi|321269899|gb|EFX52820.1| GTP-binding protein [Streptococcus cristatus ATCC 51100]
gi|342832662|gb|EGU66957.1| ribosome biogenesis GTPase YqeH [Streptococcus cristatus ATCC
51100]
Length = 368
Score = 174 bits (442), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 123/387 (31%), Positives = 189/387 (48%), Gaps = 48/387 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG P+QT + GY E K + + C RC L H + I+ V
Sbjct: 6 CIGCGVPIQTEDKGKLGYTPQSALE---KGLEIGELYCQRCFRLRHYNEISDV------- 55
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
Q D LR L + AL+V +VDI DFNGS + + N ++LV K D+
Sbjct: 56 ---QLTDDDFLR-LLHEVGDSDALVVNVVDIFDFNGSVIPGLPRFVAGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + V W+ E ++ L + V LTS+++ I + +I+ +KGRDVY++G
Sbjct: 112 LPKSVKDSKVTQWLTERAHEEGLRPVDVVLTSAQNKQAIKDLIDKIEHCRKGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G++D S PGTTL I+I G +YDTP
Sbjct: 172 TNVGKSTLINAIIQEITGDKDVITT---------SRFPGTTLDKIEI-PLADGSHIYDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + A++L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLSAKNLKYVSPKKEIKPKTYQLNPEQ--------------TLFLGGLGR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + T Y L+++ + A FY K +G L PP+GK+K E + L
Sbjct: 268 FDFV-AGDKQGFTAYFDNELKLHRTKLEGASGFYDKHVGSLLVPPVGKEKEE-FPSL--- 322
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
+K E T + +D+ SGLGWI V
Sbjct: 323 ----VKHEFTIKDKTDIVFSGLGWIRV 345
>gi|400289434|ref|ZP_10791463.1| GTP-binding protein YqeH [Streptococcus ratti FA-1 = DSM 20564]
gi|399922072|gb|EJN94887.1| GTP-binding protein YqeH [Streptococcus ratti FA-1 = DSM 20564]
Length = 368
Score = 174 bits (442), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 131/430 (30%), Positives = 200/430 (46%), Gaps = 73/430 (16%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT E + GY E K + V C RC L H + IT V
Sbjct: 6 CIGCGAQIQTEEKNRAGYTPQSALE---KGLETGEVYCQRCFRLRHYNEITDV------- 55
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
+S DE + L + AL+V +VDI DFNGS + + N ++LV K D+
Sbjct: 56 ----HISDDEFLKLLHEVGDSSALVVNVVDIFDFNGSVIPGLPRFISGNDLLLVGNKADI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + V W+ E ++ L L V LTS+++ I + + I+K +KGRDVY++G
Sbjct: 112 LPKSVKASKVKQWLTERAHEEGLRPLDVLLTSAQNHYAIKELIASIEKLRKGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G++D S PGTTL I+I G ++DTP
Sbjct: 172 TNVGKSTLINAIIREITGDKDVITT---------SRFPGTTLDKIEI-PLDDGSYIFDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + A+ L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLSAKALKYISPKKEIKPKTYQLNPEQ--------------TLFLGGLGR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D L+ + T Y +L+V+ AD FY+K G LTPP D+E
Sbjct: 268 FDFLQG-NKQGFTAYFDNNLKVHRTKLAGADAFYKKHAGELLTPP------------DKE 314
Query: 460 RLLE----IKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPK 515
L + ++ E +D+ SGLGWI + +G+ +A P+
Sbjct: 315 ELADFPQLVRHEFAVDGKTDIVFSGLGWIRL-----------------AGQAKIAAWAPQ 357
Query: 516 PVEVFVRNPM 525
V V R +
Sbjct: 358 GVAVVTRKAL 367
>gi|418035789|ref|ZP_12674231.1| hypothetical protein LDBUL1519_00931 [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1519]
gi|354689355|gb|EHE89353.1| hypothetical protein LDBUL1519_00931 [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1519]
Length = 378
Score = 174 bits (442), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 121/386 (31%), Positives = 187/386 (48%), Gaps = 46/386 (11%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA LQ+ + PGY+ P + K ++ + + V C RC L H + I V
Sbjct: 16 CIGCGAVLQSQDKQLPGYL-PASALAKVENGEREEVYCQRCFRLRHYNEIMPVS------ 68
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
+ D+ L+ + +KALIV +VD+ DF+ S ++ ++ G N ILV K+DL
Sbjct: 69 -----LDNDDFLALLNTMAEKKALIVNVVDLFDFSNSLISSLKRFVGTNDFILVGNKLDL 123
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
PK + + + DW+ + + L + L S+ + + + K + +DVY +G+
Sbjct: 124 FPKNSKESKIKDWMRQEANRMGLYPKDIFLISAAKKKKLDTLIDYLNKHSQDQDVYFVGT 183
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS INA++ +MG+ S PGTTL I+I G L DTPG
Sbjct: 184 TNVGKSTLINAIIDEMGDVQDLIT--------TSRFPGTTLDQIEI-PLDNGHFLVDTPG 234
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ + A+ + +DL +P+ L+ ++ + L G TIF GL RI
Sbjct: 235 ILTDKQLASRLDPKDLDLASPKKPLKPATYQL--------------LPGNTIFLAGLGRI 280
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D LK P T T Y + + ++ T+KADEFYQK +G L+PP KG +
Sbjct: 281 DYLKG-PSTSFTIYAARGMYIHRTKTEKADEFYQKHVGELLSPPGPNSDLPPLKGQE--- 336
Query: 461 LLEIKFEDTERPASDVAISGLGWISV 486
IK+ SDV +G+G+I+V
Sbjct: 337 -YSIKYR------SDVLFAGVGFITV 355
>gi|422844094|ref|ZP_16890804.1| GTP-binding protein [Lactobacillus delbrueckii subsp. lactis DSM
20072]
gi|325685794|gb|EGD27867.1| GTP-binding protein [Lactobacillus delbrueckii subsp. lactis DSM
20072]
Length = 378
Score = 174 bits (442), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 121/386 (31%), Positives = 186/386 (48%), Gaps = 46/386 (11%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA LQ+ + PGY+ P + K ++ + V C RC L H + I V
Sbjct: 16 CIGCGAALQSQDKQLPGYL-PASALAKVENGERDEVYCQRCFRLRHYNEIMPVS------ 68
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
+ D+ L+ + +KALIV +VD+ DF+ S ++ ++ G N ILV K+DL
Sbjct: 69 -----LDNDDFLALLNTMAEKKALIVNVVDLFDFSNSLISSLKRFVGTNDFILVGNKLDL 123
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
PK + + + DW+ + + L + L S+ + + + K + +DVY +G+
Sbjct: 124 FPKNSKESKIKDWMRQEANRMGLYPKDIFLISAAKKKKLDTLIDYLNKHSQDQDVYFVGT 183
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS INA++ +MG+ S PGTTL I+I G L DTPG
Sbjct: 184 TNVGKSTLINAIIDEMGDVQDLIT--------TSRFPGTTLDQIEI-PLDNGHFLVDTPG 234
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ + A+ + +DL +P+ L+ ++ + L G TIF GL RI
Sbjct: 235 ILTDKQLASRLDPKDLDLASPKKPLKPATYQL--------------LPGNTIFLAGLGRI 280
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D LK P T T Y + + ++ T+KADEFYQK +G L+PP KG +
Sbjct: 281 DYLKG-PSTSFTIYAARGMYIHRTKTEKADEFYQKHVGELLSPPGPNSDLPPLKGQE--- 336
Query: 461 LLEIKFEDTERPASDVAISGLGWISV 486
IK+ SDV +G+G+I+V
Sbjct: 337 -YSIKYR------SDVLFAGVGFITV 355
>gi|322392356|ref|ZP_08065817.1| GTP-binding protein [Streptococcus peroris ATCC 700780]
gi|321144891|gb|EFX40291.1| GTP-binding protein [Streptococcus peroris ATCC 700780]
Length = 368
Score = 174 bits (442), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 119/387 (30%), Positives = 193/387 (49%), Gaps = 48/387 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT++ G+ E K + V C RC L H + IT V
Sbjct: 6 CIGCGATIQTTDKTGLGFTPQSALE---KGLEIGEVYCQRCFRLRHYNEITDVQ------ 56
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ + L + AL+V ++DI DFNGS + + N ++LV K D+
Sbjct: 57 -----LTDDDFLKLLHEVGDSDALVVNVIDIFDFNGSVIPGLPRFVSGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W++E ++ L + V LTS+++ I V +I+ +KGRDVY++G
Sbjct: 112 LPKSVKHGKISQWLMERAHEEGLRPVDVVLTSAQNKQAIREVIDKIEYYRKGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G+++ S PGTTL I+I G +YDTP
Sbjct: 172 TNVGKSTLINAIIQEITGDQNVITT---------SRFPGTTLDKIEI-PLDDGSYIYDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + A++L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLTAKNLKYVSPKKEIKPKTYQLNPEQ--------------TLFLGGLGR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + F+ L+++ + A++FY K LG LTPP K+K D
Sbjct: 268 FDFIAGEKQGFTAFF-DNELKLHRTKLEGANDFYDKHLGTLLTPPNSKEKE------DFP 320
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
+L+E F ++ +D+ ISGLGWI V
Sbjct: 321 KLVEYVFNIKDK--TDLVISGLGWIRV 345
>gi|104774345|ref|YP_619325.1| GTP-binding protein YqeH [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
gi|116514440|ref|YP_813346.1| GTP-binding protein YqeH [Lactobacillus delbrueckii subsp.
bulgaricus ATCC BAA-365]
gi|103423426|emb|CAI98299.1| GTP-binding protein [Lactobacillus delbrueckii subsp. bulgaricus
ATCC 11842]
gi|116093755|gb|ABJ58908.1| Predicted GTPase [Lactobacillus delbrueckii subsp. bulgaricus ATCC
BAA-365]
Length = 369
Score = 174 bits (442), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 121/386 (31%), Positives = 187/386 (48%), Gaps = 46/386 (11%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA LQ+ + PGY+ P + K ++ + + V C RC L H + I V
Sbjct: 7 CIGCGAALQSQDKQLPGYL-PASALAKVENGEREEVYCQRCFRLRHYNEIMPVS------ 59
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
+ D+ L+ + +KALIV +VD+ DF+ S ++ ++ G N ILV K+DL
Sbjct: 60 -----LDNDDFLALLNTMAEKKALIVNVVDLFDFSNSLISSLKRFVGTNDFILVGNKLDL 114
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
PK + + + DW+ + + L + L S+ + + + K + +DVY +G+
Sbjct: 115 FPKNSKESKIKDWMRQEANRMGLYPKDIFLISAAKKKKLDTLIDYLNKHSQDQDVYFVGT 174
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS INA++ +MG+ S PGTTL I+I G L DTPG
Sbjct: 175 TNVGKSTLINAIIDEMGDVQDLIT--------TSRFPGTTLDQIEI-PLDNGHFLVDTPG 225
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ + A+ + +DL +P+ L+ ++ + L G TIF GL RI
Sbjct: 226 ILTDKQLASRLDPKDLDLASPKKPLKPATYQL--------------LPGNTIFLAGLGRI 271
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D LK P T T Y + + ++ T+KADEFYQK +G L+PP KG +
Sbjct: 272 DYLKG-PSTSFTIYAARGMYIHRTKTEKADEFYQKHVGELLSPPGPNSDLPPLKGQE--- 327
Query: 461 LLEIKFEDTERPASDVAISGLGWISV 486
IK+ SDV +G+G+I+V
Sbjct: 328 -YSIKYR------SDVLFAGVGFITV 346
>gi|336394026|ref|ZP_08575425.1| GTPase YqeH [Lactobacillus coryniformis subsp. torquens KCTC 3535]
Length = 373
Score = 174 bits (442), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 130/387 (33%), Positives = 186/387 (48%), Gaps = 48/387 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT++ A GY E K V C RC L H + I+ V
Sbjct: 11 CIGCGAQIQTTDPAAAGYTPASALE---KGLAAGEVYCQRCFRLRHYNEISDVR------ 61
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ + L+ + ALIV ++DI DF+GS + + G NP++LV KVD+
Sbjct: 62 -----LTDDDFLKLLTQIGDTDALIVNVIDIFDFSGSIIPGLHRFVGKNPVLLVGNKVDV 116
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK V W+ E L L V LTS+KS + + + I K + GRDVY++G
Sbjct: 117 LPKSVKRGKVRHWLQEQAHAVGLRPLDVLLTSAKSGYELDELLAAIDKYRAGRDVYVVGV 176
Query: 281 ANVGKSAFINALLKK-MGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS IN ++K+ G +D S PGTTL I+I G +L DTP
Sbjct: 177 TNVGKSTLINQIIKRTTGTQDLITT---------SRFPGTTLDKIEI-PLDDGHQLIDTP 226
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ + A + +DL +APQ ++ ++F + SE T+F GGL R
Sbjct: 227 GIIHREQMAYYLGPKDLRLVAPQKPIKPKTFQLNSEQ--------------TLFLGGLAR 272
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + P T T Y +L V+ AD+FY ++ G L PP + A D
Sbjct: 273 FDYERG-PHTGFTLYLDNNLLVHRTKLSNADDFYDRQAGKLLQPPRPNELA------DFP 325
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
L I+F T + SD+ +GLGWI+V
Sbjct: 326 PLARIQF--TPKVKSDLVFAGLGWITV 350
>gi|387784745|ref|YP_006070828.1| putative GTP binding protein [Streptococcus salivarius JIM8777]
gi|338745627|emb|CCB95993.1| putative GTP binding protein [Streptococcus salivarius JIM8777]
Length = 372
Score = 174 bits (442), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 120/388 (30%), Positives = 191/388 (49%), Gaps = 48/388 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT + + GY + KK + + C RC L H + I V
Sbjct: 6 CIGCGAQIQTEDKEKAGYTPASSI---KKAEETGELYCQRCFRLRHYNEIVDV------- 55
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ DE + L + AL+V +VDI DFNGS + + N ++LV K D+
Sbjct: 56 ----HITDDEFLKLLHEVGDSDALVVNVVDIFDFNGSIIPGLSRFVSGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK V W+ E ++ + + V LTS+++ I + I+K +KGRDVY++G
Sbjct: 112 LPKSVKDGKVTQWLTERAHEEGMRPVDVMLTSAQNHHAIKELIQRIEKLRKGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA++K++ G++D S PGTTL I+I G ++DTP
Sbjct: 172 TNVGKSTLINAIIKEITGDKDIITT---------SRFPGTTLDKIEI-PLDDGTYIFDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + A+DL ++P+ ++ +++ + + G T+F GGL R
Sbjct: 222 GIIHRHQMAHYLSAKDLKYVSPKKEIKPKTYQLNA--------------GQTLFLGGLGR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + F+ +L+++ + AD FY K +G L PP K A D
Sbjct: 268 FDFIDGNKQGFTAFF-DNNLKLHRTKLEGADAFYDKHVGSLLVPPGPKDLA------DFP 320
Query: 460 RLLEIKFEDTERPASDVAISGLGWISVE 487
+L+ +F T + +D+ SGLGWI V+
Sbjct: 321 KLVRHEF--TVKDKTDIVFSGLGWIRVQ 346
>gi|422821793|ref|ZP_16869986.1| GTP-binding protein [Streptococcus sanguinis SK353]
gi|324990744|gb|EGC22680.1| GTP-binding protein [Streptococcus sanguinis SK353]
Length = 368
Score = 174 bits (442), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 126/392 (32%), Positives = 194/392 (49%), Gaps = 49/392 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGAP+QT + GY E K + + C RC L H + I+ V
Sbjct: 6 CIGCGAPIQTEDKGKLGYTPQSALE---KGLETGELYCQRCFRLRHYNEISDV------- 55
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
Q D LR L + AL+V +VDI DFNGS + + N ++LV K D+
Sbjct: 56 ---QLTDDDFLR-LLHEVGDSDALVVNVVDIFDFNGSVIPGLPRFVAGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + V W+ E ++ L + V LTS+++ I + +I+ +KGRDVY++G
Sbjct: 112 LPKSVKDSKVTQWLTERAHEEGLRPVDVVLTSAQNKQAIKDLIDKIEHCRKGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G++D S PGTTL I+I G +YDTP
Sbjct: 172 TNVGKSTLINAIIQEITGDKDIITT---------SRFPGTTLDKIEI-PLADGSHIYDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + A++L ++P+ ++ +++ + N+ T+F GGL R
Sbjct: 222 GIIHRHQMAHYLSAKNLKYISPKKEIKPKTYQL-----NPNQ---------TLFLGGLGR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + T Y L+++ + A +FY K +G L PP+GK+K E + L
Sbjct: 268 FDFV-AGDKQGFTAYFDNELKLHRTKLEGASDFYDKHVGGLLVPPVGKEKEE-FPAL--- 322
Query: 460 RLLEIKFEDTERPASDVAISGLGWISVE-PVR 490
+K E T + +D+ SGLGWI V P R
Sbjct: 323 ----VKHEFTIKDKTDIVFSGLGWIRVSGPAR 350
>gi|418070903|ref|ZP_12708178.1| GTPase YqeH [Lactobacillus rhamnosus R0011]
gi|423078757|ref|ZP_17067434.1| ribosome biogenesis GTPase YqeH [Lactobacillus rhamnosus ATCC
21052]
gi|357540323|gb|EHJ24340.1| GTPase YqeH [Lactobacillus rhamnosus R0011]
gi|357549045|gb|EHJ30893.1| ribosome biogenesis GTPase YqeH [Lactobacillus rhamnosus ATCC
21052]
Length = 374
Score = 174 bits (442), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 125/387 (32%), Positives = 186/387 (48%), Gaps = 48/387 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA LQT++ PGY+ T K + C RC L H + I V
Sbjct: 12 CIGCGAILQTTDPKKPGYLPAATL---AKAEADDDIYCQRCFRLRHYNEIAPVT------ 62
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ L+ + ALIV ++DI DFNGS + + G NP+ILV K D+
Sbjct: 63 -----LTDDDFLRLLNAIGESNALIVNVIDIFDFNGSVIPGLHRFVGDNPVILVGNKADV 117
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + N + +W+ + + L ++ L S+K G+ + + I+K ++ RDVY++G
Sbjct: 118 LPKSLNPNKLKNWLQQQAKAQGLRPVTTLLASAKKGFGVDELLTAIEKYREHRDVYVVGV 177
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
N GKS IN ++K++ G D S PGTTL I I G L DTP
Sbjct: 178 TNTGKSTLINRIIKQLTGVEDLITT---------SRFPGTTLDRIMI-PLDDGQSLIDTP 227
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A V +DL ++P S ++ ++ + NE G TIF GGL R
Sbjct: 228 GIIHRHQMAHFVGPKDLKLVSPTSVIKPATYQL-------NE-------GQTIFLGGLAR 273
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D L+ ++ Y L ++ ADEFYQK +G L PP + R+
Sbjct: 274 FDYLRGGRQS-FVIYADTQLPLHRTKLINADEFYQKHVGGLLAPPQADEV--------RD 324
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
++FE T + SD+ +GLGWI+V
Sbjct: 325 FPPLVRFEFTPKEKSDLVFAGLGWITV 351
>gi|404328442|ref|ZP_10968890.1| GTPase YqeH [Sporolactobacillus vineae DSM 21990 = SL153]
Length = 366
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 123/389 (31%), Positives = 188/389 (48%), Gaps = 55/389 (14%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG +QT + APGY + V+C RC L H + + V
Sbjct: 6 CNGCGIKIQTEDEGAPGYAPASAL-------RHDPVICRRCFRLQHYNEVQDVP------ 52
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ + LS + K L+V LVDI DF+GS++ ++ G NP+++V K+DL
Sbjct: 53 -----MTGDDFLKLLSQISGRKGLVVYLVDIFDFSGSWVPGLQRFVGNNPVLMVGNKLDL 107
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK T+ N + W+ + + L L V L S++ GI V E+ +KG+D+Y++G
Sbjct: 108 LPKSTNPNKLTSWLRRSAKELGLRPLDVLLMSAEKNMGIDQVIEEMNDYRKGKDIYVVGV 167
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS FIN L++ +G+++ S PGTTL I I G LYDTPG
Sbjct: 168 TNVGKSTFINHLIRAVGQQEGTITT--------SHFPGTTLDFIGI-PLDDGQMLYDTPG 218
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ H+ A + +D + P ++ F + NE G T+F GG+ RI
Sbjct: 219 IVNLHQAAHFISEKDYRQVMPTREIKPVVFQL-------NE-------GQTLFLGGMGRI 264
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D + L Y L V+ TD AD+ + ++ G L+PP + G
Sbjct: 265 DYIGP-GRRSLIVYTSNRLTVHRTRTDHADDLFHRQYGQLLSPP---SRTRG-------- 312
Query: 461 LLEIKFED--TERPASDVAISGLGWISVE 487
L E+K D T+ +D+ SGLGW++V+
Sbjct: 313 LPELKSYDFRTDGLNTDIVFSGLGWVTVK 341
>gi|157149789|ref|YP_001449761.1| GTP-binding protein YqeH [Streptococcus gordonii str. Challis
substr. CH1]
gi|157074583|gb|ABV09266.1| GTP-binding protein [Streptococcus gordonii str. Challis substr.
CH1]
Length = 368
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 125/392 (31%), Positives = 191/392 (48%), Gaps = 49/392 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT + GY E K + + C RC L H + I+ V
Sbjct: 6 CIGCGATIQTEDKGKLGYTPQSALE---KGLETGELYCQRCFRLRHYNEISDV------- 55
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
Q D LR L + AL+V +VDI DFNGS + + N ++LV K D+
Sbjct: 56 ---QLTDDDFLR-LLHEVGDSDALVVNVVDIFDFNGSVIPGLPRFVAGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK V W+ E ++ L + V LTS+++ I + +I+ +KGRDVY++G
Sbjct: 112 LPKSVKDGKVTQWLTERAHEEGLRPVDVVLTSAQNKQAIKDLIDKIEHSRKGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G++D S PGTTL I+I G +YDTP
Sbjct: 172 TNVGKSTLINAIIQEITGDKDIITT---------SRFPGTTLDKIEI-PLADGSHIYDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + A++L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLSAKNLKYISPKKEIKPKTYQLNPEQ--------------TLFLGGLGR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + T Y L+++ + A +FY K +G L PP+GK+K E + L
Sbjct: 268 FDFV-AGDKQGFTAYFDNELKLHRTKLEGASDFYDKHVGGLLVPPVGKEKEE-FPAL--- 322
Query: 460 RLLEIKFEDTERPASDVAISGLGWISVE-PVR 490
+K E T + +D+ SGLGWI V P R
Sbjct: 323 ----VKHEFTIKDKTDIVFSGLGWIRVSGPAR 350
>gi|336395193|ref|ZP_08576592.1| GTPase YqeH [Lactobacillus farciminis KCTC 3681]
Length = 370
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 129/409 (31%), Positives = 197/409 (48%), Gaps = 58/409 (14%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA LQT + D PG+V T + K K +LC RC L + + IT V
Sbjct: 9 CIGCGAKLQTEDKDKPGFVQASTLK-KYTEDDSKELLCKRCFRLRNYNEITDVD------ 61
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
VS D+ + L + + AL+V +VDI D+ GS + ++ G I++V KVDL
Sbjct: 62 -----VSDDDFLKLLDSISSKDALVVNVVDIFDYEGSVIPGLQRFVGDKKILMVGNKVDL 116
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LP + N + +W+ + + + + + + S+ I + I+K + G+DVY++G+
Sbjct: 117 LPASVNQNRLLNWLQQKSKENGIKSVDQIMVSAVKGINIDKLMEMIEKYRDGKDVYVVGT 176
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
N GKS IN ++ ++ K S PGTTL I I G L DTPG
Sbjct: 177 TNTGKSTLINRII--------SSNSDIKDLITTSRFPGTTLDRIDI-PLDDGHSLIDTPG 227
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ ++ A ++A+DL + P+ LR +F + +G TIF GL R+
Sbjct: 228 IIHRYQLAHFLNAKDLKTVTPKKPLRPATFQL--------------RDGQTIFVAGLARL 273
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D L T +TFY + L ++ T ADEFY+K LG LTPP ++ +K
Sbjct: 274 DFLN--ERTNVTFYVNQGLPLHRTKTVNADEFYEKHLGDILTPPTDIKEFPKFKS----- 326
Query: 461 LLEIKFEDTERPASDVAISGLGWISV-----------EPVRRSIRNSDI 498
+I F E+ SD+ I GLGW+++ + V SIRN+ I
Sbjct: 327 --QI-FSAHEK--SDIVIYGLGWVTIPAGTKVKAYVPDGVHVSIRNAII 370
>gi|262282075|ref|ZP_06059844.1| GTP-binding protein YqeH [Streptococcus sp. 2_1_36FAA]
gi|262262529|gb|EEY81226.1| GTP-binding protein YqeH [Streptococcus sp. 2_1_36FAA]
Length = 368
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 126/392 (32%), Positives = 191/392 (48%), Gaps = 49/392 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT + GY E K + + C RC L H + I+ V
Sbjct: 6 CIGCGATIQTEDKGKLGYTPQSALE---KGLETGELYCQRCFRLRHYNEISDV------- 55
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
Q D LR L + AL+V +VDI DFNGS + + N ++LV K D+
Sbjct: 56 ---QLTDDDFLR-LLHEVGDSDALVVNVVDIFDFNGSVIPGLPRFVAGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + V W+ E ++ L + V LTS+++ I + +I+ +KGRDVY++G
Sbjct: 112 LPKSVKDSKVTQWLTERAHEEGLRPVDVVLTSAQNKQAIKDLIDKIEHCRKGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G++D S PGTTL I+I G +YDTP
Sbjct: 172 TNVGKSTLINAIIQEITGDKDIITT---------SRFPGTTLDKIEI-PLADGSHIYDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + A++L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLSAKNLKYVSPKKEIKPKTYQLNPEQ--------------TLFLGGLGR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + T Y L+++ A EFY K +G L PP+GK+K E + L
Sbjct: 268 FDFV-AGDKQGFTAYFDNELKLHRTKLQGASEFYDKHVGSLLVPPVGKEKEE-FPAL--- 322
Query: 460 RLLEIKFEDTERPASDVAISGLGWISVE-PVR 490
+K E T + +D+ SGLGWI V P R
Sbjct: 323 ----VKHEFTIKDKTDIVFSGLGWIRVSGPAR 350
>gi|357636021|ref|ZP_09133896.1| ribosome biogenesis GTPase YqeH [Streptococcus macacae NCTC 11558]
gi|357584475|gb|EHJ51678.1| ribosome biogenesis GTPase YqeH [Streptococcus macacae NCTC 11558]
Length = 368
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 130/426 (30%), Positives = 202/426 (47%), Gaps = 65/426 (15%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA LQT+ D GY E K + + C RC L H + I V
Sbjct: 6 CIGCGACLQTTAPDQAGYTPKSALE---KGLESGELYCQRCFRLRHYNDIMDV------- 55
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
+S D+ + L + AL+V +VDI DFNGS + ++ N ++LV K D+
Sbjct: 56 ----HLSDDDFLKILHEVGDSNALVVNVVDIFDFNGSVIPGLQRFISGNDLLLVGNKSDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LP+ + V W+ E ++ L+ L V LTS+++ I + + I+ ++GRDVY++G
Sbjct: 112 LPRSVKTSKVRQWLTERAHEEGLHPLDVMLTSAQNKQAIKDLIAAIETFRQGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G++D A S PGTTL I+I G ++DTP
Sbjct: 172 TNVGKSTLINAMIQELTGDKDVITA---------SRFPGTTLDKIEI-PLDDGSYIFDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + A+DL + P+ L+ +++ + +E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLSAKDLKYINPKKELKPKTYQLNAEQ--------------TLFLGGLAR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D ++ T Y +L+++ AD FY K +G LTPP K++ + L R
Sbjct: 268 FDFIEG-ERQGFTAYFDNNLKLHRTKLAFADAFYDKHVGSLLTPP-DKKEVAAFPQLVRH 325
Query: 460 RLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVEV 519
E++ E+ +D+ SGLGWI + G LA PK V V
Sbjct: 326 ---ELRIEEK----TDLVFSGLGWICAK-----------------GPARLAAWAPKGVAV 361
Query: 520 FVRNPM 525
R +
Sbjct: 362 VTRKAL 367
>gi|261418457|ref|YP_003252139.1| GTP-binding protein YqeH [Geobacillus sp. Y412MC61]
gi|319767582|ref|YP_004133083.1| ribosome biogenesis GTPase YqeH [Geobacillus sp. Y412MC52]
gi|261374914|gb|ACX77657.1| ribosome biogenesis GTPase YqeH [Geobacillus sp. Y412MC61]
gi|317112448|gb|ADU94940.1| ribosome biogenesis GTPase YqeH [Geobacillus sp. Y412MC52]
Length = 369
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 130/425 (30%), Positives = 192/425 (45%), Gaps = 63/425 (14%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +Q + GY E ++ ++C RC L H + + V
Sbjct: 7 CIGCGAAIQFDDPKKAGYAPKSVLEKDEEE-----IICQRCFRLKHYNEVQDVP------ 55
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
+ + L + KAL+V +VDI DFNGS++ + A NPI+LV K DL
Sbjct: 56 -----LDDSDFLNMLHRIGESKALVVNIVDIFDFNGSWIPGLPRFAAENPILLVGNKADL 110
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LP+ + + W+ + L + V L S+ G+ V I + ++G DVY++G
Sbjct: 111 LPRSVKYPKLLRWMRRMAEELGLCPVDVCLVSAAKGIGMAKVMEAINRYREGGDVYVVGC 170
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS FIN ++++ A + S PGTTL I+I GG LYDTPG
Sbjct: 171 TNVGKSTFINRIIEE--------ATGKGNVITTSYFPGTTLDMIEI-PLEGGATLYDTPG 221
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ HH+ A V A DL + P+ + + + + NE G T+F+GGL R+
Sbjct: 222 IINHHQMAHFVDARDLKIITPKREIHPRVYQL-------NE-------GQTLFFGGLARL 267
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D +K Y L V+ +KAD Y +LG L+PP + AE + R
Sbjct: 268 DYIKG-GRRSFVCYMANELTVHRTKLEKADSLYANQLGDLLSPPNKRYAAEFPPLVPRS- 325
Query: 461 LLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVEVF 520
L +K ER +D+ SGLGW++ L VH PK V+VF
Sbjct: 326 -LSVK----ER-KTDIVFSGLGWVT----------------CNDPGAQLVVHAPKGVDVF 363
Query: 521 VRNPM 525
+R +
Sbjct: 364 IRQSL 368
>gi|323353254|ref|ZP_08087787.1| GTP-binding protein [Streptococcus sanguinis VMC66]
gi|322121200|gb|EFX92963.1| GTP-binding protein [Streptococcus sanguinis VMC66]
Length = 368
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 126/392 (32%), Positives = 194/392 (49%), Gaps = 49/392 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGAP+QT E GY E K + + C RC L H + I+ V
Sbjct: 6 CIGCGAPIQTEEKGKLGYTPQSALE---KGLETGELYCQRCFRLRHYNEISDV------- 55
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
Q D LR L + AL+V +VDI DFNGS + + N ++LV K D+
Sbjct: 56 ---QLTDDDFLR-LLHEVGDSDALVVNVVDIFDFNGSVIPGLPRFVAGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + V W+ E ++ L + V LTS+++ I + +I+ +KGRDVY++G
Sbjct: 112 LPKSVKDSKVTQWLTERAHEEGLRPVDVVLTSAQNKQAIKDLIDKIEHCRKGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G++D S PGTTL I+I G +YDTP
Sbjct: 172 TNVGKSTLINAIIQEITGDKDIITT---------SRFPGTTLDKIEI-PLADGSHIYDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + A++L ++P+ ++ +++ + N+ T+F GGL R
Sbjct: 222 GIIHRHQMAHYLSAKNLKYISPKKEIKPKTYQL-----NPNQ---------TLFLGGLGR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + T Y L+++ + A +FY K +G L PP+GK+K E + L
Sbjct: 268 FDFV-AGDKQGFTAYFDNELKLHRTKLEGASDFYDKHVGGLLVPPVGKEKEE-FPTL--- 322
Query: 460 RLLEIKFEDTERPASDVAISGLGWISVE-PVR 490
+K E T + +D+ SGLGW+ V P R
Sbjct: 323 ----VKHEFTIKDKTDIVFSGLGWLRVSGPAR 350
>gi|418018489|ref|ZP_12658045.1| putative GTPase YqeH [Streptococcus salivarius M18]
gi|345527338|gb|EGX30649.1| putative GTPase YqeH [Streptococcus salivarius M18]
Length = 372
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 120/388 (30%), Positives = 191/388 (49%), Gaps = 48/388 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT + + GY + KK + + C RC L H + I V
Sbjct: 6 CIGCGAQIQTEDKEKAGYTPASSI---KKAEETGELYCQRCFRLRHYNEIVDV------- 55
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ DE + L + AL+V +VDI DFNGS + + N ++LV K D+
Sbjct: 56 ----HITDDEFLKLLHEVGDSDALVVNVVDIFDFNGSIIPGLLRFVSGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK V W+ E ++ + + V LTS+++ I + I+K +KGRDVY++G
Sbjct: 112 LPKSVKDGKVTQWLTERAHEEGMRPVDVMLTSAQNHHAIKELIQRIEKLRKGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA++K++ G++D S PGTTL I+I G ++DTP
Sbjct: 172 TNVGKSTLINAIIKEITGDKDIITT---------SRFPGTTLDKIEI-PLDDGTYIFDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + A+DL ++P+ ++ +++ + + G T+F GGL R
Sbjct: 222 GIIHRHQMAHYLSAKDLKYVSPKKEIKPKTYQLNA--------------GQTLFLGGLGR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + F+ +L+++ + AD FY K +G L PP K A D
Sbjct: 268 FDFIDGNKQGFTAFF-DNNLKLHRTKLEGADAFYDKHVGSLLMPPRPKDLA------DFP 320
Query: 460 RLLEIKFEDTERPASDVAISGLGWISVE 487
+L ++ E T + +D+ SGLGWI V+
Sbjct: 321 KL--VRHEFTVKDKTDIVFSGLGWIRVQ 346
>gi|259503609|ref|ZP_05746511.1| GTP-binding protein [Lactobacillus antri DSM 16041]
gi|259168433|gb|EEW52928.1| GTP-binding protein [Lactobacillus antri DSM 16041]
Length = 372
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 133/426 (31%), Positives = 197/426 (46%), Gaps = 65/426 (15%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +Q+++S A GY KK + + C RC L H + I V
Sbjct: 10 CIGCGAVIQSTDSTALGYTPASAV---KKGLENNELYCQRCFRLRHYNEIAPVS------ 60
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ L +R ALIV +VDI DFNGS + + G NP++LV K DL
Sbjct: 61 -----LTDDDFLRLLGQIRDANALIVYVVDIFDFNGSLIPGLHRFVGDNPVLLVGNKEDL 115
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LP+ + DW+ + + + + L S+K I + + I+K + RDVY++G
Sbjct: 116 LPRSLRRPKLCDWIRQQANQAGIRPVDTVLVSAKKNHEIDELLATIEKYRHDRDVYVVGV 175
Query: 281 ANVGKSAFINALLK-KMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS IN ++K + G +D S PGTTL I+I G +L DTP
Sbjct: 176 TNVGKSTLINQIIKQRTGVQDLITT---------SRFPGTTLDEIEI-PLDDGHRLVDTP 225
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A V+ A+DL +APQ ++ +++ + G T+F GG+ R
Sbjct: 226 GIIHPHQMAHVLSAKDLKIVAPQKEIKPRTYQLDP--------------GQTVFIGGVAR 271
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D K P + Y +L ++ AD FY+K G LTPP + A + L RE
Sbjct: 272 FDFEKG-PHSGFVTYFDNNLTLHRTKLVNADRFYEKHRGGLLTPPTADELA-AFPPLVRE 329
Query: 460 RLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVEV 519
+F TE+ SD+ GLGW++V ++ +A VPK V
Sbjct: 330 -----EFRVTEK--SDIVFEGLGWVTV-----------------PADVTVAAWVPKGVAA 365
Query: 520 FVRNPM 525
VR M
Sbjct: 366 LVRKAM 371
>gi|55823525|ref|YP_141966.1| GTP-binding protein YqeH [Streptococcus thermophilus CNRZ1066]
gi|116628312|ref|YP_820931.1| GTP-binding protein YqeH [Streptococcus thermophilus LMD-9]
gi|386087223|ref|YP_006003097.1| Ribosome biogenesis GTPase YqeH [Streptococcus thermophilus ND03]
gi|386345319|ref|YP_006041483.1| hypothetical protein STH8232_1866 [Streptococcus thermophilus JIM
8232]
gi|387910325|ref|YP_006340631.1| GTP-binding protein YqeH [Streptococcus thermophilus MN-ZLW-002]
gi|445382105|ref|ZP_21427172.1| GTPase YqeH [Streptococcus thermophilus MTCC 5460]
gi|445394858|ref|ZP_21428906.1| GTPase YqeH [Streptococcus thermophilus MTCC 5461]
gi|55739510|gb|AAV63151.1| conserved hypothetical protein [Streptococcus thermophilus
CNRZ1066]
gi|116101589|gb|ABJ66735.1| Predicted GTPase [Streptococcus thermophilus LMD-9]
gi|312278936|gb|ADQ63593.1| Ribosome biogenesis GTPase YqeH [Streptococcus thermophilus ND03]
gi|339278780|emb|CCC20528.1| hypothetical protein STH8232_1866 [Streptococcus thermophilus JIM
8232]
gi|387575260|gb|AFJ83966.1| GTP-binding protein YqeH [Streptococcus thermophilus MN-ZLW-002]
gi|444748731|gb|ELW73685.1| GTPase YqeH [Streptococcus thermophilus MTCC 5461]
gi|444748809|gb|ELW73759.1| GTPase YqeH [Streptococcus thermophilus MTCC 5460]
Length = 372
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 120/388 (30%), Positives = 191/388 (49%), Gaps = 48/388 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT + + G+ + KK + + C RC L H + I V
Sbjct: 6 CIGCGAQIQTEDKEKAGFTPASSI---KKAEETGELYCQRCFRLRHYNEIVDV------- 55
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ DE + L + AL+V +VDI DFNGS + + N ++LV K D+
Sbjct: 56 ----HITDDEFLKLLHEVGDSDALVVNVVDIFDFNGSIIPGLSRFVSGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK V W+ E ++ + + V LTS+++ I + I+ +KGRDVY++G
Sbjct: 112 LPKSVKDGKVTQWLTERAHEEGMRPVDVMLTSAQNHHAIKELIQRIEALRKGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA++K++ G++D S PGTTL I+I G ++DTP
Sbjct: 172 TNVGKSTLINAIIKEITGDKDVITT---------SRFPGTTLDKIEI-PLDDGSYIFDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + A+DL ++P+ ++ +++ + + G T+F GGL R
Sbjct: 222 GIIHRHQMAHYLSAKDLKYVSPKKEIKPKTYQLNA--------------GQTLFLGGLGR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + F+ +L+++ D AD FY K +G L PP K+ A D
Sbjct: 268 FDFIDGDKQGFTAFF-DNNLKLHRTKLDGADAFYDKHVGSLLMPPGPKELA------DFP 320
Query: 460 RLLEIKFEDTERPASDVAISGLGWISVE 487
+L+ +F T + +DV SGLGWI V+
Sbjct: 321 KLVRHEF--TIKDKTDVVFSGLGWIRVQ 346
>gi|55821597|ref|YP_140039.1| GTP-binding protein YqeH [Streptococcus thermophilus LMG 18311]
gi|55737582|gb|AAV61224.1| conserved hypothetical protein [Streptococcus thermophilus LMG
18311]
Length = 372
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 120/388 (30%), Positives = 191/388 (49%), Gaps = 48/388 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT + + G+ + KK + + C RC L H + I V
Sbjct: 6 CIGCGAQIQTEDKEKAGFTPASSI---KKAEETGELYCQRCFRLRHYNEIVDV------- 55
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ DE + L + AL+V +VDI DFNGS + + N ++LV K D+
Sbjct: 56 ----HITDDEFLKLLYEVGDSDALVVNVVDIFDFNGSIIPGLSRFVSGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK V W+ E ++ + + V LTS+++ I + I+ +KGRDVY++G
Sbjct: 112 LPKSVKDGKVTQWLTERAHEEGMRPVDVMLTSAQNHHAIKELIQRIEALRKGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA++K++ G++D S PGTTL I+I G ++DTP
Sbjct: 172 TNVGKSTLINAIIKEITGDKDVITT---------SRFPGTTLDKIEI-PLDDGSYIFDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + A+DL ++P+ ++ +++ + + G T+F GGL R
Sbjct: 222 GIIHRHQMAHYLSAKDLKYVSPKKEIKPKTYQLNA--------------GQTLFLGGLGR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + F+ +L+++ D AD FY K +G L PP K+ A D
Sbjct: 268 FDFIDGDKQGFTAFF-DNNLKLHRTKLDGADAFYDKHVGSLLMPPGPKELA------DFP 320
Query: 460 RLLEIKFEDTERPASDVAISGLGWISVE 487
+L+ +F T + +DV SGLGWI V+
Sbjct: 321 KLVRHEF--TIKDKTDVVFSGLGWIRVQ 346
>gi|415885594|ref|ZP_11547522.1| GTP-binding protein YqeH [Bacillus methanolicus MGA3]
gi|387591263|gb|EIJ83582.1| GTP-binding protein YqeH [Bacillus methanolicus MGA3]
Length = 368
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 135/428 (31%), Positives = 200/428 (46%), Gaps = 71/428 (16%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG +QT + GY E ++ V+C RC L H + + V
Sbjct: 8 CIGCGVKIQTEDPRELGYAPKSALEKEQ-------VICQRCFRLKHYNEVQDVN------ 54
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ + L+ + + ALIVK+VDI DFNGS+L + AG N I+LV KVDL
Sbjct: 55 -----LTDDDFLKILNEIGKSDALIVKIVDIFDFNGSWLPGLHRFAGNNKILLVGNKVDL 109
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK N + W+ + + L V L S+ I A+ I + ++G+DVY++G
Sbjct: 110 LPKSVKHNKLIHWMKQEARELGLKPEEVFLVSAAKGHFIKETAAAIDEYRQGKDVYVVGC 169
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGK-LYDT 338
NVGKS FIN ++K++ GE D S PGTTL I+I L GK L DT
Sbjct: 170 TNVGKSTFINRMIKEVTGEGDLITT---------SHFPGTTLDIIKIP--LDDGKFLMDT 218
Query: 339 PGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLV 398
PG+ HH+ A V DL + P+ ++ + + + NE G T+F+GGL
Sbjct: 219 PGIINHHQMAHYVDKRDLKIITPKKEIKPKVYQL-------NE-------GQTLFFGGLA 264
Query: 399 RIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDR 458
R D L T Y L V+ +KA E Y +G L+PP K++ + + L R
Sbjct: 265 RFDYL-TGGRRSFTCYLSNELIVHRTKLEKASELYNNHVGEMLSPP-RKEQLDSFPKLVR 322
Query: 459 ERLLEIKFEDTERPASDVAISGLGWISV-EPVRRSIRNSDINLESTSGELHLAVHVPKPV 517
+ + +D+ SGLGW++ EP + +A +VPK V
Sbjct: 323 HEFM------IKEGKTDIVFSGLGWVTANEPGAK-----------------VAAYVPKGV 359
Query: 518 EVFVRNPM 525
V +R +
Sbjct: 360 HVMLRKSL 367
>gi|116333668|ref|YP_795195.1| GTP-binding protein YqeH [Lactobacillus brevis ATCC 367]
gi|116099015|gb|ABJ64164.1| Predicted GTPase [Lactobacillus brevis ATCC 367]
Length = 380
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 121/387 (31%), Positives = 190/387 (49%), Gaps = 48/387 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT++ APGY + K + + V C RC L H + I VG
Sbjct: 18 CIGCGATIQTTDPTAPGYTPQSALD---KGIEKQEVYCQRCFRLRHYNEIVPVG------ 68
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ L+ ++ ALIV +VDI DFNGS + + G NPI+LV K DL
Sbjct: 69 -----LTDDDFLNLLTQIQDANALIVYVVDIFDFNGSVIPGLHRFVGDNPILLVGNKEDL 123
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LP+ + + DW+ + + L + V L S+K+ + G+ I K + RDVY++G
Sbjct: 124 LPRSLRRSKLRDWLRQRANEAGLRPIDVTLLSAKTNQSVDGLLQLIDKYRGDRDVYVVGV 183
Query: 281 ANVGKSAFINALLKK-MGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS IN ++++ G +D S PGTTL I++ L DTP
Sbjct: 184 TNVGKSTLINQIIRQNTGVKDLITT---------SKFPGTTLDKIEL-PLDDDHVLVDTP 233
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ + + A + +DL + PQ +++ +++ + + T+F GG+ R
Sbjct: 234 GIIQNQQMAHFLTGKDLKIVTPQKQVKPKNYQLNDQQ--------------TLFLGGVAR 279
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D K P++ T Y +L ++ + AD+FY ++LG LTPP K D
Sbjct: 280 FDFNKG-PKSGFTAYFENNLYIHRTKLENADDFYARQLGQLLTPPQAVDKD------DFP 332
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
L+ +F+ T + SD+ GLGWI+V
Sbjct: 333 PLVAHEFKTTAK--SDLVFEGLGWITV 357
>gi|199597217|ref|ZP_03210649.1| Predicted GTPase [Lactobacillus rhamnosus HN001]
gi|258508733|ref|YP_003171484.1| GTP-binding protein YqeH [Lactobacillus rhamnosus GG]
gi|385828394|ref|YP_005866166.1| GTP-binding protein [Lactobacillus rhamnosus GG]
gi|199592021|gb|EDZ00096.1| Predicted GTPase [Lactobacillus rhamnosus HN001]
gi|257148660|emb|CAR87633.1| GTP-binding protein [Lactobacillus rhamnosus GG]
gi|259650039|dbj|BAI42201.1| GTP-binding protein [Lactobacillus rhamnosus GG]
Length = 374
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 124/387 (32%), Positives = 186/387 (48%), Gaps = 48/387 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA LQT++ PGY+ T K + C RC L H + I V
Sbjct: 12 CIGCGAILQTTDPKKPGYLPAATL---AKAEADDDIYCQRCFRLRHYNEIAPVT------ 62
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ L+ + ALIV ++DI DFNGS + + G NP+ILV K D+
Sbjct: 63 -----LTDDDFLRLLNAIGESNALIVNVIDIFDFNGSVIPGLHRFVGDNPVILVGNKADV 117
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + N + +W+ + + L ++ L S+K G+ + + I+K ++ RDVY++G
Sbjct: 118 LPKSLNPNKLKNWLQQQAKAQGLRPVTTLLASAKKGFGVDELLTAIEKYREHRDVYVVGV 177
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
N GKS IN ++K++ G D S PGTTL I I G L DTP
Sbjct: 178 TNTGKSTLINRIIKQLTGVEDLITT---------SRFPGTTLDRIMI-PLDDGQSLIDTP 227
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A V +DL ++P S ++ ++ + NE G TIF GGL R
Sbjct: 228 GIIHRHQMAHFVGPKDLKLVSPTSVIKPATYQL-------NE-------GQTIFLGGLAR 273
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D L+ ++ Y L ++ ADEFYQ+ +G L PP + R+
Sbjct: 274 FDYLRGGRQS-FVIYADTQLPLHRTKLINADEFYQRHVGGLLAPPQADEV--------RD 324
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
++FE T + SD+ +GLGWI+V
Sbjct: 325 FPPLVRFEFTPKEKSDLVFAGLGWITV 351
>gi|228993078|ref|ZP_04153001.1| hypothetical protein bpmyx0001_38150 [Bacillus pseudomycoides DSM
12442]
gi|228999128|ref|ZP_04158710.1| hypothetical protein bmyco0003_36850 [Bacillus mycoides Rock3-17]
gi|229006676|ref|ZP_04164310.1| hypothetical protein bmyco0002_35780 [Bacillus mycoides Rock1-4]
gi|228754537|gb|EEM03948.1| hypothetical protein bmyco0002_35780 [Bacillus mycoides Rock1-4]
gi|228760745|gb|EEM09709.1| hypothetical protein bmyco0003_36850 [Bacillus mycoides Rock3-17]
gi|228766726|gb|EEM15366.1| hypothetical protein bpmyx0001_38150 [Bacillus pseudomycoides DSM
12442]
Length = 368
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 128/427 (29%), Positives = 192/427 (44%), Gaps = 68/427 (15%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG +QT + GY + E ++ V+C RC L + + I V
Sbjct: 7 CIGCGVEIQTENKNGVGYAPTSSLEKEQ-------VICQRCFRLKNYNEIQDVS------ 53
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ L+ + + AL+VK+VDI DFNGS+L + G N ++LV K DL
Sbjct: 54 -----LTDDDFLRILNGIGQSDALVVKIVDIFDFNGSWLPGLHRFVGNNKVLLVGNKSDL 108
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
+PK + V W+ + + L V L S+ GI +A I++ + G+DVY++G
Sbjct: 109 IPKSVKHDKVKHWMRYSAKQLGLKPEDVFLISAAKGQGIRELAEAIEQYRGGKDVYVVGC 168
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS FIN ++K+ E + PGTTL I I LYDTPG
Sbjct: 169 TNVGKSTFINRMIKEFSEETENVITTSHF-------PGTTLDLIDI-PLDETSSLYDTPG 220
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ HH+ A V + L + P ++ F + E T+F+GGL R
Sbjct: 221 IINHHQMAHYVGKQSLKLITPTKEIKPMVFQLNEEQ--------------TLFFGGLARF 266
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D + T + L ++ +KADE Y+K G L PP ++ E GL
Sbjct: 267 DYISG-GRRAFTCHLSNRLPIHRTKLEKADELYEKHAGELLNPPT-PEELENMPGL---- 320
Query: 461 LLEIKFE-DTERPASDVAISGLGWISV-EPVRRSIRNSDINLESTSGELHLAVHVPKPVE 518
+K+E + P +DV SGLGW++V EP + + HVPK V
Sbjct: 321 ---VKYEFNIREPKTDVVFSGLGWVTVNEPGAK-----------------IVAHVPKGVS 360
Query: 519 VFVRNPM 525
V +R +
Sbjct: 361 VSLRKSL 367
>gi|226311575|ref|YP_002771469.1| GTP-binding protein YqeH [Brevibacillus brevis NBRC 100599]
gi|226094523|dbj|BAH42965.1| GTP binding protein [Brevibacillus brevis NBRC 100599]
Length = 373
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 128/424 (30%), Positives = 198/424 (46%), Gaps = 61/424 (14%)
Query: 99 ASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGG 158
SC GCG +QT+++ PGY P++ +K ++C RC + H + + VG
Sbjct: 7 GSCAGCGIAIQTADAKKPGYA-PESALGRK------VIICQRCYRIKHYNEVAPVG---- 55
Query: 159 YAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKV 218
+ D+ + L + ++L+V +VDI DF GS+L + G NPI+LV KV
Sbjct: 56 -------MGDDDFLKILDGIGSTESLVVMVVDIFDFQGSWLKGLPRFVGKNPILLVGNKV 108
Query: 219 DLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYIL 278
DLLP+ + N V +W+ ++ L V L S++ I + + I + +KGRDVYI+
Sbjct: 109 DLLPRNINLNRVRNWMQHEAKERGLRPEDVVLISAQKGLHIDELLNRIGELRKGRDVYIV 168
Query: 279 GSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDT 338
G NVGKS IN +L G A + S PGTTL I+I G ++DT
Sbjct: 169 GVTNVGKSTMINRILHDYG--------AAELEITTSPFPGTTLDKIEI-PLEDGRSIFDT 219
Query: 339 PGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLV 398
PG+ + +V DL + P SR+ + + + +G ++F GGL
Sbjct: 220 PGIINRDQIGHMVSPTDLRKITPTSRINSKVYQLD--------------DGQSLFLGGLA 265
Query: 399 RIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDR 458
RID ++ + + Y L ++ +KADE QK G L PP G++ A+ +
Sbjct: 266 RIDFVRGERQPFIV-YVDNDLYIHRTKLEKADEVMQKHHGTLLVPPTGEEAAKALPPFVK 324
Query: 459 ERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVE 518
K T +D+ ISGLGW+S++ E + VH PK V
Sbjct: 325 HTFKINKSTMT----TDIVISGLGWVSIQ---------------GKHEASVVVHAPKGVS 365
Query: 519 VFVR 522
V +R
Sbjct: 366 VGMR 369
>gi|295398703|ref|ZP_06808725.1| ribosome biogenesis GTPase YqeH [Aerococcus viridans ATCC 11563]
gi|294973056|gb|EFG48861.1| ribosome biogenesis GTPase YqeH [Aerococcus viridans ATCC 11563]
Length = 375
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 127/431 (29%), Positives = 194/431 (45%), Gaps = 65/431 (15%)
Query: 95 NSAVASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVG 154
N C GCGA +QT + D GY Y+ K + + C RC L H + + V
Sbjct: 3 NEETLYCVGCGAEIQTDQPDKRGYTPQSAYQ---KGIESGLLYCQRCFKLRHYNTLEKVS 59
Query: 155 GNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILV 214
SADE L+ L + ALIV ++DI D GS + + AG NPI++V
Sbjct: 60 -----------TSADEFLAILNTLSEKDALIVNVIDIFDVAGSLINGLNRFAGTNPILMV 108
Query: 215 VTKVDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRD 274
K+D +PK N + +W+ + + V + LTS+K A I + ++I + + GRD
Sbjct: 109 ANKMDAIPKAVKHNRIENWLRKYLKDNGVKVDDLILTSAKKRANIDDLLAKIDEMRDGRD 168
Query: 275 VYILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQI---DAFLG 331
VY++G ANVGKS+ IN +L+ G +Q PGTTL I I DA
Sbjct: 169 VYVIGMANVGKSSLINRILQATGVEADVITTSQ--------FPGTTLDLIDIPFDDAEGN 220
Query: 332 GGKLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFT 391
L DTPG+ + A++ ++L P ++ +F + E T
Sbjct: 221 EASLIDTPGIINPGQMTAILEGKELVDALPNKEIKPVTFQLNPEQ--------------T 266
Query: 392 IFWGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAE 451
+F+GGL R+D + T T Y ++ + +DEFYQ LG L PP + A
Sbjct: 267 LFFGGLARLDFIAG-ERTSFTLYMSGQIKPHRRKLAGSDEFYQAHLGGILQPPYPENVAN 325
Query: 452 GWKGLDRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAV 511
+ GL R+ E + + +D+ GLGW+SV S + +
Sbjct: 326 -FPGLVRK-------EFSIKTPTDIVFPGLGWVSV-----------------SDPVQIVA 360
Query: 512 HVPKPVEVFVR 522
+VPK +++ R
Sbjct: 361 YVPKGIDIITR 371
>gi|418008288|ref|ZP_12648155.1| GTP-binding protein [Lactobacillus casei UW4]
gi|410546966|gb|EKQ21209.1| GTP-binding protein [Lactobacillus casei UW4]
Length = 374
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 123/387 (31%), Positives = 185/387 (47%), Gaps = 48/387 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA LQT++ PGY+ T K + C RC L H + I V
Sbjct: 12 CIGCGAILQTTDPKKPGYLPKATLS---KADPDDEIYCQRCFRLRHYNEIAPVT------ 62
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ L+ + ALIV ++DI DFNGS + + G NP+ILV K D+
Sbjct: 63 -----LTDDDFLRLLNAIGESNALIVNVIDIFDFNGSIIPGLHRFVGDNPVILVGNKADV 117
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + N + +W+ + + L ++ L S+K G+ + I+K + RDVY++G
Sbjct: 118 LPKSLNPNRLKNWLQQQAKAQGLRPVATMLASAKKGFGVDELLDAIEKYRDHRDVYVVGV 177
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
N GKS IN ++K++ G D S PGTTL I I G L DTP
Sbjct: 178 TNTGKSTLINRIIKELTGVEDLITT---------SRFPGTTLDRIMI-PLDDGQSLIDTP 227
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A V +DL ++P S ++ ++ + NE G TIF GGL R
Sbjct: 228 GIIHRHQMAHFVGPKDLKLVSPTSVIKPATYQL-------NE-------GQTIFLGGLAR 273
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D L+ Y L ++ + AD+FYQK +G L+PP + + + L
Sbjct: 274 FDYLRG-GRNSFVVYTDNQLTLHRTKLENADDFYQKHVGRLLSPPQADEVPD-FPPL--- 328
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
++FE T + +D+ +GLGWI+V
Sbjct: 329 ----VRFEFTPKEKADLVFAGLGWITV 351
>gi|417006045|ref|ZP_11944615.1| GTP-binding protein YqeH [Streptococcus agalactiae FSL S3-026]
gi|341576226|gb|EGS26637.1| GTP-binding protein YqeH [Streptococcus agalactiae FSL S3-026]
Length = 372
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 122/388 (31%), Positives = 187/388 (48%), Gaps = 48/388 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT DA GY E K + + C RC L H + IT V
Sbjct: 6 CIGCGARIQTENKDAAGYTPRAALE---KGLETGELYCQRCFRLRHYNEITDV------- 55
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ DE + L + AL+V ++DI DFNGS + + N ++LV K D+
Sbjct: 56 ----HITDDEFLKLLHEVGDSDALVVNVIDIFDFNGSIIPGLSRFVSGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK V W+ E ++ L + V LTS+++ I + I+K + GRDVY++G
Sbjct: 112 LPKSVKDGKVTQWLTERAHEEGLRPVDVILTSAQNHHAIKDLIDTIEKYRHGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G RD S PGTTL I+I G ++DTP
Sbjct: 172 TNVGKSTLINAIIREITGSRDVITT---------SRFPGTTLDKIEI-PLDDGSYIFDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + A++L ++P+ ++ +++ + SE T+F GL R
Sbjct: 222 GIIHRHQMAHYLTAKNLKYVSPKKEIKPKTYQLNSEQ--------------TLFLAGLAR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + T Y +L ++ ADEFY K +G L PP K+ + D
Sbjct: 268 FDFISGQKQG-FTAYFDNNLNLHRTKLVGADEFYTKHVGKLLIPPTSKEVS------DFP 320
Query: 460 RLLEIKFEDTERPASDVAISGLGWISVE 487
+L ++ E T + D+ SGLGWI V+
Sbjct: 321 KL--VRHEFTIKDKMDIVYSGLGWIRVK 346
>gi|229117833|ref|ZP_04247197.1| hypothetical protein bcere0017_41040 [Bacillus cereus Rock1-3]
gi|423377807|ref|ZP_17355091.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG1O-2]
gi|423547638|ref|ZP_17523996.1| ribosome biogenesis GTPase YqeH [Bacillus cereus HuB5-5]
gi|423622577|ref|ZP_17598355.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VD148]
gi|228665630|gb|EEL21108.1| hypothetical protein bcere0017_41040 [Bacillus cereus Rock1-3]
gi|401179359|gb|EJQ86532.1| ribosome biogenesis GTPase YqeH [Bacillus cereus HuB5-5]
gi|401260697|gb|EJR66865.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VD148]
gi|401636073|gb|EJS53827.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG1O-2]
Length = 368
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 128/427 (29%), Positives = 191/427 (44%), Gaps = 68/427 (15%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG +QT + GY + E ++ V+C RC L H + I V
Sbjct: 7 CIGCGVEIQTENKNEVGYAPASSLEKEQ-------VICQRCFRLKHYNEIQDVS------ 53
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ L+ + R AL+VK+VDI DFNGS+L + G N ++LV KVDL
Sbjct: 54 -----LTDDDFLRILNGIGRSDALVVKIVDIFDFNGSWLPGLHRFVGNNKVLLVGNKVDL 108
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
+PK + V W+ + + L V L S+ GI +A I+ + G+DVY++G
Sbjct: 109 IPKSVKHDKVKHWMRYSAKQLGLKPEDVFLISAAKGQGIAELADAIEYYRDGKDVYVVGC 168
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS FIN ++K+ + + PGTTL I I LYDTPG
Sbjct: 169 TNVGKSTFINRMIKEFSDETENVITTSHF-------PGTTLDLIDI-PLDEESSLYDTPG 220
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ HH+ A V E L + P ++ F + E T+F+ GL R
Sbjct: 221 IINHHQMAHYVGKESLKLITPTKEIKPMVFQLNEEQ--------------TLFFSGLARF 266
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D + T + L ++ +KADE Y+ G L+PP ++ E
Sbjct: 267 DYVSG-GRRAFTCHFSNRLTIHRTKLEKADELYKNHAGDLLSPPTPEE---------LEN 316
Query: 461 LLE-IKFE-DTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVE 518
+ E +K+E + P +DV SGLGW++V + SG + HVPK V
Sbjct: 317 MPELVKYEFNIREPKTDVVFSGLGWVTV---------------NESGA-KIVAHVPKGVS 360
Query: 519 VFVRNPM 525
V +R +
Sbjct: 361 VSLRKSL 367
>gi|387760687|ref|YP_006067664.1| ribosome biogenesis GTPase YqeH [Streptococcus salivarius 57.I]
gi|339291454|gb|AEJ52801.1| ribosome biogenesis GTPase YqeH [Streptococcus salivarius 57.I]
Length = 372
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 119/388 (30%), Positives = 191/388 (49%), Gaps = 48/388 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT + + G+ + KK + + C RC L H + I V
Sbjct: 6 CIGCGAQIQTEDKEKAGFTPASSI---KKAEETGELYCQRCFRLRHYNEIVDV------- 55
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ DE + L + AL+V +VDI DFNGS + + N ++LV K D+
Sbjct: 56 ----HITDDEFLKLLHEVGDSDALVVNVVDIFDFNGSIIPGLSRFVSGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK V W+ E ++ + + V LTS+++ I + I+K +KGRDVY++G
Sbjct: 112 LPKSVKDGKVTQWLTERAHEEGMRPVDVMLTSAQNHHAIKELIQRIEKLRKGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA++K++ G++D S PGTTL I+I G ++DTP
Sbjct: 172 TNVGKSTLINAIIKEITGDKDVITT---------SRFPGTTLDKIEI-PLDDGSYIFDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + A+DL ++P+ ++ +++ + + G T+F GGL R
Sbjct: 222 GIIHRHQMAHYLSAKDLKYVSPKKEIKPKTYQLNA--------------GQTLFLGGLGR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + F+ +L+++ + AD FY K +G L PP K A D
Sbjct: 268 FDFIDGNKQGFTAFF-DNNLKLHRTKLEGADAFYDKHVGSLLMPPGPKDLA------DFP 320
Query: 460 RLLEIKFEDTERPASDVAISGLGWISVE 487
+L ++ E T + +D+ SGLGWI V+
Sbjct: 321 KL--VRHEFTVKDKTDIVFSGLGWIRVQ 346
>gi|402815729|ref|ZP_10865321.1| ribosome biogenesis GTPase YqeH [Paenibacillus alvei DSM 29]
gi|402506769|gb|EJW17292.1| ribosome biogenesis GTPase YqeH [Paenibacillus alvei DSM 29]
Length = 372
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 129/432 (29%), Positives = 194/432 (44%), Gaps = 77/432 (17%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRC-RLLSHGHMITAVGGNGGY 159
C GCGA LQ +A GYV E V+C RC R+ ++ I+
Sbjct: 10 CSGCGAELQIENPEASGYVPAKALERTP-------VICQRCFRIKNYNEAISVA------ 56
Query: 160 AGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVD 219
DE L + E AL++ +VD+ DF+GS ++ ++ G NP++LVV K+D
Sbjct: 57 ------FDQDEFLRLLGRIGEEDALVIHIVDLFDFDGSIISGLQRFVGNNPVLLVVNKID 110
Query: 220 LLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILG 279
LLPK T++N + +WV + + ++ + L S+K G + ++ + RDVY++G
Sbjct: 111 LLPKVTNWNRMINWVQRQAKEHGIRIVDIALVSAKRNLGFDRLIEQVADWRGDRDVYVVG 170
Query: 280 SANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
+ NVGKS IN L++ + D S PGTTL I I G + DTP
Sbjct: 171 ATNVGKSTLINRLIRDYSDLDGELTT--------SRYPGTTLDMIHI-PLDDGKHIIDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ R + EDL AL P L+ + + NE G T+F+G R
Sbjct: 222 GIVYKSRLTELASREDLSALLPDKSLKPAVYQL-------NE-------GQTLFFGAFAR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D ++ ++ T Y L ++ ++ADE Y+ G L PP RE
Sbjct: 268 FDFVEGERQS-FTCYLSNDLPIHRTKLERADELYRDHRGELLAPPT------------RE 314
Query: 460 RLLEI------KFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHV 513
R+ E+ +F A+DV ISGLGWI T+G L + VH
Sbjct: 315 RIDELPAWTKHQFRIGRGGATDVFISGLGWIKC--------------NGTTGAL-VEVHA 359
Query: 514 PKPVEVFVRNPM 525
PK V+V R+ +
Sbjct: 360 PKGVKVLARHSL 371
>gi|403384197|ref|ZP_10926254.1| GTPase YqeH [Kurthia sp. JC30]
Length = 368
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 123/422 (29%), Positives = 195/422 (46%), Gaps = 64/422 (15%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG +QT + APG+ E + ++C RC L + + + V
Sbjct: 7 CIGCGTQIQTEDPKAPGFAPASAVEKSDE------IICKRCFRLKNYNELQPVS------ 54
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ L+ L +K LIVK+VDI DFNGS+L + G NP++L+ KVDL
Sbjct: 55 -----LTDDDFLRILNGLGTQKGLIVKIVDIFDFNGSWLPGLHRFVGNNPVLLIANKVDL 109
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + V +W+ + L + V L S+ G+ ++I + + G DVY++G
Sbjct: 110 LPKSINPKKVINWLRHEAKQLGLKPVDVLLVSAHKGTGVQEAMAKIDEYRDGEDVYVVGC 169
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS FIN ++K+ A Q S PGTTL I+I ++DTPG
Sbjct: 170 TNVGKSTFINRIIKQ--------ATGQGDIITTSYFPGTTLDMIEI-PLDDEKAIFDTPG 220
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ HH+ A + +L + P+ ++ ++F + +E T+F G L R
Sbjct: 221 IINHHQMAHYIDPSELKYITPKKEIKPKTFQLNAEQ--------------TLFIGALARF 266
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D ++ + + T + L ++ ++ADE Y+ G L PP KQ E L R
Sbjct: 267 DFIQGM-RSNFTVHISNELNIHRTKLERADELYETHKGELLAPP-SKQFIEQLPKLVRHE 324
Query: 461 LLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVEVF 520
+ +D+ SGLGWI+V+ N D+ +A + P+ VEV
Sbjct: 325 F------SIKEGKTDIVFSGLGWITVQ-------NPDVV---------IAAYAPEGVEVM 362
Query: 521 VR 522
+R
Sbjct: 363 LR 364
>gi|229086906|ref|ZP_04219065.1| hypothetical protein bcere0022_34800 [Bacillus cereus Rock3-44]
gi|228696416|gb|EEL49242.1| hypothetical protein bcere0022_34800 [Bacillus cereus Rock3-44]
Length = 368
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 127/426 (29%), Positives = 192/426 (45%), Gaps = 66/426 (15%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG +QT + GY + E ++ V+C RC L + + I V
Sbjct: 7 CIGCGVEIQTENKNEVGYAPVSSLEKEQ-------VICQRCFRLKNYNEIQDVS------ 53
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ L+ + + AL+VK+VDI DFNGS+L + G N ++LV K DL
Sbjct: 54 -----LTDDDFLRILNGIGQSDALVVKIVDIFDFNGSWLPGLHRFVGNNKVLLVGNKSDL 108
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
+PK + V W+ + + L + L S+ GI +A I++ + G+DVY++G
Sbjct: 109 IPKSVKHDKVKHWMRYSAKQLGLKPEGIFLISAAKGQGIRELAEAIEQYRDGKDVYVVGC 168
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS FIN ++K+ E + PGTTL I I LYDTPG
Sbjct: 169 TNVGKSTFINRMIKEFSEETENVITTSHF-------PGTTLDLIDI-PLDEKSSLYDTPG 220
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ HH+ A V + L + P ++ F + E T+F+GGL R
Sbjct: 221 IINHHQMAHYVGKQSLKLITPTKEIKPMVFQLNEEQ--------------TLFFGGLARF 266
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D + T + L ++ +KADE Y+K G L PP ++ E GL
Sbjct: 267 DYISG-GRRAFTCHFSNRLPIHRTKLEKADELYEKHAGELLNPPT-PEEIENMPGL---- 320
Query: 461 LLEIKFE-DTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVEV 519
+K+E + P +DV SGLGW++V + SG + HVPK V V
Sbjct: 321 ---VKYEFNIREPKTDVVFSGLGWVTV---------------NESGA-KIVAHVPKGVSV 361
Query: 520 FVRNPM 525
+R +
Sbjct: 362 SLRKSL 367
>gi|423483918|ref|ZP_17460608.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG6X1-2]
gi|401141469|gb|EJQ49024.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG6X1-2]
Length = 368
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 126/427 (29%), Positives = 193/427 (45%), Gaps = 68/427 (15%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG +QT + GY + E ++ V+C RC L H + I V
Sbjct: 7 CIGCGVEIQTENKNEVGYAPASSLEKEQ-------VICQRCFRLKHYNEIQDVS------ 53
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ L+ + + AL+VK+VDI DFNGS+L + G N ++LV K DL
Sbjct: 54 -----LTDDDFLRILNGIGQSDALVVKIVDIFDFNGSWLPGLHRFVGNNKVLLVGNKADL 108
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
+PK + V W+ + + L V L S+ GI +A I+ ++G+DVY++G
Sbjct: 109 IPKSVKHDKVKHWMRYSAKQLGLKPEDVFLISAAKGQGITELADAIEYYREGKDVYVVGC 168
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS FIN ++K+ + + PGTTL I I LYDTPG
Sbjct: 169 TNVGKSTFINRMIKEFSDETENVITTSHF-------PGTTLDLIDI-PLDETSSLYDTPG 220
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ HH+ A V + L + P + ++ F + E T+F+GGL R
Sbjct: 221 IINHHQMAHYVGKQSLKLITPTTEVKPMVFQLNEEQ--------------TLFFGGLARF 266
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D + T + L ++ +KADE Y++ G L PP ++ E
Sbjct: 267 DYVSG-GRRAFTCHFSNRLTIHRTKLEKADELYERHAGELLNPPTPEE---------LEN 316
Query: 461 LLE-IKFE-DTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVE 518
+ E +K+E + P +DV SGLGW++V + SG + HVPK V
Sbjct: 317 MPEFVKYEFNIREPKTDVVFSGLGWVTV---------------NESGA-KIVAHVPKGVS 360
Query: 519 VFVRNPM 525
V +R +
Sbjct: 361 VSLRKSL 367
>gi|422849255|ref|ZP_16895931.1| GTP-binding protein [Streptococcus sanguinis SK115]
gi|422877039|ref|ZP_16923509.1| GTP-binding protein [Streptococcus sanguinis SK1056]
gi|325690276|gb|EGD32280.1| GTP-binding protein [Streptococcus sanguinis SK115]
gi|332360512|gb|EGJ38322.1| GTP-binding protein [Streptococcus sanguinis SK1056]
Length = 368
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 125/392 (31%), Positives = 191/392 (48%), Gaps = 49/392 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT + GY E K + + C RC L H + I+ V
Sbjct: 6 CIGCGATIQTEDKSKLGYTPQSALE---KGLETGELYCQRCFRLRHYNEISDV------- 55
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
Q D LR L + AL+V +VDI DFNGS + + N ++LV K D+
Sbjct: 56 ---QLTDDDFLR-LLHEVGDSDALVVNVVDIFDFNGSVIPGLPRFVAGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + V W+ E ++ L + V LTS+++ I + +I+ +KGRDVY++G
Sbjct: 112 LPKSVKDSKVTRWLTERAHEEGLRPVDVVLTSAQNKQAIKDLIDKIEHCRKGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G++D S PGTTL I+I G +YDTP
Sbjct: 172 TNVGKSTLINAIIQEITGDKDIITT---------SRFPGTTLDKIEI-PLADGSHIYDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + A++L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLSAKNLKYISPKKEIKPKTYQLNPEQ--------------TLFLGGLGR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + T Y L+++ A +FY K +G L PP+GK+K E + L
Sbjct: 268 FDFV-AGDKQGFTAYFDNELKLHRTKLQGASDFYDKHVGSLLVPPVGKEKEE-FPAL--- 322
Query: 460 RLLEIKFEDTERPASDVAISGLGWISVE-PVR 490
+K E T + +D+ SGLGWI V P R
Sbjct: 323 ----VKHEFTIKDKTDIVFSGLGWIRVSGPAR 350
>gi|163942091|ref|YP_001646975.1| GTP-binding protein YqeH [Bacillus weihenstephanensis KBAB4]
gi|229013556|ref|ZP_04170689.1| hypothetical protein bmyco0001_39650 [Bacillus mycoides DSM 2048]
gi|229062034|ref|ZP_04199359.1| hypothetical protein bcere0026_41060 [Bacillus cereus AH603]
gi|229135161|ref|ZP_04263961.1| hypothetical protein bcere0014_40630 [Bacillus cereus BDRD-ST196]
gi|229169083|ref|ZP_04296798.1| hypothetical protein bcere0007_40350 [Bacillus cereus AH621]
gi|423368386|ref|ZP_17345818.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VD142]
gi|423489519|ref|ZP_17466201.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BtB2-4]
gi|423495242|ref|ZP_17471886.1| ribosome biogenesis GTPase YqeH [Bacillus cereus CER057]
gi|423497964|ref|ZP_17474581.1| ribosome biogenesis GTPase YqeH [Bacillus cereus CER074]
gi|423512449|ref|ZP_17488980.1| ribosome biogenesis GTPase YqeH [Bacillus cereus HuA2-1]
gi|423519035|ref|ZP_17495516.1| ribosome biogenesis GTPase YqeH [Bacillus cereus HuA2-4]
gi|423591669|ref|ZP_17567700.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VD048]
gi|423660820|ref|ZP_17635989.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VDM022]
gi|423669921|ref|ZP_17644950.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VDM034]
gi|423673875|ref|ZP_17648814.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VDM062]
gi|163864288|gb|ABY45347.1| Nitric-oxide synthase [Bacillus weihenstephanensis KBAB4]
gi|228614311|gb|EEK71421.1| hypothetical protein bcere0007_40350 [Bacillus cereus AH621]
gi|228648289|gb|EEL04324.1| hypothetical protein bcere0014_40630 [Bacillus cereus BDRD-ST196]
gi|228717186|gb|EEL68861.1| hypothetical protein bcere0026_41060 [Bacillus cereus AH603]
gi|228747716|gb|EEL97586.1| hypothetical protein bmyco0001_39650 [Bacillus mycoides DSM 2048]
gi|401080713|gb|EJP88997.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VD142]
gi|401151335|gb|EJQ58787.1| ribosome biogenesis GTPase YqeH [Bacillus cereus CER057]
gi|401160090|gb|EJQ67469.1| ribosome biogenesis GTPase YqeH [Bacillus cereus HuA2-4]
gi|401161251|gb|EJQ68618.1| ribosome biogenesis GTPase YqeH [Bacillus cereus CER074]
gi|401231802|gb|EJR38304.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VD048]
gi|401299048|gb|EJS04648.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VDM034]
gi|401300861|gb|EJS06450.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VDM022]
gi|401310241|gb|EJS15566.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VDM062]
gi|402431755|gb|EJV63819.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BtB2-4]
gi|402449420|gb|EJV81257.1| ribosome biogenesis GTPase YqeH [Bacillus cereus HuA2-1]
Length = 368
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 124/425 (29%), Positives = 192/425 (45%), Gaps = 64/425 (15%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG +QT + GY + E ++ V+C RC L H + I V
Sbjct: 7 CIGCGVEIQTENKNEVGYAPVSSLEKEQ-------VICQRCFRLKHYNEIQDVS------ 53
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ L+ + + AL+VK+VDI DFNGS+L + G N ++LV K DL
Sbjct: 54 -----LTDDDFLRILNGIGQSDALVVKIVDIFDFNGSWLPGLHRFVGNNKVLLVGNKADL 108
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
+PK + V W+ + + L V L S+ GI +A I+ ++G+DVY++G
Sbjct: 109 IPKSVKHDKVKHWMRYSAKQLGLKPEDVFLISAAKGQGIAELADAIEHYREGKDVYVVGC 168
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS FIN ++K+ + + PGTTL I I LYDTPG
Sbjct: 169 TNVGKSTFINRMIKEFSDETENVITTSHF-------PGTTLDLIDI-PLDETSSLYDTPG 220
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ HH+ A V + L + P + ++ F + E T+F+GGL R
Sbjct: 221 IINHHQMAHYVGKQSLKLITPTTEVKPMVFQLNEEQ--------------TLFFGGLARF 266
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D + T + L ++ +KADE Y+K G L PP ++ + +
Sbjct: 267 DYVSG-GRRAFTCHFSNRLTIHRTKLEKADELYEKHAGELLNPPTPEELE------NMPK 319
Query: 461 LLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVEVF 520
++ +F + P +DV SGLGW++V + SG + HVPK V V
Sbjct: 320 FVKYEF-NIREPKTDVVFSGLGWVTV---------------NESGA-KIVAHVPKGVSVS 362
Query: 521 VRNPM 525
+R +
Sbjct: 363 LRKSL 367
>gi|228475982|ref|ZP_04060690.1| ribosome biogenesis GTPase YqeH [Staphylococcus hominis SK119]
gi|314936283|ref|ZP_07843630.1| ribosome biogenesis GTPase YqeH [Staphylococcus hominis subsp.
hominis C80]
gi|418619924|ref|ZP_13182735.1| ribosome biogenesis GTPase YqeH [Staphylococcus hominis VCU122]
gi|228269805|gb|EEK11285.1| ribosome biogenesis GTPase YqeH [Staphylococcus hominis SK119]
gi|313654902|gb|EFS18647.1| ribosome biogenesis GTPase YqeH [Staphylococcus hominis subsp.
hominis C80]
gi|374823487|gb|EHR87482.1| ribosome biogenesis GTPase YqeH [Staphylococcus hominis VCU122]
Length = 366
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 128/433 (29%), Positives = 208/433 (48%), Gaps = 82/433 (18%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKT-VLCGRCRLLSHGHMITAVGGNGGY 159
C GCGAPLQ+ + +APGYV +H+ F+ V+C RC L + + I VG
Sbjct: 7 CIGCGAPLQSEDKNAPGYV--------PEHNLFRDDVICQRCFRLKNYNEIQDVG----- 53
Query: 160 AGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVD 219
+ +++ L+ L + +IV ++D+ DF GSF+ ++ + G IIL K+D
Sbjct: 54 ------MDSEDFLNLLNGLSDRQGIIVNVIDVFDFEGSFINALKRIVGNKKIILAANKLD 107
Query: 220 LLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILG 279
LLP+ + V +W+ K L V L S+ GI + I + + +DVYI+G
Sbjct: 108 LLPRQINQRRVKEWLKRTARKYGLEAEEVVLISAHKGWGIDALLESINRFRNHQDVYIVG 167
Query: 280 SANVGKSAFINALLKK-MGERDPAAAMAQKYRPIQSAVPGTTLGPIQI----DAFLGGGK 334
+ NVGKS IN L+++ +GE+D S PGTTL I I + F
Sbjct: 168 TTNVGKSTLINKLIEQSVGEKDVVTT---------SRFPGTTLDMIDIPLDENTF----- 213
Query: 335 LYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFW 394
+YDTPG+ H+ V ++L + P++ ++ + F + NE G T+F+
Sbjct: 214 MYDTPGIIQAHQMTHYVTEKELKVIIPRNEIKQRVFQL-------NE-------GQTLFF 259
Query: 395 GGLVRIDLLK--VLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEG 452
GGL RID + P C Y L ++ T+KA++ ++ ++G L+PP +K
Sbjct: 260 GGLARIDYVSGGKRPLVC---YFSNDLNIHRTKTEKANDLWRNQIGHLLSPPSNPEK--- 313
Query: 453 WKGLDRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVH 512
+ + ++ E T + D+ ISGLG+I++E + I V
Sbjct: 314 ---FNISDMKAVRLE-TGKEKRDIMISGLGFITLEAGAKVI-----------------VR 352
Query: 513 VPKPVEVFVRNPM 525
VPK V+V +R +
Sbjct: 353 VPKSVDVVLRQSI 365
>gi|423612546|ref|ZP_17588407.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VD107]
gi|401246135|gb|EJR52487.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VD107]
Length = 368
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 126/427 (29%), Positives = 192/427 (44%), Gaps = 68/427 (15%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG +QT + GY + E ++ V+C RC L H + I V
Sbjct: 7 CIGCGVEIQTENKNEVGYAPASSLEKEQ-------VICQRCFRLKHYNEIQDVS------ 53
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ L+ + + AL+VK+VDI DFNGS+L + G N ++LV K DL
Sbjct: 54 -----LTDDDFLRILNGIGQSDALVVKIVDIFDFNGSWLPGLHRFVGNNKVLLVGNKADL 108
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
+PK + V W+ + + L V L S+ GI +A I+ + G+DVY++G
Sbjct: 109 IPKSVKHDKVKHWMRYSAKQLGLKPEDVFLISAAKGQGIAELAEAIEYYRGGKDVYVVGC 168
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS FIN ++K+ + + PGTTL I I LYDTPG
Sbjct: 169 TNVGKSTFINRMIKEFSDETENVITTSHF-------PGTTLDLIDI-PLDEASSLYDTPG 220
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ HH+ A V + L + P + ++ F + E T+F+GGL R
Sbjct: 221 IINHHQMAHYVGKQSLKLITPTTEIKPMVFQLNEEQ--------------TLFFGGLARF 266
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D + T + L ++ +KADE Y++ G L PP ++ E
Sbjct: 267 DYVSG-GRRAFTCHFSNRLTIHRTKLEKADELYERHAGELLNPPTPEE---------LEN 316
Query: 461 LLE-IKFE-DTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVE 518
+ E +K+E + P +DV SGLGW++V + SG + HVPK V
Sbjct: 317 MPEFVKYEFNIREPKTDVVFSGLGWVTV---------------NESGA-KIVAHVPKGVS 360
Query: 519 VFVRNPM 525
V +R +
Sbjct: 361 VSLRKSL 367
>gi|227877772|ref|ZP_03995805.1| GTP-binding protein [Lactobacillus crispatus JV-V01]
gi|256843623|ref|ZP_05549111.1| ribosome biogenesis GTPase YqeH [Lactobacillus crispatus 125-2-CHN]
gi|256850099|ref|ZP_05555529.1| GTP-binding protein YqeH [Lactobacillus crispatus MV-1A-US]
gi|262047387|ref|ZP_06020344.1| ribosome biogenesis GTPase YqeH [Lactobacillus crispatus MV-3A-US]
gi|293380732|ref|ZP_06626780.1| ribosome biogenesis GTPase YqeH [Lactobacillus crispatus 214-1]
gi|423319186|ref|ZP_17297062.1| ribosome biogenesis GTPase YqeH [Lactobacillus crispatus FB049-03]
gi|423320732|ref|ZP_17298604.1| ribosome biogenesis GTPase YqeH [Lactobacillus crispatus FB077-07]
gi|227862631|gb|EEJ70117.1| GTP-binding protein [Lactobacillus crispatus JV-V01]
gi|256615043|gb|EEU20244.1| ribosome biogenesis GTPase YqeH [Lactobacillus crispatus 125-2-CHN]
gi|256713071|gb|EEU28062.1| GTP-binding protein YqeH [Lactobacillus crispatus MV-1A-US]
gi|260572361|gb|EEX28924.1| ribosome biogenesis GTPase YqeH [Lactobacillus crispatus MV-3A-US]
gi|290922696|gb|EFD99650.1| ribosome biogenesis GTPase YqeH [Lactobacillus crispatus 214-1]
gi|405589995|gb|EKB63534.1| ribosome biogenesis GTPase YqeH [Lactobacillus crispatus FB049-03]
gi|405600001|gb|EKB73174.1| ribosome biogenesis GTPase YqeH [Lactobacillus crispatus FB077-07]
Length = 369
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 123/387 (31%), Positives = 189/387 (48%), Gaps = 48/387 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA LQ+ + + GY+ P + K K + V C RC L H + I V N
Sbjct: 7 CIGCGAKLQSDDPEKAGYL-PKSALDKAKQEENADVYCQRCFRLRHYNEIMPVDLNN--- 62
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
D+ L+ L ++KALIV +VD+ DF+ S L+ ++ G N ILV K DL
Sbjct: 63 --------DDFLALLNSLGQKKALIVNVVDLFDFSNSLLSSLKRFVGNNDFILVGNKFDL 114
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
PK + + + DW+ + + L + L S+K + + + I K+ + +DVY +G+
Sbjct: 115 FPKNSKQSKIKDWMRQEANRMGLYPKEIFLVSAKKKLNLEDLIAYINKQSQDKDVYFVGT 174
Query: 281 ANVGKSAFINALLKKMGE-RDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA++ MG+ +D A S PGTTL I+I G L DTP
Sbjct: 175 TNVGKSTLINAIIDMMGDIQDLITA---------SRFPGTTLDKIEI-PLENGHFLIDTP 224
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ ++ A ++A+DL ++P+ L+ ++ + L G T+F GL R
Sbjct: 225 GIMTENQLATHLNAKDLELVSPKKPLKPATYQL--------------LPGNTLFLAGLGR 270
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
ID LK T T Y + + ++ T AD+FY+K G L+PP + KG +E
Sbjct: 271 IDYLKG-ESTSFTVYVARGMYIHRTKTANADDFYKKHKGELLSPPAADDEMAPLKG--QE 327
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
E K SD+ G+G+++V
Sbjct: 328 FRTEYK--------SDLLFGGIGFVTV 346
>gi|312866371|ref|ZP_07726589.1| ribosome biogenesis GTPase YqeH [Streptococcus downei F0415]
gi|311098065|gb|EFQ56291.1| ribosome biogenesis GTPase YqeH [Streptococcus downei F0415]
Length = 368
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 125/425 (29%), Positives = 199/425 (46%), Gaps = 63/425 (14%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +Q+ + +APGY + E K + + C RC L H + I V
Sbjct: 6 CIGCGAKIQSRDKEAPGYTPQSSIE---KSQETGELYCQRCFRLRHYNEIVDVA------ 56
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ + L + +AL+V +VDI DFNGS + + N ++LV K D+
Sbjct: 57 -----ITDDDFLKLLHEVGDSQALVVNVVDIFDFNGSVIPGLSRFVAGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK V W+ E ++ L + V LTS+++ I + + I++ + GRDVY++G
Sbjct: 112 LPKSVKDGKVTQWLTERAHEEGLRPVDVLLTSAQNGQAIKELIARIEELRAGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS INA++K++ + S PGTTL I+I G ++DTPG
Sbjct: 172 TNVGKSTLINAIIKEI--------TGNQEIITTSRFPGTTLDKIEI-PLDDGSYIFDTPG 222
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ H+ A + A+DL ++P+ ++ +++ + T+F GGL R
Sbjct: 223 IIHRHQMAHYLSAKDLKYVSPKKEIKPKTYQLNPSQ--------------TLFLGGLGRF 268
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D L+ + T Y +L+++ + AD+FY K G LTPP K+ A K
Sbjct: 269 DFLQG-DKQGFTAYFDNNLKLHRTKLEGADDFYLKHAGSLLTPPSAKEVANFPK------ 321
Query: 461 LLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVEVF 520
++ E T +DV SGLGW+ V +G +A P+ V V
Sbjct: 322 --LVRHEFTIMGKTDVVFSGLGWVRV-----------------NGSARVAAWAPEGVGVM 362
Query: 521 VRNPM 525
VR +
Sbjct: 363 VRKAI 367
>gi|421453058|ref|ZP_15902414.1| GTP-binding protein [Streptococcus salivarius K12]
gi|400181367|gb|EJO15634.1| GTP-binding protein [Streptococcus salivarius K12]
Length = 372
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 118/388 (30%), Positives = 192/388 (49%), Gaps = 48/388 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT + + G+ + KK + + C RC L H + I V
Sbjct: 6 CIGCGAQIQTEDKEKAGFTPASSI---KKAEETGELYCQRCFRLRHYNEIVDV------- 55
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ DE + L + AL+V +VDI DFNGS + + N ++LV K D+
Sbjct: 56 ----HITDDEFLKLLHEVGDSDALVVNVVDIFDFNGSIIPGLSRFVSGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK V W+ E ++ + + V LTS+++ I + I+K +KGRDVY++G
Sbjct: 112 LPKSVKDGKVTQWLTERAHEEGMRPVDVMLTSAQNHHAIKELIQRIEKLRKGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA++K++ G++D S PGTTL I+I G ++DTP
Sbjct: 172 TNVGKSTLINAIIKEITGDKDVITT---------SRFPGTTLDKIEI-PLDDGSYIFDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + A+DL ++P+ ++ +++ + + G ++F GGL R
Sbjct: 222 GIIHRHQMAHYLSAKDLKYVSPKKEIKPKTYQLNA--------------GQSLFLGGLGR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + F+ +L+++ + AD FY K +G L PP K+ A D
Sbjct: 268 FDFIDGNKQGFTAFF-DNNLKLHRTKLEGADAFYDKHVGSLLMPPGPKELA------DFP 320
Query: 460 RLLEIKFEDTERPASDVAISGLGWISVE 487
+L+ +F T + +D+ SGLGWI V+
Sbjct: 321 KLVRHEF--TVKDKTDIVFSGLGWIRVQ 346
>gi|421768868|ref|ZP_16205578.1| GTP-binding protein YqeH, required for biogenesis of 30S ribosome
subunit [Lactobacillus rhamnosus LRHMDP2]
gi|421770979|ref|ZP_16207640.1| GTP-binding protein YqeH, required for biogenesis of 30S ribosome
subunit [Lactobacillus rhamnosus LRHMDP3]
gi|411185717|gb|EKS52844.1| GTP-binding protein YqeH, required for biogenesis of 30S ribosome
subunit [Lactobacillus rhamnosus LRHMDP2]
gi|411186414|gb|EKS53538.1| GTP-binding protein YqeH, required for biogenesis of 30S ribosome
subunit [Lactobacillus rhamnosus LRHMDP3]
Length = 374
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 124/387 (32%), Positives = 186/387 (48%), Gaps = 48/387 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA LQT++ PGY+ T K + C RC L H + I V
Sbjct: 12 CIGCGAILQTTDPKKPGYLPAATLA---KAEADDDIYCQRCFRLRHYNEIAPVT------ 62
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ L+ + ALIV ++DI DFNGS + + G NP+ILV K D+
Sbjct: 63 -----LTDDDFLRLLNAIGESNALIVNVIDIFDFNGSVIPGLHRFVGDNPVILVGNKADV 117
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + N + +W+ + + L ++ L S+K G+ + + I+K ++ RDVY++G
Sbjct: 118 LPKSLNPNKLKNWLQQQAKAQGLRPVTTLLASAKKGFGVDELLTAIEKYREHRDVYVVGV 177
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
N GKS IN ++K++ G D S PGTTL I I G L DTP
Sbjct: 178 TNTGKSTLINRIIKQLIGVEDLITT---------SRFPGTTLDRIMI-PLDDGQSLIDTP 227
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A V +DL ++P S ++ ++ + NE G TIF GGL R
Sbjct: 228 GIIHRHQMAHFVGPKDLKLVSPTSVIKPATYQL-------NE-------GQTIFLGGLAR 273
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D L+ ++ Y L ++ AD+FYQK +G L PP + R+
Sbjct: 274 FDYLRGGRQS-FVIYADTQLPLHRTKLINADDFYQKHVGGLLAPPQADEV--------RD 324
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
++FE T + SD+ +GLGWI+V
Sbjct: 325 FPPLVRFEFTPKEKSDLVFAGLGWITV 351
>gi|423452361|ref|ZP_17429214.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG5X1-1]
gi|423470557|ref|ZP_17447301.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG6O-2]
gi|401139999|gb|EJQ47556.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG5X1-1]
gi|402436223|gb|EJV68255.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG6O-2]
Length = 368
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 126/427 (29%), Positives = 193/427 (45%), Gaps = 68/427 (15%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG +QT + GY + E ++ V+C RC L H + I V
Sbjct: 7 CIGCGVEIQTENKNEVGYAPVSSLEKEQ-------VICQRCFRLKHYNEIQDVS------ 53
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ L+ + + AL+VK+VDI DFNGS+L + G N ++LV K DL
Sbjct: 54 -----LTDDDFLRILNGIGQSDALVVKIVDIFDFNGSWLPGLHRFVGNNKVLLVGNKADL 108
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
+PK + V W+ + + L V L S+ GI +A I+ ++G+DVY++G
Sbjct: 109 IPKSVKHDKVKHWMRYSAKQLGLKPEDVFLISAAKGQGITELADAIEHYREGKDVYVVGC 168
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS FIN ++K+ + + PGTTL I I LYDTPG
Sbjct: 169 TNVGKSTFINRMIKEFSDETENVITTSHF-------PGTTLDLIDI-PLDETSSLYDTPG 220
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ HH+ A V + L + P + ++ F + E T+F+GGL R
Sbjct: 221 IINHHQMAHYVGKQSLKLITPTTEVKPMVFQLNEEQ--------------TLFFGGLARF 266
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D + T + L ++ +KADE Y++ G L PP ++ E
Sbjct: 267 DYVSG-GRRAFTCHFSNRLTIHRTKLEKADELYERHAGELLNPPTPEE---------LEN 316
Query: 461 LLE-IKFE-DTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVE 518
+ E +K+E + P +DV SGLGW++V + SG + HVPK V
Sbjct: 317 MPEFVKYEFNIREPKTDVVFSGLGWVTV---------------NESGA-KIVAHVPKGVS 360
Query: 519 VFVRNPM 525
V +R +
Sbjct: 361 VSLRKSL 367
>gi|309798779|ref|ZP_07693043.1| GTP-binding protein [Streptococcus infantis SK1302]
gi|308117596|gb|EFO55008.1| GTP-binding protein [Streptococcus infantis SK1302]
Length = 368
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 127/426 (29%), Positives = 205/426 (48%), Gaps = 65/426 (15%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT++ G+ E K + V C RC L H + IT V
Sbjct: 6 CIGCGATIQTTDKTGLGFTPQSALE---KGLETGEVYCQRCFRLRHYNEITDVQ------ 56
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ + L + AL+V ++DI DFNGS + + N ++LV K D+
Sbjct: 57 -----LTDDDFLKLLHEVGDSDALVVNVIDIFDFNGSVIPGLPRFVSGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W++E ++ L + V LTS+++ I V +I+ +KGRDVY++G
Sbjct: 112 LPKSVKAGKISQWLMERAHEEGLRPVDVILTSAQNKHAIKEVIDKIEHYRKGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G+++ S PGTTL I+I G +YDTP
Sbjct: 172 TNVGKSTLINAIIQEITGDQNVITT---------SRFPGTTLDKIEI-PLDDGSYIYDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + A++L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLTAKNLKYVSPKKEIKPKTYQLNPEQ--------------TLFLGGLGR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + + F+ L+++ + A +FY K LG LTPP K+K D
Sbjct: 268 FDFIAGEKQGFIAFF-DNELKLHRTKLEGASDFYDKHLGTLLTPPNTKEKE------DFP 320
Query: 460 RLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVEV 519
+L++ F T + +D+ ISGLGWI V +G +AV P+ V V
Sbjct: 321 KLVQHVF--TIKEKTDLVISGLGWIRV-----------------AGTAKVAVWAPEGVAV 361
Query: 520 FVRNPM 525
VR +
Sbjct: 362 VVRKAI 367
>gi|424788334|ref|ZP_18215089.1| ribosome biogenesis GTPase YqeH [Streptococcus intermedius BA1]
gi|422112837|gb|EKU16599.1| ribosome biogenesis GTPase YqeH [Streptococcus intermedius BA1]
Length = 368
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 125/387 (32%), Positives = 185/387 (47%), Gaps = 48/387 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGAP+QT D GY E K + + C RC L H + IT V
Sbjct: 6 CIGCGAPIQTKHKDKMGYTPQSALE---KGLETGELYCQRCFRLRHYNEITDV------- 55
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
Q D LR L + AL+V +VDI DFNGS + + N ++LV K D+
Sbjct: 56 ---QLTDDDFLR-LLHEVGDSNALVVNVVDIFDFNGSIIPGLPRFVAGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK N V W+ E ++ L + V LTS+++ I + +I++ +KGRDVY++G
Sbjct: 112 LPKSVKSNKVTQWLTERAHEEGLRPIDVVLTSAQNKQAIKELMEKIEQYRKGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G++D S PGTTL I+I G +YDTP
Sbjct: 172 TNVGKSTLINAIIQEITGDKDIITT---------SRFPGTTLDKIEI-PLADGSHIYDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ ++ A + A+ L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRYQMAHYLSAKHLKYVSPKKEIKPKTYQLNPEQ--------------TLFLGGLGR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + T Y L+++ A EFY K +G LTPP ++ K + E
Sbjct: 268 FDFVSG-DKQGFTAYFDNELKLHRTKLAGAGEFYNKHVGSLLTPPSKQELPTFPKLVKHE 326
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
+E K DV SGLGWI V
Sbjct: 327 LKIETKI--------DVVFSGLGWIRV 345
>gi|418011123|ref|ZP_12650889.1| GTP-binding protein YqeH [Lactobacillus casei Lc-10]
gi|410552760|gb|EKQ26774.1| GTP-binding protein YqeH [Lactobacillus casei Lc-10]
Length = 374
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 123/387 (31%), Positives = 185/387 (47%), Gaps = 48/387 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA LQT++ PGY+ T K + C RC L H + I V
Sbjct: 12 CIGCGAILQTTDPKKPGYLPKATLS---KADPDDEIYCQRCFRLRHYNEIAPVT------ 62
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ L+ + ALIV ++DI DFNGS + + G NP+ILV K D+
Sbjct: 63 -----LTDDDFLRLLNAIGESNALIVNVIDIFDFNGSVIPGLHRFVGDNPVILVGNKADV 117
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + N + +W+ + + L ++ L S+K G+ + I+K + RDVY++G
Sbjct: 118 LPKSLNPNRLKNWLQQQAKAQGLRPVATMLASAKKGFGVDELLDAIEKYRDHRDVYVVGV 177
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
N GKS IN ++K++ G D S PGTTL I I G L DTP
Sbjct: 178 TNTGKSTLINRIIKELTGVEDLITT---------SRFPGTTLDRIMI-PLDDGQSLIDTP 227
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A V +DL ++P S ++ ++ + NE G TIF GGL R
Sbjct: 228 GIIHRHQMAHFVGPKDLKLVSPTSVIKPATYQL-------NE-------GQTIFLGGLAR 273
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D L+ Y L ++ + AD+FYQK +G L+PP + + + L
Sbjct: 274 FDYLRG-GRNSFVIYTDNQLTLHRTKLENADDFYQKHVGGLLSPPQADEVPD-FPPL--- 328
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
++FE T + +D+ +GLGWI+V
Sbjct: 329 ----VRFEFTPKEKADLVFAGLGWITV 351
>gi|456370287|gb|EMF49183.1| GTP-binding protein [Streptococcus parauberis KRS-02109]
Length = 372
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 124/396 (31%), Positives = 190/396 (47%), Gaps = 53/396 (13%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG +QT + GY KK + + C RC L H + IT V
Sbjct: 6 CIGCGINIQTENKEQAGYTPTGAL---KKGLETGELYCQRCFRLRHYNEITDVN------ 56
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
+S +E + L + AL++ ++DI DFNGS + + N ++LV K D+
Sbjct: 57 -----ISDEEFLKLLHEVGDSDALVINVIDIFDFNGSVIPGLSRFVSGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK V W+ E ++ L L V LTS+++ I + +I + +KGRDVY++G
Sbjct: 112 LPKSVKEGKVTQWLTERAHEEGLRPLDVILTSAQNNNAIKELIEKINQLRKGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G++D S PGTTL I+I G ++DTP
Sbjct: 172 TNVGKSTLINAIIQEITGDKDIITT---------SRFPGTTLDKIEI-PLDDGTFIFDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + A+DL ++P+ ++ +++ + SE T+F GGL R
Sbjct: 222 GIIHRHQMAHFLTAKDLKYISPKKEIKPKTYQLNSEQ--------------TLFLGGLGR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + T Y +L V+ + A EFYQK LG+ LTPP G E + L
Sbjct: 268 FDFISG-DKQGFTAYFDNNLTVHRTKLEGASEFYQKHLGLLLTPP-GPADKEDFPKL--- 322
Query: 460 RLLEIKFEDTERPASDVAISGLGWISVE-----PVR 490
+ E T +D+ SGLGW+ + PVR
Sbjct: 323 ----VPHEFTISDKTDLVFSGLGWLRINGSKDAPVR 354
>gi|422846086|ref|ZP_16892769.1| GTP-binding protein [Streptococcus sanguinis SK72]
gi|325688137|gb|EGD30156.1| GTP-binding protein [Streptococcus sanguinis SK72]
Length = 368
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 125/392 (31%), Positives = 192/392 (48%), Gaps = 49/392 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT + GY E K + + C RC L H + I+ V
Sbjct: 6 CIGCGATIQTEDKVKLGYTPQSALE---KGLEAGELYCQRCFRLRHYNEISDV------- 55
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
Q D LR L + AL+V +VDI DFNGS + + N ++LV K D+
Sbjct: 56 ---QLTDDDFLR-LLHEVGDSDALVVNVVDIFDFNGSVIPGLPRFVAGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + V W+ E ++ L + V LTS+++ I + +I+ +KGRDVY++G
Sbjct: 112 LPKSVKDSKVTQWLTERAHEEGLRPVDVVLTSAQNKQAIKELIDKIEHCRKGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G++D S PGTTL I+I G +YDTP
Sbjct: 172 TNVGKSTLINAIIQEITGDKDIITT---------SRFPGTTLDKIEI-PLADGSHIYDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + A++L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLSAKNLKYISPKKEIKPKTYQLNPEQ--------------TLFLGGLGR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + T Y L+++ + A +FY K +G L PP+GK+K E + L
Sbjct: 268 FDFV-AGDKQGFTAYFDNELKLHRTKLEGASDFYDKHVGSLLVPPVGKEKEE-FPAL--- 322
Query: 460 RLLEIKFEDTERPASDVAISGLGWISVE-PVR 490
+K E T + +D+ SGLGWI V P R
Sbjct: 323 ----VKHEFTIKDKTDIVFSGLGWIRVSGPAR 350
>gi|329116389|ref|ZP_08245106.1| ribosome biogenesis GTPase YqeH [Streptococcus parauberis NCFD
2020]
gi|326906794|gb|EGE53708.1| ribosome biogenesis GTPase YqeH [Streptococcus parauberis NCFD
2020]
Length = 372
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 124/396 (31%), Positives = 190/396 (47%), Gaps = 53/396 (13%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG +QT + GY KK + + C RC L H + IT V
Sbjct: 6 CIGCGINIQTENKEQAGYTPTGAL---KKGLETGELYCQRCFRLRHYNEITDVN------ 56
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
+S +E + L + AL++ ++DI DFNGS + + N ++LV K D+
Sbjct: 57 -----ISDEEFLKLLHEVGDSDALVINVIDIFDFNGSVIPGLSRFVSGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK V W+ E ++ L L V LTS+++ I + +I + +KGRDVY++G
Sbjct: 112 LPKSVKEGKVTQWLTERAHEEGLRPLDVILTSAQNNNAIKELIEKINQLRKGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G++D S PGTTL I+I G ++DTP
Sbjct: 172 TNVGKSTLINAIIQEITGDKDIITT---------SRFPGTTLDKIEI-PLDDGTFIFDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + A+DL ++P+ ++ +++ + SE T+F GGL R
Sbjct: 222 GIIHRHQMAHFLTAKDLKYISPKKEIKPKTYQLNSEQ--------------TLFLGGLGR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + T Y +L V+ + A EFYQK LG+ LTPP G E + L
Sbjct: 268 FDFISG-DKQGFTAYFDNNLMVHRTKLEGASEFYQKHLGLLLTPP-GPADKEDFPKL--- 322
Query: 460 RLLEIKFEDTERPASDVAISGLGWISVE-----PVR 490
+ E T +D+ SGLGW+ + PVR
Sbjct: 323 ----VPHEFTISDKTDLVFSGLGWLRINGSKDAPVR 354
>gi|422859067|ref|ZP_16905717.1| GTP-binding protein [Streptococcus sanguinis SK1057]
gi|327458847|gb|EGF05195.1| GTP-binding protein [Streptococcus sanguinis SK1057]
Length = 368
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 124/392 (31%), Positives = 192/392 (48%), Gaps = 49/392 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT + GY E K + + C RC L H + I+ V
Sbjct: 6 CIGCGATIQTEDKSKLGYTPQSALE---KGLETGELYCQRCFRLRHYNEISDV------- 55
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
Q D LR L + AL+V +VDI DFNGS + + N ++LV K D+
Sbjct: 56 ---QLTDDDFLR-LLHEVGDSDALVVNVVDIFDFNGSVIPGLPRFVAGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + + W+ E ++ L + V LTS+++ I + +I+ +KGRDVY++G
Sbjct: 112 LPKSVKDSKMTQWLTERAHEEGLRPVDVVLTSAQNKQAIKDLIDKIEHCRKGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G++D S PGTTL I+I G +YDTP
Sbjct: 172 TNVGKSTLINAIIQEITGDKDIITT---------SRFPGTTLDKIEI-PLADGSHIYDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + A++L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLSAKNLKYISPKKEIKPKTYQLNPEQ--------------TLFLGGLGR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + T Y L+++ + A +FY K +G L PP+GK+K E + L
Sbjct: 268 FDFV-AGDKQGFTAYFDNELKLHRTKLEGASDFYDKHVGGLLVPPVGKEKEE-FPAL--- 322
Query: 460 RLLEIKFEDTERPASDVAISGLGWISVE-PVR 490
+K E T + +D+ SGLGWI V P R
Sbjct: 323 ----VKHEFTIKDKTDIVFSGLGWIRVSGPAR 350
>gi|423558081|ref|ZP_17534383.1| ribosome biogenesis GTPase YqeH [Bacillus cereus MC67]
gi|401191349|gb|EJQ98371.1| ribosome biogenesis GTPase YqeH [Bacillus cereus MC67]
Length = 368
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 125/426 (29%), Positives = 191/426 (44%), Gaps = 66/426 (15%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG +QT + GY + E ++ V+C RC L H + I V
Sbjct: 7 CIGCGVEIQTENKNEVGYAPVSSLEKEQ-------VICQRCFRLKHYNEIQDVS------ 53
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ L+ + + AL+VK+VDI DFNGS+L + G N ++LV K DL
Sbjct: 54 -----LTDDDFLRILNGIGQSDALVVKIVDIFDFNGSWLPGLHRFVGNNKVLLVGNKADL 108
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
+PK + V W+ + + L V L S+ GI +A I+ ++G+DVY++G
Sbjct: 109 IPKSVKHDKVKHWMRYSAKQLGLKPEDVFLISAAKGQGITELADAIEHYREGKDVYVVGC 168
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS FIN ++K+ + + PGTTL I I LYDTPG
Sbjct: 169 TNVGKSTFINRMIKEFSDETENVITTSHF-------PGTTLDLIDI-PLDETSSLYDTPG 220
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ HH+ A V + L + P + ++ F + E T+F+GGL R
Sbjct: 221 IINHHQMAHYVGKQSLKLITPTTEVKPMVFQLNEEQ--------------TLFFGGLARF 266
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D + T + L ++ +KADE Y++ G L PP ++ E
Sbjct: 267 DYVSG-GRRAFTCHFSNRLTIHRTKLEKADELYERHAGEMLNPPT-PEELENMPDF---- 320
Query: 461 LLEIKFE-DTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVEV 519
+K+E + P +DV SGLGW++V + SG + HVPK V V
Sbjct: 321 ---VKYEFNIREPKTDVVFSGLGWVTV---------------NESGA-KIVAHVPKGVSV 361
Query: 520 FVRNPM 525
+R +
Sbjct: 362 SLRKSL 367
>gi|366085737|ref|ZP_09452222.1| GTPase YqeH [Lactobacillus zeae KCTC 3804]
Length = 374
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 124/392 (31%), Positives = 187/392 (47%), Gaps = 46/392 (11%)
Query: 95 NSAVASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVG 154
N C GCGA LQT++ PGY+ T K + C RC L H + I V
Sbjct: 6 NDEERRCIGCGAILQTTDPKQPGYLPAATL---AKADTEDDIYCQRCFRLRHYNEIAPVT 62
Query: 155 GNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILV 214
++ D+ L+ + ALIV ++DI DFNGS + + G NP+ILV
Sbjct: 63 -----------LTDDDFLRLLNAIGESNALIVNVIDIFDFNGSVIPGLHRFVGDNPVILV 111
Query: 215 VTKVDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRD 274
K D+LPK + N + +W+ + + L ++ L S+K G+ + S I+K ++ RD
Sbjct: 112 GNKADVLPKSLNPNRLKNWLQQQAKAQGLRPVATMLASAKKGFGVDELLSAIEKYREHRD 171
Query: 275 VYILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGK 334
VY++G N GKS IN ++K++ + S PGTTL I I G
Sbjct: 172 VYVVGVTNTGKSTLINRIIKELTGVENLITT--------SRFPGTTLDRIMI-PLDDGQS 222
Query: 335 LYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFW 394
L DTPG+ H+ A V +DL ++P S ++ ++ + NE G TIF
Sbjct: 223 LIDTPGIIHRHQMAHFVGPKDLKLVSPTSVIKPATYQL-------NE-------GQTIFL 268
Query: 395 GGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWK 454
GGL R D L+ ++ Y L ++ AD+FY K +G L PP + A+ +
Sbjct: 269 GGLARFDYLRGGRQS-FVIYTDNQLPLHRTKLINADDFYHKHVGGLLAPPQADEVAQ-FP 326
Query: 455 GLDRERLLEIKFEDTERPASDVAISGLGWISV 486
L ++FE T + SD+ +GLGWI+V
Sbjct: 327 PL-------VRFEFTPKEKSDLVFAGLGWITV 351
>gi|401682347|ref|ZP_10814241.1| ribosome biogenesis GTPase YqeH [Streptococcus sp. AS14]
gi|400184783|gb|EJO19021.1| ribosome biogenesis GTPase YqeH [Streptococcus sp. AS14]
Length = 368
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 125/392 (31%), Positives = 194/392 (49%), Gaps = 49/392 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT + GY E K + + C RC L H + I+ V
Sbjct: 6 CIGCGATIQTEDKGKLGYTPQSALE---KGLETGELYCQRCFRLRHYNEISDV------- 55
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
Q D LR L + AL+V +VDI DFNGS + + N ++LV K D+
Sbjct: 56 ---QLTDDDFLR-LLHEVGDSDALVVNVVDIFDFNGSVIPGLPRFVAGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + V W++E ++ L + V LTS+++ I + +I+ +KGRDVY++G
Sbjct: 112 LPKSVKDSKVTQWLMERAHEEGLRPVDVVLTSAQNKQAIKDLIDKIEYCRKGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G++D S PGTTL I+I G +YDTP
Sbjct: 172 TNVGKSTLINAIIQEITGDKDIITT---------SRFPGTTLDKIEI-PLADGSHIYDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + A++L ++P+ ++ +++ + N+ T+F GGL R
Sbjct: 222 GIIHRHQMAHYLSAKNLKYISPKKEIKPKTYQL-----NPNQ---------TLFLGGLGR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + T Y L+++ + A +FY K +G L PP+GK+K E + L
Sbjct: 268 FDFV-AGDKQGFTAYFDNELKLHRTKLEGASDFYDKHVGSLLVPPVGKEKKE-FPAL--- 322
Query: 460 RLLEIKFEDTERPASDVAISGLGWISVE-PVR 490
+K E T + +D+ SGLGWI V P R
Sbjct: 323 ----VKHEFTIKDKTDIVFSGLGWIRVSGPAR 350
>gi|419706291|ref|ZP_14233817.1| Putative conserved GTP-binding protein [Streptococcus salivarius
PS4]
gi|383283961|gb|EIC81899.1| Putative conserved GTP-binding protein [Streptococcus salivarius
PS4]
Length = 372
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 120/389 (30%), Positives = 191/389 (49%), Gaps = 50/389 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT + + GY + KK + + C RC L H + I V
Sbjct: 6 CIGCGAQIQTEDKEKAGYTPASSI---KKAEETGDLYCQRCFRLRHYNEIVDV------- 55
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ DE + L + AL+V +VDI DFNGS + + N ++LV K D+
Sbjct: 56 ----HITDDEFLKLLHEVGDSDALVVNVVDIFDFNGSIIPGLSRFVSGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK V W+ E ++ + + V LTS+++ I + I+K +KGRDVY++G
Sbjct: 112 LPKSVKDGKVTQWLTERAYEEGMRPVDVMLTSAQNHHAIKELIQRIEKLRKGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA++K++ G++D S PGTTL I+I G ++DTP
Sbjct: 172 TNVGKSTLINAIIKEITGDKDVITT---------SRFPGTTLDKIEI-PLDDGTYIFDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + A+DL ++P+ ++ +++ + + T+F GGL R
Sbjct: 222 GIIHRHQMAHYLSAKDLKYVSPKKEIKPKTYQLNASQ--------------TLFLGGLGR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGL-DR 458
D + + F+ +L+++ + AD FY K +G L PP G K L D
Sbjct: 268 FDFIDGDKQGFTAFF-DNNLKLHRTKLEGADTFYDKHVGSLLMPP-------GPKDLTDF 319
Query: 459 ERLLEIKFEDTERPASDVAISGLGWISVE 487
+L+ +F T + +D+ SGLGWI V+
Sbjct: 320 PKLVRHEF--TVKDKTDIVFSGLGWIRVQ 346
>gi|422883434|ref|ZP_16929883.1| GTP-binding protein [Streptococcus sanguinis SK49]
gi|332363372|gb|EGJ41157.1| GTP-binding protein [Streptococcus sanguinis SK49]
Length = 368
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 124/392 (31%), Positives = 190/392 (48%), Gaps = 49/392 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT + GY E K + + C RC L H + I+ V
Sbjct: 6 CIGCGATIQTEDKGKLGYTPQSALE---KGLETGELYCQRCFRLRHYNEISDV------- 55
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
Q D LR L + AL+V ++DI DFNGS + + N ++LV K D+
Sbjct: 56 ---QLTDDDFLR-LLHEVGDSDALVVNVIDIFDFNGSVIPGLPRFVAGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK V W+ E ++ L + V LTS+++ I + +I+ +KGRDVY++G
Sbjct: 112 LPKSVKDGKVTQWLTERAHEEGLRPVDVVLTSAQNKQAIKDLIDKIEHCRKGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G++D S PGTTL I+I G +YDTP
Sbjct: 172 TNVGKSTLINAIIQEITGDKDIITT---------SRFPGTTLDKIEI-PLADGSHIYDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + A++L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLSAKNLKYVSPKKEIKPKTYQLNPEQ--------------TLFLGGLGR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + T Y L+++ A EFY K +G L PP+GK++ E + L
Sbjct: 268 FDFV-AGDKQGFTAYFDNELKLHRTKLQGASEFYDKHVGSLLVPPVGKEREE-FPAL--- 322
Query: 460 RLLEIKFEDTERPASDVAISGLGWISVE-PVR 490
+K E T + +D+ SGLGWI V P R
Sbjct: 323 ----VKHEFTIKDKTDIVFSGLGWIRVSGPAR 350
>gi|320547439|ref|ZP_08041726.1| GTP-binding protein [Streptococcus equinus ATCC 9812]
gi|320447916|gb|EFW88672.1| GTP-binding protein [Streptococcus equinus ATCC 9812]
Length = 372
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 122/388 (31%), Positives = 188/388 (48%), Gaps = 48/388 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT + + GY E K + + C RC L H + IT V
Sbjct: 6 CIGCGAKIQTEDKEQAGYTPKAALE---KGLETGELYCQRCFRLRHYNEITDV------- 55
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ DE + L + AL+V +VDI DFNGS + + N ++LV K D+
Sbjct: 56 ----HITDDEFLKLLHEVGDSDALVVNVVDIFDFNGSVIPGLSRFVSGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK V W+ E ++ L + V LTS+++ I + +I+K +KGRDVY++G
Sbjct: 112 LPKSVKTGKVTQWLTERAHEEGLRPVDVILTSAQNHQAIKDLIEKIEKLRKGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA++K++ GE+D S PGTTL I+I G ++DTP
Sbjct: 172 TNVGKSTLINAIIKEITGEKDIITT---------SRFPGTTLDKIEI-PLDDGSYIFDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + ++L ++P+ ++ +++ + E T+F GL R
Sbjct: 222 GIIHRHQMAHYLGDKNLKYISPKKEIKPKTYQLNPEQ--------------TLFLAGLGR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + T Y +L+++ AD FY K +G LTPP K+ AE K
Sbjct: 268 FDFISG-DKQGFTAYFDNNLKLHRTKLAGADAFYDKHVGSLLTPPSDKELAEFPK----- 321
Query: 460 RLLEIKFEDTERPASDVAISGLGWISVE 487
++ E T + DV SGLGWI ++
Sbjct: 322 ---LVRHEFTIKDKMDVVYSGLGWIRIK 346
>gi|422879449|ref|ZP_16925915.1| GTP-binding protein [Streptococcus sanguinis SK1059]
gi|422929294|ref|ZP_16962236.1| GTP-binding protein [Streptococcus sanguinis ATCC 29667]
gi|422932265|ref|ZP_16965196.1| GTP-binding protein [Streptococcus sanguinis SK340]
gi|332366161|gb|EGJ43917.1| GTP-binding protein [Streptococcus sanguinis SK1059]
gi|339615110|gb|EGQ19793.1| GTP-binding protein [Streptococcus sanguinis ATCC 29667]
gi|339619049|gb|EGQ23639.1| GTP-binding protein [Streptococcus sanguinis SK340]
Length = 368
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 124/392 (31%), Positives = 192/392 (48%), Gaps = 49/392 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT + GY E K + + C RC L H + I+ V
Sbjct: 6 CIGCGATIQTEDKGKLGYTPQSALE---KGLETGELYCQRCFRLRHYNEISDV------- 55
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
Q D LR L + AL+V +VDI DFNGS + + N ++LV K D+
Sbjct: 56 ---QLTDDDFLR-LLHEVGDSDALVVNVVDIFDFNGSVIPGLPRFVAGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + V W+ E ++ L + V LTS+++ I + +I+ +KGRDVY++G
Sbjct: 112 LPKSVKDSKVTQWLTERAHEEGLRPVDVVLTSAQNKQAIKDLIDKIEYCRKGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G++D S PGTTL I+I G +YDTP
Sbjct: 172 TNVGKSTLINAIIQEITGDKDIITT---------SRFPGTTLDKIEI-PLADGSHIYDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + A++L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLSAKNLKYVSPKKEIKPKTYQLNPEQ--------------TLFLGGLGR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + T Y L+++ + A +FY K +G L PP+GK++ E + L
Sbjct: 268 FDFV-AGDKQGFTAYFDNELKLHRTKLEGASDFYDKHVGSLLVPPVGKEREE-FPAL--- 322
Query: 460 RLLEIKFEDTERPASDVAISGLGWISVE-PVR 490
+K E T + +D+ SGLGWI V P R
Sbjct: 323 ----VKHEFTIKDKTDIVFSGLGWIRVSGPAR 350
>gi|315038850|ref|YP_004032418.1| GTP-binding protein YqeH [Lactobacillus amylovorus GRL 1112]
gi|325957288|ref|YP_004292700.1| GTPase YqeH [Lactobacillus acidophilus 30SC]
gi|385818080|ref|YP_005854470.1| GTPase YqeH [Lactobacillus amylovorus GRL1118]
gi|312276983|gb|ADQ59623.1| GTP-binding protein YqeH [Lactobacillus amylovorus GRL 1112]
gi|325333853|gb|ADZ07761.1| GTPase YqeH [Lactobacillus acidophilus 30SC]
gi|327184018|gb|AEA32465.1| GTPase YqeH [Lactobacillus amylovorus GRL1118]
Length = 369
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 120/386 (31%), Positives = 184/386 (47%), Gaps = 46/386 (11%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA LQ+ + GY+ P + K ++ + V C RC L H + I V N
Sbjct: 7 CIGCGAVLQSDDPKKAGYL-PKSALDKARNEENAEVYCQRCFRLRHYNEIMPVDLNN--- 62
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
D+ L+ L +KAL+V +VD+ DF+ S L+ ++ G N ILV K DL
Sbjct: 63 --------DDFLALLNSLSEKKALVVNVVDLFDFSNSLLSSLKRFVGGNDFILVGNKFDL 114
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
PK + + + DW+ + + L + L S+K + + + I K+ + +DVY +G+
Sbjct: 115 FPKNSRQSKIKDWMRQEANRMGLYPKEIFLVSAKRKVNLESLIAYINKQSQDKDVYFVGT 174
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS INA++ MG+ S PGTTL I+I G L DTPG
Sbjct: 175 TNVGKSTLINAIIDMMGDIQNLIT--------TSRFPGTTLDRIEI-PLENGHFLIDTPG 225
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ ++ A ++A+DL ++P+ L+ ++ ++ G T+F GL RI
Sbjct: 226 IMTDNQLATHLNAKDLELISPKKPLKPATYQLMP--------------GNTLFLAGLGRI 271
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D LK T T Y + + V+ T AD FY+K +G L PP K KG +E
Sbjct: 272 DYLKG-ESTSFTVYVARDMYVHRTKTANADAFYEKHVGELLAPPAKDDKLPALKG--QEY 328
Query: 461 LLEIKFEDTERPASDVAISGLGWISV 486
E K SD+ G+G+++V
Sbjct: 329 RTEYK--------SDLLFGGIGFVTV 346
>gi|116495171|ref|YP_806905.1| GTP-binding protein YqeH [Lactobacillus casei ATCC 334]
gi|385820393|ref|YP_005856780.1| hypothetical protein LC2W_1864 [Lactobacillus casei LC2W]
gi|385823580|ref|YP_005859922.1| hypothetical protein LCBD_1885 [Lactobacillus casei BD-II]
gi|417987069|ref|ZP_12627631.1| GTP-binding protein YqeH [Lactobacillus casei 32G]
gi|417989965|ref|ZP_12630460.1| GTP-binding protein YqeH [Lactobacillus casei A2-362]
gi|417993212|ref|ZP_12633561.1| GTP-binding protein YqeH [Lactobacillus casei CRF28]
gi|417996556|ref|ZP_12636835.1| GTP-binding protein YqeH [Lactobacillus casei M36]
gi|417999427|ref|ZP_12639636.1| GTP-binding protein YqeH [Lactobacillus casei T71499]
gi|418005414|ref|ZP_12645407.1| GTP-binding protein YqeH [Lactobacillus casei UW1]
gi|418013175|ref|ZP_12652828.1| GTP-binding protein YqeH [Lactobacillus casei Lpc-37]
gi|116105321|gb|ABJ70463.1| Predicted GTPase [Lactobacillus casei ATCC 334]
gi|327382720|gb|AEA54196.1| hypothetical protein LC2W_1864 [Lactobacillus casei LC2W]
gi|327385907|gb|AEA57381.1| hypothetical protein LCBD_1885 [Lactobacillus casei BD-II]
gi|410524133|gb|EKP99050.1| GTP-binding protein YqeH [Lactobacillus casei 32G]
gi|410531684|gb|EKQ06400.1| GTP-binding protein YqeH [Lactobacillus casei CRF28]
gi|410535402|gb|EKQ10027.1| GTP-binding protein YqeH [Lactobacillus casei M36]
gi|410536787|gb|EKQ11378.1| GTP-binding protein YqeH [Lactobacillus casei A2-362]
gi|410539058|gb|EKQ13596.1| GTP-binding protein YqeH [Lactobacillus casei T71499]
gi|410546811|gb|EKQ21055.1| GTP-binding protein YqeH [Lactobacillus casei UW1]
gi|410556122|gb|EKQ30044.1| GTP-binding protein YqeH [Lactobacillus casei Lpc-37]
Length = 374
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 123/387 (31%), Positives = 184/387 (47%), Gaps = 48/387 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA LQT++ PGY+ T K + C RC L H + I V
Sbjct: 12 CIGCGAILQTTDPKKPGYLPKATLS---KADPDDEIYCQRCFRLRHYNEIAPVT------ 62
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ L+ + ALIV ++DI DFNGS + + G NP+ILV K D+
Sbjct: 63 -----LTDDDFLRLLNAIGESNALIVNVIDIFDFNGSVIPGLHRFVGDNPVILVGNKADV 117
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + N + +W+ + + L ++ L S+K G+ + I+K + RDVY++G
Sbjct: 118 LPKSLNPNRLKNWLQQQAKAQGLRPVATMLASAKKGFGVDELLDAIEKYRDHRDVYVVGV 177
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
N GKS IN ++K++ G D S PGTTL I I G L DTP
Sbjct: 178 TNTGKSTLINRIIKELTGVEDLITT---------SRFPGTTLDRIMI-PLDDGQSLIDTP 227
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A V +DL ++P S ++ ++ + NE G TIF GGL R
Sbjct: 228 GIIHRHQMAHFVGPKDLKLVSPTSVIKPATYQL-------NE-------GQTIFLGGLAR 273
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D L+ Y L ++ + AD+FYQK +G L+PP + + L
Sbjct: 274 FDYLRG-GRNSFVIYTDNQLTLHRTKLENADDFYQKHVGGLLSPP-QPDEVPDFPPL--- 328
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
++FE T + +D+ +GLGWI+V
Sbjct: 329 ----VRFEFTPKEKADLVFAGLGWITV 351
>gi|421873989|ref|ZP_16305598.1| ribosome biogenesis GTPase YqeH [Brevibacillus laterosporus GI-9]
gi|372457100|emb|CCF15147.1| ribosome biogenesis GTPase YqeH [Brevibacillus laterosporus GI-9]
Length = 379
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 136/426 (31%), Positives = 198/426 (46%), Gaps = 67/426 (15%)
Query: 99 ASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGG 158
SC GCG +QT PGY LK++ V+C RC + H + + V
Sbjct: 15 VSCAGCGVEIQTENKAKPGYAPASA--LKRE-----VVICQRCFRIKHYNEVAPVE---- 63
Query: 159 YAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKV 218
+ D+ L+ + K L+V +VD+ DF GS+L + G NPI+LV KV
Sbjct: 64 -------MHDDDFLRILNGIGSTKCLVVMVVDLFDFQGSWLRGLPRFVGQNPILLVGNKV 116
Query: 219 DLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYIL 278
DLLP+ + N V +W+ ++ L V L S++ GI + + I + +KGRDVYI+
Sbjct: 117 DLLPRNINLNRVKNWIQHEAKERGLKPNEVVLVSAEKGTGIDELLARIGEFRKGRDVYIV 176
Query: 279 GSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDT 338
G NVGKS IN +L G AA M P PGTTL I+I G ++DT
Sbjct: 177 GVTNVGKSTLINRILHDYG----AADMEITTSPF----PGTTLDKIEI-PLEDGRSIFDT 227
Query: 339 PGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLV 398
PG+ + +V EDL L P+SR+ + F + + T+F+GGL
Sbjct: 228 PGIINRDQIGHLVSPEDLRKLTPKSRINPRVFQLNDKQ--------------TLFFGGLA 273
Query: 399 RIDLLK--VLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGL 456
R+D ++ P C Y L ++ D A+E +K G L PP G E K L
Sbjct: 274 RVDYVRGERQPFAC---YLANDLYIHRTKLDNAEEVLEKHHGEMLAPPSG----EAAKAL 326
Query: 457 DRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKP 516
+K DT P +D+ I+GLGWI+++ + + + VHVPK
Sbjct: 327 LPFTRYTLKI-DTNGP-TDIVIAGLGWIALQGKVKGV---------------VEVHVPKG 369
Query: 517 VEVFVR 522
V V +R
Sbjct: 370 VSVGLR 375
>gi|374324962|ref|YP_005078091.1| hypothetical protein HPL003_25760 [Paenibacillus terrae HPL-003]
gi|357203971|gb|AET61868.1| hypothetical protein HPL003_25760 [Paenibacillus terrae HPL-003]
Length = 375
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 121/422 (28%), Positives = 201/422 (47%), Gaps = 63/422 (14%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG +QT+ + PGY+ +K + V+C RC + + + ++V
Sbjct: 13 CSGCGITMQTTSPELPGYI-------PEKLLTREPVICQRCFRIKNYNETSSVA------ 59
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
V DE + LS + + AL++ +VDI DF GS ++ ++ G+NP++L V K DL
Sbjct: 60 -----VDQDEFLKLLSQIGDKDALVIHIVDIFDFEGSLISGLQRFVGSNPVVLAVNKTDL 114
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK T++N V +WV + ++ L + L S++ G + + + + RDVY++G+
Sbjct: 115 LPKVTNWNKVLNWVQKQAKEQGLRTADIVLCSAQKNQGFDRLLDVVSELRGNRDVYVVGA 174
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS IN L++ + M Q+ S PGTTL + I G + DTPG
Sbjct: 175 TNVGKSTLINRLIRDHSD------MEQEL--TTSRYPGTTLDMVNI-PLDDGKHIIDTPG 225
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ R + +V +DL A+ P L+ ++ + G T+F+GG+ R
Sbjct: 226 IVYPWRFSEIVSRQDLSAIMPDKPLKPAAYQLDP--------------GQTLFFGGMARF 271
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D ++ ++ T Y L+++ ++AD+ ++ G L+PP Q A D
Sbjct: 272 DFVEGQHQS-FTCYINGGLKIHRTKLERADQLFEDHAGELLSPPTRDQLA------DMPE 324
Query: 461 LLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVEVF 520
+F + D+ ISGLGWI V S +G L +AVH P+ + V
Sbjct: 325 WTRHEFRVPRKSQLDIYISGLGWIRV--------------NSENGAL-VAVHAPRGIRVL 369
Query: 521 VR 522
+R
Sbjct: 370 LR 371
>gi|306829001|ref|ZP_07462192.1| ribosome biogenesis GTPase YqeH [Streptococcus mitis ATCC 6249]
gi|304428806|gb|EFM31895.1| ribosome biogenesis GTPase YqeH [Streptococcus mitis ATCC 6249]
Length = 368
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 121/387 (31%), Positives = 192/387 (49%), Gaps = 48/387 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT++ G+ E K + V C RC L H + IT V
Sbjct: 6 CIGCGATIQTTDKAGLGFTPQSALE---KGLETGEVYCQRCFRLRHYNEITDVQ------ 56
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ + L + AL+V ++DI DFNGS + + N ++LV K D+
Sbjct: 57 -----LTDDDFLKLLHEVGDSDALVVNVIDIFDFNGSVIPGLPRFVSGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W++E ++ L + V LTS+++ I V +I+ +KGRDVY++G
Sbjct: 112 LPKSVKPGKISQWLLERAHEEGLRPVDVVLTSAQNKHAIKEVIDKIEHYRKGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G+++ S PGTTL I+I G +YDTP
Sbjct: 172 TNVGKSTLINAIIQEITGDQNVITT---------SRFPGTTLDKIEI-PLDDGSYIYDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + A++L ++P+ ++ +++ + SE T+F GGL R
Sbjct: 222 GIIHRHQMAHYLTAKNLKYVSPKKEIKPKTYQLNSEQ--------------TLFLGGLGR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + F+ L+++ + A FY K LG LTPP K+K D
Sbjct: 268 FDFIAGEKQGFTAFF-DNELKLHRTKLEGASAFYDKHLGTLLTPPNSKEKE------DFP 320
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
+L+E F T + +D+ ISGLGWI V
Sbjct: 321 KLVEHVF--TIKDKTDLVISGLGWIRV 345
>gi|409997539|ref|YP_006751940.1| hypothetical protein BN194_18740 [Lactobacillus casei W56]
gi|406358551|emb|CCK22821.1| Uncharacterized protein yqeH [Lactobacillus casei W56]
Length = 409
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 123/387 (31%), Positives = 184/387 (47%), Gaps = 48/387 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA LQT++ PGY+ T K + C RC L H + I V
Sbjct: 47 CIGCGAILQTTDPKKPGYLPKATLS---KADPDDEIYCQRCFRLRHYNEIAPVT------ 97
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ L+ + ALIV ++DI DFNGS + + G NP+ILV K D+
Sbjct: 98 -----LTDDDFLRLLNAIGESNALIVNVIDIFDFNGSVIPGLHRFVGDNPVILVGNKADV 152
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + N + +W+ + + L ++ L S+K G+ + I+K + RDVY++G
Sbjct: 153 LPKSLNPNRLKNWLQQQAKAQGLRPVATMLASAKKGFGVDELLDAIEKYRDHRDVYVVGV 212
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
N GKS IN ++K++ G D S PGTTL I I G L DTP
Sbjct: 213 TNTGKSTLINRIIKELTGVEDLITT---------SRFPGTTLDRIMI-PLDDGQSLIDTP 262
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A V +DL ++P S ++ ++ + NE G TIF GGL R
Sbjct: 263 GIIHRHQMAHFVGPKDLKLVSPTSVIKPATYQL-------NE-------GQTIFLGGLAR 308
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D L+ Y L ++ + AD+FYQK +G L+PP + + L
Sbjct: 309 FDYLRG-GRNSFVIYTDNQLTLHRTKLENADDFYQKHVGGLLSPP-QPDEVPDFPPL--- 363
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
++FE T + +D+ +GLGWI+V
Sbjct: 364 ----VRFEFTPKEKADLVFAGLGWITV 386
>gi|322373553|ref|ZP_08048089.1| ribosome biogenesis GTPase YqeH [Streptococcus sp. C150]
gi|321278595|gb|EFX55664.1| ribosome biogenesis GTPase YqeH [Streptococcus sp. C150]
Length = 372
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 120/389 (30%), Positives = 191/389 (49%), Gaps = 50/389 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT + + GY + KK + + C RC L H + I V
Sbjct: 6 CIGCGAQIQTEDKEKAGYTPASSI---KKAEETGDLYCQRCFRLRHYNEIVDV------- 55
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ DE + L + AL+V +VDI DFNGS + + N ++LV K D+
Sbjct: 56 ----HITDDEFLKLLHEVGDSDALVVNVVDIFDFNGSIIPGLSRFVSGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK V W+ E ++ + + V LTS+++ I + I+K +KGRDVY++G
Sbjct: 112 LPKSVKDGKVTQWLTERAYEEGMRPVDVMLTSAQNHHAIKELIKRIEKLRKGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA++K++ G++D S PGTTL I+I G ++DTP
Sbjct: 172 TNVGKSTLINAIIKEITGDKDVITT---------SRFPGTTLDKIEI-PLDDGTYIFDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + A+DL ++P+ ++ +++ + + T+F GGL R
Sbjct: 222 GIIHRHQMAHYLSAKDLKYVSPKKEIKPKTYQLNASQ--------------TLFLGGLGR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGL-DR 458
D + + F+ +L+++ + AD FY K +G L PP G K L D
Sbjct: 268 FDFIDGDKQGFTAFF-DNNLKLHRTKLEGADAFYDKHVGSLLMPP-------GPKDLTDF 319
Query: 459 ERLLEIKFEDTERPASDVAISGLGWISVE 487
+L+ +F T + +D+ SGLGWI V+
Sbjct: 320 PKLVRHEF--TVKDKTDIVFSGLGWIRVQ 346
>gi|229076010|ref|ZP_04208983.1| hypothetical protein bcere0024_40490 [Bacillus cereus Rock4-18]
gi|229098807|ref|ZP_04229745.1| hypothetical protein bcere0020_40330 [Bacillus cereus Rock3-29]
gi|407706863|ref|YP_006830448.1| stage IV sporulation protein FA [Bacillus thuringiensis MC28]
gi|423440915|ref|ZP_17417821.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG4X2-1]
gi|423448917|ref|ZP_17425796.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG5O-1]
gi|423463980|ref|ZP_17440748.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG6O-1]
gi|423533343|ref|ZP_17509761.1| ribosome biogenesis GTPase YqeH [Bacillus cereus HuB2-9]
gi|423541402|ref|ZP_17517793.1| ribosome biogenesis GTPase YqeH [Bacillus cereus HuB4-10]
gi|228684651|gb|EEL38591.1| hypothetical protein bcere0020_40330 [Bacillus cereus Rock3-29]
gi|228707122|gb|EEL59322.1| hypothetical protein bcere0024_40490 [Bacillus cereus Rock4-18]
gi|401129511|gb|EJQ37194.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG5O-1]
gi|401172590|gb|EJQ79811.1| ribosome biogenesis GTPase YqeH [Bacillus cereus HuB4-10]
gi|402417576|gb|EJV49876.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG4X2-1]
gi|402420247|gb|EJV52518.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG6O-1]
gi|402463562|gb|EJV95262.1| ribosome biogenesis GTPase YqeH [Bacillus cereus HuB2-9]
gi|407384548|gb|AFU15049.1| Yqeh Gtpase [Bacillus thuringiensis MC28]
Length = 368
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 127/427 (29%), Positives = 190/427 (44%), Gaps = 68/427 (15%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG +QT + GY + E ++ V+C RC L H + I V
Sbjct: 7 CIGCGVEIQTENKNEVGYAPASSLEKEQ-------VICQRCFRLKHYNEIQDVS------ 53
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ L+ + R AL+VK+VDI DFNGS+L + G N ++LV K DL
Sbjct: 54 -----LTDDDFLRILNGIGRSDALVVKIVDIFDFNGSWLPGLHRFVGNNKVLLVGNKADL 108
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
+PK + V W+ + + L V L S+ GI +A I+ + G+DVY++G
Sbjct: 109 IPKSVKHDKVKHWMRYSAKQLGLKPEDVFLISAAKGQGIAELADAIEYYRDGKDVYVVGC 168
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS FIN ++K+ + + PGTTL I I LYDTPG
Sbjct: 169 TNVGKSTFINRMIKEFSDETENVITTSHF-------PGTTLDLIDI-PLDEESSLYDTPG 220
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ HH+ A V E L + P ++ F + E T+F+ GL R
Sbjct: 221 IINHHQMAHYVGKESLKLITPTKEIKPMVFQLNEEQ--------------TLFFSGLARF 266
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D + T + L ++ +KADE Y+ G L+PP ++ E
Sbjct: 267 DYVSG-GRRAFTCHFSNRLTIHRTKLEKADELYKNHAGDLLSPPTPEE---------LEN 316
Query: 461 LLE-IKFE-DTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVE 518
+ E +K+E + P +DV SGLGW++V + SG + HVPK V
Sbjct: 317 MPELVKYEFNIREPKTDVVFSGLGWVTV---------------NESGA-KIVAHVPKGVS 360
Query: 519 VFVRNPM 525
V +R +
Sbjct: 361 VSLRKSL 367
>gi|229019560|ref|ZP_04176376.1| hypothetical protein bcere0030_40630 [Bacillus cereus AH1273]
gi|229025801|ref|ZP_04182200.1| hypothetical protein bcere0029_40920 [Bacillus cereus AH1272]
gi|423389347|ref|ZP_17366573.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG1X1-3]
gi|423417740|ref|ZP_17394829.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG3X2-1]
gi|228735509|gb|EEL86105.1| hypothetical protein bcere0029_40920 [Bacillus cereus AH1272]
gi|228741726|gb|EEL91910.1| hypothetical protein bcere0030_40630 [Bacillus cereus AH1273]
gi|401106911|gb|EJQ14868.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG3X2-1]
gi|401641438|gb|EJS59155.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG1X1-3]
Length = 368
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 125/427 (29%), Positives = 193/427 (45%), Gaps = 68/427 (15%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG +QT + GY + E ++ V+C RC L H + I V
Sbjct: 7 CIGCGVEIQTENKNEVGYAPASSLEKEQ-------VICQRCFRLKHYNEIQDVS------ 53
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ L+ + + AL+VK+VDI DFNGS+L + G N ++LV K DL
Sbjct: 54 -----LTDDDFLRILNGIGQSDALVVKIVDIFDFNGSWLPGLHRFVGNNKVLLVGNKADL 108
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
+PK + V W+ + + L V L S+ GI +A I+ ++G+DVY++G
Sbjct: 109 IPKSVKHDKVKHWMRYSAKQLGLKPEDVFLISAAKGQGITELADAIEYYREGKDVYVVGC 168
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS FIN ++K+ + + PGTTL I I L+DTPG
Sbjct: 169 TNVGKSTFINRMIKEFSDETENVITTSHF-------PGTTLDLIDI-PLDEESSLFDTPG 220
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ HH+ A V + L + P + ++ F + E T+F+GGL R
Sbjct: 221 IINHHQMAHYVGKQSLKLITPTTEIKPMVFQLNEEQ--------------TLFFGGLARF 266
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D + T + L ++ +KADE Y++ G L PP ++ E
Sbjct: 267 DYVSG-GRRAFTCHFSNRLTIHRTKLEKADELYERHAGELLNPPTPEE---------LEN 316
Query: 461 LLE-IKFE-DTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVE 518
+ E +K+E + P +DV SGLGW++V + SG + HVPK V
Sbjct: 317 MPEFVKYEFNIREPKTDVVFSGLGWVTV---------------NESGA-KIVAHVPKGVS 360
Query: 519 VFVRNPM 525
V +R +
Sbjct: 361 VSLRKSL 367
>gi|256616683|ref|ZP_05473529.1| nitric-oxide synthase [Enterococcus faecalis ATCC 4200]
gi|256596210|gb|EEU15386.1| nitric-oxide synthase [Enterococcus faecalis ATCC 4200]
Length = 375
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 130/402 (32%), Positives = 196/402 (48%), Gaps = 50/402 (12%)
Query: 89 DKVLKVNSAVASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGH 148
++ +++ A+ C GCGA +QT GY +E K + V C RC L H +
Sbjct: 2 ERRIRMTEAI-HCIGCGAIIQTENPHELGYTPKTAFE---KGMETGEVYCQRCFRLRHYN 57
Query: 149 MITAVGGNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGA 208
I V Q D LR L+ L E ALIV +VDI DFNGS + + G
Sbjct: 58 DIQDV----------QLTDDDFLR-LLNGLGTEDALIVNVVDIFDFNGSLIPGLHRFIGD 106
Query: 209 NPIILVVTKVDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQK 268
NP++LV KVD+LPK + W+ E + L + V LTS K + + I+K
Sbjct: 107 NPVLLVGNKVDILPKSLKKTKMVQWMRERAHEAGLRPVDVLLTSGKKPQEMQELLDTIEK 166
Query: 269 EKKGRDVYILGSANVGKSAFINALLKK-MGERDPAAAMAQKYRPIQSAVPGTTLGPIQID 327
++GRDVY++G NVGKS IN ++++ +G +D S PGTTL I+I
Sbjct: 167 YREGRDVYVVGVTNVGKSTLINQIIQQTVGVQDVITT---------SQFPGTTLDKIEI- 216
Query: 328 AFLGGGKLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGL 387
G L DTPG+ H+ A + +DL +APQ ++ + + + +E
Sbjct: 217 PLDDGHFLIDTPGIIHRHQMAHYLGKKDLKIIAPQKEIKPKVYQLNAEQ----------- 265
Query: 388 NGFTIFWGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGK 447
T+F GGL R D ++ ++ Y L+++ T AD FY+K +G L PP
Sbjct: 266 ---TLFLGGLARFDYVQG-AKSSFIAYVSNDLKLHRTKTATADAFYEKHVGGLLQPPRAD 321
Query: 448 QKAEGWKGLDRERLLEIKFEDTERPASDVAISGLGWISV-EP 488
+ AE + L ++FE + + +D+ +GLGWI+V EP
Sbjct: 322 EVAE-FPEL-------VRFEFSVKEKTDIVFAGLGWITVTEP 355
>gi|392429164|ref|YP_006470175.1| GTP-binding protein [Streptococcus intermedius JTH08]
gi|419776069|ref|ZP_14301992.1| ribosome biogenesis GTPase YqeH [Streptococcus intermedius SK54]
gi|383846277|gb|EID83676.1| ribosome biogenesis GTPase YqeH [Streptococcus intermedius SK54]
gi|391758310|dbj|BAM23927.1| GTP-binding protein [Streptococcus intermedius JTH08]
Length = 368
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 125/387 (32%), Positives = 185/387 (47%), Gaps = 48/387 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGAP+QT D GY E K + + C RC L H + IT V
Sbjct: 6 CIGCGAPIQTKHKDKMGYTPQSALE---KGLETGELYCQRCFRLRHYNEITDV------- 55
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
Q D LR L + AL+V +VDI DFNGS + + N ++LV K D+
Sbjct: 56 ---QLTDDDFLR-LLHEVGDSNALVVNVVDIFDFNGSIIPGLPRFVAGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK N V W+ E ++ L + V LTS+++ I + +I++ +KGRDVY++G
Sbjct: 112 LPKSVKSNKVTQWLTERAHEEGLRPIDVVLTSAQNKQAIKELMEKIEQYRKGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G++D S PGTTL I+I G +YDTP
Sbjct: 172 TNVGKSTLINAIIQEITGDKDIITT---------SRFPGTTLDKIEI-PLDDGSHIYDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ ++ A + A+ L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRYQMAHYLSAKHLKYVSPKKEIKPKTYQLNPEQ--------------TLFLGGLGR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + T Y L+++ A EFY K +G LTPP ++ K + E
Sbjct: 268 FDFVSG-DKQGFTAYFDNELKLHRTKLAGAGEFYNKHVGSLLTPPSKQELPTFPKLVKHE 326
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
+E K DV SGLGWI V
Sbjct: 327 LKIETKI--------DVVFSGLGWIRV 345
>gi|339010606|ref|ZP_08643176.1| GTP binding protein [Brevibacillus laterosporus LMG 15441]
gi|338772761|gb|EGP32294.1| GTP binding protein [Brevibacillus laterosporus LMG 15441]
Length = 379
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 136/426 (31%), Positives = 198/426 (46%), Gaps = 67/426 (15%)
Query: 99 ASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGG 158
SC GCG +QT PGY LK++ V+C RC + H + + V
Sbjct: 15 VSCAGCGVEIQTENKAKPGYAPASA--LKRE-----VVICQRCFRIKHYNEVAPVE---- 63
Query: 159 YAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKV 218
+ D+ L+ + K L+V +VD+ DF GS+L + G NPI+LV KV
Sbjct: 64 -------MHDDDFLRILNGIGSTKCLVVMVVDLFDFQGSWLRGLPRFVGQNPILLVGNKV 116
Query: 219 DLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYIL 278
DLLP+ + N V +W+ ++ L V L S++ GI + + I + +KGRDVYI+
Sbjct: 117 DLLPRNINLNRVKNWIQHEAKERGLKPNEVVLVSAEKGIGIDELLARIGEFRKGRDVYIV 176
Query: 279 GSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDT 338
G NVGKS IN +L G AA M P PGTTL I+I G ++DT
Sbjct: 177 GVTNVGKSTLINRILHDYG----AADMEITTSPF----PGTTLDKIEI-PLEDGRSIFDT 227
Query: 339 PGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLV 398
PG+ + +V EDL L P+SR+ + F + + T+F+GGL
Sbjct: 228 PGIINRDQIGHLVSPEDLRKLTPKSRINPRVFQLNDKQ--------------TLFFGGLA 273
Query: 399 RIDLLK--VLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGL 456
R+D ++ P C Y L ++ D A+E +K G L PP G E K L
Sbjct: 274 RVDYVRGERQPFAC---YLANDLYIHRTKLDNAEEVLEKHHGEMLAPPSG----EAAKAL 326
Query: 457 DRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKP 516
+K DT P +D+ I+GLGWI+++ + + + VHVPK
Sbjct: 327 LPFTRYTLKI-DTNGP-TDIVIAGLGWIALQGKVKGV---------------VEVHVPKG 369
Query: 517 VEVFVR 522
V V +R
Sbjct: 370 VSVGLR 375
>gi|448238803|ref|YP_007402861.1| GTPase [Geobacillus sp. GHH01]
gi|445207645|gb|AGE23110.1| GTPase [Geobacillus sp. GHH01]
Length = 369
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 129/425 (30%), Positives = 191/425 (44%), Gaps = 63/425 (14%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +Q + GY E ++ ++C RC L H + + V
Sbjct: 7 CIGCGAAIQFDDPKKAGYAPKSVLEKDEEE-----IICQRCFRLKHYNEVQDVP------ 55
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
+ + L + KAL+V +VDI DFNGS++ + A NPI+LV K DL
Sbjct: 56 -----LDDSDFLNMLHRIGESKALVVNIVDIFDFNGSWIPGLPRFAAENPILLVGNKADL 110
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LP+ + + W+ + L + V L S+ G+ V I + ++G DVY++G
Sbjct: 111 LPRSVKYPKLLRWMRRMAEELGLCPVDVCLVSAAKGIGMAKVMEAINRYREGGDVYVVGC 170
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS FIN ++++ A + S PGTTL I+I G LYDTPG
Sbjct: 171 TNVGKSTFINRIIEE--------ATGKGNVITTSYFPGTTLDMIEI-PLESGATLYDTPG 221
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ HH+ A V A DL + P+ + + + + NE G T+F+GGL R+
Sbjct: 222 IINHHQMAHFVDARDLKIITPKREIHPRVYQL-------NE-------GQTLFFGGLARL 267
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D +K Y L V+ +KAD Y +LG L+PP + AE + R
Sbjct: 268 DYIKG-GRRSFVCYMANELTVHRTKLEKADSLYANQLGDLLSPPNKRYAAEFPPLVPRS- 325
Query: 461 LLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVEVF 520
L +K ER +D+ SGLGW++ L VH PK V+VF
Sbjct: 326 -LSVK----ER-KTDIVFSGLGWVT----------------CNDPGAQLVVHAPKGVDVF 363
Query: 521 VRNPM 525
+R +
Sbjct: 364 IRQSL 368
>gi|228477071|ref|ZP_04061709.1| ribosome biogenesis GTPase YqeH [Streptococcus salivarius SK126]
gi|228251090|gb|EEK10261.1| ribosome biogenesis GTPase YqeH [Streptococcus salivarius SK126]
Length = 372
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 119/388 (30%), Positives = 190/388 (48%), Gaps = 48/388 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT + + GY + KK + + C RC L H + I V
Sbjct: 6 CIGCGAQIQTEDKEKAGYTPASSI---KKAEETGELYCQRCFRLRHYNEIVDV------- 55
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ DE + L + AL+V +VDI DFNGS + + N ++LV K D+
Sbjct: 56 ----HITDDEFLKLLHEVGDSDALVVNVVDIFDFNGSIIPGLSRFVSGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK V W+ E ++ + + V LTS+++ I + I+K +K RDVY++G
Sbjct: 112 LPKSVKDGKVTQWLTERAHEEGMRPVDVMLTSAQNHHAIKELIQRIEKLRKSRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA++K++ G++D S PGTTL I+I G ++DTP
Sbjct: 172 TNVGKSTLINAIIKEITGDKDIITT---------SRFPGTTLDKIEI-PLDDGTYIFDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + A+DL ++P+ ++ +++ + + G T+F GGL R
Sbjct: 222 GIIHRHQMAHYLSAKDLKYVSPKKEIKPKTYQLNA--------------GQTLFLGGLGR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + F+ +L+++ + AD FY K +G L PP K A D
Sbjct: 268 FDFIDGNKQGFTAFF-DNNLKLHRTKLEGADAFYDKHVGSLLMPPGPKDLA------DFP 320
Query: 460 RLLEIKFEDTERPASDVAISGLGWISVE 487
+L+ +F T + +D+ SGLGWI V+
Sbjct: 321 KLVRHEF--TVKDKTDIVFSGLGWIRVQ 346
>gi|227534814|ref|ZP_03964863.1| GTP-binding protein [Lactobacillus paracasei subsp. paracasei ATCC
25302]
gi|418002385|ref|ZP_12642504.1| GTP-binding protein YqeH [Lactobacillus casei UCD174]
gi|227187570|gb|EEI67637.1| GTP-binding protein [Lactobacillus paracasei subsp. paracasei ATCC
25302]
gi|410544288|gb|EKQ18622.1| GTP-binding protein YqeH [Lactobacillus casei UCD174]
Length = 374
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 123/387 (31%), Positives = 184/387 (47%), Gaps = 48/387 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA LQT++ PGY+ T K + C RC L H + I V
Sbjct: 12 CIGCGAILQTTDPKKPGYLPKATLS---KADPDDEIYCQRCFRLRHYNEIAPVT------ 62
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ L+ + ALIV ++DI DFNGS + + G NP+ILV K D+
Sbjct: 63 -----LTDDDFLRLLNAIGESNALIVNVIDIFDFNGSVIPGLHRFVGDNPVILVGNKADV 117
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + N + +W+ + + L + L S+K G+ + I+K + RDVY++G
Sbjct: 118 LPKSLNPNRLKNWLQQQAKAQGLRPVVTMLASAKKGFGVDELLDAIEKYRDHRDVYVVGV 177
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
N GKS IN ++K++ G D S PGTTL I I G L DTP
Sbjct: 178 TNTGKSTLINRIIKELTGVEDLITT---------SRFPGTTLDRIMI-PLDDGQSLIDTP 227
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A V +DL ++P S ++ ++ + NE G TIF GGL R
Sbjct: 228 GIIHRHQMAHFVGPKDLKLVSPTSVIKPATYQL-------NE-------GQTIFLGGLAR 273
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D L+ Y L ++ + AD+FYQK +G L+PP + + + L
Sbjct: 274 FDYLRG-GRNSFVIYTDNQLTLHRTKLENADDFYQKHVGGLLSPPQADEVPD-FPPL--- 328
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
++FE T + +D+ +GLGWI+V
Sbjct: 329 ----VRFEFTPKEKADLVFAGLGWITV 351
>gi|301066734|ref|YP_003788757.1| GTPase [Lactobacillus casei str. Zhang]
gi|417980881|ref|ZP_12621558.1| GTP-binding protein YqeH [Lactobacillus casei 12A]
gi|417983709|ref|ZP_12624345.1| GTP-binding protein YqeH [Lactobacillus casei 21/1]
gi|300439141|gb|ADK18907.1| Predicted GTPase [Lactobacillus casei str. Zhang]
gi|410523817|gb|EKP98736.1| GTP-binding protein YqeH [Lactobacillus casei 12A]
gi|410527978|gb|EKQ02840.1| GTP-binding protein YqeH [Lactobacillus casei 21/1]
Length = 374
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 122/387 (31%), Positives = 185/387 (47%), Gaps = 48/387 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA LQT++ PGY+ T K + C RC L H + I V
Sbjct: 12 CIGCGAILQTTDPKKPGYLPKATLS---KADPDDEIYCQRCFRLRHYNEIAPVT------ 62
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ L+ + ALIV ++DI DFNGS + + G NP+ILV K D+
Sbjct: 63 -----LTDDDFLRLLNAIGESNALIVNVIDIFDFNGSVIPGLHRFVGDNPVILVGNKADV 117
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + N + +W+ + + L ++ L S+K G+ + I++ + RDVY++G
Sbjct: 118 LPKSLNPNRLKNWLQQQAKAQGLRPVATMLASAKKGFGVDELLDAIEQYRDHRDVYVVGV 177
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
N GKS IN ++K++ G D S PGTTL I I G L DTP
Sbjct: 178 TNTGKSTLINRIIKELTGVEDLITT---------SRFPGTTLDRIMI-PLDDGQSLIDTP 227
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A V +DL ++P S ++ ++ + NE G TIF GGL R
Sbjct: 228 GIIHRHQMAHFVGPKDLKLVSPTSVIKPATYQL-------NE-------GQTIFLGGLAR 273
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D L+ Y L ++ + AD+FYQK +G L+PP + + + L
Sbjct: 274 FDYLRG-GRNSFVIYTDNQLTLHRTKLENADDFYQKHVGGLLSPPQADEVPD-FPPL--- 328
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
++FE T + +D+ +GLGWI+V
Sbjct: 329 ----VRFEFTPKEKADLVFAGLGWITV 351
>gi|422719674|ref|ZP_16776305.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0017]
gi|315033123|gb|EFT45055.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0017]
Length = 369
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 129/390 (33%), Positives = 189/390 (48%), Gaps = 49/390 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT GY +E K + V C RC L H + I V
Sbjct: 7 CIGCGAIIQTENPHELGYTPKTAFE---KGMETGEVYCQRCFRLRHYNDIQDV------- 56
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
Q D LR L+ L E ALIV +VDI DFNGS + + G NP++LV KVD+
Sbjct: 57 ---QLTDDDFLR-LLNGLGTEDALIVNVVDIFDFNGSLIPGLHRFIGDNPVLLVGNKVDI 112
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W+ E + L + V LTS K + + I+K ++GRDVY++G
Sbjct: 113 LPKSLKKTKMVQWMRERAHEAGLRPVDVLLTSGKKPQEMQELLDTIEKYREGRDVYVVGV 172
Query: 281 ANVGKSAFINALLKK-MGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS IN ++++ +G +D S PGTTL I+I G L DTP
Sbjct: 173 TNVGKSTLINQIIQQTVGVQDVITT---------SQFPGTTLDKIEI-PLDDGHFLIDTP 222
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + +DL +APQ ++ + + + +E T+F GGL R
Sbjct: 223 GIIHRHQMAHYLGKKDLKIIAPQKEIKPKVYQLNAEQ--------------TLFLGGLAR 268
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D ++ ++ Y L+++ T AD FY+K +G L PP + AE + L
Sbjct: 269 FDYVQG-AKSSFIAYVSNDLKLHRTKTATADAFYEKHVGGLLQPPRADEVAE-FPEL--- 323
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV-EP 488
++FE + + +D+ +GLGWI+V EP
Sbjct: 324 ----VRFEFSVKEKTDIVFAGLGWITVTEP 349
>gi|395242556|ref|ZP_10419553.1| Ribosome biogenesis GTPase YqeH [Lactobacillus pasteurii CRBIP
24.76]
gi|394480288|emb|CCI85793.1| Ribosome biogenesis GTPase YqeH [Lactobacillus pasteurii CRBIP
24.76]
Length = 369
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 126/386 (32%), Positives = 183/386 (47%), Gaps = 46/386 (11%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG+ LQ+ + GY+ P + K + V C RC L H + I V N
Sbjct: 7 CIGCGSRLQSEDVTKAGYL-PASALKKAIEDERADVYCQRCFRLRHYNEIMPVELNN--- 62
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
D+ L+ L +KALIV +VD+ DF+ S L ++ G N ILV K DL
Sbjct: 63 --------DDFLNLLNSLANKKALIVNVVDLFDFSNSILTSLKRFVGDNDFILVGNKFDL 114
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
PK + + + DW+ + + L V L S+ + + + K RDVY +G+
Sbjct: 115 FPKNSRQSRIKDWMRQEANRMGLYPKEVFLISAAKQKYLDELIEYLNKASTDRDVYFVGT 174
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS INA++ KMG+ K S PGTTL I+I G L DTPG
Sbjct: 175 TNVGKSTLINAIIDKMGD--------IKDLITTSRFPGTTLDRIEI-PLDNGHFLVDTPG 225
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ ++ A + A+DL ++P+ L+ ++ + L G T+F GGL RI
Sbjct: 226 IMTKNQLATYLDAKDLALVSPKKPLKPATYQL--------------LPGNTLFLGGLGRI 271
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D +K T T Y P+ + V+ +KADEFYQK G LTPP + KG +
Sbjct: 272 DYVKG-ESTSFTVYVPREVYVHRTKLEKADEFYQKHFGEMLTPPKTTKDLPEMKGKE--- 327
Query: 461 LLEIKFEDTERPASDVAISGLGWISV 486
F+ T + SD+ G+G+I+V
Sbjct: 328 -----FKTTYK--SDLLFGGIGFITV 346
>gi|333905648|ref|YP_004479519.1| GTP-binding protein [Streptococcus parauberis KCTC 11537]
gi|333120913|gb|AEF25847.1| GTP-binding protein [Streptococcus parauberis KCTC 11537]
gi|457096140|gb|EMG26611.1| GTP-binding protein [Streptococcus parauberis KRS-02083]
Length = 372
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 123/396 (31%), Positives = 191/396 (48%), Gaps = 53/396 (13%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG +QT + GY KK + + C RC L H + IT V
Sbjct: 6 CIGCGINIQTENKEQAGYTPTGAL---KKGLETGELYCQRCFRLRHYNEITDVN------ 56
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
+S +E + L + AL++ ++DI DFNGS + + N ++LV K+D+
Sbjct: 57 -----ISDEEFLKLLHEVGDSDALVINVIDIFDFNGSVIPGLSRFVSGNDVLLVGNKMDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK V W+ E ++ L L V LTS+++ I + +I + +KGRDVY++G
Sbjct: 112 LPKSVKEGKVTQWLTERAHEEGLRPLDVILTSAQNNNAIKELIEKINQLRKGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G++D S PGTTL I+I G ++DTP
Sbjct: 172 TNVGKSTLINAIIQEITGDKDIITT---------SRFPGTTLDKIEI-PLDDGTFIFDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ ++ A + A+DL ++P+ ++ +++ + SE T+F GGL R
Sbjct: 222 GIIHRYQMAHFLTAKDLKYISPKKEIKPKTYQLNSEQ--------------TLFLGGLGR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + T Y +L V+ + A EFYQK LG+ LTPP G E + L
Sbjct: 268 FDFISG-DKQGFTAYFDNNLTVHRTKLEGASEFYQKHLGLLLTPP-GPADKEDFPKL--- 322
Query: 460 RLLEIKFEDTERPASDVAISGLGWISVE-----PVR 490
+ E T +D+ SGLGW+ + PVR
Sbjct: 323 ----VPHEFTISDKTDLVFSGLGWLRINGSKDAPVR 354
>gi|421489789|ref|ZP_15937165.1| ribosome biogenesis GTPase YqeH [Streptococcus anginosus SK1138]
gi|400374377|gb|EJP27296.1| ribosome biogenesis GTPase YqeH [Streptococcus anginosus SK1138]
Length = 368
Score = 171 bits (434), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 124/387 (32%), Positives = 189/387 (48%), Gaps = 48/387 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGAP+QT D GY E K + + C RC L H + IT V
Sbjct: 6 CIGCGAPIQTKYKDRLGYTPQSALE---KGMETGELYCQRCFRLRHYNEITDV------- 55
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
Q D LR L + AL+V +VDI DFNGS + + N ++LV K D+
Sbjct: 56 ---QLTDDDFLR-LLHEVGDSNALVVNVVDIFDFNGSVIPGLPRFVAGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + V W+ E ++ L + V LTS+++ I + +I++ +KGRDVY++G
Sbjct: 112 LPKSVKTSKVAQWLTERAHEEGLRPVDVVLTSAQNKQAIKELIEKIEQYRKGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G+++ S PGTTL I+I G +YDTP
Sbjct: 172 TNVGKSTLINAIIQEITGDKEIITT---------SRFPGTTLDKIEI-PLADGSHIYDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + A++L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQIAHYLSAKNLKYVSPKKEIKPKTYQLNPEQ--------------TLFLGGLGR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + T Y L+++ A EFY+K +G L PP K+ A+ + + E
Sbjct: 268 FDFVSG-DKQGFTAYFDNELKLHRSKLLGAGEFYEKHVGSLLAPPSKKEVADFPQLVKHE 326
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
+E K +DV SGLGWI V
Sbjct: 327 LKIETK--------TDVVFSGLGWIRV 345
>gi|422881687|ref|ZP_16928143.1| GTP-binding protein [Streptococcus sanguinis SK355]
gi|332363929|gb|EGJ41708.1| GTP-binding protein [Streptococcus sanguinis SK355]
Length = 368
Score = 171 bits (434), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 125/392 (31%), Positives = 190/392 (48%), Gaps = 49/392 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT + GY E K + + C RC L H + I+ V
Sbjct: 6 CIGCGATIQTEDKGKLGYTPQSALE---KGLETGELYCQRCFRLRHYNEISDV------- 55
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
Q D LR L + AL+V +VDI DFNGS + + N ++LV K D+
Sbjct: 56 ---QLTDDDFLR-LLHEVGDSDALVVNVVDIFDFNGSVIPGLPRFIAGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + V W+ E ++ L + V LTS+++ I + +I+ +KGRDVY++G
Sbjct: 112 LPKSVKDSKVTQWLTERAHEEGLRPVDVVLTSAQNKQAIKDLIDKIEHCRKGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G++D S PGTTL I+I G +YDTP
Sbjct: 172 TNVGKSTLINAIIQEITGDKDIITT---------SRFPGTTLDKIEI-PLADGSHIYDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + A +L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLSANNLKYISPKKEIKPKTYQLNPEQ--------------TLFLGGLGR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + T Y L+++ + A FY K +G L PP+GK+K E + L
Sbjct: 268 FDFV-AGDKQGFTAYFDNELKLHRTKLEGASGFYDKHVGSLLVPPVGKEKEE-FPAL--- 322
Query: 460 RLLEIKFEDTERPASDVAISGLGWISVE-PVR 490
+K E T + +D+ SGLGWI V P R
Sbjct: 323 ----VKHEFTIKDKTDIVFSGLGWIRVSGPAR 350
>gi|377556235|ref|ZP_09785950.1| Ribosome biogenesis GTPase YqeH [Lactobacillus gastricus PS3]
gi|376168658|gb|EHS87406.1| Ribosome biogenesis GTPase YqeH [Lactobacillus gastricus PS3]
Length = 372
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 122/387 (31%), Positives = 184/387 (47%), Gaps = 48/387 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +Q+ D GY + K + + C RC L H + I V
Sbjct: 10 CIGCGAVIQSDHPDELGYTPASAVQ---KGLESGELYCQRCFRLRHYNEIAPVS------ 60
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ LSH+R K+LIV +VDI D NGS + + G NP++LV K DL
Sbjct: 61 -----LTDDDFLRLLSHIRDTKSLIVYVVDIFDVNGSLIPGLHRFVGDNPVMLVGNKEDL 115
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LP N + DW+ + + + +S L S+K I + EI + + RDVY++G
Sbjct: 116 LPSSLRRNKLRDWLRQQVNQAGIRPISTVLVSAKKNHQIEDLLKEIDRRRNDRDVYVVGV 175
Query: 281 ANVGKSAFINALLK-KMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS IN ++K + G +D S PGTTL I+I G +L DTP
Sbjct: 176 TNVGKSTLINQIIKLRTGIKDLITT---------SRFPGTTLDQIEI-PLDDGHQLVDTP 225
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ + A V+ A+DL + PQ ++ +++ + + TIF GG+ R
Sbjct: 226 GIIHQAQMAHVLPAKDLKVVTPQKEIKPRTYQLQDQQ--------------TIFLGGVAR 271
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D LK P+ + Y +L ++ AD+FY K LG LTPP A+ + L+R
Sbjct: 272 FDYLKG-PKVGIVGYFDNNLPMHRTKLAHADDFYHKHLGGLLTPPSTDDLAD-FPPLER- 328
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
+E + SD+ GLGW+++
Sbjct: 329 ------YEFAIKQKSDLVFEGLGWMTI 349
>gi|422824158|ref|ZP_16872346.1| GTP-binding protein [Streptococcus sanguinis SK405]
gi|422856095|ref|ZP_16902753.1| GTP-binding protein [Streptococcus sanguinis SK1]
gi|422866065|ref|ZP_16912690.1| GTP-binding protein [Streptococcus sanguinis SK1058]
gi|324993485|gb|EGC25405.1| GTP-binding protein [Streptococcus sanguinis SK405]
gi|327461756|gb|EGF08087.1| GTP-binding protein [Streptococcus sanguinis SK1]
gi|327489041|gb|EGF20836.1| GTP-binding protein [Streptococcus sanguinis SK1058]
Length = 368
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 125/392 (31%), Positives = 193/392 (49%), Gaps = 49/392 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT + GY E K + + C RC L H + I+ V
Sbjct: 6 CIGCGATIQTEDKGKLGYTPQSALE---KGLETGELYCQRCFRLRHYNEISDV------- 55
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
Q D LR L + AL+V +VDI DFNGS + + N ++LV K D+
Sbjct: 56 ---QLTDDDFLR-LLHEVGDSDALVVNVVDIFDFNGSVIPGLPRFVAGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + V W+ E ++ L + V LTS+++ I + +I+ +KGRDVY++G
Sbjct: 112 LPKSVKDSKVTQWLTERAHEEGLRPVDVVLTSAQNKQAIKDLIDKIEYCRKGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G++D S PGTTL I+I G +YDTP
Sbjct: 172 TNVGKSTLINAIIQEITGDKDIITT---------SRFPGTTLDKIEI-PLADGSHIYDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + A++L ++P+ ++ +++ + N+ T+F GGL R
Sbjct: 222 GIIHRHQMAHYLTAKNLKYISPKKEIKPKTYQL-----NPNQ---------TLFLGGLGR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + T Y L+++ + A +FY K +G L PP+GK+K E + L
Sbjct: 268 FDFV-AGDKQGFTAYFDNELKLHRTKLEGASDFYDKHVGSLLVPPVGKEKEE-FPAL--- 322
Query: 460 RLLEIKFEDTERPASDVAISGLGWISVE-PVR 490
+K E T + +D+ SGLGWI V P R
Sbjct: 323 ----VKHEFTIKDKTDIVFSGLGWIRVSGPAR 350
>gi|422853681|ref|ZP_16900345.1| GTP-binding protein [Streptococcus sanguinis SK160]
gi|325696992|gb|EGD38879.1| GTP-binding protein [Streptococcus sanguinis SK160]
Length = 368
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 125/392 (31%), Positives = 193/392 (49%), Gaps = 49/392 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT + GY E K + + C RC L H + I+ V
Sbjct: 6 CIGCGATIQTEDKGKLGYTPQSALE---KGLETGELYCQRCFRLRHYNEISDV------- 55
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
Q D LR L + AL+V +VDI DFNGS + + N ++LV K D+
Sbjct: 56 ---QLTDDDFLR-LLHEVGDSDALVVNVVDIFDFNGSVIPGLPRFVAGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + V W+ E ++ L + V LTS+++ I + +I+ +KGRDVY++G
Sbjct: 112 LPKSVKDSKVTQWLTERAHEEGLRPVDVVLTSAQNKQAIKDLIDKIEYCRKGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G++D S PGTTL I+I G +YDTP
Sbjct: 172 TNVGKSTLINAIIQEITGDKDIITT---------SRFPGTTLDKIEI-PLADGSHIYDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + A++L ++P+ ++ +++ + N+ T+F GGL R
Sbjct: 222 GIIHRHQMAHYLTAKNLKYISPKKEIKPKTYQL-----NPNQ---------TLFLGGLGR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + T Y L+++ + A +FY K +G L PP+GK+K E + L
Sbjct: 268 FDFV-AGDKQGFTAYFDNELKLHRTKLEGASDFYDKHVGSLLVPPVGKEKEE-FPAL--- 322
Query: 460 RLLEIKFEDTERPASDVAISGLGWISVE-PVR 490
+K E T + +D+ SGLGWI V P R
Sbjct: 323 ----VKHEFTIKDKTDIVFSGLGWIRVSGPAR 350
>gi|257869176|ref|ZP_05648829.1| GTP-binding protein YqeH [Enterococcus gallinarum EG2]
gi|357050059|ref|ZP_09111271.1| hypothetical protein HMPREF9478_01254 [Enterococcus saccharolyticus
30_1]
gi|257803340|gb|EEV32162.1| GTP-binding protein YqeH [Enterococcus gallinarum EG2]
gi|355382229|gb|EHG29330.1| hypothetical protein HMPREF9478_01254 [Enterococcus saccharolyticus
30_1]
Length = 370
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 124/393 (31%), Positives = 189/393 (48%), Gaps = 46/393 (11%)
Query: 94 VNSAVASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAV 153
+N + C GCGA +QT GY E K + V C RC L H + I V
Sbjct: 1 MNEEMIHCIGCGALIQTENPTELGYTPLSALE---KGLETGEVYCQRCFRLRHYNEIQDV 57
Query: 154 GGNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIIL 213
++ D+ L+ L ++ ALIV +VDI DFNGS + + G NP++L
Sbjct: 58 S-----------LTDDDFLRLLNELGQKDALIVNVVDIFDFNGSLIPGLHRFVGDNPVLL 106
Query: 214 VVTKVDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGR 273
V KVD+LPK + + W+ E + L + V LTS+K A + + I ++GR
Sbjct: 107 VGNKVDILPKSLKKSKMTQWMRERAHEAGLRPIDVLLTSAKKAAEMTELLQAIDHYREGR 166
Query: 274 DVYILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGG 333
DVY++G NVGKS IN ++K+ A Q+ S PGTTL I+I G
Sbjct: 167 DVYVVGVTNVGKSTLINQIIKQ-------TAGVQEL-ITTSRFPGTTLDKIEI-PLDDGH 217
Query: 334 KLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIF 393
L DTPG+ H+ A + +DL +AP ++ +S+ + + G T+F
Sbjct: 218 FLIDTPGIIHRHQMAHYLGKKDLKIVAPNKEIKPKSYQLNA--------------GQTLF 263
Query: 394 WGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGW 453
+GG+ R D ++ + Y + ++ +KAD FYQK +G L PP + A
Sbjct: 264 FGGVARFDFIQG-ERSSFIAYVANDVVLHRTKLEKADAFYQKHVGGLLQPPRPDELA--- 319
Query: 454 KGLDRERLLEIKFEDTERPASDVAISGLGWISV 486
D L ++FE + + +D+ +GLGWI+V
Sbjct: 320 ---DFPEL--VRFEFSIKEKTDIVFAGLGWITV 347
>gi|422738398|ref|ZP_16793595.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX2141]
gi|315145751|gb|EFT89767.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX2141]
Length = 369
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 129/390 (33%), Positives = 188/390 (48%), Gaps = 49/390 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT GY +E K + V C RC L H + I V
Sbjct: 7 CIGCGAIIQTENPHELGYTPKTAFE---KGMETGEVYCQRCFRLRHYNDIQDV------- 56
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
Q D LR L+ L E ALIV +VDI DFNGS + + G NP++LV KVD+
Sbjct: 57 ---QLTDDDFLR-LLNGLGTEDALIVNVVDIFDFNGSLIPGLHRFIGDNPVLLVGNKVDI 112
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W+ E + L + V LTS K + + I+K ++GRDVY++G
Sbjct: 113 LPKSLKKTKMVQWMRERAHEAGLRPVDVLLTSGKKPQEMQELLDTIEKYREGRDVYVVGV 172
Query: 281 ANVGKSAFINALLKK-MGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS IN ++++ +G +D S PGTTL I+I G L DTP
Sbjct: 173 TNVGKSTLINQIIQQTVGVQDVITT---------SQFPGTTLDKIEI-PLDDGHFLIDTP 222
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + +DL +APQ ++ + + + +E T+F GGL R
Sbjct: 223 GIIHRHQMAHYLGKKDLKIIAPQKEIKPKVYQLNAEQ--------------TLFLGGLAR 268
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D ++ ++ Y L ++ T AD FY+K +G L PP + AE + L
Sbjct: 269 FDYVQG-AKSSFIAYVSNDLNLHRTKTATADAFYEKHVGGLLQPPRADEVAE-FPEL--- 323
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV-EP 488
++FE + + +D+ +GLGWI+V EP
Sbjct: 324 ----VRFEFSVKEKTDIVFAGLGWITVTEP 349
>gi|161507853|ref|YP_001577817.1| GTP-binding protein YqeH [Lactobacillus helveticus DPC 4571]
gi|160348842|gb|ABX27516.1| GTP-binding protein [Lactobacillus helveticus DPC 4571]
Length = 369
Score = 171 bits (434), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 122/386 (31%), Positives = 182/386 (47%), Gaps = 46/386 (11%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA LQ+ + GY+ E K K+ + V C RC L H + I V N
Sbjct: 7 CIGCGAVLQSDDPQKAGYLPKSALE-KAKNEENTDVYCQRCFKLRHYNEIMPVDLNN--- 62
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
D+ L+ L +KALIV +VD+ DF+ S L+ ++ G N ILV K DL
Sbjct: 63 --------DDFLALLNSLAEKKALIVNVVDLFDFSNSLLSSLKRFVGNNDFILVGNKFDL 114
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
PK + + + DW+ + + L + L S+K + + S I + + +DVY +G+
Sbjct: 115 FPKNSKQSKIKDWMRQEANRMGLYPKDIFLVSAKKKLNLESLISYINDQSQDKDVYFVGT 174
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS INA++ MG+ S PGTTL I+I G L DTPG
Sbjct: 175 TNVGKSTLINAIIDMMGDIQNLIT--------TSRFPGTTLDQIEI-PLENGHFLIDTPG 225
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ ++ A ++A+DL ++P+ L+ ++ + L G T+F GL RI
Sbjct: 226 IMTDNQLATHLNAKDLELISPKKPLKPATYQL--------------LPGNTLFLAGLGRI 271
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D LK T T Y +++ V+ T AD FY+K G L PP + KG +E
Sbjct: 272 DYLKG-ESTSFTIYVARNMYVHRTKTTNADAFYEKHKGELLAPPSPDDQMAPLKG--KEF 328
Query: 461 LLEIKFEDTERPASDVAISGLGWISV 486
E K SD+ G+G+++V
Sbjct: 329 KTEFK--------SDLLFGGIGFVTV 346
>gi|422863178|ref|ZP_16909810.1| GTP-binding protein [Streptococcus sanguinis SK408]
gi|327473478|gb|EGF18898.1| GTP-binding protein [Streptococcus sanguinis SK408]
Length = 368
Score = 171 bits (433), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 125/392 (31%), Positives = 193/392 (49%), Gaps = 49/392 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT + GY E K + + C RC L H + I+ V
Sbjct: 6 CIGCGATIQTEDKGKLGYTPQSALE---KGLETGELYCQRCFRLRHYNEISDV------- 55
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
Q D LR L + AL+V +VDI DFNGS + + N ++LV K D+
Sbjct: 56 ---QLTDDDFLR-LLHEVGDSDALVVNVVDIFDFNGSVIPGLPRFVAGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + V W+ E ++ L + V LTS+++ I + +I+ +KGRDVY++G
Sbjct: 112 LPKSVKDSKVTQWLTERAHEEGLRPVDVVLTSAQNKQAIKDLIDKIEYCRKGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G++D S PGTTL I+I G +YDTP
Sbjct: 172 TNVGKSTLINAIIQEITGDKDIITT---------SHFPGTTLDKIEI-PLADGSHIYDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + A++L ++P+ ++ +++ + N+ T+F GGL R
Sbjct: 222 GIIHRHQMAHYLTAKNLKYISPKKEIKPKTYQL-----NPNQ---------TLFLGGLGR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + T Y L+++ + A +FY K +G L PP+GK+K E + L
Sbjct: 268 FDFV-AGDKQGFTAYFDNELKLHRTKLEGASDFYDKHVGSLLVPPVGKEKEE-FPAL--- 322
Query: 460 RLLEIKFEDTERPASDVAISGLGWISVE-PVR 490
+K E T + +D+ SGLGWI V P R
Sbjct: 323 ----VKHEFTIKDKTDIVFSGLGWIRVSGPAR 350
>gi|331266921|ref|YP_004326551.1| GTP-binding protein [Streptococcus oralis Uo5]
gi|326683593|emb|CBZ01211.1| GTP-binding protein [Streptococcus oralis Uo5]
Length = 368
Score = 171 bits (433), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 127/426 (29%), Positives = 202/426 (47%), Gaps = 65/426 (15%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT++ G+ E K + V C RC L H + IT V
Sbjct: 6 CIGCGATIQTTDKAGLGFTPQSALE---KGLETGEVYCQRCFRLRHYNEITDVQ------ 56
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ + L + AL+V ++DI DFNGS + + N ++LV K D+
Sbjct: 57 -----LTDDDFLKLLHEVGDSDALVVNVIDIFDFNGSVIPGLPRFVSGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W++E ++ L + V LTS+++ I V +I+ +KGRDVY++G
Sbjct: 112 LPKSVKPGKISQWLMERAHEEGLRPVDVVLTSAQNKHAIKEVIDKIEHYRKGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G++D S PGTTL I+I G +YDTP
Sbjct: 172 TNVGKSTLINAIIQEITGDQDVITT---------SRFPGTTLDKIEI-PLDDGAYIYDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + A++L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLTAKNLKYVSPKKEIKPKTYQLNPEQ--------------TLFLGGLGR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + F+ L+++ + A FY K LG LTPP K+K D
Sbjct: 268 FDFISGEKQGFTAFF-DNELKLHRTKLEGASAFYNKHLGTLLTPPNSKEKE------DFP 320
Query: 460 RLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVEV 519
+L++ F T + +D+ ISGLGWI V +G +AV P+ V V
Sbjct: 321 KLVQHVF--TIKDKTDLVISGLGWIRV-----------------TGSAKVAVWAPEGVAV 361
Query: 520 FVRNPM 525
R +
Sbjct: 362 VTRKAI 367
>gi|423598348|ref|ZP_17574348.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VD078]
gi|401236618|gb|EJR43075.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VD078]
Length = 368
Score = 171 bits (433), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 123/425 (28%), Positives = 192/425 (45%), Gaps = 64/425 (15%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG +QT + GY + E ++ V+C RC L H + I V
Sbjct: 7 CIGCGVEIQTENKNEVGYAPVSSLEKEQ-------VICQRCFRLKHYNEIQDVS------ 53
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ L+ + + AL+VK+VDI DFNGS+L + G N ++LV K DL
Sbjct: 54 -----LTDDDFLRILNGIGQSDALVVKIVDIFDFNGSWLPGLHRFVGNNKVLLVGNKADL 108
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
+PK + V W+ + + L V L S+ GI +A I+ ++G+DVY++G
Sbjct: 109 IPKSVKHDKVKHWMRYSAKQLGLKPEDVFLISAAKGQGIAELADAIEHYREGKDVYVVGC 168
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS FIN ++K+ + + PGTTL I I LYDTPG
Sbjct: 169 TNVGKSTFINRMIKEFSDETENVITTSHF-------PGTTLDLIDI-PLDETSSLYDTPG 220
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ HH+ A V + L + P + ++ F + E T+F+GGL R
Sbjct: 221 IINHHQMAHYVGKQSLKLITPTTEVKPMVFQLNEEQ--------------TLFFGGLARF 266
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D + T + L ++ +KADE ++K G L PP ++ + +
Sbjct: 267 DYVSG-GRRAFTCHFSNRLTIHRTKLEKADELHEKHAGELLNPPTPEELE------NMPK 319
Query: 461 LLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVEVF 520
++ +F + P +DV SGLGW++V + SG + HVPK V V
Sbjct: 320 FVKYEF-NIREPKTDVVFSGLGWVTV---------------NESGA-KIVAHVPKGVSVS 362
Query: 521 VRNPM 525
+R +
Sbjct: 363 LRKSL 367
>gi|354582184|ref|ZP_09001086.1| ribosome biogenesis GTPase YqeH [Paenibacillus lactis 154]
gi|353199583|gb|EHB65045.1| ribosome biogenesis GTPase YqeH [Paenibacillus lactis 154]
Length = 374
Score = 171 bits (433), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 129/431 (29%), Positives = 200/431 (46%), Gaps = 63/431 (14%)
Query: 92 LKVNSAVASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMIT 151
L + C GCG LQ+ D PGY L +K + V+C RC + + + +
Sbjct: 3 LPTGEDIKKCSGCGIRLQSEAQDQPGY-------LPEKAWERDPVICQRCFRIKNYNEAS 55
Query: 152 AVGGNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPI 211
+V V DE L + + AL++ +VD+ DF GS ++ ++ G NP+
Sbjct: 56 SVA-----------VDQDEFLRLLGQIGGKNALVIHIVDLFDFEGSLISGLQRFVGNNPV 104
Query: 212 ILVVTKVDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKK 271
IL V K DLLPK T++N V +WV + + L + L S+K G + + +
Sbjct: 105 ILAVNKTDLLPKVTNWNKVLNWVQKQCKEHGLKTEDIVLCSAKKNQGFERLLETVAYHRG 164
Query: 272 GRDVYILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLG 331
RDVY++G+ NVGKS+ IN L++ + + S PGTTL + I
Sbjct: 165 DRDVYVVGATNVGKSSLINRLIRDYSDLEQELTT--------SRYPGTTLDMVHI-PLDD 215
Query: 332 GGKLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFT 391
G + DTPG+ R + +V EDL + P++ L+ + + NE G T
Sbjct: 216 GRDIIDTPGIVYPWRYSEIVSREDLREVMPENPLKPAVYQL-------NE-------GQT 261
Query: 392 IFWGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAE 451
+F+GG R D ++ + ++ F + L ++ ++AD +++ G L+PP + AE
Sbjct: 262 LFFGGFARFDFVQGVHQSFTCFISGR-LNIHRTKLERADTLFEEHAGELLSPPTRDRLAE 320
Query: 452 GWKGLDRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAV 511
L EI+ R +DV ISGLGWI V N D G L +AV
Sbjct: 321 ----LPEWTRHEIRIPKGSR--TDVFISGLGWIKV--------NGD------QGAL-VAV 359
Query: 512 HVPKPVEVFVR 522
H PK V+V R
Sbjct: 360 HAPKGVKVLAR 370
>gi|322516195|ref|ZP_08069128.1| GTP-binding protein [Streptococcus vestibularis ATCC 49124]
gi|322125371|gb|EFX96726.1| GTP-binding protein [Streptococcus vestibularis ATCC 49124]
Length = 372
Score = 171 bits (433), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 118/388 (30%), Positives = 190/388 (48%), Gaps = 48/388 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT + + G+ + KK + + C RC L H + I V
Sbjct: 6 CIGCGAQIQTEDKEKAGFTPASSI---KKAEETGELYCQRCFRLRHYNEIVDV------- 55
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ DE + L + AL+V +VDI DFNGS + + N ++LV K D+
Sbjct: 56 ----HITDDEFLKLLHEVGDSDALVVNVVDIFDFNGSIIPGLSRFVSGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK V W+ E ++ + + V LTS+++ I + I+K +KGRDVY++G
Sbjct: 112 LPKSVKDGKVTQWLTERAHEEGMRPVDVMLTSAQNHHAIKELIQRIEKLRKGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA++K++ G++D S PGTTL I+I G ++DTP
Sbjct: 172 TNVGKSTLINAIIKEITGDKDIITT---------SRFPGTTLDKIEI-PLDDGTYIFDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + A+DL ++P+ ++ +++ + + T+F GGL R
Sbjct: 222 GIIHRHQMAHYLSAKDLKYVSPKKEIKPKTYQLNASQ--------------TLFLGGLGR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + F+ +L+++ + AD FY K +G L PP K A D
Sbjct: 268 FDFIDGDKQGFTAFF-DNNLKLHRTKLEGADAFYDKHVGSLLMPPGPKDLA------DFP 320
Query: 460 RLLEIKFEDTERPASDVAISGLGWISVE 487
+L+ +F T + +D+ SGLGWI V+
Sbjct: 321 KLVRHEF--TIKDKTDIVFSGLGWIRVQ 346
>gi|365904269|ref|ZP_09442028.1| GTPase YqeH [Lactobacillus versmoldensis KCTC 3814]
Length = 371
Score = 171 bits (433), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 132/432 (30%), Positives = 204/432 (47%), Gaps = 66/432 (15%)
Query: 95 NSAVASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVG 154
N+ C GCGA +QT+ D PGYV P T + K K +LC RC L + + IT V
Sbjct: 4 NNEALYCIGCGAKIQTNNPDGPGYVQPSTLK-KYLADDSKELLCKRCFRLRNYNEITDVD 62
Query: 155 GNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILV 214
+ D+ + L + +K LIV +VDI D+ GS + ++ G I++V
Sbjct: 63 -----------IDDDDFLKLLDSISSQKGLIVNVVDIFDYEGSVIPGLQRFVGDKNILIV 111
Query: 215 VTKVDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRD 274
KVDLLP + N + +W+ + + + + + + S+++ I + + I+K ++G+D
Sbjct: 112 GNKVDLLPHSVNQNKLLNWIQQKSKENGIKSVDQIMVSAQTGTNIDKLMTMIEKYRQGQD 171
Query: 275 VYILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGK 334
VY++G+ N GKS IN ++ +A K S PGTTL QID L G
Sbjct: 172 VYVVGTTNTGKSTLINRII--------SANSDVKDLITTSRFPGTTLD--QIDIPLDDGH 221
Query: 335 -LYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIF 393
L DTPG+ ++ A + ++L A+ P+ +LR +F + +G TIF
Sbjct: 222 FLIDTPGIIHKYQLAHYLDEKELKAITPKKQLRPSTFQL--------------RDGQTIF 267
Query: 394 WGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGW 453
GL R D L +T + FY + L ++ T ADEFYQK LG L PP +
Sbjct: 268 VAGLARFDFLD--EKTNVVFYFNQGLVLHRTKTVNADEFYQKHLGEILNPPY---DVTEF 322
Query: 454 KGLDRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHV 513
L +E E T SD+ I GLGW+++ + VHV
Sbjct: 323 PKLHQE-------EFTSHRKSDIVIYGLGWVTI-----------------PANCKVLVHV 358
Query: 514 PKPVEVFVRNPM 525
P+ V V +R+ +
Sbjct: 359 PEGVRVAMRDAI 370
>gi|229163284|ref|ZP_04291238.1| hypothetical protein bcere0009_40520 [Bacillus cereus R309803]
gi|228620191|gb|EEK77063.1| hypothetical protein bcere0009_40520 [Bacillus cereus R309803]
Length = 368
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 125/426 (29%), Positives = 190/426 (44%), Gaps = 66/426 (15%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG +QT + GY + E ++ V+C RC L H + I V
Sbjct: 7 CIGCGVEIQTENKNEVGYAPTSSLEKEQ-------VICQRCFRLKHYNEIQDVS------ 53
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ L+ + + AL+VK+VDI DFNGS+L + G N ++LV K DL
Sbjct: 54 -----LTDDDFLRILNGIGKSDALVVKIVDIFDFNGSWLPGLHRFVGNNKVLLVGNKADL 108
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
+PK + V W+ + + L V L S+ GI +A I+ + G+DVY++G
Sbjct: 109 IPKSVKHDKVKHWMRYSAKQLGLKPEDVFLISAAKGQGIAELADAIEYYRGGKDVYVVGC 168
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS FIN ++K+ + + PGTTL I I LYDTPG
Sbjct: 169 TNVGKSTFINRMIKEFSDETENVITTSHF-------PGTTLDLIDI-PLDEESSLYDTPG 220
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ HH+ A V E L + P ++ F + E T+F+ GL R
Sbjct: 221 IINHHQMAHYVGKESLKLITPTKEIKPMVFQLNEEQ--------------TLFFSGLARF 266
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D + T + L ++ +KADE Y+ G L+PP ++ A +
Sbjct: 267 DYVSG-GRRAFTCHFSNRLTIHRTKLEKADELYKNHAGDLLSPPTPEELA------NIPE 319
Query: 461 LLEIKFEDTERPASDVAISGLGWISV-EPVRRSIRNSDINLESTSGELHLAVHVPKPVEV 519
L++ +F + P +DV SGLGW++V EP + + HVPK V V
Sbjct: 320 LVKYEF-NIREPKTDVVFSGLGWVTVNEPGAK-----------------IVAHVPKGVSV 361
Query: 520 FVRNPM 525
+R +
Sbjct: 362 SLRKSL 367
>gi|422825769|ref|ZP_16873948.1| GTP-binding protein [Streptococcus sanguinis SK678]
gi|324995205|gb|EGC27117.1| GTP-binding protein [Streptococcus sanguinis SK678]
Length = 368
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 124/392 (31%), Positives = 190/392 (48%), Gaps = 49/392 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT + GY E K + + C RC L H + I+ V
Sbjct: 6 CIGCGATIQTEDKGKLGYTPQSALE---KGLETGELYCQRCFRLRHYNEISDV------- 55
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
Q D LR L + AL+V +VDI DFNGS + + N ++LV K D+
Sbjct: 56 ---QLTDDDFLR-LLHEVGDSDALVVNVVDIFDFNGSVIPGLPRFVAGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK V W+ E ++ L + V LTS+++ I + +I+ +KGRDVY++G
Sbjct: 112 LPKSVKDGKVTQWLTERAHEEGLRPVDVVLTSAQNKQAIKDLIDKIEHCRKGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G++D S PGTTL I+I G +YDTP
Sbjct: 172 TNVGKSTLINAIIQEITGDKDIITT---------SRFPGTTLDKIEI-PLADGSHIYDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + A++L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLSAKNLKYVSPKKEIKPKTYQLNPEQ--------------TLFLGGLGR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + T Y L+++ + A +FY K +G L PP+GK+K E + L
Sbjct: 268 FDFV-AGDKQGFTAYFDNELKLHRTKLEGASDFYDKHVGSLLVPPVGKEKEE-FPAL--- 322
Query: 460 RLLEIKFEDTERPASDVAISGLGWISVE-PVR 490
+K E + +D+ SGLGWI V P R
Sbjct: 323 ----VKHEFIIKDKTDIVFSGLGWIRVSGPAR 350
>gi|403514618|ref|YP_006655438.1| GTPase YqeH [Lactobacillus helveticus R0052]
gi|403080056|gb|AFR21634.1| GTPase YqeH [Lactobacillus helveticus R0052]
Length = 369
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 123/386 (31%), Positives = 182/386 (47%), Gaps = 46/386 (11%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA LQ+ + GY+ E K K+ + V C RC L H + I V N
Sbjct: 7 CIGCGAVLQSDDPQKAGYLPKSALE-KAKNEENTDVYCQRCFKLRHYNEIMPVDLNN--- 62
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
D+ L+ L +KALIV +VD+ DF+ S L+ ++ G N ILV K DL
Sbjct: 63 --------DDFLALLNSLAEKKALIVNVVDLFDFSNSLLSSLKRFVGNNDFILVGNKFDL 114
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
PK + + + DW+ + + L + L S+K + + S I + + +DVY +G+
Sbjct: 115 FPKNSKQSKIKDWMRQEANRMGLYPKDIFLVSAKKKLNLESLISYINDQSQDKDVYFVGT 174
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS INA++ MG S PGTTL I+I G L DTPG
Sbjct: 175 TNVGKSTLINAIIDMMGNIQNLIT--------TSRFPGTTLDQIEI-PLENGHFLIDTPG 225
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ ++ A ++A+DL ++P+ L+ ++ + L G T+F GL RI
Sbjct: 226 IMTDNQLATHLNAKDLELISPKKPLKPATYQL--------------LPGNTLFLVGLGRI 271
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D LK T T Y +++ V+ T AD FY+K G LTPP + KG +E
Sbjct: 272 DYLKG-ESTSFTVYVARNMYVHRTKTTNADAFYEKHKGELLTPPSPDDQMAPLKG--KEF 328
Query: 461 LLEIKFEDTERPASDVAISGLGWISV 486
E K SD+ G+G+++V
Sbjct: 329 KTEFK--------SDLLFGGIGFVTV 346
>gi|357639081|ref|ZP_09136954.1| ribosome biogenesis GTPase YqeH [Streptococcus urinalis 2285-97]
gi|418417147|ref|ZP_12990345.1| ribosome biogenesis GTPase YqeH [Streptococcus urinalis
FB127-CNA-2]
gi|357587535|gb|EHJ56943.1| ribosome biogenesis GTPase YqeH [Streptococcus urinalis 2285-97]
gi|410873203|gb|EKS21139.1| ribosome biogenesis GTPase YqeH [Streptococcus urinalis
FB127-CNA-2]
Length = 370
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 118/389 (30%), Positives = 187/389 (48%), Gaps = 48/389 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT++ + GY E K + + C RC L H + I V
Sbjct: 6 CIGCGAKIQTTDKEKAGYTPKAALE---KGMETGELYCQRCFRLRHYNEIVDVN------ 56
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ DE L + AL+V +VDI DFNGS + + N ++LV K D+
Sbjct: 57 -----ITDDEFLTLLHEVGDSDALVVNVVDIFDFNGSVIPGLSRFISGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK V W+ E ++ + L V LTS+++ I + ++I + +KGRDVY++G
Sbjct: 112 LPKSVKNQKVTQWLTERAHEEGMRPLDVILTSAQNNEAIKELITKINQLRKGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G++D S PGTTL I+I G ++DTP
Sbjct: 172 TNVGKSTLINAIIQEITGDKDVITT---------SRFPGTTLDKIEI-PLDDGSFIFDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + A +L ++P+ ++ +++ + E T+F GL R
Sbjct: 222 GIIHRHQMAHYLGARNLKYISPKKEIKPKTYQLNPEQ--------------TLFLAGLAR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + T Y +L+++ + A FY+K +G L PP K+ +E K
Sbjct: 268 FDFVSG-EKQGFTAYFDNNLKIHRTKLEGATAFYEKHVGHLLVPPTDKELSEFPK----- 321
Query: 460 RLLEIKFEDTERPASDVAISGLGWISVEP 488
I+ E T +D+ SGLGWI V P
Sbjct: 322 ---LIRHEFTIHEKTDIVYSGLGWIRVNP 347
>gi|322388318|ref|ZP_08061922.1| GTP-binding protein [Streptococcus infantis ATCC 700779]
gi|419842394|ref|ZP_14365742.1| ribosome biogenesis GTPase YqeH [Streptococcus infantis ATCC
700779]
gi|321140990|gb|EFX36491.1| GTP-binding protein [Streptococcus infantis ATCC 700779]
gi|385703871|gb|EIG40973.1| ribosome biogenesis GTPase YqeH [Streptococcus infantis ATCC
700779]
Length = 368
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 126/426 (29%), Positives = 203/426 (47%), Gaps = 65/426 (15%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT++ G+ E K + V C RC L H + IT V
Sbjct: 6 CIGCGATIQTTDKTGLGFTPQSALE---KGLETGEVYCQRCFRLRHYNEITDVQ------ 56
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ + L + AL+V ++DI DFNGS + + N ++LV K D+
Sbjct: 57 -----LTDDDFLKLLHEVGDSDALVVNVIDIFDFNGSVIPGLPRFVSGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W++E ++ L ++ V LTS+++ I V +I+ +KGRDVY++G
Sbjct: 112 LPKSVKPGKISQWLMERAHEEGLRLVDVVLTSAQNKHAIKEVIDKIEHYRKGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G+++ S PGTTL I+I G +YDTP
Sbjct: 172 TNVGKSTLINAIIQEITGDQNVITT---------SRFPGTTLDKIEI-PLDDGSYIYDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + A++L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLTAKNLKYVSPKKEIKPKTYQLNPEQ--------------TLFLGGLGR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + F+ L+++ + A FY K LG LTPP K+K D
Sbjct: 268 FDFIAGEKQGFTAFF-DNELKLHRTKLEGASAFYDKHLGTLLTPPNSKEKE------DFP 320
Query: 460 RLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVEV 519
+L++ F T + +D+ ISGLGWI V +G +AV P+ V V
Sbjct: 321 KLVQHVF--TIKDKTDLVISGLGWIRV-----------------TGSAKVAVWAPEGVAV 361
Query: 520 FVRNPM 525
R +
Sbjct: 362 VTRKAI 367
>gi|257087775|ref|ZP_05582136.1| nitric-oxide synthase [Enterococcus faecalis D6]
gi|256995805|gb|EEU83107.1| nitric-oxide synthase [Enterococcus faecalis D6]
Length = 375
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 130/402 (32%), Positives = 195/402 (48%), Gaps = 50/402 (12%)
Query: 89 DKVLKVNSAVASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGH 148
++ +++ A+ C GCGA +QT GY +E K + V C RC L H +
Sbjct: 2 ERRIRMTEAI-HCIGCGAIIQTENPHELGYTPKTAFE---KGMETGEVYCQRCFRLRHYN 57
Query: 149 MITAVGGNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGA 208
I V Q D LR L+ L E ALIV +VDI DFNGS + + G
Sbjct: 58 DIQDV----------QLTDDDFLR-LLNGLGTEDALIVNVVDIFDFNGSLIPGLHRFIGD 106
Query: 209 NPIILVVTKVDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQK 268
NP++LV KVD+LPK + W+ E + L + V LTS K + + I+K
Sbjct: 107 NPVLLVGNKVDILPKSLKKPKMVQWMRERAHEAGLRPVDVLLTSGKKPQEMQELLDTIEK 166
Query: 269 EKKGRDVYILGSANVGKSAFINALLKK-MGERDPAAAMAQKYRPIQSAVPGTTLGPIQID 327
++GRDVY++G NVGKS IN ++++ +G +D S PGTTL I+I
Sbjct: 167 YREGRDVYVVGVTNVGKSTLINQIIQQTVGVQDVITT---------SQFPGTTLDKIEI- 216
Query: 328 AFLGGGKLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGL 387
G L DTPG+ H+ A + +DL +APQ ++ + + + +E
Sbjct: 217 PLDDGHFLIDTPGIIHRHQMAHYLGKKDLKIIAPQKEIKPKVYQLNAEQ----------- 265
Query: 388 NGFTIFWGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGK 447
T+F GGL R D ++ ++ Y L ++ T AD FY+K +G L PP
Sbjct: 266 ---TLFLGGLARFDYVQG-AKSSFIAYVSNDLNLHRTKTATADAFYEKHVGGLLQPPRAD 321
Query: 448 QKAEGWKGLDRERLLEIKFEDTERPASDVAISGLGWISV-EP 488
+ AE + L ++FE + + +D+ +GLGWI+V EP
Sbjct: 322 EVAE-FPEL-------VRFEFSVKEKTDIVFAGLGWITVTEP 355
>gi|421766272|ref|ZP_16203047.1| GTP-binding protein YqeH [Lactococcus garvieae DCC43]
gi|407625279|gb|EKF51990.1| GTP-binding protein YqeH [Lactococcus garvieae DCC43]
Length = 375
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 122/386 (31%), Positives = 183/386 (47%), Gaps = 46/386 (11%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT + +A G++ K + + C RC L H + I V
Sbjct: 13 CIGCGALIQTEDKNALGFLPAGAL---AKRGEDDALYCQRCFRLRHYNEIADVS------ 63
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ LS + ALIV +VDI DFNGS + + G N ++LV K D+
Sbjct: 64 -----LTDDDFLRLLSEIGEHDALIVNVVDIFDFNGSLIPSLHRFTGNNDLLLVANKKDI 118
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LP + W+ E K L L V +TS+K+ + + +I++ +KGRDVY++G
Sbjct: 119 LPHSLKVGKMTAWLKEQAKKAGLRPLDVLVTSAKNQEDVRELMEKIERRRKGRDVYVVGV 178
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS INA++K + D S PGTTL I+I L DTPG
Sbjct: 179 TNVGKSTLINAIIKLVTGDDNVIT--------TSRFPGTTLDKIEI-PLDDDSLLIDTPG 229
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ + A + A+DL ++P+ ++ +++ + + G T+F GGL R
Sbjct: 230 IIHRGQMAHYLEAKDLKLVSPKKEIKPKTYQLNA--------------GQTLFLGGLARF 275
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D +K + LT + L ++ D A EFY+K +G L PP K A K + +E
Sbjct: 276 DYIKG-EKQGLTVFCDNELNIHRTKLDGATEFYEKHVGSLLVPPGAKDLAAFPKLIRKE- 333
Query: 461 LLEIKFEDTERPASDVAISGLGWISV 486
F E+ SD+ SGLGWI V
Sbjct: 334 -----FSVKEK--SDIVFSGLGWIRV 352
>gi|229031986|ref|ZP_04187971.1| hypothetical protein bcere0028_40310 [Bacillus cereus AH1271]
gi|228729341|gb|EEL80333.1| hypothetical protein bcere0028_40310 [Bacillus cereus AH1271]
Length = 368
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 126/426 (29%), Positives = 190/426 (44%), Gaps = 66/426 (15%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG +QT + + GY + E ++ V+C RC L H + I V
Sbjct: 7 CIGCGVEIQTEDKNEVGYAPASSLEKEQ-------VICQRCFRLKHYNEIQDVS------ 53
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ L+ + + AL+VK+VDI DFNGS+L + G N ++LV K DL
Sbjct: 54 -----LTDDDFLRILNGIGKSDALVVKIVDIFDFNGSWLPGLHRFVGNNKVLLVGNKADL 108
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
+PK + V W+ + + L V L S+ GI +A I+ + G+DVY++G
Sbjct: 109 IPKSVKHDKVKHWMRYSAKQLGLKPEDVFLISAAKGQGIAELADAIEYYRGGKDVYVVGC 168
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS FIN ++K+ + + PGTTL I I LYDTPG
Sbjct: 169 TNVGKSTFINRMIKEFSDETENVITTSHF-------PGTTLDLIDI-PLDEESSLYDTPG 220
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ HH+ A V E L + P ++ F + E T+F+ GL R
Sbjct: 221 IINHHQMAHYVGKESLKLITPTKEIKPMVFQLNEEQ--------------TLFFSGLARF 266
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D + T + L ++ +KADE Y+ G L+PP ++ E L
Sbjct: 267 DYVSG-GRRAFTCHFSNRLTIHRTKLEKADELYKNHAGDLLSPPT-PEELENMPDL---- 320
Query: 461 LLEIKFE-DTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVEV 519
+K+E + P +DV SGLGW++V + SG + HVPK V V
Sbjct: 321 ---VKYEFNIREPKTDVVFSGLGWVTV---------------NESGA-KIVAHVPKGVSV 361
Query: 520 FVRNPM 525
+R +
Sbjct: 362 SLRKSL 367
>gi|255971788|ref|ZP_05422374.1| nitric-oxide synthase [Enterococcus faecalis T1]
gi|255974786|ref|ZP_05425372.1| nitric-oxide synthase [Enterococcus faecalis T2]
gi|256958094|ref|ZP_05562265.1| nitric-oxide synthase [Enterococcus faecalis DS5]
gi|256960940|ref|ZP_05565111.1| nitric-oxide synthase [Enterococcus faecalis Merz96]
gi|256963921|ref|ZP_05568092.1| nitric-oxide synthase [Enterococcus faecalis HIP11704]
gi|257079982|ref|ZP_05574343.1| nitric-oxide synthase [Enterococcus faecalis JH1]
gi|257081574|ref|ZP_05575935.1| nitric-oxide synthase [Enterococcus faecalis E1Sol]
gi|257084223|ref|ZP_05578584.1| nitric-oxide synthase [Enterococcus faecalis Fly1]
gi|257091097|ref|ZP_05585458.1| nitric-oxide synthase [Enterococcus faecalis CH188]
gi|257417044|ref|ZP_05594038.1| nitric-oxide synthase [Enterococcus faecalis ARO1/DG]
gi|257420198|ref|ZP_05597192.1| nitric-oxide synthase [Enterococcus faecalis T11]
gi|255962806|gb|EET95282.1| nitric-oxide synthase [Enterococcus faecalis T1]
gi|255967658|gb|EET98280.1| nitric-oxide synthase [Enterococcus faecalis T2]
gi|256948590|gb|EEU65222.1| nitric-oxide synthase [Enterococcus faecalis DS5]
gi|256951436|gb|EEU68068.1| nitric-oxide synthase [Enterococcus faecalis Merz96]
gi|256954417|gb|EEU71049.1| nitric-oxide synthase [Enterococcus faecalis HIP11704]
gi|256988012|gb|EEU75314.1| nitric-oxide synthase [Enterococcus faecalis JH1]
gi|256989604|gb|EEU76906.1| nitric-oxide synthase [Enterococcus faecalis E1Sol]
gi|256992253|gb|EEU79555.1| nitric-oxide synthase [Enterococcus faecalis Fly1]
gi|256999909|gb|EEU86429.1| nitric-oxide synthase [Enterococcus faecalis CH188]
gi|257158872|gb|EEU88832.1| nitric-oxide synthase [Enterococcus faecalis ARO1/DG]
gi|257162026|gb|EEU91986.1| nitric-oxide synthase [Enterococcus faecalis T11]
Length = 375
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 130/402 (32%), Positives = 195/402 (48%), Gaps = 50/402 (12%)
Query: 89 DKVLKVNSAVASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGH 148
++ +++ A+ C GCGA +QT GY +E K + V C RC L H +
Sbjct: 2 ERRIRMTEAI-HCIGCGAIIQTENPHELGYTPKTAFE---KGMETGEVYCQRCFRLRHYN 57
Query: 149 MITAVGGNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGA 208
I V Q D LR L+ L E ALIV +VDI DFNGS + + G
Sbjct: 58 DIQDV----------QLTDDDFLR-LLNGLGTEDALIVNVVDIFDFNGSLIPGLHRFIGD 106
Query: 209 NPIILVVTKVDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQK 268
NP++LV KVD+LPK + W+ E + L + V LTS K + + I+K
Sbjct: 107 NPVLLVGNKVDILPKSLKKPKMVQWMRERAHEAGLRPVDVLLTSGKKPQEMQELLDTIEK 166
Query: 269 EKKGRDVYILGSANVGKSAFINALLKK-MGERDPAAAMAQKYRPIQSAVPGTTLGPIQID 327
++GRDVY++G NVGKS IN ++++ +G +D S PGTTL I+I
Sbjct: 167 YREGRDVYVVGVTNVGKSTLINQIIQQTVGVQDVITT---------SQFPGTTLDKIEI- 216
Query: 328 AFLGGGKLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGL 387
G L DTPG+ H+ A + +DL +APQ ++ + + + +E
Sbjct: 217 PLDDGHFLIDTPGIIHRHQMAHYLGKKDLKIIAPQKEIKPKVYQLNAEQ----------- 265
Query: 388 NGFTIFWGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGK 447
T+F GGL R D ++ ++ Y L ++ T AD FY+K +G L PP
Sbjct: 266 ---TLFLGGLARFDYVQG-AKSSFIAYVSNDLNLHRTKTATADAFYEKHVGGLLQPPRAD 321
Query: 448 QKAEGWKGLDRERLLEIKFEDTERPASDVAISGLGWISV-EP 488
+ AE + L ++FE + + +D+ +GLGWI+V EP
Sbjct: 322 EVAE-FPEL-------VRFEFSVKEKTDIVFAGLGWITVTEP 355
>gi|421276677|ref|ZP_15727498.1| ribosome biogenesis GTPase YqeH [Streptococcus mitis SPAR10]
gi|395876883|gb|EJG87955.1| ribosome biogenesis GTPase YqeH [Streptococcus mitis SPAR10]
Length = 368
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 119/387 (30%), Positives = 192/387 (49%), Gaps = 48/387 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG+ +QT++ G+ E K + V C RC L H + IT V
Sbjct: 6 CIGCGSTIQTTDKTGLGFTPQSALE---KGLETGEVYCQRCFRLRHYNEITDVQ------ 56
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ + L + AL+V ++DI DFNGS + + N +ILV K D+
Sbjct: 57 -----LTDDDFLKLLHEVGDSDALVVNVIDIFDFNGSVIPGLPRFVSGNDVILVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W++E ++ L + V LTS+++ I V +I+ +KGRDVY++G
Sbjct: 112 LPKSVKPGKISQWLMERAHEEGLRPVDVVLTSAQNKHAIKEVIDKIEHYRKGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G+++ S PGTTL I+I G +YDTP
Sbjct: 172 TNVGKSTLINAIIQEITGDQNVITT---------SRFPGTTLDKIEI-PLDDGSYIYDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + A++L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLTAKNLKYVSPKKEIKPKTYQLNPEQ--------------TLFLGGLGR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + F+ L+++ + A +FY K LG LTPP K+K D
Sbjct: 268 FDFIAGEKQGFTAFF-DNELKLHRTKLEGASDFYDKHLGTLLTPPNNKEKE------DFP 320
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
+L++ F T + +D+ ISGLGWI V
Sbjct: 321 KLVQHVF--TIKDKTDLVISGLGWIRV 345
>gi|29377339|ref|NP_816493.1| GTP-binding protein YqeH [Enterococcus faecalis V583]
gi|227554296|ref|ZP_03984343.1| GTP-binding protein [Enterococcus faecalis HH22]
gi|422712679|ref|ZP_16769442.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0309A]
gi|422716477|ref|ZP_16773181.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0309B]
gi|29344806|gb|AAO82563.1| GTPase of unknown function [Enterococcus faecalis V583]
gi|227176586|gb|EEI57558.1| GTP-binding protein [Enterococcus faecalis HH22]
gi|315575232|gb|EFU87423.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0309B]
gi|315582408|gb|EFU94599.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0309A]
Length = 369
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 129/390 (33%), Positives = 189/390 (48%), Gaps = 49/390 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT GY +E K + V C RC L H + I V
Sbjct: 7 CIGCGAIIQTENPHELGYTPKTAFE---KGMETGEVYCQRCFRLRHYNDIQDV------- 56
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
Q D LR L+ L E ALIV +VDI DFNGS + + G NP++LV KVD+
Sbjct: 57 ---QLTDDDFLR-LLNGLGTEDALIVNVVDIFDFNGSLIPGLHRFIGDNPVLLVGNKVDI 112
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W+ E + L + V LTS K + + I+K ++GRDVY++G
Sbjct: 113 LPKSLKKPKMVQWMRERAHEAGLRPVDVLLTSGKKPQEMQELLDTIEKYREGRDVYVVGV 172
Query: 281 ANVGKSAFINALLKK-MGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS IN ++++ +G +D S PGTTL I+I G L DTP
Sbjct: 173 TNVGKSTLINQIIQQTVGVQDVITT---------SQFPGTTLDKIEI-PLDDGHFLIDTP 222
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + +DL +APQ ++ + + + +E T+F GGL R
Sbjct: 223 GIIHRHQMAHYLGKKDLKIIAPQKEIKPKVYQLNAEQ--------------TLFLGGLAR 268
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D ++ ++ Y L+++ T AD FY+K +G L PP + AE + L
Sbjct: 269 FDYVQG-AKSSFIAYVSNDLKLHRTKTATADAFYEKHVGGLLQPPRADEVAE-FPEL--- 323
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV-EP 488
++FE + + +D+ +GLGWI+V EP
Sbjct: 324 ----VRFEFSVKEKTDIVFAGLGWITVTEP 349
>gi|422852211|ref|ZP_16898881.1| GTP-binding protein [Streptococcus sanguinis SK150]
gi|325693537|gb|EGD35456.1| GTP-binding protein [Streptococcus sanguinis SK150]
Length = 368
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 125/392 (31%), Positives = 189/392 (48%), Gaps = 49/392 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT + GY E K + + C RC L H + I+ V
Sbjct: 6 CIGCGATIQTEDKSKLGYTPQSALE---KGLETGELYCQRCFRLRHYNEISDV------- 55
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
Q D LR L + AL+V +VDI DFNGS + + N ++LV K D+
Sbjct: 56 ---QLTDDDFLR-LLHEVGDSDALVVNVVDIFDFNGSVIPGLPRFIAGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + V W+ E ++ L + V LTS+++ I + +I+ +KGRDVY++G
Sbjct: 112 LPKSVKDSKVTQWLTERAHEEGLRPVDVVLTSAQNKQAIKDLIDKIEHCRKGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G++D S PGTTL I+I G +YDTP
Sbjct: 172 TNVGKSTLINAIIQEITGDKDIITT---------SRFPGTTLDKIEI-PLADGSHIYDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + A++L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLSAKNLKYISPKKEIKPKTYQLNPEQ--------------TLFLGGLGR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + T Y L+++ A FY K +G L PP+GK+K E + L
Sbjct: 268 FDFV-AGDKQGFTAYFDNELKLHRTKLQGASGFYDKHVGSLLVPPVGKEKEE-FPAL--- 322
Query: 460 RLLEIKFEDTERPASDVAISGLGWISVE-PVR 490
+K E T + D+ SGLGWI V P R
Sbjct: 323 ----VKHEFTIKDKMDIVFSGLGWIRVSGPAR 350
>gi|422727775|ref|ZP_16784205.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0012]
gi|315151732|gb|EFT95748.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0012]
Length = 369
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 129/390 (33%), Positives = 188/390 (48%), Gaps = 49/390 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT GY +E K + V C RC L H + I V
Sbjct: 7 CIGCGAIIQTENPHELGYTPKTAFE---KGMETGEVYCQRCFRLRHYNDIQDV------- 56
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
Q D LR L+ L E ALIV +VDI DFNGS + + G NP++LV KVD+
Sbjct: 57 ---QLTDDDFLR-LLNGLGTEDALIVNVVDIFDFNGSLIPGLHRFIGDNPVLLVGNKVDI 112
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W+ E + L + V LTS K + + I+K ++GRDVY++G
Sbjct: 113 LPKSLKKPKMVQWMREQAHEAGLRPVDVLLTSGKKPQEMQELLDTIEKYREGRDVYVVGV 172
Query: 281 ANVGKSAFINALLKK-MGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS IN ++++ +G +D S PGTTL I+I G L DTP
Sbjct: 173 TNVGKSTLINQIIQQTVGVQDVITT---------SQFPGTTLDKIEI-PLDDGHFLIDTP 222
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + +DL +APQ ++ + + + +E T+F GGL R
Sbjct: 223 GIIHRHQMAHYLGKKDLKIIAPQKEIKPKVYQLNAEQ--------------TLFLGGLAR 268
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D ++ ++ Y L ++ T AD FY+K +G L PP + AE + L
Sbjct: 269 FDYVQG-AKSSFIAYVSNDLNLHRTKTATADAFYEKHVGGLLQPPRADEVAE-FPEL--- 323
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV-EP 488
++FE + + +D+ +GLGWI+V EP
Sbjct: 324 ----VRFEFSVKEKTDIVFAGLGWITVTEP 349
>gi|229104967|ref|ZP_04235623.1| hypothetical protein bcere0019_41050 [Bacillus cereus Rock3-28]
gi|423615323|ref|ZP_17591157.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VD115]
gi|228678461|gb|EEL32682.1| hypothetical protein bcere0019_41050 [Bacillus cereus Rock3-28]
gi|401261002|gb|EJR67169.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VD115]
Length = 368
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 126/427 (29%), Positives = 190/427 (44%), Gaps = 68/427 (15%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG +QT + GY + E ++ V+C RC L H + I V
Sbjct: 7 CIGCGVEIQTENKNEVGYAPASSLEKEQ-------VICQRCFRLKHYNEIQDVS------ 53
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ L+ + + AL+VK+VDI DFNGS+L + G N ++LV K DL
Sbjct: 54 -----LTDDDFLRILNGIGKSDALVVKIVDIFDFNGSWLPGLHRFVGNNKVLLVGNKADL 108
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
+PK + V W+ + + L V L S+ GI +A I+ + G+DVY++G
Sbjct: 109 IPKSVKHDKVKHWMRYSAKQLGLKPEDVFLISAAKGQGIAELADAIEYYRDGKDVYVVGC 168
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS FIN ++K+ + + PGTTL I I LYDTPG
Sbjct: 169 TNVGKSTFINRMIKEFSDETENVITTSHF-------PGTTLDLIDI-PLDEESSLYDTPG 220
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ HH+ A V E L + P ++ F + E T+F+ GL R
Sbjct: 221 IINHHQMAHYVGKESLKLITPTKEIKPMVFQLNEEQ--------------TLFFSGLARF 266
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D + T + L ++ +KADE Y+ G L+PP ++ E
Sbjct: 267 DYVSG-GRRAFTCHFSNRLTIHRTKLEKADELYKNHAGDLLSPPTPEE---------LEN 316
Query: 461 LLE-IKFE-DTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVE 518
+ E +K+E + P +DV SGLGW++V + SG + HVPK V
Sbjct: 317 MPELVKYEFNIREPKTDVVFSGLGWVTV---------------NESGA-KIVAHVPKGVS 360
Query: 519 VFVRNPM 525
V +R +
Sbjct: 361 VSLRKSL 367
>gi|288906055|ref|YP_003431277.1| GTP-binding protein [Streptococcus gallolyticus UCN34]
gi|306832095|ref|ZP_07465249.1| ribosome biogenesis GTPase YqeH [Streptococcus gallolyticus subsp.
gallolyticus TX20005]
gi|325979020|ref|YP_004288736.1| GTP-binding protein engA [Streptococcus gallolyticus subsp.
gallolyticus ATCC BAA-2069]
gi|386338497|ref|YP_006034666.1| putative GTPase [Streptococcus gallolyticus subsp. gallolyticus
ATCC 43143]
gi|288732781|emb|CBI14355.1| putative conserved GTP-binding protein [Streptococcus gallolyticus
UCN34]
gi|304425534|gb|EFM28652.1| ribosome biogenesis GTPase YqeH [Streptococcus gallolyticus subsp.
gallolyticus TX20005]
gi|325178948|emb|CBZ48992.1| GTP-binding protein engA [Streptococcus gallolyticus subsp.
gallolyticus ATCC BAA-2069]
gi|334281133|dbj|BAK28707.1| putative GTPase [Streptococcus gallolyticus subsp. gallolyticus
ATCC 43143]
Length = 372
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 122/393 (31%), Positives = 192/393 (48%), Gaps = 48/393 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT + + GY E K + + C RC L H + IT V
Sbjct: 6 CIGCGAKIQTEDKEKAGYTPKAALE---KGLESGELYCQRCFRLRHYNEITDV------- 55
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ DE + L + AL+V +VDI DFNGS + + N ++LV K D+
Sbjct: 56 ----HITDDEFLKLLHEVGDSDALVVNVVDIFDFNGSVIPGLPRFVSGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + V W+ E ++ L + V LTS+++ I + +I+K ++GRDVY++G
Sbjct: 112 LPKSVKDSKVTQWLTERAHEEGLRPVDVILTSAQNHQAIKDLIEKIEKLRRGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA++K++ GE+D S PGTTL I+I G ++DTP
Sbjct: 172 TNVGKSTLINAIIKEITGEKDIITT---------SRFPGTTLDKIEI-PLDDGSYIFDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + ++L ++P+ ++ +++ + E T+F GL R
Sbjct: 222 GIIHRHQMAHYLGDKNLKYISPKKEIKPKTYQLNPEQ--------------TLFLAGLGR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + T Y +L+++ AD FY K +G LTPP K+ A D
Sbjct: 268 FDFISG-DKQGFTAYFDNNLKLHRTKLAGADAFYDKHVGSLLTPPTDKELA------DFP 320
Query: 460 RLLEIKFEDTERPASDVAISGLGWISVEPVRRS 492
+L ++ E T + DV SGLGWI ++ + S
Sbjct: 321 KL--VRHEFTIKAKMDVVYSGLGWIRIKASQDS 351
>gi|229175010|ref|ZP_04302529.1| hypothetical protein bcere0006_40930 [Bacillus cereus MM3]
gi|423457416|ref|ZP_17434213.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG5X2-1]
gi|228608471|gb|EEK65774.1| hypothetical protein bcere0006_40930 [Bacillus cereus MM3]
gi|401147800|gb|EJQ55293.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG5X2-1]
Length = 368
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 126/427 (29%), Positives = 191/427 (44%), Gaps = 68/427 (15%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG +QT + + GY + E ++ V+C RC L H + I V
Sbjct: 7 CIGCGVEIQTEDKNEVGYAPTSSLEKEQ-------VICQRCFRLKHYNEIQDVS------ 53
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ L+ + + AL+VK+VDI DFNGS+L + G N ++LV K DL
Sbjct: 54 -----LTDDDFLRILNGIGKSDALVVKIVDIFDFNGSWLPGLHRFVGNNKVLLVGNKADL 108
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
+PK + V W+ + + L V L S+ GI +A I+ + G+DVY++G
Sbjct: 109 IPKSVKHDKVKHWMRYSAKQLGLKPEDVFLISAAKGQGIAELADAIEYYRGGKDVYVVGC 168
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS FIN ++K+ + + PGTTL I I LYDTPG
Sbjct: 169 TNVGKSTFINRMIKEFSDETENVITTSHF-------PGTTLDLIDI-PLDEESSLYDTPG 220
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ HH+ A V E L + P ++ F + E T+F+ GL R
Sbjct: 221 IINHHQMAHYVGKESLKLITPTKEIKPMVFQLNEEQ--------------TLFFSGLARF 266
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D + T + L ++ +KADE Y+ G L+PP ++ E
Sbjct: 267 DYVSG-GRRAFTCHFSNRLTIHRTKLEKADELYKNHAGDLLSPPTPEE---------LEN 316
Query: 461 LLE-IKFE-DTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVE 518
+ E +K+E + P +DV SGLGW++V + SG + HVPK V
Sbjct: 317 MPELVKYEFNIREPKTDVVFSGLGWVTV---------------NESGA-KIVAHVPKGVS 360
Query: 519 VFVRNPM 525
V +R +
Sbjct: 361 VSLRKSL 367
>gi|374603054|ref|ZP_09676039.1| nitric-oxide synthase [Paenibacillus dendritiformis C454]
gi|374391367|gb|EHQ62704.1| nitric-oxide synthase [Paenibacillus dendritiformis C454]
Length = 372
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 122/436 (27%), Positives = 194/436 (44%), Gaps = 67/436 (15%)
Query: 92 LKVNSAVASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMIT 151
+K N C GCG +QT +D GYV ++C RC + H +
Sbjct: 1 MKDNQEKQVCSGCGVTVQTGHADQIGYVPASALNRSP-------LICQRCFRIKHYNEAA 53
Query: 152 AVGGNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPI 211
+V + D+ L + +E AL++ +VD+ DF+GS ++ ++ G NP+
Sbjct: 54 SVA-----------LDQDDFLRLLGRIGQEDALVIHIVDLFDFDGSVISGLQRFVGNNPV 102
Query: 212 ILVVTKVDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKK 271
+LVV K+DLLP+ T++N + +WV + L +L V L S+K AG + ++ ++
Sbjct: 103 LLVVNKIDLLPRSTNWNRLTNWVQRQAKEHGLRILDVILVSAKRNAGFERLVEQMSHWRR 162
Query: 272 GRDVYILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLG 331
GRDVY++G+ NVGKS IN L+ + D S PGTTL + I
Sbjct: 163 GRDVYVVGATNVGKSTLINRLIHDYSDMDRELTT--------SRYPGTTLDVVHI-PLDD 213
Query: 332 GGKLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFT 391
G + DTPG+ R + +DL AL P L+ + + NE G T
Sbjct: 214 GKHIIDTPGIVYTSRLTELASRQDLGALLPDKPLKPAVYQL-------NE-------GQT 259
Query: 392 IFWGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAE 451
+F+G R D ++ ++ T Y L ++ ++AD Y++ G L PP + +
Sbjct: 260 MFFGAFARFDFVEGERQS-FTCYISNGLPIHRTKLERADALYEEHRGELLAPPTRDRLDD 318
Query: 452 --GWKGLDRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHL 509
GW + ++ +D+ ISGLGWI G L +
Sbjct: 319 LPGWT--------KHQYRIATGSETDIFISGLGWIKC--------------NGKEGAL-V 355
Query: 510 AVHVPKPVEVFVRNPM 525
+H PK V+V R M
Sbjct: 356 EIHAPKGVKVLTRRAM 371
>gi|206969713|ref|ZP_03230667.1| GTPase family protein [Bacillus cereus AH1134]
gi|218233536|ref|YP_002369145.1| GTP-binding protein YqeH [Bacillus cereus B4264]
gi|228954622|ref|ZP_04116646.1| hypothetical protein bthur0006_39910 [Bacillus thuringiensis
serovar kurstaki str. T03a001]
gi|228960605|ref|ZP_04122252.1| hypothetical protein bthur0005_40690 [Bacillus thuringiensis
serovar pakistani str. T13001]
gi|229048042|ref|ZP_04193617.1| hypothetical protein bcere0027_40160 [Bacillus cereus AH676]
gi|229071842|ref|ZP_04205055.1| hypothetical protein bcere0025_40110 [Bacillus cereus F65185]
gi|229081599|ref|ZP_04214095.1| hypothetical protein bcere0023_42300 [Bacillus cereus Rock4-2]
gi|229111809|ref|ZP_04241355.1| hypothetical protein bcere0018_40530 [Bacillus cereus Rock1-15]
gi|229129616|ref|ZP_04258584.1| hypothetical protein bcere0015_40580 [Bacillus cereus BDRD-Cer4]
gi|229146907|ref|ZP_04275271.1| hypothetical protein bcere0012_40460 [Bacillus cereus BDRD-ST24]
gi|229152539|ref|ZP_04280729.1| hypothetical protein bcere0011_40750 [Bacillus cereus m1550]
gi|229180613|ref|ZP_04307954.1| hypothetical protein bcere0005_39570 [Bacillus cereus 172560W]
gi|229192548|ref|ZP_04319509.1| hypothetical protein bcere0002_41990 [Bacillus cereus ATCC 10876]
gi|296504828|ref|YP_003666528.1| GTP-binding protein YqeH [Bacillus thuringiensis BMB171]
gi|365158875|ref|ZP_09355065.1| ribosome biogenesis GTPase YqeH [Bacillus sp. 7_6_55CFAA_CT2]
gi|423411868|ref|ZP_17388988.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG3O-2]
gi|423426469|ref|ZP_17403500.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG3X2-2]
gi|423432346|ref|ZP_17409350.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG4O-1]
gi|423437781|ref|ZP_17414762.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG4X12-1]
gi|423502979|ref|ZP_17479571.1| ribosome biogenesis GTPase YqeH [Bacillus cereus HD73]
gi|423585185|ref|ZP_17561272.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VD045]
gi|423631058|ref|ZP_17606805.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VD154]
gi|423640584|ref|ZP_17616202.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VD166]
gi|423650200|ref|ZP_17625770.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VD169]
gi|423657291|ref|ZP_17632590.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VD200]
gi|449091299|ref|YP_007423740.1| GTPase family protein [Bacillus thuringiensis serovar kurstaki str.
HD73]
gi|206735401|gb|EDZ52569.1| GTPase family protein [Bacillus cereus AH1134]
gi|218161493|gb|ACK61485.1| GTPase family protein [Bacillus cereus B4264]
gi|228590855|gb|EEK48713.1| hypothetical protein bcere0002_41990 [Bacillus cereus ATCC 10876]
gi|228602856|gb|EEK60336.1| hypothetical protein bcere0005_39570 [Bacillus cereus 172560W]
gi|228630905|gb|EEK87544.1| hypothetical protein bcere0011_40750 [Bacillus cereus m1550]
gi|228636506|gb|EEK92972.1| hypothetical protein bcere0012_40460 [Bacillus cereus BDRD-ST24]
gi|228653733|gb|EEL09603.1| hypothetical protein bcere0015_40580 [Bacillus cereus BDRD-Cer4]
gi|228671565|gb|EEL26863.1| hypothetical protein bcere0018_40530 [Bacillus cereus Rock1-15]
gi|228701705|gb|EEL54195.1| hypothetical protein bcere0023_42300 [Bacillus cereus Rock4-2]
gi|228711272|gb|EEL63234.1| hypothetical protein bcere0025_40110 [Bacillus cereus F65185]
gi|228723286|gb|EEL74656.1| hypothetical protein bcere0027_40160 [Bacillus cereus AH676]
gi|228799084|gb|EEM46054.1| hypothetical protein bthur0005_40690 [Bacillus thuringiensis
serovar pakistani str. T13001]
gi|228805068|gb|EEM51663.1| hypothetical protein bthur0006_39910 [Bacillus thuringiensis
serovar kurstaki str. T03a001]
gi|296325880|gb|ADH08808.1| GTP-binding protein YqeH [Bacillus thuringiensis BMB171]
gi|363626245|gb|EHL77242.1| ribosome biogenesis GTPase YqeH [Bacillus sp. 7_6_55CFAA_CT2]
gi|401103936|gb|EJQ11913.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG3O-2]
gi|401111216|gb|EJQ19115.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG3X2-2]
gi|401117102|gb|EJQ24940.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG4O-1]
gi|401120936|gb|EJQ28732.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG4X12-1]
gi|401233828|gb|EJR40314.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VD045]
gi|401264425|gb|EJR70537.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VD154]
gi|401279645|gb|EJR85567.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VD166]
gi|401282618|gb|EJR88517.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VD169]
gi|401290034|gb|EJR95738.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VD200]
gi|402459200|gb|EJV90937.1| ribosome biogenesis GTPase YqeH [Bacillus cereus HD73]
gi|449025056|gb|AGE80219.1| GTPase family protein [Bacillus thuringiensis serovar kurstaki str.
HD73]
Length = 368
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 124/426 (29%), Positives = 190/426 (44%), Gaps = 66/426 (15%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG +QT + GY + E ++ V+C RC L H + I V
Sbjct: 7 CIGCGVEIQTENKNEVGYAPASSLEKEQ-------VICQRCFRLKHYNEIQDVS------ 53
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ L+ + + AL+VK+VDI DFNGS+L + G N ++LV K DL
Sbjct: 54 -----LTDDDFLRILNGIGKSDALVVKIVDIFDFNGSWLPGLHRFVGNNKVLLVGNKADL 108
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
+PK + V W+ + + L V L S+ GI +A I+ + G+DVY++G
Sbjct: 109 IPKSVKHDKVKHWMRYSAKQLGLKPEDVFLISAAKGQGIAELADAIEYYRGGKDVYVVGC 168
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS FIN ++K+ + + PGTTL I I LYDTPG
Sbjct: 169 TNVGKSTFINRMIKEFSDETENVITTSHF-------PGTTLDLIDI-PLDEESSLYDTPG 220
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ HH+ A V + L + P ++ F + E T+F+ GL R
Sbjct: 221 IINHHQMAHYVGKQSLKLITPTKEIKPMVFQLNEEQ--------------TLFFSGLARF 266
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D + T + L ++ +KADE Y+ G L+PP ++ A +
Sbjct: 267 DYVSG-GRRAFTCHFSNRLTIHRTKLEKADELYKNHAGDLLSPPTPEELA------NMPE 319
Query: 461 LLEIKFEDTERPASDVAISGLGWISV-EPVRRSIRNSDINLESTSGELHLAVHVPKPVEV 519
L++ +F + P +DV SGLGW++V EP + + HVPK V V
Sbjct: 320 LVKYEF-NIREPKTDVVFSGLGWVTVNEPGAK-----------------IVAHVPKGVSV 361
Query: 520 FVRNPM 525
+R +
Sbjct: 362 SLRKSL 367
>gi|293364879|ref|ZP_06611596.1| GTP-binding protein [Streptococcus oralis ATCC 35037]
gi|307703131|ref|ZP_07640077.1| conserved hypothetical protein [Streptococcus oralis ATCC 35037]
gi|291316329|gb|EFE56765.1| GTP-binding protein [Streptococcus oralis ATCC 35037]
gi|307623206|gb|EFO02197.1| conserved hypothetical protein [Streptococcus oralis ATCC 35037]
Length = 368
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 119/387 (30%), Positives = 192/387 (49%), Gaps = 48/387 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT++ G+ E K + V C RC L H + IT V
Sbjct: 6 CIGCGATIQTTDKTGLGFTPQSALE---KGLETGEVYCQRCFRLRHYNEITDVQ------ 56
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ + L + AL+V ++DI DFNGS + + N ++LV K D+
Sbjct: 57 -----LTDDDFLKLLHEVGDSDALVVNVIDIFDFNGSVIPGLPRFVSGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + + W++E ++ L + V LTS+++ I V +I+ +KGRDVY++G
Sbjct: 112 LPKSVKSSKISQWLMERAHEEGLRPVDVVLTSAQNKHAIKEVIDKIEHYRKGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G+++ S PGTTL I+I G +YDTP
Sbjct: 172 TNVGKSTLINAIIQEITGDQNVITT---------SRFPGTTLDKIEI-PLDDGSYIYDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + A++L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLTAKNLKYVSPKKEIKPKTYQLNPEQ--------------TLFLGGLGR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + F+ L+++ + A FY K LG LTPP K+K D
Sbjct: 268 FDFISGEKQGFTAFF-DNELKLHRTKLEGASAFYDKHLGTLLTPPNSKEKE------DFP 320
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
+L++ F T + +D+ ISGLGWI V
Sbjct: 321 KLVQHVF--TIKDKTDLVISGLGWIRV 345
>gi|423400818|ref|ZP_17377991.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG2X1-2]
gi|423478477|ref|ZP_17455192.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG6X1-1]
gi|401653808|gb|EJS71351.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG2X1-2]
gi|402428639|gb|EJV60736.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG6X1-1]
Length = 368
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 126/428 (29%), Positives = 191/428 (44%), Gaps = 70/428 (16%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG +QT + + GY + E ++ V+C RC L H + I V
Sbjct: 7 CIGCGVEIQTEDKNEVGYAPASSLEKEQ-------VICQRCFRLKHYNEIQDVS------ 53
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ L+ + + AL+VK+VDI DFNGS+L + G N ++LV K DL
Sbjct: 54 -----LTDDDFLRILNGIGKSDALVVKIVDIFDFNGSWLPGLHRFVGNNKVLLVGNKADL 108
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
+PK + V W+ + + L V L S+ GI +A I+ + G+DVY++G
Sbjct: 109 IPKSVKHDKVKHWMRYSAKQLGLKPEDVFLISAAKGQGIAELADAIEYYRGGKDVYVVGC 168
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS FIN ++K+ + + PGTTL I I LYDTPG
Sbjct: 169 TNVGKSTFINRMIKEFSDETENVITTSHF-------PGTTLDLIDI-PLDEESSLYDTPG 220
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ HH+ A V E L + P ++ F + E T+F+ GL R
Sbjct: 221 IINHHQMAHYVGKESLKLITPTKEIKPMVFQLNEEQ--------------TLFFSGLARF 266
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D + T + L ++ +KADE Y+ G L+PP ++ E
Sbjct: 267 DYVSG-GRRAFTCHFSNRLTIHRTKLEKADELYKNHAGDLLSPPTPEE---------LEN 316
Query: 461 LLE-IKFE-DTERPASDVAISGLGWISV-EPVRRSIRNSDINLESTSGELHLAVHVPKPV 517
+ E +K+E + P +DV SGLGW++V EP + + HVPK V
Sbjct: 317 MPELVKYEFNIREPKTDVVFSGLGWVTVNEPGAK-----------------IVAHVPKGV 359
Query: 518 EVFVRNPM 525
V +R +
Sbjct: 360 SVSLRKSL 367
>gi|387929813|ref|ZP_10132490.1| GTPase YqeH [Bacillus methanolicus PB1]
gi|387586631|gb|EIJ78955.1| GTPase YqeH [Bacillus methanolicus PB1]
Length = 368
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 133/431 (30%), Positives = 197/431 (45%), Gaps = 77/431 (17%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG +QT + GY E + V+C RC L H + I V
Sbjct: 8 CIGCGVKIQTEDPQELGYSPKSALEKDQ-------VICQRCFRLKHYNEIQDVN------ 54
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ + L+ + + +LIVK+VDI DFNGS+L + AG N I+LV KVDL
Sbjct: 55 -----LTDDDFLKILNKIGKSDSLIVKIVDIFDFNGSWLPGLHRFAGGNKILLVGNKVDL 109
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK N + W+ + + L V L S+ I A+ I ++G+DVY++G
Sbjct: 110 LPKSVKHNKLIHWMKQEARELGLKPEEVFLVSAAKGHFIKKTAAAIDDYRQGKDVYVVGC 169
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQI----DAFLGGGKL 335
NVGKS FIN ++K++ GE D S PGTTL I+I D F L
Sbjct: 170 TNVGKSTFINRIIKEVSGEGDIITT---------SHFPGTTLDIIKIPLDDDKF-----L 215
Query: 336 YDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWG 395
DTPG+ HH+ A V DL + P+ ++ + + + NE G T+F+G
Sbjct: 216 MDTPGIINHHQMAHFVDKRDLKTITPKKEIKPKVYQL-------NE-------GQTLFFG 261
Query: 396 GLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKG 455
GL R D L T Y L ++ + A E Y +G L+PP K++ + +
Sbjct: 262 GLARFDYL-TGGRRSFTCYLSNDLLIHRTKLENASELYNNHVGEMLSPP-RKEQLDSFPK 319
Query: 456 LDRERLLEIKFEDTERPASDVAISGLGWISV-EPVRRSIRNSDINLESTSGELHLAVHVP 514
L R + + +D+ SGLGW++V EP ++A +VP
Sbjct: 320 LVRHEFM------IKEGKTDIVFSGLGWVTVNEP-----------------GANVAAYVP 356
Query: 515 KPVEVFVRNPM 525
K V V +R +
Sbjct: 357 KGVHVVLRKSL 367
>gi|75761260|ref|ZP_00741242.1| GTP-binding protein [Bacillus thuringiensis serovar israelensis
ATCC 35646]
gi|218899503|ref|YP_002447914.1| GTP-binding protein YqeH [Bacillus cereus G9842]
gi|228902861|ref|ZP_04067004.1| hypothetical protein bthur0014_40310 [Bacillus thuringiensis IBL
4222]
gi|228941502|ref|ZP_04104052.1| hypothetical protein bthur0008_41400 [Bacillus thuringiensis
serovar berliner ATCC 10792]
gi|228967402|ref|ZP_04128435.1| hypothetical protein bthur0004_42030 [Bacillus thuringiensis
serovar sotto str. T04001]
gi|228974432|ref|ZP_04135000.1| hypothetical protein bthur0003_41860 [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228981027|ref|ZP_04141329.1| hypothetical protein bthur0002_41890 [Bacillus thuringiensis Bt407]
gi|384188409|ref|YP_005574305.1| GTP-binding protein YqeH [Bacillus thuringiensis serovar chinensis
CT-43]
gi|402564188|ref|YP_006606912.1| GTPase YqeH [Bacillus thuringiensis HD-771]
gi|410676724|ref|YP_006929095.1| GTP-binding protein [Bacillus thuringiensis Bt407]
gi|423358628|ref|ZP_17336131.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VD022]
gi|423385837|ref|ZP_17363093.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG1X1-2]
gi|423527806|ref|ZP_17504251.1| ribosome biogenesis GTPase YqeH [Bacillus cereus HuB1-1]
gi|423561196|ref|ZP_17537472.1| ribosome biogenesis GTPase YqeH [Bacillus cereus MSX-A1]
gi|434377503|ref|YP_006612147.1| GTPase YqeH [Bacillus thuringiensis HD-789]
gi|452200801|ref|YP_007480882.1| GTP-binding protein YqeH [Bacillus thuringiensis serovar
thuringiensis str. IS5056]
gi|74491242|gb|EAO54476.1| GTP-binding protein [Bacillus thuringiensis serovar israelensis
ATCC 35646]
gi|218541005|gb|ACK93399.1| GTPase family protein [Bacillus cereus G9842]
gi|228778687|gb|EEM26952.1| hypothetical protein bthur0002_41890 [Bacillus thuringiensis Bt407]
gi|228785268|gb|EEM33279.1| hypothetical protein bthur0003_41860 [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228792290|gb|EEM39859.1| hypothetical protein bthur0004_42030 [Bacillus thuringiensis
serovar sotto str. T04001]
gi|228818152|gb|EEM64227.1| hypothetical protein bthur0008_41400 [Bacillus thuringiensis
serovar berliner ATCC 10792]
gi|228856785|gb|EEN01302.1| hypothetical protein bthur0014_40310 [Bacillus thuringiensis IBL
4222]
gi|326942118|gb|AEA18014.1| GTP-binding protein YqeH [Bacillus thuringiensis serovar chinensis
CT-43]
gi|401084500|gb|EJP92746.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VD022]
gi|401201453|gb|EJR08318.1| ribosome biogenesis GTPase YqeH [Bacillus cereus MSX-A1]
gi|401635893|gb|EJS53648.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG1X1-2]
gi|401792840|gb|AFQ18879.1| GTPase YqeH [Bacillus thuringiensis HD-771]
gi|401876060|gb|AFQ28227.1| GTPase YqeH [Bacillus thuringiensis HD-789]
gi|402451469|gb|EJV83288.1| ribosome biogenesis GTPase YqeH [Bacillus cereus HuB1-1]
gi|409175853|gb|AFV20158.1| GTP-binding protein [Bacillus thuringiensis Bt407]
gi|452106194|gb|AGG03134.1| GTP-binding protein YqeH [Bacillus thuringiensis serovar
thuringiensis str. IS5056]
Length = 368
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 124/426 (29%), Positives = 190/426 (44%), Gaps = 66/426 (15%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG +QT + GY + E ++ V+C RC L H + I V
Sbjct: 7 CIGCGVEIQTENKNEVGYAPTSSLEKEQ-------VICQRCFRLKHYNEIQDVS------ 53
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ L+ + + AL+VK+VDI DFNGS+L + G N ++LV K DL
Sbjct: 54 -----LTDDDFLRILNGIGKSDALVVKIVDIFDFNGSWLPGLHRFVGNNKVLLVGNKADL 108
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
+PK + V W+ + + L V L S+ GI +A I+ + G+DVY++G
Sbjct: 109 IPKSVKHDKVKHWMRYSAKQLGLKPEDVFLISAAKGQGIAELADAIEYYRGGKDVYVVGC 168
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS FIN ++K+ + + PGTTL I I LYDTPG
Sbjct: 169 TNVGKSTFINRMIKEFSDETENVITTSHF-------PGTTLDLIDI-PLDEESSLYDTPG 220
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ HH+ A V + L + P ++ F + E T+F+ GL R
Sbjct: 221 IINHHQMAHYVGKQSLKLITPTKEIKPMVFQLNEEQ--------------TLFFSGLARF 266
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D + T + L ++ +KADE Y+ G L+PP ++ A +
Sbjct: 267 DYVSG-GRRAFTCHFSNRLTIHRTKLEKADELYKNHAGDLLSPPTPEELA------NMPE 319
Query: 461 LLEIKFEDTERPASDVAISGLGWISV-EPVRRSIRNSDINLESTSGELHLAVHVPKPVEV 519
L++ +F + P +DV SGLGW++V EP + + HVPK V V
Sbjct: 320 LVKYEF-NIREPKTDVVFSGLGWVTVNEPGAK-----------------IVAHVPKGVSV 361
Query: 520 FVRNPM 525
+R +
Sbjct: 362 SLRKSL 367
>gi|385813393|ref|YP_005849786.1| Ribosome biogenesis GTPase YqeH [Lactobacillus helveticus H10]
gi|323466112|gb|ADX69799.1| Ribosome biogenesis GTPase YqeH [Lactobacillus helveticus H10]
Length = 369
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 122/386 (31%), Positives = 182/386 (47%), Gaps = 46/386 (11%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA LQ+ + GY+ E K K+ + V C RC L H + I V N
Sbjct: 7 CIGCGAVLQSDDPQKAGYLPKSALE-KAKNEENTDVYCQRCFKLRHYNEIMPVDLNN--- 62
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
D+ L+ L +KALIV +VD+ DF+ S L+ ++ G N ILV K DL
Sbjct: 63 --------DDFLALLNSLAEKKALIVNVVDLFDFSNSLLSSLKRFVGNNDFILVGNKFDL 114
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
PK + + + DW+ + + L + L S+K + + S I + + +DVY +G+
Sbjct: 115 FPKNSKQSKIKDWMRQEANRMGLYPKDIFLVSAKKKLNLESLISYINDQSQDKDVYFVGT 174
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS INA++ MG+ S PGTTL I+I G L DTPG
Sbjct: 175 TNVGKSTLINAIIDMMGDIQNLIT--------TSRFPGTTLDQIEI-PLENGHFLIDTPG 225
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ ++ A ++A+DL ++P+ L+ ++ + L G T+F GL RI
Sbjct: 226 IMTDNQLATHLNAKDLELISPKKPLKPATYQL--------------LPGNTLFLAGLGRI 271
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D LK T T Y +++ V+ T AD FY+K G L PP + KG +E
Sbjct: 272 DYLKG-ESTSFTVYVARNMYVHRTKTTNADAFYEKHKGELLAPPSPDDQMALLKG--KEF 328
Query: 461 LLEIKFEDTERPASDVAISGLGWISV 486
E K SD+ G+G+++V
Sbjct: 329 KTEFK--------SDLLFGGIGFVTV 346
>gi|422723394|ref|ZP_16779930.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX2137]
gi|424671902|ref|ZP_18108889.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis 599]
gi|315026558|gb|EFT38490.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX2137]
gi|402357870|gb|EJU92567.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis 599]
Length = 369
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 129/390 (33%), Positives = 188/390 (48%), Gaps = 49/390 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT GY +E K + V C RC L H + I V
Sbjct: 7 CIGCGAIIQTENPHELGYTPKTAFE---KGMETGEVYCQRCFRLRHYNDIQDV------- 56
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
Q D LR L+ L E ALIV +VDI DFNGS + + G NP++LV KVD+
Sbjct: 57 ---QLTDDDFLR-LLNGLGTEDALIVNVVDIFDFNGSLIPGLHRFIGDNPVLLVGNKVDI 112
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W+ E + L + V LTS K + + I+K ++GRDVY++G
Sbjct: 113 LPKSLKKPKMVQWMRERAHEAGLRPVDVLLTSGKKPQEMQELLDTIEKYREGRDVYVVGV 172
Query: 281 ANVGKSAFINALLKK-MGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS IN ++++ +G +D S PGTTL I+I G L DTP
Sbjct: 173 TNVGKSTLINQIIQQTVGVQDVITT---------SQFPGTTLDKIEI-PLDDGHFLIDTP 222
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + +DL +APQ ++ + + + +E T+F GGL R
Sbjct: 223 GIIHRHQMAHYLGKKDLKIIAPQKEIKPKVYQLNAEQ--------------TLFLGGLAR 268
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D ++ ++ Y L ++ T AD FY+K +G L PP + AE + L
Sbjct: 269 FDYVQG-AKSSFIAYVSNDLNLHRTKTATADAFYEKHVGGLLQPPRADEVAE-FPEL--- 323
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV-EP 488
++FE + + +D+ +GLGWI+V EP
Sbjct: 324 ----VRFEFSVKEKTDIVFAGLGWITVTEP 349
>gi|229549019|ref|ZP_04437744.1| GTP-binding protein [Enterococcus faecalis ATCC 29200]
gi|257421576|ref|ZP_05598566.1| conserved hypothetical protein [Enterococcus faecalis X98]
gi|293382471|ref|ZP_06628406.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis R712]
gi|293387145|ref|ZP_06631706.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis S613]
gi|294779514|ref|ZP_06744909.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis PC1.1]
gi|300860377|ref|ZP_07106464.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TUSoD Ef11]
gi|307268318|ref|ZP_07549699.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX4248]
gi|307272112|ref|ZP_07553375.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0855]
gi|307276172|ref|ZP_07557303.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX2134]
gi|307280576|ref|ZP_07561624.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0860]
gi|307289801|ref|ZP_07569737.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0411]
gi|312901412|ref|ZP_07760689.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0470]
gi|312904375|ref|ZP_07763536.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0635]
gi|312906526|ref|ZP_07765528.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis DAPTO 512]
gi|312910471|ref|ZP_07769317.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis DAPTO 516]
gi|312951126|ref|ZP_07770031.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0102]
gi|384514140|ref|YP_005709233.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis OG1RF]
gi|384519605|ref|YP_005706910.1| GTPase [Enterococcus faecalis 62]
gi|397701049|ref|YP_006538837.1| GTPase [Enterococcus faecalis D32]
gi|421512806|ref|ZP_15959601.1| GTP-binding protein YqeH, required for biogenesis of 30S ribosome
subunit [Enterococcus faecalis ATCC 29212]
gi|422690220|ref|ZP_16748278.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0630]
gi|422691066|ref|ZP_16749105.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0031]
gi|422693689|ref|ZP_16751697.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX4244]
gi|422697540|ref|ZP_16755476.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX1346]
gi|422706087|ref|ZP_16763792.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0043]
gi|422709128|ref|ZP_16766641.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0027]
gi|422726077|ref|ZP_16782532.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0312]
gi|422731150|ref|ZP_16787525.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0645]
gi|422734052|ref|ZP_16790349.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX1341]
gi|424757360|ref|ZP_18185109.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis R508]
gi|428767963|ref|YP_007154074.1| GTP-binding protein YqeH [Enterococcus faecalis str. Symbioflor 1]
gi|430359132|ref|ZP_19425748.1| nitric-oxide synthase [Enterococcus faecalis OG1X]
gi|430370883|ref|ZP_19429290.1| nitric-oxide synthase [Enterococcus faecalis M7]
gi|229305812|gb|EEN71808.1| GTP-binding protein [Enterococcus faecalis ATCC 29200]
gi|257163400|gb|EEU93360.1| conserved hypothetical protein [Enterococcus faecalis X98]
gi|291080155|gb|EFE17519.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis R712]
gi|291083416|gb|EFE20379.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis S613]
gi|294453393|gb|EFG21800.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis PC1.1]
gi|300849416|gb|EFK77166.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TUSoD Ef11]
gi|306499135|gb|EFM68614.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0411]
gi|306503942|gb|EFM73159.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0860]
gi|306507166|gb|EFM76305.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX2134]
gi|306511228|gb|EFM80235.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0855]
gi|306515344|gb|EFM83878.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX4248]
gi|310627469|gb|EFQ10752.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis DAPTO 512]
gi|310630902|gb|EFQ14185.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0102]
gi|310632274|gb|EFQ15557.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0635]
gi|311289243|gb|EFQ67799.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis DAPTO 516]
gi|311291488|gb|EFQ70044.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0470]
gi|315036287|gb|EFT48219.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0027]
gi|315148844|gb|EFT92860.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX4244]
gi|315154134|gb|EFT98150.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0031]
gi|315156471|gb|EFU00488.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0043]
gi|315159003|gb|EFU03020.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0312]
gi|315162818|gb|EFU06835.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0645]
gi|315169160|gb|EFU13177.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX1341]
gi|315173920|gb|EFU17937.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX1346]
gi|315576864|gb|EFU89055.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0630]
gi|323481738|gb|ADX81177.1| GTPase of unknown function family protein [Enterococcus faecalis
62]
gi|327536029|gb|AEA94863.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis OG1RF]
gi|397337688|gb|AFO45360.1| GTPase of unknown function family protein [Enterococcus faecalis
D32]
gi|401674071|gb|EJS80434.1| GTP-binding protein YqeH, required for biogenesis of 30S ribosome
subunit [Enterococcus faecalis ATCC 29212]
gi|402407202|gb|EJV39737.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis R508]
gi|427186136|emb|CCO73360.1| GTP-binding protein YqeH [Enterococcus faecalis str. Symbioflor 1]
gi|429513487|gb|ELA03068.1| nitric-oxide synthase [Enterococcus faecalis OG1X]
gi|429515248|gb|ELA04766.1| nitric-oxide synthase [Enterococcus faecalis M7]
Length = 369
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 129/390 (33%), Positives = 188/390 (48%), Gaps = 49/390 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT GY +E K + V C RC L H + I V
Sbjct: 7 CIGCGAIIQTENPHELGYTPKTAFE---KGMETGEVYCQRCFRLRHYNDIQDV------- 56
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
Q D LR L+ L E ALIV +VDI DFNGS + + G NP++LV KVD+
Sbjct: 57 ---QLTDDDFLR-LLNGLGTEDALIVNVVDIFDFNGSLIPGLHRFIGDNPVLLVGNKVDI 112
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W+ E + L + V LTS K + + I+K ++GRDVY++G
Sbjct: 113 LPKSLKKPKMVQWMRERAHEAGLRPVDVLLTSGKKPQEMQELLDTIEKYREGRDVYVVGV 172
Query: 281 ANVGKSAFINALLKK-MGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS IN ++++ +G +D S PGTTL I+I G L DTP
Sbjct: 173 TNVGKSTLINQIIQQTVGVQDVITT---------SQFPGTTLDKIEI-PLDDGHFLIDTP 222
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + +DL +APQ ++ + + + +E T+F GGL R
Sbjct: 223 GIIHRHQMAHYLGKKDLKIIAPQKEIKPKVYQLNAEQ--------------TLFLGGLAR 268
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D ++ ++ Y L ++ T AD FY+K +G L PP + AE + L
Sbjct: 269 FDYVQG-AKSSFIAYVSNDLNLHRTKTATADAFYEKHVGGLLQPPRADEVAE-FPEL--- 323
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV-EP 488
++FE + + +D+ +GLGWI+V EP
Sbjct: 324 ----VRFEFSVKEKTDIVFAGLGWITVTEP 349
>gi|422699648|ref|ZP_16757511.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX1342]
gi|315171886|gb|EFU15903.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX1342]
Length = 369
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 129/390 (33%), Positives = 188/390 (48%), Gaps = 49/390 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT GY +E K + V C RC L H + I V
Sbjct: 7 CIGCGAIIQTENPHELGYTPKTAFE---KGMETGEVYCQRCFRLRHYNDIQDV------- 56
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
Q D LR L+ L E ALIV +VDI DFNGS + + G NP++LV KVD+
Sbjct: 57 ---QLTDDDFLR-LLNGLGTEDALIVNVVDIFDFNGSLIPGLHRFIGDNPVLLVGNKVDI 112
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W+ E + L + V LTS K + + I+K ++GRDVY++G
Sbjct: 113 LPKSLKKPKMVQWMRERAHEAGLRPVDVLLTSGKKPEEMQELLDTIEKYREGRDVYVVGV 172
Query: 281 ANVGKSAFINALLKK-MGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS IN ++++ +G +D S PGTTL I+I G L DTP
Sbjct: 173 TNVGKSTLINQIIQQTVGVQDVITT---------SQFPGTTLDKIEI-PLDDGHFLIDTP 222
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + +DL +APQ ++ + + + +E T+F GGL R
Sbjct: 223 GIIHRHQMAHYLGKKDLKIIAPQKEIKPKVYQLNAEQ--------------TLFLGGLAR 268
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D ++ ++ Y L ++ T AD FY+K +G L PP + AE + L
Sbjct: 269 FDYVQG-AKSSFIAYVSNDLNLHRTKTATADAFYEKHVGGLLQPPRADEVAE-FPEL--- 323
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV-EP 488
++FE + + +D+ +GLGWI+V EP
Sbjct: 324 ----VRFEFSVKEKTDIVFAGLGWITVTEP 349
>gi|306834207|ref|ZP_07467327.1| ribosome biogenesis GTPase YqeH [Streptococcus bovis ATCC 700338]
gi|304423780|gb|EFM26926.1| ribosome biogenesis GTPase YqeH [Streptococcus bovis ATCC 700338]
Length = 372
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 127/426 (29%), Positives = 201/426 (47%), Gaps = 61/426 (14%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +Q + + GY E K + + C RC L H + IT V
Sbjct: 6 CIGCGAKIQIEDKEKVGYTPKAALE---KGLESGELYCQRCFRLRHYNEITDV------- 55
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ DE + L + AL+V +VDI DFNGS + + N ++LV K D+
Sbjct: 56 ----HITDDEFLKLLHEVGDSDALVVNVVDIFDFNGSVIPGLPRFVSGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + V W+ E ++ L + V LTS+++ I + +I+K ++GRDVY++G
Sbjct: 112 LPKSVKDSKVTQWLTERAHEEGLRPVDVILTSAQNHQAIKDLIEKIEKLRRGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA++K++ GE+D S PGTTL I+I G ++DTP
Sbjct: 172 TNVGKSTLINAIIKEITGEKDIITT---------SRFPGTTLDKIEI-PLDDGSYIFDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + ++L ++P+ ++ +++ + E T+F GL R
Sbjct: 222 GIIHRHQMAHYLGDKNLKYISPKKEIKPKTYQLNPEQ--------------TLFLAGLGR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + T Y +L+++ AD FY K +G LTPPI K+ A D
Sbjct: 268 FDFISG-DKQGFTAYFDNNLKLHRTKLAGADAFYDKHVGSLLTPPIDKELA------DFP 320
Query: 460 RLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVEV 519
+L ++ E T + DV SGLGWI ++ S + +A P+ V V
Sbjct: 321 KL--VRHEFTIKAKMDVVYSGLGWIRIKA-------------SQDSSVKIAAWAPEGVAV 365
Query: 520 FVRNPM 525
+R +
Sbjct: 366 LLRKAL 371
>gi|58337796|ref|YP_194381.1| GTP-binding protein YqeH [Lactobacillus acidophilus NCFM]
gi|227904446|ref|ZP_04022251.1| GTP-binding protein [Lactobacillus acidophilus ATCC 4796]
gi|58255113|gb|AAV43350.1| GTP-binding protein [Lactobacillus acidophilus NCFM]
gi|227867821|gb|EEJ75242.1| GTP-binding protein [Lactobacillus acidophilus ATCC 4796]
Length = 369
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 121/386 (31%), Positives = 181/386 (46%), Gaps = 46/386 (11%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA LQ+ + GY+ P + K K + V C RC L H + I V N
Sbjct: 7 CVGCGAILQSDDPKKAGYL-PKSALDKAKREENTDVYCQRCFRLRHYNEIMPVDLNN--- 62
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
D+ L+ L +KAL+V +VD+ DF+ S L+ ++ G N ILV K DL
Sbjct: 63 --------DDFLALLNSLSEKKALVVNVVDLFDFSNSLLSSLKRFVGNNDFILVGNKFDL 114
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
PK + + + DW+ + + L + L S+K + + S I + +DVY +G+
Sbjct: 115 FPKNSKQSKIKDWMRQEANRMGLYPKDIFLVSAKKKVNLESLISYINDHSQDKDVYFVGT 174
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS INA++ MG+ S PGTTL I+I G L DTPG
Sbjct: 175 TNVGKSTLINAIIDMMGDIQDLIT--------TSRFPGTTLDQIEI-PLENGHFLIDTPG 225
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ ++ A ++A+DL ++P+ L+ ++ + L G T+F GL RI
Sbjct: 226 IMTDNQLATHLNAKDLELVSPKKPLKPATYQL--------------LPGNTLFLAGLGRI 271
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D LK T T Y + + V+ T AD FY+K G LTPP + KG +E
Sbjct: 272 DFLKG-ESTSFTVYVARDMYVHRTKTANADAFYEKHKGELLTPPSADDQMAPLKG--KEF 328
Query: 461 LLEIKFEDTERPASDVAISGLGWISV 486
+ K SD+ G+G+++V
Sbjct: 329 RTDYK--------SDLLFGGIGFVTV 346
>gi|335029055|ref|ZP_08522567.1| ribosome biogenesis GTPase YqeH [Streptococcus infantis SK1076]
gi|334269456|gb|EGL87873.1| ribosome biogenesis GTPase YqeH [Streptococcus infantis SK1076]
Length = 368
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 119/387 (30%), Positives = 191/387 (49%), Gaps = 48/387 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT + G+ E K + V C RC L H + IT V
Sbjct: 6 CIGCGATIQTEDKTGLGFTPQSALE---KGLETGEVYCQRCFRLRHYNEITDVQ------ 56
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ + L + AL+V ++DI DFNGS + + N ++LV K D+
Sbjct: 57 -----LTDDDFLKLLHEVGDSDALVVNVIDIFDFNGSVIPGLPRFVSGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W++E ++ L + V LTS+++ I V +I+ +KGRDVY++G
Sbjct: 112 LPKSVKAGKISQWLMERAHEEGLRPVDVVLTSAQNKHAIKEVIEKIEHYRKGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G+++ S PGTTL I+I G +YDTP
Sbjct: 172 TNVGKSTLINAIIQEITGDQNVITT---------SRFPGTTLDKIEI-PLDDGSYIYDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + A++L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLTAKNLKYVSPKKEIKPKTYQLNPEQ--------------TLFLGGLGR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + F+ L+++ + A +FY K LG LTPP K+K D
Sbjct: 268 FDFIAGEKQGFTAFF-DNELKLHRTKLEGASDFYDKHLGTLLTPPNSKEKE------DFP 320
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
+L++ F T + +D+ ISGLGWI V
Sbjct: 321 KLVQHVF--TIKDKTDLVISGLGWIRV 345
>gi|256763435|ref|ZP_05504015.1| nitric-oxide synthase [Enterococcus faecalis T3]
gi|256684686|gb|EEU24381.1| nitric-oxide synthase [Enterococcus faecalis T3]
Length = 375
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 129/402 (32%), Positives = 195/402 (48%), Gaps = 50/402 (12%)
Query: 89 DKVLKVNSAVASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGH 148
++ +++ A+ C GCGA +QT GY +E K + + C RC L H +
Sbjct: 2 ERRIRMTEAI-HCIGCGAIIQTENPHELGYTPKTAFE---KGMETGEIYCQRCFRLRHYN 57
Query: 149 MITAVGGNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGA 208
I V Q D LR L+ L E ALIV +VDI DFNGS + + G
Sbjct: 58 DIQDV----------QLTDDDFLR-LLNGLGTEDALIVNVVDIFDFNGSLIPGLHRFIGD 106
Query: 209 NPIILVVTKVDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQK 268
NP++LV KVD+LPK + W+ E + L + V LTS K + + I+K
Sbjct: 107 NPVLLVGNKVDILPKSLKKPKMVQWMRERAHEAGLRPVDVLLTSGKKPQEMQELLDTIEK 166
Query: 269 EKKGRDVYILGSANVGKSAFINALLKK-MGERDPAAAMAQKYRPIQSAVPGTTLGPIQID 327
++GRDVY++G NVGKS IN ++++ +G +D S PGTTL I+I
Sbjct: 167 YREGRDVYVVGVTNVGKSTLINQIIQQTVGVQDVITT---------SQFPGTTLDKIEI- 216
Query: 328 AFLGGGKLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGL 387
G L DTPG+ H+ A + +DL +APQ ++ + + + +E
Sbjct: 217 PLDDGHFLIDTPGIIHRHQMAHYLGKKDLKIIAPQKEIKPKVYQLNAEQ----------- 265
Query: 388 NGFTIFWGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGK 447
T+F GGL R D ++ ++ Y L ++ T AD FY+K +G L PP
Sbjct: 266 ---TLFLGGLARFDYVQG-AKSSFIAYVSNDLNLHRTKTATADAFYEKHVGGLLQPPRAD 321
Query: 448 QKAEGWKGLDRERLLEIKFEDTERPASDVAISGLGWISV-EP 488
+ AE + L ++FE + + +D+ +GLGWI+V EP
Sbjct: 322 EVAE-FPEL-------VRFEFSVKEKTDIVFAGLGWITVTEP 355
>gi|227892823|ref|ZP_04010628.1| GTP-binding protein [Lactobacillus ultunensis DSM 16047]
gi|227865325|gb|EEJ72746.1| GTP-binding protein [Lactobacillus ultunensis DSM 16047]
Length = 369
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 121/386 (31%), Positives = 182/386 (47%), Gaps = 46/386 (11%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA LQ+ + GY+ E K K+ + V C RC L H + I V N
Sbjct: 7 CIGCGATLQSDDPKKAGYLPKSALE-KAKNEENTDVYCQRCFRLRHYNEIMPVDLNN--- 62
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
D+ L+ L +KAL+V +VD+ DF+ S L+ ++ G N ILV K DL
Sbjct: 63 --------DDFLALLNSLSEKKALVVNVVDLFDFSNSLLSSLKRFVGKNDFILVGNKFDL 114
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
PK + + + DW+ + + L + L S+K + + + I K+ + +DVY +G+
Sbjct: 115 FPKNSKQSKIKDWMRQKANRMGLFPKEIFLVSAKKKLNLEKLIAYINKQSQDKDVYFVGT 174
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS INA++ MG+ S PGTTL I+I G L DTPG
Sbjct: 175 TNVGKSTLINAIIDMMGDIQDLIT--------TSRFPGTTLDQIEI-PLDSGHFLIDTPG 225
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ ++ A ++A+DL ++P+ L+ ++ + L G T+F GL RI
Sbjct: 226 IMTDNQLATHLNAKDLELISPKKPLKPATYQL--------------LPGNTLFLAGLGRI 271
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D LK T T Y + + V+ T AD FY+K G L PP + KG +E
Sbjct: 272 DYLKG-ESTSFTVYVARGMYVHRTKTTNADAFYEKHKGELLAPPAKDDEMASLKG--QEF 328
Query: 461 LLEIKFEDTERPASDVAISGLGWISV 486
E K SD+ G+G+++V
Sbjct: 329 KTEYK--------SDLLFGGIGFVTV 346
>gi|260103146|ref|ZP_05753383.1| GTP-binding protein [Lactobacillus helveticus DSM 20075]
gi|417009774|ref|ZP_11945910.1| GTPase YqeH [Lactobacillus helveticus MTCC 5463]
gi|260083056|gb|EEW67176.1| GTP-binding protein [Lactobacillus helveticus DSM 20075]
gi|328464795|gb|EGF36110.1| GTPase YqeH [Lactobacillus helveticus MTCC 5463]
Length = 369
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 122/386 (31%), Positives = 182/386 (47%), Gaps = 46/386 (11%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA LQ+ + GY+ E K K+ + V C RC L H + I V N
Sbjct: 7 CIGCGAVLQSDDPQKAGYLPKGALE-KAKNEENTDVYCQRCFKLRHYNEIMPVDLNN--- 62
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
D+ L+ L +KALIV +VD+ DF+ S L+ ++ G N ILV K DL
Sbjct: 63 --------DDFLALLNSLAEKKALIVNVVDLFDFSNSLLSSLKRFVGNNDFILVGNKFDL 114
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
PK + + + DW+ + + L + L S+K + + S I + + +DVY +G+
Sbjct: 115 FPKNSKQSKIKDWMRQEANRMGLYPKDIFLVSAKKKLNLESLISYINDQSQDKDVYFVGT 174
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS INA++ MG+ S PGTTL I+I G L DTPG
Sbjct: 175 TNVGKSTLINAIIDMMGDIQNLIT--------TSRFPGTTLDQIEI-PLENGHFLIDTPG 225
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ ++ A ++A+DL ++P+ L+ ++ + L G T+F GL RI
Sbjct: 226 IMTDNQLATHLNAKDLELISPKKPLKPATYQL--------------LPGNTLFLAGLGRI 271
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D LK T T Y +++ V+ T AD FY+K G L PP + KG +E
Sbjct: 272 DYLKG-ESTSFTVYVARNMYVHRTKTTNADAFYEKHKGELLAPPSPDDQMAPLKG--KEF 328
Query: 461 LLEIKFEDTERPASDVAISGLGWISV 486
E K SD+ G+G+++V
Sbjct: 329 KTEFK--------SDLLFGGIGFVTV 346
>gi|295113743|emb|CBL32380.1| ribosome biogenesis GTPase YqeH [Enterococcus sp. 7L76]
Length = 369
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 128/390 (32%), Positives = 188/390 (48%), Gaps = 49/390 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT GY +E K + + C RC L H + I V
Sbjct: 7 CIGCGAIIQTENPHELGYTPKTAFE---KGMETGEIYCQRCFRLRHYNDIQDV------- 56
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
Q D LR L+ L E ALIV +VDI DFNGS + + G NP++LV KVD+
Sbjct: 57 ---QLTDDDFLR-LLNGLGTEDALIVNVVDIFDFNGSLIPGLHRFIGDNPVLLVGNKVDI 112
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W+ E + L + V LTS K + + I+K ++GRDVY++G
Sbjct: 113 LPKSLKKPKMVQWMRERAHEAGLRPVDVLLTSGKKPQEMQELLDTIEKYREGRDVYVVGV 172
Query: 281 ANVGKSAFINALLKK-MGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS IN ++++ +G +D S PGTTL I+I G L DTP
Sbjct: 173 TNVGKSTLINQIIQQTVGVQDVITT---------SQFPGTTLDKIEI-PLDDGHFLIDTP 222
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + +DL +APQ ++ + + + +E T+F GGL R
Sbjct: 223 GIIHRHQMAHYLGKKDLKIIAPQKEIKPKVYQLNAEQ--------------TLFLGGLAR 268
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D ++ ++ Y L ++ T AD FY+K +G L PP + AE + L
Sbjct: 269 FDYVQG-AKSSFIAYVSNDLNLHRTKTATADAFYEKHVGGLLQPPRADEVAE-FPEL--- 323
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV-EP 488
++FE + + +D+ +GLGWI+V EP
Sbjct: 324 ----VRFEFSVKEKTDIVFAGLGWITVTEP 349
>gi|342164515|ref|YP_004769154.1| GTPase YqeH [Streptococcus pseudopneumoniae IS7493]
gi|341934397|gb|AEL11294.1| GTPase YqeH [Streptococcus pseudopneumoniae IS7493]
Length = 368
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 126/426 (29%), Positives = 203/426 (47%), Gaps = 65/426 (15%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT++ G+ E K + V C RC L H + IT V
Sbjct: 6 CIGCGATIQTTDKAGLGFTPQSALE---KGLETGEVYCQRCFRLRHYNEITDVQ------ 56
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ + L + AL+V ++DI DFNGS + + N ++LV K D+
Sbjct: 57 -----LTDDDFLKLLHEVGDSDALVVNVIDIFDFNGSVIPGLPRFVSGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W++E ++ L + V LTS+++ I V +I+ +KGRDVY++G
Sbjct: 112 LPKSVKPGKISQWLMERAHEEGLRPVDVVLTSAQNKHAIKEVIDKIEHYRKGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G+++ S PGTTL I+I G +YDTP
Sbjct: 172 TNVGKSTLINAIIQEITGDQNVITT---------SRFPGTTLDKIEI-PLDDGSYIYDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + A++L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLTAKNLKYVSPKKEIKPKTYQLNPEQ--------------TLFLGGLGR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + F+ L+++ + A FY K +G LTPP K+K D
Sbjct: 268 FDFISGEKQGFTAFF-DNELKLHRTKLEGASAFYDKHVGTLLTPPNSKEKE------DFP 320
Query: 460 RLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVEV 519
+L+E F T + +D+ ISGLGWI V +G +AV P+ V V
Sbjct: 321 KLIEHVF--TIKDKTDLVISGLGWIRV-----------------TGTAKVAVWAPEGVAV 361
Query: 520 FVRNPM 525
+R +
Sbjct: 362 VIRKAI 367
>gi|417922946|ref|ZP_12566429.1| ribosome biogenesis GTPase YqeH [Streptococcus mitis SK569]
gi|342837476|gb|EGU71661.1| ribosome biogenesis GTPase YqeH [Streptococcus mitis SK569]
Length = 368
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 119/387 (30%), Positives = 192/387 (49%), Gaps = 48/387 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT++ G+ E K + V C RC L H + IT V
Sbjct: 6 CIGCGATIQTTDKAGLGFTPQSALE---KGLETGEVYCQRCFRLRHYNEITDVQ------ 56
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ + L + AL+V ++DI DFNGS + + N ++LV K D+
Sbjct: 57 -----LTDDDFLKLLHEVGDSDALVVNVIDIFDFNGSVIPGLPRFVSGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W++E ++ L + V LTS+++ I V +I+ +KGRDVY++G
Sbjct: 112 LPKSVKPGKISQWLMERAHEEGLRPVDVVLTSAQNKHAIKEVIDKIEHYRKGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G+++ S PGTTL I+I G +YDTP
Sbjct: 172 TNVGKSTLINAIIQEITGDQNVITT---------SRFPGTTLDKIEI-PLDDGSYIYDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + A++L ++P+ ++ +++ + SE T+F GGL R
Sbjct: 222 GIIHRHQMAHYLTAKNLKYVSPKKEIKPKTYQLNSEQ--------------TLFLGGLGR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + F+ L+++ + A FY K LG LTPP K+K D
Sbjct: 268 FDFISGEKQGFTAFF-DNELKLHRTKLEGASAFYDKHLGTLLTPPNSKEKE------DFP 320
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
+L++ F ++ +D+ ISGLGWI V
Sbjct: 321 KLVQHVFNIKDK--TDLVISGLGWIRV 345
>gi|385262972|ref|ZP_10041069.1| ribosome biogenesis GTPase YqeH [Streptococcus sp. SK643]
gi|385188947|gb|EIF36417.1| ribosome biogenesis GTPase YqeH [Streptococcus sp. SK643]
Length = 368
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 120/387 (31%), Positives = 191/387 (49%), Gaps = 48/387 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT++ G+ E K + V C RC L H + IT V
Sbjct: 6 CIGCGATIQTTDKAGLGFTPQSALE---KGLETGEVYCQRCFRLRHYNEITDVQ------ 56
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ + L + AL+V ++DI DFNGS + + N ++LV K D+
Sbjct: 57 -----LTDDDFLKLLHEVGDSDALVVNVIDIFDFNGSVIPGLPRFVSGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W++E ++ L + V LTS+++ I V +I+ +KGRDVY++G
Sbjct: 112 LPKSVKPGKISQWLMERAHEEGLRPVDVVLTSAQNKHAIKEVIDKIEHYRKGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G+++ S PGTTL I+I G +YDTP
Sbjct: 172 TNVGKSTLINAIIQEITGDQNVITT---------SRFPGTTLDKIEI-PLDDGSYIYDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + A++L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLTAKNLKYVSPKKEIKPKTYQLNPEQ--------------TLFLGGLGR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + F+ L+++ + A FY K LG LTPP K+K D
Sbjct: 268 FDFIAGEKQGFTAFF-DNELKLHRTKLEGASAFYDKHLGTLLTPPNSKEKE------DFP 320
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
+L+E F T + +D+ ISGLGWI V
Sbjct: 321 KLVEHVF--TIKDKTDLVISGLGWIRV 345
>gi|422867666|ref|ZP_16914236.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX1467]
gi|329577181|gb|EGG58651.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX1467]
Length = 375
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 129/402 (32%), Positives = 195/402 (48%), Gaps = 50/402 (12%)
Query: 89 DKVLKVNSAVASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGH 148
++ +++ A+ C GCGA +QT GY +E K + V C RC L H +
Sbjct: 2 ERRIRMTEAI-HCIGCGAIIQTENPHELGYTPKTAFE---KGMETGEVYCQRCFRLRHYN 57
Query: 149 MITAVGGNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGA 208
I V Q D LR L+ L E ALIV +VDI DFNGS + + G
Sbjct: 58 DIQDV----------QLTDDDFLR-LLNGLGTEDALIVNVVDIFDFNGSLIPGLHRFIGD 106
Query: 209 NPIILVVTKVDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQK 268
NP++LV KVD+LPK + W+ E + L + V LTS K + + I+K
Sbjct: 107 NPVLLVGNKVDILPKSLKKPKMVQWMRERAHEAGLRPVDVLLTSGKKPQEMQELLDTIEK 166
Query: 269 EKKGRDVYILGSANVGKSAFINALLKK-MGERDPAAAMAQKYRPIQSAVPGTTLGPIQID 327
++GRDVY++G NVGKS +N ++++ +G +D S PGTTL I+I
Sbjct: 167 YREGRDVYVVGVTNVGKSTLVNQIIQQTVGVQDVITT---------SQFPGTTLDKIEI- 216
Query: 328 AFLGGGKLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGL 387
G L DTPG+ H+ A + +DL +APQ ++ + + + +E
Sbjct: 217 PLDDGHFLIDTPGIIHRHQMAHYLGKKDLKIIAPQKEIKPKVYQLNAEQ----------- 265
Query: 388 NGFTIFWGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGK 447
T+F GGL R D ++ ++ Y L ++ T AD FY+K +G L PP
Sbjct: 266 ---TLFLGGLARFDYVQG-AKSSFIAYVSNDLNLHRTKTATADAFYEKHVGGLLQPPRAD 321
Query: 448 QKAEGWKGLDRERLLEIKFEDTERPASDVAISGLGWISV-EP 488
+ AE + L ++FE + + +D+ +GLGWI+V EP
Sbjct: 322 EVAE-FPEL-------VRFEFSVKEKTDIVFAGLGWITVTEP 355
>gi|423395365|ref|ZP_17372566.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG2X1-1]
gi|423406240|ref|ZP_17383389.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG2X1-3]
gi|401654776|gb|EJS72315.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG2X1-1]
gi|401660234|gb|EJS77716.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG2X1-3]
Length = 368
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 124/426 (29%), Positives = 190/426 (44%), Gaps = 66/426 (15%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG +QT + GY + E ++ V+C RC L H + I V
Sbjct: 7 CIGCGVEIQTENKNEVGYAPTSSLEKEQ-------VICQRCFRLKHYNEIQDVS------ 53
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ L+ + + AL+VK+VDI DFNGS+L + G N ++LV K DL
Sbjct: 54 -----LTDDDFLRILNGIGKSDALVVKIVDIFDFNGSWLPGLHRFVGNNKVLLVGNKADL 108
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
+PK + V W+ + + L V L S+ GI +A I+ + G+DVY++G
Sbjct: 109 IPKSVKDDKVKHWMRYSAKQLGLKPEDVFLISAAKGQGIAELADAIEYYRDGKDVYVVGC 168
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS FIN ++K+ + + PGTTL I I LYDTPG
Sbjct: 169 TNVGKSTFINRMIKEFSDETENVITTSHF-------PGTTLDLIDI-PLDEESSLYDTPG 220
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ HH+ A V + L + P ++ F + E T+F+ GL R
Sbjct: 221 IINHHQMAHYVGKQSLKLITPTKEIKPMVFQLNEEQ--------------TLFFSGLARF 266
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D + T + L ++ +KADE Y+ G L+PP ++ A +
Sbjct: 267 DYVSG-GRRAFTCHFSNRLTIHRTKLEKADELYKNHAGDLLSPPTPEELA------NMPE 319
Query: 461 LLEIKFEDTERPASDVAISGLGWISV-EPVRRSIRNSDINLESTSGELHLAVHVPKPVEV 519
L++ +F + P +DV SGLGW++V EP + + HVPK V V
Sbjct: 320 LVKYEF-NIREPKTDVVFSGLGWVTVNEPGAK-----------------IVAHVPKGVSV 361
Query: 520 FVRNPM 525
+R +
Sbjct: 362 SLRKSL 367
>gi|417849907|ref|ZP_12495822.1| ribosome biogenesis GTPase YqeH [Streptococcus mitis SK1080]
gi|339455240|gb|EGP67847.1| ribosome biogenesis GTPase YqeH [Streptococcus mitis SK1080]
Length = 368
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 119/387 (30%), Positives = 192/387 (49%), Gaps = 48/387 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT++ G+ E K + V C RC L H + IT V
Sbjct: 6 CIGCGATIQTTDKAGLGFTPQSALE---KGLETGEVYCQRCFRLRHYNEITDVQ------ 56
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ + L + AL+V ++DI DFNGS + + N ++LV K D+
Sbjct: 57 -----LTDDDFLKLLHEVGDSDALVVNVIDIFDFNGSVIPGLPRFVSGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W++E ++ L + V LTS+++ I V +I+ +KGRDVY++G
Sbjct: 112 LPKSVKPGKISQWLMERAHEEGLRPVDVVLTSAQNKHAIKEVIDKIEHYRKGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G+++ S PGTTL I+I G +YDTP
Sbjct: 172 TNVGKSTLINAIIQEITGDQNVITT---------SRFPGTTLDKIEI-PLDDGSYIYDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + A++L ++P+ ++ +++ + SE T+F GGL R
Sbjct: 222 GIIHRHQMAHYLTAKNLKYVSPKKEIKPKTYQLNSEQ--------------TLFLGGLGR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + F+ L+++ + A FY K +G LTPP K+K D
Sbjct: 268 FDFIAGEKQGFTAFF-DNELKLHRTKLEGASAFYDKHVGTLLTPPNSKEKE------DFP 320
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
+L++ F E+ +D+ ISGLGWI V
Sbjct: 321 KLVQHVFNIKEK--TDLVISGLGWIRV 345
>gi|239632052|ref|ZP_04675083.1| nitric-oxide synthase [Lactobacillus paracasei subsp. paracasei
8700:2]
gi|239526517|gb|EEQ65518.1| nitric-oxide synthase [Lactobacillus paracasei subsp. paracasei
8700:2]
Length = 374
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 121/387 (31%), Positives = 185/387 (47%), Gaps = 48/387 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA LQT++ PGY+ T K + C RC L H + I V
Sbjct: 12 CIGCGAILQTTDPKKPGYLPKATLS---KADPDDEIYCQRCFRLRHYNEIAPVT------ 62
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ L+ + ALIV ++DI DFNGS + + G NP+ILV K D+
Sbjct: 63 -----LTDDDFLRLLNAIGESNALIVNVIDIFDFNGSVIPGLHRFVGDNPVILVGNKADV 117
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + N + +W+ + + L ++ L S+K G+ + I++ + RDVY++G
Sbjct: 118 LPKSLNPNRLKNWLQQQAKAQGLRPVATMLASAKKGFGVDELLDAIEQYRDHRDVYVVGV 177
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
N GKS IN ++K++ G D S PGTTL I I G L DTP
Sbjct: 178 TNTGKSTLINRIIKELTGVEDLITT---------SRFPGTTLDRIMI-PLDDGQSLIDTP 227
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A V +DL ++P S ++ ++ + NE G TIF GGL +
Sbjct: 228 GIIHRHQMAHFVGPKDLKLVSPTSVIKPATYQL-------NE-------GQTIFLGGLAQ 273
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D L+ Y L ++ + AD+FYQK +G L+PP + + + L
Sbjct: 274 FDYLRG-GRNSFVIYTDNQLTLHRTKLENADDFYQKHVGGLLSPPQADEVPD-FPPL--- 328
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
++FE T + +D+ +GLGWI+V
Sbjct: 329 ----VRFEFTPKEKADLVFAGLGWITV 351
>gi|295693368|ref|YP_003601978.1| GTP-binding protein [Lactobacillus crispatus ST1]
gi|295031474|emb|CBL50953.1| GTP-binding protein [Lactobacillus crispatus ST1]
Length = 369
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 120/386 (31%), Positives = 183/386 (47%), Gaps = 46/386 (11%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA LQ+ + GY+ P + K K + V C RC L H + I V N
Sbjct: 7 CIGCGAVLQSDDPKKAGYL-PKSALDKAKSEENTDVYCQRCFRLRHYNEIMPVDLNN--- 62
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
D+ L+ L +KAL+V +VD+ DF+ S L+ ++ G N ILV K DL
Sbjct: 63 --------DDFLALLNSLSEKKALVVNVVDLFDFSNSLLSSLKRFVGNNDFILVGNKFDL 114
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
PK + + + DW+ + + L + L S+K + + + I K+ + +DVY +G+
Sbjct: 115 FPKNSRQSKIKDWMRQEANRMGLYPKEIFLVSAKRKVNLESLIAYINKQSQDKDVYFVGT 174
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS INA++ MG+ S PGTTL I+I G L DTPG
Sbjct: 175 TNVGKSTLINAIIDMMGDIQDLIT--------TSRFPGTTLDRIEI-PLENGHFLIDTPG 225
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ ++ A ++A++L ++P+ L+ ++ ++ G T+F GL RI
Sbjct: 226 IMTDNQLATHLNAKNLELISPKKPLKPATYQLMP--------------GNTLFLAGLGRI 271
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D LK T T Y + + V+ T AD FY+K +G L PP K KG +E
Sbjct: 272 DYLKG-ESTSFTVYVARGMYVHRTKTANADAFYEKHVGELLAPPAKDDKLPALKG--QEY 328
Query: 461 LLEIKFEDTERPASDVAISGLGWISV 486
E K SD+ G+G+++V
Sbjct: 329 RTEYK--------SDLLFGGIGFVTV 346
>gi|373859118|ref|ZP_09601850.1| ribosome biogenesis GTPase YqeH [Bacillus sp. 1NLA3E]
gi|372451209|gb|EHP24688.1| ribosome biogenesis GTPase YqeH [Bacillus sp. 1NLA3E]
Length = 367
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 129/427 (30%), Positives = 196/427 (45%), Gaps = 69/427 (16%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG +QT + D G+ E + T++C RC L + + + V
Sbjct: 7 CIGCGVKIQTEQPDELGFAPKSALEKE-------TIICQRCFRLKNYNEVQDV------- 52
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ + L+ + + ALIVK+VDI DFNGS+L + G N I+L+ KVDL
Sbjct: 53 ----HLTDDDFLKILNEIGTKDALIVKIVDIFDFNGSWLPGLHRFVGNNKILLIGNKVDL 108
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W+ ++ L V L S+ I + I+K + G+DVY++G
Sbjct: 109 LPKSVKPAKLIHWMKHEAKEQGLKPEDVFLVSAARGQFIQEAVAAIEKHRDGKDVYVVGC 168
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS FIN ++K+ G D S PGTTL I+I G L DTP
Sbjct: 169 TNVGKSTFINRVIKEFSGGEDVITT---------SHFPGTTLDIIEI-PLSDGKALIDTP 218
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ HH+ A + DL + P+ ++ + + V NE G T+F+GGL R
Sbjct: 219 GIINHHQMAHFIDKRDLKFITPKKEIKPKIYQV-------NE-------GQTLFFGGLAR 264
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D L Y L ++ +KADE YQ +G LTPP K+ + + L R
Sbjct: 265 FDYLSG-GRRSFVCYISNELGIHRTKIEKADELYQNHVGEMLTPP-RKEGLDEFPELVRH 322
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV-EPVRRSIRNSDINLESTSGELHLAVHVPKPVE 518
+ + +DV SGLGW+++ +P + +A +VPK V+
Sbjct: 323 EFM------IKEGKTDVVFSGLGWVTINDPGAK-----------------VAAYVPKGVQ 359
Query: 519 VFVRNPM 525
V +R +
Sbjct: 360 VMIRKSL 366
>gi|312110147|ref|YP_003988463.1| ribosome biogenesis GTPase YqeH [Geobacillus sp. Y4.1MC1]
gi|311215248|gb|ADP73852.1| ribosome biogenesis GTPase YqeH [Geobacillus sp. Y4.1MC1]
Length = 367
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 118/389 (30%), Positives = 187/389 (48%), Gaps = 50/389 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +Q+ + PGY E ++ V+C RC L H + + V
Sbjct: 7 CIGCGAIIQSEDETKPGYAPKSVLEKEE-------VICQRCFRLKHYNEVQDVE------ 53
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ + L + + +AL+VK+VDI DFNGS+L + NPI+LV K DL
Sbjct: 54 -----LTDDDFLKILHSIGQSEALVVKIVDIFDFNGSWLPGLHRFVANNPILLVGNKADL 108
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + + W+ + L + + L S+ GI I+K + G++VY++G
Sbjct: 109 LPKSVKYTKLIHWMAQMANDLGLKPVDICLVSAVKGIGIAKAMEAIEKHRLGKNVYVVGC 168
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS FIN ++++ + S PGTTL I+I G LYDTPG
Sbjct: 169 TNVGKSTFINRIIQETTGKGNVITT--------SYFPGTTLDIIEI-PLDDGAALYDTPG 219
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ HH+ A V +DL + P+ + + + + NE + T+F+GGL R+
Sbjct: 220 IINHHQMAHFVDKKDLKIITPKREIHPKVYQL-------NEQQ-------TLFFGGLARL 265
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D +K + + ++ L ++ +KAD Y K+ G L+PP K + +
Sbjct: 266 DYIKGGRRSFVCYFA-NELPIHRTKLEKADALYAKQFGELLSPP-SKHYIDQF-----PP 318
Query: 461 LLEIKFEDTERPASDVAISGLGWISV-EP 488
L+ F ER +D+ SGLGW++ EP
Sbjct: 319 LVAHTFTIKER-KTDIVFSGLGWVTCNEP 346
>gi|304384686|ref|ZP_07367032.1| ribosome biogenesis GTPase YqeH [Pediococcus acidilactici DSM
20284]
gi|304328880|gb|EFL96100.1| ribosome biogenesis GTPase YqeH [Pediococcus acidilactici DSM
20284]
Length = 369
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 121/394 (30%), Positives = 183/394 (46%), Gaps = 49/394 (12%)
Query: 94 VNSAVASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAV 153
+N C GCGA LQT ++ PGY KK + + C RC L H + I V
Sbjct: 1 MNEEEIRCIGCGATLQTEDAQLPGYTPASAL---KKGLESGQLYCQRCFRLRHYNEIAPV 57
Query: 154 GGNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIIL 213
+S D+ R+ LS + +L+V +VD+ DFNGS + + G NP++L
Sbjct: 58 S-----------ISDDDFRKLLSQISDSDSLVVYVVDMFDFNGSLIPGLHRFVGDNPVLL 106
Query: 214 VVTKVDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGR 273
V K D+ PK + + +W+ + + + V +TS+K + + +I++ + GR
Sbjct: 107 VGNKADVFPKSIKRHRMREWLRQQAKANGIEPVDVMITSAKQRPAVEQLFDKIEQLRDGR 166
Query: 274 DVYILGSANVGKSAFINALLK-KMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGG 332
DVY++G NVGKS IN+L+ + G +D S PGTTL I+I F
Sbjct: 167 DVYVVGVTNVGKSTLINSLIALRNGIKDVITT---------SRFPGTTLDRIEI-PFDDH 216
Query: 333 GKLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTI 392
K+ DTPG+ + + A V+ AEDL ++P+ ++ + + + E T+
Sbjct: 217 SKMIDTPGIVHNDQMAHVLTAEDLKYISPKKTIKPRVYQLGDEQ--------------TL 262
Query: 393 FWGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEG 452
F G L R D +T Y +L ++ AD FY+K G LTPP AE
Sbjct: 263 FAGALARFDYEN--STGSVTAYFDNNLMIHRTKLANADHFYEKHAGELLTPP----AAEN 316
Query: 453 WKGLDRERLLEIKFEDTERPASDVAISGLGWISV 486
L K E+ SDV GLGWI+V
Sbjct: 317 LANLPELARHHFKIEED----SDVVFEGLGWIAV 346
>gi|293556693|ref|ZP_06675257.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1039]
gi|291601155|gb|EFF31443.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1039]
Length = 369
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 122/387 (31%), Positives = 182/387 (47%), Gaps = 46/387 (11%)
Query: 100 SCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGY 159
C GCGA +QT++ GY E K V C RC L H + I V
Sbjct: 6 QCIGCGAVIQTNKPGELGYTPQTALE---KGLASGEVYCQRCFRLRHYNEIQDVS----- 57
Query: 160 AGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVD 219
++ D+ L+ L ++ ALIV +VDI DFNGS + + G NP++LV KVD
Sbjct: 58 ------LTDDDFLRLLNELGQKDALIVNVVDIFDFNGSLIPGLHRFVGDNPVLLVGNKVD 111
Query: 220 LLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILG 279
+LPK + W+ E + + + V LTS+K + + +I++ + GRDVYI+G
Sbjct: 112 ILPKSLKKTKLTQWMKERAYEAGIRPVDVLLTSAKKSHEMTELLEKIEEYRDGRDVYIVG 171
Query: 280 SANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS IN ++K +Q PGTTL I+I G L DTP
Sbjct: 172 VTNVGKSTLINQIIKNTAGVQDVITTSQ--------FPGTTLDKIEI-PLDDGHFLIDTP 222
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + +DL +AP ++ + + + NE G T+F GGL R
Sbjct: 223 GIIHRHQMAHYLGKKDLRIIAPLKEIKPKVYQM-------NE-------GQTLFLGGLAR 268
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + Y + ++ +KADEFYQK +G L PP + E + L
Sbjct: 269 FDFISG-NRASFIAYVSNDVNIHRTKLEKADEFYQKHVGGLLQPP-RPDEVEAFPEL--- 323
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
++FE + + +D+ +GLGWI+V
Sbjct: 324 ----VRFEFSVKEKTDIVFAGLGWITV 346
>gi|227550575|ref|ZP_03980624.1| GTP-binding protein [Enterococcus faecium TX1330]
gi|257888600|ref|ZP_05668253.1| GTP-binding protein YqeH [Enterococcus faecium 1,141,733]
gi|257897022|ref|ZP_05676675.1| GTP-binding protein YqeH [Enterococcus faecium Com12]
gi|257898963|ref|ZP_05678616.1| GTP-binding protein YqeH [Enterococcus faecium Com15]
gi|293378715|ref|ZP_06624873.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium PC4.1]
gi|424763232|ref|ZP_18190711.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium TX1337RF]
gi|425055202|ref|ZP_18458687.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium 505]
gi|431030888|ref|ZP_19490597.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1590]
gi|431595404|ref|ZP_19522164.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1861]
gi|431751398|ref|ZP_19540088.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E2620]
gi|431758519|ref|ZP_19547146.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E3083]
gi|431763994|ref|ZP_19552541.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E3548]
gi|227180283|gb|EEI61255.1| GTP-binding protein [Enterococcus faecium TX1330]
gi|257824654|gb|EEV51586.1| GTP-binding protein YqeH [Enterococcus faecium 1,141,733]
gi|257833587|gb|EEV60008.1| GTP-binding protein YqeH [Enterococcus faecium Com12]
gi|257836875|gb|EEV61949.1| GTP-binding protein YqeH [Enterococcus faecium Com15]
gi|292642643|gb|EFF60795.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium PC4.1]
gi|402423043|gb|EJV55263.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium TX1337RF]
gi|403034406|gb|EJY45858.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium 505]
gi|430565063|gb|ELB04233.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1590]
gi|430590638|gb|ELB28694.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1861]
gi|430615514|gb|ELB52463.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E2620]
gi|430617577|gb|ELB54450.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E3083]
gi|430621450|gb|ELB58212.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E3548]
Length = 369
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 123/387 (31%), Positives = 182/387 (47%), Gaps = 46/387 (11%)
Query: 100 SCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGY 159
C GCGA +QTS+ GY E K V C RC L H + I V
Sbjct: 6 QCIGCGAVIQTSKPGELGYTPQTALE---KGLASGEVYCQRCFRLRHYNEIQDVS----- 57
Query: 160 AGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVD 219
++ D+ L+ L ++ ALIV +VDI DFNGS + + G NP++LV KVD
Sbjct: 58 ------LTDDDFLRLLNELGQKDALIVNVVDIFDFNGSLIPGLHRFVGDNPVLLVGNKVD 111
Query: 220 LLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILG 279
+LPK + W+ E + + + V LTS+K + + +I++ + GRDVYI+G
Sbjct: 112 ILPKSLKKPKLTQWMKERAHEAGIRPVDVLLTSAKKSHEMTELLEKIEEYRDGRDVYIVG 171
Query: 280 SANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS IN ++K +Q PGTTL I+I G L DTP
Sbjct: 172 VTNVGKSTLINQIIKNTAGVQDVITTSQ--------FPGTTLDKIEI-PLDDGHFLIDTP 222
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + +DL +AP ++ + + + NE G T+F GGL R
Sbjct: 223 GIIHRHQMAHYLGKKDLRIIAPLKEIKPKVYQL-------NE-------GQTLFLGGLAR 268
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + Y + ++ +KADEFYQK +G L PP + E + L
Sbjct: 269 FDFISG-NRASFIAYVSNDVNIHRTKLEKADEFYQKHVGGLLQPP-RPDEVEAFPEL--- 323
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
++FE + + +D+ +GLGWI+V
Sbjct: 324 ----VRFEFSVKEKTDIVFAGLGWITV 346
>gi|418068958|ref|ZP_12706238.1| GTPase YqeH [Pediococcus acidilactici MA18/5M]
gi|357537691|gb|EHJ21714.1| GTPase YqeH [Pediococcus acidilactici MA18/5M]
Length = 369
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 121/394 (30%), Positives = 183/394 (46%), Gaps = 49/394 (12%)
Query: 94 VNSAVASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAV 153
+N C GCGA LQT ++ PGY KK + + C RC L H + I V
Sbjct: 1 MNEEEIRCIGCGATLQTEDAQLPGYTPASAL---KKGLESGQLYCQRCFRLRHYNEIAPV 57
Query: 154 GGNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIIL 213
+S D+ R+ LS + +L+V +VD+ DFNGS + + G NP++L
Sbjct: 58 S-----------ISDDDFRKLLSQISDSDSLVVYVVDMFDFNGSLIPGLHRFVGDNPVLL 106
Query: 214 VVTKVDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGR 273
V K D+ PK + + +W+ + + + V +TS+K + + +I++ + GR
Sbjct: 107 VGNKADVFPKSIKRHRMREWLRQQAKANGIEPVDVMITSAKQRPAVEQLFDKIEQLRDGR 166
Query: 274 DVYILGSANVGKSAFINALLK-KMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGG 332
DVY++G NVGKS IN+L+ + G +D S PGTTL I+I F
Sbjct: 167 DVYVVGVTNVGKSTLINSLIALRNGIKDVITT---------SRFPGTTLDRIEI-PFDDH 216
Query: 333 GKLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTI 392
K+ DTPG+ + + A V+ AEDL ++P+ ++ + + + E T+
Sbjct: 217 SKMIDTPGIVHNDQMAHVLTAEDLKYISPKKTIKPRVYQLGDEQ--------------TL 262
Query: 393 FWGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEG 452
F G L R D +T Y +L ++ AD FY+K G LTPP AE
Sbjct: 263 FAGALARFDYEN--STGSVTAYFDNNLMIHRTKLANADHFYEKHAGELLTPP----AAEN 316
Query: 453 WKGLDRERLLEIKFEDTERPASDVAISGLGWISV 486
L K E+ SDV GLGWI+V
Sbjct: 317 LANLPELARHHFKIEED----SDVVFEGLGWIAV 346
>gi|293569277|ref|ZP_06680575.1| nitric-oxide synthase [Enterococcus faecium E1071]
gi|406579805|ref|ZP_11055032.1| GTPase YqeH [Enterococcus sp. GMD4E]
gi|406582233|ref|ZP_11057362.1| GTPase YqeH [Enterococcus sp. GMD3E]
gi|406584274|ref|ZP_11059308.1| GTPase YqeH [Enterococcus sp. GMD2E]
gi|406589173|ref|ZP_11063616.1| GTPase YqeH [Enterococcus sp. GMD1E]
gi|410936072|ref|ZP_11367943.1| GTPase YqeH [Enterococcus sp. GMD5E]
gi|425057709|ref|ZP_18461115.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium 504]
gi|430824166|ref|ZP_19442733.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E0120]
gi|430844678|ref|ZP_19462575.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1050]
gi|430867479|ref|ZP_19482473.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1574]
gi|431235846|ref|ZP_19503129.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1622]
gi|431382667|ref|ZP_19511260.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1627]
gi|431446124|ref|ZP_19513806.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1630]
gi|431523905|ref|ZP_19516930.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1634]
gi|431743338|ref|ZP_19532218.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E2071]
gi|431760682|ref|ZP_19549279.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E3346]
gi|447912726|ref|YP_007394138.1| GTP-binding protein YqeH, required for biogenesis of 30S ribosome
subunit [Enterococcus faecium NRRL B-2354]
gi|291587983|gb|EFF19833.1| nitric-oxide synthase [Enterococcus faecium E1071]
gi|403040021|gb|EJY51128.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium 504]
gi|404455024|gb|EKA01896.1| GTPase YqeH [Enterococcus sp. GMD4E]
gi|404458385|gb|EKA04819.1| GTPase YqeH [Enterococcus sp. GMD3E]
gi|404464320|gb|EKA09868.1| GTPase YqeH [Enterococcus sp. GMD2E]
gi|404471251|gb|EKA15801.1| GTPase YqeH [Enterococcus sp. GMD1E]
gi|410735535|gb|EKQ77445.1| GTPase YqeH [Enterococcus sp. GMD5E]
gi|430441550|gb|ELA51647.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E0120]
gi|430496109|gb|ELA72214.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1050]
gi|430550490|gb|ELA90286.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1574]
gi|430572783|gb|ELB11629.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1622]
gi|430581038|gb|ELB19485.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1627]
gi|430584863|gb|ELB23177.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1634]
gi|430585768|gb|ELB24040.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1630]
gi|430607172|gb|ELB44500.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E2071]
gi|430623767|gb|ELB60445.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E3346]
gi|445188435|gb|AGE30077.1| GTP-binding protein YqeH, required for biogenesis of 30S ribosome
subunit [Enterococcus faecium NRRL B-2354]
Length = 369
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 122/387 (31%), Positives = 182/387 (47%), Gaps = 46/387 (11%)
Query: 100 SCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGY 159
C GCGA +QT++ GY E K V C RC L H + I V
Sbjct: 6 QCIGCGAVIQTNKPGELGYTPQTALE---KGLASGEVYCQRCFRLRHYNEIQDVS----- 57
Query: 160 AGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVD 219
++ D+ L+ L ++ ALIV +VDI DFNGS + + G NP++LV KVD
Sbjct: 58 ------LTDDDFLRLLNELGQKDALIVNVVDIFDFNGSLIPGLHRFVGDNPVLLVGNKVD 111
Query: 220 LLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILG 279
+LPK + W+ E + + + V LTS+K + + +I++ + GRDVYI+G
Sbjct: 112 ILPKSLKKTKLTQWMKERAYEAGIRPVDVLLTSAKKSHEMTELLEKIEEYRDGRDVYIVG 171
Query: 280 SANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS IN ++K +Q PGTTL I+I G L DTP
Sbjct: 172 VTNVGKSTLINQIIKNTAGVQDVITTSQ--------FPGTTLDKIEI-PLDDGHFLIDTP 222
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + +DL +AP ++ + + + NE G T+F GGL R
Sbjct: 223 GIIHRHQMAHYLGKKDLRIIAPLKEIKPKVYQL-------NE-------GQTLFLGGLAR 268
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + Y + ++ +KADEFYQK +G L PP + E + L
Sbjct: 269 FDFISG-NRASFIAYVSNDVNIHRTKLEKADEFYQKHVGGLLQPP-RPDEVEAFPEL--- 323
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
++FE + + +D+ +GLGWI+V
Sbjct: 324 ----VRFEFSVKEKTDIVFAGLGWITV 346
>gi|94993651|ref|YP_601749.1| GTP-binding protein YqeH [Streptococcus pyogenes MGAS10750]
gi|94547159|gb|ABF37205.1| GTP-binding protein [Streptococcus pyogenes MGAS10750]
Length = 372
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 118/393 (30%), Positives = 186/393 (47%), Gaps = 48/393 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG +QT + + G+ KK + + C RC L H + IT V
Sbjct: 6 CIGCGIQIQTEDKEKAGFTPAAAL---KKGMETGELYCQRCFRLRHYNEITDV------- 55
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ DE L + AL+V ++DI DFNGS + + N ++LV K D+
Sbjct: 56 ----HITDDEFLRLLHEVGDSDALVVNVIDIFDFNGSIIPGLSRFISGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK V W+ E ++ L L V LTS+++ I + I + + GRDVY++G
Sbjct: 112 LPKSVKDGKVTQWLTERAHEEGLRPLDVMLTSAQNKYAIKDLIERINELRNGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G++D S PGTTL I+I G ++DTP
Sbjct: 172 TNVGKSTLINAIIQEITGDKDVITT---------SRFPGTTLDKIEI-PLDDGSFIFDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + ++L ++P+ ++ +++ + SE T+F GGL R
Sbjct: 222 GIIHRHQMAHYLSPKELKIVSPKKEIKPKTYQLNSEQ--------------TLFLGGLSR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + F+ L+++ D AD FY K +G LTPP GK++ + L
Sbjct: 268 FDFINGERQGFTAFF-DNQLELHRTKLDGADAFYDKHVGTLLTPP-GKKELTAFPKL--- 322
Query: 460 RLLEIKFEDTERPASDVAISGLGWISVEPVRRS 492
++ E T D+ SGLGWI V + S
Sbjct: 323 ----VRHEFTIDQKMDIVFSGLGWIRVNGQKDS 351
>gi|259047030|ref|ZP_05737431.1| ribosome biogenesis protein GTPase YqeH [Granulicatella adiacens
ATCC 49175]
gi|259036349|gb|EEW37604.1| ribosome biogenesis protein GTPase YqeH [Granulicatella adiacens
ATCC 49175]
Length = 375
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 118/390 (30%), Positives = 185/390 (47%), Gaps = 51/390 (13%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRC-RLLSHGHMITAVGGNGGY 159
C GCGA +QT + GY P + L K + C RC RL ++ + A
Sbjct: 12 CIGCGATIQTEDPKGTGYT-PQS-ALNKMLESECPLYCQRCFRLRNYNELQPAS------ 63
Query: 160 AGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVD 219
++ D+ + LS + E AL+V +VD+ D GS ++ ++ G NPI+ V KVD
Sbjct: 64 ------LTDDDFLKMLSSIADEDALVVFVVDLFDLYGSMISGLKRFVGDNPILFVANKVD 117
Query: 220 LLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILG 279
L PK + N + W+ + + + L S I + +I + +KG+D Y++G
Sbjct: 118 LYPKSVNRNRLKAWIERHAKEYGIKPVDTLLVSGHKRIQIDELLEKINEYRKGKDAYVVG 177
Query: 280 SANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS IN L++ +GE +Q PGTTLG I I F L DTP
Sbjct: 178 VTNVGKSTLINKLIQSIGETGEVITTSQ--------YPGTTLGQIDI-PFDEHSSLVDTP 228
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ + +++ + PQ L+ ++F + SE TIF GGL+R
Sbjct: 229 GIIHRHQITHYLAEKEMKKVLPQKELQPKTFQLNSEQ--------------TIFIGGLIR 274
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
+D + TFY P+++ ++ +KA EFY K G LTPP G D
Sbjct: 275 VDYEQG-ERNSFTFYTPQTIDLHRTKLEKATEFYAKHAGTLLTPPTG----------DNM 323
Query: 460 RLLE--IKFEDTERPASDVAISGLGWISVE 487
+L +K T + +D+ I+GLGW++++
Sbjct: 324 KLYPKLVKKTFTIKEKTDLVIAGLGWVTIQ 353
>gi|227519403|ref|ZP_03949452.1| GTP-binding protein [Enterococcus faecalis TX0104]
gi|424678029|ref|ZP_18114874.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis ERV103]
gi|424679267|ref|ZP_18116094.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis ERV116]
gi|424682894|ref|ZP_18119652.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis ERV129]
gi|424686799|ref|ZP_18123464.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis ERV25]
gi|424692181|ref|ZP_18128694.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis ERV31]
gi|424692416|ref|ZP_18128905.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis ERV37]
gi|424696110|ref|ZP_18132475.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis ERV41]
gi|424699535|ref|ZP_18135748.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis ERV62]
gi|424704721|ref|ZP_18140815.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis ERV63]
gi|424706899|ref|ZP_18142894.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis ERV65]
gi|424717576|ref|ZP_18146858.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis ERV68]
gi|424720418|ref|ZP_18149521.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis ERV72]
gi|424726104|ref|ZP_18154788.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis ERV73]
gi|424734049|ref|ZP_18162599.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis ERV81]
gi|424738078|ref|ZP_18166523.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis ERV85]
gi|424755413|ref|ZP_18183290.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis ERV93]
gi|227073157|gb|EEI11120.1| GTP-binding protein [Enterococcus faecalis TX0104]
gi|402352576|gb|EJU87421.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis ERV103]
gi|402357395|gb|EJU92105.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis ERV116]
gi|402360424|gb|EJU95024.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis ERV31]
gi|402366220|gb|EJV00614.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis ERV129]
gi|402366736|gb|EJV01097.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis ERV25]
gi|402375829|gb|EJV09800.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis ERV62]
gi|402378146|gb|EJV12025.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis ERV37]
gi|402378563|gb|EJV12405.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis ERV41]
gi|402381158|gb|EJV14871.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis ERV63]
gi|402384280|gb|EJV17839.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis ERV68]
gi|402386585|gb|EJV20090.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis ERV65]
gi|402389753|gb|EJV23138.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis ERV73]
gi|402390667|gb|EJV23996.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis ERV81]
gi|402393490|gb|EJV26714.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis ERV72]
gi|402400961|gb|EJV33765.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis ERV93]
gi|402403484|gb|EJV36151.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis ERV85]
Length = 369
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 129/390 (33%), Positives = 188/390 (48%), Gaps = 49/390 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT GY +E K + V C RC L H + I V
Sbjct: 7 CIGCGAIIQTENPHELGYTPKTAFE---KGMETGEVYCQRCFRLRHYNDIQDV------- 56
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
Q D LR L+ L E ALIV +VDI DFNGS + + G NP++LV KVD+
Sbjct: 57 ---QLTDDDFLR-LLNGLGTEDALIVNVVDIFDFNGSLIPGLHRFIGDNPVLLVGNKVDI 112
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W+ E + L + V LTS K + + I+K ++GRDVY++G
Sbjct: 113 LPKSLKKPKMVQWMRERAHEAGLRPVDVLLTSGKKPQEMQELLDTIEKYREGRDVYVVGV 172
Query: 281 ANVGKSAFINALLKK-MGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS IN ++++ +G +D S PGTTL I+I G L DTP
Sbjct: 173 TNVGKSTLINQIIQQTVGVQDVITT---------SQFPGTTLDKIEI-PLDDGHFLIDTP 222
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + +DL +APQ ++ + + + +E T+F GGL R
Sbjct: 223 GIIHRHQMAHYLGKKDLKIIAPQKEIKPKVYQLNAEQ--------------TLFLGGLAR 268
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D ++ ++ Y L ++ T AD FY+K +G L PP + AE + L
Sbjct: 269 FDYVQG-AKSSFIAYVSNDLNLHRTKTATADAFYEKHVGGLLQPPRTDEVAE-FPEL--- 323
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV-EP 488
++FE + + +D+ +GLGWI+V EP
Sbjct: 324 ----VRFEFSVKEKTDIVFAGLGWITVTEP 349
>gi|417937776|ref|ZP_12581076.1| ribosome biogenesis GTPase YqeH [Streptococcus infantis SK970]
gi|343392040|gb|EGV04613.1| ribosome biogenesis GTPase YqeH [Streptococcus infantis SK970]
Length = 368
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 119/387 (30%), Positives = 191/387 (49%), Gaps = 48/387 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT++ G+ E K + V C RC L H + IT V
Sbjct: 6 CIGCGATIQTTDKAGLGFTPQSALE---KGLETGEVYCQRCFRLRHYNEITDVQ------ 56
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ + L + AL+V ++DI DFNGS + + N ++LV K D+
Sbjct: 57 -----LTDDDFLKLLHEVGDSDALVVNVIDIFDFNGSVIPGLTRFVSGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W++E ++ L + V LTS+++ I V +I+ +KGRDVY++G
Sbjct: 112 LPKSVKPGKISQWLMERAHEEGLRPVDVVLTSAQNKHAIKEVIDKIEHYRKGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G+++ S PGTTL I+I G +YDTP
Sbjct: 172 TNVGKSTLINAIIQEITGDQNVITT---------SRFPGTTLDKIEI-PLDDGSYIYDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + A++L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLTAKNLKYVSPKKEIKPKTYQLNPEQ--------------TLFLGGLGR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + F+ L+++ + A FY K LG LTPP K+K D
Sbjct: 268 FDFISGEKQGFTAFF-DNELKLHRTKLEGASAFYDKHLGTLLTPPNSKEKE------DFP 320
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
+L++ F T + +D+ ISGLGWI V
Sbjct: 321 KLVQHVF--TIKDKTDLVISGLGWIRV 345
>gi|430827026|ref|ZP_19445194.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E0164]
gi|431765842|ref|ZP_19554343.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E4215]
gi|430444572|gb|ELA54410.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E0164]
gi|430627559|gb|ELB64050.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E4215]
Length = 369
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 122/387 (31%), Positives = 182/387 (47%), Gaps = 46/387 (11%)
Query: 100 SCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGY 159
C GCGA +QT++ GY E K V C RC L H + I V
Sbjct: 6 QCIGCGAVIQTNKPGELGYTPQTALE---KGLASGEVYCQRCFRLRHYNEIQDVS----- 57
Query: 160 AGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVD 219
++ D+ L+ L ++ ALIV +VDI DFNGS + + G NP++LV KVD
Sbjct: 58 ------LTDDDFLRLLNELGQKDALIVNVVDIFDFNGSLIPGLHRFVGDNPVLLVGNKVD 111
Query: 220 LLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILG 279
+LPK + W+ E + + + V LTS+K + + +I++ + GRDVYI+G
Sbjct: 112 ILPKSLKKTKLTQWMKERAYEAGIRPVDVLLTSAKKSHEMTELLEKIEEYRDGRDVYIVG 171
Query: 280 SANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS IN ++K +Q PGTTL I+I G L DTP
Sbjct: 172 VTNVGKSTLINQIIKNTAGVQDVITTSQ--------FPGTTLDKIEI-PLDDGHFLIDTP 222
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + +DL +AP ++ + + + NE G T+F GGL R
Sbjct: 223 GIIHRHQMAHYLGKKDLRIIAPLKEIKPKVYQL-------NE-------GQTLFLGGLAR 268
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + Y + ++ +KADEFYQK +G L PP + E + L
Sbjct: 269 FDFISG-NRASFIAYVSNDVNIHRTKLEKADEFYQKHIGGLLQPP-RPNEVEEFPEL--- 323
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
++FE + + +D+ +GLGWI+V
Sbjct: 324 ----VRFEFSVKEKTDIVFAGLGWITV 346
>gi|419460561|ref|ZP_14000489.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA02270]
gi|379530697|gb|EHY95936.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA02270]
Length = 368
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 120/392 (30%), Positives = 193/392 (49%), Gaps = 48/392 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT++ G+ E K + V C RC L H + IT V
Sbjct: 6 CIGCGATIQTTDKAGLGFTPQSALE---KGLETGEVYCQRCFRLRHYNEITDVQ------ 56
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ + L + AL+V ++DI DFNGS + + N ++LV K D+
Sbjct: 57 -----LTDDDFLKLLHEVGDSDALVVNVIDIFDFNGSVIPGLPRFVSGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W++E ++ L + V LTS+++ I V +I+ +KGRDVY++G
Sbjct: 112 LPKSVKPGKISQWLMERAHEEGLRPVDVVLTSAQNKHAIKEVIDKIEHYRKGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G+++ S PGTTL I+I G +YDTP
Sbjct: 172 TNVGKSTLINAIIQEITGDQNVITT---------SRFPGTTLDKIEI-PLDDGSYIYDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + A++L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLTAKNLKYVSPKKEIKPKTYQLNPEQ--------------TLFLGGLGR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + F+ L+++ + A FY K LG LTPP K+K D
Sbjct: 268 FDFIAGEKQGFTAFF-DNELKLHRSKLEGASAFYDKHLGTLLTPPNSKEKE------DFP 320
Query: 460 RLLEIKFEDTERPASDVAISGLGWISVEPVRR 491
RL++ F T + +D+ ISGLGWI V + +
Sbjct: 321 RLVQHVF--TIKDKTDLVISGLGWIRVTGIAK 350
>gi|69245736|ref|ZP_00603602.1| GTP-binding protein, HSR1-related [Enterococcus faecium DO]
gi|257880239|ref|ZP_05659892.1| GTP-binding protein YqeH [Enterococcus faecium 1,230,933]
gi|257885285|ref|ZP_05664938.1| GTP-binding protein YqeH [Enterococcus faecium 1,231,501]
gi|257891377|ref|ZP_05671030.1| GTP-binding protein YqeH [Enterococcus faecium 1,231,410]
gi|257893626|ref|ZP_05673279.1| GTP-binding protein YqeH [Enterococcus faecium 1,231,408]
gi|260560463|ref|ZP_05832637.1| GTP-binding protein YqeH [Enterococcus faecium C68]
gi|261208980|ref|ZP_05923385.1| GTP-binding protein YqeH [Enterococcus faecium TC 6]
gi|289565208|ref|ZP_06445660.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium D344SRF]
gi|293563281|ref|ZP_06677731.1| nitric-oxide synthase [Enterococcus faecium E1162]
gi|294619096|ref|ZP_06698591.1| nitric-oxide synthase [Enterococcus faecium E1679]
gi|314939219|ref|ZP_07846473.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium TX0133a04]
gi|314942037|ref|ZP_07848895.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium TX0133C]
gi|314948390|ref|ZP_07851779.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium TX0082]
gi|314951244|ref|ZP_07854299.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium TX0133A]
gi|314991667|ref|ZP_07857137.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium TX0133B]
gi|314996793|ref|ZP_07861806.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium TX0133a01]
gi|383328631|ref|YP_005354515.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium Aus0004]
gi|389868163|ref|YP_006375586.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium DO]
gi|415896213|ref|ZP_11550763.1| nitric-oxide synthase [Enterococcus faecium E4453]
gi|416138301|ref|ZP_11599017.1| nitric-oxide synthase [Enterococcus faecium E4452]
gi|424793013|ref|ZP_18219180.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium V689]
gi|424901319|ref|ZP_18324838.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium R497]
gi|424953629|ref|ZP_18368580.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium R494]
gi|424963303|ref|ZP_18377537.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium P1190]
gi|424970373|ref|ZP_18383892.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium P1139]
gi|424974410|ref|ZP_18387642.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium P1137]
gi|424979477|ref|ZP_18392326.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium P1123]
gi|424982654|ref|ZP_18395295.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium ERV99]
gi|424991594|ref|ZP_18403734.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium ERV26]
gi|425007563|ref|ZP_18418686.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium ERV1]
gi|425014430|ref|ZP_18425105.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E417]
gi|425019732|ref|ZP_18430073.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium C497]
gi|425022790|ref|ZP_18432945.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium C1904]
gi|425034138|ref|ZP_18439049.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium 514]
gi|425040464|ref|ZP_18444932.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium 513]
gi|425043017|ref|ZP_18447289.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium 511]
gi|425044850|ref|ZP_18448978.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium 510]
gi|425052567|ref|ZP_18456167.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium 506]
gi|425059881|ref|ZP_18463197.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium 503]
gi|430831715|ref|ZP_19449764.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E0333]
gi|430848438|ref|ZP_19466255.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1133]
gi|430850943|ref|ZP_19468699.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1185]
gi|430853384|ref|ZP_19471112.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1258]
gi|430857116|ref|ZP_19474787.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1392]
gi|431301203|ref|ZP_19507522.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1626]
gi|431538220|ref|ZP_19517570.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1731]
gi|431679745|ref|ZP_19524501.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1904]
gi|431749190|ref|ZP_19537934.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E2297]
gi|431754258|ref|ZP_19542922.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E2883]
gi|431769159|ref|ZP_19557585.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1321]
gi|431770242|ref|ZP_19558645.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1644]
gi|431773801|ref|ZP_19562117.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E2369]
gi|431779479|ref|ZP_19567674.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E4389]
gi|68195629|gb|EAN10069.1| GTP-binding protein, HSR1-related [Enterococcus faecium DO]
gi|257814467|gb|EEV43225.1| GTP-binding protein YqeH [Enterococcus faecium 1,230,933]
gi|257821137|gb|EEV48271.1| GTP-binding protein YqeH [Enterococcus faecium 1,231,501]
gi|257827737|gb|EEV54363.1| GTP-binding protein YqeH [Enterococcus faecium 1,231,410]
gi|257830005|gb|EEV56612.1| GTP-binding protein YqeH [Enterococcus faecium 1,231,408]
gi|260073465|gb|EEW61793.1| GTP-binding protein YqeH [Enterococcus faecium C68]
gi|260077019|gb|EEW64741.1| GTP-binding protein YqeH [Enterococcus faecium TC 6]
gi|289163029|gb|EFD10877.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium D344SRF]
gi|291594757|gb|EFF26139.1| nitric-oxide synthase [Enterococcus faecium E1679]
gi|291604733|gb|EFF34217.1| nitric-oxide synthase [Enterococcus faecium E1162]
gi|313589088|gb|EFR67933.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium TX0133a01]
gi|313593758|gb|EFR72603.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium TX0133B]
gi|313596596|gb|EFR75441.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium TX0133A]
gi|313599163|gb|EFR78008.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium TX0133C]
gi|313641470|gb|EFS06050.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium TX0133a04]
gi|313645182|gb|EFS09762.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium TX0082]
gi|364091097|gb|EHM33601.1| nitric-oxide synthase [Enterococcus faecium E4452]
gi|364091181|gb|EHM33679.1| nitric-oxide synthase [Enterococcus faecium E4453]
gi|378938325|gb|AFC63397.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium Aus0004]
gi|388533412|gb|AFK58604.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium DO]
gi|402916877|gb|EJX37709.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium V689]
gi|402930713|gb|EJX50343.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium R497]
gi|402938628|gb|EJX57616.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium R494]
gi|402949758|gb|EJX67797.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium P1190]
gi|402956415|gb|EJX73877.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium P1137]
gi|402957907|gb|EJX75265.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium P1123]
gi|402960308|gb|EJX77464.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium ERV99]
gi|402962021|gb|EJX79003.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium P1139]
gi|402976381|gb|EJX92277.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium ERV26]
gi|402994712|gb|EJY09225.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium ERV1]
gi|402998680|gb|EJY12924.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E417]
gi|403010909|gb|EJY24250.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium C497]
gi|403011880|gb|EJY25159.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium C1904]
gi|403012771|gb|EJY25951.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium 513]
gi|403021277|gb|EJY33745.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium 514]
gi|403021500|gb|EJY33956.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium 511]
gi|403028500|gb|EJY40320.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium 510]
gi|403033853|gb|EJY45337.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium 506]
gi|403043186|gb|EJY54110.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium 503]
gi|430481096|gb|ELA58261.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E0333]
gi|430534700|gb|ELA75135.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1185]
gi|430534881|gb|ELA75313.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1133]
gi|430540465|gb|ELA80667.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1258]
gi|430542841|gb|ELA82934.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1392]
gi|430580393|gb|ELB18860.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1626]
gi|430594762|gb|ELB32725.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1731]
gi|430598810|gb|ELB36538.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1904]
gi|430611952|gb|ELB49019.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E2297]
gi|430619865|gb|ELB56677.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E2883]
gi|430627934|gb|ELB64398.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1321]
gi|430635135|gb|ELB71233.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E2369]
gi|430635995|gb|ELB72074.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1644]
gi|430642334|gb|ELB78115.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E4389]
Length = 369
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 122/387 (31%), Positives = 182/387 (47%), Gaps = 46/387 (11%)
Query: 100 SCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGY 159
C GCGA +QT++ GY E K V C RC L H + I V
Sbjct: 6 QCIGCGAVIQTNKPGELGYTPQTALE---KGLASGEVYCQRCFRLRHYNEIQDVS----- 57
Query: 160 AGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVD 219
++ D+ L+ L ++ ALIV +VDI DFNGS + + G NP++LV KVD
Sbjct: 58 ------LTDDDFLRLLNELGQKDALIVNVVDIFDFNGSLIPGLHRFVGDNPVLLVGNKVD 111
Query: 220 LLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILG 279
+LPK + W+ E + + + V LTS+K + + +I++ + GRDVYI+G
Sbjct: 112 ILPKSLKKTKLTQWMKERAYEAGIRPVDVLLTSAKKSHEMTELLEKIEEYRDGRDVYIVG 171
Query: 280 SANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS IN ++K +Q PGTTL I+I G L DTP
Sbjct: 172 VTNVGKSTLINQIIKNTAGVQDVITTSQ--------FPGTTLDKIEI-PLDDGHFLIDTP 222
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + +DL +AP ++ + + + NE G T+F GGL R
Sbjct: 223 GIIHRHQMAHYLGKKDLRIIAPLKEIKPKVYQL-------NE-------GQTLFLGGLAR 268
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + Y + ++ +KADEFYQK +G L PP + E + L
Sbjct: 269 FDFISG-NRASFIAYVSNDVNIHRTKLEKADEFYQKHVGGLLQPP-RPDEVEAFPEL--- 323
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
++FE + + +D+ +GLGWI+V
Sbjct: 324 ----VRFEFSVKEKTDIVFAGLGWITV 346
>gi|417934231|ref|ZP_12577551.1| ribosome biogenesis GTPase YqeH [Streptococcus mitis bv. 2 str.
F0392]
gi|340770801|gb|EGR93316.1| ribosome biogenesis GTPase YqeH [Streptococcus mitis bv. 2 str.
F0392]
Length = 368
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 119/387 (30%), Positives = 191/387 (49%), Gaps = 48/387 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT++ G+ E K + V C RC L H + IT V
Sbjct: 6 CIGCGATIQTTDKTGLGFTPQSALE---KGLETGEVYCQRCFRLRHYNEITDVQ------ 56
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ + L + AL+V ++DI DFNGS + + N ++LV K D+
Sbjct: 57 -----LTDDDFLKLLHEVGDSDALVVNVIDIFDFNGSVIPGLPRFVSGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W++E ++ L + V LTS+++ I V +I+ +KGRDVY++G
Sbjct: 112 LPKSVKPGKISQWLMERAHEEGLRPVDVVLTSAQNKHAIKEVIDKIEHYRKGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G+++ S PGTTL I+I G +YDTP
Sbjct: 172 TNVGKSTLINAIIQEITGDQNVITT---------SRFPGTTLDKIEI-PLDDGSYIYDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + A++L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLTAKNLKYVSPKKEIKPKTYQLNPEQ--------------TLFLGGLGR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + F+ L+++ + A FY K LG LTPP K+K D
Sbjct: 268 FDFISGEKQGFTAFFD-NELKLHRTKLEGASAFYDKHLGTLLTPPNSKEKE------DFP 320
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
+L++ F T + +D+ ISGLGWI V
Sbjct: 321 KLVQHVF--TIKDKTDLVISGLGWIRV 345
>gi|425050125|ref|ZP_18453893.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium 509]
gi|403024624|gb|EJY36769.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium 509]
Length = 369
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 122/387 (31%), Positives = 182/387 (47%), Gaps = 46/387 (11%)
Query: 100 SCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGY 159
C GCGA +QT++ GY E K V C RC L H + I V
Sbjct: 6 QCIGCGAGIQTNKPGELGYTPQTALE---KGLASGEVYCQRCFRLRHYNEIQDVS----- 57
Query: 160 AGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVD 219
++ D+ L+ L ++ ALIV +VDI DFNGS + + G NP++LV KVD
Sbjct: 58 ------LTDDDFLRLLNELGQKDALIVNVVDIFDFNGSLIPGLHRFVGDNPVLLVGNKVD 111
Query: 220 LLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILG 279
+LPK + W+ E + + + V LTS+K + + +I++ + GRDVYI+G
Sbjct: 112 ILPKSLKKTKLTQWMKERAYEAGIRPVDVLLTSAKKSHEMTELLEKIEEYRDGRDVYIVG 171
Query: 280 SANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS IN ++K +Q PGTTL I+I G L DTP
Sbjct: 172 VTNVGKSTLINQIIKNTAGVQDVITTSQ--------FPGTTLDKIEI-PLDDGHFLIDTP 222
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + +DL +AP ++ + + + NE G T+F GGL R
Sbjct: 223 GIIHRHQMAHYLGKKDLRIIAPLKEIKPKVYQL-------NE-------GQTLFLGGLAR 268
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + Y + ++ +KADEFYQK +G L PP + E + L
Sbjct: 269 FDFISG-NRASFIAYVSNDVNIHRTKLEKADEFYQKHVGGLLQPP-RPDEVEAFPEL--- 323
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
++FE + + +D+ +GLGWI+V
Sbjct: 324 ----VRFEFSVKEKTDIVFAGLGWITV 346
>gi|418968094|ref|ZP_13519722.1| ribosome biogenesis GTPase YqeH [Streptococcus mitis SK616]
gi|383341384|gb|EID19644.1| ribosome biogenesis GTPase YqeH [Streptococcus mitis SK616]
Length = 368
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 119/387 (30%), Positives = 191/387 (49%), Gaps = 48/387 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT++ G+ E K + V C RC L H + IT V
Sbjct: 6 CIGCGATIQTTDKAGLGFTPQSALE---KGLETGEVYCQRCFRLRHYNEITDVQ------ 56
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ + L + AL+V ++DI DFNGS + + N ++LV K D+
Sbjct: 57 -----LTDDDFLKLLHEVGDSDALVVNVIDIFDFNGSVIPGLPRFVSGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W++E ++ L + V LTS+++ I V +I+ +KGRDVY++G
Sbjct: 112 LPKSVKPGKISQWLMERAHEEGLRPVDVVLTSAQNKHAIKEVIDKIEHYRKGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G+++ S PGTTL I+I G +YDTP
Sbjct: 172 TNVGKSTLINAIIQEITGDQNVITT---------SRFPGTTLDKIEI-PLDDGSYIYDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + A++L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLTAKNLKYVSPKKEIKPKTYQLNPEQ--------------TLFLGGLGR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + F+ L+++ + A FY K LG LTPP K+K D
Sbjct: 268 FDFIAGEKQGFTAFF-DNELKLHRTKLEGASAFYDKHLGTLLTPPNSKEKE------DFP 320
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
+L++ F E+ +D+ ISGLGWI V
Sbjct: 321 KLVQHVFNIKEK--TDLVISGLGWIRV 345
>gi|242373901|ref|ZP_04819475.1| GTP-binding protein [Staphylococcus epidermidis M23864:W1]
gi|242348455|gb|EES40057.1| GTP-binding protein [Staphylococcus epidermidis M23864:W1]
Length = 366
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 133/432 (30%), Positives = 209/432 (48%), Gaps = 70/432 (16%)
Query: 96 SAVASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFK-TVLCGRCRLLSHGHMITAVG 154
S C GCGAPLQ+ + +APGYV +H+ F+ V+C RC L + + + VG
Sbjct: 2 SETLKCIGCGAPLQSEDKNAPGYV--------PEHNMFREDVICQRCFRLKNYNEVQDVG 53
Query: 155 GNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILV 214
+ +++ L+ L +K ++V +VD+ DF GSF+ I+ + G IIL
Sbjct: 54 -----------MDSEDFLNLLTGLSDQKGIVVNVVDVFDFEGSFINAIKRIVGNKKIILA 102
Query: 215 VTKVDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRD 274
K+DLLPK + V +W+ ++ K L V L S+ GI + I + + D
Sbjct: 103 ANKLDLLPKQINKRRVKEWLKKSARKYGLEAEDVVLISADKGWGIEELLQSINQYRNNED 162
Query: 275 VYILGSANVGKSAFINALLK-KMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGG 333
VYI+G+ NVGKS IN L++ +GE+D S PGTTL I I
Sbjct: 163 VYIVGTTNVGKSTLINKLIEISVGEKDVVTT---------SRFPGTTLDMIDI-PLDETT 212
Query: 334 KLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIF 393
+YDTPG+ H+ V ++L + P+ ++ + + + NE G T+F
Sbjct: 213 FMYDTPGIIQEHQMTHYVSEKELKTIMPKKEIKQRVYQL-------NE-------GQTLF 258
Query: 394 WGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGW 453
+GGL RID + + F+ L ++ T+KA+E ++ +LG LTPP AE +
Sbjct: 259 FGGLARIDYVSGGKRPLICFFS-NDLNIHRTKTEKANELWKSQLGSVLTPP---HNAENF 314
Query: 454 KGLDRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHV 513
D + ++ E T + DV ISGLG+I+++ + I V V
Sbjct: 315 ---DLNNVKAVRLE-TGKAKRDVMISGLGFITIDEGAKVI-----------------VRV 353
Query: 514 PKPVEVFVRNPM 525
PK V+V +RN +
Sbjct: 354 PKNVDVILRNSI 365
>gi|417694623|ref|ZP_12343810.1| GTPase family protein [Streptococcus pneumoniae GA47901]
gi|332201172|gb|EGJ15243.1| GTPase family protein [Streptococcus pneumoniae GA47901]
Length = 368
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 119/387 (30%), Positives = 191/387 (49%), Gaps = 48/387 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT++ G+ E K + V C RC L H + IT V
Sbjct: 6 CIGCGATIQTTDKAGLGFTPQSALE---KDLETGEVYCQRCFRLRHYNEITDVQ------ 56
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ + L + AL+V ++DI DFNGS + + N ++LV K D+
Sbjct: 57 -----LTNDDFLKLLHEVGDSNALVVNVIDIFDFNGSVIPGLPRFVSGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W+++ ++ L + V LTS+++ I V +I+ +KGRDVY++G
Sbjct: 112 LPKSVKSGKISQWLMKRAHEEGLRPVDVVLTSAQNKHAIKEVIDKIEHYRKGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G+++ S PGTTL I+I G +YDTP
Sbjct: 172 TNVGKSTLINAIIQEITGDQNVITT---------SRFPGTTLDKIEI-PLDDGSYIYDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + A++L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLTAKNLKYVSPKKEIKPKTYQLNPEQ--------------TLFLGGLGR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + F+ L+++ + A FY K LG LTPP K+K D
Sbjct: 268 FDFIAGEKQGFTAFF-DNELKLHRSKLEGASAFYDKHLGTLLTPPNSKEKE------DFP 320
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
RL++ F T + +D+ ISGLGWI V
Sbjct: 321 RLVQHVF--TIKDKTDLVISGLGWIRV 345
>gi|450131395|ref|ZP_21869464.1| GTP-binding protein YqeH [Streptococcus mutans NLML8]
gi|449153855|gb|EMB57487.1| GTP-binding protein YqeH [Streptococcus mutans NLML8]
Length = 368
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 114/387 (29%), Positives = 194/387 (50%), Gaps = 48/387 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT+ + GY E K + + C RC L H + IT V
Sbjct: 6 CIGCGAQIQTTAKEQAGYTPKSALE---KGLESGKIYCQRCFRLRHYNEITDV------- 55
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
+S D+ + L + +AL+V ++DI DFNGS + ++ ++ ++LV K D+
Sbjct: 56 ----HISDDDFLKLLHEVGDSRALVVNVIDIFDFNGSVIPGLQRFISSSDLLLVGNKADI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W++E ++ L L + LTS+++ I + ++I++ ++GRDVY++G
Sbjct: 112 LPKSVKSGKITQWLMERAHEEGLRPLDLILTSAQNKWAIKELIAKIEELRQGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G+++ S PGTTLG I+I G ++DTP
Sbjct: 172 TNVGKSTLINAIIQEITGDKNIITT---------SRFPGTTLGKIEI-PLNDGSYIFDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + + L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLSDKALKYISPKKEIKPKTYQLNPEQ--------------TLFLGGLAR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + T Y +L+++ +AD FY K +G LTPP K+ A K
Sbjct: 268 FDYV-TGDKQGFTAYFDNNLKLHRTKLARADAFYDKHIGSLLTPPDKKEMAAFPK----- 321
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
++ E T + +D+ SGLGWI +
Sbjct: 322 ---LVRHEFTIKEKTDLVFSGLGWIRI 345
>gi|315612639|ref|ZP_07887551.1| ribosome biogenesis GTPase YqeH [Streptococcus sanguinis ATCC
49296]
gi|315315226|gb|EFU63266.1| ribosome biogenesis GTPase YqeH [Streptococcus sanguinis ATCC
49296]
Length = 368
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 119/387 (30%), Positives = 191/387 (49%), Gaps = 48/387 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT++ G+ E K + V C RC L H + IT V
Sbjct: 6 CIGCGATIQTTDKAGLGFTPQSALE---KGLETGEVYCQRCFRLRHYNEITDVQ------ 56
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ + L + AL+V ++DI DFNGS + + N ++LV K D+
Sbjct: 57 -----LTDDDFLKLLHEVGDSDALVVNVIDIFDFNGSVIPGLPRFVSGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W++E ++ L + V LTS+++ I V +I+ +KGRDVY++G
Sbjct: 112 LPKSVKPGKISQWLMERAHEEGLRPVDVVLTSAQNKHAIKEVIDKIEHYRKGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G+++ S PGTTL I+I G +YDTP
Sbjct: 172 TNVGKSTLINAIIQEITGDQNVITT---------SRFPGTTLDKIEI-PLDDGSYIYDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + A++L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLTAKNLKYVSPKKEIKPKTYQLNPEQ--------------TLFLGGLGR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + F+ L+++ + A FY K LG LTPP K+K D
Sbjct: 268 FDFIAGEKQGFTAFFD-NELKLHRTKLESASAFYDKHLGTLLTPPNSKEKE------DFP 320
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
+L++ F T + +D+ ISGLGWI V
Sbjct: 321 KLVQHVF--TIKDKTDLVISGLGWIRV 345
>gi|293571008|ref|ZP_06682051.1| nitric-oxide synthase [Enterococcus faecium E980]
gi|424833434|ref|ZP_18258158.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium R501]
gi|424984138|ref|ZP_18396689.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium ERV69]
gi|424987609|ref|ZP_18399980.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium ERV38]
gi|430829410|ref|ZP_19447503.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E0269]
gi|430833624|ref|ZP_19451635.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E0679]
gi|430836932|ref|ZP_19454908.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E0680]
gi|430839014|ref|ZP_19456956.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E0688]
gi|430840824|ref|ZP_19458746.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1007]
gi|430859776|ref|ZP_19477385.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1552]
gi|430869739|ref|ZP_19482939.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1575]
gi|431067593|ref|ZP_19494012.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1604]
gi|431099487|ref|ZP_19496653.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1613]
gi|431188241|ref|ZP_19500153.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1620]
gi|431738177|ref|ZP_19527122.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1972]
gi|431741776|ref|ZP_19530677.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E2039]
gi|431745631|ref|ZP_19534475.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E2134]
gi|291608934|gb|EFF38213.1| nitric-oxide synthase [Enterococcus faecium E980]
gi|402922555|gb|EJX42921.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium R501]
gi|402969777|gb|EJX86163.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium ERV69]
gi|402974021|gb|EJX90095.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium ERV38]
gi|430480849|gb|ELA58020.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E0269]
gi|430486029|gb|ELA62897.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E0679]
gi|430487713|gb|ELA64421.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E0680]
gi|430491011|gb|ELA67493.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E0688]
gi|430494780|gb|ELA71009.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1007]
gi|430543313|gb|ELA83388.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1552]
gi|430559428|gb|ELA98778.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1575]
gi|430568018|gb|ELB07076.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1604]
gi|430570988|gb|ELB09927.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1613]
gi|430572523|gb|ELB11375.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1620]
gi|430597615|gb|ELB35398.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1972]
gi|430601118|gb|ELB38734.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E2039]
gi|430610387|gb|ELB47539.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E2134]
Length = 369
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 122/387 (31%), Positives = 182/387 (47%), Gaps = 46/387 (11%)
Query: 100 SCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGY 159
C GCGA +QT++ GY E K V C RC L H + I V
Sbjct: 6 QCIGCGAVIQTNKPGELGYTPQTALE---KGLASGEVYCQRCFRLRHYNEIQDVS----- 57
Query: 160 AGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVD 219
++ D+ L+ L ++ ALIV +VDI DFNGS + + G NP++LV KVD
Sbjct: 58 ------LTDDDFLRLLNELGQKDALIVNVVDIFDFNGSLIPGLHRFVGDNPVLLVGNKVD 111
Query: 220 LLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILG 279
+LPK + W+ E + + + V LTS+K + + +I++ + GRDVYI+G
Sbjct: 112 ILPKSLKKTKLTQWMKERAYEAGIRPVDVLLTSAKKSHEMTELLEKIEEYRDGRDVYIVG 171
Query: 280 SANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS IN ++K +Q PGTTL I+I G L DTP
Sbjct: 172 VTNVGKSTLINQIIKNTAGVQDVITTSQ--------FPGTTLDKIEI-PLDDGHFLIDTP 222
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + +DL +AP ++ + + + NE G T+F GGL R
Sbjct: 223 GIIHRHQMAHYLGKKDLRIIAPLKEIKPKVYQL-------NE-------GQTLFLGGLAR 268
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + Y + ++ +KADEFYQK +G L PP + E + L
Sbjct: 269 FDFISG-NRASFIAYVSNDVNIHRTKLEKADEFYQKHVGGLLQPP-RPNEVEEFPEL--- 323
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
++FE + + +D+ +GLGWI+V
Sbjct: 324 ----VRFEFSVKEKTDIVFAGLGWITV 346
>gi|419781006|ref|ZP_14306838.1| ribosome biogenesis GTPase YqeH [Streptococcus oralis SK100]
gi|383184398|gb|EIC76912.1| ribosome biogenesis GTPase YqeH [Streptococcus oralis SK100]
Length = 368
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 119/387 (30%), Positives = 191/387 (49%), Gaps = 48/387 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT++ G+ E K + V C RC L H + IT V
Sbjct: 6 CIGCGATIQTTDKAGLGFTPQSALE---KGLETGEVYCQRCFRLRHYNEITDVQ------ 56
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ + L + AL+V ++DI DFNGS + + N ++LV K D+
Sbjct: 57 -----LTDDDFLKLLHEVGDSDALVVNVIDIFDFNGSVIPGLPRFVSGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W++E ++ L + V LTS+++ I V +I+ +KGRDVY++G
Sbjct: 112 LPKSVKPGKISQWLMERAHEEGLRPVDVVLTSAQNKHAIREVIDKIEHYRKGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G+++ S PGTTL I+I G +YDTP
Sbjct: 172 TNVGKSTLINAIIQEITGDQNVITT---------SRFPGTTLDKIEI-PLDDGSYIYDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + A++L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLTAKNLKYVSPKKEIKPKTYQLNPEQ--------------TLFLGGLGR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + F+ L+++ + A FY K LG LTPP K+K D
Sbjct: 268 FDFISGEKQGFTAFF-DNELKLHRTKLEGASAFYDKHLGTLLTPPNNKEKE------DFP 320
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
+L++ F T + +D+ ISGLGWI V
Sbjct: 321 KLVQHVF--TIKDKTDLVISGLGWIRV 345
>gi|419767751|ref|ZP_14293898.1| ribosome biogenesis GTPase YqeH [Streptococcus mitis SK579]
gi|383352793|gb|EID30426.1| ribosome biogenesis GTPase YqeH [Streptococcus mitis SK579]
Length = 368
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 118/387 (30%), Positives = 191/387 (49%), Gaps = 48/387 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT++ G+ E K + V C RC L H + IT V
Sbjct: 6 CIGCGATIQTTDKSGLGFTPQSALE---KGLETGEVYCQRCFRLRHYNEITDVQ------ 56
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ + L + AL+V ++DI DFNGS + + N ++LV K D+
Sbjct: 57 -----LTDDDFLKLLHEVGDSDALVVNVIDIFDFNGSVIPGLPRFVSGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W++E ++ L + V LTS+++ I V +I+ +KGRDVY++G
Sbjct: 112 LPKSVKPGKISQWLMERAHEEGLRPVDVVLTSAQNKHAIKEVIDKIEHYRKGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G+++ S PGTTL I+I G +YDTP
Sbjct: 172 TNVGKSTLINAIIQEITGDQNIITT---------SRFPGTTLDKIEI-PLDDGSYIYDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + A++L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLTAKNLKYVSPKKEIKPKTYQLNPEQ--------------TLFLGGLGR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + F+ L+++ + A FY K LG LTPP K++ D
Sbjct: 268 FDFISGEKQGFTAFF-DNELKLHRTKLEGASAFYDKHLGTLLTPPNSKEQE------DFP 320
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
+L++ F E+ +D+ ISGLGWI V
Sbjct: 321 KLIQHVFNIKEK--TDLVISGLGWIRV 345
>gi|295425298|ref|ZP_06818001.1| ribosome biogenesis GTPase YqeH [Lactobacillus amylolyticus DSM
11664]
gi|295065074|gb|EFG55979.1| ribosome biogenesis GTPase YqeH [Lactobacillus amylolyticus DSM
11664]
Length = 369
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 121/386 (31%), Positives = 182/386 (47%), Gaps = 46/386 (11%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA LQ+ + GY+ P K + + V C RC L H + I V N
Sbjct: 7 CIGCGAVLQSDDPKKAGYL-PAAALKKAEAGETDNVYCQRCFRLRHYNEIMPVDLNN--- 62
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
D+ L+ L +KAL+V +VD+ DF+ S LA ++ G N ILV K DL
Sbjct: 63 --------DDFLALLNSLATKKALVVNVVDLFDFSNSLLASLKRFVGDNEFILVGNKFDL 114
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
P + + + DW+ + + L + L S+ + + + + + RD+Y +G
Sbjct: 115 FPLNSRQSRIKDWMRQEANRMGLYPSKIFLISAARQKNLDELIEYLDQASQDRDIYFVGM 174
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS INA++ KMG+ S PGTTL I+I G L DTPG
Sbjct: 175 TNVGKSTLINAIIDKMGDIKDVIT--------TSRFPGTTLDRIEI-PLENGHHLIDTPG 225
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ ++ A ++A DL ++P+ ++ +F + L G TIF GGL RI
Sbjct: 226 IMSTNQLATRLNAADLEVVSPKKPIKPATFQL--------------LPGNTIFLGGLGRI 271
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D LK T T Y + ++++ T AD+FYQK +G LTPP G+ KG +E
Sbjct: 272 DYLKG-QSTSFTVYAARGVKLHRTKTANADDFYQKHVGELLTPPTGENYLPALKG--QEY 328
Query: 461 LLEIKFEDTERPASDVAISGLGWISV 486
+ K SD+ G+G+++V
Sbjct: 329 HTDYK--------SDLLFGGVGFVTV 346
>gi|289168472|ref|YP_003446741.1| hypothetical protein smi_1639 [Streptococcus mitis B6]
gi|288908039|emb|CBJ22879.1| conserved hypothetical protein [Streptococcus mitis B6]
Length = 368
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 126/426 (29%), Positives = 202/426 (47%), Gaps = 65/426 (15%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT++ G+ E K + V C RC L H + IT V
Sbjct: 6 CIGCGATIQTTDKAGLGFTPQSALE---KGLETGEVYCQRCFRLRHYNEITDVQ------ 56
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ + L + AL+V ++DI DFNGS + + N ++LV K D+
Sbjct: 57 -----LTDDDFLKLLHEVGDSDALVVNVIDIFDFNGSVIPGLPRFVSGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W++E ++ L + V LTS+++ I V +I+ +KGRDVY++G
Sbjct: 112 LPKSVKPGKISQWLMERAHEEGLRPVDVVLTSAQNKHAIKEVIDKIEHYRKGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G+++ S PGTTL I+I G +YDTP
Sbjct: 172 TNVGKSTLINAIIQEITGDQNVITT---------SRFPGTTLDKIEI-PLDDGSYIYDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + A++L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLTAKNLKYVSPKKEIKPKTYQLNPEQ--------------TLFLGGLGR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + F+ L+++ + A FY K LG LTPP K+K D
Sbjct: 268 FDFISGEKQGFTAFFD-NELKLHRTKLEGASAFYDKHLGTLLTPPNSKEKE------DFP 320
Query: 460 RLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVEV 519
+L++ F T + +D+ ISGLGWI V +G +AV P+ V V
Sbjct: 321 KLVQHVF--TIKDKTDLVISGLGWIRV-----------------TGTAKVAVWAPEDVAV 361
Query: 520 FVRNPM 525
R +
Sbjct: 362 VTRKAI 367
>gi|403668289|ref|ZP_10933564.1| GTPase YqeH [Kurthia sp. JC8E]
Length = 367
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 121/422 (28%), Positives = 195/422 (46%), Gaps = 65/422 (15%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG +QT + APG+ E ++ ++C RC L + + + V
Sbjct: 7 CIGCGTQIQTEDPKAPGFAPASALEKEE-------IICKRCFRLKNYNELQPVS------ 53
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ L+ L +K LIVK+VDI DF GS+L + G NP++L+ KVDL
Sbjct: 54 -----LTDDDFLRILNGLGTQKGLIVKIVDIFDFTGSWLPGLHRFVGNNPVLLIANKVDL 108
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + V +W+ + + L + V L S+ GI +I++ ++G DVY++G
Sbjct: 109 LPKSINPKKVINWIRQEAKQLGLKPVDVLLVSAHKGNGIEEAMEKIEEYRRGEDVYVVGC 168
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS FIN ++K+ A Q S PGTTL I+I +YDTPG
Sbjct: 169 TNVGKSTFINRIIKQ--------ATGQGDVITTSYFPGTTLDMIEI-PLDDEKAIYDTPG 219
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ HH+ A + A++L + P+ ++ ++F + +E T+F G L R
Sbjct: 220 IINHHQMAHHIDAKELKYIMPKKEIKPKTFQLNAEQ--------------TLFIGALARF 265
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D ++ + T + L ++ + ADE Y+ G L PP K+ + L R
Sbjct: 266 DFIQG-HRSNFTVHIANDLNIHRTKLENADELYETHKGELLAPPT-KEFIDQLPPLVRHE 323
Query: 461 LLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVEVF 520
+ D+ SGLGWI+V+ + + +A + P+ VEV
Sbjct: 324 F------SIKEDKIDIVYSGLGWITVQ----------------NANVVVAAYAPEGVEVT 361
Query: 521 VR 522
+R
Sbjct: 362 IR 363
>gi|148989411|ref|ZP_01820779.1| GTP-binding protein [Streptococcus pneumoniae SP6-BS73]
gi|147925161|gb|EDK76241.1| GTP-binding protein [Streptococcus pneumoniae SP6-BS73]
Length = 368
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 119/387 (30%), Positives = 191/387 (49%), Gaps = 48/387 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT++ G+ E K + V C RC L H + IT V
Sbjct: 6 CIGCGATIQTTDKAGLGFTPQSALE---KGLETGEVYCQRCFRLRHYNEITDVQ------ 56
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ + L + AL+V ++DI DFNGS + + N ++LV K D+
Sbjct: 57 -----LTNDDFLKLLHEVGDSNALVVNVIDIFDFNGSVIPGLPRFVSGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W+++ ++ L + V LTS+++ I V +I+ +KGRDVY++G
Sbjct: 112 LPKSVKSGKISQWLMKRAREEGLRPVDVVLTSAQNKHAIKEVIDKIEHYRKGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G+++ S PGTTL I+I G +YDTP
Sbjct: 172 TNVGKSTLINAIIQEITGDQNVITT---------SRFPGTTLDKIEI-PLDDGSYIYDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + A++L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLTAKNLKYVSPKKEIKPKTYQLNPEQ--------------TLFLGGLGR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + F+ L+++ + A FY K LG LTPP K+K D
Sbjct: 268 FDFIAGEKQGFTAFF-DNELKLHRSKLEGASAFYDKHLGTLLTPPNSKEKE------DFP 320
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
RL++ F T + +D+ ISGLGWI V
Sbjct: 321 RLVQHVF--TIKDKTDLVISGLGWIRV 345
>gi|306825774|ref|ZP_07459113.1| ribosome biogenesis GTPase YqeH [Streptococcus sp. oral taxon 071
str. 73H25AP]
gi|414157993|ref|ZP_11414287.1| ribosome biogenesis GTPase YqeH [Streptococcus sp. F0441]
gi|304432135|gb|EFM35112.1| ribosome biogenesis GTPase YqeH [Streptococcus sp. oral taxon 071
str. 73H25AP]
gi|410870538|gb|EKS18495.1| ribosome biogenesis GTPase YqeH [Streptococcus sp. F0441]
Length = 368
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 119/387 (30%), Positives = 191/387 (49%), Gaps = 48/387 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT++ G+ E K + V C RC L H + IT V
Sbjct: 6 CIGCGATIQTTDKAGLGFTPQSALE---KGLETGEVYCQRCFRLRHYNEITDVQ------ 56
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ + L + AL+V ++DI DFNGS + + N ++LV K D+
Sbjct: 57 -----LTDDDFLKLLHEVGDSDALVVNVIDIFDFNGSVIPGLPRFVSGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W++E ++ L + V LTS+++ I V +I+ +KGRDVY++G
Sbjct: 112 LPKSVKPGKISQWLMERAHEEGLRPVDVVLTSAQNKHAIKEVIDKIEHYRKGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G+++ S PGTTL I+I G +YDTP
Sbjct: 172 TNVGKSTLINAIIQEITGDQNVITT---------SRFPGTTLDKIEI-PLDDGSYIYDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + A++L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLTAKNLKYVSPKKEIKPKTYQLNPEQ--------------TLFLGGLGR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + F+ L+++ + A FY K LG LTPP K+K D
Sbjct: 268 FDFISGEKQGFTAFF-DNELKLHRTKLEGASAFYDKHLGTLLTPPNSKEKE------DFP 320
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
+L++ F T + +D+ ISGLGWI V
Sbjct: 321 KLVQHVF--TIKDKTDLVISGLGWIRV 345
>gi|30264407|ref|NP_846784.1| GTP-binding protein YqeH [Bacillus anthracis str. Ames]
gi|42783462|ref|NP_980709.1| GTP-binding protein YqeH [Bacillus cereus ATCC 10987]
gi|47569331|ref|ZP_00240015.1| GTPase of unknown function [Bacillus cereus G9241]
gi|47778309|ref|YP_021207.2| GTP-binding protein YqeH [Bacillus anthracis str. 'Ames Ancestor']
gi|49187229|ref|YP_030481.1| GTP-binding protein YqeH [Bacillus anthracis str. Sterne]
gi|49481394|ref|YP_038389.1| GTP-binding protein YqeH [Bacillus thuringiensis serovar konkukian
str. 97-27]
gi|52141172|ref|YP_085660.1| GTP-binding protein YqeH [Bacillus cereus E33L]
gi|65321707|ref|ZP_00394666.1| COG1161: Predicted GTPases [Bacillus anthracis str. A2012]
gi|118479501|ref|YP_896652.1| GTP-binding protein YqeH [Bacillus thuringiensis str. Al Hakam]
gi|165873260|ref|ZP_02217870.1| GTPase family protein [Bacillus anthracis str. A0488]
gi|167634670|ref|ZP_02392990.1| GTPase family protein [Bacillus anthracis str. A0442]
gi|167638624|ref|ZP_02396900.1| GTPase family protein [Bacillus anthracis str. A0193]
gi|170687451|ref|ZP_02878668.1| GTPase family protein [Bacillus anthracis str. A0465]
gi|170707440|ref|ZP_02897894.1| GTPase family protein [Bacillus anthracis str. A0389]
gi|177653312|ref|ZP_02935564.1| GTPase family protein [Bacillus anthracis str. A0174]
gi|190567041|ref|ZP_03019957.1| GTPase family protein [Bacillus anthracis str. Tsiankovskii-I]
gi|196034517|ref|ZP_03101926.1| GTPase family protein [Bacillus cereus W]
gi|196039178|ref|ZP_03106484.1| GTPase family protein [Bacillus cereus NVH0597-99]
gi|196044801|ref|ZP_03112035.1| GTPase family protein [Bacillus cereus 03BB108]
gi|206976038|ref|ZP_03236948.1| GTPase family protein [Bacillus cereus H3081.97]
gi|217961825|ref|YP_002340395.1| GTP-binding protein YqeH [Bacillus cereus AH187]
gi|218905472|ref|YP_002453306.1| GTP-binding protein YqeH [Bacillus cereus AH820]
gi|225866316|ref|YP_002751694.1| GTPase family protein [Bacillus cereus 03BB102]
gi|227817112|ref|YP_002817121.1| GTP-binding protein YqeH [Bacillus anthracis str. CDC 684]
gi|228916967|ref|ZP_04080528.1| hypothetical protein bthur0012_41800 [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
gi|228929380|ref|ZP_04092403.1| hypothetical protein bthur0010_40660 [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
gi|228935656|ref|ZP_04098470.1| hypothetical protein bthur0009_41020 [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
gi|228948049|ref|ZP_04110334.1| hypothetical protein bthur0007_41760 [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|228987588|ref|ZP_04147704.1| hypothetical protein bthur0001_42580 [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
gi|229093405|ref|ZP_04224510.1| hypothetical protein bcere0021_41310 [Bacillus cereus Rock3-42]
gi|229123874|ref|ZP_04253067.1| hypothetical protein bcere0016_41600 [Bacillus cereus 95/8201]
gi|229141073|ref|ZP_04269615.1| hypothetical protein bcere0013_41670 [Bacillus cereus BDRD-ST26]
gi|229157950|ref|ZP_04286022.1| hypothetical protein bcere0010_41300 [Bacillus cereus ATCC 4342]
gi|229186575|ref|ZP_04313736.1| hypothetical protein bcere0004_41180 [Bacillus cereus BGSC 6E1]
gi|229198463|ref|ZP_04325167.1| hypothetical protein bcere0001_39910 [Bacillus cereus m1293]
gi|229601475|ref|YP_002868625.1| GTP-binding protein YqeH [Bacillus anthracis str. A0248]
gi|254684092|ref|ZP_05147952.1| GTP-binding protein YqeH [Bacillus anthracis str. CNEVA-9066]
gi|254721926|ref|ZP_05183715.1| GTP-binding protein YqeH [Bacillus anthracis str. A1055]
gi|254741477|ref|ZP_05199164.1| GTP-binding protein YqeH [Bacillus anthracis str. Kruger B]
gi|254750916|ref|ZP_05202955.1| GTP-binding protein YqeH [Bacillus anthracis str. Vollum]
gi|254757756|ref|ZP_05209783.1| GTP-binding protein YqeH [Bacillus anthracis str. Australia 94]
gi|300118672|ref|ZP_07056400.1| GTP-binding protein YqeH [Bacillus cereus SJ1]
gi|301055827|ref|YP_003794038.1| GTPase [Bacillus cereus biovar anthracis str. CI]
gi|375286342|ref|YP_005106781.1| GTPase family protein [Bacillus cereus NC7401]
gi|376268233|ref|YP_005120945.1| GTP-binding protein YqeH like protein [Bacillus cereus F837/76]
gi|384182155|ref|YP_005567917.1| GTPase YqeH [Bacillus thuringiensis serovar finitimus YBT-020]
gi|386738225|ref|YP_006211406.1| GTP-binding protein [Bacillus anthracis str. H9401]
gi|402555530|ref|YP_006596801.1| GTPase YqeH [Bacillus cereus FRI-35]
gi|421506589|ref|ZP_15953512.1| GTPase YqeH [Bacillus anthracis str. UR-1]
gi|421638410|ref|ZP_16079006.1| GTPase YqeH [Bacillus anthracis str. BF1]
gi|423354828|ref|ZP_17332453.1| ribosome biogenesis GTPase YqeH [Bacillus cereus IS075]
gi|423373786|ref|ZP_17351125.1| ribosome biogenesis GTPase YqeH [Bacillus cereus AND1407]
gi|423549923|ref|ZP_17526250.1| ribosome biogenesis GTPase YqeH [Bacillus cereus ISP3191]
gi|423570575|ref|ZP_17546820.1| ribosome biogenesis GTPase YqeH [Bacillus cereus MSX-A12]
gi|423573985|ref|ZP_17550104.1| ribosome biogenesis GTPase YqeH [Bacillus cereus MSX-D12]
gi|423604015|ref|ZP_17579908.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VD102]
gi|30259065|gb|AAP28270.1| ribosome biogenesis protein GTPase YqeH [Bacillus anthracis str.
Ames]
gi|42739391|gb|AAS43317.1| GTPase family protein [Bacillus cereus ATCC 10987]
gi|47552014|gb|AAT33682.2| GTPase family protein [Bacillus anthracis str. 'Ames Ancestor']
gi|47554002|gb|EAL12369.1| GTPase of unknown function [Bacillus cereus G9241]
gi|49181156|gb|AAT56532.1| GTPase family protein [Bacillus anthracis str. Sterne]
gi|49332950|gb|AAT63596.1| GTP-binding protein [Bacillus thuringiensis serovar konkukian str.
97-27]
gi|51974641|gb|AAU16191.1| GTP-binding protein [Bacillus cereus E33L]
gi|118418726|gb|ABK87145.1| GTP-binding protein [Bacillus thuringiensis str. Al Hakam]
gi|164711019|gb|EDR16586.1| GTPase family protein [Bacillus anthracis str. A0488]
gi|167513472|gb|EDR88842.1| GTPase family protein [Bacillus anthracis str. A0193]
gi|167530122|gb|EDR92857.1| GTPase family protein [Bacillus anthracis str. A0442]
gi|170127684|gb|EDS96557.1| GTPase family protein [Bacillus anthracis str. A0389]
gi|170668646|gb|EDT19392.1| GTPase family protein [Bacillus anthracis str. A0465]
gi|172081594|gb|EDT66666.1| GTPase family protein [Bacillus anthracis str. A0174]
gi|190562032|gb|EDV16001.1| GTPase family protein [Bacillus anthracis str. Tsiankovskii-I]
gi|195993059|gb|EDX57018.1| GTPase family protein [Bacillus cereus W]
gi|196024289|gb|EDX62962.1| GTPase family protein [Bacillus cereus 03BB108]
gi|196029805|gb|EDX68406.1| GTPase family protein [Bacillus cereus NVH0597-99]
gi|206745790|gb|EDZ57187.1| GTPase family protein [Bacillus cereus H3081.97]
gi|217066660|gb|ACJ80910.1| GTPase family protein [Bacillus cereus AH187]
gi|218536686|gb|ACK89084.1| GTPase family protein [Bacillus cereus AH820]
gi|225786457|gb|ACO26674.1| GTPase family protein [Bacillus cereus 03BB102]
gi|227004029|gb|ACP13772.1| GTPase family protein [Bacillus anthracis str. CDC 684]
gi|228584966|gb|EEK43080.1| hypothetical protein bcere0001_39910 [Bacillus cereus m1293]
gi|228596834|gb|EEK54493.1| hypothetical protein bcere0004_41180 [Bacillus cereus BGSC 6E1]
gi|228625510|gb|EEK82265.1| hypothetical protein bcere0010_41300 [Bacillus cereus ATCC 4342]
gi|228642351|gb|EEK98640.1| hypothetical protein bcere0013_41670 [Bacillus cereus BDRD-ST26]
gi|228659588|gb|EEL15235.1| hypothetical protein bcere0016_41600 [Bacillus cereus 95/8201]
gi|228689999|gb|EEL43802.1| hypothetical protein bcere0021_41310 [Bacillus cereus Rock3-42]
gi|228772129|gb|EEM20579.1| hypothetical protein bthur0001_42580 [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
gi|228811635|gb|EEM57971.1| hypothetical protein bthur0007_41760 [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|228824016|gb|EEM69834.1| hypothetical protein bthur0009_41020 [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
gi|228830286|gb|EEM75900.1| hypothetical protein bthur0010_40660 [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
gi|228842688|gb|EEM87775.1| hypothetical protein bthur0012_41800 [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
gi|229265883|gb|ACQ47520.1| GTPase family protein [Bacillus anthracis str. A0248]
gi|298723921|gb|EFI64635.1| GTP-binding protein YqeH [Bacillus cereus SJ1]
gi|300377996|gb|ADK06900.1| GTPase family protein [Bacillus cereus biovar anthracis str. CI]
gi|324328239|gb|ADY23499.1| GTPase YqeH [Bacillus thuringiensis serovar finitimus YBT-020]
gi|358354869|dbj|BAL20041.1| GTPase family protein [Bacillus cereus NC7401]
gi|364514033|gb|AEW57432.1| GTP-binding protein YqeH like protein [Bacillus cereus F837/76]
gi|384388077|gb|AFH85738.1| GTP-binding protein [Bacillus anthracis str. H9401]
gi|401085832|gb|EJP94066.1| ribosome biogenesis GTPase YqeH [Bacillus cereus IS075]
gi|401095187|gb|EJQ03247.1| ribosome biogenesis GTPase YqeH [Bacillus cereus AND1407]
gi|401189539|gb|EJQ96589.1| ribosome biogenesis GTPase YqeH [Bacillus cereus ISP3191]
gi|401203771|gb|EJR10606.1| ribosome biogenesis GTPase YqeH [Bacillus cereus MSX-A12]
gi|401212554|gb|EJR19297.1| ribosome biogenesis GTPase YqeH [Bacillus cereus MSX-D12]
gi|401245701|gb|EJR52054.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VD102]
gi|401796740|gb|AFQ10599.1| GTPase YqeH [Bacillus cereus FRI-35]
gi|401823582|gb|EJT22729.1| GTPase YqeH [Bacillus anthracis str. UR-1]
gi|403394836|gb|EJY92076.1| GTPase YqeH [Bacillus anthracis str. BF1]
Length = 368
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 125/428 (29%), Positives = 191/428 (44%), Gaps = 70/428 (16%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG +QT + + GY + E ++ V+C RC L H + I V
Sbjct: 7 CIGCGVEIQTEDKNEVGYAPASSLEKEQ-------VICQRCFRLKHYNEIQDVS------ 53
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ L+ + + AL+VK+VDI DFNGS+L + G N ++LV K DL
Sbjct: 54 -----LTDDDFLRILNGIGKSDALVVKIVDIFDFNGSWLPGLHRFVGNNKVLLVGNKADL 108
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
+PK + V W+ + + L V L S+ GI +A I+ + G+DVY++G
Sbjct: 109 IPKSVKHDKVKHWMRYSAKQLGLKPEDVFLISAAKGQGIAELADAIEYYRGGKDVYVVGC 168
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS FIN ++K+ + + PGTTL I I LYDTPG
Sbjct: 169 TNVGKSTFINRMIKEFSDETENVITTSHF-------PGTTLDLIDI-PLDEESSLYDTPG 220
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ HH+ A V + L + P ++ F + E T+F+ GL R
Sbjct: 221 IINHHQMAHYVGKQSLKLITPTKEIKPMVFQLNEEQ--------------TLFFSGLARF 266
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D + T + L ++ +KADE Y+ G L+PP ++ E
Sbjct: 267 DYVSG-GRRAFTCHFSNRLTIHRTKLEKADELYKNHAGDLLSPPTPEE---------LEN 316
Query: 461 LLE-IKFE-DTERPASDVAISGLGWISV-EPVRRSIRNSDINLESTSGELHLAVHVPKPV 517
+ E +K+E + P +DV SGLGW++V EP + + HVPK V
Sbjct: 317 MPELVKYEFNIREPKTDVVFSGLGWVTVNEPGAK-----------------IVAHVPKGV 359
Query: 518 EVFVRNPM 525
V +R +
Sbjct: 360 SVSLRKSL 367
>gi|406577139|ref|ZP_11052757.1| GTPase YqeH [Streptococcus sp. GMD6S]
gi|404460314|gb|EKA06584.1| GTPase YqeH [Streptococcus sp. GMD6S]
Length = 368
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 119/387 (30%), Positives = 191/387 (49%), Gaps = 48/387 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT++ G+ E K + V C RC L H + IT V
Sbjct: 6 CIGCGATIQTTDKAGLGFTPQSALE---KGLETGEVYCQRCFRLRHYNEITDVQ------ 56
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ + L + AL+V ++DI DFNGS + + N ++LV K D+
Sbjct: 57 -----LTDDDFLKLLHEVGDSDALVVNVIDIFDFNGSVIPGLPRFVSGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W++E ++ L + V LTS+++ I V +I+ +KGRDVY++G
Sbjct: 112 LPKSVKPGKISQWLMERAHEEGLRPVDVVLTSAQNKHAIKEVIDKIEHYRKGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G+++ S PGTTL I+I G +YDTP
Sbjct: 172 TNVGKSTLINAIIQEITGDQNVITT---------SRFPGTTLDKIEI-PLDDGSYIYDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + A++L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLTAKNLKYVSPKKEIKPKTYQLNPEQ--------------TLFLGGLGR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + F+ L+++ + A FY K LG LTPP K+K D
Sbjct: 268 FDFISGEKQGFTAFF-DNELKLHRTKLEGASAFYDKHLGTLLTPPNSKEKE------DFP 320
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
+L++ F T + +D+ ISGLGWI V
Sbjct: 321 KLVQHVF--TIKDKTDLVISGLGWIRV 345
>gi|422871490|ref|ZP_16917983.1| GTP-binding protein [Streptococcus sanguinis SK1087]
gi|328945658|gb|EGG39809.1| GTP-binding protein [Streptococcus sanguinis SK1087]
Length = 368
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 124/392 (31%), Positives = 190/392 (48%), Gaps = 49/392 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT + GY E K + + C RC L H + I+ V
Sbjct: 6 CIGCGAIIQTEDKGKLGYTPQSALE---KGLEAGELYCQRCFRLRHYNEISDV------- 55
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
Q D LR L + AL+V +VD DFNGS + + N ++LV K D+
Sbjct: 56 ---QLTDDDFLR-LLHEVGDSDALVVNVVDSFDFNGSVIPGLPRFVAGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + V W+ E ++ L + V LTS+++ I + +I+ +KGRDVY++G
Sbjct: 112 LPKSVKDSKVTRWLTERAHEEGLRPVDVVLTSAQNKQAIKDLIDKIEHCRKGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G++D S PGTTL I+I G +YDTP
Sbjct: 172 TNVGKSTLINAIIQEITGDKDIITT---------SRFPGTTLDKIEI-PLADGSHIYDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + A++L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLSAKNLKYISPKKEIKPKTYQLNPEQ--------------TLFLGGLGR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + T Y L+++ A +FY K +G L PP+GK+K E + L
Sbjct: 268 FDFV-AGDKQGFTAYFDNELKLHRTKLQGASDFYDKHVGSLLVPPVGKEKEE-FPAL--- 322
Query: 460 RLLEIKFEDTERPASDVAISGLGWISVE-PVR 490
+K E T + +D+ SGLGWI V P R
Sbjct: 323 ----VKHEFTIKDKTDIVFSGLGWIRVSGPAR 350
>gi|148994934|ref|ZP_01823936.1| GTP-binding protein [Streptococcus pneumoniae SP9-BS68]
gi|418149106|ref|ZP_12785868.1| GTPase family protein [Streptococcus pneumoniae GA13856]
gi|419453700|ref|ZP_13993670.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae EU-NP03]
gi|419506630|ref|ZP_14046291.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA49194]
gi|421220833|ref|ZP_15677672.1| hypothetical protein AMCSP05_001569 [Streptococcus pneumoniae
2070425]
gi|421223087|ref|ZP_15679869.1| hypothetical protein AMCSP14_001511 [Streptococcus pneumoniae
2070531]
gi|147926936|gb|EDK77982.1| GTP-binding protein [Streptococcus pneumoniae SP9-BS68]
gi|353811442|gb|EHD91684.1| GTPase family protein [Streptococcus pneumoniae GA13856]
gi|379608544|gb|EHZ73290.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA49194]
gi|379625770|gb|EHZ90396.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae EU-NP03]
gi|395586743|gb|EJG47110.1| hypothetical protein AMCSP05_001569 [Streptococcus pneumoniae
2070425]
gi|395587067|gb|EJG47429.1| hypothetical protein AMCSP14_001511 [Streptococcus pneumoniae
2070531]
Length = 368
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 119/392 (30%), Positives = 193/392 (49%), Gaps = 48/392 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT++ G+ E K + V C RC L H + IT V
Sbjct: 6 CIGCGATIQTTDKAGLGFTPQSALE---KGLETGEVYCQRCFRLRHYNEITDVQ------ 56
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ + L + AL+V ++DI DFNGS + + N ++LV K D+
Sbjct: 57 -----LTNDDFLKLLHEVGDSNALVVNVIDIFDFNGSVIPGLPRFVSGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W+++ ++ L + V LTS+++ I V +I+ +KGRDVY++G
Sbjct: 112 LPKSVKSGKISQWLMKRAHEEGLRPVDVVLTSAQNKHAIKEVIDKIEHYRKGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G+++ S PGTTL I+I G +YDTP
Sbjct: 172 TNVGKSTLINAIIQEITGDQNVITT---------SRFPGTTLDKIEI-PLDDGSYIYDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + A++L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLTAKNLKYVSPKKEIKPKTYQLNPEQ--------------TLFLGGLGR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + F+ L+++ + A FY K LG LTPP K+K D
Sbjct: 268 FDFIAGEKQGFTAFF-DNELKLHRSKLEGASAFYDKHLGTLLTPPNSKEKE------DFP 320
Query: 460 RLLEIKFEDTERPASDVAISGLGWISVEPVRR 491
RL++ F T + +D+ ISGLGWI V + +
Sbjct: 321 RLVQHVF--TIKDKTDLVISGLGWIRVTGIAK 350
>gi|421859665|ref|ZP_16291869.1| predicted GTPase [Paenibacillus popilliae ATCC 14706]
gi|410830763|dbj|GAC42306.1| predicted GTPase [Paenibacillus popilliae ATCC 14706]
Length = 372
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 123/440 (27%), Positives = 197/440 (44%), Gaps = 75/440 (17%)
Query: 92 LKVNSAVASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMIT 151
+K N C GCG +QT +D GYV P + ++C RC + H +
Sbjct: 1 MKDNQEKQVCSGCGVTVQTGHADQLGYV-PAAALTRSP------LICQRCFRIKHYNEAA 53
Query: 152 AVGGNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPI 211
+V + D+ L + +E AL++ +VD+ DF+GS ++ ++ G NP+
Sbjct: 54 SVA-----------LDQDDFLRLLGRIGQEDALVIHIVDLFDFDGSVISGLQRFVGNNPV 102
Query: 212 ILVVTKVDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKK 271
+LVV K+DLLP+ T++N + +WV + L ++ V L S+K AG + ++ ++
Sbjct: 103 LLVVNKIDLLPRSTNWNRLTNWVQRQAKEHGLRIVDVMLVSAKRNAGFERLVEQMSHWRR 162
Query: 272 GRDVYILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLG 331
GRDVY++G+ NVGKS IN L+ + + S PGTTL + I
Sbjct: 163 GRDVYVVGATNVGKSTLINRLIHDYSDMERELTT--------SRYPGTTLDVVHI-PLDD 213
Query: 332 GGKLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFT 391
G + DTPG+ R + +DL AL P L+ + + NE G
Sbjct: 214 GKHIIDTPGIVYTSRLTELASRQDLGALLPDKPLKPSVYQL-------NE-------GQV 259
Query: 392 IFWGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAE 451
+F+G R D ++ ++ T Y L ++ D+AD Y++ G L+PP
Sbjct: 260 LFFGAFARFDFVEGERQS-FTCYISNGLPIHRTKLDRADALYKEHRGELLSPPT------ 312
Query: 452 GWKGLDRERLLEI------KFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSG 505
R+RL E+ ++ +D+ ISGLGWI G
Sbjct: 313 ------RDRLNELPAWTKHQYRIATGAETDIFISGLGWIKC--------------NGKEG 352
Query: 506 ELHLAVHVPKPVEVFVRNPM 525
L + +H PK V+V R M
Sbjct: 353 AL-VEIHAPKGVKVLTRRAM 371
>gi|421268909|ref|ZP_15719778.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae SPAR95]
gi|421307943|ref|ZP_15758585.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA60132]
gi|395869163|gb|EJG80279.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae SPAR95]
gi|395907328|gb|EJH18222.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA60132]
Length = 368
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 119/387 (30%), Positives = 191/387 (49%), Gaps = 48/387 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT++ G+ E K + V C RC L H + IT V
Sbjct: 6 CIGCGATIQTTDKAGLGFTPQSALE---KGLETGEVYCQRCFRLRHYNEITDVQ------ 56
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ + L + AL+V ++DI DFNGS + + N ++LV K D+
Sbjct: 57 -----LTNDDFLKLLHEVGDSNALVVNVIDIFDFNGSVIPGLPRFVSGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W+++ ++ L + V LTS+++ I V +I+ +KGRDVY++G
Sbjct: 112 LPKSVKSGKISQWLMKRAHEEGLRPVDVVLTSAQNKHAIKEVIDKIEHYRKGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G+++ S PGTTL I+I G +YDTP
Sbjct: 172 TNVGKSTLINAIIQEITGDQNVITT---------SRFPGTTLDKIEI-PLDDGSYIYDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + A++L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLTAKNLKYVSPKKEIKPKTYQLNPEQ--------------TLFLGGLGR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + F+ L+++ + A FY K LG LTPP K+K D
Sbjct: 268 FDFIAGEKQGFTAFF-DNELKLHRSKLEGASAFYDKHLGTLLTPPNSKEKE------DFP 320
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
RL++ F T + +D+ ISGLGWI V
Sbjct: 321 RLVQHVF--TIKDKTDLVISGLGWIRV 345
>gi|385260249|ref|ZP_10038398.1| ribosome biogenesis GTPase YqeH [Streptococcus sp. SK140]
gi|385192169|gb|EIF39579.1| ribosome biogenesis GTPase YqeH [Streptococcus sp. SK140]
Length = 368
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 119/387 (30%), Positives = 190/387 (49%), Gaps = 48/387 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT + G+ E K + V C RC L H + IT V
Sbjct: 6 CIGCGATIQTEDKTGLGFTPQSALE---KGLETGEVYCQRCFRLRHYNEITDVQ------ 56
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ + L + AL+V ++DI DFNGS + + N ++LV K D+
Sbjct: 57 -----LTDDDFLKLLHEVGDSDALVVNVIDIFDFNGSVIPGLPRFVSGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W++E ++ L + V LTS+++ I V +I+ +KGRDVY++G
Sbjct: 112 LPKSVKQGKISQWLMERAHEEGLRPVDVVLTSAQNKHAIREVIDKIEHYRKGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G+++ S PGTTL I+I G +YDTP
Sbjct: 172 TNVGKSTLINAIIQEITGDQNVITT---------SRFPGTTLDKIEI-PLDDGSYIYDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + A++L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLTAKNLKYVSPKKEIKPKTYQLNPEQ--------------TLFLGGLGR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + F+ L+++ + A FY K LG LTPP K+K D
Sbjct: 268 FDFIAGEKQGFTAFF-DNELKLHRTKLEGASAFYDKHLGTLLTPPNSKEKE------DFP 320
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
+L++ F T + +D+ ISGLGWI V
Sbjct: 321 KLVQHVF--TIKDKTDLVISGLGWIRV 345
>gi|148997805|ref|ZP_01825369.1| GTP-binding protein [Streptococcus pneumoniae SP11-BS70]
gi|168575059|ref|ZP_02721022.1| GTP-binding protein [Streptococcus pneumoniae MLV-016]
gi|307068375|ref|YP_003877341.1| putative GTPase [Streptococcus pneumoniae AP200]
gi|419471635|ref|ZP_14011494.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA07914]
gi|419504483|ref|ZP_14044151.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA47760]
gi|421239079|ref|ZP_15695643.1| GTP-binding protein [Streptococcus pneumoniae 2071247]
gi|421314623|ref|ZP_15765210.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA47562]
gi|147756304|gb|EDK63346.1| GTP-binding protein [Streptococcus pneumoniae SP11-BS70]
gi|183578795|gb|EDT99323.1| GTP-binding protein [Streptococcus pneumoniae MLV-016]
gi|306409912|gb|ADM85339.1| Predicted GTPase [Streptococcus pneumoniae AP200]
gi|379546351|gb|EHZ11490.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA07914]
gi|379605871|gb|EHZ70621.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA47760]
gi|395600722|gb|EJG60877.1| GTP-binding protein [Streptococcus pneumoniae 2071247]
gi|395913308|gb|EJH24161.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA47562]
Length = 368
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 119/392 (30%), Positives = 193/392 (49%), Gaps = 48/392 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT++ G+ E K + V C RC L H + IT V
Sbjct: 6 CIGCGATIQTTDKAGLGFTPQSALE---KGLETGEVYCQRCFRLRHYNEITDVQ------ 56
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ + L + AL+V ++DI DFNGS + + N ++LV K D+
Sbjct: 57 -----LTNDDFLKLLHEVGDSDALVVNVIDIFDFNGSVIPGLPRFVSGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W+++ ++ L + V LTS+++ I V +I+ +KGRDVY++G
Sbjct: 112 LPKSVKSGKISQWLMKRAYEEGLRPVDVVLTSAQNKHAIKEVIDKIEHYRKGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G+++ S PGTTL I+I G +YDTP
Sbjct: 172 TNVGKSTLINAIIQEITGDQNVITT---------SRFPGTTLDKIEI-PLDDGSYIYDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + A++L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLTAKNLKYVSPKKEIKPKTYQLNPEQ--------------TLFLGGLGR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + F+ L+++ + A FY K LG LTPP K+K D
Sbjct: 268 FDFIAGEKQGFTAFF-DNELKLHRSKLEGASAFYDKHLGTLLTPPNSKEKE------DFP 320
Query: 460 RLLEIKFEDTERPASDVAISGLGWISVEPVRR 491
RL++ F T + +D+ ISGLGWI V + +
Sbjct: 321 RLVQHVF--TIKDKTDLVISGLGWIRVTGIAK 350
>gi|225859501|ref|YP_002741011.1| GTP-binding protein YqeH [Streptococcus pneumoniae 70585]
gi|225722019|gb|ACO17873.1| GTP-binding protein [Streptococcus pneumoniae 70585]
Length = 368
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 119/392 (30%), Positives = 193/392 (49%), Gaps = 48/392 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT++ G+ E K + V C RC L H + IT V
Sbjct: 6 CIGCGATIQTTDKAGLGFTPQSALE---KGLETGEVYCQRCFRLRHYNKITDVQ------ 56
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ + L + AL+V ++DI DFNGS + + N ++LV K D+
Sbjct: 57 -----LTNDDFLKLLHEVGDSDALVVNVIDIFDFNGSVIPGLPRFVSGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W+++ ++ L + V LTS+++ I V +I+ +KGRDVY++G
Sbjct: 112 LPKSVKSGKISQWLMKRAHEEGLRPVDVVLTSAQNKHAIKEVIDKIEHYRKGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G+++ S PGTTL I+I G +YDTP
Sbjct: 172 TNVGKSTLINAIIQEITGDQNVITT---------SRFPGTTLDKIEI-PLDDGSYIYDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + A++L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLTAKNLKYVSPKKEIKPKTYQLNPEQ--------------TLFLGGLGR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + F+ L+++ + A FY K LG LTPP K+K D
Sbjct: 268 FDFIAGEKQGFTAFF-DNELKLHRSKLEGASAFYDKHLGTLLTPPNSKEKE------DFP 320
Query: 460 RLLEIKFEDTERPASDVAISGLGWISVEPVRR 491
RL++ F T + +D+ ISGLGWI V + +
Sbjct: 321 RLVQHVF--TIKDKTDLVISGLGWIRVTGIAK 350
>gi|383937703|ref|ZP_09990947.1| ribosome biogenesis GTPase YqeH [Streptococcus pseudopneumoniae
SK674]
gi|418968494|ref|ZP_13520084.1| ribosome biogenesis GTPase YqeH [Streptococcus pseudopneumoniae
ATCC BAA-960]
gi|383352598|gb|EID30283.1| ribosome biogenesis GTPase YqeH [Streptococcus pseudopneumoniae
ATCC BAA-960]
gi|383715431|gb|EID71393.1| ribosome biogenesis GTPase YqeH [Streptococcus pseudopneumoniae
SK674]
Length = 368
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 125/426 (29%), Positives = 203/426 (47%), Gaps = 65/426 (15%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT++ G+ E K + + C RC L H + IT V
Sbjct: 6 CIGCGATIQTTDKAGLGFTPQSALE---KGLETGEIYCQRCFRLRHYNEITDVQ------ 56
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ + L + AL+V +VDI DFNGS + + N ++LV K D+
Sbjct: 57 -----LTDDDFLKLLHEVGDSDALVVNVVDIFDFNGSVIPGLPRFVSGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W++E ++ L + V LTS+++ I V +I+ +KGRDVY++G
Sbjct: 112 LPKSVKPGKISQWLMERAHEEGLRPVDVVLTSAQNKHAIKEVIDKIEHYRKGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G+++ S PGTTL I+I G +YDTP
Sbjct: 172 TNVGKSTLINAIIQEITGDQNVITT---------SRFPGTTLDKIEI-PLDDGSYIYDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + A++L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLTAKNLKYVSPKKEIKPKTYQLNPEQ--------------TLFLGGLGR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + F+ L+++ + A FY K LG LTPP K+K D
Sbjct: 268 FDFIAGEKQGFTAFF-DNELKLHRTKLEGASAFYDKHLGTLLTPPNSKEKE------DFP 320
Query: 460 RLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVEV 519
+L++ F ++ +D+ ISGLGWI V +G +AV P+ V V
Sbjct: 321 KLVQHVFNIKDK--TDLVISGLGWIRV-----------------TGTAKVAVWAPEGVAV 361
Query: 520 FVRNPM 525
+R +
Sbjct: 362 VIRKAI 367
>gi|225861571|ref|YP_002743080.1| GTP-binding protein YqeH [Streptococcus pneumoniae Taiwan19F-14]
gi|298230643|ref|ZP_06964324.1| GTP-binding protein YqeH [Streptococcus pneumoniae str. Canada
MDR_19F]
gi|298254887|ref|ZP_06978473.1| GTP-binding protein YqeH [Streptococcus pneumoniae str. Canada
MDR_19A]
gi|298503494|ref|YP_003725434.1| GTP-binding protein [Streptococcus pneumoniae TCH8431/19A]
gi|387788790|ref|YP_006253858.1| GTP-binding protein YqeH [Streptococcus pneumoniae ST556]
gi|417313225|ref|ZP_12099937.1| GTPase family protein [Streptococcus pneumoniae GA04375]
gi|417696913|ref|ZP_12346091.1| GTPase family protein [Streptococcus pneumoniae GA47368]
gi|418083554|ref|ZP_12720751.1| hypothetical protein SPAR81_1644 [Streptococcus pneumoniae GA44288]
gi|418085738|ref|ZP_12722917.1| hypothetical protein SPAR90_1643 [Streptococcus pneumoniae GA47281]
gi|418092354|ref|ZP_12729494.1| hypothetical protein SPAR84_1728 [Streptococcus pneumoniae GA44452]
gi|418094540|ref|ZP_12731667.1| hypothetical protein SPAR110_1668 [Streptococcus pneumoniae
GA49138]
gi|418101207|ref|ZP_12738290.1| hypothetical protein SPAR128_1626 [Streptococcus pneumoniae
7286-06]
gi|418110719|ref|ZP_12747738.1| hypothetical protein SPAR113_1792 [Streptococcus pneumoniae
GA49447]
gi|418119198|ref|ZP_12756155.1| hypothetical protein SPAR54_1239 [Streptococcus pneumoniae GA18523]
gi|418142264|ref|ZP_12779076.1| GTPase family protein [Streptococcus pneumoniae GA13455]
gi|418151253|ref|ZP_12787999.1| GTPase family protein [Streptococcus pneumoniae GA14798]
gi|418153491|ref|ZP_12790229.1| GTPase family protein [Streptococcus pneumoniae GA16121]
gi|418169850|ref|ZP_12806491.1| GTPase family protein [Streptococcus pneumoniae GA19077]
gi|418171883|ref|ZP_12808507.1| GTPase family protein [Streptococcus pneumoniae GA19451]
gi|418196404|ref|ZP_12832880.1| GTPase family protein [Streptococcus pneumoniae GA47688]
gi|418198573|ref|ZP_12835031.1| GTPase family protein [Streptococcus pneumoniae GA47778]
gi|418221782|ref|ZP_12848435.1| hypothetical protein SPAR104_1715 [Streptococcus pneumoniae
GA47751]
gi|418223946|ref|ZP_12850586.1| hypothetical protein SPAR127_1647 [Streptococcus pneumoniae
5185-06]
gi|419423654|ref|ZP_13963867.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA43264]
gi|419425687|ref|ZP_13965883.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae 7533-05]
gi|419427799|ref|ZP_13967980.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae 5652-06]
gi|419429945|ref|ZP_13970109.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA11856]
gi|419436543|ref|ZP_13976630.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae 8190-05]
gi|419438785|ref|ZP_13978853.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA13499]
gi|419445250|ref|ZP_13985265.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA19923]
gi|419447406|ref|ZP_13987411.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae 7879-04]
gi|419449531|ref|ZP_13989527.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae 4075-00]
gi|419450874|ref|ZP_13990860.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae EU-NP02]
gi|419489279|ref|ZP_14029028.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA44386]
gi|419502399|ref|ZP_14042083.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA47628]
gi|419519457|ref|ZP_14059063.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA08825]
gi|419528086|ref|ZP_14067629.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA17719]
gi|421273405|ref|ZP_15724245.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae SPAR55]
gi|421288015|ref|ZP_15738778.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA58771]
gi|225726735|gb|ACO22586.1| GTP-binding protein [Streptococcus pneumoniae Taiwan19F-14]
gi|298239089|gb|ADI70220.1| GTP-binding protein [Streptococcus pneumoniae TCH8431/19A]
gi|327389933|gb|EGE88278.1| GTPase family protein [Streptococcus pneumoniae GA04375]
gi|332200311|gb|EGJ14384.1| GTPase family protein [Streptococcus pneumoniae GA47368]
gi|353754774|gb|EHD35386.1| hypothetical protein SPAR81_1644 [Streptococcus pneumoniae GA44288]
gi|353756447|gb|EHD37048.1| hypothetical protein SPAR90_1643 [Streptococcus pneumoniae GA47281]
gi|353763054|gb|EHD43611.1| hypothetical protein SPAR84_1728 [Streptococcus pneumoniae GA44452]
gi|353765036|gb|EHD45584.1| hypothetical protein SPAR110_1668 [Streptococcus pneumoniae
GA49138]
gi|353770707|gb|EHD51219.1| hypothetical protein SPAR128_1626 [Streptococcus pneumoniae
7286-06]
gi|353781340|gb|EHD61785.1| hypothetical protein SPAR113_1792 [Streptococcus pneumoniae
GA49447]
gi|353791150|gb|EHD71531.1| hypothetical protein SPAR54_1239 [Streptococcus pneumoniae GA18523]
gi|353804497|gb|EHD84778.1| GTPase family protein [Streptococcus pneumoniae GA13455]
gi|353814463|gb|EHD94689.1| GTPase family protein [Streptococcus pneumoniae GA14798]
gi|353817042|gb|EHD97250.1| GTPase family protein [Streptococcus pneumoniae GA16121]
gi|353833829|gb|EHE13937.1| GTPase family protein [Streptococcus pneumoniae GA19077]
gi|353835620|gb|EHE15714.1| GTPase family protein [Streptococcus pneumoniae GA19451]
gi|353860415|gb|EHE40360.1| GTPase family protein [Streptococcus pneumoniae GA47688]
gi|353861683|gb|EHE41618.1| GTPase family protein [Streptococcus pneumoniae GA47778]
gi|353875092|gb|EHE54946.1| hypothetical protein SPAR104_1715 [Streptococcus pneumoniae
GA47751]
gi|353878744|gb|EHE58574.1| hypothetical protein SPAR127_1647 [Streptococcus pneumoniae
5185-06]
gi|379138532|gb|AFC95323.1| GTP-binding protein YqeH [Streptococcus pneumoniae ST556]
gi|379537192|gb|EHZ02377.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA13499]
gi|379550123|gb|EHZ15225.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA11856]
gi|379566239|gb|EHZ31230.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA17719]
gi|379572943|gb|EHZ37900.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA19923]
gi|379586226|gb|EHZ51080.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA43264]
gi|379586821|gb|EHZ51671.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA44386]
gi|379600612|gb|EHZ65393.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA47628]
gi|379612982|gb|EHZ77697.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae 8190-05]
gi|379614946|gb|EHZ79656.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae 7879-04]
gi|379617992|gb|EHZ82672.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae 5652-06]
gi|379619148|gb|EHZ83822.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae 7533-05]
gi|379622149|gb|EHZ86785.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae 4075-00]
gi|379622579|gb|EHZ87213.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae EU-NP02]
gi|379641294|gb|EIA05832.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA08825]
gi|395873836|gb|EJG84926.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae SPAR55]
gi|395886578|gb|EJG97594.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA58771]
Length = 368
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 126/426 (29%), Positives = 203/426 (47%), Gaps = 65/426 (15%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT++ G+ E K + V C RC L H + IT V
Sbjct: 6 CIGCGATIQTTDKAGLGFTPQSALE---KGLETGEVYCQRCFRLRHYNEITDVQ------ 56
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ + L + AL+V ++DI DFNGS + + N ++LV K D+
Sbjct: 57 -----LTNDDFLKLLHEVGDSDALVVNVIDIFDFNGSVIPGLPRFVSGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W+++ ++ L + V LTS+++ I V +I+ +KGRDVY++G
Sbjct: 112 LPKSVKSGKISQWLMKRAHEEGLRPVDVVLTSAQNKHAIKEVIDKIEHYRKGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G+++ S PGTTL I+I G +YDTP
Sbjct: 172 TNVGKSTLINAIIQEITGDQNVITT---------SRFPGTTLDKIEI-PLDDGSYIYDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + A++L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLTAKNLKYVSPKKEIKPKTYQLNPEQ--------------TLFLGGLGR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + F+ L+++ + A FY K LG LTPP K+K D
Sbjct: 268 FDFIAGEKQGFTAFF-DNELKLHRSKLEGASAFYDKHLGTLLTPPNSKEKE------DFP 320
Query: 460 RLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVEV 519
RL++ F T + +D+ ISGLGWI V +G +AV P+ V V
Sbjct: 321 RLVQHVF--TIKDKTDLVISGLGWIRV-----------------TGIAKVAVWAPEGVAV 361
Query: 520 FVRNPM 525
+R +
Sbjct: 362 VIRKAI 367
>gi|307710602|ref|ZP_07647036.1| conserved hypothetical protein [Streptococcus mitis SK564]
gi|307618647|gb|EFN97789.1| conserved hypothetical protein [Streptococcus mitis SK564]
Length = 368
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 118/387 (30%), Positives = 191/387 (49%), Gaps = 48/387 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT++ G+ E K + V C RC L H + IT V
Sbjct: 6 CIGCGATIQTTDKAGLGFTPQSALE---KGLETGEVYCQRCFRLRHYNEITDVQ------ 56
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ + L + AL+V ++DI DFNGS + + N ++LV K D+
Sbjct: 57 -----LTDDDFLKLLHEVGDSDALVVNVIDIFDFNGSVIPGLPRFVSGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W++E ++ L + V LTS+++ I V +I+ +KGRDVY++G
Sbjct: 112 LPKSVKPGKISQWLMERAHEEGLRPVDVVLTSAQNKQAIKEVIDKIEHYRKGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G+++ S PGTTL I+I G +YDTP
Sbjct: 172 TNVGKSTLINAIIQEITGDQNVITT---------SRFPGTTLDKIEI-PLDDGSYIYDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + A++L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLTAKNLKYVSPKKEIKPKTYQLNPEQ--------------TLFLGGLGR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + F+ L+++ + A FY K +G LTPP K+K D
Sbjct: 268 FDFIAGEKQGFTAFF-DNELKLHRTKLEGASAFYNKHVGTLLTPPNSKEKE------DFP 320
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
+L++ F E+ +D+ ISGLGWI V
Sbjct: 321 KLVQHVFNIKEK--TDLVISGLGWIRV 345
>gi|227543936|ref|ZP_03973985.1| GTP-binding protein [Lactobacillus reuteri CF48-3A]
gi|338202609|ref|YP_004648754.1| GTP-binding protein [Lactobacillus reuteri SD2112]
gi|227186087|gb|EEI66158.1| GTP-binding protein [Lactobacillus reuteri CF48-3A]
gi|336447849|gb|AEI56464.1| GTP-binding protein [Lactobacillus reuteri SD2112]
Length = 375
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 130/425 (30%), Positives = 193/425 (45%), Gaps = 63/425 (14%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG+ +QT + + GY E K+ + + C RC L H + I V
Sbjct: 13 CIGCGSIIQTEDPNGLGYTPKSALERGKETGE---LYCQRCFRLRHYNEIAPVS------ 63
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ L+ +R ALIV +VD+ DFNGS + + G NP++LV K DL
Sbjct: 64 -----LTDDDFLRLLNQIRDANALIVYVVDVFDFNGSLIPGLHRFVGDNPVLLVGNKEDL 118
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LP+ + DW+ + L + L S+K I + I+K + RDVY++G
Sbjct: 119 LPRSLRRPKLTDWIRQQANIAGLRPIDTVLVSAKKNHQIDHLLDVIEKYRHNRDVYVVGV 178
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS IN ++K+ K S PGTTL I+I G L DTPG
Sbjct: 179 TNVGKSTLINQIIKQ--------RTGVKELITTSRFPGTTLDKIEI-PLDDGHVLVDTPG 229
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ + A V+ +DL +APQ ++ +++ + +G T+F GG+ R
Sbjct: 230 IIHQEQMAHVLSPKDLKIVAPQKEIKPKTYQLN--------------DGQTLFLGGVARF 275
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D L + Y +L ++ AD FY K LG LTPP +K +G+ L+R
Sbjct: 276 DYLHG-ERAGMVAYFDNNLPIHRTKLSNADNFYAKHLGDLLTPPTSDEK-DGFPPLER-- 331
Query: 461 LLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVEVF 520
+F TE+ SD+ GLGWI+V P + ++ A VPK V
Sbjct: 332 ---YEFHITEK--SDIVFEGLGWITV-PAKTTV----------------AAWVPKGVGAL 369
Query: 521 VRNPM 525
VR M
Sbjct: 370 VRRAM 374
>gi|387626936|ref|YP_006063112.1| GTP-binding protein [Streptococcus pneumoniae INV104]
gi|444382383|ref|ZP_21180586.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae PCS8106]
gi|444385619|ref|ZP_21183691.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae PCS8203]
gi|301794722|emb|CBW37173.1| GTP-binding protein [Streptococcus pneumoniae INV104]
gi|444249689|gb|ELU56177.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae PCS8203]
gi|444252657|gb|ELU59119.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae PCS8106]
Length = 368
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 119/387 (30%), Positives = 191/387 (49%), Gaps = 48/387 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT++ G+ E K + V C RC L H + IT V
Sbjct: 6 CIGCGATIQTTDKAGLGFTPQSALE---KGLETGEVYCQRCFRLRHYNEITDVQ------ 56
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ + L + AL+V ++DI DFNGS + + N ++LV K D+
Sbjct: 57 -----LTNDDFLKLLHEVGDSDALVVNVIDIFDFNGSVIPGLPRFVSGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W+++ ++ L + V LTS+++ I V +I+ +KGRDVY++G
Sbjct: 112 LPKSVKSGKISQWLMKRAHEEGLRPVDVVLTSAQNKHAIKEVIDKIEHYRKGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G+++ S PGTTL I+I G +YDTP
Sbjct: 172 TNVGKSTLINAIIQEITGDQNVITT---------SRFPGTTLDKIEI-PLDDGSYIYDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + A++L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLTAKNLKYVSPKKEIKPKTYQLNPEQ--------------TLFLGGLGR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + F+ L+++ + A FY K LG LTPP K+K D
Sbjct: 268 FDFIAGEKQGFTAFF-DNELKLHRSKLEGASAFYDKHLGTLLTPPNSKEKE------DFP 320
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
RL++ F T + +D+ ISGLGWI V
Sbjct: 321 RLVQHVF--TIKDKTDLVISGLGWIRV 345
>gi|322377769|ref|ZP_08052258.1| ribosome biogenesis GTPase YqeH [Streptococcus sp. M334]
gi|321281192|gb|EFX58203.1| ribosome biogenesis GTPase YqeH [Streptococcus sp. M334]
Length = 368
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 119/392 (30%), Positives = 193/392 (49%), Gaps = 48/392 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT++ G+ E K + V C RC L H + IT V
Sbjct: 6 CIGCGATIQTTDKAGLGFTPQSALE---KGLETGEVYCQRCFRLRHYNEITDVQ------ 56
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ + L + AL+V ++DI DFNGS + + N ++LV K D+
Sbjct: 57 -----LTDDDFLKLLHEVGDSDALVVNVIDIFDFNGSVIPGLPRFVSGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W++E ++ L + V LTS+++ I V +I+ +KGRDVY++G
Sbjct: 112 LPKSVKPGKISQWLMERAHEEGLRPVDVVLTSAQNKHAIKEVIDKIEHYRKGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G+++ S PGTTL I+I G +YDTP
Sbjct: 172 TNVGKSTLINAIIQEITGDQNVITT---------SRFPGTTLDKIEI-PLDDGSYIYDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + A++L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLTAKNLKYVSPKKEIKPKTYQLNPEQ--------------TLFLGGLGR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + F+ L+++ + A FY K LG LTPP K+K D
Sbjct: 268 FDFIAGEKQGFTAFF-DNELKLHRTKLEGASAFYDKHLGTLLTPPNSKEKE------DFP 320
Query: 460 RLLEIKFEDTERPASDVAISGLGWISVEPVRR 491
+L++ F T + +D+ ISGLGWI V + +
Sbjct: 321 KLVQHVF--TIKDKTDLVISGLGWIRVTGIAK 350
>gi|152976765|ref|YP_001376282.1| GTP-binding protein YqeH [Bacillus cytotoxicus NVH 391-98]
gi|152025517|gb|ABS23287.1| Nitric-oxide synthase [Bacillus cytotoxicus NVH 391-98]
Length = 368
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 124/428 (28%), Positives = 190/428 (44%), Gaps = 70/428 (16%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG +QT GY + Q + V+C RC L + + I V
Sbjct: 7 CIGCGVEIQTENKSEVGYAPASSL-------QKEQVICQRCFRLKNYNEIQDVS------ 53
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ L+ + + +AL+VK+VDI DFNGS+L + G N ++LV K DL
Sbjct: 54 -----LTDDDFLRILNGIGQSEALVVKIVDIFDFNGSWLPGLHRFVGNNKVLLVGNKADL 108
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
+PK + + W+ + + L V L S+ GI +A I+K + G+DVY++G
Sbjct: 109 IPKSVKHDKMKHWMRYSAKQLGLKAEDVFLISAAKGQGIQELAEAIEKYRNGKDVYVVGC 168
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS FIN ++K+ E + PGTTL I I LYDTPG
Sbjct: 169 TNVGKSTFINRMIKEFSEETENVITTSHF-------PGTTLDLIDI-PLDDTSSLYDTPG 220
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ HH+ A V + L + P ++ F + E T+F+ GL R
Sbjct: 221 IINHHQMAHYVGKQSLKIITPTKEIKPMVFQLNEEQ--------------TLFFSGLARF 266
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D + T Y L ++ +KAD+ ++K G L PP ++ E
Sbjct: 267 DYVSG-GRRSFTCYFSNRLTIHRTKLEKADQLHEKHAGELLNPPTPEE---------LES 316
Query: 461 LLE-IKFE-DTERPASDVAISGLGWISV-EPVRRSIRNSDINLESTSGELHLAVHVPKPV 517
+ E +K+E + P +DV SGLGW++V EP + + H+PK V
Sbjct: 317 MPEFVKYEFNIREPKTDVVFSGLGWVTVNEPGAK-----------------IVAHIPKGV 359
Query: 518 EVFVRNPM 525
V +R +
Sbjct: 360 SVSLRKSL 367
>gi|419480588|ref|ZP_14020392.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA19101]
gi|419500293|ref|ZP_14039987.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA47597]
gi|379569757|gb|EHZ34724.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA19101]
gi|379599601|gb|EHZ64384.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA47597]
gi|429316588|emb|CCP36296.1| GTP-binding protein [Streptococcus pneumoniae SPN034156]
Length = 368
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 119/387 (30%), Positives = 191/387 (49%), Gaps = 48/387 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT++ G+ E K + V C RC L H + IT V
Sbjct: 6 CIGCGATIQTTDKAGLGFTPQSALE---KGLETGEVYCQRCFRLRHYNEITDVQ------ 56
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ + L + AL+V ++DI DFNGS + + N ++LV K D+
Sbjct: 57 -----LTNDDFLKFLHEVGDSDALVVNVIDIFDFNGSVIPGLPRFVSGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W+++ ++ L + V LTS+++ I V +I+ +KGRDVY++G
Sbjct: 112 LPKSVKSGKISQWLMKRAHEEGLRPVDVVLTSAQNKHAIKEVIDKIEHYRKGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G+++ S PGTTL I+I G +YDTP
Sbjct: 172 TNVGKSTLINAIIQEITGDQNVITT---------SRFPGTTLDKIEI-PLDDGSYIYDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + A++L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLTAKNLKYVSPKKEIKPKTYQLNPEQ--------------TLFLGGLGR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + F+ L+++ + A FY K LG LTPP K+K D
Sbjct: 268 FDFIAGEKQGFTAFF-DNELKLHRSKLEGASAFYDKHLGTLLTPPNSKEKE------DFP 320
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
RL++ F T + +D+ ISGLGWI V
Sbjct: 321 RLVQHVF--TIKDKTDLVISGLGWIRV 345
>gi|345020328|ref|ZP_08783941.1| GTPase YqeH [Ornithinibacillus scapharcae TW25]
Length = 366
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 122/426 (28%), Positives = 196/426 (46%), Gaps = 67/426 (15%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG +QT + GY + E + +LC RC L H + I V
Sbjct: 6 CMGCGVEVQTDNPEGLGYTPKSSLEKEN-------ILCKRCFRLKHYNEIQDVS------ 52
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
+ D+ + +S +R + L+V ++DI D NG+ + + + G NPIILV K+DL
Sbjct: 53 -----IHDDDFLKMVSSIRDREGLVVHIIDIFDVNGTMIKSLPRIVGDNPIILVGNKMDL 107
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK T+ N + W+ + + L V V L SS GI + S+I+ ++ +DV+I+G+
Sbjct: 108 LPKSTNQNKLVQWLRSSAKEIGLKVQDVFLISSVKGFGIEELTSQIEYYRENKDVFIVGT 167
Query: 281 ANVGKSAFINALLKK-MGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS FIN L+K+ +GE D S PGTTLG I+I L DTP
Sbjct: 168 TNVGKSTFINRLIKQSIGESDVITT---------SYFPGTTLGFIEI-PLDDDAALIDTP 217
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ + A + +DL + P ++ + + + + T+F+GGL R
Sbjct: 218 GIVNQEQIAHYISDKDLKIVTPTKEIKPRVYQLNPQQ--------------TLFFGGLAR 263
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
+D +K ++ + ++ L ++ +KADE Y+ +G L+PP E K L
Sbjct: 264 LDFIKGDRQSFVCYFS-NQLPIHRTKLEKADELYENHVGELLSPP----DEESIKLLPEM 318
Query: 460 RLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVEV 519
K + + +D+ GLGW++V ++ H PK V V
Sbjct: 319 TSSAFKLQGEK---TDIVFPGLGWVTVMGTNTTV----------------VAHSPKEVAV 359
Query: 520 FVRNPM 525
+R +
Sbjct: 360 SIRKSL 365
>gi|228923088|ref|ZP_04086380.1| hypothetical protein bthur0011_40680 [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
gi|423582543|ref|ZP_17558654.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VD014]
gi|228836586|gb|EEM81935.1| hypothetical protein bthur0011_40680 [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
gi|401213422|gb|EJR20163.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VD014]
Length = 368
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 125/428 (29%), Positives = 190/428 (44%), Gaps = 70/428 (16%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG +QT + GY + E ++ V+C RC L H + I V
Sbjct: 7 CIGCGVEIQTENKNEVGYAPASSLEKEQ-------VICQRCFRLKHYNEIQDVS------ 53
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ L+ + + AL+VK+VDI DFNGS+L + G N ++LV K DL
Sbjct: 54 -----LTDDDFLRILNGIGKSDALVVKIVDIFDFNGSWLPGLHRFVGNNKVLLVGNKADL 108
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
+PK + V W+ + + L V L S+ GI +A I+ + G+DVY++G
Sbjct: 109 IPKSVKHDKVKHWMRYSAKQLGLKPEDVFLISAAKGQGIAELADAIEYYRGGKDVYVVGC 168
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS FIN ++K+ + + PGTTL I I LYDTPG
Sbjct: 169 TNVGKSTFINRMIKEFSDETENVITTSHF-------PGTTLDLIDI-PLDEESSLYDTPG 220
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ HH+ A V + L + P ++ F + E T+F+ GL R
Sbjct: 221 IINHHQMAHYVGKQSLKLITPTKEIKPMVFQLNEEQ--------------TLFFSGLARF 266
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D + T + L ++ +KADE Y+ G L+PP ++ E
Sbjct: 267 DYVSG-GRRAFTCHFSNRLTIHRTKLEKADELYKNHAGDLLSPPTPEE---------LEN 316
Query: 461 LLE-IKFE-DTERPASDVAISGLGWISV-EPVRRSIRNSDINLESTSGELHLAVHVPKPV 517
+ E +K+E + P +DV SGLGW++V EP + + HVPK V
Sbjct: 317 MPELVKYEFNIREPKTDVVFSGLGWVTVNEPGAK-----------------IVAHVPKGV 359
Query: 518 EVFVRNPM 525
V +R +
Sbjct: 360 SVSLRKSL 367
>gi|168493658|ref|ZP_02717801.1| GTP-binding protein [Streptococcus pneumoniae CDC3059-06]
gi|418074577|ref|ZP_12711828.1| GTPase family protein [Streptococcus pneumoniae GA11184]
gi|418076966|ref|ZP_12714199.1| hypothetical protein SPAR98_1893 [Streptococcus pneumoniae GA47502]
gi|418090106|ref|ZP_12727260.1| hypothetical protein SPAR77_1696 [Streptococcus pneumoniae GA43265]
gi|418099071|ref|ZP_12736168.1| hypothetical protein SPAR122_1653 [Streptococcus pneumoniae
6901-05]
gi|418105855|ref|ZP_12742911.1| hypothetical protein SPAR85_1783 [Streptococcus pneumoniae GA44500]
gi|418115265|ref|ZP_12752251.1| hypothetical protein SPAR125_1666 [Streptococcus pneumoniae
5787-06]
gi|418117423|ref|ZP_12754392.1| hypothetical protein SPAR124_1638 [Streptococcus pneumoniae
6963-05]
gi|418134603|ref|ZP_12771460.1| hypothetical protein SPAR23_0873 [Streptococcus pneumoniae GA11426]
gi|418174140|ref|ZP_12810752.1| GTPase family protein [Streptococcus pneumoniae GA41277]
gi|418217193|ref|ZP_12843873.1| GTPase family protein [Streptococcus pneumoniae Netherlands15B-37]
gi|419432124|ref|ZP_13972257.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae EU-NP05]
gi|419434026|ref|ZP_13974144.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA40183]
gi|419440933|ref|ZP_13980978.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA40410]
gi|419465062|ref|ZP_14004953.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA04175]
gi|419469549|ref|ZP_14009417.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA06083]
gi|419498116|ref|ZP_14037823.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA47522]
gi|419535212|ref|ZP_14074711.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA17457]
gi|421281736|ref|ZP_15732533.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA04672]
gi|421310151|ref|ZP_15760776.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA62681]
gi|183576456|gb|EDT96984.1| GTP-binding protein [Streptococcus pneumoniae CDC3059-06]
gi|353747106|gb|EHD27764.1| hypothetical protein SPAR98_1893 [Streptococcus pneumoniae GA47502]
gi|353747178|gb|EHD27835.1| GTPase family protein [Streptococcus pneumoniae GA11184]
gi|353761297|gb|EHD41869.1| hypothetical protein SPAR77_1696 [Streptococcus pneumoniae GA43265]
gi|353769053|gb|EHD49575.1| hypothetical protein SPAR122_1653 [Streptococcus pneumoniae
6901-05]
gi|353776031|gb|EHD56510.1| hypothetical protein SPAR85_1783 [Streptococcus pneumoniae GA44500]
gi|353785349|gb|EHD65768.1| hypothetical protein SPAR125_1666 [Streptococcus pneumoniae
5787-06]
gi|353788104|gb|EHD68502.1| hypothetical protein SPAR124_1638 [Streptococcus pneumoniae
6963-05]
gi|353838096|gb|EHE18177.1| GTPase family protein [Streptococcus pneumoniae GA41277]
gi|353870466|gb|EHE50339.1| GTPase family protein [Streptococcus pneumoniae Netherlands15B-37]
gi|353901840|gb|EHE77370.1| hypothetical protein SPAR23_0873 [Streptococcus pneumoniae GA11426]
gi|379536662|gb|EHZ01848.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA04175]
gi|379544353|gb|EHZ09498.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA06083]
gi|379563373|gb|EHZ28377.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA17457]
gi|379577027|gb|EHZ41951.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA40183]
gi|379578003|gb|EHZ42920.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA40410]
gi|379598949|gb|EHZ63734.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA47522]
gi|379629205|gb|EHZ93806.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae EU-NP05]
gi|395881001|gb|EJG92052.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA04672]
gi|395909766|gb|EJH20641.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA62681]
Length = 368
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 119/387 (30%), Positives = 191/387 (49%), Gaps = 48/387 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT++ G+ E K + V C RC L H + IT V
Sbjct: 6 CIGCGATIQTTDKAGLGFTPQSALE---KGLETGEVYCQRCFRLRHYNEITDVQ------ 56
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ + L + AL+V ++DI DFNGS + + N ++LV K D+
Sbjct: 57 -----LTNDDFLKLLHEVGDSDALVVNVIDIFDFNGSVIPGLPRFVSGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W+++ ++ L + V LTS+++ I V +I+ +KGRDVY++G
Sbjct: 112 LPKSVKSGKISQWLMKRAYEEGLRPVDVVLTSAQNKHAIKEVIDKIEHYRKGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G+++ S PGTTL I+I G +YDTP
Sbjct: 172 TNVGKSTLINAIIQEITGDQNVITT---------SRFPGTTLDKIEI-PLDDGSYIYDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + A++L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLTAKNLKYVSPKKEIKPKTYQLNPEQ--------------TLFLGGLGR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + F+ L+++ + A FY K LG LTPP K+K D
Sbjct: 268 FDFIAGEKQGFTAFF-DNELKLHRSKLEGASAFYDKHLGTLLTPPNSKEKE------DFP 320
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
RL++ F T + +D+ ISGLGWI V
Sbjct: 321 RLVQHVF--TIKDKTDLVISGLGWIRV 345
>gi|15903636|ref|NP_359186.1| GTP-binding protein YqeH [Streptococcus pneumoniae R6]
gi|116516270|ref|YP_817012.1| GTP-binding protein YqeH [Streptococcus pneumoniae D39]
gi|418200723|ref|ZP_12837166.1| hypothetical protein SPAR109_1706 [Streptococcus pneumoniae
GA47976]
gi|421211617|ref|ZP_15668599.1| hypothetical protein AMCSP03_001638 [Streptococcus pneumoniae
2070035]
gi|421232451|ref|ZP_15689092.1| hypothetical protein AMCSP16_001610 [Streptococcus pneumoniae
2080076]
gi|421266746|ref|ZP_15717626.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae SPAR27]
gi|15459261|gb|AAL00397.1| Conserved hypothetical protein [Streptococcus pneumoniae R6]
gi|116076846|gb|ABJ54566.1| GTP-binding protein [Streptococcus pneumoniae D39]
gi|353864264|gb|EHE44182.1| hypothetical protein SPAR109_1706 [Streptococcus pneumoniae
GA47976]
gi|395572725|gb|EJG33320.1| hypothetical protein AMCSP03_001638 [Streptococcus pneumoniae
2070035]
gi|395594954|gb|EJG55189.1| hypothetical protein AMCSP16_001610 [Streptococcus pneumoniae
2080076]
gi|395866814|gb|EJG77942.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae SPAR27]
Length = 368
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 119/392 (30%), Positives = 193/392 (49%), Gaps = 48/392 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT++ G+ E K + V C RC L H + IT V
Sbjct: 6 CIGCGATIQTTDKAGLGFTPQSALE---KGLETGEVYCQRCFRLRHYNEITDVQ------ 56
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ + L + AL+V ++DI DFNGS + + N ++LV K D+
Sbjct: 57 -----LTDDDFLKLLHEVGDSDALVVNVIDIFDFNGSVIPGLPRFVSGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W+++ ++ L + V LTS+++ I V +I+ +KGRDVY++G
Sbjct: 112 LPKSVKSGKISQWLMKRAHEEGLRPVDVVLTSAQNKYAIKEVIDKIEHYRKGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G+++ S PGTTL I+I G +YDTP
Sbjct: 172 TNVGKSTLINAIIQEITGDQNVITT---------SRFPGTTLDKIEI-PLDDGSYIYDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + A++L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLTAKNLKYVSPKKEIKPKTYQLNPEQ--------------TLFLGGLGR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + F+ L+++ + A FY K LG LTPP K+K D
Sbjct: 268 FDFIAGEKQGFTAFF-DNELKLHRSKLEGASAFYDKHLGTLLTPPNSKEKE------DFP 320
Query: 460 RLLEIKFEDTERPASDVAISGLGWISVEPVRR 491
RL++ F T + +D+ ISGLGWI V + +
Sbjct: 321 RLVQHVF--TIKDKTDLVISGLGWIRVTGIAK 350
>gi|222152534|ref|YP_002561709.1| GTP-binding protein YqeH [Streptococcus uberis 0140J]
gi|222113345|emb|CAR40947.1| GTP-binding protein [Streptococcus uberis 0140J]
Length = 372
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 117/388 (30%), Positives = 188/388 (48%), Gaps = 50/388 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG +QT + + G+ E K + + C RC L H + IT V
Sbjct: 6 CIGCGIRIQTEDKNLAGFTPKAALE---KGLESGELYCQRCFRLRHYNEITDV------- 55
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ DE + L + AL+V +VDI DFNGS + + N ++LV K D+
Sbjct: 56 ----HITDDEFLKLLHEVGDSDALVVNVVDIFDFNGSIIPGLSRFVAGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + V W++E ++ L + V LTS+++ I + S I + +KGRDVY++G
Sbjct: 112 LPKSVKDSKVTQWLIERAYEEGLRPVDVFLTSAQNKYAIKELISRIDQLRKGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G++D S PGTTL I+I G ++DTP
Sbjct: 172 TNVGKSTLINAIIQEITGDKDIITT---------SRFPGTTLDKIEI-PLDDGSFIFDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + +DL ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLSDKDLKYVSPKKEIKPKTYQLNPEQ--------------TLFLGGLGR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + T Y +L+++ + A +FYQK LG L PP +D+E
Sbjct: 268 FDFVSG-EKQGFTAYFDNNLKIHRTKLEGASDFYQKHLGSLLLPP---------NHIDKE 317
Query: 460 RLLEI-KFEDTERPASDVAISGLGWISV 486
++ F+ T D+ SGLGWI +
Sbjct: 318 SFPKLSSFDFTINSKMDLVFSGLGWIRI 345
>gi|148544461|ref|YP_001271831.1| GTP-binding protein YqeH [Lactobacillus reuteri DSM 20016]
gi|184153826|ref|YP_001842167.1| GTP-binding protein YqeH [Lactobacillus reuteri JCM 1112]
gi|227363111|ref|ZP_03847246.1| GTP-binding protein YqeH [Lactobacillus reuteri MM2-3]
gi|325682783|ref|ZP_08162299.1| GTP-binding protein [Lactobacillus reuteri MM4-1A]
gi|148531495|gb|ABQ83494.1| Nitric-oxide synthase [Lactobacillus reuteri DSM 20016]
gi|183225170|dbj|BAG25687.1| GTPase [Lactobacillus reuteri JCM 1112]
gi|227071829|gb|EEI10117.1| GTP-binding protein YqeH [Lactobacillus reuteri MM2-3]
gi|324977133|gb|EGC14084.1| GTP-binding protein [Lactobacillus reuteri MM4-1A]
Length = 375
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 130/425 (30%), Positives = 193/425 (45%), Gaps = 63/425 (14%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG+ +QT + + GY E K+ + + C RC L H + I V
Sbjct: 13 CIGCGSIIQTEDPNGLGYTPKSALEKGKETGE---LYCQRCFRLRHYNEIAPVS------ 63
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ L+ +R ALIV +VD+ DFNGS + + G NP++LV K DL
Sbjct: 64 -----LTDDDFLRLLNQIRDANALIVYVVDVFDFNGSLIPGLHRFVGDNPVLLVGNKEDL 118
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LP+ + DW+ + L + L S+K I + I+K + RDVY++G
Sbjct: 119 LPRSLRRPKLTDWIRQQANIAGLRPIDTVLVSAKKNHQIDHLLDVIEKYRHNRDVYVVGV 178
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS IN ++K+ K S PGTTL I+I G L DTPG
Sbjct: 179 TNVGKSTLINQIIKQ--------RTGVKELITTSRFPGTTLDKIEI-PLDDGHVLVDTPG 229
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ + A V+ +DL +APQ ++ +++ + +G T+F GG+ R
Sbjct: 230 IIHQEQMAHVLSPKDLKIVAPQKEIKPKTYQLN--------------DGQTLFLGGVARF 275
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D L + Y +L ++ + AD FY K LG LTPP +K E + L+R
Sbjct: 276 DYLHG-ERAGMVAYFDNNLPIHRTKLNNADNFYAKHLGDLLTPPTSDEKNE-FPPLER-- 331
Query: 461 LLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVEVF 520
+F TE+ SD+ GLGWI+V P + ++ A VPK V
Sbjct: 332 ---YEFHITEK--SDIVFEGLGWITV-PAKTTV----------------AAWVPKGVGAL 369
Query: 521 VRNPM 525
VR M
Sbjct: 370 VRRAM 374
>gi|225857361|ref|YP_002738872.1| GTP-binding protein YqeH [Streptococcus pneumoniae P1031]
gi|444409512|ref|ZP_21206102.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae PNI0076]
gi|444412894|ref|ZP_21209213.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae PNI0153]
gi|444421884|ref|ZP_21217552.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae PNI0446]
gi|225725831|gb|ACO21683.1| GTP-binding protein [Streptococcus pneumoniae P1031]
gi|444274133|gb|ELU79788.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae PNI0153]
gi|444279361|gb|ELU84762.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae PNI0076]
gi|444288836|gb|ELU93725.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae PNI0446]
Length = 368
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 119/392 (30%), Positives = 193/392 (49%), Gaps = 48/392 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT++ G+ E K + V C RC L H + IT V
Sbjct: 6 CIGCGATIQTTDKAGLGFTPQSALE---KGLETGEVYCQRCFRLRHYNEITDVQ------ 56
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ + L + AL+V ++DI DFNGS + + N ++LV K D+
Sbjct: 57 -----LTNDDFLKLLHEVGDSDALVVNVIDIFDFNGSVIPGLPRFVSGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W+++ ++ L + V LTS+++ I V +I+ +KGRDVY++G
Sbjct: 112 LPKSVKSGKISQWLMKRAHEEGLRPVDVVLTSAQNKHAIKEVIDKIEHYRKGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G+++ S PGTTL I+I G +YDTP
Sbjct: 172 TNVGKSTLINAIIQEITGDQNVITT---------SRFPGTTLDKIEI-PLDDGSYIYDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + A++L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLTAKNLKYVSPKKEIKPKTYQLNPEQ--------------TLFLGGLGR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + F+ L+++ + A FY K LG LTPP K+K D
Sbjct: 268 FDFIAGEKQGFTAFF-DNELKLHRSKFEGASAFYDKHLGTLLTPPNSKEKE------DFP 320
Query: 460 RLLEIKFEDTERPASDVAISGLGWISVEPVRR 491
RL++ F T + +D+ ISGLGWI V + +
Sbjct: 321 RLVQHVF--TIKDKTDLVISGLGWIRVTGIAK 350
>gi|148984192|ref|ZP_01817487.1| GTP-binding protein [Streptococcus pneumoniae SP3-BS71]
gi|149006583|ref|ZP_01830282.1| GTP-binding protein [Streptococcus pneumoniae SP18-BS74]
gi|169833423|ref|YP_001695124.1| GTP-binding protein YqeH [Streptococcus pneumoniae Hungary19A-6]
gi|182684693|ref|YP_001836440.1| GTP-binding protein YqeH [Streptococcus pneumoniae CGSP14]
gi|237649161|ref|ZP_04523413.1| GTP-binding protein YqeH [Streptococcus pneumoniae CCRI 1974]
gi|237820723|ref|ZP_04596568.1| GTP-binding protein YqeH [Streptococcus pneumoniae CCRI 1974M2]
gi|387757963|ref|YP_006064942.1| GTP-binding protein [Streptococcus pneumoniae OXC141]
gi|417677481|ref|ZP_12326888.1| GTPase family protein [Streptococcus pneumoniae GA17545]
gi|418113094|ref|ZP_12750094.1| hypothetical protein SPAR72_1797 [Streptococcus pneumoniae GA41538]
gi|418144919|ref|ZP_12781713.1| GTPase family protein [Streptococcus pneumoniae GA13494]
gi|418155739|ref|ZP_12792466.1| GTPase family protein [Streptococcus pneumoniae GA16242]
gi|418226137|ref|ZP_12852765.1| hypothetical protein SPAR141_1670 [Streptococcus pneumoniae NP112]
gi|418232747|ref|ZP_12859333.1| hypothetical protein SPAR13_1657 [Streptococcus pneumoniae GA07228]
gi|418237202|ref|ZP_12863768.1| hypothetical protein SPAR59_1756 [Streptococcus pneumoniae GA19690]
gi|419458338|ref|ZP_13998280.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA02254]
gi|419467366|ref|ZP_14007247.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA05248]
gi|419495933|ref|ZP_14035650.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA47461]
gi|419513145|ref|ZP_14052777.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA05578]
gi|419517352|ref|ZP_14056968.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA02506]
gi|421234637|ref|ZP_15691255.1| putative GTP-binding protein [Streptococcus pneumoniae 2061617]
gi|421249979|ref|ZP_15706436.1| GTP-binding protein [Streptococcus pneumoniae 2082239]
gi|421283892|ref|ZP_15734678.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA04216]
gi|421299211|ref|ZP_15749898.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA60080]
gi|421302784|ref|ZP_15753448.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA17484]
gi|147761881|gb|EDK68844.1| GTP-binding protein [Streptococcus pneumoniae SP18-BS74]
gi|147923481|gb|EDK74594.1| GTP-binding protein [Streptococcus pneumoniae SP3-BS71]
gi|168995925|gb|ACA36537.1| GTP-binding protein [Streptococcus pneumoniae Hungary19A-6]
gi|182630027|gb|ACB90975.1| GTP-binding protein [Streptococcus pneumoniae CGSP14]
gi|301800552|emb|CBW33192.1| GTP-binding protein [Streptococcus pneumoniae OXC141]
gi|332072922|gb|EGI83403.1| GTPase family protein [Streptococcus pneumoniae GA17545]
gi|353783456|gb|EHD63885.1| hypothetical protein SPAR72_1797 [Streptococcus pneumoniae GA41538]
gi|353805212|gb|EHD85487.1| GTPase family protein [Streptococcus pneumoniae GA13494]
gi|353819988|gb|EHE00177.1| GTPase family protein [Streptococcus pneumoniae GA16242]
gi|353881334|gb|EHE61148.1| hypothetical protein SPAR141_1670 [Streptococcus pneumoniae NP112]
gi|353886060|gb|EHE65844.1| hypothetical protein SPAR13_1657 [Streptococcus pneumoniae GA07228]
gi|353891640|gb|EHE71394.1| hypothetical protein SPAR59_1756 [Streptococcus pneumoniae GA19690]
gi|379530002|gb|EHY95243.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA02254]
gi|379543113|gb|EHZ08265.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA05248]
gi|379594019|gb|EHZ58830.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA47461]
gi|379634310|gb|EHZ98875.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA05578]
gi|379639425|gb|EIA03969.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA02506]
gi|395600491|gb|EJG60648.1| putative GTP-binding protein [Streptococcus pneumoniae 2061617]
gi|395613673|gb|EJG73701.1| GTP-binding protein [Streptococcus pneumoniae 2082239]
gi|395880578|gb|EJG91630.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA04216]
gi|395900682|gb|EJH11620.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA60080]
gi|395901406|gb|EJH12342.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA17484]
gi|429319928|emb|CCP33247.1| GTP-binding protein [Streptococcus pneumoniae SPN034183]
gi|429321745|emb|CCP35221.1| GTP-binding protein [Streptococcus pneumoniae SPN994039]
gi|429323565|emb|CCP31262.1| GTP-binding protein [Streptococcus pneumoniae SPN994038]
Length = 368
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 119/387 (30%), Positives = 191/387 (49%), Gaps = 48/387 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT++ G+ E K + V C RC L H + IT V
Sbjct: 6 CIGCGATIQTTDKAGLGFTPQSALE---KGLETGEVYCQRCFRLRHYNEITDVQ------ 56
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ + L + AL+V ++DI DFNGS + + N ++LV K D+
Sbjct: 57 -----LTNDDFLKLLHEVGDSDALVVNVIDIFDFNGSVIPGLPRFVSGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W+++ ++ L + V LTS+++ I V +I+ +KGRDVY++G
Sbjct: 112 LPKSVKSGKISQWLMKRAHEEGLRPVDVVLTSAQNKHAIKEVIDKIEHYRKGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G+++ S PGTTL I+I G +YDTP
Sbjct: 172 TNVGKSTLINAIIQEITGDQNVITT---------SRFPGTTLDKIEI-PLDDGSYIYDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + A++L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLTAKNLKYVSPKKEIKPKTYQLNPEQ--------------TLFLGGLGR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + F+ L+++ + A FY K LG LTPP K+K D
Sbjct: 268 FDFIAGEKQGFTAFF-DNELKLHRSKLEGASAFYDKHLGTLLTPPNSKEKE------DFP 320
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
RL++ F T + +D+ ISGLGWI V
Sbjct: 321 RLVQHVF--TIKDKTDLVISGLGWIRV 345
>gi|15901581|ref|NP_346185.1| GTP-binding protein YqeH [Streptococcus pneumoniae TIGR4]
gi|111657472|ref|ZP_01408219.1| hypothetical protein SpneT_02001323 [Streptococcus pneumoniae
TIGR4]
gi|149011381|ref|ZP_01832628.1| GTP-binding protein [Streptococcus pneumoniae SP19-BS75]
gi|149020832|ref|ZP_01835361.1| GTP-binding protein [Streptococcus pneumoniae SP23-BS72]
gi|168483288|ref|ZP_02708240.1| GTP-binding protein [Streptococcus pneumoniae CDC1873-00]
gi|168488531|ref|ZP_02712730.1| GTP-binding protein [Streptococcus pneumoniae SP195]
gi|168491368|ref|ZP_02715511.1| GTP-binding protein [Streptococcus pneumoniae CDC0288-04]
gi|194396922|ref|YP_002038359.1| GTP-binding protein YqeH [Streptococcus pneumoniae G54]
gi|303254361|ref|ZP_07340469.1| GTP-binding protein YqeH [Streptococcus pneumoniae BS455]
gi|303258686|ref|ZP_07344666.1| GTP-binding protein [Streptococcus pneumoniae SP-BS293]
gi|303261849|ref|ZP_07347795.1| GTP-binding protein [Streptococcus pneumoniae SP14-BS292]
gi|303263712|ref|ZP_07349634.1| GTP-binding protein [Streptococcus pneumoniae BS397]
gi|303266652|ref|ZP_07352536.1| GTP-binding protein [Streptococcus pneumoniae BS457]
gi|303268542|ref|ZP_07354335.1| GTP-binding protein [Streptococcus pneumoniae BS458]
gi|307127963|ref|YP_003879994.1| GTP-binding protein [Streptococcus pneumoniae 670-6B]
gi|387759860|ref|YP_006066838.1| GTP-binding protein [Streptococcus pneumoniae INV200]
gi|410477116|ref|YP_006743875.1| GTP-binding protein [Streptococcus pneumoniae gamPNI0373]
gi|417679716|ref|ZP_12329112.1| GTPase family protein [Streptococcus pneumoniae GA17570]
gi|417687199|ref|ZP_12336473.1| GTPase family protein [Streptococcus pneumoniae GA41301]
gi|418087420|ref|ZP_12724589.1| hypothetical protein SPAR87_1205 [Streptococcus pneumoniae GA47033]
gi|418103440|ref|ZP_12740512.1| hypothetical protein SPAR143_1719 [Streptococcus pneumoniae NP070]
gi|418121805|ref|ZP_12758748.1| hypothetical protein SPAR80_1676 [Streptococcus pneumoniae GA44194]
gi|418130897|ref|ZP_12767780.1| hypothetical protein SPAR14_1696 [Streptococcus pneumoniae GA07643]
gi|418133209|ref|ZP_12770079.1| hypothetical protein SPAR22_1792 [Streptococcus pneumoniae GA11304]
gi|418140074|ref|ZP_12776899.1| hypothetical protein SPAR28_1713 [Streptococcus pneumoniae GA13338]
gi|418162793|ref|ZP_12799474.1| GTPase family protein [Streptococcus pneumoniae GA17328]
gi|418176539|ref|ZP_12813130.1| GTPase family protein [Streptococcus pneumoniae GA41437]
gi|418181104|ref|ZP_12817673.1| GTPase family protein [Streptococcus pneumoniae GA41688]
gi|418187727|ref|ZP_12824250.1| hypothetical protein SPAR92_1701 [Streptococcus pneumoniae GA47360]
gi|418189987|ref|ZP_12826499.1| hypothetical protein SPAR94_1751 [Streptococcus pneumoniae GA47373]
gi|418192189|ref|ZP_12828691.1| hypothetical protein SPAR96_1722 [Streptococcus pneumoniae GA47388]
gi|418194316|ref|ZP_12830805.1| hypothetical protein SPAR119_1602 [Streptococcus pneumoniae
GA47439]
gi|418202958|ref|ZP_12839387.1| GTPase family protein [Streptococcus pneumoniae GA52306]
gi|418214947|ref|ZP_12841681.1| hypothetical protein SPAR118_1750 [Streptococcus pneumoniae
GA54644]
gi|418219476|ref|ZP_12846141.1| hypothetical protein SPAR145_1764 [Streptococcus pneumoniae NP127]
gi|418230522|ref|ZP_12857121.1| hypothetical protein SPAR136_1771 [Streptococcus pneumoniae
EU-NP01]
gi|418234949|ref|ZP_12861525.1| hypothetical protein SPAR17_1732 [Streptococcus pneumoniae GA08780]
gi|418239274|ref|ZP_12865825.1| hypothetical protein SPAR146_1731 [Streptococcus pneumoniae
NorthCarolina6A-23]
gi|419456099|ref|ZP_13996056.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae EU-NP04]
gi|419462910|ref|ZP_14002813.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA02714]
gi|419476080|ref|ZP_14015916.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA14688]
gi|419478389|ref|ZP_14018212.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA18068]
gi|419482786|ref|ZP_14022573.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA40563]
gi|419484978|ref|ZP_14024753.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA43257]
gi|419487226|ref|ZP_14026988.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA44128]
gi|419491647|ref|ZP_14031385.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA47179]
gi|419508845|ref|ZP_14048496.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA49542]
gi|419515255|ref|ZP_14054880.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae
England14-9]
gi|419521681|ref|ZP_14061276.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA05245]
gi|419526463|ref|ZP_14066021.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA14373]
gi|419532946|ref|ZP_14072461.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA47794]
gi|421209516|ref|ZP_15666529.1| hypothetical protein AMCSP11_001704 [Streptococcus pneumoniae
2070005]
gi|421225586|ref|ZP_15682324.1| hypothetical protein AMCSP06_001724 [Streptococcus pneumoniae
2070768]
gi|421227944|ref|ZP_15684646.1| hypothetical protein AMCSP08_001763 [Streptococcus pneumoniae
2072047]
gi|421236837|ref|ZP_15693434.1| GTP-binding protein [Streptococcus pneumoniae 2071004]
gi|421241211|ref|ZP_15697756.1| GTP-binding protein [Streptococcus pneumoniae 2080913]
gi|421243681|ref|ZP_15700193.1| GTP-binding protein [Streptococcus pneumoniae 2081074]
gi|421248020|ref|ZP_15704498.1| GTP-binding protein [Streptococcus pneumoniae 2082170]
gi|421271160|ref|ZP_15722014.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae SPAR48]
gi|421275460|ref|ZP_15726289.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA52612]
gi|421279526|ref|ZP_15730332.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA17301]
gi|421285894|ref|ZP_15736670.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA60190]
gi|421294883|ref|ZP_15745604.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA56113]
gi|421296582|ref|ZP_15747291.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA58581]
gi|421301603|ref|ZP_15752273.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA19998]
gi|444387594|ref|ZP_21185613.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae
PCS125219]
gi|444389152|ref|ZP_21187069.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae PCS70012]
gi|444392013|ref|ZP_21189773.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae PCS81218]
gi|444394829|ref|ZP_21192379.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae PNI0002]
gi|444398200|ref|ZP_21195683.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae PNI0006]
gi|444399303|ref|ZP_21196771.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae PNI0007]
gi|444402501|ref|ZP_21199664.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae PNI0008]
gi|444405544|ref|ZP_21202419.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae PNI0009]
gi|444407818|ref|ZP_21204485.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae PNI0010]
gi|444415694|ref|ZP_21211923.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae PNI0199]
gi|444417246|ref|ZP_21213299.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae PNI0360]
gi|444419622|ref|ZP_21215470.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae PNI0427]
gi|14973245|gb|AAK75825.1| GTP-binding protein [Streptococcus pneumoniae TIGR4]
gi|147764371|gb|EDK71302.1| GTP-binding protein [Streptococcus pneumoniae SP19-BS75]
gi|147930473|gb|EDK81456.1| GTP-binding protein [Streptococcus pneumoniae SP23-BS72]
gi|172043326|gb|EDT51372.1| GTP-binding protein [Streptococcus pneumoniae CDC1873-00]
gi|183572678|gb|EDT93206.1| GTP-binding protein [Streptococcus pneumoniae SP195]
gi|183574264|gb|EDT94792.1| GTP-binding protein [Streptococcus pneumoniae CDC0288-04]
gi|194356589|gb|ACF55037.1| GTP-binding protein [Streptococcus pneumoniae G54]
gi|301802449|emb|CBW35205.1| GTP-binding protein [Streptococcus pneumoniae INV200]
gi|302598712|gb|EFL65750.1| GTP-binding protein YqeH [Streptococcus pneumoniae BS455]
gi|302636932|gb|EFL67421.1| GTP-binding protein [Streptococcus pneumoniae SP14-BS292]
gi|302640187|gb|EFL70642.1| GTP-binding protein [Streptococcus pneumoniae SP-BS293]
gi|302641937|gb|EFL72291.1| GTP-binding protein [Streptococcus pneumoniae BS458]
gi|302643814|gb|EFL74077.1| GTP-binding protein [Streptococcus pneumoniae BS457]
gi|302646750|gb|EFL76975.1| GTP-binding protein [Streptococcus pneumoniae BS397]
gi|306485025|gb|ADM91894.1| GTP-binding protein [Streptococcus pneumoniae 670-6B]
gi|332072581|gb|EGI83064.1| GTPase family protein [Streptococcus pneumoniae GA17570]
gi|332074089|gb|EGI84567.1| GTPase family protein [Streptococcus pneumoniae GA41301]
gi|353758436|gb|EHD39028.1| hypothetical protein SPAR87_1205 [Streptococcus pneumoniae GA47033]
gi|353774741|gb|EHD55228.1| hypothetical protein SPAR143_1719 [Streptococcus pneumoniae NP070]
gi|353792641|gb|EHD73013.1| hypothetical protein SPAR80_1676 [Streptococcus pneumoniae GA44194]
gi|353802221|gb|EHD82521.1| hypothetical protein SPAR14_1696 [Streptococcus pneumoniae GA07643]
gi|353804651|gb|EHD84931.1| hypothetical protein SPAR22_1792 [Streptococcus pneumoniae GA11304]
gi|353826855|gb|EHE07012.1| GTPase family protein [Streptococcus pneumoniae GA17328]
gi|353840610|gb|EHE20674.1| GTPase family protein [Streptococcus pneumoniae GA41437]
gi|353843176|gb|EHE23221.1| GTPase family protein [Streptococcus pneumoniae GA41688]
gi|353849712|gb|EHE29717.1| hypothetical protein SPAR92_1701 [Streptococcus pneumoniae GA47360]
gi|353853714|gb|EHE33695.1| hypothetical protein SPAR94_1751 [Streptococcus pneumoniae GA47373]
gi|353855275|gb|EHE35245.1| hypothetical protein SPAR96_1722 [Streptococcus pneumoniae GA47388]
gi|353857894|gb|EHE37856.1| hypothetical protein SPAR119_1602 [Streptococcus pneumoniae
GA47439]
gi|353867515|gb|EHE47410.1| GTPase family protein [Streptococcus pneumoniae GA52306]
gi|353869677|gb|EHE49558.1| hypothetical protein SPAR118_1750 [Streptococcus pneumoniae
GA54644]
gi|353873836|gb|EHE53695.1| hypothetical protein SPAR145_1764 [Streptococcus pneumoniae NP127]
gi|353885403|gb|EHE65192.1| hypothetical protein SPAR136_1771 [Streptococcus pneumoniae
EU-NP01]
gi|353886571|gb|EHE66353.1| hypothetical protein SPAR17_1732 [Streptococcus pneumoniae GA08780]
gi|353892265|gb|EHE72014.1| hypothetical protein SPAR146_1731 [Streptococcus pneumoniae
NorthCarolina6A-23]
gi|353904853|gb|EHE80303.1| hypothetical protein SPAR28_1713 [Streptococcus pneumoniae GA13338]
gi|379530342|gb|EHY95582.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA02714]
gi|379538981|gb|EHZ04161.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA05245]
gi|379557103|gb|EHZ22150.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA14373]
gi|379558862|gb|EHZ23894.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA14688]
gi|379564901|gb|EHZ29896.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA18068]
gi|379579378|gb|EHZ44285.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA40563]
gi|379581731|gb|EHZ46615.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA43257]
gi|379585595|gb|EHZ50451.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA44128]
gi|379593009|gb|EHZ57824.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA47179]
gi|379605466|gb|EHZ70217.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA47794]
gi|379610799|gb|EHZ75529.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA49542]
gi|379628075|gb|EHZ92681.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae EU-NP04]
gi|379635804|gb|EIA00363.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae
England14-9]
gi|395573612|gb|EJG34202.1| hypothetical protein AMCSP11_001704 [Streptococcus pneumoniae
2070005]
gi|395589073|gb|EJG49395.1| hypothetical protein AMCSP06_001724 [Streptococcus pneumoniae
2070768]
gi|395594228|gb|EJG54468.1| hypothetical protein AMCSP08_001763 [Streptococcus pneumoniae
2072047]
gi|395601600|gb|EJG61747.1| GTP-binding protein [Streptococcus pneumoniae 2071004]
gi|395606330|gb|EJG66437.1| GTP-binding protein [Streptococcus pneumoniae 2081074]
gi|395607589|gb|EJG67686.1| GTP-binding protein [Streptococcus pneumoniae 2080913]
gi|395612894|gb|EJG72928.1| GTP-binding protein [Streptococcus pneumoniae 2082170]
gi|395867374|gb|EJG78498.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae SPAR48]
gi|395873424|gb|EJG84516.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA52612]
gi|395879019|gb|EJG90081.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA17301]
gi|395885881|gb|EJG96902.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA60190]
gi|395893452|gb|EJH04439.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA56113]
gi|395895455|gb|EJH06430.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA58581]
gi|395899163|gb|EJH10107.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA19998]
gi|406370061|gb|AFS43751.1| GTP-binding protein [Streptococcus pneumoniae gamPNI0373]
gi|444252472|gb|ELU58935.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae
PCS125219]
gi|444257752|gb|ELU64085.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae PCS70012]
gi|444259447|gb|ELU65761.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae PNI0002]
gi|444260857|gb|ELU67165.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae PNI0006]
gi|444264172|gb|ELU70277.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae PCS81218]
gi|444266357|gb|ELU72314.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae PNI0008]
gi|444268869|gb|ELU74693.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae PNI0007]
gi|444271414|gb|ELU77165.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae PNI0010]
gi|444273115|gb|ELU78796.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae PNI0009]
gi|444279221|gb|ELU84627.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae PNI0199]
gi|444284412|gb|ELU89560.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae PNI0360]
gi|444286444|gb|ELU91426.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae PNI0427]
Length = 368
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 119/392 (30%), Positives = 193/392 (49%), Gaps = 48/392 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT++ G+ E K + V C RC L H + IT V
Sbjct: 6 CIGCGATIQTTDKAGLGFTPQSALE---KGLETGEVYCQRCFRLRHYNEITDVQ------ 56
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ + L + AL+V ++DI DFNGS + + N ++LV K D+
Sbjct: 57 -----LTNDDFLKLLHEVGDSDALVVNVIDIFDFNGSVIPGLPRFVSGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W+++ ++ L + V LTS+++ I V +I+ +KGRDVY++G
Sbjct: 112 LPKSVKSGKISQWLMKRAHEEGLRPVDVVLTSAQNKHAIKEVIDKIEHYRKGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G+++ S PGTTL I+I G +YDTP
Sbjct: 172 TNVGKSTLINAIIQEITGDQNVITT---------SRFPGTTLDKIEI-PLDDGSYIYDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + A++L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLTAKNLKYVSPKKEIKPKTYQLNPEQ--------------TLFLGGLGR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + F+ L+++ + A FY K LG LTPP K+K D
Sbjct: 268 FDFIAGEKQGFTAFF-DNELKLHRSKLEGASAFYDKHLGTLLTPPNSKEKE------DFP 320
Query: 460 RLLEIKFEDTERPASDVAISGLGWISVEPVRR 491
RL++ F T + +D+ ISGLGWI V + +
Sbjct: 321 RLVQHVF--TIKDKTDLVISGLGWIRVTGIAK 350
>gi|405760389|ref|YP_006700985.1| GTP-binding protein [Streptococcus pneumoniae SPNA45]
gi|404277278|emb|CCM07787.1| GTP-binding protein [Streptococcus pneumoniae SPNA45]
Length = 368
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 122/388 (31%), Positives = 192/388 (49%), Gaps = 50/388 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT++ G+ E K + V C RC L H + IT V
Sbjct: 6 CIGCGATIQTTDKAGLGFTPQSALE---KGLETGEVYCQRCFRLRHYNEITDVQ------ 56
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ + L + AL+V ++DI DFNGS + + N ++LV K D+
Sbjct: 57 -----LTNDDFLKLLHEVGDSDALVVNVIDIFDFNGSVIPGLPRFVSGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W+++ ++ L + V LTS+++ I V +I+ +KGRDVY++G
Sbjct: 112 LPKSVKSGKISQWLMKRAHEEGLRPVDVVLTSAQNKHAIKEVIDKIEHYRKGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G+++ S PGTTL I+I G +YDTP
Sbjct: 172 TNVGKSTLINAIIQEITGDQNVITT---------SRFPGTTLDKIEI-PLDDGSYIYDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLN-GFTIFWGGLV 398
G+ H+ A + A++L ++P+ ++ K++ LN G T+F GGL
Sbjct: 222 GIIHRHQMAHYLTAKNLKYVSPKKEIKP---------------KTYQLNPGQTLFLGGLG 266
Query: 399 RIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDR 458
R D + + F+ L+++ + A FY K LG LTPP K+K D
Sbjct: 267 RFDFIAGEKQGFTAFF-DNELKLHRSKLEGASAFYDKHLGTLLTPPNSKEKE------DF 319
Query: 459 ERLLEIKFEDTERPASDVAISGLGWISV 486
RL++ F T + +D+ ISGLGWI V
Sbjct: 320 PRLVQHVF--TIKDKTDLVISGLGWIRV 345
>gi|221232484|ref|YP_002511637.1| GTP-binding protein [Streptococcus pneumoniae ATCC 700669]
gi|415700216|ref|ZP_11457930.1| hypothetical protein CGSSp4595_1737 [Streptococcus pneumoniae
459-5]
gi|415750139|ref|ZP_11478083.1| hypothetical protein CGSSpSV35_1840 [Streptococcus pneumoniae SV35]
gi|415752954|ref|ZP_11479936.1| hypothetical protein CGSSpSV36_1553 [Streptococcus pneumoniae SV36]
gi|418079179|ref|ZP_12716401.1| hypothetical protein SPAR123_1626 [Streptococcus pneumoniae
4027-06]
gi|418081377|ref|ZP_12718587.1| hypothetical protein SPAR121_1674 [Streptococcus pneumoniae
6735-05]
gi|418124079|ref|ZP_12761010.1| hypothetical protein SPAR82_1748 [Streptococcus pneumoniae GA44378]
gi|418128623|ref|ZP_12765516.1| hypothetical protein SPAR144_1703 [Streptococcus pneumoniae NP170]
gi|418137820|ref|ZP_12774658.1| GTPase family protein [Streptococcus pneumoniae GA11663]
gi|418178799|ref|ZP_12815382.1| GTPase family protein [Streptococcus pneumoniae GA41565]
gi|419473808|ref|ZP_14013657.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA13430]
gi|220674945|emb|CAR69522.1| GTP-binding protein [Streptococcus pneumoniae ATCC 700669]
gi|353746706|gb|EHD27366.1| hypothetical protein SPAR123_1626 [Streptococcus pneumoniae
4027-06]
gi|353752116|gb|EHD32747.1| hypothetical protein SPAR121_1674 [Streptococcus pneumoniae
6735-05]
gi|353795899|gb|EHD76245.1| hypothetical protein SPAR82_1748 [Streptococcus pneumoniae GA44378]
gi|353799122|gb|EHD79445.1| hypothetical protein SPAR144_1703 [Streptococcus pneumoniae NP170]
gi|353842858|gb|EHE22904.1| GTPase family protein [Streptococcus pneumoniae GA41565]
gi|353900775|gb|EHE76326.1| GTPase family protein [Streptococcus pneumoniae GA11663]
gi|379550972|gb|EHZ16068.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA13430]
gi|381308601|gb|EIC49444.1| hypothetical protein CGSSpSV36_1553 [Streptococcus pneumoniae SV36]
gi|381314912|gb|EIC55678.1| hypothetical protein CGSSp4595_1737 [Streptococcus pneumoniae
459-5]
gi|381318433|gb|EIC59158.1| hypothetical protein CGSSpSV35_1840 [Streptococcus pneumoniae SV35]
Length = 368
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 119/387 (30%), Positives = 191/387 (49%), Gaps = 48/387 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT++ G+ E K + V C RC L H + IT V
Sbjct: 6 CIGCGATIQTTDKAGLGFTPQSALE---KGLETGEVYCQRCFRLRHYNEITDVQ------ 56
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ + L + AL+V ++DI DFNGS + + N ++LV K D+
Sbjct: 57 -----LTDDDFLKLLHEVGDSDALVVNVIDIFDFNGSVIPGLPRFVSGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W+++ ++ L + V LTS+++ I V +I+ +KGRDVY++G
Sbjct: 112 LPKSVKSGKISQWLMKRAREEGLRPVDVVLTSAQNKHAIKEVIDKIEHYRKGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G+++ S PGTTL I+I G +YDTP
Sbjct: 172 TNVGKSTLINAIIQEITGDQNVITT---------SRFPGTTLDKIEI-PLDDGSYIYDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + A++L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLTAKNLKYVSPKKEIKPKTYQLNPEQ--------------TLFLGGLGR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + F+ L+++ + A FY K LG LTPP K+K D
Sbjct: 268 FDFIAGEKQGFTAFF-DNELKLHRSKLEGASAFYDKHLGTLLTPPNSKEKE------DFP 320
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
RL++ F T + +D+ ISGLGWI V
Sbjct: 321 RLVQHVF--TIKDKTDLVISGLGWIRV 345
>gi|171780310|ref|ZP_02921214.1| hypothetical protein STRINF_02098 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
gi|379705906|ref|YP_005204365.1| GTP-binding protein [Streptococcus infantarius subsp. infantarius
CJ18]
gi|171281658|gb|EDT47093.1| ribosome biogenesis GTPase YqeH [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
gi|374682605|gb|AEZ62894.1| GTP-binding protein [Streptococcus infantarius subsp. infantarius
CJ18]
Length = 372
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 121/388 (31%), Positives = 187/388 (48%), Gaps = 48/388 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT + + GY E K + + C RC L H + IT V
Sbjct: 6 CIGCGAKIQTEDKEQAGYTPKAALE---KGLETGELYCQRCFRLRHYNEITDV------- 55
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ DE + L + AL+V +VDI DFNGS + + N ++LV K D+
Sbjct: 56 ----HITDDEFLKLLHEVGDSDALVVNVVDIFDFNGSVIPGLSRFVSGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK V W+ E ++ L + V LTS+++ I + +I+K +KGRDVY++G
Sbjct: 112 LPKSVKTGKVTQWLTERAHEEGLRPVDVILTSAQNHQAIKDLIEKIEKLRKGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA++K++ GE+D S PGTTL I+I G ++DTP
Sbjct: 172 TNVGKSTLINAIIKEITGEKDIITT---------SRFPGTTLDKIEI-PLDDGSYIFDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + ++L ++P+ ++ +++ + E T+F GL R
Sbjct: 222 GIIHRHQMAHYLGDKNLKYISPKKEIKPKTYQLNPEQ--------------TLFLAGLGR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + T Y +L+++ AD FY K +G L PP K+ AE K + E
Sbjct: 268 FDFISG-DKQGFTAYFDNNLKLHRTKLAGADAFYDKHVGSLLIPPSDKELAEFPKLVCHE 326
Query: 460 RLLEIKFEDTERPASDVAISGLGWISVE 487
++ K DV SGLGWI ++
Sbjct: 327 FTIKDKM--------DVVYSGLGWIRIK 346
>gi|307708267|ref|ZP_07644734.1| GTP-binding protein [Streptococcus mitis NCTC 12261]
gi|307615713|gb|EFN94919.1| GTP-binding protein [Streptococcus mitis NCTC 12261]
Length = 368
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 118/387 (30%), Positives = 191/387 (49%), Gaps = 48/387 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT++ G+ E K + V C RC L H + IT V
Sbjct: 6 CIGCGATIQTTDKAGLGFTPQSALE---KGLETGEVYCQRCFRLRHYNEITDVQ------ 56
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ + L + AL+V ++DI DFNGS + + N ++LV K D+
Sbjct: 57 -----LTDDDFLKLLHEVGDSDALVVNVIDIFDFNGSVIPGLPRFVSGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W++E ++ L + V LTS+++ I V +I+ +KGRDVY++G
Sbjct: 112 LPKSVKPGKISQWLMERAHEEGLRPVDVVLTSAQNKHAIKEVIDKIEHYRKGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G+++ S PGTTL I+I G +YDTP
Sbjct: 172 TNVGKSTLINAIIQEITGDQNVITT---------SRFPGTTLDKIEI-PLDDGSYIYDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + A++L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLTAKNLKYVSPKKEIKPKTYQLNPEQ--------------TLFLGGLGR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + F+ L+++ + A FY K +G LTPP K+K D
Sbjct: 268 FDFISGEKQGFTAFF-DNELKLHRTKLEGASAFYDKHVGTLLTPPNSKEKE------DFP 320
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
+L++ F E+ +D+ ISGLGWI V
Sbjct: 321 KLVQHVFNIKEK--TDLVISGLGWIRV 345
>gi|419493875|ref|ZP_14033600.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA47210]
gi|421290311|ref|ZP_15741061.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA54354]
gi|421305703|ref|ZP_15756357.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA62331]
gi|379592448|gb|EHZ57264.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA47210]
gi|395887996|gb|EJG99010.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA54354]
gi|395904661|gb|EJH15575.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA62331]
Length = 368
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 119/392 (30%), Positives = 193/392 (49%), Gaps = 48/392 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT++ G+ E K + V C RC L H + IT V
Sbjct: 6 CIGCGATIQTTDKAGLGFTPQSALE---KGLETGEVYCQRCFRLRHYNEITDVQ------ 56
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ + L + AL+V ++DI DFNGS + + N ++LV K D+
Sbjct: 57 -----LTNDDFLKLLHEVGDSDALVVNVIDIFDFNGSVIPGLPRFVSGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W+++ ++ L + V LTS+++ I V +I+ +KGRDVY++G
Sbjct: 112 LPKSVKSGKISQWLMKRAHEEGLRPVDVVLTSAQNKHAIKEVIDKIEHYRKGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G+++ S PGTTL I+I G +YDTP
Sbjct: 172 TNVGKSTLINAIIQEITGDQNVITT---------SRFPGTTLDKIEI-PLDDGSYIYDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + A++L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLTAKNLKYVSPKKEIKPKTYQLNPEQ--------------TLFLGGLGR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + F+ L+++ + A FY K LG LTPP K+K D
Sbjct: 268 FDFIAGEKQGFTAFF-DNELKLHRSKLEGASAFYDKHLGTLLTPPNSKEKE------DFP 320
Query: 460 RLLEIKFEDTERPASDVAISGLGWISVEPVRR 491
RL++ F T + +D+ ISGLGWI V + +
Sbjct: 321 RLVQHVF--TIKNKTDLVISGLGWIRVTGIAK 350
>gi|423634841|ref|ZP_17610494.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VD156]
gi|401278827|gb|EJR84757.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VD156]
Length = 368
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 125/428 (29%), Positives = 190/428 (44%), Gaps = 70/428 (16%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG +QT + GY + E ++ V+C RC L H + I V
Sbjct: 7 CIGCGVEIQTENKNEVGYAPASSLEKEQ-------VICQRCFRLKHYNEIQDVS------ 53
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ L+ + + AL+VK+VDI DFNGS+L + G N ++LV K DL
Sbjct: 54 -----LTDDDFLRILNGIGKSDALVVKIVDIFDFNGSWLPGLHRFVGNNKVLLVGNKADL 108
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
+PK + V W+ + + L V L S+ GI +A I+ + G+DVY++G
Sbjct: 109 IPKSVKHDKVKHWMRYSAKQLGLKPEDVFLISAAKGQGIAELAEAIEYYRGGKDVYVVGC 168
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS FIN ++K+ + + PGTTL I I LYDTPG
Sbjct: 169 TNVGKSTFINRMIKEFSDETENVITTSHF-------PGTTLDLIDI-PLDEESSLYDTPG 220
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ HH+ A V + L + P ++ F + E T+F+ GL R
Sbjct: 221 IINHHQMAHYVGKQSLKLITPTKEIKPMVFQLNEEQ--------------TLFFSGLARF 266
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D + T + L ++ +KADE Y+ G L+PP ++ E
Sbjct: 267 DYVSG-GRRAFTCHFSNRLTIHRTKLEKADELYKNHAGDLLSPPTPEE---------LEN 316
Query: 461 LLE-IKFE-DTERPASDVAISGLGWISV-EPVRRSIRNSDINLESTSGELHLAVHVPKPV 517
+ E +K+E + P +DV SGLGW++V EP + + HVPK V
Sbjct: 317 MPELVKYEFNIREPKTDVVFSGLGWVTVNEPGAK-----------------IVAHVPKGV 359
Query: 518 EVFVRNPM 525
V +R +
Sbjct: 360 SVSLRKSL 367
>gi|418167351|ref|ZP_12804005.1| GTPase family protein [Streptococcus pneumoniae GA17971]
gi|353828517|gb|EHE08655.1| GTPase family protein [Streptococcus pneumoniae GA17971]
Length = 368
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 119/392 (30%), Positives = 193/392 (49%), Gaps = 48/392 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT++ G+ E K + V C RC L H + IT V
Sbjct: 6 CIGCGATIQTTDKAGLGFTPQSALE---KGLETGEVYCQRCFRLRHYNEITDVQ------ 56
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ + L + AL+V ++DI DFNGS + + N ++LV K D+
Sbjct: 57 -----LTDDDFLKLLHEVGDSDALVVNVIDIFDFNGSVIPGLPRFVSGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W+++ ++ L + V LTS+++ I V +I+ +KGRDVY++G
Sbjct: 112 LPKSVKSGKISQWLMKRAHEEGLRPVDVVLTSAQNKHAIKEVIDKIEHYRKGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G+++ S PGTTL I+I G +YDTP
Sbjct: 172 TNVGKSTLINAIIQEITGDQNVITT---------SRFPGTTLDKIEI-PLDDGSYIYDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + A++L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLTAKNLKYVSPKKEIKPKTYQLNPEQ--------------TLFLGGLGR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + F+ L+++ + A FY K LG LTPP K+K D
Sbjct: 268 FDFIAGEKQGFTAFF-DNELKLHRSKLEGASAFYDKHLGTLLTPPNSKEKE------DFP 320
Query: 460 RLLEIKFEDTERPASDVAISGLGWISVEPVRR 491
RL++ F T + +D+ ISGLGWI V + +
Sbjct: 321 RLVQHVF--TIKDKTDLVISGLGWIRVTGIAK 350
>gi|336234611|ref|YP_004587227.1| ribosome biogenesis GTPase YqeH [Geobacillus thermoglucosidasius
C56-YS93]
gi|423719182|ref|ZP_17693364.1| ribosome biogenesis GTPase yqeH [Geobacillus thermoglucosidans
TNO-09.020]
gi|335361466|gb|AEH47146.1| ribosome biogenesis GTPase YqeH [Geobacillus thermoglucosidasius
C56-YS93]
gi|383368085|gb|EID45360.1| ribosome biogenesis GTPase yqeH [Geobacillus thermoglucosidans
TNO-09.020]
Length = 367
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 118/389 (30%), Positives = 187/389 (48%), Gaps = 50/389 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +Q+ + PGY E ++ V+C RC L H + + V
Sbjct: 7 CIGCGAIIQSEDETKPGYAPKSVLEKEE-------VICQRCFRLKHYNEVQDVE------ 53
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ + L + + +AL+VK+VDI DFNGS+L + NPI+LV K DL
Sbjct: 54 -----LTDDDFLKILHSIGQSEALVVKIVDIFDFNGSWLPGLHRFVANNPILLVGNKADL 108
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + + W+ + L + + L S+ GI I+K + G++VY++G
Sbjct: 109 LPKSVKYPKLIHWMAQMANDLGLKPVDICLVSAVKGIGIAKAMEAIEKHRLGKNVYVVGC 168
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS FIN ++++ + S PGTTL I+I G LYDTPG
Sbjct: 169 TNVGKSTFINRIIQETTGKGNVITT--------SYFPGTTLDIIEI-PLDDGAALYDTPG 219
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ HH+ A V +DL + P+ + + + + NE + T+F+GGL R+
Sbjct: 220 IINHHQMAHFVDKKDLKIITPKREIHPKVYQL-------NEQQ-------TLFFGGLARL 265
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D +K + + ++ L ++ +KAD Y K+ G L+PP K + +
Sbjct: 266 DYIKGGRRSFVCYFA-NELPIHRTKLEKADALYAKQFGELLSPP-SKHYIDQF-----PP 318
Query: 461 LLEIKFEDTERPASDVAISGLGWISV-EP 488
L+ F ER +D+ SGLGW++ EP
Sbjct: 319 LVAHTFTIKER-KTDIVFSGLGWVTCNEP 346
>gi|419778100|ref|ZP_14304002.1| ribosome biogenesis GTPase YqeH [Streptococcus oralis SK10]
gi|383187853|gb|EIC80297.1| ribosome biogenesis GTPase YqeH [Streptococcus oralis SK10]
Length = 368
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 118/387 (30%), Positives = 192/387 (49%), Gaps = 48/387 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT++ G+ E K + V C RC L H + IT V
Sbjct: 6 CIGCGATIQTTDKAGLGFTPQSALE---KGLETGEVYCQRCFRLRHYNEITDVQ------ 56
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ + L + AL+V ++DI DFNGS + + N ++LV K D+
Sbjct: 57 -----LTDDDFLKLLHEVGDSDALVVNVIDIFDFNGSVIPGLPRFVSGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + + W++E ++ L + V LTS+++ I V +I+ +KGRDVY++G
Sbjct: 112 LPKSVKPSKISQWLMERAHEEGLRPVDVVLTSAQNKHAIKEVIDKIEHYRKGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS IN++++++ G+++ S PGTTL I+I G +YDTP
Sbjct: 172 TNVGKSTLINSIIQEITGDQNVITT---------SRFPGTTLDKIEI-PLDDGSYIYDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + A++L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLTAKNLKYVSPKKEIKPKTYQLNPEQ--------------TLFLGGLGR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + F+ L+++ + A FY K LG LTPP K+K D
Sbjct: 268 FDFISGEKQGFTAFFD-NELKLHRTKLEGASAFYDKHLGTLLTPPNSKEKE------DFP 320
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
+L++ F T + +D+ ISGLGWI V
Sbjct: 321 KLVQHVF--TIKDKTDLVISGLGWIRV 345
>gi|419443162|ref|ZP_13983188.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA13224]
gi|379550627|gb|EHZ15724.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA13224]
Length = 368
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 119/387 (30%), Positives = 191/387 (49%), Gaps = 48/387 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT++ G+ E K + V C RC L H + IT V
Sbjct: 6 CIGCGATIQTTDKAGLGFTPQSALE---KGLETGEVYCQRCFRLRHYNEITDVQ------ 56
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ + L + AL+V ++DI DFNGS + + N ++LV K D+
Sbjct: 57 -----LTDDDFLKLLHEVGDSDALVVNVIDIFDFNGSVIPGLPRFVSGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W+++ ++ L + V LTS+++ I V +I+ +KGRDVY++G
Sbjct: 112 LPKSVKSGKISQWLMKRAHEEGLRPVDVVLTSAQNKHAIKEVIDKIEHYRKGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G+++ S PGTTL I+I G +YDTP
Sbjct: 172 TNVGKSTLINAIIQEITGDQNVITT---------SRFPGTTLDKIEI-PLDDGSYIYDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + A++L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLTAKNLKYVSPKKEIKPKTYQLNPEQ--------------TLFLGGLGR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + F+ L+++ + A FY K LG LTPP K+K D
Sbjct: 268 FDFIAGEKQGFTAFF-DNELKLHRSKLEGASAFYDKHLGTLLTPPNSKEKE------DFP 320
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
RL++ F T + +D+ ISGLGWI V
Sbjct: 321 RLVQHVF--TIKDKTDLVISGLGWIRV 345
>gi|406587446|ref|ZP_11062332.1| GTPase YqeH [Streptococcus sp. GMD1S]
gi|419814222|ref|ZP_14339020.1| GTPase YqeH [Streptococcus sp. GMD2S]
gi|419816835|ref|ZP_14341007.1| GTPase YqeH [Streptococcus sp. GMD4S]
gi|404466599|gb|EKA11917.1| GTPase YqeH [Streptococcus sp. GMD4S]
gi|404472084|gb|EKA16530.1| GTPase YqeH [Streptococcus sp. GMD2S]
gi|404473066|gb|EKA17431.1| GTPase YqeH [Streptococcus sp. GMD1S]
Length = 368
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 118/387 (30%), Positives = 192/387 (49%), Gaps = 48/387 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT++ G+ E K + V C RC L H + IT V
Sbjct: 6 CIGCGAAIQTTDKAGLGFTPQSALE---KGLETGEVYCQRCFRLRHYNEITDVQ------ 56
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ + L + AL+V ++DI DFNGS + + N ++LV K D+
Sbjct: 57 -----LTDDDFLKLLHEVGDSDALVVNVIDIFDFNGSVIPGLPRFVSGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + + W++E ++ L + V LTS+++ I V +I+ +KGRDVY++G
Sbjct: 112 LPKSVKPSKISQWLMERAHEEGLRPVDVVLTSAQNKHAIKEVIDKIEHYRKGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS IN++++++ G+++ S PGTTL I+I G +YDTP
Sbjct: 172 TNVGKSTLINSIIQEITGDQNVITT---------SRFPGTTLDKIEI-PLDDGSYIYDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + A++L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLTAKNLKYVSPKKEIKPKTYQLNPEQ--------------TLFLGGLGR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + F+ L+++ + A FY K LG LTPP K+K D
Sbjct: 268 FDFISGEKQGFTAFFD-NELKLHRTKLEGASAFYDKHLGTLLTPPNSKEKE------DFP 320
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
+L++ F T + +D+ ISGLGWI V
Sbjct: 321 KLVQHVF--TIKDKTDLVISGLGWIRV 345
>gi|421487827|ref|ZP_15935225.1| ribosome biogenesis GTPase YqeH [Streptococcus oralis SK304]
gi|400369789|gb|EJP22786.1| ribosome biogenesis GTPase YqeH [Streptococcus oralis SK304]
Length = 368
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 118/387 (30%), Positives = 192/387 (49%), Gaps = 48/387 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT++ G+ E K + V C RC L H + IT V
Sbjct: 6 CIGCGATIQTTDKAGLGFTPQSALE---KGLETGEVYCQRCFRLRHYNEITDVQ------ 56
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ + L + AL+V ++DI DFNGS + + N ++LV K D+
Sbjct: 57 -----LTDDDFLKLLHEVGDSDALVVNVIDIFDFNGSVIPGLPRFVSGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + + W++E ++ L + V LTS+++ I V +I+ +KGRDVY++G
Sbjct: 112 LPKSVKPSKISQWLMEHAHEEGLRPVDVVLTSAQNKHAIKEVIDKIEHYRKGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G+++ S PGTTL I+I G +YDTP
Sbjct: 172 TNVGKSTLINAIIQEITGDQNVITT---------SRFPGTTLDKIEI-PLDDGSYIYDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + A++L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLTAKNLKYVSPKKEIKPKTYQLNPEQ--------------TLFLGGLGR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + F+ L+++ + A FY K +G LTPP K+K D
Sbjct: 268 FDFISGEKQGFTAFFD-NELKLHRTKLEGASAFYDKHVGTLLTPPNSKEKE------DFP 320
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
+L++ F T + +D+ ISGLGWI V
Sbjct: 321 KLVQHVF--TIKDKTDLVISGLGWIRV 345
>gi|427395311|ref|ZP_18888233.1| ribosome biogenesis GTPase YqeH [Enterococcus durans FB129-CNAB-4]
gi|430862527|ref|ZP_19479844.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1573]
gi|430963077|ref|ZP_19487369.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1576]
gi|431010994|ref|ZP_19489738.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1578]
gi|431263923|ref|ZP_19505811.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1623]
gi|425723811|gb|EKU86697.1| ribosome biogenesis GTPase YqeH [Enterococcus durans FB129-CNAB-4]
gi|430549105|gb|ELA88952.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1573]
gi|430555502|gb|ELA95039.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1576]
gi|430560016|gb|ELA99322.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1578]
gi|430576359|gb|ELB15010.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1623]
Length = 369
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 121/387 (31%), Positives = 182/387 (47%), Gaps = 46/387 (11%)
Query: 100 SCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGY 159
C GCGA +QT++ GY E K V C RC L H + I V
Sbjct: 6 QCIGCGAVIQTNKPGELGYTPQTALE---KGLASGEVYCQRCFRLRHYNEIQDVS----- 57
Query: 160 AGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVD 219
++ D+ L+ L ++ ALIV +VDI DFNGS + + G NP++LV KVD
Sbjct: 58 ------LTDDDFLRLLNELGQKDALIVNVVDIFDFNGSLIPGLHRFVGDNPVLLVGNKVD 111
Query: 220 LLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILG 279
+LPK + W+ E + + + V LTS+K + + +I++ + GRDVYI+G
Sbjct: 112 ILPKSLKKTKLTQWMKERAYEAGIRPVDVLLTSAKKSHEMTELLEKIEEYRDGRDVYIVG 171
Query: 280 SANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS IN ++K +Q PGTTL I+I G L DTP
Sbjct: 172 VTNVGKSTLINQIIKNTAGVQDVITTSQ--------FPGTTLDKIEI-PLDDGHFLIDTP 222
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + +DL +AP ++ + + + NE G T+F GGL R
Sbjct: 223 GIIHRHQMAHYLGKKDLRIIAPLKEIKPKVYQL-------NE-------GQTLFLGGLAR 268
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + Y + ++ +KADEFYQK +G L PP + E + L
Sbjct: 269 FDFISG-NRASFIAYVSNDVNIHRTKLEKADEFYQKHVGGLLQPP-RPDEVEAFPEL--- 323
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
++F+ + + +D+ +GLGWI+V
Sbjct: 324 ----VRFDFSVKEKTDIVFAGLGWITV 346
>gi|417936728|ref|ZP_12580035.1| ribosome biogenesis GTPase YqeH [Streptococcus infantis X]
gi|343400244|gb|EGV12764.1| ribosome biogenesis GTPase YqeH [Streptococcus infantis X]
Length = 368
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 118/387 (30%), Positives = 191/387 (49%), Gaps = 48/387 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT++ G+ E K + V C RC L H + IT V
Sbjct: 6 CIGCGATIQTTDKTGLGFTPQSALE---KGLETGEVYCQRCFRLRHYNEITDVQ------ 56
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ + L + AL+V ++DI DFNGS + + N ++LV K D+
Sbjct: 57 -----LTDDDFLKLLHEVGDSDALVVNVIDIFDFNGSVIPGLPRFVSGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W++E ++ L + V LTS+++ I V +I+ +KGRDVY++G
Sbjct: 112 LPKSVKPGKISQWLMERAHEEGLRPVDVVLTSAQNKHAIKEVIDKIEHYRKGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G+++ S PGTTL I+I G +YDTP
Sbjct: 172 TNVGKSTLINAIIQEITGDQNVITT---------SRFPGTTLDKIEI-PLDDGSYIYDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + A++L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLTAKNLKYVSPKKEIKPKTYQLNPEQ--------------TLFLGGLGR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + F+ L+++ + A FY K LG LTPP K+K D
Sbjct: 268 FDFIAGEKQGFTAFF-DNELKLHRTKLEGASAFYDKHLGTLLTPPNSKEKE------DFP 320
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
+L++ F ++ +D+ ISGLGWI V
Sbjct: 321 KLVQHVFNIKDK--TDLVISGLGWIRV 345
>gi|417915755|ref|ZP_12559360.1| ribosome biogenesis GTPase YqeH [Streptococcus mitis bv. 2 str.
SK95]
gi|342832772|gb|EGU67062.1| ribosome biogenesis GTPase YqeH [Streptococcus mitis bv. 2 str.
SK95]
Length = 368
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 118/387 (30%), Positives = 191/387 (49%), Gaps = 48/387 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT++ G+ E K + V C RC L H + IT V
Sbjct: 6 CIGCGATIQTTDKTGLGFTPQSALE---KGLETGEVYCQRCFRLRHYNEITDVQ------ 56
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ + L + AL+V ++DI DFNGS + + N ++LV K D+
Sbjct: 57 -----LTDDDFLKLLHEVGDSDALVVNVIDIFDFNGSVIPGLPRFVSGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W++E ++ L + V LTS+++ I V +I+ +KGRDVY++G
Sbjct: 112 LPKSVKPGKISQWLMERAHEEGLRPVDVVLTSAQNKHAIKEVIDKIEHYRKGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G+++ S PGTTL I+I G +YDTP
Sbjct: 172 TNVGKSTLINAIIQEITGDQNVITT---------SRFPGTTLDKIEI-PLDDGSYIYDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + A++L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLTAKNLKYVSPKKEIKPKTYQLNPEQ--------------TLFLGGLGR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + F+ L+++ + A FY K LG LTPP K+K D
Sbjct: 268 FDFITGEKQGFTAFF-DNELKLHRTKLEGASAFYDKHLGTLLTPPNSKEKE------DFP 320
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
+L++ F ++ +D+ ISGLGWI V
Sbjct: 321 KLVQHVFNIKDK--TDLVISGLGWIRV 345
>gi|254852115|ref|ZP_05241463.1| GTP-binding protein YqeH [Listeria monocytogenes FSL R2-503]
gi|300764844|ref|ZP_07074834.1| GTPase [Listeria monocytogenes FSL N1-017]
gi|404281049|ref|YP_006681947.1| GTPase [Listeria monocytogenes SLCC2755]
gi|404286913|ref|YP_006693499.1| GTPase [Listeria monocytogenes serotype 7 str. SLCC2482]
gi|258605417|gb|EEW18025.1| GTP-binding protein YqeH [Listeria monocytogenes FSL R2-503]
gi|300514520|gb|EFK41577.1| GTPase [Listeria monocytogenes FSL N1-017]
gi|404227684|emb|CBY49089.1| putative GTPase [Listeria monocytogenes SLCC2755]
gi|404245842|emb|CBY04067.1| GTPase, putative [Listeria monocytogenes serotype 7 str. SLCC2482]
Length = 366
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 116/386 (30%), Positives = 185/386 (47%), Gaps = 50/386 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT + D GY K + V+C RC L H + I V
Sbjct: 7 CIGCGAVIQTEDPDKIGYA-------PKSSLNNEQVICKRCFRLKHYNEIQDVA------ 53
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ L+ + ++ALIV +VDI DF+GS+L + AG+NP++LV K D+
Sbjct: 54 -----LTDDDFLRILNQISSKQALIVYVVDIFDFDGSWLPGLPRFAGSNPVLLVGNKEDV 108
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + + + W+ ++ L V L S++ G + +I++ + G+DVY++G
Sbjct: 109 LPKSLNRDKLTRWMRTRAKEQGLAATDVVLVSAEKGHGFDTLLEKIEELRNGQDVYVVGC 168
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS IN ++K+ + +Q PGTTL I+I G L DTPG
Sbjct: 169 TNVGKSTLINRIIKQASGENNVITTSQ--------FPGTTLDKIEI-PLADGNVLVDTPG 219
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ HH+ A + L A+ P+ ++ F + E T+F G L R+
Sbjct: 220 IINHHQMAHFIDTTTLKAITPKKEVKPAVFQLNEEQ--------------TLFLGALARL 265
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D + L Y +L ++ +KAD Y+K+ G+ L PP EG + L +
Sbjct: 266 DYVSG-GRKSLVVYVSNNLPIHRTKLEKADALYEKQAGIVLQPP----TEEGMETL--PK 318
Query: 461 LLEIKFEDTERPASDVAISGLGWISV 486
L+ F E+ +D+ SGLGW+++
Sbjct: 319 LVPYSFTIKEK--ADIVFSGLGWVTI 342
>gi|289434771|ref|YP_003464643.1| GTPase [Listeria seeligeri serovar 1/2b str. SLCC3954]
gi|289171015|emb|CBH27557.1| GTPase, putative [Listeria seeligeri serovar 1/2b str. SLCC3954]
Length = 366
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 117/386 (30%), Positives = 184/386 (47%), Gaps = 50/386 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT + D GY K + V+C RC L H + I V
Sbjct: 7 CIGCGAIIQTEDPDKIGYA-------PKSSLNNEQVICKRCFRLKHYNEIQDVA------ 53
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ L+ + ++ALIV +VDI DF+GS+L + AG NP++LV K D+
Sbjct: 54 -----LTDDDFLRILNQISTKQALIVYVVDIFDFDGSWLPGLPRFAGNNPVLLVGNKEDV 108
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + + W+ ++ L+ V L S++ G + +I++ + G+DVY++G
Sbjct: 109 LPKSLKRDKLTRWMRTRAKEQGLSATDVVLVSAERGHGFDTLLEKIEELRNGQDVYVVGC 168
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS IN ++K+ + +Q PGTTL I+I G L DTPG
Sbjct: 169 TNVGKSTLINRIIKQASGENNVITTSQ--------FPGTTLDKIEI-PLADGNVLVDTPG 219
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ HH+ A + + L A+ P+ ++ F + E T+F G L R+
Sbjct: 220 IINHHQMAHFIDTDTLKAITPKKEVKPAVFQLNEEQ--------------TLFLGALARL 265
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D + L Y +L ++ +KAD Y+K+ G L PP EG K L +
Sbjct: 266 DYVSG-GRKSLVVYVSNNLPIHRTKLEKADALYEKQAGFVLQPP----TEEGMKTL--PK 318
Query: 461 LLEIKFEDTERPASDVAISGLGWISV 486
L+ F E+ +D+ SGLGW+++
Sbjct: 319 LVPYTFNVKEK--ADIVFSGLGWVTI 342
>gi|254824450|ref|ZP_05229451.1| GTP-binding protein YqeH [Listeria monocytogenes FSL J1-194]
gi|254992210|ref|ZP_05274400.1| GTP-binding protein YqeH [Listeria monocytogenes FSL J2-064]
gi|255520851|ref|ZP_05388088.1| GTP-binding protein YqeH [Listeria monocytogenes FSL J1-175]
gi|293593687|gb|EFG01448.1| GTP-binding protein YqeH [Listeria monocytogenes FSL J1-194]
Length = 366
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 116/386 (30%), Positives = 185/386 (47%), Gaps = 50/386 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT + D GY K + V+C RC L H + I V
Sbjct: 7 CIGCGAVIQTEDPDKIGYA-------PKSSLNNEQVICKRCFRLKHYNEIQDVA------ 53
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ L+ + ++ALIV +VDI DF+GS+L + AG+NP++LV K D+
Sbjct: 54 -----LTDDDFLRILNQISSKQALIVYVVDIFDFDGSWLPGLPRFAGSNPVLLVGNKEDV 108
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + + W+ ++ L V L S++ G ++ +I++ + G+DVY++G
Sbjct: 109 LPKSLKRDKLTRWMRTRAKEQGLAATDVVLVSAEKGHGFDTLSEKIEELRNGQDVYVVGC 168
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS IN ++K+ + +Q PGTTL I+I G L DTPG
Sbjct: 169 TNVGKSTLINRIIKQASGENNVITTSQ--------FPGTTLDKIEI-PLADGNVLVDTPG 219
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ HH+ A + L A+ P+ ++ F + E T+F G L R+
Sbjct: 220 IINHHQMAHFIDTTTLKAITPKKEVKPAVFQLNEEQ--------------TLFLGALARL 265
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D + L Y +L ++ +KAD Y+K+ G+ L PP EG + L +
Sbjct: 266 DYVSG-GRKSLVVYVSNNLPIHRTKLEKADALYEKQAGIVLQPP----TEEGMETL--PK 318
Query: 461 LLEIKFEDTERPASDVAISGLGWISV 486
L+ F E+ +D+ SGLGW+++
Sbjct: 319 LVPYSFTIKEK--ADIVFSGLGWVTI 342
>gi|425737432|ref|ZP_18855705.1| GTPase YqeH [Staphylococcus massiliensis S46]
gi|425482780|gb|EKU49936.1| GTPase YqeH [Staphylococcus massiliensis S46]
Length = 366
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 126/411 (30%), Positives = 200/411 (48%), Gaps = 67/411 (16%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA LQ+ + GYV + + K+ V+C RC L H + + VG
Sbjct: 7 CIGCGATLQSEDPKKSGYVP--AHNIGKED-----VICKRCFRLKHYNEVQDVG------ 53
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
+ +++ + L+ L +K ++V ++DI DF GSF+ I+ + G PIIL K+DL
Sbjct: 54 -----MDSEDFLDLLTGLSDKKGIVVNVIDIFDFEGSFIHAIKRIVGNKPIILAANKIDL 108
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + V +W+ L V L S++ G+ + I+K + DVYI+G+
Sbjct: 109 LPKQINKRRVTEWIKRTARSYGLETEVVVLLSAEKNIGLETLLETIEKYRGQDDVYIVGT 168
Query: 281 ANVGKSAFINALLK-KMGERDPAAAMAQKYRPIQSAVPGTTLGPIQI----DAFLGGGKL 335
NVGKS IN L++ +GE+D S PGTTL I I D+F +
Sbjct: 169 TNVGKSTLINKLIETSVGEKDVVTT---------SRFPGTTLDMIDIPLNDDSF-----M 214
Query: 336 YDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWG 395
+DTPG+ H+ +V ++L + P+ ++ + F + NE G T+++G
Sbjct: 215 FDTPGIIQEHQMTHLVSDKELKIIMPKKEIKQRVFQL-------NE-------GQTLYFG 260
Query: 396 GLVRIDLLK--VLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGW 453
GL RID + P C Y L ++ T+ AD ++ +LG L PP K
Sbjct: 261 GLARIDYHEGGKRPLVC---YFSNELHIHRTKTENADRLWETKLGDVLEPP----KDPSQ 313
Query: 454 KGLDRERLLEIKFEDTERPASDVAISGLGWISVEP----VRRSIRNSDINL 500
LD+ + +++ +T + DV ISGLG+I++E V + RN D+ L
Sbjct: 314 FNLDQIKTVKL---ETGKHKKDVMISGLGFITIESGAKFVVKVPRNVDVTL 361
>gi|168486390|ref|ZP_02710898.1| GTP-binding protein [Streptococcus pneumoniae CDC1087-00]
gi|418185507|ref|ZP_12822047.1| GTPase family protein [Streptococcus pneumoniae GA47283]
gi|419511011|ref|ZP_14050652.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae NP141]
gi|419530906|ref|ZP_14070432.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA40028]
gi|421215847|ref|ZP_15672768.1| hypothetical protein AMCSP04_001566 [Streptococcus pneumoniae
2070109]
gi|183570601|gb|EDT91129.1| GTP-binding protein [Streptococcus pneumoniae CDC1087-00]
gi|353848237|gb|EHE28253.1| GTPase family protein [Streptococcus pneumoniae GA47283]
gi|379571315|gb|EHZ36273.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA40028]
gi|379631614|gb|EHZ96191.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae NP141]
gi|395580054|gb|EJG40549.1| hypothetical protein AMCSP04_001566 [Streptococcus pneumoniae
2070109]
Length = 368
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 119/387 (30%), Positives = 191/387 (49%), Gaps = 48/387 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT++ G+ E K + V C RC L H + IT V
Sbjct: 6 CIGCGATIQTTDKAGLGFTPQSALE---KGLETGEVYCQRCFRLRHYNEITDVQ------ 56
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ + L + AL+V ++DI DFNGS + + N ++LV K D+
Sbjct: 57 -----LTNDDFLKLLHEVGDSDALVVNVIDIFDFNGSVIPGLPRFVSGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W+++ ++ L + V LTS+++ I V +I+ +KGRDVY++G
Sbjct: 112 LPKSVKSGKISQWLMKRAHEEGLRPVDVVLTSAQNKHAIKEVIDKIEYYRKGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G+++ S PGTTL I+I G +YDTP
Sbjct: 172 TNVGKSTLINAIIQEITGDQNVITT---------SRFPGTTLDKIEI-PLDDGSYIYDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + A++L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLTAKNLKYVSPKKEIKPKTYQLNPEQ--------------TLFLGGLGR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + F+ L+++ + A FY K LG LTPP K+K D
Sbjct: 268 FDFIAGEKQGFTAFF-DNELKLHRSKLEGASAFYDKHLGTLLTPPNSKEKE------DFP 320
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
RL++ F T + +D+ ISGLGWI V
Sbjct: 321 RLVQHVF--TIKDKTDLVISGLGWIRV 345
>gi|312863524|ref|ZP_07723762.1| ribosome biogenesis GTPase YqeH [Streptococcus vestibularis F0396]
gi|311101060|gb|EFQ59265.1| ribosome biogenesis GTPase YqeH [Streptococcus vestibularis F0396]
Length = 372
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 116/388 (29%), Positives = 188/388 (48%), Gaps = 48/388 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT + + G+ + KK + + C RC L H + I V
Sbjct: 6 CIGCGAQIQTEDKEKAGFTPASSI---KKAEETGELYCQRCFRLRHYNEIVDV------- 55
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ DE + L + AL+V +VDI DFNGS + + N ++LV K D+
Sbjct: 56 ----HITDDEFLKLLHEVGDSDALVVNVVDIFDFNGSIIPGLSRFVSGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
L K V W+ E ++ + + V LTS+++ I + I+K +KGRDVY++G
Sbjct: 112 LSKSVKDGKVTQWLTERAHEEGMRPVDVMLTSAQNHHAIKELIQRIEKLRKGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA++K++ G++D S PGTTL I+I G ++DTP
Sbjct: 172 TNVGKSTLINAIIKEITGDKDIITT---------SRFPGTTLDKIEI-PLDDGTYIFDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + A+DL ++P+ ++ +++ + + T+F GGL R
Sbjct: 222 GIIHRHQMAHYLSAKDLKYVSPKKEIKPKTYQLNASQ--------------TLFLGGLGR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + F+ +L+++ + AD FY K +G L PP K+ A K
Sbjct: 268 FDFIDGDKQGFTAFF-DNNLKLHRTKLEGADAFYDKHVGSLLMPPGPKELANFPK----- 321
Query: 460 RLLEIKFEDTERPASDVAISGLGWISVE 487
++ E T + +D+ SGLGWI V+
Sbjct: 322 ---LVRHEFTVKDKTDIVFSGLGWIRVQ 346
>gi|307706091|ref|ZP_07642910.1| conserved hypothetical protein [Streptococcus mitis SK321]
gi|307618491|gb|EFN97639.1| conserved hypothetical protein [Streptococcus mitis SK321]
Length = 368
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 119/387 (30%), Positives = 190/387 (49%), Gaps = 48/387 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT + G+ E K + V C RC L H + IT V
Sbjct: 6 CIGCGATIQTIDKAGLGFTPQSALE---KGLETGEVYCQRCFRLRHYNEITDVQ------ 56
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ + L + AL+V ++DI DFNGS + + N ++LV K D+
Sbjct: 57 -----LTDDDFLKLLHEVGDSDALVVNVIDIFDFNGSVIPGLPRFVSGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W++E ++ L + V LTS+++ I V +I+ +KGRDVY++G
Sbjct: 112 LPKSVKPGKISQWLMERAYEEGLRPVDVVLTSAQNKHAIKEVIDKIEHYRKGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G+++ S PGTTL I+I G +YDTP
Sbjct: 172 TNVGKSTLINAIIQEITGDQNVITT---------SRFPGTTLDKIEI-PLDDGSYIYDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + A++L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLTAKNLKYVSPKKEIKPKTYQLNPEQ--------------TLFLGGLGR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + F+ L+++ + A FY K LG LTPP K+K D
Sbjct: 268 FDFIAGEKQGFTAFF-DNELKLHRTKLEGASAFYDKHLGTLLTPPNSKEKE------DFP 320
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
+L++ F E+ +D+ ISGLGWI V
Sbjct: 321 KLVQHVFNIKEK--TDLVISGLGWIRV 345
>gi|418976181|ref|ZP_13524067.1| ribosome biogenesis GTPase YqeH [Streptococcus mitis SK575]
gi|383351855|gb|EID29618.1| ribosome biogenesis GTPase YqeH [Streptococcus mitis SK575]
Length = 368
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 118/387 (30%), Positives = 191/387 (49%), Gaps = 48/387 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT++ G+ E K + V C RC L H + IT V
Sbjct: 6 CIGCGATIQTTDKAGLGFTPQSALE---KGLETGEVYCQRCFRLRHYNEITDVQ------ 56
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ + L + AL+V ++DI DFNGS + + N ++LV K D+
Sbjct: 57 -----LTDDDFLKLLHEVGDSDALVVNVIDIFDFNGSVIPGLPRFVSGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W++E ++ L + V LTS+++ I V +I+ +KGRDVY++G
Sbjct: 112 LPKSVKPGKISQWLMERAHEEGLRPVDVVLTSAQNKHAIKEVIDKIEHYRKGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G+++ S PGTTL I+I G +YDTP
Sbjct: 172 TNVGKSTLINAIIQEITGDQNVITT---------SRFPGTTLDKIEI-PLDDGSYIYDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + A++L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLTAKNLKYVSPKKEIKPKTYQLNPEQ--------------TLFLGGLGR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + F+ L+++ + A FY K +G LTPP K+K D
Sbjct: 268 FDFIAGEKQGFTAFF-DNELKLHRTKLEGASAFYDKHVGTLLTPPNSKEKE------DFP 320
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
+L++ F E+ +D+ ISGLGWI V
Sbjct: 321 KLVQHVFNIKEK--TDLVISGLGWIRV 345
>gi|418975267|ref|ZP_13523176.1| ribosome biogenesis GTPase YqeH [Streptococcus oralis SK1074]
gi|383348638|gb|EID26597.1| ribosome biogenesis GTPase YqeH [Streptococcus oralis SK1074]
Length = 368
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 126/426 (29%), Positives = 201/426 (47%), Gaps = 65/426 (15%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT + G+ E K + V C RC L H + IT V
Sbjct: 6 CIGCGATIQTIDKAGLGFTPQSALE---KGLETGEVYCQRCFRLRHYNEITDVQ------ 56
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ + L + AL+V ++DI DFNGS + + N ++LV K D+
Sbjct: 57 -----LTDDDFLKLLHEVGDSDALVVNVIDIFDFNGSVIPGLPRFVSGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W++E ++ L + V LTS+++ I V +I+ +KGRDVY++G
Sbjct: 112 LPKSVKPGKISQWLMERAHEEGLRPVDVVLTSAQNKHAIKEVIDKIEHYRKGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G+++ S PGTTL I+I G +YDTP
Sbjct: 172 TNVGKSTLINAIIQEITGDQNVITT---------SRFPGTTLDKIEI-PLDDGSYIYDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + A++L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLTAKNLKYVSPKKEIKPKTYQLNPEQ--------------TLFLGGLGR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + F+ L+++ + A FY K LG LTPP K+K D
Sbjct: 268 FDFISGEKQGFTAFFD-NELKLHRTKLESASAFYDKHLGTLLTPPNSKEKE------DFP 320
Query: 460 RLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVEV 519
+L++ F T + +D+ ISGLGWI V +G +AV P+ V V
Sbjct: 321 KLVQHVF--TIKDKTDLVISGLGWIRV-----------------TGTAKVAVWAPEGVAV 361
Query: 520 FVRNPM 525
R +
Sbjct: 362 ITRKAI 367
>gi|418146990|ref|ZP_12783768.1| GTPase family protein [Streptococcus pneumoniae GA13637]
gi|353812565|gb|EHD92800.1| GTPase family protein [Streptococcus pneumoniae GA13637]
Length = 368
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 119/387 (30%), Positives = 190/387 (49%), Gaps = 48/387 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT++ G+ E K + V C RC L H + IT V
Sbjct: 6 CIGCGATIQTTDKAGLGFTPQSALE---KGLETGEVYCQRCFRLRHYNEITDVQ------ 56
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ + L + AL+V ++DI DFNGS + + N ++LV K D+
Sbjct: 57 -----LTNDDFLKLLHEVGDSDALVVNVIDIFDFNGSVIPGLPRFVSGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W++ ++ L + V LTS+++ I V +I+ +KGRDVY++G
Sbjct: 112 LPKSVKSGKISQWLMRRAHEEGLRPVDVVLTSAQNKHAIKEVIDKIEHYRKGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G+++ S PGTTL I+I G +YDTP
Sbjct: 172 TNVGKSTLINAIIQEITGDQNVITT---------SRFPGTTLDKIEI-PLDDGSYIYDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + A++L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLTAKNLKYVSPKKEIKPKTYQLNPEQ--------------TLFLGGLGR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + F+ L+++ + A FY K LG LTPP K+K D
Sbjct: 268 FDFIAGEKQGFTAFF-DNELKLHRSKLEGASAFYDKHLGTLLTPPNSKEKE------DFP 320
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
RL++ F T + +D+ ISGLGWI V
Sbjct: 321 RLVQHVF--TIKDKTDLVISGLGWIRV 345
>gi|229544804|ref|ZP_04433529.1| GTP-binding protein [Enterococcus faecalis TX1322]
gi|256854161|ref|ZP_05559526.1| GTP-binding protein YqeH [Enterococcus faecalis T8]
gi|422684471|ref|ZP_16742707.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX4000]
gi|229310076|gb|EEN76063.1| GTP-binding protein [Enterococcus faecalis TX1322]
gi|256711104|gb|EEU26147.1| GTP-binding protein YqeH [Enterococcus faecalis T8]
gi|315030785|gb|EFT42717.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX4000]
Length = 369
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 128/390 (32%), Positives = 188/390 (48%), Gaps = 49/390 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT GY +E K + V C RC L + + I V
Sbjct: 7 CIGCGAIIQTENPHELGYTPKTAFE---KGMETGEVYCQRCFRLRYYNDIQDV------- 56
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
Q D LR L+ L E ALIV +VDI DFNGS + + G NP++LV KVD+
Sbjct: 57 ---QLTDDDFLR-LLNGLGTEDALIVNVVDIFDFNGSLIPGLHRFIGDNPVLLVGNKVDI 112
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W+ E + L + V LTS K + + I+K ++GRDVY++G
Sbjct: 113 LPKSLKKPKMVQWMRERAHEAGLRPVDVLLTSGKKPQEMQELLDTIEKYREGRDVYVVGV 172
Query: 281 ANVGKSAFINALLKK-MGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS IN ++++ +G +D S PGTTL I+I G L DTP
Sbjct: 173 TNVGKSTLINQIIQQTVGVQDVITT---------SQFPGTTLDKIEI-PLDDGHFLIDTP 222
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + +DL +APQ ++ + + + +E T+F GGL R
Sbjct: 223 GIIHRHQMAHYLGKKDLKIIAPQKEIKPKVYQLNAEQ--------------TLFLGGLAR 268
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D ++ ++ Y L ++ T AD FY+K +G L PP + AE + L
Sbjct: 269 FDYVQG-AKSSFIAYVSNDLNLHRTKTATADAFYEKHVGGLLQPPRADEVAE-FPEL--- 323
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV-EP 488
++FE + + +D+ +GLGWI+V EP
Sbjct: 324 ----VRFEFSVKEKTDIVFAGLGWITVTEP 349
>gi|270293291|ref|ZP_06199500.1| GTP-binding protein [Streptococcus sp. M143]
gi|270278140|gb|EFA23988.1| GTP-binding protein [Streptococcus sp. M143]
Length = 368
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 117/387 (30%), Positives = 191/387 (49%), Gaps = 48/387 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT++ G+ E K + V C RC L H + IT +
Sbjct: 6 CIGCGATIQTTDKAGLGFTPQSALE---KGLETGEVYCQRCFRLRHYNEITDIQ------ 56
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ + L + AL+V ++DI DFNGS + + N ++LV K D+
Sbjct: 57 -----LTDDDFLKLLHEVGDSDALVVNVIDIFDFNGSVIPGLLRFVSGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W++E ++ L + V LTS+++ I V +I+ +KGRDVY++G
Sbjct: 112 LPKSVKPGKISQWLMERAHEEGLRPVDVVLTSAQNKHAIKEVIDKIEHYRKGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G+++ S PGTTL I+I G +YDTP
Sbjct: 172 TNVGKSTLINAIIQEITGDQNVITT---------SRFPGTTLDKIEI-PLDDGSYIYDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + A++L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLTAKNLKYVSPKKEIKPKTYQLNPEQ--------------TLFLGGLGR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + F+ L+++ + A FY K LG LTPP K+K D
Sbjct: 268 FDFISGEKQGFTAFF-DNELKLHRTKLEGASAFYDKHLGTLLTPPNSKEKE------DFP 320
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
+L++ F ++ +D+ ISGLGWI V
Sbjct: 321 KLVQHVFNIKDK--TDLVISGLGWIRV 345
>gi|325569902|ref|ZP_08145896.1| GTP-binding protein [Enterococcus casseliflavus ATCC 12755]
gi|325157025|gb|EGC69193.1| GTP-binding protein [Enterococcus casseliflavus ATCC 12755]
Length = 377
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 118/386 (30%), Positives = 182/386 (47%), Gaps = 46/386 (11%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT+ + GY E K + V C RC L H + I V
Sbjct: 15 CIGCGAVIQTTNPNELGYTPQSALE---KGLESGEVYCQRCFRLRHYNEIQDVS------ 65
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ L+ + ++ALIV +VDI DFNGS + + G NP++LV KVD+
Sbjct: 66 -----LTDDDFLRLLNEIGEKEALIVNVVDIFDFNGSLIPGLHRFVGNNPVLLVGNKVDI 120
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + + W+ E + L + V LTS+K + I+ ++GRDVY++G
Sbjct: 121 LPKSLKKSKMTQWMKERAHEAGLRPVDVLLTSAKKPGETEALLQAIETYREGRDVYVVGV 180
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS IN ++K+ + S PGTTL I+I G L DTPG
Sbjct: 181 TNVGKSTLINQIIKQTAGINELITT--------SRFPGTTLDKIEI-PLDDGHFLIDTPG 231
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ H+ A + +DL +AP ++ + + + E T+F GGL R
Sbjct: 232 IIHRHQMAHYLGKKDLKIVAPAKEIKPKVYQLNPEQ--------------TLFLGGLARF 277
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D ++ + Y + ++ KADEFY+K +G L PP + A D
Sbjct: 278 DFIQG-ERSSFIAYVANDVAIHRTKLSKADEFYEKHVGGLLQPPRADEVA------DFPE 330
Query: 461 LLEIKFEDTERPASDVAISGLGWISV 486
L ++FE + + +D+ +GLGWI++
Sbjct: 331 L--VRFEFSIKEKTDIVFAGLGWITI 354
>gi|417847402|ref|ZP_12493370.1| ribosome biogenesis GTPase YqeH [Streptococcus mitis SK1073]
gi|339457050|gb|EGP69631.1| ribosome biogenesis GTPase YqeH [Streptococcus mitis SK1073]
Length = 368
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 117/387 (30%), Positives = 192/387 (49%), Gaps = 48/387 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT++ G+ E K + V C RC L H + IT V
Sbjct: 6 CIGCGATIQTTDKAGLGFTPQSALE---KGLETGEVYCQRCFRLRHYNEITDVK------ 56
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ + L + AL+V ++DI DFNGS + + N ++LV K D+
Sbjct: 57 -----LTDDDFLKLLHEVGDSDALVVNVIDIFDFNGSVIPGLPRFVSGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W++E ++ L + V LTS+++ I V +I+ +KGRDVY++G
Sbjct: 112 LPKSVKPGKISQWLMERAHEEGLRPIDVVLTSAQNKHAIKEVIDKIEHYRKGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G+++ S PGTTL I+I G +YDTP
Sbjct: 172 TNVGKSTLINAIIQEITGDQNVITT---------SRFPGTTLDKIEI-PLDDGSYIYDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + A++L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLTAKNLKYVSPKKEIKPKTYQLNPEQ--------------TLFLGGLGR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D ++ + F+ L+++ + A FY K +G LTPP K+K D
Sbjct: 268 FDFIEGEKQGFTAFF-DNELKLHRTKLEGASAFYDKHVGTLLTPPNSKEKE------DFP 320
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
+L++ F ++ +D+ ISGLGWI V
Sbjct: 321 KLVQHVFNIKDK--TDLVISGLGWIRV 345
>gi|449963594|ref|ZP_21810888.1| GTP-binding protein YqeH [Streptococcus mutans 15VF2]
gi|449173369|gb|EMB75946.1| GTP-binding protein YqeH [Streptococcus mutans 15VF2]
Length = 368
Score = 168 bits (425), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 114/387 (29%), Positives = 192/387 (49%), Gaps = 48/387 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT+ + GY T E K + + C RC L H + IT V
Sbjct: 6 CIGCGAQIQTTAKEQAGYTPKSTLE---KGLESGKIYCQRCFRLRHYNEITDV------- 55
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
+S D+ + L + + L+V ++DI DFNGS + ++ +N ++LV K D+
Sbjct: 56 ----HISDDDFLKLLHEVGDSRTLVVNVIDIFDFNGSVIPGLQRFISSNDLLLVGNKADI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W++E ++ L L + LTS+++ I + ++I++ ++GRDVY++G
Sbjct: 112 LPKSVKSGKITQWLMERAHEEGLRPLDLILTSAQNKWAIKELIAKIEELRQGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G+++ S PGTTL I+I G ++DTP
Sbjct: 172 TNVGKSTLINAIIQEITGDKNIITT---------SRFPGTTLDKIEI-PLNDGSYIFDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + + L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLSDKALKYISPKKEIKPKTYQLNPEQ--------------TLFLGGLAR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + T Y +L+++ AD FY K +G LTPP K+ A K
Sbjct: 268 FDYV-TGDKQGFTAYFDNNLKLHRTKLAGADTFYDKHIGSLLTPPDKKEMAAFPK----- 321
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
++ E T + +D+ SGLGWI +
Sbjct: 322 ---LVRHEFTIKEKTDLVFSGLGWIRI 345
>gi|366089348|ref|ZP_09455821.1| GTPase YqeH [Lactobacillus acidipiscis KCTC 13900]
Length = 374
Score = 168 bits (425), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 117/396 (29%), Positives = 190/396 (47%), Gaps = 50/396 (12%)
Query: 95 NSAVASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVG 154
N+ C GCGA +Q+ + PGY KK + + C RC L H + ++ V
Sbjct: 4 NNEELYCIGCGAKIQSDDPKQPGYTPVSAI---KKGLENDELYCQRCFRLRHYNEVSDVS 60
Query: 155 GNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILV 214
++ D+ L+ + ALIV ++D+ DFNGS + I G NP+++V
Sbjct: 61 -----------LTDDDFLALLNQIGSADALIVNVIDVFDFNGSLIPGIHRFVGNNPVLMV 109
Query: 215 VTKVDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRD 274
K DLLP+ + + DWV + + ++ + V +TS+ + + I+K ++GRD
Sbjct: 110 ANKEDLLPRSLKRSKLKDWVRQRANAEGIHPVDVIMTSATKQHALEELLKAIEKYREGRD 169
Query: 275 VYILGSANVGKSAFINALLKK-MGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGG 333
VY++G NVGKS IN ++K+ G +D S+ PGTTL I+I G
Sbjct: 170 VYVVGVTNVGKSTLINQIIKRSTGMQDLITT---------SSFPGTTLDKIEI-PLDDGR 219
Query: 334 KLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIF 393
+ DTPG+ + A + A++L PQ +R + + + G T+F
Sbjct: 220 MIVDTPGIIHKDQMAHYLSAKELRLATPQKEIRPKVYQLAG--------------GQTLF 265
Query: 394 WGGLVRIDLLKVLPET--CLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAE 451
+GGL R DL+ P T + Y +LQV+ +KAD F+ + G L PP + ++
Sbjct: 266 FGGLARFDLI-TGPSTRNGVVVYMENNLQVHRTKLEKADAFFVRHQGELLQPPTTGELSD 324
Query: 452 GWKGLDRERLLEIKFEDTERPASDVAISGLGWISVE 487
+ ++R FE R SD+ GLGW++V+
Sbjct: 325 -FPPMER-------FEFKVREKSDIVFEGLGWVTVK 352
>gi|270290433|ref|ZP_06196658.1| ribosome biogenesis GTPase YqeH [Pediococcus acidilactici 7_4]
gi|270281214|gb|EFA27047.1| ribosome biogenesis GTPase YqeH [Pediococcus acidilactici 7_4]
Length = 369
Score = 168 bits (425), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 120/394 (30%), Positives = 182/394 (46%), Gaps = 49/394 (12%)
Query: 94 VNSAVASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAV 153
+N C GCGA LQT ++ PGY KK + + C RC L H + I V
Sbjct: 1 MNEEEIRCIGCGATLQTEDAQLPGYTPASAL---KKGLESGQLYCQRCFRLRHYNEIAPV 57
Query: 154 GGNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIIL 213
+S D+ R+ LS + +L+V +VD+ DFNGS + + G NP++L
Sbjct: 58 S-----------ISDDDFRKLLSQISDSDSLVVYVVDMFDFNGSLIPGLHRFVGDNPVLL 106
Query: 214 VVTKVDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGR 273
V K D+ PK + + +W+ + + + V +TS+K + + +I++ + GR
Sbjct: 107 VGNKADVFPKSIKRHRMREWLRQQAKANGIEPVDVMITSAKQRPAVEQLFDKIEQLRGGR 166
Query: 274 DVYILGSANVGKSAFINALLK-KMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGG 332
DVY++G NVGKS IN+L+ + G +D S PGTTL I+I F
Sbjct: 167 DVYVVGVTNVGKSTLINSLIALRNGIKDVITT---------SRFPGTTLDRIEI-PFDDH 216
Query: 333 GKLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTI 392
K+ DTPG+ + + A V+ EDL ++P+ ++ + + + E T+
Sbjct: 217 SKMIDTPGIVHNDQMAHVLTTEDLKYISPKKTIKPRVYQLGDEQ--------------TL 262
Query: 393 FWGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEG 452
F G L R D +T Y +L ++ AD FY+K G LTPP AE
Sbjct: 263 FAGALARFDYEN--STGSVTAYFDNNLMIHRTKLANADHFYEKHAGELLTPP----AAEN 316
Query: 453 WKGLDRERLLEIKFEDTERPASDVAISGLGWISV 486
L K E+ SDV GLGWI+V
Sbjct: 317 LANLPELARHHFKIEED----SDVVFEGLGWIAV 346
>gi|392989973|ref|YP_006488566.1| GTPase YqeH [Enterococcus hirae ATCC 9790]
gi|392337393|gb|AFM71675.1| GTPase YqeH [Enterococcus hirae ATCC 9790]
Length = 369
Score = 168 bits (425), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 125/388 (32%), Positives = 185/388 (47%), Gaps = 48/388 (12%)
Query: 100 SCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGY 159
C GCGA +QT + GY E K + V C RC L H + I V
Sbjct: 6 QCIGCGATIQTDHPNELGYTPKAALE---KGLESGEVYCQRCFRLRHYNEIQDVS----- 57
Query: 160 AGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVD 219
++ D+ L+ L +E ALIV +VDI DFNGS + + G NP++LV KVD
Sbjct: 58 ------LTDDDFLRLLNELGQEDALIVNVVDIFDFNGSLIPGLHRFVGNNPVLLVGNKVD 111
Query: 220 LLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILG 279
+LPK + W+ E + L + V LTS+K + + +I++ ++GRDVYI+G
Sbjct: 112 ILPKSLKKPKMIQWMKERAHEAGLRPVEVLLTSAKKANEMENLLKKIEEYREGRDVYIVG 171
Query: 280 SANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDT 338
NVGKS IN ++K G +D S PGTTL I+I G L DT
Sbjct: 172 VTNVGKSTLINQIIKNTAGVKDVITT---------SQFPGTTLDKIEI-PLDDGHFLIDT 221
Query: 339 PGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLV 398
PG+ H+ A + +DL +AP ++ + + + NE G T+F GGL
Sbjct: 222 PGIIHRHQMAHYLGKKDLRIIAPTKEIKPKGYQL-------NE-------GQTLFLGGLA 267
Query: 399 RIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDR 458
R D + + + Y + ++ KADEFY K +G L PP + E + L
Sbjct: 268 RFDFISGQRGSFIA-YVSNDVTIHRTKLAKADEFYVKHVGGLLQPPRPDEVNE-FPEL-- 323
Query: 459 ERLLEIKFEDTERPASDVAISGLGWISV 486
++FE + + +D+ +GLGWI+V
Sbjct: 324 -----VRFEFSVKEKTDIVFAGLGWITV 346
>gi|423335620|ref|ZP_17313395.1| GTPase [Lactobacillus reuteri ATCC 53608]
gi|337728850|emb|CCC03969.1| GTPase [Lactobacillus reuteri ATCC 53608]
Length = 375
Score = 167 bits (424), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 130/425 (30%), Positives = 192/425 (45%), Gaps = 63/425 (14%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG+ +QT + + GY E K+ + + C RC L H + I V
Sbjct: 13 CIGCGSIIQTEDPNGLGYTPKSALEKGKETGE---LYCQRCFRLRHYNEIAPVS------ 63
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ L+ +R ALIV +VD+ DFNGS + + G NP++LV K DL
Sbjct: 64 -----LTDDDFLRLLNQIRDANALIVYVVDVFDFNGSLIPGLHRFVGDNPVLLVGNKEDL 118
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LP+ + DW+ + L + L S+K I + I+K + RDVY++G
Sbjct: 119 LPRSLRRPKLTDWIRQQANIAGLRPIDTVLVSAKKNHQIDHLLDVIEKYRHNRDVYVVGV 178
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS IN ++K+ K S PGTTL I+I G L DTPG
Sbjct: 179 TNVGKSTLINQIIKQ--------RTGVKELITTSRFPGTTLDKIEI-PLDDGHVLVDTPG 229
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ + A V+ +DL +APQ ++ +++ + +G T+F GG+ R
Sbjct: 230 IIHQEQMAHVLSPKDLKIVAPQKEIKPKTYQLN--------------DGQTLFLGGVARF 275
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D L + Y +L ++ AD FY K LG LTPP +K E + L+R
Sbjct: 276 DYLHG-ERAGMVAYFDNNLPIHRTKLSNADNFYAKHLGDLLTPPTSDEKNE-FPPLER-- 331
Query: 461 LLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVEVF 520
+F TE+ SD+ GLGWI+V P + ++ A VPK V
Sbjct: 332 ---YEFHITEK--SDIVFEGLGWITV-PAKTTV----------------AAWVPKGVGAL 369
Query: 521 VRNPM 525
VR M
Sbjct: 370 VRRAM 374
>gi|417793547|ref|ZP_12440821.1| ribosome biogenesis GTPase YqeH [Streptococcus oralis SK255]
gi|334272686|gb|EGL91046.1| ribosome biogenesis GTPase YqeH [Streptococcus oralis SK255]
Length = 368
Score = 167 bits (424), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 118/387 (30%), Positives = 191/387 (49%), Gaps = 48/387 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT++ G+ E K + V C RC L H + IT V
Sbjct: 6 CIGCGATIQTTDKAGLGFTPQSALE---KGLETGEVYCQRCFRLRHYNEITDVQ------ 56
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ + L + +L+V ++DI DFNGS + + N ++LV K D+
Sbjct: 57 -----LTDDDFLKLLHEVGDSDSLVVNVIDIFDFNGSVIPGLPRFVSGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W++E ++ L + V LTS+++ I V +I+ +KGRDVY++G
Sbjct: 112 LPKSVKPGKISQWLMERAHEEGLRPVDVVLTSAQNKHAIKEVIDKIEHYRKGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G+++ S PGTTL I+I G +YDTP
Sbjct: 172 TNVGKSTLINAIIQEITGDQNVITT---------SRFPGTTLDKIEI-PLDDGSYIYDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + A++L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLTAKNLKYVSPKKEIKPKTYQLNPEQ--------------TLFLGGLGR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + F+ L+++ + A FY K LG LTPP K+K D
Sbjct: 268 FDFIAGEKQGFTAFF-DNELKLHRTKLEGASTFYDKHLGTLLTPPNSKEKE------DFP 320
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
+L++ F T + +D+ ISGLGWI V
Sbjct: 321 KLVQHVF--TIKDKTDLVISGLGWIRV 345
>gi|322374823|ref|ZP_08049337.1| ribosome biogenesis GTPase YqeH [Streptococcus sp. C300]
gi|321280323|gb|EFX57362.1| ribosome biogenesis GTPase YqeH [Streptococcus sp. C300]
Length = 368
Score = 167 bits (424), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 119/387 (30%), Positives = 191/387 (49%), Gaps = 48/387 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT++ G+ E K + V C RC L H + IT V
Sbjct: 6 CIGCGATIQTTDKTGLGFTPQSALE---KGLETGEVYCQRCFRLRHYNEITDVQ------ 56
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ + L + AL+V ++DI DFNGS + + N ++LV K D+
Sbjct: 57 -----LTDDDFLKLLHEVGDSDALVVNVIDIFDFNGSVIPGLPRFVSGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W++E ++ L + V LTS+++ I V +I+ +KGRDVY++G
Sbjct: 112 LPKSVKPGKISQWLMERAHEEGLRPVDVVLTSAQNKHAIKEVIDKIEYYRKGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G+++ S PGTTL I+I G +YDTP
Sbjct: 172 TNVGKSTLINAIIQEITGDQNVITT---------SRFPGTTLDKIEI-PLDDGAYIYDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + A++L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLTAKNLKYVSPKKEIKPKTYQLNPEQ--------------TLFLGGLGR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + F+ L+++ + A FY K LG LTPP K+K D
Sbjct: 268 FDFIAGEKQGFTAFF-DNELKLHRTKLEGACAFYDKHLGTLLTPPNSKEKE------DFP 320
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
+L+E F ++ +D+ ISGLGWI V
Sbjct: 321 KLVEHVFAIKDK--TDLVISGLGWIRV 345
>gi|422702221|ref|ZP_16760059.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX1302]
gi|315166303|gb|EFU10320.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX1302]
Length = 369
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 128/390 (32%), Positives = 187/390 (47%), Gaps = 49/390 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT GY +E K + V C RC L H + I V
Sbjct: 7 CIGCGAIIQTENPHELGYTPKTAFE---KGMETGEVYCQRCFRLRHYNDIQDV------- 56
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
Q D LR L+ L E ALIV +VDI DFNGS + + G NP++LV KVD+
Sbjct: 57 ---QLTDDDFLR-LLNGLGTEDALIVNVVDIFDFNGSLIPGLHRFIGDNPVLLVGNKVDI 112
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W+ E + L + V LTS K + + I+K ++ RDVY++G
Sbjct: 113 LPKSLKKPKMVQWMRERAHEAGLRPVDVLLTSGKKPQEMQELLDTIEKYREDRDVYVVGV 172
Query: 281 ANVGKSAFINALLKK-MGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS IN ++++ +G +D S PGTTL I+I G L DTP
Sbjct: 173 TNVGKSTLINQIIQQTVGVQDVITT---------SQFPGTTLDKIEI-PLDDGHFLIDTP 222
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + +DL +APQ ++ + + + +E T+F GGL R
Sbjct: 223 GIIHRHQMAHYLGKKDLKIIAPQKEIKPKVYQLNAEQ--------------TLFLGGLAR 268
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D ++ ++ Y L ++ T AD FY+K +G L PP + AE + L
Sbjct: 269 FDYVQG-AKSSFIAYVSNDLNLHRTKTATADAFYEKHVGGLLQPPRADEVAE-FPEL--- 323
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV-EP 488
++FE + + +D+ +GLGWI+V EP
Sbjct: 324 ----VRFEFSVKEKTDIVFAGLGWITVTEP 349
>gi|336064941|ref|YP_004559800.1| putative GTPase [Streptococcus pasteurianus ATCC 43144]
gi|334283141|dbj|BAK30714.1| putative GTPase [Streptococcus pasteurianus ATCC 43144]
Length = 372
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 121/393 (30%), Positives = 191/393 (48%), Gaps = 48/393 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +Q + + GY E K + + C RC L H + IT V
Sbjct: 6 CIGCGAKIQIEDKEKVGYTPKAALE---KGLESGELYCQRCFRLRHYNEITDV------- 55
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ DE + L + AL+V +VDI DFNGS + + N ++LV K D+
Sbjct: 56 ----HITDDEFLKLLHEVGDSDALVVNVVDIFDFNGSVIPGLPRFVSGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + V W+ E ++ L + V LTS+++ I + +I+K ++GRDVY++G
Sbjct: 112 LPKSVKDSKVTQWLTERAHEEGLRPVDVILTSAQNHQAIKDLIEKIEKLRRGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA++K++ GE+D S PGTTL I+I G ++DTP
Sbjct: 172 TNVGKSTLINAIIKEITGEKDIITT---------SRFPGTTLDKIEI-PLDDGSYIFDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + ++L ++P+ ++ +++ + E T+F GL R
Sbjct: 222 GIIHRHQMAHYLGDKNLKYISPKKEIKPKTYQLNPEQ--------------TLFLAGLGR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + T Y +L+++ AD Y K +G LTPPI K+ A D
Sbjct: 268 FDFISG-DKQGFTAYFDNNLKLHRTKLAGADALYDKHVGSLLTPPIDKELA------DFP 320
Query: 460 RLLEIKFEDTERPASDVAISGLGWISVEPVRRS 492
+L ++ E T + DV SGLGWI ++ + S
Sbjct: 321 KL--VRHEFTIKAKMDVVYSGLGWIRIKASQDS 351
>gi|433448806|ref|ZP_20411671.1| GTPase YqeH [Weissella ceti NC36]
gi|429539195|gb|ELA07232.1| GTPase YqeH [Weissella ceti NC36]
Length = 380
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 115/387 (29%), Positives = 188/387 (48%), Gaps = 47/387 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT+ES+ GY +K + + +LC RC L H + I V
Sbjct: 17 CIGCGALIQTTESEELGYT---PMSALRKGFENEEILCQRCFRLRHYNEIQPVS------ 67
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ R L + +L+V ++D+ DF+GS + I G NPI+LV K+D+
Sbjct: 68 -----LTDDDFRRLLDQIGSTNSLVVYVMDVFDFSGSLIPGIHRFVGKNPILLVGNKIDV 122
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + + DW+ + L + + LTS ++ + + I+K ++GRDVY++G
Sbjct: 123 LPKSLRRSKIKDWMRQQANIAGLRPIDIALTSGRTGDDLPALMDLIEKYREGRDVYVVGV 182
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS IN ++K + G+++ S PGTTL I+I + DTP
Sbjct: 183 TNVGKSTMINQIIKDVTGDQNDVITT--------SRFPGTTLDRIEI-PLDDDSAIIDTP 233
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ + A + +DL + PQ L+ +++ + E T+F G L R
Sbjct: 234 GIIHQDQMAHYLSPKDLKYVTPQKELKPRTYQLNPEQ--------------TLFMGALAR 279
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D ++ + T Y +L ++ +KA++FY K G L PP + A D
Sbjct: 280 FDYVQG-AKGGFTAYFDNNLMIHRTKLEKAEDFYAKHAGELLAPPSAEHLA------DLP 332
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
L +F+ T++ +D+ I GLGWI+V
Sbjct: 333 PLQRHEFKTTQK--TDIVIDGLGWITV 357
>gi|257883040|ref|ZP_05662693.1| GTP-binding protein YqeH [Enterococcus faecium 1,231,502]
gi|294621391|ref|ZP_06700563.1| nitric-oxide synthase [Enterococcus faecium U0317]
gi|424802804|ref|ZP_18228264.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium S447]
gi|424856100|ref|ZP_18280363.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium R499]
gi|424949331|ref|ZP_18365015.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium R496]
gi|424957745|ref|ZP_18372453.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium R446]
gi|424962572|ref|ZP_18376901.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium P1986]
gi|424967486|ref|ZP_18381182.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium P1140]
gi|424997646|ref|ZP_18409392.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium ERV165]
gi|425002928|ref|ZP_18414329.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium ERV161]
gi|425003344|ref|ZP_18414719.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium ERV102]
gi|425010809|ref|ZP_18421741.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E422]
gi|425017430|ref|ZP_18427934.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium C621]
gi|425033754|ref|ZP_18438701.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium 515]
gi|431777226|ref|ZP_19565481.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E2560]
gi|431783316|ref|ZP_19571434.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E6012]
gi|431785164|ref|ZP_19573195.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E6045]
gi|257818698|gb|EEV46026.1| GTP-binding protein YqeH [Enterococcus faecium 1,231,502]
gi|291599038|gb|EFF30083.1| nitric-oxide synthase [Enterococcus faecium U0317]
gi|402919187|gb|EJX39812.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium S447]
gi|402930526|gb|EJX50173.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium R499]
gi|402934665|gb|EJX53986.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium R496]
gi|402940056|gb|EJX58914.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium P1986]
gi|402942813|gb|EJX61369.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium R446]
gi|402954340|gb|EJX71973.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium P1140]
gi|402981963|gb|EJX97464.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium ERV161]
gi|402985706|gb|EJY00893.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium ERV165]
gi|402992292|gb|EJY07009.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium ERV102]
gi|402998745|gb|EJY12988.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E422]
gi|403004336|gb|EJY18151.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium C621]
gi|403008623|gb|EJY22118.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium 515]
gi|430639710|gb|ELB75576.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E2560]
gi|430645517|gb|ELB81031.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E6012]
gi|430648061|gb|ELB83486.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E6045]
Length = 369
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 121/387 (31%), Positives = 181/387 (46%), Gaps = 46/387 (11%)
Query: 100 SCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGY 159
C GCGA +QT++ GY E K V C RC L H + V
Sbjct: 6 QCIGCGAVIQTNKPGELGYTPQTALE---KGLASGEVYCQRCFRLRHYNETQDVS----- 57
Query: 160 AGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVD 219
++ D+ L+ L ++ ALIV +VDI DFNGS + + G NP++LV KVD
Sbjct: 58 ------LTDDDFLRLLNELGQKDALIVNVVDIFDFNGSLIPGLHRFVGDNPVLLVGNKVD 111
Query: 220 LLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILG 279
+LPK + W+ E + + + V LTS+K + + +I++ + GRDVYI+G
Sbjct: 112 ILPKSLKKTKLTQWMKERAYEAGIRPVDVLLTSAKKSHEMTELLEKIEEYRDGRDVYIVG 171
Query: 280 SANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS IN ++K +Q PGTTL I+I G L DTP
Sbjct: 172 VTNVGKSTLINQIIKNTAGVQDVITTSQ--------FPGTTLDKIEI-PLDDGHFLIDTP 222
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + +DL +AP ++ + + + NE G T+F GGL R
Sbjct: 223 GIIHRHQMAHYLGKKDLRIIAPLKEIKPKVYQL-------NE-------GQTLFLGGLAR 268
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + Y + ++ +KADEFYQK +G L PP + E + L
Sbjct: 269 FDFISG-NRASFIAYVSNDVNIHRTKLEKADEFYQKHVGGLLQPP-RPDEVEAFPEL--- 323
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
++FE + + +D+ +GLGWI+V
Sbjct: 324 ----VRFEFSVKEKTDIVFAGLGWITV 346
>gi|424993575|ref|ZP_18405561.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium ERV168]
gi|402982222|gb|EJX97701.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium ERV168]
Length = 369
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 121/387 (31%), Positives = 181/387 (46%), Gaps = 46/387 (11%)
Query: 100 SCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGY 159
C GCGA +QT++ GY E K V C RC L H + V
Sbjct: 6 QCIGCGAVIQTNKPGELGYTPQTALE---KGLASGEVYCQRCFRLRHYNETQDVS----- 57
Query: 160 AGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVD 219
++ D+ L+ L ++ ALIV +VDI DFNGS + + G NP++LV KVD
Sbjct: 58 ------LTDDDFLRLLNELGQKDALIVNVVDIFDFNGSLIPGLHRFVGDNPVLLVGNKVD 111
Query: 220 LLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILG 279
+LPK + W+ E + + + V LTS+K + + +I++ + GRDVYI+G
Sbjct: 112 ILPKSLKKTKLTQWMKERAYEAGIRPVDVLLTSAKKSHEMTELLEKIEEYRDGRDVYIVG 171
Query: 280 SANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS IN ++K +Q PGTTL I+I G L DTP
Sbjct: 172 VTNVGKSTLINQIIKNTAGVQDVITTSQ--------FPGTTLDKIEI-PLDDGHFLIDTP 222
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + +DL +AP ++ + + + NE G T+F GGL R
Sbjct: 223 GIIHRHQMAHYLGKKDLRIIAPLKEIKPKVYQL-------NE-------GQTLFLGGLAR 268
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + Y + ++ +KADEFYQK +G L PP + E + L
Sbjct: 269 FDFISG-NRASFIAYVSNDVNIHRTKLEKADEFYQKHVGGLLQPP-RPDEVEAFPEL--- 323
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
++FE + + +D+ +GLGWI+V
Sbjct: 324 ----VRFEFSVKEKTDIVFAGLGWITV 346
>gi|223932251|ref|ZP_03624255.1| Nitric-oxide synthase [Streptococcus suis 89/1591]
gi|223899232|gb|EEF65589.1| Nitric-oxide synthase [Streptococcus suis 89/1591]
Length = 368
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 118/387 (30%), Positives = 185/387 (47%), Gaps = 48/387 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT + G+ E K + + C RC L H + I+ V
Sbjct: 6 CIGCGAQIQTLDKAVAGFTPQSALE---KGLETGQLYCQRCFRLRHYNEISDVN------ 56
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
+S D+ + L + AL+V ++DI DFNGS + + N ++LV K D+
Sbjct: 57 -----ISDDDFLKLLHSVGESDALVVNVIDIFDFNGSVIPGLPRFISGNDVLLVGNKQDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK V W+ E + + + V LTS+++ I + +I++ +KGRDVY++G
Sbjct: 112 LPKSVKTGKVTQWLTERAHEIGMRPVDVVLTSAQNKQAIKDLIEKIEQHRKGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G++D S PGTTL I+I G +YDTP
Sbjct: 172 TNVGKSTLINAIIQEITGDKDVITT---------SRFPGTTLDKIEI-PLDDGSYIYDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + A++L ++P+ ++ +++ + E T+F GL R
Sbjct: 222 GIIHRHQMAHYLTAKNLKYISPRKEIKPKTYQLNPEQ--------------TLFLAGLGR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + F+ LQ++ A EFYQK G L PPI K+ E
Sbjct: 268 FDFVAGERQGFTAFFD-NELQLHRTKLQGASEFYQKHAGSLLVPPISKELKE------FP 320
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
L+ +F E+ +DV SGLGWI V
Sbjct: 321 ELVRHEFTINEK--TDVVFSGLGWIRV 345
>gi|422419093|ref|ZP_16496048.1| ribosome biogenesis GTPase YqeH [Listeria seeligeri FSL N1-067]
gi|313633186|gb|EFS00066.1| ribosome biogenesis GTPase YqeH [Listeria seeligeri FSL N1-067]
Length = 366
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 117/386 (30%), Positives = 184/386 (47%), Gaps = 50/386 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT + D GY K + V+C RC L H + I V
Sbjct: 7 CIGCGAIIQTEDPDKIGYA-------PKSSLNNEQVICKRCFRLKHYNEIQDVA------ 53
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ L+ + ++ALIV +VDI DF+GS+L + AG NP++LV K D+
Sbjct: 54 -----LTDDDFLRILNQISTKQALIVYVVDIFDFDGSWLPGLPRFAGNNPVLLVGNKEDV 108
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + + W+ ++ L+ V L S++ G + +I++ + G+DVY++G
Sbjct: 109 LPKSLKRDKLTRWMRTRAKEQGLSATDVVLVSAERGHGFDILLEKIEELRNGQDVYVVGC 168
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS IN ++K+ + +Q PGTTL I+I G L DTPG
Sbjct: 169 TNVGKSTLINRIIKQASGENNVITTSQ--------FPGTTLDKIEI-PLADGNVLVDTPG 219
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ HH+ A + + L A+ P+ ++ F + E T+F G L R+
Sbjct: 220 IINHHQMAHFIDTDTLKAITPKKEVKPAVFQLNEEQ--------------TLFLGALARL 265
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D + L Y +L ++ +KAD Y+K+ G L PP EG K L +
Sbjct: 266 DYVSG-GRKSLVVYVSNNLPIHRTKLEKADALYEKQAGFVLQPP----TEEGMKTL--PK 318
Query: 461 LLEIKFEDTERPASDVAISGLGWISV 486
L+ F E+ +D+ SGLGW+++
Sbjct: 319 LVPYTFNVKEK--ADIVFSGLGWVTI 342
>gi|312868748|ref|ZP_07728940.1| ribosome biogenesis GTPase YqeH [Lactobacillus oris PB013-T2-3]
gi|311095734|gb|EFQ53986.1| ribosome biogenesis GTPase YqeH [Lactobacillus oris PB013-T2-3]
Length = 372
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 122/387 (31%), Positives = 184/387 (47%), Gaps = 48/387 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +Q+++ A GY K+ + C RC L H + I V
Sbjct: 10 CIGCGAVIQSTDPAALGYTPASAV---KRGLANDELYCQRCFRLRHYNEIAPVS------ 60
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ L +R ALIV +VDI DFNGS + + G NP++LV K DL
Sbjct: 61 -----LTDDDFLRLLGQIRDANALIVYVVDIFDFNGSLIPGLHRFVGDNPVLLVGNKEDL 115
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LP+ + DW+ + + + + L S+K I + + I+K + RDVY++G
Sbjct: 116 LPRSLRRPKLCDWIRQQANQAGIRPVDTVLVSAKKNHEIDELLATIEKYRHDRDVYVVGV 175
Query: 281 ANVGKSAFINALLK-KMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS IN ++K + G +D S PGTTL I+I G KL DTP
Sbjct: 176 TNVGKSTLINQIIKQRTGVQDLITT---------SRFPGTTLDEIEI-PLDDGHKLVDTP 225
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A V+ A+DL +APQ ++ +++ + G T+F GG+ R
Sbjct: 226 GIIHPHQMAHVLSAKDLKIVAPQKEIKPRTYQLDP--------------GQTVFIGGVAR 271
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + P + Y +L ++ AD FY+K G LTPP ++ + + L RE
Sbjct: 272 FD-FETGPHSGFVTYFDNNLTLHRTKLSNADSFYEKHRGDLLTPPTAEELND-FPPLVRE 329
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
+F E+ SDV GLGW++V
Sbjct: 330 -----EFHVNEK--SDVVFEGLGWVTV 349
>gi|450089114|ref|ZP_21855043.1| GTP-binding protein YqeH [Streptococcus mutans NV1996]
gi|449215966|gb|EMC16128.1| GTP-binding protein YqeH [Streptococcus mutans NV1996]
Length = 368
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 113/387 (29%), Positives = 193/387 (49%), Gaps = 48/387 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT+ + GY E K + + C RC L H + IT V
Sbjct: 6 CIGCGAQIQTTAKEQAGYTPKSALE---KGLESGKIYCQRCFRLRHYNEITDV------- 55
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
+S D+ + L + +AL+V ++DI DFNGS + ++ ++ ++LV K D+
Sbjct: 56 ----HISDDDFLKLLHEVGNSRALVVNVIDIFDFNGSVIPGLQRFISSSDLLLVGNKADI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W++E ++ L L + LTS+++ I + ++I++ ++GRDVY++G
Sbjct: 112 LPKSVKSGKITQWLMERAHEEGLRPLDLILTSAQNKWAIKELIAKIEELRQGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G+++ S PGTTL I+I G ++DTP
Sbjct: 172 TNVGKSTLINAIIQEITGDKNIITT---------SRFPGTTLDKIEI-PLNDGSYIFDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + + L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLSDKALKYISPKKEIKPKTYQLNPEQ--------------TLFLGGLAR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + T Y +L+++ +AD FY K +G LTPP K+ A K
Sbjct: 268 FDYV-TGDKQGFTAYFDNNLKLHRTKLARADAFYDKHIGSLLTPPDKKEMAAFPK----- 321
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
++ E T + +D+ SGLGWI +
Sbjct: 322 ---LVRHEFTIKEKTDLVFSGLGWIRI 345
>gi|257865892|ref|ZP_05645545.1| GTP-binding protein YqeH [Enterococcus casseliflavus EC30]
gi|257872225|ref|ZP_05651878.1| GTP-binding protein YqeH [Enterococcus casseliflavus EC10]
gi|257799826|gb|EEV28878.1| GTP-binding protein YqeH [Enterococcus casseliflavus EC30]
gi|257806389|gb|EEV35211.1| GTP-binding protein YqeH [Enterococcus casseliflavus EC10]
Length = 372
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 118/386 (30%), Positives = 182/386 (47%), Gaps = 46/386 (11%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT+ + GY E K + V C RC L H + I V
Sbjct: 10 CIGCGAVIQTTNPNELGYTPQSALE---KGLESGEVYCQRCFRLRHYNEIQDVS------ 60
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ L+ + ++ALIV +VDI DFNGS + + G NP++LV KVD+
Sbjct: 61 -----LTDDDFLRLLNEIGEKEALIVNVVDIFDFNGSLIPGLHRFVGNNPVLLVGNKVDI 115
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + + W+ E + L + V LTS+K + I+ ++GRDVY++G
Sbjct: 116 LPKSLKKSKMTQWMKERAHEAGLRPVDVLLTSAKKPGETEALLQAIETYREGRDVYVVGV 175
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS IN ++K+ + S PGTTL I+I G L DTPG
Sbjct: 176 TNVGKSTLINQIIKQTAGINELITT--------SRFPGTTLDKIEI-PLDDGHFLIDTPG 226
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ H+ A + +DL +AP ++ + + + E T+F GGL R
Sbjct: 227 IIHRHQMAHYLGKKDLKIVAPAKEIKPKVYQLNPEQ--------------TLFLGGLARF 272
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D ++ + Y + ++ KADEFY+K +G L PP + A D
Sbjct: 273 DFIQG-ERSSFIAYVANDVAIHRTKLTKADEFYEKHVGGLLQPPRADEVA------DFPE 325
Query: 461 LLEIKFEDTERPASDVAISGLGWISV 486
L ++FE + + +D+ +GLGWI++
Sbjct: 326 L--VRFEFSIKEKTDIVFAGLGWITI 349
>gi|257875519|ref|ZP_05655172.1| GTP-binding protein YqeH [Enterococcus casseliflavus EC20]
gi|257809685|gb|EEV38505.1| GTP-binding protein YqeH [Enterococcus casseliflavus EC20]
Length = 372
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 118/386 (30%), Positives = 182/386 (47%), Gaps = 46/386 (11%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT+ + GY E K + V C RC L H + I V
Sbjct: 10 CIGCGAVIQTTNPNELGYTPQSALE---KGLESGEVYCQRCFRLRHYNEIQDVS------ 60
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ L+ + ++ALIV +VDI DFNGS + + G NP++LV KVD+
Sbjct: 61 -----LTDDDFLRLLNEIGEKEALIVNVVDIFDFNGSLIPGLHRFVGNNPVLLVGNKVDI 115
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + + W+ E + L + V LTS+K + I+ ++GRDVY++G
Sbjct: 116 LPKSLKKSKMTQWMKERAHEAGLRPVDVLLTSAKKPGETEALLQAIETYREGRDVYVVGV 175
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS IN ++K+ + S PGTTL I+I G L DTPG
Sbjct: 176 TNVGKSTLINQIIKQTAGINELITT--------SRFPGTTLDKIEI-PLDDGHFLIDTPG 226
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ H+ A + +DL +AP ++ + + + E T+F GGL R
Sbjct: 227 IIHRHQMAHYLGKKDLKIVAPAKEIKPKVYQLNPEQ--------------TLFLGGLARF 272
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D ++ + Y + ++ KADEFY+K +G L PP + A D
Sbjct: 273 DFIQG-ERSSFIAYVANDVAIHRTKLTKADEFYEKHVGGLLQPPRADEVA------DFPE 325
Query: 461 LLEIKFEDTERPASDVAISGLGWISV 486
L ++FE + + +D+ +GLGWI++
Sbjct: 326 L--VRFEFSIKEKTDIVFAGLGWITI 349
>gi|449976730|ref|ZP_21816343.1| GTP-binding protein YqeH [Streptococcus mutans 11VS1]
gi|449175269|gb|EMB77696.1| GTP-binding protein YqeH [Streptococcus mutans 11VS1]
Length = 368
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 114/387 (29%), Positives = 192/387 (49%), Gaps = 48/387 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT+ + GY E K + + C RC L H + IT V
Sbjct: 6 CIGCGAQIQTTAKEQAGYTPKSALE---KGLESGKIYCQRCFRLRHYNEITDV------- 55
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
+S D+ + L + +AL+V ++DI DFNGS + ++ +N ++LV K D+
Sbjct: 56 ----HISDDDFLKLLHEVGDSRALVVNVIDIFDFNGSVIPGLQRFISSNDLLLVGNKADI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W++E ++ L L + LTS+++ I + ++I++ ++GRDVY++G
Sbjct: 112 LPKSVKSGKITQWLMERAHEEGLRPLDLILTSAQNKWAIKELIAKIEELRQGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G+++ S PGTTL I+I G ++DTP
Sbjct: 172 TNVGKSTLINAIIQEITGDKNIITT---------SRFPGTTLDKIEI-PLNDGSYIFDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + + L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLSDKALKYISPKKEIKPKTYQLNPEQ--------------TLFLGGLAR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + T Y +L+++ AD FY K +G LTPP K+ A K
Sbjct: 268 FDYV-TGDKQGFTAYFDNNLKLHRTKLAGADAFYDKHIGSLLTPPDKKEMAAFPK----- 321
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
++ E T + +D+ SGLGWI +
Sbjct: 322 ---LVRHEFTIKEKTDLVFSGLGWIRI 345
>gi|449919675|ref|ZP_21798074.1| GTP-binding protein YqeH [Streptococcus mutans 1SM1]
gi|449159247|gb|EMB62607.1| GTP-binding protein YqeH [Streptococcus mutans 1SM1]
Length = 368
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 114/387 (29%), Positives = 192/387 (49%), Gaps = 48/387 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT+ + GY E K + + C RC L H + IT V
Sbjct: 6 CIGCGAQIQTTAKEQAGYTPKSALE---KGLESGKIYCQRCFRLRHYNEITDV------- 55
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
+S D+ + L + +AL+V ++DI DFNGS + ++ +N ++LV K D+
Sbjct: 56 ----HISDDDFLKLLHEVGDSRALVVNVIDIFDFNGSVIPGLQRFISSNDLLLVGNKADI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W++E ++ L L + LTS+++ I + ++I++ ++GRDVY++G
Sbjct: 112 LPKSVKSGKITQWLMERAHEEGLRPLDLILTSAQNKWAIKELIAKIEELRQGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G+++ S PGTTL I+I G ++DTP
Sbjct: 172 TNVGKSTLINAIIQEITGDKNIITT---------SRFPGTTLDKIEI-PLNDGSYIFDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + + L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLSDKALKYISPKKEIKPKTYQLNPEQ--------------TLFLGGLAR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + T Y +L+++ AD FY K +G LTPP K+ A K
Sbjct: 268 FDYV-TGDKQGFTAYFDNNLKLHRTKLAGADTFYDKHIGSLLTPPDKKEMAAFPK----- 321
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
++ E T + +D+ SGLGWI +
Sbjct: 322 ---LVRHEFTIKEKTDLVFSGLGWIRI 345
>gi|450125814|ref|ZP_21867843.1| GTP-binding protein YqeH [Streptococcus mutans U2A]
gi|449232058|gb|EMC31197.1| GTP-binding protein YqeH [Streptococcus mutans U2A]
Length = 368
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 113/387 (29%), Positives = 193/387 (49%), Gaps = 48/387 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT+ + GY E K + + C RC L H + IT V
Sbjct: 6 CIGCGAQIQTTAKEQAGYTPKSALE---KGLESGRIYCQRCFRLRHYNEITDV------- 55
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++S D+ + L + +AL+V ++DI DFNGS + ++ ++ ++LV K D+
Sbjct: 56 ----YISDDDFLKLLHEVGDSRALVVNVIDIFDFNGSVIPGLQRFISSSDLLLVGNKADI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W++E ++ L L + LTS+++ I + ++I++ ++GRDVY++G
Sbjct: 112 LPKSVKSGKITQWLMERAHEEGLRPLDLILTSAQNKWAIKELIAKIEELRQGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G+++ S PGTTL I+I G ++DTP
Sbjct: 172 TNVGKSTLINAIIQEITGDKNIITT---------SRFPGTTLDKIEI-PLNDGSYIFDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + + L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLSDKALKYISPKKEIKPKTYQLNPEQ--------------TLFLGGLAR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + T Y +L+++ AD FY K +G LTPP K+ A K
Sbjct: 268 FDYV-TGDQQGFTAYFDNNLKLHRTKLAGADAFYDKHIGSLLTPPDKKEMAAFPK----- 321
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
++ E T + +D+ SGLGWI +
Sbjct: 322 ---LVRHEFTIKEKTDLVFSGLGWIRI 345
>gi|46907719|ref|YP_014108.1| GTP-binding protein YqeH [Listeria monocytogenes serotype 4b str.
F2365]
gi|217964363|ref|YP_002350041.1| GTP-binding protein YqeH [Listeria monocytogenes HCC23]
gi|226224092|ref|YP_002758199.1| hypothetical protein Lm4b_01501b [Listeria monocytogenes serotype
4b str. CLIP 80459]
gi|254931426|ref|ZP_05264785.1| GTP-binding protein YqeH [Listeria monocytogenes HPB2262]
gi|290893851|ref|ZP_06556829.1| GTP-binding protein YqeH [Listeria monocytogenes FSL J2-071]
gi|386008262|ref|YP_005926540.1| GTPase, putative [Listeria monocytogenes L99]
gi|386026863|ref|YP_005947639.1| putative ribosome biogenesis GTP-binding protein [Listeria
monocytogenes M7]
gi|386732230|ref|YP_006205726.1| GTPase YqeH [Listeria monocytogenes 07PF0776]
gi|404407929|ref|YP_006690644.1| GTPase [Listeria monocytogenes SLCC2376]
gi|405749835|ref|YP_006673301.1| GTPase [Listeria monocytogenes ATCC 19117]
gi|405752711|ref|YP_006676176.1| GTPase [Listeria monocytogenes SLCC2378]
gi|405755649|ref|YP_006679113.1| GTPase [Listeria monocytogenes SLCC2540]
gi|406704264|ref|YP_006754618.1| GTPase, putative [Listeria monocytogenes L312]
gi|417316034|ref|ZP_12102692.1| GTPase YqeH [Listeria monocytogenes J1816]
gi|417317609|ref|ZP_12104221.1| GTPase YqeH [Listeria monocytogenes J1-220]
gi|424823253|ref|ZP_18248266.1| GTP-binding protein [Listeria monocytogenes str. Scott A]
gi|46880988|gb|AAT04285.1| putative GTPase [Listeria monocytogenes serotype 4b str. F2365]
gi|217333633|gb|ACK39427.1| GTPase family protein [Listeria monocytogenes HCC23]
gi|225876554|emb|CAS05263.1| Hypothetical protein of unknown function [Listeria monocytogenes
serotype 4b str. CLIP 80459]
gi|290556568|gb|EFD90104.1| GTP-binding protein YqeH [Listeria monocytogenes FSL J2-071]
gi|293582976|gb|EFF95008.1| GTP-binding protein YqeH [Listeria monocytogenes HPB2262]
gi|307571072|emb|CAR84251.1| GTPase, putative [Listeria monocytogenes L99]
gi|328465531|gb|EGF36760.1| GTPase YqeH [Listeria monocytogenes J1816]
gi|328474857|gb|EGF45657.1| GTPase YqeH [Listeria monocytogenes J1-220]
gi|332311933|gb|EGJ25028.1| GTP-binding protein [Listeria monocytogenes str. Scott A]
gi|336023444|gb|AEH92581.1| putative ribosome biogenesis GTP-binding protein [Listeria
monocytogenes M7]
gi|384390988|gb|AFH80058.1| GTPase YqeH [Listeria monocytogenes 07PF0776]
gi|404219035|emb|CBY70399.1| GTPase, putative [Listeria monocytogenes ATCC 19117]
gi|404221911|emb|CBY73274.1| putative GTPase [Listeria monocytogenes SLCC2378]
gi|404224849|emb|CBY76211.1| putative GTPase [Listeria monocytogenes SLCC2540]
gi|404242078|emb|CBY63478.1| putative GTPase [Listeria monocytogenes SLCC2376]
gi|406361294|emb|CBY67567.1| GTPase, putative [Listeria monocytogenes L312]
Length = 366
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 116/386 (30%), Positives = 184/386 (47%), Gaps = 50/386 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT + D GY K + V+C RC L H + I V
Sbjct: 7 CIGCGAVIQTEDPDKIGYA-------PKSSLNNEQVICKRCFRLKHYNEIQDVA------ 53
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ L+ + ++ALIV +VDI DF+GS+L + AG+NP++LV K D+
Sbjct: 54 -----LTDDDFLRILNQISSKQALIVYVVDIFDFDGSWLPGLPRFAGSNPVLLVGNKEDV 108
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + + W+ ++ L V L S++ G + +I++ + G+DVY++G
Sbjct: 109 LPKSLKRDKLTRWMRTRAKEQGLAATDVVLVSAEKGHGFDTLLEKIEELRNGQDVYVVGC 168
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS IN ++K+ + +Q PGTTL I+I G L DTPG
Sbjct: 169 TNVGKSTLINRIIKQASGENNVITTSQ--------FPGTTLDKIEI-PLADGNVLVDTPG 219
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ HH+ A + L A+ P+ ++ F + E T+F G L R+
Sbjct: 220 IINHHQMAHFIDTTTLKAITPKKEVKPAVFQLNEEQ--------------TLFLGALARL 265
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D + L Y +L ++ +KAD Y+K+ G+ L PP EG + L +
Sbjct: 266 DYVSG-GRKSLVVYVSNNLPIHRTKLEKADALYEKQAGIVLQPP----TEEGMETL--PK 318
Query: 461 LLEIKFEDTERPASDVAISGLGWISV 486
L+ F E+ +D+ SGLGW+++
Sbjct: 319 LVPYSFTIKEK--ADIVFSGLGWVTI 342
>gi|256850837|ref|ZP_05556226.1| ribosome biogenesis GTPase YqeH [Lactobacillus jensenii 27-2-CHN]
gi|260661048|ref|ZP_05861962.1| ribosome biogenesis GTPase YqeH [Lactobacillus jensenii 115-3-CHN]
gi|297205711|ref|ZP_06923106.1| ribosome biogenesis GTPase YqeH [Lactobacillus jensenii JV-V16]
gi|256615899|gb|EEU21087.1| ribosome biogenesis GTPase YqeH [Lactobacillus jensenii 27-2-CHN]
gi|260547985|gb|EEX23961.1| ribosome biogenesis GTPase YqeH [Lactobacillus jensenii 115-3-CHN]
gi|297148837|gb|EFH29135.1| ribosome biogenesis GTPase YqeH [Lactobacillus jensenii JV-V16]
Length = 369
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 120/388 (30%), Positives = 184/388 (47%), Gaps = 50/388 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA LQ+ + + G++ P + K + + V C RC L H I V N
Sbjct: 7 CIGCGAVLQSQDENEAGFL-PASALNKALEGENQEVYCKRCFRLRHYSEIMPVELNN--- 62
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
D+ L+ L +KALIV +VD+ DFN S + ++ G N ILV KVDL
Sbjct: 63 --------DDFLRLLNSLGDKKALIVNVVDLFDFNNSLIPSLKRFVGNNDFILVGNKVDL 114
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
P + + + DW+ + + L + L S+ + + + + + + +DVY +G+
Sbjct: 115 FPLNSKESKIKDWMRQEANRMGLYPKDIFLISAAKKRNLQDLIAYLDRASQNQDVYFVGT 174
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS IN+++ MG+ K S PGTTL I+I G L DTPG
Sbjct: 175 TNVGKSTLINSIIDLMGD--------VKDLITTSRFPGTTLDQIKI-PLDSGHYLVDTPG 225
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ + A+ ++++DL +AP+ L+ ++ + S G T+F GGL RI
Sbjct: 226 IMTDKQLASYLNSKDLDLIAPKKPLKPATYQLNS--------------GQTLFLGGLGRI 271
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D + +T T Y + L V+ T+ ADEFY+K +G LTPP G + KG
Sbjct: 272 DFVSG-EKTSFTVYTARGLYVHRTKTENADEFYEKHVGDLLTPPHGDENLPAMKG----- 325
Query: 461 LLEIKFEDTERPA--SDVAISGLGWISV 486
T P SD+ G+G+I+V
Sbjct: 326 -------QTYHPTTKSDLLFGGIGFITV 346
>gi|430821234|ref|ZP_19439846.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E0045]
gi|430438671|gb|ELA49082.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E0045]
Length = 369
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 121/387 (31%), Positives = 181/387 (46%), Gaps = 46/387 (11%)
Query: 100 SCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGY 159
C GCGA +QT++ GY E K V C RC L H + I V
Sbjct: 6 QCIGCGAVIQTNKPGELGYTPQTALE---KGLASGEVYCQRCFRLRHYNEIQDVS----- 57
Query: 160 AGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVD 219
++ D+ L+ L ++ ALIV +VDI DFNGS + + G NP++LV KVD
Sbjct: 58 ------LTDDDFLRLLNELGQKDALIVNVVDIFDFNGSLIPGLHRFVGDNPVLLVGNKVD 111
Query: 220 LLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILG 279
+LPK + W+ E + + + V L S+K + + +I++ + GRDVYI+G
Sbjct: 112 ILPKSLKKTKLTQWMKERAYEAGIRPVDVLLISAKKSHEMTELLEKIEEYRDGRDVYIVG 171
Query: 280 SANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS IN ++K +Q PGTTL I+I G L DTP
Sbjct: 172 VTNVGKSTLINQIIKNTAGVQDVITTSQ--------FPGTTLDKIEI-PLDDGHFLIDTP 222
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + +DL +AP ++ + + + NE G T+F GGL R
Sbjct: 223 GIIHRHQMAHYLGKKDLRIIAPLKEIKPKVYQL-------NE-------GQTLFLGGLAR 268
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + Y + ++ +KADEFYQK +G L PP + E + L
Sbjct: 269 FDFISG-NRASFIAYVSNDVNIHRTKLEKADEFYQKHVGGLLQPP-RPNEVEEFPEL--- 323
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
++FE + + +D+ +GLGWI+V
Sbjct: 324 ----VRFEFSVKEKTDIVFAGLGWITV 346
>gi|422809570|ref|ZP_16857981.1| GTP-binding protein YqeH, required for biogenesis of 30S ribosome
subunit [Listeria monocytogenes FSL J1-208]
gi|378753184|gb|EHY63769.1| GTP-binding protein YqeH, required for biogenesis of 30S ribosome
subunit [Listeria monocytogenes FSL J1-208]
Length = 366
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 116/386 (30%), Positives = 184/386 (47%), Gaps = 50/386 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT + D GY K + V+C RC L H + I V
Sbjct: 7 CIGCGAIIQTEDPDKIGYA-------PKSSLNNEQVICKRCFRLKHYNEIQDVA------ 53
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ L+ + ++ALIV +VDI DF+GS+L + AG+NP++LV K D+
Sbjct: 54 -----LTDDDFLRILNQISSKQALIVYVVDIFDFDGSWLPGLPRFAGSNPVLLVGNKEDV 108
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + + W+ ++ L V L S++ G + +I++ + G+DVY++G
Sbjct: 109 LPKSLKRDKLTRWMRTRAKEQGLAATDVVLVSAEKGHGFDTLLEKIEELRNGQDVYVVGC 168
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS IN ++K+ + +Q PGTTL I+I G L DTPG
Sbjct: 169 TNVGKSTLINRIIKQASGENNVITTSQ--------FPGTTLDKIEI-PLADGNVLVDTPG 219
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ HH+ A + L A+ P+ ++ F + E T+F G L R+
Sbjct: 220 IINHHQMAHFIDTTTLKAITPKKEVKPAVFQLNEEQ--------------TLFLGALARL 265
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D + L Y +L ++ +KAD Y+K+ G+ L PP EG + L +
Sbjct: 266 DYVSG-GRKSLVVYVSNNLPIHRTKLEKADALYEKQAGIVLQPP----TEEGMETL--PK 318
Query: 461 LLEIKFEDTERPASDVAISGLGWISV 486
L+ F E+ +D+ SGLGW+++
Sbjct: 319 LVPYSFTIKEK--ADIVFSGLGWVTI 342
>gi|423071276|ref|ZP_17060051.1| ribosome biogenesis GTPase YqeH [Streptococcus intermedius F0413]
gi|355364638|gb|EHG12370.1| ribosome biogenesis GTPase YqeH [Streptococcus intermedius F0413]
Length = 368
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 123/387 (31%), Positives = 185/387 (47%), Gaps = 48/387 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGAP+QT D GY E K + + C RC L H + IT V
Sbjct: 6 CIGCGAPIQTKHKDKMGYTPQSALE---KGLETGELYCQRCFRLRHYNEITDV------- 55
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
Q D LR L + AL+V +VDI DFNGS + + N ++LV K D+
Sbjct: 56 ---QLTDDDFLR-LLHEVGDSNALVVNVVDIFDFNGSVIPGLPRFVTGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + V W+ E ++ L + V LTS+++ I + +I++ +KGRDVY++G
Sbjct: 112 LPKSVKTSKVTQWLTERAHEEGLRPIDVVLTSAQNKQAIKELMEKIEQYRKGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G++D S PGTTL I+I G +YDTP
Sbjct: 172 TNVGKSTLINAIIQEITGDKDIITT---------SRFPGTTLDKIEI-PLDDGSHIYDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ ++ A + A+ L ++P+ ++ +++ + + T+F GGL R
Sbjct: 222 GIIHRYQMAHYLSAKHLKYVSPKKEIKPKTYQLNPKQ--------------TLFLGGLGR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + T Y L+++ A EFY K +G LTPP ++ K + E
Sbjct: 268 FDFVSG-DKQGFTAYFDNELKLHRTKLAGAGEFYNKHVGSLLTPPSKQELPTFPKLVKHE 326
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
+E K DV SGLGWI V
Sbjct: 327 LKIETKI--------DVVFSGLGWIRV 345
>gi|419783378|ref|ZP_14309166.1| ribosome biogenesis GTPase YqeH [Streptococcus oralis SK610]
gi|383182262|gb|EIC74820.1| ribosome biogenesis GTPase YqeH [Streptococcus oralis SK610]
Length = 368
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 118/387 (30%), Positives = 190/387 (49%), Gaps = 48/387 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT++ G+ E K + V C RC L H + IT V
Sbjct: 6 CIGCGATIQTTDKAGLGFTPQSALE---KGLETGEVYCQRCFRLRHYNEITDVQ------ 56
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ + L + AL+V ++DI DFNGS + + N ++LV K D+
Sbjct: 57 -----LTDDDFLKLLHEVGDSDALVVNVIDIFDFNGSVIPGLPRFVSGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W++E ++ L + V LTS+++ I V +I+ +KGRDVY++G
Sbjct: 112 LPKSVKPGKISQWLMERAHEEGLRPVDVVLTSAQNKHAIKEVIDKIEHYRKGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G+++ S PGTTL I+I G +YDTP
Sbjct: 172 TNVGKSTLINAIIQEITGDQNVITT---------SRFPGTTLDKIEI-PLDDGSYIYDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + A++L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLTAKNLKYVSPKKEIKPKTYQLNPEQ--------------TLFLGGLGR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + F+ L+++ + A FY K LG LTPP K+K D
Sbjct: 268 FDFISGEKQGFTAFF-DNELKLHRTKLEGASAFYDKHLGTLLTPPNSKEKE------DFP 320
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
+L++ F + +D+ ISGLGWI V
Sbjct: 321 KLVQHVF--IIKDKTDLVISGLGWIRV 345
>gi|389856062|ref|YP_006358305.1| GTP-binding protein YqeH [Streptococcus suis ST1]
gi|353739780|gb|AER20787.1| GTP-binding protein YqeH [Streptococcus suis ST1]
Length = 368
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 117/387 (30%), Positives = 185/387 (47%), Gaps = 48/387 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT++ G+ E K + + C RC L H + I+ V
Sbjct: 6 CIGCGAQIQTTDKAVAGFTPQSALE---KGLETGQLYCQRCFRLRHYNEISDVN------ 56
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
+S D+ + L + AL+V ++DI DFNGS + + N ++LV K D+
Sbjct: 57 -----ISDDDFLKLLHSVGESDALVVNVIDIFDFNGSVIPGLPRFISGNDVLLVGNKQDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK V W+ E + + + V LTS+++ I + +I++ +KGRDVY++G
Sbjct: 112 LPKSVKTGKVTQWLTERAHEIGMRPVDVVLTSAQNKQAIKDLIEKIEQHRKGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G++D S PGTTL I+I G +YDTP
Sbjct: 172 TNVGKSTLINAIIQEITGDKDVITT---------SRFPGTTLDKIEI-PLDDGSYIYDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + A++L ++P+ ++ +++ + E T+F GL R
Sbjct: 222 GIIHRHQMAHYLTAKNLKYISPRKEIKPKTYQLNPEQ--------------TLFLAGLGR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + F+ LQ++ A EFYQK G L PP K+ E
Sbjct: 268 FDFVAGERQGFTAFFD-NELQLHRTKLQGASEFYQKHAGSLLVPPTSKELKE------FP 320
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
L+ +F E+ +DV SGLGWI V
Sbjct: 321 ELVRHEFTINEK--TDVVFSGLGWIRV 345
>gi|329925908|ref|ZP_08280618.1| ribosome biogenesis GTPase YqeH [Paenibacillus sp. HGF5]
gi|328939559|gb|EGG35908.1| ribosome biogenesis GTPase YqeH [Paenibacillus sp. HGF5]
Length = 375
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 126/425 (29%), Positives = 197/425 (46%), Gaps = 63/425 (14%)
Query: 98 VASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNG 157
+ C GCG LQ++ D PGY L +K V+C RC + + + ++V
Sbjct: 10 IKKCSGCGIQLQSAAQDKPGY-------LPEKAWDRDPVICQRCFRIKNYNEASSVA--- 59
Query: 158 GYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTK 217
V DE L + + AL++ +VD+ DF GS ++ ++ G NP+IL V K
Sbjct: 60 --------VDQDEFLRLLGQIGGKNALVIHIVDLFDFEGSLISGLQRFVGNNPVILAVNK 111
Query: 218 VDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYI 277
DLLPK T++N V +WV + + L + L S+K G + + + RDVY+
Sbjct: 112 TDLLPKVTNWNKVLNWVQKQCKEHGLRTEEIVLCSAKKNQGFERLLETVAHYRGDRDVYV 171
Query: 278 LGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYD 337
+G+ NVGKS+ IN L++ + D + S PGTTL + I G + D
Sbjct: 172 VGATNVGKSSLINRLIRDYSDLDQELTV--------SRYPGTTLDMVNI-PLDDGRYIID 222
Query: 338 TPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGL 397
TPG+ R + +V EDL + P++ L+ + + NE G T+F+GG
Sbjct: 223 TPGIVYPWRYSELVSREDLGTVMPENPLKPMVYQL-------NE-------GQTLFFGGF 268
Query: 398 VRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLD 457
R D L+ ++ F + L ++ ++AD + + G L+PP K++ E
Sbjct: 269 ARFDFLQGEHQSFTCFISGR-LGIHRTKLERADSLFAEHAGELLSPPT-KERLEELPEWT 326
Query: 458 RERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPV 517
R EI+ R DV ISG+GWI + G L +AVHVPK +
Sbjct: 327 RH---EIRIPKGAR--QDVFISGIGWIKI--------------NGEHGAL-VAVHVPKGI 366
Query: 518 EVFVR 522
+V R
Sbjct: 367 KVLSR 371
>gi|62719448|gb|AAX93324.1| GTPase [Lactobacillus sanfranciscensis]
Length = 377
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 125/386 (32%), Positives = 182/386 (47%), Gaps = 48/386 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +Q ++ D GY E K + + C RC L H + I V
Sbjct: 17 CIGCGALIQDTDKDKAGYTPKSAIE---KGLESGELYCQRCFRLRHYNEIQPVD------ 67
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
VS DE L + +L+V +VDI D NGS + I+ G NPI++V KVDL
Sbjct: 68 -----VSDDEFLHLLGKIGDTDSLVVYVVDIFDVNGSIIPGIQRFVGNNPILVVGNKVDL 122
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LP + + DW+ + K + + + L S+K+ + + I+K +K RDVY++G
Sbjct: 123 LPSSFKESKIKDWLRQMMNKAGIKPIDIELVSAKTNRSVDDLLEVIKKYQKNRDVYVVGV 182
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS IN ++ + A Q+ S PGTTL I+I G L DTPG
Sbjct: 183 TNVGKSTLINQIIHQ--------ASGQEQVITTSKFPGTTLDMIKI-PLDDGHDLIDTPG 233
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
V + A + +DL ++PQ R++ + + + +G T+F G + R
Sbjct: 234 VIHASQMAHYLSPKDLKYVSPQKRIKPKVYQL--------------NDGQTLFLGAIGRF 279
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D +K P+T T +L ++ T+ ADEF G L P+GK E L R
Sbjct: 280 DYVKG-PKTGFTVNVDNNLMIHRTKTENADEFLINMPGEXLNXPLGK---ENVVPLQRH- 334
Query: 461 LLEIKFEDTERPASDVAISGLGWISV 486
E K EDT SD+ I GLGW++V
Sbjct: 335 --EFKVEDT----SDLVIEGLGWVTV 354
>gi|16800594|ref|NP_470862.1| GTP-binding protein YqeH [Listeria innocua Clip11262]
gi|422412980|ref|ZP_16489939.1| ribosome biogenesis GTPase YqeH [Listeria innocua FSL S4-378]
gi|423100573|ref|ZP_17088280.1| ribosome biogenesis GTPase YqeH [Listeria innocua ATCC 33091]
gi|16413999|emb|CAC96757.1| lin1526 [Listeria innocua Clip11262]
gi|313618857|gb|EFR90732.1| ribosome biogenesis GTPase YqeH [Listeria innocua FSL S4-378]
gi|370792797|gb|EHN60640.1| ribosome biogenesis GTPase YqeH [Listeria innocua ATCC 33091]
Length = 366
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 117/386 (30%), Positives = 183/386 (47%), Gaps = 50/386 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT + D GY K + V+C RC L H + I V
Sbjct: 7 CIGCGAIIQTEDPDKIGYA-------PKSSLNNEQVICKRCFRLKHYNEIQDVA------ 53
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ L+ + ++ALIV +VDI DF+GS+L + AG+NP++LV K D+
Sbjct: 54 -----LTDDDFLRILNQISSKQALIVYVVDIFDFDGSWLPGLPRFAGSNPVLLVGNKEDV 108
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + + W+ ++ L V L S++ G + +I++ + G+DVY++G
Sbjct: 109 LPKSLKRDKLTRWMRTRAKEQGLAATDVVLVSAEKGHGFDTLLEKIEELRNGQDVYVVGC 168
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS IN ++K+ + +Q PGTTL I+I G L DTPG
Sbjct: 169 TNVGKSTLINRIIKQASGENNVITTSQ--------FPGTTLDKIEI-PLADGNVLVDTPG 219
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ HH+ A + L A+ P+ ++ F + E T+F G L R+
Sbjct: 220 IINHHQMAHFIDTTTLKAITPKKEVKPAVFQLNEEQ--------------TLFLGALARL 265
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D + L Y +L ++ +KAD Y+K+ G L PP EG K L +
Sbjct: 266 DYVSG-GRKSLVVYVSNNLPIHRTKLEKADALYEKQAGFVLQPP----TEEGMKTL--PK 318
Query: 461 LLEIKFEDTERPASDVAISGLGWISV 486
L+ F T + +D+ SGLGW+++
Sbjct: 319 LVPYTF--TVKDKADIVFSGLGWVTI 342
>gi|240104509|pdb|3H2Y|A Chain A, Crystal Structure Of Yqeh Gtpase From Bacillus Anthracis
With Dgdp Bound
Length = 368
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 123/426 (28%), Positives = 188/426 (44%), Gaps = 66/426 (15%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG +QT + + GY + E ++ V+C RC L H + I V
Sbjct: 7 CIGCGVEIQTEDKNEVGYAPASSLEKEQ-------VICQRCFRLKHYNEIQDVS------ 53
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ L+ + + AL+VK+VDI DFNGS+L + G N ++LV K DL
Sbjct: 54 -----LTDDDFLRILNGIGKSDALVVKIVDIFDFNGSWLPGLHRFVGNNKVLLVGNKADL 108
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
+PK + V W + + L V L S+ GI +A I+ + G+DVY++G
Sbjct: 109 IPKSVKHDKVKHWXRYSAKQLGLKPEDVFLISAAKGQGIAELADAIEYYRGGKDVYVVGC 168
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS FIN +K+ + + PGTTL I I LYDTPG
Sbjct: 169 TNVGKSTFINRXIKEFSDETENVITTSHF-------PGTTLDLIDI-PLDEESSLYDTPG 220
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ HH+ A V + L + P ++ F + E T+F+ GL R
Sbjct: 221 IINHHQXAHYVGKQSLKLITPTKEIKPXVFQLNEEQ--------------TLFFSGLARF 266
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D + T + L ++ +KADE Y+ G L+PP ++ +
Sbjct: 267 DYVSG-GRRAFTCHFSNRLTIHRTKLEKADELYKNHAGDLLSPPTPEELE------NXPE 319
Query: 461 LLEIKFEDTERPASDVAISGLGWISV-EPVRRSIRNSDINLESTSGELHLAVHVPKPVEV 519
L++ +F + P +DV SGLGW++V EP + + HVPK V V
Sbjct: 320 LVKYEF-NIREPKTDVVFSGLGWVTVNEPGAK-----------------IVAHVPKGVSV 361
Query: 520 FVRNPM 525
+R +
Sbjct: 362 SLRKSL 367
>gi|414083274|ref|YP_006991982.1| ribosome biogenesis GTPase YqeH [Carnobacterium maltaromaticum
LMA28]
gi|412996858|emb|CCO10667.1| ribosome biogenesis GTPase YqeH [Carnobacterium maltaromaticum
LMA28]
Length = 377
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 126/389 (32%), Positives = 188/389 (48%), Gaps = 47/389 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT+ APG + +K + V C RC L H + I V
Sbjct: 14 CIGCGAVIQTN---APGELGYTPVSALEKGLENGEVYCQRCFRLRHYNEIQDV------- 63
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
Q D LR L+ + E ALIV ++DI DFNGS + + G NP++LV KVDL
Sbjct: 64 ---QLTDDDFLR-LLNEIGAEDALIVNVIDIFDFNGSLIPGLHRFVGNNPVLLVGNKVDL 119
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LP + W+ E ++ L V LTS+ + + I+K ++GRDV+++G
Sbjct: 120 LPHSLKRGKMTQWLRERAHEEGLRPKDVILTSAMKPKEMDDLLKTIEKYREGRDVFVVGV 179
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS IN ++K A +A S PGTTL I+I G L DTPG
Sbjct: 180 TNVGKSTLINQIIKN------TAGVADVI--TTSQFPGTTLDRIEI-PLDDGKSLIDTPG 230
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ H+ A V+ +DL +AP+ ++ + + NE G T+F+GG+ R
Sbjct: 231 IIHRHQMAHVLGDKDLKLIAPKKEIKPMVYQL-------NE-------GQTLFFGGVARF 276
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D ++ T Y L+++ +KADE Y +G L PP K + + + L
Sbjct: 277 DYIQG-GRRSFTCYTSNDLKIHRTKLEKADELYANHVGEMLQPP-RKDEVDNFPEL---- 330
Query: 461 LLEIKFEDTERPASDVAISGLGWISV-EP 488
++FE + + SD+ +GLGW++V EP
Sbjct: 331 ---VRFEFSVKERSDIVFAGLGWVTVNEP 356
>gi|223044373|ref|ZP_03614407.1| ribosome biogenesis GTPase YqeH [Staphylococcus capitis SK14]
gi|417907787|ref|ZP_12551554.1| ribosome biogenesis GTPase YqeH [Staphylococcus capitis VCU116]
gi|222442242|gb|EEE48353.1| ribosome biogenesis GTPase YqeH [Staphylococcus capitis SK14]
gi|341594874|gb|EGS37552.1| ribosome biogenesis GTPase YqeH [Staphylococcus capitis VCU116]
Length = 366
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 128/432 (29%), Positives = 206/432 (47%), Gaps = 70/432 (16%)
Query: 96 SAVASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFK-TVLCGRCRLLSHGHMITAVG 154
S + C GCGAPLQ+ + +APGYV +H+ F+ V+C RC L + + + VG
Sbjct: 2 SELLKCIGCGAPLQSEDKNAPGYV--------PEHNMFREDVICQRCFRLKNYNEVQDVG 53
Query: 155 GNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILV 214
+ +++ L+ L + ++V +VD+ DF GSF+ I+ + G IIL
Sbjct: 54 -----------MDSEDFLNLLTGLSNKSGIVVNVVDVFDFEGSFINAIKRIVGNKKIILA 102
Query: 215 VTKVDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRD 274
K+DLLPK + V +W+ + K L V L S+ GI + I + + D
Sbjct: 103 ANKLDLLPKQINQRRVKEWLKKTARKYGLEADDVVLISADKGWGIEELMQSINQVRNNED 162
Query: 275 VYILGSANVGKSAFINALLK-KMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGG 333
VY++G+ NVGKS FIN L++ +GE+D S PGTTL I I
Sbjct: 163 VYVVGTTNVGKSTFINKLIEISVGEKDVVTT---------SRFPGTTLDMIDI-PLDETT 212
Query: 334 KLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIF 393
+YDTPG+ H+ V ++L + P+ ++ + + + E T+F
Sbjct: 213 FMYDTPGIIQEHQMTNYVSDKELKTIMPKKEIKQRVYQLNEEQ--------------TLF 258
Query: 394 WGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGW 453
+GGL RID + + + F+ L ++ T+KA+E ++ +LG LTPP +
Sbjct: 259 FGGLARIDYVSGGKRSLVCFFS-NDLNIHRTKTEKANELWKNQLGSLLTPPHDASQ---- 313
Query: 454 KGLDRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHV 513
D + ++ E T + DV ISGLG+I+++ + I V V
Sbjct: 314 --FDLNDVKAVRLE-TGKAKRDVMISGLGFITIDEGAKVI-----------------VRV 353
Query: 514 PKPVEVFVRNPM 525
PK V+V +RN +
Sbjct: 354 PKNVDVILRNSI 365
>gi|422422215|ref|ZP_16499168.1| ribosome biogenesis GTPase YqeH [Listeria seeligeri FSL S4-171]
gi|313637776|gb|EFS03129.1| ribosome biogenesis GTPase YqeH [Listeria seeligeri FSL S4-171]
Length = 366
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 116/386 (30%), Positives = 183/386 (47%), Gaps = 50/386 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT + D GY K + V+C RC L H + I V
Sbjct: 7 CIGCGAIIQTEDPDKIGYA-------PKSSLNNEQVICKRCFRLKHYNEIQDVA------ 53
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ L+ + ++ALIV +VDI DF+GS+L + AG NP++LV K D+
Sbjct: 54 -----LTDDDFLRILNQISTKQALIVYVVDIFDFDGSWLPGLPRFAGNNPVLLVGNKEDV 108
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + + W+ ++ L+ V L S++ G + +I++ + G+DVY++G
Sbjct: 109 LPKSLKRDKLTRWMRTRAKEQGLSATDVVLVSAERGHGFDTLLEKIEELRNGQDVYVVGC 168
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS IN ++K+ + +Q PGTTL I+I G L DTPG
Sbjct: 169 TNVGKSTLINRIIKQASGENNVITTSQ--------FPGTTLDKIEI-PLADGNVLVDTPG 219
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ HH+ + + L A+ P+ ++ F + E T+F G L R+
Sbjct: 220 IINHHQXXXFIDTDTLKAITPKKEVKPAVFQLNEEQ--------------TLFLGALARL 265
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D + L Y +L ++ +KAD Y+K+ G L PP EG K L +
Sbjct: 266 DYVSG-GRKSLVVYVSNNLPIHRTKLEKADALYEKQAGFVLQPP----TEEGMKTL--PK 318
Query: 461 LLEIKFEDTERPASDVAISGLGWISV 486
L+ F E+ +D+ SGLGW+++
Sbjct: 319 LVPYTFNVKEK--ADIVFSGLGWVTI 342
>gi|450061597|ref|ZP_21843908.1| GTP-binding protein YqeH [Streptococcus mutans NLML5]
gi|449207028|gb|EMC07711.1| GTP-binding protein YqeH [Streptococcus mutans NLML5]
Length = 368
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 113/387 (29%), Positives = 193/387 (49%), Gaps = 48/387 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT+ + GY E K + + C RC L H + IT V
Sbjct: 6 CIGCGAQIQTTAKEQAGYTPKSALE---KGLESGKIYCQRCFRLRHYNEITDV------- 55
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
+S D+ + L + +AL+V ++DI DFNGS + ++ ++ ++LV K D+
Sbjct: 56 ----HISDDDFLKLLHEVGDSRALVVNVIDIFDFNGSVIPGLQRFISSSDLLLVGNKADI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W++E ++ L L + LTS+++ I + ++I++ ++GRDVY++G
Sbjct: 112 LPKSVKSGKITQWLMERAHEEGLRPLDLILTSAQNKWAIKELIAKIEELRQGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G+++ S PGTTL I+I G ++DTP
Sbjct: 172 TNVGKSTLINAIIQEITGDKNIITT---------SRFPGTTLDKIEI-PLNDGSYIFDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + + L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAYYLSDKALKYISPKKEIKPKTYQLNPEQ--------------TLFLGGLAR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + T Y +L+++ +AD FY K +G LTPP K+ A K
Sbjct: 268 FDYV-TGDKQGFTAYFDNNLKLHRTKLARADAFYDKHIGSLLTPPDKKEMAAFPK----- 321
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
++ E T + +D+ SGLGWI +
Sbjct: 322 ---LVRHEFTIKEKTDLVFSGLGWIRI 345
>gi|47093412|ref|ZP_00231177.1| GTPase, putative [Listeria monocytogenes str. 4b H7858]
gi|424714366|ref|YP_007015081.1| Uncharacterized protein yqeH [Listeria monocytogenes serotype 4b
str. LL195]
gi|47018191|gb|EAL08959.1| GTPase, putative [Listeria monocytogenes str. 4b H7858]
gi|424013550|emb|CCO64090.1| Uncharacterized protein yqeH [Listeria monocytogenes serotype 4b
str. LL195]
Length = 371
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 116/386 (30%), Positives = 184/386 (47%), Gaps = 50/386 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT + D GY K + V+C RC L H + I V
Sbjct: 12 CIGCGAVIQTEDPDKIGYA-------PKSSLNNEQVICKRCFRLKHYNEIQDVA------ 58
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ L+ + ++ALIV +VDI DF+GS+L + AG+NP++LV K D+
Sbjct: 59 -----LTDDDFLRILNQISSKQALIVYVVDIFDFDGSWLPGLPRFAGSNPVLLVGNKEDV 113
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + + W+ ++ L V L S++ G + +I++ + G+DVY++G
Sbjct: 114 LPKSLKRDKLTRWMRTRAKEQGLAATDVVLVSAEKGHGFDTLLEKIEELRNGQDVYVVGC 173
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS IN ++K+ + +Q PGTTL I+I G L DTPG
Sbjct: 174 TNVGKSTLINRIIKQASGENNVITTSQ--------FPGTTLDKIEI-PLADGNVLVDTPG 224
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ HH+ A + L A+ P+ ++ F + E T+F G L R+
Sbjct: 225 IINHHQMAHFIDTTTLKAITPKKEVKPAVFQLNEEQ--------------TLFLGALARL 270
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D + L Y +L ++ +KAD Y+K+ G+ L PP EG + L +
Sbjct: 271 DYVSG-GRKSLVVYVSNNLPIHRTKLEKADALYEKQAGIVLQPP----TEEGMETL--PK 323
Query: 461 LLEIKFEDTERPASDVAISGLGWISV 486
L+ F E+ +D+ SGLGW+++
Sbjct: 324 LVPYSFTIKEK--ADIVFSGLGWVTI 347
>gi|449961116|ref|ZP_21810793.1| GTP-binding protein YqeH [Streptococcus mutans 4VF1]
gi|449166974|gb|EMB69883.1| GTP-binding protein YqeH [Streptococcus mutans 4VF1]
Length = 368
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 113/387 (29%), Positives = 193/387 (49%), Gaps = 48/387 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT+ + GY E K + + C RC L H + IT V
Sbjct: 6 CIGCGAQIQTTAKEQAGYTPKSALE---KGLESGKIYCQRCFRLRHYNEITDV------- 55
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
+S D+ + L + +AL+V ++DI DFNGS + ++ ++ ++LV K D+
Sbjct: 56 ----HISDDDFLKLLHEVGDSRALVVNVIDIFDFNGSVIPGLQRFISSSDLLLVGNKADI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W++E ++ L L + LTS+++ I + ++I++ ++GRDVY++G
Sbjct: 112 LPKSVKSGKITQWLMERAHEEGLRPLDLILTSAQNKWAIKELIAKIEELRQGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G+++ S PGTTL I+I G ++DTP
Sbjct: 172 TNVGKSTLINAIIQEITGDKNIITT---------SRFPGTTLDKIEI-PLNDGSYIFDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + + L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLSDKALKYISPKKEIKPKTYQLNPEQ--------------TLFLGGLAR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + T Y +L+++ +AD FY K +G LTPP K+ A K
Sbjct: 268 FDYV-TGDKQGFTAYFDNNLKLHRTKLARADAFYDKHIGSLLTPPDKKEMAAFPK----- 321
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
++ E T + +D+ SGLGWI +
Sbjct: 322 ---LVRHEFTIKEKTDLVFSGLGWIRI 345
>gi|194466643|ref|ZP_03072630.1| Nitric-oxide synthase [Lactobacillus reuteri 100-23]
gi|194453679|gb|EDX42576.1| Nitric-oxide synthase [Lactobacillus reuteri 100-23]
Length = 375
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 129/425 (30%), Positives = 192/425 (45%), Gaps = 63/425 (14%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG+ +QT + + GY E K+ + + C RC L H + I V
Sbjct: 13 CIGCGSIIQTEDPNGLGYTPKSALEKGKETGE---LYCQRCFRLRHYNEIAPVS------ 63
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ L+ +R ALIV +VD+ DFNGS + + G NP++LV K DL
Sbjct: 64 -----LTDDDFLRLLNQIRDANALIVYVVDVFDFNGSLIPGLHRFVGDNPVLLVGNKEDL 118
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LP+ + DW+ + L + L S+K I + I+K + RDVY++G
Sbjct: 119 LPRSLRRPKLTDWIRQQANIAGLRPIDTVLVSAKKNHQIDHLLDVIEKYRHNRDVYVVGV 178
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS IN ++K+ K S PGTTL I+I G L DTPG
Sbjct: 179 TNVGKSTLINQIIKQ--------RTGVKELITTSRFPGTTLDKIEI-PLDDGHVLVDTPG 229
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ + A V+ +DL +APQ ++ +++ + +G T+F GG+ R
Sbjct: 230 IIHQEQMAHVLSPKDLKIVAPQKEIKPKTYQLN--------------DGQTLFLGGVARF 275
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D L + Y +L ++ AD FY K LG LTPP +K + + L+R
Sbjct: 276 DYLHG-ERAGMVAYFDNNLPIHRTKLSNADNFYAKHLGDLLTPPTSDEK-DSFPPLER-- 331
Query: 461 LLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVEVF 520
+F TE+ SD+ GLGWI+V P + ++ A VPK V
Sbjct: 332 ---YEFHITEK--SDIVFEGLGWITV-PAKTTV----------------AAWVPKGVGAL 369
Query: 521 VRNPM 525
VR M
Sbjct: 370 VRRAM 374
>gi|422409721|ref|ZP_16486682.1| ribosome biogenesis GTPase YqeH [Listeria monocytogenes FSL F2-208]
gi|313608710|gb|EFR84539.1| ribosome biogenesis GTPase YqeH [Listeria monocytogenes FSL F2-208]
Length = 371
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 116/386 (30%), Positives = 184/386 (47%), Gaps = 50/386 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT + D GY K + V+C RC L H + I V
Sbjct: 12 CIGCGAIIQTEDPDKIGYA-------PKSSLNNEQVICKRCFRLKHYNEIQDVA------ 58
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ L+ + ++ALIV +VDI DF+GS+L + AG+NP++LV K D+
Sbjct: 59 -----LTDDDFLRILNQISSKQALIVYVVDIFDFDGSWLPGLPRFAGSNPVLLVGNKEDV 113
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + + W+ ++ L V L S++ G + +I++ + G+DVY++G
Sbjct: 114 LPKSLKRDKLTRWMRTRAKEQGLAATDVVLVSAEKGHGFDTLLEKIEELRNGQDVYVVGC 173
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS IN ++K+ + +Q PGTTL I+I G L DTPG
Sbjct: 174 TNVGKSTLINRIIKQASGENNVITTSQ--------FPGTTLDKIEI-PLADGNVLVDTPG 224
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ HH+ A + L A+ P+ ++ F + E T+F G L R+
Sbjct: 225 IINHHQMAHFIDTTTLKAITPKKEVKPAVFQLNEEQ--------------TLFLGALARL 270
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D + L Y +L ++ +KAD Y+K+ G+ L PP EG + L +
Sbjct: 271 DYVSG-GRKSLVVYVSNNLPIHRTKLEKADALYEKQAGIVLQPP----TEEGMETL--PK 323
Query: 461 LLEIKFEDTERPASDVAISGLGWISV 486
L+ F E+ +D+ SGLGW+++
Sbjct: 324 LVPYSFTIKEK--ADIVFSGLGWVTI 347
>gi|395238195|ref|ZP_10416133.1| Ribosome biogenesis GTPase YqeH [Lactobacillus gigeriorum CRBIP
24.85]
gi|394477899|emb|CCI86110.1| Ribosome biogenesis GTPase YqeH [Lactobacillus gigeriorum CRBIP
24.85]
Length = 369
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 120/386 (31%), Positives = 181/386 (46%), Gaps = 46/386 (11%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA LQ + + G++ P + K + + V C RC L H + I V N
Sbjct: 7 CIGCGAKLQAEDPNKAGFL-PTSALNKAIEAEDQEVYCQRCFRLRHYNEIMPVDLNN--- 62
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
D+ L+ L +KALIV +VD+ DF+ S L+ ++ G N ILV K DL
Sbjct: 63 --------DDFLALLNSLAEKKALIVNVVDLFDFSNSLLSSLKRFVGNNKFILVGNKFDL 114
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
PK + + + DW+ + + L + L S+ + + + + +D+Y +G
Sbjct: 115 FPKNSRQSKIKDWMRQEANRMGLYPEKIFLISAARQKFLDELIEYLNANSQDQDIYFVGM 174
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS INA++ KMG+ K S PGTTL I+I G L DTPG
Sbjct: 175 TNVGKSTLINAIIDKMGD--------IKDLITTSRFPGTTLDRIEI-PLDNGHYLVDTPG 225
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ ++ A + +DL ++P+ L+ ++ + L G T+F GGL RI
Sbjct: 226 IMTENQLVAHLDPKDLALVSPKKPLKPATYQL--------------LPGNTLFLGGLGRI 271
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D LK T T Y P+ + V+ ADEFY+K G LTPP+ + KG +
Sbjct: 272 DYLKG-ESTSFTVYAPREVYVHRTKVSNADEFYRKHNGEMLTPPVASKDLPELKGQE--- 327
Query: 461 LLEIKFEDTERPASDVAISGLGWISV 486
F T + SD+ G+G+I+V
Sbjct: 328 -----FHTTYK--SDLLFGGIGFITV 346
>gi|347522463|ref|YP_004780034.1| GTP-binding protein [Lactococcus garvieae ATCC 49156]
gi|385833847|ref|YP_005871622.1| GTP-binding protein [Lactococcus garvieae Lg2]
gi|343181031|dbj|BAK59370.1| GTP-binding protein [Lactococcus garvieae ATCC 49156]
gi|343183000|dbj|BAK61338.1| GTP-binding protein [Lactococcus garvieae Lg2]
Length = 368
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 119/386 (30%), Positives = 183/386 (47%), Gaps = 46/386 (11%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT + +A G++ K + + C RC L H + I V
Sbjct: 6 CIGCGALIQTEDKNALGFLPAGAL---AKRGEDDALYCQRCFRLRHYNEIADVS------ 56
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ LS + ALIV +VDI DFNGS + + G N ++LV K D+
Sbjct: 57 -----LTDDDFLRLLSEIGEHDALIVNVVDIFDFNGSLIPSLHRFTGNNDLLLVANKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LP + W+ E + L L V +TS+K+ + + +I+K +KGRDVY++G
Sbjct: 112 LPHSLKVGKMSAWLKEQAKRAGLRPLDVLVTSAKNQDDVRELMEKIEKMRKGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS INA++K + D S PGTTL I+I L DTPG
Sbjct: 172 TNVGKSTLINAIIKLVTGDDNVIT--------TSRFPGTTLDKIEI-PLDDDSLLIDTPG 222
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ + A + A+DL ++P+ ++ +++ + + G T+F GGL R
Sbjct: 223 IIHRGQMAHYLEAKDLKLVSPKKEIKPKTYQLNA--------------GQTLFLGGLARF 268
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D ++ + LT + L ++ + A EFY+K G L PP K + D +
Sbjct: 269 DYIQG-EKQGLTVFCDNELDIHRTKLEGATEFYEKHAGGLLQPPRAKNLS------DFPK 321
Query: 461 LLEIKFEDTERPASDVAISGLGWISV 486
L+ +F E+ SD+ SGLGWI V
Sbjct: 322 LIRKEFSVKEK--SDIVFSGLGWIRV 345
>gi|420143153|ref|ZP_14650656.1| GTP-binding protein [Lactococcus garvieae IPLA 31405]
gi|391856958|gb|EIT67492.1| GTP-binding protein [Lactococcus garvieae IPLA 31405]
Length = 368
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 119/386 (30%), Positives = 183/386 (47%), Gaps = 46/386 (11%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT + +A G++ K + + C RC L H + I V
Sbjct: 6 CIGCGALIQTEDKNALGFLPAGAL---AKRGEDDALYCQRCFRLRHYNEIADVS------ 56
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ LS + ALIV +VDI DFNGS + + G N ++LV K D+
Sbjct: 57 -----LTDDDFLRLLSEIGEHDALIVNVVDIFDFNGSLIPSLHRFTGNNDLLLVANKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LP + W+ E + L L V +TS+K+ + + +I+K +KGRDVY++G
Sbjct: 112 LPHSLKVGKMSAWLKEQAKRAGLRPLDVLVTSAKNQDDVRELMEKIEKMRKGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS INA++K + D S PGTTL I+I L DTPG
Sbjct: 172 TNVGKSTLINAIIKLVTGDDNVIT--------TSRFPGTTLDKIEI-PLDDDSLLIDTPG 222
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ + A + A+DL ++P+ ++ +++ + + G T+F GGL R
Sbjct: 223 IIHRGQMAHYLEAKDLKLVSPKKEIKPKTYQLNA--------------GQTLFLGGLARF 268
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D ++ + LT + L ++ + A EFY+K G L PP K + D +
Sbjct: 269 DYIQG-EKQGLTVFCDNELDIHRTKLEGATEFYEKHAGGLLQPPRAKNLS------DFPK 321
Query: 461 LLEIKFEDTERPASDVAISGLGWISV 486
L+ +F E+ SD+ SGLGWI V
Sbjct: 322 LIRKEFSVKEK--SDIVFSGLGWIRV 345
>gi|227890565|ref|ZP_04008370.1| GTP-binding protein [Lactobacillus salivarius ATCC 11741]
gi|417810594|ref|ZP_12457273.1| GTP-binding protein [Lactobacillus salivarius GJ-24]
gi|227867503|gb|EEJ74924.1| GTP-binding protein [Lactobacillus salivarius ATCC 11741]
gi|335349390|gb|EGM50890.1| GTP-binding protein [Lactobacillus salivarius GJ-24]
Length = 373
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 124/396 (31%), Positives = 188/396 (47%), Gaps = 46/396 (11%)
Query: 93 KVNSAVASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITA 152
+ N+ + C GCGA +Q+ + GY P++ KK + + + C RC L H + I
Sbjct: 3 ETNNEILYCIGCGAKIQSKNPNELGYT-PES--AVKKGLETEELYCQRCFRLRHYNEIAD 59
Query: 153 VGGNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPII 212
V ++ D+ L+ + +LIV +VDI DFNGS + + G N ++
Sbjct: 60 VS-----------LTDDDFLRLLNQIGESDSLIVNVVDIFDFNGSVIPGLHRFVGKNDVL 108
Query: 213 LVVTKVDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKG 272
LV K DLLPK + + DW+ + K+ L + V LTS+ I + I K +KG
Sbjct: 109 LVGNKSDLLPKSLKRSRIKDWLRQEANKQGLRPIDVALTSASKGYEIDNLLELIDKYRKG 168
Query: 273 RDVYILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGG 332
RDVY++G NVGKS IN ++K+ S PGTTL I+I F G
Sbjct: 169 RDVYVVGVTNVGKSTLINRIIKQQTGISELITT--------SRFPGTTLDKIEI-PFDDG 219
Query: 333 GKLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTI 392
L DTPG+ + A + + L +PQ ++ + + + NE G TI
Sbjct: 220 KNLIDTPGIIHKQQMAHYLTGKSLKFASPQKEIKPKVYQL-------NE-------GQTI 265
Query: 393 FWGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEG 452
F G L R D + T + Y +L ++ AD+FY+K G L PP +++ E
Sbjct: 266 FLGSLARFDYISG-GRTSVIAYFDNNLPLHRTKLQNADKFYEKHAGELLQPPT-REELEK 323
Query: 453 WKGLDRERLLEIKFEDTERPASDVAISGLGWISVEP 488
L R +F+ +E+ SD+ SGLGWIS+ P
Sbjct: 324 MPKLTR-----FEFKISEK--SDLVFSGLGWISLSP 352
>gi|420262361|ref|ZP_14765002.1| GTP-binding protein [Enterococcus sp. C1]
gi|394770118|gb|EJF49922.1| GTP-binding protein [Enterococcus sp. C1]
Length = 372
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 118/386 (30%), Positives = 181/386 (46%), Gaps = 46/386 (11%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT+ + GY E K + V C RC L H + I V
Sbjct: 10 CIGCGALIQTTNPNELGYTPQSALE---KGLESGEVYCQRCFRLRHYNEIQDVA------ 60
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ L+ + + ALIV +VDI DFNGS + + G NP++LV KVD+
Sbjct: 61 -----LTDDDFLRLLNEIGEKDALIVNVVDIFDFNGSLIPGLHRFVGDNPVLLVGNKVDI 115
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + + W+ E + L + V LTS+K + I+ ++GRDVY++G
Sbjct: 116 LPKSLKKSKMTQWMKERAYEVGLRPVDVLLTSAKKPGETQALLQAIETYREGRDVYVVGV 175
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS IN ++K+ + S PGTTL I+I G L DTPG
Sbjct: 176 TNVGKSTLINQIIKQTAGINELITT--------SRFPGTTLDKIEI-PLDDGHFLIDTPG 226
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ H+ A + +DL +AP ++ + + + E T+F GGL R
Sbjct: 227 IIHRHQMAHYLGKKDLKIVAPAKEIKPKVYQLNPEQ--------------TLFLGGLARF 272
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D ++ + Y + ++ KADEFY+K +G L PP + A D
Sbjct: 273 DFIQG-ERSSFVAYVANDVAIHRTKLSKADEFYEKHVGGLLQPPRADEVA------DFPE 325
Query: 461 LLEIKFEDTERPASDVAISGLGWISV 486
L ++FE + + +D+ +GLGWI++
Sbjct: 326 L--VRFEFSIKEKTDIVFAGLGWITI 349
>gi|410460447|ref|ZP_11314125.1| GTPase YqeH [Bacillus azotoformans LMG 9581]
gi|409927062|gb|EKN64208.1| GTPase YqeH [Bacillus azotoformans LMG 9581]
Length = 369
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 123/434 (28%), Positives = 200/434 (46%), Gaps = 68/434 (15%)
Query: 94 VNSAVASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAV 153
+ + V C GCG +QT GY P + + ++C RC L H + I V
Sbjct: 1 MENQVLHCQGCGVKIQTENKTEIGYAPPSALDRE-------VLICQRCFRLKHYNEIQDV 53
Query: 154 GGNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIIL 213
++ D+ + L+ + AL+VK+VDI DFNGS+L + G N ++L
Sbjct: 54 S-----------LTDDDFLKILNGIGDSDALVVKIVDIFDFNGSWLPGLHRFVGKNKVLL 102
Query: 214 VVTKVDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGR 273
V KVDLLPK + + W+ + ++ L V+L S+ G+ +A+ I ++G+
Sbjct: 103 VGNKVDLLPKSVKNSKLIHWMKYSASQLGLKPKDVYLISAAKGEGVQELAAAIDFHREGK 162
Query: 274 DVYILGSANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGG 332
+VY++G NVGKS FIN ++K+ G D +Q PGTTL I I G
Sbjct: 163 NVYVVGCTNVGKSTFINKIIKEFSGVTDDVITTSQ--------FPGTTLDLIDI-PLDDG 213
Query: 333 GKLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTI 392
L+DTPG+ HH+ A V+ + L ++P+ ++ + F + NE G T+
Sbjct: 214 TSLFDTPGIINHHQMAHFVNEKGLKMISPRKEIKPRVFQL-------NE-------GQTL 259
Query: 393 FWGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEG 452
++GGL R D + T Y L ++ +KAD+ Y+ +G L PP ++ E
Sbjct: 260 YFGGLARFDYISG-GRKSFTCYVSNELNIHRTKLEKADKLYEDHVGELLFPPFEEEVKEF 318
Query: 453 WKGLDRERLLEIKFEDTERPASDVAISGLGWISV-EPVRRSIRNSDINLESTSGELHLAV 511
+ +E ++ +D+ GLGW++ EP + +
Sbjct: 319 PPLVKQEFMI-------REAKTDIVFHGLGWVTCNEPGAK-----------------IVA 354
Query: 512 HVPKPVEVFVRNPM 525
HVPK V V +R +
Sbjct: 355 HVPKGVGVTIRQSL 368
>gi|417885655|ref|ZP_12529807.1| ribosome biogenesis GTPase YqeH [Lactobacillus oris F0423]
gi|341595151|gb|EGS37826.1| ribosome biogenesis GTPase YqeH [Lactobacillus oris F0423]
Length = 372
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 122/387 (31%), Positives = 184/387 (47%), Gaps = 48/387 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +Q+++ A GY K+ + C RC L H + I V
Sbjct: 10 CIGCGAVIQSTDPAALGYTPASAV---KRGLANDELYCQRCFRLRHYNEIAPVS------ 60
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ L +R ALIV +VDI DFNGS + + G NP++LV K DL
Sbjct: 61 -----LTDDDFLRLLGQIRDANALIVYVVDIFDFNGSLIPGLHRFVGDNPVLLVGNKEDL 115
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LP+ + DW+ + + + + L S+K I + + I+K + RDVY++G
Sbjct: 116 LPRSLRRPKLCDWIRQQANQAGIRPVDTVLVSAKKNHEIDELLATIEKYRHDRDVYVVGV 175
Query: 281 ANVGKSAFINALLK-KMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS IN ++K + G +D S PGTTL I+I G KL DTP
Sbjct: 176 TNVGKSTLINQIIKQRTGVQDLITT---------SRFPGTTLDEIEI-PLDDGHKLVDTP 225
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A V+ A+DL +APQ ++ +++ + G T+F GG+ R
Sbjct: 226 GIIHPHQMAHVLSAKDLKIVAPQKEIKPRTYQLDP--------------GQTVFIGGVAR 271
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + P + Y +L ++ AD FY+K G LTPP ++ + + L RE
Sbjct: 272 FD-FETGPHSGFVTYFDNNLTLHRTKLSNADSFYEKYRGGLLTPPTAEELND-FPPLVRE 329
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
+F E+ SDV GLGW++V
Sbjct: 330 -----EFHVNEK--SDVVFEGLGWVTV 349
>gi|347548874|ref|YP_004855202.1| hypothetical protein LIV_1447 [Listeria ivanovii subsp. ivanovii
PAM 55]
gi|346981945|emb|CBW85930.1| Putative unknown protein [Listeria ivanovii subsp. ivanovii PAM 55]
Length = 366
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 117/386 (30%), Positives = 183/386 (47%), Gaps = 50/386 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT + D GY K + V+C RC L H + I V
Sbjct: 7 CIGCGAIIQTEDPDKIGYA-------PKSSLNNEQVICKRCFRLKHYNEIQDVA------ 53
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ L+ + ++ALIV +VDI DF+GS+L + AG NP++LV K D+
Sbjct: 54 -----LTDDDFLRILNQISSKQALIVYVVDIFDFDGSWLPGLPRFAGNNPVLLVGNKEDV 108
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + + W+ ++ L+ V L S++ G + +I++ + G+DVY++G
Sbjct: 109 LPKSLKRDKLTRWMRTRAKEQGLSATDVVLVSAERGHGFDTLLEKIEELRNGQDVYVVGC 168
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS IN ++K+ + +Q PGTTL I+I G L DTPG
Sbjct: 169 TNVGKSTLINRIIKQASGENNVITTSQ--------FPGTTLDKIEI-PLADGNVLVDTPG 219
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ HH+ A + L A+ P+ ++ F + E T+F G L R+
Sbjct: 220 IINHHQMAHFIDTTTLKAITPKKEVKPAVFQLNEEQ--------------TLFLGALARL 265
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D + L Y +L ++ KAD Y+K+ G+ L PP EG K L +
Sbjct: 266 DYVSG-GRKSLVVYVSNNLPIHRTKLGKADALYEKQAGLVLQPP----TEEGMKTL--PK 318
Query: 461 LLEIKFEDTERPASDVAISGLGWISV 486
L+ F E+ +D+ SGLGW+++
Sbjct: 319 LVPYTFNVKEK--ADIVFSGLGWVTI 342
>gi|366052989|ref|ZP_09450711.1| GTPase YqeH [Lactobacillus suebicus KCTC 3549]
Length = 374
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 129/426 (30%), Positives = 194/426 (45%), Gaps = 65/426 (15%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +Q+ + + GY + +++ C RC L H + I V
Sbjct: 12 CIGCGATIQSDDPNKIGYTPKSAIQKGLDNNEL---YCQRCFRLRHYNEIAPVS------ 62
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ L+ +R ALIV +VDI DFNGS + + G NP++LV K DL
Sbjct: 63 -----LTDDDFLRLLNQIRDANALIVYVVDIFDFNGSIIPGLHRFVGDNPVLLVGNKEDL 117
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LP+ + DW+ + T + + V L S+K I + I+K + RDVY++G
Sbjct: 118 LPRSLRRTKLTDWMRQQTNANGIRPVDVTLVSAKKNHQISSLLELIEKHRGKRDVYVVGV 177
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS IN ++++ + S PGTTL I+I G +L DTPG
Sbjct: 178 TNVGKSTLINQIIRQ--------TTGVQELITTSRFPGTTLDKIEI-PLDDGKQLVDTPG 228
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ + A V+ A+ L +APQ ++ ++F + NE + TIF GG+ R
Sbjct: 229 IIHPDQMAHVLPADALKYVAPQKEIKPRTFQL-------NEQQ-------TIFLGGVARF 274
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D ++ + Y +L ++ + AD FY K +G LTPP G+ + + L+R
Sbjct: 275 DYVRG-DRNGIVAYFDNNLNLHRTKLENADAFYDKHVGGLLTPP-GENELNDFPELERHE 332
Query: 461 L-LEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVEV 519
LE K SD+ I GLGWI+V G +A PK V V
Sbjct: 333 FHLEQK--------SDLVIEGLGWITV-----------------PGNTTIAGWAPKGVSV 367
Query: 520 FVRNPM 525
VR M
Sbjct: 368 IVRRAM 373
>gi|315303239|ref|ZP_07873887.1| ribosome biogenesis GTPase YqeH [Listeria ivanovii FSL F6-596]
gi|313628396|gb|EFR96881.1| ribosome biogenesis GTPase YqeH [Listeria ivanovii FSL F6-596]
Length = 366
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 116/386 (30%), Positives = 183/386 (47%), Gaps = 50/386 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT + D GY K + V+C RC L + + I V
Sbjct: 7 CIGCGAIIQTEDPDKIGYA-------PKSSLNNEQVICKRCFRLKYYNEIQDVA------ 53
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ L+ + ++ALIV +VDI DF+GS+L + AG NP++LV K D+
Sbjct: 54 -----LTDDDFLRILNQISTKQALIVYVVDIFDFDGSWLPGLPRFAGNNPVLLVGNKEDV 108
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + + W+ ++ L V L S++ G + +I++ + G+DVY++G
Sbjct: 109 LPKSLKRDKLTRWMRTRAKEQGLVATDVVLVSAEKGHGFDSLLEKIEELRNGQDVYVVGC 168
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS IN ++K+ + +Q PGTTL I+I G L DTPG
Sbjct: 169 TNVGKSTLINRIIKQASGENNVITTSQ--------FPGTTLDKIEI-PLADGNVLVDTPG 219
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ HH+ A + L A+ P+ ++ F + E T+F G L R+
Sbjct: 220 IINHHQMAHFIDTTTLKAITPKKEVKPAVFQLNEEQ--------------TLFLGALARL 265
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D + L Y +L ++ +KAD Y+K+ G+ L PP EG K L +
Sbjct: 266 DYVSG-GRKSLVVYASNNLPIHRTKLEKADALYEKQAGLVLQPP----TEEGMKTL--PK 318
Query: 461 LLEIKFEDTERPASDVAISGLGWISV 486
L+ F E+ +D+ SGLGW+++
Sbjct: 319 LVPYTFNVKEK--ADIVFSGLGWVTI 342
>gi|225855180|ref|YP_002736692.1| GTP-binding protein YqeH [Streptococcus pneumoniae JJA]
gi|225723024|gb|ACO18877.1| GTP-binding protein [Streptococcus pneumoniae JJA]
Length = 368
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 118/392 (30%), Positives = 192/392 (48%), Gaps = 48/392 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT++ G+ E K + V C RC L H + IT V
Sbjct: 6 CIGCGATIQTTDKAGLGFTPQSALE---KGLETGEVYCQRCFRLRHYNEITDVQ------ 56
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ + L + AL+V ++DI DFNGS + + N ++LV K D+
Sbjct: 57 -----LTNDDFLKLLHEVGDSDALVVNVIDIFDFNGSVIPGLPRFVSGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W+++ ++ L + V LTS+++ I V +I+ +KGRD Y++G
Sbjct: 112 LPKSVKSGKISQWLMKRAHEEGLRPVDVVLTSAQNKHTIKEVIDKIEHYRKGRDAYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G+++ S PGTTL I+I G +YDTP
Sbjct: 172 TNVGKSTLINAIIQEITGDQNVITT---------SRFPGTTLDKIEI-PLDDGSYIYDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + A++L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLTAKNLKYVSPKKEIKPKTYQLNPEQ--------------TLFLGGLGR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + F+ L+++ + A FY K LG LTPP K+K D
Sbjct: 268 FDFIAGEKQGFTAFF-DNELKLHRSKLEGASAFYDKHLGTLLTPPNSKEKE------DFP 320
Query: 460 RLLEIKFEDTERPASDVAISGLGWISVEPVRR 491
RL++ F T + +D+ ISGLGWI V + +
Sbjct: 321 RLVQHVF--TIKDKTDLVISGLGWIRVTGIAK 350
>gi|449988609|ref|ZP_21820627.1| GTP-binding protein YqeH [Streptococcus mutans NVAB]
gi|449183787|gb|EMB85761.1| GTP-binding protein YqeH [Streptococcus mutans NVAB]
Length = 368
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 116/394 (29%), Positives = 194/394 (49%), Gaps = 49/394 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT+ + GY E K + + C RC L H + IT V
Sbjct: 6 CIGCGAQIQTTAKEQAGYTPKSALE---KGLESGKIYCQRCFRLRHYNEITDV------- 55
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
+S D+ + L + +AL+V ++DI DFNGS + ++ +N ++LV K D+
Sbjct: 56 ----HISDDDFLKLLHEVGDSRALVVNVIDIFDFNGSVIPGLQRFISSNDLLLVGNKADI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W++E ++ L + LTS+++ I + ++I++ ++GRDVY++G
Sbjct: 112 LPKSVKSGKITQWLMERAHEEGLRPFDLILTSAQNKWAIKELIAKIEELRQGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G+++ S PGTTL I+I G ++DTP
Sbjct: 172 TNVGKSTLINAIIQEITGDKNIITT---------SRFPGTTLDKIEI-PLNDGSYIFDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + + L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLSDKALKYISPKKEIKPKTYQLNPEQ--------------TLFLGGLAR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + T Y +L+++ AD FY K +G LTPP K+ A K
Sbjct: 268 FDYV-TGDKQGFTAYFDNNLKLHRTKLAGADAFYDKHIGSLLTPPDKKEMAAFPK----- 321
Query: 460 RLLEIKFEDTERPASDVAISGLGWISVEPVRRSI 493
++ E T + +D+ SGLGWI + VR I
Sbjct: 322 ---LVRHEFTIKEKTDLVFSGLGWIRIN-VRAKI 351
>gi|47095444|ref|ZP_00233054.1| GTPase, putative [Listeria monocytogenes str. 1/2a F6854]
gi|254912165|ref|ZP_05262177.1| conserved hypothetical protein [Listeria monocytogenes J2818]
gi|254936493|ref|ZP_05268190.1| GTP-binding protein YqeH [Listeria monocytogenes F6900]
gi|386047143|ref|YP_005965475.1| ribosome biogenesis GTPase YqeH [Listeria monocytogenes J0161]
gi|47016265|gb|EAL07188.1| GTPase, putative [Listeria monocytogenes serotype 1/2a str. F6854]
gi|258609086|gb|EEW21694.1| GTP-binding protein YqeH [Listeria monocytogenes F6900]
gi|293590137|gb|EFF98471.1| conserved hypothetical protein [Listeria monocytogenes J2818]
gi|345534134|gb|AEO03575.1| ribosome biogenesis GTPase YqeH [Listeria monocytogenes J0161]
Length = 366
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 116/386 (30%), Positives = 183/386 (47%), Gaps = 50/386 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT + D GY K + V+C RC L H + I V
Sbjct: 7 CIGCGAVIQTEDPDKIGYA-------PKSSLNNEQVICKRCFRLKHYNEIQDVA------ 53
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ L+ + ++ALIV +VDI DF+GS+L + AG+NP++LV K D+
Sbjct: 54 -----LTDDDFLRILNQISSKQALIVYVVDIFDFDGSWLPGLPRFAGSNPVLLVGNKEDV 108
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + + W+ ++ L V L S++ G + +I + + G+DVY++G
Sbjct: 109 LPKSLKRDKLTRWMRTRAKEQGLAATDVVLVSAEKGHGFDTLLEKIDELRNGQDVYVVGC 168
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS IN ++K+ + +Q PGTTL I+I G L DTPG
Sbjct: 169 TNVGKSTLINRIIKQASGENNVITTSQ--------FPGTTLDKIEI-PLADGNVLVDTPG 219
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ HH+ A + L A+ P+ ++ F + E T+F G L R+
Sbjct: 220 IINHHQMAHFIDTTTLKAITPKKEVKPAVFQLNEEQ--------------TLFLGALARL 265
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D + L Y +L ++ +KAD Y+K+ G+ L PP EG + L +
Sbjct: 266 DYVSG-GRKSLVVYVSNNLPIHRTKLEKADALYEKQAGIVLQPP----TEEGMETL--PK 318
Query: 461 LLEIKFEDTERPASDVAISGLGWISV 486
L+ F E+ +D+ SGLGW+++
Sbjct: 319 LVPYSFTIKEK--ADIVFSGLGWVTI 342
>gi|449932299|ref|ZP_21802790.1| GTP-binding protein YqeH [Streptococcus mutans 3SN1]
gi|449161478|gb|EMB64664.1| GTP-binding protein YqeH [Streptococcus mutans 3SN1]
Length = 368
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 114/387 (29%), Positives = 192/387 (49%), Gaps = 48/387 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT+ + GY E K + + C RC L H + IT V
Sbjct: 6 CIGCGAQIQTTAKEQAGYTPKSALE---KGLESGKIYCQRCFRLRHYNEITDV------- 55
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
+S D+ + L + KAL+V ++DI DFNGS + ++ ++ ++LV K D+
Sbjct: 56 ----HISDDDFLKFLHEVGDSKALVVNVIDIFDFNGSIIPGLQRFISSSDLLLVGNKADI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W++E ++ L L + LTS+++ I + ++I++ ++GRDVY++G
Sbjct: 112 LPKSVKSGKITQWLMERAHEEGLRPLDLILTSAQNKWAIKELIAKIEELRQGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G+++ S PGTTL I+I G ++DTP
Sbjct: 172 TNVGKSTLINAIIQEITGDKNIITT---------SRFPGTTLDKIEI-PLNDGSYIFDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + + L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLSDKALKYISPKKEIKPKTYQLNPEQ--------------TLFLGGLAR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + T Y +L+++ AD FY K +G LTPP K+ A K
Sbjct: 268 FDYV-TGDKQGFTAYFDNNLKLHRTKLAGADTFYDKHIGSLLTPPDKKEMAAFPK----- 321
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
++ E T + +D+ SGLGWI +
Sbjct: 322 ---LVRHEFTIKEKTDLVFSGLGWIRI 345
>gi|417788024|ref|ZP_12435707.1| GTP-binding protein YqeH, required for biogenesis of 30S ribosome
subunit [Lactobacillus salivarius NIAS840]
gi|334308201|gb|EGL99187.1| GTP-binding protein YqeH, required for biogenesis of 30S ribosome
subunit [Lactobacillus salivarius NIAS840]
Length = 373
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 125/400 (31%), Positives = 184/400 (46%), Gaps = 54/400 (13%)
Query: 93 KVNSAVASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITA 152
+ N+ + C GCGA +Q+ + GY P++ KK + + + C RC L H + I
Sbjct: 3 ETNNEILYCIGCGAKIQSKNPNELGYT-PES--AVKKGLETEELYCQRCFRLRHYNEIAD 59
Query: 153 VGGNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPII 212
V ++ D+ L+ + +LIV +VDI DFNGS + + G N ++
Sbjct: 60 VS-----------LTDDDFLRLLNQIGESDSLIVNVVDIFDFNGSVIPGLHRFVGKNDVL 108
Query: 213 LVVTKVDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKG 272
LV K DLLPK + + DW+ + K+ L + V LTS+ I + I K +KG
Sbjct: 109 LVGNKSDLLPKSLKRSRIKDWLRQEANKQGLRPIDVALTSASKGYEIDNLLELIDKYRKG 168
Query: 273 RDVYILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGG 332
RDVY++G NVGKS IN ++K+ S PGTTL I+I F G
Sbjct: 169 RDVYVVGVTNVGKSTLINRIIKQQTGISELITT--------SRFPGTTLDKIEI-PFDDG 219
Query: 333 GKLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTI 392
L DTPG+ + A + + L +PQ ++ + + + NE G TI
Sbjct: 220 KNLIDTPGIIHKQQMAHYLTGKSLKFASPQKEIKPKVYQL-------NE-------GQTI 265
Query: 393 FWGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEG 452
F G L R D + T + Y +L ++ AD+FY+K G L PP
Sbjct: 266 FLGSLARFDYISG-GRTSVIAYFDNNLPLHRTKLQNADKFYEKHAGELLQPPT------- 317
Query: 453 WKGLDRERLLEI----KFEDTERPASDVAISGLGWISVEP 488
RE L +I +FE SD+ SGLGWIS+ P
Sbjct: 318 -----REELEKIPKLTRFEFKISEKSDLVFSGLGWISLSP 352
>gi|418961114|ref|ZP_13513001.1| GTPase YqeH [Lactobacillus salivarius SMXD51]
gi|380344781|gb|EIA33127.1| GTPase YqeH [Lactobacillus salivarius SMXD51]
Length = 373
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 124/396 (31%), Positives = 191/396 (48%), Gaps = 46/396 (11%)
Query: 93 KVNSAVASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITA 152
+ N+ + C GCGA +Q+ + GY P++ KK + + + C RC L H + I
Sbjct: 3 ETNNEILYCIGCGAKIQSKNPNELGYT-PES--AVKKGLETEELYCQRCFRLRHYNEIAD 59
Query: 153 VGGNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPII 212
V ++ D+ L+ + +LIV +VDI DFNGS + + G N ++
Sbjct: 60 VS-----------LTDDDFLRLLNQIGESDSLIVNVVDIFDFNGSVIPGLHRFVGKNDVL 108
Query: 213 LVVTKVDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKG 272
LV K DLLPK + + DW+ + K+ L + V LTS+ I + I K +KG
Sbjct: 109 LVGNKSDLLPKSLKRSRIKDWLRQEANKQGLRPVDVALTSASKGYEIDNLLELIDKYRKG 168
Query: 273 RDVYILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGG 332
RDVY++G NVGKS IN ++K+ +++ S PGTTL I+I F G
Sbjct: 169 RDVYVVGVTNVGKSTLINRIIKQQ------TGISELI--TTSRFPGTTLDKIEI-PFDDG 219
Query: 333 GKLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTI 392
L DTPG+ + A + + L +PQ ++ + + + NE G TI
Sbjct: 220 KNLIDTPGIIHKQQMAHYLTGKSLKFASPQKEIKPKVYQL-------NE-------GQTI 265
Query: 393 FWGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEG 452
F G L R D + T + Y +L ++ AD+FY+K G L PP +++ E
Sbjct: 266 FLGSLARFDYISG-GRTSVIAYFDNNLPLHRTKLQNADKFYEKHAGELLQPPT-REELEK 323
Query: 453 WKGLDRERLLEIKFEDTERPASDVAISGLGWISVEP 488
L R +F+ +E+ SD+ SGLGWIS+ P
Sbjct: 324 MPKLTR-----FEFKISEK--SDLVFSGLGWISLSP 352
>gi|421207182|ref|ZP_15664234.1| hypothetical protein AMCSP20_001750 [Streptococcus pneumoniae
2090008]
gi|421230360|ref|ZP_15687024.1| putative GTP-binding protein [Streptococcus pneumoniae 2061376]
gi|421292619|ref|ZP_15743353.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA56348]
gi|421312558|ref|ZP_15763160.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA58981]
gi|395574518|gb|EJG35096.1| hypothetical protein AMCSP20_001750 [Streptococcus pneumoniae
2090008]
gi|395593886|gb|EJG54128.1| putative GTP-binding protein [Streptococcus pneumoniae 2061376]
gi|395891926|gb|EJH02920.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA56348]
gi|395909412|gb|EJH20288.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA58981]
Length = 368
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 118/392 (30%), Positives = 192/392 (48%), Gaps = 48/392 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT++ G+ E K + V C RC L H + IT V
Sbjct: 6 CIGCGATIQTTDKAGLGFTPQSALE---KGLETGEVYCQRCFRLRHYNEITDVQ------ 56
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ + L + AL+V ++DI DFNGS + + N ++LV K D+
Sbjct: 57 -----LTNDDFLKLLHEVGDSDALVVNVIDIFDFNGSVIPGLPRFVSGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W+++ ++ L + V LTS+++ I V +I+ +KGRDVY++G
Sbjct: 112 LPKSVKSGKISQWLMKRAHEEGLRPVDVVLTSAQNKHAIKEVIDKIEHYRKGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G+++ S PGTTL I+I G +YDTP
Sbjct: 172 TNVGKSTLINAIIQEITGDQNVITT---------SRFPGTTLDKIEI-PLDDGSYIYDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + A++L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLTAKNLKYVSPKKEIKPKTYQLNPEQ--------------TLFLGGLGR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + F+ L+++ + A FY K LG LTPP K+K D
Sbjct: 268 FDFIAGEKQGFTAFF-DNELKLHRSKLEGASAFYDKHLGTLLTPPNSKEKE------DFP 320
Query: 460 RLLEIKFEDTERPASDVAISGLGWISVEPVRR 491
L++ F T + +D+ ISGLGWI V + +
Sbjct: 321 SLVQHVF--TIKDKTDLVISGLGWIRVTGIAK 350
>gi|386585533|ref|YP_006081935.1| GTP-binding protein YqeH [Streptococcus suis D12]
gi|353737679|gb|AER18687.1| GTP-binding protein YqeH [Streptococcus suis D12]
Length = 368
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 117/387 (30%), Positives = 184/387 (47%), Gaps = 48/387 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT + G+ E K + + C RC L H + I+ V
Sbjct: 6 CIGCGAQIQTLDKAVAGFTPQSALE---KGLETGQLYCQRCFRLRHYNEISDVN------ 56
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
+S D+ + L + AL+V ++DI DFNGS + + N ++LV K D+
Sbjct: 57 -----ISDDDFLKLLHSVGESDALVVNVIDIFDFNGSVIPGLPRFISGNDVLLVGNKQDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK V W+ E + + + V LTS+++ I + +I++ +KGRDVY++G
Sbjct: 112 LPKSVKTGKVTQWLTERAHEIGMRPVDVVLTSAQNKQAIKDLIEKIEQHRKGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G++D S PGTTL I+I G +YDTP
Sbjct: 172 TNVGKSTLINAIIQEITGDKDVITT---------SRFPGTTLDKIEI-PLDDGSYIYDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + A++L ++P+ ++ +++ + E T+F GL R
Sbjct: 222 GIIHRHQMAHYLTAKNLKYISPRKEIKPKTYQLNPEQ--------------TLFLAGLGR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + F+ LQ++ A EFYQK G L PP K+ E
Sbjct: 268 FDFVAGERQGFTAFFD-NELQLHRTKLQGASEFYQKHAGTLLVPPTSKELKE------FP 320
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
L+ +F E+ +DV SGLGWI V
Sbjct: 321 ELVRHEFTINEK--TDVVFSGLGWIRV 345
>gi|379795955|ref|YP_005325953.1| putative GTPase [Staphylococcus aureus subsp. aureus MSHR1132]
gi|356872945|emb|CCE59284.1| putative GTPase [Staphylococcus aureus subsp. aureus MSHR1132]
Length = 366
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 130/432 (30%), Positives = 208/432 (48%), Gaps = 70/432 (16%)
Query: 96 SAVASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKT-VLCGRCRLLSHGHMITAVG 154
S + C GCGAPLQ+ + + PG+V +H+ F+ V+C RC L + + + VG
Sbjct: 2 SDILKCIGCGAPLQSEDKNKPGFV--------PEHNLFRDDVICRRCFRLKNYNEVQDVG 53
Query: 155 GNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILV 214
+ +++ + LS L +K ++V +VD+ DF GSF+ ++ + G IIL
Sbjct: 54 -----------LESEDFLKLLSGLADKKGIVVNVVDVFDFEGSFINAVKRIVGNKKIILA 102
Query: 215 VTKVDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRD 274
K+DLLPK + V +W+ K L V L S++ GI + S I K ++ D
Sbjct: 103 ANKLDLLPKQINKRRVKEWLKRTARKYGLEADDVVLISAEKGWGIDDLLSSIAKVRENED 162
Query: 275 VYILGSANVGKSAFINALLK-KMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGG 333
VYI+G+ NVGKS IN L++ +GE+D S PGTTL I I
Sbjct: 163 VYIVGTTNVGKSTLINKLIEASVGEKDVVTT---------SRFPGTTLDMIDI-PLDETS 212
Query: 334 KLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIF 393
++DTPG+ H+ +V ++L + P+ ++ + + + E T+F
Sbjct: 213 FMFDTPGIIQDHQMTHLVSEKELKIIMPKKEIKQRVYQLNEEQ--------------TLF 258
Query: 394 WGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGW 453
+GGL RID + + F+ L ++ T+KA+E ++ +LG LTPP Q
Sbjct: 259 FGGLARIDYVSGGKRPLICFFS-NELNIHRTKTEKANELWRNQLGELLTPPSNPQ----- 312
Query: 454 KGLDRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHV 513
D + ++ E T + DV ISGLG+I++ P + I V V
Sbjct: 313 -NFDLNEVKAVRLE-TGKEKRDVMISGLGFITIGPGAKVI-----------------VRV 353
Query: 514 PKPVEVFVRNPM 525
PK V+V +RN +
Sbjct: 354 PKNVDVILRNSI 365
>gi|449915664|ref|ZP_21796411.1| GTP-binding protein YqeH [Streptococcus mutans 15JP3]
gi|449156142|gb|EMB59622.1| GTP-binding protein YqeH [Streptococcus mutans 15JP3]
Length = 368
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 114/387 (29%), Positives = 192/387 (49%), Gaps = 48/387 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT+ + GY E K + + C RC L H + IT V
Sbjct: 6 CIGCGAQIQTTAKEQAGYTPKSALE---KGLESGKIYCQRCFRLRHYNEITDV------- 55
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
+S D+ + L + KAL+V ++DI DFNGS + ++ ++ ++LV K D+
Sbjct: 56 ----HISDDDFLKFLHEVGDSKALVVNVIDIFDFNGSIIPGLQRFISSSDLLLVGNKADI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W++E ++ L L + LTS+++ I + ++I++ ++GRDVY++G
Sbjct: 112 LPKSVKSGKITQWLMERAHEEGLRPLDLILTSAQNKWAIKELIAKIEELRQGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G+++ S PGTTL I+I G ++DTP
Sbjct: 172 TNVGKSTLINAIIQEITGDKNIITT---------SRFPGTTLDKIEI-PLNDGSYIFDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + + L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLSDKALKYISPKKEIKPKTYQLNPEQ--------------TLFLGGLAR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + T Y +L+++ AD FY K +G LTPP K+ A K
Sbjct: 268 FDYV-TGDKQGFTAYFDNNLKLHRTKLAGADTFYDKHIGSLLTPPDKKEMAAFPK----- 321
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
++ E T + +D+ SGLGWI +
Sbjct: 322 ---LVRHEFTIKEKTDLVFSGLGWIRI 345
>gi|304403895|ref|ZP_07385557.1| ribosome biogenesis GTPase YqeH [Paenibacillus curdlanolyticus YK9]
gi|304346873|gb|EFM12705.1| ribosome biogenesis GTPase YqeH [Paenibacillus curdlanolyticus YK9]
Length = 375
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 128/430 (29%), Positives = 199/430 (46%), Gaps = 69/430 (16%)
Query: 99 ASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRC-RLLSHGHMITAVGGNG 157
ASC GCG LQT++ + GY+ E +C RC R+ ++ T
Sbjct: 11 ASCAGCGVKLQTTDKELSGYIPASAAERVPA-------ICQRCFRIKNYNDASTVT---- 59
Query: 158 GYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTK 217
+ D+ L + +L+V +VD+ DF GS ++ ++ G+NP++LVV K
Sbjct: 60 --------IDQDDFLRLLGGIASTDSLVVHIVDLFDFEGSVISGLQRFVGSNPVLLVVNK 111
Query: 218 VDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYI 277
+DLLPK ++N + +WV + ++ L + V L S+K G V I+ + RDVY+
Sbjct: 112 IDLLPKAVNYNRIRNWVQQQAKEQGLKTVDVVLCSAKRNIGFDRVVEAIEHFRGRRDVYV 171
Query: 278 LGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYD 337
+G+ NVGKS IN +++ + D A +Y PGTTL + I G + D
Sbjct: 172 VGATNVGKSTLINRIIQDYSDLD-AELTTSRY-------PGTTLDAVHI-PLDDGKSIID 222
Query: 338 TPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGL 397
TPG+ HR +V L A+ P ++ + + NE G T+F G L
Sbjct: 223 TPGIVYSHRMTELVPRSVLQAILPDKPIKPLVYQL-------NE-------GQTMFVGAL 268
Query: 398 VRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAE--GWKG 455
R D + ++ T Y L+V+ ++A+E Y GV L+PP ++ E W
Sbjct: 269 ARFDFVSGDRQS-FTLYISNGLEVHRTKLERAEELYANHKGVLLSPPSVEELDELPAWT- 326
Query: 456 LDRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPK 515
R L + D DV +SGLGW+ V TSG L + V+VPK
Sbjct: 327 --RHSLRIPRGGD-----YDVFVSGLGWMQV--------------NGTSGAL-VDVYVPK 364
Query: 516 PVEVFVRNPM 525
V+V VR+ +
Sbjct: 365 GVKVLVRDSL 374
>gi|116872920|ref|YP_849701.1| GTP-binding protein YqeH [Listeria welshimeri serovar 6b str.
SLCC5334]
gi|116741798|emb|CAK20922.1| GTPase family protein [Listeria welshimeri serovar 6b str.
SLCC5334]
Length = 366
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 116/386 (30%), Positives = 184/386 (47%), Gaps = 50/386 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT + + GY K + V+C RC L H + I V
Sbjct: 7 CIGCGAIIQTEDPEKIGYA-------PKSSLNNEQVICKRCFRLKHYNEIQDVA------ 53
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ L+ + ++ALIV +VDI DF+GS+L + AG+NP++LV K D+
Sbjct: 54 -----LTDDDFLRILNQISSKQALIVYVVDIFDFDGSWLPGLPRFAGSNPVLLVGNKEDV 108
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + + W+ ++ L V L S++ G + +I++ + G+DVY++G
Sbjct: 109 LPKSLKRDKLTRWMRTRAKEQGLAATDVVLVSAEKGHGFDTLLEKIEELRNGQDVYVVGC 168
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS IN ++K+ + +Q PGTTL I+I G L DTPG
Sbjct: 169 TNVGKSTLINRIIKQASGENNVITTSQ--------FPGTTLDKIEI-PLADGNVLVDTPG 219
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ HH+ A + L A+ P+ ++ F + E T+F G L R+
Sbjct: 220 IINHHQMAHFIDTTTLKAITPKKEVKPAVFQLNEEQ--------------TLFLGALARL 265
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D + L Y +L ++ +KAD+ Y+K+ G L PP +G K L +
Sbjct: 266 DYVSG-GRKSLVVYVSNNLPIHRTKLEKADDLYEKQAGFVLQPP----TEDGMKTL--PK 318
Query: 461 LLEIKFEDTERPASDVAISGLGWISV 486
L+ F T + +D+ SGLGWI++
Sbjct: 319 LVPYSF--TVKEKADIVFSGLGWITI 342
>gi|449926275|ref|ZP_21800673.1| GTP-binding protein YqeH [Streptococcus mutans 4SM1]
gi|449160747|gb|EMB63989.1| GTP-binding protein YqeH [Streptococcus mutans 4SM1]
Length = 368
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 114/387 (29%), Positives = 192/387 (49%), Gaps = 48/387 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT+ + GY E K + + C RC L H + IT V
Sbjct: 6 CIGCGAQIQTTAKEQAGYTPKSALE---KGLESGKIYCQRCFRLRHYNEITDV------- 55
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
+S D+ + L + KAL+V ++DI DFNGS + ++ ++ ++LV K D+
Sbjct: 56 ----HISDDDFLKLLHEVGDSKALVVNVIDIFDFNGSVIPGLQRFISSSDLLLVGNKADI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W++E ++ L L + LTS+++ I + ++I++ ++GRDVY++G
Sbjct: 112 LPKSVKSGKITQWLMERAYEEGLRPLDLILTSAQNKWAIKELIAKIEELRQGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G+++ S PGTTL I+I G ++DTP
Sbjct: 172 TNVGKSTLINAIIQEITGDKNIITT---------SRFPGTTLDKIEI-PLNDGSYIFDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + + L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLSDKALKYISPKKEIKPKTYQLNPEQ--------------TLFLGGLAR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + T Y +L+++ AD FY K +G LTPP K+ A K
Sbjct: 268 FDYV-TGDKQGFTAYFDNNLKLHRTKLAGADAFYDKHIGSLLTPPDKKEMAAFPK----- 321
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
++ E T + +D+ SGLGWI +
Sbjct: 322 ---LVRHEFTIKEKTDLVFSGLGWIRI 345
>gi|374338656|ref|YP_005095373.1| GTP-binding protein YqeH [Streptococcus macedonicus ACA-DC 198]
gi|372284773|emb|CCF03066.1| GTP-binding protein YqeH, required for biogenesis of 30S ribosome
subunit [Streptococcus macedonicus ACA-DC 198]
Length = 372
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 119/393 (30%), Positives = 191/393 (48%), Gaps = 48/393 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +Q + + GY E K + + C RC L H + IT V
Sbjct: 6 CIGCGAKIQIEDKEKAGYTPKAALE---KGLESGKLYCQRCFRLRHYNEITDV------- 55
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ DE + L + AL+V +VDI DFNGS + + N ++LV K D+
Sbjct: 56 ----HITDDEFLKLLHEVGDSDALVVNVVDIFDFNGSVIPGLPRFVSDNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + V W+ E ++ + + V LTS+++ I + +I+K ++GRDVY++G
Sbjct: 112 LPKSVKDSKVTQWLTERAHEEGIRPVDVVLTSAQNHQAIKDLIEKIEKLRRGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA++K++ GE+D S PGTTL I+I G ++DTP
Sbjct: 172 TNVGKSTLINAIIKEITGEKDIITT---------SRFPGTTLDKIEI-PLDDGSYIFDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + ++L ++P+ ++ +++ + E T+F GL R
Sbjct: 222 GIIHRHQMAHYLGDKNLKYISPKKEIKPKTYQLNPEQ--------------TLFLAGLGR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + T Y +L+++ AD FY K +G LTPP K+ +D
Sbjct: 268 FDFISG-DKQGFTAYFDNNLKLHRTKLAGADAFYDKHVGSLLTPPTDKEL------VDFP 320
Query: 460 RLLEIKFEDTERPASDVAISGLGWISVEPVRRS 492
+L ++ E T + DV SGLGWI ++ + S
Sbjct: 321 KL--VRHEFTIKAKMDVVYSGLGWIRIKASQDS 351
>gi|307704298|ref|ZP_07641216.1| conserved hypothetical protein [Streptococcus mitis SK597]
gi|307622134|gb|EFO01153.1| conserved hypothetical protein [Streptococcus mitis SK597]
Length = 368
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 116/387 (29%), Positives = 191/387 (49%), Gaps = 48/387 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT++ G+ E K + V C RC L H + IT V
Sbjct: 6 CIGCGATIQTTDKAGLGFTPQSALE---KGLETGEVYCQRCFRLRHYNEITDVQ------ 56
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ + L + AL+V ++DI DFNGS + + N ++LV K D+
Sbjct: 57 -----LTDDDFLKLLHEVGDSDALVVNVIDIFDFNGSVIPGLPRFVSGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W++E ++ L + V LTS+++ I V +I+ +KGRDVY++G
Sbjct: 112 LPKSVKPGKISQWLMERAHEEGLRPVDVVLTSAQNKHAIKEVIDKIEHYRKGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS IN++++++ G+++ S PGTTL I+I G +YDTP
Sbjct: 172 TNVGKSTLINSIIQEITGDQNVITT---------SRFPGTTLDKIEI-PLDDGSYIYDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + A++L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLTAKNLKYVSPKKEIKPKTYQLNPEQ--------------TLFLGGLGR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + F+ L+++ + A FY K +G LTPP K+K D
Sbjct: 268 FDFIAGEKQGFTAFF-DNELKLHRTKLEGASAFYDKHVGTLLTPPNSKEKE------DFP 320
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
+L++ F ++ +D+ ISGLGWI V
Sbjct: 321 KLVQHVFNIKDK--TDLVISGLGWIRV 345
>gi|450052101|ref|ZP_21841149.1| GTP-binding protein YqeH [Streptococcus mutans NFSM1]
gi|449201224|gb|EMC02230.1| GTP-binding protein YqeH [Streptococcus mutans NFSM1]
Length = 368
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 120/426 (28%), Positives = 202/426 (47%), Gaps = 65/426 (15%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT+ + GY K + + C RC L H + IT V
Sbjct: 6 CIGCGAQIQTTAKEQAGYTPKSAL---GKGLESGKIYCQRCFRLRHYNEITDV------- 55
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
+S D+ + L + +AL+V ++DI DFNGS + ++ +N ++LV K D+
Sbjct: 56 ----HISDDDFLKLLHEVGDSRALVVNVIDIFDFNGSVIPGLQRFISSNDLLLVGNKADI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W++E ++ L L + LTS+++ I + ++I++ ++GRDVY++G
Sbjct: 112 LPKSVKSGKITQWLIERAHEEGLRPLDLILTSAQNKWAIKELIAKIEELRQGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G+++ S PGTTL I+I G ++DTP
Sbjct: 172 TNVGKSTLINAIIQEITGDKNIITT---------SRFPGTTLDKIEI-PLNDGSYIFDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + + L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLSDKALKYISPKKEIKPKTYQLNPEQ--------------TLFLGGLAR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + T Y +L+++ AD FY K +G LTPP K+ A K
Sbjct: 268 FDYV-TGDKQGFTAYFDNNLKLHRTKLAGADAFYDKHIGSLLTPPDKKEMAAFPK----- 321
Query: 460 RLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVEV 519
++ E T + +D+ SGLGWI + +G +AV P+ V V
Sbjct: 322 ---LVRHEFTIKEKTDLVFSGLGWIRI-----------------NGRAKIAVWAPEGVAV 361
Query: 520 FVRNPM 525
R +
Sbjct: 362 VTRKSL 367
>gi|449876633|ref|ZP_21782890.1| GTP-binding protein YqeH [Streptococcus mutans S1B]
gi|449252026|gb|EMC50018.1| GTP-binding protein YqeH [Streptococcus mutans S1B]
Length = 368
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 113/387 (29%), Positives = 192/387 (49%), Gaps = 48/387 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT+ + GY K + + C RC L H + IT V
Sbjct: 6 CIGCGAQIQTTAKEQAGYTPKSAL---GKGLESGKIYCQRCFRLRHYNEITDV------- 55
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
+S D+ + L + +AL+V ++DI DFNGS ++ ++ +N ++LV K D+
Sbjct: 56 ----HISDDDFLKLLHEVGDSRALVVNVIDIFDFNGSVISGLQRFISSNDLLLVGNKADI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W++E ++ L L + LTS+++ I + ++I++ ++GRDVY++G
Sbjct: 112 LPKSVKSGKITQWLMERAHEEGLRPLDLILTSAQNKWAIKELIAKIEELRQGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G+++ S PGTTL I+I G ++DTP
Sbjct: 172 TNVGKSTLINAIIQEITGDKNIITT---------SRFPGTTLDKIEI-PLNDGSYIFDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + + L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLSDKALKYISPKKEIKPKTYQLNPEQ--------------TLFLGGLAR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + T Y +L+++ AD FY K +G LTPP K+ A K
Sbjct: 268 FDYV-TGDKQGFTAYFDNNLKLHRTKLAGADTFYDKHIGSLLTPPDKKEMAAFPK----- 321
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
++ E T + +D+ SGLGWI +
Sbjct: 322 ---LVRHEFTIKEKTDLVFSGLGWIRI 345
>gi|449883956|ref|ZP_21785426.1| GTP-binding protein YqeH [Streptococcus mutans SA38]
gi|449249416|gb|EMC47546.1| GTP-binding protein YqeH [Streptococcus mutans SA38]
Length = 368
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 113/387 (29%), Positives = 191/387 (49%), Gaps = 48/387 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT+ + GY E K + + C RC L H + IT V
Sbjct: 6 CIGCGAQIQTTAKEQAGYTPKSALE---KGLESGKIYCQRCFRLRHYNEITDV------- 55
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
+S D+ + L + + L+V ++DI DFNGS + ++ +N ++LV K D+
Sbjct: 56 ----HISDDDFLKLLHEVGDSRTLVVNVIDIFDFNGSVIPGLQRFISSNDLLLVGNKADI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W++E ++ L L + LTS+++ I + ++I++ ++GRDVY++G
Sbjct: 112 LPKSVKSGKITQWLMERAHEEGLRPLDLILTSAQNKWAIKELIAKIEELRQGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G+++ S PGTTL I+I G ++DTP
Sbjct: 172 TNVGKSTLINAIIQEITGDKNIITT---------SRFPGTTLDKIEI-PLNDGSYIFDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + + L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLSDKALKYISPKKEIKPKTYQLNPEQ--------------TLFLGGLAR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + T Y +L+++ AD FY K +G LTPP K+ A K
Sbjct: 268 FDYV-TGDKQGFTAYFDNNLKLHRTKLAGADTFYDKHIGSLLTPPDKKEMAAFPK----- 321
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
++ E T + +D+ SGLGWI +
Sbjct: 322 ---LVRHEFTIKEKTDLVFSGLGWIRI 345
>gi|450006352|ref|ZP_21827181.1| GTP-binding protein YqeH [Streptococcus mutans NMT4863]
gi|449187647|gb|EMB89415.1| GTP-binding protein YqeH [Streptococcus mutans NMT4863]
Length = 368
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 113/387 (29%), Positives = 192/387 (49%), Gaps = 48/387 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT+ + GY E K + + C RC L H + IT V
Sbjct: 6 CIGCGAQIQTTAKEQAGYTPKSALE---KGLESGKIYCQRCFRLRHYNEITDV------- 55
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
+S D+ + L + +AL+V ++DI DFNGS + ++ ++ ++LV K D+
Sbjct: 56 ----HISDDDFLKLLHEVGDSRALVVNVIDIFDFNGSVIPGLQRFISSSDLLLVGNKADI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W++E ++ L L + LTS+++ I + ++I++ ++GRDVY++G
Sbjct: 112 LPKSVKSGKITQWLMERAHEEGLRPLDLILTSAQNKWAIKELIAKIEELRQGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G+++ S PGTTL I+I G ++DTP
Sbjct: 172 TNVGKSTLINAIIQEITGDKNIITT---------SRFPGTTLDKIEI-PLNDGSYIFDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + + L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLSDKALKYISPKKEIKPKTYQLNPEQ--------------TLFLGGLAR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + T Y +L+++ AD FY K +G LTPP K+ A K
Sbjct: 268 FDYV-TGDQQGFTAYFDNNLKLHRTKLAGADTFYDKHIGSLLTPPDKKEMAAFPK----- 321
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
++ E T + +D+ SGLGWI +
Sbjct: 322 ---LVRHEFTIKEKTDLVFSGLGWIRI 345
>gi|418228253|ref|ZP_12854870.1| hypothetical protein SPAR135_1637 [Streptococcus pneumoniae
3063-00]
gi|353880648|gb|EHE60463.1| hypothetical protein SPAR135_1637 [Streptococcus pneumoniae
3063-00]
Length = 368
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 124/426 (29%), Positives = 202/426 (47%), Gaps = 65/426 (15%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT++ G+ E K + V C RC L H + IT V
Sbjct: 6 CIGCGATIQTTDKAGLGFTPQSALE---KGLETGEVYCQRCFRLRHYNEITDVQ------ 56
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ + L + +L+V ++DI DFNGS + + N ++LV K D+
Sbjct: 57 -----LTDDDFLKLLHEVGDSDSLVVNVIDIFDFNGSVIPGLPRFVSGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W++E ++ L + V LTS+++ I V +I+ +KGRDVY++G
Sbjct: 112 LPKSVKPGKISQWLMERAHEEGLRPVDVVLTSAQNKHAIKEVIDKIEHYRKGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G+++ S PGTTL I I G +YDTP
Sbjct: 172 TNVGKSTLINAIIQEITGDQNVITT---------SRFPGTTLDKIDI-PLDDGSYIYDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + A++L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLTAKNLKYVSPKKEIKPKTYQLNPEQ--------------TLFLGGLGR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + F+ L+++ + A +FY K +G LTPP K+K E K + +
Sbjct: 268 FDFITGEKQGFTAFF-DNELKLHRTKLEGASDFYDKHVGTLLTPPNSKEKEEFPKLV--Q 324
Query: 460 RLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVEV 519
+ IK +D+ ISGLGWI V +G +AV P+ V V
Sbjct: 325 HVFNIK------DKTDLVISGLGWIRV-----------------TGIAKVAVWAPEGVAV 361
Query: 520 FVRNPM 525
+R +
Sbjct: 362 VIRKAI 367
>gi|146320205|ref|YP_001199916.1| GTP-binding protein YqeH [Streptococcus suis 98HAH33]
gi|253751231|ref|YP_003024372.1| GTP-binding protein YqeH [Streptococcus suis SC84]
gi|253753132|ref|YP_003026272.1| GTP-binding protein YqeH [Streptococcus suis P1/7]
gi|253754955|ref|YP_003028095.1| GTP-binding protein YqeH [Streptococcus suis BM407]
gi|330832202|ref|YP_004401027.1| GTP-binding protein YqeH [Streptococcus suis ST3]
gi|386577334|ref|YP_006073739.1| GTP-binding protein [Streptococcus suis GZ1]
gi|386579314|ref|YP_006075719.1| GTP-binding protein YqeH [Streptococcus suis JS14]
gi|386581378|ref|YP_006077782.1| GTP-binding protein YqeH [Streptococcus suis SS12]
gi|386583488|ref|YP_006079891.1| GTP-binding protein YqeH [Streptococcus suis D9]
gi|386587609|ref|YP_006084010.1| GTP-binding protein YqeH [Streptococcus suis A7]
gi|145691011|gb|ABP91516.1| Predicted GTPase [Streptococcus suis 98HAH33]
gi|251815520|emb|CAZ51100.1| GTP-binding protein [Streptococcus suis SC84]
gi|251817419|emb|CAZ55157.1| GTP-binding protein [Streptococcus suis BM407]
gi|251819377|emb|CAR44789.1| GTP-binding protein [Streptococcus suis P1/7]
gi|292557796|gb|ADE30797.1| GTP-binding protein [Streptococcus suis GZ1]
gi|319757506|gb|ADV69448.1| GTP-binding protein YqeH [Streptococcus suis JS14]
gi|329306425|gb|AEB80841.1| GTP-binding protein YqeH [Streptococcus suis ST3]
gi|353733524|gb|AER14534.1| GTP-binding protein YqeH [Streptococcus suis SS12]
gi|353735634|gb|AER16643.1| GTP-binding protein YqeH [Streptococcus suis D9]
gi|354984770|gb|AER43668.1| GTP-binding protein YqeH [Streptococcus suis A7]
Length = 368
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 117/387 (30%), Positives = 184/387 (47%), Gaps = 48/387 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT + G+ E K + + C RC L H + I+ V
Sbjct: 6 CIGCGAQIQTLDKAVAGFTPQSALE---KGLETGQLYCQRCFRLRHYNEISDVN------ 56
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
+S D+ + L + AL+V ++DI DFNGS + + N ++LV K D+
Sbjct: 57 -----ISDDDFLKLLHSVGESDALVVNVIDIFDFNGSVIPGLPRFISGNDVLLVGNKQDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK V W+ E + + + V LTS+++ I + +I++ +KGRDVY++G
Sbjct: 112 LPKSVKTGKVTQWLTERAHEIGMRPVDVVLTSAQNKQAIKDLIEKIEQHRKGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G++D S PGTTL I+I G +YDTP
Sbjct: 172 TNVGKSTLINAIIQEITGDKDVITT---------SRFPGTTLDKIEI-PLDDGSYIYDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + A++L ++P+ ++ +++ + E T+F GL R
Sbjct: 222 GIIHRHQMAHYLTAKNLKYISPRKEIKPKTYQLNPEQ--------------TLFLAGLGR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + F+ LQ++ A EFYQK G L PP K+ E
Sbjct: 268 FDFVAGERQGFTAFFD-NELQLHRTKLQGASEFYQKHAGSLLVPPTSKELKE------FP 320
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
L+ +F E+ +DV SGLGWI V
Sbjct: 321 ELVRHEFTINEK--TDVVFSGLGWIRV 345
>gi|408790073|ref|ZP_11201706.1| GTP-binding protein YqeH, required for biogenesis of 30S ribosome
subunit [Lactobacillus florum 2F]
gi|408520647|gb|EKK20682.1| GTP-binding protein YqeH, required for biogenesis of 30S ribosome
subunit [Lactobacillus florum 2F]
Length = 376
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 120/388 (30%), Positives = 184/388 (47%), Gaps = 51/388 (13%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT+ +A GY L+K + C RC L H + I V
Sbjct: 15 CIGCGALIQTTSPNAAGYTPKSA--LEKGLASGGDLYCQRCFRLRHYNEIQPVA------ 66
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ DE LS +R KAL+V ++DI D NGS ++ ++ G NPI+ V KVDL
Sbjct: 67 -----LADDEFLRLLSRIRETKALVVYVIDIFDVNGSLISGLQRFVGDNPILAVGNKVDL 121
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LP + DW+ + + L +++ L S+K+ + + + + + GRDVY++G
Sbjct: 122 LPASFKPKKMKDWLRQMLNQAGLRPVAIELVSAKTNQAVDQLLAAVNQAANGRDVYVVGV 181
Query: 281 ANVGKSAFINALLKK-MGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS IN ++++ G +D S PGTTL I+I G +L DTP
Sbjct: 182 TNVGKSTLINQIIRESSGIKDVITT---------SKFPGTTLDLIKI-PLDNGRELIDTP 231
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLN-GFTIFWGGLV 398
G+ + A + DL + PQ R++ +S+ LN G T+F G L
Sbjct: 232 GIIQESQMAHYLQPADLKYVTPQKRIKPRSYQ---------------LNPGQTLFLGALG 276
Query: 399 RIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDR 458
R D ++ ++ T + ++ V+ + A +F+ K G LTPP G + L R
Sbjct: 277 RFDFIQG-QKSGFTVFADNNVMVHRTKLENATDFFAKHAGELLTPPTGNTTVQ---PLQR 332
Query: 459 ERLLEIKFEDTERPASDVAISGLGWISV 486
E K DT SD+ GLGW++V
Sbjct: 333 H---EFKVTDT----SDLVFEGLGWVTV 353
>gi|452994694|emb|CCQ93697.1| GTPase involved in ribosome 30S assembly [Clostridium ultunense
Esp]
Length = 385
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 113/386 (29%), Positives = 185/386 (47%), Gaps = 49/386 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGAPLQ+ + + PGY+ +E ++ +C RC + H + V
Sbjct: 23 CPGCGAPLQSEDKNLPGYLPIHAWEKEE-------AVCLRCFRIKHYNEAVQVD------ 69
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
+ ++ + L + +AL+V LVD++D NG+ L+ + G NP +LV K+DL
Sbjct: 70 -----LREEDFLQVLHSIGSTEALVVHLVDLIDVNGTLLSGLHRFIGQNPFLLVGNKLDL 124
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LP+ + + + W++ + L + V L S+ + + + +++ +KG++VY +G+
Sbjct: 125 LPQRVNLDRIRRWLLMMAREWGLKPVDVMLISALKGSYLQELLEKLEAYRKGKNVYFIGA 184
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS F+N LLK+ GE+ ++ PGTTL I+I YDTPG
Sbjct: 185 TNVGKSTFMNRLLKEYGEKGTIEITTSRF-------PGTTLDLIEIPVD-EHSSFYDTPG 236
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
V H+ + EDL + PQ R+ + + + E T+F GG+ RI
Sbjct: 237 VMTPHQIIRYLSPEDLKKVIPQKRINPKVYQLEPEQ--------------TLFLGGMARI 282
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDR-E 459
D + P++ + Y + V+ A E +K G L+PP G + LDR
Sbjct: 283 DFISGTPQSFIV-YISNEIPVHRTKRSHAGELQEKHRGELLSPP-------GKENLDRLP 334
Query: 460 RLLEIKFEDTERPASDVAISGLGWIS 485
++ F E D+AISGLGW+S
Sbjct: 335 PWVKHSFNLKEGEKQDIAISGLGWVS 360
>gi|450000106|ref|ZP_21824925.1| GTP-binding protein YqeH [Streptococcus mutans N29]
gi|449186162|gb|EMB88005.1| GTP-binding protein YqeH [Streptococcus mutans N29]
Length = 368
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 113/387 (29%), Positives = 192/387 (49%), Gaps = 48/387 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT+ + GY E K + + C RC L H + IT V
Sbjct: 6 CIGCGAQIQTTAKEQAGYTPKSALE---KGLESGKIYCQRCFRLRHYNEITDV------- 55
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
+S D+ + L + +AL+V ++DI DFNGS + ++ ++ ++LV K D+
Sbjct: 56 ----HISDDDFLKLLHEVGDSRALVVNVIDIFDFNGSVIPGLQSFISSSDLLLVGNKADI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W++E ++ L L + LTS+++ I + ++I++ ++GRDVY++G
Sbjct: 112 LPKSVKSGKITQWLMERAHEEGLRPLDLILTSAQNKWAIKELIAKIEELRQGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G+++ S PGTTL I+I G ++DTP
Sbjct: 172 TNVGKSTLINAIIQEITGDKNIITT---------SRFPGTTLDKIEI-PLNDGSYIFDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + + L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLSDKALKYISPKKEIKPKTYQLNPEQ--------------TLFLGGLAR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + T Y +L+++ AD FY K +G LTPP K+ A K
Sbjct: 268 FDYV-TGDKQGFTAYFDNNLKLHRTKLAGADTFYDKHIGSLLTPPDKKEMAAFPK----- 321
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
++ E T + +D+ SGLGWI +
Sbjct: 322 ---LVRHEFTIKEKTDLVFSGLGWIRI 345
>gi|387785525|ref|YP_006250621.1| putative GTP-binding protein [Streptococcus mutans LJ23]
gi|450169919|ref|ZP_21883266.1| GTP-binding protein YqeH [Streptococcus mutans SM4]
gi|379131926|dbj|BAL68678.1| putative GTP-binding protein [Streptococcus mutans LJ23]
gi|449246500|gb|EMC44803.1| GTP-binding protein YqeH [Streptococcus mutans SM4]
Length = 368
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 113/387 (29%), Positives = 192/387 (49%), Gaps = 48/387 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT+ + GY E K + + C RC L H + IT V
Sbjct: 6 CIGCGAQIQTTAKEQAGYTPKSALE---KGLESGKIYCQRCFRLRHYNEITDV------- 55
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
+S D+ + L + +AL+V ++DI DFNGS + ++ ++ ++LV K D+
Sbjct: 56 ----HISDDDFLKLLHEVGDSRALVVNVIDIFDFNGSVIPGLQRFISSSDLLLVGNKADI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W++E ++ L L + LTS+++ I + ++I++ ++GRDVY++G
Sbjct: 112 LPKSVKSGKITQWLMERAHEEGLRPLDLILTSAQNKWAIKELIAKIEELRQGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G+++ S PGTTL I+I G ++DTP
Sbjct: 172 TNVGKSTLINAIIQEITGDKNIITT---------SRFPGTTLDKIEI-PLNDGSYIFDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + + L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLSDKALKYISPKKEIKPKTYQLNPEQ--------------TLFLGGLAR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + T Y +L+++ AD FY K +G LTPP K+ A K
Sbjct: 268 FDYV-TGDQQGFTAYFDNNLKLHRTKLAGADAFYDKHIGSLLTPPDKKEMAAFPK----- 321
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
++ E T + +D+ SGLGWI +
Sbjct: 322 ---LVRHEFTIKEKTDLVFSGLGWIRI 345
>gi|401684247|ref|ZP_10816130.1| ribosome biogenesis GTPase YqeH [Streptococcus sp. BS35b]
gi|400186552|gb|EJO20764.1| ribosome biogenesis GTPase YqeH [Streptococcus sp. BS35b]
Length = 368
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 125/426 (29%), Positives = 200/426 (46%), Gaps = 65/426 (15%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT + G+ E K + V C RC L H + IT V
Sbjct: 6 CIGCGATIQTIDKAGLGFTPQSALE---KGLETGEVYCQRCFRLRHYNEITDVQ------ 56
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ + L + AL+V ++DI DFNGS + + N ++LV K D+
Sbjct: 57 -----LTDDDFLKLLHEVGDSDALVVNVIDIFDFNGSVIPGLPRFVSGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W++E ++ L + V LTS+++ I V +I+ +K RDVY++G
Sbjct: 112 LPKSVKPGKISQWLMERAHEEGLRPVDVVLTSAQNKHAIKEVIDKIEHYRKDRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G+++ S PGTTL I+I G +YDTP
Sbjct: 172 TNVGKSTLINAIIQEITGDQNVITT---------SRFPGTTLDKIEI-PLDDGSYIYDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + A++L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLTAKNLKYVSPKKEIKPKTYQLNPEQ--------------TLFLGGLGR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + F+ L+++ + A FY K LG LTPP K+K D
Sbjct: 268 FDFISGEKQGFTAFFD-NELKLHRTKLESASAFYDKHLGTLLTPPNSKEKE------DFP 320
Query: 460 RLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVEV 519
+L++ F T + +D+ ISGLGWI V +G +AV P+ V V
Sbjct: 321 KLVQHVF--TIKDKTDLVISGLGWIRV-----------------TGTAKVAVWAPEGVAV 361
Query: 520 FVRNPM 525
R +
Sbjct: 362 ITRKAI 367
>gi|227524677|ref|ZP_03954726.1| GTP-binding protein [Lactobacillus hilgardii ATCC 8290]
gi|227088161|gb|EEI23473.1| GTP-binding protein [Lactobacillus hilgardii ATCC 8290]
Length = 378
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 117/393 (29%), Positives = 188/393 (47%), Gaps = 45/393 (11%)
Query: 94 VNSAVASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAV 153
V+ V C GCGA +QT+ DA GY E K Q V C RC L H + I V
Sbjct: 8 VDGEVVHCIGCGAKVQTTNKDALGYTPKSALE---KGLQNGEVYCQRCFRLRHYNEIAPV 64
Query: 154 GGNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIIL 213
+S D+ + L+ + +LIV +VDI D NGS + + G NP++L
Sbjct: 65 S-----------LSDDDFLKLLTSISGTDSLIVYVVDIFDVNGSLIPGLHRFVGDNPVLL 113
Query: 214 VVTKVDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGR 273
V K+D+LP V DW+ + + + V L S+K+ + + +I+K + G+
Sbjct: 114 VGNKLDVLPASIKERKVRDWLRQRANSAGIRPIDVELISAKTNFDVDHLLDQIEKYRDGK 173
Query: 274 DVYILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGG 333
DVY++G NVGKS INA++++ + K S PGTTL I I G
Sbjct: 174 DVYVVGVTNVGKSTLINAVIRQ--------STGIKELITTSRFPGTTLDRIDI-PLNDGH 224
Query: 334 KLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIF 393
+ DTPG+ + A + ++L + PQ ++ + + + E T+F
Sbjct: 225 SIVDTPGIIQPEQMAHHLVGKELNLVTPQKTIKPKIYQLNPEQ--------------TLF 270
Query: 394 WGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGW 453
+GG+ R D + T Y +L ++ + A+ FY+K LG L+PP + + + +
Sbjct: 271 FGGVARFDYDSGDGKHGFTVYAENNLYIHRTKLENAEAFYEKHLGDLLSPP-SENRKDDF 329
Query: 454 KGLDRERLLEIKFEDTERPASDVAISGLGWISV 486
L+R +F+ +++ SDV I GLGW++V
Sbjct: 330 PPLERH-----EFKTSQK--SDVVIEGLGWVTV 355
>gi|449908951|ref|ZP_21794064.1| GTP-binding protein YqeH [Streptococcus mutans OMZ175]
gi|449262015|gb|EMC59473.1| GTP-binding protein YqeH [Streptococcus mutans OMZ175]
Length = 368
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 114/388 (29%), Positives = 191/388 (49%), Gaps = 48/388 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT E + GY K + + C RC L H + IT V
Sbjct: 6 CIGCGAKIQTEEKNRAGYTPKSAL---GKGLESGKIYCQRCFRLRHYNEITDV------- 55
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
+S D+ + L + +AL+V ++DI DFNGS + ++ +N ++LV K D+
Sbjct: 56 ----HISDDDFLKLLHEVGDSRALVVNVIDIFDFNGSVIPGLQRFISSNDLLLVGNKADI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W++E ++ L L + LTS+++ I + ++I++ ++GRDVY++G
Sbjct: 112 LPKSVKSGKITQWLMERAHEEGLRPLDLILTSAQNKWAIKELIAKIEELRQGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G+++ S PGTTL I+I G ++DTP
Sbjct: 172 TNVGKSTLINAIIQEITGDKNIITT---------SRFPGTTLDKIEI-PLNDGSYIFDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + + L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLSDKALKYISPKKEIKPKTYQLNPEQ--------------TLFLGGLAR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + T Y +L+++ AD FY K +G LTPP K+ A K
Sbjct: 268 FDYV-TGDKQGFTAYFDNNLKLHRTKLVGADTFYDKHIGSLLTPPDKKEMAAFPK----- 321
Query: 460 RLLEIKFEDTERPASDVAISGLGWISVE 487
++ E T + +D+ SGLGWI +
Sbjct: 322 ---LVRHEFTIKEKTDLVFSGLGWIRIN 346
>gi|449997466|ref|ZP_21824018.1| GTP-binding protein YqeH [Streptococcus mutans A9]
gi|449181814|gb|EMB83875.1| GTP-binding protein YqeH [Streptococcus mutans A9]
Length = 368
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 113/387 (29%), Positives = 192/387 (49%), Gaps = 48/387 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT+ + GY+ K + + C RC L H + IT V
Sbjct: 6 CIGCGAQIQTTAKEQAGYIPKSAL---GKGLESGKIYCQRCFRLRHYNEITDV------- 55
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
+S D+ + L + +AL+V ++DI DFNGS + ++ +N ++LV K D+
Sbjct: 56 ----HISDDDFLKLLHEVGDSRALVVNVIDIFDFNGSVIPGLQRFISSNDLLLVGNKADI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W++E ++ L L + LTS+++ I + ++I++ ++GRDVY++G
Sbjct: 112 LPKSVKSGKITQWLMERAHEEGLRPLDLILTSAQNKWAIKELIAKIEELRQGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G+++ S PGTTL I+I G ++DTP
Sbjct: 172 TNVGKSTLINAIIQEITGDKNIITT---------SRFPGTTLDKIEI-PLNDGSYIFDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + + L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLSDKALKYISPKKEIKPKTYQLNPEQ--------------TLFLGGLAR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + T Y +L+++ AD FY K +G LTPP K+ A K
Sbjct: 268 FDYV-TGDKQGFTAYFDNNLKLHRTKLAGADAFYDKHIGSLLTPPDKKEMAAFPK----- 321
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
++ E T + +D+ SGLGWI +
Sbjct: 322 ---LVRHEFTIKEKTDLVFSGLGWIRI 345
>gi|417643756|ref|ZP_12293785.1| ribosome biogenesis GTPase YqeH [Staphylococcus warneri VCU121]
gi|445059504|ref|YP_007384908.1| GTPase YqeH [Staphylococcus warneri SG1]
gi|330685473|gb|EGG97127.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU121]
gi|443425561|gb|AGC90464.1| GTPase YqeH [Staphylococcus warneri SG1]
Length = 366
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 131/427 (30%), Positives = 206/427 (48%), Gaps = 70/427 (16%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFK-TVLCGRCRLLSHGHMITAVGGNGGY 159
C GCGAPLQ+ + +APGYV +H+ F+ V+C RC L + + + VG
Sbjct: 7 CIGCGAPLQSEDKNAPGYV--------PEHNLFREDVICKRCFRLKNYNEVQDVG----- 53
Query: 160 AGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVD 219
+ +D+ L+ L +K ++V +VD+ DF GSF+ I+ + G IILV K+D
Sbjct: 54 ------MDSDDFLNLLTGLSDKKGIVVNVVDVFDFEGSFINAIKRIVGNKKIILVANKMD 107
Query: 220 LLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILG 279
LLPK + V +W+ A K L V L S++ GI + I K + DVYI+G
Sbjct: 108 LLPKQINHRRVKEWLKRAAKKYGLEAEDVVLISAEKGQGIEDLLYSINKYRDQEDVYIVG 167
Query: 280 SANVGKSAFINALLK-KMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDT 338
+ NVGKS IN L++ +GE+D S PGTTL I I ++DT
Sbjct: 168 TTNVGKSTLINKLIELSVGEKDVVTT---------SRFPGTTLDMIDI-PLDEKSFMFDT 217
Query: 339 PGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLV 398
PG+ H+ V ++L + P+ ++ + + + NE G T+F+GGL
Sbjct: 218 PGIIQSHQMTHFVTEKELKLIMPKKEIKQRVYQL-------NE-------GQTLFFGGLA 263
Query: 399 RIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDR 458
RID + + F+ L ++ T+KA+E ++ +G LTPP + +
Sbjct: 264 RIDYVSGGKRPLICFFS-NELNIHRTKTEKANELWKNHIGDLLTPPHDPSQ------FNM 316
Query: 459 ERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVE 518
+ ++ E T + DV ISGLG+I+++ + I V VPK V+
Sbjct: 317 SEMKAVRLE-TGKEKRDVMISGLGFITIDAGAKVI-----------------VRVPKNVD 358
Query: 519 VFVRNPM 525
V +RN +
Sbjct: 359 VILRNSI 365
>gi|406659581|ref|ZP_11067719.1| ribosome biogenesis GTPase YqeH [Streptococcus iniae 9117]
gi|405577690|gb|EKB51838.1| ribosome biogenesis GTPase YqeH [Streptococcus iniae 9117]
Length = 372
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 117/393 (29%), Positives = 187/393 (47%), Gaps = 46/393 (11%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG +Q+ + GY + K + C RC L H + IT V
Sbjct: 6 CIGCGVEIQSDNKEKMGYTPTAAID---KGLAAGELYCQRCFRLRHYNEITDV------- 55
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
+S DE + L + AL+V ++DI DFNGS + + N ++LV K D+
Sbjct: 56 ----HISDDEFLKLLHEVGDSDALVVNVIDIFDFNGSVIPGLSRFVSGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK V W++E ++ L + V LTS+++ I + +I + +KGRDVY++G
Sbjct: 112 LPKSVKDGKVSQWLIERAHEEGLRPVDVILTSAQNKYAIKELIEKINQLRKGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS INA+++++ K S PGTTL I+I G ++DTPG
Sbjct: 172 TNVGKSTLINAIIQEVS--------GDKEVITTSRFPGTTLDKIEI-PLDDGTFIFDTPG 222
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ H+ A + +DL ++P ++ +++ + E T+F+GGL R
Sbjct: 223 IIHRHQMAHYLTDKDLKIVSPSKEIKPKTYQLNPEQ--------------TLFFGGLGRF 268
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D + +T Y +L ++ +KADEFY K LG LTPP +QK + + L
Sbjct: 269 DFISG-QRQGITAYFDNNLDLHRTKLEKADEFYLKHLGGLLTPPNMEQKNK-FPAL---- 322
Query: 461 LLEIKFEDTERPASDVAISGLGWISVEPVRRSI 493
+ +E + D+ SGLGWI + + ++
Sbjct: 323 ---VPYEFVVKDKIDLVFSGLGWIKINGSKDNV 352
>gi|386053744|ref|YP_005971302.1| ribosome biogenesis GTPase YqeH [Listeria monocytogenes Finland
1998]
gi|346646395|gb|AEO39020.1| ribosome biogenesis GTPase YqeH [Listeria monocytogenes Finland
1998]
Length = 366
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 116/386 (30%), Positives = 183/386 (47%), Gaps = 50/386 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT + D GY K + V+C RC L H + I V
Sbjct: 7 CIGCGAVIQTEDPDKIGYA-------PKSSLNNEQVICKRCFRLKHYNEIQDVA------ 53
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ L+ + ++ALIV +VDI DF+GS+L + AG+NP++LV K D+
Sbjct: 54 -----LTDDDFLRILNQISSKQALIVYVVDIFDFDGSWLPGLPRFAGSNPVLLVGNKEDV 108
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + + W+ ++ L V L S++ G + +I + + G+DVY++G
Sbjct: 109 LPKSLKRDKLTRWMRTRAKEQGLAATDVVLVSAEKGHGFDTLLEKIDELRNGQDVYVVGC 168
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS IN ++K+ + +Q PGTTL I+I G L DTPG
Sbjct: 169 TNVGKSTLINRIIKQASGENNVITTSQ--------FPGTTLDKIEI-PLADGNVLVDTPG 219
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ HH+ A + L A+ P+ ++ F + E T+F G L R+
Sbjct: 220 IINHHQMAHFIDTTTLKAITPKKEVKPAVFQLNEEQ--------------TLFLGALARL 265
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D + L Y +L ++ +KA+ Y+K+ G+ L PP EG K L +
Sbjct: 266 DYVSG-GRKSLVVYVSNNLPIHRTKLEKAEALYEKQAGLVLQPP----TEEGMKTL--PK 318
Query: 461 LLEIKFEDTERPASDVAISGLGWISV 486
L+ F T + +D+ SGLGW+++
Sbjct: 319 LVPYSF--TVKEKADIVFSGLGWVTI 342
>gi|404413570|ref|YP_006699157.1| GTPase [Listeria monocytogenes SLCC7179]
gi|404239269|emb|CBY60670.1| putative GTPase [Listeria monocytogenes SLCC7179]
Length = 366
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 116/386 (30%), Positives = 183/386 (47%), Gaps = 50/386 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT + D GY K + V+C RC L H + I V
Sbjct: 7 CIGCGAVIQTEDPDKIGYA-------PKSSLNNEQVICKRCFRLKHYNEIQDVA------ 53
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ L+ + ++ALIV +VDI DF+GS+L + AG+NP++LV K D+
Sbjct: 54 -----LTDDDFLRILNQISSKQALIVYVVDIFDFDGSWLPGLPRFAGSNPVLLVGNKEDV 108
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + + W+ ++ L V L S++ G + +I + + G+DVY++G
Sbjct: 109 LPKSLKRDKLTRWMRTRAKEQGLAATDVVLVSAEKGHGFDTLLEKIDELRNGQDVYVVGC 168
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS IN ++K+ + +Q PGTTL I+I G L DTPG
Sbjct: 169 TNVGKSTLINRIIKQASGENNVITTSQ--------FPGTTLDKIEI-PLADGNVLVDTPG 219
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ HH+ A + L A+ P+ ++ F + E T+F G L R+
Sbjct: 220 IINHHQMAHFIDTTTLKAITPKKEVKPAVFQLNEEQ--------------TLFLGALARL 265
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D + L Y +L ++ +KA+ Y+K+ G+ L PP EG K L +
Sbjct: 266 DYVSG-GRKSLVVYVSNNLPIHRTKLEKAEALYEKQAGLVLQPP----TEEGMKTL--PK 318
Query: 461 LLEIKFEDTERPASDVAISGLGWISV 486
L+ F T + +D+ SGLGW+++
Sbjct: 319 LVPYSF--TVKEKADIVFSGLGWVTI 342
>gi|450137692|ref|ZP_21871776.1| GTP-binding protein YqeH [Streptococcus mutans NLML1]
gi|449234970|gb|EMC33952.1| GTP-binding protein YqeH [Streptococcus mutans NLML1]
Length = 368
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 114/387 (29%), Positives = 193/387 (49%), Gaps = 48/387 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT+ + GY E K + + C RC L H + IT V
Sbjct: 6 CIGCGAQIQTTAKEQAGYTPKSALE---KGLESGKIYCQRCFRLRHYNEITDV------- 55
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
+S D+ + L + +AL+V ++DI DFNGS + ++ ++ ++LV K D+
Sbjct: 56 ----HISDDDFLKLLHEVGDSRALVVNVIDIFDFNGSVIPGLQRFISSSDLLLVGNKADI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W++E ++ L L + LTS+++ I + ++I++ ++GRDVY++G
Sbjct: 112 LPKSVKSGKITQWLMERAHEEGLRPLDLILTSAQNKWAIKELIAKIEELRQGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G+++ S PGTTL I+I G ++DTP
Sbjct: 172 TNVGKSTLINAIIQEITGDKNIITT---------SRFPGTTLDKIEI-PLNDGSYIFDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + + L ++P+ ++ +++ + E T+F GGLVR
Sbjct: 222 GIIHCHQMAHYLSDKALKYISPKKEIKPKTYQLNPEQ--------------TLFLGGLVR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + T Y +L+++ AD FY K +G LTPP K+ A K
Sbjct: 268 FDYV-TGDKQGFTAYFDNNLKLHRTKLAGADAFYDKHIGSLLTPPDKKEMAAFPK----- 321
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
++ E T + +D+ SGLGWI +
Sbjct: 322 ---LVRHEFTIKEKTDLVFSGLGWIRI 345
>gi|450175542|ref|ZP_21885246.1| GTP-binding protein YqeH [Streptococcus mutans SM1]
gi|449246628|gb|EMC44927.1| GTP-binding protein YqeH [Streptococcus mutans SM1]
Length = 368
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 113/387 (29%), Positives = 192/387 (49%), Gaps = 48/387 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT+ + GY E K + + C RC L H + IT V
Sbjct: 6 CIGCGAQIQTTAKEQAGYTPKSALE---KGLESGKIYCQRCFRLRHYNEITDV------- 55
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
+S D+ + L + +AL+V ++DI DFNGS + ++ ++ ++LV K D+
Sbjct: 56 ----HISDDDFLKLLHEVGDSRALVVNVIDIFDFNGSVIPGLQRFISSSDLLLVGNKADI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W++E ++ L L + LTS+++ I + ++I++ ++GRDVY++G
Sbjct: 112 LPKSVKSGKITQWLMERAHEEGLRPLDLILTSAQNKWAIKELIAKIEELRQGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G+++ S PGTTL I+I G ++DTP
Sbjct: 172 TNVGKSTLINAIIQEITGDKNIITT---------SRFPGTTLDKIEI-PLNDGSYIFDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + + L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLSDKALKYISPKKEIKPKTYQLNPEQ--------------TLFLGGLAR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + T Y +L+++ AD FY K +G LTPP K+ A K
Sbjct: 268 FDYV-TGDKQGFTAYFDNNLKLHRTKLAGADAFYDKHIGSLLTPPDKKEMAAFPK----- 321
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
++ E T + +D+ SGLGWI +
Sbjct: 322 ---LVRHEFTIKEKTDLVFSGLGWIRI 345
>gi|450145066|ref|ZP_21874391.1| GTP-binding protein YqeH [Streptococcus mutans 1ID3]
gi|449149787|gb|EMB53574.1| GTP-binding protein YqeH [Streptococcus mutans 1ID3]
Length = 368
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 113/387 (29%), Positives = 192/387 (49%), Gaps = 48/387 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT+ + GY E K + + C RC L H + IT V
Sbjct: 6 CIGCGAQIQTTAKEQAGYTPKSALE---KGLESGKIYCQRCFRLRHYNEITDV------- 55
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
+S D+ + L + +AL+V ++DI DFNGS + ++ ++ ++LV K D+
Sbjct: 56 ----HISDDDFLKLLHEVGDSRALVVNVIDIFDFNGSVIPGLQRFISSSDLLLVGNKADI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W++E ++ L L + LTS+++ I + ++I++ ++GRDVY++G
Sbjct: 112 LPKSVKSGKITQWLMERAHEEGLRPLDLILTSAQNKWAIKELIAKIEELRQGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G+++ S PGTTL I+I G ++DTP
Sbjct: 172 TNVGKSTLINAIIQEITGDKNIITT---------SRFPGTTLDKIEI-PLNDGSYIFDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + + L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLSDKALKYISPKKEIKPKTYQLNPEQ--------------TLFLGGLAR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + T Y +L+++ AD FY K +G LTPP K+ A K
Sbjct: 268 FDYV-TGDKQGFTAYFDNNLKLHRTKLAGADAFYDKHIGSLLTPPDKKEMAAFPK----- 321
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
++ E T + +D+ SGLGWI +
Sbjct: 322 ---LVRHEFTIKEKTDLVFSGLGWIRI 345
>gi|403061018|ref|YP_006649234.1| GTPase YqeH [Streptococcus suis S735]
gi|402808344|gb|AFQ99835.1| GTPase YqeH [Streptococcus suis S735]
Length = 368
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 117/387 (30%), Positives = 184/387 (47%), Gaps = 48/387 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT + G+ E K + + C RC L H + I+ V
Sbjct: 6 CIGCGAQIQTLDKAVAGFTPQSALE---KGLETGQLYCQRCFRLRHYNEISDVN------ 56
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
+S D+ + L + AL+V ++DI DFNGS + + N ++LV K D+
Sbjct: 57 -----ISDDDFLKLLHSVGESDALVVNVIDIFDFNGSVIPGLPRFISGNDVLLVGNKQDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK V W+ E + + + V LTS+++ I + +I++ +KGRDVY++G
Sbjct: 112 LPKSVKTGKVTQWLTERAHEIGMRPVDVVLTSAQNKQAIKDLIEKIEQHRKGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G++D S PGTTL I+I G +YDTP
Sbjct: 172 TNVGKSTLINAIIQEITGDKDVITT---------SRFPGTTLDKIEI-PLDDGSYIYDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + A++L ++P+ ++ +++ + E T+F GL R
Sbjct: 222 GIIHRHQMAHYLTAKNLKYISPRKEIKPKTYQLNPEQ--------------TLFLAGLGR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + F+ LQ++ A EFYQK G L PP K+ E
Sbjct: 268 FDFVAGERKGFTAFFD-NELQLHRTKLQGASEFYQKHAGSLLVPPTSKELKE------FP 320
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
L+ +F E+ +DV SGLGWI V
Sbjct: 321 ELVRHEFTINEK--TDVVFSGLGWIRV 345
>gi|340354705|ref|ZP_08677406.1| GTP-binding protein [Sporosarcina newyorkensis 2681]
gi|339623104|gb|EGQ27610.1| GTP-binding protein [Sporosarcina newyorkensis 2681]
Length = 371
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 125/429 (29%), Positives = 190/429 (44%), Gaps = 65/429 (15%)
Query: 94 VNSAVASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAV 153
VN C GCG +QT++ A G+ P + E + V+C RC L + + + V
Sbjct: 4 VNLESIKCIGCGIAIQTTDKTAEGFAPPSSLEKED-------VICQRCFKLRNYNELQPV 56
Query: 154 GGNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIIL 213
+S D+ L+ + + LIVK+VDI DFNGS++ + G I+L
Sbjct: 57 S-----------LSGDDFLAILNGIGEKDGLIVKVVDIFDFNGSWINGLHRFVGKKDILL 105
Query: 214 VVTKVDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGR 273
+ K D+LPK + V +W+ K L + V L S+ G+ I+ +KG+
Sbjct: 106 IGNKSDILPKSINPKRVTNWMKAEAAKLGLKPIDVLLVSAVKGTGMSEALDAIETYRKGK 165
Query: 274 DVYILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGG 333
DVY++G NVGKS FIN ++K A + S PGTTL ++I G
Sbjct: 166 DVYVVGCTNVGKSTFINRIIKD--------ATGVQDVITTSYFPGTTLDVVEI-PLDDGK 216
Query: 334 KLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIF 393
L DTPG+ H+ A + A+DL + P+ L+ + + + +E T+F
Sbjct: 217 SLMDTPGIINDHQIAHDLDAKDLKLITPKKELKPKVYQLNAEQ--------------TLF 262
Query: 394 WGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGW 453
GGL R D + + Y L ++ + ADE Y LG L+PP E
Sbjct: 263 IGGLARFDFIAG-DRSSFNIYVANGLPLHRTKLENADELYLNHLGDMLSPP-SAASLEKL 320
Query: 454 KGLDRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHV 513
L R + +DV ISGLGWI+++ ++ +AVH
Sbjct: 321 PPLVRHEF------SIKEAKTDVVISGLGWITIQ----------------HADVQVAVHA 358
Query: 514 PKPVEVFVR 522
PK V V +R
Sbjct: 359 PKGVNVIIR 367
>gi|392531382|ref|ZP_10278519.1| GTPase YqeH [Carnobacterium maltaromaticum ATCC 35586]
Length = 377
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 126/389 (32%), Positives = 185/389 (47%), Gaps = 47/389 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT+ GY E K + V C RC L H + I V
Sbjct: 14 CIGCGAVIQTNAPGELGYTPVSALE---KGLENGEVYCQRCFRLRHYNEIQDV------- 63
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
Q D LR L+ + E ALIV ++DI DFNGS + + G NP++LV KVDL
Sbjct: 64 ---QLTDDDFLR-LLNEIGAEDALIVNVIDIFDFNGSLIPGLHRFVGNNPVLLVGNKVDL 119
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LP + W+ E ++ L V LTS+ + + I+K ++GRDV+++G
Sbjct: 120 LPHSLKRGKMTQWLRERAHEEGLRPKDVILTSAMKPKEMDDLLKTIEKYREGRDVFVVGV 179
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS IN ++K A +A S PGTTL I+I G L DTPG
Sbjct: 180 TNVGKSTLINQIIKN------TAGVADVI--TTSQFPGTTLDRIEI-PLDDGKSLIDTPG 230
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ H+ A V+ +DL +AP+ ++ + + NE G T+F+GG+ R
Sbjct: 231 IIHRHQMAHVLGDKDLKLIAPKKEIKPMVYQL-------NE-------GQTLFFGGVARF 276
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D ++ T Y L+++ +KADE Y +G L PP K + + L
Sbjct: 277 DYIQG-GRRSFTCYTSNDLKIHRTKLEKADELYANHVGEMLQPP-RKDEVGNFPEL---- 330
Query: 461 LLEIKFEDTERPASDVAISGLGWISV-EP 488
++FE + + SD+ +GLGW++V EP
Sbjct: 331 ---VRFEFSVKERSDIVFAGLGWVTVNEP 356
>gi|450044471|ref|ZP_21837871.1| GTP-binding protein YqeH [Streptococcus mutans N34]
gi|449201640|gb|EMC02626.1| GTP-binding protein YqeH [Streptococcus mutans N34]
Length = 368
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 113/387 (29%), Positives = 192/387 (49%), Gaps = 48/387 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT+ + GY E K + + C RC L H + IT V
Sbjct: 6 CIGCGAQIQTTAKEQAGYTPKSALE---KGLESGKIYCQRCFRLRHYNEITDV------- 55
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
+S D+ + L + +AL+V ++DI DFNGS + ++ ++ ++LV K D+
Sbjct: 56 ----HISDDDFLKLLHEVGDSRALVVNVIDIFDFNGSVIPGLQRFISSSDLLLVGNKADI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W++E ++ L L + LTS+++ I + ++I + ++GRDVY++G
Sbjct: 112 LPKSVKSVKITQWLMERAHEEGLRPLDLILTSAQNKWAIKELIAKIDELRQGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G+++ S PGTTL I+I G ++DTP
Sbjct: 172 TNVGKSTLINAIIQEITGDKNIITT---------SRFPGTTLDKIEI-PLNDGSYIFDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + + L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLSDKALKYISPKKEIKPKTYQLNPEQ--------------TLFLGGLAR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + T Y +L+++ +AD FY K +G LTPP K+ A K
Sbjct: 268 FDYV-TGDKQGFTAYFDNNLKLHRTKLARADAFYDKHIGSLLTPPDKKEMAAFPK----- 321
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
++ E T + +D+ SGLGWI +
Sbjct: 322 ---LVRHEFTIKEKTDLVFSGLGWIRI 345
>gi|418576003|ref|ZP_13140150.1| GTP-binding protein YqeH [Staphylococcus saprophyticus subsp.
saprophyticus KACC 16562]
gi|418576029|ref|ZP_13140175.1| GTP-binding protein YqeH [Staphylococcus saprophyticus subsp.
saprophyticus KACC 16562]
gi|379325091|gb|EHY92223.1| GTP-binding protein YqeH [Staphylococcus saprophyticus subsp.
saprophyticus KACC 16562]
gi|379325751|gb|EHY92882.1| GTP-binding protein YqeH [Staphylococcus saprophyticus subsp.
saprophyticus KACC 16562]
Length = 368
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 133/433 (30%), Positives = 211/433 (48%), Gaps = 72/433 (16%)
Query: 96 SAVASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGG 155
+ + C GCGAPLQ+ +SDAPGYV P++ K+ V+C RC L + + + VG
Sbjct: 4 TEILKCIGCGAPLQSEDSDAPGYV-PESSLYKED------VICKRCFRLKNYNEVQDVG- 55
Query: 156 NGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVV 215
+ +++ L+ L +K ++V +VD+ DF GSF+ I+ + G IILV
Sbjct: 56 ----------LDSEDFLNLLNGLADKKGIVVNVVDVFDFEGSFINAIKRIVGNKQIILVG 105
Query: 216 TKVDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDV 275
K+DLLPK + V +W+ + K L+ V L S++ GI + + I + DV
Sbjct: 106 NKLDLLPKQINKRRVKEWLKKTARKYGLDAEDVILISAEKNEGIEDLLNAINTLRNNDDV 165
Query: 276 YILGSANVGKSAFINALLKK-MGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGK 334
YI+G+ NVGKS IN L+++ +GE++ S PGTTL I I
Sbjct: 166 YIVGTTNVGKSTLINKLIERSVGEKNVVTT---------SRFPGTTLDMIDI-PLDDTSF 215
Query: 335 LYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFW 394
+YDTPGV H+ V ++L + P+ ++ + + + NE G T+F+
Sbjct: 216 MYDTPGVIQEHQMTHYVTEKELKTIMPKKEVKQRVYQL-------NE-------GQTLFF 261
Query: 395 GGLVRIDLLK--VLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEG 452
GGL RID + P C Y L ++ T+ A+E ++ +LG L+PP
Sbjct: 262 GGLARIDYISGGKRPLVC---YFSNDLNIHRTKTENANELWRNQLGDVLSPP------NN 312
Query: 453 WKGLDRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVH 512
D + + ++ E T + DV ISGLG+I+++ + I V
Sbjct: 313 PDHFDLQNVKAVRLE-TGKEKRDVMISGLGFITIDEGAKII-----------------VR 354
Query: 513 VPKPVEVFVRNPM 525
VPK V+V +RN +
Sbjct: 355 VPKNVDVVLRNSI 367
>gi|339623958|ref|ZP_08659747.1| GTPase YqeH [Fructobacillus fructosus KCTC 3544]
Length = 388
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 130/429 (30%), Positives = 203/429 (47%), Gaps = 70/429 (16%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT++ GY+ + K + + +LC RC L H + I V
Sbjct: 25 CIGCGARMQTTDQQEAGYLPMSALQ---KQLESEQLLCQRCFRLRHYNEIQPVS------ 75
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGA-NPIILVVTKVD 219
++ D+ + L + KALIV ++D+ DF+GS + + G NPI L+ KVD
Sbjct: 76 -----LTDDDFIKLLHQVSESKALIVYVLDLFDFSGSTIPGLPRFVGQDNPIYLIGNKVD 130
Query: 220 LLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILG 279
LLPK N + DWV + + ++V LTS+ A + + +I + + GRDVY++G
Sbjct: 131 LLPKSLKANKIKDWVRGQLKDQGIKPVAVDLTSAAHPANLDAILDKIDELRAGRDVYVVG 190
Query: 280 SANVGKSAFINALLK-KMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDT 338
+ NVGKS IN ++K K G ++ S PGTTL I I G L DT
Sbjct: 191 TTNVGKSTLINQIIKSKTGVQELITT---------SRFPGTTLDQIAI-PLDDGRSLIDT 240
Query: 339 PGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLV 398
PG+ + A V +DL + P++ ++ +++ + +G T+F GGL
Sbjct: 241 PGIIKADQYAHQVTDKDLKYVLPKNEIKARTYQLN--------------DGQTVFIGGLA 286
Query: 399 RIDLLKVLPE--TCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGL 456
R DL+ L + T +TFY +L ++ ADEFY+K G LT P+ K G
Sbjct: 287 RFDLITGLEDAKTGVTFYFENNLNLHRTKLVGADEFYEKHQGGLLT-PVPKSADSGL--- 342
Query: 457 DRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKP 516
I E + A+D+ I+GLG+I++ P +++ + P
Sbjct: 343 -------ISHEFKTKTAADLVIAGLGFITL-PAGVTVKG----------------YAPTG 378
Query: 517 VEVFVRNPM 525
V VF+R M
Sbjct: 379 VSVFLRKAM 387
>gi|290579863|ref|YP_003484255.1| GTP-binding protein [Streptococcus mutans NN2025]
gi|449971650|ref|ZP_21814481.1| GTP-binding protein YqeH [Streptococcus mutans 2VS1]
gi|450029763|ref|ZP_21832865.1| GTP-binding protein YqeH [Streptococcus mutans G123]
gi|450057387|ref|ZP_21842554.1| GTP-binding protein YqeH [Streptococcus mutans NLML4]
gi|450163520|ref|ZP_21880832.1| GTP-binding protein YqeH [Streptococcus mutans B]
gi|254996762|dbj|BAH87363.1| putative GTP-binding protein [Streptococcus mutans NN2025]
gi|449171756|gb|EMB74404.1| GTP-binding protein YqeH [Streptococcus mutans 2VS1]
gi|449193955|gb|EMB95324.1| GTP-binding protein YqeH [Streptococcus mutans G123]
gi|449205315|gb|EMC06067.1| GTP-binding protein YqeH [Streptococcus mutans NLML4]
gi|449242684|gb|EMC41244.1| GTP-binding protein YqeH [Streptococcus mutans B]
Length = 368
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 113/387 (29%), Positives = 192/387 (49%), Gaps = 48/387 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT+ + GY E K + + C RC L H + IT V
Sbjct: 6 CIGCGAQIQTTAKEQAGYTPKSALE---KGLESGKIYCQRCFRLRHYNEITDV------- 55
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
+S D+ + L + +AL+V ++DI DFNGS + ++ ++ ++LV K D+
Sbjct: 56 ----HISDDDFLKLLHEVGDSRALVVNVIDIFDFNGSVIPGLQRFISSSDLLLVGNKADI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W++E ++ L L + LTS+++ I + ++I++ ++GRDVY++G
Sbjct: 112 LPKSVKSGKITQWLMERAHEEGLRPLDLILTSAQNKWAIKELIAKIEELRQGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G+++ S PGTTL I+I G ++DTP
Sbjct: 172 TNVGKSTLINAIIQEITGDKNIITT---------SRFPGTTLDKIEI-PLNDGSYIFDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + + L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLSDKALKYISPKKEIKPKTYQLNPEQ--------------TLFLGGLAR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + T Y +L+++ AD FY K +G LTPP K+ A K
Sbjct: 268 FDYV-TGDKQGFTAYFDNNLKLHRTKLAGADTFYDKHIGSLLTPPDKKEMAAFPK----- 321
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
++ E T + +D+ SGLGWI +
Sbjct: 322 ---LVRHEFTIKEKTDLVFSGLGWIRI 345
>gi|227510525|ref|ZP_03940574.1| GTP-binding protein [Lactobacillus brevis subsp. gravesensis ATCC
27305]
gi|227190177|gb|EEI70244.1| GTP-binding protein [Lactobacillus brevis subsp. gravesensis ATCC
27305]
Length = 378
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 117/393 (29%), Positives = 188/393 (47%), Gaps = 45/393 (11%)
Query: 94 VNSAVASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAV 153
V+ V C GCGA +QT+ DA GY E K Q V C RC L H + I V
Sbjct: 8 VDGEVVHCIGCGAKVQTTNKDALGYTPKSALE---KGLQNGEVYCQRCFRLRHYNEIAPV 64
Query: 154 GGNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIIL 213
+S D+ + L+ + +LIV +VDI D NGS + + G NP++L
Sbjct: 65 S-----------LSDDDFLKLLTSISGTDSLIVYVVDIFDVNGSLIPGLHRFVGDNPVLL 113
Query: 214 VVTKVDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGR 273
V K+D+LP V DW+ + + + V L S+K+ + + +I+K + G+
Sbjct: 114 VGNKLDVLPASIKERKVRDWLRQRANAAGIRPIDVELISAKTNFDVDHLLDQIEKYRDGK 173
Query: 274 DVYILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGG 333
DVY++G NVGKS INA++++ + K S PGTTL I I G
Sbjct: 174 DVYVVGVTNVGKSTLINAVIRQ--------STGIKELITTSRFPGTTLDRIDI-PLNDGH 224
Query: 334 KLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIF 393
+ DTPG+ + A + ++L + PQ ++ + + + E T+F
Sbjct: 225 SIVDTPGIIQPEQMAHHLVGKELNLVTPQKTIKPKIYQLNPEQ--------------TLF 270
Query: 394 WGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGW 453
+GG+ R D + T Y +L ++ + A+ FY+K LG L+PP + + + +
Sbjct: 271 FGGVARFDYDSGDGKHGFTVYAENNLYIHRTKLENAEAFYEKHLGDLLSPP-SENRKDDF 329
Query: 454 KGLDRERLLEIKFEDTERPASDVAISGLGWISV 486
L+R +F+ +++ SDV I GLGW++V
Sbjct: 330 PPLERH-----EFKTSQK--SDVVIEGLGWVTV 355
>gi|449897616|ref|ZP_21790107.1| GTP-binding protein YqeH [Streptococcus mutans R221]
gi|449261150|gb|EMC58634.1| GTP-binding protein YqeH [Streptococcus mutans R221]
Length = 368
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 113/387 (29%), Positives = 192/387 (49%), Gaps = 48/387 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT+ + GY E K + + C RC L H + IT V
Sbjct: 6 CIGCGAQIQTTAKEQAGYTPKSALE---KGLESGKIYCQRCFRLRHYNEITDV------- 55
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
+S D+ + L + +AL+V ++DI DFNGS + ++ ++ ++LV K D+
Sbjct: 56 ----HISDDDFLKLLHEVGDSRALVVNVIDIFDFNGSVIPGLQRFISSSDLLLVGNKADI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W++E ++ L L + LTS+++ I + ++I++ ++GRDVY++G
Sbjct: 112 LPKSVKSGKITQWLMERAHEEGLRPLDLILTSAQNKWAIKELIAKIEELRQGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G+++ S PGTTL I+I G ++DTP
Sbjct: 172 TNVGKSTLINAIIQEITGDKNIITT---------SRFPGTTLDKIEI-PLNDGSYIFDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + + L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLSDKALKYISPKKEIKPKTYQLNPEQ--------------TLFLGGLAR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + T Y +L+++ AD FY K +G LTPP K+ A K
Sbjct: 268 FDYV-TGNKQGFTAYFDNNLKLHRTKLAGADAFYDKHIGSLLTPPDKKEMAAFPK----- 321
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
++ E T + +D+ SGLGWI +
Sbjct: 322 ---LVRHEFTIKEKTDLVFSGLGWIRI 345
>gi|449982204|ref|ZP_21818184.1| GTP-binding protein YqeH [Streptococcus mutans 5SM3]
gi|450036899|ref|ZP_21835667.1| GTP-binding protein YqeH [Streptococcus mutans M21]
gi|450107703|ref|ZP_21861140.1| GTP-binding protein YqeH [Streptococcus mutans SF14]
gi|450110540|ref|ZP_21862154.1| GTP-binding protein YqeH [Streptococcus mutans SM6]
gi|450160189|ref|ZP_21879859.1| GTP-binding protein YqeH [Streptococcus mutans 66-2A]
gi|449175079|gb|EMB77524.1| GTP-binding protein YqeH [Streptococcus mutans 5SM3]
gi|449193095|gb|EMB94490.1| GTP-binding protein YqeH [Streptococcus mutans M21]
gi|449221545|gb|EMC21314.1| GTP-binding protein YqeH [Streptococcus mutans SF14]
gi|449225021|gb|EMC24640.1| GTP-binding protein YqeH [Streptococcus mutans SM6]
gi|449240379|gb|EMC39058.1| GTP-binding protein YqeH [Streptococcus mutans 66-2A]
Length = 368
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 113/387 (29%), Positives = 192/387 (49%), Gaps = 48/387 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT+ + GY E K + + C RC L H + IT V
Sbjct: 6 CIGCGAQIQTTAKEQAGYTPKSALE---KGLESGKIYCQRCFRLRHYNEITDV------- 55
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
+S D+ + L + +AL+V ++DI DFNGS + ++ ++ ++LV K D+
Sbjct: 56 ----HISDDDFLKLLHEVGDSRALVVNVIDIFDFNGSVIPGLQRFISSSDLLLVGNKADI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W++E ++ L L + LTS+++ I + ++I++ ++GRDVY++G
Sbjct: 112 LPKSVKSGKITQWLMERAHEEGLRPLDLILTSAQNKWAIKELIAKIEELRQGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G+++ S PGTTL I+I G ++DTP
Sbjct: 172 TNVGKSTLINAIIQEITGDKNIITT---------SRFPGTTLDKIEI-PLNDGSYIFDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + + L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLSDKALKYISPKKEIKPKTYQLNPEQ--------------TLFLGGLAR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + T Y +L+++ AD FY K +G LTPP K+ A K
Sbjct: 268 FDYV-TGDKQGFTAYFDNNLKLHRTKLAGADAFYDKHIGSLLTPPDKKEMAAFPK----- 321
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
++ E T + +D+ SGLGWI +
Sbjct: 322 ---LVRHEFTIKEKTDLVFSGLGWIRI 345
>gi|417091550|ref|ZP_11956427.1| GTP-binding protein YqeH [Streptococcus suis R61]
gi|353533158|gb|EHC02825.1| GTP-binding protein YqeH [Streptococcus suis R61]
Length = 368
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 117/387 (30%), Positives = 184/387 (47%), Gaps = 48/387 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT + G+ E K + + C RC L H + I+ V
Sbjct: 6 CIGCGAQIQTLDKAVAGFTPQSALE---KGLETGQLYCQRCFRLRHYNEISDVN------ 56
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
+S D+ + L + AL+V ++DI DFNGS + + N ++LV K D+
Sbjct: 57 -----ISDDDFLKLLHSVGESDALVVNVIDIFDFNGSVIPGLPRFISGNDVLLVGNKQDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK V W+ E + + + V LTS+++ I + +I++ +KGRDVY++G
Sbjct: 112 LPKSVKTGKVTQWLTERAHEIGMRPVDVVLTSAQNKQAIKDLIEKIEQYRKGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G++D S PGTTL I+I G +YDTP
Sbjct: 172 TNVGKSTLINAIIQEITGDKDVITT---------SRFPGTTLDKIEI-PLDDGSYIYDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + A++L ++P+ ++ +++ + E T+F GL R
Sbjct: 222 GIIHRHQMAHYLTAKNLKYISPRKEIKPKTYQLNPEQ--------------TLFLAGLGR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + F+ LQ++ A EFYQK G L PP K+ E
Sbjct: 268 FDFVAGERQGFTAFFD-NELQLHRTKLQGASEFYQKHAGSLLVPPTSKELKE------FP 320
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
L+ +F E+ +DV SGLGWI V
Sbjct: 321 ELVRHEFTINEK--TDVVFSGLGWIRV 345
>gi|157931839|gb|ABW04999.1| GTP-binding protein [Lactobacillus reuteri]
Length = 375
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 119/385 (30%), Positives = 180/385 (46%), Gaps = 46/385 (11%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG+ +QT + + GY E K+ + + C RC L H + I V
Sbjct: 13 CIGCGSIIQTEDPNGLGYTPKSALERGKETGE---LYCQRCFRLRHYNEIAPVS------ 63
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ L+ +R ALIV +VD+ DFNGS + + G NP++LV K DL
Sbjct: 64 -----LTDDDFLRLLNQIRDANALIVYVVDVFDFNGSLIPGLHRFVGDNPVLLVGNKEDL 118
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LP+ + DW+ + L + L S+K I + I+K + RDVY++G
Sbjct: 119 LPRSLRRPKLTDWIRQQANIAGLRPIDTVLVSAKKNHQIDHLLDVIEKYRHNRDVYVVGV 178
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS IN ++K+ K S PGTTL I+I G L DTPG
Sbjct: 179 TNVGKSTLINQIIKQ--------RTGVKELITTSRFPGTTLDKIEI-PLDDGHVLVDTPG 229
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ + A V+ +DL +APQ ++ +++ + +G T+F GG+ R
Sbjct: 230 IIHQEQMAHVLSPKDLKIVAPQKEIKPKTYQLN--------------DGQTLFLGGVARF 275
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D L + Y +L ++ AD FY K LG LTPP +K +G+ L+R
Sbjct: 276 DYLHG-ERAGMVAYFDNNLPIHRTKLSNADNFYAKHLGDLLTPPTSDEK-DGFPPLER-- 331
Query: 461 LLEIKFEDTERPASDVAISGLGWIS 485
+F TE+ SD+ G+GWI+
Sbjct: 332 ---YEFHITEK--SDIVFEGVGWIT 351
>gi|238854460|ref|ZP_04644799.1| ribosome biogenesis GTPase YqeH [Lactobacillus jensenii 269-3]
gi|260665492|ref|ZP_05866339.1| ribosome biogenesis GTPase YqeH [Lactobacillus jensenii SJ-7A-US]
gi|313471824|ref|ZP_07812316.1| ribosome biogenesis GTPase YqeH [Lactobacillus jensenii 1153]
gi|238832887|gb|EEQ25185.1| ribosome biogenesis GTPase YqeH [Lactobacillus jensenii 269-3]
gi|239530132|gb|EEQ69133.1| ribosome biogenesis GTPase YqeH [Lactobacillus jensenii 1153]
gi|260560760|gb|EEX26737.1| ribosome biogenesis GTPase YqeH [Lactobacillus jensenii SJ-7A-US]
Length = 369
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 121/388 (31%), Positives = 185/388 (47%), Gaps = 50/388 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA LQ+ + + G++ P + K + K + C RC L H I V
Sbjct: 7 CIGCGAILQSEDENEAGFL-PASALNKALDGEDKEIYCKRCFRLRHYSEIMPV------- 58
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
+ + D LR L+ L +KALIV +VD+ DFN S + ++ G N ILV KVDL
Sbjct: 59 ---ELNNNDFLR-LLNSLGDKKALIVNVVDLFDFNNSLIPSLKRFVGNNDFILVGNKVDL 114
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
P + + + DW+ + + L + L S+ + + + + + + +DVY +G+
Sbjct: 115 FPLNSKESKIKDWMRQEANRMGLYPKDIFLISAAKKRNLQDLITYLDQASQDQDVYFVGT 174
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS IN+++ MG+ K S PGTTL I+I G L DTPG
Sbjct: 175 TNVGKSTLINSIIDLMGD--------VKDLITTSRFPGTTLDQIKI-PLDSGHYLVDTPG 225
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ + A+ ++A+DL +AP+ L+ ++ + S G T+F GGL RI
Sbjct: 226 IMTEKQLASYLNAKDLDLIAPKKPLKPATYQLNS--------------GQTLFLGGLGRI 271
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D + +T T Y + L V+ T AD+FY+K +G LTPP G + KG
Sbjct: 272 DFISG-KKTSFTVYTARGLYVHRTKTTNADDFYEKHVGDLLTPPHGDENLPAMKG----- 325
Query: 461 LLEIKFEDTERPA--SDVAISGLGWISV 486
T P SD+ G+G+I+V
Sbjct: 326 -------QTYHPTTKSDLLFGGIGFITV 346
>gi|450121839|ref|ZP_21866478.1| GTP-binding protein YqeH [Streptococcus mutans ST6]
gi|449228725|gb|EMC28079.1| GTP-binding protein YqeH [Streptococcus mutans ST6]
Length = 368
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 120/426 (28%), Positives = 203/426 (47%), Gaps = 65/426 (15%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT+ + GY E K + + C RC L H + IT V
Sbjct: 6 CIGCGAQIQTTAKEQAGYTPKSALE---KGLESGKIYCQRCFRLRHYNEITDV------- 55
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
+S D+ + L + +AL+V ++DI DF+GS + ++ +N ++LV K D+
Sbjct: 56 ----HISDDDFLKLLHEVGDSRALVVNVIDIFDFDGSVIPGLQRFISSNDLLLVGNKADI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W++E ++ L L + LTS+++ I + ++I++ ++GRDVY++G
Sbjct: 112 LPKSVKSGKITQWLMERAHEEGLWPLDLILTSAQNKWAIKELIAKIEELRQGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G+++ S PGTTL I+I G ++DTP
Sbjct: 172 TNVGKSTLINAIIQEITGDKNIITT---------SRFPGTTLDKIEI-PLNDGSYIFDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + + L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLSDKALKYISPKKEIKPKTYQLNPEQ--------------TLFLGGLAR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + T Y +L+++ AD FY K +G LTPP K+ A K
Sbjct: 268 FDYV-TGDKQGFTAYFDNNLKLHRTKLAGADTFYDKHIGSLLTPPDKKEMAAFPK----- 321
Query: 460 RLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVEV 519
++ E T + +D+ SGLGWI + +G +AV P+ V V
Sbjct: 322 ---LVRHEFTIKEKTDLVFSGLGWIRI-----------------NGRAKIAVWAPEGVAV 361
Query: 520 FVRNPM 525
R +
Sbjct: 362 VTRKSL 367
>gi|15924587|ref|NP_372121.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus Mu50]
gi|15927177|ref|NP_374710.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus N315]
gi|148268080|ref|YP_001247023.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus JH9]
gi|150394149|ref|YP_001316824.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus JH1]
gi|156979915|ref|YP_001442174.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus Mu3]
gi|253315366|ref|ZP_04838579.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus str.
CF-Marseille]
gi|255006382|ref|ZP_05144983.2| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus
Mu50-omega]
gi|257793673|ref|ZP_05642652.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus A9781]
gi|258411028|ref|ZP_05681308.1| nitric oxide synthase [Staphylococcus aureus A9763]
gi|258420169|ref|ZP_05683124.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus A9719]
gi|258437428|ref|ZP_05689412.1| nitric-oxide synthase [Staphylococcus aureus A9299]
gi|258443634|ref|ZP_05691973.1| GTP-binding protein YqeH [Staphylococcus aureus A8115]
gi|258446842|ref|ZP_05694996.1| nitric-oxide synthase [Staphylococcus aureus A6300]
gi|258448756|ref|ZP_05696868.1| nitric-oxide synthase [Staphylococcus aureus A6224]
gi|258453573|ref|ZP_05701551.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus A5937]
gi|269203224|ref|YP_003282493.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus ED98]
gi|282893098|ref|ZP_06301332.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus A8117]
gi|282928230|ref|ZP_06335835.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus A10102]
gi|295406720|ref|ZP_06816525.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus A8819]
gi|296276599|ref|ZP_06859106.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus MR1]
gi|297245698|ref|ZP_06929563.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus A8796]
gi|384864817|ref|YP_005750176.1| GTPase [Staphylococcus aureus subsp. aureus ECT-R 2]
gi|387150740|ref|YP_005742304.1| GTP-binding protein YqeH, possibly involved in replication
initiation [Staphylococcus aureus 04-02981]
gi|417650984|ref|ZP_12300747.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21172]
gi|417802923|ref|ZP_12449973.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21318]
gi|417894287|ref|ZP_12538306.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21201]
gi|418424745|ref|ZP_12997859.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus VRS1]
gi|418427739|ref|ZP_13000744.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus VRS2]
gi|418430582|ref|ZP_13003492.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus VRS3a]
gi|418433724|ref|ZP_13006316.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus VRS4]
gi|418437219|ref|ZP_13009015.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus VRS5]
gi|418440119|ref|ZP_13011820.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus VRS6]
gi|418443137|ref|ZP_13014736.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus VRS7]
gi|418446201|ref|ZP_13017674.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus VRS8]
gi|418449215|ref|ZP_13020600.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus VRS9]
gi|418452026|ref|ZP_13023360.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus
VRS10]
gi|418455020|ref|ZP_13026279.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus
VRS11a]
gi|418457898|ref|ZP_13029097.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus
VRS11b]
gi|418567012|ref|ZP_13131377.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21272]
gi|418640343|ref|ZP_13202575.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus IS-3]
gi|418652879|ref|ZP_13214842.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus IS-99]
gi|418660818|ref|ZP_13222430.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus IS-122]
gi|418878514|ref|ZP_13432749.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1165]
gi|418881280|ref|ZP_13435497.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1213]
gi|418884129|ref|ZP_13438322.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1769]
gi|418886861|ref|ZP_13441009.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1150]
gi|418895359|ref|ZP_13449454.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1057]
gi|418914698|ref|ZP_13468669.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIGC340D]
gi|418920677|ref|ZP_13474609.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIGC348]
gi|418931901|ref|ZP_13485736.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1750]
gi|418991524|ref|ZP_13539185.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1096]
gi|419784691|ref|ZP_14310454.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus IS-M]
gi|424768942|ref|ZP_18196179.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CM05]
gi|443637575|ref|ZP_21121650.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21236]
gi|13701395|dbj|BAB42689.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
N315]
gi|14247368|dbj|BAB57759.1| similar to GTPase family protein [Staphylococcus aureus subsp.
aureus Mu50]
gi|147741149|gb|ABQ49447.1| Nitric-oxide synthase [Staphylococcus aureus subsp. aureus JH9]
gi|149946601|gb|ABR52537.1| Nitric-oxide synthase [Staphylococcus aureus subsp. aureus JH1]
gi|156722050|dbj|BAF78467.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
Mu3]
gi|257787645|gb|EEV25985.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus A9781]
gi|257840178|gb|EEV64642.1| nitric oxide synthase [Staphylococcus aureus A9763]
gi|257843880|gb|EEV68274.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus A9719]
gi|257848633|gb|EEV72621.1| nitric-oxide synthase [Staphylococcus aureus A9299]
gi|257851040|gb|EEV74983.1| GTP-binding protein YqeH [Staphylococcus aureus A8115]
gi|257854417|gb|EEV77366.1| nitric-oxide synthase [Staphylococcus aureus A6300]
gi|257858034|gb|EEV80923.1| nitric-oxide synthase [Staphylococcus aureus A6224]
gi|257864304|gb|EEV87054.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus A5937]
gi|262075514|gb|ACY11487.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus ED98]
gi|282590037|gb|EFB95119.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus A10102]
gi|282764416|gb|EFC04542.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus A8117]
gi|285817279|gb|ADC37766.1| GTP-binding protein YqeH, possibly involved in replication
initiation [Staphylococcus aureus 04-02981]
gi|294968467|gb|EFG44491.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus A8819]
gi|297177349|gb|EFH36601.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus A8796]
gi|312829984|emb|CBX34826.1| GTPase of unknown function family protein [Staphylococcus aureus
subsp. aureus ECT-R 2]
gi|329727168|gb|EGG63624.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21172]
gi|334273571|gb|EGL91914.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21318]
gi|341852432|gb|EGS93321.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21201]
gi|371982716|gb|EHO99864.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21272]
gi|375014907|gb|EHS08578.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus IS-3]
gi|375021047|gb|EHS14554.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus IS-99]
gi|375040058|gb|EHS32964.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus IS-122]
gi|377694636|gb|EHT19001.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1165]
gi|377695165|gb|EHT19529.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1057]
gi|377713079|gb|EHT37292.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1750]
gi|377714464|gb|EHT38665.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1769]
gi|377723646|gb|EHT47771.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1096]
gi|377725814|gb|EHT49927.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1150]
gi|377731023|gb|EHT55081.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1213]
gi|377757024|gb|EHT80920.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIGC340D]
gi|377764403|gb|EHT88256.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIGC348]
gi|383363901|gb|EID41227.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus IS-M]
gi|387718027|gb|EIK06022.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus VRS2]
gi|387718094|gb|EIK06088.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus VRS3a]
gi|387719524|gb|EIK07469.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus VRS1]
gi|387724948|gb|EIK12579.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus VRS4]
gi|387727207|gb|EIK14739.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus VRS5]
gi|387730269|gb|EIK17676.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus VRS6]
gi|387735133|gb|EIK22270.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus VRS8]
gi|387736495|gb|EIK23586.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus VRS9]
gi|387736813|gb|EIK23901.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus VRS7]
gi|387744907|gb|EIK31671.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus
VRS10]
gi|387745073|gb|EIK31835.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus
VRS11a]
gi|387746666|gb|EIK33395.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus
VRS11b]
gi|402348333|gb|EJU83325.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CM05]
gi|408423710|emb|CCJ11121.1| Similar to GTPase family protein [Staphylococcus aureus subsp.
aureus ST228]
gi|408425700|emb|CCJ13087.1| Similar to GTPase family protein [Staphylococcus aureus subsp.
aureus ST228]
gi|408427687|emb|CCJ15050.1| Similar to GTPase family protein [Staphylococcus aureus subsp.
aureus ST228]
gi|408429676|emb|CCJ26841.1| Similar to GTPase family protein [Staphylococcus aureus subsp.
aureus ST228]
gi|408431663|emb|CCJ18978.1| Similar to GTPase family protein [Staphylococcus aureus subsp.
aureus ST228]
gi|408433657|emb|CCJ20942.1| Similar to GTPase family protein [Staphylococcus aureus subsp.
aureus ST228]
gi|408435649|emb|CCJ22909.1| Similar to GTPase family protein [Staphylococcus aureus subsp.
aureus ST228]
gi|408437633|emb|CCJ24876.1| Similar to GTPase family protein [Staphylococcus aureus subsp.
aureus ST228]
gi|443405358|gb|ELS63962.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21236]
Length = 366
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 131/432 (30%), Positives = 209/432 (48%), Gaps = 70/432 (16%)
Query: 96 SAVASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKT-VLCGRCRLLSHGHMITAVG 154
S + C GCGAPLQ+ + + PG+V +H+ F+ V+C RC L + + + VG
Sbjct: 2 SDILKCIGCGAPLQSEDKNKPGFV--------PEHNMFRDDVICRRCFRLKNYNEVQDVG 53
Query: 155 GNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILV 214
+ +++ + LS L +K ++V +VD+ DF GSF+ ++ + G IIL
Sbjct: 54 -----------LESEDFLKLLSGLADKKGIVVNVVDVFDFEGSFINAVKRIVGNKKIILA 102
Query: 215 VTKVDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRD 274
K+DLLPK + V +W+ K L V L S++ GI + S I ++ D
Sbjct: 103 ANKLDLLPKQINKRRVKEWLKRTARKYGLEADDVVLISAEKGWGIDDLLSSIANIRENED 162
Query: 275 VYILGSANVGKSAFINALLK-KMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGG 333
VYI+G+ NVGKS IN L++ +GE+D S PGTTL I I
Sbjct: 163 VYIVGTTNVGKSTLINKLIEASVGEKDVVTT---------SRFPGTTLDMIDI-PLDESS 212
Query: 334 KLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIF 393
+YDTPG+ H+ +V ++L + P+ ++ + + + NE + T+F
Sbjct: 213 FMYDTPGIIQDHQMTHLVSEKELKIIMPKKEIKQRVYQL-------NEAQ-------TLF 258
Query: 394 WGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGW 453
+GGL RID + + F+ L ++ T+KA++ ++ +LG LTPP Q
Sbjct: 259 FGGLARIDYVSGGKRPLVCFFS-NDLNIHRTKTEKANDLWRNQLGDLLTPPGNPQ----- 312
Query: 454 KGLDRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHV 513
D L ++ E T + DV ISGLG+I++ P + I V V
Sbjct: 313 -NFDLNELKAVRLE-TGKEKRDVMISGLGFITIGPGAKVI-----------------VRV 353
Query: 514 PKPVEVFVRNPM 525
PK V+V +RN +
Sbjct: 354 PKNVDVVLRNSI 365
>gi|224543253|ref|ZP_03683792.1| hypothetical protein CATMIT_02453 [Catenibacterium mitsuokai DSM
15897]
gi|224523786|gb|EEF92891.1| ribosome biogenesis GTPase YqeH [Catenibacterium mitsuokai DSM
15897]
Length = 362
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 117/425 (27%), Positives = 194/425 (45%), Gaps = 69/425 (16%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
CYGCGA +Q++++ PGYV P++ K+K +LC RC L H H
Sbjct: 6 CYGCGAIIQSADTKKPGYV-PESALSKEK------ILCQRCYKLMHYH-----------Q 47
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
+ ++ D+ L + + L+V +VD+ DFNGS + + G N ++++ K D+
Sbjct: 48 KMESHLTKDDFLRVLQTVGEKDCLVVYIVDLFDFNGSLVPGLMRHIGYNDVLVLANKRDI 107
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + + WV + + L V +TS K + +I + + GRDVY++G
Sbjct: 108 LPKSLKEHRLNTWVRRQFKEYGIKPLDVVVTSGKKNMNFDEIFDKIDEYRHGRDVYVVGI 167
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS FIN +LK + S PGTTL I+I LYDTPG
Sbjct: 168 TNVGKSTFINRMLKNYSDTTNLIT--------TSEFPGTTLDLIKI-PLDDHSSLYDTPG 218
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ H+ ++V +DL + PQ +R SF + S+ +IF+ G RI
Sbjct: 219 ILNEHQYTSIVDEKDLAYIMPQGEVRPMSFQLNSDQ--------------SIFFSGFARI 264
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D K + ++ +++Q++ T+KADE + + + + P K +
Sbjct: 265 DYTKGNKGNFICYFS-RNMQIHRTKTEKADELFNRHKQLQVYGPASSMK--------EMK 315
Query: 461 LLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVEVF 520
E + +R D+ ISGLG++ + + I+ V+VP ++VF
Sbjct: 316 AYEFTLPEEKR---DIVISGLGFVCIHAPKGKIK----------------VYVPDGIDVF 356
Query: 521 VRNPM 525
+R +
Sbjct: 357 MRESL 361
>gi|315282397|ref|ZP_07870817.1| ribosome biogenesis GTPase YqeH [Listeria marthii FSL S4-120]
gi|313613949|gb|EFR87673.1| ribosome biogenesis GTPase YqeH [Listeria marthii FSL S4-120]
Length = 366
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 115/386 (29%), Positives = 182/386 (47%), Gaps = 50/386 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT + D GY K + V+C RC L H + I V
Sbjct: 7 CIGCGAIIQTEDPDKIGYA-------PKSSLNNEQVICKRCFRLKHYNEIQDVA------ 53
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ L+ + ++ALIV +VDI DF+GS+L + AG+NP++LV K D+
Sbjct: 54 -----LTDDDFLRILNQISSKQALIVYVVDIFDFDGSWLPGLPRFAGSNPVLLVGNKEDV 108
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + + W+ ++ L V L S++ G + +I + + G+DVY++G
Sbjct: 109 LPKSLKRDKLTRWMRTRAKEQGLAATDVVLVSAEKGHGFDTLLEKIDELRNGQDVYVVGC 168
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS IN ++K+ + +Q PGTTL I+I G L DTPG
Sbjct: 169 TNVGKSTLINRIIKQASGENNVITTSQ--------FPGTTLDKIEI-PLADGNVLVDTPG 219
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ HH+ A + L A+ P+ ++ F + E T+F G L R+
Sbjct: 220 IINHHQMAHFIDTNTLKAITPKKEIKPAVFQLNEEQ--------------TLFLGALARL 265
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D + L Y +L ++ +KA+ Y+ + G+ L PP EG K L +
Sbjct: 266 DYVSG-GRKSLVVYVSNNLPIHRTKLEKAEALYENQAGLVLQPP----TEEGMKTL--PK 318
Query: 461 LLEIKFEDTERPASDVAISGLGWISV 486
L+ F T + +D+ SGLGW+++
Sbjct: 319 LVPYSF--TVKEKADIVFSGLGWVTI 342
>gi|433444333|ref|ZP_20409252.1| ribosome biogenesis GTPase YqeH [Anoxybacillus flavithermus
TNO-09.006]
gi|432001625|gb|ELK22498.1| ribosome biogenesis GTPase YqeH [Anoxybacillus flavithermus
TNO-09.006]
Length = 367
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 120/391 (30%), Positives = 178/391 (45%), Gaps = 54/391 (13%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG +QT + GY P E ++C RC L H + + V
Sbjct: 7 CIGCGVTIQTEDEKKIGYAPPSALERD-------PIICQRCFRLKHYNEVQDVS------ 53
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ L + + L+VK+VDI DFNGS+L + G ++LV KVDL
Sbjct: 54 -----LTDDDFLNILHGIGQADGLVVKIVDIFDFNGSWLPGLHRFVGKKDVLLVGNKVDL 108
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK V W+ + + L V L S+ G+ V + I + + G+DVY++G
Sbjct: 109 LPKSVKHEKVTRWMKQTARELGLQPRDVFLVSAHKGYGMKEVMTAIDEYRNGKDVYVVGC 168
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS FIN ++K+ A + S PGTTL I+I G LYDTPG
Sbjct: 169 TNVGKSTFINRIIKE--------ATGKGNVITTSYFPGTTLDMIEI-PLDDGSALYDTPG 219
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ HH+ A V +DL + P+ ++ + + + NE + T+F+GGL R+
Sbjct: 220 IINHHQMAHFVDKKDLKVITPKKEIKPKVYQL-------NEQQ-------TLFFGGLARL 265
Query: 401 DLLK--VLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDR 458
D + P C Y L ++ + ADE Y++ LG L PP K E L
Sbjct: 266 DYVSGGRRPFVC---YMSNELFIHRTKREHADELYERHLGELLQPP-RKSYCEQLPPLVA 321
Query: 459 ERLLEIKFEDTERPASDVAISGLGWISV-EP 488
+ P +D+ SGLGW++ EP
Sbjct: 322 HHF------TLKEPKTDIVFSGLGWVTCHEP 346
>gi|373464479|ref|ZP_09556017.1| ribosome biogenesis GTPase YqeH [Lactobacillus kisonensis F0435]
gi|371762400|gb|EHO50931.1| ribosome biogenesis GTPase YqeH [Lactobacillus kisonensis F0435]
Length = 378
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 123/394 (31%), Positives = 190/394 (48%), Gaps = 47/394 (11%)
Query: 94 VNSAVASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAV 153
V+ V C GCGA +QT++ A GY P++ KK + V C RC L H + I V
Sbjct: 8 VDGEVVRCIGCGAKVQTTDKQALGYT-PES--ALKKGIENGEVYCQRCFRLRHYNEIAPV 64
Query: 154 GGNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIIL 213
+S D+ + L+ + +LIV +VDI D NGS + + G NPI+L
Sbjct: 65 S-----------LSDDDFLKLLTSISDTDSLIVYVVDIFDVNGSMIPGLHRFVGNNPILL 113
Query: 214 VVTKVDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGR 273
V K+D+LP V DW+ + + + V L S+K+ + + +I+K ++G+
Sbjct: 114 VGNKLDVLPARLKKTKVKDWLRQQANAAGIRPVDVELISAKTNLDVDRLLDQIEKYRQGK 173
Query: 274 DVYILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGG 333
DVY++G NVGKS IN+++++ + K S PGTTL +ID L G
Sbjct: 174 DVYVVGVTNVGKSTLINSIVRQ--------STGIKELITTSRFPGTTLD--RIDIPLKDG 223
Query: 334 KLY-DTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTI 392
KL DTPG+ + A + ++L + PQ R++ + + + E T+
Sbjct: 224 KLLVDTPGIIQPEQMAHHLVGKELNLVTPQKRIKPKEYQLNPEQ--------------TL 269
Query: 393 FWGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEG 452
F+GG+ R D T Y +L ++ + AD+FY +G LTPP K
Sbjct: 270 FFGGVARFDYNAGEGRRGFTVYAENNLFIHRTKLENADDFYTNHVGSFLTPPSEDDKD-- 327
Query: 453 WKGLDRERLLEIKFEDTERPASDVAISGLGWISV 486
D L KF+ T++ SD+ I GLGWI+V
Sbjct: 328 ----DFPPLEGHKFKITQK--SDLVIEGLGWITV 355
>gi|251781782|ref|YP_002996084.1| GTP-binding protein YqeH [Streptococcus dysgalactiae subsp.
equisimilis GGS_124]
gi|242390411|dbj|BAH80870.1| GTP-binding protein [Streptococcus dysgalactiae subsp. equisimilis
GGS_124]
Length = 372
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 123/426 (28%), Positives = 196/426 (46%), Gaps = 61/426 (14%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG +QT + + G+ KK + + C RC L H + IT V
Sbjct: 6 CIGCGIQIQTEDKEKAGFTPAAAL---KKGMETGELYCQRCFRLRHYNEITDV------- 55
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ DE L + AL+V ++DI DFNGS + + N ++LV K D+
Sbjct: 56 ----HITDDEFLRLLHEVGDSDALVVNVIDIFDFNGSIIPGLSRFISGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK V W+ E ++ L L V LTS+++ I + I + + GRDVY++G
Sbjct: 112 LPKSVKDGKVTQWLTERAHEEGLRPLDVMLTSAQNKYAIKDLIERINELRNGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G++D S PGTTL I+I G ++DTP
Sbjct: 172 TNVGKSTLINAIIQEITGDKDVITT---------SRFPGTTLDKIEI-PLDDGSFIFDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + ++L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLSPKELKIVSPKKEIKPKTYQLNPEQ--------------TLFLGGLSR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + F+ L+++ AD FY K +G LTPP GK++ + L
Sbjct: 268 FDFINGERQGFTAFF-DNQLELHRTKLAGADAFYDKHVGTLLTPP-GKKELTAFPKL--- 322
Query: 460 RLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVEV 519
++ E T D+ SGLGWI V N++ S + +A P+ V V
Sbjct: 323 ----VRHEFTIDQKMDIVFSGLGWIRV------------NVQKDSKAI-VAAWAPEGVAV 365
Query: 520 FVRNPM 525
VR +
Sbjct: 366 IVRKAI 371
>gi|30022413|ref|NP_834044.1| GTP-binding protein YqeH [Bacillus cereus ATCC 14579]
gi|29897971|gb|AAP11245.1| GTP-binding protein [Bacillus cereus ATCC 14579]
Length = 358
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 114/383 (29%), Positives = 173/383 (45%), Gaps = 48/383 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG +QT + GY + E ++ V+C RC L H + I V
Sbjct: 7 CIGCGVEIQTENKNEVGYAPASSLEKEQ-------VICQRCFRLKHYNEIQDVS------ 53
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ L+ + + AL+VK+VDI DFNGS+L + G N ++LV K DL
Sbjct: 54 -----LTDDDFLRILNGIGKSDALVVKIVDIFDFNGSWLPGLHRFVGNNKVLLVGNKADL 108
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
+PK + V W+ + + L V L S+ GI +A I+ + G+DVY++G
Sbjct: 109 IPKSVKHDKVKHWMRYSAKQLGLKPEDVFLISAAKGQGIAELADAIEYYRGGKDVYVVGC 168
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS FIN ++K+ + S PGTTL I I LYDTPG
Sbjct: 169 TNVGKSTFINRMIKEFSDETENVITT-------SHFPGTTLDLIDI-PLDEESSLYDTPG 220
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ HH+ A V + L + P ++ F + E T+F+ GL R
Sbjct: 221 IINHHQMAHYVGKQSLKLITPTKEIKPMVFQLNEEQ--------------TLFFSGLARF 266
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D + T + L ++ +KADE Y+ G L+PP ++ A +
Sbjct: 267 DYVSG-GRRAFTCHFSNRLTIHRTKLEKADELYKNHAGDLLSPPTPEELA------NMPE 319
Query: 461 LLEIKFEDTERPASDVAISGLGW 483
L++ +F + P +DV GLGW
Sbjct: 320 LVKYEF-NIREPKTDVVFFGLGW 341
>gi|19745428|ref|NP_606564.1| GTP-binding protein YqeH [Streptococcus pyogenes MGAS8232]
gi|71902919|ref|YP_279722.1| GTP-binding protein YqeH [Streptococcus pyogenes MGAS6180]
gi|139474400|ref|YP_001129116.1| GTP-binding protein YqeH [Streptococcus pyogenes str. Manfredo]
gi|306827997|ref|ZP_07461264.1| ribosome biogenesis GTPase YqeH [Streptococcus pyogenes ATCC 10782]
gi|386316307|ref|YP_006012471.1| GTP-binding protein YqeH [Streptococcus dysgalactiae subsp.
equisimilis ATCC 12394]
gi|417752128|ref|ZP_12400359.1| ribosome biogenesis GTPase YqeH [Streptococcus dysgalactiae subsp.
equisimilis SK1249]
gi|19747540|gb|AAL97063.1| conserved hypothetical protein [Streptococcus pyogenes MGAS8232]
gi|71802014|gb|AAX71367.1| GTP-binding protein [Streptococcus pyogenes MGAS6180]
gi|134272647|emb|CAM30914.1| GTP-binding protein [Streptococcus pyogenes str. Manfredo]
gi|304429916|gb|EFM32958.1| ribosome biogenesis GTPase YqeH [Streptococcus pyogenes ATCC 10782]
gi|323126594|gb|ADX23891.1| GTP-binding protein YqeH [Streptococcus dysgalactiae subsp.
equisimilis ATCC 12394]
gi|333772086|gb|EGL48968.1| ribosome biogenesis GTPase YqeH [Streptococcus dysgalactiae subsp.
equisimilis SK1249]
Length = 372
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 116/393 (29%), Positives = 184/393 (46%), Gaps = 48/393 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG +QT + + G+ KK + + C RC L H + IT V
Sbjct: 6 CIGCGIQIQTEDKEKAGFTPAAAL---KKGMETGELYCQRCFRLRHYNEITDV------- 55
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ DE L + AL+V ++DI DFNGS + + N ++LV K D+
Sbjct: 56 ----HITDDEFLRLLHEVGDSDALVVNVIDIFDFNGSIIPGLSRFISGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK V W+ E ++ L L V LTS+++ I + I + + GRDVY++G
Sbjct: 112 LPKSVKDGKVTQWLTERAHEEGLRPLDVMLTSAQNKYAIKDLIERINELRNGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G++D S PGTTL I+I G ++DTP
Sbjct: 172 TNVGKSTLINAIIQEITGDKDVITT---------SRFPGTTLDKIEI-PLDDGSFIFDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + ++L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLSPKELKIVSPKKEIKPKTYQLNPEQ--------------TLFLGGLSR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + F+ L+++ AD FY K +G LTPP GK++ + L
Sbjct: 268 FDFINGERQGFTAFF-DNQLELHRTKLAGADAFYDKHVGTLLTPP-GKKELTAFPKL--- 322
Query: 460 RLLEIKFEDTERPASDVAISGLGWISVEPVRRS 492
++ E T D+ SGLGWI V + S
Sbjct: 323 ----VRHEFTIDQKMDIVFSGLGWIRVNGQKDS 351
>gi|450010364|ref|ZP_21828633.1| GTP-binding protein YqeH [Streptococcus mutans A19]
gi|450023323|ref|ZP_21830536.1| GTP-binding protein YqeH [Streptococcus mutans U138]
gi|450116249|ref|ZP_21864385.1| GTP-binding protein YqeH [Streptococcus mutans ST1]
gi|449190218|gb|EMB91807.1| GTP-binding protein YqeH [Streptococcus mutans A19]
gi|449193636|gb|EMB95015.1| GTP-binding protein YqeH [Streptococcus mutans U138]
gi|449227139|gb|EMC26583.1| GTP-binding protein YqeH [Streptococcus mutans ST1]
Length = 368
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 112/387 (28%), Positives = 193/387 (49%), Gaps = 48/387 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT+ + GY E K + + C RC L H + IT V
Sbjct: 6 CIGCGAQIQTTAKEQAGYTPKSALE---KGLESGKIYCQRCFRLRHYNEITDV------- 55
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
+S D+ + L + +AL+V ++DI DFNGS + ++ ++ ++LV K D+
Sbjct: 56 ----HISDDDFLKLLHEVGDSRALVVNVIDIFDFNGSVIPGLQRFISSSDLLLVGNKADI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W++E ++ L L + LTS+++ I + ++I++ ++GRDVY++G
Sbjct: 112 LPKSVKSGKITQWLMERAHEEGLRPLDLILTSAQNKWAIKELIAKIEELRQGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G+++ S PGTTL I+I G ++DTP
Sbjct: 172 TNVGKSTLINAIIQEITGDKNIITT---------SRFPGTTLDKIEI-PLNDGSYIFDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + + L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLSDKALKYISPKKEIKPKTYQLNPEQ--------------TLFLGGLAR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + T Y +L+++ AD FY K +G LTPP K++ + L
Sbjct: 268 FDYV-TGDKQGFTAYFDNNLKLHRTKLAGADAFYDKHIGSLLTPP-DKKEMTAFPKL--- 322
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
++ E T + +D+ SGLGWI +
Sbjct: 323 ----VRHEFTIKEKTDLVFSGLGWIRI 345
>gi|450072630|ref|ZP_21848694.1| GTP-binding protein YqeH [Streptococcus mutans M2A]
gi|449210944|gb|EMC11369.1| GTP-binding protein YqeH [Streptococcus mutans M2A]
Length = 368
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 112/387 (28%), Positives = 191/387 (49%), Gaps = 48/387 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT+ + GY E K + + C RC L H + IT V
Sbjct: 6 CIGCGAQIQTTAKEQAGYTPKSALE---KGLESGKIYCQRCFRLRHYNEITDV------- 55
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
+S D+ + L + +A +V ++DI DFNGS + ++ ++ ++LV K D+
Sbjct: 56 ----HISDDDFLKLLHEVGDSRAFVVNVIDIFDFNGSVIPGLQRFISSSDLLLVGNKTDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W++E ++ L L + LTS+++ I + ++I++ ++GRDVY++G
Sbjct: 112 LPKSVKSGKITQWLMERAHEEGLRPLDLILTSAQNKWAIKELIAKIEELRQGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G+++ S PGTTL I+I G ++DTP
Sbjct: 172 TNVGKSTLINAIIQEITGDKNIITT---------SRFPGTTLDKIEI-PLNDGSYIFDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + + L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLSDKALKYISPKKEIKPKTYQLNPEQ--------------TLFLGGLAR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + T Y +L+++ AD FY K +G LTPP K+ A K
Sbjct: 268 FDYV-TGDKQGFTAYFDNNLKLHRTKLAGADAFYDKHIGSLLTPPDKKEMAAFPK----- 321
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
++ E T + +D+ SGLGWI +
Sbjct: 322 ---LVRHEFTIKEKTDLVFSGLGWIRI 345
>gi|339448445|ref|ZP_08652001.1| GTPase YqeH [Lactobacillus fructivorans KCTC 3543]
Length = 372
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 132/425 (31%), Positives = 198/425 (46%), Gaps = 65/425 (15%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +Q ++ DA GY T +KK K + C RC L H + I
Sbjct: 12 CIGCGAEIQDTDPDAVGYTP--TSAIKKGIDSGK-LYCQRCFKLRHYNQIEP-------- 60
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
VS DE + LS + +L+V +VD+ D +GS + I+ G NPIILV K DL
Sbjct: 61 ---SRVSNDEFLKLLSKISETNSLVVYVVDVFDVDGSMIPGIQRFVGKNPIILVGNKSDL 117
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LP + N V DW+ + K + + + L S+K+ + + I +KGR+VY++G
Sbjct: 118 LPSSFNHNKVKDWLRQMANKNGIRPIDIELVSAKTNQSVDDLLKAISNHQKGRNVYVVGV 177
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS IN ++++ + +K S PGTTL I+I G +L DTPG
Sbjct: 178 TNVGKSTLINQIIQQ--------STGEKQVITTSKFPGTTLDLIKI-PLEDGRELIDTPG 228
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
V + A + ++DL ++PQ R++ +++ + G T+F G + R
Sbjct: 229 VIHEGQMAHYLGSKDLKYVSPQKRIKPKTYQLDP--------------GQTLFLGAIGRF 274
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D + T Y +L ++ + ADEF+ K G LTPP GK
Sbjct: 275 DFISG-ERHGFTVYADNNLMIHRTKLENADEFFDKHAGELLTPPTGKDNV--------IE 325
Query: 461 LLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVEVF 520
L +F+ T+R SD+ I GLGWI+V P ++ A + PK V V
Sbjct: 326 LQRYEFKVTDR--SDLVIEGLGWITV-PKGSTV----------------AGYAPKGVSVL 366
Query: 521 VRNPM 525
+R M
Sbjct: 367 IRKAM 371
>gi|418318528|ref|ZP_12929930.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21232]
gi|365242991|gb|EHM83686.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21232]
Length = 366
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 130/432 (30%), Positives = 209/432 (48%), Gaps = 70/432 (16%)
Query: 96 SAVASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKT-VLCGRCRLLSHGHMITAVG 154
S + C GCGAPLQ+ + + PG+V +H+ F+ V+C RC L + + + VG
Sbjct: 2 SDILKCIGCGAPLQSEDKNKPGFV--------PEHNMFRDDVICRRCFRLKNYNEVQDVG 53
Query: 155 GNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILV 214
+ +++ + LS L +K ++V +VD+ DF GSF+ ++ + G IIL
Sbjct: 54 -----------LESEDFLKLLSGLADKKGIVVNVVDVFDFEGSFINAVKRIVGNKKIILA 102
Query: 215 VTKVDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRD 274
K+DLLPK + V +W+ K L V L S++ GI + S I ++ D
Sbjct: 103 ANKLDLLPKQINKRRVKEWLKRTARKYGLEADDVVLISAEKGWGIDDLLSSIANIRENED 162
Query: 275 VYILGSANVGKSAFINALLK-KMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGG 333
VYI+G+ NVGKS IN L++ +GE+D S PGTTL I I
Sbjct: 163 VYIVGTTNVGKSTLINKLIEASVGEKDVVTT---------SRFPGTTLDMIDI-PLDETS 212
Query: 334 KLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIF 393
+YDTPG+ H+ +V ++L + P+ ++ + + + NE + T+F
Sbjct: 213 FMYDTPGIIQDHQMTHLVSEKELKIIMPKKEIKQRVYQL-------NEAQ-------TLF 258
Query: 394 WGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGW 453
+GGL RID + + F+ L ++ T+KA++ ++ +LG LTPP Q
Sbjct: 259 FGGLARIDYVSGGKRPLVCFFS-NDLNIHRTKTEKANDLWRNQLGDLLTPPGNSQ----- 312
Query: 454 KGLDRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHV 513
D + ++ E T + DV ISGLG+I++ P + I V V
Sbjct: 313 -NFDLNEVKAVRLE-TGKEKRDVMISGLGFITIGPGAKVI-----------------VRV 353
Query: 514 PKPVEVFVRNPM 525
PK V+V +RN +
Sbjct: 354 PKNVDVVLRNSI 365
>gi|450092066|ref|ZP_21855759.1| GTP-binding protein YqeH [Streptococcus mutans W6]
gi|450150197|ref|ZP_21876491.1| GTP-binding protein YqeH [Streptococcus mutans 14D]
gi|449218759|gb|EMC18758.1| GTP-binding protein YqeH [Streptococcus mutans W6]
gi|449233832|gb|EMC32879.1| GTP-binding protein YqeH [Streptococcus mutans 14D]
Length = 368
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 112/387 (28%), Positives = 192/387 (49%), Gaps = 48/387 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT+ + GY E K + + C RC L H + IT V
Sbjct: 6 CIGCGAQIQTTAKEQAGYTPKSALE---KGLESGKIYCQRCFRLRHYNEITDV------- 55
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
+S D+ + L + +AL+V ++DI DFNGS + ++ ++ ++LV K D+
Sbjct: 56 ----HISDDDFLKLLHEVGDSRALVVNVIDIFDFNGSVIPGLQRFISSSDLLLVGNKADI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W++E ++ + L + LTS+++ I + ++I++ ++GRDVY++G
Sbjct: 112 LPKSVKSGKITQWLMERAHEEGVRPLDLILTSAQNKWAIKELIAKIEELRQGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G+++ S PGTTL I+I G ++DTP
Sbjct: 172 TNVGKSTLINAIIQEITGDKNIITT---------SRFPGTTLDKIEI-PLNDGSYIFDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + + L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLSDKALKYISPKKEIKPKTYQLNPEQ--------------TLFLGGLAR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + T Y +L+++ AD FY K +G LTPP K+ A K
Sbjct: 268 FDYV-TGDKQGFTAYFDNNLKLHRTKLAGADTFYDKHIGSLLTPPDKKEMAAFPK----- 321
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
++ E T + +D+ SGLGWI +
Sbjct: 322 ---LVRHEFTIKEKTDLVFSGLGWIRI 345
>gi|90961476|ref|YP_535392.1| GTP-binding protein YqeH [Lactobacillus salivarius UCC118]
gi|301300328|ref|ZP_07206533.1| ribosome biogenesis GTPase YqeH [Lactobacillus salivarius
ACS-116-V-Col5a]
gi|385840205|ref|YP_005863529.1| GTP-binding protein [Lactobacillus salivarius CECT 5713]
gi|90820670|gb|ABD99309.1| GTP-binding protein [Lactobacillus salivarius UCC118]
gi|300214326|gb|ADJ78742.1| GTP-binding protein [Lactobacillus salivarius CECT 5713]
gi|300852064|gb|EFK79743.1| ribosome biogenesis GTPase YqeH [Lactobacillus salivarius
ACS-116-V-Col5a]
Length = 373
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 121/396 (30%), Positives = 190/396 (47%), Gaps = 46/396 (11%)
Query: 93 KVNSAVASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITA 152
+ ++ + C GCGA +Q+ + GY P++ KK + + + C RC L H + I
Sbjct: 3 ETSNEILYCIGCGAKIQSENPNELGYT-PES--AVKKGLETEELYCQRCFRLRHYNEIAD 59
Query: 153 VGGNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPII 212
V ++ D+ L+ + +LIV +VDI DFNGS + + G N ++
Sbjct: 60 VS-----------LTDDDFLRLLNQIGESDSLIVNVVDIFDFNGSVIPGLHRFVGKNDVL 108
Query: 213 LVVTKVDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKG 272
LV K DLLPK + + DW+ + K+ L + V LTS+ I + I K +KG
Sbjct: 109 LVGNKSDLLPKSLKRSRIKDWLRQEANKQGLRPIDVALTSASKGYEIDNLLELIDKYRKG 168
Query: 273 RDVYILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGG 332
RDVY++G NVGKS IN ++K+ +++ S PGTTL I+I F G
Sbjct: 169 RDVYVVGVTNVGKSTLINRIIKQQ------TGISELI--TTSRFPGTTLDKIEI-PFDDG 219
Query: 333 GKLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTI 392
L DTPG+ + A + + L +PQ ++ + + + NE G TI
Sbjct: 220 KNLIDTPGIIHKQQMAHYLTGKSLKFASPQKEIKPKVYQL-------NE-------GQTI 265
Query: 393 FWGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEG 452
F G L R D + T + Y +L ++ AD+FY+K G L PP ++ +
Sbjct: 266 FLGSLARFDYISG-GRTSVIAYFDNNLPLHRTKLQNADKFYEKHAGELLQPPTREELKK- 323
Query: 453 WKGLDRERLLEIKFEDTERPASDVAISGLGWISVEP 488
+L +F+ +E+ SD+ SGLGWIS+ P
Sbjct: 324 -----MPKLTRFEFKVSEK--SDLVFSGLGWISLSP 352
>gi|253732250|ref|ZP_04866415.1| GTP-binding protein [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|253733152|ref|ZP_04867317.1| GTP-binding protein [Staphylococcus aureus subsp. aureus TCH130]
gi|417897885|ref|ZP_12541811.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21259]
gi|253724039|gb|EES92768.1| GTP-binding protein [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|253728908|gb|EES97637.1| GTP-binding protein [Staphylococcus aureus subsp. aureus TCH130]
gi|341849387|gb|EGS90530.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21259]
Length = 366
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 130/432 (30%), Positives = 209/432 (48%), Gaps = 70/432 (16%)
Query: 96 SAVASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKT-VLCGRCRLLSHGHMITAVG 154
S + C GCGAPLQ+ + + PG+V +H+ F+ V+C RC L + + + VG
Sbjct: 2 SDILKCIGCGAPLQSEDKNKPGFV--------PEHNMFRDDVICRRCFRLKNYNEVQDVG 53
Query: 155 GNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILV 214
+ +++ + LS L +K ++V +VD+ DF GSF+ ++ + G IIL
Sbjct: 54 -----------LESEDFLKLLSGLADKKGIVVNVVDVFDFEGSFINAVKRIVGNKKIILA 102
Query: 215 VTKVDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRD 274
K+DLLPK + V +W+ K L V L S++ GI + S I ++ D
Sbjct: 103 ANKLDLLPKQINKRRVKEWLKRTARKYGLEADDVVLISAEKGWGIDDLLSSIANIRENED 162
Query: 275 VYILGSANVGKSAFINALLK-KMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGG 333
VYI+G+ NVGKS IN L++ +GE+D S PGTTL I I
Sbjct: 163 VYIVGTTNVGKSTLINKLIEASVGEKDVVTT---------SRFPGTTLDMIDI-PLDESS 212
Query: 334 KLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIF 393
+YDTPG+ H+ +V ++L + P+ ++ + + + NE + T+F
Sbjct: 213 FMYDTPGIIQDHQMTHLVSEKELKIIMPKKEIKQRVYQL-------NEAQ-------TLF 258
Query: 394 WGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGW 453
+GGL RID + + F+ L ++ T+KA++ ++ +LG LTPP Q
Sbjct: 259 FGGLARIDYVSGGKRPLVCFFS-NDLNIHRTKTEKANDLWRNQLGDLLTPPGNPQ----- 312
Query: 454 KGLDRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHV 513
D + ++ E T + DV ISGLG+I++ P + I V V
Sbjct: 313 -NFDLNEVKAVRLE-TGKEKRDVMISGLGFITIGPGAKVI-----------------VRV 353
Query: 514 PKPVEVFVRNPM 525
PK V+V +RN +
Sbjct: 354 PKNVDVVLRNSI 365
>gi|406837396|ref|ZP_11096990.1| GTPase YqeH [Lactobacillus vini DSM 20605]
Length = 371
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 119/386 (30%), Positives = 184/386 (47%), Gaps = 45/386 (11%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGAP+QT GY+ P + + + Q + C RC L H + I V
Sbjct: 8 CVGCGAPIQTKRPQELGYI-PAAALVTRGNQQLD-IYCQRCFRLRHYNEIEPVS------ 59
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ + LS + ++ AL+V ++DI D +GS L + G NP ILV K DL
Sbjct: 60 -----LTNDDFLKVLSRISQQSALVVNVIDIFDVDGSLLPALHRFIGDNPYILVGNKEDL 114
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + DW+ + L L+V L S++ GI + +I K ++ RDVY +G
Sbjct: 115 LPKSLKRAKIKDWLRQQANHFGLKPLAVVLLSAEKNRGIDELLEQINKYRQTRDVYFVGV 174
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS IN LL++ A K S PGTTL I++ GG L DTPG
Sbjct: 175 TNVGKSTLINHLLQQ--------AAGIKNLITVSRFPGTTLDFIKL-PLTDGGNLIDTPG 225
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ ++ + +++ + P L+ + + + + G T+ GGL RI
Sbjct: 226 IIQSNQIIHRLTTKEMKLIQPIKELKPKVYQLGA--------------GQTLLLGGLARI 271
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D LK + + Y L+V+ T+ A+ F + LG L PP K+ A ++ L R
Sbjct: 272 DYLKC-SKKSMILYLAGQLKVHRTKTENAEHFIDRHLGGLLQPPF-KENAASFRNLQRH- 328
Query: 461 LLEIKFEDTERPASDVAISGLGWISV 486
F+ ++ SD+ SGLGW+++
Sbjct: 329 ----VFKTQQK--SDLVFSGLGWVTI 348
>gi|254827779|ref|ZP_05232466.1| GTP-binding protein YqeH [Listeria monocytogenes FSL N3-165]
gi|258600159|gb|EEW13484.1| GTP-binding protein YqeH [Listeria monocytogenes FSL N3-165]
Length = 366
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 115/386 (29%), Positives = 183/386 (47%), Gaps = 50/386 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT + D GY K + V+C RC L H + I V
Sbjct: 7 CIGCGAVIQTEDPDKIGYA-------PKSSLNNEQVICKRCFRLKHYNEIQDVA------ 53
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ L+ + ++ALIV +VDI DF+GS+L + AG+NP++LV K D+
Sbjct: 54 -----LTDDDFLRILNQISSKQALIVYVVDIFDFDGSWLPGLPRFAGSNPVLLVGNKEDV 108
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + + W+ ++ L V L S++ G + +I++ + G+DVY++G
Sbjct: 109 LPKSLKRDKLTRWMRTRAKEQGLAATDVVLVSAEKGHGFDTLLEKIEELRNGQDVYVVGC 168
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS IN ++K+ + +Q PGTTL I+I G L DTPG
Sbjct: 169 TNVGKSTLINRIIKQASGENNVITTSQ--------FPGTTLDKIEI-PLADGNVLVDTPG 219
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ HH+ A + L A+ P+ ++ F + E T+F G L R+
Sbjct: 220 IINHHQMAHFIDTTTLKAITPKKEVKPAVFQLNEEQ--------------TLFLGALARL 265
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D + L Y +L ++ +KA+ Y+K+ G+ L PP E K L +
Sbjct: 266 DYVSG-GRKSLVVYVSNNLPIHRTKLEKAEALYEKQAGLVLQPP----TEEDMKTL--PK 318
Query: 461 LLEIKFEDTERPASDVAISGLGWISV 486
L+ F T + +D+ SGLGW+++
Sbjct: 319 LVPYSF--TVKEKADIVFSGLGWVTI 342
>gi|227513534|ref|ZP_03943583.1| GTP-binding protein [Lactobacillus buchneri ATCC 11577]
gi|227083407|gb|EEI18719.1| GTP-binding protein [Lactobacillus buchneri ATCC 11577]
Length = 378
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 118/393 (30%), Positives = 185/393 (47%), Gaps = 45/393 (11%)
Query: 94 VNSAVASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAV 153
V+ V C GCGA +QT+ DA GY E K Q V C RC L H + I V
Sbjct: 8 VDGEVVHCIGCGAKVQTTNKDALGYTPKSALE---KGLQNGEVYCQRCFRLRHYNEIAPV 64
Query: 154 GGNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIIL 213
+S D+ + L+ + +LIV +VDI D NGS + + G NP++L
Sbjct: 65 S-----------LSDDDFLKLLTSISGTDSLIVYVVDIFDVNGSLIPGLHRFVGDNPVLL 113
Query: 214 VVTKVDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGR 273
V K+D+LP V DW+ + + + V L S+K+ + + +I+K + G+
Sbjct: 114 VGNKLDVLPASIKERKVRDWLRQRANSAGIRPIDVELISAKTNFDVDHLLDQIEKYRDGK 173
Query: 274 DVYILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGG 333
DVY++G NVGKS INA++++ + K S PGTTL I I G
Sbjct: 174 DVYVVGVTNVGKSTLINAVIRQ--------STGIKELITTSRFPGTTLDRIDI-PLNDGH 224
Query: 334 KLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIF 393
+ DTPG+ + A + ++L + PQ ++ + + + E T+F
Sbjct: 225 SIVDTPGIIQPEQMAHHLVGKELNLVTPQKTIKPKIYQLNPEQ--------------TLF 270
Query: 394 WGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGW 453
+GG+ R D + T Y +L ++ + A+ FY+K LG L+PP +K
Sbjct: 271 FGGVARFDYDSGDGKHGFTVYAENNLYIHRTKLENAEAFYEKHLGDLLSPPSENRKD--- 327
Query: 454 KGLDRERLLEIKFEDTERPASDVAISGLGWISV 486
D L +F+ +++ SDV I GLGW++V
Sbjct: 328 ---DFPPLEHHEFKTSQK--SDVVIEGLGWVTV 355
>gi|304380806|ref|ZP_07363473.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus ATCC BAA-39]
gi|304340682|gb|EFM06615.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus ATCC BAA-39]
Length = 366
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 130/432 (30%), Positives = 209/432 (48%), Gaps = 70/432 (16%)
Query: 96 SAVASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKT-VLCGRCRLLSHGHMITAVG 154
S + C GCGAPLQ+ + + PG+V +H+ F+ V+C RC L + + + VG
Sbjct: 2 SDILKCIGCGAPLQSEDKNKPGFV--------PEHNMFRDDVICRRCFRLKNYNEVQDVG 53
Query: 155 GNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILV 214
+ +++ + LS L +K ++V +VD+ DF GSF+ ++ + G IIL
Sbjct: 54 -----------LESEDFLKLLSGLADKKGIVVNVVDVFDFEGSFINAVKRIVGNKKIILA 102
Query: 215 VTKVDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRD 274
K+DLLPK + V +W+ K L V L S++ GI + S I ++ D
Sbjct: 103 ANKLDLLPKQINKRRVKEWLKRTARKYGLEADDVVLISAEKGWGIDDLLSSIANIRENED 162
Query: 275 VYILGSANVGKSAFINALLK-KMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGG 333
VYI+G+ NVGKS IN L++ +GE+D S PGTTL I I
Sbjct: 163 VYIVGTTNVGKSTLINKLIEASVGEKDVVTT---------SRFPGTTLDMIDI-PLDETS 212
Query: 334 KLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIF 393
+YDTPG+ H+ +V ++L + P+ ++ + + + NE + T+F
Sbjct: 213 FMYDTPGIIQDHQMTHLVSEKELKIIMPKKEIKQRVYQL-------NEAQ-------TLF 258
Query: 394 WGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGW 453
+GGL RID + + F+ L ++ T+KA++ ++ +LG LTPP Q
Sbjct: 259 FGGLARIDYVSDGKRPLVCFFS-NDLNIHRTKTEKANDLWRNQLGDLLTPPGNPQ----- 312
Query: 454 KGLDRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHV 513
D + ++ E T + DV ISGLG+I++ P + I V V
Sbjct: 313 -NFDLNEVKAVRLE-TGKEKRDVMISGLGFITIGPGAKVI-----------------VRV 353
Query: 514 PKPVEVFVRNPM 525
PK V+V +RN +
Sbjct: 354 PKNVDVVLRNSI 365
>gi|284801878|ref|YP_003413743.1| GTP-binding protein YqeH [Listeria monocytogenes 08-5578]
gi|284995020|ref|YP_003416788.1| GTP-binding protein YqeH [Listeria monocytogenes 08-5923]
gi|284057440|gb|ADB68381.1| GTP-binding protein YqeH [Listeria monocytogenes 08-5578]
gi|284060487|gb|ADB71426.1| GTP-binding protein YqeH [Listeria monocytogenes 08-5923]
Length = 366
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 115/386 (29%), Positives = 182/386 (47%), Gaps = 50/386 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT + D GY K + V+C RC L H + I V
Sbjct: 7 CIGCGAVIQTEDPDKIGYA-------PKSSLNNEQVICKRCFRLKHYNEIQDVA------ 53
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ L+ + ++ALIV +VDI DF+GS+L + AG+NP++LV K D+
Sbjct: 54 -----LTDDDFLRILNQISSKQALIVYVVDIFDFDGSWLPGLHRFAGSNPVLLVGNKEDV 108
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + + W+ ++ L V L S++ G + +I + + G+DVY++G
Sbjct: 109 LPKSLKRDKLTRWMRTRAKEQGLAATDVVLVSAEKGHGFDTLLEKIDELRNGQDVYVVGC 168
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS IN ++K+ + +Q PGTTL I+I G L DTPG
Sbjct: 169 TNVGKSTLINRIIKQASGENNVITTSQ--------FPGTTLDKIEI-PLADGNVLVDTPG 219
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ HH+ A + L A+ P+ ++ F + E T+F G L R+
Sbjct: 220 IINHHQMAHFIDTTTLKAITPKKEVKPAVFQLNEEQ--------------TLFLGALARL 265
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D + L Y +L ++ +KA+ Y+K+ G+ L PP E K L +
Sbjct: 266 DYVSG-GRKSLVVYVSNNLPIHRTKLEKAEALYEKQAGLVLQPP----TEEDMKTL--PK 318
Query: 461 LLEIKFEDTERPASDVAISGLGWISV 486
L+ F T + +D+ SGLGW+++
Sbjct: 319 LVPYSF--TVKEKADIVFSGLGWVTI 342
>gi|332638513|ref|ZP_08417376.1| GTPase YqeH [Weissella cibaria KACC 11862]
Length = 380
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 122/390 (31%), Positives = 187/390 (47%), Gaps = 53/390 (13%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT GY P + LK ++ VLC RC L H + I V
Sbjct: 17 CIGCGALIQTERKGELGYA-PMSALLKGFENE--EVLCQRCFRLRHYNEIQPVD------ 67
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ R L+ + +L+V ++D+ DF+GS + + G NP++LV KVD+
Sbjct: 68 -----LTDDDFRLLLNEISTTDSLVVYVMDVFDFSGSLIPGLHRFVGKNPVLLVGNKVDV 122
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + + DW+ + L + V LTS KS + + I+K ++GR VY++G
Sbjct: 123 LPKSLKRSKIKDWMRQQANVAGLRPIDVMLTSGKSGDDVPELLDMIEKYREGRSVYVVGV 182
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQI----DAFLGGGKLY 336
NVGKS IN ++K A K S PGTTL I+I D F +
Sbjct: 183 TNVGKSTLINQIIKD-------ATGDSKDVITTSRFPGTTLDRIEIPLDDDTF-----II 230
Query: 337 DTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGG 396
DTPG+ + A + +DL ++PQ L+ +++ + E T+F G
Sbjct: 231 DTPGIIHQDQMAHYLTPKDLKYVSPQKELKPKTYQLNPEQ--------------TLFMGA 276
Query: 397 LVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGL 456
L R D ++ + +T Y +L ++ +KADEFY K G L PP + + L
Sbjct: 277 LARFDFIQG-EKAGITAYFENNLMIHRTKLEKADEFYSKHAGELLMPPT-TENLDMLPPL 334
Query: 457 DRERLLEIKFEDTERPASDVAISGLGWISV 486
R +F+ TE+ +D+ I GLGWI+V
Sbjct: 335 QRH-----EFKVTEK--TDIVIDGLGWITV 357
>gi|418321301|ref|ZP_12932647.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus VCU006]
gi|418875536|ref|ZP_13429792.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIGC93]
gi|421148523|ref|ZP_15608183.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus str.
Newbould 305]
gi|443639852|ref|ZP_21123852.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21196]
gi|365225533|gb|EHM66776.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus VCU006]
gi|377769608|gb|EHT93376.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIGC93]
gi|394331666|gb|EJE57749.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus str.
Newbould 305]
gi|443406127|gb|ELS64711.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21196]
Length = 366
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 130/432 (30%), Positives = 208/432 (48%), Gaps = 70/432 (16%)
Query: 96 SAVASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKT-VLCGRCRLLSHGHMITAVG 154
S + C GCGAPLQ+ + + PG+V +H+ F+ V+C RC L + + + VG
Sbjct: 2 SDILKCIGCGAPLQSEDKNKPGFV--------PEHNMFRDDVICRRCFRLKNYNEVQDVG 53
Query: 155 GNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILV 214
+ +++ + LS L +K ++V +VD+ DF GSF+ ++ + G IIL
Sbjct: 54 -----------LESEDFLKLLSGLADKKGIVVNVVDVFDFEGSFINAVKRIVGNKKIILA 102
Query: 215 VTKVDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRD 274
K+DLLPK + V +W+ K L V L S++ GI + S I + D
Sbjct: 103 ANKLDLLPKQINKRRVKEWLKRTARKYGLEADDVVLISAEKGWGIDDLLSSIANIRDNED 162
Query: 275 VYILGSANVGKSAFINALLK-KMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGG 333
VYI+G+ NVGKS IN L++ +GE+D S PGTTL I I
Sbjct: 163 VYIVGTTNVGKSTLINKLIEASVGEKDVVTT---------SRFPGTTLDMIDI-PLDESS 212
Query: 334 KLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIF 393
+YDTPG+ H+ +V ++L + P+ ++ + + + NE + T+F
Sbjct: 213 FMYDTPGIIQDHQMTHLVSEKELKIIMPKKEIKQRVYQL-------NEAQ-------TLF 258
Query: 394 WGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGW 453
+GGL RID + + F+ L ++ T+KA++ ++ +LG LTPP Q
Sbjct: 259 FGGLARIDYVSGGKRPLVCFFS-NDLNIHRTKTEKANDLWRNQLGDLLTPPGNPQ----- 312
Query: 454 KGLDRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHV 513
D + ++ E T + DV ISGLG+I++ P + I V V
Sbjct: 313 -NFDLNEIKAVRLE-TGKEKRDVMISGLGFITIGPGAKVI-----------------VRV 353
Query: 514 PKPVEVFVRNPM 525
PK V+V +RN +
Sbjct: 354 PKNVDVVLRNSI 365
>gi|418906541|ref|ZP_13460567.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIGC345D]
gi|377763446|gb|EHT87302.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIGC345D]
Length = 366
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 130/432 (30%), Positives = 209/432 (48%), Gaps = 70/432 (16%)
Query: 96 SAVASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKT-VLCGRCRLLSHGHMITAVG 154
S + C GCGAPLQ+ + + PG+V +H+ F+ V+C RC L + + + VG
Sbjct: 2 SDILKCIGCGAPLQSEDKNKPGFV--------PEHNMFRDDVICRRCFRLKNYNEVQDVG 53
Query: 155 GNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILV 214
+ +++ + LS L +K ++V +VD+ DF GSF+ ++ + G IIL
Sbjct: 54 -----------LESEDFLKLLSGLADKKGIVVNVVDVFDFEGSFINAVKRIVGNKKIILA 102
Query: 215 VTKVDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRD 274
K+DLLPK + V +W+ K L V L S++ GI + S I ++ D
Sbjct: 103 ANKLDLLPKQINKRRVKEWLKRTARKYGLEADDVVLISAEKGWGIDDLLSSIANIRENED 162
Query: 275 VYILGSANVGKSAFINALLK-KMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGG 333
VYI+G+ NVGKS IN L++ +GE+D S PGTTL I I
Sbjct: 163 VYIVGTTNVGKSTLINKLIEASVGEKDVVTT---------SRFPGTTLDMIDI-PLDETS 212
Query: 334 KLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIF 393
+YDTPG+ H+ +V ++L + P+ ++ + + + NE + T+F
Sbjct: 213 FMYDTPGIIQDHQMTHLVSGKELKIIMPKKEIKQRVYQL-------NEAQ-------TLF 258
Query: 394 WGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGW 453
+GGL RID + + F+ L ++ T+KA++ ++ +LG LTPP Q
Sbjct: 259 FGGLARIDYVSGGKRPLVCFFS-NDLNIHRTKTEKANDLWRNQLGDLLTPPGNPQ----- 312
Query: 454 KGLDRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHV 513
D + ++ E T + DV ISGLG+I++ P + I V V
Sbjct: 313 -NFDLNEVKAVRLE-TGKEKRDVMISGLGFITIGPGAKVI-----------------VRV 353
Query: 514 PKPVEVFVRNPM 525
PK V+V +RN +
Sbjct: 354 PKNVDVVLRNSI 365
>gi|307286839|ref|ZP_07566921.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0109]
gi|306502054|gb|EFM71340.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0109]
Length = 369
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 127/390 (32%), Positives = 186/390 (47%), Gaps = 49/390 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C G GA +QT GY +E K + V C RC L H + I V
Sbjct: 7 CIGWGAIIQTENPHELGYTPKTAFE---KGMETGEVYCQRCFRLRHYNDIQDV------- 56
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
Q D LR L+ L E ALIV +VDI DFNGS + + G NP++LV KVD+
Sbjct: 57 ---QLTDDDFLR-LLNGLGTEDALIVNVVDIFDFNGSLIPGLHRFIGDNPVLLVGNKVDI 112
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W+ E + L + V LTS K + + I+K ++ RDVY++G
Sbjct: 113 LPKSLKKPKMVQWMRERAHEAGLRPVDVLLTSGKKPQEMQELLDTIEKYREDRDVYVVGV 172
Query: 281 ANVGKSAFINALLKK-MGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS IN ++++ +G +D S PGTTL I+I G L DTP
Sbjct: 173 TNVGKSTLINQIIQQTVGVQDVITT---------SQFPGTTLDKIEI-PLDDGHFLIDTP 222
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + +DL +APQ ++ + + + +E T+F GGL R
Sbjct: 223 GIIHRHQMAHYLGKKDLKIIAPQKEIKPKVYQLNAEQ--------------TLFLGGLAR 268
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D ++ ++ Y L ++ T AD FY+K +G L PP + AE + L
Sbjct: 269 FDYVQG-AKSSFIAYVSNDLNLHRTKTATADAFYEKHVGGLLQPPRADEVAE-FPEL--- 323
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV-EP 488
++FE + + +D+ +GLGWI+V EP
Sbjct: 324 ----VRFEFSVKEKTDIVFAGLGWITVTEP 349
>gi|410494094|ref|YP_006903940.1| GTP-binding protein engA [Streptococcus dysgalactiae subsp.
equisimilis AC-2713]
gi|417927491|ref|ZP_12570879.1| ribosome biogenesis GTPase YqeH [Streptococcus dysgalactiae subsp.
equisimilis SK1250]
gi|340765365|gb|EGR87891.1| ribosome biogenesis GTPase YqeH [Streptococcus dysgalactiae subsp.
equisimilis SK1250]
gi|410439254|emb|CCI61882.1| GTP-binding protein engA [Streptococcus dysgalactiae subsp.
equisimilis AC-2713]
Length = 372
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 116/393 (29%), Positives = 184/393 (46%), Gaps = 48/393 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG +QT + + G+ KK + + C RC L H + IT V
Sbjct: 6 CIGCGIQIQTEDKEKAGFTPAAAL---KKGMETGELYCQRCFRLRHYNEITDV------- 55
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ DE L + AL+V ++DI DFNGS + + N ++LV K D+
Sbjct: 56 ----HITDDEFLRLLHEVGDSDALVVNVIDIFDFNGSIIPGLSRFISGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK V W+ E ++ L L V LTS+++ I + I + + GRDVY++G
Sbjct: 112 LPKSVKDGKVTQWLTERAHEEGLRPLDVMLTSAQNKYAIKDLIERINELRNGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G++D S PGTTL I+I G ++DTP
Sbjct: 172 TNVGKSTLINAIIQEITGDKDVITT---------SRFPGTTLYKIEI-PLDDGSFIFDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + ++L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLSPKELKIVSPKKEIKPKTYQLNPEQ--------------TLFLGGLSR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + F+ L+++ AD FY K +G LTPP GK++ + L
Sbjct: 268 FDFINGERQGFTAFF-DNQLELHRTKLAGADAFYDKHVGTLLTPP-GKKELTAFPKL--- 322
Query: 460 RLLEIKFEDTERPASDVAISGLGWISVEPVRRS 492
++ E T D+ SGLGWI V + S
Sbjct: 323 ----VRHEFTIDQKMDIVFSGLGWIRVNGQKDS 351
>gi|258424024|ref|ZP_05686906.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus A9635]
gi|417889889|ref|ZP_12533968.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21200]
gi|418284085|ref|ZP_12896817.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21202]
gi|418308957|ref|ZP_12920538.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21194]
gi|418558984|ref|ZP_13123531.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21252]
gi|418889412|ref|ZP_13443545.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1524]
gi|257845645|gb|EEV69677.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus A9635]
gi|341855582|gb|EGS96426.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21200]
gi|365164949|gb|EHM56779.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21202]
gi|365236106|gb|EHM77008.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21194]
gi|371976334|gb|EHO93624.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21252]
gi|377752920|gb|EHT76838.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1524]
Length = 366
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 130/432 (30%), Positives = 209/432 (48%), Gaps = 70/432 (16%)
Query: 96 SAVASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKT-VLCGRCRLLSHGHMITAVG 154
S + C GCGAPLQ+ + + PG+V +H+ F+ V+C RC L + + + VG
Sbjct: 2 SDILKCIGCGAPLQSEDKNKPGFV--------PEHNMFRDDVICRRCFRLKNYNEVQDVG 53
Query: 155 GNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILV 214
+ +++ + LS L +K ++V +VD+ DF GSF+ ++ + G IIL
Sbjct: 54 -----------LESEDFLKLLSGLADKKGIVVNVVDVFDFEGSFINAVKRIVGNKKIILA 102
Query: 215 VTKVDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRD 274
K+DLLPK + V +W+ K L V L S++ GI + S I ++ D
Sbjct: 103 ANKLDLLPKQINKRRVKEWLKRTARKYGLEADDVVLISAEKGWGIDDLLSSIANIRENED 162
Query: 275 VYILGSANVGKSAFINALLK-KMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGG 333
VYI+G+ NVGKS IN L++ +GE+D S PGTTL I I
Sbjct: 163 VYIVGTTNVGKSTLINKLIEASVGEKDVVTT---------SRFPGTTLDMIDI-PLDETS 212
Query: 334 KLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIF 393
+YDTPG+ H+ +V ++L + P+ ++ + + + NE + T+F
Sbjct: 213 FMYDTPGIIQEHQMTHLVSEKELKIIMPKKEIKQRVYQL-------NEAQ-------TLF 258
Query: 394 WGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGW 453
+GGL RID + + F+ L ++ T+KA++ ++ +LG LTPP Q
Sbjct: 259 FGGLARIDYVSGGKRPLVCFFS-NDLNIHRTKTEKANDLWRNQLGDLLTPPGNPQ----- 312
Query: 454 KGLDRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHV 513
D + ++ E T + DV ISGLG+I++ P + I V V
Sbjct: 313 -NFDLNEVKAVRLE-TGKEKRDVMISGLGFITIGPGAKVI-----------------VRV 353
Query: 514 PKPVEVFVRNPM 525
PK V+V +RN +
Sbjct: 354 PKNVDVVLRNSI 365
>gi|82751199|ref|YP_416940.1| GTP-binding protein YqeH [Staphylococcus aureus RF122]
gi|82656730|emb|CAI81158.1| conserved hypothetical protein [Staphylococcus aureus RF122]
Length = 366
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 130/432 (30%), Positives = 209/432 (48%), Gaps = 70/432 (16%)
Query: 96 SAVASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKT-VLCGRCRLLSHGHMITAVG 154
S + C GCGAPLQ+ + + PG+V +H+ F+ V+C RC L + + + VG
Sbjct: 2 SDILKCIGCGAPLQSEDKNKPGFV--------PEHNMFRDDVICRRCFRLKNYNEVQDVG 53
Query: 155 GNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILV 214
+ +++ + LS L +K ++V +VD+ DF GSF+ ++ + G IIL
Sbjct: 54 -----------LESEDFLKLLSGLADKKGIVVNVVDVFDFEGSFINAVKRIVGNKKIILA 102
Query: 215 VTKVDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRD 274
K+DLLPK + V +W+ K L V L S++ GI + S I ++ D
Sbjct: 103 ANKLDLLPKQINKRRVKEWLKRTARKYGLEADDVVLISAEKGWGIDDLLSSIANIRENED 162
Query: 275 VYILGSANVGKSAFINALLK-KMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGG 333
VYI+G+ NVGKS IN L++ +GE+D S PGTTL I I
Sbjct: 163 VYIVGTTNVGKSTLINKLIEDSVGEKDVVTT---------SRFPGTTLDMIDI-PLDETS 212
Query: 334 KLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIF 393
+YDTPG+ H+ +V ++L + P+ ++ + + + NE + T+F
Sbjct: 213 FMYDTPGIIQDHQMTHLVSEKELKIIMPKKEIKQRVYQL-------NEAQ-------TLF 258
Query: 394 WGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGW 453
+GGL RID + + F+ L ++ T+KA++ ++ +LG LTPP Q
Sbjct: 259 FGGLARIDYVSGGKRPLVCFFS-NDLNIHRTKTEKANDLWRNQLGDLLTPPGNPQ----- 312
Query: 454 KGLDRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHV 513
D + ++ E T + DV ISGLG+I++ P + I V V
Sbjct: 313 -NFDLNEVKAVRLE-TGKEKRDVMISGLGFITIGPGAKVI-----------------VRV 353
Query: 514 PKPVEVFVRNPM 525
PK V+V +RN +
Sbjct: 354 PKNVDVVLRNSI 365
>gi|430750628|ref|YP_007213536.1| ribosome biogenesis GTPase YqeH [Thermobacillus composti KWC4]
gi|430734593|gb|AGA58538.1| ribosome biogenesis GTPase YqeH [Thermobacillus composti KWC4]
Length = 375
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 125/425 (29%), Positives = 191/425 (44%), Gaps = 63/425 (14%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG LQ+ D PGYV ++ + +C RC + H + +T V
Sbjct: 13 CSGCGVRLQSESPDKPGYV-------PEQALGREDAICRRCFRIRHYNDVTHVA------ 59
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
V D+ LS + +L+V +VD+ DF GS ++ ++ G NP++LVV K+DL
Sbjct: 60 -----VDQDDFLRMLSGIAGTDSLVVHIVDLFDFEGSVISGLQRFVGNNPVLLVVNKIDL 114
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK T++N V +WV L + L S+ G V IQ + GRD+Y++G+
Sbjct: 115 LPKSTNWNRVRNWVQRQAKLLGLKPAEIVLCSAAKRTGFDRVIEAIQALRGGRDIYVVGA 174
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS IN L++ + D + S PGTTL I+I + DTPG
Sbjct: 175 TNVGKSTLINRLIRDYSDLDRELTV--------SRYPGTTLDQIRI-PLDDSRYIIDTPG 225
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ +R V L L P+ L+ + + NE + T+F+G L R
Sbjct: 226 IVYPYRLTETVPKGVLQRLLPEKPLKPLVYQL-------NERQ-------TLFFGALARF 271
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D ++ P++ T Y SL V+ ++ADE Y + G L PP A+ +
Sbjct: 272 DFVRGEPQS-FTLYVSPSLYVHRTKLERADEVYAEHKGELLAPP----NADELDAIAPWT 326
Query: 461 LLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVEVF 520
++ R +D++ISGLGWI ++S + V+ PK V V
Sbjct: 327 RHSLRIPPGSR--TDISISGLGWIRA---------------NSSAGAFVEVYAPKGVHVI 369
Query: 521 VRNPM 525
+R M
Sbjct: 370 LREAM 374
>gi|450067533|ref|ZP_21846692.1| GTP-binding protein YqeH [Streptococcus mutans NLML9]
gi|449207955|gb|EMC08597.1| GTP-binding protein YqeH [Streptococcus mutans NLML9]
Length = 368
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 112/387 (28%), Positives = 192/387 (49%), Gaps = 48/387 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT+ + GY E K + + C RC L H + IT V
Sbjct: 6 CIGCGAQIQTTAKEQAGYTPKSALE---KGLESGKIYCQRCFRLRHYNEITDV------- 55
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
+S ++ + L + +AL+V ++DI DFNGS + ++ ++ ++LV K D+
Sbjct: 56 ----HISDNDFLKFLHEVGDSRALVVNVIDIFDFNGSVIPGLQRFISSSDLLLVGNKADI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W++E ++ L L + LTS+++ I + ++I++ ++GRDVY++G
Sbjct: 112 LPKSVKSGKITQWLMERAHEEGLRPLDLILTSAQNKWAIKELIAKIEELRQGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G+++ S PGTTL I+I G ++DTP
Sbjct: 172 TNVGKSTLINAIIQEITGDKNIITT---------SRFPGTTLDKIEI-PLNDGSYIFDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + + L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLSDKALKYISPKKEIKPKTYQLNPEQ--------------TLFLGGLAR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + T Y +L+++ AD FY K +G LTPP K+ A K
Sbjct: 268 FDYV-TGDKQGFTAYFDNNLKLHRTKLAGADTFYDKHIGSLLTPPDKKEMAAFPK----- 321
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
++ E T + +D+ SGLGWI +
Sbjct: 322 ---LVRHEFTIKEKTDLVFSGLGWIRI 345
>gi|390631126|ref|ZP_10259093.1| Ribosome biogenesis GTPase YqeH [Weissella confusa LBAE C39-2]
gi|390483686|emb|CCF31441.1| Ribosome biogenesis GTPase YqeH [Weissella confusa LBAE C39-2]
Length = 380
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 121/390 (31%), Positives = 187/390 (47%), Gaps = 53/390 (13%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT GY P + LK ++ VLC RC L H + I V
Sbjct: 17 CIGCGALIQTEHKGELGYA-PMSALLKGFENE--EVLCQRCFRLRHYNEIQPVD------ 67
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ R L+ + +L+V ++D+ DF+GS + + G NP++LV KVD+
Sbjct: 68 -----LTDDDFRLLLNEISATDSLVVYVMDVFDFSGSLIPGLHRFVGNNPVLLVGNKVDV 122
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + + DW+ + L + V LTS KS + + I+K ++GR VY++G
Sbjct: 123 LPKSLKRSKIKDWMRQQANIAGLRPVDVQLTSGKSGDDVPALMDMIEKYREGRSVYVVGV 182
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQI----DAFLGGGKLY 336
NVGKS IN ++K A K S PGTTL I+I D F +
Sbjct: 183 TNVGKSTLINQIIKD-------ATGDNKDVITTSRFPGTTLDRIEIPLDDDTF-----II 230
Query: 337 DTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGG 396
DTPG+ + A + +DL ++PQ L+ +++ + + T+F G
Sbjct: 231 DTPGIIHQDQMAHYLTPKDLKYVSPQKELKPKTYQLNPQQ--------------TLFMGA 276
Query: 397 LVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGL 456
L R D ++ + +T Y +L ++ +KADEFY K G L PP + + L
Sbjct: 277 LARFDFIQG-EKAGITAYFENNLMIHRTKLEKADEFYSKHAGELLLPPT-TENLDMLPPL 334
Query: 457 DRERLLEIKFEDTERPASDVAISGLGWISV 486
R +F+ TE+ +D+ I GLGWI+V
Sbjct: 335 QRH-----EFKVTEK--TDIVIDGLGWITV 357
>gi|21283277|ref|NP_646365.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus MW2]
gi|49486431|ref|YP_043652.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus
MSSA476]
gi|57651989|ref|YP_186493.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus COL]
gi|87160501|ref|YP_494251.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|88195406|ref|YP_500210.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus NCTC
8325]
gi|151221711|ref|YP_001332533.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus str.
Newman]
gi|161509825|ref|YP_001575484.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|221141132|ref|ZP_03565625.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus str.
JKD6009]
gi|258450575|ref|ZP_05698637.1| GTP-binding protein YqeH [Staphylococcus aureus A5948]
gi|262048596|ref|ZP_06021479.1| hypothetical protein SAD30_0992 [Staphylococcus aureus D30]
gi|262051255|ref|ZP_06023479.1| hypothetical protein SA930_1686 [Staphylococcus aureus 930918-3]
gi|282916867|ref|ZP_06324625.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus D139]
gi|282920145|ref|ZP_06327870.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus A9765]
gi|283770672|ref|ZP_06343564.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus H19]
gi|284024655|ref|ZP_06379053.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus 132]
gi|294848627|ref|ZP_06789373.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus A9754]
gi|297207684|ref|ZP_06924119.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus ATCC 51811]
gi|300911765|ref|ZP_07129208.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus TCH70]
gi|379014805|ref|YP_005291041.1| GTPase YqeH [Staphylococcus aureus subsp. aureus VC40]
gi|379021378|ref|YP_005298040.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus M013]
gi|384547829|ref|YP_005737082.1| GTP-binding protein [Staphylococcus aureus subsp. aureus ED133]
gi|384862197|ref|YP_005744917.1| GTPase family protein [Staphylococcus aureus subsp. aureus str.
JKD6008]
gi|384870137|ref|YP_005752851.1| GTP-binding protein [Staphylococcus aureus subsp. aureus T0131]
gi|385781882|ref|YP_005758053.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 11819-97]
gi|386831206|ref|YP_006237860.1| putative GTPase [Staphylococcus aureus subsp. aureus HO 5096 0412]
gi|387780688|ref|YP_005755486.1| putative GTPase [Staphylococcus aureus subsp. aureus LGA251]
gi|415686213|ref|ZP_11450350.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus
CGS01]
gi|416842867|ref|ZP_11905194.1| GTP-binding protein YqeH [Staphylococcus aureus O11]
gi|416846547|ref|ZP_11906596.1| GTP-binding protein YqeH [Staphylococcus aureus O46]
gi|417649327|ref|ZP_12299131.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21189]
gi|417653518|ref|ZP_12303249.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21193]
gi|417799994|ref|ZP_12447126.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21310]
gi|417901075|ref|ZP_12544952.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21266]
gi|418285656|ref|ZP_12898324.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21209]
gi|418313226|ref|ZP_12924720.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21334]
gi|418316433|ref|ZP_12927871.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21340]
gi|418562587|ref|ZP_13127044.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21262]
gi|418571885|ref|ZP_13136105.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21283]
gi|418574394|ref|ZP_13138563.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21333]
gi|418579521|ref|ZP_13143616.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1114]
gi|418599941|ref|ZP_13163415.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21343]
gi|418641781|ref|ZP_13203986.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus IS-24]
gi|418648338|ref|ZP_13210382.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus IS-88]
gi|418650659|ref|ZP_13212677.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus IS-91]
gi|418655646|ref|ZP_13217495.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus IS-105]
gi|418659237|ref|ZP_13220925.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus IS-111]
gi|418873209|ref|ZP_13427519.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus IS-125]
gi|418903903|ref|ZP_13457944.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1770]
gi|418912207|ref|ZP_13466188.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG547]
gi|418925856|ref|ZP_13479758.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG2018]
gi|418928946|ref|ZP_13482832.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1612]
gi|418934567|ref|ZP_13488389.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIGC128]
gi|418948289|ref|ZP_13500606.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus IS-157]
gi|418950693|ref|ZP_13502844.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus IS-160]
gi|418988663|ref|ZP_13536335.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1835]
gi|419773172|ref|ZP_14299183.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CO-23]
gi|422742619|ref|ZP_16796622.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus MRSA177]
gi|422746109|ref|ZP_16800042.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus MRSA131]
gi|424785432|ref|ZP_18212235.1| GTP-binding protein YqeH [Staphylococcus aureus CN79]
gi|440707399|ref|ZP_20888098.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21282]
gi|440735047|ref|ZP_20914658.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus DSM 20231]
gi|448741172|ref|ZP_21723142.1| GTP-binding protein YqeH [Staphylococcus aureus KT/314250]
gi|448745071|ref|ZP_21726945.1| GTP-binding protein YqeH [Staphylococcus aureus KT/Y21]
gi|21204717|dbj|BAB95413.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
MW2]
gi|49244874|emb|CAG43335.1| putative GTPase [Staphylococcus aureus subsp. aureus MSSA476]
gi|57286175|gb|AAW38269.1| GTP-binding protein, putative [Staphylococcus aureus subsp. aureus
COL]
gi|87126475|gb|ABD20989.1| putative GTP-binding protein [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|87202964|gb|ABD30774.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
NCTC 8325]
gi|150374511|dbj|BAF67771.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
str. Newman]
gi|160368634|gb|ABX29605.1| GTP-binding protein [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|257861733|gb|EEV84532.1| GTP-binding protein YqeH [Staphylococcus aureus A5948]
gi|259160892|gb|EEW45912.1| hypothetical protein SA930_1686 [Staphylococcus aureus 930918-3]
gi|259163243|gb|EEW47802.1| hypothetical protein SAD30_0992 [Staphylococcus aureus D30]
gi|282319354|gb|EFB49706.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus D139]
gi|282594493|gb|EFB99478.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus A9765]
gi|283460819|gb|EFC07909.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus H19]
gi|294824653|gb|EFG41076.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus A9754]
gi|296887701|gb|EFH26599.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus ATCC 51811]
gi|298694878|gb|ADI98100.1| GTP-binding protein [Staphylococcus aureus subsp. aureus ED133]
gi|300886011|gb|EFK81213.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus TCH70]
gi|302751426|gb|ADL65603.1| GTPase family protein [Staphylococcus aureus subsp. aureus str.
JKD6008]
gi|315198706|gb|EFU29034.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus
CGS01]
gi|320140517|gb|EFW32371.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus MRSA131]
gi|320144055|gb|EFW35824.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus MRSA177]
gi|323438562|gb|EGA96309.1| GTP-binding protein YqeH [Staphylococcus aureus O11]
gi|323442801|gb|EGB00426.1| GTP-binding protein YqeH [Staphylococcus aureus O46]
gi|329314272|gb|AEB88685.1| GTP-binding protein [Staphylococcus aureus subsp. aureus T0131]
gi|329728433|gb|EGG64870.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21189]
gi|329733209|gb|EGG69546.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21193]
gi|334272526|gb|EGL90891.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21310]
gi|341846234|gb|EGS87431.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21266]
gi|344177790|emb|CCC88269.1| putative GTPase [Staphylococcus aureus subsp. aureus LGA251]
gi|359830687|gb|AEV78665.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus M013]
gi|364522871|gb|AEW65621.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 11819-97]
gi|365169466|gb|EHM60714.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21209]
gi|365236497|gb|EHM77386.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21334]
gi|365241117|gb|EHM81872.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21340]
gi|371973691|gb|EHO91039.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21262]
gi|371978377|gb|EHO95626.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21283]
gi|371979121|gb|EHO96356.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21333]
gi|374363502|gb|AEZ37607.1| GTPase YqeH [Staphylococcus aureus subsp. aureus VC40]
gi|374395530|gb|EHQ66793.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21343]
gi|375018236|gb|EHS11816.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus IS-24]
gi|375026251|gb|EHS19634.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus IS-88]
gi|375027945|gb|EHS21303.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus IS-91]
gi|375036139|gb|EHS29220.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus IS-105]
gi|375036235|gb|EHS29313.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus IS-111]
gi|375366400|gb|EHS70397.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus IS-125]
gi|375373050|gb|EHS76756.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus IS-157]
gi|375376169|gb|EHS79717.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus IS-160]
gi|377697548|gb|EHT21903.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1114]
gi|377717756|gb|EHT41931.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1835]
gi|377722464|gb|EHT46590.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG547]
gi|377738858|gb|EHT62867.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1612]
gi|377742918|gb|EHT66903.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1770]
gi|377744925|gb|EHT68902.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG2018]
gi|377770661|gb|EHT94422.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIGC128]
gi|383972996|gb|EID89017.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CO-23]
gi|385196598|emb|CCG16227.1| putative GTPase [Staphylococcus aureus subsp. aureus HO 5096 0412]
gi|421956842|gb|EKU09171.1| GTP-binding protein YqeH [Staphylococcus aureus CN79]
gi|436431142|gb|ELP28496.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus DSM 20231]
gi|436506155|gb|ELP41994.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21282]
gi|445548086|gb|ELY16342.1| GTP-binding protein YqeH [Staphylococcus aureus KT/314250]
gi|445561610|gb|ELY17803.1| GTP-binding protein YqeH [Staphylococcus aureus KT/Y21]
Length = 366
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 130/432 (30%), Positives = 209/432 (48%), Gaps = 70/432 (16%)
Query: 96 SAVASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKT-VLCGRCRLLSHGHMITAVG 154
S + C GCGAPLQ+ + + PG+V +H+ F+ V+C RC L + + + VG
Sbjct: 2 SDILKCIGCGAPLQSEDKNKPGFV--------PEHNMFRDDVICRRCFRLKNYNEVQDVG 53
Query: 155 GNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILV 214
+ +++ + LS L +K ++V +VD+ DF GSF+ ++ + G IIL
Sbjct: 54 -----------LESEDFLKLLSGLADKKGIVVNVVDVFDFEGSFINAVKRIVGNKKIILA 102
Query: 215 VTKVDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRD 274
K+DLLPK + V +W+ K L V L S++ GI + S I ++ D
Sbjct: 103 ANKLDLLPKQINKRRVKEWLKRTARKYGLEADDVVLISAEKGWGIDDLLSSIANIRENED 162
Query: 275 VYILGSANVGKSAFINALLK-KMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGG 333
VYI+G+ NVGKS IN L++ +GE+D S PGTTL I I
Sbjct: 163 VYIVGTTNVGKSTLINKLIEASVGEKDVVTT---------SRFPGTTLDMIDI-PLDETS 212
Query: 334 KLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIF 393
+YDTPG+ H+ +V ++L + P+ ++ + + + NE + T+F
Sbjct: 213 FMYDTPGIIQDHQMTHLVSEKELKIIMPKKEIKQRVYQL-------NEAQ-------TLF 258
Query: 394 WGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGW 453
+GGL RID + + F+ L ++ T+KA++ ++ +LG LTPP Q
Sbjct: 259 FGGLARIDYVSGGKRPLVCFFS-NDLNIHRTKTEKANDLWRNQLGDLLTPPGNPQ----- 312
Query: 454 KGLDRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHV 513
D + ++ E T + DV ISGLG+I++ P + I V V
Sbjct: 313 -NFDLNEVKAVRLE-TGKEKRDVMISGLGFITIGPGAKVI-----------------VRV 353
Query: 514 PKPVEVFVRNPM 525
PK V+V +RN +
Sbjct: 354 PKNVDVVLRNSI 365
>gi|195978787|ref|YP_002124031.1| GTP-binding protein YqeH [Streptococcus equi subsp. zooepidemicus
MGCS10565]
gi|195975492|gb|ACG63018.1| GTPase [Streptococcus equi subsp. zooepidemicus MGCS10565]
Length = 372
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 120/388 (30%), Positives = 186/388 (47%), Gaps = 50/388 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG +QT+ G+ K + + V C RC L H + IT V
Sbjct: 6 CIGCGIQIQTTRKQEAGFTPAAAL---AKGIEAREVYCQRCFRLRHYNDITDV------- 55
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ DE + L + AL+V +VDI DFNGS + + N I+LV K D+
Sbjct: 56 ----HITDDEFLKLLHEVGDSDALVVNVVDIFDFNGSVIPGLSRFVAGNDILLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + V W+ E ++ L L V LTS+++ I + I + ++ RDVY++G
Sbjct: 112 LPKSVKDSKVTQWLTERAHEEGLRPLDVLLTSAQNKYAIKELIERIDQLRQRRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G++D S PGTTL I+I G ++DTP
Sbjct: 172 TNVGKSTLINAIIQEITGDKDVITT---------SRFPGTTLDKIEI-PLDDGSFIFDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + A++L ++P+ ++ +++ + + T+F GGL R
Sbjct: 222 GIIHRHQMAHYLSAKNLKFISPKKEIKPKTYQLNPKQ--------------TLFLGGLAR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDR- 458
D + T Y L ++ + AD FY K+ G+ LTPP KQ+ + + L R
Sbjct: 268 FDFISG-ERQGFTAYFDNQLLLHRTKLEGADAFYDKQAGLLLTPP-DKQELDDFPRLVRH 325
Query: 459 ERLLEIKFEDTERPASDVAISGLGWISV 486
E LL+ K D+ SGLGWI V
Sbjct: 326 EFLLDQKM--------DIVFSGLGWICV 345
>gi|408401050|ref|YP_006859013.1| GTP-binding protein [Streptococcus dysgalactiae subsp. equisimilis
RE378]
gi|407967278|dbj|BAM60516.1| GTP-binding protein [Streptococcus dysgalactiae subsp. equisimilis
RE378]
Length = 372
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 116/393 (29%), Positives = 183/393 (46%), Gaps = 48/393 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG +QT + + G+ KK + + C RC L H + IT V
Sbjct: 6 CIGCGIQIQTEDKEKAGFTPAAAL---KKGMETGELYCQRCFRLRHYNEITDV------- 55
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ DE L + AL+V ++DI DFNGS + + N ++LV K D+
Sbjct: 56 ----HITDDEFLRLLHEVGDSDALVVNVIDIFDFNGSIIPGLSRFISGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK V W+ E ++ L L V LTS+++ I + I + + GRDVY++G
Sbjct: 112 LPKSVKDGKVTQWLTERAHEEGLRPLDVMLTSAQNKYAIKDLIERINELRNGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G +D S PGTTL I+I G ++DTP
Sbjct: 172 TNVGKSTLINAIIQEITGNKDVITT---------SRFPGTTLDKIEI-PLDDGTFIFDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + ++L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLSPKELKIVSPKKEIKPKTYQLNPEQ--------------TLFLGGLSR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + F+ L+++ AD FY K +G LTPP GK++ + L
Sbjct: 268 FDFINGERQGFTAFF-DNQLELHRTKLAGADAFYDKHVGTLLTPP-GKKELTAFPKL--- 322
Query: 460 RLLEIKFEDTERPASDVAISGLGWISVEPVRRS 492
++ E T D+ SGLGWI V + S
Sbjct: 323 ----VRHEFTIDQKMDIVFSGLGWIRVNGQKDS 351
>gi|414564751|ref|YP_006043712.1| GTP-binding protein [Streptococcus equi subsp. zooepidemicus ATCC
35246]
gi|338847816|gb|AEJ26028.1| GTP-binding protein [Streptococcus equi subsp. zooepidemicus ATCC
35246]
Length = 372
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 116/387 (29%), Positives = 183/387 (47%), Gaps = 48/387 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG +QT+ G+ K + + + C RC L H + IT V
Sbjct: 6 CIGCGIQIQTTRKQEAGFTPAAAL---AKGIEAREIYCQRCFRLRHYNDITDV------- 55
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ +E L + AL+V ++DI DFNGS + + N ++LV K D+
Sbjct: 56 ----HITDEEFLRLLHEVGDSDALVVNVIDIFDFNGSVIPGLSRFVAGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + V W+ E ++ L L V LTS+++ I + I + ++GRDVY++G
Sbjct: 112 LPKSVKDSKVTQWLTERAHEEGLRPLDVLLTSAQNKYAIKELIERIDQLRQGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G++D S PGTTL I+I G ++DTP
Sbjct: 172 TNVGKSTLINAIIQEITGDKDVITT---------SRFPGTTLDKIEI-PLDDGSFIFDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + A++L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLSAKNLKFISPKKEIKPKTYQLNPEQ--------------TLFLGGLAR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + T Y L ++ + AD FY K+ G LTPP K+ + + + E
Sbjct: 268 FDFISG-ERQGFTAYFDNQLLLHRTKLEGADAFYDKQAGQLLTPPDKKELDDFPRLVRHE 326
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
LL+ K DV SGLGWI V
Sbjct: 327 FLLDQKV--------DVVFSGLGWIRV 345
>gi|49483844|ref|YP_041068.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus
MRSA252]
gi|282904178|ref|ZP_06312066.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus C160]
gi|282906005|ref|ZP_06313860.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus Btn1260]
gi|282908916|ref|ZP_06316734.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus WW2703/97]
gi|283958360|ref|ZP_06375811.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus A017934/97]
gi|295428174|ref|ZP_06820806.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus EMRSA16]
gi|297590860|ref|ZP_06949498.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus MN8]
gi|415682399|ref|ZP_11447715.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus
CGS00]
gi|418564794|ref|ZP_13129215.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21264]
gi|418582523|ref|ZP_13146601.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1605]
gi|418597137|ref|ZP_13160670.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21342]
gi|418601018|ref|ZP_13164466.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21345]
gi|418892326|ref|ZP_13446439.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1176]
gi|418898231|ref|ZP_13452301.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIGC341D]
gi|418901101|ref|ZP_13455157.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1214]
gi|418909448|ref|ZP_13463444.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG149]
gi|418917494|ref|ZP_13471453.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1267]
gi|418923278|ref|ZP_13477194.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1233]
gi|418982602|ref|ZP_13530310.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1242]
gi|418986268|ref|ZP_13533953.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1500]
gi|49241973|emb|CAG40668.1| putative GTPase [Staphylococcus aureus subsp. aureus MRSA252]
gi|282327180|gb|EFB57475.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus WW2703/97]
gi|282331297|gb|EFB60811.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus Btn1260]
gi|282595796|gb|EFC00760.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus C160]
gi|283790509|gb|EFC29326.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus A017934/97]
gi|295128532|gb|EFG58166.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus EMRSA16]
gi|297575746|gb|EFH94462.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus MN8]
gi|315195499|gb|EFU25886.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus
CGS00]
gi|371975931|gb|EHO93223.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21264]
gi|374395373|gb|EHQ66640.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21342]
gi|374400265|gb|EHQ71384.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21345]
gi|377702498|gb|EHT26820.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1214]
gi|377704312|gb|EHT28622.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1500]
gi|377704883|gb|EHT29192.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1242]
gi|377710933|gb|EHT35171.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1605]
gi|377730620|gb|EHT54687.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1176]
gi|377735237|gb|EHT59273.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1233]
gi|377750668|gb|EHT74606.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1267]
gi|377752095|gb|EHT76019.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG149]
gi|377761266|gb|EHT85142.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIGC341D]
Length = 366
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 130/432 (30%), Positives = 208/432 (48%), Gaps = 70/432 (16%)
Query: 96 SAVASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQF-KTVLCGRCRLLSHGHMITAVG 154
S + C GCGAPLQ+ + + PG+V +H+ F V+C RC L + + + VG
Sbjct: 2 SDILKCIGCGAPLQSEDKNKPGFV--------PEHNMFGDDVICRRCFRLKNYNEVQDVG 53
Query: 155 GNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILV 214
+ +++ + LS L +K ++V +VD+ DF GSF+ ++ + G IIL
Sbjct: 54 -----------LESEDFLKLLSGLADKKGIVVNVVDVFDFEGSFINAVKRIVGNKKIILA 102
Query: 215 VTKVDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRD 274
K+DLLPK + V +W+ K L V L S++ GI + S I ++ D
Sbjct: 103 ANKLDLLPKQINKRRVKEWLKRTARKYSLEADDVVLISAEKGWGIDDLLSSIANIRENED 162
Query: 275 VYILGSANVGKSAFINALLK-KMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGG 333
VYI+G+ NVGKS IN L++ +GE+D S PGTTL I I
Sbjct: 163 VYIVGTTNVGKSTLINKLIEASVGEKDVVTT---------SRFPGTTLDMIDI-PLDETS 212
Query: 334 KLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIF 393
+YDTPG+ H+ +V ++L + P+ ++ + + + NE + T+F
Sbjct: 213 FMYDTPGIIQDHQMTHLVSEKELKIIMPKKEIKQRVYQL-------NEAQ-------TLF 258
Query: 394 WGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGW 453
+GGL RID + + F+ L ++ T+KA++ ++ +LG LTPP Q
Sbjct: 259 FGGLARIDYVSGGKRPLICFFS-NDLNIHRTKTEKANDLWRNQLGDLLTPPGNLQ----- 312
Query: 454 KGLDRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHV 513
D + ++ E T + DV ISGLG+I++ P + I V V
Sbjct: 313 -NFDLNEVKAVRLE-TGKEKRDVMISGLGFITIGPGAKVI-----------------VRV 353
Query: 514 PKPVEVFVRNPM 525
PK V+V +RN +
Sbjct: 354 PKNVDVVLRNSI 365
>gi|16803531|ref|NP_465016.1| GTP-binding protein YqeH [Listeria monocytogenes EGD-e]
gi|386043802|ref|YP_005962607.1| ribosome biogenesis GTPase YqeH [Listeria monocytogenes 10403S]
gi|386050467|ref|YP_005968458.1| GTP-binding protein YqeH [Listeria monocytogenes FSL R2-561]
gi|404283983|ref|YP_006684880.1| GTPase [Listeria monocytogenes SLCC2372]
gi|404410792|ref|YP_006696380.1| GTPase [Listeria monocytogenes SLCC5850]
gi|405758539|ref|YP_006687815.1| GTPase [Listeria monocytogenes SLCC2479]
gi|16410920|emb|CAC99569.1| lmo1491 [Listeria monocytogenes EGD-e]
gi|345537036|gb|AEO06476.1| ribosome biogenesis GTPase YqeH [Listeria monocytogenes 10403S]
gi|346424313|gb|AEO25838.1| GTP-binding protein YqeH [Listeria monocytogenes FSL R2-561]
gi|404230618|emb|CBY52022.1| putative GTPase [Listeria monocytogenes SLCC5850]
gi|404233485|emb|CBY54888.1| putative GTPase [Listeria monocytogenes SLCC2372]
gi|404236421|emb|CBY57823.1| putative GTPase [Listeria monocytogenes SLCC2479]
Length = 366
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 115/386 (29%), Positives = 182/386 (47%), Gaps = 50/386 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT + D GY K + V+C RC L H + I V
Sbjct: 7 CIGCGAVIQTEDPDKIGYA-------PKSSLNNEQVICKRCFRLKHYNEIQDVA------ 53
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ L+ + ++ALIV +VDI DF+GS+L + AG+NP++LV K D+
Sbjct: 54 -----LTDDDFLRILNQISSKQALIVYVVDIFDFDGSWLPGLPRFAGSNPVLLVGNKEDV 108
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + + W+ ++ L V L S++ G + +I + + G+DVY++G
Sbjct: 109 LPKSLKRDKLTRWMRTRAKEQGLAATDVVLVSAEKGHGFDTLLEKIDELRNGQDVYVVGC 168
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS IN ++K+ + +Q PGTTL I+I G L DTPG
Sbjct: 169 TNVGKSTLINRIIKQASGENNVITTSQ--------FPGTTLDKIEI-PLADGNVLVDTPG 219
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ HH+ A + L A+ P+ ++ F + E T+F G L R+
Sbjct: 220 IINHHQMAHFIDTTTLKAITPKKEVKPAVFQLNEEQ--------------TLFLGALARL 265
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D + L Y +L ++ +KA+ Y+K+ G+ L PP E K L +
Sbjct: 266 DYVSG-GRKSLVVYVSNNLPIHRTKLEKAEALYEKQAGLVLQPP----TEEDMKTL--PK 318
Query: 461 LLEIKFEDTERPASDVAISGLGWISV 486
L+ F T + +D+ SGLGW+++
Sbjct: 319 LVPYSF--TVKEKADIVFSGLGWVTI 342
>gi|225871191|ref|YP_002747138.1| GTP-binding protein YqeH [Streptococcus equi subsp. equi 4047]
gi|225700595|emb|CAW95118.1| GTP-binding protein [Streptococcus equi subsp. equi 4047]
Length = 372
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 116/387 (29%), Positives = 183/387 (47%), Gaps = 48/387 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG +QT+ G+ K + + + C RC L H + IT V
Sbjct: 6 CIGCGIQIQTTRKQEAGFTPAAAL---VKGIEAREIYCQRCFRLRHYNDITDV------- 55
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ +E L + AL+V ++DI DFNGS + + N ++LV K D+
Sbjct: 56 ----HITDEEFLRLLHEVGDSDALVVNVIDIFDFNGSVIPGLSRFVAGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + V W+ E ++ L L V LTS+++ I + I + ++GRDVY++G
Sbjct: 112 LPKSVKDSKVTQWLTERAHEEGLRPLDVLLTSAQNKYAIKELIERIDQLRQGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G++D S PGTTL I+I G ++DTP
Sbjct: 172 TNVGKSTLINAIIQEITGDKDVITT---------SRFPGTTLDKIEI-PLDDGSFIFDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + A++L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLSAKNLKFISPKKEIKPKTYQLNPEQ--------------TLFLGGLAR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + T Y L ++ + AD FY K+ G LTPP K+ + + + E
Sbjct: 268 FDFISG-ERQGFTAYFDNQLLLHRTKLEGADAFYDKQAGQLLTPPDKKELDDFPRLVRHE 326
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
LL+ K DV SGLGWI V
Sbjct: 327 FLLDQKV--------DVVFSGLGWIRV 345
>gi|222151493|ref|YP_002560649.1| GTP-binding protein YqeH [Macrococcus caseolyticus JCSC5402]
gi|222120618|dbj|BAH17953.1| conserved hypothetical protein [Macrococcus caseolyticus JCSC5402]
Length = 396
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 122/423 (28%), Positives = 201/423 (47%), Gaps = 69/423 (16%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA LQ+ + + PGYV + LKK+ V+C RC L H + I V
Sbjct: 38 CIGCGAELQSDDQNKPGYVPASS--LKKED-----VICKRCFRLKHYNEIQDVN------ 84
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
+++D+ L+ L ++ +IV ++D+ DF GS++ ++ + G +I+ K+DL
Sbjct: 85 -----MTSDDFLTMLNALSEKQGIIVNVIDVFDFQGSWINGLKRIVGNKKVIIAANKMDL 139
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + V W+ + +N V L S++ GI + I+ + +DVY++G+
Sbjct: 140 LPKLINKRRVKLWIEKQAKALGMNPDDVVLISAQKNHGIEELLESIETLRANQDVYVVGT 199
Query: 281 ANVGKSAFINALLK-KMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS IN L++ +GE+D S PGTTL I I L+DTP
Sbjct: 200 TNVGKSTLINKLIETSVGEKDVITT---------SHFPGTTLDLIDI-PLDEHSFLFDTP 249
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ V ++L + P+ ++ ++F + NE G T+F GGLVR
Sbjct: 250 GIIQAHQMTHYVTDKELKVIMPKQEIKPRNFQL-------NE-------GQTLFLGGLVR 295
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
+D + L + L ++ TD A E + +++G LTPP G D +
Sbjct: 296 VDYVSG-GRRSLNCFVSNLLHIHRTKTDNAQELWYRQIGDLLTPP-------GSGEFDFD 347
Query: 460 RLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVEV 519
+ +++ E D+ ISGLG+I+V+ + + VH PK V+V
Sbjct: 348 NVKQVQLSVKEE-KQDIIISGLGFITVDKGAQ-----------------IVVHAPKQVDV 389
Query: 520 FVR 522
++R
Sbjct: 390 YLR 392
>gi|413926892|gb|AFW66824.1| hypothetical protein ZEAMMB73_244891 [Zea mays]
Length = 206
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 90/137 (65%), Positives = 112/137 (81%), Gaps = 5/137 (3%)
Query: 59 TRGDRFLELQKAKEAAKVVV-----RDSKKKRKKKDKVLKVNSAVASCYGCGAPLQTSES 113
TRGDRFL Q A EAA V+ +++++K+ + + S +ASCYGCGAPLQT+E
Sbjct: 51 TRGDRFLGRQLATEAAARVLAPEDADRRRRRKEKRRALARKPSGLASCYGCGAPLQTAEE 110
Query: 114 DAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYAGGKQFVSADELRE 173
APGYVDPDTY+LKK+HHQ +TVLCGRC+LLSHGHM+TAVGG+GGY GGK+FVSA++LRE
Sbjct: 111 AAPGYVDPDTYQLKKRHHQLRTVLCGRCKLLSHGHMVTAVGGHGGYPGGKKFVSAEQLRE 170
Query: 174 KLSHLRREKALIVKLVD 190
KLS+LR EKALIVKLV+
Sbjct: 171 KLSYLRHEKALIVKLVN 187
>gi|73662470|ref|YP_301251.1| GTP-binding protein YqeH [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
gi|72494985|dbj|BAE18306.1| putative GTPase [Staphylococcus saprophyticus subsp. saprophyticus
ATCC 15305]
Length = 368
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 132/433 (30%), Positives = 210/433 (48%), Gaps = 72/433 (16%)
Query: 96 SAVASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGG 155
+ + C GCGAPLQ+ + DAPGYV P++ K+ V+C RC L + + + VG
Sbjct: 4 TEILKCIGCGAPLQSEDLDAPGYV-PESSLYKED------VICKRCFRLKNYNEVQDVG- 55
Query: 156 NGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVV 215
+ +++ L+ L +K ++V +VD+ DF GSF+ I+ + G IILV
Sbjct: 56 ----------LDSEDFLNLLNGLADKKGIVVNVVDVFDFEGSFINAIKRIVGNKQIILVG 105
Query: 216 TKVDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDV 275
K+DLLPK + V +W+ + K L+ V L S++ GI + + I + DV
Sbjct: 106 NKLDLLPKQINKRRVKEWLKKTARKYGLDAEDVILISAEKNEGIEDLLNAINTLRNNDDV 165
Query: 276 YILGSANVGKSAFINALLKK-MGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGK 334
YI+G+ NVGKS IN L+++ +GE++ S PGTTL I I
Sbjct: 166 YIVGTTNVGKSTLINKLIERSVGEKNVVTT---------SRFPGTTLDMIDI-PLDDTSF 215
Query: 335 LYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFW 394
+YDTPGV H+ V ++L + P+ ++ + + + NE G T+F+
Sbjct: 216 MYDTPGVIQEHQMTHYVTEKELKTIMPKKEVKQRVYQL-------NE-------GQTLFF 261
Query: 395 GGLVRIDLLK--VLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEG 452
GGL RID + P C Y L ++ T+ A+E ++ +LG L+PP
Sbjct: 262 GGLARIDYISGGKRPLVC---YFSNDLNIHRTKTENANELWRNQLGDVLSPP------NN 312
Query: 453 WKGLDRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVH 512
D + + ++ E T + DV ISGLG+I+++ + I V
Sbjct: 313 PDHFDLQNVKAVRLE-TGKEKRDVMISGLGFITIDEGAKII-----------------VR 354
Query: 513 VPKPVEVFVRNPM 525
VPK V+V +RN +
Sbjct: 355 VPKNVDVVLRNSI 367
>gi|449947225|ref|ZP_21807268.1| GTP-binding protein YqeH [Streptococcus mutans 11SSST2]
gi|449168888|gb|EMB71686.1| GTP-binding protein YqeH [Streptococcus mutans 11SSST2]
Length = 368
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 112/387 (28%), Positives = 191/387 (49%), Gaps = 48/387 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT+ + GY K + + C RC L H + IT V
Sbjct: 6 CIGCGAQIQTTAKEQAGYTPKSAL---GKGLESGKIYCQRCFRLRHYNEITDV------- 55
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
+S D+ + L + +AL+V ++DI DFNGS + ++ ++ ++LV K D+
Sbjct: 56 ----HISDDDFLKLLHEVGDSRALVVNVIDIFDFNGSVIPGLQRFISSSDLLLVGNKADI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W++E ++ L L + LTS+++ I + ++I++ ++GRDVY++G
Sbjct: 112 LPKSVKSGKITQWLMECAHEEGLRPLDLILTSAQNKWAIKELIAKIEELRQGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G+++ S PGTTL I+I G ++DTP
Sbjct: 172 TNVGKSTLINAIIQEITGDKNIITT---------SRFPGTTLDKIEI-PLNDGSYIFDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + + L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLSDKALKYISPKKEIKPKTYQLNPEQ--------------TLFLGGLAR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + T Y +L+++ AD FY K +G LTPP K+ A K
Sbjct: 268 FDYV-TGDKQGFTAYFDNNLKLHRTKLAGADAFYDKHIGSLLTPPDKKEMAAFPK----- 321
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
++ E T + +D+ SGLGWI +
Sbjct: 322 ---LVRHEFTIKEKTDLVFSGLGWIRI 345
>gi|422758292|ref|ZP_16812054.1| GTP-binding protein YqeH [Streptococcus dysgalactiae subsp.
dysgalactiae ATCC 27957]
gi|322411127|gb|EFY02035.1| GTP-binding protein YqeH [Streptococcus dysgalactiae subsp.
dysgalactiae ATCC 27957]
Length = 372
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 116/393 (29%), Positives = 182/393 (46%), Gaps = 48/393 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG +QT + + G+ KK + C RC L H + IT V
Sbjct: 6 CIGCGIQIQTKDKEKAGFTPAAAL---KKGMGTGELYCQRCFRLRHYNEITDV------- 55
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ DE L + AL+V ++DI DFNGS + + N ++LV K D+
Sbjct: 56 ----HITDDEFLRLLHEVGNSDALVVNVIDIFDFNGSIIPGLSRFISGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK V W+ E ++ L L V LTS+++ I + I + + GRDVY++G
Sbjct: 112 LPKSVKNGKVTQWLTERAHEEGLRPLDVMLTSAQNKYAIKDLIERINELRNGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G++D S PGTTL I+I G ++DTP
Sbjct: 172 TNVGKSTLINAIIQEITGDKDVITT---------SRFPGTTLDKIEI-PLDDGSFIFDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + ++L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLSPKELKIVSPKKEIKPKTYQLNPEQ--------------TLFLGGLAR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + F+ L+++ AD FY K +G LTPP GK++ L
Sbjct: 268 FDFINGERQGFTAFF-DNQLELHRTKLAGADAFYDKHVGTLLTPP-GKKELTALPKL--- 322
Query: 460 RLLEIKFEDTERPASDVAISGLGWISVEPVRRS 492
++ E T D+ SGLGWI V + S
Sbjct: 323 ----VRHEFTIDQKMDIVFSGLGWIRVNGQKDS 351
>gi|314933767|ref|ZP_07841132.1| ribosome biogenesis GTPase YqeH [Staphylococcus caprae C87]
gi|313653917|gb|EFS17674.1| ribosome biogenesis GTPase YqeH [Staphylococcus caprae C87]
Length = 366
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 127/432 (29%), Positives = 204/432 (47%), Gaps = 70/432 (16%)
Query: 96 SAVASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFK-TVLCGRCRLLSHGHMITAVG 154
S + C GCGAPLQ+ + +APGYV +H+ F+ V+C RC L + + + VG
Sbjct: 2 SELLKCIGCGAPLQSEDKNAPGYV--------PEHNMFREDVICQRCFRLKNYNEVQDVG 53
Query: 155 GNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILV 214
+ +++ L+ L + ++V +VD+ DF GSF+ I+ + G IIL
Sbjct: 54 -----------MDSEDFLNLLTGLSNKSGIVVNVVDVFDFEGSFINAIKRIVGNKKIILA 102
Query: 215 VTKVDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRD 274
K+DLLPK + V +W+ + K L V L S+ GI + I + + D
Sbjct: 103 ANKLDLLPKQINQRRVKEWLKKTARKYGLEADDVVLISADKGWGIEELMQSINQVRNNED 162
Query: 275 VYILGSANVGKSAFINALLK-KMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGG 333
VY++G+ NVGKS IN L++ +GE+D S PGTTL I I
Sbjct: 163 VYVVGTTNVGKSTLINKLIEISVGEKDVVTT---------SRFPGTTLDMIDI-PLDETT 212
Query: 334 KLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIF 393
+YDTPG+ H+ V +L + P+ ++ + + + E T+F
Sbjct: 213 FMYDTPGIIQEHQMTNYVSDIELKTIMPKKEIKQRVYQLNEEQ--------------TLF 258
Query: 394 WGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGW 453
+GGL RID + + + F+ L ++ T+KA+E ++ +LG LTPP +
Sbjct: 259 FGGLARIDYVSGGKRSLVCFFS-NDLNIHRTKTEKANELWKNQLGSLLTPPHDASQ---- 313
Query: 454 KGLDRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHV 513
D + ++ E T + DV ISGLG+I+++ + I V V
Sbjct: 314 --FDLNDVKAVRLE-TGKAKRDVMISGLGFITIDEGAKVI-----------------VRV 353
Query: 514 PKPVEVFVRNPM 525
PK V+V +RN +
Sbjct: 354 PKNVDVILRNSI 365
>gi|392330686|ref|ZP_10275301.1| GTP-binding protein YqeH [Streptococcus canis FSL Z3-227]
gi|391418365|gb|EIQ81177.1| GTP-binding protein YqeH [Streptococcus canis FSL Z3-227]
Length = 372
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 117/387 (30%), Positives = 182/387 (47%), Gaps = 48/387 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG +QT + G+ KK + + C RC L H + IT V
Sbjct: 6 CIGCGIQVQTEDKKKAGFTPAAAL---KKGLETGELYCQRCFRLRHYNDITDV------- 55
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ DE L + AL+V +VDI DFNGS + + N ++LV K D+
Sbjct: 56 ----HITDDEFLRLLHEVGDSDALVVNVVDIFDFNGSIIPGLSRFVSGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK V W+VE ++ L L V LTS+++ I + I +KGR+VY++G
Sbjct: 112 LPKSVKDGKVTQWLVERAHEEGLRPLDVMLTSAQNKYAIKELIERINTLRKGRNVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G++D S PGTTL I+I G ++DTP
Sbjct: 172 TNVGKSTLINAIIQEVTGDKDVITT---------SRFPGTTLDKIEI-PLDDGTFIFDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + A+DL ++P+ ++ +++ + + T+F GGL R
Sbjct: 222 GIIHRHQMAHYLSAKDLKVVSPKKEIKPKTYQLNPKQ--------------TLFLGGLAR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + F+ L ++ AD FY K LG LTPP K+ + K + E
Sbjct: 268 FDFISGERQGFTAFF-DNELGLHRTKLTGADTFYDKHLGGLLTPPGQKEAVDFPKLVRHE 326
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
+++ K D+ SGLGWI +
Sbjct: 327 FVIDQKM--------DLVFSGLGWIRI 345
>gi|299535723|ref|ZP_07049044.1| GTP-binding protein YqeH [Lysinibacillus fusiformis ZC1]
gi|298728923|gb|EFI69477.1| GTP-binding protein YqeH [Lysinibacillus fusiformis ZC1]
Length = 367
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 124/424 (29%), Positives = 194/424 (45%), Gaps = 67/424 (15%)
Query: 100 SCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGY 159
+C GCG +QT + A GY P + E V+C RC L + + I V
Sbjct: 6 NCIGCGTTIQTEDKTAVGYAPPSSLEKD-------VVICQRCFRLKNYNEIQPVS----- 53
Query: 160 AGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVD 219
++ D+ L+ L ++ LIVK+VDI DFNGS+L + G NP++L+ K D
Sbjct: 54 ------LTDDDFLRILNGLGTQQGLIVKIVDIFDFNGSWLPGLHRFVGKNPVLLIANKAD 107
Query: 220 LLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILG 279
LLPK V +W+ L + V L S+ G+ I + +KG++VY++G
Sbjct: 108 LLPKSVKPKKVINWLKREAKALGLQPVDVLLVSAHKGKGMAEAMEAIDEYRKGQNVYVVG 167
Query: 280 SANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS FIN ++K+ A + S PGTTL I I G LYDTP
Sbjct: 168 CTNVGKSTFINRIIKQ--------ATGEGEVITTSHFPGTTLDMIDI-PLDDGSALYDTP 218
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ HH+ A + + +L + P+ ++ + + + N G T+F G L R
Sbjct: 219 GIINHHQMAHHIDSSELKYIMPKKEIKPKVY------QQN--------AGQTLFIGALAR 264
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D ++ + T + L ++ +KAD Y++ G L PP +D+
Sbjct: 265 FDFIQG-DRSAFTIHVANDLPIHRTKLEKADALYEEHKGELLAPPTA-------DFIDQL 316
Query: 460 RLLEIKFEDTERPA-SDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVE 518
L ++ E + + A +DV SGLGWI+V+ + +A + PK V+
Sbjct: 317 PPL-VRHEFSIKEAKTDVVFSGLGWITVQ----------------HANVVVAAYAPKGVQ 359
Query: 519 VFVR 522
V +R
Sbjct: 360 VSIR 363
>gi|257425721|ref|ZP_05602145.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 55/2053]
gi|257428382|ref|ZP_05604780.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 65-1322]
gi|257431019|ref|ZP_05607399.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus
68-397]
gi|257433707|ref|ZP_05610065.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus
E1410]
gi|257436621|ref|ZP_05612665.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus M876]
gi|282911234|ref|ZP_06319036.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus WBG10049]
gi|282914403|ref|ZP_06322189.1| GTP-binding protein [Staphylococcus aureus subsp. aureus M899]
gi|282924697|ref|ZP_06332365.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus C101]
gi|293503477|ref|ZP_06667324.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 58-424]
gi|293510494|ref|ZP_06669200.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus M809]
gi|293531034|ref|ZP_06671716.1| GTP-binding protein [Staphylococcus aureus subsp. aureus M1015]
gi|384867430|ref|YP_005747626.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus TCH60]
gi|257271415|gb|EEV03561.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 55/2053]
gi|257275223|gb|EEV06710.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 65-1322]
gi|257278449|gb|EEV09085.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus
68-397]
gi|257281800|gb|EEV11937.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus
E1410]
gi|257283972|gb|EEV14095.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus M876]
gi|282313532|gb|EFB43927.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus C101]
gi|282321584|gb|EFB51909.1| GTP-binding protein [Staphylococcus aureus subsp. aureus M899]
gi|282324929|gb|EFB55239.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus WBG10049]
gi|290920302|gb|EFD97368.1| GTP-binding protein [Staphylococcus aureus subsp. aureus M1015]
gi|291095143|gb|EFE25408.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 58-424]
gi|291466858|gb|EFF09378.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus M809]
gi|312437935|gb|ADQ77006.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus TCH60]
Length = 366
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 130/432 (30%), Positives = 208/432 (48%), Gaps = 70/432 (16%)
Query: 96 SAVASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQF-KTVLCGRCRLLSHGHMITAVG 154
S + C GCGAPLQ+ + + PG+V +H+ F V+C RC L + + + VG
Sbjct: 2 SDILKCIGCGAPLQSEDKNKPGFV--------PEHNMFGDDVICRRCFRLKNYNEVQDVG 53
Query: 155 GNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILV 214
+ +++ + LS L +K ++V +VD+ DF GSF+ ++ + G IIL
Sbjct: 54 -----------LESEDFLKLLSGLADKKGIVVNVVDVFDFEGSFINAVKRIVGNKKIILA 102
Query: 215 VTKVDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRD 274
K+DLLPK + V +W+ K L V L S++ GI + S I ++ D
Sbjct: 103 ANKLDLLPKQINKRRVKEWLKRTARKYGLEADDVVLISAEKGWGIDDLLSSIANIRENED 162
Query: 275 VYILGSANVGKSAFINALLK-KMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGG 333
VYI+G+ NVGKS IN L++ +GE+D S PGTTL I I
Sbjct: 163 VYIVGTTNVGKSTLINKLIEASVGEKDVVTT---------SRFPGTTLDMIDI-PLDETS 212
Query: 334 KLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIF 393
+YDTPG+ H+ +V ++L + P+ ++ + + + NE + T+F
Sbjct: 213 FMYDTPGIIQDHQMTHLVSEKELKIIMPKKEIKQRVYQL-------NEAQ-------TLF 258
Query: 394 WGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGW 453
+GGL RID + + F+ L ++ T+KA++ ++ +LG LTPP Q
Sbjct: 259 FGGLARIDYVSGGKRPLICFFS-NDLNIHRTKTEKANDLWRNQLGDLLTPPGNPQ----- 312
Query: 454 KGLDRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHV 513
D + ++ E T + DV ISGLG+I++ P + I V V
Sbjct: 313 -NFDLNEVKAVRLE-TGKEKRDVMISGLGFITIGPGAKVI-----------------VRV 353
Query: 514 PKPVEVFVRNPM 525
PK V+V +RN +
Sbjct: 354 PKNVDVVLRNSI 365
>gi|383479447|ref|YP_005388341.1| GTP-binding protein [Streptococcus pyogenes MGAS15252]
gi|383493371|ref|YP_005411047.1| GTP-binding protein [Streptococcus pyogenes MGAS1882]
gi|378927437|gb|AFC65643.1| GTP-binding protein [Streptococcus pyogenes MGAS15252]
gi|378929099|gb|AFC67516.1| GTP-binding protein [Streptococcus pyogenes MGAS1882]
Length = 372
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 116/393 (29%), Positives = 183/393 (46%), Gaps = 48/393 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG +QT + + G+ KK + + C RC L H + IT V
Sbjct: 6 CIGCGIQIQTEDKEKAGFTPAAAL---KKGMETGELYCQRCFRLRHYNEITDV------- 55
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ DE L + AL+V ++DI DFNGS + + N ++LV K D+
Sbjct: 56 ----HITDDEFLRLLHEVGDSDALVVNVIDIFDFNGSIIPGLSRFISGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK V W+ E ++ L L V LTS+++ I + I + + GRDVY++G
Sbjct: 112 LPKSVKDGKVTQWLTERAHEEGLRPLDVMLTSAQNKYAIKYLIERINELRNGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G +D S PGTTL I+I G ++DTP
Sbjct: 172 TNVGKSTLINAIIQEITGNKDVITT---------SRFPGTTLDKIEI-PLDDGTFIFDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + ++L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLSPKELKIVSPKKEIKPKTYQLNPEQ--------------TLFLGGLSR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + F+ L+++ AD FY K +G LTPP GK++ + L
Sbjct: 268 FDFINGERQGFTAFF-DNQLELHRTKLAGADAFYDKHVGTLLTPP-GKKELTAFPKL--- 322
Query: 460 RLLEIKFEDTERPASDVAISGLGWISVEPVRRS 492
++ E T D+ SGLGWI V + S
Sbjct: 323 ----VRHEFTIDQKMDIVFSGLGWIRVNGQKDS 351
>gi|417797344|ref|ZP_12444540.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21305]
gi|334266836|gb|EGL85306.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21305]
Length = 366
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 130/432 (30%), Positives = 211/432 (48%), Gaps = 70/432 (16%)
Query: 96 SAVASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKT-VLCGRCRLLSHGHMITAVG 154
S + C GCGAPLQ+ + + PG+V +H+ F+ V+C RC L + + + VG
Sbjct: 2 SDILKCIGCGAPLQSEDKNKPGFV--------PEHNMFRDDVICRRCFRLKNYNEVQDVG 53
Query: 155 GNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILV 214
+ +++ + LS L +K ++V +VD+ DF GSF+ ++ + G IIL
Sbjct: 54 -----------LESEDFLKLLSGLADKKGIVVNVVDVFDFEGSFINAVKRIVGNKKIILA 102
Query: 215 VTKVDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRD 274
K+DLLPK + V +W+ K L V L S++ GI + S I ++ D
Sbjct: 103 ANKLDLLPKQINKRRVKEWLKRTARKYGLEADDVVLISAEKGWGIDDLLSSIANIRENED 162
Query: 275 VYILGSANVGKSAFINALLK-KMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGG 333
VYI+G+ NVGKS IN L++ +GE+D S PGTTL I I
Sbjct: 163 VYIVGTTNVGKSTLINKLIEASVGEKDVVTT---------SRFPGTTLDMIDI-PLDETS 212
Query: 334 KLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIF 393
+YDTPG+ H+ +V ++L + P+ ++ + + + NE + T+F
Sbjct: 213 FMYDTPGIIQDHQMTHLVSEKELKIIMPKKEIKQRVYQL-------NEAQ-------TLF 258
Query: 394 WGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGW 453
+GGL RID + + F+ L ++ T+KA++ ++ +LG LTPP Q +
Sbjct: 259 FGGLARIDYVSGGKRPLVCFFS-NDLNIHRTKTEKANDLWRNQLGDLLTPPGNPQNFD-- 315
Query: 454 KGLDRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHV 513
L+ + + +K T + DV ISGLG+I++ P + I V V
Sbjct: 316 --LNEVKAVRLK---TGKEKRDVMISGLGFITIGPGAKVI-----------------VRV 353
Query: 514 PKPVEVFVRNPM 525
PK V+V +RN +
Sbjct: 354 PKNVDVVLRNSI 365
>gi|225867895|ref|YP_002743843.1| GTP-binding protein [Streptococcus equi subsp. zooepidemicus]
gi|225701171|emb|CAW98072.1| GTP-binding protein [Streptococcus equi subsp. zooepidemicus]
Length = 372
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 115/387 (29%), Positives = 183/387 (47%), Gaps = 48/387 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG +QT+ G+ K + + + C RC L H + IT V
Sbjct: 6 CIGCGIQIQTTRKQEAGFTPAAAL---VKGIEAREIYCQRCFRLRHYNDITDV------- 55
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ +E L + AL+V ++DI DFNGS + + N ++LV K D+
Sbjct: 56 ----HITDEEFLRLLHEVGDSDALVVNVIDIFDFNGSVIPGLSRFVAGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + V W+ E ++ L L V LTS+++ I + I + ++GRDVY++G
Sbjct: 112 LPKSVKDSKVTQWLTERAHEEGLRPLDVLLTSAQNKYAIKELIERIDQLRQGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G++D S PGTTL I+I G ++DTP
Sbjct: 172 TNVGKSTLINAIIQEITGDKDVITT---------SRFPGTTLDKIEI-PLDDGSFIFDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + A++L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLSAKNLKFISPKKEIKPKTYQLNPEQ--------------TLFLGGLAR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + T Y L ++ + AD FY K+ G LTPP K+ + + + E
Sbjct: 268 FDFISG-ERQGFTAYFDNQLLLHRTKLEGADAFYDKQAGQLLTPPDKKELDDFPRLVRHE 326
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
LL+ K D+ SGLGWI V
Sbjct: 327 FLLDQKV--------DIVFSGLGWIRV 345
>gi|326803787|ref|YP_004321605.1| ribosome biogenesis GTPase YqeH [Aerococcus urinae
ACS-120-V-Col10a]
gi|326650122|gb|AEA00305.1| ribosome biogenesis GTPase YqeH [Aerococcus urinae
ACS-120-V-Col10a]
Length = 370
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 123/429 (28%), Positives = 194/429 (45%), Gaps = 65/429 (15%)
Query: 98 VASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNG 157
V C GCGA LQT + GY Y+ K + + C RC L H + + V
Sbjct: 5 VLYCIGCGASLQTDQPKERGYTPKSAYD---KGVESGDLYCQRCFKLRHYNQLEKV---- 57
Query: 158 GYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTK 217
Q A E R+ L + + ALIV ++DI D + + + L G N I+ V K
Sbjct: 58 ------QMTPA-EFRQILHEISEDDALIVNVIDIFDVQSTIIPALERLVGNNDIVFVANK 110
Query: 218 VDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYI 277
VDLLP + + W+ + + +V LTS+ I + S I + +KGR+VYI
Sbjct: 111 VDLLPSDVKSSKIEAWLRKYLKDQGFKARNVFLTSAVKNKAIDDLFSFIDQHRKGRNVYI 170
Query: 278 LGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYD 337
+G +NVGKS IN++L+ G D +Q PGTTL I+I F L D
Sbjct: 171 VGVSNVGKSTLINSMLRAQGFSDSVITTSQ--------FPGTTLDLIKI-PFDEASDLID 221
Query: 338 TPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLN-GFTIFWGG 396
TPG+ + ++ + + + PQ R++ ++F LN G ++F GG
Sbjct: 222 TPGILKDSQMTTLLDYKSIEQILPQKRIKPRTFQ---------------LNPGQSLFLGG 266
Query: 397 LVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGL 456
+ R D L+ + +T Y + ++ T+ +DEF K G LTPP + E + L
Sbjct: 267 MARFDYLEGAKQG-VTVYLSNQVDIHRRKTEGSDEFLAKHQGDLLTPP-SASEVERFPDL 324
Query: 457 DRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKP 516
+ T + D+ I+GLGW+S++ + +A++ PK
Sbjct: 325 VSQVY-------TIKEPCDLVIAGLGWLSIKKPGK-----------------VAIYAPKA 360
Query: 517 VEVFVRNPM 525
V++F R P+
Sbjct: 361 VDIFQRKPL 369
>gi|365925269|ref|ZP_09448032.1| GTPase YqeH [Lactobacillus mali KCTC 3596 = DSM 20444]
Length = 372
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 117/390 (30%), Positives = 187/390 (47%), Gaps = 54/390 (13%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG+ +Q+++ D GYV KK + K + C RC L H + ++ V
Sbjct: 10 CIGCGSLIQSNDPDGLGYVPASAL---KKQVETKELYCKRCFRLRHYNEVSDVN------ 60
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ + L+ + ALIV ++DI DF+GS + I+ G NPI++V K DL
Sbjct: 61 -----LTDDDFLKILTQIGDTDALIVNVIDIFDFSGSIIPGIQRYVGKNPILMVGNKEDL 115
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + DW+ ++ L V L S+ GI + S I+K ++GRDVY++G
Sbjct: 116 LPKSLKRTKLKDWIRQSANLVGLRPADVALVSAGKNHGIATLLSLIEKYREGRDVYVVGV 175
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQI----DAFLGGGKLY 336
NVGKS IN ++K+ + S PGTTL I+I + F L
Sbjct: 176 TNVGKSTLINQIIKQQTGINELITT--------SRFPGTTLDKIEIPLDDEHF-----LI 222
Query: 337 DTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGG 396
DTPG+ H+ A + ++L +PQ ++ + + + + G T+F GG
Sbjct: 223 DTPGIIHQHQMAHFLSGKELNVASPQKEIKPRVYQLNA--------------GQTLFLGG 268
Query: 397 LVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGL 456
L R D + + + Y +L ++ + AD Y+K +G L PP E L
Sbjct: 269 LARFDYITG-EKDGIVVYTDNNLMLHRTKLENADTLYEKHVGELLQPP----SEETLTKL 323
Query: 457 DRERLLEIKFEDTERPASDVAISGLGWISV 486
+L+ +F+ ++ SD+ SGLGWI+V
Sbjct: 324 --PKLVRFEFKTVQK--SDLVFSGLGWITV 349
>gi|328868001|gb|EGG16382.1| hypothetical protein DFA_09413 [Dictyostelium fasciculatum]
Length = 704
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 118/454 (25%), Positives = 200/454 (44%), Gaps = 100/454 (22%)
Query: 133 FKTVLCGRCRLLSHGHMITAVGGNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIV 192
K +C RC +L + + + + +E + KL+++R +++K+VDI+
Sbjct: 279 LKKEVCQRCHMLKNYGKVVPIK-----------IPVNEFKSKLANIRNMNCVVIKVVDIM 327
Query: 193 DFNGSFLARIRDLAGANPIILVVTKVDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTS 252
DF+G+F+ R + G NP+I+V K+D+LP + + DW+ + + V L S
Sbjct: 328 DFSGTFIEDFRHIVGNNPVIVVCNKMDVLPADIHKHRIEDWIRRECKARGMVAAHVKLLS 387
Query: 253 SKSLAGIVGVASEIQKEKKGRDVYILGSANVGKSAFINALLKKMGER------------- 299
S S GI E++K ++GRDV+++G +NVGKS F+NAL+ + +
Sbjct: 388 SASKEGITDFIVELEKIRRGRDVFVVGCSNVGKSTFLNALVDEYSNKVEFGDQQEEENGG 447
Query: 300 -------------------DPAAAMAQKYRPIQSAV-----PGTTLGPIQIDAFLGGGKL 335
P +K + + S V PGTTL I + L
Sbjct: 448 KKKKNGKQEVKHKEAEPQETPEKEAERKRKLLASRVTTSIFPGTTLNVISV-PLWNNSTL 506
Query: 336 YDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWG 395
+DTPGV + ++ E+L A+ P R++ H + G ++F
Sbjct: 507 FDTPGVDNPSQIIKLLKPEELKAVIPTKRIKPSLV--------------HMIEGKSLFLA 552
Query: 396 GLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGW-- 453
GL RID L T Y +L +++ TDKAD +Q++ G L PPIG +
Sbjct: 553 GLARIDYSGGL--ATFTVYTNNNLPLHLCRTDKADALFQRQRGKMLCPPIGLENININNN 610
Query: 454 ------------KGLDRERLLEI----KFE------DTERPASDVAISGLGWISVEPVRR 491
GL + +++ KF D + +D+ ISGLGWI+++P
Sbjct: 611 NNNNYIESDIIGNGLVFDEKMDLSQLTKFSITPEQVDFKHTHTDLVISGLGWIAIKP--- 667
Query: 492 SIRNSDINLESTSGELHLAVHVPKPVEVFVRNPM 525
L + L+++ PK ++V +R P+
Sbjct: 668 --------LSKQAKPFKLSIYTPKFIDVSLRAPL 693
>gi|282919372|ref|ZP_06327107.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus C427]
gi|417887990|ref|ZP_12532109.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21195]
gi|282317182|gb|EFB47556.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus C427]
gi|341857019|gb|EGS97846.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21195]
Length = 366
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 130/432 (30%), Positives = 208/432 (48%), Gaps = 70/432 (16%)
Query: 96 SAVASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQF-KTVLCGRCRLLSHGHMITAVG 154
S + C GCGAPLQ+ + + PG+V +H+ F V+C RC L + + + VG
Sbjct: 2 SDILKCIGCGAPLQSEDKNKPGFV--------PEHNMFGDDVICRRCFRLKNYNEVQDVG 53
Query: 155 GNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILV 214
+ +++ + LS L +K ++V +VD+ DF GSF+ ++ + G IIL
Sbjct: 54 -----------LESEDFLKLLSGLADKKGIVVNVVDVFDFEGSFINAVKRIVGNKKIILA 102
Query: 215 VTKVDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRD 274
K+DLLPK + V +W+ K L V L S++ GI + S I ++ D
Sbjct: 103 ANKLDLLPKQINKRRVKEWLKRTARKYGLEADDVVLISAEKGWGIDDLLSSIANIRENED 162
Query: 275 VYILGSANVGKSAFINALLK-KMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGG 333
VYI+G+ NVGKS IN L++ +GE+D S PGTTL I I
Sbjct: 163 VYIVGTTNVGKSTLINKLIEASVGEKDVVTT---------SRFPGTTLDMIDI-PLDETS 212
Query: 334 KLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIF 393
+YDTPG+ H+ +V ++L + P+ ++ + + + NE + T+F
Sbjct: 213 FMYDTPGIIQDHQMTHLVSEKELKIIMPKKEIKQRVYQL-------NEAQ-------TLF 258
Query: 394 WGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGW 453
+GGL RID + + F+ L ++ T+KA++ ++ +LG LTPP Q
Sbjct: 259 FGGLARIDYVSGGKRPLICFFS-NDLNIHRTKTEKANDLWRNQLGDLLTPPGNLQ----- 312
Query: 454 KGLDRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHV 513
D + ++ E T + DV ISGLG+I++ P + I V V
Sbjct: 313 -NFDLNEVKAVRLE-TGKEKRDVMISGLGFITIGPGAKVI-----------------VRV 353
Query: 514 PKPVEVFVRNPM 525
PK V+V +RN +
Sbjct: 354 PKNVDVVLRNSI 365
>gi|422415992|ref|ZP_16492949.1| ribosome biogenesis GTPase YqeH [Listeria innocua FSL J1-023]
gi|313623708|gb|EFR93856.1| ribosome biogenesis GTPase YqeH [Listeria innocua FSL J1-023]
Length = 366
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 116/386 (30%), Positives = 181/386 (46%), Gaps = 50/386 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT + D GY K + V+C RC L H + I V
Sbjct: 7 CIGCGAIIQTEDPDKIGYA-------PKSSLNNEQVICKRCFRLKHYNEIQDVA------ 53
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ L+ + ++ALIV +VDI DF+GS+L + AG+NP++LV K D+
Sbjct: 54 -----LTDDDFLRILNQISSKQALIVYVVDIFDFDGSWLPGLPRFAGSNPVLLVGNKEDV 108
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + + ++ L V L S++ G + +I++ + G+DVY++G
Sbjct: 109 LPKSLKRDKLTRXXXTRAKEQGLAATDVVLVSAEKGHGFDTLLEKIEELRNGQDVYVVGC 168
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS IN ++K+ + +Q PGTTL I+I G L DTPG
Sbjct: 169 TNVGKSTLINRIIKQASGENNVITTSQ--------FPGTTLDKIEI-PLADGNVLVDTPG 219
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ HH+ A + L A+ P+ ++ F + E T+F G L R+
Sbjct: 220 IINHHQMAHFIDTTTLKAITPKKEVKPAVFQLNEEQ--------------TLFLGALARL 265
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D + L Y +L ++ +KAD Y+K+ G L PP EG K L +
Sbjct: 266 DYVSG-GRKSLVVYVSNNLPIHRTKLEKADALYEKQAGFVLQPP----TEEGMKTL--PK 318
Query: 461 LLEIKFEDTERPASDVAISGLGWISV 486
L+ F T + +D+ SGLGW+++
Sbjct: 319 LVPYTF--TVKDKADIVFSGLGWVTI 342
>gi|336053764|ref|YP_004562051.1| GTP-binding protein [Lactobacillus kefiranofaciens ZW3]
gi|333957141|gb|AEG39949.1| GTP-binding protein [Lactobacillus kefiranofaciens ZW3]
Length = 369
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 115/386 (29%), Positives = 177/386 (45%), Gaps = 46/386 (11%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA LQ+ + GY+ P + K + ++ V C RC L H + I V N
Sbjct: 7 CIGCGAVLQSDDPKKAGYL-PKSALDKARTNENTDVYCQRCFRLRHYNEIMPVDLNN--- 62
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
D+ L+ L +KAL+V +VD+ DF+ S L+ ++ G N ILV K DL
Sbjct: 63 --------DDFLALLNSLAEKKALVVNVVDLFDFSNSLLSSLKRFVGNNDFILVGNKFDL 114
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
PK + + + DW+ + + L + L S++ + + I ++ + +DVY +G+
Sbjct: 115 FPKNSKQSKIKDWIRQEANRMGLYPKKIFLVSARKKLNLDTLIEYINQQSQDKDVYFVGT 174
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS INA++ MG+ S PGTTL I+I G L DTPG
Sbjct: 175 TNVGKSTLINAIVDMMGDIQDLIT--------TSRFPGTTLDRIEI-PLENGHFLIDTPG 225
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ + ++A+DL ++P+ L+ ++ + L G T+F GL RI
Sbjct: 226 IMTESQLTTHLNAKDLELISPKKPLKPATYQL--------------LPGNTLFLAGLGRI 271
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D LK T T Y + + V+ T AD FY+K G L PP + KG
Sbjct: 272 DYLKG-ESTSFTVYVARGMYVHRTKTINADAFYEKHRGELLAPPASDDQLPALKGQ---- 326
Query: 461 LLEIKFEDTERPASDVAISGLGWISV 486
E SD+ G+G+++V
Sbjct: 327 ------EFNTNYKSDLLFGGIGFVTV 346
>gi|424739106|ref|ZP_18167528.1| GTP-binding protein YqeH [Lysinibacillus fusiformis ZB2]
gi|422946971|gb|EKU41373.1| GTP-binding protein YqeH [Lysinibacillus fusiformis ZB2]
Length = 367
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 124/424 (29%), Positives = 193/424 (45%), Gaps = 67/424 (15%)
Query: 100 SCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGY 159
+C GCG +QT + A GY P + E V+C RC L + + I V
Sbjct: 6 NCIGCGTTIQTEDKTAVGYAPPSSLEKD-------VVICQRCFRLKNYNEIQPVS----- 53
Query: 160 AGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVD 219
++ D+ L+ L ++ LIVK+VDI DFNGS+L + G NP++L+ K D
Sbjct: 54 ------LTDDDFLRILNGLGTQQGLIVKIVDIFDFNGSWLPGLHRFVGKNPVLLIANKAD 107
Query: 220 LLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILG 279
LLPK V +W+ L + V L S+ G+ I +KG++VY++G
Sbjct: 108 LLPKSVKPKKVINWLKREAKALGLQPVDVLLVSAHKGKGMAEAMEAIDAYRKGQNVYVVG 167
Query: 280 SANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS FIN ++K+ A + S PGTTL I I G LYDTP
Sbjct: 168 CTNVGKSTFINRIIKQ--------ATGEGEVITTSHFPGTTLDMIDI-PLDDGSALYDTP 218
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ HH+ A + + +L + P+ ++ + + + N G T+F G L R
Sbjct: 219 GIINHHQMAHHIDSSELKYIMPKKEIKPKVY------QQN--------AGQTLFIGALAR 264
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D ++ + T + L ++ +KAD Y++ G L PP +D+
Sbjct: 265 FDFIQG-DRSAFTIHVANDLPIHRTKLEKADALYEEHKGELLAPPTA-------DFIDQL 316
Query: 460 RLLEIKFEDTERPA-SDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVE 518
L ++ E + + A +DV SGLGWI+V+ + +A + PK V+
Sbjct: 317 PPL-VRHEFSIKEAKTDVVFSGLGWITVQ----------------HANVVVAAYAPKGVQ 359
Query: 519 VFVR 522
V +R
Sbjct: 360 VSIR 363
>gi|384550424|ref|YP_005739676.1| GTPase family protein [Staphylococcus aureus subsp. aureus JKD6159]
gi|302333273|gb|ADL23466.1| GTPase family protein [Staphylococcus aureus subsp. aureus JKD6159]
Length = 366
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 129/432 (29%), Positives = 208/432 (48%), Gaps = 70/432 (16%)
Query: 96 SAVASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKT-VLCGRCRLLSHGHMITAVG 154
S + C GCGAPLQ+ + + PG+V +H+ F+ V+C RC L + + + VG
Sbjct: 2 SDILKCIGCGAPLQSEDKNKPGFV--------PEHNMFRDDVICRRCFRLKNYNEVQDVG 53
Query: 155 GNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILV 214
+ +++ + LS L +K ++V +VD+ DF GSF+ ++ + G IIL
Sbjct: 54 -----------LESEDFLKLLSGLADKKGIVVNVVDVFDFEGSFINAVKRIVGNKKIILA 102
Query: 215 VTKVDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRD 274
K+DLLPK + V +W+ K L V L S++ GI + S I ++ D
Sbjct: 103 ANKLDLLPKQINKRRVKEWLKRTARKYGLEAEDVVLISAEKGWGIDDLLSSIANIRENED 162
Query: 275 VYILGSANVGKSAFINALLK-KMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGG 333
VYI+G+ NVGKS IN L++ +GE+D S PGTTL I I
Sbjct: 163 VYIVGTTNVGKSTLINKLIEASVGEKDVVTT---------SRFPGTTLDMIDI-PLDETS 212
Query: 334 KLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIF 393
+YDTPG+ H+ +V ++L + P+ ++ + + + NE + T+F
Sbjct: 213 FMYDTPGIIQDHQMTHLVSEKELKIIMPKKEIKQRVYQL-------NEAQ-------TLF 258
Query: 394 WGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGW 453
+GGL RID + + F+ L ++ T+ A++ ++ +LG LTPP Q
Sbjct: 259 FGGLARIDYVSGGKRPLVCFFS-NDLNIHRTKTENANDLWRNQLGDLLTPPGNPQ----- 312
Query: 454 KGLDRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHV 513
D + ++ E T + DV ISGLG+I++ P + I V V
Sbjct: 313 -NFDLNEVKAVRLE-TGKEKRDVMISGLGFITIGPGAKVI-----------------VRV 353
Query: 514 PKPVEVFVRNPM 525
PK V+V +RN +
Sbjct: 354 PKNVDVVLRNSI 365
>gi|417897023|ref|ZP_12540966.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21235]
gi|341840289|gb|EGS81809.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21235]
Length = 366
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 129/432 (29%), Positives = 209/432 (48%), Gaps = 70/432 (16%)
Query: 96 SAVASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKT-VLCGRCRLLSHGHMITAVG 154
S + C GCGAPLQ+ + + PG+V +H+ F+ V+C RC L + + + VG
Sbjct: 2 SDILKCIGCGAPLQSEDKNKPGFV--------PEHNMFRDDVICRRCFRLKNYNEVQDVG 53
Query: 155 GNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILV 214
+ +++ + LS L +K ++V +VD+ DF GSF+ ++ + G IIL
Sbjct: 54 -----------LESEDFLKLLSGLADKKGIVVNVVDVFDFEGSFINAVKRIVGNKKIILA 102
Query: 215 VTKVDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRD 274
K+DLLPK + V +W+ K L V L S++ GI + S I ++ D
Sbjct: 103 ANKLDLLPKQINKRRVKEWLKRTARKYGLEADDVVLISAEKGWGIDDLLSSIANIRENED 162
Query: 275 VYILGSANVGKSAFINALLK-KMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGG 333
VYI+G+ NVGKS IN L++ +GE+D S PGTTL I I
Sbjct: 163 VYIVGTTNVGKSTLINKLIEASVGEKDVVTT---------SRFPGTTLDMIDI-PLDETS 212
Query: 334 KLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIF 393
+YDTPG+ H+ +V ++L + P+ ++ + + + NE + T+F
Sbjct: 213 FMYDTPGIIQDHQMTHLVSEKELKIIMPKKEIKQRVYQL-------NEAQ-------TLF 258
Query: 394 WGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGW 453
+GGL RID + + F+ L ++ ++KA++ ++ +LG LTPP Q
Sbjct: 259 FGGLARIDYVSGGKRPLVCFFS-NDLNIHRTKSEKANDLWRNQLGDLLTPPGNPQ----- 312
Query: 454 KGLDRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHV 513
D + ++ E T + DV ISGLG+I++ P + I V V
Sbjct: 313 -NFDLNEVKAVRLE-TGKEKRDVMISGLGFITIGPGAKVI-----------------VRV 353
Query: 514 PKPVEVFVRNPM 525
PK V+V +RN +
Sbjct: 354 PKNVDVVLRNSI 365
>gi|24380165|ref|NP_722120.1| GTPase YqeH [Streptococcus mutans UA159]
gi|449866835|ref|ZP_21779649.1| GTP-binding protein YqeH [Streptococcus mutans U2B]
gi|449869935|ref|ZP_21780374.1| GTP-binding protein YqeH [Streptococcus mutans 8ID3]
gi|449987024|ref|ZP_21820328.1| GTP-binding protein YqeH [Streptococcus mutans NFSM2]
gi|450081504|ref|ZP_21851769.1| GTP-binding protein YqeH [Streptococcus mutans N66]
gi|24378167|gb|AAN59426.1|AE015007_13 putative GTP-binding protein [Streptococcus mutans UA159]
gi|449157405|gb|EMB60847.1| GTP-binding protein YqeH [Streptococcus mutans 8ID3]
gi|449176868|gb|EMB79194.1| GTP-binding protein YqeH [Streptococcus mutans NFSM2]
gi|449215208|gb|EMC15419.1| GTP-binding protein YqeH [Streptococcus mutans N66]
gi|449263590|gb|EMC60960.1| GTP-binding protein YqeH [Streptococcus mutans U2B]
Length = 368
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 111/387 (28%), Positives = 190/387 (49%), Gaps = 48/387 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT+ + GY E K + + C RC L H + IT V
Sbjct: 6 CIGCGAQIQTTAKEQAGYTPKSALE---KGLESGKIYCQRCFRLRHYNEITDV------- 55
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
+S D+ + L + + L+V ++DI DFNGS + ++ ++ ++LV K D+
Sbjct: 56 ----HISDDDFLKLLHEVGDSRTLVVNVIDIFDFNGSVIPGLQRFISSSDLLLVGNKADI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W++E ++ L L + L S+++ I + ++I++ ++GRDVY++G
Sbjct: 112 LPKSVKSGKITQWLMERAHEEGLRPLDLILISAQNKWAIKELIAKIEELRQGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G+++ S PGTTL I+I G ++DTP
Sbjct: 172 TNVGKSTLINAIIQEITGDKNIITT---------SRFPGTTLNKIEI-PLNDGSYIFDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + + L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLSDKALKYISPKKEIKPKTYQLNPEQ--------------TLFLGGLAR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + T Y +L+++ AD FY K +G LTPP K+ A K
Sbjct: 268 FDYV-TGDKQGFTAYFDNNLKLHRTKLAGADAFYDKHIGSLLTPPDKKEMAAFPK----- 321
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
++ E T + +D+ SGLGWI +
Sbjct: 322 ---LVRHEFTIKEKTDLVFSGLGWIRI 345
>gi|418645090|ref|ZP_13207218.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus IS-55]
gi|375023923|gb|EHS17368.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus IS-55]
Length = 366
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 129/432 (29%), Positives = 207/432 (47%), Gaps = 70/432 (16%)
Query: 96 SAVASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKT-VLCGRCRLLSHGHMITAVG 154
S + C GCGAPLQ+ + + PG+V +H+ F+ V+C RC L + + + VG
Sbjct: 2 SDILKCIGCGAPLQSEDKNKPGFV--------PEHNMFRDDVICRRCFRLKNYNEVQDVG 53
Query: 155 GNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILV 214
+ +++ + LS L +K ++V +VD+ DF GSF+ ++ + G IIL
Sbjct: 54 -----------LESEDFLKLLSGLADKKGIVVNVVDVFDFEGSFINAVKRIVGNKKIILA 102
Query: 215 VTKVDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRD 274
K+DLLPK + V +W+ K L V L S++ GI + S I + D
Sbjct: 103 ANKLDLLPKQINKRRVKEWLKRTARKYGLEADDVVLISAEKGWGIDDLLSSIANIRDNED 162
Query: 275 VYILGSANVGKSAFINALLK-KMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGG 333
VYI+G+ NVGKS IN L++ +GE+D S PGTTL I I
Sbjct: 163 VYIVGTTNVGKSTLINKLIEASVGEKDVVTT---------SRFPGTTLDMIDI-PLDESS 212
Query: 334 KLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIF 393
+YDTPG+ H+ +V ++L + P+ ++ + + + NE + T+F
Sbjct: 213 FMYDTPGIIQDHQMTHLVSEKELKIIMPKKEIKQRVYQL-------NEAQ-------TLF 258
Query: 394 WGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGW 453
+GGL RID + + F+ L ++ +KA++ ++ +LG LTPP Q
Sbjct: 259 FGGLARIDYVSGGKRPLVCFFS-NDLNIHRTKMEKANDLWRNQLGDLLTPPGNPQ----- 312
Query: 454 KGLDRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHV 513
D + ++ E T + DV ISGLG+I++ P + I V V
Sbjct: 313 -NFDLNEIKAVRLE-TGKEKRDVMISGLGFITIGPGAKVI-----------------VRV 353
Query: 514 PKPVEVFVRNPM 525
PK V+V +RN +
Sbjct: 354 PKNVDVVLRNSI 365
>gi|239637592|ref|ZP_04678564.1| ribosome biogenesis GTPase YqeH [Staphylococcus warneri L37603]
gi|239596810|gb|EEQ79335.1| ribosome biogenesis GTPase YqeH [Staphylococcus warneri L37603]
Length = 366
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 129/427 (30%), Positives = 205/427 (48%), Gaps = 70/427 (16%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFK-TVLCGRCRLLSHGHMITAVGGNGGY 159
C GCGAPLQ+ + +APGYV +H+ F+ V+C RC L + + + VG
Sbjct: 7 CIGCGAPLQSEDKNAPGYV--------PEHNLFREDVICKRCFRLKNYNEVQDVG----- 53
Query: 160 AGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVD 219
+ +++ L+ L + ++V +VD+ DF GSF+ I+ + G IILV K+D
Sbjct: 54 ------MDSEDFLNLLTGLSDKSGIVVNVVDVFDFEGSFINAIKRIVGNKKIILVANKMD 107
Query: 220 LLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILG 279
LLPK + V +W+ A K L V L S++ GI + I K + DVYI+G
Sbjct: 108 LLPKQINHRRVKEWLKRAAKKYGLEAEDVVLISAEKGQGIEDLLDSINKYRDQEDVYIVG 167
Query: 280 SANVGKSAFINALLK-KMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDT 338
+ NVGKS IN L++ +GE+D S PGTTL I I ++DT
Sbjct: 168 TTNVGKSTLINKLIELSVGEKDVVTT---------SRFPGTTLDMIDI-PLDEKSFMFDT 217
Query: 339 PGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLV 398
PG+ H+ V ++L + P+ ++ + + + NE G T+F+GGL
Sbjct: 218 PGIIQSHQMTHFVTEKELKLVMPKKEIKQRVYQL-------NE-------GQTLFFGGLA 263
Query: 399 RIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDR 458
RID + + F+ L ++ T+KA+E ++ +G LTPP + +
Sbjct: 264 RIDYVSGGKRPLVCFFS-NELNIHRTKTEKANELWKNHIGDLLTPPHDPSQ------FNM 316
Query: 459 ERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVE 518
+ ++ E T + DV ISGLG+I+++ + I V VPK V+
Sbjct: 317 SEMKAVRLE-TGKEKRDVMISGLGFITIDSGAKVI-----------------VRVPKNVD 358
Query: 519 VFVRNPM 525
V +RN +
Sbjct: 359 VILRNSI 365
>gi|126653886|ref|ZP_01725733.1| YqeH [Bacillus sp. B14905]
gi|126589611|gb|EAZ83750.1| YqeH [Bacillus sp. B14905]
Length = 367
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 125/423 (29%), Positives = 192/423 (45%), Gaps = 65/423 (15%)
Query: 100 SCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGY 159
+C GCG +QT + A GY P + E V+C RC L + + I V
Sbjct: 6 NCIGCGTTIQTEDKTAVGYAPPSSLEKD-------AVICQRCFRLKNYNEIQPVS----- 53
Query: 160 AGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVD 219
++ D+ L+ L ++ LIVK+VDI DFNGS+L + G NP++L+ K D
Sbjct: 54 ------LTDDDFLRILNGLGTQQGLIVKIVDIFDFNGSWLPGLHRFVGKNPVLLIANKAD 107
Query: 220 LLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILG 279
LLPK V +W+ L + V L S+ G+ I + ++G++VY++G
Sbjct: 108 LLPKSVKPKKVINWLKREAKALGLQPVDVLLVSAHKGKGMAEAMEAIDEYRQGQNVYVVG 167
Query: 280 SANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS FIN ++K+ A + S PGTTL I+I G LYDTP
Sbjct: 168 CTNVGKSTFINRIIKQ--------ATGEGEVITTSHFPGTTLDMIEI-PLDDGSALYDTP 218
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ HH+ A + + +L + P+ ++ + + + N G T+F G L R
Sbjct: 219 GIINHHQMAHHIDSSELKYIMPKKEIKPKVY------QQN--------AGQTLFIGALAR 264
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D ++ + T + L ++ +KAD Y + G L PP AE L
Sbjct: 265 FDFIQG-DRSAFTIHVANDLPIHRTKLEKADMLYAEHKGELLAPP----TAEFIDQL--P 317
Query: 460 RLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVEV 519
L+ +F E +DV SGLGWI+V+ + +A + PK V+V
Sbjct: 318 PLVRHEFSIKEA-KTDVVFSGLGWITVQ----------------HANVVVAAYAPKGVQV 360
Query: 520 FVR 522
+R
Sbjct: 361 SIR 363
>gi|387143202|ref|YP_005731595.1| putative GTPase [Staphylococcus aureus subsp. aureus TW20]
gi|418276913|ref|ZP_12891667.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21178]
gi|418955584|ref|ZP_13507521.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus IS-189]
gi|269941085|emb|CBI49470.1| putative GTPase [Staphylococcus aureus subsp. aureus TW20]
gi|365173896|gb|EHM64325.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21178]
gi|375370670|gb|EHS74468.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus IS-189]
Length = 366
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 129/432 (29%), Positives = 208/432 (48%), Gaps = 70/432 (16%)
Query: 96 SAVASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKT-VLCGRCRLLSHGHMITAVG 154
S + C GCGAPLQ+ + + PG+V +H+ F+ V+C RC L + + + VG
Sbjct: 2 SDILKCIGCGAPLQSEDKNKPGFV--------PEHNMFRDDVICRRCFRLKNYNEVQDVG 53
Query: 155 GNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILV 214
+ +++ + LS L +K ++V +VD+ DF GSF+ ++ + G IIL
Sbjct: 54 -----------LESEDFLKLLSGLADKKGIVVNVVDVFDFEGSFINAVKRIVGNKKIILA 102
Query: 215 VTKVDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRD 274
K+DLLPK + V +W+ K L V L S++ GI + S I ++ D
Sbjct: 103 ANKLDLLPKQINKRRVKEWLKRTARKYGLEADDVVLISAEKGWGIDDLLSSIANIRENED 162
Query: 275 VYILGSANVGKSAFINALLK-KMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGG 333
VY +G+ NVGKS IN L++ +GE+D S PGTTL I I
Sbjct: 163 VYTVGTTNVGKSTLINKLIEASVGEKDVVTT---------SRFPGTTLDMIDI-PLDETS 212
Query: 334 KLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIF 393
+YDTPG+ H+ +V ++L + P+ ++ + + + NE + T+F
Sbjct: 213 FMYDTPGIIQDHQMTHLVSEKELKIIMPKKEIKQRVYQL-------NEAQ-------TLF 258
Query: 394 WGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGW 453
+GGL RID + + F+ L ++ T+KA++ ++ +LG LTPP Q
Sbjct: 259 FGGLARIDYVSGGKRPLVCFFS-NDLNIHRTKTEKANDLWRNQLGDLLTPPGNPQ----- 312
Query: 454 KGLDRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHV 513
D + ++ E T + DV ISGLG+I++ P + I V V
Sbjct: 313 -NFDLNEVKAVRLE-TGKEKRDVMISGLGFITIGPGAKVI-----------------VRV 353
Query: 514 PKPVEVFVRNPM 525
PK V+V +RN +
Sbjct: 354 PKNVDVVLRNSI 365
>gi|50913635|ref|YP_059607.1| GTP-binding protein YqeH [Streptococcus pyogenes MGAS10394]
gi|50902709|gb|AAT86424.1| GTP-binding protein [Streptococcus pyogenes MGAS10394]
gi|94543275|gb|ABF33323.1| GTP-binding protein [Streptococcus pyogenes MGAS10270]
Length = 372
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 115/393 (29%), Positives = 183/393 (46%), Gaps = 48/393 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG +QT + + G+ KK + + C RC L H + IT V
Sbjct: 6 CIGCGIQIQTEDKEKAGFTPAAAL---KKGMETGELYCQRCFRLRHYNEITDV------- 55
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ DE L + AL+V ++DI DFNGS + + N ++LV K D+
Sbjct: 56 ----HITDDEFLRLLHEVGDSDALVVNVIDIFDFNGSIIPGLSRFISGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK V W+ E ++ L L V LTS+++ I + I + + GRDVY++G
Sbjct: 112 LPKSVKDGKVTQWLAERAHEEGLRPLDVMLTSAQNKYAIKDLIERINELRNGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G +D S PGTTL I+I G ++DTP
Sbjct: 172 TNVGKSTLINAIIQEITGNKDVITT---------SRFPGTTLDKIEI-PLDDGTFIFDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + ++L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLSPKELKIVSPKKEIKPKTYQLNPEQ--------------TLFLGGLSR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + F+ L+++ A+ FY K +G LTPP GK++ + L
Sbjct: 268 FDFINGERQGFTAFF-DNQLELHRTKLAGANAFYDKHVGTLLTPP-GKKELTAFPKL--- 322
Query: 460 RLLEIKFEDTERPASDVAISGLGWISVEPVRRS 492
++ E T D+ SGLGWI V + S
Sbjct: 323 ----VRHEFTIDQKMDIVFSGLGWIRVNGQKDS 351
>gi|397650376|ref|YP_006490903.1| GTPase YqeH [Streptococcus mutans GS-5]
gi|449893715|ref|ZP_21788892.1| GTP-binding protein YqeH [Streptococcus mutans SF12]
gi|450098940|ref|ZP_21858241.1| GTP-binding protein YqeH [Streptococcus mutans SF1]
gi|392603945|gb|AFM82109.1| GTPase YqeH [Streptococcus mutans GS-5]
gi|449221126|gb|EMC20928.1| GTP-binding protein YqeH [Streptococcus mutans SF1]
gi|449255714|gb|EMC53558.1| GTP-binding protein YqeH [Streptococcus mutans SF12]
Length = 368
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 111/387 (28%), Positives = 190/387 (49%), Gaps = 48/387 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT+ + GY E K + + C RC L H + IT V
Sbjct: 6 CIGCGAQIQTTAKEQAGYTPKSALE---KGLESGKIYCQRCFRLRHYNEITDV------- 55
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
+S D+ + L + + L+V ++DI DFNGS + ++ ++ ++LV K D+
Sbjct: 56 ----HISDDDFLKLLHEVGDSRTLVVNVIDIFDFNGSVIPGLQRFISSSDLLLVGNKADI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W++E ++ L L + L S+++ I + ++I++ ++GRDVY++G
Sbjct: 112 LPKSVKSGKITQWLMERAHEEGLRPLDLILISAQNKWAIKELIAKIEELRQGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G+++ S PGTTL I+I G ++DTP
Sbjct: 172 TNVGKSTLINAIIQEITGDKNIITT---------SRFPGTTLDKIEI-PLNDGSYIFDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + + L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLSDKALKYISPKKEIKPKTYQLNPEQ--------------TLFLGGLAR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + T Y +L+++ AD FY K +G LTPP K+ A K
Sbjct: 268 FDYV-TGDKQGFTAYFDNNLKLHRTKLAGADAFYDKHIGSLLTPPDKKEMAAFPK----- 321
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
++ E T + +D+ SGLGWI +
Sbjct: 322 ---LVRHEFTIKEKTDLVFSGLGWIRI 345
>gi|449887306|ref|ZP_21786721.1| GTP-binding protein YqeH [Streptococcus mutans SA41]
gi|449904711|ref|ZP_21792811.1| GTP-binding protein YqeH [Streptococcus mutans M230]
gi|449938690|ref|ZP_21805016.1| GTP-binding protein YqeH [Streptococcus mutans 2ST1]
gi|449942606|ref|ZP_21806101.1| GTP-binding protein YqeH [Streptococcus mutans 11A1]
gi|450039516|ref|ZP_21836227.1| GTP-binding protein YqeH [Streptococcus mutans T4]
gi|450078570|ref|ZP_21851060.1| GTP-binding protein YqeH [Streptococcus mutans N3209]
gi|450154621|ref|ZP_21877857.1| GTP-binding protein YqeH [Streptococcus mutans 21]
gi|450181255|ref|ZP_21887717.1| GTP-binding protein YqeH [Streptococcus mutans 24]
gi|449150345|gb|EMB54113.1| GTP-binding protein YqeH [Streptococcus mutans 11A1]
gi|449162533|gb|EMB65664.1| GTP-binding protein YqeH [Streptococcus mutans 2ST1]
gi|449200330|gb|EMC01363.1| GTP-binding protein YqeH [Streptococcus mutans T4]
gi|449209880|gb|EMC10376.1| GTP-binding protein YqeH [Streptococcus mutans N3209]
gi|449237723|gb|EMC36538.1| GTP-binding protein YqeH [Streptococcus mutans 21]
gi|449246925|gb|EMC45219.1| GTP-binding protein YqeH [Streptococcus mutans 24]
gi|449253035|gb|EMC51000.1| GTP-binding protein YqeH [Streptococcus mutans SA41]
gi|449259062|gb|EMC56610.1| GTP-binding protein YqeH [Streptococcus mutans M230]
Length = 368
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 111/387 (28%), Positives = 190/387 (49%), Gaps = 48/387 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT+ + GY E K + + C RC L H + IT V
Sbjct: 6 CIGCGAQIQTTAKEQAGYTPKSALE---KGLESGKIYCQRCFRLRHYNEITDV------- 55
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
+S D+ + L + + L+V ++DI DFNGS + ++ ++ ++LV K D+
Sbjct: 56 ----HISDDDFLKLLHEVGDSRTLVVNVIDIFDFNGSVIPGLQRFISSSDLLLVGNKADI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W++E ++ L L + L S+++ I + ++I++ ++GRDVY++G
Sbjct: 112 LPKSVKSGKITQWLMERAHEEGLRPLDLILISAQNKWAIKELIAKIEELRQGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G+++ S PGTTL I+I G ++DTP
Sbjct: 172 TNVGKSTLINAIIQEITGDKNIITT---------SRFPGTTLDKIEI-PLNDGSYIFDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + + L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLSDKALKYISPKKEIKPKTYQLNPEQ--------------TLFLGGLAR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + T Y +L+++ AD FY K +G LTPP K+ A K
Sbjct: 268 FDYV-TGDKQGFTAYFDNNLKLHRTKLAGADTFYDKHIGSLLTPPDKKEMAAFPK----- 321
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
++ E T + +D+ SGLGWI +
Sbjct: 322 ---LVRHEFTIKEKTDLVFSGLGWIRI 345
>gi|241894958|ref|ZP_04782254.1| GTP-binding protein [Weissella paramesenteroides ATCC 33313]
gi|241871676|gb|EER75427.1| GTP-binding protein [Weissella paramesenteroides ATCC 33313]
Length = 380
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 116/387 (29%), Positives = 181/387 (46%), Gaps = 47/387 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT D GY P + LK + V C RC L H + I V
Sbjct: 17 CIGCGALIQTDNKDEIGYT-PMSALLKSFEND--EVFCQRCFRLRHYNEIQPVN------ 67
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ R L + +L+V ++D+ DF+GS + + G N ++LV KVD+
Sbjct: 68 -----LTDDDFRRLLEQIADTDSLVVYVMDVFDFSGSLIPGLHRFVGNNDVLLVGNKVDV 122
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LP+ + DW+ + L + + LTS K+ I + I K +KGR VY++G
Sbjct: 123 LPRSLKRTKIKDWMRQQANIAGLRPIDIALTSGKNGDAIANLLDLIAKYRKGRSVYVVGV 182
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS IN ++K++ G+R S PGTTL I+I + DTP
Sbjct: 183 TNVGKSTLINQIIKEVTGDRTDVITT--------SRFPGTTLDRIEI-PLDDDSNIIDTP 233
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ + A + +DL ++PQ ++ ++F + +E T+F G L R
Sbjct: 234 GIIHQDQMAHYLGVKDLKYVSPQKEIKPKTFQLNAEQ--------------TLFMGALAR 279
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D ++ T +T Y +L ++ AD FY K G L PP + + L R
Sbjct: 280 FDYIQG-DRTGITAYFENNLLIHRTKLANADAFYNKHAGELLAPPT-TENLDKLPPLQRH 337
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
+F+ TE+ +D+ I GLGW++V
Sbjct: 338 -----EFKTTEK--TDIVIDGLGWLTV 357
>gi|365850841|ref|ZP_09391295.1| ribosome biogenesis GTPase YqeH [Lactobacillus parafarraginis
F0439]
gi|363718090|gb|EHM01445.1| ribosome biogenesis GTPase YqeH [Lactobacillus parafarraginis
F0439]
Length = 378
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 119/394 (30%), Positives = 184/394 (46%), Gaps = 47/394 (11%)
Query: 94 VNSAVASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAV 153
V+ V C GCGA +QT GY E K Q V C RC L H + I V
Sbjct: 8 VDGQVVHCVGCGAKVQTVNKSELGYTPKSALE---KGLQNGEVYCQRCFRLRHYNEIAPV 64
Query: 154 GGNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIIL 213
+S D+ + L+ + +LI+ +VDI D NGS ++ + G NP+IL
Sbjct: 65 S-----------LSDDDFLKLLTSISATDSLILYVVDIFDVNGSMISGLHRFVGDNPVIL 113
Query: 214 VVTKVDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGR 273
V K+D+LPK V DW+ + + + V L S+K+ + + +I+K + G+
Sbjct: 114 VGNKLDVLPKSLKKRKVRDWLRQQANAAGIRPIDVELISAKTNYDVDHLLDQIEKYRNGK 173
Query: 274 DVYILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGG 333
DVY++G NVGKS IN ++++ + K S PGTTL I I G
Sbjct: 174 DVYVVGVTNVGKSTLINGIIRQ--------STGIKELITTSRFPGTTLDRIDI-PLDDGH 224
Query: 334 KLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLN-GFTI 392
L DTPG+ + A + ++L + PQ ++ K + LN T+
Sbjct: 225 SLVDTPGIIQPEQMAHHLVGKELNLVTPQKTIKP---------------KGYQLNPAQTL 269
Query: 393 FWGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEG 452
F+ G+ R D + T Y +L ++ + AD FY LG L PP ++KA+
Sbjct: 270 FFAGVARFDYVTGDDREGFTVYAENNLYLHRTKLENADSFYADHLGGLLNPPSEERKAD- 328
Query: 453 WKGLDRERLLEIKFEDTERPASDVAISGLGWISV 486
+ L+R +F+ T++ SDV + GLGW++V
Sbjct: 329 FPALERH-----EFKTTQK--SDVVLEGLGWVTV 355
>gi|418994322|ref|ZP_13541957.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG290]
gi|377744119|gb|EHT68097.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG290]
Length = 366
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 129/432 (29%), Positives = 208/432 (48%), Gaps = 70/432 (16%)
Query: 96 SAVASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKT-VLCGRCRLLSHGHMITAVG 154
S + C GCGAPLQ+ + + PG+V +H+ F+ V+C RC L + + + VG
Sbjct: 2 SDILKCIGCGAPLQSEDKNKPGFV--------PEHNMFRDDVICRRCFRLKNYNEVQDVG 53
Query: 155 GNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILV 214
+ +++ + LS L +K ++V +VD+ DF GSF+ ++ + G IIL
Sbjct: 54 -----------LESEDFLKLLSGLADKKGIVVNVVDVFDFEGSFINAVKRIVGNKKIILA 102
Query: 215 VTKVDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRD 274
K+DLLPK + V +W+ K L V L S++ GI + S I ++ D
Sbjct: 103 ANKLDLLPKQINKRRVKEWLKRTARKYGLEADDVVLISAEKGWGIDDLLSSIANIRENED 162
Query: 275 VYILGSANVGKSAFINALLK-KMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGG 333
VYI+G+ NVGKS IN L++ +GE+D S PGTTL I I
Sbjct: 163 VYIVGTTNVGKSTLINKLIEASVGEKDVVTT---------SRFPGTTLDMIDI-PLDETS 212
Query: 334 KLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIF 393
+YDTPG+ H+ +V ++L + P+ ++ + + + NE + +F
Sbjct: 213 FMYDTPGIIQEHQMTHLVSEKELKIIMPKKEIKQRVYQL-------NEAQ-------ILF 258
Query: 394 WGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGW 453
+GGL RID + + F+ L ++ T+KA++ ++ +LG LTPP Q
Sbjct: 259 FGGLARIDYVSGGKRPLVCFFS-NDLNIHRTKTEKANDLWRNQLGDLLTPPGNPQ----- 312
Query: 454 KGLDRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHV 513
D + ++ E T + DV ISGLG+I++ P + I V V
Sbjct: 313 -NFDLNEVKAVRLE-TGKEKRDVMISGLGFITIGPGAKVI-----------------VRV 353
Query: 514 PKPVEVFVRNPM 525
PK V+V +RN +
Sbjct: 354 PKNVDVVLRNSI 365
>gi|357238329|ref|ZP_09125666.1| ribosome biogenesis GTPase YqeH [Streptococcus ictaluri 707-05]
gi|356753052|gb|EHI70173.1| ribosome biogenesis GTPase YqeH [Streptococcus ictaluri 707-05]
Length = 372
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 120/426 (28%), Positives = 194/426 (45%), Gaps = 61/426 (14%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG +QT GY E K + + C RC L H + IT V
Sbjct: 6 CIGCGIQIQTLSKSEVGYTPLSALE---KGLETGELYCQRCFRLRHYNDITDVN------ 56
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ DE L + AL++ ++DI DFNGS + + N ++LV K D+
Sbjct: 57 -----ITDDEFLTLLHEVGDSDALVLNVIDIFDFNGSVIPGLSRFVSGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W+ E ++ + V LTS+++ I + I + +KGRDVY++G
Sbjct: 112 LPKSVKDGKLTQWLTERAHEEGFRPVDVLLTSAQNKYAIKDLMKRIDQLRKGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G +D S PGTTL I+I G ++DTP
Sbjct: 172 TNVGKSTLINAIIQEITGNKDLITT---------SRFPGTTLDKIEI-PLDDGSFIFDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + A+DL ++P+ ++ +++ + E ++F GGL R
Sbjct: 222 GIIHRHQMAHYLSAKDLKYVSPKKEIKPKTYQLNPEQ--------------SLFLGGLGR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + F+ +L ++ + A FY+K LG LTPP GK++ + L
Sbjct: 268 FDFINGDRQGFTAFF-DNNLLLHRTKLEGASTFYEKHLGTLLTPP-GKKEVADFPKL--- 322
Query: 460 RLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVEV 519
++ E T D+ SGLGWI ++ + S + +A P+ V V
Sbjct: 323 ----VRHEFTIDDKMDIVFSGLGWIRIQANKES-------------KTRVAAWAPEGVAV 365
Query: 520 FVRNPM 525
VR +
Sbjct: 366 LVRKAL 371
>gi|15674473|ref|NP_268647.1| GTP-binding protein YqeH [Streptococcus pyogenes SF370]
gi|21909760|ref|NP_664028.1| GTP-binding protein YqeH [Streptococcus pyogenes MGAS315]
gi|28896548|ref|NP_802898.1| GTP-binding protein YqeH [Streptococcus pyogenes SSI-1]
gi|71910075|ref|YP_281625.1| GTP-binding protein YqeH [Streptococcus pyogenes MGAS5005]
gi|386362126|ref|YP_006071457.1| hypothetical protein SPYALAB49_000294 [Streptococcus pyogenes
Alab49]
gi|410679949|ref|YP_006932351.1| ribosome biogenesis GTPase YqeH [Streptococcus pyogenes A20]
gi|421891703|ref|ZP_16322471.1| GTP-binding protein YqeH, required for biogenesis of 30S ribosome
subunit [Streptococcus pyogenes NS88.2]
gi|13621572|gb|AAK33368.1| conserved hypothetical protein [Streptococcus pyogenes M1 GAS]
gi|21903945|gb|AAM78831.1| putative GTP-binding protein [Streptococcus pyogenes MGAS315]
gi|28811802|dbj|BAC64731.1| conserved hypothetical protein [Streptococcus pyogenes SSI-1]
gi|71852857|gb|AAZ50880.1| GTP-binding protein [Streptococcus pyogenes MGAS5005]
gi|350276535|gb|AEQ23903.1| hypothetical protein SPYALAB49_000294 [Streptococcus pyogenes
Alab49]
gi|379982527|emb|CCG26193.1| GTP-binding protein YqeH, required for biogenesis of 30S ribosome
subunit [Streptococcus pyogenes NS88.2]
gi|395453320|dbj|BAM29659.1| GTP-binding protein [Streptococcus pyogenes M1 476]
gi|409692538|gb|AFV37398.1| ribosome biogenesis GTPase YqeH [Streptococcus pyogenes A20]
Length = 372
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 115/393 (29%), Positives = 181/393 (46%), Gaps = 48/393 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG +QT + + G+ KK + + C RC L H + IT V
Sbjct: 6 CIGCGIQIQTEDKEKAGFTPAAAL---KKGMETGELYCQRCFRLRHYNEITDV------- 55
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ DE L + AL+V ++DI DFNGS + + N ++LV K D+
Sbjct: 56 ----HITDDEFLRLLHEVGDSDALVVNVIDIFDFNGSIIPGLSRFISGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK V W+ E ++ L L V LTS+++ I + I + + GRDVY++G
Sbjct: 112 LPKSVKDGKVTQWLTERAHEEGLRPLDVMLTSAQNKYAIKDLIGRINELRNGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G +D S PGTTL I+I G ++DTP
Sbjct: 172 TNVGKSTLINAIIQEITGNKDVITT---------SRFPGTTLDKIEI-PLDDGTFIFDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + ++L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLSPKELKIVSPKKEIKPKTYQLNPEQ--------------TLFLGGLAR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + F+ L+++ AD FY K +G LTPP K+ K + E
Sbjct: 268 FDFINGERQGFTAFF-DNQLELHRTKLAGADAFYDKHVGTLLTPPDKKELTAFPKLVRHE 326
Query: 460 RLLEIKFEDTERPASDVAISGLGWISVEPVRRS 492
++ K D+ SGLGWI V + S
Sbjct: 327 FTIDQKM--------DIVFSGLGWIRVNGQKDS 351
>gi|94991776|ref|YP_599875.1| GTP-binding protein YqeH [Streptococcus pyogenes MGAS2096]
gi|417857511|ref|ZP_12502570.1| GTPase YqeH [Streptococcus pyogenes HKU QMH11M0907901]
gi|94545284|gb|ABF35331.1| GTP-binding protein [Streptococcus pyogenes MGAS2096]
gi|387934466|gb|EIK42579.1| GTPase YqeH [Streptococcus pyogenes HKU QMH11M0907901]
Length = 372
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 115/393 (29%), Positives = 182/393 (46%), Gaps = 48/393 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG +QT + + G+ KK + + C RC L H + IT V
Sbjct: 6 CIGCGIQIQTEDKEKAGFTPAAAL---KKGMETGELYCQRCFRLRHYNEITDV------- 55
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ DE L + AL+V ++DI DFNGS + + N ++LV K D+
Sbjct: 56 ----HITDDEFLRLLHEVGDSDALVVNVIDIFDFNGSIIPGLSRFISGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK V W+ E ++ L L V LTS+++ I + I + + GRDVY++G
Sbjct: 112 LPKSVKDGKVTQWLTERAHEEGLRPLDVMLTSAQNKYAIKDLIERINELRNGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G +D S PGTTL I+I G ++DTP
Sbjct: 172 TNVGKSTLINAIIQEITGNKDVITT---------SRFPGTTLDKIEI-PLDDGTFIFDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + ++L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLSPKELKIVSPKKEIKPKTYQLNPEQ--------------TLFLGGLSR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + F+ L+++ AD FY K +G LTPP K++ + L
Sbjct: 268 FDFINGERQGFTAFF-DNQLELHRTKLAGADAFYDKHVGTLLTPP-DKKELTAFPKL--- 322
Query: 460 RLLEIKFEDTERPASDVAISGLGWISVEPVRRS 492
++ E T D+ SGLGWI V + S
Sbjct: 323 ----VRHEFTIDQKMDIVFSGLGWIRVNGQKDS 351
>gi|169829302|ref|YP_001699460.1| GTP-binding protein YqeH [Lysinibacillus sphaericus C3-41]
gi|168993790|gb|ACA41330.1| Hypothetical yqeH protein [Lysinibacillus sphaericus C3-41]
Length = 367
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 124/423 (29%), Positives = 192/423 (45%), Gaps = 65/423 (15%)
Query: 100 SCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGY 159
+C GCG +QT + A GY P + E V+C RC L + + I V
Sbjct: 6 NCIGCGTTIQTEDKTAVGYAPPSSLEKD-------VVICQRCFRLKNYNEIQPVS----- 53
Query: 160 AGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVD 219
++ D+ L+ L ++ LIVK+VDI DFNGS+L + G NP++L+ K D
Sbjct: 54 ------LTDDDFLRILNGLGTQQGLIVKIVDIFDFNGSWLPGLHRFVGKNPVLLIANKAD 107
Query: 220 LLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILG 279
LLPK V +W+ L + V L S+ G+ I + ++G++VY++G
Sbjct: 108 LLPKSVKPKKVINWLKREAKALGLQPVDVLLVSAHKGKGMAEAMEAIDEYRQGQNVYVVG 167
Query: 280 SANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS FIN ++K+ A + S PGTTL I+I G L+DTP
Sbjct: 168 CTNVGKSTFINRIIKQ--------ATGEGEVITTSHFPGTTLDMIEI-PLDDGSALFDTP 218
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ HH+ A + + +L + P+ ++ + + + N G T+F G L R
Sbjct: 219 GIINHHQMAHHIDSSELKYIMPKKEIKPKVY------QQN--------AGQTLFIGALAR 264
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D ++ + T + L ++ +KAD Y + G L PP AE L
Sbjct: 265 FDFIQG-DRSAFTIHVANDLPIHRTKLEKADTLYTEHKGDLLAPP----TAEFIDQL--P 317
Query: 460 RLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVEV 519
L+ +F E +DV SGLGWI+V+ + +A + PK V+V
Sbjct: 318 PLVRHEFSIKEA-KTDVVFSGLGWITVQ----------------HANVVVAAYAPKGVQV 360
Query: 520 FVR 522
+R
Sbjct: 361 SIR 363
>gi|429205409|ref|ZP_19196686.1| GTPase YqeH [Lactobacillus saerimneri 30a]
gi|428146481|gb|EKW98720.1| GTPase YqeH [Lactobacillus saerimneri 30a]
Length = 369
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 126/426 (29%), Positives = 190/426 (44%), Gaps = 66/426 (15%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +Q+ + PGY KK + + C RC L H + +T V
Sbjct: 8 CIGCGAAIQSEDQAQPGYTPQAAI---KKGLESGQLYCQRCFRLRHYNEVTDVN------ 58
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ + L ++ +LIV +VDI DFNGS + ++ G NPIILV K DL
Sbjct: 59 -----ITDKDFLRLLDNIGNTDSLIVNVVDIFDFNGSLIPGLQRFVGDNPIILVGNKEDL 113
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + + DW+ + K+ L +V LTS+K I + I K ++GRDV ++G
Sbjct: 114 LPKSLKRSKLQDWMRQEANKQGLYPEAVILTSAKKGFAIERLLRLIDKYRQGRDVQVVGV 173
Query: 281 ANVGKSAFINALLK-KMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS IN ++K ++G ++ S PGTTL I+I F G + DTP
Sbjct: 174 TNVGKSTLINRIIKQRIGIQNLITT---------SRFPGTTLDRIEI-PFGDGKNMIDTP 223
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ + A + + L PQ ++ + + + E T+F G L R
Sbjct: 224 GIIHKGQMAHYLTGKALKLATPQKEIKPKVYQLNGEQ--------------TLFLGALAR 269
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + +T Y +L ++ AD FY K G L PP ++ + L R
Sbjct: 270 FDFIS--GPKGVTVYVDNNLMIHRTKMANADNFYTKHAGELLQPP-NQEDMAAFPPLKR- 325
Query: 460 RLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVEV 519
FE T +D+ +GLGWI+V+P + +A P+ V+V
Sbjct: 326 ------FEFTVSEKTDIVFAGLGWITVKPGAK-----------------VAAWAPENVDV 362
Query: 520 FVRNPM 525
VR M
Sbjct: 363 VVRRAM 368
>gi|403379144|ref|ZP_10921201.1| hypothetical protein PJC66_04878 [Paenibacillus sp. JC66]
Length = 369
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 119/392 (30%), Positives = 181/392 (46%), Gaps = 62/392 (15%)
Query: 100 SCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGY 159
C GCG LQ + A GYV P+ LK V+C RC + H + +T+ N
Sbjct: 6 QCEGCGVHLQMDDPSALGYV-PEQALLKIP------VICQRCFRIKHYNEMTSETPN--- 55
Query: 160 AGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVD 219
D+ L H+ ++L++ ++D+ DF GS ++ ++ G+NP++LVV K+D
Sbjct: 56 --------QDDFLRMLGHIAHTRSLVIHIIDVFDFEGSLISGLQRFIGSNPVLLVVNKMD 107
Query: 220 LLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILG 279
LLPK T++N V +WV + L V V L S+K G + ++ ++GRDVY++G
Sbjct: 108 LLPKVTNWNKVVNWVQKQAKDNGLKVADVALCSAKKGIGFDTLLKKLDSLRQGRDVYVVG 167
Query: 280 SANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
+ N GKS IN L+K + + S PGTTL ++I G + DTP
Sbjct: 168 ATNAGKSTLINRLIKDYSDLESELTT--------SHYPGTTLNMVRI-PLDDGKAIIDTP 218
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ HR + VV L L P ++ + + NE + T+F+G LVR
Sbjct: 219 GIVYKHRLSEVVPKPLLSTLLPDKPIKPVVYQL-------NEKQ-------TLFFGSLVR 264
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + ++ T Y + V+ ++ADE Y + G L PP Q
Sbjct: 265 FDFARGERQS-FTCYTSNRIPVHRTKLERADELYAQHKGEMLAPPTLDQ----------- 312
Query: 460 RLLEIKFEDTERPAS-------DVAISGLGWI 484
LE T P S ++ ISGLGWI
Sbjct: 313 --LEHIPHWTRVPVSIRKGQEAEILISGLGWI 342
>gi|313890885|ref|ZP_07824509.1| ribosome biogenesis GTPase YqeH [Streptococcus pseudoporcinus SPIN
20026]
gi|416852866|ref|ZP_11910011.1| ribosome biogenesis GTPase YqeH [Streptococcus pseudoporcinus LQ
940-04]
gi|313120783|gb|EFR43898.1| ribosome biogenesis GTPase YqeH [Streptococcus pseudoporcinus SPIN
20026]
gi|356740355|gb|EHI65587.1| ribosome biogenesis GTPase YqeH [Streptococcus pseudoporcinus LQ
940-04]
Length = 371
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 116/388 (29%), Positives = 183/388 (47%), Gaps = 49/388 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG +QT + G+ K + + C RC L H + I+ V
Sbjct: 6 CIGCGVKIQTENKEEIGFTPQAAV---TKGLETGELYCQRCFRLRHYNEISDVQ------ 56
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
+S D+ + L + AL+V +VDI DFNGS + + N ++LV K D+
Sbjct: 57 -----MSDDDFLKLLHEVGESDALVVNVVDIFDFNGSVIPGLSRFVAGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK T + V W++E ++ L + V LTS+++ I + + I K ++GRDVY++G
Sbjct: 112 LPKSTKDSKVNQWLLERAHEEGLRPIDVMLTSAQNNYAIKDLIASIDKLRRGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS INA+++++ K S PGTTL I+I G ++DTPG
Sbjct: 172 TNVGKSTLINAIIQEIS--------GNKNIITTSRFPGTTLDKIEI-PLEDGTYIFDTPG 222
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLN-GFTIFWGGLVR 399
+ H+ A + A++L ++P+ ++ K++ LN G T+F GL R
Sbjct: 223 IIHRHQMAHYLSAKNLKYISPKKEIKP---------------KTYQLNPGQTLFLAGLGR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + L + T Y +L ++ + AD FY K G LTPP + + D
Sbjct: 268 FDFISGLKQG-FTAYFDNNLTLHRTKLEGADAFYHKHRGSLLTPPDNENR-------DFP 319
Query: 460 RLLEIKFEDTERPASDVAISGLGWISVE 487
L+ +F + D+ SGLGWI +
Sbjct: 320 ELISYEFFIDSK--MDLVFSGLGWICIN 345
>gi|386729298|ref|YP_006195681.1| GTP-binding protein [Staphylococcus aureus subsp. aureus 71193]
gi|387602937|ref|YP_005734458.1| GTPase family protein [Staphylococcus aureus subsp. aureus ST398]
gi|404478947|ref|YP_006710377.1| GTPase [Staphylococcus aureus 08BA02176]
gi|418310191|ref|ZP_12921741.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21331]
gi|418978321|ref|ZP_13526122.1| GTP-binding protein [Staphylococcus aureus subsp. aureus DR10]
gi|283470875|emb|CAQ50086.1| GTPase family protein [Staphylococcus aureus subsp. aureus ST398]
gi|365237648|gb|EHM78494.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21331]
gi|379993937|gb|EIA15382.1| GTP-binding protein [Staphylococcus aureus subsp. aureus DR10]
gi|384230591|gb|AFH69838.1| GTP-binding protein [Staphylococcus aureus subsp. aureus 71193]
gi|404440436|gb|AFR73629.1| putative GTPase [Staphylococcus aureus 08BA02176]
Length = 366
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 129/432 (29%), Positives = 208/432 (48%), Gaps = 70/432 (16%)
Query: 96 SAVASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKT-VLCGRCRLLSHGHMITAVG 154
S + C GCGA LQ+ + + PG+V +H+ F+ V+C RC L + + + VG
Sbjct: 2 SDILKCIGCGASLQSEDKNKPGFV--------PEHNMFRDDVICRRCFRLKNYNEVQDVG 53
Query: 155 GNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILV 214
+ +++ + LS L +K ++V +VD+ DF GSF+ ++ + G IIL
Sbjct: 54 -----------LESEDFLKLLSGLADKKGIVVNVVDVFDFEGSFINAVKRIVGNKKIILA 102
Query: 215 VTKVDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRD 274
K+DLLPK + V +W+ K L V L S++ GI + S I ++ D
Sbjct: 103 ANKLDLLPKQINKRRVKEWLKRTARKYGLEADDVVLISAEKGWGIDDLLSSIANIRENED 162
Query: 275 VYILGSANVGKSAFINALLK-KMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGG 333
VYI+G+ NVGKS IN L++ +GE+D S PGTTL I I
Sbjct: 163 VYIVGTTNVGKSTLINKLIEASVGEKDVVTT---------SRFPGTTLDMIDI-PLDETS 212
Query: 334 KLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIF 393
+YDTPG+ H+ +V ++L + P+ ++ + + + NE + T+F
Sbjct: 213 FMYDTPGIIQDHQMTHLVSEKELKIIMPKKEIKQRVYQL-------NEAQ-------TLF 258
Query: 394 WGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGW 453
+GGL RID + + F+ L ++ T+KA++ ++ +LG LTPP Q
Sbjct: 259 FGGLARIDYVSGGKRPLVCFFS-NDLNIHRTKTEKANDLWRNQLGDLLTPPGNPQ----- 312
Query: 454 KGLDRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHV 513
D + ++ E T + DV ISGLG+I++ P + I V V
Sbjct: 313 -NFDLNEVKAVRLE-TGKEKRDVMISGLGFITIGPGAKVI-----------------VRV 353
Query: 514 PKPVEVFVRNPM 525
PK V+V +RN +
Sbjct: 354 PKNVDVVLRNSI 365
>gi|332524018|ref|ZP_08400270.1| ribosome biogenesis GTPase YqeH [Streptococcus porcinus str.
Jelinkova 176]
gi|332315282|gb|EGJ28267.1| ribosome biogenesis GTPase YqeH [Streptococcus porcinus str.
Jelinkova 176]
Length = 371
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 114/386 (29%), Positives = 183/386 (47%), Gaps = 47/386 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG +QT + G+ P KK + + C RC L H + I+ V
Sbjct: 6 CIGCGVKIQTENKEEIGFT-PQV--AVKKGMETGELYCQRCFRLRHYNEISDVQ------ 56
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
+S D+ L + AL+V +VDI DFNGS + + N ++LV K D+
Sbjct: 57 -----ISDDDFLTLLHEVGDSDALVVNVVDIFDFNGSVIPGLSRFVAGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK T + V W++E ++ L + V LTS+++ I + + I K ++GRDVY++G
Sbjct: 112 LPKSTKDSKVNQWLLERAHEEGLRPIDVMLTSAQNKYAIKELIALIDKFRRGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS INA+++++ K S PGTTL I+I G ++DTPG
Sbjct: 172 TNVGKSTLINAIIQEIS--------GNKNIITTSRFPGTTLDKIEI-PLEDGTYIFDTPG 222
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ H+ A + A+DL ++P+ ++ +++ + + G T+F GL R
Sbjct: 223 IIHRHQMAHYLSAKDLKYISPKKEIKPKTYQLNA--------------GQTLFLAGLGRF 268
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D + + + T Y +L ++ + AD FY K G L PP + + D
Sbjct: 269 DFISGIKQG-FTAYFDNNLALHRTKLEGADAFYHKHRGSLLIPPDNENR-------DFPE 320
Query: 461 LLEIKFEDTERPASDVAISGLGWISV 486
L+ +F + D+ SGLGWI +
Sbjct: 321 LINYEFFIDSK--MDLVFSGLGWICI 344
>gi|212638655|ref|YP_002315175.1| GTP-binding protein YqeH [Anoxybacillus flavithermus WK1]
gi|212560135|gb|ACJ33190.1| Predicted GTPase [Anoxybacillus flavithermus WK1]
Length = 372
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 117/396 (29%), Positives = 177/396 (44%), Gaps = 50/396 (12%)
Query: 94 VNSAVASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAV 153
+ S C GCG +QT + GY P E ++C RC L H + + V
Sbjct: 5 IMSEQVICIGCGVTIQTEDETKVGYAPPSALERDP-------IICQRCFRLKHYNEVQDV 57
Query: 154 GGNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIIL 213
++ D+ L + + L+VK+VDI DFNGS+L + G ++L
Sbjct: 58 S-----------LTDDDFLNILHGIGQADGLVVKIVDIFDFNGSWLPGLHRFVGKKDVLL 106
Query: 214 VVTKVDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGR 273
V KVDLLPK + W+ + + L V L S+ G+ V + I + + +
Sbjct: 107 VGNKVDLLPKSVKHEKITRWMKQTARELGLQPRDVFLVSAHKGYGMKEVMTAIDEYRNEK 166
Query: 274 DVYILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGG 333
DVY++G NVGKS FIN ++K+ A + S PGTTL I+I G
Sbjct: 167 DVYVVGCTNVGKSTFINRIIKE--------ATGKGNVITTSYFPGTTLDMIEI-PLDDGS 217
Query: 334 KLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIF 393
LYDTPG+ HH+ A V +DL + P+ ++ + + + NE + T+F
Sbjct: 218 ALYDTPGIINHHQMAHFVDKKDLKVITPKKEIKPKVYQL-------NEQQ-------TLF 263
Query: 394 WGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGW 453
+GGL R+D + Y L ++ + ADE Y++ LG L PP K E
Sbjct: 264 FGGLARLDYVSG-GRRSFVCYMSNELFIHRTKREHADELYERHLGELLQPP-RKSYCEQL 321
Query: 454 KGLDRERLLEIKFEDTERPASDVAISGLGWISV-EP 488
L + P +D+ SGLGW++ EP
Sbjct: 322 PPLVAHHF------TLKEPKTDIVFSGLGWVTCHEP 351
>gi|299822864|ref|ZP_07054750.1| ribosome biogenesis GTPase YqeH [Listeria grayi DSM 20601]
gi|299816393|gb|EFI83631.1| ribosome biogenesis GTPase YqeH [Listeria grayi DSM 20601]
Length = 366
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 117/387 (30%), Positives = 179/387 (46%), Gaps = 52/387 (13%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT + + GY K T++C RC L H + I V
Sbjct: 7 CIGCGAVIQTEDPEKIGYA-------PKSSLDKDTIICRRCFRLKHYNEIQDVS------ 53
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ + L+ + +KALIV +VDI DF+GS+L + AG NP++LV K DL
Sbjct: 54 -----LTDDDFLKILNTIGAKKALIVYVVDIFDFDGSWLPGLNRFAGDNPVLLVGNKADL 108
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + + W+ + + L L S++ G + I + G DVYI+G
Sbjct: 109 LPKSLKHDKLIKWMRGRSRELGLQAKDAVLVSAEKNTGFDELLDTIDDLRGGEDVYIVGC 168
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLY-DTP 339
NVGKS IN ++K+ +Q PGTTL I+I L GKL DTP
Sbjct: 169 TNVGKSTLINQIIKRASGESNVVTTSQ--------FPGTTLDKIEIP--LADGKLLVDTP 218
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ HH+ A V + L + P+S ++ F + E T+F+G L R
Sbjct: 219 GIINHHQMAHFVSGKTLKLMMPKSEIKPLVFQLNEEQ--------------TLFFGALAR 264
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
+D + Y L+ + +KA + Y+ + G L PP ++ A D
Sbjct: 265 LD-YESGGRKSFVVYMSNQLKTHRTKLEKATQLYETQAGEVLAPPTKEEIA------DLP 317
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
+L+ +F+ E+ D+ SGLGW++V
Sbjct: 318 KLVPYQFQLKEK--QDIVFSGLGWVTV 342
>gi|392972265|ref|ZP_10337657.1| ribosome biogenesis GTPase [Staphylococcus equorum subsp. equorum
Mu2]
gi|403046410|ref|ZP_10901879.1| GTP-binding protein YqeH [Staphylococcus sp. OJ82]
gi|392509978|emb|CCI60960.1| ribosome biogenesis GTPase [Staphylococcus equorum subsp. equorum
Mu2]
gi|402763106|gb|EJX17199.1| GTP-binding protein YqeH [Staphylococcus sp. OJ82]
Length = 366
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 128/431 (29%), Positives = 210/431 (48%), Gaps = 68/431 (15%)
Query: 96 SAVASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGG 155
+ + C GCGAPLQ+ + DA GYV P+ + L ++ V+C RC L + + + VG
Sbjct: 2 TEILKCIGCGAPLQSEDPDAAGYV-PE-HNLHRED-----VICKRCFRLKNYNEVQDVG- 53
Query: 156 NGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVV 215
+ +++ L+ L EK ++V +VD+ DF GSF+ I+ + G IILV
Sbjct: 54 ----------LDSEDFLNLLNGLADEKGIVVNVVDVFDFEGSFINAIKRIVGNKKIILVA 103
Query: 216 TKVDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDV 275
K+DLLPK + V +W+ + K L V L S++ GI + + I + +V
Sbjct: 104 NKLDLLPKQINKRRVKEWLKKTARKYGLETEDVVLISAEKNEGIDDLLASINTLRNNDNV 163
Query: 276 YILGSANVGKSAFINALLKK-MGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGK 334
YI+G+ NVGKS IN L+++ +GE+D S PGTTL I I
Sbjct: 164 YIVGTTNVGKSTLINKLIERSVGEKDVVTT---------SRFPGTTLDMIDI-PLDDTSF 213
Query: 335 LYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFW 394
++DTPGV H+ VV ++L + P+ ++ + + + NE G T+F+
Sbjct: 214 MFDTPGVIQEHQMTHVVTDDELKTIMPKKEVKQRVYQL-------NE-------GQTLFF 259
Query: 395 GGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWK 454
GG+ RID + + + + L ++ T+ A+E ++ +LG L+PP
Sbjct: 260 GGIARIDYVSGGRRSLVCHFS-NELNIHRTKTENANELWKNQLGALLSPP------HNPD 312
Query: 455 GLDRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVP 514
D + + ++ E T + DV ISGLG+I+++ + I V VP
Sbjct: 313 NFDLQNVKAVRLE-TGKEKRDVMISGLGFITIDEGAKVI-----------------VRVP 354
Query: 515 KPVEVFVRNPM 525
K V+V +RN +
Sbjct: 355 KNVDVVLRNSI 365
>gi|191638679|ref|YP_001987845.1| GTP-binding protein YqeH [Lactobacillus casei BL23]
gi|190712981|emb|CAQ66987.1| Predicted GTPase [Lactobacillus casei BL23]
Length = 356
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 117/380 (30%), Positives = 179/380 (47%), Gaps = 48/380 (12%)
Query: 108 LQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYAGGKQFVS 167
+QT++ PGY+ T K + C RC L H + I V ++
Sbjct: 1 MQTTDPKKPGYLPKATLS---KADPDDEIYCQRCFRLRHYNEIAPVT-----------LT 46
Query: 168 ADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDLLPKGTDF 227
D+ L+ + ALIV ++DI DFNGS + + G NP+ILV K D+LPK +
Sbjct: 47 DDDFLRLLNAIGESNALIVNVIDIFDFNGSVIPGLHRFVGDNPVILVGNKADVLPKSLNP 106
Query: 228 NCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGSANVGKSA 287
N + +W+ + + L ++ L S+K G+ + I+K + RDVY++G N GKS
Sbjct: 107 NRLKNWLQQQAKAQGLRPVATMLASAKKGFGVDELLDAIEKYRDHRDVYVVGVTNTGKST 166
Query: 288 FINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPGVHLHHR 346
IN ++K++ G D S PGTTL I I G L DTPG+ H+
Sbjct: 167 LINRIIKELTGVEDLITT---------SRFPGTTLDRIMI-PLDDGQSLIDTPGIIHRHQ 216
Query: 347 QAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRIDLLKVL 406
A V +DL ++P S ++ ++ + NE G TIF GGL R D L+
Sbjct: 217 MAHFVGPKDLKLVSPTSVIKPATYQL-------NE-------GQTIFLGGLARFDYLRG- 261
Query: 407 PETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRERLLEIKF 466
Y L ++ + AD+FYQK +G L+PP + + L ++F
Sbjct: 262 GRNSFVIYTDNQLTLHRTKLENADDFYQKHVGGLLSPP-QPDEVPDFPPL-------VRF 313
Query: 467 EDTERPASDVAISGLGWISV 486
E T + +D+ +GLGWI+V
Sbjct: 314 EFTPKEKADLVFAGLGWITV 333
>gi|323339581|ref|ZP_08079855.1| GTP-binding protein [Lactobacillus ruminis ATCC 25644]
gi|347525535|ref|YP_004832283.1| GTP-binding protein YqeH [Lactobacillus ruminis ATCC 27782]
gi|417973879|ref|ZP_12614713.1| GTPase YqeH [Lactobacillus ruminis ATCC 25644]
gi|323092976|gb|EFZ35574.1| GTP-binding protein [Lactobacillus ruminis ATCC 25644]
gi|345284494|gb|AEN78347.1| GTP-binding protein YqeH [Lactobacillus ruminis ATCC 27782]
gi|346329750|gb|EGX98035.1| GTPase YqeH [Lactobacillus ruminis ATCC 25644]
Length = 372
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 122/394 (30%), Positives = 186/394 (47%), Gaps = 48/394 (12%)
Query: 95 NSAVASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVG 154
NS C GCGA +QT + PG++ E K + + C RC L H + V
Sbjct: 4 NSDELYCIGCGAKIQTVDPQEPGFMPQSALE---KRTDDEDLYCKRCFRLRHYNETADVS 60
Query: 155 GNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILV 214
++ D+ L+ + ALIV +VDI DF+GS + + G NPI++V
Sbjct: 61 -----------LTDDDFLALLNQIGESDALIVNVVDIFDFSGSIIPGLHRFVGNNPILMV 109
Query: 215 VTKVDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRD 274
K DLLP+ + + DW+ ++ + L + V LTS+ I + I K ++GRD
Sbjct: 110 GNKEDLLPRSLKRSKIRDWLRQSANAQGLRPVEVCLTSASKGHEIDRLMELIDKYREGRD 169
Query: 275 VYILGSANVGKSAFINALLK-KMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGG 333
VY++G NVGKS IN ++K + G D S PGTTL I+I F G
Sbjct: 170 VYVVGVTNVGKSTLINQIIKHQTGISDLITT---------SRFPGTTLDRIEI-PFGDGR 219
Query: 334 KLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIF 393
L DTPG+ + A + ++L +PQ ++ + + + NE G T+F
Sbjct: 220 FLIDTPGIIHKDQMAHYLSPKELRLASPQKEIKPKVYQL-------NE-------GQTLF 265
Query: 394 WGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGW 453
G L R D + + + Y +L ++ T+ A FY+K G L PP E
Sbjct: 266 LGALARFDYVSG-EKQGVVVYLDNNLMIHRTKTENASAFYEKHAGKLLNPP----SEEEM 320
Query: 454 KGLDRERLLEIKFEDTERPASDVAISGLGWISVE 487
K +L+ +F+ TE+ SD+ +GLGWISV+
Sbjct: 321 KTF--PKLVRFEFKVTEK--SDLVFAGLGWISVK 350
>gi|169350470|ref|ZP_02867408.1| hypothetical protein CLOSPI_01238 [Clostridium spiroforme DSM 1552]
gi|169292790|gb|EDS74923.1| ribosome biogenesis GTPase YqeH [Clostridium spiroforme DSM 1552]
Length = 365
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 121/425 (28%), Positives = 196/425 (46%), Gaps = 67/425 (15%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C+GCGA +Q+ + + G+V KK VLC RC L + H +
Sbjct: 7 CFGCGAVIQSEDENEIGFV-------PKKALNNDKVLCKRCFRLKNYHELQ--------- 50
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
K +++D+ L + L+V L+D+ D+NGS + + N I++V K D+
Sbjct: 51 --KTNLTSDDFLNILQEIGNHDCLVVYLIDLFDYNGSLINGLPRHLNNNDILVVGNKRDI 108
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W+ + + + V L+S + + ++I + + GRDVYI+G
Sbjct: 109 LPKSLKDIKIIHWLRRQLKETGIKPVDVILSSGVKNYNLDLLINKINEYRHGRDVYIVGV 168
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS+ INALLK G D ++ PGTTL I+I A LYD+PG
Sbjct: 169 TNVGKSSLINALLKHYGTGDNNLITTSEF-------PGTTLDLIEI-ALDDHSYLYDSPG 220
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ H+ A +V EDL + P++ L+ ++ + S ++++GGL R
Sbjct: 221 IINPHQMAHLVKDEDLKTIIPKNELKPINYQLDSNQ--------------SLYFGGLARF 266
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D +K + T Y PKSL+++ + +D Y + L TL P I + K D +
Sbjct: 267 DFIKG-NHSSFTCYFPKSLKIHRTKLENSDGLYNRHL--TLKPEIEEIK-------DIKD 316
Query: 461 LLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVEVF 520
++ F+ D+ ISGLG++SV ++ +HVPK V VF
Sbjct: 317 MVAYDFK-LPNYKVDLVISGLGFVSVNCANAKVK----------------IHVPKGVGVF 359
Query: 521 VRNPM 525
+R +
Sbjct: 360 IREAL 364
>gi|335996450|ref|ZP_08562367.1| GTP-binding protein [Lactobacillus ruminis SPM0211]
gi|335351520|gb|EGM53011.1| GTP-binding protein [Lactobacillus ruminis SPM0211]
Length = 372
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 122/394 (30%), Positives = 186/394 (47%), Gaps = 48/394 (12%)
Query: 95 NSAVASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVG 154
NS C GCGA +QT + PG++ E K + + C RC L H + V
Sbjct: 4 NSDELYCIGCGAKIQTVDPQEPGFMPQSALE---KRTDDEDLYCKRCFRLRHYNETADVS 60
Query: 155 GNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILV 214
++ D+ L+ + ALIV +VDI DF+GS + + G NPI++V
Sbjct: 61 -----------LTDDDFLALLNQIGESDALIVNVVDIFDFSGSIIPGLHRFVGNNPILMV 109
Query: 215 VTKVDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRD 274
K DLLP+ + + DW+ ++ + L + V LTS+ I + I K ++GRD
Sbjct: 110 GNKEDLLPRSLKRSKIRDWLRQSANAQGLRPVEVCLTSASKGHEIDCLMELIDKYREGRD 169
Query: 275 VYILGSANVGKSAFINALLK-KMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGG 333
VY++G NVGKS IN ++K + G D S PGTTL I+I F G
Sbjct: 170 VYVVGVTNVGKSTLINQIIKHQTGISDLITT---------SRFPGTTLDRIEI-PFGDGR 219
Query: 334 KLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIF 393
L DTPG+ + A + ++L +PQ ++ + + + NE G T+F
Sbjct: 220 FLIDTPGIIHKDQMAHYLSPKELRLASPQKEIKPKVYQL-------NE-------GQTLF 265
Query: 394 WGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGW 453
G L R D + + + Y +L ++ T+ A FY+K G L PP E
Sbjct: 266 LGALARFDYVSG-EKQGVVVYLDNNLMIHRTKTENASAFYEKHAGKLLNPP----SEEEM 320
Query: 454 KGLDRERLLEIKFEDTERPASDVAISGLGWISVE 487
K +L+ +F+ TE+ SD+ +GLGWISV+
Sbjct: 321 KTF--PKLVRFEFKVTEK--SDLVFAGLGWISVK 350
>gi|341821188|emb|CCC57532.1| GTP-binding protein [Weissella thailandensis fsh4-2]
Length = 380
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 118/387 (30%), Positives = 177/387 (45%), Gaps = 47/387 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT + GY P + LK + V C RC L H + I V
Sbjct: 17 CIGCGALIQTDNKNEIGYT-PMSALLKSFEND--EVFCQRCFRLRHYNEIQPVN------ 67
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ R L + +L+V ++D+ DF+GS + + G N ++LV KVD+
Sbjct: 68 -----LTDDDFRRLLEQIADTNSLVVYVMDVFDFSGSLIPGLHRFVGNNDVLLVGNKVDV 122
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LP+ + DW+ + L L V LTS K+ I + I+K + GR VY++G
Sbjct: 123 LPRSLKRTKIKDWMRQQANIAGLRPLDVALTSGKNGDAIAHLLDLIEKYRHGRSVYVVGV 182
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS IN ++K++ G+RD S PGTTL I+I + DTP
Sbjct: 183 TNVGKSTLINQIIKEVTGDRDDVITT--------SRFPGTTLDRIEI-PLDDESNIVDTP 233
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ + A + A DL ++PQ ++ +F + + G T+F G L R
Sbjct: 234 GIIHQDQMAHYLSAADLKYVSPQKEIKPTTFQLNA--------------GQTLFMGALAR 279
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D ++ +T Y +L ++ AD FY K G L PP GLD
Sbjct: 280 FDYIQG-DRAGITAYFENNLLIHRTKLANADNFYDKHAGDLLAPPTA-------AGLDEL 331
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
L+ + E +D+ I GLGWI+V
Sbjct: 332 PPLQ-RHEFKTIVKTDIVIDGLGWITV 357
>gi|349611531|ref|ZP_08890766.1| ribosome biogenesis GTPase YqeH [Lactobacillus sp. 7_1_47FAA]
gi|348608624|gb|EGY58604.1| ribosome biogenesis GTPase YqeH [Lactobacillus sp. 7_1_47FAA]
Length = 370
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 120/386 (31%), Positives = 176/386 (45%), Gaps = 46/386 (11%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG+ LQ +S GY+ P + K +V C RC L H + IT V N
Sbjct: 8 CIGCGSILQDKDSKLSGYM-PHSAFNKMIQEPDTSVYCQRCFRLRHYNEITPVNENN--- 63
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
D+ L+ L +KALIV +VD+ DFN S +A + G N +LV KVDL
Sbjct: 64 --------DDFLRLLNSLGNKKALIVNVVDLFDFNNSLIASLDRFIGDNEFVLVGNKVDL 115
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
PK + + + DW+ + + L + L S+ I + + + + K D+Y +G+
Sbjct: 116 FPKNSKESKIKDWMRQEANRNGLFPKKIFLLSAIKKRNIDELINYLATKGKNEDIYFVGT 175
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS INA+++ E K S PGTTL I+I G L DTPG
Sbjct: 176 TNVGKSTLINAIIETRSE--------YKNLITTSKFPGTTLDSIKI-PLNEGHYLVDTPG 226
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ + A+ + DL +AP+ +L+ ++ + L G TIF GL RI
Sbjct: 227 ILSKKQMASRLTGSDLELVAPKKQLKPATYQL--------------LPGQTIFLAGLGRI 272
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D +K P + T Y + L ++ T ADEFY K L PP KG
Sbjct: 273 DFIKG-PASGFTIYVARDLYLHRTKTINADEFYLKHKSDLLNPPCDSDDLGALKGQ---- 327
Query: 461 LLEIKFEDTERPASDVAISGLGWISV 486
+ +E+ SD+ G+G+I+V
Sbjct: 328 ----LYSTSEK--SDILFGGVGFITV 347
>gi|333371748|ref|ZP_08463690.1| GTP-binding protein [Desmospora sp. 8437]
gi|332975677|gb|EGK12563.1| GTP-binding protein [Desmospora sp. 8437]
Length = 367
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 115/387 (29%), Positives = 181/387 (46%), Gaps = 54/387 (13%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG PLQT + PGYV P L+++H +C RC + H + + V +
Sbjct: 8 CEGCGVPLQTEHPEKPGYVPPAA--LEREH-----PICKRCFRIRHYNEVAQVEHD---- 56
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
D L + +AL+V++VD+ D +GS++ I+ G NPI+++ K+DL
Sbjct: 57 -------PDAYLAMLGEIGNRQALVVQVVDLFDLSGSWIPGIQRHTGGNPILILGNKLDL 109
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
PK + +WV ++ + + V LTS+ VA I+ ++GRDV++ G+
Sbjct: 110 FPKSAKVQRLKEWVYHTVSELGVKPVDVVLTSAAKGVHFDEVARAIETCREGRDVFVTGT 169
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
ANVGKS IN LLK+ G + S PGTTL I I GG +L D PG
Sbjct: 170 ANVGKSTLINRLLKEFGSGEEVITT--------SPYPGTTLDTIHI-PLEGGRELVDMPG 220
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ R + V ++L + P+S ++ + + + +G T+F+GGL R+
Sbjct: 221 IVRRDRMSEWVAPDELGEITPKSEIKPKVYQLN--------------DGQTLFFGGLARM 266
Query: 401 DLLKVL--PETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDR 458
D + + P C + SL ++ ADE ++K G L+PP
Sbjct: 267 DYSEGVRQPFVC---HMANSLYIHRTKLAHADEVWEKHRGELLSPPKDPSSLPP------ 317
Query: 459 ERLLEIKFEDTERPASDVAISGLGWIS 485
L+ F + D+ ISGLGWI+
Sbjct: 318 --LVRHTFHLDGKQKQDLVISGLGWIA 342
>gi|94987891|ref|YP_595992.1| GTP-binding protein YqeH [Streptococcus pyogenes MGAS9429]
gi|94541399|gb|ABF31448.1| GTP-binding protein [Streptococcus pyogenes MGAS9429]
Length = 372
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 114/393 (29%), Positives = 181/393 (46%), Gaps = 48/393 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG +QT + + G+ KK + + C RC L H + IT V
Sbjct: 6 CIGCGIQIQTEDKEKAGFTPAAAL---KKGMETGELYCQRCFRLRHYNEITDV------- 55
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ DE L + AL+V ++DI DFNGS + + N ++LV K D+
Sbjct: 56 ----HITDDEFLRLLHEVGDSDALVVNVIDIFDFNGSIIPGLSRFISGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK V W+ E ++ L L V LTS+++ I + I + + GRDVY++G
Sbjct: 112 LPKSVKDGKVTQWLTERAHEEGLRPLDVMLTSAQNKYAIKDLIERINELRNGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS INA+++++ G +D S PGTTL I+I G ++DTP
Sbjct: 172 TNVGKSTLINAIIQEITGNKDVITT---------SRFPGTTLDKIEI-PLDDGTFIFDTP 221
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + ++L ++P+ ++ +++ + E T+F GGL R
Sbjct: 222 GIIHRHQMAHYLSPKELKIVSPKKEIKPKTYQLNPEQ--------------TLFLGGLSR 267
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + + L+++ AD FY K +G LTPP K++ + L
Sbjct: 268 FDFINGERQGFTALF-DNQLELHRTKLAGADAFYDKHVGTLLTPP-DKKELTAFPKL--- 322
Query: 460 RLLEIKFEDTERPASDVAISGLGWISVEPVRRS 492
++ E T D+ SGLGWI V + S
Sbjct: 323 ----VRHEFTIDQKMDIVFSGLGWIRVNGQKDS 351
>gi|381210423|ref|ZP_09917494.1| GTPase YqeH [Lentibacillus sp. Grbi]
Length = 366
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 112/422 (26%), Positives = 195/422 (46%), Gaps = 65/422 (15%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QTS D GY T + +LC RC L H + I V
Sbjct: 6 CQGCGAYIQTSNPDEAGYTPESTLDRD-------IILCKRCFRLKHYNDIQDVS------ 52
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ E + ++ ++ L+V LVDI + +G+ + + + G P+IL K+DL
Sbjct: 53 -----MTDDDFLEMVGQIKDKEGLVVHLVDIFNVDGTMIKGLSSIVGDKPVILAANKMDL 107
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK T+ N + W+ + ++V +V+L SS G+ ++ I+ +++ + VYI+G+
Sbjct: 108 LPKSTNRNKLIKWLRTMAKEAGISVKAVYLISSVKGHGLSDLSEAIEAKRQKQSVYIVGT 167
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
ANVGKS FIN L+++ S PGTTLG I+I L DTPG
Sbjct: 168 ANVGKSTFINKLIQE--------TTGTTDVITTSYFPGTTLGFIEI-PLDDNTSLIDTPG 218
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ ++ A + DL + P+ ++ + + + NN+ T+++GGL R+
Sbjct: 219 IVNRNQIAHYISDNDLKIITPKKEVKPRVY------QLNNQ--------QTLYFGGLARL 264
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D +K ++ + ++ L ++ AD + +G L+PP + E L
Sbjct: 265 DFIKGERQSFVCYFS-NQLSIHRTKLKNADHLLSEHMGGLLSPP-DNETIEMMPDLTAHS 322
Query: 461 LLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVEVF 520
E+ +D+ GLGW+++ G++ +AVH P+ V +
Sbjct: 323 Y------QIEQEKTDIVFPGLGWVTI----------------PKGDITVAVHSPENVRIS 360
Query: 521 VR 522
+R
Sbjct: 361 LR 362
>gi|381182528|ref|ZP_09891330.1| GTPase YqeH [Listeriaceae bacterium TTU M1-001]
gi|380317578|gb|EIA20895.1| GTPase YqeH [Listeriaceae bacterium TTU M1-001]
Length = 366
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 120/425 (28%), Positives = 191/425 (44%), Gaps = 66/425 (15%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +Q+ + PGY + E ++ V+C RC L H + I V
Sbjct: 7 CIGCGAIIQSDDKSKPGYAPKSSLEKEQ-------VICQRCFRLKHYNEIQDVS------ 53
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ + L+ L +KALIV +VDI DF+GS+L + G NP++LV K DL
Sbjct: 54 -----LTDDDFLKILNDLGSQKALIVYVVDIFDFDGSWLPGLHRFVGNNPVLLVGNKADL 108
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + + ++ L V L S++ G + +I++ + G DV+++G
Sbjct: 109 LPKSLKRDKLTRYMRTRAKDLGLRATDVALISAEKGYGFESLMEQIEELRDGADVFVVGC 168
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS IN ++K A + S PGTTL I+I G L DTPG
Sbjct: 169 TNVGKSTLINRIIK--------FATGENNVITTSQFPGTTLDKIEI-PLEGNRVLVDTPG 219
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ HH+ A + + L + P+ ++ V+ + + T+F+G L R+
Sbjct: 220 IINHHQMAHFIGPKTLKLITPKKEIK----PVVYQLNQSQ----------TLFFGALARL 265
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D + + Y L+ + +KA+ Y+ + G+ L PP + A D
Sbjct: 266 DFTEG-ERSSFIVYMSNQLEPHRTKLEKANHLYETQRGLILNPPSEEDVA------DLPE 318
Query: 461 LLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVEVF 520
L+ +F R +D+ SGLGW+ V SG + + VPK V V
Sbjct: 319 LVPHQF--VIREKADIVFSGLGWVCV----------------PSGHVKVTAWVPKGVNVT 360
Query: 521 VRNPM 525
+R P+
Sbjct: 361 IREPL 365
>gi|209558820|ref|YP_002285292.1| GTP-binding protein YqeH [Streptococcus pyogenes NZ131]
gi|209540021|gb|ACI60597.1| GTP-binding protein [Streptococcus pyogenes NZ131]
Length = 373
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 116/394 (29%), Positives = 183/394 (46%), Gaps = 49/394 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG +QT + + G+ KK + + C RC L H + IT V
Sbjct: 6 CIGCGIHIQTEDKEKAGFTPAAAL---KKGMETGELYCQRCFRLRHYNEITDV------- 55
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ DE L + AL+V ++DI DFNGS + + N ++LV K D+
Sbjct: 56 ----HITDDEFLRLLHEVGDSDALVVNVIDIFDFNGSIIPGLSRFISGNDVLLVGNKKDI 111
Query: 221 LPKGTDFNCVGDWVVE-ATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILG 279
LPK V W+ E A + +L L V LTS+++ I + I + + GRDVY++G
Sbjct: 112 LPKSVKDGKVTQWLTERAHEEGRLRPLDVMLTSAQNKYAIKDLIGRINELRNGRDVYVVG 171
Query: 280 SANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDT 338
NVGKS INA+++++ G +D S PGTTL I+I G ++DT
Sbjct: 172 VTNVGKSTLINAIIQEITGNKDVITT---------SRFPGTTLDKIEI-PLDDGTFIFDT 221
Query: 339 PGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLV 398
PG+ H+ A + ++L ++P+ ++ +++ + E T+F GGL
Sbjct: 222 PGIIHRHQMAHYLSPKELKIVSPKKEIKPKTYQLNPEQ--------------TLFLGGLS 267
Query: 399 RIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDR 458
R D + + F+ L+++ AD FY K +G LTPP K++ + L
Sbjct: 268 RFDFINGERQGFTAFF-DNQLELHRTKLAGADAFYDKHVGTLLTPP-DKKELTAFPKL-- 323
Query: 459 ERLLEIKFEDTERPASDVAISGLGWISVEPVRRS 492
++ E T D+ SGLGWI V + S
Sbjct: 324 -----VRHEFTIDQKMDIVFSGLGWIRVNGQKDS 352
>gi|377809846|ref|YP_005005067.1| ribosome biogenesis GTPase YqeH [Pediococcus claussenii ATCC
BAA-344]
gi|361056587|gb|AEV95391.1| ribosome biogenesis GTPase YqeH [Pediococcus claussenii ATCC
BAA-344]
Length = 371
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 120/387 (31%), Positives = 179/387 (46%), Gaps = 49/387 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QTS D GY P++ +K + + C RC L H + I V
Sbjct: 10 CIGCGAHIQTSNPDELGYT-PES--ALRKGLESGELYCQRCFRLRHYNEIAPVN------ 60
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ R LS + +LIV ++D+ D NGS + + G N ++LV K D+
Sbjct: 61 -----LTDDDFRRLLSQISETDSLIVYVMDLFDVNGSLIPGLHRFIGDNEVLLVGNKEDI 115
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + +W+ + + + V LTS+K+ + + I+K + G+DVY++G
Sbjct: 116 LPKSLKRPRMKEWLRQQAFANGIRPIDVVLTSAKNRHEVNNLFEAIEKYRNGKDVYVVGV 175
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS IN L+ A K S PGTTL I+I F L DTPG
Sbjct: 176 TNVGKSTLINQLI--------AIRNDIKDLITTSRFPGTTLDKIEI-PFDEESSLIDTPG 226
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNG-FTIFWGGLVR 399
+ + A V+ EDL APQ ++ + F LNG T+F G L R
Sbjct: 227 IVHREQMAHVLEPEDLKYAAPQKTIKPRVFQ---------------LNGDQTLFMGALAR 271
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + + Y +L ++ + AD+FY+K G LTPP +
Sbjct: 272 FDYQR--SNGPVVAYFENNLNIHRTKLENADQFYEKHAGELLTPPTNGNFEK------LP 323
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
+L++ F +E+ SD+ GLGWISV
Sbjct: 324 KLIKHNFSVSEK--SDIVFEGLGWISV 348
>gi|294615006|ref|ZP_06694895.1| nitric-oxide synthase [Enterococcus faecium E1636]
gi|291592137|gb|EFF23757.1| nitric-oxide synthase [Enterococcus faecium E1636]
Length = 340
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 111/345 (32%), Positives = 161/345 (46%), Gaps = 38/345 (11%)
Query: 100 SCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGY 159
C GCGA +QT++ GY E K V C RC L H + I V
Sbjct: 6 QCIGCGAVIQTNKPGELGYTPQTALE---KGLASGEVYCQRCFRLRHYNEIQDVS----- 57
Query: 160 AGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVD 219
++ D+ L+ L ++ ALIV +VDI DFNGS + + G NP++LV KVD
Sbjct: 58 ------LTDDDFLRLLNELGQKDALIVNVVDIFDFNGSLIPGLHRFVGDNPVLLVGNKVD 111
Query: 220 LLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILG 279
+LPK + W+ E + + + V LTS+K + + +I++ + GRDVYI+G
Sbjct: 112 ILPKSLKKTKLTQWMKERAYEAGIRPVDVLLTSAKKSHEMTELLEKIEEYRDGRDVYIVG 171
Query: 280 SANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS IN ++K +Q PGTTL I+I G L DTP
Sbjct: 172 VTNVGKSTLINQIIKNTAGVQDVITTSQ--------FPGTTLDKIEI-PLDDGHFLIDTP 222
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ H+ A + +DL +AP ++ + + + NE G T+F GGL R
Sbjct: 223 GIIHRHQMAHYLGKKDLRIIAPLKEIKPKVYQL-------NE-------GQTLFLGGLAR 268
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPP 444
D + Y + ++ +KADEFYQK +G L PP
Sbjct: 269 FDFISG-NRASFIAYVSNDVNIHRTKLEKADEFYQKHVGGLLQPP 312
>gi|66812700|ref|XP_640529.1| hypothetical protein DDB_G0281603 [Dictyostelium discoideum AX4]
gi|60468560|gb|EAL66563.1| hypothetical protein DDB_G0281603 [Dictyostelium discoideum AX4]
Length = 650
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 116/421 (27%), Positives = 190/421 (45%), Gaps = 93/421 (22%)
Query: 89 DKVLKVNSA-VASCYGCGAPLQTSESDAPGYVDPDTYELK----------KKHHQFKTV- 136
DK+L ++ + C GCG+ LQT PGY+ P++ +K +K K +
Sbjct: 113 DKILNLDKVKLPRCTGCGSTLQTKSPKEPGYL-PESIAIKHIEQLNEEKIEKIENSKPIE 171
Query: 137 ------------------------LCGRCRLLSHGHMITAVGGNGGYAGGKQFVSADELR 172
+C RC +L + + V + ++ +
Sbjct: 172 EQDKSGEEYFNSFYIIKKKNNEKKVCQRCHILKNYGRVAPVA-----------IPIEKFK 220
Query: 173 EKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDLLPKGTDFNCVGD 232
+ LS L+ L+VK+VD++DFNG+F+ R++ G NP+I+V K+DLLP + +
Sbjct: 221 DNLSQLKDLNCLVVKVVDLMDFNGTFIEDFREIIGRNPVIVVGNKMDLLPDDIHKDRIEQ 280
Query: 233 WVVEATTKKKLNVLS-VHLTSSKSLAGIVGVASEIQKEKKGRDVYILGSANVGKSAFINA 291
W+ K+ LN +S V L SS S G+ E++K +K RDV+I+G +NVGKS F+N
Sbjct: 281 WIRTEAKKRGLNHISHVKLISSASGDGMKQFIIELEKLRKSRDVFIVGCSNVGKSTFVNT 340
Query: 292 LLKKMGER---------------DPAAAMAQK-------YRPIQSAV-----PGTTLGPI 324
L+K+ R +P QK + +QS + PGTTL +
Sbjct: 341 LIKEYNNRVEFTTNEKLESKKQSEPLTIQEQKDLDREKLLKSLQSKITTSVLPGTTLNLL 400
Query: 325 QIDAFLGGGKLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKS 384
+ L+DTPG+ + + ++L + P R++ Q +
Sbjct: 401 SL-PLWDNSTLFDTPGIDNPRQMIKNLTIDELKQVIPSKRIKPQL--------------A 445
Query: 385 HGLNGFTIFWGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPP 444
H + G ++F GGLVRID P + Y S+ +++ T KA+ ++ G LTPP
Sbjct: 446 HMIEGKSLFIGGLVRIDYDG--PLSTFMIYTSNSIPLHITSTQKANFILKRHQGSFLTPP 503
Query: 445 I 445
I
Sbjct: 504 I 504
>gi|312871750|ref|ZP_07731838.1| ribosome biogenesis GTPase YqeH [Lactobacillus iners LEAF 3008A-a]
gi|329920071|ref|ZP_08276902.1| ribosome biogenesis GTPase YqeH [Lactobacillus iners SPIN 1401G]
gi|311092692|gb|EFQ51048.1| ribosome biogenesis GTPase YqeH [Lactobacillus iners LEAF 3008A-a]
gi|328936525|gb|EGG32969.1| ribosome biogenesis GTPase YqeH [Lactobacillus iners SPIN 1401G]
Length = 370
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 119/386 (30%), Positives = 176/386 (45%), Gaps = 46/386 (11%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG+ LQ +S GY+ P + K +V C RC L H + IT V N
Sbjct: 8 CIGCGSILQDKDSKLSGYM-PHSAFNKMIQEPDTSVYCQRCFRLRHYNEITPVNENN--- 63
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
D+ L+ L +KALIV +VD+ DFN S +A + G N +LV KVDL
Sbjct: 64 --------DDFLRLLNSLGNKKALIVNVVDLFDFNNSLIASLDRFIGDNEFVLVGNKVDL 115
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
PK + + + DW+ + + L + L S+ I + + + + K D+Y +G+
Sbjct: 116 FPKNSKESKIKDWMRQEANRNGLFPKKIFLLSAIKKRNIDELINYLATKGKNEDIYFVGT 175
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS INA+++ E K S PGTTL I+I G L DTPG
Sbjct: 176 TNVGKSTLINAIIETRSE--------YKNLITTSKFPGTTLDSIKI-PLNEGHYLVDTPG 226
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ + A+ + +L +AP+ +L+ ++ + L G TIF GL RI
Sbjct: 227 ILSKKQMASRLTGSELELVAPKKQLKPATYQL--------------LPGQTIFLAGLGRI 272
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D +K P + T Y + L ++ T ADEFY K L PP KG
Sbjct: 273 DFIKG-PASGFTIYVARDLYLHRTKTINADEFYLKHKSDLLNPPCDSDDLGALKGQ---- 327
Query: 461 LLEIKFEDTERPASDVAISGLGWISV 486
+ +E+ SD+ G+G+I+V
Sbjct: 328 ----LYSTSEK--SDILFGGVGFITV 347
>gi|406670355|ref|ZP_11077607.1| ribosome biogenesis GTPase YqeH [Facklamia ignava CCUG 37419]
gi|405579662|gb|EKB53757.1| ribosome biogenesis GTPase YqeH [Facklamia ignava CCUG 37419]
Length = 369
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 118/398 (29%), Positives = 185/398 (46%), Gaps = 59/398 (14%)
Query: 94 VNSAVASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAV 153
+ + V C GCGA +QT + + GY+ L K Q ++ C RC L H + + +
Sbjct: 1 MTNEVYQCIGCGATIQTEDPEGLGYLPASA--LAKGLVQ-ESFYCQRCYRLRHYNELIDL 57
Query: 154 GGNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIIL 213
+ D ++LS + + A ++ +VD+ D GS ++ I+ L G P +
Sbjct: 58 A-----------LDEDLFLQRLSSIASDDAFVILVVDVFDVEGSIISGIQRLIGEQPFAV 106
Query: 214 VVTKVDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGR 273
V K DLLPK T + V +WV + L SV +T+ +GI + I++ +
Sbjct: 107 AVNKFDLLPKVTRQSKVKEWVRQIMNSNHLYPESVIITNGMKRSGIEALVELIEQYIHSK 166
Query: 274 DVYILGSANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGG 332
++YI+G NVGKS IN L++ GER+ S PGTTL IQI
Sbjct: 167 NIYIVGITNVGKSTLINQLIQHYGGEREIITT---------SNHPGTTLDMIQI-PLTDE 216
Query: 333 GKLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTI 392
L DTPG+ + A + ++L + P L+ +++ + SE T+
Sbjct: 217 HSLIDTPGIIKKSQYAHYLSRDELKEVLPSKPLKPKTYQLKSEQ--------------TL 262
Query: 393 FWGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQ---- 448
F GGL RID+ + +T Y SL ++ T+KA +FY+K LG L PP K+
Sbjct: 263 FLGGLARIDVKTQADKAAVTLYVNSSLYIHRTKTEKASDFYEKHLGELLNPPHQKEDFPE 322
Query: 449 -KAEGWKGLDRERLLEIKFEDTERPASDVAISGLGWIS 485
KA+ ++ +E D+ ISGLGWI+
Sbjct: 323 LKAQSYRLSGKE---------------DLNISGLGWIT 345
>gi|167756987|ref|ZP_02429114.1| hypothetical protein CLORAM_02536 [Clostridium ramosum DSM 1402]
gi|237732927|ref|ZP_04563408.1| conserved hypothetical protein [Mollicutes bacterium D7]
gi|365833456|ref|ZP_09374972.1| ribosome biogenesis GTPase YqeH [Coprobacillus sp. 3_3_56FAA]
gi|374625564|ref|ZP_09697980.1| ribosome biogenesis GTPase YqeH [Coprobacillus sp. 8_2_54BFAA]
gi|167703162|gb|EDS17741.1| ribosome biogenesis GTPase YqeH [Clostridium ramosum DSM 1402]
gi|229383996|gb|EEO34087.1| conserved hypothetical protein [Coprobacillus sp. D7]
gi|365257900|gb|EHM87923.1| ribosome biogenesis GTPase YqeH [Coprobacillus sp. 3_3_56FAA]
gi|373915224|gb|EHQ46995.1| ribosome biogenesis GTPase YqeH [Coprobacillus sp. 8_2_54BFAA]
Length = 365
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 122/428 (28%), Positives = 195/428 (45%), Gaps = 73/428 (17%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C+GCGA +Q+ + G+V + E +LC RC L + H +
Sbjct: 7 CFGCGAIIQSEDEKKIGFVPKNALEKD-------VILCKRCFRLKNYHELQ--------- 50
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
K +++D+ + L + L+V LVD+ D+NGS + + N I+++ K D+
Sbjct: 51 --KTDLTSDDFLKILQEIGNHDCLVVYLVDLFDYNGSLINGLSRHLNNNDILVLGNKRDI 108
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + W+ + + + V L+S + + +I + + GRDVYI+G
Sbjct: 109 LPKSLKDRKIEHWLRRQLKESGIKPIDVILSSGTKNYNLDLLIDKINEYRHGRDVYIVGV 168
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS+ IN+LLK G D S PGTTL I+I LYD+P
Sbjct: 169 TNVGKSSLINSLLKHYAGVTDNLIT--------TSEFPGTTLDLIEI-PLDDKNYLYDSP 219
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ +H+ A +V EDL + P+S LR +F + + T+++GGL R
Sbjct: 220 GIINNHQMAHLVKDEDLRIIIPKSELRPINFQLNDQQ--------------TLYFGGLAR 265
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
+D +K P + T + PK L+++ +D Y + L TL P I E K ++
Sbjct: 266 VDFIKG-PRSSFTCFFPKLLKIHRTKLGNSDNLYNRHL--TLMPEI-----ESIKDIN-- 315
Query: 460 RLLEIKFEDTERPAS--DVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPV 517
E+ D + P D+ ISGLG++SV ++R VH P+ V
Sbjct: 316 ---EMASYDFKLPEGKIDIVISGLGFVSVNCPNANVR----------------VHAPQGV 356
Query: 518 EVFVRNPM 525
VF+R +
Sbjct: 357 GVFIREAL 364
>gi|149002055|ref|ZP_01827009.1| GTP-binding protein [Streptococcus pneumoniae SP14-BS69]
gi|147759864|gb|EDK66854.1| GTP-binding protein [Streptococcus pneumoniae SP14-BS69]
Length = 336
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 109/352 (30%), Positives = 176/352 (50%), Gaps = 45/352 (12%)
Query: 136 VLCGRCRLLSHGHMITAVGGNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFN 195
V C RC L H + IT V ++ D+ + L + AL+V ++DI DFN
Sbjct: 6 VYCQRCFRLRHYNEITDVQ-----------LTNDDFLKLLHEVGDSDALVVNVIDIFDFN 54
Query: 196 GSFLARIRDLAGANPIILVVTKVDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKS 255
GS + + N ++LV K D+LPK + W+++ ++ L + V LTS+++
Sbjct: 55 GSVIPGLPRFVSGNDVLLVGNKKDILPKSVKSGKISQWLMKRAHEEGLRPVDVVLTSAQN 114
Query: 256 LAGIVGVASEIQKEKKGRDVYILGSANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQS 314
I V +I+ +KGRDVY++G NVGKS INA+++++ G+++ S
Sbjct: 115 KHAIKEVIDKIEHYRKGRDVYVVGVTNVGKSTLINAIIQEITGDQNVITT---------S 165
Query: 315 AVPGTTLGPIQIDAFLGGGKLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVIS 374
PGTTL I+I G +YDTPG+ H+ A + A++L ++P+ ++ +++ +
Sbjct: 166 RFPGTTLDKIEI-PLDDGSYIYDTPGIIHRHQMAHYLTAKNLKYVSPKKEIKPKTYQLNP 224
Query: 375 ETETNNEFKSHGLNGFTIFWGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQ 434
E T+F GGL R D + + F+ L+++ + A FY
Sbjct: 225 EQ--------------TLFLGGLGRFDFIAGEKQGFTAFFD-NELKLHRSKLEGASAFYD 269
Query: 435 KELGVTLTPPIGKQKAEGWKGLDRERLLEIKFEDTERPASDVAISGLGWISV 486
K LG LTPP K+K D RL++ F T + +D+ ISGLGWI V
Sbjct: 270 KHLGTLLTPPNSKEKE------DFPRLVQHVF--TIKDKTDLVISGLGWIRV 313
>gi|418126403|ref|ZP_12763308.1| hypothetical protein SPAR86_1773 [Streptococcus pneumoniae GA44511]
gi|353795467|gb|EHD75815.1| hypothetical protein SPAR86_1773 [Streptococcus pneumoniae GA44511]
Length = 336
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 109/352 (30%), Positives = 176/352 (50%), Gaps = 45/352 (12%)
Query: 136 VLCGRCRLLSHGHMITAVGGNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFN 195
V C RC L H + IT V ++ D+ + L + AL+V ++DI DFN
Sbjct: 6 VYCQRCFRLRHYNEITDVQ-----------LTNDDFLKLLHEVGDSDALVVNVIDIFDFN 54
Query: 196 GSFLARIRDLAGANPIILVVTKVDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKS 255
GS + + N ++LV K D+LPK + W+++ ++ L + V LTS+++
Sbjct: 55 GSVIPGLPRFVSGNDVLLVGNKKDILPKSVKSGKISQWLMKRAHEEGLRPVDVVLTSAQN 114
Query: 256 LAGIVGVASEIQKEKKGRDVYILGSANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQS 314
I V +I+ +KGRDVY++G NVGKS INA+++++ G+++ S
Sbjct: 115 KHAIKEVIDKIEHYRKGRDVYVVGVTNVGKSTLINAIIQEITGDQNVITT---------S 165
Query: 315 AVPGTTLGPIQIDAFLGGGKLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVIS 374
PGTTL I+I G +YDTPG+ H+ A + A++L ++P+ ++ +++ +
Sbjct: 166 RFPGTTLDKIEI-PLDDGSYIYDTPGIIHRHQMAHYLTAKNLKYVSPKKEIKPKTYQLNP 224
Query: 375 ETETNNEFKSHGLNGFTIFWGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQ 434
E T+F GGL R D + + F+ L+++ + A FY
Sbjct: 225 EQ--------------TLFLGGLGRFDFIAGEKQGFTAFFD-NELKLHRSKLEGASAFYD 269
Query: 435 KELGVTLTPPIGKQKAEGWKGLDRERLLEIKFEDTERPASDVAISGLGWISV 486
K LG LTPP K+K D RL++ F T + +D+ ISGLGWI V
Sbjct: 270 KHLGTLLTPPNSKEKE------DFPRLVQHVF--TIKDKTDLVISGLGWIRV 313
>gi|417940627|ref|ZP_12583915.1| ribosome biogenesis GTPase YqeH [Streptococcus oralis SK313]
gi|343389508|gb|EGV02093.1| ribosome biogenesis GTPase YqeH [Streptococcus oralis SK313]
Length = 336
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 109/352 (30%), Positives = 176/352 (50%), Gaps = 45/352 (12%)
Query: 136 VLCGRCRLLSHGHMITAVGGNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFN 195
V C RC L H + IT V ++ D+ + L + AL+V ++DI DFN
Sbjct: 6 VYCQRCFRLRHYNEITDVQ-----------LTDDDFLKLLHEVGDSDALVVNVIDIFDFN 54
Query: 196 GSFLARIRDLAGANPIILVVTKVDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKS 255
GS + + N ++LV K D+LPK + W++E ++ L + V LTS+++
Sbjct: 55 GSVIPGLPRFVSGNDVLLVGNKKDILPKSVKPGKISQWLMERAHEEGLRPVDVVLTSAQN 114
Query: 256 LAGIVGVASEIQKEKKGRDVYILGSANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQS 314
I V +I+ +KGRDVY++G NVGKS INA+++++ G+++ S
Sbjct: 115 KHAIKEVIDKIEHYRKGRDVYVVGVTNVGKSTLINAIIQEITGDQNVITT---------S 165
Query: 315 AVPGTTLGPIQIDAFLGGGKLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVIS 374
PGTTL I+I G +YDTPG+ H+ A + A++L ++P+ ++ +++ +
Sbjct: 166 RFPGTTLDKIEI-PLDDGSYIYDTPGIIHRHQMAHYLTAKNLKYVSPKKEIKPKTYQLNP 224
Query: 375 ETETNNEFKSHGLNGFTIFWGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQ 434
E T+F GGL R D + + F+ L+++ + A FY
Sbjct: 225 EQ--------------TLFLGGLGRFDFISGEKQGFTAFFD-NELKLHRTKLEGASAFYD 269
Query: 435 KELGVTLTPPIGKQKAEGWKGLDRERLLEIKFEDTERPASDVAISGLGWISV 486
K LG LTPP K+K E +L++ F T + +D+ ISGLGWI V
Sbjct: 270 KHLGTLLTPPNSKEKEE------FPKLVQHVF--TIKDKTDLVISGLGWIRV 313
>gi|315645928|ref|ZP_07899049.1| ribosome biogenesis GTPase YqeH [Paenibacillus vortex V453]
gi|315278689|gb|EFU42003.1| ribosome biogenesis GTPase YqeH [Paenibacillus vortex V453]
Length = 374
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 124/439 (28%), Positives = 191/439 (43%), Gaps = 79/439 (17%)
Query: 92 LKVNSAVASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMIT 151
L + C GCG PLQ++ D PGY L +K + V+C RC + + + +
Sbjct: 3 LPTGGDIKKCSGCGIPLQSAAQDKPGY-------LPEKAWDREPVICQRCFRIKNYNEAS 55
Query: 152 AVGGNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPI 211
+V V DE L + + AL++ +VD+ DF GS ++ ++ G NP+
Sbjct: 56 SVT-----------VDQDEFLRLLGQIGGKNALVIHIVDLFDFEGSLISGLQRFVGNNPV 104
Query: 212 ILVVTKVDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKK 271
+L V K DLLPK T++N V +WV + + L + L S+K G + + + +
Sbjct: 105 VLAVNKTDLLPKVTNWNKVLNWVQKQCKEHGLRTEDIVLCSAKKNQGFERLLEMVGQHRG 164
Query: 272 GRDVYILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLG 331
RDVY++G+ NVGKS+ IN L++ + D + S PGTTL + I
Sbjct: 165 DRDVYVVGATNVGKSSLINRLIRDYSDLDQELTV--------SRYPGTTLDMVNI-PLDD 215
Query: 332 GGKLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLR--------GQSFAVISETETNNEFK 383
G + DTPG+ R + VV EDL + P++ L+ GQ+ +
Sbjct: 216 GRYIIDTPGIVYPWRYSEVVSREDLGTVMPENPLKPMVYQLNEGQTLFFGGFGRFDFLQG 275
Query: 384 SHGLNGFTIFWGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTP 443
H FT F G L ++ ++AD +++ G L+P
Sbjct: 276 EH--QSFTCFISG---------------------RLGIHRTKLERADSLFEEHAGELLSP 312
Query: 444 PIGKQKAEGWKGLDRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLEST 503
P K++ E R EI+ R DV ISGLGWI +
Sbjct: 313 PT-KERLEELPEWTRH---EIRIPKGTR--QDVFISGLGWIKI--------------NGE 352
Query: 504 SGELHLAVHVPKPVEVFVR 522
G L +AVH PK ++V R
Sbjct: 353 QGAL-VAVHAPKGIKVLSR 370
>gi|418165043|ref|ZP_12801711.1| GTPase family protein [Streptococcus pneumoniae GA17371]
gi|353828875|gb|EHE09011.1| GTPase family protein [Streptococcus pneumoniae GA17371]
Length = 336
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 109/352 (30%), Positives = 176/352 (50%), Gaps = 45/352 (12%)
Query: 136 VLCGRCRLLSHGHMITAVGGNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFN 195
V C RC L H + IT V ++ D+ + L + AL+V ++DI DFN
Sbjct: 6 VYCQRCFRLRHYNEITDVQ-----------LTNDDFLKLLHEVGDSDALVVNVIDIFDFN 54
Query: 196 GSFLARIRDLAGANPIILVVTKVDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKS 255
GS + + N ++LV K D+LPK + W+++ ++ L + V LTS+++
Sbjct: 55 GSVIPGLPRFVSGNDVLLVGNKKDILPKSVKSGKISQWLMKRAHEEGLRPVDVVLTSAQN 114
Query: 256 LAGIVGVASEIQKEKKGRDVYILGSANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQS 314
I V +I+ +KGRDVY++G NVGKS INA+++++ G+++ S
Sbjct: 115 KHAIKEVIDKIEHYRKGRDVYVVGVTNVGKSTLINAIIQEITGDQNVITT---------S 165
Query: 315 AVPGTTLGPIQIDAFLGGGKLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVIS 374
PGTTL I+I G +YDTPG+ H+ A + A++L ++P+ ++ +++ +
Sbjct: 166 RFPGTTLDKIEI-PLDDGSYIYDTPGIIHRHQMAHYLTAKNLKYVSPKKEIKPKTYQLNP 224
Query: 375 ETETNNEFKSHGLNGFTIFWGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQ 434
E T+F GGL R D + + F+ L+++ + A FY
Sbjct: 225 EQ--------------TLFLGGLGRFDFIAGEKQGFTAFFD-NELKLHRSKLEGASAFYD 269
Query: 435 KELGVTLTPPIGKQKAEGWKGLDRERLLEIKFEDTERPASDVAISGLGWISV 486
K LG LTPP K+K D RL++ F T + +D+ ISGLGWI V
Sbjct: 270 KHLGTLLTPPNSKEKE------DFPRLVQHVF--TIKDKTDLVISGLGWIRV 313
>gi|259500527|ref|ZP_05743429.1| GTP-binding protein [Lactobacillus iners DSM 13335]
gi|302191217|ref|ZP_07267471.1| GTP-binding protein YqeH [Lactobacillus iners AB-1]
gi|325912153|ref|ZP_08174551.1| ribosome biogenesis GTPase YqeH [Lactobacillus iners UPII 143-D]
gi|259167911|gb|EEW52406.1| GTP-binding protein [Lactobacillus iners DSM 13335]
gi|325476103|gb|EGC79271.1| ribosome biogenesis GTPase YqeH [Lactobacillus iners UPII 143-D]
Length = 370
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 118/386 (30%), Positives = 175/386 (45%), Gaps = 46/386 (11%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG+ LQ +S GY+ P + K +V C RC L H + IT V N
Sbjct: 8 CIGCGSILQDKDSKLSGYM-PHSAFNKMIQEPDTSVYCQRCFRLRHYNEITPVNENN--- 63
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
D+ L+ L +KALIV +VD+ DFN S + + G N +LV KVDL
Sbjct: 64 --------DDFLRLLNSLGNKKALIVNVVDLFDFNNSLITSLDRFIGDNEFVLVGNKVDL 115
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
PK + + + DW+ + + L + L S+ I + + + + K D+Y +G+
Sbjct: 116 FPKNSKESKIKDWMRQEANRNGLFPKKIFLLSAIKKRNIDELINYLATKGKNEDIYFVGT 175
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS INA+++ E K S PGTTL I+I G L DTPG
Sbjct: 176 TNVGKSTLINAIIETRSE--------YKNLITTSKFPGTTLDSIKI-PLNEGHYLVDTPG 226
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ + A+ + +L +AP+ +L+ ++ + L G TIF GL RI
Sbjct: 227 ILSKKQMASRLTGSELELVAPKKQLKPATYQL--------------LPGQTIFLAGLGRI 272
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D +K P + T Y + L ++ T ADEFY K L PP KG
Sbjct: 273 DFIKG-PASGFTIYVARDLYLHRTKTINADEFYLKHKSDLLNPPCDNDDLGALKGQ---- 327
Query: 461 LLEIKFEDTERPASDVAISGLGWISV 486
+ +E+ SD+ G+G+I+V
Sbjct: 328 ----LYSTSEK--SDILFGGVGFITV 347
>gi|315653638|ref|ZP_07906558.1| GTP-binding protein [Lactobacillus iners ATCC 55195]
gi|315489000|gb|EFU78642.1| GTP-binding protein [Lactobacillus iners ATCC 55195]
Length = 370
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 118/386 (30%), Positives = 175/386 (45%), Gaps = 46/386 (11%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG+ LQ +S GY+ P + K +V C RC L H + IT V N
Sbjct: 8 CIGCGSILQDKDSKLSGYM-PHSAFNKMIQEPDTSVYCQRCFRLRHYNEITPVNENN--- 63
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
D+ L+ L +KALIV +VD+ DFN S + + G N +LV KVDL
Sbjct: 64 --------DDFLRLLNSLGNKKALIVNVVDLFDFNNSLITSLDRFIGNNEFVLVGNKVDL 115
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
PK + + + DW+ + + L + L S+ I + + + + K D+Y +G+
Sbjct: 116 FPKNSKESKIKDWMRQEANRNGLFPKKIFLLSAIKKRNIDELINYLATKGKNEDIYFVGT 175
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS INA+++ E K S PGTTL I+I G L DTPG
Sbjct: 176 TNVGKSTLINAIIETRSE--------YKNLITTSKFPGTTLDSIKI-PLNEGHYLVDTPG 226
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ + A+ + +L +AP+ +L+ ++ + L G TIF GL RI
Sbjct: 227 ILSKKQMASRLTGSELELVAPKKQLKPATYQL--------------LPGQTIFLAGLGRI 272
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D +K P + T Y + L ++ T ADEFY K L PP KG
Sbjct: 273 DFIKG-PASGFTIYVARDLYLHRTKTINADEFYLKHKSDLLNPPCDSDDLGALKGQ---- 327
Query: 461 LLEIKFEDTERPASDVAISGLGWISV 486
+ +E+ SD+ G+G+I+V
Sbjct: 328 ----LYSTSEK--SDILFGGVGFITV 347
>gi|261405558|ref|YP_003241799.1| ribosome biogenesis GTPase YqeH [Paenibacillus sp. Y412MC10]
gi|261282021|gb|ACX63992.1| ribosome biogenesis GTPase YqeH [Paenibacillus sp. Y412MC10]
Length = 375
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 124/433 (28%), Positives = 188/433 (43%), Gaps = 79/433 (18%)
Query: 98 VASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNG 157
+ C GCG PLQ++ D PGY L +K V+C RC + + + ++V
Sbjct: 10 IKKCSGCGIPLQSAAQDKPGY-------LPEKAWDRDPVICQRCFRIKNYNEASSVA--- 59
Query: 158 GYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTK 217
V DE L + + AL++ +VD+ DF GS ++ ++ G NP+IL V K
Sbjct: 60 --------VDQDEFLRLLGQIGGKNALVIHIVDLFDFEGSLISGLQRFVGNNPVILAVNK 111
Query: 218 VDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYI 277
DLLPK T++N V +WV + + L + L S+K G + + + RDVY+
Sbjct: 112 TDLLPKVTNWNKVLNWVQKQCKEHGLRTEDIVLCSAKKNQGFERLLETVAHYRGDRDVYV 171
Query: 278 LGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYD 337
+G+ NVGKS+ IN L++ + D + S PGTTL + I G + D
Sbjct: 172 VGATNVGKSSLINRLIRDYSDLDQELTV--------SRYPGTTLDMVNI-PLDDGRYIID 222
Query: 338 TPGVHLHHRQAAVVHAEDLPALAPQSRLR--------GQSFAVISETETNNEFKSHGLNG 389
TPG+ R + +V EDL + P++ L+ GQ+ + H
Sbjct: 223 TPGIVYPWRYSELVSREDLGTVMPENPLKPMVYQLNEGQTLFFGGFGRFDFLQGEH--QS 280
Query: 390 FTIFWGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQK 449
FT F G L ++ ++AD + + G L+PP K++
Sbjct: 281 FTCFISG---------------------RLGIHRTKLERADSLFAEHAGELLSPPT-KER 318
Query: 450 AEGWKGLDRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHL 509
E R EI+ R DV ISGLGWI + G L +
Sbjct: 319 LEELPEWTRH---EIRIPKGAR--QDVFISGLGWIKI--------------NGEQGAL-V 358
Query: 510 AVHVPKPVEVFVR 522
AVHVPK ++V R
Sbjct: 359 AVHVPKGIKVLSR 371
>gi|309807137|ref|ZP_07701114.1| ribosome biogenesis GTPase YqeH [Lactobacillus iners LactinV
03V1-b]
gi|308166488|gb|EFO68690.1| ribosome biogenesis GTPase YqeH [Lactobacillus iners LactinV
03V1-b]
Length = 370
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 119/386 (30%), Positives = 177/386 (45%), Gaps = 46/386 (11%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG+ LQ +S GY+ P + K +V C RC L H + IT V N
Sbjct: 8 CIGCGSILQDKDSKLSGYM-PHSAFNKMIQEPDTSVYCQRCFRLRHYNEITPVNENN--- 63
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
D+ L+ L +KALIV +VD+ DFN S + + G N +LV KVDL
Sbjct: 64 --------DDFLRLLNSLGNKKALIVNVVDLFDFNNSLITSLDRFIGDNEFVLVGNKVDL 115
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
PK + + + DW+ + + L + L S+ I + + + + K D+Y +G+
Sbjct: 116 FPKNSKESKIKDWMRQEANRNGLFPKKIFLLSAIKKRNIDELINYLATKGKNEDIYFVGT 175
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS INA+++ E K S PGTTL I+I G L DTPG
Sbjct: 176 TNVGKSTLINAIIETRSE--------YKNLITTSKFPGTTLDSIKI-PLNEGHYLVDTPG 226
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ + A+ + +L +AP+ +L+ ++ + L G TIF GL RI
Sbjct: 227 ILSKKQMASRLTGSELELVAPKKQLKPATYQL--------------LPGQTIFLAGLGRI 272
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D +K P + T Y + L ++ T ADEFY K L PP KG
Sbjct: 273 DFIKG-PASGFTIYVARDLYLHRTKTINADEFYLKHKSDLLNPPCDSDDLGALKG----- 326
Query: 461 LLEIKFEDTERPASDVAISGLGWISV 486
+I + +E+ SD+ G+G+I+V
Sbjct: 327 --QI-YSTSEK--SDILFGGVGFITV 347
>gi|222097780|ref|YP_002531837.1| GTP-binding protein yqeh [Bacillus cereus Q1]
gi|221241838|gb|ACM14548.1| GTP-binding protein [Bacillus cereus Q1]
Length = 347
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 116/393 (29%), Positives = 176/393 (44%), Gaps = 63/393 (16%)
Query: 136 VLCGRCRLLSHGHMITAVGGNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFN 195
V+C RC L H + I V ++ D+ L+ + + AL+VK+VDI DFN
Sbjct: 14 VICQRCFRLKHYNEIQDVS-----------LTDDDFLRILNGIGKSDALVVKIVDIFDFN 62
Query: 196 GSFLARIRDLAGANPIILVVTKVDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKS 255
GS+L + G N ++LV K DL+PK + V W+ + + L V L S+
Sbjct: 63 GSWLPGLHRFVGNNKVLLVGNKADLIPKSVKHDKVKHWMRYSAKQLGLKPEDVFLISAAK 122
Query: 256 LAGIVGVASEIQKEKKGRDVYILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSA 315
GI +A I+ + G+DVY++G NVGKS FIN ++K+ + +
Sbjct: 123 GQGIAELADAIEYYRGGKDVYVVGCTNVGKSTFINRMIKEFSDETENVITTSHF------ 176
Query: 316 VPGTTLGPIQIDAFLGGGKLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISE 375
PGTTL I I LYDTPG+ HH+ A V + L + P ++ F + E
Sbjct: 177 -PGTTLDLIDI-PLDEESSLYDTPGIINHHQMAHYVGKQSLKLITPTKEIKPMVFQLNEE 234
Query: 376 TETNNEFKSHGLNGFTIFWGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQK 435
T+F+ GL R D + T + L ++ +KADE Y+
Sbjct: 235 Q--------------TLFFSGLARFDYVSG-GRRAFTCHFSNRLTIHRTKLEKADELYKN 279
Query: 436 ELGVTLTPPIGKQKAEGWKGLDRERLLE-IKFE-DTERPASDVAISGLGWISV-EPVRRS 492
G L+PP ++ E + E +K+E + P +DV SGLGW++V EP +
Sbjct: 280 HAGDLLSPPTPEE---------LENMPELVKYEFNIREPKTDVVFSGLGWVTVNEPGAK- 329
Query: 493 IRNSDINLESTSGELHLAVHVPKPVEVFVRNPM 525
+ HVPK V V +R +
Sbjct: 330 ----------------IVAHVPKGVSVSLRKSL 346
>gi|309810198|ref|ZP_07704043.1| ribosome biogenesis GTPase YqeH [Lactobacillus iners SPIN
2503V10-D]
gi|312872993|ref|ZP_07733053.1| ribosome biogenesis GTPase YqeH [Lactobacillus iners LEAF 2062A-h1]
gi|312874210|ref|ZP_07734244.1| ribosome biogenesis GTPase YqeH [Lactobacillus iners LEAF 2052A-d]
gi|312875587|ref|ZP_07735588.1| ribosome biogenesis GTPase YqeH [Lactobacillus iners LEAF 2053A-b]
gi|325912587|ref|ZP_08174970.1| ribosome biogenesis GTPase YqeH [Lactobacillus iners UPII 60-B]
gi|308169470|gb|EFO71518.1| ribosome biogenesis GTPase YqeH [Lactobacillus iners SPIN
2503V10-D]
gi|311088841|gb|EFQ47284.1| ribosome biogenesis GTPase YqeH [Lactobacillus iners LEAF 2053A-b]
gi|311090280|gb|EFQ48690.1| ribosome biogenesis GTPase YqeH [Lactobacillus iners LEAF 2052A-d]
gi|311091515|gb|EFQ49899.1| ribosome biogenesis GTPase YqeH [Lactobacillus iners LEAF 2062A-h1]
gi|325478008|gb|EGC81137.1| ribosome biogenesis GTPase YqeH [Lactobacillus iners UPII 60-B]
Length = 370
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 119/386 (30%), Positives = 177/386 (45%), Gaps = 46/386 (11%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG+ LQ +S GY+ P + K +V C RC L H + IT V N
Sbjct: 8 CIGCGSILQDKDSKLSGYM-PHSAFNKMIQEPDTSVYCQRCFRLRHYNEITPVNENN--- 63
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
D+ L+ L +KALIV +VD+ DFN S + + G N +LV KVDL
Sbjct: 64 --------DDFLRLLNSLGNKKALIVNVVDLFDFNNSLITSLDRFIGDNEFVLVGNKVDL 115
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
PK + + + DW+ + + L + L S+ I + + + + K D+Y +G+
Sbjct: 116 FPKNSKESKIKDWMRQEANRNGLFPKKIFLLSAIKKRNIDELINYLATKGKNEDIYFVGT 175
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS INA+++ E K S PGTTL I+I G L DTPG
Sbjct: 176 TNVGKSTLINAIIETRSE--------YKNLITTSKFPGTTLDSIKI-PLNEGHYLVDTPG 226
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ + A+ + +L +AP+ +L+ ++ + L G TIF GL RI
Sbjct: 227 ILSKKQMASRLTGSELELVAPKKQLKPATYQL--------------LPGQTIFLAGLGRI 272
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D +K P + T Y + L ++ T ADEFY K L PP KG
Sbjct: 273 DFIKG-PASGFTIYVARDLYLHRTKTINADEFYLKHKSDLLNPPCDSDDLGALKG----- 326
Query: 461 LLEIKFEDTERPASDVAISGLGWISV 486
+I + +E+ SD+ G+G+I+V
Sbjct: 327 --QI-YSTSEK--SDILFGGVGFITV 347
>gi|254736440|ref|ZP_05194146.1| GTP-binding protein YqeH [Bacillus anthracis str. Western North
America USA6153]
Length = 364
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 104/344 (30%), Positives = 156/344 (45%), Gaps = 41/344 (11%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG +QT + + GY + E ++ V+C RC L H + I V
Sbjct: 7 CIGCGVEIQTEDKNEVGYAPASSLEKEQ-------VICQRCFRLKHYNEIQDVS------ 53
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ L+ + + AL+VK+VDI DFNGS+L + G N ++LV K DL
Sbjct: 54 -----LTDDDFLRILNGIGKSDALVVKIVDIFDFNGSWLPGLHRFVGNNKVLLVGNKADL 108
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
+PK + V W+ + + L V L S+ GI +A I+ + G+DVY++G
Sbjct: 109 IPKSVKHDKVKHWMRYSAKQLGLKPEDVFLISAAKGQGIAELADAIEYYRGGKDVYVVGC 168
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS FIN ++K+ + S PGTTL I I LYDTPG
Sbjct: 169 TNVGKSTFINRMIKEFSDETENVITT-------SHFPGTTLDLIDI-PLDEESSLYDTPG 220
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ HH+ A V + L + P ++ F + E T+F+ GL R
Sbjct: 221 IINHHQMAHYVGKQSLKLITPTKEIKPMVFQLNEEQ--------------TLFFSGLARF 266
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPP 444
D + T + L ++ +KADE Y+ G L+PP
Sbjct: 267 DYVSG-GRRAFTCHFSNRLTIHRTKLEKADELYKNHAGDLLSPP 309
>gi|313884889|ref|ZP_07818641.1| ribosome biogenesis GTPase YqeH [Eremococcus coleocola
ACS-139-V-Col8]
gi|312619580|gb|EFR31017.1| ribosome biogenesis GTPase YqeH [Eremococcus coleocola
ACS-139-V-Col8]
Length = 375
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 116/388 (29%), Positives = 171/388 (44%), Gaps = 49/388 (12%)
Query: 100 SCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGY 159
C GCGA +QT + PGY YE +F C RC L H + I
Sbjct: 13 QCIGCGAYIQTDHPELPGYTPQSAYEKGLTKGEF---YCQRCFRLRHYNEIQNFD----- 64
Query: 160 AGGKQFVSADELREKLSHL-RREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKV 218
VS E+L + + E+A + LVDI D GS L + G P ILV K+
Sbjct: 65 ------VSEYFFLEQLDKIGQDEEAFVFHLVDIFDLEGSLLTGLNRFTGNKPFILVANKI 118
Query: 219 DLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYIL 278
DLLPK + W+ + L V L S+K A + + IQ + + ++Y +
Sbjct: 119 DLLPKSVKLGRIQSWLTQRFHALDLYPQDVILLSAKKGASLDQLIEVIQDKIQNHNIYTV 178
Query: 279 GSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDT 338
G NVGKS+ IN +LK +GE D SA+PGTTL I++ L DT
Sbjct: 179 GVTNVGKSSVINHVLKDLGEADNLITT--------SAMPGTTLEFIEL-PLTEDHALIDT 229
Query: 339 PGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLV 398
PG+ + + E + + P ++ +SF + S G TIF+ GL
Sbjct: 230 PGIIRSQQITHYLDREGIKVVLPDKMIKPRSFQLDS--------------GQTIFFAGLG 275
Query: 399 RIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDR 458
R+D + +T TFY +L ++ T+KAD+ G L+PP K + +K
Sbjct: 276 RLDFERG-DKTSFTFYVSNNLLLHRTKTEKADQLLADHQGQLLSPPQAKDQLPAFK---- 330
Query: 459 ERLLEIKFEDTERPASDVAISGLGWISV 486
+ + D+AI+GLGW++V
Sbjct: 331 ------TYHIQLQANQDLAIAGLGWVTV 352
>gi|125623108|ref|YP_001031591.1| GTP-binding protein YqeH [Lactococcus lactis subsp. cremoris
MG1363]
gi|124491916|emb|CAL96837.1| conserved hypothetical protein [Lactococcus lactis subsp. cremoris
MG1363]
Length = 381
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 116/403 (28%), Positives = 181/403 (44%), Gaps = 65/403 (16%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKK-KHHQFKTV----------------LCGRCRL 143
C GCGA +QT + +A G++ + KK + Q + V C RC
Sbjct: 3 CIGCGAKIQTEDKNALGFLPAGALKKKKAERDQMEAVQAGDEGSEAFVKNEDLYCQRCFR 62
Query: 144 LSHGHMITAVGGNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIR 203
L H + I AD LR L + + ALIV +VDI DFNGS + +
Sbjct: 63 LRHYNEIAPT----------SLTDADFLR-LLKEIGQHNALIVNVVDIFDFNGSLIPNLH 111
Query: 204 DLAGANPIILVVTKVDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVA 263
L G N +++V K D+LPK + W+ E + L + +TS+++ + +
Sbjct: 112 KLTGGNDLLMVANKRDVLPKSLKVGKMTAWLREQAASRGLKPKDILITSAQNKDDVAELM 171
Query: 264 SEIQKEKKGRDVYILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGP 323
I+ ++GRDVY++G NVGKS INA++K +A + S PGTTL
Sbjct: 172 EAIEHYRRGRDVYVVGVTNVGKSTLINAIIK--------SASGSEDVITTSRFPGTTLDK 223
Query: 324 IQIDAFLGGGKLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFK 383
I+I L DTPG+ + A + EDL ++P+ + +++ + E
Sbjct: 224 IEI-PLDEDSALIDTPGIIHRGQMAHYLEPEDLKYVSPRKEINPKTYQLNPEQ------- 275
Query: 384 SHGLNGFTIFWGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTP 443
T+F+GGL R D + +T Y + V+ + A EFY+K G L P
Sbjct: 276 -------TLFFGGLARFDFISG-ERQGMTAYFDNEINVHRTKLEGATEFYEKHKGELLAP 327
Query: 444 PIGKQKAEGWKGLDRERLLEIKFEDTERPASDVAISGLGWISV 486
+ K L+ +F+ T++ SD+ SGLGW+ V
Sbjct: 328 ALVGAK-----------LVRREFKITDK--SDIVFSGLGWVRV 357
>gi|389853433|ref|YP_006355677.1| GTP-binding protein YqeH [Lactococcus lactis subsp. cremoris
NZ9000]
gi|300069855|gb|ADJ59255.1| GTP-binding protein YqeH [Lactococcus lactis subsp. cremoris
NZ9000]
Length = 401
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 116/403 (28%), Positives = 181/403 (44%), Gaps = 65/403 (16%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKK-KHHQFKTV----------------LCGRCRL 143
C GCGA +QT + +A G++ + KK + Q + V C RC
Sbjct: 23 CIGCGAKIQTEDKNALGFLPAGALKKKKAERDQMEAVQAGDEGSEAFVKNEDLYCQRCFR 82
Query: 144 LSHGHMITAVGGNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIR 203
L H + I AD LR L + + ALIV +VDI DFNGS + +
Sbjct: 83 LRHYNEIAPT----------SLTDADFLR-LLKEIGQHNALIVNVVDIFDFNGSLIPNLH 131
Query: 204 DLAGANPIILVVTKVDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVA 263
L G N +++V K D+LPK + W+ E + L + +TS+++ + +
Sbjct: 132 KLTGGNDLLMVANKRDVLPKSLKVGKMTAWLREQAASRGLKPKDILITSAQNKDDVAELM 191
Query: 264 SEIQKEKKGRDVYILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGP 323
I+ ++GRDVY++G NVGKS INA++K +A + S PGTTL
Sbjct: 192 EAIEHYRRGRDVYVVGVTNVGKSTLINAIIK--------SASGSEDVITTSRFPGTTLDK 243
Query: 324 IQIDAFLGGGKLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFK 383
I+I L DTPG+ + A + EDL ++P+ + +++ + E
Sbjct: 244 IEI-PLDEDSALIDTPGIIHRGQMAHYLEPEDLKYVSPRKEINPKTYQLNPEQ------- 295
Query: 384 SHGLNGFTIFWGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTP 443
T+F+GGL R D + +T Y + V+ + A EFY+K G L P
Sbjct: 296 -------TLFFGGLARFDFISG-ERQGMTAYFDNEINVHRTKLEGATEFYEKHKGELLAP 347
Query: 444 PIGKQKAEGWKGLDRERLLEIKFEDTERPASDVAISGLGWISV 486
+ K L+ +F+ T++ SD+ SGLGW+ V
Sbjct: 348 ALVGAK-----------LVRREFKITDK--SDIVFSGLGWVRV 377
>gi|330794402|ref|XP_003285268.1| hypothetical protein DICPUDRAFT_149114 [Dictyostelium purpureum]
gi|325084810|gb|EGC38230.1| hypothetical protein DICPUDRAFT_149114 [Dictyostelium purpureum]
Length = 750
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 107/368 (29%), Positives = 177/368 (48%), Gaps = 56/368 (15%)
Query: 137 LCGRCRLLSHGHMITAVGGNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNG 196
+C RC LL + + V + ++ R+ LS ++ +IVK+VD++DF+G
Sbjct: 227 ICQRCHLLKNYGRVAPVS-----------IPIEKFRKNLSKIKELNCVIVKVVDLMDFHG 275
Query: 197 SFLARIRDLAGANPIILVVTKVDLLPKGTDFNCVGDWVVEATTKKKLNVLS-VHLTSSKS 255
SF+ RD+ G NP+I+V K+DLLP + + +W+ + L LS V L SS +
Sbjct: 276 SFIEDFRDIVGNNPVIIVGNKMDLLPSDIHKDRIENWITSEAKARGLAHLSHVLLLSSTN 335
Query: 256 LAGIVGVASEIQKEKKGRDVYILGSANVGKSAFINALLKKMGER--------------DP 301
GI E++K ++GRDV++LG +NVGKS F+N+L+ + +
Sbjct: 336 KDGIKQFIIELEKIRRGRDVFVLGCSNVGKSTFVNSLVDEYNSKVEFVKSDDQKEDKKKK 395
Query: 302 AAAMAQK-------YRPIQSAV-----PGTTLGPIQIDAFLGGGKLYDTPGVHLHHRQAA 349
+ QK R IQS + PGTTL + + L+DTPG+ +
Sbjct: 396 LSIQEQKELEREKLLRSIQSKITTSILPGTTLNLLSL-PLWKDSTLFDTPGIDNPKQMLK 454
Query: 350 VVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRIDLLKVLPET 409
++ ++L + P R++ H ++G T+F GGLVRID P +
Sbjct: 455 LLSLKELRQVLPTKRIKPTLV--------------HLIDGKTLFIGGLVRIDYTG--PLS 498
Query: 410 CLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPI-GKQKAEGWKGLDRERLLEIKFED 468
Y S+ +++ T KAD+ ++K+ G LTPPI K + EI+FE+
Sbjct: 499 TFLVYTSNSIPLHLTSTKKADKLFKKQQGRLLTPPILSNIKVNKEDNSTQIEAKEIEFEN 558
Query: 469 TERPASDV 476
+ +S++
Sbjct: 559 QNKISSEI 566
>gi|253574707|ref|ZP_04852047.1| ribosome biogenesis GTPase YqeH [Paenibacillus sp. oral taxon 786
str. D14]
gi|251845753|gb|EES73761.1| ribosome biogenesis GTPase YqeH [Paenibacillus sp. oral taxon 786
str. D14]
Length = 375
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 130/422 (30%), Positives = 202/422 (47%), Gaps = 63/422 (14%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA LQT +S PGYV P+ K+ V+C RC + + + ++V
Sbjct: 13 CSGCGAVLQTQDSSKPGYV-PEQALSKEP------VICQRCFRIKNYNESSSVT------ 59
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
V DE LS + ++AL++ +VD+ DF+GS + ++ G NP++L V K DL
Sbjct: 60 -----VEQDEFLRLLSQIGSKEALVIHIVDLFDFHGSVITGLQRFVGNNPVLLAVNKTDL 114
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK T++N V +WV + L + V L S+K +G + + + RDVY++G+
Sbjct: 115 LPKVTNWNKVRNWVQKEAKDLGLKIEDVVLCSAKQNSGFDRLLDAVAARRGDRDVYVVGA 174
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS IN L++ + D + S PGTTL + I G + DTPG
Sbjct: 175 TNVGKSTLINRLIRDYSDLDQELTV--------SRYPGTTLDMVHI-PLDDGRAIIDTPG 225
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ R + +V DL + P L+ + + NE G T+F+GG R
Sbjct: 226 IVYPSRYSELVAPSDLGVIMPDKPLKPAVYQL-------NE-------GQTLFFGGFGRF 271
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D ++ ++ F + + ++ +ADE + + G L+PP K+ E R
Sbjct: 272 DFIQGERQSFTCFVNIR-VPIHRTKLARADELFTEHAGELLSPP-SKEHIEALPEWTRH- 328
Query: 461 LLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVEVF 520
+F + SDV ISGLGWI + N+D +G + +A+HVPK V+V
Sbjct: 329 ----EFRIPKGSRSDVFISGLGWIKI--------NND------AGAV-VAMHVPKGVKVL 369
Query: 521 VR 522
VR
Sbjct: 370 VR 371
>gi|333397000|ref|ZP_08478813.1| GTPase YqeH [Leuconostoc gelidum KCTC 3527]
gi|406600387|ref|YP_006745733.1| GTPase YqeH [Leuconostoc gelidum JB7]
gi|406371922|gb|AFS40847.1| GTPase YqeH [Leuconostoc gelidum JB7]
Length = 382
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 118/388 (30%), Positives = 183/388 (47%), Gaps = 51/388 (13%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +Q +S GY+ KK + +LC RC L H + I V
Sbjct: 21 CIGCGAVMQVIDSSKAGYLPMSAL---KKSINSEELLCQRCFRLRHYNEIQPVE------ 71
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGA-NPIILVVTKVD 219
++ D+ L + KALIV ++D+ D GS +A + G NPI++V KVD
Sbjct: 72 -----LTDDDFSRLLHQISDAKALIVYVIDVFDVTGSEIAGLPRFVGQDNPILVVANKVD 126
Query: 220 LLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILG 279
LLPK + N + +W+ + + + + LTS+ + + I ++GRDVY++G
Sbjct: 127 LLPKLLNKNRLKNWLQAELKAQGIKPVDIFLTSATHPQNLDDLLDTIDNHREGRDVYVVG 186
Query: 280 SANVGKSAFINALLKK-MGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDT 338
NVGKS IN ++K G +D S PGTTL I+I G +L DT
Sbjct: 187 VTNVGKSTLINQIIKSGTGVQDLITT---------SRFPGTTLDRIEI-PLADGKQLIDT 236
Query: 339 PGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLV 398
PG+ + V+ +DL P++ ++ +++ + +E TIF GGL
Sbjct: 237 PGIVKRDQITHVLADKDLKYALPKNEIKPRTYQLNAEQ--------------TIFIGGLA 282
Query: 399 RIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDR 458
R D ++ + +T Y +L ++ AD+FY K G LTP Q+A
Sbjct: 283 RFD-FELGERSPITAYFENNLSLHRTKLIGADDFYDKHAGELLTP--SPQEAT------M 333
Query: 459 ERLLEIKFEDTERPASDVAISGLGWISV 486
L+ +F TE+ SD+ +GLGWIS+
Sbjct: 334 TNLIRHEFNITEK--SDIVFAGLGWISI 359
>gi|385829792|ref|YP_005867605.1| GTP-binding protein [Lactococcus lactis subsp. lactis CV56]
gi|418037128|ref|ZP_12675517.1| hypothetical protein LLCRE1631_00324 [Lactococcus lactis subsp.
cremoris CNCM I-1631]
gi|326405800|gb|ADZ62871.1| GTP-binding protein [Lactococcus lactis subsp. lactis CV56]
gi|354695007|gb|EHE94635.1| hypothetical protein LLCRE1631_00324 [Lactococcus lactis subsp.
cremoris CNCM I-1631]
Length = 401
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 120/405 (29%), Positives = 183/405 (45%), Gaps = 69/405 (17%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKK---HHQFKTV----------------LCGRC 141
C GCGA +QT + +A G++ LKKK Q + V C RC
Sbjct: 23 CIGCGAKIQTEDKNALGFLPAGA--LKKKIAERDQMEAVQAGDEGSEASIKTEDLYCQRC 80
Query: 142 RLLSHGHMITAVGGNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLAR 201
L H + I AD LR L + + ALIV +VDI DFNGS +
Sbjct: 81 FRLRHYNEIAPT----------SLTDADFLR-LLKEIGQHDALIVNVVDIFDFNGSLIPN 129
Query: 202 IRDLAGANPIILVVTKVDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVG 261
+ L G N +++V K D+LPK + W+ E + L + +TS+++ +
Sbjct: 130 LHKLTGGNDLLMVANKRDVLPKSLKVGKLTAWLREQAASRSLKPKDILVTSAQNKDDVAE 189
Query: 262 VASEIQKEKKGRDVYILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTL 321
+ I+ ++GRDVY++G NVGKS INA++K +A + S PGTTL
Sbjct: 190 LMETIEYYRRGRDVYVVGVTNVGKSTLINAIIK--------SASGSEDVITTSRFPGTTL 241
Query: 322 GPIQIDAFLGGGKLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNE 381
I+I L DTPG+ + A + EDL ++P+ ++ +++ + E
Sbjct: 242 NKIEI-PLDEDSALIDTPGIIHRGQMAHYLEPEDLKYVSPRKEIKPKTYQLNPEQ----- 295
Query: 382 FKSHGLNGFTIFWGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTL 441
T+F+GGL R D + +T Y + V+ + A EFY+K G L
Sbjct: 296 ---------TLFFGGLARFDFISG-ERQGMTAYFDNEINVHRTKLEGATEFYEKHKGELL 345
Query: 442 TPPIGKQKAEGWKGLDRERLLEIKFEDTERPASDVAISGLGWISV 486
P + G K + RE F+ T++ SD+ SGLGW+ V
Sbjct: 346 APAL-----VGAKLVRRE------FKITDK--SDIVFSGLGWVRV 377
>gi|451343499|ref|ZP_21912571.1| ribosome biogenesis GTPase YqeH [Eggerthia catenaformis OT 569 =
DSM 20559]
gi|449337862|gb|EMD17018.1| ribosome biogenesis GTPase YqeH [Eggerthia catenaformis OT 569 =
DSM 20559]
Length = 359
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 125/431 (29%), Positives = 192/431 (44%), Gaps = 84/431 (19%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
CYGCGA +QT+ PGY L +K + VLC RC L H H A
Sbjct: 6 CYGCGAIIQTNSPKEPGY-------LPEKAFNNERVLCQRCFKLMHYHTKIETS-----A 53
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
FV LS + ++ AL+V +VD+ D GS + G N ++++ K D+
Sbjct: 54 ESIDFVKI------LSQIGQKDALVVYIVDLFDLYGSMIPGFMRHVGFNDVLVLANKRDV 107
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + + +V K+ + L V +TS+K + I + +KGRDVY+ G+
Sbjct: 108 LPKSLKDDKLERYVRRQLKKESIKPLDVIITSAKKNYNYDLIYESINELRKGRDVYVTGT 167
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS+FIN LLK G + S PGTTLG I+I +YDTPG
Sbjct: 168 TNVGKSSFINGLLKHYGGIKGFITV--------SEFPGTTLGMIKI-PLDENSAIYDTPG 218
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ +H+ + V +DL + PQS +R +F + + N+ T+++G L R+
Sbjct: 219 IINNHQMTSRVTHKDLVKIIPQSEIRPVTFQL-----SGNQ---------TLYFGALARL 264
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D L + T Y K+L ++ + AD Y + + + + G+D
Sbjct: 265 DYLG--DKGSFTCYFSKNLPIHRTKLENADNLYNRHMELKI-------------GIDIS- 308
Query: 461 LLEIKFEDTE------RPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVP 514
K ED E + ++ ISGLG+ISV + + +HVP
Sbjct: 309 ----KIEDFETISYMVKEPCEIVISGLGFISVNALGI-----------------IKIHVP 347
Query: 515 KPVEVFVRNPM 525
++V +R M
Sbjct: 348 VGIDVIMRERM 358
>gi|385837239|ref|YP_005874869.1| GTP-binding protein YqeH [Lactococcus lactis subsp. cremoris A76]
gi|414073525|ref|YP_006998742.1| GTP-binding protein YqeH [Lactococcus lactis subsp. cremoris
UC509.9]
gi|358748467|gb|AEU39446.1| GTP-binding protein YqeH [Lactococcus lactis subsp. cremoris A76]
gi|413973445|gb|AFW90909.1| GTP-binding protein YqeH [Lactococcus lactis subsp. cremoris
UC509.9]
Length = 391
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 118/405 (29%), Positives = 182/405 (44%), Gaps = 69/405 (17%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKK---HHQFKTV----------------LCGRC 141
C GCGA +QT + +A G++ LKKK Q + V C RC
Sbjct: 13 CIGCGAKIQTEDKNALGFLPAGA--LKKKIAERDQMEAVQAGDEGSEASIKTEDLYCQRC 70
Query: 142 RLLSHGHMITAVGGNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLAR 201
L H + I AD LR L + + ALIV +VDI DFNGS +
Sbjct: 71 FRLRHYNEIAPT----------SLTDADFLR-LLKEIGQHDALIVNVVDIFDFNGSLIPN 119
Query: 202 IRDLAGANPIILVVTKVDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVG 261
+ L G N +++V K D+LPK + W+ E + L + +TS+++ +
Sbjct: 120 LHKLTGGNDLLMVANKRDVLPKSLKVGKLTAWLREQAASRSLKPKDILVTSAQNKDDVAE 179
Query: 262 VASEIQKEKKGRDVYILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTL 321
+ I+ ++GRDVY++G NVGKS INA++K +A + S PGTTL
Sbjct: 180 LMEAIEYYRRGRDVYVVGVTNVGKSTLINAIIK--------SASGSEDVITTSRFPGTTL 231
Query: 322 GPIQIDAFLGGGKLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNE 381
I+I L DTPG+ + A + EDL ++P+ ++ +++ + E
Sbjct: 232 DKIEI-PLDEDSALIDTPGIIHRGQMAHYLEPEDLKYVSPRKEIKPKTYQLNPEQ----- 285
Query: 382 FKSHGLNGFTIFWGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTL 441
T+F+GGL R D + +T Y + V+ + A EFY+K G L
Sbjct: 286 ---------TLFFGGLARFDFISG-ERQGMTAYFDNEINVHRTKLEGATEFYEKHKGELL 335
Query: 442 TPPIGKQKAEGWKGLDRERLLEIKFEDTERPASDVAISGLGWISV 486
P + K L+ +F+ T++ SD+ SGLGW+ V
Sbjct: 336 APALVGAK-----------LVRREFKITDK--SDIVFSGLGWVRV 367
>gi|374672293|dbj|BAL50184.1| GTP-binding protein [Lactococcus lactis subsp. lactis IO-1]
Length = 401
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 120/405 (29%), Positives = 183/405 (45%), Gaps = 69/405 (17%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKK---HHQFKTV----------------LCGRC 141
C GCGA +QT + +A G++ LKKK Q + V C RC
Sbjct: 23 CIGCGAKIQTEDKNALGFLPAGA--LKKKIAERDQMEAVQAGDEGSEASIKTEDLYCQRC 80
Query: 142 RLLSHGHMITAVGGNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLAR 201
L H + I AD LR L + + ALIV +VDI DFNGS +
Sbjct: 81 FRLRHYNEIAPT----------SLTDADFLR-LLKEIGQHDALIVNVVDIFDFNGSLIPN 129
Query: 202 IRDLAGANPIILVVTKVDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVG 261
+ L G N +++V K D+LPK + W+ E + L + +TS+++ +
Sbjct: 130 LHKLTGGNDLLMVANKRDVLPKSLKVGKLTAWLREQAASRSLKPKDILVTSAQNKDDVAE 189
Query: 262 VASEIQKEKKGRDVYILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTL 321
+ I+ ++GRDVY++G NVGKS INA++K +A + S PGTTL
Sbjct: 190 LMEAIEYYRRGRDVYVVGVTNVGKSTLINAIIK--------SASGSEDVITTSRFPGTTL 241
Query: 322 GPIQIDAFLGGGKLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNE 381
I+I L DTPG+ + A + EDL ++P+ ++ +++ + E
Sbjct: 242 DKIEI-PLDEDSALIDTPGIIHRGQMAHYLEPEDLKYVSPRKEIKPKTYQLNPEQ----- 295
Query: 382 FKSHGLNGFTIFWGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTL 441
T+F+GGL R D + +T Y + V+ + A EFY+K G L
Sbjct: 296 ---------TLFFGGLARFDFISG-ERQGMTAYFDNEINVHRTKLEGATEFYEKHKGELL 345
Query: 442 TPPIGKQKAEGWKGLDRERLLEIKFEDTERPASDVAISGLGWISV 486
P + G K + RE F+ T++ SD+ SGLGW+ V
Sbjct: 346 APAL-----VGAKLVRRE------FKITDK--SDIVFSGLGWVRV 377
>gi|281490709|ref|YP_003352689.1| GTP-binding protein [Lactococcus lactis subsp. lactis KF147]
gi|281374478|gb|ADA63999.1| GTP-binding protein [Lactococcus lactis subsp. lactis KF147]
Length = 401
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 120/405 (29%), Positives = 183/405 (45%), Gaps = 69/405 (17%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKK---HHQFKTV----------------LCGRC 141
C GCGA +QT + +A G++ LKKK Q + V C RC
Sbjct: 23 CIGCGAKIQTEDKNALGFLPAGA--LKKKIAERDQMEAVQAGDEGSEASIKTEDLYCQRC 80
Query: 142 RLLSHGHMITAVGGNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLAR 201
L H + I AD LR L + + ALIV +VDI DFNGS +
Sbjct: 81 FRLRHYNEIAPT----------SLTDADFLR-LLKEIGQHDALIVNVVDIFDFNGSLIPN 129
Query: 202 IRDLAGANPIILVVTKVDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVG 261
+ L G N +++V K D+LPK + W+ E + L + +TS+++ +
Sbjct: 130 LHKLTGGNDLLMVANKRDVLPKSLKVGKLTAWLREQAASRSLKPKDILVTSAQNKDDVAE 189
Query: 262 VASEIQKEKKGRDVYILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTL 321
+ I+ ++GRDVY++G NVGKS INA++K +A + S PGTTL
Sbjct: 190 LMEAIEYYRRGRDVYVVGVTNVGKSTLINAIIK--------SASGSEDVITTSRFPGTTL 241
Query: 322 GPIQIDAFLGGGKLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNE 381
I+I L DTPG+ + A + EDL ++P+ ++ +++ + E
Sbjct: 242 DKIEI-PLDEDSALIDTPGIIHRGQMAHYLEPEDLKYVSPRKEIKPKTYQLNPEQ----- 295
Query: 382 FKSHGLNGFTIFWGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTL 441
T+F+GGL R D + +T Y + V+ + A EFY+K G L
Sbjct: 296 ---------TLFFGGLARFDFISG-ERQGMTAYFDNEINVHRTKLEGATEFYEKHKGELL 345
Query: 442 TPPIGKQKAEGWKGLDRERLLEIKFEDTERPASDVAISGLGWISV 486
P + G K + RE F+ T++ SD+ SGLGW+ V
Sbjct: 346 APAL-----VGAKLVRRE------FKITDK--SDIVFSGLGWVRV 377
>gi|116511050|ref|YP_808266.1| GTP-binding protein YqeH [Lactococcus lactis subsp. cremoris SK11]
gi|116106704|gb|ABJ71844.1| Predicted GTPase [Lactococcus lactis subsp. cremoris SK11]
Length = 401
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 118/405 (29%), Positives = 182/405 (44%), Gaps = 69/405 (17%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKK---HHQFKTV----------------LCGRC 141
C GCGA +QT + +A G++ LKKK Q + V C RC
Sbjct: 23 CIGCGAKIQTEDKNALGFLPAGA--LKKKIAERDQMEAVQAGDEGSEAFVKNEDLYCQRC 80
Query: 142 RLLSHGHMITAVGGNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLAR 201
L H + I AD LR L + + ALIV +VDI DFNGS +
Sbjct: 81 FRLRHYNEIAPT----------SLTDADFLR-LLKEIGQHNALIVNVVDIFDFNGSLIPN 129
Query: 202 IRDLAGANPIILVVTKVDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVG 261
+ L G N +++V K D+LPK + W+ E + L + +TS+++ +
Sbjct: 130 LHKLTGGNDLLMVANKRDVLPKSLKVGKMTAWLREQAASRGLKPKDILVTSAQNKDDVAE 189
Query: 262 VASEIQKEKKGRDVYILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTL 321
+ I+ ++GRDVY++G NVGKS INA++K +A + S PGTTL
Sbjct: 190 LMEAIEHYRRGRDVYVVGVTNVGKSTLINAIIK--------SASGSEDVITTSRFPGTTL 241
Query: 322 GPIQIDAFLGGGKLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNE 381
I+I L DTPG+ + A + EDL ++P+ ++ +++ + E
Sbjct: 242 DKIEI-PLDEDSALIDTPGIIHRGQMAHYLEPEDLKYVSPRKEIKPKTYQLNPEQ----- 295
Query: 382 FKSHGLNGFTIFWGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTL 441
T+F+GGL R D + +T Y + V+ + A EFY+K G L
Sbjct: 296 ---------TLFFGGLARFDFISG-ERQGMTAYFDNEINVHRTKLEGATEFYEKHKGELL 345
Query: 442 TPPIGKQKAEGWKGLDRERLLEIKFEDTERPASDVAISGLGWISV 486
P + K L+ +F+ T++ SD+ SGLGW+ V
Sbjct: 346 APALVGAK-----------LVRREFKITDK--SDIVFSGLGWVRV 377
>gi|293374269|ref|ZP_06620597.1| ribosome biogenesis GTPase YqeH [Turicibacter sanguinis PC909]
gi|325844831|ref|ZP_08168283.1| ribosome biogenesis GTPase YqeH [Turicibacter sp. HGF1]
gi|292647102|gb|EFF65084.1| ribosome biogenesis GTPase YqeH [Turicibacter sanguinis PC909]
gi|325489018|gb|EGC91406.1| ribosome biogenesis GTPase YqeH [Turicibacter sp. HGF1]
Length = 369
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 117/424 (27%), Positives = 189/424 (44%), Gaps = 66/424 (15%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT GY + + K ++ + C RC L H + + V
Sbjct: 6 CIGCGATIQTENPKEIGYTPASS--ISKMENEI--IYCQRCFKLKHYNEVQDVA------ 55
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
+++D+ + L + AL++ +VDI DF+GS +A + N I+LV KVDL
Sbjct: 56 -----LTSDDFLKILQRVGETDALVINIVDIFDFSGSMVAGLSRHINGNDILLVGNKVDL 110
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + + W+ + + L L V L S+ GI + I+K +KGRDVYI+G
Sbjct: 111 LPKSVNKTKLNHWMRRSLKEYGLKPLDVALVSAGKGFGIDELMEMIEKYRKGRDVYIVGC 170
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS +N ++K+ E + PGTTL I+I + DTPG
Sbjct: 171 TNVGKSTLVNRIIKRFTEEREDIITTSHF-------PGTTLDIIEI-PLDDCSAIVDTPG 222
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ H+ A V + L + P+ ++ + + +E T+F GGL R+
Sbjct: 223 IINEHQLAHYVTPKVLKEITPKKEIKAGVYQLNAEQ--------------TLFVGGLARM 268
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D +K + +T + L ++ +KAD + + G L P +D ++
Sbjct: 269 DFVKGERTSFVTHFA-NQLHIHRTKLEKADHLWATQAGAVLKPV----------AMDNDQ 317
Query: 461 LLEIKFEDTE--RPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVE 518
L+E++ +D+ ISGLGW ++ S DIN ++ PK V
Sbjct: 318 LMEMEKHTFHIGHEKTDLVISGLGWFTL-----SGTGQDIN-----------IYAPKGVG 361
Query: 519 VFVR 522
V +R
Sbjct: 362 VMIR 365
>gi|300173713|ref|YP_003772879.1| GTP-binding protein yqeH [Leuconostoc gasicomitatum LMG 18811]
gi|333447983|ref|ZP_08482925.1| GTPase YqeH [Leuconostoc inhae KCTC 3774]
gi|299888092|emb|CBL92060.1| GTP-binding protein yqeH [Leuconostoc gasicomitatum LMG 18811]
Length = 382
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 117/388 (30%), Positives = 181/388 (46%), Gaps = 51/388 (13%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +Q +S GY+ KK + +LC RC L H + I V
Sbjct: 21 CIGCGAVMQVVDSSKAGYLPMSAL---KKSIDSEELLCQRCFKLRHYNEIQPVE------ 71
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGA-NPIILVVTKVD 219
++ D+ L + KALIV ++D+ D GS +A + G NPI++V KVD
Sbjct: 72 -----LTDDDFSRLLHQISDAKALIVYVIDVFDVTGSEIAGLPRFVGQDNPILVVANKVD 126
Query: 220 LLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILG 279
LLPK + N + +W+ + + + + LTS+ + + I ++GRDVY++G
Sbjct: 127 LLPKLLNKNRLKNWLQVELKAQGIKPVDIFLTSATHPKNLDDLLDTIDNYREGRDVYVVG 186
Query: 280 SANVGKSAFINALLKK-MGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDT 338
NVGKS IN ++K G +D S PGTTL I+I G +L DT
Sbjct: 187 VTNVGKSTLINQIIKSGTGVQDLITT---------SRFPGTTLDRIEI-PLADGRQLIDT 236
Query: 339 PGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLV 398
PG+ + V+ +DL P++ ++ +++ + +E TIF GGL
Sbjct: 237 PGIVKRDQITHVLADKDLKYALPKNEIKPRTYQLNAEQ--------------TIFIGGLA 282
Query: 399 RIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDR 458
R D ++ T +T Y +L ++ AD+FY K G LTP +
Sbjct: 283 RFD-FELGERTPITAYFENNLSLHRTKLIGADDFYDKHAGELLTPSPQESTITN------ 335
Query: 459 ERLLEIKFEDTERPASDVAISGLGWISV 486
L+ +F TE+ SD+ +GLGWIS+
Sbjct: 336 --LIRHEFNITEK--SDIVFAGLGWISI 359
>gi|15672203|ref|NP_266377.1| GTP-binding protein YqeH [Lactococcus lactis subsp. lactis Il1403]
gi|12723078|gb|AAK04319.1|AE006260_2 GTP-binding protein [Lactococcus lactis subsp. lactis Il1403]
Length = 381
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 118/405 (29%), Positives = 181/405 (44%), Gaps = 69/405 (17%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKK---HHQFKTV----------------LCGRC 141
C GCGA +QT +A G++ LKKK Q + V C RC
Sbjct: 3 CIGCGAKIQTEAKNALGFLPAGA--LKKKIAERDQMEAVQAGDEGSEASIKTEDLYCQRC 60
Query: 142 RLLSHGHMITAVGGNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLAR 201
L H + I AD LR L + + ALIV +VDI DFNGS +
Sbjct: 61 FRLRHYNEIAPT----------SLTDADFLR-LLKEIGQHDALIVNVVDIFDFNGSLIPN 109
Query: 202 IRDLAGANPIILVVTKVDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVG 261
+ L G N +++V K D+LPK + W+ E + L + +TS+++ +
Sbjct: 110 LHKLTGGNDLLMVANKRDVLPKSLKVGKLTAWLREQAASRSLKPKDILVTSAQNKDDVAE 169
Query: 262 VASEIQKEKKGRDVYILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTL 321
+ I+ ++GRDVY++G NVGKS INA++K +A + S PGTTL
Sbjct: 170 LMEAIEYYRRGRDVYVVGVTNVGKSTLINAIIK--------SASGSEDVITTSRFPGTTL 221
Query: 322 GPIQIDAFLGGGKLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNE 381
I+I L DTPG+ + A + EDL ++P+ ++ +++ + E
Sbjct: 222 DKIEI-PLDEDSALIDTPGIIHRGQIAHYLEPEDLKYVSPRKEIKPKTYQLDPEQ----- 275
Query: 382 FKSHGLNGFTIFWGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTL 441
T+F+GGL R D + +T Y + V+ + A EFY+K G L
Sbjct: 276 ---------TLFFGGLARFDFISG-ERQGMTAYFDNEINVHRTKLEGATEFYEKHKGELL 325
Query: 442 TPPIGKQKAEGWKGLDRERLLEIKFEDTERPASDVAISGLGWISV 486
P + K L+ +F+ T++ SD+ SGLGW+ V
Sbjct: 326 APALVGAK-----------LVRREFKITDK--SDIVFSGLGWVRV 357
>gi|170016751|ref|YP_001727670.1| GTP-binding protein YqeH [Leuconostoc citreum KM20]
gi|414596537|ref|ZP_11446111.1| GTP-binding protein yqeH [Leuconostoc citreum LBAE E16]
gi|169803608|gb|ACA82226.1| Predicted GTPase [Leuconostoc citreum KM20]
gi|390482558|emb|CCF28172.1| GTP-binding protein yqeH [Leuconostoc citreum LBAE E16]
Length = 381
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 113/388 (29%), Positives = 184/388 (47%), Gaps = 51/388 (13%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +Q ++++ GY+ KK +LC RC L H + I V
Sbjct: 20 CIGCGALMQVTDANKSGYLPMSAL---KKTIDSDELLCQRCFRLRHYNEIQPVE------ 70
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGA-NPIILVVTKVD 219
++ D+ L + KALIV ++D+ D GS ++ + G NPI++V KVD
Sbjct: 71 -----LTDDDFATLLHQISETKALIVYVIDVFDVTGSEISGLPRFVGQDNPILVVANKVD 125
Query: 220 LLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILG 279
LLPK + N + +W+ + + + LTS+ + + ++ ++GRDVY++G
Sbjct: 126 LLPKLLNKNRLKNWLQAELKAQGIQPADIFLTSATKPQNLDDLLDKVDTLRQGRDVYVVG 185
Query: 280 SANVGKSAFINALLK-KMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDT 338
NVGKS IN ++K + G D S PGTTL I+I G L DT
Sbjct: 186 VTNVGKSTLINQIIKSRTGVTDLITT---------SRFPGTTLDRIEI-PLADGQFLIDT 235
Query: 339 PGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLV 398
PG+ + A V+ ++L P++ ++ +++ + E TIF GGL
Sbjct: 236 PGIIKRDQIAHVLDDKNLKYALPKNEIKPRTYQLNPEQ--------------TIFIGGLA 281
Query: 399 RIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDR 458
R D + + +T Y +L ++ AD+FYQK +G LTP + +
Sbjct: 282 RFD-FEAGQRSAVTAYFENNLNLHRTKLLGADDFYQKHVGNLLTPSPTQ--------VTT 332
Query: 459 ERLLEIKFEDTERPASDVAISGLGWISV 486
L++ +F TE+ SD+ +GLGW++V
Sbjct: 333 STLVKHQFHTTEK--SDIVFAGLGWVTV 358
>gi|395243805|ref|ZP_10420784.1| Ribosome biogenesis GTPase YqeH [Lactobacillus hominis CRBIP
24.179]
gi|394483855|emb|CCI81792.1| Ribosome biogenesis GTPase YqeH [Lactobacillus hominis CRBIP
24.179]
Length = 370
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 115/394 (29%), Positives = 176/394 (44%), Gaps = 50/394 (12%)
Query: 94 VNSAVASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAV 153
+N C GCG+ LQ ++ GY+ P + K + + V C RC L H + I V
Sbjct: 1 MNDEELRCIGCGSVLQDTDPKEAGYL-PSSALKKALNDEGSDVYCQRCFRLRHYNEIMPV 59
Query: 154 GGNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIIL 213
N D+ L+ + +KAL+V +VD+ DF+ S ++ ++ G N IL
Sbjct: 60 SENN-----------DDFLALLNSIADKKALVVNVVDLFDFSNSLISSLKRFIGGNEYIL 108
Query: 214 VVTKVDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGR 273
V KVDL PK + + DW+ + + L + L S+ + + + I K+ K +
Sbjct: 109 VGNKVDLFPKNSKETKIKDWMRQEANRNGLKPEKIFLVSAAKKKNLDELINFIAKKGKKK 168
Query: 274 DVYILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGG 333
D+Y +G+ NVGKS INA+L ER + S PGTTL I+I G
Sbjct: 169 DIYFVGTTNVGKSTLINAIL---SERSDLKDLIT-----TSKFPGTTLDEIKI-PLDNGH 219
Query: 334 KLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIF 393
L DTPG+ + A+ + ++L + P+ L+ ++ + L G TIF
Sbjct: 220 YLIDTPGILSKKQLASHLTGKELEVVEPKKPLKPATYQL--------------LPGQTIF 265
Query: 394 WGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGW 453
GL R D + P T Y + L V+ T+ AD+FY+K L PP K
Sbjct: 266 LAGLGRFDYIDG-PSAGFTLYVARDLYVHRTKTENADQFYEKHKKDLLLPPSEKDDLGLL 324
Query: 454 KGLDRERLLEIKFEDTERP--ASDVAISGLGWIS 485
KG T P SD+ G+G+I+
Sbjct: 325 KG------------QTFSPDVKSDILFGGVGFIT 346
>gi|421879139|ref|ZP_16310612.1| GTP-binding protein yqeH [Leuconostoc citreum LBAE C11]
gi|390446938|emb|CCF26732.1| GTP-binding protein yqeH [Leuconostoc citreum LBAE C11]
Length = 381
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 113/388 (29%), Positives = 184/388 (47%), Gaps = 51/388 (13%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +Q ++++ GY+ KK +LC RC L H + I V
Sbjct: 20 CIGCGALMQVTDANKSGYLPMSAL---KKTIDSDELLCQRCFRLRHYNEIQPVE------ 70
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGA-NPIILVVTKVD 219
++ D+ L + KALIV ++D+ D GS ++ + G NPI++V KVD
Sbjct: 71 -----LTDDDFATLLHQISETKALIVYVIDVFDVTGSEISGLPRFVGQDNPILVVANKVD 125
Query: 220 LLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILG 279
LLPK + N + +W+ + + + LTS+ + + ++ ++GRDVY++G
Sbjct: 126 LLPKLLNKNRLKNWLQADLKAQGIQPADIFLTSATKPQNLDDLLDKVDTLRQGRDVYVVG 185
Query: 280 SANVGKSAFINALLK-KMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDT 338
NVGKS IN ++K + G D S PGTTL I+I G L DT
Sbjct: 186 VTNVGKSTLINQIIKSRTGVTDLITT---------SRFPGTTLDRIEI-PLADGQFLIDT 235
Query: 339 PGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLV 398
PG+ + A V+ ++L P++ ++ +++ + E TIF GGL
Sbjct: 236 PGIIKRDQIAHVLDDKNLKYALPKNEIKPRTYQLNPEQ--------------TIFIGGLA 281
Query: 399 RIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDR 458
R D + + +T Y +L ++ AD+FYQK +G LTP + +
Sbjct: 282 RFD-FEAGQRSAVTAYFENNLNLHRTKLLGADDFYQKHVGNLLTPSPTQ--------VTT 332
Query: 459 ERLLEIKFEDTERPASDVAISGLGWISV 486
L++ +F TE+ SD+ +GLGW++V
Sbjct: 333 STLVKHQFHTTEK--SDIVFAGLGWVTV 358
>gi|296111265|ref|YP_003621647.1| hypothetical protein LKI_05685 [Leuconostoc kimchii IMSNU 11154]
gi|339491463|ref|YP_004705968.1| GTPase YqeH [Leuconostoc sp. C2]
gi|295832797|gb|ADG40678.1| hypothetical protein LKI_05685 [Leuconostoc kimchii IMSNU 11154]
gi|338853135|gb|AEJ31345.1| GTPase YqeH [Leuconostoc sp. C2]
Length = 380
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 118/388 (30%), Positives = 182/388 (46%), Gaps = 52/388 (13%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +Q S+ + G++ KK + + C RC L H + I V
Sbjct: 20 CIGCGALMQVSDPEKAGFLPMSAL---KKAIDSEELFCKRCFRLRHYNEIQPV------- 69
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGA-NPIILVVTKVD 219
+ AD + L + +ALIV ++DI D GS ++ + G NPI++V KVD
Sbjct: 70 ---ELTDAD-FAKLLHQISDTRALIVYVIDIFDVTGSEISGLPRFVGQDNPILVVANKVD 125
Query: 220 LLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILG 279
LLPK + N + +W+ + + + + LTS++ + + I ++GRDVY++G
Sbjct: 126 LLPKLLNKNRLKNWLQAELKMQGIKPIDIFLTSAQRPQNLDNLLDTIDYFREGRDVYVVG 185
Query: 280 SANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS IN ++K A + S PGTTL I+I G KL DTP
Sbjct: 186 VTNVGKSTLINQIIK--------AGTGVQDLITTSRFPGTTLDRIEI-PLADGKKLIDTP 236
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ + A V+ +DL P++ ++ +++ + SE TIF GGL R
Sbjct: 237 GIIKRDQMAHVLADKDLKFALPKNEIKPRTYQLNSEQ--------------TIFIGGLAR 282
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTP-PIGKQKAEGWKGLDR 458
D ++ T +T Y +L ++ AD+FY K G L P P G
Sbjct: 283 FD-FELGQRTAVTAYFENNLNLHRTKLLGADDFYDKHAGGLLAPSPHGTTT--------- 332
Query: 459 ERLLEIKFEDTERPASDVAISGLGWISV 486
L++ +F TE SD+ +GLGWIS+
Sbjct: 333 -DLVKHEFSITED--SDIVFAGLGWISI 357
>gi|228910174|ref|ZP_04073993.1| hypothetical protein bthur0013_43220 [Bacillus thuringiensis IBL
200]
gi|228849457|gb|EEM94292.1| hypothetical protein bthur0013_43220 [Bacillus thuringiensis IBL
200]
Length = 318
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 101/335 (30%), Positives = 151/335 (45%), Gaps = 41/335 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG +QT + GY + E ++ V+C RC L H + I V
Sbjct: 7 CIGCGVEIQTENKNEVGYAPTSSLEKEQ-------VICQRCFRLKHYNEIQDVS------ 53
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ L+ + + AL+VK+VDI DFNGS+L + G N ++LV K DL
Sbjct: 54 -----LTDDDFLRILNGIGKSDALVVKIVDIFDFNGSWLPGLHRFVGNNKVLLVGNKADL 108
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
+PK + V W+ + + L V L S+ GI +A I+ + G+DVY++G
Sbjct: 109 IPKSVKHDKVKHWMRYSAKQLGLKPEDVFLISAAKGQGIAELADAIEYYRGGKDVYVVGC 168
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS FIN ++K+ + S PGTTL I I LYDTPG
Sbjct: 169 TNVGKSTFINRMIKEFSDETENVITT-------SHFPGTTLDLIDI-PLDEESSLYDTPG 220
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ HH+ A V + L + P ++ F + E T+F+ GL R
Sbjct: 221 IINHHQMAHYVGKQSLKLITPTKEIKPMVFQLNEEQ--------------TLFFSGLARF 266
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQK 435
D + T + L ++ +KADE Y+K
Sbjct: 267 DYVSG-GRRAFTCHFSNRLTIHRTKLEKADELYKK 300
>gi|326693253|ref|ZP_08230258.1| GTPase YqeH [Leuconostoc argentinum KCTC 3773]
Length = 379
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 114/388 (29%), Positives = 179/388 (46%), Gaps = 53/388 (13%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +Q + + GY+ KK +LC RC L H + I V
Sbjct: 20 CIGCGALIQVDDPNKSGYLPMSAL---KKAIDRDELLCQRCFRLRHYNEIQPVE------ 70
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGA-NPIILVVTKVD 219
++ D+ L + +ALIV ++D+ D GS ++ + G NPI++V KVD
Sbjct: 71 -----LTDDDFASLLHQISDTRALIVYVIDVFDVTGSEISSLPRFVGQDNPILVVANKVD 125
Query: 220 LLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILG 279
LLPK + N + +W+ + + + + LTS+ + + +EI + + GRDV+++G
Sbjct: 126 LLPKLLNKNRLKNWLQAELKAQGIKPVDIFLTSATHPQNLDALLAEIDELRAGRDVFVVG 185
Query: 280 SANVGKSAFINALLK-KMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDT 338
NVGKS IN ++K G +D S PGTTL I+I G L DT
Sbjct: 186 VTNVGKSTLINQIIKTSTGVKDLITT---------SRFPGTTLDRIEI-PLSDGKHLIDT 235
Query: 339 PGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLV 398
PG+ + A V+ +DL P++ ++ +++ + E T+F GGL
Sbjct: 236 PGIIKRDQIAHVLSDKDLKYALPKNEIKPRTYQLNPEQ--------------TLFIGGLA 281
Query: 399 RIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDR 458
R D + T Y +L ++ AD FY+K +G LTP
Sbjct: 282 RFD-FESGERASFTAYFENNLNLHRTKLAGADAFYEKHVGTLLTPAPKTATP-------- 332
Query: 459 ERLLEIKFEDTERPASDVAISGLGWISV 486
L++ F+ TE+ SD+ +GLGWISV
Sbjct: 333 --LVKHTFKTTEK--SDIVFAGLGWISV 356
>gi|116618829|ref|YP_819200.1| GTP-binding protein YqeH [Leuconostoc mesenteroides subsp.
mesenteroides ATCC 8293]
gi|381337138|ref|YP_005174913.1| GTPase YqeH [Leuconostoc mesenteroides subsp. mesenteroides J18]
gi|116097676|gb|ABJ62827.1| Predicted GTPase [Leuconostoc mesenteroides subsp. mesenteroides
ATCC 8293]
gi|356645104|gb|AET30947.1| GTPase YqeH [Leuconostoc mesenteroides subsp. mesenteroides J18]
Length = 379
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 114/388 (29%), Positives = 180/388 (46%), Gaps = 53/388 (13%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +Q + D GY+ KK + + C RC L H + I V
Sbjct: 20 CIGCGALMQVEDKDKIGYLPMSAL---KKSISSEELFCQRCFRLRHYNEIQPVE------ 70
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGA-NPIILVVTKVD 219
++ D+ L + KALIV ++D+ D GS ++ + G NPI++V KVD
Sbjct: 71 -----LTDDDFANLLHQISDTKALIVYVIDVFDVTGSAISGLPRFVGKDNPILVVANKVD 125
Query: 220 LLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILG 279
LLPK + N + +W+ + + + V LTS+ + + I + GRDV+++G
Sbjct: 126 LLPKLLNKNRLKNWLRTELKAQGIQPVDVFLTSATRPKNLDDLLDTIDNFRDGRDVFVVG 185
Query: 280 SANVGKSAFINALLK-KMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDT 338
NVGKS IN ++K + G ++ S PGTTL I+I G +L DT
Sbjct: 186 VTNVGKSTLINQIIKSRTGIQNLITT---------SRFPGTTLDRIEI-PLEDGQQLIDT 235
Query: 339 PGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLV 398
PG+ + A V+ +DL P++ ++ +++ + E TIF GGL
Sbjct: 236 PGIIKRDQMAHVLTDKDLKFALPKNEIKPRTYQLNPEQ--------------TIFIGGLA 281
Query: 399 RIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDR 458
R D + + +T Y +L ++ AD+FY++ G L P +
Sbjct: 282 RFDFISG-ARSAITAYFENNLNLHRTKLIGADDFYEQHAGGLLVPAPSQ----------L 330
Query: 459 ERLLEIKFEDTERPASDVAISGLGWISV 486
+ L++ +F TE SD+ SGLGWISV
Sbjct: 331 QNLIKHEFSITE--DSDIVFSGLGWISV 356
>gi|452818888|gb|EME26038.1| GTP-binding protein [Galdieria sulphuraria]
Length = 479
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 129/476 (27%), Positives = 214/476 (44%), Gaps = 103/476 (21%)
Query: 99 ASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRC-RLLSHG---------- 147
+ C GCG LQT++ D+ GYV P+ E K + T LC RC +L+ +G
Sbjct: 39 SRCPGCGCLLQTTDKDSFGYV-PEIVESKAR-----TALCKRCFQLIHYGKLDEKLRLPA 92
Query: 148 ----HMITAVGGNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIR 203
++ AV G G +L+ S L +EK LI+ ++DI D GS + I+
Sbjct: 93 ATMEELVEAVTGTAGIV--------QKLKTLFSSLSKEKFLILLVLDIFDLCGSLFSGIQ 144
Query: 204 DLAGANPIILVVTKVDLLPKGTDFNCVGDWVVEATTKKKL-NVLSVHLTSSKSLAGIVGV 262
+ +I+ V K+DLLP D + ++ + +K L N+ SV S K+ GI +
Sbjct: 145 NCLANADLIICVNKIDLLP-SVDCQKLVPYIKDTMQRKGLENIQSVRFVSCKTGRGIQSL 203
Query: 263 ASEIQKEKKGRDVYILGSANVGKSAFINALLKKMGERD-----------------PAAAM 305
E+ +G+ V+++G ANVGKS+ +N L K+ RD P
Sbjct: 204 RRELLHIPRGKRVFVVGVANVGKSSILNQL--KLSFRDEVKYRSRRELNHKMKKAPKTLT 261
Query: 306 AQKYRPIQ----------SAVPGTTLG--PIQIDAFLGGGKLYDTPGVHLHHRQAAVVHA 353
+ + I+ S VPGTTL P++I G K+YDTPG+ L++ + ++
Sbjct: 262 ESQLKDIEKSAEEVPITTSVVPGTTLEVFPVKIGK---GYKIYDTPGLFLNNHLSHLLST 318
Query: 354 EDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRIDLLKVLPETCLTF 413
E+L + PQ ++ F F+ G +F GGL RI ++ P +
Sbjct: 319 EELKLVIPQKSIKPICF----------RFQ----EGQHLFLGGLARIHFVEGKPFH-VVV 363
Query: 414 YGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGK----QKAEGWKGLDRERLLEIKFEDT 469
Y + +++ +A++F + L PP+ K Q A W+ I+ +
Sbjct: 364 YASSEVSIHISSCREAEQFLSSHMSQLLKPPLDKNWIHQMAIQWE----TNRFSIQGKGW 419
Query: 470 ERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVEVFVRNPM 525
+ A D+AI+GLGWIS G++ + VP+ + + +R+P+
Sbjct: 420 KESAGDIAIAGLGWISF---------------VGCGKMEVDCIVPRGIRLELRDPL 460
>gi|421876418|ref|ZP_16307975.1| GTP-binding protein yqeH [Leuconostoc citreum LBAE C10]
gi|372557711|emb|CCF24095.1| GTP-binding protein yqeH [Leuconostoc citreum LBAE C10]
Length = 381
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 112/388 (28%), Positives = 183/388 (47%), Gaps = 51/388 (13%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +Q ++++ GY+ KK +LC RC L H + I V
Sbjct: 20 CIGCGALMQVTDANKSGYLPMSAL---KKTIDSDELLCQRCFRLRHYNEIQPVE------ 70
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGA-NPIILVVTKVD 219
++ D+ L + KALIV ++D+ D GS ++ + G NPI++V KVD
Sbjct: 71 -----LTDDDFATLLHQISETKALIVYVIDVFDVTGSEISGLPRFVGQDNPILVVANKVD 125
Query: 220 LLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILG 279
LLPK + N + +W+ + + + LTS+ + + ++ ++GRDVY++G
Sbjct: 126 LLPKLLNKNRLKNWLQAELKAQGIQPADIFLTSATKPQNLDDLLDKVDTLRQGRDVYVVG 185
Query: 280 SANVGKSAFINALLK-KMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDT 338
NVGKS IN ++K + G D S PGTTL I+I G L DT
Sbjct: 186 VTNVGKSTLINQIIKSRTGVTDLITT---------SRFPGTTLDRIEI-PLADGQFLIDT 235
Query: 339 PGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLV 398
PG+ + A V+ ++L P++ ++ +++ + E TIF GGL
Sbjct: 236 PGIIKRDQIAHVLDDKNLKYALPKNEIKPRTYQLNPEQ--------------TIFIGGLA 281
Query: 399 RIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDR 458
R D + + +T Y +L ++ AD+FYQK +G L P + +
Sbjct: 282 RFD-FEAGQRSAVTAYFENNLNLHRTKLLGADDFYQKHVGNLLAPSPTQ--------VTT 332
Query: 459 ERLLEIKFEDTERPASDVAISGLGWISV 486
L++ +F TE+ SD+ +GLGW++V
Sbjct: 333 STLVKHQFHTTEK--SDIVFAGLGWVTV 358
>gi|319937329|ref|ZP_08011736.1| hypothetical protein HMPREF9488_02571 [Coprobacillus sp. 29_1]
gi|319807695|gb|EFW04288.1| hypothetical protein HMPREF9488_02571 [Coprobacillus sp. 29_1]
Length = 366
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 113/388 (29%), Positives = 172/388 (44%), Gaps = 54/388 (13%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C+GCGA +Q GYV K VLC RC L + H +
Sbjct: 7 CFGCGAIIQNENEKHIGYVPKSAMNNDK-------VLCQRCFQLKNYHKLQETN------ 53
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ L + + L+V ++D+ DFNGS + + N ++++ K D+
Sbjct: 54 -----MTKDDFLTILQQIGEKDCLVVYMIDLFDFNGSMIQGLMRHIAYNDVLVLANKRDI 108
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + WV + + + V +TS K + I + +KGRDVY++G
Sbjct: 109 LPKSVKERKLEHWVRRQLKDQGVQAVDVIVTSGKKSMNFDDIYDAIMEHRKGRDVYVVGV 168
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS FIN LLK E + + S PGTTL I+I LYDTPG
Sbjct: 169 TNVGKSTFINGLLKHYAEVEKQNLIT------VSEYPGTTLNLIEI-PLDEHSVLYDTPG 221
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGF-TIFWGGLVR 399
+ + ++ ED+ + PQ LR F LN T+++GGL R
Sbjct: 222 IINESQMTHLLAPEDIKKVVPQGELRPMGFQ---------------LNSLQTLYFGGLGR 266
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
ID L+ ++ Y K+L+++ T KAD+ Y + TL I G+D
Sbjct: 267 IDYLEG-EQSSFIAYFSKNLKIHRTKTIKADDLYNRHQ--TLQYEIA--------GIDSI 315
Query: 460 RLLEIKFEDTERPA-SDVAISGLGWISV 486
++ +E P +D+ ISGLG+I+V
Sbjct: 316 AQMK-SYEFRLMPGKTDIVISGLGFITV 342
>gi|219127817|ref|XP_002184124.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217404355|gb|EEC44302.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 710
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 129/431 (29%), Positives = 209/431 (48%), Gaps = 67/431 (15%)
Query: 117 GYVDPDTYELKKKHHQFKTVLCGRCR-LLSHGHMITAVGGNGGYAGGKQFVSADELREKL 175
G + D EL KK V+C RC L + G + ++ G+ + +S ++ RE L
Sbjct: 297 GEMGLDLVELSKK-----MVICKRCHGLQNFGKVQDSL--RPGWTK-EPLLSQEKFRELL 348
Query: 176 SHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDLLPKGTDFNCVGDWV- 234
++ + A+IV LVD+ DF+GS L + ++AG NP+IL K DLLP WV
Sbjct: 349 RPIKEKPAVIVALVDLFDFSGSVLPELDEIAGENPVILAANKADLLPSEMGRVRAESWVR 408
Query: 235 --VEATTKKKLNVL--SVHLTSSKSLAGI-------VGVASEIQKEKKGRDVYILGSANV 283
+E K L + +V L S K+ AGI G+A EI D+Y++G+AN
Sbjct: 409 RELEYLGVKSLAGMRGAVRLVSCKTGAGINDLLEKARGLAEEIDG-----DIYVVGAANA 463
Query: 284 GKSAFINALL-KKMGERDPAAAMAQKYRPIQSAV-----PGTTLGPIQIDAFLGGGK-LY 336
GKS +N +L + R P A A + AV PGTTL I++D LGGG+ LY
Sbjct: 464 GKSTLLNFVLGQDKVNRSPGKARAGNRNAFKGAVTTSPLPGTTLKFIKVD--LGGGRSLY 521
Query: 337 DTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGG 396
DTPG+ + ++ E+L + P+ + + + + G + GG
Sbjct: 522 DTPGLLVLGTVTQLLTPEELKIVVPKKPIEPVTLRLST--------------GKCVLVGG 567
Query: 397 LVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPI--GKQKAEGWK 454
L RI+L+ TF+ ++++ ++ADEF K G LTPP+ G ++ E
Sbjct: 568 LARIELIGDSRPFMFTFFVANEIKLHPTDIERADEFVLKHAGGMLTPPLAPGPKRMEEI- 626
Query: 455 GLDRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVP 514
G + +++I+ + A+D++++GLGW++V + +G + + VP
Sbjct: 627 GEFEDHIVDIQGAGWKEAAADISLTGLGWVAV---------------TGAGTAQVKISVP 671
Query: 515 KPVEVFVRNPM 525
K + V VR P+
Sbjct: 672 KGIGVSVRPPL 682
>gi|116630032|ref|YP_815204.1| GTP-binding protein YqeH [Lactobacillus gasseri ATCC 33323]
gi|311110338|ref|ZP_07711735.1| ribosome biogenesis GTPase YqeH [Lactobacillus gasseri MV-22]
gi|116095614|gb|ABJ60766.1| Predicted GTPase [Lactobacillus gasseri ATCC 33323]
gi|311065492|gb|EFQ45832.1| ribosome biogenesis GTPase YqeH [Lactobacillus gasseri MV-22]
Length = 369
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 110/385 (28%), Positives = 173/385 (44%), Gaps = 46/385 (11%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG+ LQ + GY+ P + K V C RC L H + I V N
Sbjct: 7 CIGCGSILQDQDPKKSGYL-PTSALKKALTSDDNEVYCQRCFRLRHYNEIMPVEENN--- 62
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
D+ L+ + ++KAL+V +VD+ DF+ S ++ I+ G N ILVV KVDL
Sbjct: 63 --------DDFLALLNSISQKKALVVNVVDLFDFSNSLISSIKRFIGGNEYILVVNKVDL 114
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
PK + + + DW+ + + L + L S+ + + + + K+ + +D+Y +G+
Sbjct: 115 FPKNSKESKIKDWMRQEANRNGLKPEKIFLVSAAKKKNLADLMAFLAKKGEKKDIYFVGT 174
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS INA++ + S PGTTL I+I G L DTPG
Sbjct: 175 TNVGKSTLINAIINMNSDLKDVIT--------TSKFPGTTLDEIKI-PLSNGHYLIDTPG 225
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ ++ A+ + ++L + P+ L+ ++ + L G TIF GL R
Sbjct: 226 ILNANQLASHLSGKELEVVEPKKPLKPATYQL--------------LPGQTIFLAGLGRF 271
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D + P + T Y + L V+ T+ AD FY+K L PP KG
Sbjct: 272 DYVDG-PSSGFTIYVARDLYVHRTKTENADTFYEKHKDDLLLPPSKDDCLGPLKGQ---- 326
Query: 461 LLEIKFEDTERPASDVAISGLGWIS 485
F E+ SD+ G+G+I+
Sbjct: 327 ----TFSPKEK--SDILFGGVGFIT 345
>gi|375089692|ref|ZP_09736017.1| ribosome biogenesis GTPase YqeH [Facklamia languida CCUG 37842]
gi|374566539|gb|EHR37778.1| ribosome biogenesis GTPase YqeH [Facklamia languida CCUG 37842]
Length = 380
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 113/386 (29%), Positives = 168/386 (43%), Gaps = 46/386 (11%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +Q + D GY+ + KK + C RC L H + + V
Sbjct: 18 CIGCGAMIQWEDPDRAGYLPESAF---KKGIEEDGFYCQRCFRLRHYNELHPVE------ 68
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
VS + R+ LS L E+AL+VK+VDI D GS ++ + G P ++V K+DL
Sbjct: 69 -----VSEEVFRDHLSSLADEEALVVKVVDIFDVEGSLISGFSRIIGKQPFVVVANKMDL 123
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK N V W+ E + L + L S+ + + + I+ K ++VY++G
Sbjct: 124 LPKSVKANRVKHWLKECLRENGLIASEILLLSAHKESTLHPLFDLIKTALKTKNVYLVGV 183
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS +N L++ G + PGTTL I I + DTPG
Sbjct: 184 TNVGKSTLMNQLIRHFGGEQGVITTSNH--------PGTTLDKIVIPV-TDQTAIIDTPG 234
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ H+ A + + + P R++ ++F + E T+F GL +I
Sbjct: 235 IIQSHQLAHYLDRRGVKNILPSKRIKPKTFQLNPEQ--------------TLFLAGLAQI 280
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D L +T T Y L ++ A +F K G L+PP Q E + +
Sbjct: 281 DFLAG-DKTSFTCYASNDLYLHRSKLAGASDFLSKHQGDLLSPPYTDQLVEFPEMIAHTV 339
Query: 461 LLEIKFEDTERPASDVAISGLGWISV 486
LE P D+AISGLGWI V
Sbjct: 340 FLE--------PNQDLAISGLGWICV 357
>gi|427440016|ref|ZP_18924545.1| ribosome biogenesis GTPase YqeH [Pediococcus lolii NGRI 0510Q]
gi|425787848|dbj|GAC45333.1| ribosome biogenesis GTPase YqeH [Pediococcus lolii NGRI 0510Q]
Length = 322
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 100/322 (31%), Positives = 156/322 (48%), Gaps = 35/322 (10%)
Query: 166 VSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDLLPKGT 225
+S D+ R+ LS + +L+V +VD+ DFNGS + + G NP++LV K D+ PK
Sbjct: 12 ISDDDFRKLLSQISDSDSLVVYVVDMFDFNGSLIPGLHRFVGDNPVLLVGNKADVFPKSI 71
Query: 226 DFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGSANVGK 285
+ + +W+ + + + V +TS+K + + +I++ + GRDVY++G NVGK
Sbjct: 72 KRHRMREWLRQQAKANGIEPVDVMITSAKQRPAVEQLFDKIEQLRDGRDVYVVGVTNVGK 131
Query: 286 SAFINALLK-KMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPGVHLH 344
S IN+L+ + G +D S PGTTL I+I F K+ DTPG+ +
Sbjct: 132 STLINSLIALRNGIKDVITT---------SRFPGTTLDRIEI-PFDDHSKMIDTPGIVHN 181
Query: 345 HRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRIDLLK 404
+ A V+ AEDL ++P+ ++ + + + E T+F G L R D
Sbjct: 182 DQMAHVLTAEDLKYISPKKTIKPRVYQLGDEQ--------------TLFAGALARFDYEH 227
Query: 405 VLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRERLLEI 464
+T Y +L ++ AD FY+K G LTPP AE L
Sbjct: 228 --STGSVTAYFDNNLMIHRTKLANADHFYEKHAGELLTPP----AAENLANLPELARHHF 281
Query: 465 KFEDTERPASDVAISGLGWISV 486
K E+ SDV GLGWI+V
Sbjct: 282 KIEED----SDVVFEGLGWIAV 299
>gi|339481026|ref|ZP_08656685.1| GTPase YqeH [Leuconostoc pseudomesenteroides KCTC 3652]
Length = 381
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 123/428 (28%), Positives = 191/428 (44%), Gaps = 70/428 (16%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +Q + + GY+ KK + C RC L H + I V
Sbjct: 20 CIGCGALMQITSPEKAGYLPLSAL---KKSIDSDALFCQRCFRLRHYNEIQPVE------ 70
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARI-RDLAGANPIILVVTKVD 219
++ D+ L + KALIV +VD+ D GS +A + R + NPI++V KVD
Sbjct: 71 -----LTDDDFARLLHQISETKALIVYVVDLFDVTGSEIAGLPRFVGDNNPILVVGNKVD 125
Query: 220 LLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILG 279
LLPK N + W+ + + + LTS+ + + I + + RDVY++G
Sbjct: 126 LLPKLLKQNRLKQWLQAMLKTQGIKPADIFLTSAAHPKNLDELLECIDQLRHDRDVYVVG 185
Query: 280 SANVGKSAFINALLK-KMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDT 338
NVGKS IN ++K + G +D S PGTTL I+I G +L DT
Sbjct: 186 VTNVGKSTLINQIIKSRTGVQDLITT---------SRFPGTTLDRIEI-PLADGHQLIDT 235
Query: 339 PGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLV 398
PG+ + A V+ +DL P+ ++ +++ + E T+F GGL
Sbjct: 236 PGIIKREQMAHVIADKDLKYALPKKEIKPRTYQLNPEQ--------------TLFLGGLA 281
Query: 399 RIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTP-PIGKQKAEGWKGLD 457
R D L T +T Y +L ++ + ADEFY + +G LTP P+ L
Sbjct: 282 RFDFLSG-ERTAVTAYFENNLNIHRTKLNGADEFYNRHVGELLTPAPL---------NLT 331
Query: 458 RERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPV 517
L++ +F E+ SD+ +GLGWI++ + +A VP+ V
Sbjct: 332 TSPLVKREFNIIEK--SDLVFAGLGWITL-----------------PAGIKVAGWVPEGV 372
Query: 518 EVFVRNPM 525
+V +R M
Sbjct: 373 DVLIRKAM 380
>gi|227431108|ref|ZP_03913166.1| GTP-binding protein [Leuconostoc mesenteroides subsp. cremoris ATCC
19254]
gi|227353148|gb|EEJ43316.1| GTP-binding protein [Leuconostoc mesenteroides subsp. cremoris ATCC
19254]
Length = 379
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 113/388 (29%), Positives = 179/388 (46%), Gaps = 53/388 (13%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +Q + D GY+ KK + + C RC L H + I V
Sbjct: 20 CIGCGALMQVEDKDKIGYLPMSAL---KKSISSEELFCQRCFRLRHYNEIQPVE------ 70
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGA-NPIILVVTKVD 219
++ D+ L + KALIV ++D+ D GS ++ + G NPI++V K D
Sbjct: 71 -----LTDDDFANLLHQISDTKALIVYVIDVFDVTGSAISGLPRFVGKDNPILVVANKAD 125
Query: 220 LLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILG 279
LLPK + N + +W+ + + + V LTS+ + + I + GRDV+++G
Sbjct: 126 LLPKLLNKNRLKNWLRTELKAQGIQPVDVFLTSATRPKNLDDLLDTIDNFRDGRDVFVVG 185
Query: 280 SANVGKSAFINALLK-KMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDT 338
NVGKS IN ++K + G ++ S PGTTL I+I G +L DT
Sbjct: 186 VTNVGKSTLINQIIKSRTGIQNLITT---------SRFPGTTLDRIEI-PLEDGQQLIDT 235
Query: 339 PGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLV 398
PG+ + A V+ +DL P++ ++ +++ + E TIF GGL
Sbjct: 236 PGIIKRDQMAHVLTDKDLKFALPKNEIKPRTYQLNPEQ--------------TIFIGGLA 281
Query: 399 RIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDR 458
R D + + +T Y +L ++ AD+FY++ G L P +
Sbjct: 282 RFDFISG-ARSAITAYFENNLNLHRTKLIGADDFYEQHAGGLLVPAPSQ----------L 330
Query: 459 ERLLEIKFEDTERPASDVAISGLGWISV 486
+ L++ +F TE SD+ SGLGWISV
Sbjct: 331 QNLIKHEFSITE--DSDIVFSGLGWISV 356
>gi|268319902|ref|YP_003293558.1| hypothetical protein FI9785_1431 [Lactobacillus johnsonii FI9785]
gi|262398277|emb|CAX67291.1| hypothetical protein predicted by Glimmer/Critica [Lactobacillus
johnsonii FI9785]
Length = 369
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 109/385 (28%), Positives = 172/385 (44%), Gaps = 46/385 (11%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG+ LQ + GY+ P + K V C RC L H + I V N
Sbjct: 7 CIGCGSILQDQDPKKSGYL-PSSALKKALESDDNEVYCQRCFRLRHYNEIMPVEENN--- 62
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
D+ L+ + ++KAL+V +VD+ DF+ S ++ I+ G N ILV KVDL
Sbjct: 63 --------DDFLALLNSISQKKALVVNVVDLFDFSNSLISSIKRFIGGNEYILVGNKVDL 114
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
PK + + + DW+ + + L + L S+ + + + + K+ + +D+Y +G+
Sbjct: 115 FPKNSKESKIKDWMRQEANRNGLKPEKIFLVSAAKKKNLDELMAFLAKKGEKKDIYFVGT 174
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS INA++ + S PGTTL I+I G L DTPG
Sbjct: 175 TNVGKSTLINAIINMNSDLKDVITT--------SKFPGTTLDEIKI-PLSNGNYLIDTPG 225
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ ++ A+ + ++L + P+ L+ ++ + L G TIF GL R
Sbjct: 226 ILNANQLASHLSGKELEVVEPKKPLKPATYQL--------------LPGQTIFLAGLGRF 271
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D + P T Y + L V+ T+ AD FY+K L PP + KG
Sbjct: 272 DYVDG-PSAGFTIYVARDLYVHRTKTENADAFYEKHKDDLLLPPSKEDNLGPLKGQ---- 326
Query: 461 LLEIKFEDTERPASDVAISGLGWIS 485
F E+ SD+ G+G+I+
Sbjct: 327 ----TFSPKEK--SDILFGGVGFIT 345
>gi|251798007|ref|YP_003012738.1| nitric-oxide synthase [Paenibacillus sp. JDR-2]
gi|247545633|gb|ACT02652.1| Nitric-oxide synthase [Paenibacillus sp. JDR-2]
Length = 374
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 114/432 (26%), Positives = 193/432 (44%), Gaps = 65/432 (15%)
Query: 95 NSAVASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVG 154
+S +C GCG LQT + GY L + + V+C RC + + + +++
Sbjct: 6 HSQSHACAGCGVKLQTEHPEESGY-------LPEAALSREPVICQRCFRIRNYNEASSIT 58
Query: 155 GNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILV 214
V D+ L + +L+V +VD+ DF GS ++ ++ G NP++LV
Sbjct: 59 -----------VDQDDFLRLLGSIGSTDSLVVHIVDLFDFEGSLISGLQRFVGNNPVVLV 107
Query: 215 VTKVDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRD 274
V KVDLLP+ + N + +WV + + L + + L S+K G V I++ +K RD
Sbjct: 108 VNKVDLLPRSVNLNRLRNWVQKQAKAEGLRTVDIVLCSAKRNIGFEHVIEAIERHRKDRD 167
Query: 275 VYILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGK 334
VY++G+ NVGKS IN L+ + + S PGTTL + I G
Sbjct: 168 VYVVGATNVGKSTLINRLIHDYSDMERELTT--------SRYPGTTLDAVHI-PLDDGKS 218
Query: 335 LYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFW 394
+ DTPG+ R +V L AL P ++ + + N+ +S +F
Sbjct: 219 IIDTPGIVYPTRMTEIVPRGFLQALLPDKPIKPLVYQL-------NDQQS-------LFI 264
Query: 395 GGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWK 454
LVR D ++ ++ TFY +L V+ ++A+E Y G L P +++ +
Sbjct: 265 NSLVRFDFVEGERQS-FTFYISNALHVHRTKLERAEELYADHRGELLGGP-SREELDEMP 322
Query: 455 GLDRERLLEIKFEDTERPA-SDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHV 513
R + R A D+ +SG+GWI TSG + + ++
Sbjct: 323 AWTRHSI------RIPRGAKKDIFVSGMGWIQA--------------NGTSGAI-VDIYA 361
Query: 514 PKPVEVFVRNPM 525
PK ++V +R+ +
Sbjct: 362 PKGIKVLLRDSL 373
>gi|300361205|ref|ZP_07057382.1| ribosome biogenesis GTPase YqeH [Lactobacillus gasseri JV-V03]
gi|300353824|gb|EFJ69695.1| ribosome biogenesis GTPase YqeH [Lactobacillus gasseri JV-V03]
Length = 369
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 109/385 (28%), Positives = 172/385 (44%), Gaps = 46/385 (11%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG+ LQ + GY+ P + K V C RC L H + I V N
Sbjct: 7 CIGCGSILQDQDPKKSGYL-PTSALKKALTSDDNEVYCQRCFRLRHYNEIMPVEENN--- 62
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
D+ L+ + ++KAL+V +VD+ DF+ S ++ I+ G N ILV KVDL
Sbjct: 63 --------DDFLALLNSISQKKALVVNVVDLFDFSNSLISSIKRFIGGNEYILVGNKVDL 114
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
PK + + + DW+ + + L + L S+ + + + + K+ + +D+Y +G+
Sbjct: 115 FPKNSKESKIKDWMRQEANRNGLKPEKIFLVSAAKKKNLADLMAFLAKKGEKKDIYFVGT 174
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS INA++ + S PGTTL I+I G L DTPG
Sbjct: 175 TNVGKSTLINAIINMNSDLKDVIT--------TSKFPGTTLDEIKI-PLSNGHYLIDTPG 225
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ ++ A+ + ++L + P+ L+ ++ + L G TIF GL R
Sbjct: 226 ILNANQLASHLSGKELEVVEPKKPLKPATYQL--------------LPGQTIFLAGLGRF 271
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D + P T Y + L V+ T+ AD FY+K L PP + KG
Sbjct: 272 DYVDG-PSAGFTIYVARDLYVHRTKTENADTFYEKHKDDLLLPPSKEDNLGPLKGQ---- 326
Query: 461 LLEIKFEDTERPASDVAISGLGWIS 485
F E+ SD+ G+G+I+
Sbjct: 327 ----TFSPKEK--SDILFGGVGFIT 345
>gi|227889535|ref|ZP_04007340.1| GTP-binding protein [Lactobacillus johnsonii ATCC 33200]
gi|227850013|gb|EEJ60099.1| GTP-binding protein [Lactobacillus johnsonii ATCC 33200]
Length = 369
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 109/385 (28%), Positives = 172/385 (44%), Gaps = 46/385 (11%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG+ LQ + GY+ P + K V C RC L H + I V N
Sbjct: 7 CIGCGSILQDQDPKKSGYL-PSSALKKALESDDNEVYCQRCFRLRHYNEIMPVEENN--- 62
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
D+ L+ + ++KAL+V +VD+ DF+ S ++ I+ G N ILV KVDL
Sbjct: 63 --------DDFLALLNSISQKKALVVNVVDLFDFSNSLISSIKRFIGGNEYILVGNKVDL 114
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
PK + + + DW+ + + L + L S+ + + + + K+ + +D+Y +G+
Sbjct: 115 FPKNSKESKIKDWMRQEANRNGLKPEKIFLVSAAKKKNLDELMAFLAKKGEKKDIYFVGT 174
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS INA++ + S PGTTL I+I G L DTPG
Sbjct: 175 TNVGKSTLINAIINMNSDLKDVITT--------SKFPGTTLDEIKI-PLSNGHYLIDTPG 225
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ ++ A+ + ++L + P+ L+ ++ + L G TIF GL R
Sbjct: 226 ILNANQLASHLSGKELEVVEPKKPLKPATYQL--------------LPGQTIFLAGLGRF 271
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D + P T Y + L V+ T+ AD FY+K L PP + KG
Sbjct: 272 DYVDG-PSAGFTIYVARDLYVHRTKTENADAFYEKHKDDLLLPPSKEDNLGPLKGQ---- 326
Query: 461 LLEIKFEDTERPASDVAISGLGWIS 485
F E+ SD+ G+G+I+
Sbjct: 327 ----TFSPKEK--SDILFGGVGFIT 345
>gi|42519513|ref|NP_965443.1| GTP-binding protein YqeH [Lactobacillus johnsonii NCC 533]
gi|41583801|gb|AAS09409.1| hypothetical protein LJ_1637 [Lactobacillus johnsonii NCC 533]
Length = 369
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 109/385 (28%), Positives = 172/385 (44%), Gaps = 46/385 (11%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG+ LQ + GY+ P + K V C RC L H + I V N
Sbjct: 7 CIGCGSILQDQDPKKSGYL-PSSALKKALESDDNEVYCQRCFRLRHYNEIMPVEENN--- 62
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
D+ L+ + ++KAL+V +VD+ DF+ S ++ I+ G N ILV KVDL
Sbjct: 63 --------DDFLALLNSISQKKALVVNVVDLFDFSNSLISSIKRFIGGNEYILVGNKVDL 114
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
PK + + + DW+ + + L + L S+ + + + + K+ + +D+Y +G+
Sbjct: 115 FPKNSKESKIKDWMRQEANRNGLKPEKIFLVSAAKKKNLDELMAFLAKKGEKKDIYFVGT 174
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS INA++ + S PGTTL I+I G L DTPG
Sbjct: 175 TNVGKSTLINAIINMNSDLKDVITT--------SKFPGTTLDEIKI-PLSNGHYLIDTPG 225
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ ++ A+ + ++L + P+ L+ ++ + L G TIF GL R
Sbjct: 226 ILNANQLASHLSGKELEVVEPKKPLKPATYQL--------------LPGQTIFLAGLGRF 271
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D + P T Y + L V+ T+ AD FY+K L PP + KG
Sbjct: 272 DYVDG-PSAGFTIYVARDLYVHRTKTENADVFYEKHKDDLLLPPSKEDNLGPLKGQ---- 326
Query: 461 LLEIKFEDTERPASDVAISGLGWIS 485
F E+ SD+ G+G+I+
Sbjct: 327 ----TFSPKEK--SDILFGGVGFIT 345
>gi|399516596|ref|ZP_10758193.1| GTP-binding protein YqeH, required for biogenesis of 30S ribosome
subunit [Leuconostoc pseudomesenteroides 4882]
gi|398648505|emb|CCJ66220.1| GTP-binding protein YqeH, required for biogenesis of 30S ribosome
subunit [Leuconostoc pseudomesenteroides 4882]
Length = 381
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 120/428 (28%), Positives = 190/428 (44%), Gaps = 70/428 (16%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +Q ++ + GY+ KK + C RC L H + I V
Sbjct: 20 CIGCGALMQITDPEKAGYLPLSAL---KKAIDSDALFCKRCFRLRHYNEIQPVE------ 70
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGAN-PIILVVTKVD 219
++ D+ L + ALIV ++D+ D GS +A + G N PI++V KVD
Sbjct: 71 -----LTDDDFARLLHQISDTNALIVYVMDLFDMTGSEIAGLPRFVGENNPILVVGNKVD 125
Query: 220 LLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILG 279
LLPK + N + W+ + + + LTS+ I + + + + RDVY++G
Sbjct: 126 LLPKLLNQNRLKQWLQTMLKAQGIKPADIFLTSAAHPKNIDALLERVDQLRLDRDVYVVG 185
Query: 280 SANVGKSAFINALLK-KMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDT 338
NVGKS IN ++K + G +D S PGTTL I+I G +L DT
Sbjct: 186 VTNVGKSTLINQIIKSRTGVQDLITT---------SRFPGTTLDRIEI-PLADGHQLIDT 235
Query: 339 PGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLV 398
PG+ + A V+ +DL P+ ++ +++ + E T+F GGL
Sbjct: 236 PGIIKREQMAHVIADKDLKYALPKKEIKPRTYQLNPEQ--------------TLFLGGLA 281
Query: 399 RIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTP-PIGKQKAEGWKGLD 457
R D + T +T Y +L ++ + AD FY + +G LTP P+ L
Sbjct: 282 RFDFVSG-ERTAVTAYFENNLNIHRTKLNGADAFYNRHVGELLTPAPL---------NLT 331
Query: 458 RERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPV 517
L++ +F E+ SD+ +GLGWI+V + +A VP+ V
Sbjct: 332 ASPLVKREFNIIEK--SDLVFAGLGWITV-----------------PAGIKVAGWVPEGV 372
Query: 518 EVFVRNPM 525
+V +R M
Sbjct: 373 DVLIRKAM 380
>gi|238853781|ref|ZP_04644147.1| ribosome biogenesis GTPase YqeH [Lactobacillus gasseri 202-4]
gi|420147894|ref|ZP_14655168.1| Ribosome biogenesis GTPase YqeH [Lactobacillus gasseri CECT 5714]
gi|238833590|gb|EEQ25861.1| ribosome biogenesis GTPase YqeH [Lactobacillus gasseri 202-4]
gi|398400562|gb|EJN54109.1| Ribosome biogenesis GTPase YqeH [Lactobacillus gasseri CECT 5714]
Length = 369
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 109/385 (28%), Positives = 172/385 (44%), Gaps = 46/385 (11%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG+ LQ + GY+ P + K V C RC L H + I V N
Sbjct: 7 CIGCGSILQDQDPKKSGYL-PTSALKKALTSDDNEVYCQRCFRLRHYNEIMPVEENN--- 62
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
D+ L+ + ++KAL+V +VD+ DF+ S ++ I+ G N ILV KVDL
Sbjct: 63 --------DDFLALLNSISQKKALVVNVVDLFDFSNSLISSIKRFIGGNEYILVGNKVDL 114
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
PK + + + DW+ + + L + L S+ + + + + K+ + +D+Y +G+
Sbjct: 115 FPKNSKESKIKDWMRQEANRNGLKPEKIFLVSAAKKKNLADLMAFLAKKGEKKDIYFVGT 174
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS INA++ + S PGTTL I+I G L DTPG
Sbjct: 175 TNVGKSTLINAIINMNSDLKDVIT--------TSKFPGTTLDEIKI-PLSNGHYLIDTPG 225
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ ++ A+ + ++L + P+ L+ ++ + L G TIF GL R
Sbjct: 226 ILNANQLASHLSGKELEVVEPKKPLKPATYQL--------------LPGQTIFLAGLGRF 271
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D + P + T Y + L V+ T+ AD FY+K L PP KG
Sbjct: 272 DYVDG-PSSGFTIYVARDLYVHRTKTENADTFYEKHKDDLLLPPSKDDCLGPLKGQ---- 326
Query: 461 LLEIKFEDTERPASDVAISGLGWIS 485
F E+ SD+ G+G+I+
Sbjct: 327 ----TFSPKEK--SDILFGGVGFIT 345
>gi|385826308|ref|YP_005862650.1| hypothetical protein [Lactobacillus johnsonii DPC 6026]
gi|417837997|ref|ZP_12484235.1| GTP-binding protein YqeH, required for biogenesis of 30S ribosome
subunit [Lactobacillus johnsonii pf01]
gi|329667752|gb|AEB93700.1| hypothetical protein LJP_1378c [Lactobacillus johnsonii DPC 6026]
gi|338761540|gb|EGP12809.1| GTP-binding protein YqeH, required for biogenesis of 30S ribosome
subunit [Lactobacillus johnsonii pf01]
Length = 369
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 108/385 (28%), Positives = 172/385 (44%), Gaps = 46/385 (11%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG+ LQ + GY+ P + + V C RC L H + I V N
Sbjct: 7 CIGCGSILQDQDPKKSGYL-PSSALKRALESDDNEVYCQRCFRLRHYNEIMPVEENN--- 62
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
D+ L+ + ++KAL+V +VD+ DF+ S ++ I+ G N ILV KVDL
Sbjct: 63 --------DDFLALLNSISQKKALVVNVVDLFDFSNSLISSIKRFIGGNEYILVGNKVDL 114
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
PK + + + DW+ + + L + L S+ + + + + K+ + +D+Y +G+
Sbjct: 115 FPKNSKESKIKDWMRQEANRNGLKPEKIFLVSAAKKKNLDELMAFLAKKGEKKDIYFVGT 174
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS INA++ + S PGTTL I+I G L DTPG
Sbjct: 175 TNVGKSTLINAIINMNSDLKDVITT--------SKFPGTTLDEIKI-PLSNGHYLIDTPG 225
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ ++ A+ + ++L + P+ L+ ++ + L G TIF GL R
Sbjct: 226 ILNANQLASHLSGKELEVVEPKKPLKPATYQL--------------LPGQTIFLAGLGRF 271
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
D + P T Y + L V+ T+ AD FY+K L PP + KG
Sbjct: 272 DYVDG-PSAGFTIYVARDLYVHRTKTENADAFYEKHKDDLLLPPSKEDNLGPLKGQ---- 326
Query: 461 LLEIKFEDTERPASDVAISGLGWIS 485
F E+ SD+ G+G+I+
Sbjct: 327 ----TFSPKEK--SDILFGGVGFIT 345
>gi|418183293|ref|ZP_12819850.1| GTPase family protein [Streptococcus pneumoniae GA43380]
gi|353847722|gb|EHE27742.1| GTPase family protein [Streptococcus pneumoniae GA43380]
Length = 293
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 96/303 (31%), Positives = 157/303 (51%), Gaps = 34/303 (11%)
Query: 185 IVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDLLPKGTDFNCVGDWVVEATTKKKLN 244
+V ++DI DFNGS + + N ++LV K D+LPK + W+++ ++ L
Sbjct: 1 MVNVIDIFDFNGSVIPGLPRFVSGNDVLLVGNKKDILPKSVKSGKISQWLMKRAHEEGLR 60
Query: 245 VLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGSANVGKSAFINALLKKM-GERDPAA 303
+ V LTS+++ I V +I+ +KGRDVY++G NVGKS INA+++++ G+++
Sbjct: 61 PVDVVLTSAQNKHAIKEVIDKIEHYRKGRDVYVVGVTNVGKSTLINAIIQEITGDQNVIT 120
Query: 304 AMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPGVHLHHRQAAVVHAEDLPALAPQS 363
S PGTTL I+I G +YDTPG+ H+ A + A++L ++P+
Sbjct: 121 T---------SRFPGTTLDKIEI-PLDDGSYIYDTPGIIHRHQMAHYLTAKNLKYVSPKK 170
Query: 364 RLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRIDLLKVLPETCLTFYGPKSLQVYM 423
++ +++ + E T+F GGL R D + + F+ L+++
Sbjct: 171 EIKPKTYQLNPEQ--------------TLFLGGLGRFDFITGEKQGFTAFFD-NELKLHR 215
Query: 424 VPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRERLLEIKFEDTERPASDVAISGLGW 483
+ A FY K LG LTPP K+K D RL++ F T + +D+ ISGLGW
Sbjct: 216 SKLEGASAFYDKHLGTLLTPPNSKEKE------DFPRLVQHVF--TIKDKTDLVISGLGW 267
Query: 484 ISV 486
I V
Sbjct: 268 IRV 270
>gi|307103134|gb|EFN51397.1| hypothetical protein CHLNCDRAFT_141029 [Chlorella variabilis]
Length = 560
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 106/270 (39%), Positives = 158/270 (58%), Gaps = 18/270 (6%)
Query: 163 KQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDLLP 222
K ++ +ELR+KL +++++AL+V LVD++D +GS L ++R+L G NPI+LV TK DLLP
Sbjct: 69 KALLTPEELRQKLKVVQQQRALVVLLVDLLDASGSILGKVRELVGNNPIMLVGTKADLLP 128
Query: 223 KGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGSAN 282
G D V W+ A K++ +SVHL SS++ AG+ I++E++GRDV+++G+AN
Sbjct: 129 AGADGAQVAAWLQAAAAFKRIAAVSVHLVSSRTGAGVPEAVGAIRRERRGRDVFVMGAAN 188
Query: 283 VGKSAFINALLK---KMGER--DPAAAMAQKYRPIQSAVPGTTLG--PIQIDAFLGGGKL 335
VGKSAFI AL+K +MG R DP A +Y P++SA+PGTTL P++ +L
Sbjct: 189 VGKSAFIRALMKDMCRMGSRQFDPQALSRGRYLPVESAMPGTTLELIPMENKQLHPRRRL 248
Query: 336 Y----DTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFT 391
+PG L AA +PA + R G + A + T
Sbjct: 249 RPYVPPSPGELLQVTAAAC----SMPA---RPRDAGGAAAGAGAGAAAAAAAGPSCHVAT 301
Query: 392 IFWGGLVRIDLLKVLPETCLTFYGPKSLQV 421
+WGGL ++ LL P+T L FYGP++L V
Sbjct: 302 YWWGGLAKLQLLSCPPDTELVFYGPQALLV 331
>gi|407718715|ref|YP_006796120.1| GTPase YqeH [Leuconostoc carnosum JB16]
gi|407242471|gb|AFT82121.1| GTPase YqeH [Leuconostoc carnosum JB16]
Length = 381
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 117/427 (27%), Positives = 189/427 (44%), Gaps = 68/427 (15%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +Q +E GY+ KK + + C RC L H + I V
Sbjct: 20 CVGCGALMQITEPQNAGYL---PLSALKKAIDSEELFCQRCFRLRHYNEIQPVE------ 70
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGA-NPIILVVTKVD 219
++ D+ + L + K+LIV ++D+ D GS ++ + G NPI++V K+D
Sbjct: 71 -----LTDDDFADLLHQISDTKSLIVYVMDVFDVTGSEISGLPRFVGQDNPILVVANKID 125
Query: 220 LLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILG 279
LLPK + + +W+ + + + LTS+ + + I ++ RDVY++G
Sbjct: 126 LLPKLLNKRRLKNWLQAELKSQGIQPADIFLTSATHPKNLDDLLETIDDLRQDRDVYVVG 185
Query: 280 SANVGKSAFINALLK-KMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDT 338
NVGKS IN ++K + G +D S PGTTL I I G L DT
Sbjct: 186 VTNVGKSTLINQIIKSRTGIQDLITT---------SRFPGTTLDRIVI-PLSDGKDLIDT 235
Query: 339 PGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLV 398
PG+ + A V+ +DL P++ ++ +++ + E T+F GGL
Sbjct: 236 PGIIKRDQMAYVLSNKDLKYALPKNEIKPRTYQLNPEQ--------------TLFIGGLA 281
Query: 399 RIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDR 458
R D + T +T Y +L+++ ADE Y K +G L P G+
Sbjct: 282 RFD-FESGERTAITAYFENNLKLHRTKLAGADELYDKHVGELLQP--------APSGIST 332
Query: 459 ERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVE 518
L++ +F TE+ SD+ SGLGW++V ++ ++ PK V
Sbjct: 333 HELIKHEFNVTEK--SDIVFSGLGWMTV-----------------PADIKVSGWAPKGVS 373
Query: 519 VFVRNPM 525
V +R M
Sbjct: 374 VLIRKAM 380
>gi|303277393|ref|XP_003057990.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226460647|gb|EEH57941.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 136
Score = 141 bits (356), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 72/139 (51%), Positives = 95/139 (68%), Gaps = 7/139 (5%)
Query: 102 YGCGAPLQTSESDAPGYVDPDTYELKKKHHQ-FKTVLCGRCRLLSHGHMITAVGGNGGYA 160
YGCG LQT D GYV P+ YE K+ H Q + ++LC RC LS+G MI AV G GG A
Sbjct: 1 YGCGVALQTDHPDVSGYVPPEEYETKRVHRQLYASMLCSRCSALSNGRMINAVAGQGG-A 59
Query: 161 GGKQF---VSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTK 217
F ++ ++LRE L+ +R +KAL+V VD DF+GSFL R+RD+ GANPI+LV+TK
Sbjct: 60 RADDFSGLITPEQLRESLAVIRAKKALVV--VDATDFHGSFLNRVRDVVGANPILLVLTK 117
Query: 218 VDLLPKGTDFNCVGDWVVE 236
+DLLP+GTD + DWV +
Sbjct: 118 IDLLPRGTDAEKLKDWVFD 136
>gi|397620424|gb|EJK65712.1| hypothetical protein THAOC_13399 [Thalassiosira oceanica]
Length = 613
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 119/414 (28%), Positives = 196/414 (47%), Gaps = 51/414 (12%)
Query: 122 DTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYAGGKQFVSADELREKLSHLRRE 181
D EL KK V+C RC L + + G + +S ++ R+ L L+ +
Sbjct: 205 DLEELAKKK-----VICKRCHGLQNFGTVEKNLRPGWT--DEPTLSQEQFRKLLMPLQNK 257
Query: 182 KALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDLLPKGTDFNCVGDWVVEATTKK 241
A+I+ LVD+ DF+GS L + +AG NP+IL K DLLP +WV
Sbjct: 258 VAVIIALVDLFDFSGSVLPELDKIAGDNPVILAANKADLLPSEMGHVRAENWVRRELEYL 317
Query: 242 KLNVL-----SVHLTSSKSLAGIVGVASEIQK--EKKGRDVYILGSANVGKSAFINALLK 294
+N + +V L S K+ GI + + Q E+K D+Y++G+AN GKS + K
Sbjct: 318 DVNSIANIGGAVRLVSCKTGYGISALMEKAQSLAEEKECDIYVVGAANAGKS--YDGASK 375
Query: 295 KMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGK-LYDTPGVHLHHRQAAVVHA 353
K G+ A K S +PGTTL I++D L GGK LYDTPG+ + +
Sbjct: 376 KNGKMRAGNANKWKGSVTTSPLPGTTLQFIKVD--LSGGKVLYDTPGLLVPGCLTERLTP 433
Query: 354 EDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRIDLLKVLPETCLTF 413
E+L + P+ R+ +F + + G GGL R++L+ TF
Sbjct: 434 EELKIVVPKKRVEPVTFRIQA--------------GKCALVGGLARVELIGDCKPFLFTF 479
Query: 414 YGPKSLQVYMVPTDKADEFYQKELGVTLTPPI--GKQKAEGWKGLDRERLLEIKFEDTER 471
+ +++++ + KAD+F +G LTPP+ G+ + E + +E++ E ++
Sbjct: 480 FVANEIKLHLTSSLKADDFISSHVGKLLTPPLEPGQARLEEIGEFEYHE-IEVQGEGWKQ 538
Query: 472 PASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVEVFVRNPM 525
A+D+ + GLGW++V + +G + + VPK + V +R P+
Sbjct: 539 AAADITLRGLGWVAV---------------TGAGRAKVRIGVPKGIGVSLRPPL 577
>gi|330719333|ref|ZP_08313933.1| GTPase YqeH [Leuconostoc fallax KCTC 3537]
Length = 379
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 117/409 (28%), Positives = 184/409 (44%), Gaps = 55/409 (13%)
Query: 89 DKVLKVNSAVA-SCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHG 147
D+ LK A C GCGA +Q E + GY+ +K +LC RC L H
Sbjct: 7 DEYLKAQLAEGLQCIGCGARMQIDEPEHAGYLPLSAL---RKQIDNDELLCQRCFRLRHY 63
Query: 148 HMITAVGGNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAG 207
+ I V ++ D+ L + +AL+V ++D+ D GS ++ + G
Sbjct: 64 NEIQPVE-----------LTDDDFARLLHQISATRALVVYVIDVFDVTGSIISGLPRFVG 112
Query: 208 AN-PIILVVTKVDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEI 266
N PI++V KVDLLPK + + W+ ++ + + LTS+K + + +I
Sbjct: 113 QNNPILVVANKVDLLPKSLNKQRLKQWLQGVLKEQGIQAVDTFLTSAKKPQNLDELLEKI 172
Query: 267 QKEKKGRDVYILGSANVGKSAFINALLK-KMGERDPAAAMAQKYRPIQSAVPGTTLGPIQ 325
+ + G DVY++G NVGKS IN ++K + G ++ S PGTTL I+
Sbjct: 173 DELRLGEDVYVVGVTNVGKSTLINRIIKSRTGIQELITT---------SRFPGTTLDRIE 223
Query: 326 IDAFLGGGKLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSH 385
I G +L DTPG+ + A + +DL P ++ +++ + +E
Sbjct: 224 I-PLDDGAQLVDTPGIVKRDQMAHALSEKDLKFALPNHEIKPKTYQLNAEQ--------- 273
Query: 386 GLNGFTIFWGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPI 445
TIF GGL R D + +T Y +L ++ AD FY K G L P
Sbjct: 274 -----TIFIGGLARFDFVNG-ERAAVTAYFENNLMLHRTKLANADAFYDKHAGNLLQPI- 326
Query: 446 GKQKAEGWKGLDRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIR 494
A+G L+ +F +E+ SD+ +GLGWI+V P IR
Sbjct: 327 ---PAQG------NTLVMHEFRTSEK--SDLVFAGLGWITV-PAGMHIR 363
>gi|295695837|ref|YP_003589075.1| ribosome biogenesis GTPase YqeH [Kyrpidia tusciae DSM 2912]
gi|295411439|gb|ADG05931.1| ribosome biogenesis GTPase YqeH [Kyrpidia tusciae DSM 2912]
Length = 363
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 116/388 (29%), Positives = 185/388 (47%), Gaps = 56/388 (14%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKT--VLCGRCRLLSHGHMITAVGGNGG 158
C GCG LQ+ + GYV H+ VLC RC + H I
Sbjct: 4 CSGCGEELQSEDPGKAGYV---------PAHRIDEPGVLCRRCYRIIHYQEIAPAA---- 50
Query: 159 YAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKV 218
V + LR L+ ++E+AL+V++VDI+D+ G+ + + D+AG LVV K+
Sbjct: 51 -------VPPERLRGVLARAKQERALVVQVVDILDWTGTRIPDLNDVAGERQ-WLVVHKI 102
Query: 219 DLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYIL 278
DLLP+ T+++ V W ++ V+L S+ GI G+ +++ + VY +
Sbjct: 103 DLLPRETNYDRVRRWFERQLRREGFRAQRVYLASAHKGIGIPGLLADLNRVDGA--VYFM 160
Query: 279 GSANVGKSAFINALLKKMGERDPAAAMAQKYRPI-QSAVPGTTLGPIQIDAFLGGGKLYD 337
G+AN GKS+ +NAL+ AA RP+ S VPGTTL + ID G K D
Sbjct: 161 GAANTGKSSLLNALM--------GAAEISSDRPLTTSRVPGTTLNAVTIDRG-EGRKWVD 211
Query: 338 TPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGL 397
TPG+ +R + L A+ P +R + +++ ET G +I+ GGL
Sbjct: 212 TPGITAGYRVVDRLCPTCLRAVVPVQPIRPRVYSL--ET------------GQSIWLGGL 257
Query: 398 VRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLD 457
R+D+L+ + + F + + ++ +A F++K G L PP + A G+
Sbjct: 258 ARLDVLEGDRQPFVCFLSNR-VPIHRTNVLRAQPFFEKHAGKDLVPPCERCLA----GVM 312
Query: 458 RERLLEIKFEDTERPASDVAISGLGWIS 485
E K E E+ D+A++GLGW+S
Sbjct: 313 TMARTEWKLEAGEK--VDLAVAGLGWVS 338
>gi|258511984|ref|YP_003185418.1| ribosome biogenesis GTPase YqeH [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
gi|257478710|gb|ACV59029.1| ribosome biogenesis GTPase YqeH [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
Length = 396
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 106/395 (26%), Positives = 182/395 (46%), Gaps = 57/395 (14%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGAPLQ+++ PGYV + H + + VLC RC + H T +
Sbjct: 7 CVGCGAPLQSTDERMPGYV-------PESHLEREDVLCRRCFRIRHYGDFTPIA------ 53
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
V + + +++ + L++ +VD+ D GS + R ++ +I+VV KVDL
Sbjct: 54 -----VDEETYQRQVAAIFDRPGLVLYVVDVFDLAGSLIPSARRFVASSDVIVVVNKVDL 108
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LP + + DW+ + L V S++ G+ + + +E K R VY++G
Sbjct: 109 LPTDVGYEALADWIRGEVRATGVEPLDVAFISAEKRRGVDRLVDRVARETK-RPVYVIGM 167
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLG--PIQIDAFLGGGKLYDT 338
ANVGKS +NA+++++ ER ++++ PGTTL ++I+ G +L+DT
Sbjct: 168 ANVGKSTLLNAMVERLSERKQPFTVSRR--------PGTTLAMSRLEIEGPYGRVELFDT 219
Query: 339 PGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLN-GFTIFWGGL 397
PG+ R + + L + P++R+R + + LN G +F GGL
Sbjct: 220 PGLMYTSRVIERLCGDCLKWVVPRTRVRPRVYQ---------------LNPGQALFLGGL 264
Query: 398 VRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLD 457
VR++ L + Y L V+ ++AD+F+ L P + A+ + D
Sbjct: 265 VRLETLGG-ERQGIVLYVSNELPVHRTKRERADQFFADHRYDILKVPC-EACADAFA--D 320
Query: 458 RERLL-------EIKFEDTERPASDVAISGLGWIS 485
R L + F +R D+ + GLGWI+
Sbjct: 321 RRSWLVAAPPRRDADFSLGKR-GGDIVLPGLGWIA 354
>gi|218288657|ref|ZP_03492934.1| Nitric-oxide synthase [Alicyclobacillus acidocaldarius LAA1]
gi|218241314|gb|EED08489.1| Nitric-oxide synthase [Alicyclobacillus acidocaldarius LAA1]
Length = 396
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 106/395 (26%), Positives = 181/395 (45%), Gaps = 57/395 (14%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGAPLQ+++ PGYV + H + + VLC RC + H T +
Sbjct: 7 CVGCGAPLQSTDERVPGYV-------PESHLEREDVLCRRCFRIRHYGDFTPIA------ 53
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
V D +++ + L++ +VD+ D GS + R ++ +I+VV KVDL
Sbjct: 54 -----VDEDTYERQVAAIFDRPGLVLYVVDVFDLAGSLIPSARRFVASSDVIVVVNKVDL 108
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LP + + DW+ + L V S++ G+ + + +E + R VY++G
Sbjct: 109 LPADVGYEALADWIRGEVRATGVEPLDVAFISAEKRRGVDRLVDRVARETE-RPVYVIGM 167
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLG--PIQIDAFLGGGKLYDT 338
ANVGKS +NA+++++ ER ++++ PGTTL ++I+ G +L+DT
Sbjct: 168 ANVGKSTLLNAMVERLSERKQPFTVSRR--------PGTTLAMSRLEIEGPYGRVELFDT 219
Query: 339 PGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLN-GFTIFWGGL 397
PG+ R + + L + P++R+R + + LN G +F GGL
Sbjct: 220 PGLMYTSRVIERLCGDCLKWVVPRTRVRPRVYQ---------------LNPGQALFLGGL 264
Query: 398 VRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLD 457
VR++ L + Y L V+ ++AD+F+ L P + A+ + D
Sbjct: 265 VRLETLGG-ERQGIVLYVSNELPVHRTKRERADQFFADHRYDILKVPC-EACADAFA--D 320
Query: 458 RERLL-------EIKFEDTERPASDVAISGLGWIS 485
R L + F +R D+ + GLGWI+
Sbjct: 321 RRSWLVAAPPRRDADFSLGKR-GGDIVLPGLGWIA 354
>gi|441471183|emb|CCQ20938.1| Uncharacterized protein yqeH [Listeria monocytogenes]
gi|441474312|emb|CCQ24066.1| Uncharacterized protein yqeH [Listeria monocytogenes N53-1]
Length = 306
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 98/323 (30%), Positives = 150/323 (46%), Gaps = 50/323 (15%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT + D GY K + V+C RC L H + I V
Sbjct: 7 CIGCGAVIQTEDPDKIGYA-------PKSSLNNEQVICKRCFRLKHYNEIQDVA------ 53
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ L+ + ++ALIV +VDI DF+GS+L + AG+NP++LV K D+
Sbjct: 54 -----LTDDDFLRILNQISSKQALIVYVVDIFDFDGSWLPGLPRFAGSNPVLLVGNKEDV 108
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + + W+ ++ L V L S++ G + +I + + G+DVY++G
Sbjct: 109 LPKSLKRDKLTRWMRTRAKEQGLAATDVVLVSAEKGHGFDTLLEKIDELRNGQDVYVVGC 168
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS IN ++K+ + +Q PGTTL I+I G L DTPG
Sbjct: 169 TNVGKSTLINRIIKQASGENNVITTSQ--------FPGTTLDKIEI-PLADGNVLVDTPG 219
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ HH+ A + L A+ P+ ++ F + E T+F G L R+
Sbjct: 220 IINHHQMAHFIDTTTLKAITPKKEVKPAVFQLNEEQ--------------TLFLGALARL 265
Query: 401 DLLKVLPETCLTFYGPKSLQVYM 423
D + G KSL VY+
Sbjct: 266 DYVS---------GGRKSLVVYV 279
>gi|384135845|ref|YP_005518559.1| ribosome biogenesis GTPase YqeH [Alicyclobacillus acidocaldarius
subsp. acidocaldarius Tc-4-1]
gi|339289930|gb|AEJ44040.1| ribosome biogenesis GTPase YqeH [Alicyclobacillus acidocaldarius
subsp. acidocaldarius Tc-4-1]
Length = 389
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 107/393 (27%), Positives = 183/393 (46%), Gaps = 57/393 (14%)
Query: 103 GCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYAGG 162
GCGAPLQ+++ PGYV + H + + VLC RC + H T V
Sbjct: 2 GCGAPLQSTDERMPGYV-------PESHLEREDVLCRRCFRIRHYGDFTPVA-------- 46
Query: 163 KQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDLLP 222
V + + +++ + L++ +VD+ D GS + R ++ +I+VV KVDLLP
Sbjct: 47 ---VDEETYQRQVAAIFDHPGLVLYVVDVFDLAGSLIPSARRFVASSDVIVVVNKVDLLP 103
Query: 223 KGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGSAN 282
+ + DW+ + L V S++ G+ + + +E K R VY++G AN
Sbjct: 104 ADVGYEALADWIRGEVRATGVEPLDVAFISAEKRRGVDRLVDRVARETK-RPVYVMGMAN 162
Query: 283 VGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLG--PIQIDAFLGGGKLYDTPG 340
VGKS +NA+++++ ER ++++ PGTTL ++I+ G +L+DTPG
Sbjct: 163 VGKSTLLNAMVERLSERKQPFTVSRR--------PGTTLAMSRLEIEGPYGRVELFDTPG 214
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLN-GFTIFWGGLVR 399
+ R + + L + P+SR+R + + LN G +F GGLVR
Sbjct: 215 LMYTSRVIERLCGDCLKWVVPRSRVRPRVYQ---------------LNPGQALFLGGLVR 259
Query: 400 IDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
++ L+ + Y L V+ ++AD F+ + L P + A+ + +DR
Sbjct: 260 LETLEG-ERQGIVLYVSNELPVHRTKRERADSFFAEHRYDILKVPC-EACADAF--VDRR 315
Query: 460 RLL-------EIKFEDTERPASDVAISGLGWIS 485
L + F +R D+ + GLGWI+
Sbjct: 316 SWLVAAPPRRDADFSLGKR-GGDIVLPGLGWIA 347
>gi|372325415|ref|ZP_09520004.1| GTP-binding protein YqeHrequired for biogenesis of 30S ribosome
subunit [Oenococcus kitaharae DSM 17330]
gi|366984223|gb|EHN59622.1| GTP-binding protein YqeHrequired for biogenesis of 30S ribosome
subunit [Oenococcus kitaharae DSM 17330]
Length = 384
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 121/447 (27%), Positives = 192/447 (42%), Gaps = 81/447 (18%)
Query: 87 KKDKVLKVNSAVASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKT----------V 136
D++ ++ +C GCG+ QT++ D GY+ K H + +
Sbjct: 4 NNDQIQQILDEGITCIGCGSLFQTTDPDQAGYIKA------SKLHDYLAGLTSPDDPIDL 57
Query: 137 LCGRCRLLSHGHMITAVGGNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNG 196
LC RC L H + I V + + ++ LS + +KAL++ L+D+ D +G
Sbjct: 58 LCERCFKLRHYNQIQPVA-----------LESSHFQKILSAIADKKALVLYLIDLFDVSG 106
Query: 197 SFLARIRDLAGANPIILVVTKVDLLPKGTDFNCVGDWVVEATTKKKLN-VLSVHLTSSKS 255
S + I G NPI++V K D+LPK + + DW+ K+ + V ++ L++ K
Sbjct: 107 SMINGISRFIGNNPIVIVGNKADVLPKSVKKHKLADWLQREAGKQGIQAVRTIVLSADKG 166
Query: 256 LAGIVGVASEIQKEKKGRDVYILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSA 315
AG + + ++Y++G NVGKS IN ++K + + S
Sbjct: 167 DAGETLLNEIDDYLDRYPEIYVVGVTNVGKSTLINQIIKALSGKGSVITT--------SR 218
Query: 316 VPGTTLGPIQIDAFLGGGKLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISE 375
PGTTL I I + DTPG+ + VV +D L P ++ ++F + S
Sbjct: 219 FPGTTLDRIVI-PLTEKTAIIDTPGIIHASQMTHVVSPKDYKYLLPNKEIKARTFQLQS- 276
Query: 376 TETNNEFKSHGLNGFTIFWGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQK 435
G TIF+G L +D L +T Y +L ++ T+K+ +F++
Sbjct: 277 -------------GQTIFFGSLGWMDFLN-RQNISITAYFENNLMLHRGKTEKSSDFFRL 322
Query: 436 ELGVTLTPPIGKQKAEGWKGLDRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRN 495
+ G TL P + A W I E P DV ISGLGW+ + RN
Sbjct: 323 QAGKTLLPI--TESAMDW----------ISQEIKVLPGQDVVISGLGWV-------TFRN 363
Query: 496 SDINLESTSGELHLAVHVPKPVEVFVR 522
ST+ LHL PK V VR
Sbjct: 364 ------STTIRLHL----PKGVAFSVR 380
>gi|403339447|gb|EJY68983.1| hypothetical protein OXYTRI_10400 [Oxytricha trifallax]
Length = 874
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 119/439 (27%), Positives = 195/439 (44%), Gaps = 81/439 (18%)
Query: 135 TVLCGRCRLLSHGHMITAVGGN--GGYAGGKQFVSADELREKLSHLRREK---------- 182
++C RC L H + G+ YAG S L + + + R+K
Sbjct: 441 NLICQRCHNLKHHQKLIDHKGSLPSSYAG-----STTVLADHVGKMDRQKILDGVLSSIY 495
Query: 183 --ALIVKLVDIVDFNGSFLARIRDLAGA--NPIILVVTKVDLLPKGTDFNCVGDWVVEAT 238
++I+K++DI +F GS + I + + +ILVV K+D LP G + WV +
Sbjct: 496 PRSIIIKVIDITNFEGSQIDEIIEDVNQRRHRLILVVNKIDALPDGFSVLRLQKWVKDQI 555
Query: 239 TKKKLNVL--SVHLTSSKSLAGIVGVASEIQKEKKGRD-------VYILGSANVGKSAFI 289
K + + ++ +TS+++ G+ V + KK D VY++GS N GKS+FI
Sbjct: 556 DHKISDKIKYNICMTSARAATGVNKVMEILSFIKKEFDPQAYLPKVYVVGSTNSGKSSFI 615
Query: 290 NALLKKMGE-RDPAAAMAQKYRPI--QSAVPGTTLGPIQIDAFLGGGKLYDTPGV-HLHH 345
NA++ K + ++P + I +SAVPGTTL + ++ G K DTPGV +L+
Sbjct: 616 NAMIYKSNKHKEPNKIHYKSKYSILTESAVPGTTLEMVNVEDVRLGFKFLDTPGVPNLNQ 675
Query: 346 RQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRIDLLKV 405
+ V +DL L PQ ++ + S G+++F GGL R+D L
Sbjct: 676 VSSLVEDYQDLITLLPQKQMMSYPLNMRS--------------GYSVFLGGLARVDFLSG 721
Query: 406 LPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTP-----PIGKQKAEGWKGLDRER 460
+ TF L ++ P +A + +QK+ G L P P + + GL+ +
Sbjct: 722 -DDKYFTFIVAPHLTIHKTPILRAPDVFQKQAGNLLRPSYSADPDKVKFIQHEIGLNCDN 780
Query: 461 LLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVEVF 520
E F D++I GLGW S++ G +L +H+P V+
Sbjct: 781 FKEANF--------DISIEGLGWFSIQ---------------GRGFCNLMLHIPPEVKYH 817
Query: 521 VRN----PMPVGKAGAEWY 535
+RN P V G + Y
Sbjct: 818 IRNSPLMPFEVLDKGLQKY 836
>gi|281411522|ref|YP_003345601.1| ribosome biogenesis GTPase YqeH [Thermotoga naphthophila RKU-10]
gi|281372625|gb|ADA66187.1| ribosome biogenesis GTPase YqeH [Thermotoga naphthophila RKU-10]
Length = 363
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 108/426 (25%), Positives = 180/426 (42%), Gaps = 71/426 (16%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +Q + PGY+ + YE ++ + K +LC RC + H + V N +
Sbjct: 3 CPGCGAAIQFDDPKKPGYIPREVYE--RRLEEGKEILCQRCFRMKHYGKLEPVEFNWDFK 60
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++L+ L ++V ++DI DF G++ I ++ +I V+ K+DL
Sbjct: 61 --------NQLKSYLGGF----DVVVWVIDIFDFEGTYREDIAEILKGKRVIYVINKIDL 108
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LP+ + +WV + K N + + S++ G+ + + + ++G
Sbjct: 109 LPRAVTVKEIKEWVKKRIKTK--NTDDIRIVSAEKNFGLTSLVKYLSRLTD--KALVVGV 164
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS+ +N + + S PGTTLG ++ LYDTPG
Sbjct: 165 TNVGKSSLLNKIC--------------THENTISPFPGTTLGILRRKVKEANLYLYDTPG 210
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ + R ++ E + P+ L ++F NG TIF GGL R
Sbjct: 211 IMTNDRILDLLDPECQKRVLPREELSRKTF--------------KPDNGRTIFMGGLCRF 256
Query: 401 DL-LKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D+ + + K + + ++ADE + LG L PP K K E +K RE
Sbjct: 257 DIHFETEKNPIFLLFSSKEVTFHETKRERADELMRNRLGDLLIPPCSKTKFENFK-WKRE 315
Query: 460 RLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVEV 519
T + ++A++GLGW+S VRR G + V VP V++
Sbjct: 316 TF-------TLKEGEELAVAGLGWMS---VRR-------------GPFTVEVTVPDSVKL 352
Query: 520 FVRNPM 525
VR +
Sbjct: 353 VVREAL 358
>gi|281203403|gb|EFA77603.1| hypothetical protein PPL_12209 [Polysphondylium pallidum PN500]
Length = 565
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 105/410 (25%), Positives = 174/410 (42%), Gaps = 118/410 (28%)
Query: 138 CGRCRLLSHGHMITAVGGNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGS 197
C RC +L H + + + +E R KLS ++ ++VK+VDI+DF+G+
Sbjct: 230 CQRCHMLKHYGKVVPIK-----------IPVEEFRHKLSPIKDMNCVVVKVVDIMDFHGT 278
Query: 198 FLARIRDLAGANPIILVVTKVDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLA 257
F+ R + G NP+ILV K+D+LP N + DW+ + + V V L SS S
Sbjct: 279 FVENFRKIIGNNPVILVGNKMDVLPADIHRNRIEDWLRRECKLRGMVVSHVTLLSSASRD 338
Query: 258 GIVGVASEIQKEKKGRDVYILGSANVGKSAFINALLKKMGER-----------------D 300
GI E++K ++GRDV+++G +NVGKS F+NAL+ + E+ +
Sbjct: 339 GIAKFIVELEKLRRGRDVFVVGCSNVGKSTFLNALVDEYREKVIFNENEQGNSGSSNNNN 398
Query: 301 PAAAMAQKYRPIQSAVPGTTLGPIQI-----DAFLGGGKLYDTPGVHLHHRQAAVVHAED 355
A + R S PGTTL I + FLGG D G
Sbjct: 399 NQAKPSALERATTSIFPGTTLNIISVPLWSKSIFLGGLARIDYQG--------------- 443
Query: 356 LPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRIDLLKVLPETCLTFYG 415
GL FT++ + + + K
Sbjct: 444 ------------------------------GLATFTVYVSNHLPVHICK----------- 462
Query: 416 PKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRERLLEIK-FE------D 468
T+KAD ++++ G L+PP+ + + + + + +L ++K F D
Sbjct: 463 ----------TEKADALFERQRGKLLSPPLTEDQ-DRFDNDESIKLTQVKRFTITPEKID 511
Query: 469 TERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVE 518
+ SD+ ISGLGWI+++P+ S++ + + VH PK ++
Sbjct: 512 FKHTHSDIVISGLGWIAIKPLSTSLQ-----------PMKITVHTPKGID 550
>gi|418621384|ref|ZP_13184160.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU123]
gi|419769637|ref|ZP_14295731.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus IS-250]
gi|374829328|gb|EHR93132.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU123]
gi|383358256|gb|EID35717.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus IS-250]
Length = 288
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 100/336 (29%), Positives = 165/336 (49%), Gaps = 50/336 (14%)
Query: 191 IVDFNGSFLARIRDLAGANPIILVVTKVDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHL 250
+ DF GSF+ I+ + G IILV K+DLLPK + V +W+ ++ K L V L
Sbjct: 1 MFDFEGSFINAIQRIVGNKKIILVANKIDLLPKQINHRRVKEWLRKSARKYGLEAEDVVL 60
Query: 251 TSSKSLAGIVGVASEIQKEKKGRDVYILGSANVGKSAFINALLKK-MGERDPAAAMAQKY 309
S+ GI + I + DVYI+G+ NVGKS IN L+++ +GE+D
Sbjct: 61 ISANKGWGIDELLQSINHVRNKDDVYIVGTTNVGKSTLINKLIEQSVGEKDVVTT----- 115
Query: 310 RPIQSAVPGTTLGPIQIDAFLGGGKLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQS 369
S PGTTL I I ++DTPG+ H+ V +L + P++ ++ +
Sbjct: 116 ----SRFPGTTLDMIDI-PLDEKSFMFDTPGIIQSHQMTNYVSENELKIIIPKNEIKQRV 170
Query: 370 FAVISETETNNEFKSHGLNGFTIFWGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKA 429
+ + NE + T+F+GGL RID + + F+ L ++ T+KA
Sbjct: 171 YQL-------NEKQ-------TLFFGGLARIDYVSGGKRPLVCFFS-NDLNIHRTKTEKA 215
Query: 430 DEFYQKELGVTLTPPIGKQKAEGWKGLDRERLLEIKFEDTERPASDVAISGLGWISVEPV 489
++ ++ +LG L+PP Q A+ + L+ + + ++ T+R D+ ISGLG+I+++
Sbjct: 216 NDLWKSQLGALLSPP---QDAQQF-NLNDVKAVRLETGKTKR---DIMISGLGFITIDAG 268
Query: 490 RRSIRNSDINLESTSGELHLAVHVPKPVEVFVRNPM 525
+ I V VPK V+V +RN +
Sbjct: 269 AKVI-----------------VRVPKHVDVILRNSI 287
>gi|291000866|ref|XP_002683000.1| GTP-binding protein [Naegleria gruberi]
gi|284096628|gb|EFC50256.1| GTP-binding protein [Naegleria gruberi]
Length = 677
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 134/525 (25%), Positives = 235/525 (44%), Gaps = 109/525 (20%)
Query: 66 ELQKAKEAAKVVVRDSKKKRKKKDKVLKVNSAVASCYGC-GAPLQTSESDAPGY--VDPD 122
E+QK + + V+++ ++ + K++ + A+++ +P+ ++ G+ +D D
Sbjct: 177 EMQKLELEKQRVLKEKVQEMQDKNEGMTEEEAISTIENVRNSPVGKNQPPPEGFLVMDMD 236
Query: 123 TYELKKK--HHQFKT-----------VLCGRCRLLSHGHMITAVGGNGGYAGGKQFVSAD 169
+ L KK H+ KT ++C RC L + + + V + +A
Sbjct: 237 EFNLYKKFLKHKGKTSQQLIDESLSELVCQRCHQLRNYGVYSTVQVDQE--------AAR 288
Query: 170 ELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVV-TKVDLLPKGTD-- 226
++ E++S L++ KALI+ ++D+ D +GS + +D+ G++ +LVV KVDLL KG
Sbjct: 289 QVFERISQLKK-KALIIYVIDLFDTHGSIIPNFKDIIGSHHNVLVVANKVDLLLKGRSSY 347
Query: 227 ---------------FNCVGDWVVEA---------TTKKKLNVLSVHLTSSKSLAGIVGV 262
+ + +WV TT+++ ++ + + SS + + +
Sbjct: 348 DRRPDTEKERTKALIYRRLEEWVRRILKKDFELFLTTEERSQLVGIEVVSSTTGTNMKQL 407
Query: 263 ASEIQKEKKGRDVYILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLG 322
++ +KG DVY++G NVGKS FIN L K+ E + S +PGTTL
Sbjct: 408 HEKMNSYRKGGDVYVIGCTNVGKSTFINQLFKQQYESRKSNISI-----TTSTLPGTTLK 462
Query: 323 PIQIDAFLGGGK---LYDTPGVHLHHRQ--AAVVHAEDLPALAPQSRLRGQSFAVISETE 377
I G+ L+DTPGV H++ + ED + P + F +
Sbjct: 463 TISFPITTATGERANLFDTPGVLNQHQKLFTDYLKYEDWKYIIPDGDVIDPRFVRLRP-- 520
Query: 378 TNNEFKSHGLNGFTIFWGGLVRIDLLK--VLPET---CL-TFYGPKSLQVYMVPTDKADE 431
G F GL R+D ++ V E C+ + + L ++ +KADE
Sbjct: 521 -----------GRCFFLSGLFRLDYIEDNVQNEDWNRCIFSVFTSSRLSIHCTGIEKADE 569
Query: 432 FYQKELGVTLT------PPIGKQKAEGWKGLDRERLLEIKFEDTERPAS--DVAISGLGW 483
FY+K +G T PPI + + + GL++ L+ K T R S D+ I G+GW
Sbjct: 570 FYEKHVGRNATPEYQIVPPIDGKDSLIY-GLNKS--LKFKVNGTTRRESILDICIGGIGW 626
Query: 484 ISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVEVFVRNP--MP 526
IS+ V GE+ VH + V+V++R P MP
Sbjct: 627 ISITGV---------------GEMTFEVHTNEHVQVYLRQPCLMP 656
>gi|108951287|gb|ABG25037.1| nitric oxide synthase [Solanum lycopersicum]
Length = 98
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 66/87 (75%), Positives = 75/87 (86%)
Query: 89 DKVLKVNSAVASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGH 148
D + K++ CYGCGAPL TSE DAPGYVD +TYELKKKHHQ + +LCGRCRLLSHGH
Sbjct: 12 DNIFKISKLAPCCYGCGAPLHTSEVDAPGYVDQETYELKKKHHQLRKILCGRCRLLSHGH 71
Query: 149 MITAVGGNGGYAGGKQFVSADELREKL 175
MITAVGGNGGY+GGKQFV+A+ELREKL
Sbjct: 72 MITAVGGNGGYSGGKQFVTAEELREKL 98
>gi|168011635|ref|XP_001758508.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690118|gb|EDQ76486.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 456
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 118/433 (27%), Positives = 201/433 (46%), Gaps = 72/433 (16%)
Query: 101 CYGCGAPLQTSESDAPGYV--------DPDTYE-----------------LKKKHHQFKT 135
C GCG +Q ++ PGY D +E + + K
Sbjct: 1 CPGCGVYMQDTDPKRPGYFKMPANFGKSDDEFEENVVGGMEEDESEEFSDDDDEEEEEKV 60
Query: 136 VLCGRCRLL-SHGHMITAVGGNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDF 194
V+C RC L ++G + N F R K ++ RR A+++ +VD DF
Sbjct: 61 VVCARCHALRNYGKVKDESVEN--LLPDFDFERVVGARLKKAYGRR--AVVLMVVDGSDF 116
Query: 195 NGSFLARIRDL----------------AGANPIILVV-TKVDLLPKGTDFNCVGDWVVEA 237
+GSF + ++ +G P +LVV K+DLLPK N + WV
Sbjct: 117 DGSFPRKAAEVLAEADEELGTAWQEGKSGNTPRLLVVMNKIDLLPKQISANRLEQWVRRR 176
Query: 238 TTKKKLN-VLSVHLTSSKSLAGIVGVASEIQKEKKGR-DVYILGSANVGKSAFINALLKK 295
+ + + VH S+ GI +A I++ R D +++G+ N GKS+ IN+L K
Sbjct: 177 SKAGGVTRIAGVHTVSAFKGWGIEQLADHIKQLAGPRGDCWVVGAQNAGKSSLINSLAKF 236
Query: 296 MGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFL-GGGKLYDTPGVHLHHRQAAVVHAE 354
GE+ A+ + +AVPGTTLG ++++ L +L+DTPG+ H+ + ++ E
Sbjct: 237 AGEKRRVTALTE------AAVPGTTLGVLKLEGILPARARLFDTPGLIHPHQLSTKLNRE 290
Query: 355 DLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRIDLLKVLPETC-LTF 413
+L + + L+ ++F V G T+ GL+R+D+++ E+ +T
Sbjct: 291 ELKLVEVRKELKPRTFRVKV--------------GSTVHVAGLLRLDVMEAPSESIYVTV 336
Query: 414 YGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRERLLEIKFEDTERPA 473
+ L +M T+KA+E ++K LG L PP+ K++A G R + + + E +
Sbjct: 337 WASALLSCHMGKTEKAEELFEKHLGDRLAPPVDKERAAE-IGRWVARRVTVTGDSWEHSS 395
Query: 474 SDVAISGLGWISV 486
DVA++GLGW+ +
Sbjct: 396 VDVAVAGLGWVGI 408
>gi|15643611|ref|NP_228657.1| hypothetical protein TM0848 [Thermotoga maritima MSB8]
gi|403252589|ref|ZP_10918898.1| hypothetical protein EMP_02399 [Thermotoga sp. EMP]
gi|418044982|ref|ZP_12683078.1| ribosome biogenesis GTPase YqeH [Thermotoga maritima MSB8]
gi|4981381|gb|AAD35930.1|AE001751_10 conserved hypothetical protein [Thermotoga maritima MSB8]
gi|351678064|gb|EHA61211.1| ribosome biogenesis GTPase YqeH [Thermotoga maritima MSB8]
gi|402812079|gb|EJX26559.1| hypothetical protein EMP_02399 [Thermotoga sp. EMP]
Length = 363
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 107/426 (25%), Positives = 179/426 (42%), Gaps = 71/426 (16%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +Q + PGY+ + +E K+ + K +LC RC + H + V + +
Sbjct: 3 CPGCGAAIQFDDPKKPGYIPREVFE--KRLEEGKEILCQRCFRMKHYGKLEPVEFDWDFK 60
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++L+ L ++V ++DI DF G++ I ++ +I V+ K+DL
Sbjct: 61 --------NQLKSYLGGF----DVVVWVIDIFDFEGTYREDIAEILKGKRVIYVINKIDL 108
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LP+ + +WV + K N + + S++ G+ + + + ++G
Sbjct: 109 LPRAVTVKEIKEWVKKRIKTK--NTDDIRIVSAEKNFGLTSLVKYLSRLTD--KALVVGV 164
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS+ +N + + S PGTTLG ++ LYDTPG
Sbjct: 165 TNVGKSSLLNKIC--------------THENTISPFPGTTLGILKRKVKEANLYLYDTPG 210
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ R ++ E + P+ L ++F NG TIF GGL R
Sbjct: 211 IMTSDRILDLLDPECQKRVLPREELSRKTF--------------KPDNGRTIFMGGLCRF 256
Query: 401 DL-LKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D+ + + K + + ++ADE + LG L PP K K E +K RE
Sbjct: 257 DIHFETEKNPIFLLFSSKEVTFHETRRERADELMRNRLGDLLIPPCSKTKFENFK-WKRE 315
Query: 460 RLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVEV 519
T + ++A++GLGW+S VRR G + V VP V++
Sbjct: 316 TF-------TLKEGEELAVAGLGWMS---VRR-------------GPFTVEVTVPDSVKL 352
Query: 520 FVRNPM 525
VR +
Sbjct: 353 VVREAL 358
>gi|308805346|ref|XP_003079985.1| Predicted GTPases (ISS) [Ostreococcus tauri]
gi|116058442|emb|CAL53631.1| Predicted GTPases (ISS) [Ostreococcus tauri]
Length = 519
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 120/453 (26%), Positives = 203/453 (44%), Gaps = 91/453 (20%)
Query: 99 ASCYGCGAPLQTSESDAPG-YVDP---------------------------DTYELKKKH 130
++C GCG LQ +++APG YV P D + + K
Sbjct: 8 SACPGCGVGLQDVDANAPGFYVTPKKMLAAADADADADAEDEEAFDLAPLVDAEDAEAKL 67
Query: 131 HQFK----------------------TVLCGRCRLLSHGHMITAVGGNGGYAGGKQFVSA 168
F ++C RC L + AG S
Sbjct: 68 DAFNALFDEDDEGTKRRAKKKKKGPPVIVCARCFALRTSGRVK------NEAGESLLPSF 121
Query: 169 DELR---EKLSHLR-REKALIVKLVDIVDFNGSFLARIRDL------AGANPIILVVTKV 218
D R ++ + LR + A+++ +VD++D++GSF D+ G ++LV KV
Sbjct: 122 DFERVIGDRFNRLREKNSAVVLLMVDLIDYDGSFPVDAVDVIEPYVQKGVLEVLLVANKV 181
Query: 219 DLLPKGTDFNCVGDWVVEATTKKKLNVLS-VHLTSSKSLAGIVGVASEIQKE-KKGRDVY 276
DL+P + +V + + L+ S VHL S+K+ G+ +A+++++ +G++VY
Sbjct: 182 DLMPAQCTRTRLTSFVRQRSKDFGLSRCSGVHLVSAKAGMGMEILANQLEEMLDRGKEVY 241
Query: 277 ILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFL-GGGKL 335
++G+ N GKS+ IN L K + PI S +PGTTLG +++ + L G +
Sbjct: 242 VVGAQNAGKSSLINRLSSKY-----GGPGEEDGGPIASPLPGTTLGMVKLASLLPNGSDV 296
Query: 336 YDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWG 395
YDTPG+ + +A + E++ + P RL +++ + G TI G
Sbjct: 297 YDTPGLLQPFQLSARLTGEEMKMVLPNKRLTPRTYRIQV--------------GGTIHIG 342
Query: 396 GLVRIDLLKVLPETC-LTFYGPKSLQV-YMVPTDKADEFYQKELGVTLTPPIGKQKAEGW 453
L RIDLL+ T LT + + Y AD F +K G +TPP+G+++ + +
Sbjct: 343 ALARIDLLESPQRTLYLTVWASNKVPTHYSTSAKAADTFLEKHAGTKMTPPLGQERMQQF 402
Query: 454 KGLDRERLLEIKFEDTERPASDVAISGLGWISV 486
G RL+ + ED ++ D++I+GL WI V
Sbjct: 403 -GQWGSRLVNVYGEDWQKSTRDISIAGLCWIGV 434
>gi|403743307|ref|ZP_10952921.1| ribosome biogenesis GTPase YqeH [Alicyclobacillus hesperidum
URH17-3-68]
gi|403122830|gb|EJY57022.1| ribosome biogenesis GTPase YqeH [Alicyclobacillus hesperidum
URH17-3-68]
Length = 409
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 107/397 (26%), Positives = 184/397 (46%), Gaps = 55/397 (13%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRC-RLLSHGHMITAVGGNGGY 159
C GCGAPLQ+++ D PGYV P++ K VLC RC R+ +G + Y
Sbjct: 16 CLGCGAPLQSTDEDKPGYV-PESAVGKPD------VLCRRCFRIRHYGEFLPVTVDESTY 68
Query: 160 AGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVD 219
+++ + L++ +VD+ D GS + + + +++VV KVD
Sbjct: 69 QA------------QVAQIFERPGLVLYVVDVFDLAGSLVPNLARFVLNSEVVVVVNKVD 116
Query: 220 LLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILG 279
LLP+ + + DW+ E + ++ V V S++ GI V ++ E + R VY++G
Sbjct: 117 LLPERVQYTRLADWIREQVERTRVPVSDVLFVSAEKQLGIEQVLGLVEWETE-RPVYVVG 175
Query: 280 SANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLG--PIQIDAFLGGGKLYD 337
AN GKS +NA+ ++ ++ ++++ PGTTL ++I G +LYD
Sbjct: 176 MANTGKSTLLNAIAGRLSDKKAPYTVSRR--------PGTTLALSRLEITGRHGRIELYD 227
Query: 338 TPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGL 397
TPG+ R + + L + PQSRLR + + + E T+F GG+
Sbjct: 228 TPGLVHEARVIERLCVDCLRIVVPQSRLRPRVYQLNPEQ--------------TLFLGGI 273
Query: 398 VRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLD 457
VR+D + + + Y L V+ +ADE +++ L P + + +
Sbjct: 274 VRLDFERGDRQP-IVLYVANDLPVHRTKLSRADEIWERHQDDILQVPCAACRPD-FANRR 331
Query: 458 RERLLEIKF-EDTERPA-------SDVAISGLGWISV 486
RL ++ E + R + SD+ I GLGWI++
Sbjct: 332 SIRLQRVRRGEPSARGSLAISGRGSDIVIPGLGWIAL 368
>gi|449015954|dbj|BAM79356.1| similar to GTP-binding protein [Cyanidioschyzon merolae strain 10D]
Length = 674
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 111/409 (27%), Positives = 195/409 (47%), Gaps = 60/409 (14%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQ--FKTVLCGRCRLLSHGHMITAVGGNGG 158
C GCGA LQ + DAPGY+ K ++ + + +C RC L+H I+A
Sbjct: 251 CPGCGAHLQDDDPDAPGYLPARALRPKGQNAEKPLTSKVCQRCFHLTHYSKISA------ 304
Query: 159 YAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGA-NPIILVVTK 217
G +S ++ RE L+ L +++A++V ++DI+D + S L + LA A +P+++V+ K
Sbjct: 305 --KGLTLMSPEQFREILAPLAKQRAVVVCMLDILDLSSSMLKEVSQLANAQSPVLVVINK 362
Query: 218 VDLLPKGTDFNCVGDWVVE--ATTKKKLNVLSVHLTSSKSLAGIVGVASEI---QKEKKG 272
DLLP + W+ + A + + +V+L S++ GI G + +E +
Sbjct: 363 ADLLPSSVKLGHIMQWIWKRCAASGMRRRPRAVYLISAERGLGIRGFVQGLVAAARESRT 422
Query: 273 RDVYILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQI---DAF 329
+YI+G+ANVGKS +N +++ P S VPGTTLG +++ +A
Sbjct: 423 DHIYIMGAANVGKSTLLNRIIRG----HPGHGSKPTRELTTSVVPGTTLGMVRLPLKNAA 478
Query: 330 LGGG-KLYDTPGVHLHHRQAAVVHAED---LPALAPQSRLRGQSFAVISETETNNEFKSH 385
G + DTPG+ + R+ ++ ED + + P+ RLRG ++ +
Sbjct: 479 TGERIVIMDTPGI-VEPRRVNLLCLEDISEMKGILPRRRLRGITYRL------------- 524
Query: 386 GLNGFTIFWGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKA-DEFYQKELGVTLTPP 444
G +++ GGLV I L + P T Y + + V++ KA +E Y+ +
Sbjct: 525 -EQGKSLWLGGLVNIALAEGKP-WFFTAYVSEQVTVHVSDASKALNETYRVQ-------- 574
Query: 445 IGKQKAEGWKGLDRERL-------LEIKFEDTERPASDVAISGLGWISV 486
+ W G R L + ++ +R +D+ I GLGW+++
Sbjct: 575 -SVKNGLLWPGGLRVPLATVEPVRMCVEHGTWKRTCADIVIPGLGWVAL 622
>gi|419859605|ref|ZP_14382259.1| GTP-binding protein YqeH [Oenococcus oeni DSM 20252 = AWRIB129]
gi|410496622|gb|EKP88105.1| GTP-binding protein YqeH [Oenococcus oeni DSM 20252 = AWRIB129]
Length = 385
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 101/405 (24%), Positives = 187/405 (46%), Gaps = 55/405 (13%)
Query: 88 KDKVLKVNSAVASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTV------LCGRC 141
+D+V ++ + C GCGA Q+++ PGY++ ++L+ +V LC RC
Sbjct: 5 EDQVTQLLNDGIVCIGCGARFQSTKRGVPGYLNE--HKLRSYLSSLNSVDDPINLLCERC 62
Query: 142 RLLSHGHMITAVGGNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLAR 201
L + + I V +D ++ L+ + +KAL++ LVD+ D GS +
Sbjct: 63 FKLKNYNQIEPVA-----------FDSDHFQKILTSISDKKALVLYLVDLFDVGGSMING 111
Query: 202 IRDLAGANPIILVVTKVDLLPKGTDFNCVGDWVVEATTKKKLNVL-SVHLTSSKSLAGIV 260
+ G NP++LV K D+LPK N + +W+ + + + VL +V L++ K +G
Sbjct: 112 LTRFIGNNPVVLVGNKFDILPKSVKKNKIANWLTKEAKNEGIKVLKTVVLSADKGDSGQY 171
Query: 261 GVASEIQKEKKGRDVYILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTT 320
+ + +++++G NVGKS IN ++K++ R S PGTT
Sbjct: 172 LLEEISDYIDEYEEIFVVGVTNVGKSTLINQIIKQISGRGSVITT--------SRFPGTT 223
Query: 321 LGPIQIDAFLGGGKLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNN 380
L I+I ++ DTPG+ + A + ++D L P ++ + +
Sbjct: 224 LDKIEI-PLTEKTRVIDTPGIIHDSQMAHFIDSKDFKYLLPNKEVKAGTLQLSK------ 276
Query: 381 EFKSHGLNGFTIFWGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVT 440
G IF GL ID L + +T Y +++++ + A++ + + G
Sbjct: 277 --------GQAIFLAGLGWIDFLNK-SKISVTAYFENNIELHRGKIENAEKLFSSQAGRL 327
Query: 441 LTPPIGKQKAEGWKGLDRERLLEIKFEDTERPASDVAISGLGWIS 485
L P + K+ ++ L+++ EIK + + D AI+GLGW +
Sbjct: 328 LKPTVLKE----YRELEKK---EIKLKSNQ----DFAIAGLGWFT 361
>gi|421186412|ref|ZP_15643805.1| GTP-binding protein YqeH [Oenococcus oeni AWRIB418]
gi|399967365|gb|EJO01847.1| GTP-binding protein YqeH [Oenococcus oeni AWRIB418]
Length = 385
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 102/405 (25%), Positives = 186/405 (45%), Gaps = 55/405 (13%)
Query: 88 KDKVLKVNSAVASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTV------LCGRC 141
+D+V ++ + C GCGA Q+++ PGY++ ++L +V LC RC
Sbjct: 5 EDQVTQLLNDGIVCIGCGARFQSTKRGVPGYLNE--HKLCSYLSSLNSVDDPINLLCERC 62
Query: 142 RLLSHGHMITAVGGNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLAR 201
L + + I V +D ++ L+ + +KAL++ LVD+ D GS +
Sbjct: 63 FKLKNYNQIEPVA-----------FDSDHFQKILTSISDKKALVLYLVDLFDVGGSMING 111
Query: 202 IRDLAGANPIILVVTKVDLLPKGTDFNCVGDWVVEATTKKKLNVL-SVHLTSSKSLAGIV 260
+ G NP++LV K D+LPK N + +W+ + + + VL +V L++ K +G
Sbjct: 112 LTRFIGNNPVVLVGNKFDILPKSVKKNKIANWLTKEAKNEGIKVLKTVVLSADKGDSGQY 171
Query: 261 GVASEIQKEKKGRDVYILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTT 320
+ + +++++G NVGKS IN ++K++ R S PGTT
Sbjct: 172 LLEEISDYIDEYEEIFVVGVTNVGKSTLINQIIKQISGRGSVITT--------SRFPGTT 223
Query: 321 LGPIQIDAFLGGGKLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNN 380
L I+I ++ DTPG+ + A + ++D L P ++ ++ +
Sbjct: 224 LDKIEI-PLTEKTRVIDTPGIIHDSQMAHFIDSKDFKYLLPNKEVKARTLQLSK------ 276
Query: 381 EFKSHGLNGFTIFWGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVT 440
G IF GL ID L + +T Y +++++ + A++ + + G
Sbjct: 277 --------GQAIFLAGLGWIDFLNK-SKISVTAYFENNIELHRGKIENAEKLFSSQAGRL 327
Query: 441 LTPPIGKQKAEGWKGLDRERLLEIKFEDTERPASDVAISGLGWIS 485
L P + K+ ++ L+++ EIK + D AISGLGW +
Sbjct: 328 LKPTVLKE----YRELEKK---EIKL----KANQDFAISGLGWFT 361
>gi|170287886|ref|YP_001738124.1| HSR1-like GTP-binding protein [Thermotoga sp. RQ2]
gi|170175389|gb|ACB08441.1| GTP-binding protein HSR1-related [Thermotoga sp. RQ2]
Length = 363
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 109/427 (25%), Positives = 180/427 (42%), Gaps = 73/427 (17%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +Q + PGY+ + YE ++ + K +LC RC + H + V + +
Sbjct: 3 CPGCGAAIQFDDPKKPGYIPREVYE--RRLEEGKEILCQRCFRMKHYGKLEPVEFDWDFK 60
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++L+ L ++V ++DI DF G++ I ++ ++ + K+DL
Sbjct: 61 --------NQLKSYLGGF----DVVVWVIDIFDFEGTYREDIVEILEGKRVVYAINKIDL 108
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRD-VYILG 279
LPK + +WV KK++ V + S G+ S ++ + D ++G
Sbjct: 109 LPKAITVKEIKEWV-----KKRIKVKNTDDIRIVSAEKNFGLNSLVKYLSRLTDKALVVG 163
Query: 280 SANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS+ +N + + S PGTTLG ++ LYDTP
Sbjct: 164 VTNVGKSSLLNKIC--------------THENTISPFPGTTLGILRRKVKEANLYLYDTP 209
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ + R ++ E + P+ L ++F NG TIF GGL R
Sbjct: 210 GIMTNDRILDLLDPECQKRVLPREELSRKTF--------------KPDNGRTIFMGGLCR 255
Query: 400 IDL-LKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDR 458
D+ + + K + + ++ADE + LG L PP K K E +K R
Sbjct: 256 FDIHFETEKNPIFLLFSSKEVTFHETKRERADELMRNRLGDLLIPPCSKTKFENFK-WKR 314
Query: 459 ERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVE 518
E T + ++A++GLGW+S VRR G + V VP V+
Sbjct: 315 ETF-------TLKEGEELAVAGLGWMS---VRR-------------GPFTVVVTVPDNVK 351
Query: 519 VFVRNPM 525
+ VR +
Sbjct: 352 LVVREAL 358
>gi|118586522|ref|ZP_01543965.1| GTP-binding protein [Oenococcus oeni ATCC BAA-1163]
gi|118433026|gb|EAV39749.1| GTP-binding protein [Oenococcus oeni ATCC BAA-1163]
Length = 497
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 102/405 (25%), Positives = 186/405 (45%), Gaps = 55/405 (13%)
Query: 88 KDKVLKVNSAVASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTV------LCGRC 141
+D+V ++ + C GCGA Q+++ PGY++ ++L +V LC RC
Sbjct: 5 EDQVTQLLNDGIVCIGCGARFQSTKRGVPGYLNE--HKLCSYLSSLNSVDDPINLLCERC 62
Query: 142 RLLSHGHMITAVGGNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLAR 201
L + + I V +D ++ L+ + +KAL++ LVD+ D GS +
Sbjct: 63 FKLKNYNQIEPVA-----------FDSDHFQKILTSISDKKALVLYLVDLFDVGGSMING 111
Query: 202 IRDLAGANPIILVVTKVDLLPKGTDFNCVGDWVVEATTKKKLNVL-SVHLTSSKSLAGIV 260
+ G NP++LV K D+LPK N + +W+ + + + VL +V L++ K +G
Sbjct: 112 LTRFIGNNPVVLVGNKFDILPKSVKKNKIANWLTKEAKNEGIKVLKTVVLSADKGDSGQY 171
Query: 261 GVASEIQKEKKGRDVYILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTT 320
+ + +++++G NVGKS IN ++K++ R S PGTT
Sbjct: 172 LLEEISDYIDEYEEIFVVGVTNVGKSTLINQIIKQISGRGSVITT--------SRFPGTT 223
Query: 321 LGPIQIDAFLGGGKLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNN 380
L I+I ++ DTPG+ + A + ++D L P ++ ++ +
Sbjct: 224 LDKIEI-PLTEKTRVIDTPGIIHDSQMAHFIDSKDFKYLLPNKEVKARTLQLSK------ 276
Query: 381 EFKSHGLNGFTIFWGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVT 440
G IF GL ID L + +T Y +++++ + A++ + + G
Sbjct: 277 --------GQAIFLAGLGWIDFLNK-SKISVTAYFENNIELHRGKIENAEKLFSSQAGRL 327
Query: 441 LTPPIGKQKAEGWKGLDRERLLEIKFEDTERPASDVAISGLGWIS 485
L P + K+ ++ L+++ EIK + D AISGLGW +
Sbjct: 328 LKPTVLKE----YRELEKK---EIKL----KANQDFAISGLGWFT 361
>gi|406671275|ref|ZP_11078514.1| ribosome biogenesis GTPase YqeH [Facklamia hominis CCUG 36813]
gi|405580525|gb|EKB54584.1| ribosome biogenesis GTPase YqeH [Facklamia hominis CCUG 36813]
Length = 374
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 106/395 (26%), Positives = 167/395 (42%), Gaps = 50/395 (12%)
Query: 95 NSAVASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVG 154
+ A C GCGA +QT D GY+ + KK + C RC L H + ++ +
Sbjct: 6 HQAGYQCIGCGALIQTESPDRFGYLPASAF---KKGLEKGDFYCQRCFRLRHYNELSDLE 62
Query: 155 GNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILV 214
+ D +KL + ++ALI+ ++DI D GS L + L G + II++
Sbjct: 63 -----------LDEDFFLDKLRKITDDQALIIHVIDIFDIEGSLLTSLPRLLGQDNIIVI 111
Query: 215 VTKVDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRD 274
KVDLLPK + + + W+++ L V L S K GI G+ I + RD
Sbjct: 112 ANKVDLLPKSVNRSRLTHWLMQYIRSLGLKPKQVILASGKQANGIEGLVEVINHFIQDRD 171
Query: 275 VYILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGK 334
+Y++G NVGKS +N L++ G + PGTTL I+I G
Sbjct: 172 IYLVGITNVGKSTLLNRLIQHYGGDQEVITTSNH--------PGTTLDLIRIPLSEEYG- 222
Query: 335 LYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFW 394
L DTPG + A + + PQ ++ + F + + T+F
Sbjct: 223 LVDTPGFVKKDQWAHYLSRRSYGQVIPQKPIKPRVFQLNPKQ--------------TLFL 268
Query: 395 GGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKA--EG 452
GL +ID ++ T L ++ +KA +FY+ L PP K+++
Sbjct: 269 AGLCQIDFVEG-ERTSFILNVANDLYLHRSKLEKAADFYKAHCDDLLMPPTAKERSLIPQ 327
Query: 453 WKGLDRERLLEIKFEDTERPASDVAISGLGWISVE 487
W+ T + D+ I GLGWI+V
Sbjct: 328 WQA----------HHLTVKSDQDLVIPGLGWIAVN 352
>gi|116490944|ref|YP_810488.1| GTP-binding protein YqeH [Oenococcus oeni PSU-1]
gi|290890418|ref|ZP_06553493.1| hypothetical protein AWRIB429_0883 [Oenococcus oeni AWRIB429]
gi|419758907|ref|ZP_14285219.1| GTP-binding protein YqeH [Oenococcus oeni AWRIB304]
gi|419857813|ref|ZP_14380516.1| GTP-binding protein YqeH [Oenococcus oeni AWRIB202]
gi|421185344|ref|ZP_15642755.1| GTP-binding protein YqeH [Oenococcus oeni AWRIB318]
gi|421188821|ref|ZP_15646153.1| GTP-binding protein YqeH [Oenococcus oeni AWRIB419]
gi|421189610|ref|ZP_15646924.1| GTP-binding protein YqeH [Oenococcus oeni AWRIB422]
gi|421190931|ref|ZP_15648215.1| GTP-binding protein YqeH [Oenococcus oeni AWRIB548]
gi|421195410|ref|ZP_15652618.1| GTP-binding protein YqeH [Oenococcus oeni AWRIB568]
gi|421197523|ref|ZP_15654698.1| GTP-binding protein YqeH [Oenococcus oeni AWRIB576]
gi|116091669|gb|ABJ56823.1| Predicted GTPase [Oenococcus oeni PSU-1]
gi|290479814|gb|EFD88463.1| hypothetical protein AWRIB429_0883 [Oenococcus oeni AWRIB429]
gi|399904362|gb|EJN91818.1| GTP-binding protein YqeH [Oenococcus oeni AWRIB304]
gi|399964154|gb|EJN98808.1| GTP-binding protein YqeH [Oenococcus oeni AWRIB419]
gi|399964525|gb|EJN99166.1| GTP-binding protein YqeH [Oenococcus oeni AWRIB318]
gi|399972700|gb|EJO06899.1| GTP-binding protein YqeH [Oenococcus oeni AWRIB422]
gi|399973627|gb|EJO07792.1| GTP-binding protein YqeH [Oenococcus oeni AWRIB548]
gi|399975132|gb|EJO09200.1| GTP-binding protein YqeH [Oenococcus oeni AWRIB576]
gi|399975835|gb|EJO09870.1| GTP-binding protein YqeH [Oenococcus oeni AWRIB568]
gi|410497284|gb|EKP88759.1| GTP-binding protein YqeH [Oenococcus oeni AWRIB202]
Length = 385
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 101/405 (24%), Positives = 186/405 (45%), Gaps = 55/405 (13%)
Query: 88 KDKVLKVNSAVASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTV------LCGRC 141
+D+V ++ + C GCGA Q+++ PGY++ ++L+ +V LC RC
Sbjct: 5 EDQVTQLLNDGIVCIGCGARFQSTKRGVPGYLNE--HKLRSYLSSLNSVDDPINLLCERC 62
Query: 142 RLLSHGHMITAVGGNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLAR 201
L + + I V +D ++ L+ + +KAL++ LVD+ D GS +
Sbjct: 63 FKLKNYNQIEPVA-----------FDSDHFQKILTSISDKKALVLYLVDLFDVGGSMING 111
Query: 202 IRDLAGANPIILVVTKVDLLPKGTDFNCVGDWVVEATTKKKLNVL-SVHLTSSKSLAGIV 260
+ G NP++LV K D+LPK N + +W+ + + + VL +V L++ K +G
Sbjct: 112 LTRFIGNNPVVLVGNKFDILPKSVKKNKIANWLTKEAKNEGIKVLKTVVLSADKGDSGQY 171
Query: 261 GVASEIQKEKKGRDVYILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTT 320
+ + +++++G NVGKS IN ++K++ R S PGTT
Sbjct: 172 LLEEISDYIDEYEEIFVVGVTNVGKSTLINQIIKQISGRGSVITT--------SRFPGTT 223
Query: 321 LGPIQIDAFLGGGKLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNN 380
L I+I ++ DTPG+ + A + ++D L P ++ + +
Sbjct: 224 LDKIEI-PLTEKTRVIDTPGIIHDSQMAHFIDSKDFKYLLPNKEVKAGTLQLSK------ 276
Query: 381 EFKSHGLNGFTIFWGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVT 440
G IF GL ID L + +T Y +++++ + A++ + + G
Sbjct: 277 --------GQAIFLAGLGWIDFLNK-SKISVTAYFENNIELHRGKIENAEKLFSSQAGRL 327
Query: 441 LTPPIGKQKAEGWKGLDRERLLEIKFEDTERPASDVAISGLGWIS 485
L P + K+ ++ L+++ EIK + D AI+GLGW +
Sbjct: 328 LKPTVLKE----YRELEKK---EIKL----KANQDFAIAGLGWFT 361
>gi|374339364|ref|YP_005096100.1| ribosome biogenesis GTPase YqeH [Marinitoga piezophila KA3]
gi|372100898|gb|AEX84802.1| ribosome biogenesis GTPase YqeH [Marinitoga piezophila KA3]
Length = 373
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 112/440 (25%), Positives = 190/440 (43%), Gaps = 81/440 (18%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C+GCG +QT + PG++ +E K + LC RC L H + + + +
Sbjct: 3 CHGCGVEIQTVDPQKPGFLPEHVFE--KFLSNEEEALCQRCFKLKHYGELMPMKIDINFL 60
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
+L + + ++ ++DI+DF G++ +I +L + L++ KVDL
Sbjct: 61 S------------ELKKIIKNFDTVLWVIDIIDFEGTYDKQILELVKDKNVFLIINKVDL 108
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVL--SVHLTSSKSLAGIVGVASEIQKEKKGRDV--- 275
LPK F + DWV+E K LN+ ++ L S+K GI + + K KG+++
Sbjct: 109 LPKSVAFAELKDWVLER-VKNDLNIKKDNIRLISAKKNFGI----NRLMKILKGQNINKA 163
Query: 276 YILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKL 335
++G+ NVGKS+ +N + + S+ PGTTLG ++ G +L
Sbjct: 164 IVVGTTNVGKSSLLNTI--------------TNVKITTSSFPGTTLGVVRRKIPDYGIEL 209
Query: 336 YDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWG 395
YDTPG+ ++R + P+ + ++F G IF
Sbjct: 210 YDTPGIETNNRFTDFFDIYTQVEMIPKRTISRKTFKPDV--------------GKVIFIS 255
Query: 396 GLVRIDLLKVLPET---CLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEG 452
L R +L + + P+++ + ++ ++ Q +G L PP K
Sbjct: 256 SLFRFKILSPAHDDLKPIFLIFAPENISFHQTKEERVEDLLQNRIGEVLYPPYEKNYP-- 313
Query: 453 WKGLDRERLLEI-KFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAV 511
LD E EI E+ E ++A+ GLGWIS VRR G L++ V
Sbjct: 314 ---LDIEYEKEIVMIEENE----ELALPGLGWIS---VRR-------------GPLNIEV 350
Query: 512 HVPKPVEVFVRNPMPVGKAG 531
PK +E+ +R P+ K G
Sbjct: 351 VKPKNIEMVIRKPLISPKKG 370
>gi|269120434|ref|YP_003308611.1| GTP-binding protein HSR1-like protein [Sebaldella termitidis ATCC
33386]
gi|268614312|gb|ACZ08680.1| GTP-binding protein HSR1-related protein [Sebaldella termitidis
ATCC 33386]
Length = 379
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 105/429 (24%), Positives = 189/429 (44%), Gaps = 74/429 (17%)
Query: 98 VASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNG 157
+ C GCG LQT + GYV ++K +LC RC + H
Sbjct: 3 IKKCSGCGITLQTEFPENAGYVS------EEKFITGTDILCQRCYRIKH----------- 45
Query: 158 GYAGGKQF-VSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVT 216
Y + ++ ++ ++++ ++ +I+ + DI+DF GSF I D I+++
Sbjct: 46 -YGKHQDIELTKEDYKKEVEDAVKKSDIILAIFDIIDFEGSFSEEILDFLREYNSIVMIN 104
Query: 217 KVDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVY 276
K+DLLPK + + DWV ++ + + L S+K+ G+ GV +I+ K+
Sbjct: 105 KIDLLPKTIHPSEISDWVKGRLEEEGIVPYDIALMSTKTKYGVNGVLRKIKSFKENATAV 164
Query: 277 ILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLY 336
+LG N GKS+F+N+L+ E+D + S PGTTL I+ K+
Sbjct: 165 VLGVTNTGKSSFMNSLM----EKDKSTI---------SKYPGTTLKSIKNKIDGTDIKII 211
Query: 337 DTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGG 396
DTPG+ R + ++ ++ AL P + ++F NN+ F+ G
Sbjct: 212 DTPGLIPEKRISDLLEPKEALALVPNGEINRKTFK-----PDNNQ---------VFFFDG 257
Query: 397 LVRIDLLKVLPETCLTF--YGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWK 454
L+ ++ E F + K ++ ++ D+ ++ K+ T P +K ++
Sbjct: 258 LMWFRVIVEEDEKSPIFSAFAAKDIKFHVTKKDRVEDLLNKDF---FTFPSKTEKDAYYQ 314
Query: 455 GLDRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVP 514
+ +E L FE ++AISGLGWI+V+ G L + + P
Sbjct: 315 KMKKETLTVEAFE-------EMAISGLGWINVK----------------RGPLKIELSYP 351
Query: 515 KPVEVFVRN 523
+ V++ +RN
Sbjct: 352 ENVKIVIRN 360
>gi|148269224|ref|YP_001243684.1| HSR1-like GTP-binding protein [Thermotoga petrophila RKU-1]
gi|147734768|gb|ABQ46108.1| GTP-binding protein, HSR1-related [Thermotoga petrophila RKU-1]
Length = 363
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 109/427 (25%), Positives = 181/427 (42%), Gaps = 73/427 (17%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +Q + PGY+ + YE ++ + + +LC RC + H + V N +
Sbjct: 3 CPGCGAAIQFEDPKKPGYIPREVYE--RRLEEGREILCQRCFRMKHYGKLEPVEFNWDFK 60
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++L+ L ++V ++DI DF G++ I ++ +I + KVDL
Sbjct: 61 --------NQLKSYLGGF----DVVVWVIDIFDFEGTYREDIAEILKGKRVIYAINKVDL 108
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRD-VYILG 279
LP+ + +WV KK++ V + S G++S ++ D ++G
Sbjct: 109 LPRVVTVKEIKEWV-----KKRIRVHNPDDIRIVSAEKSFGLSSLVKYLSLLTDKALVVG 163
Query: 280 SANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS+ +N + + S PGTTLG ++ LYDTP
Sbjct: 164 VTNVGKSSLMNKIC--------------THENTISPFPGTTLGILRRKVREANLYLYDTP 209
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVR 399
G+ + R ++ +E + P+ L ++F NG TIF GGL R
Sbjct: 210 GIMTNDRILDLLDSECQKRVLPREELSRKTF--------------KPDNGRTIFMGGLCR 255
Query: 400 IDL-LKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDR 458
D+ + + K + + ++ADE + LG L PP K + E +K R
Sbjct: 256 FDIHFETEKNPIFLLFSSKEVTFHETKRERADELMRNRLGDLLIPPCSKTEFENFK-WKR 314
Query: 459 ERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVE 518
E T + ++A++GLGW+S VRR G + V VP V+
Sbjct: 315 EIF-------TLKEGEELAVAGLGWMS---VRR-------------GPFTVEVTVPDNVK 351
Query: 519 VFVRNPM 525
+ VR +
Sbjct: 352 LVVREAL 358
>gi|145347663|ref|XP_001418282.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578511|gb|ABO96575.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 604
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 108/380 (28%), Positives = 182/380 (47%), Gaps = 37/380 (9%)
Query: 120 DPDTYELKKKHHQFKTVLCGRC-RLLSHGHMITAVGGNGGYAGGKQFVSADELREKLSHL 178
D T KK TV+C RC L + G + A F A + + L
Sbjct: 163 DEATKRRAKKKRGPPTVVCARCFALRTSGRVKNAAA----EVLLPSFDFARVVGDSFERL 218
Query: 179 RRE-KALIVKLVDIVDFNGSFLARIRDL------AGANPIILVVTKVDLLPKGTDFNCVG 231
E +A+++ +VD++DF+GSF D+ G ++LV KVDL+P +
Sbjct: 219 TGEGRAVVLLMVDLLDFDGSFPVDAIDVIEPYVEKGVVDVLLVANKVDLMPTQCTRTRLT 278
Query: 232 DWVVEATTKKKLN-VLSVHLTSSKSLAGIVGVASEIQKE-KKGRDVYILGSANVGKSAFI 289
+V + L+ VHL S+K+ G+ +A +++ +G++VY++G+ N GKS+ I
Sbjct: 279 SFVRRRSKDFGLSRCAGVHLVSAKAGMGVAILAQQLEDMLDRGKEVYVVGAQNAGKSSLI 338
Query: 290 NALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFL-GGGKLYDTPGVHLHHRQA 348
N L ++ + PI S +PGTTLG +++ A L +YDTPG+ + +
Sbjct: 339 NRLSQRY-----GGPGEEDGGPIASPLPGTTLGMVKLPALLPNSSDVYDTPGLLQPFQLS 393
Query: 349 AVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRIDLLKVLPE 408
+ ++ +++ + P R+ +++ + G TI GGL RID+L+
Sbjct: 394 SRLNGDEMKVVLPNKRVTPRTYRIEV--------------GGTIHIGGLARIDVLESPQR 439
Query: 409 TC-LTFYGPKSLQVYMVPTDK-ADEFYQKELGVTLTPPIGKQKAEGWKGLDRERLLEIKF 466
T LT + + + T K AD F +K G +TPPIG+ + + G R++ I
Sbjct: 440 TLYLTVWASNKVATHYARTTKGADTFLEKHGGTKMTPPIGEARMRQF-GAWGSRVVNIYG 498
Query: 467 EDTERPASDVAISGLGWISV 486
ED + D++I+GL WI V
Sbjct: 499 EDWQASTRDISIAGLCWIGV 518
>gi|108951285|gb|ABG25036.1| nitric oxide synthase, partial [Nicotiana tabacum]
Length = 99
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 64/76 (84%), Positives = 70/76 (92%)
Query: 100 SCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGY 159
CYGCGAPL TSE DAPGYVD +TY+LKKKHHQ + VLCGRCRLLSHGHMITAVGGNGGY
Sbjct: 24 CCYGCGAPLHTSEVDAPGYVDQETYDLKKKHHQLRKVLCGRCRLLSHGHMITAVGGNGGY 83
Query: 160 AGGKQFVSADELREKL 175
+GGKQFV+A+ELREKL
Sbjct: 84 SGGKQFVTAEELREKL 99
>gi|418026729|ref|ZP_12665523.1| GTP-binding protein [Streptococcus thermophilus CNCM I-1630]
gi|354694903|gb|EHE94534.1| GTP-binding protein [Streptococcus thermophilus CNCM I-1630]
Length = 272
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 87/275 (31%), Positives = 140/275 (50%), Gaps = 34/275 (12%)
Query: 214 VVTKVDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGR 273
V K D+LPK V W+ E ++ + + V LTS+++ I + I+ +KGR
Sbjct: 5 VGNKKDILPKSVKDGKVTQWLTERAHEEGMRPVDVMLTSAQNHHAIKELIQRIEALRKGR 64
Query: 274 DVYILGSANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGG 332
DVY++G NVGKS INA++K++ G++D S PGTTL I+I G
Sbjct: 65 DVYVVGVTNVGKSTLINAIIKEITGDKDVITT---------SRFPGTTLDKIEI-PLDDG 114
Query: 333 GKLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTI 392
++DTPG+ H+ A + A+DL ++P+ ++ +++ + + G T+
Sbjct: 115 SYIFDTPGIIHRHQMAHYLSAKDLKYVSPKKEIKPKTYQLNA--------------GQTL 160
Query: 393 FWGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEG 452
F GGL R D + + F+ +L+++ D AD FY K +G L PP K+ A
Sbjct: 161 FLGGLGRFDFIDGDKQGFTAFFD-NNLKLHRTKLDGADAFYDKHVGSLLMPPGPKELA-- 217
Query: 453 WKGLDRERLLEIKFEDTERPASDVAISGLGWISVE 487
D +L+ +F T + +DV SGLGWI V+
Sbjct: 218 ----DFPKLVRHEF--TIKDKTDVVFSGLGWIRVQ 246
>gi|421193547|ref|ZP_15650793.1| GTP-binding protein YqeH [Oenococcus oeni AWRIB553]
gi|399971706|gb|EJO05945.1| GTP-binding protein YqeH [Oenococcus oeni AWRIB553]
Length = 385
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 100/405 (24%), Positives = 185/405 (45%), Gaps = 55/405 (13%)
Query: 88 KDKVLKVNSAVASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTV------LCGRC 141
+D+V ++ + C GCGA Q+++ PGY++ ++L+ +V LC RC
Sbjct: 5 EDQVTQLLNDGIVCIGCGARFQSTKRGVPGYLNE--HKLRSYLSSLNSVDDPINLLCERC 62
Query: 142 RLLSHGHMITAVGGNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLAR 201
L + + I V +D ++ L+ + +KAL++ LVD+ D GS +
Sbjct: 63 FKLKNYNQIEPVA-----------FDSDHFQKILTSISDKKALVLYLVDLFDVGGSMING 111
Query: 202 IRDLAGANPIILVVTKVDLLPKGTDFNCVGDWVVEATTKKKLNVL-SVHLTSSKSLAGIV 260
+ G NP++LV K D+LPK N + + + + + + VL +V L++ K +G
Sbjct: 112 LTRFIGNNPVVLVGNKFDILPKSVKKNKIANRLTKEAKNEGIKVLKTVVLSADKGDSGQY 171
Query: 261 GVASEIQKEKKGRDVYILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTT 320
+ + +++++G NVGKS IN ++K++ R S PGTT
Sbjct: 172 LLEEISDYIDEYEEIFVVGVTNVGKSTLINQIIKQISGRGSVITT--------SRFPGTT 223
Query: 321 LGPIQIDAFLGGGKLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNN 380
L I+I ++ DTPG+ + A + ++D L P ++ + +
Sbjct: 224 LDKIEI-PLTEKTRVIDTPGIIHDSQMAHFIDSKDFKYLLPNKEVKAGTLQLSK------ 276
Query: 381 EFKSHGLNGFTIFWGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVT 440
G IF GL ID L + +T Y +++++ + A++ + + G
Sbjct: 277 --------GQAIFLAGLGWIDFLNK-SKISVTAYFENNIELHRGKIENAEKLFSSQAGRL 327
Query: 441 LTPPIGKQKAEGWKGLDRERLLEIKFEDTERPASDVAISGLGWIS 485
L P + K+ ++ L+++ EIK + D AI+GLGW +
Sbjct: 328 LKPTVLKE----YRELEKK---EIKL----KANQDFAIAGLGWFT 361
>gi|222100701|ref|YP_002535269.1| GTP-binding protein, HSR1-related [Thermotoga neapolitana DSM 4359]
gi|221573091|gb|ACM23903.1| GTP-binding protein, HSR1-related [Thermotoga neapolitana DSM 4359]
Length = 363
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 106/431 (24%), Positives = 187/431 (43%), Gaps = 81/431 (18%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +Q + PGY+ + +E K+ + K +LC RC + H + + + +
Sbjct: 3 CPGCGANIQFEDPKKPGYIPREAFE--KRLEEGKEILCQRCFRIKHYGKLEPIEYDWDFR 60
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++L+ L +++ ++DI DF G++ I +L ++ V+ K+DL
Sbjct: 61 --------NQLKSYLGGF----EVVLWVIDIFDFEGTYREDIANLLEGKDVVYVINKLDL 108
Query: 221 LPKGTDFNCVGDWV---VEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYI 277
LP+ V +WV ++A +++ ++S + L +V + + + + +
Sbjct: 109 LPRAVTVKEVKEWVKKRIKAKDPERIRIVSAE--KNYGLKSLVKLLARLTDK-----ALV 161
Query: 278 LGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYD 337
+G NVGKS+ +N + + S+ PGTTLG ++ LYD
Sbjct: 162 IGVTNVGKSSLLNRIC--------------THENTISSFPGTTLGILRRKVKGENLYLYD 207
Query: 338 TPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGL 397
TPG+ R ++ E + P+ L ++F + E N TIF GGL
Sbjct: 208 TPGIMTKDRILDLLDPECQKTILPKEELSRKTF----KPERNR----------TIFMGGL 253
Query: 398 VRIDL-LKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEG--WK 454
R D+ + + + + + ++ADE + LG L PP K + E WK
Sbjct: 254 CRFDVDYETERSPIFLLFSSREVTFHETRRERADELMKNRLGDLLKPPCSKARYEDFTWK 313
Query: 455 GLDRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVP 514
+ KF E ++A++GLGW+S VRR G L + V VP
Sbjct: 314 --------KEKFVLNE--GEELAVAGLGWMS---VRR-------------GPLTVEVTVP 347
Query: 515 KPVEVFVRNPM 525
+ V++ VR +
Sbjct: 348 ENVKLVVREAL 358
>gi|401406986|ref|XP_003882942.1| hypothetical protein NCLIV_026980 [Neospora caninum Liverpool]
gi|325117358|emb|CBZ52910.1| hypothetical protein NCLIV_026980 [Neospora caninum Liverpool]
Length = 895
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 115/426 (26%), Positives = 188/426 (44%), Gaps = 74/426 (17%)
Query: 134 KTVLCGRCRLLSHGHMITAVGGNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVD 193
K VLC RC + G I G G++ G + D + ++ LR ++ + + +D++
Sbjct: 434 KLVLCQRCHAMKSGKKIDE-GLRVGFSHGDHLLHPDRFKRLVASLRTKRCIFLLFLDLI- 491
Query: 194 FNGSFLARIRDLAGANPIILVVTKVDLLP--------------KGTDFNCVGD------W 233
+ + + DL NP+ + VTK DLLP +G C+ + +
Sbjct: 492 -SPELVPALPDLVRVNPVYVAVTKCDLLPGSLRRPDAPFNSSAEGFRRRCIANTNVARHY 550
Query: 234 VVEATTK----KKLNVLSVHLTSSKSLAGIVGVASEIQKE--KKGRDVYILGSANVGKSA 287
V E ++ K V ++ + S+KS AG+ + + + +E ++ R VY++G+AN GKS+
Sbjct: 551 VFEMLSRAYRLKDFTVKNIFMISNKSGAGVSHLINAVGQEAIRRKRPVYVIGAANAGKSS 610
Query: 288 FINALLKKMGERDPAAAMAQKYRP----------IQSAVPGTTLGPIQIDAFLGGGKLYD 337
F+N +L K R+P + +P SAVPGTTL I + G K+ D
Sbjct: 611 FLNKILAK-ATREPESTPGPLQKPQLKGAKAAAAASSAVPGTTLDFIPL-VVNGKWKVID 668
Query: 338 TPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGL 397
TPG+ L A ++ E+L A P S L S V G ++ GGL
Sbjct: 669 TPGIFLKGSYANLLTQEELQAAVPSSALHLCSARVA--------------EGHGVWLGGL 714
Query: 398 VRIDLLKVLPETC-LTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGL 456
R++LL C +F+ +SL + E + L+PP ++ + L
Sbjct: 715 ARVELLG--DRGCFFSFFLSRSLLIRPFTAAGTPEGKLEAQRSRLSPPFSPERRKALSPL 772
Query: 457 DRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKP 516
E I + + A+D+ +SGLGWIS+ + G L + VHVP
Sbjct: 773 VPEDFY-IAGKGWQEAAADIVLSGLGWISI---------------TGCGPLRVRVHVPDE 816
Query: 517 VEVFVR 522
V V+ R
Sbjct: 817 VRVYQR 822
>gi|157364447|ref|YP_001471214.1| HSR1-like GTP-binding protein [Thermotoga lettingae TMO]
gi|157315051|gb|ABV34150.1| GTP-binding protein HSR1-related [Thermotoga lettingae TMO]
Length = 367
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 107/387 (27%), Positives = 173/387 (44%), Gaps = 57/387 (14%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +Q PGYV + ++ K+ + K +LC RC + H + +V +A
Sbjct: 3 CRGCGAQIQHENQRKPGYVPLEVFQ--KRRAEGKDILCQRCFRMRHYGKLESVKITNDFA 60
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++LS L R+ +IV ++DI DF GS+ + ++ I+VV K+DL
Sbjct: 61 ------------KRLSKLVRKFEVIVWVLDISDFEGSYDPLLAEILKDLNKIIVVNKIDL 108
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + WV E ++ V+LTS+ A G S ++ +V +G
Sbjct: 109 LPKAVTIREIKSWVEERLKGQRFR--DVYLTSA---AKNYGTRSLLRALSLYENVIFVGM 163
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS ++ +K+ D + PGTTL I+ A + ++DTPG
Sbjct: 164 TNVGKS----SIFQKLTGVDVNV----------TPFPGTTLDLIK--ATVKNTDIFDTPG 207
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ + R D Q ++ +S + ++ FK G TIF GGL R+
Sbjct: 208 IFSNRRII------DFLEPGSQKKISQKSLSRMT-------FKPQ--KGQTIFIGGLCRL 252
Query: 401 DL-LKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRE 459
D + +S++ ++ T KAD + K+ G L PP ++ +D
Sbjct: 253 DFSFDTELPPIFQIFASESVKFHVTSTSKADNLHVKQYGRLLVPPFKPKEL----SMDSL 308
Query: 460 RLLEIKFEDTERPASDVAISGLGWISV 486
E +FE ++AI+GLGW+SV
Sbjct: 309 NWKEEEFELNT--GEELAIAGLGWLSV 333
>gi|160902307|ref|YP_001567888.1| hypothetical protein Pmob_0841 [Petrotoga mobilis SJ95]
gi|160359951|gb|ABX31565.1| conserved hypothetical protein [Petrotoga mobilis SJ95]
Length = 365
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 97/391 (24%), Positives = 180/391 (46%), Gaps = 55/391 (14%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG +QT + + PGY+ + LK+K ++V+C RC L H + + + N ++
Sbjct: 3 CEGCGIGIQTEDQEKPGYIPENV--LKEKIKNNESVVCQRCFKLKHYNYLLPITINSDFS 60
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
G +L + ++ ++ +VD++DF G+F I + I L+V K+DL
Sbjct: 61 G------------ELDKVLKDFETVLWVVDVIDFEGTFRKEIAEKIKGKNIFLIVNKIDL 108
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVH--LTSSKSLAGIVGVAS-EIQKEKKGRDVYI 277
LPK T + + +W++ + +N+ H + S K+ GI +QKEK+ +
Sbjct: 109 LPKSTPYEKLKNWLLLRIKEMGINIRDDHVRMVSVKTGMGIEKTKQLLLQKEKE--KALV 166
Query: 278 LGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYD 337
LG NVGKS+F+N L++ E +A + +++ VP T L +L+D
Sbjct: 167 LGVTNVGKSSFLNRLVE--AEITVSAYSGTTLKVLKANVPNTDL------------QLFD 212
Query: 338 TPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGL 397
TPG+ R + P +++ ++F V E N F S +FW +
Sbjct: 213 TPGIFTQDRLCDFFDIYTQVKMIPSKKIKIKTFTV---NEKNVLFISG------LFWLKV 263
Query: 398 VRIDLLKVLPETCLTFYGPKSLQVYMVPTDKA-DEFYQKELGVTLTPPIGKQKAEGWKGL 456
++ + + P +T + P+ + + ++ D + +E+ L PP
Sbjct: 264 LKNGVNNLPP--IITVFLPEEISAHRAKEERVNDLLHNREV---LFPPYDNNFDFDQIEF 318
Query: 457 DRERLLEIKFEDTERPASDVAISGLGWISVE 487
+RE +K + +D+A+ G GW+S++
Sbjct: 319 EREN---VKID----KGNDIALPGAGWLSIK 342
>gi|338730984|ref|YP_004660376.1| ribosome biogenesis GTPase YqeH [Thermotoga thermarum DSM 5069]
gi|335365335|gb|AEH51280.1| ribosome biogenesis GTPase YqeH [Thermotoga thermarum DSM 5069]
Length = 372
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 96/386 (24%), Positives = 160/386 (41%), Gaps = 52/386 (13%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG LQ + PGY+ + + KK+ + K +LC RC L H + V +
Sbjct: 3 CPGCGVELQHDDEYKPGYIPLEAF--KKRKAEGKEILCQRCFWLKHYRKVKPVRIDQN-- 58
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
+ E L + +E L+V ++DI DF GS+ RI+ L + LVV K+DL
Sbjct: 59 ----------VLESLEKVVKESELVVWIIDISDFEGSYDERIKKLLARKKVALVVNKIDL 108
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
+PK + + W+ + L S++ GI + ++K K V +G
Sbjct: 109 IPKAVKIDEIRSWLKTCVNVDDFE--KIFLLSAEKNYGINSLYRFLEKFNK---VCFVGV 163
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS+ N L K + +++PGTTL I K++DTPG
Sbjct: 164 TNVGKSSIFNKLSGK--------------KATVTSLPGTTLDIISAKLKDSQTKIFDTPG 209
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ R + E + +L +F + + +N G+ F + G R
Sbjct: 210 LITSQRLMDFLPVECQAEIWAVKKLSRMTF----KPDKDNVLFVGGMCVFEFDFEGPFR- 264
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
F+ + ++ ++ K D+ ++K G L PP + K ER
Sbjct: 265 --------PIFQFFASEKVKFHLTNITKKDQIWEKHYGKMLVPPCKSSQPSKEKVKWVER 316
Query: 461 LLEIKFEDTERPASDVAISGLGWISV 486
++ +++I+GLGW+SV
Sbjct: 317 FFDLDI------GQELSIAGLGWLSV 336
>gi|239616645|ref|YP_002939967.1| GTP-binding protein HSR1-related [Kosmotoga olearia TBF 19.5.1]
gi|239505476|gb|ACR78963.1| GTP-binding protein HSR1-related [Kosmotoga olearia TBF 19.5.1]
Length = 368
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 112/388 (28%), Positives = 168/388 (43%), Gaps = 55/388 (14%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG +QT D PGY+ D E ++K + K +LC RC L H
Sbjct: 3 CKGCGVEIQTFNDDVPGYIPADVLERRQK--EGKEILCQRCFHLKHYGKFKKE------- 53
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
K S D L++ L HL + ++ ++DI DF+G++ I +L + + V+ KVDL
Sbjct: 54 -KKGVKSLDSLKKYL-HLAKN---VIYVIDIFDFDGTYREEIVELLKEHNVYYVINKVDL 108
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
+PK + W A + K+ V L S+K G+ G + K KK R ++G
Sbjct: 109 VPKEVAPPEIKKW---ARDRLKVQSTRVKLLSAKVGRGVSGFV-KFLKSKKDRRFLVVGV 164
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS+ +NAL GE A KY PGTTL +Q+ G L DTPG
Sbjct: 165 TNVGKSSVLNAL---TGE---GQLTASKY-------PGTTLELVQLKNEDTGLTLIDTPG 211
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ + R ++ + PQ +L T N K T+F+ V I
Sbjct: 212 IFTNDRVTDLLDPWCQAKIMPQKKL---------TVTTINAKKDR-----TVFFSSFVSI 257
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTD--KADEFYQKELGVTLTPPIGKQKAEGWKGLDR 458
+ F+ S V + T+ KA+E + + G L PP G + +K +
Sbjct: 258 TVKGYKGRRSPIFHILTSENVVVHETNPEKAEERWSEWFGRFLVPPCGNSGFDNYKFENH 317
Query: 459 ERLLEIKFEDTERPASDVAISGLGWISV 486
+ LE ++ I GLGW++V
Sbjct: 318 QLRLE--------AGQEIHICGLGWVNV 337
>gi|297746417|emb|CBI16473.3| unnamed protein product [Vitis vinifera]
Length = 610
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 116/438 (26%), Positives = 192/438 (43%), Gaps = 89/438 (20%)
Query: 101 CYGCGAPLQTSESDAPGYV------DPD----------------TYELKKKHHQFKTVLC 138
C GCG +Q S+ PGY DP+ + LKK K V+C
Sbjct: 129 CPGCGVQMQDSDPVQPGYFIKPSQKDPNYRSRIDRRPVAEEPEISDSLKKG--LLKPVVC 186
Query: 139 GRCRLLSH-GHMITAVGGN------GGYAGGKQFVSADELREKLSHLRREKALIVKLVDI 191
RC L H G + N + G++ VS R ++++ +VD
Sbjct: 187 ARCHSLRHYGKVKDPTVENLLPEFDFDHTVGRRLVSTSGTR----------SVVLMVVDA 236
Query: 192 VDFNGSFLARIRDL----------------AGANP-IILVVTKVDLLPKGTDFNCVGDWV 234
DF+GSF R+ + +G P ++LVVTK+DLLP WV
Sbjct: 237 SDFDGSFPKRVAKMVSTTIDENYTAWKMGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWV 296
Query: 235 VEATTKKKLNVL-SVHLTSSKSLAGIVGVASEI-QKEKKGRDVYILGSANVGKSAFINAL 292
+ + N L SVHL SS G+ + +I Q + +V+ +G+ N GKS IN++
Sbjct: 297 RQRAREGGANKLTSVHLVSSVRDWGLKNLVDDIVQLVGRRGNVWAIGAQNAGKSTLINSI 356
Query: 293 LKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFL-GGGKLYDTPGVHLHHRQAAVV 351
K G + ++ VPGTTLG ++++ L G KL+DTPG+ H+ +
Sbjct: 357 GKHAG--------GKLTHLTEAPVPGTTLGIVRVEGVLTGAAKLFDTPGLLNPHQITTRL 408
Query: 352 HAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRIDLLKVLPETC- 410
E+ + L+ +++ + + G ++ GL R+D+ ++ +T
Sbjct: 409 TGEEQKLVHVSKELKPRTYRIKA--------------GHSVHIAGLARLDVEELSVDTVY 454
Query: 411 LTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRERLLEIKFEDTE 470
+T + L ++M T+ A + G L PPIG+++ + +R+ E + T
Sbjct: 455 ITVWASPYLPLHMGKTENACTMVEDHFGRQLQPPIGERRVKELGKWERK---EFRVSGTS 511
Query: 471 RPAS--DVAISGLGWISV 486
+S DVA++GLGW +V
Sbjct: 512 WDSSSVDVAVAGLGWFAV 529
>gi|242067315|ref|XP_002448934.1| hypothetical protein SORBIDRAFT_05g001920 [Sorghum bicolor]
gi|241934777|gb|EES07922.1| hypothetical protein SORBIDRAFT_05g001920 [Sorghum bicolor]
Length = 666
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 100/322 (31%), Positives = 157/322 (48%), Gaps = 44/322 (13%)
Query: 184 LIVKLVDIVDFNGSFLAR-----IRDLAGANP--------IILVVTKVDLLPKGTDFNCV 230
+IV +VD DF+GSF R L G ++LV TKVDLLP +
Sbjct: 294 VIVMVVDCADFDGSFPKRAAKSLFEALEGRRNSKVSETPRLVLVGTKVDLLPWQQMGVRL 353
Query: 231 GDWV---VEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGR-DVYILGSANVGKS 286
WV +A KL+ +V L S + + S I++ R +V+++G+ N GKS
Sbjct: 354 DRWVRGRAKAFGAPKLD--AVFLISVHRDLAVRNLISYIKESAGPRSNVWVIGAQNAGKS 411
Query: 287 AFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFL-GGGKLYDTPGVHLHH 345
INA KK G + R ++AVPGTTLG +++ L K+YDTPG+ +
Sbjct: 412 TLINAFAKKQG--------VKITRLTEAAVPGTTLGILRVTGVLPAKAKMYDTPGLLHPY 463
Query: 346 RQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRIDLLKV 405
A ++ E+ + + LR +SF V G ++ GGL R+D+LK
Sbjct: 464 IMAMRLNNEERKMVEIRKELRPRSFRVKV--------------GQSVHIGGLTRLDVLKS 509
Query: 406 LPETC-LTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRERLLEI 464
+T +T + ++ +++ T+ ADE +K G+ L PPIG ++ G ER +E+
Sbjct: 510 SAQTIYVTVWASSNVPLHLGKTENADELREKHFGIRLQPPIGPERVNEL-GHWTERHIEV 568
Query: 465 KFEDTERPASDVAISGLGWISV 486
+ + D+A+SGLGW S+
Sbjct: 569 SGASWDVNSMDIAVSGLGWYSL 590
>gi|255578453|ref|XP_002530091.1| conserved hypothetical protein [Ricinus communis]
gi|223530402|gb|EEF32290.1| conserved hypothetical protein [Ricinus communis]
Length = 697
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 98/368 (26%), Positives = 175/368 (47%), Gaps = 61/368 (16%)
Query: 184 LIVKLVDIVDFNGSF-----LARIRDLAGAN----------PIILVVTKVDLLPKGTDFN 228
+++ +VD VDF+GSF ++ + L G ++LV TKVDLLP
Sbjct: 325 VVIMVVDCVDFDGSFPKLAAMSLFKALEGTKNDPKTSKRLPKLVLVATKVDLLPSQISPA 384
Query: 229 CVGDWV---VEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGR-DVYILGSANVG 284
+ WV A KL+ V+L SS+ G+ + S +++ R +V+++G+ N G
Sbjct: 385 RLDKWVRHRARAAGAPKLS--GVYLVSSRKDLGVRNLLSFVKELAGPRGNVWVIGAQNAG 442
Query: 285 KSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGG-GKLYDTPGVHL 343
KS INA KK G A+ + ++ VPGTTLG ++I L K+YDTPG+
Sbjct: 443 KSTLINAFAKKEG--------AKISKLTEAPVPGTTLGILRIGGILSAKAKMYDTPGLLH 494
Query: 344 HHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRIDLL 403
+ + ++ E+ + + L+ +++ G + GGL+R+DL
Sbjct: 495 PYLMSMRLNREEQKMVEIRKELQARTY--------------RAKVGQAVHVGGLLRLDLN 540
Query: 404 KVLPETC-LTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRERLL 462
+ ET +T + S+ +++ + A++F++ GV L PP+G+ +A G ER +
Sbjct: 541 QASVETIYITVWASPSVSLHLGKMENANDFWKNHAGVRLQPPVGEDRASEL-GEWEEREI 599
Query: 463 EIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVEVFVR 522
++ + D+AI+GLGW S+ GE L + + +++ +R
Sbjct: 600 KVTGTSWDVNHIDIAIAGLGWFSL---------------CLKGEATLTLWIYDGIQITLR 644
Query: 523 NPMPVGKA 530
P+ + +A
Sbjct: 645 EPLVLDRA 652
>gi|302768775|ref|XP_002967807.1| hypothetical protein SELMODRAFT_62387 [Selaginella moellendorffii]
gi|302799922|ref|XP_002981719.1| hypothetical protein SELMODRAFT_52473 [Selaginella moellendorffii]
gi|300150551|gb|EFJ17201.1| hypothetical protein SELMODRAFT_52473 [Selaginella moellendorffii]
gi|300164545|gb|EFJ31154.1| hypothetical protein SELMODRAFT_62387 [Selaginella moellendorffii]
Length = 459
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 114/454 (25%), Positives = 198/454 (43%), Gaps = 103/454 (22%)
Query: 101 CYGCGAPLQTSESDAPGY---VDPDTY-----------------------ELKKKHHQFK 134
C GCG +Q ++ PGY P Y E KK+ K
Sbjct: 2 CPGCGVYMQDTDPLQPGYFRFTPPSDYHKNDVKSLEETWEDIIDGAEEADERKKRRDMLK 61
Query: 135 T-----------VLCGRCRLLSHGHMITAVGGNGGYAGGKQFVSADELREKLSHLRREKA 183
+ V+C RC L + V F + ++L ++A
Sbjct: 62 SFKREKPSEERLVVCARCHSLKY---YGRVKEKTAETLLPTFDFDKMVGQRLKTAYGKRA 118
Query: 184 LIVKLVDIVDFNGSFLARIRDL----------------AGANP-IILVVTKVDLLPKGTD 226
+++ +VD DF+GSF ++ L G +P +I+ TKVDLLP
Sbjct: 119 VVLMVVDSSDFDGSFPRQVAKLISEVEAQMAATYRTGFTGNSPRLIVAATKVDLLPPQLS 178
Query: 227 FNCVGDWVVEATTKKKLNV------LSVHLTSSKSLAGIVGVASEIQKEKKGR-DVYILG 279
+ W+ +K++ + +VHL S+ G+ + I K R DV+++G
Sbjct: 179 PMRLEQWI-----RKRVIIGGAPRPTAVHLVSATKNWGVQALTERITKVAGPRGDVWVVG 233
Query: 280 SANVGKSAFINALLK-KMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGG-KLYD 337
+ N GKS+ INAL + +G+ + R ++A PGTT+G ++I L KLYD
Sbjct: 234 AQNAGKSSLINALARFNVGKHES--------RLTEAAHPGTTIGILKITGILPQNIKLYD 285
Query: 338 TPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGL 397
TPG+ H+ ++ ED ++ + L+ ++F + G +I GG
Sbjct: 286 TPGIFHSHQLTMRLNEEDFKSVQMRKELKPRTFRIKV--------------GHSIQVGGY 331
Query: 398 VRIDLLKVLPETC-LTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGL 456
+R+DLL+ T +T + + ++M T++A + ++K +GV L PP + W +
Sbjct: 332 LRLDLLEAPARTIYMTVWASPFISLHMGKTERALDVFKKHIGVELKPP---SSLKSW--I 386
Query: 457 DRERLLEIKF----EDTERPASDVAISGLGWISV 486
++ + + KF +D E D+A++GLGW+ +
Sbjct: 387 EQGQFVSQKFRVHGDDWEASTVDIAVAGLGWVGL 420
>gi|226499582|ref|NP_001147795.1| IMP dehydrogenase/GMP reductase [Zea mays]
gi|195613790|gb|ACG28725.1| IMP dehydrogenase/GMP reductase [Zea mays]
gi|223944539|gb|ACN26353.1| unknown [Zea mays]
gi|413924785|gb|AFW64717.1| IMP dehydrogenase/GMP reductase [Zea mays]
Length = 668
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 99/328 (30%), Positives = 161/328 (49%), Gaps = 56/328 (17%)
Query: 184 LIVKLVDIVDFNGSFLARI------------RDLAGANP-IILVVTKVDLLPKGTDFNCV 230
+IV +VD DF+GSF R A P ++LV TKVDLLP +
Sbjct: 296 VIVMVVDCADFDGSFPKRAAKSLFEALEGRRNSKASETPRLVLVGTKVDLLPWQQMGVRL 355
Query: 231 GDWV---VEATTKKKLN---VLSVHLTSSKSLAGIVGVASEIQKEKKGR-DVYILGSANV 283
WV +A KL+ ++SVH + LA + + + I++ R +V+++G+ N
Sbjct: 356 DKWVRGRAKALGAPKLDGVFLISVH----RDLA-VRNLITYIKESAGPRSNVWVIGAQNA 410
Query: 284 GKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFL-GGGKLYDTPGVH 342
GKS INA KK G + R ++AVPGTTLG +++ L K+YDTPG+
Sbjct: 411 GKSTLINAFAKKQG--------VKITRLTEAAVPGTTLGILRVTGVLPAKAKMYDTPGLL 462
Query: 343 LHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRIDL 402
+ A ++ E+ + + +R +SF V G ++ GGL R+D+
Sbjct: 463 HPYIMAMRLNNEERKMVEIRKEMRPRSFRVKV--------------GQSVHIGGLARLDV 508
Query: 403 LKVLPETC-LTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEG---WKGLDR 458
LK +T +T + ++ +++ T+ +DE K G+ L PPIG ++ + W G
Sbjct: 509 LKSSVQTIYITVWASSNVPLHLGKTENSDELRDKHFGIRLQPPIGPERVDELGHWTG--- 565
Query: 459 ERLLEIKFEDTERPASDVAISGLGWISV 486
R +E+ + + D+A+SGLGW S+
Sbjct: 566 -RSIEVSGASWDVNSMDIAVSGLGWYSL 592
>gi|417905371|ref|ZP_12549182.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21269]
gi|341843647|gb|EGS84869.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21269]
Length = 261
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 92/309 (29%), Positives = 145/309 (46%), Gaps = 50/309 (16%)
Query: 218 VDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYI 277
+DLLPK + V +W+ K L V L S++ GI + S I ++ DVYI
Sbjct: 1 MDLLPKQINKRRVKEWLKRTARKYGLEDDDVVLISAEKGWGIDDLLSSIANIRENEDVYI 60
Query: 278 LGSANVGKSAFINALLK-KMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLY 336
+G+ NVGKS IN L++ +GE+D S PGTTL I I +Y
Sbjct: 61 VGTTNVGKSTLINKLIEASVGEKDVVTT---------SRFPGTTLDMIDI-PLDETSFMY 110
Query: 337 DTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGG 396
DTPG+ H+ +V ++L + P+ ++ + + + NE + T+F+GG
Sbjct: 111 DTPGIIQDHQMTHLVSEKELKIIMPKKEIKQRVYQL-------NEAQ-------TLFFGG 156
Query: 397 LVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGL 456
L RID + + F+ L ++ T+KA++ ++ +LG LTPP Q
Sbjct: 157 LARIDYVSGGKRPLVCFFS-NDLNIHRTKTEKANDLWRNQLGDLLTPPGNPQ------NF 209
Query: 457 DRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKP 516
D + ++ E T + DV ISGLG+I++ P + I V VPK
Sbjct: 210 DFNEVKAVRLE-TGKEKRDVMISGLGFITIGPGAKVI-----------------VRVPKN 251
Query: 517 VEVFVRNPM 525
V+V +RN +
Sbjct: 252 VDVVLRNSI 260
>gi|384251297|gb|EIE24775.1| hypothetical protein COCSUDRAFT_10321, partial [Coccomyxa
subellipsoidea C-169]
Length = 386
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 99/372 (26%), Positives = 171/372 (45%), Gaps = 51/372 (13%)
Query: 136 VLCGRCRLLSHGHMITAVGGNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFN 195
VLC RC LSH + + A QF ++ K+ R +A+++ +VD DF+
Sbjct: 8 VLCARCYSLSHYGQVKSARAE---ADLPQFDLGQKVGRKIGLTRHRRAVVLCVVDAADFD 64
Query: 196 GSF-----LARIRDLAGANPI--------ILVVTKVDLLPKGTDFNCVGDWV-VEATTKK 241
GS A ++ G I +L V K DLLP + W+ + A
Sbjct: 65 GSLPRTALQALFSNIEGYQVILGKGDVRFVLAVNKADLLPAQATAERLEKWIRMRAKQGG 124
Query: 242 KLNVLSVHLTSSKSLAGIVGVASEIQKE-KKGRDVYILGSANVGKSAFINALLKKMGERD 300
SV L S+ G+ + + +E DV+++G+ N GKS+ INA+ + +
Sbjct: 125 MPKPTSVELVSALKGWGVEQLLVRLHREVGTTGDVWVVGAQNAGKSSLINAMKRAVRHGK 184
Query: 301 PAAAMAQKYRPIQSAVPGTTLGPIQIDAFLG-GGKLYDTPGVHLHHRQAAVVHAEDLPAL 359
P + +A+PGTTLG +++ + ++DTPGV + ++ + A+++ L
Sbjct: 185 PRNELTT------AALPGTTLGMLKVPGLMPPRCNMFDTPGVPHDFQLSSRLSADEVKLL 238
Query: 360 APQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRIDLLKVLPETC-LTFYGPKS 418
P+ RL+ ++F + G T+F GG+ RID+L T LT +
Sbjct: 239 LPKRRLKPRTFRAAA--------------GQTVFVGGVARIDVLTSPGATLYLTVWASDD 284
Query: 419 LQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRERLLEIKF----EDTERPAS 474
L + T+ A+E Y+K LG L PP+ ++ G L+ + + + ++
Sbjct: 285 LTCHFGKTEGAEERYEKSLGTMLVPPLEQEHKLG-------PLVPCQVTAQGTNWRQSST 337
Query: 475 DVAISGLGWISV 486
D+A++GLGW +V
Sbjct: 338 DIAVAGLGWFAV 349
>gi|115468206|ref|NP_001057702.1| Os06g0498900 [Oryza sativa Japonica Group]
gi|52076484|dbj|BAD45363.1| putative GTPase [Oryza sativa Japonica Group]
gi|113595742|dbj|BAF19616.1| Os06g0498900 [Oryza sativa Japonica Group]
gi|125555454|gb|EAZ01060.1| hypothetical protein OsI_23088 [Oryza sativa Indica Group]
gi|215686793|dbj|BAG89643.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222635637|gb|EEE65769.1| hypothetical protein OsJ_21450 [Oryza sativa Japonica Group]
Length = 681
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 109/385 (28%), Positives = 177/385 (45%), Gaps = 59/385 (15%)
Query: 127 KKKHHQFKTVLCGRCR-LLSHGHMITAVGGNGGYAGGKQFVSADELREKLSHLRREKA-- 183
K + + V+C RC L ++GH+ N D R S L + A
Sbjct: 250 KAEAEEDAAVVCARCHSLRNYGHVKNDKAEN-------LIPDFDFDRFISSRLMKRSAGT 302
Query: 184 -LIVKLVDIVDFNGSFLAR-------------IRDLAGANPIILVVTKVDLLPKGTDFNC 229
+IV + D DF+GSF R L+ ++LV TKVDLLP
Sbjct: 303 PVIVMVADCADFDGSFPKRAAKSLFKALEGRGTSKLSETPRLVLVGTKVDLLPWQQMGVR 362
Query: 230 VGDWV---VEATTKKKLN---VLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGSANV 283
+ WV +A KL+ ++SVH S+ ++ E+ + +V+++G+ N
Sbjct: 363 LEKWVRGRAKAFGAPKLDAVFLISVH--KDLSVRNLISYVKELAGPRS--NVWVIGAQNA 418
Query: 284 GKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFL-GGGKLYDTPGVH 342
GKS INA KK G + R ++AVPGTTLG ++I L K+YDTPG+
Sbjct: 419 GKSTLINAFAKKQG--------VKITRLTEAAVPGTTLGILRITGVLPAKAKMYDTPGLL 470
Query: 343 LHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRIDL 402
+ + +++E+ + + LR + F V + G ++ GGL R+D+
Sbjct: 471 HPYIMSMRLNSEERKMVEIRKELRPRCFRVKA--------------GQSVHIGGLTRLDV 516
Query: 403 LKVLPETC-LTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRERL 461
LK +T +T + S+ +++ T+ A+E K G+ L PPI ++ G ER
Sbjct: 517 LKASVQTIYITVWASPSVSLHLGKTENAEELRDKHFGIRLQPPIRPERVAEL-GHWTERQ 575
Query: 462 LEIKFEDTERPASDVAISGLGWISV 486
+++ + + D+AISGLGW S+
Sbjct: 576 IDVSGVSWDVNSMDIAISGLGWYSL 600
>gi|146318021|ref|YP_001197733.1| GTPase [Streptococcus suis 05ZYH33]
gi|145688827|gb|ABP89333.1| Predicted GTPase [Streptococcus suis 05ZYH33]
Length = 212
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 113/227 (49%), Gaps = 24/227 (10%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT + G+ E K + + C RC L H + I+ V
Sbjct: 6 CIGCGAQIQTLDKAVAGFTPQSALE---KGLETGQLYCQRCFRLRHYNEISDVN------ 56
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
+S D+ + L + AL+V ++DI DFNGS + + N ++LV K D+
Sbjct: 57 -----ISDDDFLKLLHSVGESDALVVNVIDIFDFNGSVIPGLPRFISGNDVLLVGNKQDI 111
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK V W+ E + + + V LTS+++ I + +I++ +KGRDVY++G
Sbjct: 112 LPKSVKTGKVTQWLTERAHEIGMRPVDVVLTSAQNKQAIKDLIEKIEQHRKGRDVYVVGV 171
Query: 281 ANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQI 326
NVGKS INA+++++ G++D S PGTTL I+I
Sbjct: 172 TNVGKSTLINAIIQEITGDKDVITT---------SRFPGTTLDKIEI 209
>gi|383787213|ref|YP_005471782.1| ribosome biogenesis GTPase YqeH [Fervidobacterium pennivorans DSM
9078]
gi|383110060|gb|AFG35663.1| ribosome biogenesis GTPase YqeH [Fervidobacterium pennivorans DSM
9078]
Length = 370
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 101/427 (23%), Positives = 176/427 (41%), Gaps = 75/427 (17%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +Q PG++ + Y K+ + K ++C RC L H M+ +
Sbjct: 4 CPGCGAEIQFDHPGKPGFIPYEVY--TKRLEEGKEIVCQRCFKLKHYGMLVSEA------ 55
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
DE+ E + ++ IV + D+ DF G++ I +L ++ V K D
Sbjct: 56 ------DEDEIMEFIMKAIKKFKHIVYIFDVFDFEGTYRPEIVELLSGANVLYVANKFDT 109
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + + +W+ K + +TS+K+ GI + E++ K +LG
Sbjct: 110 LPKTVSGSQLKEWLKHRIPAKSSEIF---ITSTKNGFGISKLKKELENLKGS--ALVLGV 164
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS+ + A+ ++A Y PGTT+G I+ LG KL+D+PG
Sbjct: 165 TNVGKSSLLKAITN-------SSATISPY-------PGTTIG--LIEHRLGSLKLFDSPG 208
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ ++ R + E + + + ++F E TIF GGL +I
Sbjct: 209 IVVNDRMIDLFDPECQSKILAKGEVTRKTFKPFPEE--------------TIFVGGLCQI 254
Query: 401 --DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDR 458
+ + P+++ + + Y K G L PP GK E +
Sbjct: 255 KAKMKDSNLRPIFQIFAPENVTFHKTKNQNFLQNYPKHFGKLLFPPCGKMDVEKISFKEE 314
Query: 459 ERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVE 518
+ +++I +++ISGL WI+V+ G + + VP+ V
Sbjct: 315 KVVVDID--------QELSISGLCWINVK----------------RGPVEFTITVPENVR 350
Query: 519 VFVRNPM 525
++VR +
Sbjct: 351 IYVREAL 357
>gi|334186050|ref|NP_191277.4| GTP binding protein [Arabidopsis thaliana]
gi|17064928|gb|AAL32618.1| putative protein [Arabidopsis thaliana]
gi|28059086|gb|AAO29986.1| putative protein [Arabidopsis thaliana]
gi|332646103|gb|AEE79624.1| GTP binding protein [Arabidopsis thaliana]
Length = 660
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 165/326 (50%), Gaps = 46/326 (14%)
Query: 211 IILVVTKVDLLPKGTDFNCVGDWV---VEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQ 267
++LV TKVDLLP + WV +A KL+ V++ S++ G+ + + I+
Sbjct: 329 LVLVATKVDLLPTQISPARLDRWVRHRAKAGGAPKLS--GVYMVSARKDIGVKNLLAYIK 386
Query: 268 KEKKGR-DVYILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQI 326
+ R +V+++G+ N GKS INAL KK G A+ R ++ VPGTTLG ++I
Sbjct: 387 ELAGPRGNVWVIGAQNAGKSTLINALSKKDG--------AKVTRLTEAPVPGTTLGILKI 438
Query: 327 DAFLGG-GKLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSH 385
L K+YDTPG+ + + +++E+ + + ++ +S+ V +
Sbjct: 439 GGILSAKAKMYDTPGLLHPYLMSLRLNSEERKMVEIRKEVQPRSYRVKA----------- 487
Query: 386 GLNGFTIFWGGLVRIDLLKVLPETC-LTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPP 444
G ++ GGLVR+DL+ ET +T + S+ +++ T+ A+E ++ G+ L PP
Sbjct: 488 ---GQSVHIGGLVRLDLVSASVETIYITIWASHSVSLHLGKTENAEEIFKGHSGLRLQPP 544
Query: 445 IGKQKAEGWKGLDRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTS 504
IG+ +A G E+ +++ + + D++++GLGW+S+
Sbjct: 545 IGENRASEL-GTWEEKEIQVSGNSWDVKSIDISVAGLGWLSL---------------GLK 588
Query: 505 GELHLAVHVPKPVEVFVRNPMPVGKA 530
G LA+ + ++V +R P+ + +A
Sbjct: 589 GAATLALWTYQGIDVTLREPLVIDRA 614
>gi|320528085|ref|ZP_08029250.1| ribosome biogenesis GTPase YqeH [Solobacterium moorei F0204]
gi|320131433|gb|EFW23998.1| ribosome biogenesis GTPase YqeH [Solobacterium moorei F0204]
Length = 349
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 112/428 (26%), Positives = 168/428 (39%), Gaps = 86/428 (20%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA LQT++S A GY E C RC L H +T G
Sbjct: 4 CKGCGAVLQTTDSKAIGYSPKADAEY-----------CQRCFRLIHYDDLTISMKTG--- 49
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
+ D + ++++ + ALI+ ++D+ DF + I I+++ TK DL
Sbjct: 50 -----IDPDAVIDRIAKM---DALILWVIDLYDFEAGIINGINRKLADKDIVMIATKRDL 101
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LP + +V + + + L S + G+ + + + GR + ++G
Sbjct: 102 LPASCGEEKIAHFVFGRLKDLGIRIERLILASKEEKMGVEEIKECVDELANGRQIVVMGK 161
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTL--GPIQIDAFLGGGKLYDT 338
AN GKS IN L+ A +Y PGTTL ++ID G DT
Sbjct: 162 ANSGKSTLINNLMS------TRVLTASRY-------PGTTLDFNELEID----GHTYIDT 204
Query: 339 PGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLV 398
PG+ + + V DL + P ++ Q F + E + F GGL
Sbjct: 205 PGIEIGNSMLMEVSEADLKTIMPSKNIKPQVFQLRGEQ--------------SFFVGGLA 250
Query: 399 RIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDR 458
R+DL +C+ +Y L V+ + ADE + +G P +AE K R
Sbjct: 251 RLDLSGCKHASCV-WYLSDRLNVHRTNGNYADEKWNTHVGTLFVPT--AIEAEMKKYTIR 307
Query: 459 ERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELH-LAVHVPKPV 517
+ + P DV I GLGW V SGE+ + VHVPK V
Sbjct: 308 KDM----------PKVDVVIDGLGWACV-----------------SGEVSTITVHVPKSV 340
Query: 518 EVFVRNPM 525
V R M
Sbjct: 341 SVTFRKAM 348
>gi|326495204|dbj|BAJ85698.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 114/418 (27%), Positives = 191/418 (45%), Gaps = 70/418 (16%)
Query: 136 VLCGRCR-LLSHGHMITAVGGNGGYAGGKQFVSADELREKLSHLRREKA---LIVKLVDI 191
V+C RC L ++GH+ N D R S L + A +IV +VD
Sbjct: 255 VVCARCHSLRNYGHVKNDRADN-------LIPDFDFDRFISSRLMKRSAGTPVIVMVVDC 307
Query: 192 VDFNGSFLAR-----IRDLAGANP--------IILVVTKVDLLPKGTDFNCVGDWV---V 235
DF+GSF R R L G ++LV TKVDLLP + WV
Sbjct: 308 ADFDGSFPKRAAKSLFRALEGRGSSKLSETPRLVLVGTKVDLLPWEQMGVRLEKWVRGRA 367
Query: 236 EATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGR-DVYILGSANVGKSAFINALLK 294
+A KL+ +V+L S + + S ++ R +V+++G+ N GKS IN K
Sbjct: 368 KAFGAPKLD--AVYLVSVHKDLSVRNLISYVKDLAGPRSNVWVIGAQNAGKSTLINGFAK 425
Query: 295 KMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFL-GGGKLYDTPGVHLHHRQAAVVHA 353
K G R ++AVPGTTLG +++ L K+YDTPG+ + + ++
Sbjct: 426 KQG--------VNITRLTEAAVPGTTLGILRMTGVLPAKAKMYDTPGLLHPYIMSMRLNT 477
Query: 354 EDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRIDLLKVLPETC-LT 412
E+ + + LR ++F V + G ++ GGL R+D+L+ +T +T
Sbjct: 478 EERKMVEIRKELRPRTFRVKA--------------GQSVHIGGLTRLDVLEASVQTIYVT 523
Query: 413 FYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRERLLEIKFEDTERP 472
+ ++ +++ T+ A+E K +G+ L PP+ ++A G ER +++ +
Sbjct: 524 VWASANISLHLGKTENAEELRDKHVGIRLQPPVVPERAAEL-GQWTERRIDVSGLSWDVS 582
Query: 473 ASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVEVFVRNPMPVGKA 530
++D+A+SGLGW S+ G+ +AVH ++V R+ M + +A
Sbjct: 583 STDIAVSGLGWYSL---------------GLKGKATVAVHTFDGIDVTQRDAMILHRA 625
>gi|357509569|ref|XP_003625073.1| hypothetical protein MTR_7g090640 [Medicago truncatula]
gi|355500088|gb|AES81291.1| hypothetical protein MTR_7g090640 [Medicago truncatula]
Length = 631
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/324 (27%), Positives = 155/324 (47%), Gaps = 42/324 (12%)
Query: 211 IILVVTKVDLLPKGTDFNCVGDWVVEATTKKKLNVLS-VHLTSSKSLAGIVGVASEIQKE 269
++LV TKVDLLP + WV + LS V+L SS+ G+ V S ++
Sbjct: 298 LVLVATKVDLLPSQVSPTRLDRWVRHRASAGGAPKLSAVYLVSSRKDLGVRNVLSFVKDL 357
Query: 270 KKGR-DVYILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDA 328
R +V+++G+ N GKS INA KK G A+ + ++ VPGTTLG ++I
Sbjct: 358 AGPRGNVWVIGAQNAGKSTLINAFAKKEG--------AKVTKLTEAPVPGTTLGILRIAG 409
Query: 329 FLGG-GKLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGL 387
L K++DTPG+ + + ++ E+ + + L+ +S+ + +
Sbjct: 410 ILSAKAKMFDTPGLLHPYLLSMRLNREEQKMVEIRKELKPRSYRIKA------------- 456
Query: 388 NGFTIFWGGLVRIDLLKVLPETC-LTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIG 446
G I GGL R+DL++ +T +T + ++ ++M + A+E + +GV L PPIG
Sbjct: 457 -GQAIHVGGLARLDLIEASVQTMYVTVWASPNVSLHMGKIENANEIWNNHVGVRLQPPIG 515
Query: 447 KQKAEGWKGLDRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGE 506
+A G +ER +++ + DV+I+GLGW S+ GE
Sbjct: 516 NDRAAEL-GTWKEREVKVSGSSWDVNCMDVSIAGLGWFSL---------------GIQGE 559
Query: 507 LHLAVHVPKPVEVFVRNPMPVGKA 530
+ + +E+ +R P+ + +A
Sbjct: 560 ATMKLWTNDGIEITLREPLVLDRA 583
>gi|154249877|ref|YP_001410702.1| HSR1-like GTP-binding protein [Fervidobacterium nodosum Rt17-B1]
gi|154153813|gb|ABS61045.1| GTP-binding protein HSR1-related [Fervidobacterium nodosum Rt17-B1]
Length = 376
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 105/434 (24%), Positives = 180/434 (41%), Gaps = 77/434 (17%)
Query: 93 KVNSAVASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITA 152
K + C GCG+ +Q + PG++ D YE + K K +LC RC L H M+
Sbjct: 3 KAFQTIEKCPGCGSKIQHDKPGKPGFIPADVYERRLKEG--KEILCQRCFKLKHYGMLV- 59
Query: 153 VGGNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPII 212
G + + D LR+ ++ R + ++DI DF G++ I ++ +I
Sbjct: 60 -----GEVDEDEII--DFLRKTVTKFRN----FMYVLDIFDFEGTYRPEINEMIKDKNVI 108
Query: 213 LVVTKVDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKG 272
VV K D+LPK + W+ + N ++ +TS+K+ GI + ++ +
Sbjct: 109 YVVNKFDILPKSVSGAQLKKWLTDRINNA--NSDNIFITSTKNEFGISKLKKYLENLRG- 165
Query: 273 RDVYILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGG 332
++ +LG NVGKS +LLKK+ S PGTT+G ++ L
Sbjct: 166 -EMLVLGVTNVGKS----SLLKKLTNSKVTV----------SPYPGTTIGIVKHK--LKN 208
Query: 333 GKLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTI 392
K+YDTPG+ ++ R + AE + + + ++F E I
Sbjct: 209 LKVYDTPGIIVNDRMIDLFDAECQAKILAKGEVNRKTFKPYPEE--------------VI 254
Query: 393 FWGGLVRIDLLKVLPETCL----TFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQ 448
F GGL +I K+ E L + P+++ + + + K G L PP K
Sbjct: 255 FIGGLCKIS-AKMKNEESLRPIFQIFAPENVSFHKTKNKNFIDNFPKYFGKELVPPCKKM 313
Query: 449 KAEGWKGLDRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELH 508
G + E E +++I GL WI+++ G +
Sbjct: 314 DISGL------NFKNLSIEVNE--GFELSIPGLCWINIK----------------RGPVQ 349
Query: 509 LAVHVPKPVEVFVR 522
V++P+ V V++R
Sbjct: 350 FDVYLPENVSVYIR 363
>gi|421526409|ref|ZP_15973017.1| GTP-binding protein [Fusobacterium nucleatum ChDC F128]
gi|402257487|gb|EJU07961.1| GTP-binding protein [Fusobacterium nucleatum ChDC F128]
Length = 366
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 106/427 (24%), Positives = 184/427 (43%), Gaps = 78/427 (18%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG LQ ++ + G+ P K+ + C RC L H G Y+
Sbjct: 5 CIGCGVELQNTDKNMQGFT-PKPINPKEDMY------CQRCFQLKH---------YGKYS 48
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
K ++ ++ ++++ L + L++ + DI+DF GSF I D+ I++V K+DL
Sbjct: 49 VNK--MTREDYKKEVGKLLDDVKLVIAVFDIIDFEGSFDVEILDILREKDSIVIVNKLDL 106
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQK-EKKGRDVYILG 279
+P + V +WV + ++ + L + + S+K+ G+ GV +I+ G + ++G
Sbjct: 107 IPDEKHPSEVANWVKDRLAEESIAPLDIAIVSTKNGYGVNGVFRKIKHFYPDGVNAMVIG 166
Query: 280 SANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTL-GPIQIDAFLGGGKLYDT 338
NVGKS+ IN LL K A KY PGTT+ + + F G LYDT
Sbjct: 167 VTNVGKSSVINRLLGK------KIATVSKY-------PGTTIKNTLNMIPFTNIG-LYDT 212
Query: 339 PGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLV 398
PG+ R + +V + P S + ++F + I G L+
Sbjct: 213 PGLIPEGRASDLVCDHCAQKIIPASEISRKTFK--------------AKHNRMIMIGNLI 258
Query: 399 RIDLL---KVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKG 455
+ +L ++ P + Y K +Q + +K+ E E+G T P K E K
Sbjct: 259 KFKILNDDEIKP--IFSIYAAKDVQFHETTIEKSKEL---EMGDFFTIPCECCKEEYNKH 313
Query: 456 LDRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPK 515
++ L I ++ GLGW+SV+ G L++ + +P+
Sbjct: 314 KKVDKTLTI------NTGEELVFKGLGWVSVK----------------RGPLNIQITLPE 351
Query: 516 PVEVFVR 522
+E+ +R
Sbjct: 352 EIEISIR 358
>gi|422338012|ref|ZP_16418972.1| ribosome biogenesis GTPase YqeH [Fusobacterium nucleatum subsp.
polymorphum F0401]
gi|355372650|gb|EHG19989.1| ribosome biogenesis GTPase YqeH [Fusobacterium nucleatum subsp.
polymorphum F0401]
Length = 366
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 108/427 (25%), Positives = 181/427 (42%), Gaps = 78/427 (18%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG LQ ++ + GY P K+ + C RC L H G Y+
Sbjct: 5 CVGCGVELQNTDKNLQGYT-PKPINTKEDMY------CQRCFQLKH---------YGKYS 48
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
K ++ ++ ++++ L + L++ + DI+DF GSF I D+ I++V K+DL
Sbjct: 49 VNK--MTREDYKKEVGKLLDDVKLVIAVFDIIDFEGSFDVEILDILREKDSIVIVNKLDL 106
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQK-EKKGRDVYILG 279
+P + V +WV + ++ + L + + S+K+ G+ GV +I+ G + ++G
Sbjct: 107 IPDEKHPSEVANWVKDRLAEESIAPLDIAIVSTKNGYGVNGVFRKIKHFYPDGVNAMVIG 166
Query: 280 SANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTL-GPIQIDAFLGGGKLYDT 338
NVGKS+ IN LL K A KY PGTT+ + + F G LYDT
Sbjct: 167 VTNVGKSSVINRLLGK------KIATVSKY-------PGTTIKNTLNMIPFTNIG-LYDT 212
Query: 339 PGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLV 398
PG+ R + +V + P S + ++F + I G LV
Sbjct: 213 PGLIPEGRASDLVCDNCAQKIIPASEISRKTF--------------KAKHNRMIMIGNLV 258
Query: 399 RIDLL---KVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKG 455
+ +L ++ P + Y K +Q + +KA E E G T P K E K
Sbjct: 259 KFKILNDDEIKP--IFSIYAAKDVQFHETTIEKAKEL---EAGNFFTIPCDCCKEEYNKH 313
Query: 456 LDRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPK 515
+ L I ++ GL W+SV+ G L++ + +P+
Sbjct: 314 KKVNKTLTI------NTGEELVFKGLAWVSVK----------------RGPLNIQITLPE 351
Query: 516 PVEVFVR 522
+E+ +R
Sbjct: 352 EIEISIR 358
>gi|237742004|ref|ZP_04572485.1| GTP-binding protein [Fusobacterium sp. 4_1_13]
gi|229429652|gb|EEO39864.1| GTP-binding protein [Fusobacterium sp. 4_1_13]
Length = 366
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 110/427 (25%), Positives = 183/427 (42%), Gaps = 78/427 (18%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG LQ ++ + GY P K+ + C RC L H G YA
Sbjct: 5 CVGCGVELQNTDKNLQGYT-PKPINTKE------DIYCQRCFQLKH---------YGKYA 48
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
K ++ ++ ++++ L + L++ + DI+DF GSF I D+ I+VV K+DL
Sbjct: 49 VNK--MTREDYKKEVGKLLDDVKLVIAVFDIIDFEGSFDVEILDILREKDSIVVVNKLDL 106
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQK-EKKGRDVYILG 279
+P + V +WV + ++ + L + + S+K+ G+ GV +I+ G + ++G
Sbjct: 107 IPDEKHPSEVANWVKDRLAEESIAPLDIAIVSTKNGYGVNGVFRKIKHFYPDGVNSMVIG 166
Query: 280 SANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTL-GPIQIDAFLGGGKLYDT 338
NVGKS+ IN LL K A KY PGTT+ + + F G LYDT
Sbjct: 167 VTNVGKSSVINRLLGK------KIATVSKY-------PGTTIKNTLNMIPFTNIG-LYDT 212
Query: 339 PGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLV 398
PG+ R + +V + P + ++F + + N I G LV
Sbjct: 213 PGLIPDGRASDLVCDNCAQKIIPSGEISRKTF----KAKYNR----------MIMIGNLV 258
Query: 399 RIDLL---KVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKG 455
+ +L ++ P + Y K +Q + +KA E E G T P K E K
Sbjct: 259 KFKILNNEEIKP--IFSIYAAKDVQFHETTIEKAKEL---EAGNFFTIPCECCKEEYNKH 313
Query: 456 LDRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPK 515
++L I ++ GL W+SV+ G L++ + +P+
Sbjct: 314 KKVNKILTI------NTGEELVFKGLAWVSVK----------------RGPLNIQITLPE 351
Query: 516 PVEVFVR 522
+E+ +R
Sbjct: 352 EIEISIR 358
>gi|418096859|ref|ZP_12733970.1| hypothetical protein SPAR40_1790 [Streptococcus pneumoniae GA16531]
gi|353768580|gb|EHD49104.1| hypothetical protein SPAR40_1790 [Streptococcus pneumoniae GA16531]
Length = 243
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/245 (32%), Positives = 126/245 (51%), Gaps = 34/245 (13%)
Query: 243 LNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGSANVGKSAFINALLKKM-GERDP 301
L + V LTS+++ I V +I+ +KGRDVY++G NVGKS INA+++++ G+++
Sbjct: 9 LRPVDVVLTSAQNKHAIKEVIDKIEHYRKGRDVYVVGVTNVGKSTLINAIIQEITGDQNV 68
Query: 302 AAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPGVHLHHRQAAVVHAEDLPALAP 361
S PGTTL I+I G +YDTPG+ H+ A + A++L ++P
Sbjct: 69 ITT---------SRFPGTTLDKIEI-PLDDGSYIYDTPGIIHRHQMAHYLTAKNLKYVSP 118
Query: 362 QSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRIDLLKVLPETCLTFYGPKSLQV 421
+ ++ +++ + E T+F GGL R D + + F+ L++
Sbjct: 119 KKEIKPKTYQLNPEQ--------------TLFLGGLGRFDFIAGEKQGFTAFFD-NELKL 163
Query: 422 YMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRERLLEIKFEDTERPASDVAISGL 481
+ + A FY K LG LTPP K+K D RL++ F T + +D+ ISGL
Sbjct: 164 HRSKLEGASAFYDKHLGTLLTPPNSKEKE------DFPRLVQHVF--TIKDKTDLVISGL 215
Query: 482 GWISV 486
GWI V
Sbjct: 216 GWIRV 220
>gi|307103636|gb|EFN51894.1| hypothetical protein CHLNCDRAFT_139489 [Chlorella variabilis]
Length = 648
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 106/376 (28%), Positives = 170/376 (45%), Gaps = 51/376 (13%)
Query: 135 TVLCGRCRLLSHGHMITAVGGNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDF 194
+VLC RC L H + + F L+ +L RR L V VD+ DF
Sbjct: 222 SVLCARCFSLRHYGSVKSEAAEAELPA-FDFERRVGLKIQLQKFRRSVVLCV--VDVADF 278
Query: 195 NGSF-----------------LARIRDLAGANPIILVVTKVDLLPKGTDFNCVGDWVVEA 237
+GS L R L +++ V K DLLPK + WV
Sbjct: 279 DGSLPRQALRSILPPDLQQGPLDVGRPLPLGFRLLVAVNKADLLPKQVTPARLEKWVRRR 338
Query: 238 TTKKKLNVLS-VHLTSSKSLAGIVGVASEIQKEKKGR-DVYILGSANVGKSAFINALLKK 295
+ L S VH+ SS G+ + S++Q R DV+++G+ N GKS+ INA+ +
Sbjct: 339 MAQAGLPRPSAVHVVSSTKQRGVRELLSDLQAAVGVRGDVWVVGAQNAGKSSLINAMRQ- 397
Query: 296 MGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFL-GGGKLYDTPGVHLHHRQAAVVHAE 354
A + + + +PGTTLG +++ L G K+ DTPGV H+ + + A+
Sbjct: 398 ------VARLPRDKDVTTAPLPGTTLGMLRVTGLLPTGCKMLDTPGVPHAHQLSGHLTAD 451
Query: 355 DLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRIDLLKVLPETC-LTF 413
++ + P+ +L+ ++F + + G T+ GGL R+D++ T L+
Sbjct: 452 EMRMVLPRRQLKPRTFRIGA--------------GQTVMIGGLARVDVVDSPGATLYLSV 497
Query: 414 YGPKSLQVYMVPTDKADEFYQKELGVTLTPPI-GKQKAEGWKGLDRERLLEIKFEDTERP 472
+ + ++ T+ A+E Y G L PP+ G+Q+ + L R E+ E
Sbjct: 498 FASDEIVCHLGKTETAEERYAMHAGGKLCPPLGGEQRMAAFPPL---RPTEVTAEGDSWK 554
Query: 473 AS--DVAISGLGWISV 486
AS DVAI+GLGW+ V
Sbjct: 555 ASSKDVAIAGLGWVGV 570
>gi|19704407|ref|NP_603969.1| GTP-binding protein [Fusobacterium nucleatum subsp. nucleatum ATCC
25586]
gi|19714665|gb|AAL95268.1| GTP-binding protein [Fusobacterium nucleatum subsp. nucleatum ATCC
25586]
Length = 366
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 109/427 (25%), Positives = 180/427 (42%), Gaps = 78/427 (18%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG LQ ++ + GY P K+ + C RC L H G Y+
Sbjct: 5 CVGCGVELQNTDKNLQGYT-PKPINTKEDMY------CQRCFQLKHY---------GKYS 48
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
K ++ ++ ++++ L + L++ + DI+DF GSF I D+ I++V K+DL
Sbjct: 49 VNK--MTREDYKKEVGKLLDDVKLVIAVFDIIDFEGSFDVEILDILREKDSIVIVNKLDL 106
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQK-EKKGRDVYILG 279
+P + V +WV ++ + L + + S+K+ G+ GV +I+ G + ++G
Sbjct: 107 IPDEKHPSEVANWVKNRLAEESIVPLDIAIVSTKNGYGVNGVFRKIKHFYPDGVNAMVIG 166
Query: 280 SANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTL-GPIQIDAFLGGGKLYDT 338
NVGKS+ IN LL K A KY PGTT+ + + F G LYDT
Sbjct: 167 VTNVGKSSVINRLLGK------KIATVSKY-------PGTTIKNTLNMIPFTNIG-LYDT 212
Query: 339 PGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLV 398
PG+ R + +V + P + ++F + I G LV
Sbjct: 213 PGLIPEGRASDLVCDNCAQKIIPSGEISRKTFK--------------AKHNRMIMIGNLV 258
Query: 399 RIDLL---KVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKG 455
+ +L ++ P + Y K +Q + +K+ E ELG T P K E K
Sbjct: 259 KFKILNNDEIKP--IFSIYAAKDVQFHETTIEKSKEL---ELGNFFTIPCDCCKEEYNKH 313
Query: 456 LDRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPK 515
+ L I ++ GL W+SV+ G L++ V +P+
Sbjct: 314 KKINKTLTI------NTGEELVFKGLAWVSVK----------------RGPLNIQVTLPE 351
Query: 516 PVEVFVR 522
+E+ VR
Sbjct: 352 EIEISVR 358
>gi|297820508|ref|XP_002878137.1| GTP binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297323975|gb|EFH54396.1| GTP binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 642
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 162/326 (49%), Gaps = 48/326 (14%)
Query: 211 IILVVTKVDLLPKGTDFNCVGDWV---VEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQ 267
++LV TKVDLLP + WV +A KL+ V++ S++ G+ + + I+
Sbjct: 313 LVLVATKVDLLPTQISPARLDRWVRHRAKAGGAPKLS--GVYMVSARKDLGVKNLLAYIK 370
Query: 268 KEKKGR-DVYILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQI 326
+ R +V+++G+ N GKS INAL KK G A+ R ++ VPGTTLG ++I
Sbjct: 371 ELAGPRGNVWVIGAQNAGKSTLINALSKKDG--------AKVTRLTEAPVPGTTLGILRI 422
Query: 327 DAFLGG-GKLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSH 385
L K+YDTPG+ + + ++ E+ + + L+ +S+
Sbjct: 423 GGILSAKAKMYDTPGLLHPYLMSLRLNPEERKMVEIRKELQPRSYRA------------- 469
Query: 386 GLNGFTIFWGGLVRIDLLKVLPETC-LTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPP 444
G ++ GGLVR+DL+ ET +T + S+ +++ T+ A+E ++ G+ L PP
Sbjct: 470 ---GQSVHIGGLVRLDLVSASVETIYITIWASHSVSLHLGKTENAEEIFKGHSGLRLQPP 526
Query: 445 IGKQKAEGWKGLDRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTS 504
IG+ +A G E+ +++ + + D++++GLGW+S+
Sbjct: 527 IGENRASEL-GTWEEKEIQVSGNSWDVKSIDISVAGLGWLSL---------------GLK 570
Query: 505 GELHLAVHVPKPVEVFVRNPMPVGKA 530
G LA+ + ++V +R P+ + +A
Sbjct: 571 GAATLALWTYQGIDVTLREPLVIDRA 596
>gi|417699129|ref|ZP_12348300.1| hypothetical protein SPAR69_1686 [Streptococcus pneumoniae GA41317]
gi|421218401|ref|ZP_15675295.1| hypothetical protein AMCSP13_002051 [Streptococcus pneumoniae
2070335]
gi|332199775|gb|EGJ13850.1| hypothetical protein SPAR69_1686 [Streptococcus pneumoniae GA41317]
gi|395583170|gb|EJG43619.1| hypothetical protein AMCSP13_002051 [Streptococcus pneumoniae
2070335]
Length = 243
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/245 (32%), Positives = 126/245 (51%), Gaps = 34/245 (13%)
Query: 243 LNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGSANVGKSAFINALLKKM-GERDP 301
L + V LTS+++ I V +I+ +KGRDVY++G NVGKS INA+++++ G+++
Sbjct: 9 LRPVDVVLTSAQNKHAIKEVIDKIEHYRKGRDVYVVGVTNVGKSTLINAIIQEITGDQNV 68
Query: 302 AAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPGVHLHHRQAAVVHAEDLPALAP 361
S PGTTL I+I G +YDTPG+ H+ A + A++L ++P
Sbjct: 69 ITT---------SRFPGTTLDKIEI-PLDDGSYIYDTPGIIHRHQMAHYLTAKNLKYVSP 118
Query: 362 QSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRIDLLKVLPETCLTFYGPKSLQV 421
+ ++ +++ + E T+F GGL R D + + F+ L++
Sbjct: 119 KKEIKPKTYQLNPEQ--------------TLFLGGLGRFDFIAGEKQGFTAFFD-NELKL 163
Query: 422 YMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRERLLEIKFEDTERPASDVAISGL 481
+ + A FY K LG LTPP K+K D RL++ F T + +D+ ISGL
Sbjct: 164 HRSKLEGASAFYDKHLGTLLTPPNSKEKE------DFPRLVQHVF--TIKDKTDLVISGL 215
Query: 482 GWISV 486
GWI V
Sbjct: 216 GWIRV 220
>gi|296328240|ref|ZP_06870770.1| ribosome biogenesis GTPase YqeH [Fusobacterium nucleatum subsp.
nucleatum ATCC 23726]
gi|296154640|gb|EFG95427.1| ribosome biogenesis GTPase YqeH [Fusobacterium nucleatum subsp.
nucleatum ATCC 23726]
Length = 366
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 109/427 (25%), Positives = 180/427 (42%), Gaps = 78/427 (18%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG LQ ++ + GY P K+ + C RC L H G Y+
Sbjct: 5 CVGCGVELQNTDKNLQGYT-PKPINTKENMY------CQRCFQLKH---------YGKYS 48
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
K ++ ++ ++++ L + L++ + DI+DF GSF I D+ I++V K+DL
Sbjct: 49 VNK--MTREDYKKEVGKLLDDVKLVIAVFDIIDFEGSFDVEILDILREKDSIVIVNKLDL 106
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQK-EKKGRDVYILG 279
+P + V +WV ++ + L + + S+K+ G+ GV +I+ G + ++G
Sbjct: 107 IPDEKHPSEVANWVKNRLAEESIVPLDIAIVSTKNGYGVNGVFRKIKHFYPDGVNAMVIG 166
Query: 280 SANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTL-GPIQIDAFLGGGKLYDT 338
NVGKS+ IN LL K A KY PGTT+ + + F G LYDT
Sbjct: 167 VTNVGKSSVINRLLGK------KIATVSKY-------PGTTIKNTLNMIPFTNIG-LYDT 212
Query: 339 PGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLV 398
PG+ R + +V + P + ++F + I G LV
Sbjct: 213 PGLIPEGRASDLVCDNCAQKIIPSGEISRKTFK--------------AKHNRMIMIGNLV 258
Query: 399 RIDLL---KVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKG 455
+ +L ++ P + Y K +Q + +K+ E ELG T P K E K
Sbjct: 259 KFKILNNDEIKP--IFSIYAAKGVQFHETTIEKSKEL---ELGNFFTIPCDCCKEEYNKH 313
Query: 456 LDRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPK 515
+ L I ++ GL W+SV+ G L++ V +P+
Sbjct: 314 KKINKTLTI------NTGEELVFKGLAWVSVK----------------RGPLNIQVTLPE 351
Query: 516 PVEVFVR 522
+E+ VR
Sbjct: 352 EIEISVR 358
>gi|421245585|ref|ZP_15702083.1| GTP-binding protein [Streptococcus pneumoniae 2081685]
gi|395608112|gb|EJG68208.1| GTP-binding protein [Streptococcus pneumoniae 2081685]
Length = 243
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/245 (32%), Positives = 126/245 (51%), Gaps = 34/245 (13%)
Query: 243 LNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGSANVGKSAFINALLKKM-GERDP 301
L + V LTS+++ I V +I+ +KGRDVY++G NVGKS INA+++++ G+++
Sbjct: 9 LRPVDVVLTSAQNKHAIKEVIDKIEHYRKGRDVYVVGVTNVGKSTLINAIIQEITGDQNV 68
Query: 302 AAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPGVHLHHRQAAVVHAEDLPALAP 361
S PGTTL I+I G +YDTPG+ H+ A + A++L ++P
Sbjct: 69 ITT---------SRFPGTTLDKIEI-PLDDGSYIYDTPGIIHRHQMAHYLTAKNLKYVSP 118
Query: 362 QSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRIDLLKVLPETCLTFYGPKSLQV 421
+ ++ +++ + E T+F GGL R D + + F+ L++
Sbjct: 119 KKEIKPKTYQLNPEQ--------------TLFLGGLGRFDFIAGEKQGFTAFFD-NELKL 163
Query: 422 YMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRERLLEIKFEDTERPASDVAISGL 481
+ + A FY K LG LTPP K+K D RL++ F T + +D+ ISGL
Sbjct: 164 HRSKLEGASAFYDKHLGTLLTPPNSKEKE------DFPRLVQHVF--TIKDKTDLVISGL 215
Query: 482 GWISV 486
GWI V
Sbjct: 216 GWIRV 220
>gi|418108181|ref|ZP_12745218.1| hypothetical protein SPAR70_1728 [Streptococcus pneumoniae GA41410]
gi|418158051|ref|ZP_12794767.1| hypothetical protein SPAR41_1834 [Streptococcus pneumoniae GA16833]
gi|353778458|gb|EHD58926.1| hypothetical protein SPAR70_1728 [Streptococcus pneumoniae GA41410]
gi|353824499|gb|EHE04673.1| hypothetical protein SPAR41_1834 [Streptococcus pneumoniae GA16833]
Length = 243
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 79/245 (32%), Positives = 126/245 (51%), Gaps = 34/245 (13%)
Query: 243 LNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGSANVGKSAFINALLKKM-GERDP 301
L + V LTS+++ I V +I+ +KGRDVY++G NVGKS INA+++++ G+++
Sbjct: 9 LRPVDVVLTSAQNKHAIKEVIDKIEHYRKGRDVYVVGVTNVGKSTLINAIIQEITGDQNV 68
Query: 302 AAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPGVHLHHRQAAVVHAEDLPALAP 361
S PGTTL I+I G +YDTPG+ H+ A + A++L ++P
Sbjct: 69 ITT---------SRFPGTTLDKIEI-PLDDGSYIYDTPGIIHRHQMAHYLTAKNLKYVSP 118
Query: 362 QSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRIDLLKVLPETCLTFYGPKSLQV 421
+ ++ +++ + E T+F GGL R D + + F+ L++
Sbjct: 119 KKEIKPKTYQLNPEQ--------------TLFLGGLGRFDFIAGEKQGFTAFFD-NELKL 163
Query: 422 YMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRERLLEIKFEDTERPASDVAISGL 481
+ + A FY K LG LTPP K+K D RL++ F T + +D+ ISGL
Sbjct: 164 HRSKLEGASAFYDKHLGTLLTPPNSKEKE------DFPRLVQHVF--TIKDKTDLVISGL 215
Query: 482 GWISV 486
GWI V
Sbjct: 216 GWIRV 220
>gi|421213686|ref|ZP_15670640.1| hypothetical protein AMCSP12_001572 [Streptococcus pneumoniae
2070108]
gi|395578917|gb|EJG39427.1| hypothetical protein AMCSP12_001572 [Streptococcus pneumoniae
2070108]
Length = 243
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 79/245 (32%), Positives = 126/245 (51%), Gaps = 34/245 (13%)
Query: 243 LNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGSANVGKSAFINALLKKM-GERDP 301
L + V LTS+++ I V +I+ +KGRDVY++G NVGKS INA+++++ G+++
Sbjct: 9 LRPVDVVLTSAQNKHAIKEVIDKIEYYRKGRDVYVVGVTNVGKSTLINAIIQEITGDQNV 68
Query: 302 AAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPGVHLHHRQAAVVHAEDLPALAP 361
S PGTTL I+I G +YDTPG+ H+ A + A++L ++P
Sbjct: 69 ITT---------SRFPGTTLDKIEI-PLDDGSYIYDTPGIIHRHQMAHYLTAKNLKYVSP 118
Query: 362 QSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRIDLLKVLPETCLTFYGPKSLQV 421
+ ++ +++ + E T+F GGL R D + + F+ L++
Sbjct: 119 KKEIKPKTYQLNPEQ--------------TLFLGGLGRFDFIAGEKQGFTAFFD-NELKL 163
Query: 422 YMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRERLLEIKFEDTERPASDVAISGL 481
+ + A FY K LG LTPP K+K D RL++ F T + +D+ ISGL
Sbjct: 164 HRSKLEGASAFYDKHLGTLLTPPNSKEKE------DFPRLVQHVF--TIKDKTDLVISGL 215
Query: 482 GWISV 486
GWI V
Sbjct: 216 GWIRV 220
>gi|224090037|ref|XP_002308915.1| predicted protein [Populus trichocarpa]
gi|222854891|gb|EEE92438.1| predicted protein [Populus trichocarpa]
Length = 640
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 92/326 (28%), Positives = 160/326 (49%), Gaps = 46/326 (14%)
Query: 211 IILVVTKVDLLPKGTDFNCVGDWV---VEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQ 267
++LV TKVDLLP + WV A KL+ V+L SS G+ + S I+
Sbjct: 310 LVLVGTKVDLLPSQISPTRLDRWVRHRARAAGAPKLS--GVYLVSSCKDVGVRNLLSFIK 367
Query: 268 KEKKGR-DVYILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQI 326
+ R +V+++G+ N GKS INAL KK G A+ + ++ VPGTT+G ++I
Sbjct: 368 ELAGPRGNVWVIGAQNAGKSTLINALAKKGG--------AKVTKLTEAPVPGTTVGILRI 419
Query: 327 DAFLGG-GKLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSH 385
L K+YDTPG+ + + ++ ++ + + L+ +++ V +
Sbjct: 420 GGILSAKAKMYDTPGLLHPYLMSMRLNRDEQKMVEIRKELQPRTYRVKA----------- 468
Query: 386 GLNGFTIFWGGLVRIDLLKVLPETC-LTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPP 444
G TI GGL+R+DL + +T +T + ++ +++ + ADEF++ +GV L PP
Sbjct: 469 ---GQTIHVGGLLRLDLNQASVQTIYVTVWASPNVSLHIGKMENADEFWKNHIGVRLQPP 525
Query: 445 IGKQKAEGWKGLDRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTS 504
G+ +A G ER +++ + + D++I+GLGW SV
Sbjct: 526 TGEDRASEL-GKWEEREIKVSGTSWDANSIDISIAGLGWFSV---------------GLK 569
Query: 505 GELHLAVHVPKPVEVFVRNPMPVGKA 530
GE L + +E+ +R P+ + +A
Sbjct: 570 GEATLTLWTYDGIEITLREPLVLDRA 595
>gi|225435640|ref|XP_002285660.1| PREDICTED: uncharacterized protein yqeH-like [Vitis vinifera]
Length = 584
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 114/454 (25%), Positives = 191/454 (42%), Gaps = 103/454 (22%)
Query: 101 CYGCGAPLQTSESDAPGYV---------------------DPDTYELKKKHHQF------ 133
C GCG +Q S+ PGY +P+ + KK
Sbjct: 85 CPGCGVQMQDSDPVQPGYFIKPSQKDPNYRSRIDRRPVAEEPEISDSLKKGLLVEDENPN 144
Query: 134 -----------KTVLCGRCRLLSH-GHMITAVGGN------GGYAGGKQFVSADELREKL 175
K V+C RC L H G + N + G++ VS R
Sbjct: 145 PNPNPNPNLVEKPVVCARCHSLRHYGKVKDPTVENLLPEFDFDHTVGRRLVSTSGTR--- 201
Query: 176 SHLRREKALIVKLVDIVDFNGSFLARIRDL----------------AGANP-IILVVTKV 218
++++ +VD DF+GSF R+ + +G P ++LVVTK+
Sbjct: 202 -------SVVLMVVDASDFDGSFPKRVAKMVSTTIDENYTAWKMGKSGNVPRVVLVVTKI 254
Query: 219 DLLPKGTDFNCVGDWVVEATTKKKLNVL-SVHLTSSKSLAGIVGVASEI-QKEKKGRDVY 276
DLLP WV + + N L SVHL SS G+ + +I Q + +V+
Sbjct: 255 DLLPSSLSPTRFEHWVRQRAREGGANKLTSVHLVSSVRDWGLKNLVDDIVQLVGRRGNVW 314
Query: 277 ILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFL-GGGKL 335
+G+ N GKS IN++ K G + ++ VPGTTLG ++++ L G KL
Sbjct: 315 AIGAQNAGKSTLINSIGKHAG--------GKLTHLTEAPVPGTTLGIVRVEGVLTGAAKL 366
Query: 336 YDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWG 395
+DTPG+ H+ + E+ + L+ +++ + + G ++
Sbjct: 367 FDTPGLLNPHQITTRLTGEEQKLVHVSKELKPRTYRIKA--------------GHSVHIA 412
Query: 396 GLVRIDLLKVLPETC-LTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWK 454
GL R+D+ ++ +T +T + L ++M T+ A + G L PPIG+++ +
Sbjct: 413 GLARLDVEELSVDTVYITVWASPYLPLHMGKTENACTMVEDHFGRQLQPPIGERRVKELG 472
Query: 455 GLDRERLLEIKFEDTERPAS--DVAISGLGWISV 486
+R+ E + T +S DVA++GLGW +V
Sbjct: 473 KWERK---EFRVSGTSWDSSSVDVAVAGLGWFAV 503
>gi|418160455|ref|ZP_12797154.1| hypothetical protein SPAR43_1796 [Streptococcus pneumoniae GA17227]
gi|353822188|gb|EHE02364.1| hypothetical protein SPAR43_1796 [Streptococcus pneumoniae GA17227]
Length = 243
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 78/253 (30%), Positives = 130/253 (51%), Gaps = 34/253 (13%)
Query: 235 VEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGSANVGKSAFINALLK 294
+E ++ L + V LTS+++ I V +I+ +KGRDVY++G NVGKS INA+++
Sbjct: 1 MERAHEEGLRPVDVVLTSAQNKHAIKEVIDKIEHYRKGRDVYVVGVTNVGKSTLINAIIQ 60
Query: 295 KM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPGVHLHHRQAAVVHA 353
++ G+++ S PGTTL I+I G +YDTPG+ H+ A + A
Sbjct: 61 EITGDQNVITT---------SRFPGTTLDKIEI-PLDDGSYIYDTPGIIHRHQMAHYLTA 110
Query: 354 EDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRIDLLKVLPETCLTF 413
++L ++P+ ++ +++ + E T+F GGL R D + + F
Sbjct: 111 KNLKYVSPKKEIKPKTYQLNPEQ--------------TLFLGGLGRFDFIAGEKQGFTAF 156
Query: 414 YGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRERLLEIKFEDTERPA 473
+ L+++ + A FY K +G LTPP K+K D +L++ F E+
Sbjct: 157 FD-NELKLHRTKLEGASAFYDKHVGTLLTPPNSKEKE------DFPKLVQHVFNIKEK-- 207
Query: 474 SDVAISGLGWISV 486
+D+ ISGLGWI V
Sbjct: 208 TDLVISGLGWIRV 220
>gi|256845344|ref|ZP_05550802.1| ribosome biogenesis GTPase YqeH [Fusobacterium sp. 3_1_36A2]
gi|256718903|gb|EEU32458.1| ribosome biogenesis GTPase YqeH [Fusobacterium sp. 3_1_36A2]
Length = 366
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 107/427 (25%), Positives = 183/427 (42%), Gaps = 78/427 (18%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG LQ ++ + GY K + + + C RC L H G Y+
Sbjct: 5 CVGCGVELQNTDKNLQGYT-------PKPINNKEDMYCQRCFQLKH---------YGKYS 48
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
K ++ ++ ++++ L + L++ + DI+DF GSF I D+ I++V K+DL
Sbjct: 49 VNK--MTREDYKQEVGKLLDDVKLVIAVFDIIDFEGSFDVEILDILREKDSIVIVNKLDL 106
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQK-EKKGRDVYILG 279
+P + V +WV + ++ + L + + S+K+ G+ GV +I+ +G + ++G
Sbjct: 107 IPDEKHPSEVANWVKDRLAEESIAPLDIAIVSTKNGYGVNGVFRKIKHFYPEGVNAMVIG 166
Query: 280 SANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTL-GPIQIDAFLGGGKLYDT 338
NVGKS+ IN LL K A KY PGTT+ + + F G LYDT
Sbjct: 167 VTNVGKSSVINRLLGK------KIATVSKY-------PGTTIKNTLNMIPFTNIG-LYDT 212
Query: 339 PGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLV 398
PG+ R + +V + P + ++F K + + I G LV
Sbjct: 213 PGLIPEGRASDLVCDNCAQKIIPSGEISRKTFKA----------KYNRM----IMIGNLV 258
Query: 399 RIDLL---KVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKG 455
+ +L ++ P + Y K +Q + +KA E E G T P K E K
Sbjct: 259 KFKILNNEEIKP--IFSIYAAKDVQFHETTIEKAKEL---EAGNFFTIPCECCKEEYNKH 313
Query: 456 LDRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPK 515
+ L I ++ GL W+SV+ G L++ + +P+
Sbjct: 314 KKVNKTLTI------NTGEELVFKGLAWVSVK----------------RGPLNIQITLPE 351
Query: 516 PVEVFVR 522
+E+ +R
Sbjct: 352 EIEISIR 358
>gi|449494174|ref|XP_004159469.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein YqeH-like
[Cucumis sativus]
Length = 648
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 93/326 (28%), Positives = 158/326 (48%), Gaps = 46/326 (14%)
Query: 211 IILVVTKVDLLPKGTDFNCVGDWV---VEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQ 267
++LV TKVDLLP + WV +A KL V+L SS+ G+ + S I+
Sbjct: 318 LVLVATKVDLLPSQISPTRLDRWVRHRAKAAGAPKL--AGVYLVSSRKDVGVKNLLSFIK 375
Query: 268 KEKKGR-DVYILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQI 326
+ R +V+++G+ N GKS INAL KK G + + ++ +PGTTLG ++I
Sbjct: 376 ELAGPRGNVWVIGAQNAGKSTLINALAKKKGXK--------VTKLTEAPIPGTTLGILRI 427
Query: 327 DAFLGG-GKLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSH 385
L KL+DTPG+ + + ++ E+ + + L+ +++ V +
Sbjct: 428 GGILSAKAKLFDTPGLLHPYLVSMRLNREEQKMVEIRKELQPRTYRVKARQ--------- 478
Query: 386 GLNGFTIFWGGLVRIDLLKVLPETC-LTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPP 444
T+ GGLVR+DL + ET +T + ++ +++ + ADE ++K G+ L PP
Sbjct: 479 -----TVHVGGLVRLDLNQASVETIYVTVWASPNVSLHLGKIENADEIWKKHAGIRLQPP 533
Query: 445 IGKQKAEGWKGLDRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTS 504
IG +A G ER ++I + D++I+GLGW S+
Sbjct: 534 IGVDRASE-IGKWAEREVKISGTSWVVNSIDISIAGLGWFSL---------------GLK 577
Query: 505 GELHLAVHVPKPVEVFVRNPMPVGKA 530
GE L + + +EV +R P+ + +A
Sbjct: 578 GEATLTLWIDNGIEVTMREPLVLDRA 603
>gi|254303086|ref|ZP_04970444.1| possible GTP-binding protein [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
gi|148323278|gb|EDK88528.1| possible GTP-binding protein [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
Length = 366
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 106/427 (24%), Positives = 182/427 (42%), Gaps = 78/427 (18%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG LQ ++ + GY P K+ + C RC L H G Y+
Sbjct: 5 CVGCGVELQNTDKNLQGYT-PKPINTKEDMY------CQRCFQLKH---------YGKYS 48
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
K ++ ++ ++++ L + L++ + DI+DF GSF I D+ I++V K+DL
Sbjct: 49 VNK--MTREDYKQEVGKLLDDVKLVIAVFDIIDFEGSFDVEILDILREKDSIVIVNKLDL 106
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQK-EKKGRDVYILG 279
+P + V +WV + ++ + L + + S+K+ G+ GV +I+ +G + ++G
Sbjct: 107 IPDEKHPSEVANWVKDRLAEESIAPLDIAIVSTKNGYGVNGVFRKIKHFYPEGVNAMVIG 166
Query: 280 SANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTL-GPIQIDAFLGGGKLYDT 338
NVGKS+ IN LL K A KY PGTT+ + + F G LYDT
Sbjct: 167 VTNVGKSSVINRLLGK------KIATVSKY-------PGTTIKNTLNMIPFTNIG-LYDT 212
Query: 339 PGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLV 398
PG+ R + +V + P S + ++F + I G LV
Sbjct: 213 PGLIPEGRASDLVCDNCAQKIIPASEISRKTF--------------KAKHNRMIMIGNLV 258
Query: 399 RIDLL---KVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKG 455
+ +L ++ P + Y K +Q + +K+ E E G + P K E K
Sbjct: 259 KFKILNDDEIKP--IFSIYAAKDVQFHETTIEKSKEL---EAGDFFSIPCDCCKEEYNKY 313
Query: 456 LDRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPK 515
+ L I ++ GL W+SV+ G L++ + +P+
Sbjct: 314 KKVNKTLTI------NTGEELVFKGLAWVSVK----------------RGPLNIQITLPE 351
Query: 516 PVEVFVR 522
+E+ +R
Sbjct: 352 EIEISIR 358
>gi|294785358|ref|ZP_06750646.1| ribosome biogenesis GTPase YqeH [Fusobacterium sp. 3_1_27]
gi|294487072|gb|EFG34434.1| ribosome biogenesis GTPase YqeH [Fusobacterium sp. 3_1_27]
Length = 366
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 107/427 (25%), Positives = 183/427 (42%), Gaps = 78/427 (18%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG LQ ++ + GY K + + + C RC L H G Y+
Sbjct: 5 CVGCGVELQNTDKNLQGYT-------PKPINNKEDMYCQRCFQLKH---------YGKYS 48
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
K ++ ++ ++++ L + L++ + DI+DF GSF I D+ I++V K+DL
Sbjct: 49 VNK--MTREDYKKEVGKLLDDVKLVIAVFDIIDFEGSFDVEILDILREKDSIVIVNKLDL 106
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQK-EKKGRDVYILG 279
+P + V +WV + ++ + L + + S+K+ G+ GV +I+ +G + ++G
Sbjct: 107 IPDEKHPSEVANWVKDRLAEESIAPLDIAIVSTKNGYGVNGVFRKIKHFYPEGVNAMVIG 166
Query: 280 SANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTL-GPIQIDAFLGGGKLYDT 338
NVGKS+ IN LL K A KY PGTT+ + + F G LYDT
Sbjct: 167 VTNVGKSSVINRLLGK------KIATVSKY-------PGTTIKNTLNMIPFTNIG-LYDT 212
Query: 339 PGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLV 398
PG+ R + +V + P + ++F + + N I G LV
Sbjct: 213 PGLIPEGRASDLVCDNCAQKIIPSGEISRKTF----KAKYNR----------MIMIGNLV 258
Query: 399 RIDLL---KVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKG 455
+ +L ++ P + Y K +Q + +KA E E G T P K E K
Sbjct: 259 KFKILNNDEIKP--IFSIYAAKDVQFHETTIEKAKEL---EAGNFFTIPCDCCKKEYNKH 313
Query: 456 LDRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPK 515
+ L I ++ GL W+SV+ G L++ + +P+
Sbjct: 314 KKVNKTLTI------NTGEELVFKGLAWVSVK----------------RGPLNIQITLPE 351
Query: 516 PVEVFVR 522
+E+ +R
Sbjct: 352 EIEISIR 358
>gi|449446267|ref|XP_004140893.1| PREDICTED: uncharacterized protein YqeH-like [Cucumis sativus]
Length = 648
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 95/326 (29%), Positives = 160/326 (49%), Gaps = 46/326 (14%)
Query: 211 IILVVTKVDLLPKGTDFNCVGDWV---VEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQ 267
++LV TKVDLLP + WV +A KL V+L SS+ G+ + S I+
Sbjct: 318 LVLVATKVDLLPSQISPTRLDRWVRHRAKAAGAPKL--AGVYLVSSRKDVGVKNLLSFIK 375
Query: 268 KEKKGR-DVYILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQI 326
+ R +V+++G+ N GKS INAL KK ER A+ + ++ +PGTTLG ++I
Sbjct: 376 ELAGPRGNVWVIGAQNAGKSTLINALAKK--ER------AKVTKLTEAPIPGTTLGILRI 427
Query: 327 DAFLGG-GKLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSH 385
L KL+DTPG+ + + ++ E+ + + L+ +++ V +
Sbjct: 428 GGILSAKAKLFDTPGLLHPYLVSMRLNREEQKMVEIRKELQPRTYRVKARQ--------- 478
Query: 386 GLNGFTIFWGGLVRIDLLKVLPETC-LTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPP 444
T+ GGLVR+DL + ET +T + ++ +++ + ADE ++K G+ L PP
Sbjct: 479 -----TVHVGGLVRLDLNQASVETIYVTVWASPNVSLHLGKIENADEIWKKHAGIRLQPP 533
Query: 445 IGKQKAEGWKGLDRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTS 504
IG +A G ER ++I + D++I+GLGW S+
Sbjct: 534 IGVDRASE-IGKWAEREVKISGTSWVVNSIDISIAGLGWFSL---------------GLK 577
Query: 505 GELHLAVHVPKPVEVFVRNPMPVGKA 530
GE L + + +EV +R P+ + +A
Sbjct: 578 GEATLTLWIDNGIEVTMREPLVLDRA 603
>gi|237744888|ref|ZP_04575369.1| GTP-binding protein [Fusobacterium sp. 7_1]
gi|336400671|ref|ZP_08581444.1| ribosome biogenesis GTPase YqeH [Fusobacterium sp. 21_1A]
gi|229432117|gb|EEO42329.1| GTP-binding protein [Fusobacterium sp. 7_1]
gi|336161696|gb|EGN64687.1| ribosome biogenesis GTPase YqeH [Fusobacterium sp. 21_1A]
Length = 366
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 108/427 (25%), Positives = 182/427 (42%), Gaps = 78/427 (18%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG LQ ++ + GY P K+ + C RC L H G Y+
Sbjct: 5 CVGCGVELQNTDKNLQGYT-PKPINTKEDMY------CQRCFQLKH---------YGKYS 48
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
K ++ ++ R ++ L + L++ + DI+DF GSF I D+ I+VV K+DL
Sbjct: 49 VNK--MTREDYRNEVGKLLDDVKLVIAVFDIIDFEGSFDVEILDILREKDSIVVVNKLDL 106
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQK-EKKGRDVYILG 279
+P + V +WV + ++ + L + + S+K+ G+ G+ +I+ G + ++G
Sbjct: 107 IPDEKHPSEVANWVKDRLVEESILPLDIAIVSTKNGYGVNGIFRKIKHFYPDGVNAMVIG 166
Query: 280 SANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTL-GPIQIDAFLGGGKLYDT 338
NVGKS+ IN LL K A KY PGTT+ + + F G LYDT
Sbjct: 167 VTNVGKSSVINRLLGK------KIATVSKY-------PGTTIKNTLNMIPFTNIG-LYDT 212
Query: 339 PGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLV 398
PG+ R + +V + P + ++F K + + I G LV
Sbjct: 213 PGLIPEGRASDLVCDNCAQKIIPSGEISRKTFKA----------KYNRM----IMIGNLV 258
Query: 399 RIDLL---KVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKG 455
+ +L ++ P + Y K +Q + +KA E E+G T P K E K
Sbjct: 259 KFKILNNEEIKP--IFSIYAAKDVQFHETTIEKAREL---EVGNFFTIPCECCKEEYNKH 313
Query: 456 LDRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPK 515
+ L I ++ GL W+SV+ G L++ + +P+
Sbjct: 314 KKVNKTLTI------NTGEELVFKGLAWVSVK----------------RGPLNIQITLPE 351
Query: 516 PVEVFVR 522
+++ +R
Sbjct: 352 EIDISIR 358
>gi|357161135|ref|XP_003578990.1| PREDICTED: uncharacterized protein LOC100844826 [Brachypodium
distachyon]
Length = 668
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 104/376 (27%), Positives = 178/376 (47%), Gaps = 59/376 (15%)
Query: 136 VLCGRCR-LLSHGHMITAVGGNGGYAGGKQFVSADELREKLSHLRREKA---LIVKLVDI 191
V+C RC L ++GH+ N D R S L + A +IV +VD
Sbjct: 254 VVCARCHSLRNYGHVKNDKADN-------LIPDFDFDRFISSRLMKRSAGTPVIVMVVDC 306
Query: 192 VDFNGSFLAR-------------IRDLAGANPIILVVTKVDLLPKGTDFNCVGDWV---V 235
DF+GSF R L+ ++LV TKVDLLP + WV
Sbjct: 307 ADFDGSFPKRAAKSLFKALEGRGTSKLSETPRLVLVGTKVDLLPWEQMGVRLEKWVRGRA 366
Query: 236 EATTKKKLN---VLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGSANVGKSAFINAL 292
+A KL+ ++SVH S+ ++ E+ + +V+++G+ N GKS INA
Sbjct: 367 KAFGAPKLDAVFLISVH--KDLSVRNLISYVKELAGPRS--NVWVIGAQNAGKSTLINAF 422
Query: 293 LKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFL-GGGKLYDTPGVHLHHRQAAVV 351
KK G + R ++AVPGTTLG +++ L K+YDTPG+ + + +
Sbjct: 423 AKKQG--------VKITRLTEAAVPGTTLGILRMTGVLPAKAKMYDTPGLLHPYIISMRL 474
Query: 352 HAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRIDLLKVLPETC- 410
++E+ + + LR ++F V + G ++ GGL R+D+L+ +T
Sbjct: 475 NSEERKMVEIRKELRPRTFRVKA--------------GQSVHIGGLTRLDVLEASVQTIY 520
Query: 411 LTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRERLLEIKFEDTE 470
+T + ++ +++ T+ A+E K +G+ L PP+ ++ G ER +++ +
Sbjct: 521 VTVWVSCNISLHLGKTENAEELRSKHIGIRLQPPVCAERVAEL-GQWTERRIDVSGISWD 579
Query: 471 RPASDVAISGLGWISV 486
++D+A+SGLGW S+
Sbjct: 580 VNSTDIAVSGLGWYSL 595
>gi|421145311|ref|ZP_15605194.1| GTP-binding protein [Fusobacterium nucleatum subsp. fusiforme ATCC
51190]
gi|395488292|gb|EJG09164.1| GTP-binding protein [Fusobacterium nucleatum subsp. fusiforme ATCC
51190]
Length = 366
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 107/427 (25%), Positives = 179/427 (41%), Gaps = 78/427 (18%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG LQ ++ + GY P K+ + C RC L H G YA
Sbjct: 5 CVGCGVELQNTDKNLQGYT-PKPINTKEDMY------CQRCFQLKH---------YGKYA 48
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
K ++ ++ ++++ L + L++ + DI+DF GSF I D+ I++V K+DL
Sbjct: 49 VNK--MTREDYKKEVGKLLDDVKLVIAVFDIIDFEGSFDVEILDILREKDSIVIVNKLDL 106
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQK-EKKGRDVYILG 279
+P + V +WV + ++ + L + + S+K+ G+ GV +I+ G + ++G
Sbjct: 107 IPDEKHPSEVANWVKDRLAEESIVPLDIAIVSTKNGYGVNGVFRKIKHFYPDGVNAMVIG 166
Query: 280 SANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTL-GPIQIDAFLGGGKLYDT 338
NVGKS+ IN LL K KY PGTT+ + + F G LYDT
Sbjct: 167 VTNVGKSSVINRLLGK------KIVTVSKY-------PGTTIKNTLNMIPFTNIG-LYDT 212
Query: 339 PGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLV 398
PG+ R + +V + P + ++F + I G LV
Sbjct: 213 PGLIPEGRASDLVCDNCAQKIIPSGEISRKTF--------------KAKHNRMIMIGNLV 258
Query: 399 RIDLL---KVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKG 455
+ +L ++ P + Y K +Q + +KA E E G T P K E K
Sbjct: 259 KFKILNNDEIKP--IFSIYAAKDVQFHETTIEKAKEL---EAGNFFTIPCDCCKEEYNKH 313
Query: 456 LDRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPK 515
+ L I ++ GL W+SV+ G L++ + +P+
Sbjct: 314 KKVNKTLTI------NTGEELVFKGLAWVSVK----------------RGPLNIQITLPE 351
Query: 516 PVEVFVR 522
+E+ +R
Sbjct: 352 EIEISIR 358
>gi|34763137|ref|ZP_00144106.1| GTP-binding protein [Fusobacterium nucleatum subsp. vincentii ATCC
49256]
gi|27887200|gb|EAA24302.1| GTP-binding protein [Fusobacterium nucleatum subsp. vincentii ATCC
49256]
Length = 366
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 108/427 (25%), Positives = 182/427 (42%), Gaps = 78/427 (18%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG LQ ++ + GY P K+ + C RC L H G YA
Sbjct: 5 CVGCGVELQNTDKNLQGYT-PKPINTKEDMY------CQRCFQLKH---------YGKYA 48
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
K ++ ++ ++++ L + L++ + DI+DF GSF I D+ I++V K+DL
Sbjct: 49 VNK--MTREDYKKEVGKLLDDVKLVIAVFDIIDFEGSFDVEILDILREKDSIVIVNKLDL 106
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQK-EKKGRDVYILG 279
+P + V +W+ + ++ + L + + S+K+ G+ GV +I+ G + ++G
Sbjct: 107 IPDEKHPSEVANWIKDRLAEESIVPLDIAIVSTKNGYGVNGVFRKIKHFYPDGVNAMVIG 166
Query: 280 SANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTL-GPIQIDAFLGGGKLYDT 338
NVGKS+ IN LL K A KY PGTT+ + + F G LYDT
Sbjct: 167 VTNVGKSSVINRLLGK------KIATVSKY-------PGTTIKNTLNMIPFTNIG-LYDT 212
Query: 339 PGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLV 398
PG+ R + +V + P + ++F K + + I G LV
Sbjct: 213 PGLIPDGRASDLVCDNCAQKIIPSGEISRKTFKA----------KYNRM----IMIGNLV 258
Query: 399 RIDLL---KVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKG 455
+ +L ++ P + Y K +Q + +KA E E G T P K E K
Sbjct: 259 KFKILNNEEIKP--IFSIYAAKDVQFHETTIEKAKEL---EAGNFFTIPCECCKEEYNKH 313
Query: 456 LDRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPK 515
+ L I ++ GL W+SV+ G L++ + +P+
Sbjct: 314 KKVNKTLTI------NTGEELVFKGLAWVSVK----------------RGPLNIQITLPE 351
Query: 516 PVEVFVR 522
+E+ +R
Sbjct: 352 EIEISIR 358
>gi|422940271|ref|ZP_16967611.1| ribosome biogenesis protein GTPase YqeH [Fusobacterium nucleatum
subsp. animalis ATCC 51191]
gi|339889924|gb|EGQ79133.1| ribosome biogenesis protein GTPase YqeH [Fusobacterium nucleatum
subsp. animalis ATCC 51191]
Length = 366
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 108/427 (25%), Positives = 182/427 (42%), Gaps = 78/427 (18%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG LQ ++ + GY P K+ + C RC L H G Y+
Sbjct: 5 CVGCGVELQNTDKNLQGYT-PKPINTKEDMY------CQRCFQLKH---------YGKYS 48
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
K ++ ++ R ++ L + L++ + DI+DF GSF I D+ I+VV K+DL
Sbjct: 49 VNK--MTREDYRNEVGKLLDDVKLVIAVFDIIDFEGSFDVEILDILREKDSIVVVNKLDL 106
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQK-EKKGRDVYILG 279
+P + V +WV + ++ + L + + S+K+ G+ G+ +I+ G + ++G
Sbjct: 107 IPDEKHPSEVANWVKDRLAEESILPLDIAIVSTKNGYGVNGIFRKIKHFYPDGVNAMVIG 166
Query: 280 SANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTL-GPIQIDAFLGGGKLYDT 338
NVGKS+ IN LL K A KY PGTT+ + + F G LYDT
Sbjct: 167 VTNVGKSSVINRLLGK------KIATVSKY-------PGTTIKNTLNMIPFTNIG-LYDT 212
Query: 339 PGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLV 398
PG+ R + +V + P + ++F K + + I G LV
Sbjct: 213 PGLIPEGRASDLVCDNCAQKIIPSGEISRKTFKA----------KYNRM----IMIGNLV 258
Query: 399 RIDLL---KVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKG 455
+ +L ++ P + Y K +Q + +KA E E+G T P K E K
Sbjct: 259 KFKILNNEEIKP--IFSIYAAKDVQFHETTIEKAREL---EVGNFFTIPCECCKEEYNKH 313
Query: 456 LDRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPK 515
+ L I ++ GL W+SV+ G L++ + +P+
Sbjct: 314 KKVNKTLTI------NTGEELVFKGLAWVSVK----------------RGPLNIQITLPE 351
Query: 516 PVEVFVR 522
+++ +R
Sbjct: 352 EIDISIR 358
>gi|255081316|ref|XP_002507880.1| predicted protein [Micromonas sp. RCC299]
gi|226523156|gb|ACO69138.1| predicted protein [Micromonas sp. RCC299]
Length = 668
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 108/360 (30%), Positives = 171/360 (47%), Gaps = 40/360 (11%)
Query: 134 KTVLCGRCRLLSHGHMITAVGGNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVD 193
+TV+C RC L + V F + ++LS L A+++ LVD+VD
Sbjct: 252 ETVVCARCYSLRN---YGKVKNEAAEILMPSFDFGRVVGDRLSRLGPGGAVVLCLVDLVD 308
Query: 194 FNGSFLARIRDLAG---ANP---IILVVTKVDLLPKGTDFNCVGDWVVEATTKKKLNVLS 247
F+GSF D+ AN ++LV TKVDLLP V +V L S
Sbjct: 309 FDGSFPVDAVDILSPYVANESVDVLLVGTKVDLLPTQCTRARVTSFVRRRAKDLGLRRAS 368
Query: 248 -VHLTSSKSLAGIVGVASEIQKE-KKGRDVYILGSANVGKSAFINALLKKMGERDPAAAM 305
VHL S+ S G+ ++ +++ +GR+V+++G+ N GKS+ IN L KK
Sbjct: 369 GVHLVSAHSGMGVNILSEQLETLLDEGREVWVVGAQNAGKSSLINRLSKKY-----GGPG 423
Query: 306 AQKYRPIQSAVPGTTLGPIQIDAFL-GGGKLYDTPGVHLHHRQAAVVHAEDLPALAPQSR 364
+ P+ S +PGTTLG +++ L G +YDTPG+ + + + AE+ A+ P+ R
Sbjct: 424 PEDGGPLASHLPGTTLGVVKLPGLLPNGSDVYDTPGLLQPFQVSGRLTAEEARAVLPRKR 483
Query: 365 LRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRIDLLKVLPETC-LTFYGPKSLQV-Y 422
L +++ G ++ GGL RID++ T LT + + Y
Sbjct: 484 LAPRTY--------------RAEIGSSVHIGGLARIDVVDGPQRTLYLTVWASHDVPTHY 529
Query: 423 MVPTD--KADEFYQKELGVTLTPPIGKQKAE--GWKGLDRERLLEIKFEDTERPASDVAI 478
MV + KAD FY+K G L+PP+G+ + G G R + + E +R D++I
Sbjct: 530 MVKGEGGKADAFYEKHAGGKLSPPVGENRVAQLGEWGC---RTVTVYGESWQRSDRDISI 586
>gi|150020690|ref|YP_001306044.1| HSR1-like GTP-binding protein [Thermosipho melanesiensis BI429]
gi|149793211|gb|ABR30659.1| GTP-binding protein, HSR1-related [Thermosipho melanesiensis BI429]
Length = 357
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 111/429 (25%), Positives = 181/429 (42%), Gaps = 85/429 (19%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRC-RLLSHGHMITAVGGNGGY 159
C GCG LQT + PGYV P+ L+++ LC RC R++ +G + V
Sbjct: 3 CKGCGVELQTVDPKKPGYV-PEHILLEEEEP-----LCQRCYRIIHYGKLTVPV------ 50
Query: 160 AGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVD 219
++ + D+L + L + ++ +VDI DF G+F I + + VTK D
Sbjct: 51 ---EEEIFLDKLNKVLKDFNK----VIYVVDITDFEGTFRKEIMEKLKNKEVYFAVTKFD 103
Query: 220 LLPKGTDFNCVGDWVVEATTKKKLNVLS--VHLTSSKSLAGIVGVASEIQKEKKGRDVYI 277
LLP +W+ KK+L V S + L SS + G+ + ++ K+ D+ I
Sbjct: 104 LLPSFLSSIEAQEWL-----KKRLGVSSEYIFLLSSVNKFGLRKIEKFLKNLKE--DILI 156
Query: 278 LGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYD 337
LG NVGKS+ I+ P S PGTTLG ++ F G LYD
Sbjct: 157 LGVTNVGKSSLISHF--------------TDANPTISPFPGTTLGIMKRRIF--GINLYD 200
Query: 338 TPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGL 397
TPG+ H R ++ + + RL ++F + S +
Sbjct: 201 TPGILTHDRIIDLLSPDCQAKILNTKRLTRKTFKIDSTR--------------AVLVSAY 246
Query: 398 VRIDL-LKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGL 456
+I++ + + + P+ + + ++ADE + G L PP K+K L
Sbjct: 247 CKIEVEYDMGKKPIFQIFTPEKVTFHETKKERADELMRNRAGDLLVPPCKKEK------L 300
Query: 457 DRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKP 516
D E + D E+ +VAI+GLG+++V+ G L + VPK
Sbjct: 301 DFEFVTHEIEVDEEK---EVAITGLGFLNVK----------------RGPFLLKITVPKG 341
Query: 517 VEVFVRNPM 525
+ + RN +
Sbjct: 342 IRIIKRNRL 350
>gi|449448988|ref|XP_004142247.1| PREDICTED: uncharacterized protein YqeH-like [Cucumis sativus]
Length = 566
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/326 (26%), Positives = 153/326 (46%), Gaps = 44/326 (13%)
Query: 182 KALIVKLVDIVDFNGSFLARIRDLAGAN-----------------PIILVVTKVDLLPKG 224
+++++ +VD DF+GSF ++ +L A+ ++LVVTK DLLP
Sbjct: 191 RSVVLIVVDAADFDGSFPKKVANLVSASIENNSAAWKQGKSGNVPRVVLVVTKTDLLPSS 250
Query: 225 TDFNCVGDWVVEATTKKKLN-VLSVHLTSSKSLAGIVGVASEIQKEKKGR-DVYILGSAN 282
WV + + +N + S+H+ SS GI + ++ + R +V+ +G+ N
Sbjct: 251 LSPEKFEHWVRQRAREGGINKITSLHMVSSIRDWGIKNLVEDVIELAGARGNVWAIGAQN 310
Query: 283 VGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDA-FLGGGKLYDTPGV 341
GKS IN++ K +G + + ++ VPGTTLG I+++ F KL+DTPG+
Sbjct: 311 AGKSTLINSIGKHVG--------GKITQLTEAPVPGTTLGIIRVEGIFPAQAKLFDTPGL 362
Query: 342 HLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRID 401
H+ + E+ + L+ +++ + G TI GL+R+D
Sbjct: 363 LNPHQITTRLTREEQKLVHISKELKPRTYRIKV--------------GHTIHVAGLMRLD 408
Query: 402 LLKVLPETC-LTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
+ + +T +T + L ++M T+ A + + G+ L PPIGK + E R R
Sbjct: 409 VEETNLDTIYVTVWASPYLPLHMGKTENATKMQEDHFGIQLQPPIGKDRVEELGKWVR-R 467
Query: 461 LLEIKFEDTERPASDVAISGLGWISV 486
+ + D A++GLGW ++
Sbjct: 468 EFRVCGTSWDSSCVDAAVAGLGWFAI 493
>gi|449503485|ref|XP_004162026.1| PREDICTED: uncharacterized protein YqeH-like [Cucumis sativus]
Length = 568
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/326 (26%), Positives = 153/326 (46%), Gaps = 44/326 (13%)
Query: 182 KALIVKLVDIVDFNGSFLARIRDLAGAN-----------------PIILVVTKVDLLPKG 224
+++++ +VD DF+GSF ++ +L A+ ++LVVTK DLLP
Sbjct: 191 RSVVLIVVDAADFDGSFPKKVANLVSASIENNSAAWKQGKSGNVPRVVLVVTKTDLLPSS 250
Query: 225 TDFNCVGDWVVEATTKKKLN-VLSVHLTSSKSLAGIVGVASEIQKEKKGR-DVYILGSAN 282
WV + + +N + S+H+ SS GI + ++ + R +V+ +G+ N
Sbjct: 251 LSPEKFEHWVRQRAREGGINKITSLHMVSSIRDWGIKNLVEDVIELAGARGNVWAIGAQN 310
Query: 283 VGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDA-FLGGGKLYDTPGV 341
GKS IN++ K +G + + ++ VPGTTLG I+++ F KL+DTPG+
Sbjct: 311 AGKSTLINSIGKHVG--------GKITQLTEAPVPGTTLGIIRVEGIFPAQAKLFDTPGL 362
Query: 342 HLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRID 401
H+ + E+ + L+ +++ + G TI GL+R+D
Sbjct: 363 LNPHQITTRLTREEQKLVHISKELKPRTYRIKV--------------GHTIHVAGLMRLD 408
Query: 402 LLKVLPETC-LTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
+ + +T +T + L ++M T+ A + + G+ L PPIGK + E R R
Sbjct: 409 VEETNLDTIYVTVWASPYLPLHMGKTENATKMQEDHFGIQLQPPIGKDRVEELGKWVR-R 467
Query: 461 LLEIKFEDTERPASDVAISGLGWISV 486
+ + D A++GLGW ++
Sbjct: 468 EFRVCGTSWDSSCVDAAVAGLGWFAI 493
>gi|260494669|ref|ZP_05814799.1| ribosome biogenesis GTPase YqeH [Fusobacterium sp. 3_1_33]
gi|289764610|ref|ZP_06523988.1| GTP-binding protein [Fusobacterium sp. D11]
gi|423136368|ref|ZP_17124011.1| ribosome biogenesis GTPase YqeH [Fusobacterium nucleatum subsp.
animalis F0419]
gi|260197831|gb|EEW95348.1| ribosome biogenesis GTPase YqeH [Fusobacterium sp. 3_1_33]
gi|289716165|gb|EFD80177.1| GTP-binding protein [Fusobacterium sp. D11]
gi|371961522|gb|EHO79146.1| ribosome biogenesis GTPase YqeH [Fusobacterium nucleatum subsp.
animalis F0419]
Length = 366
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 108/427 (25%), Positives = 181/427 (42%), Gaps = 78/427 (18%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG LQ ++ + GY P K+ + C RC L H G Y+
Sbjct: 5 CVGCGVELQNTDKNLQGYT-PKPINTKEDMY------CQRCFQLKH---------YGKYS 48
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
K ++ ++ R ++ L + L++ + DI+DF GSF I D+ I+VV K+DL
Sbjct: 49 VNK--MTREDYRNEVGKLLDDVKLVIAVFDIIDFEGSFDVEILDILREKDSIVVVNKLDL 106
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQK-EKKGRDVYILG 279
+P + V +WV + ++ + L + + S+K+ G+ G+ +I+ G + ++G
Sbjct: 107 IPDEKHPSEVANWVKDRLVEESILPLDIAIVSTKNGYGVNGIFRKIKHFYPDGVNAMVIG 166
Query: 280 SANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTL-GPIQIDAFLGGGKLYDT 338
NVGKS+ IN LL K A KY PGTT+ + + F G LYDT
Sbjct: 167 VTNVGKSSVINRLLGK------KIATVSKY-------PGTTIKNTLNMIPFTNIG-LYDT 212
Query: 339 PGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLV 398
PG+ R + +V + P + ++F K + + I G LV
Sbjct: 213 PGLIPEGRASDLVCDNCAQKIIPSGEISRKTFKA----------KYNRM----IMIGNLV 258
Query: 399 RIDLL---KVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKG 455
+ +L ++ P + Y K +Q + +KA E E G T P K E K
Sbjct: 259 KFKILNNEEIKP--IFSIYAAKDVQFHETTIEKAREL---EAGNFFTIPCECCKEEYNKH 313
Query: 456 LDRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPK 515
+ L I ++ GL W+SV+ G L++ + +P+
Sbjct: 314 KKVNKTLTI------NTGEELVFKGLAWVSVK----------------RGPLNIQITLPE 351
Query: 516 PVEVFVR 522
+++ +R
Sbjct: 352 EIDISIR 358
>gi|336417944|ref|ZP_08598224.1| ribosome biogenesis GTPase YqeH [Fusobacterium sp. 11_3_2]
gi|336160876|gb|EGN63904.1| ribosome biogenesis GTPase YqeH [Fusobacterium sp. 11_3_2]
Length = 366
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 108/427 (25%), Positives = 181/427 (42%), Gaps = 78/427 (18%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG LQ ++ + GY P K+ + C RC L H G Y+
Sbjct: 5 CVGCGVELQNTDKNLQGYT-PKPINTKEDMY------CQRCFQLKH---------YGKYS 48
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
K ++ ++ R ++ L + L++ + DI+DF GSF I D+ I+VV K+DL
Sbjct: 49 VNK--MTREDYRNEVGKLLDDVKLVIAVFDIIDFEGSFDVEILDILREKDSIVVVNKLDL 106
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQK-EKKGRDVYILG 279
+P + V +WV + ++ + L + + S+K+ G+ G+ +I+ G + ++G
Sbjct: 107 IPDEKHPSEVANWVKDRLAEESILPLDIAIVSTKNGYGVNGIFRKIKHFYPDGVNAMVIG 166
Query: 280 SANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTL-GPIQIDAFLGGGKLYDT 338
NVGKS+ IN LL K A KY PGTT+ + + F G LYDT
Sbjct: 167 VTNVGKSSVINRLLGK------KIATVSKY-------PGTTIKNTLNMIPFTNIG-LYDT 212
Query: 339 PGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLV 398
PG+ R + +V + P + ++F K + + I G LV
Sbjct: 213 PGLIPEGRASDLVCDNCAQKIIPSGEISRKTFKA----------KYNRM----IMIGNLV 258
Query: 399 RIDLL---KVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKG 455
+ +L ++ P + Y K +Q + +KA E E G T P K E K
Sbjct: 259 KFKILNNEEIKP--IFSIYAAKDVQFHETTIEKAREL---EAGNFFTIPCECCKEEYNKH 313
Query: 456 LDRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPK 515
+ L I ++ GL W+SV+ G L++ + +P+
Sbjct: 314 KKVNKTLTI------NTGEELVFKGLAWVSVK----------------RGPLNIQITLPE 351
Query: 516 PVEVFVR 522
+++ +R
Sbjct: 352 EIDISIR 358
>gi|293400788|ref|ZP_06644933.1| ribosome biogenesis GTPase YqeH [Erysipelotrichaceae bacterium
5_2_54FAA]
gi|291305814|gb|EFE47058.1| ribosome biogenesis GTPase YqeH [Erysipelotrichaceae bacterium
5_2_54FAA]
Length = 360
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 101/403 (25%), Positives = 170/403 (42%), Gaps = 73/403 (18%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG +Q+ + GY + C RC + H +
Sbjct: 6 CKGCGVVMQSEDKTKLGYTPKPEADY-----------CQRCFRIRHYDDVVI-------- 46
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
KQ +++DE+ +++ + AL+V +VD+ DF + ++ + I++V TK DL
Sbjct: 47 SMKQGINSDEVLARIAMM---DALVVWVVDLFDFEANMVSGLNRHLLHKDILMVATKRDL 103
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSS-------KSLAGIVGVASEIQKEKKGR 273
LP +GD++++ + + V + + I +A I+ + R
Sbjct: 104 LPATMSDQKLGDFLLQRLKELSIQVKGIVICGDLMKHPRRDENNSIDEIAYAIEHYRNER 163
Query: 274 DVYILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGG 333
DV ++G AN GKS +NAL +K S PGTTL +I+ + G
Sbjct: 164 DVVVMGMANAGKSTMLNAL-------------CEKGDLTTSRHPGTTLDFNEIN--MDGY 208
Query: 334 KLYDTPGVHLHHRQAAVVHAED--LPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFT 391
LYDTPG L + + H +D L + P L+ + + + + T
Sbjct: 209 TLYDTPG--LTRMDSLLTHVDDKLLKTMIPLKPLKPRGYQLYQDQ--------------T 252
Query: 392 IFWGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAE 451
I G VR+DLL +C+ ++ P L ++ +KAD+ +Q+ LG L P I + E
Sbjct: 253 ISLAGFVRLDLLGGHKVSCVAYFAP-DLPLHRSKQEKADQLWQQHLGELLAPAIDESIKE 311
Query: 452 GWKGLDRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIR 494
++ E+ + DV I GLGW V ++IR
Sbjct: 312 -------MQMFEMH---PKGEKVDVVIHGLGWFCVSGDVKTIR 344
>gi|6735297|emb|CAB68124.1| putative protein [Arabidopsis thaliana]
Length = 629
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 159/326 (48%), Gaps = 61/326 (18%)
Query: 211 IILVVTKVDLLPKGTDFNCVGDWV---VEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQ 267
++LV TKVDLLP + WV +A KL+ V++ S++ G+ + + I+
Sbjct: 313 LVLVATKVDLLPTQISPARLDRWVRHRAKAGGAPKLS--GVYMVSARKDIGVKNLLAYIK 370
Query: 268 KEKKGR-DVYILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQI 326
+ R +V+++G+ N GKS INAL KK G A+ R ++ VPGTTLG ++I
Sbjct: 371 ELAGPRGNVWVIGAQNAGKSTLINALSKKDG--------AKVTRLTEAPVPGTTLGILKI 422
Query: 327 DAFLGG-GKLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSH 385
L K+YDTPG+ + + +++E + ++ GQS +
Sbjct: 423 GGILSAKAKMYDTPGLLHPYLMSLRLNSE-------ERKMAGQSVHI------------- 462
Query: 386 GLNGFTIFWGGLVRIDLLKVLPETC-LTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPP 444
GGLVR+DL+ ET +T + S+ +++ T+ A+E ++ G+ L PP
Sbjct: 463 ---------GGLVRLDLVSASVETIYITIWASHSVSLHLGKTENAEEIFKGHSGLRLQPP 513
Query: 445 IGKQKAEGWKGLDRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTS 504
IG+ +A G E+ +++ + + D++++GLGW+S+
Sbjct: 514 IGENRASEL-GTWEEKEIQVSGNSWDVKSIDISVAGLGWLSL---------------GLK 557
Query: 505 GELHLAVHVPKPVEVFVRNPMPVGKA 530
G LA+ + ++V +R P+ + +A
Sbjct: 558 GAATLALWTYQGIDVTLREPLVIDRA 583
>gi|373451898|ref|ZP_09543816.1| ribosome biogenesis GTPase YqeH [Eubacterium sp. 3_1_31]
gi|371967330|gb|EHO84801.1| ribosome biogenesis GTPase YqeH [Eubacterium sp. 3_1_31]
Length = 359
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 101/403 (25%), Positives = 170/403 (42%), Gaps = 73/403 (18%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG +Q+ + GY + C RC + H +
Sbjct: 5 CKGCGVVMQSEDKTKLGYTPKPEADY-----------CQRCFRIRHYDDVVI-------- 45
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
KQ +++DE+ +++ + AL+V +VD+ DF + ++ + I++V TK DL
Sbjct: 46 SMKQGINSDEVLARIAMM---DALVVWVVDLFDFEANMVSGLNRHLLHKDILMVATKRDL 102
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSS-------KSLAGIVGVASEIQKEKKGR 273
LP +GD++++ + + V + + I +A I+ + R
Sbjct: 103 LPATMSDQKLGDFLLQRLKELSIQVKGIVICGDLMKHPRRDENNSIDEIAYAIEHYRNER 162
Query: 274 DVYILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGG 333
DV ++G AN GKS +NAL +K S PGTTL +I+ + G
Sbjct: 163 DVVVMGMANAGKSTMLNAL-------------CEKGDLTTSRHPGTTLDFNEIN--MDGY 207
Query: 334 KLYDTPGVHLHHRQAAVVHAED--LPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFT 391
LYDTPG L + + H +D L + P L+ + + + + T
Sbjct: 208 TLYDTPG--LTRMDSLLTHVDDKLLKTMIPLKPLKPRGYQLYQDQ--------------T 251
Query: 392 IFWGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAE 451
I G VR+DLL +C+ ++ P L ++ +KAD+ +Q+ LG L P I + E
Sbjct: 252 ISLAGFVRLDLLGGHKVSCVAYFAP-DLPLHRSKQEKADQLWQQHLGELLAPAIDESIKE 310
Query: 452 GWKGLDRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIR 494
++ E+ + DV I GLGW V ++IR
Sbjct: 311 -------MQMFEMH---PKGEKVDVVIHGLGWFCVSGDVKTIR 343
>gi|429327798|gb|AFZ79558.1| hypothetical protein BEWA_024070 [Babesia equi]
Length = 642
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 116/443 (26%), Positives = 186/443 (41%), Gaps = 91/443 (20%)
Query: 94 VNSAVASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMIT-- 151
V++ C GCG LQT D GYVD + K VLC RC ++ G + T
Sbjct: 201 VDTKNNQCKGCGVFLQTQHEDKKGYVDHIILQRK------VPVLCKRCSSMNSGGIYTVG 254
Query: 152 --AVGGNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFN-----GSFLARIRD 204
A+G + A G+ + LR LS+ + IV ++D++D + + + R
Sbjct: 255 GVALGQSAKEASGE---TVARLRNALSYHEKRSIKIVYIMDVLDMYFEEGLANLIIKRRA 311
Query: 205 LAG--ANPIILVVTKVDLLPKGTD---FNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGI 259
LA + + +V+ KVDLLPK V ++ + ++ + L S+K A I
Sbjct: 312 LAKKVSTRLYIVLNKVDLLPKHRRKRIMEYVQRFINNKAPQLRVKTRDIFLLSAKKGAAI 371
Query: 260 VGVASEIQKEKKGRDVYILGSANVGKSAFIN-----------------ALLKKMGERDPA 302
S + K + ++ +G+ NVGKS +N +L+ GE
Sbjct: 372 NLFLSVLLKNARRTRIFFVGATNVGKSTLLNCIANFTGGETKKIHNIASLMTVSGEGTNE 431
Query: 303 AAMAQKYRPIQ--------SAVPGTTLGPIQIDAFLGGG-KLYDTPGVHLHHRQAAVVHA 353
K + +Q S VPGTTL + I+ G G KL+DTPG+ L + + A
Sbjct: 432 TDSRGKKKKLQEPPNILSTSIVPGTTLSVMHINT--GTGLKLFDTPGIVLPGSLTSYLTA 489
Query: 354 EDLPALAPQS-------RLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRIDLLKVL 406
+L + P S RLRG G+TI G VRID+++
Sbjct: 490 SELKLVVPSSLGPLKPHRLRG---------------------GYTILLGPFVRIDIVRGR 528
Query: 407 PETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKA-EGWKGLDRERL---L 462
P + K ++V T K ++F T P G + G + L+ R+ +
Sbjct: 529 P-FFFNIFASKRIKVVTKKTFKVEKFLH-------TNPFGDVRLFYGVEPLENSRMARRM 580
Query: 463 EIKFEDTERPASDVAISGLGWIS 485
+I +R +D+ I GLG+++
Sbjct: 581 KILGAGWDRATTDICIQGLGFVT 603
>gi|262037918|ref|ZP_06011343.1| ribosome biogenesis GTPase YqeH [Leptotrichia goodfellowii F0264]
gi|261748061|gb|EEY35475.1| ribosome biogenesis GTPase YqeH [Leptotrichia goodfellowii F0264]
Length = 376
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 111/435 (25%), Positives = 187/435 (42%), Gaps = 73/435 (16%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG LQ + + GYV + + ++ +LC RC + I G N G
Sbjct: 6 CTGCGIELQFEDKNREGYVPEEKFITEE------DLLCQRC------YKIKNYGQNIGNN 53
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
K+ S + +++ ++ +I+ + DI+DF GSF I D I+++ K+DL
Sbjct: 54 LKKEDYSKE-----VANSAKKSDIILPIFDIIDFEGSFTEEILDYLRDYRSIILINKIDL 108
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQK---EKKGRDVYI 277
LP + +WV E ++ + + S+KS G+ G+ +I +KK R V I
Sbjct: 109 LPDFVHPTEIANWVKERLMEEDIIPDDIGFLSAKSKYGVNGIIRKINNLFPDKKVRAV-I 167
Query: 278 LGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYD 337
LG++NVGKS+ IN LL K + + + I + +P T + I D
Sbjct: 168 LGASNVGKSSVINLLLGK-NKITTSKYSGTTLKSINNKIPKTDIMII------------D 214
Query: 338 TPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGL 397
TPG+ R + ++ E L P + ++F + E N F F I
Sbjct: 215 TPGLIPEGRISDLISVESGLKLVPSGEISRKTF----KPEENRVFMFDAFCRFKILETE- 269
Query: 398 VRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLD 457
D K P + Y K+++ ++ D+ +E + + E K +
Sbjct: 270 -NSDRGKYKP--IFSVYSSKNVKFHLTKEDRVEELLKGDF------------FELMKKEE 314
Query: 458 RERLLEIKF--EDTE-RPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVP 514
+E LE KF +TE + D+ I+GLGWI+V+ G L++ + VP
Sbjct: 315 KENYLENKFVTYNTEIQENEDLVIAGLGWINVK----------------RGPLNIELTVP 358
Query: 515 KPVEVFVRNPMPVGK 529
+ +V VR + G+
Sbjct: 359 EYAKVIVRPSLFRGR 373
>gi|340757056|ref|ZP_08693660.1| ribosome biogenesis GTPase YqeH [Fusobacterium varium ATCC 27725]
gi|251834325|gb|EES62888.1| ribosome biogenesis GTPase YqeH [Fusobacterium varium ATCC 27725]
Length = 370
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 103/425 (24%), Positives = 178/425 (41%), Gaps = 68/425 (16%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRC-RLLSHGHMITAVGGNGGY 159
C GCG LQ+ +++ GY+ + +H+ C RC ++ ++G +
Sbjct: 5 CIGCGIELQSEDTNKNGYLPEGKLQENGEHY------CQRCFKIKNYGKYMPVR------ 52
Query: 160 AGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVD 219
++ D+ R+++ + L + + DI+DF GSF I D+ I+V+ K+D
Sbjct: 53 ------LNKDDYRKEVQEAMQYSKLAIAVFDIIDFEGSFDDEILDVLREMDSIVVINKLD 106
Query: 220 LLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQK-EKKGRDVYIL 278
L+P + V DWV + ++ + L + + SSK+ GI G+ +I+ G + +L
Sbjct: 107 LIPDDKHPSEVSDWVKDRLAEEGIAPLDIAIVSSKNGYGINGIFKKIKHFFPDGVEAIVL 166
Query: 279 GSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDT 338
G+ NVGKS+ +N LL KY PGTTL ++ L DT
Sbjct: 167 GTTNVGKSSIVNRLL------GTKKVTVSKY-------PGTTLKSVKNQIPHTNIVLVDT 213
Query: 339 PGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLV 398
PG+ R + +V E + P + ++F V K L + W ++
Sbjct: 214 PGLIPEGRISDLVCEECNLKMVPSGEISRKTFKVK---------KGRALLIGELLWFKVL 264
Query: 399 RIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDR 458
D +P + Y K + + T+K E + PP +++ +K L+
Sbjct: 265 NED--NTMP--IFSLYAAKDVTFHETNTEKLKELLSSDRKDLFYPPCDNCRSQ-YKNLEM 319
Query: 459 ERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVE 518
IK + + ++ GLGWISV+ G L + V +PK
Sbjct: 320 -----IKKKIKVQAGEELVFKGLGWISVK----------------RGPLEIEVTLPKKAG 358
Query: 519 VFVRN 523
+ VRN
Sbjct: 359 ITVRN 363
>gi|332024512|gb|EGI64710.1| Uncharacterized protein C4orf14-like protein [Acromyrmex
echinatior]
Length = 532
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 78/237 (32%), Positives = 121/237 (51%), Gaps = 23/237 (9%)
Query: 95 NSAVAS--CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITA 152
NS+++S C GCGA L + PGY+ P LK+ + + + ++C RC + + +
Sbjct: 26 NSSISSIPCGGCGALLHCKDPALPGYL-PSELFLKRSNRELRVMICQRCHFMHYYNTTLE 84
Query: 153 VGGNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRD-LAGANPI 211
V VSADE + L +R +K ++ +VD+ DF S I L P+
Sbjct: 85 VK-----------VSADEYPKLLKVIRTKKCAVILMVDLTDFPCSIWPEINSVLHPLTPV 133
Query: 212 ILVVTKVDLLPKGTD--FNCVGDWV---VEATTKKKLNVLSVHLTSSKSLAGIVGVASEI 266
+V KVDLLP+ + F + D + +E+T KK N+ + L S+K+ GI + +++
Sbjct: 134 FVVGNKVDLLPQDSKYFFTHIKDCLLKAMESTKIKKENIRHIELISAKTGYGIEELINKL 193
Query: 267 QKEKKGR-DVYILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLG 322
K + DVYI+G NVGKS+ NALL+ + A + Q R S PGTTL
Sbjct: 194 HNIWKYKGDVYIIGCTNVGKSSLFNALLQSDYCKVQAVDLIQ--RATISPWPGTTLN 248
>gi|313901194|ref|ZP_07834682.1| ribosome biogenesis GTPase YqeH [Clostridium sp. HGF2]
gi|373121441|ref|ZP_09535309.1| ribosome biogenesis GTPase YqeH [Erysipelotrichaceae bacterium
21_3]
gi|422327456|ref|ZP_16408483.1| ribosome biogenesis GTPase YqeH [Erysipelotrichaceae bacterium
6_1_45]
gi|312954152|gb|EFR35832.1| ribosome biogenesis GTPase YqeH [Clostridium sp. HGF2]
gi|371663296|gb|EHO28486.1| ribosome biogenesis GTPase YqeH [Erysipelotrichaceae bacterium
6_1_45]
gi|371665459|gb|EHO30624.1| ribosome biogenesis GTPase YqeH [Erysipelotrichaceae bacterium
21_3]
Length = 360
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 105/398 (26%), Positives = 178/398 (44%), Gaps = 79/398 (19%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRC-RLLSHGHMITAVGGNGGY 159
C GCG LQ+S++ A GY + + C RC R+ + ++ ++
Sbjct: 6 CKGCGVVLQSSDAAAIGYTP-----------KMEADYCQRCFRIRHYDDVVISM------ 48
Query: 160 AGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARI-RDLAGANPIILVVTKV 218
KQ + +D + +K++ + AL+V +VD+ DF + L I R L G + I++V TK
Sbjct: 49 ---KQGIDSDAVLQKINAM---DALVVWVVDLFDFESNLLPGINRHLLGKD-ILMVATKR 101
Query: 219 DLLPKGTDFNCVGDWVVEATTKKKLNV--------LSVHLTSSKSLAGIVGVASEIQKEK 270
DLLP + +++ ++ + V L+ H + A + V + I +
Sbjct: 102 DLLPATLGNEKLSQFLLRRLKEEGILVQGIVVCGDLAAHARREDN-ASVDEVCAAIAHYR 160
Query: 271 KGRDVYILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFL 330
KGRDV ++G AN GKS +NA+ D ++ PGTTL I +
Sbjct: 161 KGRDVVVMGMANAGKSTLLNAIC------DGVDLTTSRH-------PGTTLDFNSI--AM 205
Query: 331 GGGKLYDTPGVHLHHRQAAVVHAED--LPALAPQSRLRGQSFAVISETETNNEFKSHGLN 388
G +LYDTPG L + + H +D L + P L+ + + + N+
Sbjct: 206 EGYQLYDTPG--LTRMDSLLTHVDDGLLKTVIPLKPLKARGYQL-----KGNQ------- 251
Query: 389 GFTIFWGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQ 448
T+ GGLVR+DL+ +C+ ++ + L ++ +KAD + + LTP IG
Sbjct: 252 --TLSLGGLVRLDLIGCEQVSCVAYFSER-LPLHRSKQEKADVLWAQHYDEILTPVIG-- 306
Query: 449 KAEGWKGLDRERLLEIKFEDTERPASDVAISGLGWISV 486
+RE + + + + DV I GLGW +
Sbjct: 307 --------EREHMKKFSYGHVQEHKLDVVIHGLGWFCI 336
>gi|87241448|gb|ABD33306.1| Protein C4orf14 homolog, related [Medicago truncatula]
Length = 616
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 88/324 (27%), Positives = 150/324 (46%), Gaps = 57/324 (17%)
Query: 211 IILVVTKVDLLPKGTDFNCVGDWVVEATTKKKLNVLS-VHLTSSKSLAGIVGVASEIQKE 269
++LV TKVDLLP + WV + LS V+L SS+ G+ V S ++
Sbjct: 298 LVLVATKVDLLPSQVSPTRLDRWVRHRASAGGAPKLSAVYLVSSRKDLGVRNVLSFVKDL 357
Query: 270 KKGR-DVYILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDA 328
R +V+++G+ N GKS INA KK G A+ + ++ VPGTTLG ++I
Sbjct: 358 AGPRGNVWVIGAQNAGKSTLINAFAKKEG--------AKVTKLTEAPVPGTTLGILRIAG 409
Query: 329 FLGG-GKLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGL 387
L K++DTPG+ + + ++ E + ++ GQ+ V
Sbjct: 410 ILSAKAKMFDTPGLLHPYLLSMRLNRE-------EQKMAGQAIHV--------------- 447
Query: 388 NGFTIFWGGLVRIDLLKVLPETC-LTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIG 446
GGL R+DL++ +T +T + ++ ++M + A+E + +GV L PPIG
Sbjct: 448 -------GGLARLDLIEASVQTMYVTVWASPNVSLHMGKIENANEIWNNHVGVRLQPPIG 500
Query: 447 KQKAEGWKGLDRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGE 506
+A G +ER +++ + DV+I+GLGW S+ GE
Sbjct: 501 NDRAAEL-GTWKEREVKVSGSSWDVNCMDVSIAGLGWFSL---------------GIQGE 544
Query: 507 LHLAVHVPKPVEVFVRNPMPVGKA 530
+ + +E+ +R P+ + +A
Sbjct: 545 ATMKLWTNDGIEITLREPLVLDRA 568
>gi|356503413|ref|XP_003520504.1| PREDICTED: uncharacterized protein yqeH-like [Glycine max]
Length = 635
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 154/326 (47%), Gaps = 46/326 (14%)
Query: 211 IILVVTKVDLLPKGTDFNCVGDWV---VEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQ 267
++LV TKVDLLP + WV + KLN V++ SSK G+ + S ++
Sbjct: 301 LVLVATKVDLLPSQVSPARLDRWVRNRARSGGAPKLN--GVYMVSSKKDLGVRNLLSFVK 358
Query: 268 KEKKGR-DVYILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQI 326
R +V+++G+ N GKS INA KK G A+ + ++ +PGTTLG ++I
Sbjct: 359 DLAGPRGNVWVIGAQNAGKSTLINAFAKKQG--------AKVTKLTEAPIPGTTLGILRI 410
Query: 327 DAFL-GGGKLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSH 385
L K++DTPG+ + + ++ ++ + + LR +++ + +
Sbjct: 411 AGVLPAKTKMFDTPGLLHPYLMSMRLNRDEQKMVEIRKELRPRTYRIKARQ--------- 461
Query: 386 GLNGFTIFWGGLVRIDLLKVLPETCL-TFYGPKSLQVYMVPTDKADEFYQKELGVTLTPP 444
I GGL R+DL++ ET T + ++ ++M + ADE ++ +G+ L PP
Sbjct: 462 -----AIHIGGLTRLDLVEASVETIYATVWASLNVSLHMGKIENADEVWRNHVGIRLQPP 516
Query: 445 IGKQKAEGWKGLDRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTS 504
G +A G +ER +++ + D+AI+GLGW S+
Sbjct: 517 TGNDRAAEL-GTWQEREVKVSGTSWDVNTIDIAIAGLGWFSL---------------CLK 560
Query: 505 GELHLAVHVPKPVEVFVRNPMPVGKA 530
GE + V VEV +R P+ + +A
Sbjct: 561 GEATTKLWVFHGVEVTLREPLVLDRA 586
>gi|357473899|ref|XP_003607234.1| hypothetical protein MTR_4g074870 [Medicago truncatula]
gi|355508289|gb|AES89431.1| hypothetical protein MTR_4g074870 [Medicago truncatula]
Length = 575
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 91/374 (24%), Positives = 172/374 (45%), Gaps = 47/374 (12%)
Query: 134 KTVLCGRCRLLSHGHMITAVGGNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVD 193
K V+C RC L H + F + KL+ R +++++ +VD VD
Sbjct: 146 KPVVCARCHSLRHYGKVKDPTVENLLP---DFDFDHTVGRKLASASRTRSVVLMVVDAVD 202
Query: 194 FNGSFLARIRDL----------------AGANP-IILVVTKVDLLPKGTDFNCVGDWVVE 236
F+GSF ++ +L +G P ++LVVTK+DLLP + W+ +
Sbjct: 203 FDGSFPRKVSNLVSKTIEDNYTAWKQGKSGNVPRVVLVVTKIDLLPSSLSPTRLEHWIRQ 262
Query: 237 -ATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGR-DVYILGSANVGKSAFINALLK 294
A + + S+H+ SS G+ + +I + R +V+ +G+ N GKS IN++ K
Sbjct: 263 RAREGGIIKITSLHMVSSLRDWGLKNLVEDIVELAGSRGNVWTVGAQNAGKSTLINSIGK 322
Query: 295 KMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFL-GGGKLYDTPGVHLHHRQAAVVHA 353
+G + ++ VPGTTLG ++++ L KL+DTPG+ ++ +
Sbjct: 323 HVG--------GKISHLTEAPVPGTTLGIVRVEGALPSQAKLFDTPGLLHPYQITTRLMR 374
Query: 354 EDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRIDLLKVLPETC-LT 412
E+ + L+ +++ + + G +I GL+R+D+ + +T +T
Sbjct: 375 EEQKLVYMTKELKPRTYRIKA--------------GHSIHIAGLMRLDVEETSLDTIYVT 420
Query: 413 FYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRERLLEIKFEDTERP 472
+ L ++M + A + ++ G L PPIG+++ + R R + +
Sbjct: 421 VWASPYLPLHMGKIENASKMFKDYFGHQLQPPIGEERVKELGNWVR-REFHVCGNSWDSS 479
Query: 473 ASDVAISGLGWISV 486
+ D+A +GLGW ++
Sbjct: 480 SVDIAAAGLGWFAI 493
>gi|299116827|emb|CBN74939.1| Lrc5, mitochondrial YqeH-related GTPase [Ectocarpus siliculosus]
Length = 738
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 105/399 (26%), Positives = 176/399 (44%), Gaps = 70/399 (17%)
Query: 134 KTVLCGRC-RLLSHGHMITAVGGNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIV 192
K ++C RC RL ++G + + G++ ++ E L +R+++ LI+ LVD+
Sbjct: 374 KLLVCQRCYRLRNYGSVEDTL--RPGFSD-SDLLTPQRFLELLGSIRKQRCLIIYLVDLF 430
Query: 193 DFNGSFLARIRDLAGANPIILVVTKVDLLPKGTDFNCVGDWVVEATTKKKL---NVLSVH 249
DF+G+FL + + G NP+++ KVDLLPK V WV + + L + VH
Sbjct: 431 DFHGTFLYNLPKITGNNPVLVAGNKVDLLPKDLKRQRVTKWVRDKCRESGLPDMEMRDVH 490
Query: 250 LTSSKSLAGIVGVASEIQKEKKGRDVYILGSANVGKSAFINALLKKMGERDPAAAMAQKY 309
L S K VG + K G A A+A +
Sbjct: 491 LVSCKH--------------------------GVGIPPLMRKGGKGGGRGGKAPAVAGRG 524
Query: 310 RPIQSAVPGTTLGPIQIDAFLGGGK-LYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQ 368
+ S+VPGTTL +++D LG + LYDTPG+ L H + ++AE+L A P+ ++
Sbjct: 525 VTV-SSVPGTTLDFLKVD--LGDKRALYDTPGLLLPHTLTSRLNAEELRAAIPKKKVDHV 581
Query: 369 SFAVISETETNNEFKSHGLNGFTIFWGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDK 428
+F V G + GGL R++++ P LTF+ ++++ +
Sbjct: 582 TFRVG--------------EGKVVLVGGLARVEVVTGRP-FLLTFFVSNDVRLHPTDARR 626
Query: 429 ADEFYQKEL--GVTLTPPIGKQKAEGWKGLDRERLLEIKFEDTERPASDVAISGLGWISV 486
D+ + + G + PP ++ + L +I A+DV I+GLGW+SV
Sbjct: 627 VDDMLSEHVGKGQMIFPPFDPERVDELGPLVPTD-FDIMGAGWRESAADVVIAGLGWVSV 685
Query: 487 EPVRRSIRNSDINLESTSGELHLAVHVPKPVEVFVRNPM 525
+ +G + L V P+ V V R P+
Sbjct: 686 ---------------TGAGPVTLRVWAPRGVLVMAREPL 709
>gi|160915285|ref|ZP_02077498.1| hypothetical protein EUBDOL_01294 [Eubacterium dolichum DSM 3991]
gi|158433084|gb|EDP11373.1| putative ribosome biogenesis GTPase YqeH [Eubacterium dolichum DSM
3991]
Length = 358
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 120/442 (27%), Positives = 187/442 (42%), Gaps = 106/442 (23%)
Query: 101 CYGCGAPLQTSESDAPGYV---DPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNG 157
C GCG LQ+ ++ A GY D D LC RC + H +T
Sbjct: 5 CKGCGVVLQSEDAKALGYTPKKDAD--------------LCQRCFRIIHYDDVTI----- 45
Query: 158 GYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARI-RDLAGANPIILVVT 216
KQ + + E+ +K+ + AL++ +VD+ DF + L I R L G + I+LV T
Sbjct: 46 ---SMKQGIDSYEVLQKIQAM---NALVLWVVDVFDFEANMLHGINRHLLGKD-IVLVAT 98
Query: 217 KVDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLA---------GIVGVASEIQ 267
K DLLP +G +++ + K+L ++ + LA I V I
Sbjct: 99 KRDLLPATLGNEKLGKFIL--SRLKELGIVVSGIVICGDLAKHAHEEYNDSIEQVEQAID 156
Query: 268 KEKKGRDVYILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQID 327
+KGRDV ++G AN GKS +N AM + S PGTTL ++
Sbjct: 157 YYRKGRDVVVMGMANAGKSTLLN-------------AMCDSRQLTTSRHPGTTL---DVN 200
Query: 328 AFLGGGK-LYDTPGVHLHHRQAAVVHAED--LPALAPQSRLRGQSFAVISETETNNEFKS 384
A L LYDTPG L + + H +D L + P L+ + + + +
Sbjct: 201 AILHHDYLLYDTPG--LTREDSLLTHVDDRLLKQVIPLKPLKPRVYQLYEAS-------- 250
Query: 385 HGLNGFTIFWGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPP 444
T+ GGLVR+DL+ +C+ ++ ++L+++ KA+E ++K L+P
Sbjct: 251 ------TMSLGGLVRLDLIGCEQVSCVAYFS-ENLKLHRSKQPKAEELWKKHYAEMLSPT 303
Query: 445 IGKQKAEGWKGLDRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTS 504
I L+ ++ E D + DV I GLGW + S
Sbjct: 304 IA--------SLEEQQRFEHHGVDGKL---DVVIHGLGWFCI-----------------S 335
Query: 505 GEL-HLAVHVPKPVEVFVRNPM 525
G+L + V+VPK V R M
Sbjct: 336 GKLDEIVVYVPKNGNVTFRKAM 357
>gi|322799594|gb|EFZ20872.1| hypothetical protein SINV_10706 [Solenopsis invicta]
Length = 778
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/242 (31%), Positives = 118/242 (48%), Gaps = 24/242 (9%)
Query: 95 NSAVAS--CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITA 152
NS ++S C GCGA L + PGY+ P LK+ + + ++C RC + + +
Sbjct: 266 NSNISSVPCGGCGALLHCKDQALPGYL-PSELFLKRSERELQIMICQRCHFMQYYNTTLE 324
Query: 153 VGGNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRD-LAGANPI 211
V VSADE E L ++ +K ++ +VD+ DF S I L P+
Sbjct: 325 VK-----------VSADEYPELLKVIKTKKCAVILMVDLTDFPCSIWPEINSVLHPYTPV 373
Query: 212 ILVVTKVDLLPKGTDF------NCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASE 265
+V K+DLLP+ + C+ V T KK N+ V L S+K+ GI + ++
Sbjct: 374 FVVGNKIDLLPQDSKHFFTHIKECLLKSVATGTGIKKENIKHVALVSAKTGYGIEELINK 433
Query: 266 IQKEKKGR-DVYILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPI 324
+ K K + DVY++G NVGKS+ NALL+ + A + Q R S PGTTL +
Sbjct: 434 LHKIWKYKGDVYVIGCTNVGKSSLFNALLQSDYCKVQAVDLVQ--RATISPWPGTTLNLL 491
Query: 325 QI 326
+
Sbjct: 492 KF 493
>gi|310778332|ref|YP_003966665.1| ribosome biogenesis GTPase YqeH [Ilyobacter polytropus DSM 2926]
gi|309747655|gb|ADO82317.1| ribosome biogenesis GTPase YqeH [Ilyobacter polytropus DSM 2926]
Length = 370
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 103/435 (23%), Positives = 184/435 (42%), Gaps = 80/435 (18%)
Query: 96 SAVASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRC-RLLSHGHMITAVG 154
+ + C GCG LQ S+ G+V E +K+ + C RC ++ ++G +
Sbjct: 2 AKIKKCIGCGIELQNESSEKQGFVPKSVLESRKE------IYCQRCFKIKNYGEYLPVEM 55
Query: 155 GNGGYAG--GKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPII 212
Y GKQ AD +++ + DI+DF GSF I D+ I
Sbjct: 56 TKEDYRKEVGKQAERAD--------------VVLAVFDIIDFEGSFDDEILDILREKDSI 101
Query: 213 LVVTKVDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQK-EKK 271
+ + K+DL+P + V DWV E + + L + + S+KS G+ G+ +++
Sbjct: 102 IAINKLDLVPGEKHPSEVSDWVKERLADEGIAPLDIAILSAKSGYGVNGIIRKLRHFFPD 161
Query: 272 GRDVYILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLG 331
G +LG+ NVGKS+ IN LL G++ + S PGTTL ++ +
Sbjct: 162 GAKAMVLGTTNVGKSSIINGLL---GDK----------KVTTSKYPGTTLKSLE--NIIS 206
Query: 332 GGK--LYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNG 389
G K L DTPG+ R + +V E + P + + ++F + +
Sbjct: 207 GTKLTLIDTPGLIPEGRVSDMVCEECNLKIVPANEISRKTFKLEKDR------------- 253
Query: 390 FTIFWGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQK 449
+ +GGL+ + ++ + + + K + + + ++ + G ++PP K +
Sbjct: 254 -VLMFGGLLWMKVMNS-EKAIFSAFASKDVSFHETNEGRLEDLLRDHSGDAISPPCEKCR 311
Query: 450 AEGWKGLDRERLLEIKFED-TERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELH 508
D L +K E+ T ++ GLGWISV+ G L
Sbjct: 312 -------DEYAALPMKKEEWTVESGEELVFKGLGWISVK----------------RGPLT 348
Query: 509 LAVHVPKPVEVFVRN 523
+ V +P+ E+ +R+
Sbjct: 349 IEVTIPEGAEIILRD 363
>gi|357153475|ref|XP_003576463.1| PREDICTED: uncharacterized protein yqeH-like [Brachypodium
distachyon]
Length = 584
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 114/462 (24%), Positives = 197/462 (42%), Gaps = 93/462 (20%)
Query: 92 LKVNSAVASCYGCGAPLQTSESDAPGYVD------PD---------------TYELKKKH 130
L SA +C GCG +Q+++ PG+ + PD + LK H
Sbjct: 67 LPAVSANGTCPGCGIAMQSADPALPGFFNLPSPKSPDYRARLAPVTADDTQISTSLKSGH 126
Query: 131 ---------------------HQFKTVLCGRCRLLSH-GHMITAVGGNGGYAGGKQFVSA 168
+ K ++C RC L H GH+ FV+A
Sbjct: 127 LREGQENSRGDEAAGVEVEAKRESKVLVCARCHSLRHYGHVKRPDAEV--LLPDFDFVAA 184
Query: 169 DELREKLSHLRREKALIVKLVDIVDFNGSFL------------ARIRDLAGANPI----- 211
+ +L+ ++L++ L D DF+GSF A D P
Sbjct: 185 --VGPRLASPSGARSLVLLLADASDFDGSFPRAVARLVAAAGEAHQEDWKRGAPANLPRA 242
Query: 212 ILVVTKVDLLPKGT----DFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQ 267
+LVVTK+DLLP + D + A L + VHL S+ G+ + + ++
Sbjct: 243 VLVVTKLDLLPTPSLSPDDVHAWAQARARAGAGADLQLAGVHLVSAARGWGVRDLLNHVR 302
Query: 268 KEKKGR-DVYILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQI 326
+ R V+ +G+ NVGKS +NA+ + G A K ++ VPGTTLG I++
Sbjct: 303 ELAGARGKVWAVGARNVGKSTLLNAIARCSG------AEGGKIL-TEAPVPGTTLGVIRV 355
Query: 327 DAFLGG-GKLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSH 385
D LG KL+DTPG+ H+ + + E+ + + ++ +++ + +
Sbjct: 356 DGILGAQAKLFDTPGLLHGHQLTSRLTLEEQKIVQVRKEMQPRTYRIKA----------- 404
Query: 386 GLNGFTIFWGGLVRIDLLKV-LPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPP 444
G +I GGLVR+D+ ++ + +T + + ++M T+ A + G+ L PP
Sbjct: 405 ---GQSIHIGGLVRLDIEELTVGSIYVTVWASPLVPLHMGKTENAASMMKDHFGLQLQPP 461
Query: 445 IGKQKAEGWKGLDRERLLEIKFEDTERPASDVAISGLGWISV 486
IG+++ R++ ++ + + D+AISGLGW +
Sbjct: 462 IGQKRVSELGKWVRKQ-FKVSGNSWDSNSMDIAISGLGWYGI 502
>gi|309775711|ref|ZP_07670709.1| ribosome biogenesis GTPase YqeH [Erysipelotrichaceae bacterium
3_1_53]
gi|308916550|gb|EFP62292.1| ribosome biogenesis GTPase YqeH [Erysipelotrichaceae bacterium
3_1_53]
Length = 359
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 102/398 (25%), Positives = 182/398 (45%), Gaps = 79/398 (19%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRC-RLLSHGHMITAVGGNGGY 159
C GCG LQ S++++ GY P + + C RC R+ + ++ ++
Sbjct: 5 CKGCGVVLQNSDANSIGYT-P----------KMEADYCQRCFRIRHYDDVVISM------ 47
Query: 160 AGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARI-RDLAGANPIILVVTKV 218
KQ + +D + K++ + AL+V +VD+ DF + L I R L G + I++V TK
Sbjct: 48 ---KQGIDSDAVLRKINAM---DALVVWVVDLFDFESNLLPGINRHLLGKD-ILMVATKR 100
Query: 219 DLLPKGTDFNCVGDWVVEATTKKKLNV--------LSVHLTSSKSLAGIVGVASEIQKEK 270
DLLP + + +++ ++ + V L+ H ++ A + V S I +
Sbjct: 101 DLLPATLGNDKLSAFMLRRLKEEGIVVQGIVVCGDLAAHARREEN-ASVDEVRSAIAHYR 159
Query: 271 KGRDVYILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFL 330
+ RDV ++G AN GKS +NA+ D ++ PGTTL I +
Sbjct: 160 RERDVVVMGMANAGKSTLLNAIC------DHTDLTTSRH-------PGTTLDFNSI--AM 204
Query: 331 GGGKLYDTPGVHLHHRQAAVVHAED--LPALAPQSRLRGQSFAVISETETNNEFKSHGLN 388
G +LYDTPG L + + H ++ L + P L+ + + + N+
Sbjct: 205 EGYQLYDTPG--LTRMDSLLTHVDERLLKTVIPLKPLKARGYQL-----KGNQ------- 250
Query: 389 GFTIFWGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQ 448
T+ GGLVR+DL+ +C+ ++ + L+++ +KAD+ +++ L+P IG+Q
Sbjct: 251 --TLSLGGLVRLDLIGCESVSCVAYFSER-LKLHRSKQEKADDLWRQHYDEILSPVIGEQ 307
Query: 449 KAEGWKGLDRERLLEIKFEDTERPASDVAISGLGWISV 486
K + + + + DV I GLGW +
Sbjct: 308 KD----------MKKFSYGHVQEYKVDVVIHGLGWFCI 335
>gi|346314270|ref|ZP_08855791.1| ribosome biogenesis GTPase YqeH [Erysipelotrichaceae bacterium
2_2_44A]
gi|345906628|gb|EGX76352.1| ribosome biogenesis GTPase YqeH [Erysipelotrichaceae bacterium
2_2_44A]
Length = 360
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 103/398 (25%), Positives = 178/398 (44%), Gaps = 79/398 (19%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRC-RLLSHGHMITAVGGNGGY 159
C GCG LQ+S++ A GY + + C RC R+ + ++ ++
Sbjct: 6 CKGCGVVLQSSDAAAIGYTP-----------KMEADYCQRCFRIRHYDDVVISM------ 48
Query: 160 AGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARI-RDLAGANPIILVVTKV 218
KQ + +D + +K++ + AL+V +VD+ DF + L I R L G + I++V TK
Sbjct: 49 ---KQGIDSDAVLQKINAM---DALVVWVVDLFDFESNLLPGINRHLLGKD-ILMVATKR 101
Query: 219 DLLPKGTDFNCVGDWVVEATTKKKLNV--------LSVHLTSSKSLAGIVGVASEIQKEK 270
DLLP + +++ ++ + V L+ H + A + V + I +
Sbjct: 102 DLLPATLGNEKLSQFLLRRLKEEGILVQGIVVCGDLAAHARREDN-ASVDEVCAAIAHYR 160
Query: 271 KGRDVYILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFL 330
K RDV ++G AN GKS +NA+ D ++ PGTTL I +
Sbjct: 161 KERDVVVMGMANAGKSTLLNAIC------DGVDLTTSRH-------PGTTLDFNSI--AM 205
Query: 331 GGGKLYDTPGVHLHHRQAAVVHAED--LPALAPQSRLRGQSFAVISETETNNEFKSHGLN 388
G +LYDTPG L + + H +D L + P L+ + + + N+
Sbjct: 206 EGYQLYDTPG--LTRMDSLLTHVDDGLLKTVIPLKPLKARGYQL-----KGNQ------- 251
Query: 389 GFTIFWGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQ 448
T+ GGLVR+DL++ +C+ ++ + L ++ +KAD + + L+P IG
Sbjct: 252 --TLSLGGLVRLDLIRCEQVSCVAYFSER-LPLHRSKQEKADVLWAQHYDEILSPVIG-- 306
Query: 449 KAEGWKGLDRERLLEIKFEDTERPASDVAISGLGWISV 486
+RE + + + + DV I GLGW +
Sbjct: 307 --------EREHMKKFSYGHVQEHKLDVVIHGLGWFCI 336
>gi|389843658|ref|YP_006345738.1| GTPase [Mesotoga prima MesG1.Ag.4.2]
gi|387858404|gb|AFK06495.1| putative GTPase [Mesotoga prima MesG1.Ag.4.2]
Length = 368
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 111/434 (25%), Positives = 175/434 (40%), Gaps = 87/434 (20%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA LQ + GY+ E + K VLC RC L+ H G +
Sbjct: 3 CGGCGAELQHDDPAGLGYISRSVME--SRLQSGKQVLCRRCFLIKH---------YGSLS 51
Query: 161 GGKQFV-SADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVD 219
+ V S D L+E L + ++ ++DI DF+G+ I L + + ++ K+D
Sbjct: 52 EDDRVVHSIDNLKEYLDLAQD----VIYVIDISDFDGTCRRDILRLLKEHTVHYILNKID 107
Query: 220 LLPKGTDFNCVGDWV-----VEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRD 274
LLP+ + + DW V T + ++VL H KSL + ASE +
Sbjct: 108 LLPREVKIDEIRDWAASMLKVPKETVRPVSVLKNH--GLKSLFSYLKSASE--------E 157
Query: 275 VYILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGK 334
+G NVGKS+ +N L+ Q S PGTT+
Sbjct: 158 FVSVGVTNVGKSSILNGLI-------------QSEELTVSRFPGTTVKVASKKVGGSAFT 204
Query: 335 LYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFW 394
+YDTPG+ R ++ ED P+ +L + + H + T+F
Sbjct: 205 VYDTPGIFTKDRITDLLSVEDQSRFLPRKKL------------NKSTIQFHDVR--TVFL 250
Query: 395 GGLVRIDLL-KVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGK--QKAE 451
GG VR+D+ + P + P+S+ V+ +D +E + + G L PP + +
Sbjct: 251 GGFVRLDVKNESDPVGIFHVFVPESVTVHETNSDTGNEEWDRWYGGILKPPFSESIRSNY 310
Query: 452 GWKGLDRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAV 511
WK +R RL+ ++ I G+GWI+V G L +AV
Sbjct: 311 KWKS-ERFRLI---------TGQELHIFGMGWINV----------------AKGPLTIAV 344
Query: 512 HVPKPVEVFVRNPM 525
P+ V VR +
Sbjct: 345 TTPEGVATKVRKGL 358
>gi|359481892|ref|XP_002274571.2| PREDICTED: uncharacterized protein yqeH-like [Vitis vinifera]
Length = 641
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 87/326 (26%), Positives = 157/326 (48%), Gaps = 46/326 (14%)
Query: 211 IILVVTKVDLLPKGTDFNCVGDWV---VEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQ 267
++LV TKVDLLP + WV +A KL+ V+L S++ G+ + S I+
Sbjct: 311 LVLVATKVDLLPSQISPTRLDRWVRNRAKAGGAPKLS--GVYLVSARKDLGVRNLLSFIK 368
Query: 268 KEKKGR-DVYILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQI 326
+ R +V+++GS N GKS IN K+ G + + ++AVPGTTLG ++I
Sbjct: 369 ELAGPRGNVWVIGSQNAGKSTLINTFAKREG--------VKLTKLTEAAVPGTTLGILRI 420
Query: 327 DAFLGG-GKLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSH 385
L K+YDTPG+ + + ++ ++ + L+ +++ + +
Sbjct: 421 GGILSAKAKMYDTPGLLHPYLMSMRLNRDEQKMAEIRKELQPRTYRMKA----------- 469
Query: 386 GLNGFTIFWGGLVRIDLLKVLPETC-LTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPP 444
G + GGL+R+DL + ET +T + ++ ++M + ADE ++K +GV L PP
Sbjct: 470 ---GQAVHVGGLMRLDLNQASVETIYVTIWASPNVSLHMGKIENADEIWRKHVGVRLQPP 526
Query: 445 IGKQKAEGWKGLDRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTS 504
+ + G E+ +++ + + D+A++GLGW S+
Sbjct: 527 VRVDRVSE-IGKWEEQEIKVSGASWDVNSIDIAVAGLGWFSL---------------GLK 570
Query: 505 GELHLAVHVPKPVEVFVRNPMPVGKA 530
GE LA+ +EV +R P+ + +A
Sbjct: 571 GEATLALWTYDGIEVILREPLVLDRA 596
>gi|297739886|emb|CBI30068.3| unnamed protein product [Vitis vinifera]
Length = 637
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 87/326 (26%), Positives = 157/326 (48%), Gaps = 46/326 (14%)
Query: 211 IILVVTKVDLLPKGTDFNCVGDWV---VEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQ 267
++LV TKVDLLP + WV +A KL+ V+L S++ G+ + S I+
Sbjct: 307 LVLVATKVDLLPSQISPTRLDRWVRNRAKAGGAPKLS--GVYLVSARKDLGVRNLLSFIK 364
Query: 268 KEKKGR-DVYILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQI 326
+ R +V+++GS N GKS IN K+ G + + ++AVPGTTLG ++I
Sbjct: 365 ELAGPRGNVWVIGSQNAGKSTLINTFAKREG--------VKLTKLTEAAVPGTTLGILRI 416
Query: 327 DAFLGG-GKLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSH 385
L K+YDTPG+ + + ++ ++ + L+ +++ + +
Sbjct: 417 GGILSAKAKMYDTPGLLHPYLMSMRLNRDEQKMAEIRKELQPRTYRMKA----------- 465
Query: 386 GLNGFTIFWGGLVRIDLLKVLPETC-LTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPP 444
G + GGL+R+DL + ET +T + ++ ++M + ADE ++K +GV L PP
Sbjct: 466 ---GQAVHVGGLMRLDLNQASVETIYVTIWASPNVSLHMGKIENADEIWRKHVGVRLQPP 522
Query: 445 IGKQKAEGWKGLDRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTS 504
+ + G E+ +++ + + D+A++GLGW S+
Sbjct: 523 VRVDRVSE-IGKWEEQEIKVSGASWDVNSIDIAVAGLGWFSL---------------GLK 566
Query: 505 GELHLAVHVPKPVEVFVRNPMPVGKA 530
GE LA+ +EV +R P+ + +A
Sbjct: 567 GEATLALWTYDGIEVILREPLVLDRA 592
>gi|242044516|ref|XP_002460129.1| hypothetical protein SORBIDRAFT_02g023120 [Sorghum bicolor]
gi|241923506|gb|EER96650.1| hypothetical protein SORBIDRAFT_02g023120 [Sorghum bicolor]
Length = 597
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 99/403 (24%), Positives = 183/403 (45%), Gaps = 52/403 (12%)
Query: 108 LQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYAGGKQFVS 167
L+ S SD P E+ + K ++C RC L H + FV+
Sbjct: 137 LEPSGSDKPAAA---AAEMADSKGEGKVLVCARCHSLRHYGRVKHPDAER-LLPDFDFVA 192
Query: 168 ADELREKLSHLRREKALIVKLVDIVDFNGSFL------------ARIRDLAGANPI---- 211
A + +L+ ++L++ L D DF+GSF A D P
Sbjct: 193 A--VGPRLASPSGARSLVLLLADASDFDGSFPRAVARLVAAAGEAHSADWKHGAPANLPR 250
Query: 212 -ILVVTKVDLLPKGT----DFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEI 266
+LVVTK+DLLP + D + A L + VHL S+ G+ + +
Sbjct: 251 ALLVVTKLDLLPTPSLSPDDVHAWAHSRARAGAGSDLRLAGVHLVSAARGWGVRDLLEHV 310
Query: 267 QKEKKGR-DVYILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQ 325
++ R +V+ +G+ NVGKS +NA+ + G +A + ++ VPGTTL I+
Sbjct: 311 RELAGTRGNVWAVGARNVGKSTLLNAIARCSG-------IAGRPTLTEAPVPGTTLDVIK 363
Query: 326 IDAFLGG-GKLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKS 384
+D LG KL+DTPG+ H+ + + +E++ + + + +++ + +
Sbjct: 364 LDGVLGAQAKLFDTPGLLHGHQLTSRLTSEEMKLVQVRKEMSPRTYRIKT---------- 413
Query: 385 HGLNGFTIFWGGLVRIDLLKV-LPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTP 443
G +I GGLVR+D+ ++ + +T + + ++M T+ A ++ G+ L P
Sbjct: 414 ----GQSIHIGGLVRLDVEELTVGSIYVTVWAAPLVPLHMGKTENAAALMKEHFGLQLQP 469
Query: 444 PIGKQKAEGWKGLDRERLLEIKFEDTERPASDVAISGLGWISV 486
PIG+++ + R++ ++ + + D+AI+G+GW +
Sbjct: 470 PIGQEQVKELGKWVRKQ-FKVSGNSWDMNSKDIAIAGIGWFGI 511
>gi|195024484|ref|XP_001985881.1| GH21055 [Drosophila grimshawi]
gi|193901881|gb|EDW00748.1| GH21055 [Drosophila grimshawi]
Length = 649
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 72/237 (30%), Positives = 115/237 (48%), Gaps = 22/237 (9%)
Query: 93 KVNSAVASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITA 152
KV + C GCGA L + PGY+ + ++ + + +T+ C RC L H ++
Sbjct: 129 KVAPSNVPCNGCGAHLHCVSTSMPGYIPSEIFK-GRTQMELQTITCQRCHFLQHYNIALD 187
Query: 153 VGGNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGA-NPI 211
V V E +S ++ + AL + +VD++DF S ++ + GA P+
Sbjct: 188 VE-----------VPPSVYVETISRIQDKYALAIIIVDLLDFPSSIWPGMQQVLGAKRPV 236
Query: 212 ILVVTKVDLLPKGTD------FNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASE 265
LV KVDLLP+ ++ C+ +E LN+ +V L S+K+ GI + ++
Sbjct: 237 FLVGNKVDLLPRDSNGYLTHVKRCLKQQFIEHGGFDALNIKNVSLISAKTGFGIEELITQ 296
Query: 266 IQKEKKGR-DVYILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTL 321
+ K + + DVY+LG NVGKS+ N LL R A + +K A PGTTL
Sbjct: 297 LHKNWQYKGDVYLLGCTNVGKSSLFNILLNSDYCRPEATELVRK--ATTCAWPGTTL 351
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 110/256 (42%), Gaps = 54/256 (21%)
Query: 282 NVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPGV 341
NVG++ + + D A AMA +PI TTL + + + +YDTPGV
Sbjct: 405 NVGRT------FDRRTDVDDAFAMAGGTQPI------TTLNERKKE-YREARWVYDTPGV 451
Query: 342 HLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRID 401
+ ++ ++L L P L+ ++ V + ++F GGL R+D
Sbjct: 452 MQPDQLTPMLTTQELLQLQPTRMLKPRAVRVAPK--------------MSLFLGGLARVD 497
Query: 402 LLKVLPETCLTF-YGPKSLQVYMVPTDKADEFYQKELGVTL--TPPIGK--QKAEGWKGL 456
LL E F + ++L + + T +AD Y++ LG +L P G+ ++ + W GL
Sbjct: 498 LLDCNQEWLKLFVFAAETLPLLITDTQQADAIYKRYLGTSLLGLPISGEDDERLQRWPGL 557
Query: 457 ---DRERLL-----EIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELH 508
DR+ L+ E +F + + D+ +S GW+ + L + E
Sbjct: 558 QCMDRDILVQNGASENRFAEKQL-NCDITLSSAGWLGL-------------LLPENTESS 603
Query: 509 LAVHVPKPVEVFVRNP 524
+ PK ++VR P
Sbjct: 604 WRLWTPKATGIYVRKP 619
>gi|340752873|ref|ZP_08689667.1| ribosome biogenesis GTPase YqeH [Fusobacterium sp. 2_1_31]
gi|422316805|ref|ZP_16398183.1| ribosome biogenesis GTPase YqeH [Fusobacterium periodonticum D10]
gi|229422666|gb|EEO37713.1| ribosome biogenesis GTPase YqeH [Fusobacterium sp. 2_1_31]
gi|404590606|gb|EKA92965.1| ribosome biogenesis GTPase YqeH [Fusobacterium periodonticum D10]
Length = 366
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 107/427 (25%), Positives = 182/427 (42%), Gaps = 78/427 (18%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG LQ ++ D GY P + + K+ + C RC L H G Y+
Sbjct: 5 CVGCGIELQNTDKDLQGYT-PKSIDSKEDMY------CQRCFQLKH---------YGKYS 48
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
K ++ ++ ++++ L + L++ + DI+DF GSF I D+ I+VV K+DL
Sbjct: 49 TNK--MTREDYKKEVGKLLDDVKLVIAVFDIIDFEGSFDVEILDILREKDSIVVVNKLDL 106
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQK-EKKGRDVYILG 279
+P + V +WV + ++ + L + + S+K+ G+ G+ +I+ G + ++G
Sbjct: 107 IPDEKHPSEVANWVKDRLAEESIAPLDIAIVSTKNGYGVNGIFKKIKHFYPDGVNAMVIG 166
Query: 280 SANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTL-GPIQIDAFLGGGKLYDT 338
NVGKS+ IN LL G+R A KY PGTT+ + + F G LYDT
Sbjct: 167 VTNVGKSSVINRLL---GKR---IATVSKY-------PGTTIKNTLNMIPFTNIG-LYDT 212
Query: 339 PGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLV 398
PG+ R + ++ + P + ++F + I LV
Sbjct: 213 PGLIPEGRASDLLCDSCAQKIIPAGEISRKTFKAKYDR--------------IIMIDNLV 258
Query: 399 RIDLL---KVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKG 455
+I +L +V P Y K ++ + ++A E E G P + E K
Sbjct: 259 KIRVLNDEEVKP--IFAIYAAKDVKFHETTIERAKEL---EEGNFFDIPCECCRDEYNKH 313
Query: 456 LDRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPK 515
+ L IK ++ GLGW+SV+ G L + V + +
Sbjct: 314 KKITKTLTIK------TGEELVFKGLGWVSVK----------------RGPLKIEVTLAE 351
Query: 516 PVEVFVR 522
+E+ +R
Sbjct: 352 EIEISIR 358
>gi|294782272|ref|ZP_06747598.1| ribosome biogenesis GTPase YqeH [Fusobacterium sp. 1_1_41FAA]
gi|294480913|gb|EFG28688.1| ribosome biogenesis GTPase YqeH [Fusobacterium sp. 1_1_41FAA]
Length = 366
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 107/427 (25%), Positives = 182/427 (42%), Gaps = 78/427 (18%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG LQ ++ D GY P + + K+ + C RC L H G Y+
Sbjct: 5 CVGCGIELQNTDKDLQGYT-PKSIDSKEDTY------CQRCFQLKH---------YGKYS 48
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
K ++ ++ ++++ L + L++ + DI+DF GSF I D+ I+VV K+DL
Sbjct: 49 TNK--MTREDYKKEVGKLLDDVKLVIAVFDIIDFEGSFDVEILDILREKDSIVVVNKLDL 106
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQK-EKKGRDVYILG 279
+P + V +WV + ++ + L + + S+K+ G+ G+ +I+ G + ++G
Sbjct: 107 IPDEKHPSEVANWVKDRLAEESIAPLDIAIVSTKNGYGVNGIFKKIKHFYPDGVNAMVIG 166
Query: 280 SANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTL-GPIQIDAFLGGGKLYDT 338
NVGKS+ IN LL G+R A KY PGTT+ + + F G LYDT
Sbjct: 167 VTNVGKSSVINRLL---GKR---IATVSKY-------PGTTIKNTLNMIPFTNIG-LYDT 212
Query: 339 PGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLV 398
PG+ R + ++ + P + ++F + I LV
Sbjct: 213 PGLIPEGRASDLLCDSCAQKIIPAGEISRKTFKAKYDR--------------IIMIDNLV 258
Query: 399 RIDLL---KVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKG 455
+I +L +V P Y K ++ + ++A E E G P + E K
Sbjct: 259 KIRVLNDEEVKP--IFAIYAAKDVKFHETTIERAKEL---EEGNFFDIPCECCRDEYNKH 313
Query: 456 LDRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPK 515
+ L IK ++ GLGW+SV+ G L + V + +
Sbjct: 314 KKITKTLTIK------TGEELVFKGLGWVSVK----------------RGPLKIEVTLAE 351
Query: 516 PVEVFVR 522
+E+ +R
Sbjct: 352 EIEISIR 358
>gi|340751857|ref|ZP_08688667.1| ribosome biogenesis GTPase YqeH [Fusobacterium mortiferum ATCC
9817]
gi|229420821|gb|EEO35868.1| ribosome biogenesis GTPase YqeH [Fusobacterium mortiferum ATCC
9817]
Length = 371
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 106/427 (24%), Positives = 174/427 (40%), Gaps = 72/427 (16%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG LQ+ + GY+ E +H+ C RC + G Y
Sbjct: 6 CIGCGIELQSDYPEKNGYLPAAKLEEPGEHY------CQRC---------FKIKNYGKYM 50
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
+ ++ D+ R+ + + + + DI+DF GSF I D+ I+V+ K+DL
Sbjct: 51 PVR--LTRDDYRKVVQEEMVNSQVAIAVFDIIDFEGSFDDEILDVLREMDSIVVINKLDL 108
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQK-EKKGRDVYILG 279
+P + V +WV ++ + L + + SSK+ GI G+ +I+ G + +LG
Sbjct: 109 IPDEKHPSEVANWVKVRLAEEGIAPLDIAIVSSKNGYGINGIFKKIKHFYPDGVEALVLG 168
Query: 280 SANVGKSAFINAL--LKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYD 337
NVGKS+ +N L LKK+ KY PGTTL ++ L D
Sbjct: 169 VTNVGKSSIVNRLLGLKKV--------TVSKY-------PGTTLKSVRNQIPHTKITLVD 213
Query: 338 TPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGL 397
TPG+ R + +V + P + + ++F + K L + W +
Sbjct: 214 TPGLIPEGRISDLVCENCNLKMVPANEISRKTFKM---------SKGRALIIGELLWFRI 264
Query: 398 VRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLD 457
+ D +K + + Y K + + DK E + + G LTPP +D
Sbjct: 265 LNEDEMKPI----FSLYAAKDVTFHETNEDKLKELLKTDRGDLLTPPCE-------NCID 313
Query: 458 RERLLE-IKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKP 516
R LE IK T + ++ GLGWISV+ G L + + PK
Sbjct: 314 EYRKLEKIKHRVTVKTGEELVFKGLGWISVK----------------RGPLEIEITAPKE 357
Query: 517 VEVFVRN 523
+ +R+
Sbjct: 358 AGIVIRD 364
>gi|344205187|ref|YP_004790329.1| ribosome biogenesis GTPase YqeH [Mycoplasma putrefaciens KS1]
gi|343957110|gb|AEM68825.1| ribosome biogenesis GTPase YqeH [Mycoplasma putrefaciens KS1]
Length = 363
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 100/403 (24%), Positives = 184/403 (45%), Gaps = 63/403 (15%)
Query: 98 VASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRC-RLLSHGHMITAVGGN 156
+ SC GCG+ LQ + G+V+ H + C RC ++ ++ +++
Sbjct: 1 MKSCLGCGSVLQNQDKLQAGFVE-------NIDHAY----CLRCFKIKNYNQLVS----- 44
Query: 157 GGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVT 216
A G+ F D + ++L E + ++D+ D GS +A I + + + LV+
Sbjct: 45 NEIAVGEFF---DRI-QRLVDQADEDLIFYYVLDVFDIEGSRIAEIEKVIKKHTVKLVIN 100
Query: 217 KVDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVY 276
K+DLLPK + + +++ + LN + L SSK+L + SEIQ + + Y
Sbjct: 101 KIDLLPKSVKLSKIKNYISKLFANTSLNNADILLVSSKTLNLAEPLFSEIQNNNQYQQ-Y 159
Query: 277 ILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLG--PIQIDAFLGGGK 334
+G++NVGKS+ IN +L ++ P R + S TTL I++DA
Sbjct: 160 FIGASNVGKSSLINKML-ELSNLSP--------RIVVSNFLNTTLEFICIRLDA---NTV 207
Query: 335 LYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFW 394
+YD+ G+ + + ++ + L + L+ S+ + +NN +IF+
Sbjct: 208 IYDSAGITRSNSISNLMDQKFLKYCYFKQELKQFSYRL----SSNN----------SIFF 253
Query: 395 GGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWK 454
G+ D + +T Y K++ ++ T+ A ++++K V L P I QK ++
Sbjct: 254 AGVAWFD-YQSETKTDFHIYVNKNINLHRTQTNNAIDYWKKNHKV-LIPHISSQKINTYQ 311
Query: 455 GLDRERLLEIKFEDTERPASDVAISGLGWISV---EPVRRSIR 494
+ L +F D++ISGLGWI+ EP+ I+
Sbjct: 312 FSFTKNDLNQEF--------DISISGLGWINFVVKEPLNIKIK 346
>gi|404366403|ref|ZP_10971786.1| ribosome biogenesis GTPase YqeH [Fusobacterium ulcerans ATCC 49185]
gi|313689249|gb|EFS26084.1| ribosome biogenesis GTPase YqeH [Fusobacterium ulcerans ATCC 49185]
Length = 370
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 102/425 (24%), Positives = 174/425 (40%), Gaps = 68/425 (16%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRC-RLLSHGHMITAVGGNGGY 159
C GCG LQ+ +++ GY+ + H+ C RC ++ ++G +
Sbjct: 5 CVGCGIELQSEDANKSGYLPEGKLQENGDHY------CQRCFKIKNYGKYMPV------- 51
Query: 160 AGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVD 219
++ D+ R+++ + L V + DI+DF GSF I D+ I+V+ K+D
Sbjct: 52 -----RLNKDDYRKEVQEAMQYSKLAVAVFDIIDFEGSFDDEILDVLREMDSIVVINKLD 106
Query: 220 LLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQK-EKKGRDVYIL 278
L+P + V DWV + ++ + L + + SSK+ GI G+ +I+ G + +L
Sbjct: 107 LIPDDKHPSEVSDWVKDRLAEEGIAPLDIAIVSSKNGYGINGIFKKIKHFYPDGVEAIVL 166
Query: 279 GSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDT 338
G NVGKS+ +N LL KY PGTTL ++ L DT
Sbjct: 167 GVTNVGKSSIVNRLL------GAKKVTVSKY-------PGTTLKSVKNQIPHTNIVLVDT 213
Query: 339 PGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLV 398
PG+ R + +V E + P + ++F V K L + W ++
Sbjct: 214 PGLIPEGRISDLVCEECNLKMVPSGEISRKTFKV---------KKGRALLIGELLWFRVL 264
Query: 399 RIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDR 458
D +P + Y K + + T++ E L PP + +
Sbjct: 265 NED--DTMP--IFSLYAAKDVTFHETNTERLKELLTSGRKDLLYPPCDNCRDQ------Y 314
Query: 459 ERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVE 518
++L IK + + ++ GLGWISV+ G L + V +PK
Sbjct: 315 KKLEMIKKKIKVQAGEELVFKGLGWISVK----------------RGPLEIEVTLPKEAG 358
Query: 519 VFVRN 523
+ VR+
Sbjct: 359 IIVRD 363
>gi|223986364|ref|ZP_03636371.1| hypothetical protein HOLDEFILI_03682 [Holdemania filiformis DSM
12042]
gi|223961655|gb|EEF66160.1| hypothetical protein HOLDEFILI_03682 [Holdemania filiformis DSM
12042]
Length = 353
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 122/410 (29%), Positives = 172/410 (41%), Gaps = 94/410 (22%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA LQ GY + +VLC RC L+H + G
Sbjct: 6 CQGCGALLQHDRPQEAGYTP-----------KAGSVLCQRCFRLTHYDDLQFSMREG--- 51
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARI-RDLAGANPIILVVTKVD 219
+ D + L+ + ALI+ +VD+ DF S L + R L G + +I+V TK D
Sbjct: 52 -----IDPDRI---LAQIHAMDALILWVVDLFDFEASLLEGMNRHLFGKD-VIVVGTKRD 102
Query: 220 LLPKGTDFNCVGDWVVEATTKKKLNVLSVHL----TSSKSLAGIVGVASEIQKEKKGRDV 275
LLP+ VG + +L L +H+ + K++ G + KG+DV
Sbjct: 103 LLPE-----TVGSEKLAKFVYGRLKELGIHVKGLVVTGKNIPGGPEEVLRAIEWAKGKDV 157
Query: 276 YILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKL 335
++G AN GKS +NAL+ D + +Y PGTTL +D + G +
Sbjct: 158 VVMGMANAGKSTLLNALM------DKPQLTSSRY-------PGTTLDFNPLD--IHGVTV 202
Query: 336 YDTPGVHLHHRQAAVVH--AEDLPALAPQS-------RLRG-QSFAVISETETNNEFKSH 385
YDTPG L R + ++H EDL + P +LRG QSFAV
Sbjct: 203 YDTPG--LTPRNSMLLHLDEEDLKTVLPAKAVKPVGFQLRGDQSFAV------------- 247
Query: 386 GLNGFTIFWGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTP-P 444
GGL RIDLL FY L+++ DKADE + + G L P P
Sbjct: 248 ---------GGLCRIDLLGC-EHVSAVFYCSNLLELHRGRADKADELWDRHYGELLRPIP 297
Query: 445 IGKQKAEGWKGLDRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIR 494
G AE W L + ++ DV I G+GW+S+ IR
Sbjct: 298 AGMPYAE-WTS---TVLTPLGVKE------DVVIPGVGWMSLSGTCGQIR 337
>gi|373497682|ref|ZP_09588204.1| ribosome biogenesis GTPase YqeH [Fusobacterium sp. 12_1B]
gi|371962822|gb|EHO80399.1| ribosome biogenesis GTPase YqeH [Fusobacterium sp. 12_1B]
Length = 370
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 102/425 (24%), Positives = 174/425 (40%), Gaps = 68/425 (16%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRC-RLLSHGHMITAVGGNGGY 159
C GCG LQ+ +++ GY+ + H+ C RC ++ ++G +
Sbjct: 5 CVGCGIELQSEDANKSGYLPEGKLQENGDHY------CQRCFKIKNYGKYMPV------- 51
Query: 160 AGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVD 219
++ D+ R+++ + L V + DI+DF GSF I D+ I+V+ K+D
Sbjct: 52 -----RLNKDDYRKEVQEAMQYSKLAVAVFDIIDFEGSFDDEILDVLREMDSIVVINKLD 106
Query: 220 LLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQK-EKKGRDVYIL 278
L+P + V DWV + ++ + L + + SSK+ GI G+ +I+ G + +L
Sbjct: 107 LIPDDKHPSEVSDWVKDRLAEEGIAPLDIAIVSSKNGYGINGIFKKIKHFYPDGVEAIVL 166
Query: 279 GSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDT 338
G NVGKS+ +N LL KY PGTTL ++ L DT
Sbjct: 167 GVTNVGKSSIVNRLL------GAKKVTVSKY-------PGTTLKSVKNQIPHTNIVLVDT 213
Query: 339 PGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLV 398
PG+ R + +V E + P + ++F V K L + W ++
Sbjct: 214 PGLIPEGRISNLVCEECNLKMVPSGEISRKTFKV---------KKGRALLIGELLWFRVL 264
Query: 399 RIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDR 458
D +P + Y K + + T++ E L PP + +
Sbjct: 265 NED--DTMP--IFSLYAAKDVTFHETNTERLKELLASGRKDLLYPPCDNCRDQ------Y 314
Query: 459 ERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVE 518
++L IK + + ++ GLGWISV+ G L + V +PK
Sbjct: 315 KKLEMIKKKIKVQAGEELVFKGLGWISVK----------------RGPLEIEVTLPKEAG 358
Query: 519 VFVRN 523
+ VR+
Sbjct: 359 IIVRD 363
>gi|125605432|gb|EAZ44468.1| hypothetical protein OsJ_29085 [Oryza sativa Japonica Group]
Length = 596
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 99/385 (25%), Positives = 172/385 (44%), Gaps = 51/385 (13%)
Query: 127 KKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYAGGKQFVSADELREKLSHLRREKALIV 186
K+ + K V+C RC L H ++ FV+A + +L+ ++L++
Sbjct: 152 KEGKKENKVVVCARCHSLRHYGVVKRPEAEP-LLPDFDFVAA--VGPRLASPSGARSLVL 208
Query: 187 KLVDIVDFNGSFL------------ARIRDLAGANPI-----ILVVTKVDLLPKGT---- 225
L D DF+GSF A D P +LVVTK+DLLP +
Sbjct: 209 LLADASDFDGSFPRAVARLVAAAGEAHGSDWKHGAPANLPRALLVVTKLDLLPTPSLSPD 268
Query: 226 DFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGR-DVYILGSANVG 284
D + A L + VHL S+ G+ + +++ R +V+ +G+ NVG
Sbjct: 269 DVHAWAHSRARAGAGGDLRLAGVHLVSAARGWGVRDLLDHVRQLAGSRGNVWAVGARNVG 328
Query: 285 KSAFINALLKKMG-ERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGG-GKLYDTPGVH 342
KS +NA+ + G E P ++ VPGTTL IQ+D LG KL+DTPG+
Sbjct: 329 KSTLLNAIARCSGIEGGPTL--------TEAPVPGTTLDVIQVDGVLGSQAKLFDTPGLL 380
Query: 343 LHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRIDL 402
H+ + + E+ + +R +++ + G ++ GGLVR+D+
Sbjct: 381 HGHQLTSRLTREEQKLVRVSKEMRPRTYRLKP--------------GQSVHIGGLVRLDI 426
Query: 403 LKV-LPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRERL 461
++ + +T + + ++M T+ A + G+ L PPIG+Q+ R++
Sbjct: 427 EELTVGSVYVTVWASPLVPLHMGKTENAAAMVKDHFGLQLQPPIGQQRVNELGKWVRKQ- 485
Query: 462 LEIKFEDTERPASDVAISGLGWISV 486
++ + + D+AI+GLGW +
Sbjct: 486 FKVSGNSWDVNSKDIAIAGLGWFGI 510
>gi|195150909|ref|XP_002016392.1| GL11551 [Drosophila persimilis]
gi|194110239|gb|EDW32282.1| GL11551 [Drosophila persimilis]
Length = 623
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 117/245 (47%), Gaps = 24/245 (9%)
Query: 94 VNSAVASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAV 153
+ ++ C GCGA L S PGY+ + + + + KT++C RC L+H ++ V
Sbjct: 102 IPASTVPCSGCGAHLHCSNISMPGYIPSEIFN-GRSQQELKTIICQRCHFLNHYNIALDV 160
Query: 154 GGNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGA-NPII 212
V + +S ++ AL + +VD++DF S ++ + G P+
Sbjct: 161 D-----------VPPSSYVDTISRIQDHFALAIVMVDLLDFPSSIWPGMQHVLGTKRPVF 209
Query: 213 LVVTKVDLLPKGTDF------NCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEI 266
LV KVDLLP+ ++ +C+ ++ LN+ +V L S+K+ GI + +++
Sbjct: 210 LVGNKVDLLPRDSNSYLNHVKHCLQRSFIQHGGGDGLNIKNVSLISAKTGYGIEELITQL 269
Query: 267 QK--EKKGRDVYILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPI 324
K KG DVY+LG NVGKS N LL R A+ + +K PGTTL +
Sbjct: 270 HKTWSYKG-DVYLLGCTNVGKSTLFNILLNSDYCRPEASELVRK--ATTCPWPGTTLELL 326
Query: 325 QIDAF 329
+ F
Sbjct: 327 RFPIF 331
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 85/207 (41%), Gaps = 47/207 (22%)
Query: 335 LYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFW 394
+YDTPGV + A++ AE+L L P + +R ++F + + T+
Sbjct: 417 VYDTPGVMQPDQLTALLTAEELAQLQPTTMIRPRAFRLRPK--------------MTLLL 462
Query: 395 GGLVRIDLL------KVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQ 448
GL R+D+L K + + ++L V + T +A+ Y++ LG TP +G
Sbjct: 463 AGLARMDILDLSGSEKHYDWLKVFVFASQNLPVMIADTLQAETVYKRYLG---TPFLGIP 519
Query: 449 KAEG--------WKGL---DRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSD 497
A G W GL +++ ++ R D+ +S GW+ +
Sbjct: 520 SASGDLEARLKRWPGLHCKEKDIVVSKSGRHEGRLNCDITLSSAGWLGL----------- 568
Query: 498 INLESTSGELHLAVHVPKPVEVFVRNP 524
L + E L V P ++VR P
Sbjct: 569 --LLPDNSECSLRVWTPHAAGIYVRTP 593
>gi|217077039|ref|YP_002334755.1| GTP-binding protein [Thermosipho africanus TCF52B]
gi|217036892|gb|ACJ75414.1| GTP-binding protein [Thermosipho africanus TCF52B]
Length = 358
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 93/391 (23%), Positives = 168/391 (42%), Gaps = 68/391 (17%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRC-RLLSHGHMITAVGGNGGY 159
C GCGA LQ ++ PGY+ + E + LC RC R++ +G + V
Sbjct: 3 CRGCGAELQYTDPKKPGYIPKEILENEPDP------LCQRCYRIIHYGKLTVPV------ 50
Query: 160 AGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVD 219
++ + ++ + + + EK L V +DI DF G++ + I + + +TK D
Sbjct: 51 ---QEEIFLHQIDKVIKNF--EKVLYV--IDITDFEGTYRSEIMEKLQGKDVYFAITKFD 103
Query: 220 LLPKGTDFNCVGDWVVEATTKKKLNVLS--VHLTSSKSLAGIVGVASEIQKEKKGRDVYI 277
LLP+ +W+ KK+LN S + LTSSK+ G+ + + KK D+ I
Sbjct: 104 LLPRSLSSIEAQEWL-----KKRLNTTSEKIFLTSSKNGFGLKKLEKFFKDSKK--DILI 156
Query: 278 LGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYD 337
+G NVGKS+ ++A K+ P S PGTTLG ++ F +YD
Sbjct: 157 VGVTNVGKSSLLSAFTKE--------------HPTISPFPGTTLGIVKRKVF--NTYIYD 200
Query: 338 TPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGL 397
TPG+ + R ++ E + + L ++F + I
Sbjct: 201 TPGILTNDRVIDLLSPECQAKILKTNNLTRKTFKIDQSR--------------AILVSAF 246
Query: 398 VRIDL-LKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGL 456
+I++ + + P+ + + +++AD+ + G L PP K +
Sbjct: 247 CKIEVEFDGDKKPIFQIFAPEKVTFHETKSERADQLIHQRAGDLLQPPCKKTDMSKY-NF 305
Query: 457 DRERLLEIKFEDTERPASDVAISGLGWISVE 487
ER+L + +++I+GL +I+++
Sbjct: 306 KTERILVDQ-------KQEISINGLCFINIK 329
>gi|125808464|ref|XP_001360762.1| GA10638 [Drosophila pseudoobscura pseudoobscura]
gi|54635934|gb|EAL25337.1| GA10638 [Drosophila pseudoobscura pseudoobscura]
Length = 623
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 117/245 (47%), Gaps = 24/245 (9%)
Query: 94 VNSAVASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAV 153
+ ++ C GCGA L S PGY+ + + + + KT++C RC L+H ++ V
Sbjct: 102 IPASTVPCSGCGAHLHCSNISMPGYIPSEIFN-GRSQQELKTIICQRCHFLNHYNIALDV 160
Query: 154 GGNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGA-NPII 212
V + +S ++ AL + +VD++DF S ++ + G P+
Sbjct: 161 D-----------VPPSSYVDTISRIQDHFALAIVMVDLLDFPSSIWPGMQHVLGTKRPVF 209
Query: 213 LVVTKVDLLPKGTDF------NCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEI 266
LV KVDLLP+ ++ +C+ ++ LN+ +V L S+K+ GI + +++
Sbjct: 210 LVGNKVDLLPRDSNSYLNHVKHCLQRSFIQHGGGDGLNIKNVSLISAKTGYGIEELITQL 269
Query: 267 QK--EKKGRDVYILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPI 324
K KG DVY+LG NVGKS N LL R A+ + +K PGTTL +
Sbjct: 270 HKTWSYKG-DVYLLGCTNVGKSTLFNILLNSDYCRPEASELVRK--ATTCPWPGTTLELL 326
Query: 325 QIDAF 329
+ F
Sbjct: 327 RFPIF 331
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 85/207 (41%), Gaps = 47/207 (22%)
Query: 335 LYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFW 394
+YDTPGV + A++ AE+L L P + +R ++F + + T+
Sbjct: 417 VYDTPGVMQPDQLTALLTAEELAQLQPTTMIRPRAFRLRPK--------------MTLLL 462
Query: 395 GGLVRIDLL------KVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQ 448
GL R+D+L K + + ++L V + T +A+ Y++ LG TP +G
Sbjct: 463 AGLARMDILDLSGSEKHYDWLKVFVFASQNLPVMIADTLQAETVYKRYLG---TPFLGIP 519
Query: 449 KAEG--------WKGL---DRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSD 497
A G W GL D++ ++ R D+ +S GW+ +
Sbjct: 520 SASGDLEARLKRWPGLHCKDKDIVVSKSGRHEGRLNCDITLSSAGWLGL----------- 568
Query: 498 INLESTSGELHLAVHVPKPVEVFVRNP 524
L + E L V P ++VR P
Sbjct: 569 --LLPDNSECSLRVWTPHAAGIYVRTP 593
>gi|50725922|dbj|BAD33450.1| GTP-binding protein-like [Oryza sativa Japonica Group]
gi|50726207|dbj|BAD33726.1| GTP-binding protein-like [Oryza sativa Japonica Group]
gi|215769235|dbj|BAH01464.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218202025|gb|EEC84452.1| hypothetical protein OsI_31074 [Oryza sativa Indica Group]
Length = 604
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 113/465 (24%), Positives = 190/465 (40%), Gaps = 100/465 (21%)
Query: 96 SAVASCYGCGAPLQTSESDAPGYVD------PD---------------TYELKKKH---- 130
SA C GCG +Q+S+ PG+ PD + LK H
Sbjct: 80 SANGLCPGCGIAMQSSDPSLPGFFSLPSPKSPDYRARLAPVTADDTRISASLKSGHLREG 139
Query: 131 ------------------------HQFKTVLCGRCRLLSHGHMITAVGGNGGYAGGKQFV 166
+ K V+C RC L H ++ FV
Sbjct: 140 EAAAAASSSSAAVGVGVEVEKEGKKENKVVVCARCHSLRHYGVVKRPEAEP-LLPDFDFV 198
Query: 167 SADELREKLSHLRREKALIVKLVDIVDFNGSFL------------ARIRDLAGANPI--- 211
+A + +L+ ++L++ L D DF+GSF A D P
Sbjct: 199 AA--VGPRLASPSGARSLVLLLADASDFDGSFPRAVARLVAAAGEAHGSDWKHGAPANLP 256
Query: 212 --ILVVTKVDLLPKGT----DFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASE 265
+LVVTK+DLLP + D + A L + VHL S+ G+ +
Sbjct: 257 RALLVVTKLDLLPTPSLSPDDVHAWAHSRARAGAGGDLRLAGVHLVSAARGWGVRDLLDH 316
Query: 266 IQKEKKGR-DVYILGSANVGKSAFINALLKKMG-ERDPAAAMAQKYRPIQSAVPGTTLGP 323
+++ R +V+ +G+ NVGKS +NA+ + G E P ++ VPGTTL
Sbjct: 317 VRQLAGSRGNVWAVGARNVGKSTLLNAIARCSGIEGGPTLT--------EAPVPGTTLDV 368
Query: 324 IQIDAFLGG-GKLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEF 382
IQ+D LG KL+DTPG+ H+ + + E+ + +R +++ +
Sbjct: 369 IQVDGVLGSQAKLFDTPGLLHGHQLTSRLTREEQKLVRVSKEMRPRTYRLKP-------- 420
Query: 383 KSHGLNGFTIFWGGLVRIDLLKV-LPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTL 441
G ++ GGLVR+D+ ++ + +T + + ++M T+ A + G+ L
Sbjct: 421 ------GQSVHIGGLVRLDIEELTVGSVYVTVWASPLVPLHMGKTENAAAMVKDHFGLQL 474
Query: 442 TPPIGKQKAEGWKGLDRERLLEIKFEDTERPASDVAISGLGWISV 486
PPIG+Q+ R++ ++ + + D+AI+GLGW +
Sbjct: 475 QPPIGQQRVNELGKWVRKQ-FKVSGNSWDVNSKDIAIAGLGWFGI 518
>gi|419759618|ref|ZP_14285909.1| GTP-binding protein [Thermosipho africanus H17ap60334]
gi|407515351|gb|EKF50117.1| GTP-binding protein [Thermosipho africanus H17ap60334]
Length = 358
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 93/391 (23%), Positives = 168/391 (42%), Gaps = 68/391 (17%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRC-RLLSHGHMITAVGGNGGY 159
C GCGA LQ ++ PGY+ + E + LC RC R++ +G + V
Sbjct: 3 CRGCGAELQYTDPTKPGYIPKEILENEPDP------LCQRCYRIIHYGKLTVPV------ 50
Query: 160 AGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVD 219
++ + ++ + + + EK L V +DI DF G++ + I + + +TK D
Sbjct: 51 ---QEEIFLHQIDKVIKNF--EKVLYV--IDITDFEGTYRSEIMEKLQGKDVYFAITKFD 103
Query: 220 LLPKGTDFNCVGDWVVEATTKKKLNVLS--VHLTSSKSLAGIVGVASEIQKEKKGRDVYI 277
LLP+ +W+ KK+LN S + LTSSK+ G+ + + KK D+ I
Sbjct: 104 LLPRSLSSIEAQEWL-----KKRLNATSEKIFLTSSKNGFGLKKLEKFFKDSKK--DILI 156
Query: 278 LGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYD 337
+G NVGKS+ ++A K+ P S PGTTLG ++ F +YD
Sbjct: 157 VGVTNVGKSSLLSAFTKE--------------HPTISPFPGTTLGIVKRKVF--NTYIYD 200
Query: 338 TPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGL 397
TPG+ + R ++ E + + L ++F + I
Sbjct: 201 TPGILTNDRVIDLLSPECQAKILKTNNLTRKTFKIDQSR--------------AILVSAF 246
Query: 398 VRIDL-LKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGL 456
+I++ + + P+ + + +++AD+ + G L PP K +
Sbjct: 247 CKIEVEFDGDKKPIFQIFAPEKVTFHETKSERADQLIHQRAGDLLQPPCKKTDMSKY-NF 305
Query: 457 DRERLLEIKFEDTERPASDVAISGLGWISVE 487
ER+L + +++I+GL +I+++
Sbjct: 306 KTERILVDQ-------KQEISINGLCFINIK 329
>gi|262067703|ref|ZP_06027315.1| ribosome biogenesis GTPase YqeH [Fusobacterium periodonticum ATCC
33693]
gi|291378428|gb|EFE85946.1| ribosome biogenesis GTPase YqeH [Fusobacterium periodonticum ATCC
33693]
Length = 366
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 106/427 (24%), Positives = 181/427 (42%), Gaps = 78/427 (18%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG LQ ++ D GY P + + K+ + C RC L H G Y+
Sbjct: 5 CVGCGIELQNTDKDLQGYT-PKSIDNKEDMY------CQRCFQLKH---------YGKYS 48
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
K ++ ++ ++++ L + L++ + DI+DF GSF I D+ I+VV K+DL
Sbjct: 49 TNK--MTREDYKKEVGKLLDDVKLVIAVFDIIDFEGSFDVEILDILREKDSIVVVNKLDL 106
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQK-EKKGRDVYILG 279
+P + V +WV + ++ + L + + S+K+ G+ G+ +I+ G + ++G
Sbjct: 107 IPDEKHPSEVANWVKDRLAEESIAPLDIAIVSTKNGYGVNGIFKKIKHFYPDGVNAMVIG 166
Query: 280 SANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTL-GPIQIDAFLGGGKLYDT 338
NVGKS+ IN LL G+R A KY PGTT+ + + F G LYDT
Sbjct: 167 VTNVGKSSVINRLL---GKR---IATVSKY-------PGTTIKNTLNMIPFTNIG-LYDT 212
Query: 339 PGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLV 398
PG+ R + ++ + P + ++F + I LV
Sbjct: 213 PGLIPKGRASDLLCDSCAQKIIPAGEISRKTFKAKYDR--------------VIMIDNLV 258
Query: 399 RIDLL---KVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKG 455
+I +L +V P Y K ++ + ++A E E G P + E K
Sbjct: 259 KIRILNDEEVKP--IFAIYAAKDVKFHETTIERAKEL---EEGNFFEIPCECCRDEYNKH 313
Query: 456 LDRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPK 515
+ L IK ++ GL W+SV+ G L + V + +
Sbjct: 314 KKISKTLTIK------TGEELVFKGLAWVSVK----------------RGPLKIEVTLAE 351
Query: 516 PVEVFVR 522
+E+ +R
Sbjct: 352 EIEISIR 358
>gi|195381701|ref|XP_002049584.1| GJ21673 [Drosophila virilis]
gi|194144381|gb|EDW60777.1| GJ21673 [Drosophila virilis]
Length = 647
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/237 (30%), Positives = 116/237 (48%), Gaps = 24/237 (10%)
Query: 94 VNSAVASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAV 153
V + C GCGA L S PGY+ + ++ + + +T+ C RC L H ++ V
Sbjct: 128 VQPSTVPCNGCGAHLHCVSSSLPGYIPSEIFK-GRTISELQTITCQRCHFLEHYNIALDV 186
Query: 154 GGNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGA-NPII 212
V E +S ++ + AL V +VD++D S ++ + G+ P+
Sbjct: 187 E-----------VPPSAYVETISRIQDKYALAVIIVDLLDLPSSIWPGMQQILGSKRPVF 235
Query: 213 LVVTKVDLLPKGTDF------NCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEI 266
LV KVDLLP+ ++ +C+ V+ LN+ ++ L S+K+ GI + +++
Sbjct: 236 LVGNKVDLLPRDSNSYLTHVKSCLKQQFVQYGGFDALNIKNISLISAKTGYGIEELITQL 295
Query: 267 QK--EKKGRDVYILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTL 321
K + KG DVY+LG NVGKS+ N LL R A+ + +K A PGTTL
Sbjct: 296 HKIWQYKG-DVYLLGCTNVGKSSLFNILLNSDYCRPEASELVRK--ATTCAWPGTTL 349
Score = 38.9 bits (89), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 88/211 (41%), Gaps = 45/211 (21%)
Query: 335 LYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFW 394
+YDTPGV + ++ E+L L P LR ++F + ++
Sbjct: 443 VYDTPGVMQPDQLTPLLTTEELLRLQPTKMLRPRAFRLAPT--------------MSLLL 488
Query: 395 GGLVRIDLLKVLPETCLTF-YGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEG- 452
GGL R+DLL+ E F + ++L + + T +A+ Y + LG TP +G A G
Sbjct: 489 GGLARVDLLECNQEYLKLFVFAAETLPILITDTQQAEMVYARYLG---TPLLGVPMAGGD 545
Query: 453 ------WKGL---DRERLLE----IKFEDTERPASDVAISGLGWISVEPVRRSIRNSDIN 499
W GL +++ +++ + + + D+ +S GW+ +
Sbjct: 546 ETRLQRWPGLQCMEKDIVVQSGALLNRQAERQLNCDITLSSAGWLGL------------- 592
Query: 500 LESTSGELHLAVHVPKPVEVFVRNPMPVGKA 530
L + E V P+ ++VR P + +A
Sbjct: 593 LLPENSECTWRVWTPQATGIYVRKPALIPQA 623
>gi|343525560|ref|ZP_08762515.1| ferrous iron transport protein B-like protein [Streptococcus
constellatus subsp. pharyngis SK1060 = CCUG 46377]
gi|343395830|gb|EGV08368.1| ferrous iron transport protein B-like protein [Streptococcus
constellatus subsp. pharyngis SK1060 = CCUG 46377]
Length = 197
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 113/216 (52%), Gaps = 26/216 (12%)
Query: 234 VVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGSANVGKSAFINALL 293
+ E ++ L + V LTS+++ I + +I++ +KGRDVY++G NVGKS INA++
Sbjct: 1 MTERAHEEGLRPVDVVLTSAQNKQAIKELIEKIEQYRKGRDVYVVGVTNVGKSTLINAII 60
Query: 294 KKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPGVHLHHRQAAVVH 352
+++ G++D S PGTTL I+I + G +YDTPG+ H+ A +
Sbjct: 61 QEITGDKDIITT---------SRFPGTTLDKIEI-PLVDGSHIYDTPGIIHRHQMAHYLS 110
Query: 353 AEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRIDLLKVLPETCLT 412
A++L ++P+ ++ +++ + E T+F GGL R D + + T
Sbjct: 111 AKNLKYVSPKKEIKPKTYQLNPEQ--------------TLFLGGLGRFDFVSG-NKQGFT 155
Query: 413 FYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQ 448
Y LQ++ A EFY+K +G LTPP K+
Sbjct: 156 AYFDNELQLHRTKLAGAGEFYEKHVGSLLTPPSKKK 191
>gi|315917028|ref|ZP_07913268.1| GTP-binding protein [Fusobacterium gonidiaformans ATCC 25563]
gi|313690903|gb|EFS27738.1| GTP-binding protein [Fusobacterium gonidiaformans ATCC 25563]
Length = 362
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 125/273 (45%), Gaps = 32/273 (11%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG PLQ ++S GY D + + + C RC +SH G ++
Sbjct: 5 CIGCGIPLQNTDSKKDGYTPKDI-------NGKEELYCQRCFRVSH---------YGEHS 48
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
F+S ++ +++L K L + + DI+DF GSF I D+ I+V+ KVDL
Sbjct: 49 SS--FLSREDYQKELQQWVSPKRLALAVFDIIDFEGSFQDDILDILREMDSIVVINKVDL 106
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQK-EKKGRDVYILG 279
+P + V +WV + ++ L + + S K+ G+ GV +IQ G +V +LG
Sbjct: 107 IPGEKHPSEVANWVKGRLASEGISPLDIAIVSCKNNYGMNGVLRKIQHFYPNGVEVLVLG 166
Query: 280 SANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS+ IN LL K R S PGTTL + L DTP
Sbjct: 167 VTNVGKSSVINRLLG-------------KNRVTVSKYPGTTLLSTMNEILGTKLCLIDTP 213
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAV 372
G+ R + ++ ED + P + + ++F +
Sbjct: 214 GLIPEGRFSDLMIEEDQLRVIPSTEISRKTFKL 246
>gi|221486976|gb|EEE25222.1| conserved hypothetical protein [Toxoplasma gondii GT1]
Length = 722
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 140/305 (45%), Gaps = 55/305 (18%)
Query: 134 KTVLCGRCRLLSHGHMITAVGGNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVD 193
K +LC RC + G I G G++ G + D + + LR ++ + + +D++
Sbjct: 380 KPILCQRCHAMRSGKKIDE-GLRVGFSHGDDLLHPDRFKRLVGSLRTKRCIFLLFLDLI- 437
Query: 194 FNGSFLARIRDLAGANPIILVVTKVDLLPKG--------------------TDFNCVGDW 233
+ + + DL NP+ + VTK DLLP T+ N +
Sbjct: 438 -SPELIPALPDLVRVNPLYVAVTKCDLLPGSLRRPDAPFNSRAEGFRRRCITNTNVARHY 496
Query: 234 VVEATTK----KKLNVLSVHLTSSKSLAGIVGVASEIQKE--KKGRDVYILGSANVGKSA 287
V E ++ K V ++ + S+KS AG+ + + + KE ++ R VY++G+AN GKS+
Sbjct: 497 VFEMLSRAYKLKDFTVKNIFMISNKSGAGLTHLINAVGKEAIRRKRPVYVIGAANAGKSS 556
Query: 288 FINALLKKMGERDPAAAMAQKYRP----------IQSAVPGTTLGPIQIDAFLGGGKLYD 337
F+N +L K RD AA +P SAVPGTTL I I G K+ D
Sbjct: 557 FLNKILAK-ATRDTDAASGPLQKPQLKGAKAAAAAASAVPGTTLDFIPI-VVNGKWKVID 614
Query: 338 TPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGL 397
TPGV L A ++ E+L A P S L S A ++E G ++ GGL
Sbjct: 615 TPGVFLKGSYANLLTQEELQAAVPSSALHLCS-ARVAE-------------GQGVWLGGL 660
Query: 398 VRIDL 402
R++L
Sbjct: 661 ARVEL 665
>gi|317058880|ref|ZP_07923365.1| GTP-binding protein [Fusobacterium sp. 3_1_5R]
gi|313684556|gb|EFS21391.1| GTP-binding protein [Fusobacterium sp. 3_1_5R]
Length = 362
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 125/273 (45%), Gaps = 32/273 (11%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG PLQ ++S GY D + + + C RC +SH G ++
Sbjct: 5 CIGCGIPLQNTDSKKDGYTPKDI-------NGKEELYCQRCFRVSH---------YGEHS 48
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
F+S ++ +++L K L + + DI+DF GSF I D+ I+V+ KVDL
Sbjct: 49 SS--FLSREDYQKELQQWVSPKRLALAVFDIIDFEGSFQDDILDILREMDSIVVINKVDL 106
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQK-EKKGRDVYILG 279
+P + V +WV + ++ L + + S K+ G+ GV +IQ G +V +LG
Sbjct: 107 IPGEKHPSEVANWVKGRLASEGISPLDIAIVSCKNNYGMNGVLRKIQHFYPNGVEVLVLG 166
Query: 280 SANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS+ IN LL K R S PGTTL + L DTP
Sbjct: 167 VTNVGKSSVINRLLG-------------KNRVTVSKYPGTTLLSTMNEISGTNLCLIDTP 213
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAV 372
G+ R + ++ ED + P + + ++F +
Sbjct: 214 GLIPEGRFSDLMIEEDQLRVIPSTEISRKTFKL 246
>gi|194753380|ref|XP_001958990.1| GF12654 [Drosophila ananassae]
gi|190620288|gb|EDV35812.1| GF12654 [Drosophila ananassae]
Length = 566
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 114/229 (49%), Gaps = 22/229 (9%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA L S + PGY+ + + + + + T+ C RC L + ++ V
Sbjct: 52 CNGCGAHLHCSRASLPGYIPSEIFRGRTRA-ELHTITCQRCHFLHNYNIALDVE------ 104
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGA-NPIILVVTKVD 219
V+ E +S ++ + AL + +VD++DF S ++++ G PI LV KVD
Sbjct: 105 -----VTPASYVETISQIQDKYALAIVIVDLLDFPSSIWPGMQNVLGTKRPIFLVGNKVD 159
Query: 220 LLPKGTDF------NCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGR 273
LLP+ ++ C+ + V +LN+ +V L S+K+ GI + +++QK +
Sbjct: 160 LLPRDSNIYLQHVKECLRNEFVRYGGGNELNIKNVSLISAKTGYGIEELITQLQKTWAYK 219
Query: 274 -DVYILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTL 321
DVY+LG NVGKS+ N LL R A+ + ++ PGTTL
Sbjct: 220 GDVYLLGCTNVGKSSLFNILLNSDYCRPEASDLVRQ--ATTCPWPGTTL 266
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 85/207 (41%), Gaps = 47/207 (22%)
Query: 335 LYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFW 394
+YDTPGV + ++ AE+L L P +R ++F + + +IF
Sbjct: 360 VYDTPGVMHPDQLTPLLTAEELVQLQPTKMIRPRAFRLRPQ--------------MSIFL 405
Query: 395 GGLVRIDLLKV------LPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQ 448
GGL R+DLL++ + + + L V + T +AD Y++ LG TP +G
Sbjct: 406 GGLARMDLLELRSYKNQFDWIKVFVFASEHLPVLISDTQEADNIYKRYLG---TPYLGVP 462
Query: 449 KAEG--------WKGL---DRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSD 497
A G W GL + E ++E K R D+ +S GW+ +
Sbjct: 463 TAGGDLEARLHRWPGLQAKEDEIVVESKGRSEGRLNCDITLSSAGWMGL----------- 511
Query: 498 INLESTSGELHLAVHVPKPVEVFVRNP 524
L E L V P ++ R+P
Sbjct: 512 --LLPGHSECRLRVWTPNSTGIYKRDP 536
>gi|293335703|ref|NP_001168377.1| uncharacterized protein LOC100382146 [Zea mays]
gi|223947863|gb|ACN28015.1| unknown [Zea mays]
gi|414885176|tpg|DAA61190.1| TPA: hypothetical protein ZEAMMB73_567116 [Zea mays]
Length = 585
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 93/377 (24%), Positives = 174/377 (46%), Gaps = 49/377 (12%)
Query: 134 KTVLCGRCRLLSHGHMITAVGGNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVD 193
K ++C RC L H + FV+A + +L+ ++L++ L D D
Sbjct: 160 KVLVCARCHSLRHYGRVKHPDAER-LLPDFDFVAA--VGPRLASPSGARSLVLLLADASD 216
Query: 194 FNGSF---------------LARIRDLAGAN--PIILVVTKVDLLPKGT----DFNCVGD 232
F+GSF A + A AN +LVVTK+DLLP + D +
Sbjct: 217 FDGSFPRAVARLVAAAGEAHRADWKHGAPANLPRALLVVTKLDLLPTPSLSPDDVHAWAH 276
Query: 233 WVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGR-DVYILGSANVGKSAFINA 291
A L + VHL S+ G+ + +++ R +V+ +G+ NVGKS +NA
Sbjct: 277 SRARAGAGADLRLAGVHLVSATRGWGVRDLLEHVRELAGTRGNVWAVGARNVGKSTLLNA 336
Query: 292 LLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGG-GKLYDTPGVHLHHRQAAV 350
+ + G + + ++ VPGTTL I++D LG KL+DTPG+ H+ +
Sbjct: 337 IARCCG-------IVGRPTLTEAPVPGTTLDVIKLDGVLGAQAKLFDTPGLLHGHQLTSR 389
Query: 351 VHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRIDLLKV-LPET 409
+ +E++ + + + +++ + +E +I GGLVR+D+ ++ +
Sbjct: 390 LTSEEMKLVQVRKEMSPRTYRIKTE--------------HSIHIGGLVRLDVEELTVGSI 435
Query: 410 CLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRERLLEIKFEDT 469
+T + + ++M T+ ++ G+ L PPIG+++ + R++ ++
Sbjct: 436 YVTVWASPLVPLHMGKTENTTTLIKEHFGLQLQPPIGQERVKELGKWVRKQ-FKVSGNSW 494
Query: 470 ERPASDVAISGLGWISV 486
+ + D+AI+GLGW +
Sbjct: 495 DTNSKDIAIAGLGWFGI 511
>gi|348670681|gb|EGZ10502.1| hypothetical protein PHYSODRAFT_518854 [Phytophthora sojae]
Length = 513
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 101/201 (50%), Gaps = 12/201 (5%)
Query: 100 SCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGY 159
+C GCG LQ E GY + K + C RC ++ I+
Sbjct: 5 TCSGCGIELQYEEPKQVGYFPKQLLSNVHDLKELKRLRCERCFQMTQYGKISDTK----- 59
Query: 160 AGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVD 219
+ E +++ LR + L+++LVDI+D +GS L + R + G P++LVV K D
Sbjct: 60 ------MPYQEYEKRVMELRSKDMLMIQLVDILDISGSLLPKARHIFGKKPVMLVVNKGD 113
Query: 220 LLPKGTDFNCVGDWV-VEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYIL 278
L+P + + + EA N++S++L S+ G+ + ++ K ++GRD+ ++
Sbjct: 114 LVPTKSGIRRLMRRIKQEAKDAGIDNLISIYLISAMKRIGMKEIVEDVAKYREGRDICVV 173
Query: 279 GSANVGKSAFINALLKKMGER 299
G+ANVGKS F+N+ L + +R
Sbjct: 174 GAANVGKSTFLNSFLSHLVDR 194
>gi|358466528|ref|ZP_09176342.1| hypothetical protein HMPREF9093_00813 [Fusobacterium sp. oral taxon
370 str. F0437]
gi|357068959|gb|EHI78923.1| hypothetical protein HMPREF9093_00813 [Fusobacterium sp. oral taxon
370 str. F0437]
Length = 366
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 106/427 (24%), Positives = 180/427 (42%), Gaps = 78/427 (18%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG LQ + D GY P + + K+ + C RC L H G Y+
Sbjct: 5 CVGCGIELQNIDKDLQGYT-PKSIDSKEDMY------CQRCFQLKH---------YGKYS 48
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
K ++ ++ ++++ L + L++ + DI+DF GSF I D+ I+VV K+DL
Sbjct: 49 TNK--MTREDYKKEVGKLLDDVKLVIAVFDIIDFEGSFDVEILDILREKDSIVVVNKLDL 106
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQK-EKKGRDVYILG 279
+P + V +WV + ++ + L + + S+K+ G+ G+ +I+ G + ++G
Sbjct: 107 IPDEKHPSEVANWVKDRLAEESIAPLDIAIVSTKNGYGVNGIFKKIKHFYPDGVNAMVIG 166
Query: 280 SANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTL-GPIQIDAFLGGGKLYDT 338
NVGKS+ IN LL G+R A KY PGTT+ + + F G LYDT
Sbjct: 167 VTNVGKSSVINRLL---GKR---IATVSKY-------PGTTIKNTLNMIPFTNIG-LYDT 212
Query: 339 PGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLV 398
PG+ R + ++ + P + ++F + I LV
Sbjct: 213 PGLIPEGRASDLLCDNCAQKIIPAGEISRKTFKAKYDR--------------VIMIDNLV 258
Query: 399 RIDLL---KVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKG 455
+I +L +V P Y K ++ + ++A E E G P + E K
Sbjct: 259 KIRVLNDEEVKP--IFAIYAAKDVKFHETTIERAKEL---EEGNFFDIPCECCRDEYNKH 313
Query: 456 LDRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPK 515
+ L IK ++ GL W+SV+ G L + V + +
Sbjct: 314 KKISKTLTIK------TGEELVFKGLAWVSVK----------------RGPLKIEVTLAE 351
Query: 516 PVEVFVR 522
+E+ +R
Sbjct: 352 EIEISIR 358
>gi|195429551|ref|XP_002062821.1| GK19491 [Drosophila willistoni]
gi|194158906|gb|EDW73807.1| GK19491 [Drosophila willistoni]
Length = 644
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/237 (29%), Positives = 114/237 (48%), Gaps = 24/237 (10%)
Query: 94 VNSAVASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAV 153
+ S+ C GCGA L S PGY+ + ++ + + +T++C RC L H ++ V
Sbjct: 120 IASSSVPCSGCGAHLHCHNSSYPGYIPSEIFK-GRTETELRTIVCKRCHFLKHYNLALDV 178
Query: 154 GGNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFL-ARIRDLAGANPII 212
V + + +S ++ + AL + LVD++DF S +R L P+
Sbjct: 179 E-----------VPSSSYVDTISRIQDKFALAIVLVDLLDFPSSIWPGMLRVLGSKRPVF 227
Query: 213 LVVTKVDLLPKGTDF------NCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEI 266
LV KVDLLP+ ++ +C+ ++ + +N+ V L S+K+ GI + +++
Sbjct: 228 LVGNKVDLLPRDSNSYMNHVRSCLTQEFIKHGGGQGMNIKHVSLISAKTGYGIEELITQL 287
Query: 267 QK--EKKGRDVYILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTL 321
K KG DVY+LG NVGKS N LL R A+ + K PGTTL
Sbjct: 288 HKIWAYKG-DVYLLGCTNVGKSTLFNILLNSDYCRPEASDLVAK--ATTCPWPGTTL 341
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 84/207 (40%), Gaps = 45/207 (21%)
Query: 335 LYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFW 394
+YDTPGV + ++ E+L L P+ +R ++F V ++
Sbjct: 436 VYDTPGVMQPDQLTPLLTTEELTLLQPKKMIRPRAFRVRP--------------NMSLML 481
Query: 395 GGLVRIDLLKVLPET------CLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTP-PIGK 447
GGL R DLL L + + + + L + +V T A+ YQ+ LG L PI
Sbjct: 482 GGLARFDLLDCLSDERQLEYLKVIVFASEELPLLIVDTAHAETVYQRYLGTELLGLPISG 541
Query: 448 QKA------EGWKGLDRERLLEIKFEDTERP----ASDVAISGLGWISVEPVRRSIRNSD 497
Q A + W GL + +I ++ER + D+ +S GWI +
Sbjct: 542 QDAGDAERIKRWPGLQCQD-TDIVITNSERNVGKLSCDITLSSAGWIGL----------- 589
Query: 498 INLESTSGELHLAVHVPKPVEVFVRNP 524
L ++ E L P V+VR P
Sbjct: 590 --LMPSNSECLLRAWTPLAAGVYVRKP 614
>gi|237831793|ref|XP_002365194.1| hypothetical protein, conserved [Toxoplasma gondii ME49]
gi|211962858|gb|EEA98053.1| hypothetical protein, conserved [Toxoplasma gondii ME49]
Length = 1036
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 112/491 (22%), Positives = 200/491 (40%), Gaps = 89/491 (18%)
Query: 88 KDKVLKVNSAVASCYGCGAPLQTSESDAPGYVD--------------------------P 121
+D +++ A C GCGA LQT + G+V P
Sbjct: 358 EDAFEEIHHAPRRCPGCGADLQTEDPARHGFVSAEKKDEWFSGRWKSLPKAKGVPVESVP 417
Query: 122 DTYEL-----KKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYAGGKQ-----FVSADEL 171
D E+ + + + +LC RC + M + G+ A Q +S + +
Sbjct: 418 DGVEVVTVKSPRFRKRTRLLLCRRCYRI---QMYKQLDGDWEAAANAQDQLLPSLSPEAV 474
Query: 172 REKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANP--IILVVTKVDLLPKGTDFNC 229
+ + ++ ++++K+VD+ D S + + + +I ++ +VD LP+
Sbjct: 475 VQSIVKTMKKDSVVLKIVDVCDLESSVVPELFQACRSKRLHVIWLINRVDCLPRTAQKRE 534
Query: 230 VGDWVVEATTK-KKLNVLSVHLTSSKSLAGIVGVASEIQKEK----------KGRDVYIL 278
V +WV + +++ L SS + G + ++ +GR +Y++
Sbjct: 535 VKEWVRRMVRQIDNVHIDDCILVSSATGHGFDELERRLELLLVPTPGGVCTVEGRRIYVV 594
Query: 279 GSANVGKSAFINALLKKMGERDPAAAMAQKYRP--IQSAVPGTTLGPIQIDAFLGGGKLY 336
G N GKS F+ LK + + ++ +SA+PGTTL + G KL
Sbjct: 595 GRVNAGKSTFVTRFLKFINYKHAGTIFMKRASGGVTRSALPGTTLSFLPF-GLPQGFKLI 653
Query: 337 DTPGVHLHHRQAAVV-HAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWG 395
DTPG+ H+ +++ A DL ++ P RL+ ++A+ G ++ G
Sbjct: 654 DTPGIPSRHQITSLLPFAADLYSIVPSKRLQPITYAIT--------------EGKSLLIG 699
Query: 396 GLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKG 455
L RIDL++ F+ K + +++ T KA + ++ L PP G+
Sbjct: 700 ALARIDLVQGSTALITCFFSHK-ITLHICKTVKAADLLSRKACTFLYPP---HLPAGFDK 755
Query: 456 LDRERLLEIKFEDTERPA-SDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVP 514
L +K A D++I+GLGWISV ++G L V VP
Sbjct: 756 LQPLVRHSVKVHAGNSLAYDDISIAGLGWISV--------------AGSAGPKELHVWVP 801
Query: 515 KPVEVFVRNPM 525
+ V+VF R M
Sbjct: 802 QGVKVFRRPAM 812
>gi|221506643|gb|EEE32260.1| conserved hypothetical protein [Toxoplasma gondii VEG]
Length = 1037
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 112/491 (22%), Positives = 200/491 (40%), Gaps = 89/491 (18%)
Query: 88 KDKVLKVNSAVASCYGCGAPLQTSESDAPGYVD--------------------------P 121
+D +++ A C GCGA LQT + G+V P
Sbjct: 359 EDAFEEIHHAPRRCPGCGADLQTEDPARHGFVSAEKKDEWFSGRWKSLPKAKGVPVESVP 418
Query: 122 DTYEL-----KKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYAGGKQ-----FVSADEL 171
D E+ + + + +LC RC + M + G+ A Q +S + +
Sbjct: 419 DGVEVVTVKSPRFRKRTRLLLCRRCYRI---QMYKQLDGDWEAAANAQDQLLPSLSPEAV 475
Query: 172 REKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANP--IILVVTKVDLLPKGTDFNC 229
+ + ++ ++++K+VD+ D S + + + +I ++ +VD LP+
Sbjct: 476 VQSIVKTMKKDSVVLKIVDVCDLESSVVPELFQACRSKRLHVIWLINRVDCLPRTAQKRE 535
Query: 230 VGDWVVEATTK-KKLNVLSVHLTSSKSLAGIVGVASEIQKEK----------KGRDVYIL 278
V +WV + +++ L SS + G + ++ +GR +Y++
Sbjct: 536 VKEWVRRMVRQIDNVHIDDCILVSSATGHGFDELERRLELLLVPTPGGVCTVEGRRIYVV 595
Query: 279 GSANVGKSAFINALLKKMGERDPAAAMAQKYRP--IQSAVPGTTLGPIQIDAFLGGGKLY 336
G N GKS F+ LK + + ++ +SA+PGTTL + G KL
Sbjct: 596 GRVNAGKSTFVTRFLKFINYKHAGTIFMKRASGGVTRSALPGTTLSFLPF-GLPQGFKLI 654
Query: 337 DTPGVHLHHRQAAVV-HAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWG 395
DTPG+ H+ +++ A DL ++ P RL+ ++A+ G ++ G
Sbjct: 655 DTPGIPSRHQITSLLPFAADLYSIVPSKRLQPITYAIT--------------EGKSLLIG 700
Query: 396 GLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKG 455
L RIDL++ F+ K + +++ T KA + ++ L PP G+
Sbjct: 701 ALARIDLVQGSTALITCFFSHK-ITLHICKTVKAADLLSRKACTFLYPP---HLPAGFDK 756
Query: 456 LDRERLLEIKFEDTERPA-SDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVP 514
L +K A D++I+GLGWISV ++G L V VP
Sbjct: 757 LQPLVRHSVKVHAGNSLAYDDISIAGLGWISV--------------AGSAGPKELHVWVP 802
Query: 515 KPVEVFVRNPM 525
+ V+VF R M
Sbjct: 803 QGVKVFRRPAM 813
>gi|412993269|emb|CCO16802.1| predicted protein [Bathycoccus prasinos]
Length = 644
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 143/314 (45%), Gaps = 38/314 (12%)
Query: 194 FNGSFLARIRDL------AGANPIILVVTKVDLLPKGTDFNCVGDWVVEATTKKKLNVLS 247
F+GSF D GA I+LV KVDL+P + +V + S
Sbjct: 258 FDGSFPVDAVDALEPHAERGAIEIVLVANKVDLMPAQATRARLTQFVRRRAKAFGMQSAS 317
Query: 248 -VHLTSSKSLAGIVGVASEIQKEKKGR------DVYILGSANVGKSAFINALLKKM-GER 299
V L S+ + GI ++ E++ + R DVY++G+ N GKS+ IN L + G
Sbjct: 318 EVLLASATAGMGIRVLSDELEDILRNRGGHKKKDVYVVGAQNAGKSSLINRLSSRYDGPT 377
Query: 300 DPAAAMAQKYRPIQSAVPGTTLGPIQIDAFL-GGGKLYDTPGVHLHHRQAAVVHAEDLPA 358
D P+ S VPGTT+G ++++ L +YDTPG+ H+ +A + A++
Sbjct: 378 DKTGG------PLASHVPGTTIGVLKLEGILPNETDVYDTPGLLQPHQLSARMTADEAKI 431
Query: 359 LAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRIDLLKVLPETC-LTFYGPK 417
+ P+ R+ +++ + G TI GG+ RIDLL T +T +
Sbjct: 432 ILPKKRMIPRTYRIQI--------------GGTIHIGGVSRIDLLDAPQRTIYVTVWCSN 477
Query: 418 SLQVYMVPT--DKADEFYQKELGVTLTPPIGKQKAEGWKGLDRERLLEIKFEDTERPASD 475
+ ++ DE Y K G LTPP+G ++ G R + + + D
Sbjct: 478 DVPLHYTTNGAKNGDEIYAKHAGTKLTPPLGGEEGALRLGRWGSRKVSVYGDSWSESTRD 537
Query: 476 VAISGLGWISVEPV 489
++I+G+GW+++ V
Sbjct: 538 ISIAGVGWVAIACV 551
>gi|221486959|gb|EEE25205.1| conserved hypothetical protein [Toxoplasma gondii GT1]
Length = 1036
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 112/491 (22%), Positives = 200/491 (40%), Gaps = 89/491 (18%)
Query: 88 KDKVLKVNSAVASCYGCGAPLQTSESDAPGYVD--------------------------P 121
+D +++ A C GCGA LQT + G+V P
Sbjct: 358 EDAFEEIHHAPRRCPGCGADLQTEDPARHGFVSAEKKDEWFSGRWKSLPKAKGVPVESVP 417
Query: 122 DTYEL-----KKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYAGGKQ-----FVSADEL 171
D E+ + + + +LC RC + M + G+ A Q +S + +
Sbjct: 418 DGVEVVTVKSPRFRKRTRLLLCRRCYRI---QMYKQLDGDWEAAANAQDQLLPSLSPEAV 474
Query: 172 REKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANP--IILVVTKVDLLPKGTDFNC 229
+ + ++ ++++K+VD+ D S + + + +I ++ +VD LP+
Sbjct: 475 VQSIVKTMKKDSVVLKIVDVCDLESSVVPELFQACRSKRLHVIWLINRVDCLPRTAQKRE 534
Query: 230 VGDWVVEATTK-KKLNVLSVHLTSSKSLAGIVGVASEIQKEK----------KGRDVYIL 278
V +WV + +++ L SS + G + ++ +GR +Y++
Sbjct: 535 VKEWVRRMVRQIDNVHIDDCILVSSATGHGFDELERRLELLLVPTPGGVCTVEGRRIYVV 594
Query: 279 GSANVGKSAFINALLKKMGERDPAAAMAQKYRP--IQSAVPGTTLGPIQIDAFLGGGKLY 336
G N GKS F+ LK + + ++ +SA+PGTTL + G KL
Sbjct: 595 GRVNAGKSTFVTRFLKFINYKHAGTIFMKRASGGVTRSALPGTTLSFLPF-GLPQGFKLI 653
Query: 337 DTPGVHLHHRQAAVV-HAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWG 395
DTPG+ H+ +++ A DL ++ P RL+ ++A+ G ++ G
Sbjct: 654 DTPGIPSRHQITSLLPFAADLYSIVPSKRLQPITYAIT--------------EGKSLLIG 699
Query: 396 GLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKG 455
L RIDL++ F+ K + +++ T KA + ++ L PP G+
Sbjct: 700 ALARIDLVQGSTALITCFFSHK-ITLHICKTVKAADLLSRKACTFLYPP---HLPAGFDK 755
Query: 456 LDRERLLEIKFEDTERPA-SDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVP 514
L +K A D++I+GLGWISV ++G L V VP
Sbjct: 756 LQPLVRHSVKVHAGNSLAYDDISIAGLGWISV--------------AGSAGPKELHVWVP 801
Query: 515 KPVEVFVRNPM 525
+ V+VF R M
Sbjct: 802 QGVKVFRRPAM 812
>gi|301102847|ref|XP_002900510.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262101773|gb|EEY59825.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 513
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 99/201 (49%), Gaps = 12/201 (5%)
Query: 100 SCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGY 159
+C GCG LQ E GY + K + C RC ++ I+
Sbjct: 5 TCSGCGIELQYKEPKQVGYFPKQLLNNVHDLKELKRLRCERCFQMTQYGKISDTK----- 59
Query: 160 AGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVD 219
+ E ++ LR + L+++LVDI+D +GS L + R + G P++LVV K D
Sbjct: 60 ------MPYQEYERRVMELRSKDMLMIQLVDILDISGSLLPKARHIFGKKPVMLVVNKGD 113
Query: 220 LLPKGTDFNCVGDWV-VEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYIL 278
L+P + + + EA N++S++L S+ G+ + ++ K ++ RD+ ++
Sbjct: 114 LVPTKSGIRRLMRRIKQEAKEAGVDNLISIYLISAMKRIGMKEIVEDVAKYRQNRDICVV 173
Query: 279 GSANVGKSAFINALLKKMGER 299
G+ANVGKS F+N+ L + +R
Sbjct: 174 GAANVGKSTFLNSFLSHLVDR 194
>gi|83319349|ref|YP_424399.1| hypothetical protein MCAP_0424 [Mycoplasma capricolum subsp.
capricolum ATCC 27343]
gi|83283235|gb|ABC01167.1| GTP-binding conserved hypothetical protein [Mycoplasma capricolum
subsp. capricolum ATCC 27343]
Length = 367
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 88/391 (22%), Positives = 172/391 (43%), Gaps = 56/391 (14%)
Query: 98 VASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRC-RLLSHGHMITAVGGN 156
+ SC GCG+ LQT+ GYV+ H + C RC ++ ++ ++ +
Sbjct: 1 MKSCLGCGSLLQTTNKFEQGYVNDS-------EHAY----CLRCFKIKNYNQLVDSE--- 46
Query: 157 GGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVT 216
KQF+ +++ + + + + ++DI D GS + I +L +ILVV
Sbjct: 47 ---INDKQFI--NKISTLVKNNKNNNLVFYYVLDIFDLFGSRILEIENLIKDFKVILVVN 101
Query: 217 KVDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVY 276
K+D+LPK + +++ L + + LTS+ + + + +++ K K + Y
Sbjct: 102 KIDILPKSVKLEKIRNYINNIFKNSSLKNVEIFLTSANKINLVEPLLNKVIKNNKNQQ-Y 160
Query: 277 ILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLY 336
+G++NVGKS+ IN +L ++ + P+ +++ + TTL I+I ++
Sbjct: 161 FIGASNVGKSSLINKML-EINQLIPSIVVSKFF--------NTTLDFIEI-QLDKNTTIF 210
Query: 337 DTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGG 396
D+ GV + A +++ R QS+ + +F N +IF+ G
Sbjct: 211 DSAGVSRKNSIANLMNK------------RFQSYCYFKKEIQ--QFTYQLTNNNSIFFSG 256
Query: 397 LVRIDLLKVLPE-TCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKG 455
+ D + + + T Y K + ++ T ++ L P I
Sbjct: 257 VCWFDYISLNNQKTSFHIYTNKEINLHRTNTKNVIRYWNNNRK-NLIPYISNS------- 308
Query: 456 LDRERLLEIKFEDTE-RPASDVAISGLGWIS 485
D+ ++ E KF+ + D++ISGLGWI+
Sbjct: 309 -DQIQVYEFKFDKSHLNNWYDISISGLGWIN 338
>gi|343475714|emb|CCD12971.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 920
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 117/513 (22%), Positives = 193/513 (37%), Gaps = 157/513 (30%)
Query: 101 CYGCGAPLQTSESDAPGYV---DPDTYELKKKH--------------------------- 130
C GCGA LQ + D+ GYV D + Y ++++
Sbjct: 301 CRGCGALLQDQDEDSFGYVRKGDVERYIIERQQKMRARAEYADRMSELQAHWEKHGRQVG 360
Query: 131 -----------------HQFKTVLCGRCRLLSHGHMITAVGGNGGYAGGKQFVSADELRE 173
Q K +C RC L N G G ++ SA + E
Sbjct: 361 EEWLDFMTQEEFDAFYRDQNKPFVCHRCHALE----------NLGVEGRRRIWSAPDFTE 410
Query: 174 KLSHLRREKALIVKLVDIVDFNGSFLARIRDLAG----ANPIILVVTKVDLLPKGTDFNC 229
KL LR +K ++V +VDI DF G+ + DL G N +I+ V K+D + + FN
Sbjct: 411 KLRALREKKCVVVLVVDITDFPGTM---VYDLPGLISMNNDVIIAVNKMDCV-RNRSFNY 466
Query: 230 VGD----------------WVVEATTKKKL------NVLSVHLTSSKSLAGIVGVASE-- 265
G WV + L +V+ + ++ ++ E
Sbjct: 467 SGKDRAIAACLVGEKYIRRWVTGIAVQFGLPRHQIRDVVPISAKRGWNIETLISAVEEAS 526
Query: 266 ---IQKEKKGRDVYILGSANVGKSAFINALLKKM------------------GERDPAAA 304
+++ K Y +G ANVGKS+ INA+ K+ E +
Sbjct: 527 NLNLRRPTKPMPTYFVGVANVGKSSVINAIAHKLYVPLPPHPESRKVYYTKRAEDGKESV 586
Query: 305 MAQKYRP-----------------------IQSAVPGTTLGPIQIDAFLGGGK------L 335
+ Y P S++PGTT+ + + L G L
Sbjct: 587 FWRWYTPPNVNQAEMIDIPSRHDKKASKLLTTSSLPGTTVDAVAVRVSLVRGSNKDRAYL 646
Query: 336 YDTPGVHLH-HRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFW 394
+DTPG+ H HR + + + L + R Q F ++ G T+
Sbjct: 647 FDTPGLLPHWHRHSPLTLLQMRRTLIRKFR-NPQCFILVP--------------GNTLLL 691
Query: 395 GGLVRIDLLKVLPETCL-TFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGW 453
GGL ID++K L Y + ++ ++ TD++DEF+ +LG L PP ++
Sbjct: 692 GGLCAIDIVKGTSRGMLFMVYTSQKVRNAIINTDQSDEFWSSQLGKALDPPGSLEQLGDL 751
Query: 454 KGLD-RERLLEIKFEDTERPASDVAISGLGWIS 485
+ + + L E ++ RP +D+ + GLGW++
Sbjct: 752 RLTESKSYLFECYKRNSRRPKADIYVCGLGWVA 784
>gi|340722480|ref|XP_003399633.1| PREDICTED: uncharacterized protein C4orf14 homolog [Bombus
terrestris]
Length = 753
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/242 (30%), Positives = 116/242 (47%), Gaps = 24/242 (9%)
Query: 95 NSAVAS--CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITA 152
NS ++ C GCGA L + PGY+ + + K K++ C RC L +
Sbjct: 238 NSKISCVPCGGCGALLHCRDPAIPGYLPSELFSFKSDE-DLKSMTCQRCHFLRFYNTALE 296
Query: 153 VGGNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRD-LAGANPI 211
V VS ++ + L ++ +K ++ ++D+ DF S ++ L PI
Sbjct: 297 VK-----------VSIEDYPKLLRVIKSKKCAVILIIDLTDFPCSIWPDLKSILHPFTPI 345
Query: 212 ILVVTKVDLLPKGT-DF-----NCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASE 265
LV K+DLLP + F C+ D V+ T K+ N+ V LTS+K+ GI + ++
Sbjct: 346 FLVGNKIDLLPTDSPSFLENVKQCLVDSVINVTGVKRENITHVQLTSAKTGYGIEHLINK 405
Query: 266 IQ-KEKKGRDVYILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPI 324
+Q K + DVY++G NVGKS+ N LL + A + Q R SA PGTTL +
Sbjct: 406 LQYKWRHKGDVYLVGCTNVGKSSLFNTLLNSDYCKVQAIDLVQ--RATVSAWPGTTLNLL 463
Query: 325 QI 326
+
Sbjct: 464 KF 465
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 77/173 (44%), Gaps = 20/173 (11%)
Query: 336 YDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWG 395
YDTPG + ++ ++L PQ + ++F FK T+F
Sbjct: 560 YDTPGTIQADQILNLLTTDELSLTLPQEIITPRTFM----------FKPKQ----TVFVA 605
Query: 396 GLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVT--LTPPIGKQKAEGW 453
G+ R+D L+ T + K L + + T ADE Y + LG + L P ++ + W
Sbjct: 606 GMGRLDYLEGEHFIRCTLFASKYLPITICCTADADEVYDRLLGTSAFLVPIDDSERLKVW 665
Query: 454 KGLDRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGE 506
L + + EI D E +DV +S +GWI++ P + N ++L + + E
Sbjct: 666 PKLKPKEIREITGVDGEESVADVVLSSIGWIAITP----LENESVSLRAWTPE 714
>gi|158299358|ref|XP_319462.4| AGAP010271-PA [Anopheles gambiae str. PEST]
gi|157014326|gb|EAA13944.4| AGAP010271-PA [Anopheles gambiae str. PEST]
Length = 596
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/234 (32%), Positives = 114/234 (48%), Gaps = 23/234 (9%)
Query: 96 SAVASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGG 155
++ C GCGA L E PGY+ ++ K K Q T C RC L H ++ V
Sbjct: 86 ASTIPCGGCGALLHCIEPSIPGYLPGQLFKGKSKE-QLLTTNCQRCHFLKHYNVAVNVT- 143
Query: 156 NGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGAN-PIILV 214
VSA++ LS ++ +KAL V LVD++DF S + ++ G PII+V
Sbjct: 144 ----------VSANDYIGILSSIKTKKALAVLLVDVLDFPCSIWPGLSEILGVQRPIIVV 193
Query: 215 VTKVDLLPKGTD------FNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQK 268
KVDLLP+ + C+ V+E+ + N+ V L S+ + G+ + ++I
Sbjct: 194 GNKVDLLPQDSAGYLENVRQCLTRSVIESGFSRN-NIKHVSLISASTGYGVEELITKIHN 252
Query: 269 EKKGR-DVYILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTL 321
R DVY++G NVGKS NALL+ + A + QK S PGTT+
Sbjct: 253 VWGTRGDVYLVGCTNVGKSTLFNALLRSDLCKVQATDLIQK--ATASPWPGTTI 304
>gi|433450833|ref|ZP_20412689.1| ribosome biogenesis GTPase YqeH [Mycoplasma sp. G5847]
gi|431933780|gb|ELK20339.1| ribosome biogenesis GTPase YqeH [Mycoplasma sp. G5847]
Length = 367
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 95/395 (24%), Positives = 174/395 (44%), Gaps = 64/395 (16%)
Query: 98 VASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRC-RLLSHGHMITAVGGN 156
+ SC GCG+ LQT+ GYV+ DT H + C RC ++ ++ ++ +
Sbjct: 1 MKSCLGCGSLLQTTNKLEQGYVN-DT------EHAY----CLRCFKIKNYNQLVDSE--- 46
Query: 157 GGYAGGKQFVSADELREKLSHLRREKA----LIVKLVDIVDFNGSFLARIRDLAGANPII 212
+QF++ K+S L +E + ++DI D GS + I +L +I
Sbjct: 47 ---INDEQFIN------KISTLVKENEDNHLVFYYVLDIFDLFGSRILEIENLIKDFQVI 97
Query: 213 LVVTKVDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKG 272
LVV K+DLLPK + +++ LN + LTS+ L + + +++ K K
Sbjct: 98 LVVNKIDLLPKSIKLEKIRNYINNVFKTSSLNDPEIFLTSANKLNLVEPLLNKVIKNNKY 157
Query: 273 RDVYILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGG 332
+ Y +G++NVGKS+ IN +L ++ + P+ +++ + TTL I+I
Sbjct: 158 QQ-YFIGASNVGKSSLINKML-EINKLIPSIVVSKYF--------NTTLDFIEI-QLDKN 206
Query: 333 GKLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTI 392
++D+ GV + A +++ R Q++ + ++F N +I
Sbjct: 207 TTIFDSAGVSRKNSIANLMNK------------RFQNYCYFKKEI--HQFTYQLANNNSI 252
Query: 393 FWGGLVRIDLLKVL-PETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAE 451
F+ G+ D L +T Y K + ++ T ++ +L P I
Sbjct: 253 FFSGVCWFDYLSFSNKKTNFHIYTNKEINLHRTNTKNVTRYWNNNRK-SLIPYINNS--- 308
Query: 452 GWKGLDRERLLEIKFEDTE-RPASDVAISGLGWIS 485
+ ++ E KF + D++ISGLGWI+
Sbjct: 309 -----ENVQVYEFKFTNEHLNNWYDISISGLGWIN 338
>gi|303285748|ref|XP_003062164.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226456575|gb|EEH53876.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 527
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 97/334 (29%), Positives = 151/334 (45%), Gaps = 45/334 (13%)
Query: 136 VLCGRCRLLSHGHMITAVGGNGGYAGGKQFVSADELREKLSHLRREK---ALIVKLVDIV 192
V C RC L H ++ A S D R + L+R A+I+ LVDIV
Sbjct: 103 VTCARCYSLRHHGVVK------NQAAEILMPSFDFGRVVGNKLKRTGPGGAVILLLVDIV 156
Query: 193 DFNGSFLARIRDLAGANP--------IILVVTKVDLLPKGTDFNCVGDWVVEATTKKKLN 244
DF+ SF D +P ++LV KVDLLP V + L
Sbjct: 157 DFDASFPIDAVDFL--DPYVKDETVDVLLVANKVDLLPTRCTRARVSSFARRRAKSHGLR 214
Query: 245 -VLSVHLTSSKSLAGIVGVASEI-QKEKKGRDVYILGSANVGKSAFINALLKKMGERDPA 302
VHL S+ + GI ++ ++ Q + GR+V+++G+ NVGKS+ I L ++ P
Sbjct: 215 KAAGVHLVSAHTGMGINTLSEQLMQLLEDGREVWVVGAQNVGKSSLIVRLSRRFDGPGP- 273
Query: 303 AAMAQKYRPIQSAVPGTTLGPIQIDAFL-GGGKLYDTPGVHLHHRQAAVVHAEDLPALAP 361
+ P+ S +PGTTLG +++ L G +YDTPG+ + ++ + E+ + P
Sbjct: 274 ----EDGGPLASHLPGTTLGVVKLPKLLPNGTDVYDTPGLLQPFQVSSRLTGEEARMVLP 329
Query: 362 QSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRIDLLKVLPETC-LTFYGPKSLQ 420
+ RL +++ V G +I GGL R+D L T LT + +
Sbjct: 330 RRRLSPRTYRVEV--------------GGSIHLGGLARVDYLDGPQRTVYLTVWVSDDVV 375
Query: 421 VYMV---PTDKADEFYQKELGVTLTPPIGKQKAE 451
+ V KAD Y+K G L+PPIG+ + +
Sbjct: 376 SHYVVRGENGKADALYEKHAGGKLSPPIGENRVK 409
>gi|28573544|ref|NP_611297.3| CG10914 [Drosophila melanogaster]
gi|17945519|gb|AAL48812.1| RE23670p [Drosophila melanogaster]
gi|28380737|gb|AAF57738.2| CG10914 [Drosophila melanogaster]
Length = 624
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 115/230 (50%), Gaps = 24/230 (10%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA L + + PGY+ + + + + +T+ C RC L+H ++ V
Sbjct: 109 CNGCGADLHCTNASLPGYIPSEIFR-DRTQQELQTITCKRCHFLNHYNIALDV------- 160
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGA-NPIILVVTKVD 219
V+ + +S ++ + AL + LVD++DF S ++++ GA P+ LV KVD
Sbjct: 161 ----VVAPSTYVDTISRIQDKFALAIVLVDLLDFPCSIWPGMQNILGAKRPVFLVGNKVD 216
Query: 220 LLPKGTDF------NCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQK--EKK 271
LLP+ ++ + + ++ LN+ +V L S+K+ GI + +++ K K
Sbjct: 217 LLPRDSNIYLQHIKDSLQREFIKHGGGNGLNIKNVSLISAKTGYGIEELITQLHKTWAYK 276
Query: 272 GRDVYILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTL 321
G DVY++G NVGKS+ N LL R A+ + +K PGTTL
Sbjct: 277 G-DVYLVGCTNVGKSSLFNILLNSDYCRPEASDLVRK--ATTCPWPGTTL 323
Score = 46.2 bits (108), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 97/238 (40%), Gaps = 49/238 (20%)
Query: 302 AAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPGVHLHHRQAAVVHAEDLPALAP 361
A AMA RPI TTL + + +YDTPGV + + ++ AE+L L P
Sbjct: 391 AFAMAGGSRPI------TTLND-RGKEYKEARWVYDTPGVMQPDQISPLLTAEELVKLQP 443
Query: 362 QSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRIDLLKVL-PETCLTF-----YG 415
+ +R ++F + + +I GGL R+DLL++ P + +
Sbjct: 444 ATMIRPRAFRLRPQ--------------MSILLGGLARLDLLEITSPRKHFDWLKVFVFA 489
Query: 416 PKSLQVYMVPTDKADEFYQKELGVT-LTPPIGKQKAEG----WKGL---DRERLLEIKFE 467
+ L + + T +A+ Y++ +G L P + E W GL D + +L +
Sbjct: 490 SEHLPIMIADTQEAESVYKRYVGSPFLGVPFASENLEARLRRWPGLQCKDGDIVLASEGR 549
Query: 468 DTE-RPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVEVFVRNP 524
+ E R D+ +S GW+ + L E L PK ++ R P
Sbjct: 550 NEETRLNCDITLSSAGWMGI-------------LLPGHSECRLRAWTPKAAGIYRREP 594
>gi|255030450|ref|ZP_05302401.1| GTP-binding protein YqeH [Listeria monocytogenes LO28]
Length = 173
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 94/185 (50%), Gaps = 18/185 (9%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT + D GY K + V+C RC L H + I V
Sbjct: 7 CIGCGAVIQTEDPDKIGYA-------PKSSLNNEQVICKRCFRLKHYNEIQDVA------ 53
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ L+ + ++ALIV +VDI DF+GS+L + AG+NP++LV K D+
Sbjct: 54 -----LTDDDFLRILNQISSKQALIVYVVDIFDFDGSWLPGLPRFAGSNPVLLVGNKEDV 108
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK + + W+ ++ L V L S++ G + +I + + G+DVY++G
Sbjct: 109 LPKSLKRDKLTRWMRTRAKEQGLAATDVVLVSAEKGHGFDTLLEKIDELRNGQDVYVVGC 168
Query: 281 ANVGK 285
NVGK
Sbjct: 169 TNVGK 173
>gi|419524131|ref|ZP_14063706.1| GTPase family protein [Streptococcus pneumoniae GA13723]
gi|379556539|gb|EHZ21594.1| GTPase family protein [Streptococcus pneumoniae GA13723]
Length = 196
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 107/208 (51%), Gaps = 26/208 (12%)
Query: 243 LNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGSANVGKSAFINALLKKM-GERDP 301
L + V LTS+++ I V +I+ +KGRDVY++G NVGKS INA+++++ G+++
Sbjct: 9 LRPVDVVLTSAQNKYAIKEVIDKIEHYRKGRDVYVVGVTNVGKSTLINAIIQEITGDQNV 68
Query: 302 AAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPGVHLHHRQAAVVHAEDLPALAP 361
S PGTTL I+I G +YDTPG+ H+ A + A++L ++P
Sbjct: 69 ITT---------SRFPGTTLDKIEI-PLDDGSYIYDTPGIIHRHQMAHYLTAKNLKYVSP 118
Query: 362 QSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRIDLLKVLPETCLTFYGPKSLQV 421
+ ++ +++ + E T+F GGL R D + + F+ L++
Sbjct: 119 KKEIKPKTYQLNPEQ--------------TLFLGGLGRFDFIAGEKQGFTAFFD-NELKL 163
Query: 422 YMVPTDKADEFYQKELGVTLTPPIGKQK 449
+ + A FY K LG LTPP K+K
Sbjct: 164 HRSKLEGASAFYDKHLGTLLTPPNSKEK 191
>gi|350418813|ref|XP_003491975.1| PREDICTED: uncharacterized protein C4orf14 homolog [Bombus
impatiens]
Length = 751
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 73/240 (30%), Positives = 113/240 (47%), Gaps = 22/240 (9%)
Query: 95 NSAVASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVG 154
N + C GCGA L + PGY+ + + K K++ C RC L + V
Sbjct: 238 NVSCVPCGGCGALLHCRDPAIPGYLPSELFSFKN-DEDLKSMTCQRCHFLKFYNTALEVK 296
Query: 155 GNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRD-LAGANPIIL 213
VS ++ + L ++ +K ++ ++D+ DF S ++ L PI L
Sbjct: 297 -----------VSIEDYPKLLRVIKSKKCAVILIIDLTDFPCSIWPDLKSVLHPFTPIFL 345
Query: 214 VVTKVDLLPKGT-DF-----NCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQ 267
V KVDLLP + F C+ D V+ T K+ N+ V L S+K+ GI + +++Q
Sbjct: 346 VGNKVDLLPTDSPSFLENVKQCLLDSVIGVTGVKRENITHVQLMSAKTGYGIEHLINKLQ 405
Query: 268 -KEKKGRDVYILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQI 326
K + DVY++G NVGKS+ N LL + A + Q R SA PGTTL ++
Sbjct: 406 YKWRHKGDVYLVGCTNVGKSSLFNTLLNSDYCKVQAIDLVQ--RATVSAWPGTTLNLLKF 463
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 75/173 (43%), Gaps = 20/173 (11%)
Query: 336 YDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWG 395
YDTPG + ++ ++L PQ + ++F + T+F
Sbjct: 558 YDTPGTIQSDQILNLLTTDELSLTLPQEIITPRTFMFRPKQ--------------TVFVA 603
Query: 396 GLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTL--TPPIGKQKAEGW 453
G+ R+D L+ T + + L + M T ADE Y + LG + P ++ + W
Sbjct: 604 GMGRLDYLEGEHFIRCTLFASEHLPITMCRTTDADEVYDRLLGTSAFRVPIDDSERLKVW 663
Query: 454 KGLDRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGE 506
L + + EI + E +DV +S +GWI++ P + N ++L + + E
Sbjct: 664 PKLKPKEIREITGVNGEESVADVVLSSIGWIAITP----LENESVSLRAWTPE 712
>gi|195487584|ref|XP_002091970.1| GE11927 [Drosophila yakuba]
gi|194178071|gb|EDW91682.1| GE11927 [Drosophila yakuba]
Length = 623
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 72/230 (31%), Positives = 114/230 (49%), Gaps = 24/230 (10%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA L S + PGY+ + + + + +T+ C RC L+H ++ V
Sbjct: 109 CNGCGANLHCSNASLPGYIPSEIFR-GRTQEELQTITCKRCYFLNHYNIALDVE------ 161
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAG-ANPIILVVTKVD 219
V+ + +S ++ + AL + LVD++DF S +++L G P+ LV KVD
Sbjct: 162 -----VAPSTYVDTISRIQDKFALAIVLVDLLDFPCSIWPGMQNLLGPKRPVFLVGNKVD 216
Query: 220 LLPKGTD--FNCVGDWVVEATTK----KKLNVLSVHLTSSKSLAGIVGVASEIQKE--KK 271
LLP+ ++ + D + K LN+ +V L S+K+ GI + +++ K K
Sbjct: 217 LLPRDSNVYLQHIKDSLQREFIKHGGGDGLNIKNVSLISAKTGYGIEELITQLHKTWAYK 276
Query: 272 GRDVYILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTL 321
G DVY+LG NVGKS+ N LL R A+ + +K PGTTL
Sbjct: 277 G-DVYLLGCTNVGKSSLFNILLNSDYCRPEASDLVRK--ATTCPWPGTTL 323
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 71/164 (43%), Gaps = 28/164 (17%)
Query: 335 LYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFW 394
+YDTPGV + + ++ AE+L L P S +R ++F + + +I
Sbjct: 417 VYDTPGVMQPDQISPLLTAEELVKLQPTSMIRPRAFRLRPQ--------------MSILL 462
Query: 395 GGLVRIDLLKV------LPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVT-LTPPIGK 447
GGL R+DLL++ + + P L + + T A+ Y + LG L P
Sbjct: 463 GGLARLDLLEITSARKQFDWLKVFVFAPVQLPILIADTQAAESVYNRYLGSPFLGVPFAS 522
Query: 448 QKAEG----WKGL---DRERLLEIKFEDTERPASDVAISGLGWI 484
+ E W GL D + +L + + R D+ +S GW+
Sbjct: 523 EDLEARLRRWPGLQCRDEDIVLASEERNEGRLNCDITLSSAGWM 566
>gi|307196380|gb|EFN77969.1| Uncharacterized protein C4orf14-like protein [Harpegnathos
saltator]
Length = 621
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 75/237 (31%), Positives = 117/237 (49%), Gaps = 23/237 (9%)
Query: 95 NSAVAS--CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITA 152
+S V+S C GCGA L + PGY+ P LK+ + + ++C RC + + + +
Sbjct: 109 DSTVSSVPCGGCGALLHCKDHAIPGYL-PSELFLKRSERKLRLMICQRCHFMKYYNAMLE 167
Query: 153 VGGNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPII 212
V VS DE E L ++ +K ++ +VD+ DF S I+ + ++
Sbjct: 168 VK-----------VSPDEFAELLKVIKTKKCAVILMVDLTDFPCSIWPEIKSVLHPYTMV 216
Query: 213 LVV-TKVDLLPKGTD--FNCVGDWV---VEATTKKKLNVLSVHLTSSKSLAGIVGVASEI 266
VV K+DLLP+ + F V D + VE T K + V L S+K+ GI + +++
Sbjct: 217 FVVGNKIDLLPQDSPEFFTHVKDCLLKTVENTGINKNFIKYVGLVSAKTGYGIEQLINKL 276
Query: 267 QKEKKGR-DVYILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLG 322
K + DVY++G NVGKS+ N LL+ + AA + Q R S PGTTL
Sbjct: 277 HALWKYKGDVYVIGCTNVGKSSLFNVLLQSDYCKVQAADLIQ--RATISPWPGTTLN 331
>gi|401406948|ref|XP_003882923.1| Predicted GTPases (ISS), related [Neospora caninum Liverpool]
gi|325117339|emb|CBZ52891.1| Predicted GTPases (ISS), related [Neospora caninum Liverpool]
Length = 839
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 115/499 (23%), Positives = 199/499 (39%), Gaps = 105/499 (21%)
Query: 88 KDKVLKVNSAVASCYGCGAPLQTSESDAPGYVD--------------------------P 121
+D +++ A C GCGA LQT + G+V P
Sbjct: 155 EDAFQEIHHAPRRCPGCGAELQTEDPSRQGFVSAEKKEEWYSGRWKSLPKAKGVEVDSVP 214
Query: 122 DTYE-LKKKHHQFKT----VLCGRCRLLSHGHMITAVGGNGGYAGGKQ-----FVSADEL 171
D E + K +F+ +LC RC + M + G A Q + + +
Sbjct: 215 DGVEVITVKSPRFRKRTRLLLCRRCYRI---QMYKQLDGQWEAAANAQDALLPSLEPETV 271
Query: 172 REKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANP--IILVVTKVDLLPKGTDFNC 229
+ ++ ++++KLVD+ D S + + + +I ++ ++D LP+
Sbjct: 272 VNAIVKTMKKDSVVLKLVDVCDLESSVVPELFQACRSKRLHVIWLINRIDCLPRTAQKRE 331
Query: 230 VGDWVVEATTK-KKLNVLSVHLTSSKSLAGIVGVASEIQ----------KEKKGRDVYIL 278
V +WV + +++ L SS + G + ++ +GR +Y++
Sbjct: 332 VKEWVRRMVRQIDNVHIDDCILVSSATGEGFEDLERRLEHLLVPAPGGVSAVEGRRIYVV 391
Query: 279 GSANVGKSAFINALLKKMGERDPAAAMAQKYRP--IQSAVPGTTLGPIQIDAFLGGG--- 333
G N GKS F+ LK + + ++ +SA+PGTTL +FL G
Sbjct: 392 GRVNAGKSTFVTRFLKFINYKHAGTIFMKRASGGVTRSAMPGTTL------SFLPFGLPK 445
Query: 334 --KLYDTPGVHLHHRQAAVVH-AEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGF 390
KL DTPG+ H+ +++ A DL ++ P RL+ ++AV G
Sbjct: 446 DFKLIDTPGIPSRHQVTSLLRFAADLYSIVPSKRLQPITYAVT--------------EGK 491
Query: 391 TIFWGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKA 450
++ G + RIDL + +T Y + +++ T KA + ++ L PP
Sbjct: 492 SLLIGAMARIDLAQG-STALITCYFSHKITLHICKTVKAADLLSRKACTFLYPPHLP--- 547
Query: 451 EGWKGLDRERLL---EIKFEDTERPA-SDVAISGLGWISVEPVRRSIRNSDINLESTSGE 506
G DR + L +K A D++I+GLGWISV +G
Sbjct: 548 ---AGFDRLQPLVRHSVKVHAGNSTAYDDISIAGLGWISV--------------AGAAGP 590
Query: 507 LHLAVHVPKPVEVFVRNPM 525
L V P+ V++F R M
Sbjct: 591 KELHVWAPQGVKIFRRPAM 609
>gi|342181471|emb|CCC90950.1| unnamed protein product, partial [Trypanosoma congolense IL3000]
Length = 578
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 116/513 (22%), Positives = 193/513 (37%), Gaps = 157/513 (30%)
Query: 101 CYGCGAPLQTSESDAPGYV---DPDTYELKKKH--------------------------- 130
C GCGA LQ + D+ GYV D + Y ++++
Sbjct: 32 CRGCGALLQDQDEDSFGYVRKGDVERYIIERQQKMRARAEYADRMSELQAHWEKHGRQVG 91
Query: 131 -----------------HQFKTVLCGRCRLLSHGHMITAVGGNGGYAGGKQFVSADELRE 173
Q K +C RC L N G G ++ SA + E
Sbjct: 92 EEWLDFMTQEEFDAFYRDQNKPFVCHRCHALE----------NLGVEGRRRIWSAPDFTE 141
Query: 174 KLSHLRREKALIVKLVDIVDFNGSFLARIRDLAG----ANPIILVVTKVDLLPKGTDFNC 229
KL LR +K ++V +VDI DF G+ + DL G N +I+ V K+D + + F+
Sbjct: 142 KLRALREKKCVVVLVVDITDFPGTM---VYDLPGLISMNNDVIIAVNKMDCV-RNRSFSY 197
Query: 230 VGD----------------WVVEATTKKKL------NVLSVHLTSSKSLAGIVGVASE-- 265
G WV + L +V+ + ++ ++ E
Sbjct: 198 SGKDRAIAACLVGEKYIRRWVTGIAVQFGLPRHQIRDVVPISAKRGWNIETLISAVEEAS 257
Query: 266 ---IQKEKKGRDVYILGSANVGKSAFINALLKKM------------------GERDPAAA 304
+++ K Y +G ANVGKS+ INA+ K+ E +
Sbjct: 258 NLNLRRPTKPMPTYFVGVANVGKSSVINAIAHKLYVPLPPHPESRKVYYTKRAEDGKESV 317
Query: 305 MAQKYRP-----------------------IQSAVPGTTLGPIQIDAFLGGGK------L 335
+ Y P S++PGTT+ + + L G L
Sbjct: 318 FWRWYTPPNVNQAEMIDIPSRHDKKASKLLTTSSLPGTTVDAVAVRVSLVRGSNKDRAYL 377
Query: 336 YDTPGVHLH-HRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFW 394
+DTPG+ H HR + + + L + R Q F ++ G T+
Sbjct: 378 FDTPGLLPHWHRHSPLTLLQMRRTLIRKFR-NPQCFILVP--------------GNTLLL 422
Query: 395 GGLVRIDLLKVLPETCL-TFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGW 453
GGL ID++K L Y + ++ ++ TD++DEF+ +LG L PP ++
Sbjct: 423 GGLCAIDIVKGTSRGMLFMVYTSQKVRNAIINTDQSDEFWSSQLGKALDPPGSLEQLGDL 482
Query: 454 KGLD-RERLLEIKFEDTERPASDVAISGLGWIS 485
+ + + L E ++ RP +D+ + GLGW++
Sbjct: 483 RLTESKSYLFECYKRNSRRPKADIYVCGLGWVA 515
>gi|307177178|gb|EFN66411.1| Uncharacterized protein C4orf14 [Camponotus floridanus]
Length = 697
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/242 (30%), Positives = 116/242 (47%), Gaps = 25/242 (10%)
Query: 95 NSAVAS--CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITA 152
NS ++S C GCGA L + PGY+ P L K + + ++C RC + + +
Sbjct: 169 NSKISSVPCGGCGALLHCKDHALPGYL-PSELFLNKSEKELRVMVCQRCHFMKYYNTTLE 227
Query: 153 VGGNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRD-LAGANPI 211
V VSADE + L ++ +K ++ +VD+ DF S I L P+
Sbjct: 228 VK-----------VSADEYPKLLKVIKTKKCAVILMVDLTDFPCSIWPEINSVLHPLTPV 276
Query: 212 ILVVTKVDLLPKGTDF------NCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASE 265
+V KVDLLP+ + C+ V A KK+ + + L S+K+ GI + ++
Sbjct: 277 FVVGNKVDLLPQDSPHFFTHVKECLSKAVENAGIKKE-KIRHIELISAKTGYGIEELINK 335
Query: 266 IQKEKKGR-DVYILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPI 324
+ K + DVY++G NVGKS+ NALL+ + A + Q R S PGTTL +
Sbjct: 336 LHSLWKYKGDVYVIGCTNVGKSSLFNALLQSDYCKVQAVDLIQ--RATISPWPGTTLNLL 393
Query: 325 QI 326
+
Sbjct: 394 KF 395
>gi|321475687|gb|EFX86649.1| hypothetical protein DAPPUDRAFT_313052 [Daphnia pulex]
Length = 710
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 114/233 (48%), Gaps = 21/233 (9%)
Query: 97 AVASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGN 156
++ C GCGA L PGY+ + + + H + +C RCR L + V
Sbjct: 203 SIIPCGGCGAKLHCQSPSIPGYLPSEIFS-SFQTHDLRGQICQRCRFLRDHDVALNVN-- 259
Query: 157 GGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGA-NPIILVV 215
+S +E + +S +R + A+++ +VD++DF S + D+ G P+ +V
Sbjct: 260 ---------ISPEEYPKVISVIRDQVAMVILVVDLLDFPCSIWPGLLDIIGTKRPVCVVG 310
Query: 216 TKVDLLPKGTD--FNCVGDWVV---EATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEK 270
KVDL+PK + N + +V E + + N+ V L S+ + G+ + ++IQ
Sbjct: 311 NKVDLIPKDSRGYLNHIQKCLVNELENSGINRANIKLVSLISATTGFGVEQLITKIQNSW 370
Query: 271 KGR-DVYILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLG 322
R DVY+LG NVGKS+ NAL+ + A+ + + R SA PGTTL
Sbjct: 371 GARGDVYLLGCTNVGKSSLFNALISSDFCKTQASDLLE--RATVSAWPGTTLN 421
>gi|313665313|ref|YP_004047184.1| ribosome biogenesis GTPase YqeH [Mycoplasma leachii PG50]
gi|392388747|ref|YP_005907156.1| hypothetical protein MLEA_002390 [Mycoplasma leachii 99/014/6]
gi|312949512|gb|ADR24108.1| ribosome biogenesis GTPase YqeH [Mycoplasma leachii PG50]
gi|339276392|emb|CBV66971.1| Putative uncharacterized protein [Mycoplasma leachii 99/014/6]
Length = 367
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 92/397 (23%), Positives = 173/397 (43%), Gaps = 68/397 (17%)
Query: 98 VASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRC-RLLSHGHMITAVGGN 156
+ SC GCG+ LQT+ GYV+ H + C RC ++ ++ ++ +
Sbjct: 1 MKSCLGCGSLLQTTNKLEQGYVNDS-------EHAY----CLRCFKIKNYNQLVDSE--- 46
Query: 157 GGYAGGKQFVSADELREKLSHLRREKA----LIVKLVDIVDFNGSFLARIRDLAGANPII 212
K+F++ K+S L +E + ++DI D GS + I +L +I
Sbjct: 47 ---INDKEFIN------KISTLIKENKNNNLVFYYVLDIFDLFGSRILEIENLIKDFKVI 97
Query: 213 LVVTKVDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKG 272
LVV K+DLLPK + +++ L + + LTS+ + + + +++ K K
Sbjct: 98 LVVNKIDLLPKSIKLEKIRNYINNIFKNSFLKNVEIFLTSANKINLVEPLLNKVIKNNKN 157
Query: 273 RDVYILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLG--PIQIDAFL 330
+ Y +G++NVGKS+ IN +L ++ + P+ +++ + TTL IQ+D
Sbjct: 158 QQ-YFIGASNVGKSSLINKML-EINQLIPSIVVSKFF--------NTTLDFIKIQLDT-- 205
Query: 331 GGGKLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGF 390
++D+ GV + A +++ R QS+ + +F N
Sbjct: 206 -NTTIFDSAGVSRKNSIANLMNK------------RFQSYCYFKKEIQ--QFTYQLTNNN 250
Query: 391 TIFWGGLVRIDLLKVLPE-TCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQK 449
+IF+ G+ D + + T Y K + ++ T ++ L P I
Sbjct: 251 SIFFSGVCWFDYISSNNQKTSFHIYTNKEINLHRTNTKNVIRYWNNNRK-NLIPYINNS- 308
Query: 450 AEGWKGLDRERLLEIKF-EDTERPASDVAISGLGWIS 485
++ ++ E KF ++ D++ISGLGWI+
Sbjct: 309 -------EKIQVYEFKFTKEHLNNWYDISISGLGWIN 338
>gi|159485524|ref|XP_001700794.1| NO synthase-like protein [Chlamydomonas reinhardtii]
gi|158281293|gb|EDP07048.1| NO synthase-like protein [Chlamydomonas reinhardtii]
Length = 733
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 115/463 (24%), Positives = 186/463 (40%), Gaps = 101/463 (21%)
Query: 101 CYGCGAPLQTSESDAPGYV-----------DPDTYE------------------------ 125
C GCG LQ +++APGY DPD E
Sbjct: 161 CCGCGMRLQRRDAEAPGYFIIPARLFEPKRDPDADEDGFGRAGRGRGGAGAGAEAGGELG 220
Query: 126 --LKKKHHQFKT--------------------VLCGRCRLLSHGHMITAVGGNGGYAGGK 163
+K + VLC RC L H +
Sbjct: 221 ELMKAARQEMDADAEADAYDDVGLVRADEEPDVLCQRCFSLKHSGKVKVQAAETAL---P 277
Query: 164 QFVSADELREKLSHLRREKALIVKLVDIVDFNGSF-LARIRDL-------AGANP----- 210
F ++ K+ + +A+++ +VD+ DF+GS A +R L A P
Sbjct: 278 DFDLGKKVGRKIHLQKDRRAVVLCVVDMWDFDGSLPRAALRSLLPPGVTSEAAAPEDLKF 337
Query: 211 -IILVVTKVDLLPKGTDFNCVGDWVVEATTKKKLNVLS-VHLTSSKSLAGIVGVASEIQK 268
+++ K DLLP V WV + L V L S+ G+ + ++++
Sbjct: 338 SLMVAANKFDLLPPQATPARVQQWVRLRLKQAGLPPPDKVFLVSAAKGTGVKDMVQDVRQ 397
Query: 269 EKKGR-DVYILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQID 327
R D++++G+ N GKS+ I A+ K++ A A K P + VPGTTLG +Q+
Sbjct: 398 ALGYRGDLWVVGAQNAGKSSLIAAM-KRL------AGTAGKGEPTIAPVPGTTLGLLQVP 450
Query: 328 AFLGGGK--LYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSH 385
G K +DTPGV H+ + + ED+ + P L+G+++ +
Sbjct: 451 GLPLGPKHRAFDTPGVPHGHQLTSRLGLEDVKQVLPSKPLKGRTYRLAP----------- 499
Query: 386 GLNGFTIFWGGLVRIDLLKVLPETC-LTFYGPKSLQVYMVPTDKADEFYQKEL-GVTLTP 443
+ GGL R+D++ T LT + + +++ T+ A+E + + G LTP
Sbjct: 500 --GNTLLIGGGLARLDVVSSPGATLYLTVFVSHHVNLHLGKTEGAEERLPRLVEGGLLTP 557
Query: 444 PIGKQKAEGWKGLDRERLLEIKFEDTERPASDVAISGLGWISV 486
P +AE L +E++ D R DVAI+GLGW+ V
Sbjct: 558 PDDPARAEQLPPL-VPLDVEVEGTDWRRSTVDVAIAGLGWVGV 599
>gi|331703546|ref|YP_004400233.1| GTPase [Mycoplasma mycoides subsp. capri LC str. 95010]
gi|328802101|emb|CBW54255.1| Conserved hypothetical protein, probable GTPase [Mycoplasma
mycoides subsp. capri LC str. 95010]
Length = 367
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 93/393 (23%), Positives = 173/393 (44%), Gaps = 60/393 (15%)
Query: 98 VASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRC-RLLSHGHMITAVGGN 156
+ SC GCG+ LQT GYV+ DT H + C RC ++ ++ ++ +
Sbjct: 1 MKSCLGCGSLLQTINKFEQGYVN-DT------EHAY----CLRCFKIKNYNQLVDSE--- 46
Query: 157 GGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVT 216
+QF+ +++ ++ + + ++DI D GS + I +L +ILVV
Sbjct: 47 ---INDQQFI--NKISTLVNENKNNDLVFYYVLDIFDLFGSRILEIENLIKDFKVILVVN 101
Query: 217 KVDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVY 276
K+DLLPK + +++ L L + LTS+ + + + +++ K K + Y
Sbjct: 102 KIDLLPKSIKLEKIRNYINNVFKTSCLKNLEIFLTSANKINLVEPLLNKVIKNNKNQQ-Y 160
Query: 277 ILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLG--PIQIDAFLGGGK 334
+G++NVGKS+ IN +L ++ + P+ +++ + TTL IQ+DA
Sbjct: 161 FIGASNVGKSSLINKML-EINQLIPSIVVSKFF--------NTTLDFIEIQLDA---NTT 208
Query: 335 LYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFW 394
++D+ GV + A +++ R QS+ + +F +IF+
Sbjct: 209 IFDSAGVSRKNSIANLMNK------------RFQSYCYFKKEIQ--QFTYQLTPNNSIFF 254
Query: 395 GGLVRIDLLKVLPE-TCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGW 453
G+ D L + T Y K + ++ T ++ L P I
Sbjct: 255 SGVCWFDYLSSSNQKTNFHIYTNKEINLHRTNTKNVIRYWNNNRK-NLIPYINNS----- 308
Query: 454 KGLDRERLLEIKF-EDTERPASDVAISGLGWIS 485
D+ ++ E KF ++ D++ISGLGWI+
Sbjct: 309 ---DKIQVYEFKFTKEHLNNWYDISISGLGWIN 338
>gi|380014450|ref|XP_003691245.1| PREDICTED: nitric oxide-associated protein 1-like [Apis florea]
Length = 419
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 115/238 (48%), Gaps = 24/238 (10%)
Query: 95 NSAVAS--CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITA 152
+S V+S C GCGA L + + PGY+ + + K K+ +C RC L +
Sbjct: 143 DSEVSSIPCGGCGALLHCKDPEIPGYLPLELFS-KNNDEDLKSTICQRCHFLKFYNSALE 201
Query: 153 VGGNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGA-NPI 211
V VS ++ L ++ +K I+ ++D+ DF S ++ + PI
Sbjct: 202 VK-----------VSIEDYPNLLKVIKTKKCAIILIIDLTDFPCSIWPDLKSIMHPFTPI 250
Query: 212 ILVVTKVDLLPKGT-DF-----NCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASE 265
LV KVDLLP+ + F + + VV T KK N+ + L S+K+ GI + ++
Sbjct: 251 FLVGNKVDLLPRDSPKFLENIKQLLANTVVHVTGVKKENITHIQLISAKTGYGIEQLINK 310
Query: 266 IQKEKKGR-DVYILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLG 322
+Q + + + DVY++G NVGKS+ N LL + A + Q R SA PGTTL
Sbjct: 311 LQHKWRYKGDVYLVGCTNVGKSSLFNTLLNSDYCKVQAVDLVQ--RATVSAWPGTTLN 366
>gi|340756111|ref|ZP_08692744.1| ribosome biogenesis GTPase YqeH [Fusobacterium sp. D12]
gi|373114391|ref|ZP_09528604.1| ribosome biogenesis GTPase YqeH [Fusobacterium necrophorum subsp.
funduliforme 1_1_36S]
gi|419841285|ref|ZP_14364660.1| ribosome biogenesis GTPase YqeH [Fusobacterium necrophorum subsp.
funduliforme ATCC 51357]
gi|421500652|ref|ZP_15947644.1| ribosome biogenesis GTPase YqeH [Fusobacterium necrophorum subsp.
funduliforme Fnf 1007]
gi|313686863|gb|EFS23698.1| ribosome biogenesis GTPase YqeH [Fusobacterium sp. D12]
gi|371652385|gb|EHO17801.1| ribosome biogenesis GTPase YqeH [Fusobacterium necrophorum subsp.
funduliforme 1_1_36S]
gi|386905611|gb|EIJ70371.1| ribosome biogenesis GTPase YqeH [Fusobacterium necrophorum subsp.
funduliforme ATCC 51357]
gi|402267206|gb|EJU16602.1| ribosome biogenesis GTPase YqeH [Fusobacterium necrophorum subsp.
funduliforme Fnf 1007]
Length = 362
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 125/273 (45%), Gaps = 32/273 (11%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG PLQ ++S GY D L K + C RC +SH G ++
Sbjct: 5 CIGCGIPLQNTDSKKGGYTPKD---LTGKEELY----CQRCFRISH---------YGEHS 48
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
F+S ++ +++L + L + + DI+DF GSF I D+ I+V+ KVDL
Sbjct: 49 S--SFLSREDYQKELQQWVSPQRLALAIFDIIDFEGSFQDDILDILREMDSIVVINKVDL 106
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQK-EKKGRDVYILG 279
+P + V +WV + + L + + S K+ G+ G+ +I G +V +LG
Sbjct: 107 IPGEKHPSEVANWVKGRLASEGIAPLDIAIVSCKNNYGMNGILRKIHHFYPNGVEVLVLG 166
Query: 280 SANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTP 339
NVGKS+ +N LL GE R S PGTTL + +L DTP
Sbjct: 167 VTNVGKSSVVNRLL---GEN----------RVTVSKYPGTTLLSTFHEITGTKLRLIDTP 213
Query: 340 GVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAV 372
G+ R + +V ED + P + + ++F +
Sbjct: 214 GLIPGGRFSDLVIEEDQLKIIPSTEISRKTFKL 246
>gi|195123554|ref|XP_002006270.1| GI18656 [Drosophila mojavensis]
gi|193911338|gb|EDW10205.1| GI18656 [Drosophila mojavensis]
Length = 547
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 116/237 (48%), Gaps = 24/237 (10%)
Query: 94 VNSAVASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAV 153
V + C GCGA L + + PGY+ + ++ + K + +T+ C RC L + ++ V
Sbjct: 28 VPPSTVPCNGCGAHLHCANTSMPGYIPSEIFKGRTKT-ELQTITCQRCHFLKNYNIALDV 86
Query: 154 GGNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGA-NPII 212
V E +S ++ + AL + +VD++DF S ++ + G+ P+
Sbjct: 87 E-----------VPPSAYVETISRIQDKYALAIIIVDLLDFPCSIWPGMQQVIGSKRPVF 135
Query: 213 LVVTKVDLLPKGTDF------NCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEI 266
LV KVDLLP+ + +C+ +E LN+ +V L S+K+ GI + +++
Sbjct: 136 LVGNKVDLLPRDCNNYLTHVKSCLKQQFIEHGGFNALNIKNVSLISAKTGFGIEELITQL 195
Query: 267 QK--EKKGRDVYILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTL 321
KG DVY++G NVGKS+ N LL R A+ + +K A PGTTL
Sbjct: 196 HNVWAYKG-DVYLVGCTNVGKSSLFNILLNSDYCRPEASELVRK--ATTCAWPGTTL 249
Score = 46.2 bits (108), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 114/281 (40%), Gaps = 62/281 (22%)
Query: 263 ASEIQKEKKGRDVYILGSAN----VGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPG 318
A E + ++ +D + SA VG++ F N L E D A AMA +PI S
Sbjct: 280 ALEKMRREQAKDTGAVTSAQLIGTVGRT-FNNRL-----EVDDAFAMASGTQPIVSLNER 333
Query: 319 TTLGPIQIDAFLGGGKLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETET 378
+ +YDTPGV + ++ ++L L P L+ ++ + S+
Sbjct: 334 KA-------EYREARWVYDTPGVMQPDQLTPLLTTQELLHLQPTKMLKPRAVRLPSK--- 383
Query: 379 NNEFKSHGLNGFTIFWGGLVRIDLLKVLPETCLTF-YGPKSLQVYMVPTDKADEFYQKEL 437
++ GGL R+DLL+ F + ++L + + T A+ Y++ L
Sbjct: 384 -----------MSLLLGGLARVDLLECNRSWVKLFVFAAETLPILIADTSAAELVYKRYL 432
Query: 438 GVTLTPPIGKQKAEG-------WKGLD-RERLLEIK------FEDTERPASDVAISGLGW 483
G TP +G + G W GL E+ + +K +D ++ D+ +S GW
Sbjct: 433 G---TPLLGVPMSSGDETRLQRWPGLQCMEKDIVVKNGALDSIDDGKQLNCDIVLSSAGW 489
Query: 484 ISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVEVFVRNP 524
+ + L + E + V P+ ++VR P
Sbjct: 490 LGL-------------LMPENSECIMRVWTPQAAGIYVRKP 517
>gi|301616297|ref|XP_002937599.1| PREDICTED: uncharacterized protein C4orf14-like [Xenopus (Silurana)
tropicalis]
Length = 710
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/260 (30%), Positives = 124/260 (47%), Gaps = 36/260 (13%)
Query: 79 RDSKKKRKKK-----DKVLKVNSAVASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQF 133
+D +KR+ K D L V+ C GCGA L + E PGY+ + Y K
Sbjct: 147 KDVNRKRQHKIYGNPDPNLPVSGE--QCTGCGAVLHSLEPSLPGYLPSEKYASFLKCKDS 204
Query: 134 KTVLCGRCRLLSHGHMITAVGGNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVD 193
++C RC LL + V VS +E R + ++ +K L++ +VD++D
Sbjct: 205 NELMCQRCCLLIYHQKALHVK-----------VSQEEYRSIVKSIQTKKGLVLFMVDMLD 253
Query: 194 FNGSFLARIRDLAGANPIILVV-TKVDLLP----------KGTDFNCVGDWVVEATTKKK 242
S + D+ G N ILV+ KVDLLP KG + D+ +A
Sbjct: 254 IPDSIFPDLIDIVGENKSILVLGNKVDLLPGDSPGYLKYLKGQ----LHDYCTKAGLNWM 309
Query: 243 LNVLSVHLTSSKSLAGIVGVASEIQKEKKGR-DVYILGSANVGKSAFINALLKKMGERDP 301
N+ VHL S+K+ G+ + S++Q+ K + DVY++G+ N GKS N LL+ ++
Sbjct: 310 GNITDVHLLSAKTGYGVEELISKLQQSWKYKGDVYLVGATNAGKSTLFNTLLQSDYCKEK 369
Query: 302 AAAMAQKYRPIQSAVPGTTL 321
A+ + ++ S PGTTL
Sbjct: 370 ASEIIKE--ATISPWPGTTL 387
>gi|205374257|ref|ZP_03227056.1| GTP-binding protein YqeH [Bacillus coahuilensis m4-4]
Length = 164
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 89/167 (53%), Gaps = 11/167 (6%)
Query: 194 FNGSFLARIRDLAGANPIILVVTKVDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSS 253
FNGS+L + G+NP++L+ KVDLLPK + + W+ + + L + V L S+
Sbjct: 3 FNGSWLPGLHRFVGSNPVLLIGNKVDLLPKSVKPSKLVHWMKKEAKELGLKPVDVQLISA 62
Query: 254 KSLAGIVGVASEIQKEKKGRDVYILGSANVGKSAFINALLKKM-GERDPAAAMAQKYRPI 312
I+ I+ +KG+DVYI+G NVGKS FIN +++++ GE++
Sbjct: 63 DKGTNILKALELIETYRKGQDVYIVGCTNVGKSTFINRIIQEVSGEKNVITT-------- 114
Query: 313 QSAVPGTTLGPIQIDAFLGGGKLYDTPGVHLHHRQAAVVHAEDLPAL 359
S PGTTL I+I G L DTPG+ HH+ A V + L L
Sbjct: 115 -SHFPGTTLDMIEI-PLDDGQALIDTPGIINHHQMAHYVDKKSLKPL 159
>gi|312379364|gb|EFR25662.1| hypothetical protein AND_08807 [Anopheles darlingi]
Length = 691
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/229 (31%), Positives = 110/229 (48%), Gaps = 23/229 (10%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA L + PGY+ ++ K K Q +C RC L H ++ V
Sbjct: 200 CGGCGALLHCIDHSIPGYLPSQLFKGKSKE-QLTHTICQRCHFLKHYNVAINVS------ 252
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGAN-PIILVVTKVD 219
VS+++ E L +R +KAL + LVD+ DF S + D+ G N P+I+ KVD
Sbjct: 253 -----VSSEDYIELLLSIRSKKALALLLVDLTDFPCSIWPGMADILGPNRPVIVAGNKVD 307
Query: 220 LLPKGTD------FNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGR 273
L+P+ C+ ++E+ + N+ V L S+ + GI + +++ R
Sbjct: 308 LIPRDCPGYLENVRKCLTQSMIESGFART-NIKHVALISASTGYGIEELITKLHSVWGTR 366
Query: 274 -DVYILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTL 321
DVY++G NVGKS NALL+ + A + QK S PGTT+
Sbjct: 367 GDVYLVGCTNVGKSTLFNALLRSDLCKVQATDLVQK--ATASPWPGTTI 413
>gi|390354295|ref|XP_782008.3| PREDICTED: nitric oxide-associated protein 1-like
[Strongylocentrotus purpuratus]
Length = 924
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 133/285 (46%), Gaps = 41/285 (14%)
Query: 67 LQKAKEAAKVVVRDSKKKRKK-----KDKVLKVNSAVAS--------CYGCGAPLQTSES 113
L+ +E+ ++ KKKR K + K +K+ + S C GCGA LQ ++
Sbjct: 360 LEDLEESVVSALKAVKKKRNKSQKPRRSKDMKIFGSEDSSIPVSEVPCSGCGAHLQCQDN 419
Query: 114 DAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYAGGKQFVSADELRE 173
PG+V + + F +C RC + H H V V D
Sbjct: 420 TQPGFVPSEKFTELDLSKPFSNSVCQRCFYIIHRHTALNVS-----------VPQDSYSN 468
Query: 174 KLSHLRR-EKALIVKLVDIVDFNGSFLARIRDLAGAN-PIILVVTKVDLLPKG--TDFNC 229
+ +R+ + +L++ +VD++DF S + ++DL G++ I++V K+D+LPK
Sbjct: 469 IIKAIRKNQSSLVILMVDLLDFPCSIIKNLKDLIGSSRSIVIVGNKLDVLPKDEPKQERR 528
Query: 230 VGDWVVEATTKKKL----NVLSVHLTSSKSLAGIVGVASEI--QKEKKGRDVYILGSANV 283
+ D +V A + V+ V L S+KS G+ + ++I K KKG DVY+LG+ANV
Sbjct: 529 LKDHLVSACVETGACDADKVMHVELISAKSGYGVENLITKILSLKTKKG-DVYLLGTANV 587
Query: 284 GKSAFINALLKKMGERDPAAAMAQKY--RPIQSAVPGTTLGPIQI 326
GKS N L E D A A R S PGTTL ++
Sbjct: 588 GKSTLFNRFL----ESDLCKAKASSLMGRATISQWPGTTLNLLRF 628
>gi|339253908|ref|XP_003372177.1| conserved hypothetical protein [Trichinella spiralis]
gi|316967454|gb|EFV51878.1| conserved hypothetical protein [Trichinella spiralis]
Length = 1051
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 115/451 (25%), Positives = 183/451 (40%), Gaps = 106/451 (23%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGAP +S PG++ ++ Q +LC RC LL + + V
Sbjct: 614 CSGCGAPFHCIDSSLPGFLPQKIFDTLYSE-QMTQLLCRRCHLLKEHNFLINVT------ 666
Query: 161 GGKQFVSADELREKLSHLR-REKALIVKLVDIVDFNGSFLARIRDLAGAN-PIILVVTKV 218
VS+ + LSHLR ++ LIV +VD++DF S L + DL G+N +I+V KV
Sbjct: 667 -----VSSANYEKILSHLRIYQEVLIVLIVDLLDFPCSLLKSLPDLLGSNKSMIVVANKV 721
Query: 219 DLLPKGTD-FNCVGDWVVEATTK------------KKLNVLSVHLTSSKSLAGIVGVASE 265
DLL D FN VE T K NV+ + S+K+ G+ + S
Sbjct: 722 DLLSSNLDQFN------VEKTEKMLFEHLKDIGFCDHFNVMHTAVISAKTGWGVEKLISF 775
Query: 266 IQKE--KKGRDVYILG----SANVGKSAFINALLKKMGE-------RDPAAAMAQKYRPI 312
IQ++ KG + +L + + A A L++M R A A++ I
Sbjct: 776 IQRKWGVKGTTLNLLKFPVLNPTARRLAIREARLRRMKRFVSQLKARQANARSAKRQYNI 835
Query: 313 QSAVPGTT------------LGPIQIDA------------FLGGGKLYDTPGVHLHHRQA 348
+ + LG + D+ F G +DTPG +
Sbjct: 836 LNGYMDMSFKGDEENKLFDGLGSAKDDSRKKEIWNPDHPDFKNGKWCFDTPGTVNSDQII 895
Query: 349 AVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRIDLLKVLPE 408
++ ++L P++ L+ + + + E ++ GGL R+D L P
Sbjct: 896 NLLTLQELVYTIPRAVLKPRKYCIYPE--------------MSLLVGGLARLDSLNDTPC 941
Query: 409 TCLTFYGPKSLQVYMVPTDKADEFYQKELGV-TLTPPIGKQKAEGWKGLDRERLL----- 462
T L Y L ++++ T EFY++ +G L P G + ERL
Sbjct: 942 TILA-YASDYLPMFVLKTGDVGEFYKRNVGTDVLKVPCGSSE---------ERLAVFPPL 991
Query: 463 ---EIKFEDTER---PASDVAISGLGWISVE 487
I F ++ + DV +S +GWISV+
Sbjct: 992 LPKVINFAESNKNFHERMDVVLSSVGWISVK 1022
>gi|224057138|ref|XP_002299138.1| predicted protein [Populus trichocarpa]
gi|222846396|gb|EEE83943.1| predicted protein [Populus trichocarpa]
Length = 609
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 137/281 (48%), Gaps = 18/281 (6%)
Query: 211 IILVVTKVDLLPKGTDFNCVGDWVVEATTKKKLNVLS-VHLTSSKSLAGIVGVASEIQKE 269
I+LVVTK+DLLP WV + +V+ VHL SS G+ +A ++ +
Sbjct: 256 IVLVVTKIDLLPSSLSPLGFEQWVRRRAREGGASVIKKVHLVSSVRNWGLKNLAEDVIEL 315
Query: 270 KKGR-DVYILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDA 328
R V+ +G+ N GKS +NA+ K +G + + ++ VPGTTLG ++++
Sbjct: 316 AGARGHVWAVGAQNAGKSTLLNAMAKCVGGNERKVSYL-----TEAPVPGTTLGIVRVEG 370
Query: 329 FL-GGGKLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAV-ISETETNNEFKSHG 386
L G KL+DTPG+ + ++ E+ + L+ +++ + +S E E
Sbjct: 371 VLPGQAKLFDTPGLLNPQQITTRLNREEQRLVHISKELKPRTYRIKVSFLELRPE----- 425
Query: 387 LNGFTIFWGGLVRIDLLKVLPETC-LTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPI 445
G ++ GGL+R+D++++ ++ ++ + L ++M T+ + G L PPI
Sbjct: 426 --GHSVHIGGLMRLDIVELSVDSLYVSVWASPYLPLHMGKTENVSTMVEDHFGRQLQPPI 483
Query: 446 GKQKAEGWKGLDRERLLEIKFEDTERPASDVAISGLGWISV 486
G ++ + R+ + + + DVA +GLGW +
Sbjct: 484 GDKRVKDLGKWVRQE-FRVSGNRWDSSSVDVAAAGLGWFGI 523
>gi|195335495|ref|XP_002034399.1| GM21850 [Drosophila sechellia]
gi|194126369|gb|EDW48412.1| GM21850 [Drosophila sechellia]
Length = 624
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 114/230 (49%), Gaps = 24/230 (10%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA L S + PGY+ + + + + +T+ C RC L+ ++ V
Sbjct: 109 CNGCGADLHCSNASLPGYIPSEIFR-GRTQQELQTITCKRCHFLNQYNIALDVE------ 161
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGA-NPIILVVTKVD 219
V+ + +S ++ + AL + LVD++DF S ++++ GA P+ LV KVD
Sbjct: 162 -----VAPSTYVDTISRIQDKFALAIVLVDLLDFPCSIWPGMQNILGAKRPVFLVGNKVD 216
Query: 220 LLPKGTDF------NCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQK--EKK 271
LLP+ ++ + + ++ LN+ +V L S+K+ GI + +++ K K
Sbjct: 217 LLPRDSNIYLQHIKDSLQREFIKHGGGDGLNIKNVSLISAKTGYGIEELITQLHKTWAYK 276
Query: 272 GRDVYILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTL 321
G DVY++G NVGKS+ N LL R A+ + +K PGTTL
Sbjct: 277 G-DVYLVGCTNVGKSSLFNILLNSDYCRPEASDLVRK--ATTCPWPGTTL 323
Score = 43.9 bits (102), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 86/198 (43%), Gaps = 36/198 (18%)
Query: 302 AAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPGVHLHHRQAAVVHAEDLPALAP 361
A AMA RPI TTL D + +YDTPGV + + ++ AE+L L P
Sbjct: 391 AFAMAGGSRPI------TTLNDRHKD-YKEARWVYDTPGVMQPDQISPLLTAEELVKLQP 443
Query: 362 QSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRIDLLKVL-PETCLTF-----YG 415
+ +R ++F + + +I GGL R+DLL++ P + +
Sbjct: 444 ATMIRPRAFRLRPQ--------------MSILLGGLARLDLLEIRSPRKHFDWLKVFVFA 489
Query: 416 PKSLQVYMVPTDKADEFYQKELGVT-LTPPIGKQKAEG----WKGL---DRERLLEIKFE 467
+ L + + T+ A+ Y++ +G L P + E W GL D + +L +
Sbjct: 490 SEHLPIMIADTEAAESVYKRYVGSPFLGVPFASEDLEARLRRWPGLQCKDGDIVLASQGR 549
Query: 468 DT-ERPASDVAISGLGWI 484
+ R D+ +S GW+
Sbjct: 550 NEGTRLNCDITLSSAGWM 567
>gi|345478814|ref|XP_001599126.2| PREDICTED: uncharacterized protein C4orf14 homolog [Nasonia
vitripennis]
Length = 761
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 80/240 (33%), Positives = 117/240 (48%), Gaps = 28/240 (11%)
Query: 95 NSAVAS--CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITA 152
N+ V+S C GCGA L + PGY+ P L K ++V C RC + + H
Sbjct: 239 NADVSSVPCGGCGALLHCKDVAIPGYL-PSELFLNKTIADLRSVTCQRCHFMKNYHTCLD 297
Query: 153 VGGNGGYAGGKQFVSADE---LREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGAN 209
V VS DE L EK++ RR A+++ LVD+ DF S ++ ++ G
Sbjct: 298 VR-----------VSPDEYPKLLEKINDNRR--AIVILLVDLTDFPCSIWPKLPEVIGTK 344
Query: 210 PIILVV-TKVDLLPKGTDF--NCVGDWVVEATTK---KKLNVLSVHLTSSKSLAGIVGVA 263
+ VV K+DLLPK + + V D + E+ + K N+ V L S+K+ GI +
Sbjct: 345 RHVYVVGNKIDLLPKDSTLFLDHVKDSLTESLIEIGLTKTNIKHVGLISAKTGYGIEQLI 404
Query: 264 SEIQKEKKGR-DVYILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLG 322
+++ K + R DVYI+G N GKS N LL+ + A + Q R S PGTTL
Sbjct: 405 NKLYKVWQYRSDVYIVGCTNAGKSTLFNTLLQSDFCKSQAVDLIQ--RATTSPWPGTTLN 462
>gi|194880981|ref|XP_001974627.1| GG21848 [Drosophila erecta]
gi|190657814|gb|EDV55027.1| GG21848 [Drosophila erecta]
Length = 623
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 112/230 (48%), Gaps = 24/230 (10%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA L S + PGY+ + + + + +T+ C RC L+H ++ V
Sbjct: 109 CNGCGANLHCSNASLPGYIPSEIFR-GRTQQELQTISCKRCHFLNHYNIALDVE------ 161
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGA-NPIILVVTKVD 219
V+ + +S ++ + AL + LVD++DF S ++ + G P+ LV KVD
Sbjct: 162 -----VAPSTYVDTISRIQDKFALAIVLVDLLDFPCSIWPGMQHILGTKRPVFLVGNKVD 216
Query: 220 LLPKGTD--FNCVGDWVVEATTK----KKLNVLSVHLTSSKSLAGIVGVASEIQK--EKK 271
LLP+ ++ + D + K LN+ ++ L S+K+ GI + +++ K K
Sbjct: 217 LLPRDSNIYLQHIKDSLQREFIKHGGGDGLNIKNISLISAKTGYGIEELITQLHKTWAYK 276
Query: 272 GRDVYILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTL 321
G DVY+LG NVGKS+ N LL R A + +K PGTTL
Sbjct: 277 G-DVYLLGCTNVGKSSLFNILLNSDYCRPEATDLVRK--ATACPWPGTTL 323
Score = 46.2 bits (108), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 100/245 (40%), Gaps = 35/245 (14%)
Query: 254 KSLAGIVGVASEIQKEKKGRDVYILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQ 313
K L + ++KE++ +A A + + + + A AMA RPI
Sbjct: 343 KRLVSERSARAAMEKERRAVARETGSAAAAQPVASVGRTFDRREDVNDAFAMAAGSRPI- 401
Query: 314 SAVPGTTLGPIQIDAFLGGGKLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVI 373
TTL Q + +YDTPGV + + ++ AE+L L P + +R ++F +
Sbjct: 402 -----TTLNH-QHKEYKQARWVYDTPGVMQPDQISPLLTAEELVKLQPTTMIRPRTFRLR 455
Query: 374 SETETNNEFKSHGLNGFTIFWGGLVRIDLLKVL-PETCLTF-----YGPKSLQVYMVPTD 427
+ +I GGL R+DLL + P + + + L + + +
Sbjct: 456 PQ--------------MSILLGGLARLDLLDITSPRKQYDWLKVFVFASEHLPILIADSQ 501
Query: 428 KADEFYQKELGVT-LTPPIGKQKAEG----WKGL---DRERLLEIKFEDTERPASDVAIS 479
A+ Y++ +G L P + E W GL D + +L + + R D+ +S
Sbjct: 502 AAESVYKRYVGSPFLGVPFASEDLEARLRRWPGLQCRDEDIVLASEERNEGRLNCDITLS 561
Query: 480 GLGWI 484
GW+
Sbjct: 562 SAGWM 566
>gi|328773495|gb|EGF83532.1| hypothetical protein BATDEDRAFT_85971 [Batrachochytrium
dendrobatidis JAM81]
Length = 496
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 104/470 (22%), Positives = 171/470 (36%), Gaps = 101/470 (21%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKK-----------------HHQFKTVL------ 137
C GCGA Q + GY+ Y K Q KT++
Sbjct: 63 CVGCGAAFQHHSPISAGYIPELAYSRKASITPAAIAKLKDSIEPLSPSQVKTLINASKEE 122
Query: 138 -----CGRCRLLSHGHMITAVGGNGGYAGGKQFVSADELREKLSHLR-REKALIVKLVDI 191
C RC L H + + + + + L+ R L+V +VD+
Sbjct: 123 KVVPICQRCHNLKH------------HNKSQVPATFSTVHSQFKSLKTRTGGLVVLIVDV 170
Query: 192 VDFNGSFLARIRDLAGANPIILVVTKVDLLPKGTDFNCVGDWV-VEATTKKKLNVLSVHL 250
D + L +RDL G +I+ + K+DL+PK DWV T + +S+
Sbjct: 171 YDLPCTLLPNLRDLVGMKNVIVAINKIDLIPKKDTPKQYIDWVRSRIQTSRHTGPISIIP 230
Query: 251 TSSKSLAGIVG-VASEIQKEKKGRDVYILGSANVGKSAFINALLKKMGER-----DPAAA 304
S+ GI V + + D+Y++G+ NVGKS+ IN ++ G + A
Sbjct: 231 ISATKGTGIDSLVKAIVDNRNSNEDIYMVGATNVGKSSVINQIVTHAGYKGFLTTSNFAG 290
Query: 305 MAQKYRPIQSAVPGTTLGPIQI--------DAFLGGGKLYDTPGVHLHHRQAAVVHAEDL 356
PI + GT P + DA G L DT G + + + + +
Sbjct: 291 TTIAPVPIPISSFGTQFFPNSLGDISDPDHDARKDTGHLIDTVGTYNSQQLTHFLASTEF 350
Query: 357 PALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRIDLLKVLPETCLTFYGP 416
+ P++ +R + K + G I++G LVR++++K + FYG
Sbjct: 351 QFVVPKTSIRPR--------------KVNLRPGKNIWFGALVRLEIVKTKTASSFWFYGC 396
Query: 417 KSLQVYMVPTDKADEFYQKELGVT---LTPPIGKQKAEGWKGLDRERLLEIKFEDTERPA 473
L ++ + + + G+ +TPP GK + L R
Sbjct: 397 HVLPIHGCRESRMASLWDEHAGINSQIMTPPYGKDRINA--------LPPFAIASESRYN 448
Query: 474 SD---VAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVEVF 520
D + + GLGWI + GELH V P V ++
Sbjct: 449 KDGTRIWLGGLGWIVMY-----------------GELHFRVWTPGGVGIY 481
>gi|297809289|ref|XP_002872528.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297318365|gb|EFH48787.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 597
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 113/499 (22%), Positives = 201/499 (40%), Gaps = 118/499 (23%)
Query: 97 AVASCYGCGAPLQTSESDAPGY------------------------------------VD 120
++ C GCG +Q S PG+ ++
Sbjct: 80 TISVCPGCGVHMQNSNPKHPGFFIKPSTEKQRNDLNLRNLVPISQEPEFIDSIKRGFIIE 139
Query: 121 P-DTYELKKKHHQ-----FKTVLCGRCRLLSH-GHMITAVGGN------GGYAGGKQFVS 167
P ++ +L K H+ + ++C RC L H G + N + G++ S
Sbjct: 140 PINSSDLNPKDHEETDQDSRPLVCARCHSLRHYGKVKDPTVENLLPDFDFDHTVGRRLGS 199
Query: 168 ADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDL----------------AGANP- 210
A R +++ +VD DF+GSF R+ L +G P
Sbjct: 200 ASGAR----------TVVLMVVDASDFDGSFPKRVAKLVSRTIDENNMAWKEGKSGNVPR 249
Query: 211 IILVVTKVDLLPKGTDFNCVGDWVVEATTKKKLN-VLSVHLTSSKSLAGIVGVASEIQKE 269
+++VVTK+DLLP WV + L+ + +H S GI + ++
Sbjct: 250 VVVVVTKIDLLPSSLSPTRFEHWVRLRAREGGLSKITKLHFVSPIKNWGIKDLVEDVAAM 309
Query: 270 KKGR-DVYILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDA 328
R V+ +GS N GKS INA+ K +G + + ++ VPGTTLG I+I+
Sbjct: 310 AGKRGHVWAVGSQNAGKSTLINAVGKVVG--------GKVWHLTEAPVPGTTLGIIRIEG 361
Query: 329 FLG-GGKLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGL 387
L KL+DTPG+ H+ + E+ + L+ +++ +
Sbjct: 362 VLPFEAKLFDTPGLLNPHQITTRLTREEQRLVHISKELKPRTYRI--------------K 407
Query: 388 NGFTIFWGGLVRIDLLKVLPETC-LTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIG 446
G+T+ GGL+R+D+ + ++ +T + + ++M + A + + G L PPIG
Sbjct: 408 EGYTVHIGGLMRLDIDESSVDSLYVTVWASPYVPLHMGKKENAYKTLEDHFGCRLQPPIG 467
Query: 447 KQKAEGWKGLDRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGE 506
+++ E R+ + + + D+A+SGLGW ++ GE
Sbjct: 468 EKRVEELGKWVRKE-FRVSGSSWDTSSVDIAVSGLGWFAI---------------GLKGE 511
Query: 507 LHLAVHVPKPVEVFVRNPM 525
L V + ++VF R+ +
Sbjct: 512 AILGVWTHEGIDVFCRDSL 530
>gi|4539440|emb|CAB40028.1| putative protein [Arabidopsis thaliana]
gi|7267759|emb|CAB78185.1| putative protein [Arabidopsis thaliana]
Length = 605
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 107/458 (23%), Positives = 188/458 (41%), Gaps = 93/458 (20%)
Query: 97 AVASCYGCGAPLQTSESDAPGY-VDPDTYELKK-----------KHHQF----------- 133
++ C GCG +Q S PG+ + P T + + + +F
Sbjct: 82 TISVCPGCGVHMQNSNPKHPGFFIKPSTEKQRNDLNLRDLTPISQEPEFIDSIKRGFIIE 141
Query: 134 -----------------KTVLCGRCRLLSH-GHMITAVGGN------GGYAGGKQFVSAD 169
+ ++C RC L H G + N + G++ SA
Sbjct: 142 PISSSDLNPRDDEPSDSRPLVCARCHSLRHYGRVKDPTVENLLPDFDFDHTVGRRLGSAS 201
Query: 170 ELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDL----------------AGANP-II 212
R +++ +VD DF+GSF R+ L +G P ++
Sbjct: 202 GAR----------TVVLMVVDASDFDGSFPKRVAKLVSRTIDENNMAWKEGKSGNVPRVV 251
Query: 213 LVVTKVDLLPKGTDFNCVGDWV-VEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKK 271
+VVTK+DLLP N WV + A + +H S GI + ++
Sbjct: 252 VVVTKIDLLPSSLSPNRFEQWVRLRAREGGLSKITKLHFVSPVKNWGIKDLVEDVAAMAG 311
Query: 272 GR-DVYILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFL 330
R V+ +GS N GKS INA+ K +G + + ++ VPGTTLG I+I+ L
Sbjct: 312 KRGHVWAVGSQNAGKSTLINAVGKVVG--------GKVWHLTEAPVPGTTLGIIRIEGVL 363
Query: 331 G-GGKLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNG 389
KL+DTPG+ H+ + E+ + L+ +++ + F G
Sbjct: 364 PFEAKLFDTPGLLNPHQITTRLTREEQRLVHISKELKPRTYRI------KVWFNIIECEG 417
Query: 390 FTIFWGGLVRIDLLKVLPETC-LTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQ 448
+T+ GGL+R+D+ + ++ +T + + ++M + A + + G L PPIG++
Sbjct: 418 YTVHIGGLMRLDIDEASVDSLYVTVWASPYVPLHMGKKENAYKTLEDHFGCRLQPPIGEK 477
Query: 449 KAEGWKGLDRERLLEIKFEDTERPASDVAISGLGWISV 486
+ E R+ + + + D+A+SGLGW ++
Sbjct: 478 RVEELGKWVRKE-FRVSGTSWDTSSVDIAVSGLGWFAL 514
>gi|56808383|ref|ZP_00366137.1| COG1161: Predicted GTPases [Streptococcus pyogenes M49 591]
Length = 214
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 104/219 (47%), Gaps = 34/219 (15%)
Query: 270 KKGRDVYILGSANVGKSAFINALLKKM-GERDPAAAMAQKYRPIQSAVPGTTLGPIQIDA 328
+ GRDVY++G NVGKS INA+++++ G +D S PGTTL I+I
Sbjct: 3 RNGRDVYVVGVTNVGKSTLINAIIQEITGNKDVITT---------SRFPGTTLDKIEI-P 52
Query: 329 FLGGGKLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLN 388
G ++DTPG+ H+ A + ++L ++P+ ++ +++ + E
Sbjct: 53 LDDGTFIFDTPGIIHRHQMAHYLSPKELKIVSPKKEIKPKTYQLNPEQ------------ 100
Query: 389 GFTIFWGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQ 448
T+F GGL R D + + F+ L+++ AD FY K +G LTPP K+
Sbjct: 101 --TLFLGGLSRFDFINGERQGFTAFFD-NQLELHRTKLAGADAFYDKHVGTLLTPPDKKE 157
Query: 449 KAEGWKGLDRERLLEIKFEDTERPASDVAISGLGWISVE 487
K + E ++ K D+ SGLGWI V
Sbjct: 158 LTAFPKLVRHEFTIDQKM--------DIVFSGLGWIRVN 188
>gi|18413362|ref|NP_567364.1| GTPase YqeH-like protein [Arabidopsis thaliana]
gi|4115915|gb|AAD03426.1| contains similarity to Helix pomatia br-1 protein (GB: X96994)
[Arabidopsis thaliana]
gi|15293099|gb|AAK93660.1| unknown protein [Arabidopsis thaliana]
gi|21281233|gb|AAM45035.1| unknown protein [Arabidopsis thaliana]
gi|332657510|gb|AEE82910.1| GTPase YqeH-like protein [Arabidopsis thaliana]
Length = 597
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 106/458 (23%), Positives = 188/458 (41%), Gaps = 101/458 (22%)
Query: 97 AVASCYGCGAPLQTSESDAPGY-VDPDTYELKK-----------KHHQF----------- 133
++ C GCG +Q S PG+ + P T + + + +F
Sbjct: 82 TISVCPGCGVHMQNSNPKHPGFFIKPSTEKQRNDLNLRDLTPISQEPEFIDSIKRGFIIE 141
Query: 134 -----------------KTVLCGRCRLLSH-GHMITAVGGN------GGYAGGKQFVSAD 169
+ ++C RC L H G + N + G++ SA
Sbjct: 142 PISSSDLNPRDDEPSDSRPLVCARCHSLRHYGRVKDPTVENLLPDFDFDHTVGRRLGSAS 201
Query: 170 ELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDL----------------AGANP-II 212
R +++ +VD DF+GSF R+ L +G P ++
Sbjct: 202 GAR----------TVVLMVVDASDFDGSFPKRVAKLVSRTIDENNMAWKEGKSGNVPRVV 251
Query: 213 LVVTKVDLLPKGTDFNCVGDWVVEATTKKKLN-VLSVHLTSSKSLAGIVGVASEIQKEKK 271
+VVTK+DLLP N WV + L+ + +H S GI + ++
Sbjct: 252 VVVTKIDLLPSSLSPNRFEQWVRLRAREGGLSKITKLHFVSPVKNWGIKDLVEDVAAMAG 311
Query: 272 GR-DVYILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFL 330
R V+ +GS N GKS INA+ K +G + + ++ VPGTTLG I+I+ L
Sbjct: 312 KRGHVWAVGSQNAGKSTLINAVGKVVG--------GKVWHLTEAPVPGTTLGIIRIEGVL 363
Query: 331 G-GGKLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNG 389
KL+DTPG+ H+ + E+ + L+ +++ + G
Sbjct: 364 PFEAKLFDTPGLLNPHQITTRLTREEQRLVHISKELKPRTYRI--------------KEG 409
Query: 390 FTIFWGGLVRIDLLKVLPETC-LTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQ 448
+T+ GGL+R+D+ + ++ +T + + ++M + A + + G L PPIG++
Sbjct: 410 YTVHIGGLMRLDIDEASVDSLYVTVWASPYVPLHMGKKENAYKTLEDHFGCRLQPPIGEK 469
Query: 449 KAEGWKGLDRERLLEIKFEDTERPASDVAISGLGWISV 486
+ E R+ + + + D+A+SGLGW ++
Sbjct: 470 RVEELGKWVRKE-FRVSGTSWDTSSVDIAVSGLGWFAL 506
>gi|242021419|ref|XP_002431142.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212516391|gb|EEB18404.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 528
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/230 (31%), Positives = 118/230 (51%), Gaps = 20/230 (8%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA LQ S PG++ P + KK + + +C RC L+ ++ A+G N
Sbjct: 16 CGGCGALLQCSSEREPGFL-PKELFVNKKAKKLRGEICQRCYFLNEYNI--ALGVN---- 68
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
V +E + +S ++ +KAL++ +VD++DF S I L G N ++LV K+DL
Sbjct: 69 -----VMPEEYQFIVSQIKNKKALVILMVDLLDFPCSIWPGIDKLIGDNNVVLVGNKIDL 123
Query: 221 LPKGTDFNC-VGDWVVEATTKKKLN--VLSVHLTSSKSLAGIVGVASEIQKE--KKGRDV 275
+ F + + + E K+ L +L + L S+K+ G+ + + + K KG D+
Sbjct: 124 FYQEKKFETQMLNSLKEELKKENLQSKILDIQLISAKTGYGVEKLINFLGKVWGTKG-DM 182
Query: 276 YILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQ 325
Y++G NVGKS N LLK R A + +R S+ PGTTL ++
Sbjct: 183 YLVGCTNVGKSTLFNILLKSDLCR--IEADNKLHRATISSWPGTTLNLLK 230
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 68/154 (44%), Gaps = 17/154 (11%)
Query: 335 LYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFW 394
YDTPGV ++ ++ ++L P++ + + F H +G ++F
Sbjct: 329 FYDTPGVVQKNQLINLLTTQELSITLPKTVVTPRIF--------------HLKSGTSLFI 374
Query: 395 GGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTL--TPPIGKQKAEG 452
GGL R+D + + L + L V + + A++ Y LG L P G +
Sbjct: 375 GGLARLDFVSGVNSIWLCVFASSELPVTITSIENAEDVYNTLLGSNLFKVPCGGDDRLSK 434
Query: 453 WKGLDRERLLEIKFEDTERPASDVAISGLGWISV 486
W L E+ EI + + ++DV +S GW+S+
Sbjct: 435 WPELSSEK-FEIVGKYPDEASADVVLSSAGWVSI 467
>gi|328776445|ref|XP_396974.4| PREDICTED: uncharacterized protein C4orf14-like [Apis mellifera]
Length = 546
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 115/238 (48%), Gaps = 25/238 (10%)
Query: 95 NSAVAS--CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITA 152
+S V+S C GCGA L + + PGY+ + + K + K+ +C RC L +
Sbjct: 144 DSEVSSIPCGGCGALLHCKDPEIPGYLPLELFS--KNNEDLKSTICQRCHFLKFYNSALE 201
Query: 153 VGGNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGA-NPI 211
V VS ++ L ++ +K I+ +VD+ DF S ++ + PI
Sbjct: 202 VK-----------VSIEDYPNLLKVIKTKKCAIILIVDLTDFPCSIWPDLKTIMHPFTPI 250
Query: 212 ILVVTKVDLLPKGT-DF-----NCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASE 265
LV KVDLLP+ + F + + VV+ T KK N+ V L S+K+ GI + ++
Sbjct: 251 FLVGNKVDLLPRDSPKFLENIKQLLTNTVVQVTGVKKENITHVQLISAKTGYGIEQLINK 310
Query: 266 IQKEKKGR-DVYILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLG 322
+Q + + + DVY++G NVGKS+ N LL + A + Q S PGTTL
Sbjct: 311 LQYKWRYKGDVYLVGCTNVGKSSLFNTLLNSDYCKVKAIDLVQ--CATVSTWPGTTLN 366
>gi|256383799|gb|ACU78369.1| ribosome biogenesis GTPase YqeH [Mycoplasma mycoides subsp. capri
str. GM12]
gi|256384629|gb|ACU79198.1| ribosome biogenesis GTPase YqeH [Mycoplasma mycoides subsp. capri
str. GM12]
gi|296455327|gb|ADH21562.1| ribosome biogenesis GTPase YqeH [synthetic Mycoplasma mycoides
JCVI-syn1.0]
Length = 367
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 91/393 (23%), Positives = 171/393 (43%), Gaps = 60/393 (15%)
Query: 98 VASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRC-RLLSHGHMITAVGGN 156
+ SC GCG+ LQT GYV+ DT H + C RC ++ ++ ++ +
Sbjct: 1 MKSCLGCGSLLQTINKFEQGYVN-DT------EHAY----CLRCFKIKNYNQLVDSE--- 46
Query: 157 GGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVT 216
+QF+ +++ ++ + + ++DI D GS + I L +ILVV
Sbjct: 47 ---INDQQFI--NKISALVNENKNNDLVFYYVLDIFDLFGSRILEIESLIKDFKVILVVN 101
Query: 217 KVDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVY 276
K+DLLPK + +++ L L + LTS+ + + + +++ K K + Y
Sbjct: 102 KIDLLPKSIKLEKIRNYINNVFKTSCLKNLEIFLTSANKINLVEPLLNKVIKNNKNQQ-Y 160
Query: 277 ILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLG--PIQIDAFLGGGK 334
+G++NVGKS+ IN +L ++ + P+ +++ + TTL IQ+D
Sbjct: 161 FIGASNVGKSSLINKML-EINQLIPSIIVSKYF--------NTTLDFIEIQLDT---NTT 208
Query: 335 LYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFW 394
++D+ GV + A +++ R QS+ + +F +IF+
Sbjct: 209 IFDSAGVSRKNSIANLMNK------------RFQSYCYFKKEIQ--QFTYQLTANNSIFF 254
Query: 395 GGLVRIDLLKVLP-ETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGW 453
G+ D L +T Y K + ++ T ++ L P I
Sbjct: 255 SGVCWFDYLSSSSKKTNFHIYTNKEINLHRTNTKNVIRYWNNNRK-NLIPYISNS----- 308
Query: 454 KGLDRERLLEIKF-EDTERPASDVAISGLGWIS 485
++ ++ E KF ++ D++ISGLGWI+
Sbjct: 309 ---EKIQVYEFKFTKEHLNNWYDISISGLGWIN 338
>gi|414868350|tpg|DAA46907.1| TPA: hypothetical protein ZEAMMB73_094953 [Zea mays]
Length = 791
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/55 (74%), Positives = 48/55 (87%)
Query: 279 GSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGG 333
GS NVGKSAFI+A+L+ M +DP AA AQKY+PIQS VPGTTLGPIQI++FLGGG
Sbjct: 163 GSTNVGKSAFISAMLRTMAYKDPVAATAQKYKPIQSVVPGTTLGPIQIESFLGGG 217
>gi|283768325|ref|ZP_06341237.1| putative ribosome biogenesis GTPase YqeH [Bulleidia extructa W1219]
gi|283104717|gb|EFC06089.1| putative ribosome biogenesis GTPase YqeH [Bulleidia extructa W1219]
Length = 348
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 103/426 (24%), Positives = 168/426 (39%), Gaps = 82/426 (19%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG LQ +D GY P + + C RC L H + Y+
Sbjct: 3 CVGCGVELQYDAADEVGY-SPKK----------EALYCQRCFRLRHY-------DDPVYS 44
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
K+F + R L ++ ++ ++V ++D S I+LV+TK D+
Sbjct: 45 --KRF--GIDPRLVLQGIQNQEGVLVLVMDCFAIEESLEQPFLQEFSGREILLVLTKRDI 100
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LP + + VV+ KKL + V S K G + + + + G + +G
Sbjct: 101 LPAEIEEEKIVKMVVKKIRSKKLPIQQVFFHSVKLNLGNEELINYLYQYPLGTNFIFMGL 160
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
AN GKS+ +N LL E D A S PGTTL ++ G DTPG
Sbjct: 161 ANAGKSSLLNQLL----EMDTLTA---------SCYPGTTLSFSKLRK--DGYTFIDTPG 205
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ + V DL + P L +++ + S + F G L R+
Sbjct: 206 MEIRASYVMEVSESDLKKVLPNKTLVARNYQLYSPQ--------------SYFIGALFRM 251
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
DL TFY L+++ ++A++ Y+++ G L P + K +E ER
Sbjct: 252 DLTPT-ERASATFYFHDQLKIHRTKLEQANDLYRRQKGKDLKPCLTKDLSE-------ER 303
Query: 461 LLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELH-LAVHVPKPVEV 519
+E + D+ + GLGWI + SG + +++PK +EV
Sbjct: 304 NVE-----KGKDKVDIVLPGLGWICL-----------------SGHFQEIKLYLPKGIEV 341
Query: 520 FVRNPM 525
+ R +
Sbjct: 342 YTRKAI 347
>gi|193613019|ref|XP_001952820.1| PREDICTED: uncharacterized protein C4orf14 homolog [Acyrthosiphon
pisum]
Length = 689
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 109/231 (47%), Gaps = 29/231 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA L S PGY+ P +T++C RC + + AV
Sbjct: 178 CGGCGALLHCQNSSIPGYL-PSELFCHCGPEDLRTMICQRCHFIQKYNTALAVQ------ 230
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGAN-PIILVVTKVD 219
V E + L +++++ALI+ +VD+ DF S + + G N P+++V K+D
Sbjct: 231 -----VDPVEYPKLLYPIKKKRALIILMVDLTDFPCSIWPNLMECIGINKPVVVVGNKLD 285
Query: 220 LLPKGTDFNCVGDWVVEA------TTKKKLNVLSVHLTSSKSLAGIVGVASEIQK--EKK 271
LLP DF WV A + K +N+ V + S+K+ GI + +++ + K
Sbjct: 286 LLPG--DF---PGWVEHAKKSLAQSIPKDINIKHVTVVSAKTGFGIEELINKLHSLWQTK 340
Query: 272 GRDVYILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLG 322
G DVY++G NVGKS N LL+ + A + Q R S PGTTL
Sbjct: 341 G-DVYLIGCTNVGKSTMFNTLLQSDYCKVKAVDLVQ--RATTSPWPGTTLN 388
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 97/209 (46%), Gaps = 22/209 (10%)
Query: 285 KSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGK-LYDTPGVHL 343
K + I+ ++++ E DP A K + V +TLG + + K +YDTPGV
Sbjct: 450 KQSSIDDIVRQ-NETDPFTTNAVKVN--TNRVTSSTLGFDENEPQFKNSKFMYDTPGVVH 506
Query: 344 HHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRIDLL 403
+ ++ E+L P + ++ ++F++ T+F GGL RID L
Sbjct: 507 PDQSINLLTTEELMMTLPTTVMKPRTFSLRPLQ--------------TLFVGGLGRIDCL 552
Query: 404 KVLPETC-LTFYGPKSLQVYMVPTDKADEFYQKELGV-TLTPPIGK-QKAEGWKGLDR-E 459
K + T + +L + + ++ ADE Y+K LG L P G ++ W GL +
Sbjct: 553 KTGAKFVRFTVFSAHTLPITVCNSEDADEVYEKLLGTHLLAVPCGSIERLSKWPGLSSYK 612
Query: 460 RLLEIKFEDTERPASDVAISGLGWISVEP 488
+++ + + +D+ +S GW++V P
Sbjct: 613 NPIQLTGINEKTSCADIVLSSAGWVAVTP 641
>gi|42561081|ref|NP_975532.1| GTPase [Mycoplasma mycoides subsp. mycoides SC str. PG1]
gi|42492578|emb|CAE77174.1| Conserved hypothetical GTPase of unknown function [Mycoplasma
mycoides subsp. mycoides SC str. PG1]
gi|301320975|gb|ADK69618.1| ribosome biogenesis GTPase YqeH [Mycoplasma mycoides subsp.
mycoides SC str. Gladysdale]
Length = 367
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 95/397 (23%), Positives = 172/397 (43%), Gaps = 68/397 (17%)
Query: 98 VASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRC-RLLSHGHMITAVGGN 156
+ SC GCG+ LQT GYV+ DT H + C RC ++ ++ ++ +
Sbjct: 1 MKSCLGCGSLLQTINKFEQGYVN-DT------EHAY----CLRCFKIKNYNQLVDSE--- 46
Query: 157 GGYAGGKQFVSADELREKLSHLRREKA----LIVKLVDIVDFNGSFLARIRDLAGANPII 212
+QF++ K+S L E + ++DI D GS + I +L +I
Sbjct: 47 ---INDQQFIN------KISTLVNENKNNGLVFYYVLDIFDLFGSRILEIENLIKDFKVI 97
Query: 213 LVVTKVDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKG 272
LVV K+DLLPK + +++ L L + LTS+ + + + +++ K K
Sbjct: 98 LVVNKIDLLPKSIKLEKIRNYINNVFKTGCLKNLEIFLTSADRINLVEPLLNKVIKNNKN 157
Query: 273 RDVYILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLG--PIQIDAFL 330
+ Y +G++NVGKS+ IN +L ++ + P+ +++ + TTL IQ+D
Sbjct: 158 QQ-YFIGASNVGKSSLINKML-EINQLIPSIVVSKYF--------NTTLDFIEIQLDT-- 205
Query: 331 GGGKLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGF 390
++D+ GV + A +++ R QS+ + +F
Sbjct: 206 -NTTIFDSAGVSRKNSIANLMNK------------RFQSYCYFKKEIQ--QFTYQLTPNN 250
Query: 391 TIFWGGLVRIDLLKVLPE-TCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQK 449
+IF+ G+ D L + T Y K + ++ T ++ L P I
Sbjct: 251 SIFFSGVCWFDYLSSSNQKTNFHIYTNKEINLHRTNTKNVIRYWNNNRK-NLIPYINNS- 308
Query: 450 AEGWKGLDRERLLEIKF-EDTERPASDVAISGLGWIS 485
++ ++ E KF ++ D++ISGLGWI+
Sbjct: 309 -------EKIQVYEFKFTKEHLNNWYDISISGLGWIN 338
>gi|282855625|ref|ZP_06264939.1| conserved hypothetical protein [Pyramidobacter piscolens W5455]
gi|282586555|gb|EFB91809.1| conserved hypothetical protein [Pyramidobacter piscolens W5455]
Length = 377
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 97/397 (24%), Positives = 163/397 (41%), Gaps = 74/397 (18%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA Q+ + + PGY+ P + + VLC RC + H Y
Sbjct: 7 CPGCGAVFQSVDENLPGYLVPG-------KNPDEGVLCKRCFQMKH------------YG 47
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGAN----PIILVVT 216
++ + AD +K +R L ++D + ++ + DL A P+ ++
Sbjct: 48 VYRKALLADAGIQK--DIRAHALGAAALFLVLDVSRPEIS-LPDLDWAESMKKPVFVIAN 104
Query: 217 KVDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVY 276
K+DLL T V W+ E T +K +L L S+++ + + I+ D
Sbjct: 105 KIDLLEPWTTRKDVLQWLSERTGVRKEQIL---LVSAQNRGDMAELRRHIEDTFDADDRL 161
Query: 277 IL-GSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKL 335
+ G+ANVGKS + ALLK P S +PGTT+G + + G L
Sbjct: 162 LFAGAANVGKSTLLGALLK-------------NEVPTVSRLPGTTVGLTEY-RMVNGPVL 207
Query: 336 YDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWG 395
D PG+ V+ + L AL+P+ + S V+ G T+FWG
Sbjct: 208 VDAPGLKGEDPFVPVLCPDCLAALSPKKNFQ-SSIEVLK-------------TGQTVFWG 253
Query: 396 GLVRIDLLKVLPETC--LTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPI----GKQK 449
G+ ++ + L + P S+ ++ ++ D + +G L PP K +
Sbjct: 254 GMAQLTVADAGERGWVRLGIFAPDSVTIHRTREERIDGLMKDHVGELLVPPCRKCAAKLR 313
Query: 450 AEGWKGLDRERLLEIKFEDTERPASDVAISGLGWISV 486
+ W RE I RP D+ + G+GW+++
Sbjct: 314 TQSW----REEEFRI------RPEEDLVVPGIGWVAL 340
>gi|356538577|ref|XP_003537779.1| PREDICTED: uncharacterized protein yqeH-like [Glycine max]
Length = 592
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 109/455 (23%), Positives = 190/455 (41%), Gaps = 90/455 (19%)
Query: 93 KVNS-AVASCYGCGAPLQTSESDAPGY--------------------------------- 118
+VNS ++ C GCG +Q S PGY
Sbjct: 81 EVNSQSLHVCPGCGVYMQDSNPKHPGYFIKPSEKDLSYRLYNNLEPVAQEPEFSNTVKRG 140
Query: 119 -------VDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYAGGKQFVSADEL 171
+D D L +K K V+C RC L H + F +
Sbjct: 141 IVIEPEKLDDDDANLIRKPE--KPVVCARCHSLRHYGKVKDPTVENLLP---DFDFDHTV 195
Query: 172 REKLSHLRREKALIVKLVDIVDFNGSFLARIRDL----------------AGANP-IILV 214
KL+ +++++ +VD+VDF+GSF ++ L +G P ++LV
Sbjct: 196 GRKLASASGTRSVVLMVVDVVDFDGSFPRKVAKLVSKTIEDHSAAWKQGKSGNVPRVVLV 255
Query: 215 VTKVDLLPKGTDFNCVGDWVVEATTKKKLN-VLSVHLTSSKSLAGIVGVASEIQKEKKGR 273
VTK+DLLP + W+ + + +N V S+H+ S+ G+ + I R
Sbjct: 256 VTKIDLLPSSLSPTRLEHWIRQRAREGGINKVSSLHMVSALRDWGLKNLVDNIVDLAGPR 315
Query: 274 -DVYILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDA-FLG 331
+V+ +G+ N GKS IN++ K G + ++ VPGTTLG ++++ F
Sbjct: 316 GNVWAVGAQNAGKSTLINSIGKYAG--------GKITHLTEAPVPGTTLGIVRVEGVFSS 367
Query: 332 GGKLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFT 391
KL+DTPG+ ++ + E+ + L+ +++ + + G +
Sbjct: 368 QAKLFDTPGLLHPYQITTRLMREEQKLVHVGKELKPRTYRIKA--------------GHS 413
Query: 392 IFWGGLVRIDLLKV-LPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKA 450
I GLVR+D+ + L +T + L ++M + A + +Q G L PPIG+++
Sbjct: 414 IHIAGLVRLDIEETPLDSIYVTVWASPYLPLHMGKIENACKMFQDHFGCQLQPPIGEKRV 473
Query: 451 EGWKGLDRERLLEIKFEDTERPASDVAISGLGWIS 485
+ R R + E + D+A++GLGW +
Sbjct: 474 QELGNWVR-REFHVSGNSWESSSVDIAVAGLGWFA 507
>gi|257125887|ref|YP_003164001.1| HSR1-like GTP-binding protein [Leptotrichia buccalis C-1013-b]
gi|257049826|gb|ACV39010.1| GTP-binding protein HSR1-related [Leptotrichia buccalis C-1013-b]
Length = 373
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 98/431 (22%), Positives = 177/431 (41%), Gaps = 74/431 (17%)
Query: 98 VASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRC-RLLSHGHMITAVGGN 156
+ C GCG LQ + + GYV + + + +LC RC ++ ++G +
Sbjct: 3 IKKCSGCGIELQFEDKNKEGYVPEEKFITQD------NLLCQRCFKIKNYGENLV----- 51
Query: 157 GGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVT 216
F D L+E ++ ++ +I+ + DI+DF GSF I D I+++
Sbjct: 52 ------NNFSKEDYLKE-VNESVKKSDIILPIFDIIDFEGSFTEEILDYLRDYRSIILIN 104
Query: 217 KVDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQK--EKKGRD 274
K+DLLP + +WV + ++ + + S+K+ G+ G+ +I+ + K
Sbjct: 105 KIDLLPDFIHPTEISNWVKDRLAEEDIVPDDIAFISAKNRYGVNGIIRKIKNIFQNKKVK 164
Query: 275 VYILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGK 334
+LG +NVGKS+ IN LL KY GTTL I
Sbjct: 165 ATVLGVSNVGKSSVINLLLGN------NKITTSKY-------SGTTLKSINNRIPNSEIT 211
Query: 335 LYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFW 394
+ DTPG+ R + ++ E+ L P + ++F + E N F F I
Sbjct: 212 IIDTPGLIPDGRISDLISVENGLKLVPAGEISRKTFKL----EENQVFMFDVFCRFKILE 267
Query: 395 GGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWK 454
+LLK + + Y KS++ ++ ++ + E +
Sbjct: 268 N-----ELLKSGSKPIFSAYASKSVKFHVAREERVETLLSGSF------------FEILE 310
Query: 455 GLDRERLLEIKF---EDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAV 511
G ++++ + +F E ++ I+GLGWI+V+ G L + +
Sbjct: 311 GSEKKKYFQNEFVTHEVEIEENEELVIAGLGWINVK----------------RGPLKIQL 354
Query: 512 HVPKPVEVFVR 522
VP+ V+V +R
Sbjct: 355 EVPEKVKVVIR 365
>gi|242133622|gb|ACS87913.1| conserved hypothetical protein [Leptomonas seymouri]
Length = 1023
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 110/445 (24%), Positives = 168/445 (37%), Gaps = 108/445 (24%)
Query: 138 CGRCRLLSHGHMITAVGGNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGS 197
C RC L N G G ++ SA + E+L L+ +K ++V +VDI DF GS
Sbjct: 462 CHRCHALE----------NMGVEGRRKVWSAPDFTEQLRALKEKKCVVVLVVDITDFPGS 511
Query: 198 FLARIRDLAGA-NPIILVVTKVDLLPKGTDFNCVGD----------------WVVEATTK 240
+ + L NP+I+ V K+D + + FN G WV++ +
Sbjct: 512 MVYNLPGLISMNNPVIIAVNKMDCI-RNRSFNYSGKDRGVAACLVTESYVRRWVLDIAVQ 570
Query: 241 KKL---NVLSVHLTSSKSLAGIVGVASEIQ--------KEKKGRDVYILGSANVGKSAFI 289
L + V S+K G+ + S I+ + K Y +G ANVGKS+ I
Sbjct: 571 FGLPHHQIKRVVPISAKRGWGVPHLISTIEETANLNLRRPSKPLPTYFVGVANVGKSSVI 630
Query: 290 NALLKKMGERDPAAAMAQK------------------YRPIQ------------------ 313
NA+ + P ++K Y P
Sbjct: 631 NAMAHALYVPQPPHPQSKKVYFTKTNKEGKEAVFWRWYTPPNVNQAEMIDIRGRHDKRAS 690
Query: 314 -----SAVPGTTLG--PIQIDAFLGGGKLYDTPGVHLHHRQAAV--------VHAEDLPA 358
S++PGTT+ ++I K G QAA + D P
Sbjct: 691 KLMTVSSLPGTTVAVNAVRISLSPAADKAARLQGPEADTAQAATTDESAEAQTYFYDTPG 750
Query: 359 LAPQSRLRGQSFAVISETETNNEFKSHG----LNGFTIFWGGLVRIDLLKVLPETCLTF- 413
L P R + +F++ L G T+F GGL ID+++ P L
Sbjct: 751 LLPHWHQRSPLTLLQMRRTLIRKFRNPQCFILLPGHTLFLGGLAAIDIVRGPPRGLLFLV 810
Query: 414 YGPKSLQVYMVPTDKADEFYQKELGVTLTPP-----------IGKQKAEGWKGLDRER-- 460
Y + ++ +V T ++D F+Q++LG L PP + A GL +
Sbjct: 811 YTSQKVRNAIVHTVQSDNFWQEQLGKALDPPGSHEQLLPMDNVSAGGAAAAPGLSETKSY 870
Query: 461 LLEIKFEDTERPASDVAISGLGWIS 485
L E RP +DV I GLGW+S
Sbjct: 871 LFECYARHRRRPKADVYICGLGWVS 895
>gi|237831757|ref|XP_002365176.1| hypothetical protein TGME49_059920 [Toxoplasma gondii ME49]
gi|211962840|gb|EEA98035.1| hypothetical protein TGME49_059920 [Toxoplasma gondii ME49]
Length = 658
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 130/295 (44%), Gaps = 54/295 (18%)
Query: 134 KTVLCGRCRLLSHGHMITAVGGNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVD 193
K +LC RC + G I G G++ G + D + + LR ++ + + +D++
Sbjct: 380 KPILCQRCHAMRSGKKIDE-GLRVGFSHGDDLLHPDRFKRLIGSLRTKRCIFLLFLDLI- 437
Query: 194 FNGSFLARIRDLAGANPIILVVTKVDLLPKG--------------------TDFNCVGDW 233
+ + + DL NP+ + VTK DLLP T+ N +
Sbjct: 438 -SPELIPALPDLVRVNPLYVAVTKCDLLPGSLRRPDAPFNSRAEGFRRRCITNTNVARHY 496
Query: 234 VVEATTK----KKLNVLSVHLTSSKSLAGIVGVASEIQKE--KKGRDVYILGSANVGKSA 287
V E ++ K V ++ + S+KS AG+ + + + KE ++ R VY++G+AN GKS+
Sbjct: 497 VFEMLSRAYKLKDFTVKNIFMISNKSGAGLTHLINAVGKEAIRRKRPVYVIGAANAGKSS 556
Query: 288 FINALLKKMGERDPAAAMAQKYRP----------IQSAVPGTTLGPIQIDAFLGGGKLYD 337
F+N +L K RD AA +P SAVPGTTL I I G K+ D
Sbjct: 557 FLNKILAK-ATRDTDAAAGPLQKPQLKGAKAAAAAASAVPGTTLDFIPI-VVNGKWKVID 614
Query: 338 TPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTI 392
TPGV L A ++ +G V + E+NN S + TI
Sbjct: 615 TPGVFLKGSYANLL-------------TQGSGIRVRAMGESNNSVDSASVTIATI 656
>gi|291223758|ref|XP_002731875.1| PREDICTED: GI18656-like [Saccoglossus kowalevskii]
Length = 765
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 117/242 (48%), Gaps = 24/242 (9%)
Query: 94 VNSAVASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAV 153
+ S++ C GCGA L + PGY+ + + H + + +C RC LL+ + V
Sbjct: 330 IASSMMPCAGCGATLHCHDIAKPGYLPSEKF-TSLNHLELERTICQRCWLLTRYQLALDV 388
Query: 154 GGNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGAN-PII 212
V+ + + +S ++R +A+++ +VD++DF S ++++ G N I
Sbjct: 389 K-----------VTPTDFVKLISQIKRRRAMVICMVDLMDFPCSIFPNLKEIIGNNKQTI 437
Query: 213 LVVTKVDLLPKGTDFNC------VGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEI 266
+V K+D+LPK + + VEA N+ V L S+KS G+ + +++
Sbjct: 438 IVGNKLDILPKDSPKYLEHIKTKIIQECVEAGIALLQNIRHVALISAKSGFGVEDLITQM 497
Query: 267 QK--EKKGRDVYILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPI 324
Q+ KG DVY++G NVGKS N LL+ + + + K S PGTTL +
Sbjct: 498 QQIWRYKG-DVYLVGCTNVGKSTLFNRLLESDYCKTKVSNILHK--ATISLWPGTTLNLL 554
Query: 325 QI 326
+
Sbjct: 555 KF 556
>gi|340054098|emb|CCC48392.1| conserved hypothetical protein, fragment, partial [Trypanosoma
vivax Y486]
Length = 743
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 121/511 (23%), Positives = 194/511 (37%), Gaps = 157/511 (30%)
Query: 101 CYGCGAPLQTSESDAPGYV---DPDTY-------------------ELK---KKHHQ--- 132
C GCGA LQ + ++ GYV D + Y EL+ KKH +
Sbjct: 139 CSGCGALLQDRDENSFGYVRRGDIERYIVERQRKMKVKAEYADRMSELQAHWKKHGRCVG 198
Query: 133 -----FKT--------------VLCGRCRLLSHGHMITAVGGNGGYAGGKQFVSADELRE 173
F T +C RC L N G G ++ SA + E
Sbjct: 199 EEWLDFMTQEEFDAFYRDRNSPFVCYRCHALE----------NLGVEGRRRVWSAPDFTE 248
Query: 174 KLSHLRREKALIVKLVDIVDFNGSFLARIRDLAG----ANPIILVVTKVDLLPKGTDFNC 229
KL LR +K ++V +VDI DF G+ + DL G N +I+ V K+D + + FN
Sbjct: 249 KLRALREKKCVVVLVVDITDFPGTM---VYDLPGLISMNNDVIIAVNKMDCI-RNRSFNY 304
Query: 230 VG----------------DWVVEATTKKKL------NVLSVHLTSSKSLAGIVGVASE-- 265
G +WV + + L +V+ + ++ ++G E
Sbjct: 305 SGKDKAVAACLLKEQYVRNWVTDIAVQFGLPRHQIKDVVPISAKRGWNIEKLIGTVEEAS 364
Query: 266 ---IQKEKKGRDVYILGSANVGKSAFINALLKKM------------------GERDPAAA 304
+++ K Y +G ANVGKS+ +NA+ K+ + A
Sbjct: 365 NLNLRRPVKPMMTYFVGVANVGKSSVLNAIAHKLYIPLPPHPESRKVYYTKKAKDGTEAV 424
Query: 305 MAQKYRPIQ-----------------------SAVPGTTLGPIQIDAFLGGGK------L 335
+ Y P S++PGTT+ + L G L
Sbjct: 425 FWRWYTPPNVNQAEMIDIPSRHDKKASKLLTVSSLPGTTVEATAVRVSLTKGTSGEKAYL 484
Query: 336 YDTPGVHLH-HRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFW 394
+DTPG+ H HR + + + L + R Q F ++ G T+
Sbjct: 485 FDTPGLLPHWHRHSPLTLLQMRRTLIRKYR-NPQCFILVP--------------GNTLLL 529
Query: 395 GGLVRIDLLKVLPETCL-TFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIG-KQKAEG 452
GL ID++K L Y + ++ ++ T+++DEF++++LG L PP +Q E
Sbjct: 530 SGLAAIDIVKGTSRGLLFMVYTSQKVRSAIINTERSDEFWREQLGKALDPPGSLEQLGEL 589
Query: 453 WKGLDRERLLEIKFEDTERPASDVAISGLGW 483
+ L E RP +DV + G+GW
Sbjct: 590 RLTESKSYLFECYKRHRRRPKADVYVCGIGW 620
>gi|221506660|gb|EEE32277.1| conserved hypothetical protein [Toxoplasma gondii VEG]
Length = 658
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/246 (30%), Positives = 115/246 (46%), Gaps = 41/246 (16%)
Query: 134 KTVLCGRCRLLSHGHMITAVGGNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVD 193
K +LC RC + G I G G++ G + D + + LR ++ + + +D++
Sbjct: 380 KPILCQRCHAMRSGKKIDE-GLRVGFSHGDDLLHPDRFKRLVGSLRTKRCIFLLFLDLI- 437
Query: 194 FNGSFLARIRDLAGANPIILVVTKVDLLPKG--------------------TDFNCVGDW 233
+ + + DL NP+ + VTK DLLP T+ N +
Sbjct: 438 -SPELIPALPDLVRVNPLYVAVTKCDLLPGSLRRPDAPFNSRAEGFRRRCITNTNVARHY 496
Query: 234 VVEATTK----KKLNVLSVHLTSSKSLAGIVGVASEIQKE--KKGRDVYILGSANVGKSA 287
V E ++ K V ++ + S+KS AG+ + + + KE ++ R VY++G+AN GKS+
Sbjct: 497 VFEMLSRAYKLKDFTVKNIFMISNKSGAGLTHLINAVGKEAIRRKRPVYVIGAANAGKSS 556
Query: 288 FINALLKKMGERDPAAAMAQKYRP----------IQSAVPGTTLGPIQIDAFLGGGKLYD 337
F+N +L K RD AA +P SAVPGTTL I I G K+ D
Sbjct: 557 FLNKILAK-ATRDTDAASGPLQKPQLKGAKAAAAAASAVPGTTLDFIPI-VVNGKWKVID 614
Query: 338 TPGVHL 343
TPGV L
Sbjct: 615 TPGVFL 620
>gi|154341557|ref|XP_001566730.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134064055|emb|CAM40246.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 934
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 128/546 (23%), Positives = 193/546 (35%), Gaps = 190/546 (34%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVL----------------------- 137
C GCGA LQ S D GYV P E K +L
Sbjct: 297 CTGCGALLQNSSEDTFGYVRPGEIEKYVAQRNEKALLRHEYAARMAELQAHWEKHGRQVG 356
Query: 138 ------------------------CGRCRLLSHGHMITAVGGNGGYAGGKQFVSADELRE 173
C RC L N G G ++ SA + +
Sbjct: 357 EEWLDFMTQEEFDAFYRDRPRPFTCHRCHALE----------NLGVEGRRKVWSAPDFTD 406
Query: 174 KLSHLRREKALIVKLVDIVDFNGSFLARIRDLAG----ANPIILVVTKVDLLPKGTDFNC 229
+L L+ +K ++V +VDI DF GS + DL G NP+I+ V K+D + + FN
Sbjct: 407 QLRALKEKKCVVVLVVDITDFPGSM---VYDLPGLISMNNPVIIAVNKMDCI-RNRSFNY 462
Query: 230 VGD----------------WVVEATTKKKL---NVLSVHLTSSKSLAGIVGVASEIQ--- 267
G WV++ + L + V S+K GI + S I+
Sbjct: 463 AGKDRSVAACLVSESYVRRWVLDIAVQFGLPQHQIKRVVPVSAKRGWGITPLISAIEDAA 522
Query: 268 -----KEKKGRDVYILGSANVGKSAFINALLKKMGERDPAAAMAQK-------------- 308
+ + Y +G ANVGKS+ INA+ + P ++K
Sbjct: 523 NLNLRRPHQPLPTYFVGVANVGKSSVINAMAHALYVPQPPHPASRKVYYTKTDAEGKEAV 582
Query: 309 ----YRPIQ-----------------------SAVPGTT---------LGPI-------- 324
Y P S++PGTT +GP
Sbjct: 583 FWRWYTPPNVNQAEMLDIRGRHDKKASKLMTVSSLPGTTVAVNAVRLSIGPTAQTVKQEH 642
Query: 325 ----QIDAFLGGGK--------LYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAV 372
+ A LG + +YDTPG+ H Q +++ + ++ Q F +
Sbjct: 643 QRLSEGAAVLGRAEELAKTQTYIYDTPGLLPHWHQRSLLTLLQMRRTLIRTFRNPQCFLL 702
Query: 373 ISETETNNEFKSHGLNGFTIFWGGLVRIDLLKVLPETCLTF--YGPKSLQVYMVPTDKAD 430
L G T+F GGL +D+++ P L F Y + ++ +V T ++D
Sbjct: 703 --------------LPGHTLFLGGLAAVDVVRG-PSRGLLFLVYTSQKVRNAIVNTVQSD 747
Query: 431 EFYQKELGVTLTPPIGKQK---------AEGWKGLDRER--LLEIKFEDTERPASDVAIS 479
F++ +LG L PP ++ A G GL R L E RP +D+ +
Sbjct: 748 AFWRAQLGKALDPPGSYEQLLTLDDLSSAAGPPGLSETRSYLFECYGRHRRRPKADLYVC 807
Query: 480 GLGWIS 485
GLGW S
Sbjct: 808 GLGWTS 813
>gi|340370800|ref|XP_003383934.1| PREDICTED: uncharacterized protein C4orf14 homolog [Amphimedon
queenslandica]
Length = 583
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 110/243 (45%), Gaps = 28/243 (11%)
Query: 99 ASCYGCGAPLQTSESDAPGYVDPDTYE--LKKKHHQFKTVLCGRCRLLSHGHMITAVGGN 156
ASC GCG+ +S GY+ P+ L+ K V+C RC L H + V
Sbjct: 68 ASCSGCGSIFHSSVPQTQGYLPPNKMASLLESDAPSDKPVICQRCFYLRHYNNPLHVT-- 125
Query: 157 GGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANP----II 212
+ D+ + LSHL+ EK L++ ++D +DF S +R L NP +
Sbjct: 126 ---------LPPDDYLKSLSHLKDEKCLVLVIIDGIDFPSSLFPSLRTL--LNPQFSKVY 174
Query: 213 LVVTKVDLLP-KGTDFNCVGDWVVEATTKKKLN---VLSVHLTSSKSLAGIVGVASEIQK 268
LV+ K+D+LP + ++ +K ++ V+ +H S+K+ G+ + I
Sbjct: 175 LVINKIDVLPLMDESMKIRFESYIKTEAEKSIDPATVIGIHYVSAKTGQGVGFLTDSITT 234
Query: 269 EKKGR-DVYILGSANVGKSAFINALLKKMGERDPAAAMA----QKYRPIQSAVPGTTLGP 323
E R +VY+LG NVGKS+ LL+ + P P S PGTT+G
Sbjct: 235 EWGNRGNVYLLGCTNVGKSSLFKLLLQSLCGVQPGQLKTVNEISAPSPTISHWPGTTIGL 294
Query: 324 IQI 326
I+
Sbjct: 295 IKF 297
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 82/192 (42%), Gaps = 30/192 (15%)
Query: 335 LYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFW 394
L+DTPG + + +L + P+ RL ++ ++ E G ++F
Sbjct: 393 LHDTPGAVNDIQATNHLTTNELRLMLPKKRLSPRTI-ILKE-------------GQSVFL 438
Query: 395 GGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTP-PIGK-QKAEG 452
GGL R+D ++ T + L ++ T ADE Y++ LG L P+G ++ +
Sbjct: 439 GGLARLDYIQGKTSAYFTIFTSSYLPIHTRRTRDADEMYKRHLGQPLLKVPVGDAERIDA 498
Query: 453 WKGLDRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVH 512
+ L+ E L+ I D+ +S +GW+ V LE E+ + +
Sbjct: 499 FPPLEPEELI-ITGRGFSSSVCDIILSSVGWVCVTA----------GLEH---EIKILAY 544
Query: 513 VPKPVEVFVRNP 524
P +F+R+P
Sbjct: 545 TPNGKGIFMRSP 556
>gi|320165317|gb|EFW42216.1| nitric-oxide synthase [Capsaspora owczarzaki ATCC 30864]
Length = 819
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 96/199 (48%), Gaps = 30/199 (15%)
Query: 136 VLCGRCRLLSHGHMITAVGGNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFN 195
++C RC L+H + + V + +E+L+ +R ++A IV +VD+ F
Sbjct: 235 LICKRCHQLTHNNQLLPVQ-----------IDPAHFQEQLAPIRSKEAFIVHVVDVTTFP 283
Query: 196 GSFLARIRDLAGANP-IILVVTKVDLLPKGTD--FNCVGDWVVEATTKK-----KLNVLS 247
S L + + G+N I V +K DLLP G D + + W+ + +++
Sbjct: 284 CSSLPNLEEYVGSNQRIFFVGSKADLLP-GYDKHLSRIRQWLSRLIINHYSPAVRSHIVG 342
Query: 248 VHLTSSKSLAGIVGVASEIQKEKKGRDVYILGSANVGKSAFINALLKKM----GERDPAA 303
VHL S G + IQ+ + GRDVY++G ANVGKS +N LL K+ R P
Sbjct: 343 VHLVSGMKGTGCWTLLDAIQRLRGGRDVYVVGCANVGKSTLVNNLLDKLRVLNESRSPVT 402
Query: 304 AMAQKYRPIQSAVPGTTLG 322
++ S VPGTT+G
Sbjct: 403 SIT------TSGVPGTTIG 415
Score = 46.2 bits (108), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 52/114 (45%), Gaps = 17/114 (14%)
Query: 333 GKLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLN-GFT 391
G L+DTPG+ H+ + A D+ A+ P + Q F LN G
Sbjct: 520 GYLFDTPGIMSPHQSLHRLSAADISAVIPTKLIVPQVFR---------------LNPGQC 564
Query: 392 IFWGGLVRIDLLKVLPETCL-TFYGPKSLQVYMVPTDKADEFYQKELGVTLTPP 444
+F GGL R+D+L L T + +++++ A++FYQ+ LG L P
Sbjct: 565 VFIGGLGRLDVLSSADGAVLVTVFVSNTVKLHATRISNAEDFYQRHLGTPLLSP 618
>gi|218281649|ref|ZP_03488050.1| hypothetical protein EUBIFOR_00617 [Eubacterium biforme DSM 3989]
gi|218217256|gb|EEC90794.1| hypothetical protein EUBIFOR_00617 [Eubacterium biforme DSM 3989]
Length = 359
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 99/394 (25%), Positives = 158/394 (40%), Gaps = 71/394 (18%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG LQ + A GYV C RC + H +T
Sbjct: 5 CKGCGVLLQNEDEKALGYVPT-----------LDASYCQRCYRIRHYGDVTI-------- 45
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
+Q + ++ EK++ + ++ +VD+ F + ++R+ I++V+TK D+
Sbjct: 46 NMQQGIESNATLEKINKI---DGVVFWVVDLFAFEANLISRLNQKLPGKDIVMVLTKRDV 102
Query: 221 LPKG-TD---FNCVGDWVVEATTKKKLNVLSVHLT--SSKSLAGIVGVASEIQKEKKGRD 274
LP TD N V + E K V+ +L + KS + + I K +K R+
Sbjct: 103 LPTTLTDEKIINFVKHRLHEENIIVKDIVICGYLLKENDKSREYSSRIVNAILKYRKNRN 162
Query: 275 VYILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLG--PIQIDAFLGG 332
V +G AN GKS +N LL +D S PGTTL PI + +
Sbjct: 163 VIFMGVANAGKSTVLNHLL---ATKDLTT----------SQNPGTTLDLVPIPFEDY--- 206
Query: 333 GKLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTI 392
+YDTPG+ H + ++DL + P +R +S+ + F +
Sbjct: 207 -TIYDTPGIENTHSLLTYLQSKDLKTVIPTKPIR----PFVSQIFEDQSFAA-------- 253
Query: 393 FWGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEG 452
GL R+D++ V + + Y +SL ++ AD +QK L L P +
Sbjct: 254 --AGLARLDVV-VSGKATVVGYFSRSLSIHRGKLSNADALWQKHLNGMLVPCVDTSL--- 307
Query: 453 WKGLDRERLLEIKFEDTERPASDVAISGLGWISV 486
L K ED + DV I G+GW +
Sbjct: 308 ---LTMHTFHAPKLEDEKM---DVCIHGIGWFCI 335
>gi|124810009|ref|XP_001348738.1| conserved Plasmodium protein, unknown function [Plasmodium
falciparum 3D7]
gi|23497637|gb|AAN37177.1| conserved Plasmodium protein, unknown function [Plasmodium
falciparum 3D7]
Length = 797
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 80/363 (22%), Positives = 159/363 (43%), Gaps = 58/363 (15%)
Query: 180 REKALIVKLVDIVDFNGSFLARI------RDLAGANPIILVVTKVDLLPKGTDFNCVGDW 233
+ K+L++ ++DI + + L + +DL II +V KVD LPK T+ + + W
Sbjct: 390 KRKSLVLYIIDITNIENTILPELYIGCKNKDLN----IIWLVNKVDCLPKSTNLDMIKIW 445
Query: 234 VVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEK--------KGRDVYILGSANVGK 285
+ K + H+ ++ + ++ +E+ KG D+YI+G NVGK
Sbjct: 446 FRNLVRQIK----NSHINDLIFISALKFYNYDMLEERMKYYVDIDKGTDIYIVGCVNVGK 501
Query: 286 SAFINALLKKMGERDPAAAMAQKYR--PIQSAVPGTTLGPIQIDAFLGGGKLYDTPGVHL 343
S F+N+ LK + + ++ + S +P TTL + + DT G+
Sbjct: 502 STFVNSFLKYINYKHIGDIYNKRKKGGVTTSNIPYTTLN-YNVFKLKKNINIIDTIGIPT 560
Query: 344 HHRQAAVVHAE-DLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRIDL 402
++ +++++ + DL + +++ ++ + ++ +I G + I+
Sbjct: 561 KYQYSSILYKDIDLNGICINKKIQPFTYKLKEDS--------------SIIIGSMCYINF 606
Query: 403 LKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRERLL 462
+ + LTFY + V+M T+K + F +K+ L PP + K + +
Sbjct: 607 IHG-TFSLLTFYLSNKVTVHMCRTEKVESFLEKKKCSFLYPPHINSDFDLLKPFVKHT-I 664
Query: 463 EIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVEVFVR 522
+I +D E D+ IS LGW S+ + SG ++VPK ++++ R
Sbjct: 665 KIYGKDFE-SVDDIVISDLGWFSI---------------TGSGTKIFEIYVPKNIKIYRR 708
Query: 523 NPM 525
M
Sbjct: 709 PSM 711
>gi|71666593|ref|XP_820254.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70885591|gb|EAN98403.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 917
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 110/437 (25%), Positives = 170/437 (38%), Gaps = 114/437 (26%)
Query: 132 QFKTVLCGRCRLLSHGHMITAVGGNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDI 191
Q K +C RC L N G G +Q SA + EKL LR +K ++V +VDI
Sbjct: 379 QNKPFVCHRCHALE----------NLGVEGRRQIWSAPDFTEKLRALREKKCVVVLVVDI 428
Query: 192 VDFNGSFLARIRDLAG----ANPIILVVTKVDLLPKGTDFNC----------------VG 231
DF G+ + DL G N +I+ V K+D + + FN V
Sbjct: 429 ADFPGTM---VYDLPGLISMNNDVIIAVNKMDCV-RNRSFNYSNKDRAIAARLVTERYVR 484
Query: 232 DWVVEATTKKKL------NVLSVHLTSSKSLAGIVGVASEIQKEKKGRDV-----YILGS 280
WV+ + L +V+ + ++ ++ E R + Y +G
Sbjct: 485 RWVIGIALQFGLPRHQIKDVVPISAKRGWNVDKLIAAVEEASNLNLTRPIKPMPTYFVGV 544
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQK------------------YRPIQ--------- 313
ANVGKS+ INA+ K+ P ++K Y P
Sbjct: 545 ANVGKSSVINAIAHKLYVPVPPHPESRKVYYTRKAKDGTEAVFWRWYTPPNVNQAEMIDI 604
Query: 314 --------------SAVPGTTLGPIQIDAFLGGGK------LYDTPGV--HLHHRQAAVV 351
S++PGTT+ + L G L+DTPG+ H HH
Sbjct: 605 PSRHDKKASKLLTVSSLPGTTVEANAVRVSLTKGAPGDAAYLFDTPGLLPHWHHS----- 659
Query: 352 HAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRIDLLKVLPETCL 411
+P + L+ + +I + F + G T+F GL ID++K L
Sbjct: 660 --------SPLTLLQMRR-TLIRKYRNPQCFIL--MPGNTLFLSGLAAIDVVKGTSRGML 708
Query: 412 -TFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER--LLEIKFED 468
Y + + ++ T+++DEF+Q +LG L PP G + G L + L E
Sbjct: 709 FMVYTSQKVCNAIIATERSDEFWQDQLGKALDPP-GSLEQLGDLRLTESKCYLFECYPRH 767
Query: 469 TERPASDVAISGLGWIS 485
RP +DV + G+GW S
Sbjct: 768 RRRPKADVYVCGIGWTS 784
>gi|383849691|ref|XP_003700478.1| PREDICTED: nitric oxide-associated protein 1-like [Megachile
rotundata]
Length = 739
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 104/232 (44%), Gaps = 24/232 (10%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA L ++ PGY+ + + + K +C RC L A
Sbjct: 232 CGGCGALLHCKDAKIPGYLPSELFS-NQAEEDLKLTICQRCHFLKFYK-----------A 279
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGA-NPIILVVTKVD 219
K VS ++ + L ++R+K I+ +VD+ DF S ++ + PI LV KVD
Sbjct: 280 ALKVNVSIEDYPKLLKVIKRKKCAIILVVDLTDFPCSIWPDLKSIMHPFTPIFLVGNKVD 339
Query: 220 LLPKGTDFNC--------VGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKK 271
LP+ + D VV+ T K N++ V + S+ + GI + +++Q +
Sbjct: 340 ALPRDRSTEVFLTRIKQLLADTVVDITGISKKNIMHVEIISALTKFGIEQLINKLQYKWS 399
Query: 272 GR-DVYILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLG 322
R DVY++G NVGKS N LL + A+ R S PGTTL
Sbjct: 400 VRGDVYLVGCTNVGKSTLFNVLLN--SDYCKVQAIDLIPRSTVSPWPGTTLN 449
Score = 39.3 bits (90), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 68/160 (42%), Gaps = 24/160 (15%)
Query: 336 YDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWG 395
YDTPG + ++ ++L P+ + ++F +FK T+F
Sbjct: 548 YDTPGTVQTDQILDLLTTDELMLTLPKVTVLPRTF----------DFKPQH----TVFVA 593
Query: 396 GLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQK--ELGVTLTPPIGKQKAEGW 453
GL R+D + T + L + + TD ADE Y + E + P ++ W
Sbjct: 594 GLGRLDYVDGRRLIRCTLFTSNELPITICYTDVADEVYDQLLETEAFVVPSNEPERLRVW 653
Query: 454 KGLDRERLLEIKFEDT---ERPASDVAISGLGWISVEPVR 490
L+ + ++E T + A+D+ +S GWI++ P +
Sbjct: 654 PKLESK-----EYEVTGIYKESAADIVLSNAGWIAITPAK 688
>gi|407852124|gb|EKG05773.1| hypothetical protein TCSYLVIO_003151 [Trypanosoma cruzi]
Length = 917
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 110/437 (25%), Positives = 169/437 (38%), Gaps = 114/437 (26%)
Query: 132 QFKTVLCGRCRLLSHGHMITAVGGNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDI 191
Q K +C RC L N G G +Q SA + EKL LR +K ++V +VDI
Sbjct: 379 QNKPFVCHRCHALE----------NLGVEGRRQIWSAPDFTEKLRALREKKCVVVLVVDI 428
Query: 192 VDFNGSFLARIRDLAG----ANPIILVVTKVDLLPKGTDFNC----------------VG 231
DF G+ + DL G N +I+ V K+D + + FN V
Sbjct: 429 ADFPGTM---VYDLPGLISMNNDVIIAVNKMDCV-RNRSFNYSNKDRAIAARLVTERYVR 484
Query: 232 DWVVEATTKKKL------NVLSVHLTSSKSLAGIVGVASEIQKEKKGRDV-----YILGS 280
WV + L +V+ + ++ ++ E R + Y +G
Sbjct: 485 RWVTGIALQFGLPRHQIKDVIPISAKRGWNVDKLIAAVEEASNLNLTRPIKPMPTYFVGV 544
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQK------------------YRPIQ--------- 313
ANVGKS+ INA+ K+ P ++K Y P
Sbjct: 545 ANVGKSSVINAIAHKLYVPVPPHPESRKVYYTRKAKDGTEAVFWRWYTPPNVNQAEMIDI 604
Query: 314 --------------SAVPGTTLGPIQIDAFLGGGK------LYDTPGV--HLHHRQAAVV 351
S++PGTT+ + L G L+DTPG+ H HH
Sbjct: 605 PSRHDKKASKLLTVSSLPGTTVEANAVRVSLTKGAPGDAAYLFDTPGLLPHWHHS----- 659
Query: 352 HAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRIDLLKVLPETCL 411
+P + L+ + +I + F + G T+F GL ID++K L
Sbjct: 660 --------SPLTLLQMRR-TLIRKYRNPQCFIL--MPGNTLFLSGLAAIDVVKGTSRGML 708
Query: 412 -TFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER--LLEIKFED 468
Y + + ++ T+++DEF+Q +LG L PP G + G L + L E
Sbjct: 709 FMVYTSQKVCNAIIATERSDEFWQDQLGKALDPP-GSLEQLGDLRLTESKCYLFECYPRH 767
Query: 469 TERPASDVAISGLGWIS 485
RP +DV + G+GW S
Sbjct: 768 RRRPKADVYVCGIGWTS 784
>gi|156085495|ref|XP_001610157.1| membrane protein [Babesia bovis T2Bo]
gi|154797409|gb|EDO06589.1| membrane protein, putative [Babesia bovis]
Length = 677
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 92/365 (25%), Positives = 157/365 (43%), Gaps = 45/365 (12%)
Query: 92 LKVNSAVASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMIT 151
+ + ++C GCG LQ+ +PGY+DP + C RC +S G +
Sbjct: 215 FDIATDASTCIGCGIRLQSGNLQSPGYIDP--LVMASIRESGGHARCRRCSSMSSGLIFN 272
Query: 152 AVGGNGGYAGGKQFVSADELREKLSHLRREKAL-------IVKLVDIVDFN-----GSFL 199
N A G + D RE ++ +R +L +V ++D +D + +
Sbjct: 273 ----NSDIAVGAD--ATDAARETVAIIRNALSLNATRNVTVVYMLDALDIHFEDGLAELI 326
Query: 200 ARIRDLAGANP-IILVVTKVDLLPKGTD---FNCVGDWVVEATTKKKLNVLSVHLTSSKS 255
A R ++ +V+ KVDLLP + V +V L + L SS++
Sbjct: 327 ASRRAQRTSDSHFYIVLNKVDLLPPHSRKRLIAYVHRYVKSRAPDLGLKPRHIFLLSSRT 386
Query: 256 LAGIVGVASEIQKE--KKGRDVYILGSANVGKSAFIN---ALLKKMGERDPAAAMAQKYR 310
+G+ S + + ++ ++ +G+ N GKS FIN L+ ER A +++
Sbjct: 387 GSGVNLFLSVLLDDAYRRRSKIFFVGATNTGKSTFINRLSNLVSCSDERKSDIAASKRAL 446
Query: 311 PIQSAVPGTTLGPIQIDAFLGGGKLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSF 370
S VPGTTL P++ID G ++YDTPG+ + + + + ++L P S +
Sbjct: 447 LSTSVVPGTTLRPLRIDTG-PGFEMYDTPGIVVPNAFTSYLTPDELKMAVPASLGAAKPL 505
Query: 371 AVISETETNNEFKSHGLNGFTIFWGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKAD 430
V G ++ G VRID+ K P T Y K ++V +V T++
Sbjct: 506 RVAC--------------GSSLLIGPFVRIDVTKGRP-WFFTPYFSKRVKVAVVRTNRIA 550
Query: 431 EFYQK 435
+F K
Sbjct: 551 QFLSK 555
>gi|91090296|ref|XP_971651.1| PREDICTED: similar to CG10914 CG10914-PA [Tribolium castaneum]
gi|270013800|gb|EFA10248.1| hypothetical protein TcasGA2_TC012448 [Tribolium castaneum]
Length = 709
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 113/232 (48%), Gaps = 24/232 (10%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYE--LKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGG 158
C GCGA L ++ PGY+ + ++ + ++C RC L H ++ V
Sbjct: 202 CGGCGALLHCKDTAIPGYIPSEIFKNSFLDGGATLEAIVCQRCHFLKHYNLALQVQ---- 257
Query: 159 YAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAG-ANPIILVVTK 217
V+ D+ + L+ + R L+V +VD++DF S I ++ G P+++V K
Sbjct: 258 -------VTPDDYPKVLASISRRGGLVVLMVDLLDFPCSIWPGIGEIFGYKTPLVVVGNK 310
Query: 218 VDLLPKGT-DF-----NCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKK 271
VDLLP+ + +F + D+V + ++ V L S+K+ G+ + + + +
Sbjct: 311 VDLLPQDSRNFLKRIKQTLLDYV-KLQGFGSFDIKEVALISAKTGFGVEDLITRLSSLNR 369
Query: 272 GR-DVYILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLG 322
+ DVYI+G NVGKS+ NAL++ + A + Q R S PGTTL
Sbjct: 370 VKGDVYIVGCTNVGKSSLFNALIQSDYCKTQAIDLIQ--RATTSVWPGTTLN 419
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 60/146 (41%), Gaps = 18/146 (12%)
Query: 391 TIFWGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTL--TPPIGKQ 448
++F GL R+D + T + + L + + + A+E YQK LG L P +
Sbjct: 559 SLFIAGLARLDYVDGPTSIRFTVFASQELPLTVCAIEDAEEIYQKLLGTDLFRVPSGDSK 618
Query: 449 KAEGWKGLDRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELH 508
+ W L+ + +K ++DV +S GW++V T E
Sbjct: 619 RLSRWPSLELAKEFTVKGRSWYESSNDVVLSNAGWVAVT-------------GKTELEYK 665
Query: 509 LAVHVPKPVEVFVRN---PMPVGKAG 531
L P+ V++R+ P VG +G
Sbjct: 666 LQAWTPEKRGVYIRDCLLPHAVGLSG 691
>gi|118359870|ref|XP_001013173.1| conserved hypothetical protein [Tetrahymena thermophila]
gi|89294940|gb|EAR92928.1| conserved hypothetical protein [Tetrahymena thermophila SB210]
Length = 690
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 89/364 (24%), Positives = 152/364 (41%), Gaps = 66/364 (18%)
Query: 170 ELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGA--NPIILVVTKVDLLP-KGTD 226
E +K L + + I+ +VD D + I D A A + IIL V K+D LP
Sbjct: 280 EFLKKAFKLVKRNSTIIFVVDATDLFATLNTSIVDYAFAQNHKIILAVNKIDALPPNNVQ 339
Query: 227 FNCVGDWVVEATTKKKLNVL----SVHLTSSKSLAGIVGVASEI----------QKEKKG 272
FN + V + +K N L + L S+KS G+ + I Q +
Sbjct: 340 FNQLKSVVKKCILEKYPNNLHLLEDIVLVSAKSGEGLEKITKYIISAKMESKQYQHSRYS 399
Query: 273 RDVYILGSANVGKSAFINA-------LLKKMGER----DPAAAMAQKYRPIQ-------- 313
++ Y++G AN GKS+FINA LLKK ++ +P +Q I+
Sbjct: 400 KNFYVMGFANTGKSSFINALNRQTKKLLKKQEDQQTNSNPENLNSQDKLMIKRLLGGTSV 459
Query: 314 -----------SAVPGTTLGPIQIDAFLGGGKLYDTPGV-HLHHRQAAVVHAEDLPALAP 361
S++PGTT+ ++ +YDTPG+ + H + D +
Sbjct: 460 GGEEDDQELTTSSIPGTTVSFVKSRNKRLNVNIYDTPGIPNPHQLYHYFSNPTDAKIIVI 519
Query: 362 QSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRIDLLKVLPETCLTFYGPKSLQV 421
++ Q F + + ++F+GGL RID + + F + V
Sbjct: 520 DKKISPQVFTISKD--------------LSVFFGGLARIDQTQGIDVNAAVFMSS-HIAV 564
Query: 422 YMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRERLLEIKFEDTERPASDVAISGL 481
++ + KA+E + K+ L P + + + + + +++I F+ R D+ I GL
Sbjct: 565 HVTKSYKANEVFIKQYNNILVPVLN---PDFTQIIFQRHVIDISFDSKGRCNQDLEIFGL 621
Query: 482 GWIS 485
GW+S
Sbjct: 622 GWLS 625
>gi|156372752|ref|XP_001629200.1| predicted protein [Nematostella vectensis]
gi|156216194|gb|EDO37137.1| predicted protein [Nematostella vectensis]
Length = 500
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 113/239 (47%), Gaps = 38/239 (15%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFK--TVLCGRCRLLSHGHMITAVGGNGG 158
C GCG+ Q+++ ++PGY+ + + K++ + V+C RC L +
Sbjct: 1 CPGCGSIFQSNDIESPGYIRAEKHPEKQRSYYANESQVICQRCFDLRY------------ 48
Query: 159 YAGG-KQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAG-ANPIILVVT 216
Y+ V+ ++ + LSH+ R KALI+ +VDI+D GS + D+ G A I++V
Sbjct: 49 YSKAIPTLVNTAQVTKFLSHISRRKALILYVVDILDLPGSTFPHLLDIVGPAKRIVIVAN 108
Query: 217 KVDLLPKGTDFNCVGDWVVEATTKKKL------------NVLSVHLTSSKSLAGIVGVAS 264
KVD+LP+ W+ E ++++ NV V L S+K G+ +
Sbjct: 109 KVDMLPQDGR-----PWLQEKRLREEVLRLCREHGLESGNVKDVCLVSAKEGFGVPQLVQ 163
Query: 265 EI--QKEKKGRDVYILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTL 321
+I + G D+Y+LG +N GK+ N + + M Q R S PGTT+
Sbjct: 164 KILVHWDHDG-DIYMLGCSNSGKTTLFNTFMDLLNVHKRRGNMLQ--RSTVSKWPGTTM 219
>gi|407417084|gb|EKF37934.1| hypothetical protein MOQ_001862 [Trypanosoma cruzi marinkellei]
Length = 925
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 109/435 (25%), Positives = 169/435 (38%), Gaps = 114/435 (26%)
Query: 134 KTVLCGRCRLLSHGHMITAVGGNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVD 193
K +C RC L N G G +Q SA + EKL LR +K ++V +VDI D
Sbjct: 381 KPFVCHRCHALE----------NLGVEGRRQIWSAPDFTEKLRALREKKCVVVLVVDIAD 430
Query: 194 FNGSFLARIRDLAG----ANPIILVVTKVDLLPKGTDFNC----------------VGDW 233
F G+ + DL G N +I+ V K+D + + FN V W
Sbjct: 431 FPGTM---VYDLPGLISMNNDVIIAVNKMDCV-RNRSFNYSNKDRAIAARLVTERYVRRW 486
Query: 234 VVEATTKKKL------NVLSVHLTSSKSLAGIVGVASEIQKEKKGRDV-----YILGSAN 282
V + L +V+ + ++ ++ E R + Y +G AN
Sbjct: 487 VTGIALQFGLPRHQIKDVVPISAKRGWNVEKLIAAVEEASNLNLTRPIKPMPTYFVGVAN 546
Query: 283 VGKSAFINALLKKMGERDPAAAMAQK------------------YRPIQ----------- 313
VGKS+ INA+ K+ P ++K Y P
Sbjct: 547 VGKSSVINAIAHKLYVPVPPHPESRKVYYTRKAKDGTEAVFWRWYTPPNVNQAEMIDIPS 606
Query: 314 ------------SAVPGTTLGPIQIDAFLGGGK------LYDTPGV--HLHHRQAAVVHA 353
S++PGTT+ + L G L+DTPG+ H HH
Sbjct: 607 RHDKKASKLLTVSSLPGTTVEANAVRVSLTKGAPGDAAYLFDTPGLLPHWHHS------- 659
Query: 354 EDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRIDLLKVLPETCL-T 412
+P + L+ + +I + F + G T+F GL ID++K L
Sbjct: 660 ------SPLTLLQMRR-TLIRKYRNPQCFIL--MPGNTLFLSGLAAIDVVKGTSRGMLFM 710
Query: 413 FYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER--LLEIKFEDTE 470
Y + ++ ++ T+++DEF+Q +LG L PP G + G L + L E
Sbjct: 711 VYTSQKVRNAIIATERSDEFWQDQLGKALDPP-GSLEQIGDLRLTESKCYLFECYPRHRR 769
Query: 471 RPASDVAISGLGWIS 485
RP +DV + G+GW S
Sbjct: 770 RPKADVYVCGIGWTS 784
>gi|429328803|gb|AFZ80563.1| hypothetical protein BEWA_034200 [Babesia equi]
Length = 569
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 83/326 (25%), Positives = 139/326 (42%), Gaps = 35/326 (10%)
Query: 168 ADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGAN---PIILVVTKVDLLPKG 224
+ E+ L+ + ++++ L+D+ + S + + +A N +I V KVD++PK
Sbjct: 229 SSEIITDLAVRIKNDSVVIFLIDLTNLEASVIPELY-IALRNRTLDVIWVANKVDVIPKP 287
Query: 225 TDFNCVGDW----VVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
D + W V + K +V+ V T L + + R++Y++G+
Sbjct: 288 NDPTEIKRWLRSFVRQIGNAKSADVILVSSTKGIGLDVLEHRMKAYLQTGNPRNIYVVGA 347
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
NVGKS F+N L + +SA+PGTTL I+ G KL DTPG
Sbjct: 348 TNVGKSTFVNRFLDFIQYNVGGTT--------RSAIPGTTLEFIEF-GLPKGFKLVDTPG 398
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRI 400
+ +P+ P R IS +T N G ++ GGL R+
Sbjct: 399 I-------------PIPSQVPSLLYRPIDLLSISIMKTINPLSIKLEAGRSLLVGGLARV 445
Query: 401 DLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGLDRER 460
DL++ F+ + + + + A++ + ++G +L PP K+ E L + R
Sbjct: 446 DLVQGSSTIVQCFFS-SGITIKVCRSVAAEDILKHQVGTSLYPPHDKEDFEKLLPLSKYR 504
Query: 461 LLEIKFEDT-ERPASDVAISGLGWIS 485
T RP + ISGLGWIS
Sbjct: 505 F---AVNCTGRRPVDEFVISGLGWIS 527
>gi|325296863|ref|NP_001191463.1| nitric oxide synthase-like protein [Aplysia californica]
gi|124357861|gb|ABN05382.1| nitric oxide synthase-like protein [Aplysia californica]
Length = 715
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 110/227 (48%), Gaps = 19/227 (8%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA LQ PG++ + ++L + + K +C RC + H +
Sbjct: 181 CTGCGAHLQCHNRTLPGFMVSEQFKLLTER-ELKRSICQRCYYMQHCNAFVEAK------ 233
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAG-ANPIILVVTKVD 219
+E E +S +R ++L+V +VD++D GS + + D G +P+++V K D
Sbjct: 234 -----TEPEEYTEMISKIRPTRSLVVIVVDLMDMQGSIVPNLTDYIGHKHPLLVVGNKAD 288
Query: 220 LL-PKGTDF-NCVGDWVVEATTKKKL-NVLSVHLTSSKSLAGIVGVASEI-QKEKKGRDV 275
LL P ++ + + EA L NV + +L S+K+ G+ + S + ++ DV
Sbjct: 289 LLAPDCPEYLRNAQERLKEACRHSGLKNVKAFNLISAKTGFGMEKLISTLFSFYRRKVDV 348
Query: 276 YILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLG 322
YI+G+AN GKS+ N LL + A + Q R S PGTTL
Sbjct: 349 YIVGTANSGKSSLFNILLSSDYCKHTARDLIQ--RATVSEWPGTTLN 393
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 72/154 (46%), Gaps = 17/154 (11%)
Query: 335 LYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFW 394
+YDTPG+ + ++ ++ L P S + + AV+ + + TIF
Sbjct: 505 VYDTPGIINPDQIMNLLSPDECTQLTPSSMIIPR--AVVLQPQQ------------TIFI 550
Query: 395 GGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELG--VTLTPPIGKQKAEG 452
GL RID LK LT + +L + + PT +AD +Y++ +G L P KQK
Sbjct: 551 SGLARIDYLKADVPLFLTVHSSSALPIRIGPTVEADGYYEQYVGSETLLLPMADKQKLSK 610
Query: 453 WKGLDRERLLEIKFEDTERPASDVAISGLGWISV 486
L R +K T A+DV +S +GW+SV
Sbjct: 611 LPSL-AARDFVVKGRGTLEAAADVQLSSVGWVSV 643
>gi|261328751|emb|CBH11729.1| hypothetical protein, conserved [Trypanosoma brucei gambiense
DAL972]
Length = 854
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 117/512 (22%), Positives = 197/512 (38%), Gaps = 155/512 (30%)
Query: 101 CYGCGAPLQTSESDAPGYV---DPDTYELKKKHH-------------------------- 131
C GCGA LQ + ++ GYV D + Y ++K+
Sbjct: 307 CRGCGALLQDQDENSFGYVRKGDVERYIIEKQQKMRARAEYADRMSELQAHWRKHGRRVG 366
Query: 132 ----QFKT--------------VLCGRCRLLSHGHMITAVGGNGGYAGGKQFVSADELRE 173
F T +C RC L N G G ++ SA + +
Sbjct: 367 EEWLDFMTQEEFDAFYRDRNAPFVCHRCHALE----------NLGMEGRRRIWSAPDFTD 416
Query: 174 KLSHLRREKALIVKLVDIVDFNGSFLARIRDLAG----ANPIILVVTKVDLLP------K 223
KL LR +K ++V +VD+ DF G+ + DL G N +I+ V K+D + +
Sbjct: 417 KLRALREKKCVVVLVVDVTDFPGTM---VYDLPGLISMNNDVIIAVNKMDCVRNRSFNYR 473
Query: 224 GTDFNCVGDWVVEATTKKKLNVLSVHL------------------TSSKSLAGIVGVASE 265
G D V E ++ + ++V + ++L V AS
Sbjct: 474 GKDRAVAACLVTERYVRRWVTGIAVQFGLPRHQIKDVIPLSAKRGWNVEALIAAVEEASN 533
Query: 266 IQKEKKGRDV--YILGSANVGKSAFINALLKKMGERDPAAAMAQK--------------- 308
+ + + + Y +G ANVGKS+ INA+ K+ P ++K
Sbjct: 534 LNLRRPTKPIPTYFVGVANVGKSSVINAIAHKLYVPLPPHPESRKVYYTKKAPDGSESVF 593
Query: 309 ---YRP-----------------------IQSAVPGTTLGPIQIDAFL------GGGKLY 336
Y P S++PGTT+ + + L G L+
Sbjct: 594 WRWYTPPNVNQAEMIDIPSRHDKKASKLVTTSSLPGTTVDAVAVRVSLSKGAEKGRAHLF 653
Query: 337 DTPGVHLH-HRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWG 395
DTPG+ H HR + + + L + R Q F ++ G T+F G
Sbjct: 654 DTPGLLPHWHRHSPLTLLQMRRTLIRKFR-NPQCFILVP--------------GNTLFLG 698
Query: 396 GLVRIDLLKVLPETCL-TFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWK 454
GL +D++K L Y + ++ ++ TD++DEF++++LG L PP ++ +
Sbjct: 699 GLCAVDVVKGTSRGMLFMVYTSQKVRNAIINTDRSDEFWREQLGRALDPPGSVEQVGDLR 758
Query: 455 GLD-RERLLEIKFEDTERPASDVAISGLGWIS 485
+ R L E + +RP +D+ GLGW++
Sbjct: 759 LTESRSYLFECYQRNRKRPKADIYFCGLGWVA 790
>gi|339498294|ref|ZP_08659270.1| GTPase YqeH [Leuconostoc pseudomesenteroides KCTC 3652]
Length = 209
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 105/222 (47%), Gaps = 38/222 (17%)
Query: 266 IQKEKKGRDVYILGSANVGKSAFINALLK-KMGERDPAAAMAQKYRPIQSAVPGTTLGPI 324
I + GRDV+++G NVGKS IN ++K + G ++ S PGTTL I
Sbjct: 4 IDNFRDGRDVFVVGVTNVGKSTLINQIIKSRTGIQNLITT---------SRFPGTTLDRI 54
Query: 325 QIDAFLGGGKLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKS 384
+I G +L DTPG+ + A V+ +DL P++ ++ +++ + E
Sbjct: 55 EI-PLEDGQQLIDTPGIIKRDQMAHVLTDKDLKFALPKNEIKPRTYQLNPEQ-------- 105
Query: 385 HGLNGFTIFWGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPP 444
TIF GGL R D + + +T Y +L ++ AD+FY++ G L P
Sbjct: 106 ------TIFIGGLARFDFISG-ARSAITAYFENNLNLHRTKLIGADDFYEQHAGGLLVPA 158
Query: 445 IGKQKAEGWKGLDRERLLEIKFEDTERPASDVAISGLGWISV 486
+ + L++ +F TE SD+ SGLGWISV
Sbjct: 159 PSQ----------LQNLIKHEFSITE--DSDIVFSGLGWISV 188
>gi|110004623|emb|CAK98959.1| conserved hypothetical gtp binding protein [Spiroplasma citri]
Length = 358
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 92/391 (23%), Positives = 162/391 (41%), Gaps = 67/391 (17%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG LQ + + GYV+ T + C RC L+H + +
Sbjct: 7 CSGCGVVLQDTTPNDLGYVETLTQDY-----------CYRCFRLTHYNELVTYN------ 49
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
V A + KL ++D+ D +G+ + L N + L++ K+DL
Sbjct: 50 -----VPAIDFLAKLRQDYHLSWHYFYVLDVYDLDGTRELALEQLLQNNKVTLIINKIDL 104
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVA-SEIQK--EKKGRDVYI 277
+ K + + + ++ E + +VL L ++G+ E+ + +++ D+
Sbjct: 105 VNKLINPHKIITYITELF---RTSVLFSKLEDIILVSGLKNYGLDELWRYIKRQTNDIVF 161
Query: 278 LGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGG-GKLY 336
+GS+N GKS +N+L+K ++ S TTLG I ++ LG K+Y
Sbjct: 162 VGSSNTGKSTLLNSLIKLTNQQQKITV---------SNNLATTLGKIVVN--LGTRHKVY 210
Query: 337 DTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGG 396
DTPG+ H + + AE+ + + L+ +F + E TIF+ G
Sbjct: 211 DTPGIMNKHSLLSYL-AENNKNMITKQLLKPMTFQLNLEQ--------------TIFYEG 255
Query: 397 LVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGL 456
L L L +T FY +L+++ D ++ L T + + + W
Sbjct: 256 LASFSYLTGL-KTSFHFYKNNNLKLHRTKLSNKDYYFTHHLS---TAAVKLKNYQEWT-- 309
Query: 457 DRERLLEIKFEDTERPASDVAISGLGWISVE 487
ER++EI E + I+GLGWIS +
Sbjct: 310 --ERVIEIN----EPGNYSLFIAGLGWISFK 334
>gi|72390111|ref|XP_845350.1| hypothetical protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|72390123|ref|XP_845356.1| hypothetical protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|62360448|gb|AAX80862.1| hypothetical protein, conserved [Trypanosoma brucei]
gi|62360453|gb|AAX80867.1| hypothetical protein, conserved [Trypanosoma brucei]
gi|70801885|gb|AAZ11791.1| hypothetical protein, conserved [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
gi|70801891|gb|AAZ11797.1| hypothetical protein, conserved [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 924
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 117/512 (22%), Positives = 197/512 (38%), Gaps = 155/512 (30%)
Query: 101 CYGCGAPLQTSESDAPGYV---DPDTYELKKKHH-------------------------- 131
C GCGA LQ + ++ GYV D + Y ++K+
Sbjct: 307 CRGCGALLQDQDENSFGYVRKGDVERYIIEKQQKMRARAEYADRMSELQAHWRKHGRRVG 366
Query: 132 ----QFKT--------------VLCGRCRLLSHGHMITAVGGNGGYAGGKQFVSADELRE 173
F T +C RC L N G G ++ SA + +
Sbjct: 367 EEWLDFMTQEEFDAFYRDRNAPFVCHRCHALE----------NLGVEGRRRIWSAPDFTD 416
Query: 174 KLSHLRREKALIVKLVDIVDFNGSFLARIRDLAG----ANPIILVVTKVDLLP------K 223
KL LR +K ++V +VD+ DF G+ + DL G N +I+ V K+D + +
Sbjct: 417 KLRALREKKCVVVLVVDVTDFPGTM---VYDLPGLISMNNDVIIAVNKMDCVRNRSFNYR 473
Query: 224 GTDFNCVGDWVVEATTKKKLNVLSVHLT------------------SSKSLAGIVGVASE 265
G D V E ++ + ++V + ++L V AS
Sbjct: 474 GKDRAVAACLVTERYVRRWVTGIAVQFGLPRHQIKDVIPLSAKRGWNVEALIAAVEEASN 533
Query: 266 IQKEKKGRDV--YILGSANVGKSAFINALLKKMGERDPAAAMAQK--------------- 308
+ + + + Y +G ANVGKS+ INA+ K+ P ++K
Sbjct: 534 LNLRRPTKPIPTYFVGVANVGKSSVINAIAHKLYVPLPPHPESRKVYYTKKAPDGSESVF 593
Query: 309 ---YRP-----------------------IQSAVPGTTLGPIQIDAFL------GGGKLY 336
Y P S++PGTT+ + + L G L+
Sbjct: 594 WRWYTPPNVNQAEMIDIPSRHDKKASKLVTTSSLPGTTVDAVAVRVSLSKGAEKGRAHLF 653
Query: 337 DTPGVHLH-HRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWG 395
DTPG+ H HR + + + L + R Q F ++ G T+F G
Sbjct: 654 DTPGLLPHWHRHSPLTLLQMRRTLIRKFR-NPQCFILVP--------------GNTLFLG 698
Query: 396 GLVRIDLLKVLPETCL-TFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWK 454
GL +D++K L Y + ++ ++ TD++DEF++++LG L PP ++ +
Sbjct: 699 GLCAVDVVKGTSRGMLFMVYTSQKVRNAIINTDRSDEFWREQLGRALDPPGSVEQVGDLR 758
Query: 455 GLD-RERLLEIKFEDTERPASDVAISGLGWIS 485
+ R L E + +RP +D+ GLGW++
Sbjct: 759 LTESRSYLFECYQRNRKRPKADIYFCGLGWVA 790
>gi|324501468|gb|ADY40655.1| Unknown [Ascaris suum]
Length = 802
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 109/241 (45%), Gaps = 36/241 (14%)
Query: 100 SCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGY 159
SC GCGA ++ PG++ + + + + LC RC LL + + V
Sbjct: 242 SCNGCGAKFHCKDASLPGFLPVEIFSKLESTKGPEEGLCRRCYLLEKHNFLLNVN----- 296
Query: 160 AGGKQFVSADELREKLSHLR-REKALIVKLVDIVDFNGSFLARIRDLAG-ANPIILVVTK 217
V + R + HL+ +++ALI+ +VD+ D S A + ++ G P+++V K
Sbjct: 297 ------VCEVDYRSMMCHLKLKQEALIILVVDMSDLPASIYAHLPEIIGDRKPMVVVGNK 350
Query: 218 VDLLP-----------KGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEI 266
VDLLP + T F V D ++ NVL V L S+K+ G+ + + I
Sbjct: 351 VDLLPPDQRSGYLKHFRETLFKAVED----VGFTRRFNVLHVALISAKTGFGVEELITNI 406
Query: 267 QKEKKGR------DVYILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTT 320
+ R D+Y++G N GKS N LL+ + A + Q R S PGTT
Sbjct: 407 HLKWSTRGTAIRNDIYLVGCTNAGKSTLFNTLLQSDLCKVRAVDLVQ--RATTSIWPGTT 464
Query: 321 L 321
+
Sbjct: 465 I 465
Score = 42.0 bits (97), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 36/173 (20%), Positives = 75/173 (43%), Gaps = 21/173 (12%)
Query: 327 DAFLGGGKLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHG 386
+ F G YDTPG + + ++L A+ P+ ++ ++F +
Sbjct: 566 EIFAKGNWCYDTPGTVNEQQVLNLFTLDELIAVVPRKMMQPRTFIMYP------------ 613
Query: 387 LNGFTIFWGGLVRIDLLKV----LPETCLTFYGPKSLQVYMVPTDKADEFYQKELG-VTL 441
G T+ G R+DL++V ++ + + L + ++ T++ + F + LG L
Sbjct: 614 --GDTLLIGATARVDLVRVGTIRRTPVYMSVFASEQLPLNVMKTNEVESFLSRYLGSAAL 671
Query: 442 TPPIGK-QKAEGWKGLDRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSI 493
P G + + L+ + +++ E A+DV +S +GW+ + R I
Sbjct: 672 IAPQGDANRLAQFPQLESQE-MKLNGRGMEEGAADVILSSIGWVCITGERAMI 723
>gi|432961268|ref|XP_004086582.1| PREDICTED: nitric oxide-associated protein 1-like [Oryzias latipes]
Length = 645
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/236 (30%), Positives = 116/236 (49%), Gaps = 37/236 (15%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA + + +D PGY+ + Y+ Q +C RC LL+H H +
Sbjct: 116 CSGCGALMHCTAADVPGYLPSEKYKALLMDGQLGGAICQRCHLLTHHHKALNLQ------ 169
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVV-TKVD 219
++ ++ RE + +R +AL++ +VD++D S + + L GAN I+V+ K+D
Sbjct: 170 -----LTREQYREVVQQIRPHRALVLLIVDLLDLPDSIVPDLPGLVGANKHIVVLGNKID 224
Query: 220 LLPKGTDFNCVGDWVVEATTKKKLN-----------VLSVHLTSSKSLAGIVGVASEIQK 268
LLP G N + K++L+ V +HL S+K+ G+ + S +Q+
Sbjct: 225 LLP-GDSPNYL------QRLKRQLSGYCQQAGFGSQVTDIHLISAKTGYGVEALISSLQR 277
Query: 269 EKKGR-DVYILGSANVGKSAFINALLKKMGERDPAAAMAQK--YRPIQSAVPGTTL 321
K + DVY++GSAN GKS N LL E D + A ++ S PGTTL
Sbjct: 278 SWKYKGDVYLVGSANAGKSTLFNTLL----ESDYCKSRASDVIHKATISPWPGTTL 329
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 76/192 (39%), Gaps = 30/192 (15%)
Query: 335 LYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFW 394
LYDTPG+ H ++ +++ + P + ++F + G ++F
Sbjct: 435 LYDTPGIIKEHDILQLLQEKEVQLVVPTRAVVPRTFVLQP--------------GMSLFV 480
Query: 395 GGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTL--TPPIGKQKAEG 452
G L RID L+ + + V++ DKAD Y+K G L P G ++ +
Sbjct: 481 GALFRIDFLQGEKSCWFSIMASNLVPVHVTSLDKADSIYEKHAGHVLLGVPTGGSERMKA 540
Query: 453 WKGLDRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVH 512
+ L + ++ A DV +S GW++V V +L L VH
Sbjct: 541 FPALVHQD-FSVEGGGYLEAAVDVKLSSAGWVAVTAVE-------------GQQLQLRVH 586
Query: 513 VPKPVEVFVRNP 524
P + +R P
Sbjct: 587 GPPGAGLGLRTP 598
>gi|324501529|gb|ADY40678.1| Unknown [Ascaris suum]
Length = 809
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 111/246 (45%), Gaps = 36/246 (14%)
Query: 100 SCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGY 159
SC GCGA ++ PG++ + + + + LC RC LL + + V
Sbjct: 249 SCNGCGAKFHCKDASLPGFLPVEIFSKLESTKGPEEGLCRRCYLLEKHNFLLNVN----- 303
Query: 160 AGGKQFVSADELREKLSHLR-REKALIVKLVDIVDFNGSFLARIRDLAG-ANPIILVVTK 217
V + R + HL+ +++ALI+ +VD+ D S A + ++ G P+++V K
Sbjct: 304 ------VCEVDYRSMMCHLKLKQEALIILVVDMSDLPASIYAHLPEIIGDRKPMVVVGNK 357
Query: 218 VDLLP-----------KGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEI 266
VDLLP + T F V D ++ NVL V L S+K+ G+ + + I
Sbjct: 358 VDLLPPDQRSGYLKHFRETLFKAVED----VGFTRRFNVLHVALISAKTGFGVEELITNI 413
Query: 267 QKEKKGR------DVYILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTT 320
+ R D+Y++G N GKS N LL+ + A + Q R S PGTT
Sbjct: 414 HLKWSTRGTAIRNDIYLVGCTNAGKSTLFNTLLQSDLCKVRAVDLVQ--RATTSIWPGTT 471
Query: 321 LGPIQI 326
+ ++
Sbjct: 472 ISLLKF 477
Score = 42.0 bits (97), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 36/173 (20%), Positives = 75/173 (43%), Gaps = 21/173 (12%)
Query: 327 DAFLGGGKLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHG 386
+ F G YDTPG + + ++L A+ P+ ++ ++F +
Sbjct: 573 EIFAKGNWCYDTPGTVNEQQVLNLFTLDELIAVVPRKMMQPRTFIMYP------------ 620
Query: 387 LNGFTIFWGGLVRIDLLKV----LPETCLTFYGPKSLQVYMVPTDKADEFYQKELG-VTL 441
G T+ G R+DL++V ++ + + L + ++ T++ + F + LG L
Sbjct: 621 --GDTLLIGATARVDLVRVGTIRRTPVYMSVFASEQLPLNVMKTNEVESFLSRYLGSAAL 678
Query: 442 TPPIGK-QKAEGWKGLDRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSI 493
P G + + L+ + +++ E A+DV +S +GW+ + R I
Sbjct: 679 IAPQGDANRLAQFPQLESQE-MKLNGRGMEEGAADVILSSIGWVCITGERAMI 730
>gi|384485424|gb|EIE77604.1| hypothetical protein RO3G_02308 [Rhizopus delemar RA 99-880]
Length = 259
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 98/208 (47%), Gaps = 22/208 (10%)
Query: 134 KTVLCGRCRLLSHGHMITAVGGNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVD 193
K ++C RC L H H T +Q+ S + L+ K + L+V + DI D
Sbjct: 39 KRIICQRCHELHHYHKSTTESSPEFLRASQQYGSLEFLKTK------QDPLVVAVCDITD 92
Query: 194 FNGSFLARIRDLAGAN---PIILVVTKVDLLPKGTDFN--CVGDWVVEATTKKKL---NV 245
GS L + L N + L K DLLPK + + + DW+V+ L V
Sbjct: 93 LPGS-LGHLPQLLAQNLGARVHLAANKFDLLPKSSRRHEQRIRDWIVQHVKNLGLPTKQV 151
Query: 246 LSVHLTSSKSLAGIVGVASEIQKEKK-GRDVYILGSANVGKSAFINALLKKM-GERDPAA 303
SV L S+K G+ + + +E++ D+Y++G NVGKSA +N + ++ G D
Sbjct: 152 ASVTLISAKKGWGVTSLMHRLDRERRPTDDIYLVGCTNVGKSALVNKFMTQIRGSLDEEG 211
Query: 304 -----AMAQKYRPIQSAVPGTTLGPIQI 326
+ KY SA+PGTT+G I+I
Sbjct: 212 RRLKEQLKAKYMITSSAIPGTTMGTIKI 239
>gi|50365167|ref|YP_053592.1| GTPase [Mesoplasma florum L1]
gi|50363723|gb|AAT75708.1| predicted GTPase [Mesoplasma florum L1]
Length = 365
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 91/413 (22%), Positives = 177/413 (42%), Gaps = 61/413 (14%)
Query: 98 VASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRC-RLLSHGHMITAVGGN 156
++ C GCG Q + + PGYV K +++ C RC ++ ++ +I
Sbjct: 1 MSKCIGCGILKQNKDQNKPGYV-------IKPENEY----CLRCFKIKNYNELI------ 43
Query: 157 GGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVT 216
+QF+ +L+ + + + + ++DI D GS + I + P+ +VV
Sbjct: 44 NQEINAEQFIL--KLKTLIQNDKPKDIEFFYIIDIFDLEGSRVKEIEEAIKRYPVTIVVN 101
Query: 217 KVDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVY 276
K+DLLPK + ++ + K + ++ L +S + + + +K Y
Sbjct: 102 KIDLLPKAVKLAKIRRYITDLFAKSAIYDANIILNTSFKNNFTNSLLN--KIKKTKTKKY 159
Query: 277 ILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLY 336
+GS+NVGKS+ IN+LL + P + ++S TTL IQI ++
Sbjct: 160 FIGSSNVGKSSIINSLL-RTNNLIP--------QIVESKYFNTTLDFIQI-KLSSDDIIF 209
Query: 337 DTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGG 396
DTPG+ + A ++ ED + ++ N F+ N +IF+ G
Sbjct: 210 DTPGIARSNSAANLLDKEDW------------KYIYFNKEVAQNTFQLKPFN--SIFYAG 255
Query: 397 LVRIDLLKVLPE-TCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKG 455
+ +D E F+ K ++++ T A ++Y + + P +
Sbjct: 256 IAWVDFEWESDEINSFHFFNNKEIKLHRTNTKNAFDYYTRN-KENIVPYNLDNNFVKREF 314
Query: 456 LDRERLLEIKFEDTERPASDVAISGLGWISVE---PVRRSIR--NSDINLEST 503
+ E+ + +FE ++ISGLGW + + P++ +I S++ +E+T
Sbjct: 315 IFNEKDINKEFE--------ISISGLGWFNFKVKNPMKVTINIPTSNVEVETT 359
>gi|359403271|ref|ZP_09196178.1| GTPase YqeH [Spiroplasma melliferum KC3]
gi|438118792|ref|ZP_20871437.1| GTP-binding protein YqeH [Spiroplasma melliferum IPMB4A]
gi|357968488|gb|EHJ90997.1| GTPase YqeH [Spiroplasma melliferum KC3]
gi|434155698|gb|ELL44628.1| GTP-binding protein YqeH [Spiroplasma melliferum IPMB4A]
Length = 358
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 92/391 (23%), Positives = 162/391 (41%), Gaps = 67/391 (17%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG LQ + + GYV+ T + C RC L+H + +
Sbjct: 7 CSGCGVVLQDTRPNDLGYVETLTQDY-----------CYRCFRLTHYNELVTYN------ 49
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
V A + KL ++D+ D +G+ + L N + L++ K+DL
Sbjct: 50 -----VPAIDFLAKLRQDYHLNWHYFYVLDVYDLDGTRELALEQLLQNNKVTLIINKIDL 104
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVA-SEIQK--EKKGRDVYI 277
+ K + + + ++ E + +VL L ++G+ E+ + +++ D+
Sbjct: 105 VNKLINPHKIITYISELF---RTSVLFSKLEDIILVSGLKNYGLDELWRYIKRQTNDIVF 161
Query: 278 LGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGG-GKLY 336
+GS+N GKS +N+L+K ++ S TTL I ++ LG K+Y
Sbjct: 162 VGSSNTGKSTLLNSLIKLTNQQQKITV---------SNNLATTLDKIVVN--LGTRHKVY 210
Query: 337 DTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGG 396
DTPG+ H + + AE+ + + L+ +F + SE TIF+ G
Sbjct: 211 DTPGIMNKHSLLSYL-AENNKNMITKQLLKPITFQLNSEQ--------------TIFYEG 255
Query: 397 LVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWKGL 456
L L L +T FY +L+++ D ++ L T + + + W
Sbjct: 256 LASFSYLTGL-KTSFHFYKNNNLKLHRTKLSNKDYYFTHHLS---TTAVKLKNYQEWT-- 309
Query: 457 DRERLLEIKFEDTERPASDVAISGLGWISVE 487
ER++EI E + I+GLGWIS +
Sbjct: 310 --ERVIEIN----EPGNYSLFIAGLGWISFK 334
>gi|196013785|ref|XP_002116753.1| hypothetical protein TRIADDRAFT_60700 [Trichoplax adhaerens]
gi|190580731|gb|EDV20812.1| hypothetical protein TRIADDRAFT_60700 [Trichoplax adhaerens]
Length = 659
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 109/234 (46%), Gaps = 32/234 (13%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKK-----HHQFKTVLCGRCRLLSHGHMITAVGG 155
C GCG+ + D GY+ L++K Q +++C RC L+H + A+
Sbjct: 154 CPGCGSIFHSRNEDKFGYI------LQRKLVDVPASQVSSIICQRCFCLNHYNQ--ALNM 205
Query: 156 NGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGAN-PIILV 214
N D+ R + + ++K +++ +VDI DF GS + D+ G PI+L+
Sbjct: 206 NA---------PEDDWRNHIQKIPKDKCIVMLVVDIFDFPGSIFPNLLDIIGYKVPILLI 256
Query: 215 VTKVD-LLPKGT-DFNCVGDWVVEATTKKKL---NVLSVHLTSSKSLAGIVGVASEI-QK 268
K+D LL G + V E L N++ + L S++ GI V ++ Q
Sbjct: 257 ANKMDVLLEDGPGHIERIQTMVWEGCKNAGLTEGNLVDICLVSARKNQGIKEVVDKVLQH 316
Query: 269 EKKGRDVYILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLG 322
D+++LG NVGKS+ +LL + + P M +Y P S PGTT+G
Sbjct: 317 RPPHGDIFLLGCTNVGKSSLFKSLLDYLYDGKPKTLM--RY-PTISVWPGTTIG 367
>gi|399218226|emb|CCF75113.1| unnamed protein product [Babesia microti strain RI]
Length = 582
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 97/377 (25%), Positives = 169/377 (44%), Gaps = 56/377 (14%)
Query: 162 GKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANP---IILVVTKV 218
G + + E+ +L + R ++I+ ++D+ + + L + +A +N +I V+ K
Sbjct: 189 GFKISHSPEIISQLVYQIRPNSIIIYVLDLTNIEVTMLPELY-IALSNKKLEVIFVLNKS 247
Query: 219 DLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEK---KGRDV 275
D+LP GT V W K NV + ++ S +G E + E + +
Sbjct: 248 DVLPHGTSLPRVKMWS-RRLVKHLGNVHNENVIVCSSTSGYGFDKLEQRLEHYLCNNKYI 306
Query: 276 YILGSANVGKSAFINALLKKMGERDPAAAMAQKYR--PIQSAVPGTTLGPIQIDAFLGGG 333
Y++GS NVGKS +N L +G ++ +++ +S+VPGTTLG + LG G
Sbjct: 307 YVVGSVNVGKSTLVNRFLTYVGYKEIGTIFSKRAVGGITRSSVPGTTLGHVTFG--LGKG 364
Query: 334 -KLYDTPGVHLHHRQAAVV-HAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFT 391
KL DTPG+ + + + ++ + DL A+A + Q VI NE++S
Sbjct: 365 IKLVDTPGIPIGGQMSTILPKSIDLCAIAITKPI--QPVKVIL-----NEYQS------- 410
Query: 392 IFWGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAE 451
+ G L R+D +K + +T Y + L +KA + ++ V+L PP K+ E
Sbjct: 411 LIIGALARVDNVKGC-DLNITCYTSQKLTYKTCKLNKAGDLMKEHGSVSLHPPFFKEDLE 469
Query: 452 G---WKGLDRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELH 508
W + LE+ E + D+ I GLGW++ +G
Sbjct: 470 SLGDWSIYE----LELNGE-----SCDIVIPGLGWLTF---------------YGNGPKT 505
Query: 509 LAVHVPKPVEVFVRNPM 525
+H+P V++F R M
Sbjct: 506 TNIHIPSSVKLFKRPVM 522
>gi|357620128|gb|EHJ72434.1| hypothetical protein KGM_09361 [Danaus plexippus]
Length = 701
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/242 (31%), Positives = 123/242 (50%), Gaps = 25/242 (10%)
Query: 95 NSAVAS--CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITA 152
N++++ C GCGA L ++ PGY+ + Y +K + KT+ C RC L ++
Sbjct: 193 NASISQVRCGGCGALLHCNDPAIPGYLPSEIYT-GRKVEELKTMECQRCHFLKEYNIALD 251
Query: 153 VGGNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGAN-PI 211
V V A+E + L +R K+L++ +VD++DF S I D+ G P+
Sbjct: 252 VN-----------VQAEEYEKLLQSIRYVKSLLLVMVDLLDFPCSLWPGIVDIIGTERPV 300
Query: 212 ILVVTKVDLLPKGT--DFNCVGDWVVEATTKKKL---NVLSVHLTSSKSLAGIVGVASEI 266
I+V KVDLLP + V + ++ K KL N+ + L S+K+ G+ + S +
Sbjct: 301 IIVANKVDLLPGDSVGYLKRVKECLMSEIQKTKLGEANIKYIALISAKTGYGVEDLISAM 360
Query: 267 QKE--KKGRDVYILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPI 324
K KG DV+++GS NVGKS+ NALL+ + A + + R S PGTTL +
Sbjct: 361 FKTWLYKG-DVFLVGSTNVGKSSLFNALLQSDYCKVHAVDIVK--RATVSRWPGTTLNLL 417
Query: 325 QI 326
+
Sbjct: 418 KF 419
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 72/154 (46%), Gaps = 16/154 (10%)
Query: 335 LYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFW 394
LYDTPGV L + +++ E+L P+ +R Q++ + G T F
Sbjct: 506 LYDTPGVVLSDQILSLLTTEELMLAIPRKLIRPQTYYL--------------REGSTFFI 551
Query: 395 GGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTL--TPPIGKQKAEG 452
GGL R+DLL+ T + +SL + + T ADE Y +G L P G ++ E
Sbjct: 552 GGLARVDLLESEDACRFTIFCSESLPITVTETRFADEVYDSFVGTELFAVPTGGDERLER 611
Query: 453 WKGLDRERLLEIKFEDTERPASDVAISGLGWISV 486
W GL R +E + E + D+ +S GW +V
Sbjct: 612 WPGLRRGGDMEFEGEGPDVCCGDIVLSSAGWAAV 645
>gi|348511900|ref|XP_003443481.1| PREDICTED: uncharacterized protein C4orf14 homolog [Oreochromis
niloticus]
Length = 630
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/230 (31%), Positives = 113/230 (49%), Gaps = 25/230 (10%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA L + + PGY+ + Y++ + + C RC LL+H H +
Sbjct: 97 CSGCGAVLHCTAAAVPGYLPNEKYKVLVQEGRLSGATCQRCHLLTHHHKALNLQ------ 150
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVV-TKVD 219
+ D+ R+ + +R KAL++ +VD++D S + + +L G N I+V+ K+D
Sbjct: 151 -----LPKDQYRDVVRQIRPHKALVLLIVDLLDLPDSIIPDLPELVGRNKHIVVLGNKID 205
Query: 220 LLPKGTDFNCVGDWVVEATTKKK-----LNVLSVHLTSSKSLAGIVGVASEIQKEKKGR- 273
LLP G N + + + K V VHL S+K+ GI + S +Q+ K +
Sbjct: 206 LLP-GDSQNYLQRLKRQLSQYCKDAGFGDQVTDVHLISAKTGYGIEELISSLQRSWKYKG 264
Query: 274 DVYILGSANVGKSAFINALLKKMGERDPAAAMAQK--YRPIQSAVPGTTL 321
DVY++GSAN GKS N LL E D + A ++ S PGTTL
Sbjct: 265 DVYLVGSANAGKSTLFNTLL----ESDYCKSRASNVIHKATISPWPGTTL 310
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 42/192 (21%), Positives = 77/192 (40%), Gaps = 30/192 (15%)
Query: 335 LYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFW 394
LYDTPG+ ++H +++ + P + ++F + G ++F
Sbjct: 418 LYDTPGIMKELDILNLLHEQEVRLVVPTQAIVPRTFVLKP--------------GTSLFV 463
Query: 395 GGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTL--TPPIGKQKAEG 452
G L RID L+ + + V++ +KAD Y+K G L P G ++ +
Sbjct: 464 GALARIDFLQGEKSCWFSVVASDRVPVHITSLEKADSIYEKHGGHMLLGVPVGGSERMKE 523
Query: 453 WKGLDRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVH 512
+ L + ++ A+D+ +S GW++V V +L L VH
Sbjct: 524 FPALVPQE-FSLEGRGYLEAAADIKLSSAGWVAVTAVE-------------GDQLLLRVH 569
Query: 513 VPKPVEVFVRNP 524
P+ +R P
Sbjct: 570 GPQAAGFGLRTP 581
>gi|221059269|ref|XP_002260280.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
knowlesi strain H]
gi|193810353|emb|CAQ41547.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
knowlesi strain H]
Length = 824
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 86/382 (22%), Positives = 167/382 (43%), Gaps = 62/382 (16%)
Query: 164 QFVSAD--ELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANP---IILVVTKV 218
++V D E+ L + K+L++ L+DI + + L + + N II +V KV
Sbjct: 372 KYVEGDRNEVMNNLIKKMKRKSLVLYLIDITNIENTILPELY-IGCKNKDINIIWLVNKV 430
Query: 219 DLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEK-------- 270
D LPK T+ V W + K + H+ ++ + + +E+
Sbjct: 431 DCLPKSTNLEMVKIWFRNLVRQIK----NTHINDLIFISALKFYNLNMLEERMKYYVDLE 486
Query: 271 KGRDVYILGSANVGKSAFINALLKKMGERDPAAAMAQKYR--PIQSAVPGTTL--GPIQI 326
KG D+YI+G NVGKS+F+N+ LK + + +++ + S +P TTL Q+
Sbjct: 487 KGTDIYIVGCVNVGKSSFVNSFLKYINYKHIGDIYSKRKKGGVTTSNIPYTTLNYNTFQL 546
Query: 327 DAFLGGGKLYDTPGVHLHHRQAAVVHAE-DLPALAPQSRLRGQSFAVISETETNNEFKSH 385
+ K+ DT G+ ++ +++++ + DL +++ R++ ++ + +
Sbjct: 547 KKNI---KIIDTMGIPTKYQYSSILYKDIDLNSISINKRIQPFTYKLKENS--------- 594
Query: 386 GLNGFTIFWGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPI 445
+I G L I+L+ +TFY + +++ ++K ++F +K+ L PP
Sbjct: 595 -----SIILGSLCYINLI-YGSFALVTFYISNRVTIHICRSEKVEQFLEKKKCSFLYPPH 648
Query: 446 GKQKAEGWKGLDRE--RLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLEST 503
+Q K + ++ FE + D+ IS L W SV S
Sbjct: 649 VEQDFHLLKPFVKHTVKVFGKDFESID----DIVISDLCWFSV---------------SG 689
Query: 504 SGELHLAVHVPKPVEVFVRNPM 525
G ++ PK V+++ R M
Sbjct: 690 RGVKVFEIYAPKNVKIYRRPSM 711
>gi|157117918|ref|XP_001653100.1| hypothetical protein AaeL_AAEL008086 [Aedes aegypti]
gi|108875941|gb|EAT40166.1| AAEL008086-PA [Aedes aegypti]
Length = 697
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 89/297 (29%), Positives = 138/297 (46%), Gaps = 38/297 (12%)
Query: 36 IVCKSTLSPETQFESDGAGAAAPTRGDRFLELQKAKEAAKVVVRDSKKKRKKKDKVLKVN 95
+V K +P + + D PT GD + + +E + K+ V +
Sbjct: 129 LVRKVERAPREELQED----TTPTTGDWMSDYEYYEEDEDDDRKSFYGTPDPKEPVSNI- 183
Query: 96 SAVASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGG 155
C GCGA LQ +E PGY+ ++ + K Q +T +C RC L + + V
Sbjct: 184 ----PCGGCGALLQCAEPSIPGYLPSQLFKGRSK-QQLQTSICQRCHFLKNYNTAINVT- 237
Query: 156 NGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVV 215
VS D+ E +S +R +KAL++ LVD++DF S + ++ G + I+VV
Sbjct: 238 ----------VSPDDYVEMISSIRDKKALVLLLVDLLDFPCSIWPGLSEILGPDRSIIVV 287
Query: 216 -TKVDLLPKGTDFNCVG--DWVVEATTK-------KKLNVLSVHLTSSKSLAGIVGVASE 265
KVDLLP+ +C G D + TK K N+ V L S+ + G+ + ++
Sbjct: 288 GNKVDLLPR----DCPGYLDNIRNNLTKTFLEAGFTKNNIKHVSLISATTGYGVEQLITK 343
Query: 266 IQKEKKGR-DVYILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTL 321
I R DVY++G NVGKS+ NALL+ + A+ + Q R PGTTL
Sbjct: 344 IHNVWGTRGDVYLVGCTNVGKSSLFNALLRSDLCKVKASDLVQ--RATACPWPGTTL 398
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 65/160 (40%), Gaps = 16/160 (10%)
Query: 329 FLGGGKLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLN 388
F+ YDTPGV + ++ ++L P+ +R +++ + +
Sbjct: 490 FINSKWCYDTPGVVQPEQITNLLTTDELLLTLPKQMIRPRAYLMKT-------------- 535
Query: 389 GFTIFWGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTL--TPPIG 446
G T+F GL R+D ++ T + Y +L + T A E YQ LG P
Sbjct: 536 GLTLFLAGLGRLDYIEGPESTRVLLYASPNLPTLICDTAHAHEIYQNLLGTEYLRVPRAD 595
Query: 447 KQKAEGWKGLDRERLLEIKFEDTERPASDVAISGLGWISV 486
+ W L + + E+ +DV +S GWI++
Sbjct: 596 PDRLAKWPALQAGPDILLYGEEKHISVADVVLSSAGWIAI 635
>gi|157117920|ref|XP_001653101.1| hypothetical protein AaeL_AAEL008095 [Aedes aegypti]
gi|108875942|gb|EAT40167.1| AAEL008095-PA [Aedes aegypti]
Length = 689
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 89/297 (29%), Positives = 138/297 (46%), Gaps = 38/297 (12%)
Query: 36 IVCKSTLSPETQFESDGAGAAAPTRGDRFLELQKAKEAAKVVVRDSKKKRKKKDKVLKVN 95
+V K +P + + D PT GD + + +E + K+ V +
Sbjct: 129 LVRKVERAPREELQED----TTPTTGDWMSDYEYYEEDEDDDRKSFYGTPDPKEPVSNI- 183
Query: 96 SAVASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGG 155
C GCGA LQ +E PGY+ ++ + K Q +T +C RC L + + V
Sbjct: 184 ----PCGGCGALLQCAEPSIPGYLPSQLFKGRSK-QQLQTSICQRCHFLKNYNTAINVT- 237
Query: 156 NGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVV 215
VS D+ E +S +R +KAL++ LVD++DF S + ++ G + I+VV
Sbjct: 238 ----------VSPDDYVEMISSIRDKKALVLLLVDLLDFPCSIWPGLSEILGPDRSIIVV 287
Query: 216 -TKVDLLPKGTDFNCVG--DWVVEATTK-------KKLNVLSVHLTSSKSLAGIVGVASE 265
KVDLLP+ +C G D + TK K N+ V L S+ + G+ + ++
Sbjct: 288 GNKVDLLPR----DCPGYLDNIRNNLTKTFLEAGFTKNNIKHVSLISATTGYGVEQLITK 343
Query: 266 IQKEKKGR-DVYILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTL 321
I R DVY++G NVGKS+ NALL+ + A+ + Q R PGTTL
Sbjct: 344 IHNVWGTRGDVYLVGCTNVGKSSLFNALLRSDLCKVKASDLVQ--RATACPWPGTTL 398
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 77/198 (38%), Gaps = 29/198 (14%)
Query: 329 FLGGGKLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLN 388
F+ YDTPGV + ++ ++L P+ +R +++ + +
Sbjct: 490 FINSKWCYDTPGVVQPEQITNLLTTDELLLTLPKQMIRPRAYLMKT-------------- 535
Query: 389 GFTIFWGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTL--TPPIG 446
G T+F GL R+D ++ T + Y +L + T A E YQ LG P
Sbjct: 536 GLTLFLAGLGRLDYIEGPESTRVLLYASPNLPTLICDTAHAHEIYQNLLGTEYLRVPRAD 595
Query: 447 KQKAEGWKGLDRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGE 506
+ W L + + E+ +DV +S GWI+ INL + S E
Sbjct: 596 PDRLAKWPALQAGPDILLYGEEKHISVADVVLSSAGWIA------------INLPADS-E 642
Query: 507 LHLAVHVPKPVEVFVRNP 524
P+ ++VR P
Sbjct: 643 AVFRAWTPERRGIYVRQP 660
>gi|156083447|ref|XP_001609207.1| hypothetical protein [Babesia bovis T2Bo]
gi|154796458|gb|EDO05639.1| conserved hypothetical protein [Babesia bovis]
Length = 579
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 91/346 (26%), Positives = 139/346 (40%), Gaps = 50/346 (14%)
Query: 167 SADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGAN---PIILVVTKVDLLPK 223
+A E+ L + L+ +VDI + + L + +A N +I V+ KVD+LP
Sbjct: 228 AAPEVISNLMTRIKSDGLVFFVVDITNVEATALPELY-IALRNKSIEVIWVINKVDVLPY 286
Query: 224 GTDFNCVGDW----VVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILG 279
TD + W V K +V V T + E K + RD Y++G
Sbjct: 287 RTDLPEIKRWLRSIVRHIGNAKNSDVFMVSSTKGIGFDSLEKRLKESIKIGQARDTYVVG 346
Query: 280 SANVGKSAFINALLKKMGERDPAAAMAQKYRP-------------IQSAVPGTTLGPIQI 326
+ N GKS F+N LL + R A+ + K +SA PG+TLG +
Sbjct: 347 AVNTGKSTFVNRLLHYIHYRYVASTLMTKCSDAGTLNIKRGVGGVTRSATPGSTLGFVDF 406
Query: 327 DAFLGGGKLYDTPGVHLHHRQAAVVHA-EDLPALAPQSRLRGQSFAVISETETNNEFKSH 385
F GG L DTPG+ + ++ D+ ++A R I T E
Sbjct: 407 GLF-GGFNLVDTPGIPVASTVTQLLTTPADMFSIAMNKR--------IDPTVIRME---- 453
Query: 386 GLNGFTIFWGGLVRIDLLK--VLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTP 443
G ++ G L+RID ++ V C Y + + T A + + + GV + P
Sbjct: 454 --PGQSLLLGALIRIDFVEGHVAIVHC---YISSGVTMETCRTVAASDIMKYKAGVKIYP 508
Query: 444 PIGKQKAEG---WKGLDRERLLEIKFEDTERPASDVAISGLGWISV 486
P KQ E W E F P D+ + GLGW+S+
Sbjct: 509 PHSKQNYEKLLPWSTYRVELNCNAAF-----PLDDIVLPGLGWLSI 549
>gi|84994782|ref|XP_952113.1| hypothetical protein [Theileria annulata strain Ankara]
gi|65302274|emb|CAI74381.1| hypothetical protein, conserved [Theileria annulata]
Length = 620
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 108/442 (24%), Positives = 175/442 (39%), Gaps = 68/442 (15%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
CYGCG LQ + + GYV Y H+ C RC LS + + G
Sbjct: 154 CYGCGVNLQFANINKRGYVQECYY-----HNDLAK--CERCSSLSSDIKSSLIKNTSGVD 206
Query: 161 GGK-QFVSADELREKLSHL-----------RREKALIVKLVDIVDFNGSF----LARIRD 204
G VS + +RE S +R + I+ ++D+VD + F + + R+
Sbjct: 207 GNNLNLVSENLIREASSETINIVRNMLRIKKRRRITILYIIDVVDPHIEFKLLEIIKQRE 266
Query: 205 LAGANPIILVVTKVDLLPKGTDFNCVGDWVVEATTKKKLNVL-SVHL--TSSKSLAGIVG 261
G L++ K+DLLPK V + K+++L S H+ SSK +
Sbjct: 267 EIGGIRFYLILNKIDLLPKYNRDELVQ--FFKKMINSKVDLLKSKHIFTISSKFKKHVSE 324
Query: 262 VASEIQKEKK--GRDVYILGSANVGKSAFINALLKKMGERDPAAAMAQKY---------- 309
+ S I +E K G + +G N GKS IN L + + + A+
Sbjct: 325 LMSVILEEAKRLGNQILFIGPTNSGKSTLINLLRSSLKSKSRSLKNAKSTNNVIMNGSNS 384
Query: 310 ----RPIQSAVPGTTLGPIQIDAFLGGG-KLYDTPGVHLHHRQAAVVHAEDLPALAPQSR 364
R S +PGTTLG I I LG +YDTPG+ + + + V+ +L + Q+
Sbjct: 385 LMGKRLTSSIIPGTTLGVINIS--LGDNLSIYDTPGIFVPNSLISHVNGINLKDIITQNI 442
Query: 365 LRGQSFAVISETETNNEFKSH---GLNGFTIFWGGLVRIDLLKVLPETCLTFYGPKSLQV 421
+ + T + F SH G+++ VRID+ + Y L++
Sbjct: 443 CPNTPIRLKKGSLTVSLFSSHIDIVTIGYSMLIDKYVRIDMTSG-RDVFFKCYFSDKLKL 501
Query: 422 YMVPTDKADEFYQKE-----LGVTLTPPIGKQKAEGWKGLDR------------ERLLEI 464
++ PT K ++F K L T + G+D R + I
Sbjct: 502 HIKPTHKINQFLNKHYSDQFLHYPTTQHTSITSDDTVNGVDNVNSNNSTNDNWVMRRMNI 561
Query: 465 KFEDTERPASDVAISGLGWISV 486
+ D+ I GLG++++
Sbjct: 562 ILNGWDNATCDLCIKGLGFLTI 583
>gi|428170399|gb|EKX39324.1| hypothetical protein GUITHDRAFT_114525 [Guillardia theta CCMP2712]
Length = 574
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 100/197 (50%), Gaps = 33/197 (16%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITA--VGGNGG 158
C GCG LQ+S S APGYV P++ ++K V+C RC L H + N
Sbjct: 55 CPGCGCKLQSSSSSAPGYV-PESKTGQEK------VVCVRCYNLQHYGKVNPDLTAQNAK 107
Query: 159 YAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKV 218
Y VS R L+ L+++ ++ +VDI DF+G+FL ++++ G + + V +
Sbjct: 108 YTE----VSPAAFRSILAPLKKQSCIVCYVVDIFDFHGTFLPDLKEIVGRDRVKQWVRE- 162
Query: 219 DLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQ--KEKKGRDVY 276
+ +GD++ ++ V L S+ S G+ + +++ K+ +++Y
Sbjct: 163 -------EAKILGDYL----------IVDVVLISAASGYGVKLLEQQLRAWSSKRKQNIY 205
Query: 277 ILGSANVGKSAFINALL 293
I+G+ANVGKS +N LL
Sbjct: 206 IVGAANVGKSTLVNRLL 222
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 100/213 (46%), Gaps = 34/213 (15%)
Query: 314 SAVPGTTLGPIQIDAFLGGG-KLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAV 372
S++PGTTL ++D LG G ++DTPG+ + + ++ E+L PQ ++ ++ +
Sbjct: 348 SSLPGTTLDLTELD--LGNGYSMFDTPGLIVPSQLTNMLTMEELAVALPQHKVEHVTYRI 405
Query: 373 ISETETNNEFKSHGLNGFTIFWGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEF 432
+ G + G VRI+LL P T + + +++ T KA+EF
Sbjct: 406 PA--------------GTCVHLGAFVRIELLTDKP-FFFTIFVSNLVTIHVGKTSKAEEF 450
Query: 433 YQKELGVTLTPPIGKQKAEGWKGLDRERLLEIKFEDTERPASDVAISGLGWISVEPVRRS 492
++G L PP+ ++ + L+ E +L+ + + +D+ I+G GW+++ +
Sbjct: 451 RWAQVGRMLKPPMTSERLKAVGELE-ETILDDYGDSWDVACTDIVIAGFGWVALTGI--- 506
Query: 493 IRNSDINLESTSGELHLAVHVPKPVEVFVRNPM 525
G + + V PK V V R+P+
Sbjct: 507 ------------GPVRVRVLAPKGVGVTRRSPL 527
>gi|309808042|ref|ZP_07701961.1| GTP-binding family protein [Lactobacillus iners LactinV 01V1-a]
gi|308168725|gb|EFO70824.1| GTP-binding family protein [Lactobacillus iners LactinV 01V1-a]
Length = 155
Score = 79.0 bits (193), Expect = 7e-12, Method: Composition-based stats.
Identities = 51/153 (33%), Positives = 73/153 (47%), Gaps = 12/153 (7%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG+ LQ +S GY+ P + K +V C RC L H + IT V N
Sbjct: 8 CIGCGSILQDKDSKLSGYM-PHSAFNKMIQEPDTSVYCQRCFRLRHYNEITPVNENN--- 63
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
D+ L+ L +KALIV +VD+ DFN S +A + G N +LV KVDL
Sbjct: 64 --------DDFLRLLNSLGNKKALIVNVVDLFDFNNSLIASLDRFIGDNEFVLVGNKVDL 115
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSS 253
PK + + + DW+ + + L + L S+
Sbjct: 116 FPKNSKESKIKDWMRQEANRNGLFPKKIFLLSA 148
>gi|170033577|ref|XP_001844653.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167874621|gb|EDS38004.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 687
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 72/233 (30%), Positives = 117/233 (50%), Gaps = 22/233 (9%)
Query: 96 SAVASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGG 155
S+VA C GCGA +Q +E PGY+ ++ K K Q ++ +C RC L + + V
Sbjct: 178 SSVA-CGGCGAFMQCAEPSIPGYLPSQLFKGKHK-KQLQSTICQRCHFLKNYNTAINVT- 234
Query: 156 NGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVV 215
VS ++ + +S +R ++AL++ +VD++DF S + D+ G I+VV
Sbjct: 235 ----------VSPEDYVQMISSIRDKRALVLLMVDLLDFPCSIWPGLSDILGPKRSIIVV 284
Query: 216 -TKVDLLPKGTD--FNCVGDWVVEATTK---KKLNVLSVHLTSSKSLAGIVGVASEIQKE 269
KVDLLP+ + + + D + A ++ N+ V L S+ + G+ + +++
Sbjct: 285 GNKVDLLPRDSPGYLDTIRDTLTRAIVSSGFERNNIRHVALVSAATGFGVEELITKLHNV 344
Query: 270 KKGR-DVYILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTL 321
R DVY++G NVGKS NALL + A + Q R PGTTL
Sbjct: 345 WGSRGDVYLVGCTNVGKSTLFNALLASDLCKVQATDLVQ--RATACPWPGTTL 395
Score = 45.1 bits (105), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 69/177 (38%), Gaps = 22/177 (12%)
Query: 318 GTTLGPI-----QIDAFLGGGKLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAV 372
GT PI + D + YDTPGV + ++ ++L P+ +R +++ +
Sbjct: 471 GTAQSPILTLNEKSDTYANSKWCYDTPGVIQPDQITNLLTTDELLQTLPKQMIRPRAYLL 530
Query: 373 ISETETNNEFKSHGLNGFTIFWGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEF 432
G ++F GL R+D L+ P T + Y SL + T A +
Sbjct: 531 KP--------------GLSLFLAGLGRLDYLEGPPSTRILLYSSPSLPTLICETTAATQI 576
Query: 433 YQKELGVTL--TPPIGKQKAEGWKGLD-RERLLEIKFEDTERPASDVAISGLGWISV 486
Y LG P + W L +L ++ +D+ +S GWI+V
Sbjct: 577 YANLLGTEFLQIPGPDPNRLSRWPALKPSPDILLTGVQEKHISVADILLSSGGWIAV 633
>gi|302845529|ref|XP_002954303.1| hypothetical protein VOLCADRAFT_118673 [Volvox carteri f.
nagariensis]
gi|300260508|gb|EFJ44727.1| hypothetical protein VOLCADRAFT_118673 [Volvox carteri f.
nagariensis]
Length = 722
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 100/376 (26%), Positives = 164/376 (43%), Gaps = 73/376 (19%)
Query: 136 VLCGRCRLLSHGHMITAVGGNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFN 195
VLC RC L+H + + G A F + ++ K+ + KA+++ +VD+ DF+
Sbjct: 342 VLCQRCYWLTHAGKLKSYEGE---AALPTFDLSKKVGRKIHLQKDRKAVVLCVVDLWDFD 398
Query: 196 GSFLARIRDLAGANP-------------IILVVTKVDLLPKGTDFNCVGDWVVEATTKKK 242
GS L R A P +++ K DLLP V WV T K+
Sbjct: 399 GS-LPRQAISALLPPGSGDEAPQELKFKLMVAANKFDLLPSVATVPRVQQWV--RTRLKQ 455
Query: 243 LNVLSVHLTSSKSLAGIVGVASEIQKEKKG--RDVYILGSANVGKSAFINALLKKMGERD 300
+ S A +GV ++ G D++++G+ N GKS+ I A+ K++ D
Sbjct: 456 AGLPHADKVFMVSAAKGLGVKDMDIRQALGFRGDLWVVGAQNAGKSSLIRAM-KRLAGTD 514
Query: 301 PAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGK--LYDTPGVHLHHRQAAVVHAEDLPA 358
K P + VPGTTLG +Q+ G K +DTPGV H+ + ++ E
Sbjct: 515 ------GKGDPTVAPVPGTTLGLLQVPGIPLGPKHRTFDTPGVPHTHQLTSHLNPE---- 564
Query: 359 LAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWG-GLVRIDLLKVLPETC-LTFYGP 416
V+ + G ++ G GL R+D++ +T LT +
Sbjct: 565 -------------VVKKP------------GHSVLLGAGLARVDVVSAPGQTLYLTVFVS 599
Query: 417 KSLQVYMVPTDKADE----FYQKELGVTLTPPIGKQKAEGWKGLDRERLLEIKFEDTE-- 470
+ ++M T+ AD+ Q L L+PP + E L + + +E++ E T+
Sbjct: 600 AHVNLHMGKTEGADDKVKSLTQNGL---LSPP---ESPEEVAALPKWQPVEVEVEGTDWS 653
Query: 471 RPASDVAISGLGWISV 486
R DVA++GLGW+ V
Sbjct: 654 RSTVDVAVAGLGWVGV 669
>gi|398019280|ref|XP_003862804.1| hypothetical protein, conserved [Leishmania donovani]
gi|322501035|emb|CBZ36112.1| hypothetical protein, conserved [Leishmania donovani]
Length = 918
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 125/539 (23%), Positives = 189/539 (35%), Gaps = 176/539 (32%)
Query: 101 CYGCGAPLQTSESDAPGYVDP---DTY-----ELKKKHHQF------------------- 133
C GCGA LQ DA GYV P + Y E + H++
Sbjct: 281 CPGCGALLQNLSEDAFGYVRPGEIEKYVAQRNEKAQLRHEYAARMAELQAHWAKHGRHVG 340
Query: 134 --------------------KTVLCGRCRLLSHGHMITAVGGNGGYAGGKQFVSADELRE 173
+ C RC L N G G ++ SA + +
Sbjct: 341 EEWLDFMTQEEFDAFYRDTPRPFTCHRCHALE----------NLGVEGRRKVWSAPDFTD 390
Query: 174 KLSHLRREKALIVKLVDIVDFNGSFLARIRDLAG----ANPIILVVTKVDLLPKGTDFN- 228
+L L+ +K ++V +VDI DF GS + DL G N +I+ V K+D + + FN
Sbjct: 391 QLRALKEKKCVVVLVVDITDFPGSM---VYDLPGLISMNNSVIIAVNKMDCI-RNRSFNY 446
Query: 229 ---------C------VGDWVVEATTKKKL---NVLSVHLTSSKSLAGIVGVASEIQ--- 267
C V WV++ + L + V S+K GI + S I+
Sbjct: 447 ASKDRSVAACLVSESYVRRWVMDIAVQFGLPQHQIKKVVPLSAKRGWGITHLISAIEDAA 506
Query: 268 -----KEKKGRDVYILGSANVGKSAFINALLKKMGERDPAAAMAQK-------------- 308
+ K Y +G ANVGKS+ INA+ + P ++K
Sbjct: 507 NLNLRRPHKPLPTYFVGVANVGKSSVINAMAHALYVPQPPHPESRKVYYTKTDAQGKNAV 566
Query: 309 ----YRPIQ-----------------------SAVPGTTLGPIQIDAFLG---------- 331
Y P S++PGTT+ + LG
Sbjct: 567 FWRWYTPPNVNQAEMLDIRGRHDKKASKLMTVSSLPGTTVAVNAVRLSLGPTAHTAKQER 626
Query: 332 ---------GGKLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEF 382
GK D G + D P L P R + +F
Sbjct: 627 QRLSEGATAPGKADDVAGTQ--------TYIYDTPGLLPHWHQRSLLTLLQMRRTLIRKF 678
Query: 383 KSHG----LNGFTIFWGGLVRIDLLKVLPETCLTF-YGPKSLQVYMVPTDKADEFYQKEL 437
++ L G T+F GGL +D+++ P L Y + ++ +V T ++D F++++L
Sbjct: 679 RNPQCFLLLPGHTLFLGGLAAVDVVRGPPRGLLFLVYTSQKVRNAIVNTVQSDAFWREQL 738
Query: 438 GVTLTPPIGKQK---------AEGWKGLDRER--LLEIKFEDTERPASDVAISGLGWIS 485
G L PP ++ A G L R L E RP +D+ + GLGW S
Sbjct: 739 GKALDPPGSYEQLLPLDDLSTAAGPPRLSETRSYLFECYGRHRRRPKADLYVCGLGWTS 797
>gi|350546553|ref|ZP_08915935.1| ATP/GTP-binding protein [Mycoplasma iowae 695]
gi|349503893|gb|EGZ31454.1| ATP/GTP-binding protein [Mycoplasma iowae 695]
Length = 362
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/342 (21%), Positives = 136/342 (39%), Gaps = 51/342 (14%)
Query: 92 LKVNSAVASCYGCGAPLQTSESDAPGYV-DPDTYELKKKHHQFKTVLCGRCRLLSHGHMI 150
+K N C GCG +++ ++P YV +P KT+ C RC + H I
Sbjct: 1 MKSNYYNKKCKGCGQFF-SNDINSPSYVMNPTE----------KTLYCKRCFQIKHYKKI 49
Query: 151 TAVGGNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANP 210
N K + ++ + + ++ +VD+ D + + + +D
Sbjct: 50 -----NNDNVDEKHIIDV------INKIDIKDNFLIIIVDLFDIYNTLIEQYKDYRNK-- 96
Query: 211 IILVVTKVDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEK 270
I+VV K++ LPK + N + + + K + + L S I + I+
Sbjct: 97 -IIVVNKLNALPKKFNSNITLEKISKIVDSKNILYKDIILYDSIEHININRIYKYIKDAS 155
Query: 271 KGRDV-YILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAF 329
K + + Y+ G N GKS+ INALL+ E++ S TTL +I
Sbjct: 156 KNKKITYVFGKTNTGKSSLINALLRLNKEKELLTV---------SPYKNTTLNLSKI--L 204
Query: 330 LGGGKLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNG 389
+ + DTPG+ H V +D+ L + ++F + + NN+
Sbjct: 205 IEKNTIIDTPGIPNHDSILNFVSNKDIDKLNNNIKFVSKNFQI----KNNNQ-------- 252
Query: 390 FTIFWGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADE 431
T F GL ++ + + FY ++++V+ DK D
Sbjct: 253 -TYFIEGLCYLNAKSIYENASINFYVKQNIKVHSTKFDKIDN 293
>gi|402593995|gb|EJW87922.1| hypothetical protein WUBG_01170 [Wuchereria bancrofti]
Length = 797
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 115/248 (46%), Gaps = 32/248 (12%)
Query: 94 VNSAVASCYGCGAPLQTSESDAPGYVDPDTY-ELKKKHHQFKTVLCGRCRLLSHGHMITA 152
V S+ C CGA ++ PG+V + + +L+ +HQ LC RC +L + +
Sbjct: 247 VPSSNKPCGACGAKFHCRDASLPGFVPAEIFLKLEDYNHQ----LCRRCYMLKRHNFLLN 302
Query: 153 VGGNGGYAGGKQFVSADELREKLSHLR-REKALIVKLVDIVDFNGSFLARIRDLAG-ANP 210
V V + + HL+ +++ALI+ +VD+ D GS + + + G P
Sbjct: 303 VN-----------VCEVDYHSMMKHLKLKQEALIILVVDMCDLPGSIYSELPKIIGYQKP 351
Query: 211 IILVVTKVDLLPKGTD------FNCVGDWVVEAT-TKKKLNVLSVHLTSSKSLAGIVGVA 263
+I+V KVDLLP F V +++ T N+L + L S+K+ G+ +
Sbjct: 352 MIVVGNKVDLLPPDAHSGFLRHFRQVLHGLLKETGFVDNFNILHMSLISAKTGYGVEDLI 411
Query: 264 SEI-----QKEKKGRDVYILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPG 318
+ I ++ D+Y++G N GKS NALL+ + A + + R + PG
Sbjct: 412 TNIFLRFSTRDTLRNDMYLVGCTNAGKSTLFNALLQSDLCKVRAVDLVE--RAATTPWPG 469
Query: 319 TTLGPIQI 326
TT+ ++
Sbjct: 470 TTISLLKF 477
>gi|47212015|emb|CAF95421.1| unnamed protein product [Tetraodon nigroviridis]
Length = 609
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 113/229 (49%), Gaps = 23/229 (10%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA L + PGY+ + +++ + + C RC LLSH H
Sbjct: 55 CPGCGAVLHCTALAVPGYLPSEKFKVLLQEGRLGGATCQRCHLLSHHHKAL--------- 105
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVV-TKVD 219
K V+A++ R + +R +AL++ +VD++D S + + +L G N ++V+ KVD
Sbjct: 106 --KLQVTAEQYRAVVQSIRPLRALVLLIVDLLDVPDSIVPDLAELVGTNKHVVVLGNKVD 163
Query: 220 LLPKGTDFNC------VGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKE-KKG 272
LLP + + + + EA + V VHL S+K+ G+ + S +Q+ K
Sbjct: 164 LLPADSPNHLQRIRRRLSGYCREAGFGDQ--VADVHLISAKTGYGVEALVSSLQRSWKYN 221
Query: 273 RDVYILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTL 321
DVY++G AN GKS N LL+ + A+ + +K S PGTTL
Sbjct: 222 GDVYLVGVANAGKSTLFNTLLESDYCKSRASEVTRKA--TISPWPGTTL 268
>gi|312084638|ref|XP_003144356.1| hypothetical protein LOAG_08778 [Loa loa]
Length = 637
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 110/247 (44%), Gaps = 30/247 (12%)
Query: 94 VNSAVASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAV 153
V S+ C CGA ++ PG+V + + K + + LC RC +L + + V
Sbjct: 235 VPSSNKLCGACGANFHCRDASLPGFVPAEIF---LKLNDYNDQLCRRCYMLKKHNFLLNV 291
Query: 154 GGNGGYAGGKQFVSADELREKLSHLR-REKALIVKLVDIVDFNGSFLARIRDLAG-ANPI 211
V + R + HL+ +++ALI+ +VD+ D GS + + + G P+
Sbjct: 292 N-----------VCEVDYRSMMKHLKLKQEALIILVVDMCDLPGSIYSELPKIIGYQKPM 340
Query: 212 ILVVTKVDLLPKGTDF-------NCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVAS 264
I+V KVDLLP + + + E N+L L S+K+ G+ + +
Sbjct: 341 IVVGNKVDLLPPDARRGFLRHFRQILHNLLRETGFVDNFNILHTSLISAKTGYGVEDLIT 400
Query: 265 EI-----QKEKKGRDVYILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGT 319
I ++ D+Y++G N GKS NALL+ + A + + R + PGT
Sbjct: 401 NIYLRFSTRDTLRNDMYLVGCTNAGKSTLFNALLQSDLCKVRAVDLVE--RAATTPWPGT 458
Query: 320 TLGPIQI 326
T+ ++
Sbjct: 459 TISLLKF 465
>gi|309803308|ref|ZP_07697405.1| GTP-binding family protein [Lactobacillus iners LactinV 11V1-d]
gi|308164816|gb|EFO67066.1| GTP-binding family protein [Lactobacillus iners LactinV 11V1-d]
Length = 156
Score = 77.0 bits (188), Expect = 2e-11, Method: Composition-based stats.
Identities = 50/153 (32%), Positives = 72/153 (47%), Gaps = 12/153 (7%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG+ LQ +S GY+ P + K +V C RC L H + IT V N
Sbjct: 8 CIGCGSILQDKDSKLSGYM-PHSAFNKMIQEPDTSVYCQRCFRLRHYNEITPVNENN--- 63
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
D+ L+ L +KALIV +VD+ DFN S + + G N +LV KVDL
Sbjct: 64 --------DDFLRLLNSLGNKKALIVNVVDLFDFNNSLITSLDRFIGDNEFVLVGNKVDL 115
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSS 253
PK + + + DW+ + + L + L S+
Sbjct: 116 FPKNSKESKIKDWMRQEANRNGLFPKKIFLLSA 148
>gi|393906591|gb|EJD74330.1| hypothetical protein LOAG_18344 [Loa loa]
Length = 791
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 110/247 (44%), Gaps = 30/247 (12%)
Query: 94 VNSAVASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAV 153
V S+ C CGA ++ PG+V + + K + + LC RC +L + + V
Sbjct: 235 VPSSNKLCGACGANFHCRDASLPGFVPAEIF---LKLNDYNDQLCRRCYMLKKHNFLLNV 291
Query: 154 GGNGGYAGGKQFVSADELREKLSHLR-REKALIVKLVDIVDFNGSFLARIRDLAG-ANPI 211
V + R + HL+ +++ALI+ +VD+ D GS + + + G P+
Sbjct: 292 N-----------VCEVDYRSMMKHLKLKQEALIILVVDMCDLPGSIYSELPKIIGYQKPM 340
Query: 212 ILVVTKVDLLPKGTDF-------NCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVAS 264
I+V KVDLLP + + + E N+L L S+K+ G+ + +
Sbjct: 341 IVVGNKVDLLPPDARRGFLRHFRQILHNLLRETGFVDNFNILHTSLISAKTGYGVEDLIT 400
Query: 265 EI-----QKEKKGRDVYILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGT 319
I ++ D+Y++G N GKS NALL+ + A + + R + PGT
Sbjct: 401 NIYLRFSTRDTLRNDMYLVGCTNAGKSTLFNALLQSDLCKVRAVDLVE--RAATTPWPGT 458
Query: 320 TLGPIQI 326
T+ ++
Sbjct: 459 TISLLKF 465
>gi|410931221|ref|XP_003978994.1| PREDICTED: LOW QUALITY PROTEIN: nitric oxide-associated protein
1-like [Takifugu rubripes]
Length = 696
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 114/232 (49%), Gaps = 19/232 (8%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA L + + PGY+ + +++ + C RC LL+H H ++
Sbjct: 165 CPGCGAVLHCTAPEVPGYLPSEKFKVLLREGGLTGATCQRCHLLTHHHRAMSLQ------ 218
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVV-TKVD 219
VSA++ R + +++ KAL++ +VD++D S + + +L G N I+V+ K+D
Sbjct: 219 -----VSAEQYRAVVQNIQPLKALVLLIVDLLDIPDSIVPDLPELVGTNKHIIVLGNKID 273
Query: 220 LLPKGTD--FNCVGDWVVEATTKKKL--NVLSVHLTSSKSLAGIVGVASEIQKEKKGR-D 274
LLP + + + + + +HL S+K+ G+ + S +Q+ K + D
Sbjct: 274 LLPMDSPNYLQRIRRHLTQCCHDAGFGTQLADIHLISAKTGYGVEALVSSLQRSWKYKGD 333
Query: 275 VYILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQI 326
VY++G AN GKS N LL+ + A+ + K S PGTTL ++
Sbjct: 334 VYLVGLANAGKSTLFNTLLESDYCKSRASDVVHKA--TISPWPGTTLNXLKF 383
Score = 38.9 bits (89), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 44/98 (44%), Gaps = 3/98 (3%)
Query: 391 TIFWGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTL--TPPIGKQ 448
++ GGL RID L+ + + V++ DKAD YQK G L P G +
Sbjct: 520 SLLVGGLARIDFLQGGKSCWFSVMASSQVPVHITSLDKADGVYQKHAGEVLLGVPMGGPE 579
Query: 449 KAEGWKGLDRERLLEIKFEDTERPASDVAISGLGWISV 486
+ + + L ++ A+D+ +S GW++V
Sbjct: 580 RMRQFPAFVPQD-LRLEGRGYLEAAADITLSSAGWVAV 616
>gi|82705979|ref|XP_727192.1| GTPase [Plasmodium yoelii yoelii 17XNL]
gi|23482916|gb|EAA18757.1| GTPase of unknown function, putative [Plasmodium yoelii yoelii]
Length = 831
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 73/339 (21%), Positives = 152/339 (44%), Gaps = 39/339 (11%)
Query: 164 QFVSAD--ELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANP---IILVVTKV 218
+++ AD + L ++K+L++ ++DI + + L + + N II +V K+
Sbjct: 397 KYIEADRNNIMNNLIKKMKKKSLVLYIIDITNIENTILPELY-IGCKNKDINIIWLVNKI 455
Query: 219 DLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEK-------- 270
D LPK T+ + + W + K + H+ ++ + I +E+
Sbjct: 456 DCLPKSTNLDIIKIWFRNMIRQIK----NTHINDLIFISALKCYNYNILEERMKNYIDID 511
Query: 271 KGRDVYILGSANVGKSAFINALLKKMGERDPAAAMAQKYR--PIQSAVPGTTLGPIQIDA 328
KG D+YI+G NVGKS+F+N+ LK + + ++ + S +P TTL +
Sbjct: 512 KGIDIYIVGCVNVGKSSFLNSFLKFINYKHIGDIYNKRKKGGVTVSNIPYTTLN-YNVFK 570
Query: 329 FLGGGKLYDTPGVHLHHRQAAVVHAE-DLPALAPQSRLRGQSFAVISETETNNEFKSHGL 387
+ DT G+ ++ +++++ + DL ++ +++ ++ + +
Sbjct: 571 LKKDINIIDTIGIPTKYQYSSILYKDIDLNSIIINKKIQPFTYKLKDD------------ 618
Query: 388 NGFTIFWGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGK 447
++I G L I+L+ LTFY + ++M ++K + F +K+ L PP
Sbjct: 619 --YSIILGSLCYINLI-YGNFALLTFYISNKVTIHMCRSEKVENFLEKKKCSFLYPPHVY 675
Query: 448 QKAEGWKGLDRERLLEIKFEDTERPASDVAISGLGWISV 486
+ K + +++ +D E D+ IS L W S+
Sbjct: 676 SDFDLLKPFVK-HTVKVLGKDYE-SIDDIVISDLCWFSI 712
>gi|376338540|gb|AFB33800.1| hypothetical protein CL1052Contig1_03, partial [Abies alba]
gi|376338542|gb|AFB33801.1| hypothetical protein CL1052Contig1_03, partial [Abies alba]
gi|376338544|gb|AFB33802.1| hypothetical protein CL1052Contig1_03, partial [Abies alba]
Length = 69
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 48/68 (70%), Gaps = 3/68 (4%)
Query: 480 GLGWISVEPVRRSIRNSDINLESTSG---ELHLAVHVPKPVEVFVRNPMPVGKAGAEWYQ 536
GLGWI++EP R+ +L++ S +LHL VHV KPVE+FVR PMP+G+ G+ WY+
Sbjct: 1 GLGWIAIEPGPRANATGAEDLDTLSTIDKQLHLLVHVAKPVEIFVRPPMPIGRLGSTWYE 60
Query: 537 YRELTETE 544
Y ELTE E
Sbjct: 61 YSELTEKE 68
>gi|255581678|ref|XP_002531642.1| conserved hypothetical protein [Ricinus communis]
gi|223528727|gb|EEF30738.1| conserved hypothetical protein [Ricinus communis]
Length = 745
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 116/505 (22%), Positives = 185/505 (36%), Gaps = 138/505 (27%)
Query: 99 ASCYGCGAPLQTSESDAPGY-----------------------------------VDPDT 123
A C GCG +Q S+ PG+ +D D
Sbjct: 243 AVCPGCGIHIQDSDPKQPGFFTKPSIKDPNYKSRSSLVPISLESEFSNSLKTGVVIDDDE 302
Query: 124 YELKKKHHQ-------FKTVLCGRCRLLSH-GHMITAVGGN------GGYAGGKQFVSAD 169
E K ++C RC L H G + N GK+ VSA
Sbjct: 303 AETHDSKQNPVTTTAAEKPIVCARCHSLRHYGKVKDPTVENLLPEFDFDSTVGKRLVSAS 362
Query: 170 ELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDL----------------AGANP-II 212
R + + F+GSF ++ L +G P I+
Sbjct: 363 GARSVVLLVVDAVD----------FDGSFPKKVAKLVSSAIEENFNSWKEGKSGNVPRIV 412
Query: 213 LVVTKVDLLPKGTDFNCVGDWVVEATTKKKLNVL-SVHLTSSKSLAGIVGVASEIQKEKK 271
LVVTK+DLLP WV + + +V+ VH S+ G+ + ++ K
Sbjct: 413 LVVTKIDLLPTTLSPTRFEHWVRQRAREGGASVIKKVHFVSAVRDWGLKDLVDDVIKMAG 472
Query: 272 GR-DVYILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFL 330
R +V+ +G N GKS INA+ K G + ++ VPGTTLG ++++ L
Sbjct: 473 ARGNVWAVGMQNAGKSTLINAMGKWTG-----GGERKLTHLTEAPVPGTTLGIVRVEGVL 527
Query: 331 -GGGKLYDTPGV--------HLHHRQAAVVH-AEDLPALAPQSRLRGQSFAVISETETNN 380
G KL+DTPG+ L + +VH +++L A + ++ +F + + N
Sbjct: 528 PGQAKLFDTPGLLNPHQITTRLTRDEQKLVHISKELKARTYRIKIVCVTFQLQHDVADN- 586
Query: 381 EFKSHGLNGFTIFWGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVT 440
F G + F P L ++M T+ A G
Sbjct: 587 ------------FLG---------------VNFSXP-YLPLHMGKTENASTMLADHFGHQ 618
Query: 441 LTPPIGKQKAEGWKGLDRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINL 500
L PPIG+++ E R R I + + + D++ +GLGW ++
Sbjct: 619 LQPPIGEKRVEELGRWVR-REFSISGSNWDSSSVDISAAGLGWYAI-------------- 663
Query: 501 ESTSGELHLAVHVPKPVEVFVRNPM 525
GE + V + V+V +RNP+
Sbjct: 664 -GLKGEAVVGVWTYEGVDVVLRNPL 687
>gi|170576186|ref|XP_001893531.1| RE23670p [Brugia malayi]
gi|158600406|gb|EDP37634.1| RE23670p, putative [Brugia malayi]
Length = 931
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 109/243 (44%), Gaps = 30/243 (12%)
Query: 94 VNSAVASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAV 153
+ S+ C CGA ++ PG+V + + K + LC RC +L + + V
Sbjct: 381 IPSSNKPCSACGAKFHCRDASLPGFVPAEIF---LKLEDYXDQLCRRCYMLKRHNFLLNV 437
Query: 154 GGNGGYAGGKQFVSADELREKLSHLR-REKALIVKLVDIVDFNGSFLARIRDLAG-ANPI 211
V + + HL+ +++ALI+ +VD+ D GS + + + G P+
Sbjct: 438 N-----------VCEVDYHSMMKHLKLKQEALIILVVDMCDLPGSIYSELPKIIGYQKPM 486
Query: 212 ILVVTKVDLLPKGTD------FNCVGDWVVEAT-TKKKLNVLSVHLTSSKSLAGIVGVAS 264
I+V KVDLLP F V +++ T N+L + L S+K+ G+ + +
Sbjct: 487 IVVGNKVDLLPPDAHRGFLRHFRQVLHGLLKETGFVDNFNILHMSLISAKTGYGVEDLIT 546
Query: 265 EI-----QKEKKGRDVYILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGT 319
I ++ D+Y++G N GKS NALL+ + A + + R + PGT
Sbjct: 547 NIFLRFSTRDTLRNDMYLVGCTNAGKSTLFNALLQSDLCKVRAVDLVE--RAATTPWPGT 604
Query: 320 TLG 322
T+
Sbjct: 605 TIS 607
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 41/212 (19%), Positives = 86/212 (40%), Gaps = 44/212 (20%)
Query: 328 AFLGGGKLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGL 387
F G +DTPG ++ + ++L + P++ + ++F + SE
Sbjct: 700 VFAKGKWCFDTPGTVNSNQILNLFTLDELITILPRTLILPRTFIMHSEE----------- 748
Query: 388 NGFTIFWGGLVRIDLLKV-------------LPETCLTFYGPKSLQVYMVPTDKADEFYQ 434
++ G+ +ID++ + P +T + + L V++ T ++ F +
Sbjct: 749 ---SLLIAGVAQIDVISLPVKSTSEKDYPERRPSILMTVFASEQLPVFIRKTSESSAFRE 805
Query: 435 KELGVTL--TPPIGKQKAEGWKGLDRERLLEIKFEDTERPASDVAISGLGWISVEPVRRS 492
K LG +L P ++ + L ++ ++ + + DV +S LGW+ V
Sbjct: 806 KYLGSSLLVVPAGNAERIARFPDLKSSEMV-LESSGSWKGCGDVVLSSLGWVCV------ 858
Query: 493 IRNSDINLESTSGELHLAVHVPKPVEVFVRNP 524
S GE+ L + P+ +F+R P
Sbjct: 859 --------TSRRGEVRLQAYTPEGRGLFLRTP 882
>gi|167555073|ref|NP_001107900.1| nitric oxide-associated protein 1 [Danio rerio]
gi|161611968|gb|AAI55838.1| Zgc:175125 protein [Danio rerio]
Length = 702
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 128/278 (46%), Gaps = 31/278 (11%)
Query: 62 DRFLELQKA--KEAAKVVVRDS-----KKKRKKKDKVLKVNSAVA-----SCYGCGAPLQ 109
+R LEL K +E + + D K K+K+ KV A A SC GCGA L
Sbjct: 125 ERQLELMKGPVEEHSLIDFHDEGFPLHKPKKKRPQKVFGSPDAQAALSETSCSGCGALLH 184
Query: 110 TSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYAGGKQFVSAD 169
++ PGY+ + Y+ + + +C RC L+ H +V +S D
Sbjct: 185 CTDPQEPGYLPSEKYKPLLEGGGLERAVCQRCFLIQHQQRALSV-----------RMSPD 233
Query: 170 ELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVV-TKVDLLPKGTD-- 226
+ R + +R AL++ ++D++D S + + L G N ++V+ KVDLLP
Sbjct: 234 QYRAVVGSIRPLSALVLLILDLLDLPHSIIPDLPQLLGRNKRVVVLGNKVDLLPGDAQNY 293
Query: 227 FNCVGDWVVEATTKKKLNV--LSVHLTSSKSLAGIVGVASEIQKEKKGR-DVYILGSANV 283
V ++ + ++ VHL S+K+ GI + S +Q + R DVY++G AN
Sbjct: 294 LQRVRRQLMADCARAGISADPRDVHLISAKTGYGIETLISSLQTRGRHRGDVYLIGMANA 353
Query: 284 GKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTL 321
GKS N LL+ + AA +R S PGTTL
Sbjct: 354 GKSTLFNTLLESDYCKSTAADAI--HRATISPWPGTTL 389
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 72/153 (47%), Gaps = 17/153 (11%)
Query: 336 YDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWG 395
YDTPG+ + +V+ +++ + P + ++F + G +F G
Sbjct: 493 YDTPGIIKENDLLSVLTEQEVKLVVPTVAITPRTFLLKP--------------GTVLFLG 538
Query: 396 GLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTL--TPPIGKQKAEGW 453
GL RID L+ T + V++ DKAD+ YQK G TL P G+++ + +
Sbjct: 539 GLARIDYLQGQNSCWFTVLASSRVPVHITSLDKADDIYQKHAGNTLLGVPCGGEERMKTF 598
Query: 454 KGLDRERLLEIKFEDTERPASDVAISGLGWISV 486
L + E++ +D + +D+ IS GWI+V
Sbjct: 599 PPLIAQD-FELQGQDCDTAIADIKISSAGWIAV 630
>gi|325189773|emb|CCA24254.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 556
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 100/205 (48%), Gaps = 17/205 (8%)
Query: 100 SCYGCGAPLQTSESDAPGYV-----DPDTYELKKKHHQFKTVLCGRC-RLLSHGHMITAV 153
SC GCG PLQ G+V T + Q + V C RC ++ HG + V
Sbjct: 36 SCPGCGIPLQYRTPSDLGFVPLRALQNVTESNESIFFQLRKVRCERCYQMEVHGKL--KV 93
Query: 154 GGNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGAN-PII 212
Y + L+++LS L+++LVDI+D GS L+ G + ++
Sbjct: 94 QRQFSYETFGKL-----LKDELS--SNSNVLLLQLVDILDIPGSLLSTAHRAFGTDRQVM 146
Query: 213 LVVTKVDLLP-KGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKK 271
L+V K DL+P K + +A + N+ +++L S+ G+ + +I+K +K
Sbjct: 147 LIVNKGDLIPLKSGTRRLMRHIQQQAKSAGIQNIQAIYLVSALKGIGMHEILRDIKKFRK 206
Query: 272 GRDVYILGSANVGKSAFINALLKKM 296
RD+ ++G+ANVGKS F+N+ L +
Sbjct: 207 NRDLCVIGAANVGKSTFLNSFLSYL 231
>gi|260828333|ref|XP_002609118.1| hypothetical protein BRAFLDRAFT_115313 [Branchiostoma floridae]
gi|229294472|gb|EEN65128.1| hypothetical protein BRAFLDRAFT_115313 [Branchiostoma floridae]
Length = 395
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 73/220 (33%), Positives = 105/220 (47%), Gaps = 23/220 (10%)
Query: 116 PGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYAGGKQFVSADELREKL 175
PG++ P + + V C RC LL++ + V VS D E L
Sbjct: 3 PGFL-PSAKFKNLSEDELREVKCQRCVLLANHKIALDVQ-----------VSRDHYVEVL 50
Query: 176 SHLRREK-ALIVKLVDIVDFNGSFLARIRDLAGANPIILVV-TKVDLLP-KGTDF-NCVG 231
S L+ +K ALI+ +VD++DF S + DL G ++VV K DLLP GT +
Sbjct: 51 SPLKEKKNALIILMVDLLDFPCSIFPNLLDLVGKEKWLVVVGNKFDLLPPDGTTYKRRTE 110
Query: 232 DWVVEATTKKKL----NVLSVHLTSSKSLAGIVGVASEIQKEKKGR-DVYILGSANVGKS 286
D + A + L N+ V L S+K+ G+ + +EIQ R DVY+LG+ NVGKS
Sbjct: 111 DELFMACLRAGLHDNKNIKHVCLISAKTGFGVEKLITEIQTMWGYRGDVYLLGNTNVGKS 170
Query: 287 AFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQI 326
N LL+ + A + Q R S PGTTL ++
Sbjct: 171 TLFNRLLESDFCQQKAEEVFQ--RATISQWPGTTLNLLRF 208
>gi|361068681|gb|AEW08652.1| Pinus taeda anonymous locus CL1052Contig1_03 genomic sequence
Length = 69
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 38/69 (55%), Positives = 47/69 (68%), Gaps = 5/69 (7%)
Query: 480 GLGWISVEPVRRS----IRNSDINLESTSGELHLAVHVPKPVEVFVRNPMPVGKAGAEWY 535
GLGWI++EP + N DI L + +LHL VHV KPVEVFVR PMP+G+ G+ WY
Sbjct: 1 GLGWIAIEPGPSTDGTGAENLDI-LSTIDKQLHLLVHVAKPVEVFVRPPMPIGRLGSTWY 59
Query: 536 QYRELTETE 544
+Y ELTE E
Sbjct: 60 EYSELTEKE 68
>gi|449674982|ref|XP_002162076.2| PREDICTED: nitric oxide-associated protein 1-like [Hydra
magnipapillata]
Length = 666
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 107/484 (22%), Positives = 184/484 (38%), Gaps = 123/484 (25%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C CG+ LQTSE G++ + + K +Q + C C L H N +
Sbjct: 85 CSSCGSILQTSEPLKNGFLVKEKFLESIKQNQLHRLQCVSCFKLRHY--------NNRLS 136
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANP-IILVVTKVD 219
+ +E+ ++L H+R +LI+ +VD+ D G+ + ++ G II+V K+D
Sbjct: 137 SP---LPNNEIIDQLMHIRSTSSLILYVVDMFDIEGTLMDKVLSYIGKRKRIIIVGNKID 193
Query: 220 LLPK------GTDFNCVGDWVVEATTKKKL---NVLSVHLTSSKSLAGIVGVASEIQKEK 270
PK + D + ++ L N + L S+K+ G+ + +I K +
Sbjct: 194 RFPKEHGVKGEVQLERMKDLLKHICFQRGLEGCNFRDICLISAKTGFGLETLVKKISKHR 253
Query: 271 K-GRDVYILGSANVGKSAFINALLK----KMGERDPAAAMAQKYRPI------QSAVPGT 319
+ D+Y++G NVGKS+ N L M +R P A+ Y P+ +S +
Sbjct: 254 EVDMDIYLVGCTNVGKSSLYNLLQNMLNVHMSKRLPPQAIVH-YTPVTTVSLLRSDISMR 312
Query: 320 TL---------GPIQID----------AFLGGGK-------------------------- 334
L GP +++ FLG K
Sbjct: 313 RLWRLQDRLKKGPWEVEKEYSFDGNFLEFLGVNKPELKPELKLIESSNALKEKKVELVDE 372
Query: 335 -----------LYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFK 383
+YDTPGV+ + + E++ L P+ + ++F +
Sbjct: 373 EELCKEKKQCFIYDTPGVYNSSQLLQFLTVEEMHKLYPELWIVPRTFLLQP--------- 423
Query: 384 SHGLNGFTIFWGGLVRID---------------LLKVLPETCLTFYGPKSLQVYMVPTDK 428
G +F GGL R+D L K +T S+ + +
Sbjct: 424 -----GSCLFIGGLARLDYNSISKIESDSANIQLAKSAESIFVTVMMSPSVPCHPTVIES 478
Query: 429 ADEFYQKE-LGVTLTPPIGKQKAEGWKGLDR--ERLLEIKFEDTERPASDVAISGLGWIS 485
AD Y+K + L PIG + +K R + ++ ++ A D+ + GLGW+S
Sbjct: 479 ADVKYEKLFVNNVLEVPIGNELR--YKEFPRLLPKTYQVIGKNLNINACDLVLHGLGWLS 536
Query: 486 VEPV 489
V V
Sbjct: 537 VASV 540
>gi|376338546|gb|AFB33803.1| hypothetical protein CL1052Contig1_03, partial [Pinus mugo]
gi|376338548|gb|AFB33804.1| hypothetical protein CL1052Contig1_03, partial [Pinus mugo]
Length = 69
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/68 (55%), Positives = 47/68 (69%), Gaps = 3/68 (4%)
Query: 480 GLGWISVEP--VRRSIRNSDINLEST-SGELHLAVHVPKPVEVFVRNPMPVGKAGAEWYQ 536
GLGWI++EP D+++ ST +LHL VHV KPVEVFVR PMPVG+ G+ WY+
Sbjct: 1 GLGWIAIEPGPSTDGTGAEDLDILSTIDKQLHLLVHVAKPVEVFVRPPMPVGRLGSTWYE 60
Query: 537 YRELTETE 544
Y ELTE E
Sbjct: 61 YSELTEKE 68
>gi|282851349|ref|ZP_06260714.1| conserved domain protein [Lactobacillus gasseri 224-1]
gi|282557317|gb|EFB62914.1| conserved domain protein [Lactobacillus gasseri 224-1]
Length = 152
Score = 74.7 bits (182), Expect = 1e-10, Method: Composition-based stats.
Identities = 47/153 (30%), Positives = 72/153 (47%), Gaps = 12/153 (7%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG+ LQ + GY+ P + K V C RC L H + I V N
Sbjct: 7 CIGCGSILQDQDPKKSGYL-PTSALKKALTSDDNEVYCQRCFRLRHYNEIMPVEENN--- 62
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
D+ L+ + ++KAL+V +VD+ DF+ S ++ I+ G N ILV KVDL
Sbjct: 63 --------DDFLALLNSISQKKALVVNVVDLFDFSNSLISSIKRFIGGNEYILVGNKVDL 114
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSS 253
PK + + + DW+ + + L + L S+
Sbjct: 115 FPKNSKESKIKDWMRQEANRNGLKPEKIFLVSA 147
>gi|383136301|gb|AFG49210.1| Pinus taeda anonymous locus CL1052Contig1_03 genomic sequence
Length = 69
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/68 (55%), Positives = 48/68 (70%), Gaps = 3/68 (4%)
Query: 480 GLGWISVEPVRRSIRN--SDINLEST-SGELHLAVHVPKPVEVFVRNPMPVGKAGAEWYQ 536
GLGWI++EP + N D+++ ST LHL VHV KPVEVFVR PMPVG+ G+ WY+
Sbjct: 1 GLGWIAIEPGPSTDGNGAEDLDILSTIDKRLHLLVHVAKPVEVFVRPPMPVGRLGSTWYE 60
Query: 537 YRELTETE 544
Y +LTE E
Sbjct: 61 YSDLTEKE 68
>gi|345565063|gb|EGX48019.1| hypothetical protein AOL_s00081g346 [Arthrobotrys oligospora ATCC
24927]
Length = 866
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 108/270 (40%), Gaps = 62/270 (22%)
Query: 120 DPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYAGGKQFVSADELREKLSHLR 179
DP+ EL+ + T+LC RCR L H T G + + + ++ +
Sbjct: 338 DPERKELEIRRRARHTILCNRCRSLLHYQNTTVQGPDATFTQAAEVIAKSPFK------- 390
Query: 180 REKALIVKLVDIVDFNGSFLARIRD--LAGAN----------PIILVVTKVDLL----PK 223
+ + ++D DF S L R LAG N + V+T+ DLL K
Sbjct: 391 --RIHVYHVIDAADFPMSVLPNARKAILAGLNNLKDGKKKDVSLSFVITRADLLMPTEQK 448
Query: 224 GTDF-----NCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYIL 278
T + +++ +A +K L L + S+K+ + EI+ K G V L
Sbjct: 449 VTSLMTYIRRVLNNYLDDADKEKTLKDL--RIVSAKNGWTTERLKDEIRGRKGG--VVFL 504
Query: 279 GSANVGKSAFINALLKKMGERDPAAAMA---------------------QKYR------- 310
G NVGKS A+ K G++D A Q R
Sbjct: 505 GKTNVGKSRLYEAVFPKRGKKDLAVKKGFGRGDLEEQADFLEDDFDFYIQNGRRVKHPEM 564
Query: 311 PIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
P+ S VPGTT+GPI ID G G+L D PG
Sbjct: 565 PLASKVPGTTVGPIAIDFAAGRGQLIDLPG 594
>gi|1261908|emb|CAA65719.1| br-1 protein [Helix pomatia]
Length = 433
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 109/227 (48%), Gaps = 19/227 (8%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA L ++ PGY+ + ++L + + K LC RC + H V
Sbjct: 181 CVGCGALLHCQHNNFPGYLPSEIFKLLSEK-ELKVSLCQRCYYIRHCDAFVEVTAK---- 235
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAG-ANPIILVVTKVD 219
+E + +S +R K+++V +VD++D GS + + G +P+++V K D
Sbjct: 236 -------PEEFADMISKIRPTKSVVVMVVDVMDIQGSIVPDLMTYIGDEHPLVVVGNKAD 288
Query: 220 LL-PKGTDF--NCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEI-QKEKKGRDV 275
LL P ++ N + LN+ L S+K+ GI + +++ KK DV
Sbjct: 289 LLAPDCPEYLENVKIELKQACCNAGLLNIRKCFLISAKTGFGIERLINQLFSFYKKQLDV 348
Query: 276 YILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLG 322
+I+G+AN GKS+ N LL ++ A + Q R SA PGTTL
Sbjct: 349 FIVGTANAGKSSLFNTLLASDYCKNSARDLIQ--RATISAWPGTTLN 393
>gi|156100137|ref|XP_001615796.1| hypothetical protein [Plasmodium vivax Sal-1]
gi|148804670|gb|EDL46069.1| hypothetical protein, conserved [Plasmodium vivax]
Length = 795
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 78/346 (22%), Positives = 152/346 (43%), Gaps = 53/346 (15%)
Query: 164 QFVSAD--ELREKLSHLRREKALIVKLVDIVDFNGSFLARI------RDLAGANPIILVV 215
++V D E+ L + K+L++ L+DI + + L + +D+ II +V
Sbjct: 370 KYVEGDRNEVMNNLIKKMKRKSLVLYLIDITNIENTILPELYIGCKNKDIN----IIWLV 425
Query: 216 TKVDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEK----- 270
KVD LPK + V W + K + H+ ++ + + +E+
Sbjct: 426 NKVDCLPKMANLERVKIWFRNLVRQIK----NAHINDLIFISALKFFNFNVLEERMKFHV 481
Query: 271 ---KGRDVYILGSANVGKSAFINALLKKMGERDPAAAMAQKYR--PIQSAVPGTTL--GP 323
KG D+YI+G NVGKS F+N+ LK + + +++ + S +P TTL
Sbjct: 482 DLEKGTDIYIVGCVNVGKSTFVNSFLKYINYKHLGDIYSRRKKGGVTTSNIPYTTLNYNT 541
Query: 324 IQIDAFLGGGKLYDTPGVHLHHRQAAVVHAE-DLPALAPQSRLRGQSFAVISETETNNEF 382
Q+ + K+ DT G+ ++ +++++ + DL +++ R++ ++ +
Sbjct: 542 FQLKKNI---KIIDTMGIPTKYQYSSILYKDIDLNSISFHKRIQPLTYKLKENA------ 592
Query: 383 KSHGLNGFTIFWGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLT 442
++ G L I+L+ T LT Y + ++M ++K + F +++ L
Sbjct: 593 --------SLILGSLCYINLV-YGSFTLLTLYISNRVTIHMCRSEKVESFLERKKCSFLY 643
Query: 443 PPIGKQKAEGWKGLDRE--RLLEIKFEDTERPASDVAISGLGWISV 486
PP K E K + +++ FE + D+ I L W SV
Sbjct: 644 PPHVKADFELLKPFVKHTVKVVGKDFESID----DIVIGDLCWFSV 685
>gi|260654966|ref|ZP_05860454.1| conserved hypothetical protein [Jonquetella anthropi E3_33 E1]
gi|260630281|gb|EEX48475.1| conserved hypothetical protein [Jonquetella anthropi E3_33 E1]
Length = 374
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 107/431 (24%), Positives = 162/431 (37%), Gaps = 79/431 (18%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA Q+ SD PG++ P + K +C RC L H Y
Sbjct: 10 CPGCGALFQSDRSDLPGFI-PSGLAVTDK------TVCRRCFRLRH------------YG 50
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGAN-PIILVVTKVD 219
G + D L E A V LV L L G + P+ L+VTK D
Sbjct: 51 EGNKAPVNDLLLEPQIRAAAASAAAVFLVCDALSADRALDGFEWLDGVSCPVTLLVTKAD 110
Query: 220 LLPKGTDFNCVGDWVVEATTK--KKLNVLSVHLTSSKSLAGIVGVASEIQKE-KKGRDVY 276
L+ D + +G WV EAT +++ VLS S + +Q G +
Sbjct: 111 LVEPYLDRSALGLWVSEATGVPFEQIQVLSGLKNSD-----LRNFRLRLQDVFSSGDRLL 165
Query: 277 ILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLY 336
LG N GKS ++++L+ P SA+PGTT+G + GG L
Sbjct: 166 FLGKTNAGKSTILSSMLRG------------GSGPTVSAMPGTTVGLCEYQ-LEGGIVLL 212
Query: 337 DTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGG 396
D PG+ H + + L AL P+ RL Q + G + +GG
Sbjct: 213 DAPGLKSHDSLLPALCPQCLMALTPKRRLVCQELTLK--------------EGSALCFGG 258
Query: 397 LVRIDLLKVLPETCL--TFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWK 454
L R ++ L P+ + ++ +KA+E L+PP +
Sbjct: 259 LGRAAVVDGGERGWLRAVAVAPEGVTIHQTSAEKAEELVAAARTDLLSPPC----RTCYD 314
Query: 455 GLDRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVP 514
L R + +F P D+ + G+GW++V TSG + + P
Sbjct: 315 TLSRLPVRRDEF--ALYPGLDLVVGGVGWLAV----------------TSGHGRIRLSGP 356
Query: 515 KPVEVFVRNPM 525
P+ F+R +
Sbjct: 357 DPLHGFLRKQL 367
>gi|294955564|ref|XP_002788568.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239904109|gb|EER20364.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 574
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 92/386 (23%), Positives = 162/386 (41%), Gaps = 56/386 (14%)
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGAN--PIILVVTKV 218
GG Q+ +E+ K+ R+ +L++ LVDI+DF S + + + ++ V+ K+
Sbjct: 140 GGYQWQEEEEIVAKVVKSIRKDSLVLMLVDILDFESSIVPELFESCRQKNLQVMFVINKI 199
Query: 219 DLLP-KGTDFNCVGDWVVEATTK-KKLNVLSVHLTSSKSLAGIVGVASEIQK---EKKGR 273
D +P + + W + + K + V L SS + G + +++ K R
Sbjct: 200 DGIPFYEKKKHQIRQWATRMSRQIKNAHWSDVVLVSSLNGTGFAELEDRMRQYLSADKPR 259
Query: 274 DVYILGSANVGKSAFINALLKKMGERDPAAAMAQKYRP--IQSAVPGTTLGPIQIDAFLG 331
+YI+G N GKS F+N L+ +G ++ +S VPGTT+ F+
Sbjct: 260 WIYIVGRVNTGKSTFVNRWLRHIGYTHLGTVNYKRGTGGITRSPVPGTTM------QFVT 313
Query: 332 GG-----KLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHG 386
G +L D+PG+ + ++ + ED L S R ++ T
Sbjct: 314 FGLPRKFRLVDSPGIPSKVQLSSFL--EDPKDLYDLSLCRQHPVRPVTHTIKPGR----- 366
Query: 387 LNGFTIFWGGLVRIDL-------LKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGV 439
I GGL RID + P L+ + + ++++ T KA++F ++ G
Sbjct: 367 ---SLIIGGGLARIDHKGASTQGMHAQP-VFLSCFVSNKVTLHVIDTKKAEDFLTRKKGT 422
Query: 440 TLTPPIGKQKAEGWKGLDRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDIN 499
+ PP A+ + +E+ + D++I+GLGWI+V
Sbjct: 423 FMYPP---HSADAKLPPLTKHNVEVYAPNPHTAMDDISIAGLGWITV------------- 466
Query: 500 LESTSGELHLAVHVPKPVEVFVRNPM 525
G L V VP+ V+VF R M
Sbjct: 467 --YGYGHEELTVWVPEGVKVFRRPAM 490
>gi|424844826|ref|ZP_18269437.1| putative GTPase [Jonquetella anthropi DSM 22815]
gi|363986264|gb|EHM13094.1| putative GTPase [Jonquetella anthropi DSM 22815]
Length = 370
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 107/431 (24%), Positives = 162/431 (37%), Gaps = 79/431 (18%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA Q+ SD PG++ P + K +C RC L H Y
Sbjct: 6 CPGCGALFQSDRSDLPGFI-PSGLAVTDK------TVCRRCFRLRH------------YG 46
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGAN-PIILVVTKVD 219
G + D L E A V LV L L G + P+ L+VTK D
Sbjct: 47 EGNKAPVNDLLLEPQIRAAAASAAAVFLVCDALSADRALDGFEWLDGVSCPVTLLVTKAD 106
Query: 220 LLPKGTDFNCVGDWVVEATTK--KKLNVLSVHLTSSKSLAGIVGVASEIQKE-KKGRDVY 276
L+ D + +G WV EAT +++ VLS S + +Q G +
Sbjct: 107 LVEPYLDRSALGLWVSEATGVPFEQIQVLSGLKNSD-----LRNFRLRLQDVFSSGDRLL 161
Query: 277 ILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLY 336
LG N GKS ++++L+ P SA+PGTT+G + GG L
Sbjct: 162 FLGKTNAGKSTILSSMLRG------------GSGPTVSAMPGTTVGLCEYQ-LEGGIVLL 208
Query: 337 DTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGG 396
D PG+ H + + L AL P+ RL Q + G + +GG
Sbjct: 209 DAPGLKSHDSLLPALCPQCLMALTPKRRLVCQELTLK--------------EGSALCFGG 254
Query: 397 LVRIDLLKVLPETCL--TFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAEGWK 454
L R ++ L P+ + ++ +KA+E L+PP +
Sbjct: 255 LGRAAVVDGGERGWLRAVAVAPEGVTIHQTSAEKAEELIAAARTDLLSPPC----RTCYD 310
Query: 455 GLDRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVP 514
L R + +F P D+ + G+GW++V TSG + + P
Sbjct: 311 TLSRLPVRRDEF--ALYPGLDLVVGGVGWLAV----------------TSGHGRIRLSGP 352
Query: 515 KPVEVFVRNPM 525
P+ F+R +
Sbjct: 353 DPLHGFLRKQL 363
>gi|294955562|ref|XP_002788567.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239904108|gb|EER20363.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 574
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 92/386 (23%), Positives = 161/386 (41%), Gaps = 56/386 (14%)
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGAN--PIILVVTKV 218
GG Q+ +E+ K+ R+ +L++ LVDI+DF S + + + ++ V+ K+
Sbjct: 140 GGYQWQEEEEIVAKVVKSIRKDSLVLMLVDILDFESSIVPELFESCRQKNLQVMFVINKI 199
Query: 219 DLLP-KGTDFNCVGDWVVEATTK-KKLNVLSVHLTSSKSLAGIVGVASEIQK---EKKGR 273
D +P + + W + + K + V L SS + G + +++ K R
Sbjct: 200 DGIPFYEKKKHQIRQWATRMSRQIKNAHWSDVVLVSSLNGTGFAELEDRMRQYLSADKPR 259
Query: 274 DVYILGSANVGKSAFINALLKKMGERDPAAAMAQKYRP--IQSAVPGTTLGPIQIDAFLG 331
+YI+G N GKS F+N L+ +G ++ +S VPGTT+ F+
Sbjct: 260 WIYIVGRVNTGKSTFVNRWLRHIGYTHLGTVNYKRGTGGITRSPVPGTTM------QFVT 313
Query: 332 GG-----KLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHG 386
G +L D+PG+ + ++ + ED L S R ++ T
Sbjct: 314 FGLPRKFRLVDSPGIPSKVQLSSFL--EDPKDLYDLSLCRQHPVRPVTHTIKPGR----- 366
Query: 387 LNGFTIFWGGLVRIDL-------LKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGV 439
I GGL RID + P L+ + + ++++ T KA++F + G
Sbjct: 367 ---SLIIGGGLARIDHKGASTQGMHAQP-VFLSCFVSNKVTLHVIDTKKAEDFLTRRKGT 422
Query: 440 TLTPPIGKQKAEGWKGLDRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDIN 499
+ PP A+ + +E+ + D++I+GLGWI+V
Sbjct: 423 FMYPP---HSADARLPPLTKHNVEVYAPNPHTAMDDISIAGLGWITV------------- 466
Query: 500 LESTSGELHLAVHVPKPVEVFVRNPM 525
G L V VP+ V+VF R M
Sbjct: 467 --YGYGHEELTVWVPEGVKVFRRPAM 490
>gi|383136281|gb|AFG49200.1| Pinus taeda anonymous locus CL1052Contig1_03 genomic sequence
gi|383136283|gb|AFG49201.1| Pinus taeda anonymous locus CL1052Contig1_03 genomic sequence
Length = 69
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/68 (54%), Positives = 46/68 (67%), Gaps = 3/68 (4%)
Query: 480 GLGWISVEP--VRRSIRNSDINLEST-SGELHLAVHVPKPVEVFVRNPMPVGKAGAEWYQ 536
GLGWI++EP D+++ ST LHL VHV KPVEVFVR PMPVG+ G+ WY+
Sbjct: 1 GLGWIAIEPGPSTDGTGEEDLDILSTIDKRLHLLVHVAKPVEVFVRPPMPVGRLGSTWYE 60
Query: 537 YRELTETE 544
Y +LTE E
Sbjct: 61 YSDLTEKE 68
>gi|383136273|gb|AFG49196.1| Pinus taeda anonymous locus CL1052Contig1_03 genomic sequence
gi|383136275|gb|AFG49197.1| Pinus taeda anonymous locus CL1052Contig1_03 genomic sequence
gi|383136279|gb|AFG49199.1| Pinus taeda anonymous locus CL1052Contig1_03 genomic sequence
gi|383136285|gb|AFG49202.1| Pinus taeda anonymous locus CL1052Contig1_03 genomic sequence
gi|383136287|gb|AFG49203.1| Pinus taeda anonymous locus CL1052Contig1_03 genomic sequence
gi|383136289|gb|AFG49204.1| Pinus taeda anonymous locus CL1052Contig1_03 genomic sequence
gi|383136293|gb|AFG49206.1| Pinus taeda anonymous locus CL1052Contig1_03 genomic sequence
gi|383136299|gb|AFG49209.1| Pinus taeda anonymous locus CL1052Contig1_03 genomic sequence
Length = 69
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/68 (54%), Positives = 46/68 (67%), Gaps = 3/68 (4%)
Query: 480 GLGWISVEP--VRRSIRNSDINLEST-SGELHLAVHVPKPVEVFVRNPMPVGKAGAEWYQ 536
GLGWI++EP D+++ ST LHL VHV KPVEVFVR PMPVG+ G+ WY+
Sbjct: 1 GLGWIAIEPGPSTDGTGAEDLDILSTIDKRLHLLVHVAKPVEVFVRPPMPVGRLGSTWYE 60
Query: 537 YRELTETE 544
Y +LTE E
Sbjct: 61 YSDLTEKE 68
>gi|282851350|ref|ZP_06260715.1| conserved hypothetical protein [Lactobacillus gasseri 224-1]
gi|282557318|gb|EFB62915.1| conserved hypothetical protein [Lactobacillus gasseri 224-1]
Length = 213
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 97/220 (44%), Gaps = 34/220 (15%)
Query: 266 IQKEKKGRDVYILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQ 325
+ K+ + +D+Y +G+ NVGKS INA++ + S PGTTL I+
Sbjct: 4 LAKKGEKKDIYFVGTTNVGKSTLINAIINMNSDLKDVIT--------TSKFPGTTLDEIK 55
Query: 326 IDAFLGGGKLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSH 385
I G L DTPG+ ++ A+ + ++L + P+ L+ ++ +
Sbjct: 56 I-PLSNGHYLIDTPGILNANQLASHLSGKELEVVEPKKPLKPATYQL------------- 101
Query: 386 GLNGFTIFWGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPI 445
L G TIF GL R D + P + T Y + L V+ T+ AD FY+K L PP
Sbjct: 102 -LPGQTIFLAGLGRFDYVDG-PSSGFTIYVARDLYVHRTKTENADTFYEKHKDDLLLPPS 159
Query: 446 GKQKAEGWKGLDRERLLEIKFEDTERPASDVAISGLGWIS 485
KG F E+ SD+ G+G+I+
Sbjct: 160 KDDCLGPLKGQ--------TFSPKEK--SDILFGGVGFIT 189
>gi|297609351|ref|NP_001063000.2| Os09g0364500 [Oryza sativa Japonica Group]
gi|255678838|dbj|BAF24914.2| Os09g0364500 [Oryza sativa Japonica Group]
Length = 434
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 73/245 (29%), Positives = 110/245 (44%), Gaps = 36/245 (14%)
Query: 127 KKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYAGGKQFVSADELREKLSHLRREKALIV 186
K+ + K V+C RC L H ++ FV+A + +L+ ++L++
Sbjct: 160 KEGKKENKVVVCARCHSLRHYGVVKRPEAEP-LLPDFDFVAA--VGPRLASPSGARSLVL 216
Query: 187 KLVDIVDFNGSFL------------ARIRDLAGANPI-----ILVVTKVDLLPKGT---- 225
L D DF+GSF A D P +LVVTK+DLLP +
Sbjct: 217 LLADASDFDGSFPRAVARLVAAAGEAHGSDWKHGAPANLPRALLVVTKLDLLPTPSLSPD 276
Query: 226 DFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGR-DVYILGSANVG 284
D + A L + VHL S+ G+ + +++ R +V+ +G+ NVG
Sbjct: 277 DVHAWAHSRARAGAGGDLRLAGVHLVSAARGWGVRDLLDHVRQLAGSRGNVWAVGARNVG 336
Query: 285 KSAFINALLKKMG-ERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGG-GKLYDTPGVH 342
KS +NA+ + G E P ++ VPGTTL IQ+D LG KL+DTPG+
Sbjct: 337 KSTLLNAIARCSGIEGGPTL--------TEAPVPGTTLDVIQVDGVLGSQAKLFDTPGL- 387
Query: 343 LHHRQ 347
LH Q
Sbjct: 388 LHGHQ 392
>gi|383136297|gb|AFG49208.1| Pinus taeda anonymous locus CL1052Contig1_03 genomic sequence
gi|383136305|gb|AFG49212.1| Pinus taeda anonymous locus CL1052Contig1_03 genomic sequence
Length = 69
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 37/69 (53%), Positives = 46/69 (66%), Gaps = 5/69 (7%)
Query: 480 GLGWISVEPVRRS----IRNSDINLESTSGELHLAVHVPKPVEVFVRNPMPVGKAGAEWY 535
GLGWI++EP + + DI L + LHL VHV KPVEVFVR PMPVG +G+ WY
Sbjct: 1 GLGWIAIEPGPSTDGPGAEDLDI-LSTIDKRLHLLVHVAKPVEVFVRPPMPVGSSGSTWY 59
Query: 536 QYRELTETE 544
+Y +LTE E
Sbjct: 60 EYSDLTEKE 68
>gi|47200956|emb|CAF87804.1| unnamed protein product [Tetraodon nigroviridis]
Length = 379
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 110/229 (48%), Gaps = 26/229 (11%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA L + PGY+ + +++ + + C RC LLSH H
Sbjct: 55 CPGCGAVLHCTALAVPGYLPSEKFKVLLQEGRLGGATCQRCHLLSHHHKAL--------- 105
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVV-TKVD 219
K V+A++ R + +R +AL++ +VD++D S + + +L G N ++V+ KVD
Sbjct: 106 --KLQVTAEQYRAVVQSIRPLRALVLLIVDLLDVPDSIVPDLAELVGTNKHVVVLGNKVD 163
Query: 220 LLPKGTDFNC------VGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGR 273
LLP + + + + EA + V VHL S+K+ G+ + S K
Sbjct: 164 LLPADSPNHLQRIRRRLSGYCREAGFGDQ--VADVHLISAKTGYGVEALRS----WKYNG 217
Query: 274 DVYILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLG 322
DVY++G AN GKS N LL+ + A+ + +K S PGTTL
Sbjct: 218 DVYLVGVANAGKSTLFNTLLESDYCKSRASEVTRKA--TISPWPGTTLN 264
>gi|309805279|ref|ZP_07699331.1| GTP-binding family protein [Lactobacillus iners LactinV 09V1-c]
gi|308165513|gb|EFO67744.1| GTP-binding family protein [Lactobacillus iners LactinV 09V1-c]
Length = 124
Score = 70.9 bits (172), Expect = 2e-09, Method: Composition-based stats.
Identities = 45/125 (36%), Positives = 60/125 (48%), Gaps = 12/125 (9%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG+ LQ +S GY+ P + K +V C RC L H + IT V N
Sbjct: 8 CIGCGSILQDKDSKLSGYM-PHSAFNKMIQEPDTSVYCQRCFRLRHYNEITPVNENN--- 63
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
D+ L+ L +KALIV +VD+ DFN S + + G N +LV KVDL
Sbjct: 64 --------DDFLRLLNSLGNKKALIVNVVDLFDFNNSLITSLDRFIGNNEFVLVGNKVDL 115
Query: 221 LPKGT 225
PK +
Sbjct: 116 FPKNS 120
>gi|361068683|gb|AEW08653.1| Pinus taeda anonymous locus CL1052Contig1_03 genomic sequence
gi|383136291|gb|AFG49205.1| Pinus taeda anonymous locus CL1052Contig1_03 genomic sequence
Length = 69
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 45/68 (66%), Gaps = 3/68 (4%)
Query: 480 GLGWISVEP--VRRSIRNSDINLEST-SGELHLAVHVPKPVEVFVRNPMPVGKAGAEWYQ 536
GLGWI++EP D+++ ST LHL VHV KPVEVFVR PMPVG+ + WY+
Sbjct: 1 GLGWIAIEPGPSTDGTGAEDLDILSTIDKRLHLLVHVAKPVEVFVRPPMPVGRLASTWYE 60
Query: 537 YRELTETE 544
Y +LTE E
Sbjct: 61 YSDLTEKE 68
>gi|405977813|gb|EKC42247.1| Uncharacterized protein C4orf14-like protein [Crassostrea gigas]
Length = 820
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 111/239 (46%), Gaps = 32/239 (13%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA L + PGY+ + ++ K + K C +C + + + +
Sbjct: 287 CGGCGALLHCQDHTVPGYIPSEVFKEMTKE-ELKDSKCQKCHKMQYHKTLIDIRATDD-- 343
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGA-NPIILVVTKVD 219
A E+ +++ RR +++ +VD++D S R+L + PI ++ KVD
Sbjct: 344 ------RAHEIMKEIQENRR--CMVMLIVDLLDIENSIPDLFRELIPSRKPIFVIGNKVD 395
Query: 220 LLPKG-TDF-NCVGDWVVEATTKKKL---NVLSVHLTSSKSLAGIVGVASEI-QKEKKGR 273
++P+ D+ + V +V+A L NV V L S+K+ G+ + S++ Q
Sbjct: 396 IIPQDHPDYLDSVHQTLVDACINCGLEQHNVKHVTLISAKTGFGVETLISKLLQDWGMSG 455
Query: 274 DVYILGSANVGKSAFINALLK----KMGERD--PAAAMAQKYRPIQSAVPGTTLGPIQI 326
DVY++G+AN GKS N+LL RD P A + S +PGTT+ ++
Sbjct: 456 DVYMIGTANSGKSTLYNSLLNSDYCNYHVRDIVPQATV--------SELPGTTMNTLKF 506
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 86/194 (44%), Gaps = 27/194 (13%)
Query: 335 LYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFW 394
LYDTPG+ + + E+L ++P ++ + + +T+F
Sbjct: 618 LYDTPGLLCDSQIYMDLLPEELKLISPAKKIVPHCILLKQD--------------YTVFV 663
Query: 395 GGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGV-TLTPPIGKQKAEGW 453
GL R+D ++ + L Y L V++VP +A+EFY+ +G L P+G +
Sbjct: 664 TGLGRLDYVEGNQDVMLVIYISSKLPVHIVPRPEAEEFYRCNIGTEVLGLPLGDESRLAK 723
Query: 454 KGLDRERLLEIKFEDT--ERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAV 511
+ R + I+ ED A+D+ +S LGW+SV + R S ++ L V
Sbjct: 724 LPPLKGRNIRIRPEDQTYNTAAADIQLSSLGWVSVVGMSR----------SAELDITLRV 773
Query: 512 HVPKPVEVFVRNPM 525
+ P +++R M
Sbjct: 774 YTPGARGIYIRPAM 787
>gi|444516264|gb|ELV11095.1| hypothetical protein TREES_T100016525 [Tupaia chinensis]
Length = 598
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 105/434 (24%), Positives = 169/434 (38%), Gaps = 81/434 (18%)
Query: 100 SCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGY 159
+C GCGA L +S PGY+ + + + + +C RC LL H +
Sbjct: 137 NCSGCGAELHCQDSGVPGYLPSEKFLRASQDGELARTVCLRCWLLVHHRRALRL------ 190
Query: 160 AGGKQFVSADELREKLSHLRRE-KALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKV 218
Q L+ + LRR +AL++ +VD++D + L + L G +I++ KV
Sbjct: 191 ----QVSREQYLQLVSAALRRPGRALVLYMVDLLDLPDALLPDLPALVGPKQLIVLGNKV 246
Query: 219 DLLPKGTD-----------FNCVGDWVV-----------------------EATTKKKLN 244
DLLP+ +C ++ ++ K +
Sbjct: 247 DLLPQDAPGYRQRLRERLWNDCARAGLLLAPGHQGPQLSSGEGPGDTEGNSNSSVKSRTV 306
Query: 245 VLSVHLTSSKSLAGIVGVASEIQKEKKGR-DVYILGSANVGKSAFINALLKKMGERDPAA 303
V V L S+K+ GI + S +Q+ + R DVY++G+ N GKS N LL E D
Sbjct: 307 VRDVRLISAKTGYGIEELISSLQRSWRYRGDVYLVGATNAGKSTLFNTLL----ESDYCT 362
Query: 304 AMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPGVHLHHRQAAVVHAEDLPALAPQS 363
A + A+ T+ P +G Y ++A V D A ++
Sbjct: 363 AKGAE------AIDRATISPWP--GRVGRTFWY----TEEQKDESAFVFDADSLAFDMEN 410
Query: 364 RLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRIDLLKVLPETC------LTFYGPK 417
V T E H + F+ D + E C T
Sbjct: 411 E---PVTDVPKPTTKRVELTPHDVKDAHWFY------DTPGITKENCGDQSAWFTVVASN 461
Query: 418 SLQVYMVPTDKADEFYQKELGVTL--TPPIGKQKAEGWKGLDRERL-LEIKFEDTERPAS 474
+L V++ D+AD YQK G TL P G+++ G+ L E + L+ D+E +
Sbjct: 462 ALPVHVTSLDRADAVYQKHAGHTLLQVPTGGEERMAGFPPLVAEDIKLKEGLGDSE-AVA 520
Query: 475 DVAISGLGWISVEP 488
D+ S GW++V P
Sbjct: 521 DIKFSSAGWVAVTP 534
>gi|324501284|gb|ADY40574.1| Unknown [Ascaris suum]
Length = 380
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 95/208 (45%), Gaps = 36/208 (17%)
Query: 137 LCGRCRLLSHGHMITAVGGNGGYAGGKQFVSADELREKLSHLR-REKALIVKLVDIVDFN 195
LC RC LL + + V V + R + HL+ +++ALI+ +VD+ D
Sbjct: 78 LCRRCYLLEKHNFLLNVN-----------VCEVDYRSMMCHLKLKQEALIILVVDMSDLP 126
Query: 196 GSFLARIRDLAG-ANPIILVVTKVDLLP-----------KGTDFNCVGDWVVEATTKKKL 243
S A + ++ G P+++V KVDLLP + T F V D ++
Sbjct: 127 ASIYAHLPEIIGDRKPMVVVGNKVDLLPPDQRSGYLKHFRETLFKAVED----VGFTRRF 182
Query: 244 NVLSVHLTSSKSLAGIVGVASEIQKEKKGR------DVYILGSANVGKSAFINALLKKMG 297
NVL V L S+K+ G+ + + I + R D+Y++G N GKS N LL+
Sbjct: 183 NVLHVALISAKTGFGVEELITNIHLKWSTRGTAIRNDIYLVGCTNAGKSTLFNTLLQSDL 242
Query: 298 ERDPAAAMAQKYRPIQSAVPGTTLGPIQ 325
+ A + Q R S PGTT+ ++
Sbjct: 243 CKVRAVDLVQ--RATTSIWPGTTISLLK 268
>gi|296084238|emb|CBI24626.3| unnamed protein product [Vitis vinifera]
Length = 55
Score = 68.6 bits (166), Expect = 8e-09, Method: Composition-based stats.
Identities = 33/63 (52%), Positives = 41/63 (65%), Gaps = 10/63 (15%)
Query: 491 RSIRNSDINLESTSGELHLAVHVPKPVEVFVRNPMPVGKAGAEWYQYRELTETELEVRPK 550
RS+R S NLE + +L L++ V +PVGK G EWYQY+ELTE E+EVRPK
Sbjct: 3 RSLRTSGSNLEEIAKQLKLSIRVL----------IPVGKGGGEWYQYQELTEKEVEVRPK 52
Query: 551 WYF 553
WYF
Sbjct: 53 WYF 55
>gi|420266508|ref|ZP_14768971.1| GTPase YqeH, partial [Lactobacillus mali KCTC 3596 = DSM 20444]
gi|394425277|gb|EJE98273.1| GTPase YqeH, partial [Lactobacillus mali KCTC 3596 = DSM 20444]
Length = 116
Score = 68.2 bits (165), Expect = 1e-08, Method: Composition-based stats.
Identities = 40/121 (33%), Positives = 63/121 (52%), Gaps = 14/121 (11%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG+ +Q+++ D GYV KK + K + C RC L H + ++ V
Sbjct: 10 CIGCGSLIQSNDPDGLGYVPASAL---KKQVETKELYCKRCFRLRHYNEVSDVN------ 60
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ + L+ + ALIV ++DI DF+GS + I+ G NPI++V K DL
Sbjct: 61 -----LTDDDFLKILTQIGDTDALIVNVIDIFDFSGSIIPGIQRYVGKNPILMVGNKEDL 115
Query: 221 L 221
L
Sbjct: 116 L 116
>gi|414885177|tpg|DAA61191.1| TPA: hypothetical protein ZEAMMB73_567116 [Zea mays]
Length = 454
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 113/246 (45%), Gaps = 33/246 (13%)
Query: 134 KTVLCGRCRLLSHGHMITAVGGNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVD 193
K ++C RC L H + FV+A + +L+ ++L++ L D D
Sbjct: 160 KVLVCARCHSLRHYGRVKHPDAER-LLPDFDFVAA--VGPRLASPSGARSLVLLLADASD 216
Query: 194 FNGSF---------------LARIRDLAGAN--PIILVVTKVDLLPKGT----DFNCVGD 232
F+GSF A + A AN +LVVTK+DLLP + D +
Sbjct: 217 FDGSFPRAVARLVAAAGEAHRADWKHGAPANLPRALLVVTKLDLLPTPSLSPDDVHAWAH 276
Query: 233 WVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGR-DVYILGSANVGKSAFINA 291
A L + VHL S+ G+ + +++ R +V+ +G+ NVGKS +NA
Sbjct: 277 SRARAGAGADLRLAGVHLVSATRGWGVRDLLEHVRELAGTRGNVWAVGARNVGKSTLLNA 336
Query: 292 LLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGG-GKLYDTPGVHLHHRQAAV 350
+ + G + + ++ VPGTTL I++D LG KL+DTPG+ H+ +
Sbjct: 337 IARCCG-------IVGRPTLTEAPVPGTTLDVIKLDGVLGAQAKLFDTPGLLHGHQLTSR 389
Query: 351 VHAEDL 356
+ +E++
Sbjct: 390 LTSEEM 395
>gi|403220448|dbj|BAM38581.1| GTPase [Theileria orientalis strain Shintoku]
Length = 585
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 82/341 (24%), Positives = 146/341 (42%), Gaps = 43/341 (12%)
Query: 167 SADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGAN---PIILVVTKVDLLPK 223
S E+ ++ + +LI+ +VD+ + S + + +A N +I + K+D+LPK
Sbjct: 224 STSEIISNMATRIKNDSLILFIVDLTNVEVSVIPELY-IALRNRALDVIWIANKLDVLPK 282
Query: 224 GTDFNCVGDW----VVEATTKKKLNVLSV-----HLTSSKSLAGI-----VGVASEIQKE 269
G + + + W V K NV+ V ++ G+ E K
Sbjct: 283 GCEASEIKSWLRSVVRHIGNSKSFNVIPVSSSKGRCRQQQTFEGVGFDQLEARLKEYLKA 342
Query: 270 KKGRDVYILGSANVGKSAFINALL-----KKMGERDPAAAMAQKYRPIQSAVPGTTLGPI 324
+ R++Y++G+ NVGKS F++ L K +G + ++ R SA+PGTTL I
Sbjct: 343 GEPRNIYVVGATNVGKSTFVDRFLDYIHYKHVGTLNLRRSVGGATR---SAIPGTTLEFI 399
Query: 325 QIDAFLGGGKLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKS 384
+ G KL DTPG+ + LP+L + IS T+T N
Sbjct: 400 EF-GLPKGFKLVDTPGIPI---------ISQLPSLL----YKPVDLLSISMTKTINPACI 445
Query: 385 HGLNGFTIFWGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPP 444
G ++ GG+ RID ++ T ++G + + + + +++ ++G L PP
Sbjct: 446 KLEEGKSLLIGGVARIDHVEGSSCTIQCYFG-NGVTMKVCRSVASEDIMNYQVGYKLYPP 504
Query: 445 IGKQKAEGWKGLDRERLLEIKFEDTERPASDVAISGLGWIS 485
K+ + + R + + T + I GLGW S
Sbjct: 505 HSKEDYKKLTPFSKYR-VTVNCNGTG-ALDEFVICGLGWFS 543
>gi|255030495|ref|ZP_05302446.1| GTP-binding protein YqeH [Listeria monocytogenes LO28]
Length = 178
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 79/173 (45%), Gaps = 24/173 (13%)
Query: 314 SAVPGTTLGPIQIDAFLGGGKLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVI 373
S PGTTL I+I G L DTPG+ HH+ A + L A+ P+ ++ F +
Sbjct: 6 SQFPGTTLDKIEI-PLADGNVLVDTPGIINHHQMAHFIDTTTLKAITPKKEVKPAVFQLN 64
Query: 374 SETETNNEFKSHGLNGFTIFWGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFY 433
E T+F G L R+D + L Y +L ++ +KA+ Y
Sbjct: 65 EEQ--------------TLFLGALARLDYVSG-GRKSLVVYVSNNLPIHRTKLEKAEALY 109
Query: 434 QKELGVTLTPPIGKQKAEGWKGLDRERLLEIKFEDTERPASDVAISGLGWISV 486
+K+ G+ L PP E K L +L+ F E+ +D+ SGLGW+++
Sbjct: 110 EKQAGLVLQPP----TEEDMKTL--PKLVPYSFTVKEK--ADIVFSGLGWVTI 154
>gi|195628568|gb|ACG36114.1| hypothetical protein [Zea mays]
Length = 43
Score = 67.8 bits (164), Expect = 2e-08, Method: Composition-based stats.
Identities = 31/42 (73%), Positives = 36/42 (85%)
Query: 292 LLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGG 333
+L+ M +DP AA AQKY+PIQSAVP TTLGPIQI+AFLGGG
Sbjct: 1 MLRTMAYKDPVAAAAQKYKPIQSAVPRTTLGPIQIEAFLGGG 42
>gi|383136277|gb|AFG49198.1| Pinus taeda anonymous locus CL1052Contig1_03 genomic sequence
gi|383136295|gb|AFG49207.1| Pinus taeda anonymous locus CL1052Contig1_03 genomic sequence
gi|383136303|gb|AFG49211.1| Pinus taeda anonymous locus CL1052Contig1_03 genomic sequence
Length = 69
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 44/68 (64%), Gaps = 3/68 (4%)
Query: 480 GLGWISVEP--VRRSIRNSDINLEST-SGELHLAVHVPKPVEVFVRNPMPVGKAGAEWYQ 536
GLGWI++EP D+++ ST LHL VHV K VEVFVR PMPVG+ + WY+
Sbjct: 1 GLGWIAIEPGPSTDGTGAEDLDILSTIDKRLHLLVHVAKAVEVFVRPPMPVGRLASTWYE 60
Query: 537 YRELTETE 544
Y +LTE E
Sbjct: 61 YSDLTEKE 68
>gi|255027638|ref|ZP_05299624.1| GTP-binding protein YqeH [Listeria monocytogenes FSL J2-003]
Length = 108
Score = 67.4 bits (163), Expect = 2e-08, Method: Composition-based stats.
Identities = 41/120 (34%), Positives = 61/120 (50%), Gaps = 18/120 (15%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA +QT + D GY K + V+C RC L H + I V
Sbjct: 7 CIGCGAVIQTEDPDKIGYA-------PKSSLNNEQVICKRCFRLKHYNEIQDVA------ 53
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ D+ L+ + ++ALIV +VDI DF+GS+L + AG+NP++LV K D+
Sbjct: 54 -----LTDDDFLRILNQISSKQALIVYVVDIFDFDGSWLPGLPRFAGSNPVLLVGNKEDV 108
>gi|195584491|ref|XP_002082038.1| GD11344 [Drosophila simulans]
gi|194194047|gb|EDX07623.1| GD11344 [Drosophila simulans]
Length = 499
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 85/158 (53%), Gaps = 12/158 (7%)
Query: 173 EKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGA-NPIILVVTKVDLLPKGTD--FNC 229
+ +S ++ + AL + LVD++DF S ++++ GA P+ LV KVDLLP+ ++
Sbjct: 44 DTISRIQDKFALAIVLVDLLDFPCSIWPGMQNILGAKRPVFLVGNKVDLLPRDSNIYLQH 103
Query: 230 VGDWVVEATTK----KKLNVLSVHLTSSKSLAGIVGVASEIQK--EKKGRDVYILGSANV 283
+ D + K LN+ +V L S+K+ GI + +++ K KG DVY++G NV
Sbjct: 104 IKDSLQREFIKHGGGDGLNIKNVSLISAKTGYGIEELITQLHKTWAYKG-DVYLVGCTNV 162
Query: 284 GKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTL 321
GKS+ N LL R A+ + +K PGTTL
Sbjct: 163 GKSSLFNILLNSDYCRPEASDLVRK--ATTCPWPGTTL 198
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 98/239 (41%), Gaps = 51/239 (21%)
Query: 302 AAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPGVHLHHRQAAVVHAEDLPALAP 361
A AMA RPI TTL D + +YDTPGV + + ++ AE+L L P
Sbjct: 266 AFAMAGGSRPI------TTLNDRHKD-YKEARWVYDTPGVMQPDQISPLLTAEELVKLQP 318
Query: 362 QSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRIDLLKVL-PETCLTF-----YG 415
+ +R ++F + + +I GGL R+DLL++ P + +
Sbjct: 319 ATMIRPRAFRLRPQ--------------MSILLGGLARLDLLEITSPRKHFDWLKVFVFA 364
Query: 416 PKSLQVYMVPTDKADEFYQKELGVT-LTPPIGKQKAEG----WKGL---DRERLL--EIK 465
+ L + + T+ A+ Y++ +G L P + E W GL D + +L E +
Sbjct: 365 SEHLPIMIADTEAAESVYKRYVGSPFLGVPFSSEDLEARLRRWPGLQCKDGDFVLASEGR 424
Query: 466 FEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVEVFVRNP 524
E T R D+ +S GW+ L + E L P+ ++ R P
Sbjct: 425 NEGT-RLNCDITLSSAGWMGF-------------LLPGNSECRLRAWTPQAAGIYRREP 469
>gi|399219162|emb|CCF76049.1| unnamed protein product [Babesia microti strain RI]
Length = 569
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 96/390 (24%), Positives = 157/390 (40%), Gaps = 77/390 (19%)
Query: 70 AKEAAKVVVRDSKKKR----KKKDKVLKVNSAVASCYGCGAPLQTSESDAPGYVDPDTYE 125
A+ K +D K+K K+ K ++ C GCG Q+ + PGY+D ++
Sbjct: 70 ARNLIKRTYKDEKEKNIGTWKESVKGFNIDVRPFQCPGCGISFQSKDVFLPGYIDTHEFD 129
Query: 126 LKKKHH----QFKTV-LCGRCRLLSHGHMIT------------------AVGGNGGYAGG 162
K + + K + LC RC+ G+++ A+G A
Sbjct: 130 KFKSQNIEDPKLKLLPLCMRCKGFKGGNVLNDGKHLSNEYKETNKRNDLAIGNTAIDASN 189
Query: 163 KQ-FVSADELREKLSHLRREKALIVKLVD------IVDFNGSFLARI----------RDL 205
+ FV + L++ H I+ +D +VDF + I + L
Sbjct: 190 ETAFVLHNTLKKNY-HRHVSIVYIMDALDLYLDKRVVDFVVNRRREISKRVKMSDGDQTL 248
Query: 206 AGANPIILVVTKVDLLPKGTD--FNCVGDWVVEATTKKKLNVLSVHLTSSKSLAG----- 258
+ +VV K+DL+P + C + K+L + H+ + SL G
Sbjct: 249 SKLTLFYIVVNKIDLVPYDSRKRILCYVHKLFN-DVHKELGLKPRHIFLTNSLTGNGVNL 307
Query: 259 ---IVGVASEIQKEKKGRDVYILGSANVGKSAFINALLKKMGE-RDPAAAMAQKYRPIQS 314
+V ++EI + K VY +G AN GKS +N L K + + P + R S
Sbjct: 308 FYSVVLHSAEILRSK----VYFIGYANSGKSTLLNWLAKFASDTKSPVSPN----RLATS 359
Query: 315 AVPGTTLGPIQIDAFLGGGK--LYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAV 372
PGTTL P++ID G K LYDTPG+ L + + + +++P P+ V
Sbjct: 360 IFPGTTLRPVKIDI---GKKYELYDTPGILLTNSITSHLSVDNIPIAIPKKHKAPMIHRV 416
Query: 373 ISETETNNEFKSHGLNGFTIFWGGLVRIDL 402
+ K + G ++ G VRIDL
Sbjct: 417 -------KDGKLYNYLGESLLLGPFVRIDL 439
>gi|71031054|ref|XP_765169.1| hypothetical protein [Theileria parva strain Muguga]
gi|68352125|gb|EAN32886.1| hypothetical protein, conserved [Theileria parva]
Length = 662
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 106/493 (21%), Positives = 188/493 (38%), Gaps = 114/493 (23%)
Query: 30 YTKPTLIVCKSTLSPETQFESDGAGAAAPTRGDRFLELQKAKEAAKVV---VRDSK---- 82
+ KP + K+ S + D + + ++LE Q+ +++ +R+S+
Sbjct: 97 FPKPRPLSSKNPSSTQNSANEDLSESDLLELEKKYLEPQENSTFNRIITENIRESQHNHE 156
Query: 83 KKRKKKDKV---------LKVNSAVASCYGCGAPLQTSESDAPGYVDPDTY--ELKKKHH 131
K + K+DK KV CYGCG LQ + + GYV + EL K
Sbjct: 157 KNKGKRDKYEDWRELVREFKVLGVGKKCYGCGVNLQFTNPNGRGYVQESYFHNELSK--- 213
Query: 132 QFKTVLCGRCRLLSHGHMITAVGGNGGYAG--------------------------GKQF 165
C RC LS ++ T + + G +
Sbjct: 214 ------CQRCSALS-SNISTLLSQSPNTLTLNSVNSVNSVNSVNKGNKGNKGNNVLGIRE 266
Query: 166 VSADEL---REKLSHLRREKALIVKLVDIVD---------------FNGSFLARI----- 202
S + + R L R + I+ ++D++D F+ + LA
Sbjct: 267 ASNETIGVVRNMLRLKSRRRVTILYIIDVIDPHIEYKLLQIIKQRRFSVTGLATTHTDLS 326
Query: 203 RDLAGANPIILVVTKVDLLPKGTDFNCVGDWVVEATTKKKL----NVLSVHLTSSKSLAG 258
R+ G L++ K+DLLPK V + +K +L ++ ++ K++
Sbjct: 327 RESIGGVRFYLILNKIDLLPKHNKEELVQFFKKMINSKVELLKAKHIFTISGKYRKNVGE 386
Query: 259 IVGVASEIQKEKKGRDVYILGSANVGKSAFINAL--------LKKMGERDPAAAMAQKY- 309
++GV + ++ G + +G N GKS IN L L K + + K
Sbjct: 387 LMGVILT-EAKRLGNQILFIGPTNSGKSTLINLLHKQFTHNSLHKQFTHNTTNGVTNKSD 445
Query: 310 -----RPIQSAVPGTTLGPIQIDAFLGGG-KLYDTPGVHLHHRQAAVVHAEDLPALAPQS 363
R S +PGTTLG I I LGGG +YDTPG+ + + + V+ +L L Q+
Sbjct: 446 NCVCKRVTSSIIPGTTLGVINIS--LGGGLSIYDTPGIFVPNSLISHVNDVNLKHLITQN 503
Query: 364 RLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRIDLLKVLPETCLTFYGPKSLQVYM 423
+ + G+++ VR+D++ + Y L++++
Sbjct: 504 IYPNKPITLKK--------------GYSMLIDRYVRLDMISG-RDVFFKCYFSDKLKLHI 548
Query: 424 VPTDKADEFYQKE 436
PT ++F +K
Sbjct: 549 KPTHIINQFLRKH 561
>gi|13358031|ref|NP_078305.1| ATP/GTP-binding protein [Ureaplasma parvum serovar 3 str. ATCC
700970]
gi|167971513|ref|ZP_02553790.1| conserved hypothetical protein [Ureaplasma parvum serovar 6 str.
ATCC 27818]
gi|168281672|ref|ZP_02689339.1| GTP-binding protein [Ureaplasma parvum serovar 14 str. ATCC 33697]
gi|168307814|ref|ZP_02690489.1| GTP-binding domain protein [Ureaplasma parvum serovar 1 str. ATCC
27813]
gi|170762423|ref|YP_001752553.1| hypothetical protein UPA3_0487 [Ureaplasma parvum serovar 3 str.
ATCC 27815]
gi|11356759|pir||A82887 conserved hypothetical ATP/GTP-binding protein UU468 [imported] -
Ureaplasma urealyticum
gi|6899462|gb|AAF30880.1|AE002143_5 conserved hypothetical ATP/GTP-binding protein [Ureaplasma parvum
serovar 3 str. ATCC 700970]
gi|168828000|gb|ACA33262.1| conserved hypothetical protein [Ureaplasma parvum serovar 3 str.
ATCC 27815]
gi|171902631|gb|EDT48920.1| GTP-binding domain protein [Ureaplasma parvum serovar 1 str. ATCC
27813]
gi|182676061|gb|EDT87966.1| GTP-binding protein [Ureaplasma parvum serovar 14 str. ATCC 33697]
gi|186701126|gb|EDU19408.1| conserved hypothetical protein [Ureaplasma parvum serovar 6 str.
ATCC 27818]
Length = 361
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 112/260 (43%), Gaps = 41/260 (15%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA L + + GY P K ++ KT LC RC L H + + V N
Sbjct: 7 CKGCGAFLN-DQINTIGYT-P-------KINETKTNLCQRCFKLIHYNKLEKVSTNLN-- 55
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++E ++ L I ++DI+D + + +++ N II +V K+DL
Sbjct: 56 --------QSIKETINTLNFSNLQIFAVLDILDLEHTIIDELKEYQ--NKIIFLVNKIDL 105
Query: 221 LPKGTDFNCVGDWVVEATTKK-----KLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDV 275
LP+ + V + VV+ K+ +S H S+ SL ++ KK + +
Sbjct: 106 LPQRYNSELVNENVVKTLINHGFIDPKIIYVSTH--SNTSLKKVMDYIKN-ATNKKQKSI 162
Query: 276 YILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKL 335
+ G +NVGKS+ INALL A K + S+ TT+ +I+ + ++
Sbjct: 163 F-FGKSNVGKSSLINALL---------ALNKIKTKLTISSYTNTTINLNKIN--IQEHQI 210
Query: 336 YDTPGVHLHHRQAAVVHAED 355
D PGV V ED
Sbjct: 211 LDAPGVCFDENILNYVRDED 230
>gi|401425501|ref|XP_003877235.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322493480|emb|CBZ28768.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 918
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 102/261 (39%), Gaps = 74/261 (28%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYE----LKKKHHQFKTVLCGRCRLLS-----HG---- 147
C GCGA LQ DA GYV P E + + Q + R L HG
Sbjct: 281 CTGCGALLQNVSDDAFGYVQPGEIEKYVAQRNEKAQLRHEYAARMAELQAHWEKHGRHVG 340
Query: 148 -------------------------HMITAVGGNGGYAGGKQFVSADELREKLSHLRREK 182
H A+ N G G ++ SA + ++L L+ +K
Sbjct: 341 EEWLDFMTQEEFDAFYRDTPRPFTCHRCHALE-NLGVEGRRKVWSAPDFTDQLRALKEKK 399
Query: 183 ALIVKLVDIVDFNGSFLARIRDLAG----ANPIILVVTKVDLLPKGTDFNCVGD------ 232
++V +VDI DF GS + DL G NP+I+ V K+D + + FN G
Sbjct: 400 CVVVLVVDITDFPGSM---VYDLPGLISMNNPVIIAVNKMDCI-RNRSFNYAGKDRSVAA 455
Query: 233 ----------WVVEATTKKKL---NVLSVHLTSSKSLAGIVGVASEIQ--------KEKK 271
WV++ + L + V S+K GI + S I+ + K
Sbjct: 456 CLVPESYVRRWVMDIAVQFGLPQHQIKKVVPLSAKRGWGITHLISAIEDAANLNLRRPHK 515
Query: 272 GRDVYILGSANVGKSAFINAL 292
Y +G ANVGKS+ INA+
Sbjct: 516 PLPTYFVGVANVGKSSVINAM 536
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 89/215 (41%), Gaps = 33/215 (15%)
Query: 284 GKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGK-LYDTPGVH 342
G + +NA+ +G A Q+ +A PG + D G +YDTPG+
Sbjct: 603 GTTVAVNAVRLSLGPTPHAVKQEQQRLSESAAAPG------KPDDVAGTQTYIYDTPGLL 656
Query: 343 LHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRIDL 402
H + +++ + + Q F + L G T+F GGL +D+
Sbjct: 657 PHWHERSLLTLLQMRRTLIRKFRNPQCFLL--------------LPGHTLFLGGLAAVDV 702
Query: 403 LKVLPETCLTF-YGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQK---------AEG 452
++ P L Y + ++ +V T ++D F++++LG L PP ++ A G
Sbjct: 703 VRGPPRGLLFLVYTSQKVRNAIVNTVQSDAFWREQLGKALDPPGSYEQLLPLDDLSSAAG 762
Query: 453 WKGLDRER--LLEIKFEDTERPASDVAISGLGWIS 485
L R L E RP +D+ + GLGW S
Sbjct: 763 PPRLSETRSYLFECYGRHRRRPKADLYVCGLGWTS 797
>gi|288574881|ref|ZP_06393238.1| GTPase-like protein [Dethiosulfovibrio peptidovorans DSM 11002]
gi|288570622|gb|EFC92179.1| GTPase-like protein [Dethiosulfovibrio peptidovorans DSM 11002]
Length = 378
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 117/280 (41%), Gaps = 49/280 (17%)
Query: 101 CYGCGAPLQTSESDAPGYV----DPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGN 156
C GCGA Q ++ D GY+ DPD V+C RC + H +
Sbjct: 9 CPGCGARFQRNDPDGAGYLPEGKDPDG-----------NVICKRCFQMKHYGVFK----- 52
Query: 157 GGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDF--NGSFLARIRDLAGANPIILV 214
K + +++ +S + I +VDI F + S L + DL P+ +V
Sbjct: 53 ------KASIKDSSIKKDISREVSGCSAIFLVVDICQFEISSSALDWVADLN--KPVFVV 104
Query: 215 VTKVDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKE-KKGR 273
+ K D+L K + W A+ + + + V+ S+ + + + + I+ G
Sbjct: 105 INKCDVLSKWITPGEIASW---ASERLPVPLHRVYPLSALNRKSVRDLRNRIEDAFPPGS 161
Query: 274 DVYILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGG 333
+ +LG+ NVGKS ++ L G+ P S +PGTTLG Q+ +
Sbjct: 162 KILLLGTTNVGKSTLLSGL---TGDDTPTI----------SRLPGTTLGITQVKSRHSAI 208
Query: 334 KLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVI 373
D PG+ + + A+ L L PQ +L QS++ +
Sbjct: 209 TYVDVPGLKEVNPWLGKLCADCLTGLIPQKKL--QSYSTV 246
>gi|268532912|ref|XP_002631584.1| Hypothetical protein CBG20762 [Caenorhabditis briggsae]
Length = 871
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 113/248 (45%), Gaps = 37/248 (14%)
Query: 96 SAVASCYGCGAPLQTSESDAPGYVDPDTYE---LKKKHHQFKTV--LCGRCRLLSHGHMI 150
++ C GCGA +S PG+V + E K +HQ LC RC LL + +
Sbjct: 320 ASAKKCSGCGANFHCKDSSLPGFVPLEILEKIDRKSSYHQKTEAQSLCKRCHLLQEHNFL 379
Query: 151 TAVGGNGGYAGGKQFVSADELREKLSHLRRE-KALIVKLVDIVDFNGSFLARIRDLAGA- 208
V V + +S L+++ ++L+V +VD+ D GS ++ + GA
Sbjct: 380 LNVN-----------VCDVDYGRMMSELKKQPESLVVLVVDVTDLPGSIYPKLAQIVGAR 428
Query: 209 NPIILVVTKVDLLPKGTDFNCVGDWVVEATTKKKL---------NVLSVHLTSSKSLAGI 259
P+I+V KVDLLP + W + T ++ + N+L L S+K+ GI
Sbjct: 429 RPMIVVGNKVDLLPPDAKTGYM--WRFKKTVERAVEKAGLLEHFNILHTALVSAKTGYGI 486
Query: 260 VGVASEIQKE----KKGR--DVYILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQ 313
+ +EI + K G D++++G N GKS NALL+ + A + R
Sbjct: 487 EELITEIYLKYTNVKLGMRGDIFLVGCTNAGKSTMFNALLQSDLCKVRAVDLVD--RATT 544
Query: 314 SAVPGTTL 321
S PGTT+
Sbjct: 545 SIWPGTTI 552
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 74/162 (45%), Gaps = 19/162 (11%)
Query: 329 FLGGGKLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLN 388
F G YDTPG ++ ++ ++L + P+ L+ ++ V +
Sbjct: 652 FAKGKWCYDTPGTVNENQVLSLFTLDELVNVTPRRVLKPRTCLVKA-------------- 697
Query: 389 GFTIFWGGLVRIDLLKV--LPETCLTFYGPKSLQVYMVPTDKADEFYQKELGV-TLTPPI 445
G ++ GG+ RID+ + LT + L + ++PT + +EFY+K LG L P
Sbjct: 698 GESLLIGGVGRIDIESIAGYSNVLLTTFTNDQLPLNVMPTHEVEEFYRKWLGTAALVVPQ 757
Query: 446 GK-QKAEGWKGLDRERLLEIKFEDTERPASDVAISGLGWISV 486
G + W GL+ R ++K E D+ +S +GW+ V
Sbjct: 758 GDVTRMASWPGLESGRRFDMKGRRDEG-CCDIVLSSIGWVMV 798
>gi|146318022|ref|YP_001197734.1| GTPase [Streptococcus suis 05ZYH33]
gi|145688828|gb|ABP89334.1| Predicted GTPase [Streptococcus suis 05ZYH33]
Length = 162
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 71/155 (45%), Gaps = 23/155 (14%)
Query: 332 GGKLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFT 391
G +YDTPG+ H+ A + A++L ++P+ ++ +++ + E T
Sbjct: 8 GSYIYDTPGIIHRHQMAHYLTAKNLKYISPRKEIKPKTYQLNPEQ--------------T 53
Query: 392 IFWGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAE 451
+F GL R D + + F+ LQ++ A EFYQK G L PP K+ E
Sbjct: 54 LFLAGLGRFDFVAGERQGFTAFFD-NELQLHRTKLQGASEFYQKHAGSLLVPPTSKELKE 112
Query: 452 GWKGLDRERLLEIKFEDTERPASDVAISGLGWISV 486
L+ +F E+ +DV SGLGWI V
Sbjct: 113 F------PELVRHEFTINEK--TDVVFSGLGWIRV 139
>gi|157872261|ref|XP_001684679.1| conserved hypothetical protein [Leishmania major strain Friedlin]
gi|68127749|emb|CAJ06052.1| conserved hypothetical protein [Leishmania major strain Friedlin]
Length = 918
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 96/267 (35%), Gaps = 86/267 (32%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVL----------------------- 137
C GCGA LQ DA GYV P E K L
Sbjct: 281 CPGCGALLQNLSDDAFGYVRPGEIEKYVAQRNAKAQLRHEYAARMAELQAHWAKHGRHVG 340
Query: 138 ------------------------CGRCRLLSHGHMITAVGGNGGYAGGKQFVSADELRE 173
C RC L N G G ++ SA + +
Sbjct: 341 EEWLDFMTQEEFDAFYRDTPRPFTCHRCHALE----------NLGVEGRRKVWSAPDFTD 390
Query: 174 KLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGA-NPIILVVTKVDLLPKGTDFNCVGD 232
+L L+ +K ++V +VDI DF GS + + L NP+I+ V K+D + + FN G
Sbjct: 391 QLRALKEKKCVVVLVVDITDFPGSMVYNLPGLISMNNPVIIAVNKMDCI-RNRSFNYAGK 449
Query: 233 ----------------WVVEATTKKKL---NVLSVHLTSSKSLAGIVGVASEIQ------ 267
WV++ + L + V S+K GI + S I+
Sbjct: 450 DRSVAACLVSESYVRRWVMDIAVQFGLPQHQIKKVVPLSAKRGWGITHLISAIEDAANLN 509
Query: 268 --KEKKGRDVYILGSANVGKSAFINAL 292
+ K Y +G ANVGKS+ INA+
Sbjct: 510 LRRPHKPLPTYFVGVANVGKSSVINAM 536
>gi|225550942|ref|ZP_03771891.1| GTP-binding domain protein [Ureaplasma urealyticum serovar 2 str.
ATCC 27814]
gi|225380096|gb|EEH02458.1| GTP-binding domain protein [Ureaplasma urealyticum serovar 2 str.
ATCC 27814]
Length = 276
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 107/258 (41%), Gaps = 37/258 (14%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA L E + GY P K + KT LC RC L H + + V N
Sbjct: 7 CKGCGAFLN-DEINTIGYT-P-------KLNDTKTNLCQRCFKLIHYNKLEKVHTNLN-- 55
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ + +L I ++DI+D + + ++ II +V K+DL
Sbjct: 56 --------QNIKNTIDNLDFSNLQIFMVLDILDLEHTIIDELKKYQE--QIIFLVNKIDL 105
Query: 221 LPKGTDFNCVGDWVVEATTKKKLN---VLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYI 277
LP + V + V++ N ++ V S+ SL ++ KK + ++
Sbjct: 106 LPHRYNSELVNENVIKTLVDHGFNNPQIVYVSTHSNTSLKKVIDCIKN-ATNKKQKSIF- 163
Query: 278 LGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYD 337
LG +NVGKS+ INALL A K + S TT+ +I+ L ++ D
Sbjct: 164 LGKSNVGKSSLINALL---------ALNKIKTKLTISNYTNTTINLNKIN--LLEHQIID 212
Query: 338 TPGVHLHHRQAAVVHAED 355
PGV + V ED
Sbjct: 213 APGVCFNENILNYVRDED 230
>gi|417027645|ref|ZP_11947697.1| GTPase YqeH [Lactobacillus rhamnosus MTCC 5462]
gi|328479665|gb|EGF48837.1| GTPase YqeH [Lactobacillus rhamnosus MTCC 5462]
Length = 125
Score = 62.8 bits (151), Expect = 5e-07, Method: Composition-based stats.
Identities = 38/113 (33%), Positives = 53/113 (46%), Gaps = 14/113 (12%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA LQT++ PGY+ T K + C RC L H + I V
Sbjct: 12 CIGCGAILQTTDPKKPGYLPAATL---AKAEADDDIYCQRCFRLRHYNEIAPVT------ 62
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIIL 213
++ D+ L+ + ALIV ++DI DFNGS + + G NP+IL
Sbjct: 63 -----LTDDDFLRLLNAIGESNALIVNVIDIFDFNGSVIPGLHRFVGDNPVIL 110
>gi|255027220|ref|ZP_05299206.1| GTP-binding protein YqeH [Listeria monocytogenes FSL J2-003]
Length = 161
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 71/155 (45%), Gaps = 23/155 (14%)
Query: 332 GGKLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFT 391
G L DTPG+ HH+ A + L A+ P+ ++ F + E T
Sbjct: 6 GNVLVDTPGIINHHQMAHFIDTTTLKAITPKKEVKPAVFQLNEEQ--------------T 51
Query: 392 IFWGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKAE 451
+F G L R+D + L Y +L ++ +KAD Y+++ G+ L PP E
Sbjct: 52 LFLGALARLDYVSG-GRKSLVVYVSNNLPIHRTKLEKADALYERQAGIVLQPP----TEE 106
Query: 452 GWKGLDRERLLEIKFEDTERPASDVAISGLGWISV 486
G + L +L+ F E+ +D+ SGLGW+++
Sbjct: 107 GMETL--PKLVPYSFTIKEK--ADIVFSGLGWVTI 137
>gi|70934171|ref|XP_738352.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56514498|emb|CAH86244.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi]
Length = 340
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/256 (21%), Positives = 117/256 (45%), Gaps = 36/256 (14%)
Query: 164 QFVSAD--ELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANP---IILVVTKV 218
++V AD + L ++K+L++ ++DI + + L + + N II +V K+
Sbjct: 93 KYVEADRNNIMNNLIKKMKKKSLVLYIIDITNIENTILPELY-IGCKNKDINIIWLVNKI 151
Query: 219 DLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEK-------- 270
D LPK T+ + + W + K + H+ ++ + I +E+
Sbjct: 152 DCLPKSTNLDIIKIWFRNMIRQIK----NTHINDLIFISALKCYNYNILEERMKTYIDID 207
Query: 271 KGRDVYILGSANVGKSAFINALLKKMGERDPAAAMAQKYR--PIQSAVPGTTLGPIQIDA 328
KG D+YI+G NVGKS+F+N+ LK + + +++ + S +P TTL +
Sbjct: 208 KGIDIYIVGCVNVGKSSFLNSFLKFINYKHIGDIYSKRKKGGVTVSNIPYTTLNY-NVFK 266
Query: 329 FLGGGKLYDTPGVHLHHRQAAVVHAE-DLPALAPQSRLRGQSFAVISETETNNEFKSHGL 387
+ DT G+ ++ +++++ + DL ++ +++ ++ + +
Sbjct: 267 LKKDVNIIDTIGIPTKYQYSSILYKDIDLNSIIINKKIQPFTYKLKDD------------ 314
Query: 388 NGFTIFWGGLVRIDLL 403
++I G L I+L+
Sbjct: 315 --YSIILGSLCYINLI 328
>gi|309803213|ref|ZP_07697310.1| GTP-binding protein [Lactobacillus iners LactinV 11V1-d]
gi|308164721|gb|EFO66971.1| GTP-binding protein [Lactobacillus iners LactinV 11V1-d]
Length = 174
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 78/173 (45%), Gaps = 26/173 (15%)
Query: 314 SAVPGTTLGPIQIDAFLGGGKLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVI 373
S PGTTL I+I G L DTPG+ + A+ + +L +AP+ +L+ ++ +
Sbjct: 5 SKFPGTTLDSIKI-PLNEGHYLVDTPGILSKKQMASRLTGSELELVAPKKQLKPATYQL- 62
Query: 374 SETETNNEFKSHGLNGFTIFWGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFY 433
L G TIF GL RID +K P + T Y + L ++ T ADEFY
Sbjct: 63 -------------LPGQTIFLAGLGRIDFIKG-PASGFTIYVARDLYLHRTKTINADEFY 108
Query: 434 QKELGVTLTPPIGKQKAEGWKGLDRERLLEIKFEDTERPASDVAISGLGWISV 486
K L PP KG + +E+ SD+ G+G+I+V
Sbjct: 109 LKHKSDLLNPPCDNDDLGALKGQ--------LYSTSEK--SDILFGGVGFITV 151
>gi|167973339|ref|ZP_02555616.1| GTP-binding domain protein [Ureaplasma urealyticum serovar 5 str.
ATCC 27817]
gi|167973843|ref|ZP_02556120.1| GTP-binding domain protein [Ureaplasma urealyticum serovar 11 str.
ATCC 33695]
gi|168362872|ref|ZP_02696046.1| GTP-binding domain protein [Ureaplasma urealyticum serovar 13 str.
ATCC 33698]
gi|188024028|ref|ZP_02996786.1| GTP-binding domain protein [Ureaplasma urealyticum serovar 7 str.
ATCC 27819]
gi|188524341|ref|ZP_03004373.1| ribosome biogenesis GTPase YqeH [Ureaplasma urealyticum serovar 12
str. ATCC 33696]
gi|195867501|ref|ZP_03079504.1| ribosome biogenesis GTPase YqeH [Ureaplasma urealyticum serovar 9
str. ATCC 33175]
gi|198273761|ref|ZP_03206295.1| ribosome biogenesis GTPase YqeH [Ureaplasma urealyticum serovar 4
str. ATCC 27816]
gi|225550534|ref|ZP_03771483.1| GTP-binding domain protein [Ureaplasma urealyticum serovar 2 str.
ATCC 27814]
gi|225551498|ref|ZP_03772444.1| GTP-binding domain protein [Ureaplasma urealyticum serovar 8 str.
ATCC 27618]
gi|171903183|gb|EDT49472.1| GTP-binding domain protein [Ureaplasma urealyticum serovar 13 str.
ATCC 33698]
gi|184208966|gb|EDU06009.1| GTP-binding domain protein [Ureaplasma urealyticum serovar 5 str.
ATCC 27817]
gi|188019057|gb|EDU57097.1| GTP-binding domain protein [Ureaplasma urealyticum serovar 7 str.
ATCC 27819]
gi|188998016|gb|EDU67113.1| GTP-binding domain protein [Ureaplasma urealyticum serovar 11 str.
ATCC 33695]
gi|195660000|gb|EDX53380.1| ribosome biogenesis GTPase YqeH [Ureaplasma urealyticum serovar 12
str. ATCC 33696]
gi|195660745|gb|EDX53999.1| ribosome biogenesis GTPase YqeH [Ureaplasma urealyticum serovar 9
str. ATCC 33175]
gi|198249516|gb|EDY74298.1| ribosome biogenesis GTPase YqeH [Ureaplasma urealyticum serovar 4
str. ATCC 27816]
gi|225379313|gb|EEH01678.1| GTP-binding domain protein [Ureaplasma urealyticum serovar 8 str.
ATCC 27618]
gi|225379688|gb|EEH02050.1| GTP-binding domain protein [Ureaplasma urealyticum serovar 2 str.
ATCC 27814]
Length = 361
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 107/257 (41%), Gaps = 35/257 (13%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA L E + GY P K + KT LC RC L H + + V N
Sbjct: 7 CKGCGAFLN-DEINTIGYT-P-------KLNDTKTNLCQRCFKLIHYNKLEKVHTNLN-- 55
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ + +L I ++DI+D + + ++ II +V K+DL
Sbjct: 56 --------QNIKNTIDNLDFSNLQIFMVLDILDLEHTIIDELKKYQE--QIIFLVNKIDL 105
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQK--EKKGRDVYIL 278
LP + V + V++ N + S+ S + V I+ KK + ++ L
Sbjct: 106 LPHRYNSELVNENVIKTLVDHGFNNPQIVYVSTHSNTSLKKVMDCIKNATNKKQKSIF-L 164
Query: 279 GSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDT 338
G +NVGKS+ INALL A K + S+ TT+ +I+ L ++ D
Sbjct: 165 GKSNVGKSSLINALL---------ALNKIKTKLTISSYTNTTINLNKIN--LLEHQIIDA 213
Query: 339 PGVHLHHRQAAVVHAED 355
PGV + V ED
Sbjct: 214 PGVCFNENILNYVRDED 230
>gi|309805283|ref|ZP_07699335.1| GTP-binding protein [Lactobacillus iners LactinV 09V1-c]
gi|308165517|gb|EFO67748.1| GTP-binding protein [Lactobacillus iners LactinV 09V1-c]
Length = 174
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 78/173 (45%), Gaps = 26/173 (15%)
Query: 314 SAVPGTTLGPIQIDAFLGGGKLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVI 373
S PGTTL I+I G L DTPG+ + A+ + +L +AP+ +L+ ++ +
Sbjct: 5 SKFPGTTLDSIKI-PLNEGHYLVDTPGILSKKQMASRLTGSELELVAPKKQLKPATYQL- 62
Query: 374 SETETNNEFKSHGLNGFTIFWGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFY 433
L G TIF GL RID +K P + T Y + L ++ T ADEFY
Sbjct: 63 -------------LPGQTIFLAGLGRIDFIKG-PASGFTIYVARDLYLHRTKTINADEFY 108
Query: 434 QKELGVTLTPPIGKQKAEGWKGLDRERLLEIKFEDTERPASDVAISGLGWISV 486
K L PP KG + +E+ SD+ G+G+I+V
Sbjct: 109 LKHKSDLLNPPCDSDDLGALKGQ--------LYSTSEK--SDILFGGVGFITV 151
>gi|209554067|ref|YP_002284911.1| ribosome biogenesis GTPase YqeH [Ureaplasma urealyticum serovar 10
str. ATCC 33699]
gi|209541568|gb|ACI59797.1| ribosome biogenesis GTPase YqeH [Ureaplasma urealyticum serovar 10
str. ATCC 33699]
Length = 361
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 107/257 (41%), Gaps = 35/257 (13%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA L E + GY P K + KT LC RC L H + + V N
Sbjct: 7 CKGCGAFLN-DEINTIGYT-P-------KLNDTKTNLCQRCFKLIHYNKLEKVHTNLN-- 55
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
++ + +L I ++DI+D + + ++ II +V K+DL
Sbjct: 56 --------KNIKNTIDNLDFSNLQIFMVLDILDLEHTIIDELKKYQE--QIIFLVNKIDL 105
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQK--EKKGRDVYIL 278
LP + V + V++ N + S+ S + V I+ KK + ++ L
Sbjct: 106 LPHRYNSELVNENVIKTLVDHGFNNPQIVYVSTHSNTSLKKVMDCIKNATNKKQKSIF-L 164
Query: 279 GSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDT 338
G +NVGKS+ INALL A K + S+ TT+ +I+ L ++ D
Sbjct: 165 GKSNVGKSSLINALL---------ALNKIKTKLTISSYTNTTINLNKIN--LLEHQIIDA 213
Query: 339 PGVHLHHRQAAVVHAED 355
PGV + V ED
Sbjct: 214 PGVCFNENILNYVRDED 230
>gi|84999858|ref|XP_954650.1| GTPase [Theileria annulata]
gi|65305648|emb|CAI73973.1| GTPase, putative [Theileria annulata]
Length = 550
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 93/418 (22%), Positives = 164/418 (39%), Gaps = 55/418 (13%)
Query: 9 FLSPLSLPHHFTNSTPKFLKTYTKPTLIVCKSTLSPETQFESDGAGAAAPTRGDRFLELQ 68
F +SLP +F VC L+ ES G++ R R +E++
Sbjct: 71 FYKDISLPKRCIGCGAQFQTIDQNKPGYVCSDVLN-----ESGARGSSKLPR-IRGVEIE 124
Query: 69 KAKEAAKVVVRDSKKKRKKKDKVLKVNSAVASCYGCGAPLQTSESDAPGYVDPDTYELKK 128
A E +V + + KK +V+ C C D VD L K
Sbjct: 125 NAPEGVEVNKAELGRFSTKKRRVI--------CQRCYKLQYYKRLDTKNEVDSSRETLVK 176
Query: 129 --------KHHQFKTVLCGRCRLLSHGHMITAVGGNGGYAGGK-QFVSADELREKLSHLR 179
K + K V+ ++T + A + S E+ ++
Sbjct: 177 EFLDGENLKRNALKRVISSNLTAKQFPVLMTQLESETNIANNSVKISSTSEIISNMATRI 236
Query: 180 REKALIVKLVDIVDFNGSFLARIRDLAGAN---PIILVVTKVDLLPKGTDFNCVGDWVVE 236
+ +LI+ ++D+ + S + + +A N +I + K+D+LPK D + + W+
Sbjct: 237 KNNSLILFVLDLTNLEISVIPELY-IALRNRTLEVIWIANKIDVLPKVVDHSEIKRWLKS 295
Query: 237 AT----TKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGSANVGKSAFINAL 292
K +V+ + + + E + R++Y++G+ NVGKS F+N
Sbjct: 296 VVRHIGNSKSSDVILISSSKGTGFDKLEHRFKEYLRVGDPRNIYVVGATNVGKSTFVNRF 355
Query: 293 L-----KKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPGVHLHHRQ 347
L K +G + ++ R SA+PGTTL I+ G KL DTPG+ + +
Sbjct: 356 LDFIKYKHVGTLNLRRSVGGTTR---SAIPGTTLEFIEF-GLPSGFKLIDTPGIPIISQI 411
Query: 348 AAVVHAE-DLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRIDLLK 404
++++ DL ++A T+T N G T+ G L R+DL++
Sbjct: 412 PSLLYKPVDLISIA--------------MTKTINPLYIKLDEGQTLLIGALGRVDLVQ 455
>gi|363733412|ref|XP_420579.3| PREDICTED: uncharacterized protein C4orf14 [Gallus gallus]
Length = 581
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 114/268 (42%), Gaps = 19/268 (7%)
Query: 66 ELQKAKEAAKVVVRDSKKKRKKKDKVLKVNSAVASCYGCGAPLQTSESDAPGYVDPDTYE 125
E +++ A + R+ + R D L V + C GCGA LQ ++ APG+V D Y
Sbjct: 14 EAVRSRAAGRDGAREGNRVRGVAD--LSVPPSGVGCSGCGAELQCRDAAAPGFVPADKYR 71
Query: 126 L----KKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYAGGKQFVSADELREKLSHLRRE 181
+ +C RC +L HG + + + V + LR H R
Sbjct: 72 SLCAGPDGTAGLRDAVCQRCWVLEHGGRVVRLDLP---PEQHRAVLSAALRSPPRHGRGP 128
Query: 182 KALIVKLVDIV--DFNGSFLARIRDLAGANPIILVVTKVDLLPKGT--DFNCVGDWVVEA 237
L + V + A + A +++V KVDLLP + + V A
Sbjct: 129 LLLYLLDVLELPDPVLPQLPALLSPEVPAAGLLVVGNKVDLLPADSPGHLGRLRQRVTAA 188
Query: 238 TTK---KKLNVLSVHLTSSKSLAGIVGVASEIQKE-KKGRDVYILGSANVGKSAFINALL 293
+ + ++ V L S+K+ GI + S +Q+ K DVY+LG+ N GKS NALL
Sbjct: 189 CLQAGISRAQLVDVRLVSAKTGFGIERLVSRLQRSWKCAGDVYLLGATNSGKSTLFNALL 248
Query: 294 KKMGERDPAAAMAQKYRPIQSAVPGTTL 321
+ + + A R S+ PGTTL
Sbjct: 249 --LSDYCKSRAPDVVNRATVSSWPGTTL 274
>gi|296486559|tpg|DAA28672.1| TPA: hypothetical protein LOC539773 [Bos taurus]
gi|440903359|gb|ELR54030.1| hypothetical protein M91_21392 [Bos grunniens mutus]
Length = 694
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 109/262 (41%), Gaps = 55/262 (20%)
Query: 100 SCYGCGAPLQTSESDAPGYVDPDTYELK-KKHHQFKTVLCGRCRLLSHGHMITAVGGNGG 158
+C GCGA L + PGY+ + + + + +C RC LL H +
Sbjct: 140 NCSGCGAELHCQDPGVPGYLPSEKFNSAVAEEGGLERTVCQRCWLLVHHRRALRLQ---- 195
Query: 159 YAGGKQFVSADELREKLSH-LRR-EKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVT 216
VS + E +S LRR E AL++ +VD++D + L + L G +I++
Sbjct: 196 -------VSQGQFLELVSAALRRPEPALVLYMVDLLDLPDTLLPHLPALVGPKQLIVLGN 248
Query: 217 KVDLLPKGTDF-----------NCVGDWVV-----------------------EATTKKK 242
KVDLLP+ T C+G ++ +K
Sbjct: 249 KVDLLPQDTPNYRQRLRERLWDECIGAGLLPPRGYRRAQRSSGDRPRGGEDNANLPSKSS 308
Query: 243 LNVLSVHLTSSKSLAGIVGVASEIQKEKKGR-DVYILGSANVGKSAFINALLKKMGERDP 301
+ V L S+K+ G+ + S +Q+ + R DVY++GS N GKS N LL E D
Sbjct: 309 TVLRDVRLISAKTGYGVEELISALQRSWRYRGDVYLVGSTNAGKSTLFNTLL----ESDY 364
Query: 302 AAAMAQKY--RPIQSAVPGTTL 321
A + R S PGTTL
Sbjct: 365 CIAKGAEAIDRATISPWPGTTL 386
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 56/129 (43%), Gaps = 10/129 (7%)
Query: 370 FAVISETETNNEFKSHGL--------NGFTIFWGGLVRIDLLKVLPETCLTFYGPKSLQV 421
++++E E N +H + G +F G L RID LK T L V
Sbjct: 508 LSLLTEKEVNIVLPTHSIIPRTFMLKPGMVLFLGALGRIDFLKGNQSAWFTVVASNFLPV 567
Query: 422 YMVPTDKADEFYQKELGVTL--TPPIGKQKAEGWKGLDRERLLEIKFEDTERPASDVAIS 479
++ DKAD YQK G TL P G+++ G+ L E + + +D+ S
Sbjct: 568 HITSLDKADTMYQKHAGHTLLKVPVGGEERMAGFPPLVAEDITLDEGLGESEAVADIKFS 627
Query: 480 GLGWISVEP 488
GW++V P
Sbjct: 628 SAGWVAVTP 636
>gi|47197602|emb|CAF88049.1| unnamed protein product [Tetraodon nigroviridis]
Length = 360
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 96/193 (49%), Gaps = 23/193 (11%)
Query: 138 CGRCRLLSHGHMITAVGGNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGS 197
C RC LLSH H K V+A++ R + +R +AL++ +VD++D S
Sbjct: 21 CQRCHLLSHHH-----------KALKLQVTAEQYRAVVQSIRPLRALVLLIVDLLDVPDS 69
Query: 198 FLARIRDLAGANPIILVV-TKVDLLPKGTDFNC------VGDWVVEATTKKKLNVLSVHL 250
+ + +L G N ++V+ KVDLLP + + + + EA + V VHL
Sbjct: 70 IVPDLAELVGTNKHVVVLGNKVDLLPADSPNHLQRIRRRLSGYCREAGFGDQ--VADVHL 127
Query: 251 TSSKSLAGIVGVASEIQKE-KKGRDVYILGSANVGKSAFINALLKKMGERDPAAAMAQKY 309
S+K+ G+ + S +Q+ K DVY++G AN GKS N LL+ + A+ + +K
Sbjct: 128 ISAKTGYGVEALVSSLQRSWKYNGDVYLVGVANAGKSTLFNTLLESDYCKSRASEVTRK- 186
Query: 310 RPIQSAVPGTTLG 322
S PGTTL
Sbjct: 187 -ATISPWPGTTLN 198
>gi|17537249|ref|NP_496845.1| Protein Y48E1B.2, isoform a [Caenorhabditis elegans]
gi|15718314|emb|CAB07689.2| Protein Y48E1B.2, isoform a [Caenorhabditis elegans]
Length = 890
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 105/245 (42%), Gaps = 31/245 (12%)
Query: 93 KVNSAVASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITA 152
++ ++ C GCGA +S PG+V + E K LC RC LL + +
Sbjct: 322 EIPASSRKCTGCGANFHCKDSSLPGFVPLEILE-KIDRRSVDQSLCKRCHLLQEHNFLLN 380
Query: 153 VGGNGGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGAN-PI 211
V D R ++ ++L+V +VD+ D GS R+ + G+ P+
Sbjct: 381 V----------NVCDVDYTRMMGELKKQPESLVVLVVDVTDLPGSIYPRLASVVGSRRPM 430
Query: 212 ILVVTKVDLLPKGTDFNCVGDWVVEATTKK---------KLNVLSVHLTSSKSLAGIVGV 262
I+V KVDLLP D W + T ++ ++L L S+K+ GI +
Sbjct: 431 IVVGNKVDLLP--PDARTGYMWRFKKTVERAVEKAGLLENFHILHTALVSAKTGYGIEEL 488
Query: 263 ASEIQ------KEKKGRDVYILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAV 316
+EI K D++++G N GKS NALL+ + A + R S
Sbjct: 489 ITEIYLKYTNVKLGMRGDIFLVGCTNAGKSTMFNALLQSDLCKVRAVDLVD--RATTSIW 546
Query: 317 PGTTL 321
PGTT+
Sbjct: 547 PGTTI 551
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 78/175 (44%), Gaps = 27/175 (15%)
Query: 329 FLGGGKLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLN 388
F G YDTPG ++ ++ E+L + P+ LR + V
Sbjct: 655 FARGKWCYDTPGTVNDNQCLSLFTLEELLNVTPRRVLRPHTVLVKP-------------- 700
Query: 389 GFTIFWGGLVRIDLLKVLP--ETCLTFYGPKSLQVYMVPTDKADEFYQKELGV-TLTPPI 445
G ++ GG+ R+D+ +V + LT + + L + ++PT + ++FY+K LG L P
Sbjct: 701 GESLLIGGVARLDIEQVARAGQVLLTTFVNEQLPLNVMPTHECEDFYRKWLGTRALLVPQ 760
Query: 446 GKQKAEG----WKGLDRE-----RLLEIKFE-DTERPASDVAISGLGWISVEPVR 490
G++ A G W G E R E++ E D+ +S +GW+ V R
Sbjct: 761 GQEAAGGRMTSWPGFRGENGEMGRRFEMRGRLKDEGGCCDIVLSSIGWVMVTSER 815
>gi|327279942|ref|XP_003224714.1| PREDICTED: uncharacterized protein C4orf14 homolog [Anolis
carolinensis]
Length = 630
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 96/230 (41%), Gaps = 18/230 (7%)
Query: 100 SCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGN--- 156
SC GCGA L + PGY+ + Y K+ + +C RC LL H V +
Sbjct: 98 SCPGCGAELHCRDPALPGYLPSEKYRSLKEEEAEEETVCQRCWLLVHHRQALKVEVSREE 157
Query: 157 -GGYAGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVV 215
G G R L L + + + + D G L G +LV+
Sbjct: 158 FHGLVGAALKAPPRHNRPPLVLLLADLLDLPESLLSPDLPG--------LLGDQAHLLVL 209
Query: 216 -TKVDLLPKGTD--FNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKK- 271
K DLLP + + + +A + L VHL S+K+ G+ + + +Q+ K
Sbjct: 210 GNKADLLPGDSPDYLRRLRGSLRQACAQAGLRAEEVHLISAKTGFGLEELITRLQRSWKF 269
Query: 272 GRDVYILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTL 321
DVY++G+ N GKS NALL + + A +R S PGTTL
Sbjct: 270 NGDVYLVGATNTGKSTLFNALLH--SDYCKSRASQAIHRATISPWPGTTL 317
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 64/140 (45%), Gaps = 20/140 (14%)
Query: 389 GFTIFWGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTL--TPPIG 446
G T+F G L RID L+ + + L V+ +KAD YQK G TL P G
Sbjct: 466 GMTLFLGALGRIDYLQGDSSSWFSVVASNLLPVHFTTLEKADALYQKHAGQTLLKIPMGG 525
Query: 447 KQKAEGWKGLDRERLLEIKFE--DTERPASDVAISGLGWISVEPVRRSIRNSDINLESTS 504
+++ + + L + ++ E D + +D+ +S GW++V ++
Sbjct: 526 EERMKDFPPLISQ---DVTLEGIDEAQAVADIKLSTAGWVAV-------------TAHSN 569
Query: 505 GELHLAVHVPKPVEVFVRNP 524
++HL + PK E+ +R P
Sbjct: 570 NKIHLRCYTPKGTELTIRKP 589
>gi|84000349|ref|NP_001033277.1| nitric oxide-associated protein 1 [Bos taurus]
gi|93204548|sp|Q32LB9.1|NOA1_BOVIN RecName: Full=Nitric oxide-associated protein 1
gi|81673530|gb|AAI09655.1| Chromosome 4 open reading frame 14 ortholog [Bos taurus]
Length = 694
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 109/262 (41%), Gaps = 55/262 (20%)
Query: 100 SCYGCGAPLQTSESDAPGYVDPDTYELK-KKHHQFKTVLCGRCRLLSHGHMITAVGGNGG 158
+C GCGA L + PGY+ + + + + +C RC LL H +
Sbjct: 140 NCSGCGAELHCQDPGVPGYLPSEKFNSAVAEEGGLERTVCQRCWLLVHHRRALRLQ---- 195
Query: 159 YAGGKQFVSADELREKLSH-LRR-EKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVT 216
VS + E +S LRR E AL++ +VD++D + L + L G +I++
Sbjct: 196 -------VSQGQFLELVSAALRRPEPALVLYMVDLLDLPDTLLPHLPALVGPKQLIVLGN 248
Query: 217 KVDLLPKGTDF-----------NCVGDWVV-----------------------EATTKKK 242
KVDLLP+ T C+G ++ +K
Sbjct: 249 KVDLLPQDTPNYRQRLRERLWDECIGAGLLPPRGYRRAQRSSGDRPRGGEDNANLPSKSS 308
Query: 243 LNVLSVHLTSSKSLAGIVGVASEIQKEKKGR-DVYILGSANVGKSAFINALLKKMGERDP 301
+ V L S+K+ G+ + S +Q+ + R DVY++GS N GKS N LL E D
Sbjct: 309 TVLRDVRLISAKTGYGVEELISALQRSWRYRGDVYLVGSTNAGKSTLFNTLL----ESDY 364
Query: 302 AAAMAQKY--RPIQSAVPGTTL 321
A + R S PGTTL
Sbjct: 365 CIAKGAEAIDRATISPWPGTTL 386
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 57/129 (44%), Gaps = 10/129 (7%)
Query: 370 FAVISETETNNEFKSHGL--------NGFTIFWGGLVRIDLLKVLPETCLTFYGPKSLQV 421
++++E E N +H + G +F G L RID LK T L V
Sbjct: 508 LSLLTEKEVNIVLPTHSIIPRTFMLKPGMVLFLGALGRIDFLKGNQSAWFTVVASNFLPV 567
Query: 422 YMVPTDKADEFYQKELGVTL--TPPIGKQKAEGWKGLDRERLLEIKFEDTERPASDVAIS 479
++ DKAD YQK G TL P G+++ G+ L E + + +D+ +S
Sbjct: 568 HITSLDKADTMYQKHAGHTLLKVPVGGEERMAGFPPLVAEDITLDEGLGESEAVADIKLS 627
Query: 480 GLGWISVEP 488
GW++V P
Sbjct: 628 SAGWVAVTP 636
>gi|74196806|dbj|BAE43128.1| unnamed protein product [Mus musculus]
Length = 435
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 136/307 (44%), Gaps = 67/307 (21%)
Query: 66 ELQKAKEAAKVVVRDSKKKRKKKD--KVLKV----NSAVAS----CYGCGAPLQTSESDA 115
+LQ+ KE ++ R+ + ++K + + L V +++V C GCGA L
Sbjct: 90 QLQQEKERERLQQREERLQQKLRAGFRTLPVPEFPDASVPPSGIYCSGCGAELHCQHPGL 149
Query: 116 PGYVDPDTY-ELKKKHHQFKTVLCGRCRLL-SHGHMITAVGGNGGYAGGKQFVSADELRE 173
PGY+ + + + + +C RC LL HG + + VS D+ E
Sbjct: 150 PGYLPEEKFRDAAQAEGGPARTVCQRCWLLVHHGRAL------------RLQVSRDQYLE 197
Query: 174 KLSH-LRRE-KALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDLLPK-GTDF--- 227
+S LRR AL++ +V+++D + L + L G +I++ KVDLLP+ T +
Sbjct: 198 LVSAALRRPGPALVLYMVNLLDLPDALLPDLPKLVGPKQLIVLGNKVDLLPQDATGYLKR 257
Query: 228 -------NCV-----------------GDWVVE------ATTKKKLNVLSVHLTSSKSLA 257
+C+ GD +E +++ + V V L S+K+
Sbjct: 258 LRKRLWDDCIRAGLVVAPGHQGPQYPAGDEPLEEIKNQNPSSRSRTVVKDVRLISAKTGY 317
Query: 258 GIVGVASEIQKEKKGR-DVYILGSANVGKSAFINALLKKMGERDPAAAMAQKY--RPIQS 314
G+ + S +Q+ + R DVY++G+ N GKS N LL E D A + R S
Sbjct: 318 GVEEMISALQRSWRYRGDVYLVGTTNAGKSTLFNTLL----ESDYCTAKGSEAIDRATIS 373
Query: 315 AVPGTTL 321
PGTTL
Sbjct: 374 PWPGTTL 380
>gi|126331705|ref|XP_001369899.1| PREDICTED: uncharacterized protein C4orf14 homolog [Monodelphis
domestica]
Length = 685
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 108/250 (43%), Gaps = 47/250 (18%)
Query: 79 RDSKKKRK-----KKDKVLKVNSAVASCYGCGAPLQTSESDAPGYVDPDTY---ELKKKH 130
R++++KR+ D + V+ +C GCGA L + PGY+ + Y E +
Sbjct: 115 RNTREKRQHPMVGSPDPTVPVSGV--NCSGCGAELHCQDPLVPGYLPSEKYRSLEAQADE 172
Query: 131 HQFKTVLCGRCRLLSHGHMITAVGGNGGYAGGKQFVSADELREKL-SHLRRE-KALIVKL 188
+C RC LL H V V ++ RE + + LRR AL++ +
Sbjct: 173 GGLARAVCQRCWLLVHHQRALRVR-----------VDREQYRELVRAALRRPGPALVLYI 221
Query: 189 VDIVDFNGSFLARIRDLAGANPIILVVTKVDLLPKGTDF-----------NCVGDWVVEA 237
+D+ D S L + DL G ++L+ KVDLLP + C +
Sbjct: 222 MDVFDLPDSLLPDLPDLLGPKQLMLLGNKVDLLPGDSPGYLRRLRERLWDECARAGLQLV 281
Query: 238 TTKKK------------LNVLSVHLTSSKSLAGIVGVASEIQKEKKGR-DVYILGSANVG 284
TK K V V L S+K+ G+ + S +Q+ + R DVY++GS N G
Sbjct: 282 PTKAKGRPAEAGRTGPQCQVQDVLLISAKTGFGVEEMISAVQRSWRYRGDVYLVGSTNAG 341
Query: 285 KSAFINALLK 294
KS N LL+
Sbjct: 342 KSTLFNTLLQ 351
>gi|205374258|ref|ZP_03227057.1| GTP-binding protein YqeH [Bacillus coahuilensis m4-4]
Length = 117
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 63/135 (46%), Gaps = 24/135 (17%)
Query: 391 TIFWGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQKA 450
T+F+GGL R D +K ++ + + L ++ +KAD Y + LG L PP G+++
Sbjct: 6 TLFFGGLARFDFIKGERQSFVCHFS-NELNIHRTKLEKADLLYDQHLGELLQPP-GEEEM 63
Query: 451 EGWKGLDRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLA 510
+ + L R + + +D+ SGLGWI+V I A
Sbjct: 64 DHFPELVRHEFV------IKEGKTDIVFSGLGWITVNDPGAKI----------------A 101
Query: 511 VHVPKPVEVFVRNPM 525
HVPK V VF+RN +
Sbjct: 102 AHVPKGVSVFLRNSL 116
>gi|74178704|dbj|BAE34011.1| unnamed protein product [Mus musculus]
Length = 693
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 134/306 (43%), Gaps = 65/306 (21%)
Query: 66 ELQKAKEAAKVVVRDSKKKRKKKD--KVLKV----NSAVAS----CYGCGAPLQTSESDA 115
+LQ+ KE ++ R+ + ++K + + L V +++V C GCGA L
Sbjct: 97 QLQQEKERERLQQREERLQQKLRAGFRTLPVPEFPDASVPPSGIYCSGCGAELHCQHPGL 156
Query: 116 PGYVDPDTY-ELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYAGGKQFVSADELREK 174
PGY+ + + + + +C RC LL H G A Q VS D+ E
Sbjct: 157 PGYLPEEKFRDAAQAEGGPARTVCQRCWLLVHH----------GRALRLQ-VSRDQYLEL 205
Query: 175 LSH-LRRE-KALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDLLPKGTDF----- 227
+S LRR AL++ +V+++D + L + L G +I++ KVDLLP+
Sbjct: 206 VSAALRRPGPALVLYMVNLLDLPDALLPDLPKLVGPKQLIVLGNKVDLLPQDAPGYLKRL 265
Query: 228 ------NCV-----------------GDWVVE------ATTKKKLNVLSVHLTSSKSLAG 258
+C+ GD +E +++ + V V L S+K+ G
Sbjct: 266 RKRLWDDCIRAGLVVAPGHQGPQYPAGDEPLEEIKNQNPSSRSRTVVKDVRLISAKTGYG 325
Query: 259 IVGVASEIQKEKKGR-DVYILGSANVGKSAFINALLKKMGERDPAAAMAQKY--RPIQSA 315
+ + S +Q+ + R DVY++G+ N GKS N LL E D A + R S
Sbjct: 326 VEEMISALQRSWRYRGDVYLVGTTNAGKSTLFNTLL----ESDYCTAKGSEAIDRATISP 381
Query: 316 VPGTTL 321
PGTTL
Sbjct: 382 WPGTTL 387
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 68/164 (41%), Gaps = 24/164 (14%)
Query: 372 VISETETNNEFKSHGL--------NGFTIFWGGLVRIDLLKVLPETCLTFYGPKSLQVYM 423
+++E E N +H + G +F GG+ RID L+ T L V++
Sbjct: 510 LLTEKEINTVLPTHSIIPRTFVLKPGMVLFLGGIARIDFLQGNQSAWFTVVASSFLPVHI 569
Query: 424 VPTDKADEFYQKELG--VTLTPPIGKQKAEGWKGLDRERLLEIKFEDTERPASDVAISGL 481
DKAD Y+K G + L P GK++ + L E + +K +D+ S
Sbjct: 570 TSLDKADALYEKHAGHELLLVPMGGKERMAQFPPLVAEDIT-LKGGGKFEAVADIKFSSA 628
Query: 482 GWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVEVFVRNPM 525
GW++V P + G LHL H P+ + V P+
Sbjct: 629 GWVAVTPY-------------SEGTLHLRGHTPEGTALTVHPPV 659
>gi|9790049|ref|NP_062810.1| nitric oxide-associated protein 1 [Mus musculus]
gi|81906657|sp|Q9JJG9.1|NOA1_MOUSE RecName: Full=Nitric oxide-associated protein 1
gi|7670340|dbj|BAA95022.1| unnamed protein product [Mus musculus]
gi|12857220|dbj|BAB30935.1| unnamed protein product [Mus musculus]
gi|16877845|gb|AAH17154.1| RIKEN cDNA 2610024G14 gene [Mus musculus]
gi|148705986|gb|EDL37933.1| RIKEN cDNA 2610024G14, isoform CRA_a [Mus musculus]
Length = 693
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 134/306 (43%), Gaps = 65/306 (21%)
Query: 66 ELQKAKEAAKVVVRDSKKKRKKKD--KVLKV----NSAVAS----CYGCGAPLQTSESDA 115
+LQ+ KE ++ R+ + ++K + + L V +++V C GCGA L
Sbjct: 97 QLQQEKERERLQQREERLQQKLRAGFRTLPVPEFPDASVPPSGIYCSGCGAELHCQHPGL 156
Query: 116 PGYVDPDTY-ELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYAGGKQFVSADELREK 174
PGY+ + + + + +C RC LL H G A Q VS D+ E
Sbjct: 157 PGYLPEEKFRDAAQAEGGPARTVCQRCWLLVHH----------GRALRLQ-VSRDQYLEL 205
Query: 175 LSH-LRRE-KALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDLLPKGTDF----- 227
+S LRR AL++ +V+++D + L + L G +I++ KVDLLP+
Sbjct: 206 VSAALRRPGPALVLYMVNLLDLPDALLPDLPKLVGPKQLIVLGNKVDLLPQDAPGYLKRL 265
Query: 228 ------NCV-----------------GDWVVE------ATTKKKLNVLSVHLTSSKSLAG 258
+C+ GD +E +++ + V V L S+K+ G
Sbjct: 266 RKRLWDDCIRAGLVVAPGHQGPQYPAGDEPLEEIKNQNPSSRSRTVVKDVRLISAKTGYG 325
Query: 259 IVGVASEIQKEKKGR-DVYILGSANVGKSAFINALLKKMGERDPAAAMAQKY--RPIQSA 315
+ + S +Q+ + R DVY++G+ N GKS N LL E D A + R S
Sbjct: 326 VEEMISALQRSWRYRGDVYLVGTTNAGKSTLFNTLL----ESDYCTAKGSEAIDRATISP 381
Query: 316 VPGTTL 321
PGTTL
Sbjct: 382 WPGTTL 387
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 68/164 (41%), Gaps = 24/164 (14%)
Query: 372 VISETETNNEFKSHGL--------NGFTIFWGGLVRIDLLKVLPETCLTFYGPKSLQVYM 423
+++E E N +H + G +F GG+ RID L+ T L V++
Sbjct: 510 LLTEKEINTVLPTHSIIPRTFVLKPGMVLFLGGIARIDFLQGNQSAWFTVVASNFLPVHI 569
Query: 424 VPTDKADEFYQKELG--VTLTPPIGKQKAEGWKGLDRERLLEIKFEDTERPASDVAISGL 481
DKAD Y+K G + L P GK++ + L E + +K +D+ S
Sbjct: 570 TSLDKADALYEKHAGHELLLVPMGGKERMAQFPPLVAEDIT-LKGGGKFEAVADIKFSSA 628
Query: 482 GWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVEVFVRNPM 525
GW++V P + G LHL H P+ + V P+
Sbjct: 629 GWVAVTPY-------------SEGTLHLRGHTPEGTALTVHPPV 659
>gi|335293563|ref|XP_003356996.1| PREDICTED: uncharacterized protein C4orf14 homolog [Sus scrofa]
Length = 809
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 85/322 (26%), Positives = 135/322 (41%), Gaps = 72/322 (22%)
Query: 57 APTRGDRFLELQKAKEAAKVV------------VRDSKKKRKKKDKVLKVNSAVA----S 100
APT D+ E+Q+ +E + +R +++ ++ + V + VA +
Sbjct: 84 APTLQDQLREVQQRQEENERQMQQRREERRQQKLRAARRVQRAQPVVGHPDPTVAPSGLN 143
Query: 101 CYGCGAPLQTSESDAPGYVDPDTY--ELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGG 158
C GCGA L + PGY+ + + + +C RC LL H +
Sbjct: 144 CSGCGAELHCQDPGVPGYLPSEKFLRAAAQADGGLARTVCQRCWLLVHHRRALRLQ---- 199
Query: 159 YAGGKQFVSADELREKLSH-LRR-EKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVT 216
VS ++ E +S LRR E AL++ +VD++D + L + L G +I++
Sbjct: 200 -------VSPEKYLELVSAALRRPEPALVLYMVDLLDLPDALLRHLPALVGPKQLIVLGN 252
Query: 217 KVDLLPKGT-------------DFNCVG-------------------DWVVEA--TTKKK 242
KVDLLP+ D VG D +A + K +
Sbjct: 253 KVDLLPQDAPGYRQRIRERLWDDCARVGLLPPPGSRRSQHPGRKQPRDQAEKANHSAKSR 312
Query: 243 LNVLSVHLTSSKSLAGIVGVASEIQKEKKGR-DVYILGSANVGKSAFINALLKKMGERDP 301
+ V L S+K+ G+ + S +Q+ + R DVY++G+ N GKS N LL E D
Sbjct: 313 AVLRDVRLISAKTGYGVEELISALQRSWRYRGDVYLVGATNAGKSTLFNTLL----ESDY 368
Query: 302 AAAMAQKY--RPIQSAVPGTTL 321
A + R SA PGTTL
Sbjct: 369 CIAKGAEAIDRATISAWPGTTL 390
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 58/139 (41%), Gaps = 15/139 (10%)
Query: 389 GFTIFWGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTL--TPPIG 446
G +F G + RID L+ T L V++ DKAD Y+K G TL P G
Sbjct: 538 GMVLFLGAIGRIDFLQGNQSAWFTVVASNFLPVHITSLDKADTVYKKHAGHTLLKVPVGG 597
Query: 447 KQKAEGWKGLDRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGE 506
K++ G+ L E + + +D+ S GW++V P
Sbjct: 598 KERMAGFPPLVAEDITLDEGLGESEAVADIKFSSAGWVAVTP-------------QFKDR 644
Query: 507 LHLAVHVPKPVEVFVRNPM 525
LHL H+P+ + VR P+
Sbjct: 645 LHLRGHMPQGTFLTVRPPL 663
>gi|291401759|ref|XP_002717113.1| PREDICTED: mitochondrial nitric oxide synthase-like [Oryctolagus
cuniculus]
Length = 671
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 92/222 (41%), Gaps = 38/222 (17%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGA L + PGY+ + + + Q +C RC LL H +
Sbjct: 126 CSGCGAELHCRDPGVPGYLPSEKFARAAQDGQLARAVCQRCWLLVHHRRALRL------- 178
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLAR-IRDLAGANPIILVVTKVD 219
+ A L++ + LRR +V + + L R + L G +I++ KVD
Sbjct: 179 ---RVSRAQYLQQVSAALRRPGPALVLYLLDLLDLPDPLLRHLPALVGPKQLIVLGNKVD 235
Query: 220 LLPK-GTDFN----------CVGDWVV---------------EATTKKKLNVLSVHLTSS 253
LLP+ D+ CV ++ E + + V V L S+
Sbjct: 236 LLPQDAPDYRRRLRQRLWDECVRAGLLPAPGHRGPQPGAGGDEEQSASRTVVRDVRLVSA 295
Query: 254 KSLAGIVGVASEIQKEKKGR-DVYILGSANVGKSAFINALLK 294
K+ G+ + S +Q+ + R DVY++G+ N GKS N LL+
Sbjct: 296 KTGYGVEELISALQRAWRYRGDVYLVGATNAGKSTLFNTLLE 337
Score = 43.9 bits (102), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 79/193 (40%), Gaps = 30/193 (15%)
Query: 335 LYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFW 394
YDTPG+ + ++ +++ + P + ++F + G +F
Sbjct: 471 FYDTPGISKENCILNLLTEKEVNIVLPTQSIIPRTFVLKP--------------GMVLFL 516
Query: 395 GGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTL--TPPIGKQKAEG 452
G + R+D L+ T L V++ D+AD YQK G TL P G+++
Sbjct: 517 GAIGRLDFLQGKESAWFTVVASNFLPVHVTYLDRADALYQKHAGHTLLQVPMGGEERMTE 576
Query: 453 WKGLDRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVH 512
+ L E + +K +D+ S GW++V P +L T LHL +
Sbjct: 577 FPPLVGED-ITLKEGLGSEAVADIKFSSAGWVAVTP----------HLHDT---LHLRGY 622
Query: 513 VPKPVEVFVRNPM 525
P+ + VR P+
Sbjct: 623 TPQGTVLTVRPPL 635
>gi|90085443|dbj|BAE91462.1| unnamed protein product [Macaca fascicularis]
Length = 631
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 80/193 (41%), Gaps = 29/193 (15%)
Query: 335 LYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFW 394
YDTPG+ + ++ +++ + P + ++F + G +F
Sbjct: 427 FYDTPGITKENCILNLLTEKEVNIVLPTQSIVPRTFVLKP--------------GMVLFL 472
Query: 395 GGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTL--TPPIGKQKAEG 452
G + RID L+ T +L V++ D+AD YQK G TL P G+++ G
Sbjct: 473 GAIGRIDFLQGNQSAWFTVVASNTLPVHITSLDRADTLYQKHAGHTLLQVPMGGRERMAG 532
Query: 453 WKGLDRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVH 512
+ L E ++ + +D+ S GW+SV P + G LHL +
Sbjct: 533 FPPLVAEDIMLKEGRGGSEAVADIKFSSAGWVSVTP-------------NVKGRLHLRGY 579
Query: 513 VPKPVEVFVRNPM 525
P+ + VR P+
Sbjct: 580 TPEGTVLTVRPPL 592
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 108/261 (41%), Gaps = 54/261 (20%)
Query: 100 SCYGCGAPLQTSESDAPGYVDPDTY-ELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGG 158
+C GCGA L + PGY+ D + + + +C RC LL H +
Sbjct: 73 NCSGCGAELHCQDPGVPGYLPCDKFLRMAEADGGLARTVCQRCWLLVHHRRALRLQ---- 128
Query: 159 YAGGKQFVSADELREKLSH-LRRE-KALIVKLVDIVDFNGSFLARIRDLAGANPIILVVT 216
VS ++ E +S LRR +L++ +VD++D + L + L G +I++
Sbjct: 129 -------VSREQYLELVSAALRRPGPSLVLYMVDLLDLPDALLPDLPALVGPKQLIVLGN 181
Query: 217 KVDLLPKGTDF-----------NCVGDWVVEATTKK----------------------KL 243
KVDLLP+ +C ++ A + +
Sbjct: 182 KVDLLPQDAPGYRQRLRERLWDDCARAGLLLAPGHQGPQIPVKNEPQDGENSNPPNWSRT 241
Query: 244 NVLSVHLTSSKSLAGIVGVASEIQKEKKGR-DVYILGSANVGKSAFINALLKKMGERDPA 302
V V L S+K+ G+ + S +Q+ + R DVY++G+ N GKS N LL E D
Sbjct: 242 VVRDVRLISAKTGYGVEELISALQRSWRYRGDVYLVGATNAGKSTLFNTLL----ESDYC 297
Query: 303 AAMAQKY--RPIQSAVPGTTL 321
A + R S PGTTL
Sbjct: 298 TAKGSEAIDRATISPWPGTTL 318
>gi|343525594|ref|ZP_08762549.1| GTP-binding family protein [Streptococcus constellatus subsp.
pharyngis SK1060 = CCUG 46377]
gi|343395864|gb|EGV08402.1| GTP-binding family protein [Streptococcus constellatus subsp.
pharyngis SK1060 = CCUG 46377]
Length = 120
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 53/122 (43%), Gaps = 14/122 (11%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCGAP+QT D GY E K + + C RC L H + IT V
Sbjct: 6 CIGCGAPIQTKHKDKMGYTPQSALE---KGLETGELYCQRCFRLRHYNEITDV------- 55
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
Q D LR L + AL+V +VDI DFNGS + + N ++LV K
Sbjct: 56 ---QLTDDDFLR-LLHEVGDSNALVVNVVDIFDFNGSVIPGLPRFVAGNDVLLVGNKKIF 111
Query: 221 LP 222
P
Sbjct: 112 FP 113
>gi|383422155|gb|AFH34291.1| mitochondrial nitric oxide synthase [Macaca mulatta]
Length = 698
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 79/193 (40%), Gaps = 29/193 (15%)
Query: 335 LYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFW 394
YDTPG+ + ++ +++ + P + ++F + G +F
Sbjct: 494 FYDTPGITKENCILNLLTEKEVNIVLPTQSIVPRTFVLKP--------------GMVLFL 539
Query: 395 GGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTL--TPPIGKQKAEG 452
G + RID L+ T +L V++ D+AD YQK G TL P GK++ G
Sbjct: 540 GAIGRIDFLQGNQSAWFTVVASNTLPVHITSLDRADTLYQKHAGHTLLQVPMGGKERMAG 599
Query: 453 WKGLDRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVH 512
+ L E ++ +D+ S GW+SV P + G LHL +
Sbjct: 600 FPPLVAEDIMLKGGRGGSEAVADIKFSSAGWVSVTP-------------NVKGRLHLRGY 646
Query: 513 VPKPVEVFVRNPM 525
P+ + VR P+
Sbjct: 647 TPEGTVLTVRPPL 659
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 108/261 (41%), Gaps = 54/261 (20%)
Query: 100 SCYGCGAPLQTSESDAPGYVDPDTY-ELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGG 158
+C GCGA L + PGY+ D + + + +C RC LL H +
Sbjct: 140 NCSGCGAELHCQDPGVPGYLPCDKFLRMAEADGGLARTVCQRCWLLVHHRRALRLQ---- 195
Query: 159 YAGGKQFVSADELREKLSH-LRRE-KALIVKLVDIVDFNGSFLARIRDLAGANPIILVVT 216
VS ++ E +S LRR +L++ +VD++D + L + L G +I++
Sbjct: 196 -------VSREQYLELVSSALRRPGPSLVLYMVDLLDLPDALLPDLPALVGPKQLIVLGN 248
Query: 217 KVDLLPKGTDF-----------NCVGDWVVEATTKK----------------------KL 243
KVDLLP+ +C ++ A + +
Sbjct: 249 KVDLLPQDAPGYRQRLRERLWDDCARAGLLLAPGHQGPQIPVKNEPQDGENSNPPNWSRT 308
Query: 244 NVLSVHLTSSKSLAGIVGVASEIQKEKKGR-DVYILGSANVGKSAFINALLKKMGERDPA 302
V V L S+K+ G+ + S +Q+ + R DVY++G+ N GKS N LL E D
Sbjct: 309 VVRDVRLISAKTGYGVEELISALQRSWRYRGDVYLVGATNAGKSTLFNTLL----ESDYC 364
Query: 303 AAMAQKY--RPIQSAVPGTTL 321
A + R S PGTTL
Sbjct: 365 TAKGSEAIDRATISPWPGTTL 385
>gi|323342059|ref|ZP_08082292.1| GTP-binding protein [Erysipelothrix rhusiopathiae ATCC 19414]
gi|336066172|ref|YP_004561030.1| GTP-binding protein YqeH [Erysipelothrix rhusiopathiae str.
Fujisawa]
gi|322464484|gb|EFY09677.1| GTP-binding protein [Erysipelothrix rhusiopathiae ATCC 19414]
gi|334296118|dbj|BAK31989.1| GTP-binding protein YqeH [Erysipelothrix rhusiopathiae str.
Fujisawa]
Length = 340
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 102/266 (38%), Gaps = 42/266 (15%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG+ LQT ++ GY + C C L H V +
Sbjct: 6 CVGCGSVLQTEDTMGRGYAKA-----------IENDYCQSCFRLKHYRDFKRVKADVNDG 54
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
+F+ R + I+ ++DI+ N S + ++LVV K DL
Sbjct: 55 TTLEFI------------ERFEGHILWVLDIMHLNQSMHTGLLRALRNKSVVLVVNKRDL 102
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGS 280
LPK N + + ++ + + ++++ + S+ + + ++ +G
Sbjct: 103 LPKSVSNNKLTNAIMRSLKDEDVSLMDIVFVSALKKNTLESLNPYLEDAPCA----FVGC 158
Query: 281 ANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPG 340
N GKS+ +NAL MG+ D + S V TT + I+ +YDTPG
Sbjct: 159 VNAGKSSLLNAL---MGKNDLSV----------SPVASTTADVLHIET--ENYDVYDTPG 203
Query: 341 VHLHHRQAAVVHAEDLPALAPQSRLR 366
+ E+L LAPQ L+
Sbjct: 204 LSNETNLLTKFTDENLVMLAPQKTLK 229
>gi|146093650|ref|XP_001466936.1| conserved hypothetical protein [Leishmania infantum JPCM5]
gi|134071300|emb|CAM69985.1| conserved hypothetical protein [Leishmania infantum JPCM5]
Length = 918
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 102/261 (39%), Gaps = 74/261 (28%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYE----LKKKHHQFKTVLCGRCRLLS-----HG---- 147
C GCGA LQ DA GYV P E + + Q + R L HG
Sbjct: 281 CPGCGALLQNLSEDAFGYVRPGEIEKYVAQRNEKAQLRHEYAARMAELQAHWAKHGRHVG 340
Query: 148 -------------------------HMITAVGGNGGYAGGKQFVSADELREKLSHLRREK 182
H A+ N G G ++ SA + ++L L+ +K
Sbjct: 341 EEWLDFMTQEEFDAFYRDTPRPFTCHRCHALE-NLGVEGRRKVWSAPDFTDQLRALKEKK 399
Query: 183 ALIVKLVDIVDFNGSFLARIRDLAG----ANPIILVVTKVDLLPKGTDFN---------- 228
++V +VDI DF GS + DL G N +I+ V K+D + + FN
Sbjct: 400 CVVVLVVDITDFPGSM---VYDLPGLISMNNSVIIAVNKMDCI-RNRSFNYASKDRSVAA 455
Query: 229 C------VGDWVVEATTKKKL---NVLSVHLTSSKSLAGIVGVASEIQ--------KEKK 271
C V WV++ + L + V S+K GI + S I+ + K
Sbjct: 456 CLVSESYVRRWVMDIAVQFGLPQHQIKKVVPLSAKRGWGITHLISAIEDAANLNLRRPHK 515
Query: 272 GRDVYILGSANVGKSAFINAL 292
Y +G ANVGKS+ INA+
Sbjct: 516 PLPTYFVGVANVGKSSVINAM 536
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 92/215 (42%), Gaps = 33/215 (15%)
Query: 284 GKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGK-LYDTPGVH 342
G + +NA+ +G P A A++ R Q G T P + D G +YDTPG+
Sbjct: 603 GTTVAVNAVRLSLG---PTAHTAKQER--QRLSEGAT-APGKADDVAGTQTYIYDTPGLL 656
Query: 343 LHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFWGGLVRIDL 402
H Q +++ + + Q F + L G T+F GGL +D+
Sbjct: 657 PHWHQRSLLTLLQMRRTLIRKFRNPQCFLL--------------LPGHTLFLGGLAAVDV 702
Query: 403 LKVLPETCLTF-YGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGKQK---------AEG 452
++ P L Y + ++ +V T ++D F++++LG L PP ++ A G
Sbjct: 703 VRGPPRGLLFLVYTSQKVRNAIVNTVQSDAFWREQLGKALDPPGSYEQLLPLDDLSTAAG 762
Query: 453 WKGLDRER--LLEIKFEDTERPASDVAISGLGWIS 485
L R L E RP +D+ + GLGW S
Sbjct: 763 RPRLSETRSYLFECYGRHRRRPKADLYVCGLGWTS 797
>gi|341899488|gb|EGT55423.1| hypothetical protein CAEBREN_16192 [Caenorhabditis brenneri]
Length = 927
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 111/244 (45%), Gaps = 36/244 (14%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYE-LKKKHHQFKT-------VLCGRCRLLSHGHMITA 152
C GCGA +S PG++ + E + KK + + LC RC L+ + +
Sbjct: 372 CTGCGANFHCKDSSLPGFLPLEILEKIDKKSNSYHQKSEAPLQSLCKRCHLIQEHNFLLN 431
Query: 153 VGGNGGYAGGKQFVSADELREKLSHLRRE-KALIVKLVDIVDFNGSFLARIRDLAGAN-P 210
+ V + +S L+++ ++L+V +VD+ D GS ++ + G+ P
Sbjct: 432 MN-----------VCDVDYSRMMSELKKQPESLVVLVVDVTDLPGSIYPKLAQIVGSRRP 480
Query: 211 IILVVTKVDLLPKGTD------FNCVGDWVVE-ATTKKKLNVLSVHLTSSKSLAGIVGVA 263
+I+V KVDLLP F + VE A + N+L L S+K+ GI +
Sbjct: 481 MIVVGNKVDLLPPDAKTGYMYRFKKTVERAVEKAGLLENFNILHTALVSAKTGYGIEELI 540
Query: 264 SEIQKE----KKGR--DVYILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVP 317
+EI + K G D++++G N GKS NALL+ + A + R S P
Sbjct: 541 TEIYLKYTNVKLGMRGDIFLVGCTNAGKSTMFNALLQSDLCKVRAVDLID--RATTSIWP 598
Query: 318 GTTL 321
GTT+
Sbjct: 599 GTTI 602
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 71/165 (43%), Gaps = 24/165 (14%)
Query: 329 FLGGGKLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLN 388
F G YDTPG ++ + ++L + P+ L+ ++ V
Sbjct: 701 FTKGKWCYDTPGTVNENQVLSYFTLDELVNVTPRRVLKPRTCIVKP-------------- 746
Query: 389 GFTIFWGGLVRIDLLKV--LPETCLTFYGPKSLQVYMVPTDKADEFYQKELG--VTLTPP 444
G ++ GG+ RID+ + LT + + L + ++PT + +EFY++ LG + P
Sbjct: 747 GESLLIGGVGRIDIESIAGYSNVLLTTFANEQLPLNLMPTHEVEEFYRRWLGKPALVVPQ 806
Query: 445 IGKQKAEGWKGLDRE-----RLLEIKFEDTERPASDVAISGLGWI 484
+ W GL E R E+K E D+ +S +GW+
Sbjct: 807 GDLNRMASWPGLKGENGENGRRFEMKGRRDEG-CCDIVLSSIGWV 850
>gi|68005503|ref|XP_670047.1| DNAJ domain protein [Plasmodium berghei strain ANKA]
gi|56484922|emb|CAI03510.1| DNAJ domain protein, putative [Plasmodium berghei]
Length = 225
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 101/219 (46%), Gaps = 21/219 (9%)
Query: 271 KGRDVYILGSANVGKSAFINALLKKMGERDPAAAMAQKYR--PIQSAVPGTTLGPIQIDA 328
KG D+YI+G NVGKS+F+N+ LK + + ++ + S +P TTL +
Sbjct: 6 KGIDIYIVGCVNVGKSSFLNSFLKFINYKHIGDIYNKRKKGGVTVSNIPYTTLNY-NVFK 64
Query: 329 FLGGGKLYDTPGVHLHHRQAAVVHAE-DLPALAPQSRLRGQSFAVISETETNNEFKSHGL 387
+ DT G+ ++ +++++ + DL ++ +++ ++ + +
Sbjct: 65 LKKDINIIDTIGIPTKYQYSSILYKDIDLNSIIINKKIQPFTYKLKDD------------ 112
Query: 388 NGFTIFWGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGK 447
++I G L I+L+ LTFY + ++M ++K + F +K+ L PP
Sbjct: 113 --YSIILGSLCYINLI-YGNFALLTFYISNKVTIHMCRSEKIENFLEKKKCSFLYPPHVY 169
Query: 448 QKAEGWKGLDRERLLEIKFEDTERPASDVAISGLGWISV 486
+ K + +++ +D E D+ IS L W S+
Sbjct: 170 SDFDLLKPFVKHT-VKVLGKDYE-SIDDIVISDLCWFSI 206
>gi|344228955|gb|EGV60841.1| hypothetical protein CANTEDRAFT_96285 [Candida tenuis ATCC 10573]
Length = 521
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 120/289 (41%), Gaps = 57/289 (19%)
Query: 94 VNSAVASCYGCGAPLQTSESDAPGYV-----------------------DPDTYEL---- 126
+++ V+ C CG LQ++ + APGY+ DP+ L
Sbjct: 21 LSNLVSKCSSCGIQLQSTSAAAPGYIPLVSHKPFQRQEDTIYNKYTKHLDPEDMALLNLH 80
Query: 127 ----KKKHHQFKTVL------CGRCRLLSHGHMITAVGGNGGYAGGKQFVSADELREKLS 176
+ +H + K C RCR + H H +V Q +S + +K+
Sbjct: 81 PTAAESQHPRHKHTSDSSYKDCLRCRQIKHKHQFNSVEET-------QNLSTTSIIDKVE 133
Query: 177 HLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDLL-PKGTDFNCVGDWVV 235
H+ + +V + +DF L + L I+V+TK DL+ P+ +
Sbjct: 134 HINGQ---MVYAISAIDFP---LGINKQLVNQYKPIVVITKCDLIFPQKETMAKFPFYKE 187
Query: 236 EATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKGRDVYILGSANVGKSAFINA-LLK 294
T K ++ +V L SS+ G+ + S +Q + +I+G N GKS+ I+ LL+
Sbjct: 188 YMTAKFEIPPTNVFLVSSRRDWGLQTLNSVLQSNPQ--KYFIVGDINSGKSSLISKLLLR 245
Query: 295 KMGE-RDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPGVH 342
G+ R A + P S +PG T G +Q + +L D PG++
Sbjct: 246 DRGDTRMKYDVWAARNGPGISNLPGFTRGELQFS--ISNYELIDLPGLN 292
>gi|432111608|gb|ELK34710.1| hypothetical protein MDA_GLEAN10015808 [Myotis davidii]
Length = 602
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 129/305 (42%), Gaps = 56/305 (18%)
Query: 60 RGDRFLELQKAKEAAKVVVRDSKKKRKKKDKVLKVNSAVA-----------SCYGCGAPL 108
R R L ++ +E + + R +++++K L+V+ V +C GCGA L
Sbjct: 3 RQLRQLHQRQEEEERQKLQRREERRQQKLRASLRVHRVVGHPDPTVPSSGLNCSGCGAEL 62
Query: 109 QTSESDAPGYVDPDTY-ELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYAGGKQFVS 167
+ PGY+ + + + + +C RC LL H + Q
Sbjct: 63 HCQDPGLPGYLPSEKFLSARAQADGLARTVCQRCWLLVHHRRALRL----------QVSR 112
Query: 168 ADELREKLSHLRRE-KALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDLLPKGTD 226
L+ + LRR AL++ +VD++D + L + L GA +I++ KVDLLP+
Sbjct: 113 EQYLQLVSTALRRPGPALVLYMVDLLDLPDALLPDLPALVGAKQLIVLGNKVDLLPQDAP 172
Query: 227 F-----------NCVGDWVV--------------EATTKKKLNVL-SVHLTSSKSLAGIV 260
+CV + + + K VL V L S+K+ G+
Sbjct: 173 GYLQRLRERLWDDCVRAGLQRPPSRGGPPGGKENSSPSAKSGTVLRDVRLISAKTGYGVE 232
Query: 261 GVASEIQKEKKGR-DVYILGSANVGKSAFINALLKKMGERDPAAAMAQKY--RPIQSAVP 317
+ S +Q+ + R DVY++G+ N GKS N LL E D A + R S+ P
Sbjct: 233 ELISALQRSWRYRGDVYLVGATNAGKSTLFNTLL----ESDYCIAKGAEAIDRATISSWP 288
Query: 318 GTTLG 322
GTTL
Sbjct: 289 GTTLN 293
Score = 45.4 bits (106), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 66/169 (39%), Gaps = 29/169 (17%)
Query: 370 FAVISETETNNEFKSHGL--------NGFTIFWGGLVRIDLLKVLPETCLTFYGPKSLQV 421
+++E E N +H + G +F G L RID L+ T L V
Sbjct: 414 LKLLTEKEVNIVLPTHSIIPRTFVLKPGTVLFLGALGRIDFLQGSQSAWFTVVASNFLPV 473
Query: 422 YMVPTDKADEFYQKELGVTL--TPPIGKQKAEGWKGLDRERLLEIKFED---TERPASDV 476
++ +KAD YQK G L P GK++ + L E +I E+ +D+
Sbjct: 474 HITSLEKADTIYQKHAGDLLLKVPMGGKERMAEFPPLVAE---DITLEEGLGKPEAVADI 530
Query: 477 AISGLGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVEVFVRNPM 525
S GW++V P LHL + P+ + VR P+
Sbjct: 531 KFSSAGWVAVTP-------------QFKDRLHLRGYTPQGTVLTVRPPL 566
>gi|402869723|ref|XP_003898897.1| PREDICTED: nitric oxide-associated protein 1 [Papio anubis]
Length = 698
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 79/193 (40%), Gaps = 29/193 (15%)
Query: 335 LYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFW 394
YDTPG+ + ++ +++ + P + ++F + G +F
Sbjct: 494 FYDTPGITKENCILNLLTEKEVNIVLPTQSIVPRTFVLKP--------------GMVLFL 539
Query: 395 GGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTL--TPPIGKQKAEG 452
G + RID L+ T +L V++ D+AD YQK G TL P GK++ G
Sbjct: 540 GAIGRIDFLQGNQSAWFTVVASNTLPVHITSLDRADTLYQKHAGHTLLQVPMGGKERMAG 599
Query: 453 WKGLDRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVH 512
+ L E ++ + +D+ S GW+SV P + LHL +
Sbjct: 600 FPPLVAEDIMLKEGRGGSEAVADIKFSSAGWVSVTP-------------NVKDRLHLRGY 646
Query: 513 VPKPVEVFVRNPM 525
P+ + VR P+
Sbjct: 647 TPEGTVLTVRPPL 659
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 107/261 (40%), Gaps = 54/261 (20%)
Query: 100 SCYGCGAPLQTSESDAPGYVDPDTY-ELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGG 158
+C GCGA L + PGY+ D + + +C RC LL H +
Sbjct: 140 NCSGCGAELHCQDPGVPGYLPCDKFLRTAEADGGLARTVCQRCWLLVHHRRALRLQ---- 195
Query: 159 YAGGKQFVSADELREKLSH-LRRE-KALIVKLVDIVDFNGSFLARIRDLAGANPIILVVT 216
VS ++ E +S LRR +L++ +VD++D + L + L G +I++
Sbjct: 196 -------VSREQYLELVSAALRRPGPSLVLYMVDLLDLPDALLPDLPALVGPKQLIVLGN 248
Query: 217 KVDLLPKGTDF-----------NCVGDWVVEATTKK----------------------KL 243
KVDLLP+ +C ++ A + +
Sbjct: 249 KVDLLPQDAPGYRQRLRERLWDDCARAGLLLAPGHQGPQIPVKNEPQDGENSNPPNWSRT 308
Query: 244 NVLSVHLTSSKSLAGIVGVASEIQKEKKGR-DVYILGSANVGKSAFINALLKKMGERDPA 302
V V L S+K+ G+ + S +Q+ + R DVY++G+ N GKS N LL E D
Sbjct: 309 VVRDVRLISAKTGYGVEELISALQRSWRYRGDVYLVGATNAGKSTLFNTLL----ESDYC 364
Query: 303 AAMAQKY--RPIQSAVPGTTL 321
A + R S PGTTL
Sbjct: 365 TAKGSEAIDRATISPWPGTTL 385
>gi|380790571|gb|AFE67161.1| nitric oxide-associated protein 1 [Macaca mulatta]
Length = 698
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 79/193 (40%), Gaps = 29/193 (15%)
Query: 335 LYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFW 394
YDTPG+ + ++ +++ + P + ++F + G +F
Sbjct: 494 FYDTPGITKENCILNLLTEKEVNIVLPTQSIVPRTFVLKP--------------GMVLFL 539
Query: 395 GGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTL--TPPIGKQKAEG 452
G + RID L+ T +L V++ D+AD YQK G TL P GK++ G
Sbjct: 540 GAIGRIDFLQGNQSAWFTVVASNTLPVHITSLDRADTLYQKHAGHTLLQVPMGGKERMAG 599
Query: 453 WKGLDRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVH 512
+ L E ++ + +D+ S GW+SV P + LHL +
Sbjct: 600 FPPLVAEDIMLKEGRGGSEAVADIKFSSAGWVSVTP-------------NVKDRLHLRGY 646
Query: 513 VPKPVEVFVRNPM 525
P+ + VR P+
Sbjct: 647 TPEGTVLTVRPPL 659
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 108/261 (41%), Gaps = 54/261 (20%)
Query: 100 SCYGCGAPLQTSESDAPGYVDPDTY-ELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGG 158
+C GCGA L + PGY+ D + + + +C RC LL H +
Sbjct: 140 NCSGCGAELHCQDPGVPGYLPCDKFLRMAEADGGLARTVCQRCWLLVHHRRALRLQ---- 195
Query: 159 YAGGKQFVSADELREKLSH-LRRE-KALIVKLVDIVDFNGSFLARIRDLAGANPIILVVT 216
VS ++ E +S LRR +L++ +VD++D + L + L G +I++
Sbjct: 196 -------VSREQYLELVSAALRRPGPSLVLYMVDLLDLPDALLPDLPALVGPKQLIVLGN 248
Query: 217 KVDLLPKGTDF-----------NCVGDWVVEATTKK----------------------KL 243
KVDLLP+ +C ++ A + +
Sbjct: 249 KVDLLPQDAPGYRQRLRERLWDDCARAGLLLAPGHQGPQIPVKNEPQDGENSNPPNWSRT 308
Query: 244 NVLSVHLTSSKSLAGIVGVASEIQKEKKGR-DVYILGSANVGKSAFINALLKKMGERDPA 302
V V L S+K+ G+ + S +Q+ + R DVY++G+ N GKS N LL E D
Sbjct: 309 VVRDVRLISAKTGYGVEELISALQRSWRYRGDVYLVGATNAGKSTLFNTLL----ESDYC 364
Query: 303 AAMAQKY--RPIQSAVPGTTL 321
A + R S PGTTL
Sbjct: 365 TAKGSEAIDRATISPWPGTTL 385
>gi|344288412|ref|XP_003415944.1| PREDICTED: uncharacterized protein C4orf14-like [Loxodonta
africana]
Length = 700
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 108/263 (41%), Gaps = 56/263 (21%)
Query: 100 SCYGCGAPLQTSESDAPGYVDPDTY--ELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNG 157
+C GCGA L D PGY+ + + + +C RC LL H V
Sbjct: 140 NCSGCGAELHCQNPDVPGYLPSEKFLSAAAQADGGLARTVCQRCWLLVHHRRALRVQ--- 196
Query: 158 GYAGGKQFVSADELREKLSH-LRRE-KALIVKLVDIVDFNGSFLARIRDLAGANPIILVV 215
VS ++ RE +S LRR AL++ +VD++D + L + L G +I++
Sbjct: 197 --------VSREQYRELVSSALRRPGPALVLYMVDLLDLPDALLPDLPALVGPKQLIVLG 248
Query: 216 TKVDLLPKGTD-----------FNCVGDWVV-----------------------EATTKK 241
KVDLLP+ +C ++ + K
Sbjct: 249 NKVDLLPQDAPGYRRRLRERLWNDCARAGLLPPRRYRGPQGPGGDGPGDREENPNPSAKP 308
Query: 242 KLNVLSVHLTSSKSLAGIVGVASEIQKEKKGR-DVYILGSANVGKSAFINALLKKMGERD 300
+ + V L S+K+ G+ + S +Q+ + R DVY++G+ N GKS N LL E D
Sbjct: 309 RTVLRDVRLISAKTGYGVEELISALQRSWRYRGDVYLVGATNAGKSTLFNTLL----ESD 364
Query: 301 PAAAMAQKY--RPIQSAVPGTTL 321
A + R S PGTTL
Sbjct: 365 YCIAKGAEAIDRATISTWPGTTL 387
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 69/165 (41%), Gaps = 25/165 (15%)
Query: 372 VISETETNNEFKSHGL--------NGFTIFWGGLVRIDLLKVLPETCLTFYGPKSLQVYM 423
+++E E N +H + G +F G + RID L+ T L V++
Sbjct: 512 LLTEKEVNVVLPTHSIVPRTFVLKPGMVLFLGAIGRIDFLQGNHSAWFTVVASNILPVHI 571
Query: 424 VPTDKADEFYQKELGVTL--TPPIGKQKAEGWKGLDRERL-LEIKFEDTERPASDVAISG 480
D+AD YQK G TL P G+++ + L E + LE ++E +D+ S
Sbjct: 572 TSLDRADAVYQKHAGHTLLKVPMGGEERMAEFPPLVAEDITLEEGLGESE-AVADIKFSS 630
Query: 481 LGWISVEPVRRSIRNSDINLESTSGELHLAVHVPKPVEVFVRNPM 525
GW++V P LHL + P+ + VR P+
Sbjct: 631 AGWVTVTP-------------QFKDRLHLRGYTPQGTVLTVRPPL 662
>gi|259481754|tpe|CBF75572.1| TPA: conserved hypothetical protein [Aspergillus nidulans FGSC A4]
Length = 634
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 76/337 (22%), Positives = 122/337 (36%), Gaps = 99/337 (29%)
Query: 101 CYGCGAPLQTSESDAPGYVD---------------------------------------- 120
C GCGA QT E + PG+
Sbjct: 70 CPGCGAYSQTVEPNEPGFYSKTRKQTRKLLLEAQKEPLKESATQEAVFTVQKAVEEAEIA 129
Query: 121 ----PDTYELKKKHHQFKTVLCGRCR-LLSHGHMITAVGGNGGYAGGKQFVSADELREKL 175
PDT + Q +C RC LL H ++A+ + ++ G + ++
Sbjct: 130 PKPHPDTVSQYLEKSQSPVQVCDRCHDLLHHNKGVSAISPSI-HSIGAYLDESPHKHNRI 188
Query: 176 SHLRREKALIVKLVD-IVDFNGSFLARIRDLAGAN----------PIILVVTKVDLLPKG 224
H+ + LVD I + G R R+ A I V+T+ DLL
Sbjct: 189 YHIIDAADFPMSLVDGIYEELGIQEQRSRNRRSATYKYKHGKKLPTITFVITRSDLLGPT 248
Query: 225 TDFNCVGDWVVEATTKKKLNVLS-------VHLTSSKSLAGIVGVASEIQKEKKGRDVYI 277
+ V + ++KL + S VH+ S+ V E+++ G ++I
Sbjct: 249 KELVDSKMEFVRSVLREKLGISSEEFRLGNVHMISAHRGWWTKKVKEEMREHGGG--IWI 306
Query: 278 LGSANVGKSAFINA--------------LLKKMGERDPAAAMAQK--------------- 308
+G AN GKS+F+ A L+ + GE PA ++ +
Sbjct: 307 VGKANAGKSSFVQACIPKDSRNLEKMAELIARRGEASPAPSLDDQPAFDPDSLLPPAPNE 366
Query: 309 ----YRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPGV 341
PI S++PGTT+ PI+I G G++ D PG+
Sbjct: 367 DLYPVLPIVSSLPGTTVSPIRIPFGRGKGEIIDLPGL 403
>gi|269123217|ref|YP_003305794.1| GTP-binding protein HSR1-like protein [Streptobacillus moniliformis
DSM 12112]
gi|268314543|gb|ACZ00917.1| GTP-binding protein HSR1-related protein [Streptobacillus
moniliformis DSM 12112]
Length = 391
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 101/446 (22%), Positives = 173/446 (38%), Gaps = 97/446 (21%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRC-RLLSHGHMITAVGGNGGY 159
C GCG LQ+++ GYV + K ++C RC RL +G + Y
Sbjct: 5 CKGCGLLLQSNDPKIDGYVPHE------KLISNDKIICKRCFRLKHYGENLEKEEDKLSY 58
Query: 160 AGGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVD 219
E+++ + +E +I+ + DI+DF SF I DL I+ V+ K+D
Sbjct: 59 QI--------EVKKAI----KEADIIIPIFDIIDFESSFTTEIIDLLEDKTILAVINKID 106
Query: 220 LLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQK-----EKKGRD 274
LLP V WV ++ + V S+K+ G+ G+ +IQ KK D
Sbjct: 107 LLPGYIHIAEVSKWVKYYFSENNVYPEDVAFISAKNRYGVNGIFRKIQYIAKNILKKSLD 166
Query: 275 ----VYILGSANVGKSAFINALLKK-MGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAF 329
+ ++G +NVGKS IN LL+K + + +K + L I
Sbjct: 167 SNVKIAVIGVSNVGKSNLINLLLEKNISTVSKFSGTTKKMLVNKKKTKEYMLTII----- 221
Query: 330 LGGGKLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNG 389
DTPG+ R + +++++ L P + +++ + E + F L
Sbjct: 222 -------DTPGLIPEGRLSDLLNSDISYKLVPSGEISRKTYR-LKEKQV---FMFENLAY 270
Query: 390 FTIFWGGLVRIDLLKVLPET----CLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPI 445
F + K +P+ ++ Y + ++ ++ +KA E
Sbjct: 271 FEV-----------KNIPDNKSSAIISAYASREVKFHITNMEKAKEL------------- 306
Query: 446 GKQKAEGWKGLDRERLLE------IKFEDTERPASDVAISGLGWISVEPVRRSIRNSDIN 499
K +K LD E + IK + D I+GLG+I V+
Sbjct: 307 --SKNGFFKFLDEENYNKYFSNDFIKQDYIIEENEDFVIAGLGYIEVK------------ 352
Query: 500 LESTSGELHLAVHVPKPVEVFVRNPM 525
G L ++ + PK V+ VR +
Sbjct: 353 ----RGPLEISAYYPKDVKALVRKSI 374
>gi|302565204|ref|NP_001180617.1| nitric oxide-associated protein 1 [Macaca mulatta]
Length = 631
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 78/193 (40%), Gaps = 29/193 (15%)
Query: 335 LYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFW 394
YDTPG+ + ++ +++ + P + ++F + G +F
Sbjct: 427 FYDTPGITKENCILNLLTEKEVNIVLPTQSIVPRTFVLKP--------------GMVLFL 472
Query: 395 GGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTL--TPPIGKQKAEG 452
G + RID L+ T +L V++ D+AD YQK G TL P GK++ G
Sbjct: 473 GAIGRIDFLQGNQSAWFTVVASNTLPVHITSLDRADTLYQKHAGHTLLQVPMGGKERMAG 532
Query: 453 WKGLDRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVH 512
+ L E ++ +D+ S GW+SV P + LHL +
Sbjct: 533 FPPLVAEDIMLKGGRGGSEAVADIKFSSAGWVSVTP-------------NVKDRLHLRGY 579
Query: 513 VPKPVEVFVRNPM 525
P+ + VR P+
Sbjct: 580 TPEGTVLTVRPPL 592
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 108/261 (41%), Gaps = 54/261 (20%)
Query: 100 SCYGCGAPLQTSESDAPGYVDPDTY-ELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGG 158
+C GCGA L + PGY+ D + + + +C RC LL H +
Sbjct: 73 NCSGCGAELHCQDPGVPGYLPCDKFLRMAEADGGLARTVCQRCWLLVHHRRALRLQ---- 128
Query: 159 YAGGKQFVSADELREKLSH-LRRE-KALIVKLVDIVDFNGSFLARIRDLAGANPIILVVT 216
VS ++ E +S LRR +L++ +VD++D + L + L G +I++
Sbjct: 129 -------VSREQYLELVSAALRRPGPSLVLYMVDLLDLPDALLPDLPALVGPKQLIVLGN 181
Query: 217 KVDLLPKGTDF-----------NCVGDWVVEATTKK----------------------KL 243
KVDLLP+ +C ++ A + +
Sbjct: 182 KVDLLPQDAPGYRQRLRERLWDDCARAGLLLAPGHQGPQIPVKNEPQDGENSNPPNWSRT 241
Query: 244 NVLSVHLTSSKSLAGIVGVASEIQKEKKGR-DVYILGSANVGKSAFINALLKKMGERDPA 302
V V L S+K+ G+ + S +Q+ + R DVY++G+ N GKS N LL E D
Sbjct: 242 VVRDVRLISAKTGYGVEELISALQRSWRYRGDVYLVGATNAGKSTLFNTLL----ESDYC 297
Query: 303 AAMAQKY--RPIQSAVPGTTL 321
A + R S PGTTL
Sbjct: 298 TAKGSEAIDRATISPWPGTTL 318
>gi|109074713|ref|XP_001082521.1| PREDICTED: uncharacterized protein C4orf14 isoform 4 [Macaca
mulatta]
gi|355687403|gb|EHH25987.1| hypothetical protein EGK_15861 [Macaca mulatta]
Length = 698
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 78/193 (40%), Gaps = 29/193 (15%)
Query: 335 LYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFW 394
YDTPG+ + ++ +++ + P + ++F + G +F
Sbjct: 494 FYDTPGITKENCILNLLTEKEVNIVLPTQSIVPRTFVLKP--------------GMVLFL 539
Query: 395 GGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTL--TPPIGKQKAEG 452
G + RID L+ T +L V++ D+AD YQK G TL P GK++ G
Sbjct: 540 GAIGRIDFLQGNQSAWFTVVASNTLPVHITSLDRADTLYQKHAGHTLLQVPMGGKERMAG 599
Query: 453 WKGLDRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVH 512
+ L E ++ +D+ S GW+SV P + LHL +
Sbjct: 600 FPPLVAEDIMLKGGRGGSEAVADIKFSSAGWVSVTP-------------NVKDRLHLRGY 646
Query: 513 VPKPVEVFVRNPM 525
P+ + VR P+
Sbjct: 647 TPEGTVLTVRPPL 659
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 108/261 (41%), Gaps = 54/261 (20%)
Query: 100 SCYGCGAPLQTSESDAPGYVDPDTY-ELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGG 158
+C GCGA L + PGY+ D + + + +C RC LL H +
Sbjct: 140 NCSGCGAELHCQDPGVPGYLPCDKFLRMAEADGGLARTVCQRCWLLVHHRRALRLQ---- 195
Query: 159 YAGGKQFVSADELREKLSH-LRRE-KALIVKLVDIVDFNGSFLARIRDLAGANPIILVVT 216
VS ++ E +S LRR +L++ +VD++D + L + L G +I++
Sbjct: 196 -------VSREQYLELVSAALRRPGPSLVLYMVDLLDLPDALLPDLPALVGPKQLIVLGN 248
Query: 217 KVDLLPKGTDF-----------NCVGDWVVEATTKK----------------------KL 243
KVDLLP+ +C ++ A + +
Sbjct: 249 KVDLLPQDAPGYRQRLRERLWDDCARAGLLLAPGHQGPQIPVKNEPQDGENSNPPNWSRT 308
Query: 244 NVLSVHLTSSKSLAGIVGVASEIQKEKKGR-DVYILGSANVGKSAFINALLKKMGERDPA 302
V V L S+K+ G+ + S +Q+ + R DVY++G+ N GKS N LL E D
Sbjct: 309 VVRDVRLISAKTGYGVEELISALQRSWRYRGDVYLVGATNAGKSTLFNTLL----ESDYC 364
Query: 303 AAMAQKY--RPIQSAVPGTTL 321
A + R S PGTTL
Sbjct: 365 TAKGSEAIDRATISPWPGTTL 385
>gi|401770836|ref|YP_006585836.1| GTPase [Mycoplasma gallisepticum CA06_2006.052-5-2P]
gi|400277082|gb|AFP80539.1| putative GTPase [Mycoplasma gallisepticum CA06_2006.052-5-2P]
Length = 365
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 86/377 (22%), Positives = 138/377 (36%), Gaps = 71/377 (18%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG L T +D +D + +E LC RC H I
Sbjct: 5 CVGCGNYLSTDPNDLGYCLDINMFE-----------LCKRCFQFKHYKKI---------- 43
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
K V ++ L+ L + + LVD +F L I+ AN L+ K+D
Sbjct: 44 DQKLTVKKADIENYLNSLVLDNYCVFYLVDPTNFIFD-LEMIKRSMNANQFYLIFNKIDY 102
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQK---------EKK 271
L K + + + +V+ +N + ++ L + + +++K EK+
Sbjct: 103 LAKKNNLSVIKSRLVDNFKDHGIN-----FSPNQILFNSIYLTYDLRKIDRLMKKAYEKR 157
Query: 272 GRDVYILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLG 331
+ ++ LG +NVGKS+ IN LL K+ D A+ S TTL QI
Sbjct: 158 KKAIF-LGQSNVGKSSLINKLL-KLNNIDKKLALT------TSPYLNTTLQINQIKR--R 207
Query: 332 GGKLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFA----VISETETNNEFKSHGL 387
L DTPG + L P+ R S+ V + +N F
Sbjct: 208 DFCLLDTPG--------YLDETNGFFDLVPRRIKRLVSYQWKNPVTYQITSNQIFYCEDF 259
Query: 388 NGFTIFWGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGK 447
++ L K +T +TFY P +L+++ + QK LT
Sbjct: 260 FKLKVY--------LKKDTTKTSITFYCPTTLRIHRTSSKNEQSIDQK-----LTQIFSD 306
Query: 448 QKAEGWKGLDRERLLEI 464
KA + D+ +I
Sbjct: 307 LKAFSYLNNDQTNTYQI 323
>gi|354498862|ref|XP_003511531.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein C4orf14
homolog [Cricetulus griseus]
Length = 691
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 107/261 (40%), Gaps = 55/261 (21%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYE-LKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGY 159
C GCGA L PGY+ + + + + C RC LL H +
Sbjct: 139 CSGCGAELHCQHPSLPGYLTEEKFRGVTQADGGRARTXCQRCWLLVHHRRALRLR----- 193
Query: 160 AGGKQFVSADELREKLSH-LRR-EKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTK 217
VS ++ E +S LRR E AL++ +VD++D + L + L G + ++ K
Sbjct: 194 ------VSREQYLELVSAALRRPEPALVLYMVDLLDLPDALLPDLPKLVGPKQVFVLGNK 247
Query: 218 VDLLPKGTDF-----------NCVGDWVVEA-----------------------TTKKKL 243
VDLLP+ +C+ +V A +T+
Sbjct: 248 VDLLPQDAPGYLQRLRKRLWDDCIRAGLVMAPGHRGPQYPTGDDPRDEKKNPNPSTRSST 307
Query: 244 NVLSVHLTSSKSLAGIVGVASEIQKEKKGR-DVYILGSANVGKSAFINALLKKMGERDPA 302
+ V L S+K+ G+ + S +Q+ + R DVY++G+ N GKS N LL E D
Sbjct: 308 VIKDVRLISAKTGYGVEELISALQRSWRYRGDVYLVGTTNAGKSTLFNTLL----ESDYC 363
Query: 303 AAMAQKY--RPIQSAVPGTTL 321
A + R S PGTTL
Sbjct: 364 TAKGSEAIDRATISPWPGTTL 384
Score = 45.1 bits (105), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 77/193 (39%), Gaps = 30/193 (15%)
Query: 335 LYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFW 394
YDTPG+ + ++ +++ + P + ++F + +F
Sbjct: 493 FYDTPGITKENCILNLLTEKEVDIVLPTHSIVPRTFVLKPR--------------MVLFL 538
Query: 395 GGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTL--TPPIGKQKAEG 452
G + RID L+ T L V++ DKAD Y+K G L P GK++
Sbjct: 539 GAIARIDFLEGDQSAWFTVVASNFLPVHITSLDKADALYEKHAGHELLQVPMGGKERMAE 598
Query: 453 WKGLDRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVH 512
+ L E + D+E +D+ S GW++V P + G LHL +
Sbjct: 599 FPPLVAEDITLKGGGDSEA-VADIKFSSAGWVAVTPY-------------SKGTLHLRGY 644
Query: 513 VPKPVEVFVRNPM 525
P+ + V+ P+
Sbjct: 645 TPEGTVLTVQPPV 657
>gi|67526495|ref|XP_661309.1| hypothetical protein AN3705.2 [Aspergillus nidulans FGSC A4]
gi|40740723|gb|EAA59913.1| hypothetical protein AN3705.2 [Aspergillus nidulans FGSC A4]
Length = 990
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 76/337 (22%), Positives = 122/337 (36%), Gaps = 99/337 (29%)
Query: 101 CYGCGAPLQTSESDAPGYVD---------------------------------------- 120
C GCGA QT E + PG+
Sbjct: 426 CPGCGAYSQTVEPNEPGFYSKTRKQTRKLLLEAQKEPLKESATQEAVFTVQKAVEEAEIA 485
Query: 121 ----PDTYELKKKHHQFKTVLCGRCR-LLSHGHMITAVGGNGGYAGGKQFVSADELREKL 175
PDT + Q +C RC LL H ++A+ + ++ G + ++
Sbjct: 486 PKPHPDTVSQYLEKSQSPVQVCDRCHDLLHHNKGVSAISPSI-HSIGAYLDESPHKHNRI 544
Query: 176 SHLRREKALIVKLVD-IVDFNGSFLARIRDLAGAN----------PIILVVTKVDLLPKG 224
H+ + LVD I + G R R+ A I V+T+ DLL
Sbjct: 545 YHIIDAADFPMSLVDGIYEELGIQEQRSRNRRSATYKYKHGKKLPTITFVITRSDLLGPT 604
Query: 225 TDFNCVGDWVVEATTKKKLNVLS-------VHLTSSKSLAGIVGVASEIQKEKKGRDVYI 277
+ V + ++KL + S VH+ S+ V E+++ G ++I
Sbjct: 605 KELVDSKMEFVRSVLREKLGISSEEFRLGNVHMISAHRGWWTKKVKEEMREHGGG--IWI 662
Query: 278 LGSANVGKSAFINA--------------LLKKMGERDPAAAMAQK--------------- 308
+G AN GKS+F+ A L+ + GE PA ++ +
Sbjct: 663 VGKANAGKSSFVQACIPKDSRNLEKMAELIARRGEASPAPSLDDQPAFDPDSLLPPAPNE 722
Query: 309 ----YRPIQSAVPGTTLGPIQIDAFLGGGKLYDTPGV 341
PI S++PGTT+ PI+I G G++ D PG+
Sbjct: 723 DLYPVLPIVSSLPGTTVSPIRIPFGRGKGEIIDLPGL 759
>gi|401766293|ref|YP_006581299.1| GTPase [Mycoplasma gallisepticum VA94_7994-1-7P]
gi|401767049|ref|YP_006582054.1| GTPase [Mycoplasma gallisepticum NC95_13295-2-2P]
gi|401767817|ref|YP_006582821.1| GTPase [Mycoplasma gallisepticum NC96_1596-4-2P]
gi|401768578|ref|YP_006583581.1| GTPase [Mycoplasma gallisepticum NY01_2001.047-5-1P]
gi|401769330|ref|YP_006584332.1| GTPase [Mycoplasma gallisepticum WI01_2001.043-13-2P]
gi|401770079|ref|YP_006585080.1| GTPase [Mycoplasma gallisepticum NC06_2006.080-5-2P]
gi|401771586|ref|YP_006586585.1| GTPase [Mycoplasma gallisepticum NC08_2008.031-4-3P]
gi|400272534|gb|AFP75997.1| putative GTPase [Mycoplasma gallisepticum VA94_7994-1-7P]
gi|400273302|gb|AFP76764.1| putative GTPase [Mycoplasma gallisepticum NC95_13295-2-2P]
gi|400274057|gb|AFP77518.1| putative GTPase [Mycoplasma gallisepticum NC96_1596-4-2P]
gi|400274829|gb|AFP78289.1| putative GTPase [Mycoplasma gallisepticum NY01_2001.047-5-1P]
gi|400275590|gb|AFP79049.1| putative GTPase [Mycoplasma gallisepticum WI01_2001.043-13-2P]
gi|400276337|gb|AFP79795.1| putative GTPase [Mycoplasma gallisepticum NC06_2006.080-5-2P]
gi|400277846|gb|AFP81302.1| putative GTPase [Mycoplasma gallisepticum NC08_2008.031-4-3P]
Length = 365
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 86/377 (22%), Positives = 138/377 (36%), Gaps = 71/377 (18%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG L T +D +D + +E LC RC H I
Sbjct: 5 CVGCGNYLSTDPNDLGYCLDINMFE-----------LCKRCFQFKHYKKI---------- 43
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
K V ++ L+ L + + LVD +F L I+ AN L+ K+D
Sbjct: 44 DQKLTVKKADIENYLNSLVLDNYCVFYLVDPTNFIFD-LEMIKRSMNANQFYLIFNKIDY 102
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQK---------EKK 271
L K + + + +V+ +N + ++ L + + +++K EK+
Sbjct: 103 LAKKNNLSVIKSRLVDNFKDHGIN-----FSPNQILFNSIYLTYDLRKIDRLMKKAYEKR 157
Query: 272 GRDVYILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLG 331
+ ++ LG +NVGKS+ IN LL K+ D A+ S TTL QI
Sbjct: 158 KKAIF-LGQSNVGKSSLINKLL-KLNNIDKKLALT------TSPYLNTTLQINQIKR--R 207
Query: 332 GGKLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFA----VISETETNNEFKSHGL 387
L DTPG + L P+ R S+ V + +N F
Sbjct: 208 DFCLLDTPG--------YLDETNGFFDLVPRRIKRLVSYQWKNPVTYQITSNQIFYCEDF 259
Query: 388 NGFTIFWGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGK 447
++ L K +T +TFY P +L+++ + QK LT
Sbjct: 260 FKLKVY--------LKKDTTKTSITFYCPTALRIHRTSSKNEQSIDQK-----LTQIFSD 306
Query: 448 QKAEGWKGLDRERLLEI 464
KA + D+ +I
Sbjct: 307 LKAFSYLNNDQTNTYQI 323
>gi|395851373|ref|XP_003798235.1| PREDICTED: nitric oxide-associated protein 1 [Otolemur garnettii]
Length = 688
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 78/193 (40%), Gaps = 29/193 (15%)
Query: 335 LYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFW 394
YDTPG+ + ++ E++ + P + ++F + G +F
Sbjct: 488 FYDTPGITKENCILNLLTEEEVKIVLPTHSIVPRTFVLKP--------------GMVLFL 533
Query: 395 GGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTL--TPPIGKQKAEG 452
G L RID L+ T L V++ DKAD Y+K+ G TL P GK++ G
Sbjct: 534 GALGRIDFLQGNQSAWFTVVASNLLPVHITSLDKADGVYEKQAGHTLLQVPMGGKERMAG 593
Query: 453 WKGLDRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVH 512
+ L E ++ + +D+ S GW++V P LHL +
Sbjct: 594 FPSLVAEDIMLQEGLGESEAVADIKFSSAGWVAVTP-------------QMKDRLHLRGY 640
Query: 513 VPKPVEVFVRNPM 525
P+ + VR P+
Sbjct: 641 TPRGTVLTVRPPL 653
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 105/259 (40%), Gaps = 51/259 (19%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTY-ELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGY 159
C GCGA L + PGY+ + + + +C RC LL H +
Sbjct: 134 CSGCGAELHCQDPGVPGYLPSEKFLRAVQAAGGLARTVCQRCWLLVHHQRALRLQ----- 188
Query: 160 AGGKQFVSADELREKLSHL--RREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTK 217
VS ++ E +S R AL++ +VD++D + L + L G +I++ K
Sbjct: 189 ------VSREQYLELVSTALQRPGPALVLYMVDLLDLPDALLPDLPALVGPKQLIVLGNK 242
Query: 218 VDLLPKGTD-----------FNCVGDWVVEA-----------------------TTKKKL 243
+DLLP+ +C ++ A + + +
Sbjct: 243 LDLLPQDAPGYRQRLRERLWNDCARAGLLLAPGHGGPQLPSRDGPQDREENSNRSDRSRT 302
Query: 244 NVLSVHLTSSKSLAGIVGVASEIQKEKKGR-DVYILGSANVGKSAFINALLKKMGERDPA 302
V V L S+K+ GI + S +Q+ + R DVY++G+ N GKS N LLK + A
Sbjct: 303 VVRDVRLISAKTGYGIEELISALQRSWRYRGDVYLVGATNAGKSTLFNTLLK--SDYCTA 360
Query: 303 AAMAQKYRPIQSAVPGTTL 321
R S+ PGTTL
Sbjct: 361 KGAEAIDRATISSWPGTTL 379
>gi|385326252|ref|YP_005880689.1| putative GTPase [Mycoplasma gallisepticum str. F]
gi|284931408|gb|ADC31346.1| putative GTPase [Mycoplasma gallisepticum str. F]
Length = 365
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 86/377 (22%), Positives = 138/377 (36%), Gaps = 71/377 (18%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGYA 160
C GCG L T +D +D + +E LC RC H I
Sbjct: 5 CVGCGNYLSTDPNDLGYCLDINMFE-----------LCKRCFQFKHYKKI---------- 43
Query: 161 GGKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKVDL 220
K V ++ L+ L + + LVD +F L I+ AN L+ K+D
Sbjct: 44 DQKLTVKKADIENYLNSLILDNYCVFYLVDPTNFIFD-LEMIKRSMNANQFYLIFNKIDY 102
Query: 221 LPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQK---------EKK 271
L K + + + +V+ +N + ++ L + + +++K EK+
Sbjct: 103 LAKKNNLSVIKSRLVDNFKDHGIN-----FSPNQILFNSIYLTYDLRKIDRLMKKAYEKR 157
Query: 272 GRDVYILGSANVGKSAFINALLKKMGERDPAAAMAQKYRPIQSAVPGTTLGPIQIDAFLG 331
+ ++ LG +NVGKS+ IN LL K+ D A+ S TTL QI
Sbjct: 158 KKAIF-LGQSNVGKSSLINKLL-KLNNIDKKLALT------TSPYLNTTLQINQIKR--R 207
Query: 332 GGKLYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFA----VISETETNNEFKSHGL 387
L DTPG + L P+ R S+ V + +N F
Sbjct: 208 DFCLLDTPG--------YLDETNGFFDLVPRRIKRLVSYQWKNPVTYQITSNQIFYCEDF 259
Query: 388 NGFTIFWGGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTLTPPIGK 447
++ L K +T +TFY P +L+++ + QK LT
Sbjct: 260 FKLKVY--------LKKDTTKTSITFYCPTALRIHRTSSKNEQSIDQK-----LTQIFSD 306
Query: 448 QKAEGWKGLDRERLLEI 464
KA + D+ +I
Sbjct: 307 LKAFSYLNNDQTNTYQI 323
>gi|426344419|ref|XP_004038767.1| PREDICTED: nitric oxide-associated protein 1 [Gorilla gorilla
gorilla]
Length = 346
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 78/193 (40%), Gaps = 29/193 (15%)
Query: 335 LYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFW 394
YDTPG+ + ++ +++ + P + ++F + G +F
Sbjct: 142 FYDTPGITKENCILNLLTEKEVNIVLPTQSIVPRTFVLKP--------------GMVLFL 187
Query: 395 GGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELGVTL--TPPIGKQKAEG 452
G + RID L+ T L V++ D+AD YQK G TL P GK++ G
Sbjct: 188 GAIGRIDFLQGNQSAWFTVVASNILPVHITSLDRADALYQKHAGHTLLQIPMGGKERMAG 247
Query: 453 WKGLDRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVH 512
+ L E ++ + +D+ S GW+SV P + LHL +
Sbjct: 248 FPPLVAEDIMLKEGLGASEAVADIKFSSAGWVSVTP-------------NFKDRLHLRGY 294
Query: 513 VPKPVEVFVRNPM 525
P+ + VR P+
Sbjct: 295 TPEGTVLTVRPPL 307
>gi|149035169|gb|EDL89873.1| MMR_HSR1 domain containing protein RGD1359460, isoform CRA_a
[Rattus norvegicus]
Length = 694
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 106/261 (40%), Gaps = 55/261 (21%)
Query: 101 CYGCGAPLQTSESDAPGYVDPDTY-ELKKKHHQFKTVLCGRCRLLSHGHMITAVGGNGGY 159
C GCGA L PGY+ + + + + +C RC LL H +
Sbjct: 142 CSGCGAELHCQHPGLPGYLPGEKFRDAAQAEGGLARTVCQRCWLLVHHRRALRLQ----- 196
Query: 160 AGGKQFVSADELREKLSHL--RREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTK 217
VS D+ E +S R AL++ +VD++D + L + L G + ++ K
Sbjct: 197 ------VSRDQYLELVSTALQRPGPALVLYMVDLLDLPDALLPDLPKLVGPKQLFVLGNK 250
Query: 218 VDLLPKGTD-----------FNCVGDWVVEA-----------------------TTKKKL 243
VDLLP+ +C+ +V A +++ +
Sbjct: 251 VDLLPQDAPGYLQRLRKRLWNDCIRAGLVVAPGHRGPQYPTGNEPLDEIKNQNPSSRSRT 310
Query: 244 NVLSVHLTSSKSLAGIVGVASEIQKEKKGR-DVYILGSANVGKSAFINALLKKMGERDPA 302
V V L S+K+ G+ + S +Q+ + R DVY++G+ N GKS N LL E D
Sbjct: 311 VVKDVRLISAKTGYGVEELISALQRSWRYRGDVYLVGTTNAGKSTLFNTLL----ESDYC 366
Query: 303 AAMAQKY--RPIQSAVPGTTL 321
A + R S PGTTL
Sbjct: 367 TAKGSEAIDRATISPWPGTTL 387
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 78/193 (40%), Gaps = 30/193 (15%)
Query: 335 LYDTPGVHLHHRQAAVVHAEDLPALAPQSRLRGQSFAVISETETNNEFKSHGLNGFTIFW 394
YDTPG+ + ++ +++ + P + ++F + G +F
Sbjct: 496 FYDTPGITKENCILNLLTEKEIDIVLPTHSIIPRTFVLKP--------------GMVLFL 541
Query: 395 GGLVRIDLLKVLPETCLTFYGPKSLQVYMVPTDKADEFYQKELG--VTLTPPIGKQKAEG 452
GG+ R+D L+ T L V++ DKAD Y+K G + L P GK++
Sbjct: 542 GGIARVDFLQGNQSAWFTVVASNFLPVHISSLDKADALYEKHAGQELLLVPMGGKERMAQ 601
Query: 453 WKGLDRERLLEIKFEDTERPASDVAISGLGWISVEPVRRSIRNSDINLESTSGELHLAVH 512
+ L E + +K +D+ S GW++V P + G LHL +
Sbjct: 602 FPPLVAED-ITLKGGGEAEAVADIKFSSAGWVAVTPY-------------SEGTLHLRAY 647
Query: 513 VPKPVEVFVRNPM 525
P+ + V P+
Sbjct: 648 TPEGTALTVHPPV 660
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.135 0.396
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,916,920,099
Number of Sequences: 23463169
Number of extensions: 384550067
Number of successful extensions: 1300191
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 802
Number of HSP's successfully gapped in prelim test: 898
Number of HSP's that attempted gapping in prelim test: 1294420
Number of HSP's gapped (non-prelim): 2437
length of query: 553
length of database: 8,064,228,071
effective HSP length: 148
effective length of query: 405
effective length of database: 8,886,646,355
effective search space: 3599091773775
effective search space used: 3599091773775
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 80 (35.4 bits)