Query 008811
Match_columns 552
No_of_seqs 253 out of 1625
Neff 4.9
Searched_HMMs 29240
Date Mon Mar 25 12:15:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008811.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/008811hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3iwl_A Copper transport protei 99.2 4.2E-11 1.4E-15 94.3 8.6 66 10-76 2-67 (68)
2 1cc8_A Protein (metallochapero 99.1 2.1E-10 7E-15 90.9 9.2 67 9-75 4-71 (73)
3 3dxs_X Copper-transporting ATP 99.1 1.8E-10 6.2E-15 91.1 8.8 68 9-76 1-72 (74)
4 4a4j_A Pacszia, cation-transpo 99.1 3.8E-10 1.3E-14 87.8 10.1 65 10-74 2-69 (69)
5 3fry_A Probable copper-exporti 99.0 7.7E-10 2.6E-14 88.0 8.9 66 9-76 4-70 (73)
6 2crl_A Copper chaperone for su 99.0 7E-10 2.4E-14 94.5 9.0 72 8-79 17-88 (98)
7 2xmw_A PACS-N, cation-transpor 98.9 7.3E-09 2.5E-13 79.2 10.0 65 10-74 3-70 (71)
8 1mwy_A ZNTA; open-faced beta-s 98.9 1E-08 3.6E-13 79.9 10.2 68 9-76 2-71 (73)
9 2l3m_A Copper-ION-binding prot 98.9 9.6E-09 3.3E-13 78.9 9.5 63 9-71 4-70 (71)
10 2xmm_A SSR2857 protein, ATX1; 98.9 3.2E-09 1.1E-13 79.6 6.6 61 11-71 2-63 (64)
11 1osd_A MERP, hypothetical prot 98.9 8.2E-09 2.8E-13 79.3 9.0 65 10-74 3-71 (72)
12 1aw0_A Menkes copper-transport 98.9 8.8E-09 3E-13 79.1 9.1 65 10-74 3-71 (72)
13 1y3j_A Copper-transporting ATP 98.9 5.1E-09 1.7E-13 82.5 7.8 69 9-77 2-74 (77)
14 2g9o_A Copper-transporting ATP 98.9 8.9E-09 3E-13 85.3 9.4 70 10-79 3-79 (90)
15 2roe_A Heavy metal binding pro 98.9 3.9E-09 1.3E-13 80.9 6.5 62 13-74 3-65 (66)
16 2qif_A Copper chaperone COPZ; 98.8 1.6E-08 5.3E-13 75.9 9.4 62 10-71 2-67 (69)
17 3cjk_B Copper-transporting ATP 98.8 1.8E-08 6.1E-13 78.6 9.9 65 11-75 3-71 (75)
18 1opz_A Potential copper-transp 98.8 1.3E-08 4.5E-13 78.5 9.1 66 9-74 5-74 (76)
19 1kvi_A Copper-transporting ATP 98.8 8.4E-09 2.9E-13 81.5 7.8 68 9-76 7-78 (79)
20 1q8l_A Copper-transporting ATP 98.8 1.1E-08 3.8E-13 82.7 8.4 69 9-77 8-80 (84)
21 1fvq_A Copper-transporting ATP 98.8 1.4E-08 4.7E-13 78.0 8.5 65 11-75 3-70 (72)
22 1yjr_A Copper-transporting ATP 98.8 1.5E-08 5E-13 78.5 8.3 66 10-75 4-73 (75)
23 2kt2_A Mercuric reductase; nme 98.8 1.2E-08 4.3E-13 78.0 7.7 63 13-75 3-68 (69)
24 1jww_A Potential copper-transp 98.8 1.9E-08 6.5E-13 79.0 8.7 68 10-77 3-74 (80)
25 2k2p_A Uncharacterized protein 98.8 8.2E-09 2.8E-13 85.5 6.8 63 9-71 21-84 (85)
26 1cpz_A Protein (COPZ); copper 98.8 1.8E-08 6E-13 76.4 8.1 62 13-74 3-68 (68)
27 2kkh_A Putative heavy metal tr 98.8 3E-08 1E-12 82.3 10.1 74 8-81 14-91 (95)
28 1yg0_A COP associated protein; 98.7 2.6E-08 8.8E-13 75.0 7.4 61 11-71 2-65 (66)
29 2ldi_A Zinc-transporting ATPas 98.7 2E-08 6.9E-13 76.1 6.8 64 9-72 2-69 (71)
30 2kyz_A Heavy metal binding pro 98.7 2.4E-08 8.2E-13 76.9 6.1 62 11-74 2-64 (67)
31 2ofg_X Zinc-transporting ATPas 98.7 6E-08 2.1E-12 83.7 9.3 66 9-74 7-76 (111)
32 1qup_A Superoxide dismutase 1 98.7 5.7E-08 1.9E-12 95.2 9.8 71 10-80 6-76 (222)
33 1p6t_A Potential copper-transp 98.7 5.7E-08 1.9E-12 86.0 8.5 69 10-78 74-146 (151)
34 2ew9_A Copper-transporting ATP 98.6 7.5E-08 2.6E-12 84.7 9.0 65 10-74 80-148 (149)
35 2rop_A Copper-transporting ATP 98.5 2.1E-07 7.2E-12 87.6 9.2 69 10-78 122-194 (202)
36 1jk9_B CCS, copper chaperone f 98.5 1.6E-07 5.6E-12 93.6 8.1 70 10-79 7-76 (249)
37 2aj0_A Probable cadmium-transp 98.5 2.3E-07 7.8E-12 72.0 6.8 60 10-73 3-63 (71)
38 2ew9_A Copper-transporting ATP 98.4 4.9E-07 1.7E-11 79.4 8.5 67 9-75 3-73 (149)
39 2rop_A Copper-transporting ATP 98.1 6.6E-06 2.3E-10 77.3 7.6 65 9-73 19-90 (202)
40 1p6t_A Potential copper-transp 98.1 1.2E-05 4E-10 71.0 8.7 63 9-71 5-71 (151)
41 3j09_A COPA, copper-exporting 98.0 1.4E-05 4.7E-10 90.2 9.5 65 11-75 3-71 (723)
42 3cq1_A Putative uncharacterize 71.5 3.7 0.00013 34.8 4.1 36 11-46 42-83 (103)
43 3bpd_A Uncharacterized protein 70.1 15 0.00052 31.7 7.6 63 9-72 6-77 (100)
44 2raq_A Conserved protein MTH88 69.4 20 0.00067 30.9 8.1 63 9-72 6-77 (97)
45 1uwd_A Hypothetical protein TM 67.2 5 0.00017 33.9 4.0 36 11-46 43-84 (103)
46 2x3d_A SSO6206; unknown functi 66.5 24 0.00084 30.3 8.1 63 9-72 4-76 (96)
47 3lno_A Putative uncharacterize 56.4 7.2 0.00025 33.4 3.1 37 11-47 45-88 (108)
48 2jsx_A Protein NAPD; TAT, proo 55.5 31 0.0011 29.2 6.9 47 21-67 16-63 (95)
49 4gwb_A Peptide methionine sulf 53.9 23 0.00077 33.3 6.3 28 21-48 9-36 (168)
50 2lqo_A Putative glutaredoxin R 52.0 43 0.0015 27.7 7.2 31 12-44 6-36 (92)
51 2nyt_A Probable C->U-editing e 51.3 22 0.00075 33.8 5.9 62 11-75 84-146 (190)
52 3lvj_C Sulfurtransferase TUSA; 51.3 32 0.0011 27.9 6.1 56 11-75 10-68 (82)
53 1owx_A Lupus LA protein, SS-B, 47.0 34 0.0012 30.2 6.0 56 12-67 19-76 (121)
54 1ff3_A Peptide methionine sulf 44.6 32 0.0011 33.4 5.9 28 21-48 49-76 (211)
55 1nwa_A Peptide methionine sulf 41.4 42 0.0014 32.5 6.1 28 21-48 32-59 (203)
56 1ayz_A UBC2, ubiquitin-conjuga 41.2 6.1 0.00021 36.7 0.2 10 88-97 104-113 (169)
57 1fvg_A Peptide methionine sulf 40.9 40 0.0014 32.4 5.9 28 21-48 50-77 (199)
58 2byk_A Chrac-16; nucleosome sl 40.0 6 0.00021 36.1 0.0 11 25-35 23-33 (140)
59 2kmw_A Uncharacterized protein 38.4 27 0.00092 31.8 4.1 17 37-53 25-42 (150)
60 1ayz_A UBC2, ubiquitin-conjuga 37.7 7.3 0.00025 36.2 0.2 11 23-33 5-15 (169)
61 3bqh_A PILB, peptide methionin 36.2 49 0.0017 31.7 5.7 28 21-48 9-36 (193)
62 3tj1_A RNA polymerase I-specif 35.9 7.7 0.00026 43.5 0.0 7 27-33 78-84 (649)
63 1jdq_A TM006 protein, hypothet 32.9 79 0.0027 26.6 5.9 55 12-75 27-84 (98)
64 3v4k_A DNA DC->DU-editing enzy 32.6 1.1E+02 0.0038 29.5 7.5 53 18-74 109-161 (203)
65 2j89_A Methionine sulfoxide re 30.6 70 0.0024 32.0 5.9 28 21-48 101-128 (261)
66 3e0m_A Peptide methionine sulf 29.9 68 0.0023 32.9 5.8 28 21-48 9-36 (313)
67 1qb3_A Cyclin-dependent kinase 28.6 11 0.00038 34.7 -0.2 20 48-67 38-57 (150)
68 3rdw_A Putative arsenate reduc 28.3 58 0.002 28.2 4.4 51 13-71 8-59 (121)
69 1t1v_A SH3BGRL3, SH3 domain-bi 26.9 48 0.0017 26.5 3.4 33 11-44 3-40 (93)
70 2iu1_A EIF5, eukaryotic transl 25.8 19 0.00066 34.7 0.9 29 188-216 153-196 (208)
71 3fz4_A Putative arsenate reduc 24.8 1.1E+02 0.0038 26.3 5.5 51 14-72 7-57 (120)
72 2kmw_A Uncharacterized protein 23.4 67 0.0023 29.1 4.0 7 182-188 102-108 (150)
73 3l4n_A Monothiol glutaredoxin- 23.4 78 0.0027 27.6 4.3 26 8-34 12-37 (127)
74 2qn6_B Translation initiation 23.0 95 0.0032 26.2 4.6 24 11-34 5-30 (93)
75 3gkx_A Putative ARSC family re 23.0 88 0.003 26.9 4.6 51 13-71 7-57 (120)
76 2f06_A Conserved hypothetical 21.5 3.2E+02 0.011 23.3 8.0 58 14-71 75-135 (144)
77 1xhj_A Nitrogen fixation prote 21.3 83 0.0028 26.4 3.8 31 11-41 39-77 (88)
78 2ct6_A SH3 domain-binding glut 21.0 91 0.0031 26.0 4.1 33 11-44 9-46 (111)
79 3hz7_A Uncharacterized protein 20.7 1.1E+02 0.0037 25.1 4.4 52 14-75 4-60 (87)
80 1aba_A Glutaredoxin; electron 20.7 2.5E+02 0.0086 21.7 6.5 24 19-44 13-36 (87)
81 1s3c_A Arsenate reductase; ARS 20.3 97 0.0033 27.5 4.3 46 18-71 10-55 (141)
82 3l78_A Regulatory protein SPX; 20.2 1.8E+02 0.0062 24.7 6.0 47 17-71 7-53 (120)
83 1wik_A Thioredoxin-like protei 20.1 74 0.0025 26.2 3.3 32 10-43 15-51 (109)
No 1
>3iwl_A Copper transport protein ATOX1; beta-alpha-beta-BETA-alpha-beta, cisplatin, platinum, chaperone, ION transport, metal-binding, metal transport; HET: TCE; 1.60A {Homo sapiens} SCOP: d.58.17.1 PDB: 1fe4_A* 1fee_A* 1tl4_A 1tl5_A 2k1r_B 1fe0_A* 3iwx_A 3cjk_A
Probab=99.20 E-value=4.2e-11 Score=94.32 Aligned_cols=66 Identities=29% Similarity=0.546 Sum_probs=61.6
Q ss_pred cEEEEEEecccHHHHHHHHHHHhcCCCeeEEEEecCCcEEEEEecCCHHHHHHHHHHcCCceEEcCC
Q 008811 10 QSCVLRVNVDCDGCKQKVKKVLRKIDGVYSTNVDVEQGKVTVTGNVDPAILIKKLEKLGKHAELWGP 76 (552)
Q Consensus 10 qkv~LkV~m~C~gCa~KIekaL~kIeGV~sV~Vdla~~kVtV~g~idpeeII~aI~KaGf~Ael~~~ 76 (552)
.+++|+|.|+|.+|+.+|+++|++++|| +++||+...+++|+..+++++|+++|+++||.+++|+.
T Consensus 2 ~~~~~~vgm~C~~C~~~i~~~l~~~~gV-~v~v~~~~~~~~v~~~~~~~~i~~~i~~~Gy~~~~~~~ 67 (68)
T 3iwl_A 2 PKHEFSVDMTCGGCAEAVSRVLNKLGGV-KYDIDLPNKKVCIESEHSMDTLLATLKKTGKTVSYLGL 67 (68)
T ss_dssp CEEEEEECCCSHHHHHHHHHHHHHHCSE-EEEEETTTTEEEEEESSCHHHHHHHHHTTCSCEEEEEC
T ss_pred ceEEEEECcCcHHHHHHHHHHHHcCCCe-EEEEEcCCCEEEEEecCCHHHHHHHHHHcCCceEecCC
Confidence 4677888789999999999999999999 99999999999999888999999999999999999864
No 2
>1cc8_A Protein (metallochaperone ATX1); copper transport, mercury coordination, metal transport; 1.02A {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1cc7_A 1fd8_A 1fes_A 2ggp_A 3k7r_A
Probab=99.12 E-value=2.1e-10 Score=90.85 Aligned_cols=67 Identities=25% Similarity=0.461 Sum_probs=62.1
Q ss_pred ccEEEEEEecccHHHHHHHHHHHhcCC-CeeEEEEecCCcEEEEEecCCHHHHHHHHHHcCCceEEcC
Q 008811 9 LQSCVLRVNVDCDGCKQKVKKVLRKID-GVYSTNVDVEQGKVTVTGNVDPAILIKKLEKLGKHAELWG 75 (552)
Q Consensus 9 ~qkv~LkV~m~C~gCa~KIekaL~kIe-GV~sV~Vdla~~kVtV~g~idpeeII~aI~KaGf~Ael~~ 75 (552)
+.+++|+|+|+|.+|+.+|+++|.+++ ||.+++||+...+++|+..+++++|+++|+++||.+++|+
T Consensus 4 m~~~~~~v~m~C~~C~~~ie~~l~~~~~GV~~~~v~~~~~~~~v~~~~~~~~i~~~i~~~Gy~~~~~~ 71 (73)
T 1cc8_A 4 IKHYQFNVVMTCSGCSGAVNKVLTKLEPDVSKIDISLEKQLVDVYTTLPYDFILEKIKKTGKEVRSGK 71 (73)
T ss_dssp CEEEEEEECCCSHHHHHHHHHHHHTTTTSEEEEEEETTTTEEEEEESSCHHHHHHHHHTTSSCEEEEE
T ss_pred ceEEEEEEeeECHHHHHHHHHHHHhCCCCceEEEEECCCCEEEEEEeCCHHHHHHHHHHhCCCceeee
Confidence 456788899999999999999999999 9999999999999999977889999999999999998875
No 3
>3dxs_X Copper-transporting ATPase RAN1; CXXC motif, ferredoxin-like fold, ATP- binding, ethylene signaling pathway, hydrolase, ION transport; 1.70A {Arabidopsis thaliana} SCOP: d.58.17.0
Probab=99.12 E-value=1.8e-10 Score=91.06 Aligned_cols=68 Identities=22% Similarity=0.445 Sum_probs=61.6
Q ss_pred ccEEEEEEe-cccHHHHHHHHHHHhcCCCeeEEEEecCCcEEEEE---ecCCHHHHHHHHHHcCCceEEcCC
Q 008811 9 LQSCVLRVN-VDCDGCKQKVKKVLRKIDGVYSTNVDVEQGKVTVT---GNVDPAILIKKLEKLGKHAELWGP 76 (552)
Q Consensus 9 ~qkv~LkV~-m~C~gCa~KIekaL~kIeGV~sV~Vdla~~kVtV~---g~idpeeII~aI~KaGf~Ael~~~ 76 (552)
|.+++|.|. |+|.+|+.+|+++|++++||..++|++...+++|+ ..+++++|+++|+++||.+++++.
T Consensus 1 M~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~ 72 (74)
T 3dxs_X 1 MRKIQVGVTGMTCAACSNSVEAALMNVNGVFKASVALLQNRADVVFDPNLVKEEDIKEEIEDAGFEAEILAE 72 (74)
T ss_dssp CEEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEEGGGTEEEEEECTTTCCHHHHHHHHHHHTCEEEEEEE
T ss_pred CcEEEEEECCcCCHHHHHHHHHHHhcCCCEEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHCCCceEEccC
Confidence 357789999 99999999999999999999999999999999997 236899999999999999988753
No 4
>4a4j_A Pacszia, cation-transporting ATPase PACS; hydrolase, copper homeostasis, zinc homeostasis, ATX1, metal-transporting atpases; 1.25A {Synechocystis} PDB: 4a48_A 2gcf_A 2xmw_A
Probab=99.11 E-value=3.8e-10 Score=87.83 Aligned_cols=65 Identities=29% Similarity=0.605 Sum_probs=60.4
Q ss_pred cEEEEEEe-cccHHHHHHHHHHHhcCCCeeEEEEecCCcEEEEE--ecCCHHHHHHHHHHcCCceEEc
Q 008811 10 QSCVLRVN-VDCDGCKQKVKKVLRKIDGVYSTNVDVEQGKVTVT--GNVDPAILIKKLEKLGKHAELW 74 (552)
Q Consensus 10 qkv~LkV~-m~C~gCa~KIekaL~kIeGV~sV~Vdla~~kVtV~--g~idpeeII~aI~KaGf~Ael~ 74 (552)
++++|.|. |+|..|+.+|+++|.+++||..++|++...+++|+ ..+++++|+++|+++||.++++
T Consensus 2 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~Gy~~~~~ 69 (69)
T 4a4j_A 2 QTINLQLEGMDCTSCASSIERAIAKVPGVQSCQVNFALEQAVVSYHGETTPQILTDAVERAGYHARVL 69 (69)
T ss_dssp EEEEEEEESCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTCCHHHHHHHHHHTTCEEEEC
T ss_pred CEEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCHHHHHHHHHHcCCceEeC
Confidence 46789999 99999999999999999999999999999999998 5689999999999999998864
No 5
>3fry_A Probable copper-exporting P-type ATPase A; transport protein, metal binding domain, domain SWAP, ATP-BI cell membrane, copper transport; HET: CIT; 2.00A {Archaeoglobus fulgidus}
Probab=99.03 E-value=7.7e-10 Score=88.03 Aligned_cols=66 Identities=29% Similarity=0.473 Sum_probs=61.3
Q ss_pred ccEEEEEEe-cccHHHHHHHHHHHhcCCCeeEEEEecCCcEEEEEecCCHHHHHHHHHHcCCceEEcCC
Q 008811 9 LQSCVLRVN-VDCDGCKQKVKKVLRKIDGVYSTNVDVEQGKVTVTGNVDPAILIKKLEKLGKHAELWGP 76 (552)
Q Consensus 9 ~qkv~LkV~-m~C~gCa~KIekaL~kIeGV~sV~Vdla~~kVtV~g~idpeeII~aI~KaGf~Ael~~~ 76 (552)
+.+++|+|. |+|..|+.+|+++|++ ++|..++|++...+++|+.. ++++|+++|+++||.++++..
T Consensus 4 m~~~~~~v~gm~C~~C~~~ie~~l~~-~gv~~~~v~~~~~~~~v~~~-~~~~i~~~i~~~Gy~~~~~~~ 70 (73)
T 3fry_A 4 VEKIVLELSGLSCHHCVARVKKALEE-AGAKVEKVDLNEAVVAGNKE-DVDKYIKAVEAAGYQAKLRSS 70 (73)
T ss_dssp CEEEEEEEESSBCGGGHHHHHHHHHH-TTCEEEEECSSEEEEEEEGG-GHHHHHHHHHHTTCEEEECCS
T ss_pred cEEEEEEECCCCCHHHHHHHHHHhcc-CCcEEEEEEccCCEEEEEEC-CHHHHHHHHHHcCCceEecCc
Confidence 567889999 9999999999999999 99999999999999999966 899999999999999998764
No 6
>2crl_A Copper chaperone for superoxide dismutase; SOD1, familial ALS, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.03 E-value=7e-10 Score=94.49 Aligned_cols=72 Identities=28% Similarity=0.418 Sum_probs=65.0
Q ss_pred CccEEEEEEecccHHHHHHHHHHHhcCCCeeEEEEecCCcEEEEEecCCHHHHHHHHHHcCCceEEcCCCCC
Q 008811 8 KLQSCVLRVNVDCDGCKQKVKKVLRKIDGVYSTNVDVEQGKVTVTGNVDPAILIKKLEKLGKHAELWGPQKG 79 (552)
Q Consensus 8 ~~qkv~LkV~m~C~gCa~KIekaL~kIeGV~sV~Vdla~~kVtV~g~idpeeII~aI~KaGf~Ael~~~~~~ 79 (552)
.+.+++|+|.|+|..|+.+|+++|.++++|..++|++...+++|+..+++++|+++|+++||.+++|.....
T Consensus 17 ~~~~~~l~V~m~C~~C~~~Ie~aL~~l~GV~~v~vdl~~~~~~V~~~~~~~~i~~~i~~~Gy~~~~~~~~~~ 88 (98)
T 2crl_A 17 TLCTLEFAVQMTCQSCVDAVRKSLQGVAGVQDVEVHLEDQMVLVHTTLPSQEVQALLEGTGRQAVLKGMGSG 88 (98)
T ss_dssp CCEEEEEEECCCSHHHHHHHHHTTTTCTTCCEEEEETTTTEEEEEESSCHHHHHHHHHTTTSCEEEEESCCC
T ss_pred cceEEEEEEeeECHHHHHHHHHHHHcCCCceEEEEECCCCEEEEEEeCCHHHHHHHHHHhCCceEEccCCCC
Confidence 345678888999999999999999999999999999999999999778899999999999999998865543
No 7
>2xmw_A PACS-N, cation-transporting ATPase PACS; hydrolase, Cu(I)-binding, trafficking; 1.80A {Synechocystis SP} PDB: 2gcf_A
Probab=98.91 E-value=7.3e-09 Score=79.18 Aligned_cols=65 Identities=28% Similarity=0.578 Sum_probs=56.8
Q ss_pred cEEEEEEe-cccHHHHHHHHHHHhcCCCeeEEEEecCCcEEEEE--ecCCHHHHHHHHHHcCCceEEc
Q 008811 10 QSCVLRVN-VDCDGCKQKVKKVLRKIDGVYSTNVDVEQGKVTVT--GNVDPAILIKKLEKLGKHAELW 74 (552)
Q Consensus 10 qkv~LkV~-m~C~gCa~KIekaL~kIeGV~sV~Vdla~~kVtV~--g~idpeeII~aI~KaGf~Ael~ 74 (552)
.+++|+|. |+|..|+.+|+++|.++++|..++|++...+++|+ ..++.+.|+++|+++||.++++
T Consensus 3 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~G~~~~~~ 70 (71)
T 2xmw_A 3 QTINLQLEGMRCAACASSIERAIAKVPGVQSCQVNFALEQAVVSYHGETTPQILTDAVERAGYHARVL 70 (71)
T ss_dssp EEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEC---CHHHHHHHHHHHTCEEEEE
T ss_pred cEEEEEECCcccHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCCCHHHHHHHHHHcCCCceeC
Confidence 45679999 99999999999999999999999999999999987 2367889999999999988754
No 8
>1mwy_A ZNTA; open-faced beta-sandwich fold, beta-alpha-beta-BETA-alpha- beta, hydrolase; NMR {Escherichia coli} SCOP: d.58.17.1 PDB: 1mwz_A
Probab=98.89 E-value=1e-08 Score=79.89 Aligned_cols=68 Identities=24% Similarity=0.311 Sum_probs=58.9
Q ss_pred ccEEEEEEe-cccHHHHHHHHHHHhcCCCeeEEEEecCCcEEEEEec-CCHHHHHHHHHHcCCceEEcCC
Q 008811 9 LQSCVLRVN-VDCDGCKQKVKKVLRKIDGVYSTNVDVEQGKVTVTGN-VDPAILIKKLEKLGKHAELWGP 76 (552)
Q Consensus 9 ~qkv~LkV~-m~C~gCa~KIekaL~kIeGV~sV~Vdla~~kVtV~g~-idpeeII~aI~KaGf~Ael~~~ 76 (552)
+.+++|.|. |+|..|+.+|+++|.++++|..++|++...+++|+.. ...+.|+++|+++||.+.....
T Consensus 2 m~~~~~~v~gm~C~~C~~~ie~~l~~~~gV~~~~v~~~~~~~~v~~~~~~~~~i~~~i~~~Gy~~~~~~~ 71 (73)
T 1mwy_A 2 GTRYSWKVSGMDCAACARKVENAVRQLAGVNQVQVLFATEKLVVDADNDIRAQVESALQKAGYSLRDEQA 71 (73)
T ss_dssp CEEEEEEEESCCSTTHHHHHHHHHHTSSSEEEEEEETTTTEEEEEESSCCHHHHHHHHHHHTCEEEECCS
T ss_pred CeEEEEEECCcCCHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCHHHHHHHHHHcCCccccccc
Confidence 456789999 9999999999999999999999999999999998832 2467889999999999876543
No 9
>2l3m_A Copper-ION-binding protein; structural genomics, center for structural genomics of infec diseases, csgid, metal binding protein; NMR {Bacillus anthracis}
Probab=98.88 E-value=9.6e-09 Score=78.92 Aligned_cols=63 Identities=22% Similarity=0.481 Sum_probs=56.9
Q ss_pred ccEEEEEEe-cccHHHHHHHHHHHhcCCCeeEEEEecCCcEEEEE---ecCCHHHHHHHHHHcCCce
Q 008811 9 LQSCVLRVN-VDCDGCKQKVKKVLRKIDGVYSTNVDVEQGKVTVT---GNVDPAILIKKLEKLGKHA 71 (552)
Q Consensus 9 ~qkv~LkV~-m~C~gCa~KIekaL~kIeGV~sV~Vdla~~kVtV~---g~idpeeII~aI~KaGf~A 71 (552)
+.+++|+|. |+|..|+.+|+++|.++++|..+.|++...+++|. ..++.++|+++|+++||.+
T Consensus 4 ~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~ 70 (71)
T 2l3m_A 4 MEQLTLQVEGMSCGHCVNAIESSVKELNGVEQVKVQLAEGTVEVTIDSSVVTLKDIVAVIEDQGYDV 70 (71)
T ss_dssp EEEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETTTSCHHHHHHHHHHTTCEE
T ss_pred cEEEEEEECCccCHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCC
Confidence 456789999 99999999999999999999999999999999987 2468899999999999975
No 10
>2xmm_A SSR2857 protein, ATX1; metal transport, copper homeostasis, chaperone, P-type atpas; 1.65A {Synechocystis SP} PDB: 2xmv_A 1sb6_A 2xmj_A 2xmk_A 2xmt_A 2xmu_A
Probab=98.87 E-value=3.2e-09 Score=79.58 Aligned_cols=61 Identities=25% Similarity=0.428 Sum_probs=56.4
Q ss_pred EEEEEEe-cccHHHHHHHHHHHhcCCCeeEEEEecCCcEEEEEecCCHHHHHHHHHHcCCce
Q 008811 11 SCVLRVN-VDCDGCKQKVKKVLRKIDGVYSTNVDVEQGKVTVTGNVDPAILIKKLEKLGKHA 71 (552)
Q Consensus 11 kv~LkV~-m~C~gCa~KIekaL~kIeGV~sV~Vdla~~kVtV~g~idpeeII~aI~KaGf~A 71 (552)
+++|+|. |+|..|+.+|+++|.++++|..++|++...+++|+..++.+.|+++|+++||.+
T Consensus 2 ~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~i~~~i~~~G~~~ 63 (64)
T 2xmm_A 2 TIQLTVPTIACEACAEAVTKAVQNEDAQATVQVDLTSKKVTITSALGEEQLRTAIASAGYEV 63 (64)
T ss_dssp CEEEECTTCCSHHHHHHHHHHHHHHCTTCEEEECTTTCEEEEECSSCHHHHHHHHHHTTCCC
T ss_pred eEEEEECCcCcHHHHHHHHHHHhcCCCcEEEEEEecCCEEEEEecCCHHHHHHHHHHcCCCC
Confidence 3578898 999999999999999999999999999999999987778899999999999975
No 11
>1osd_A MERP, hypothetical protein MERP; mercury resistance, metal binding protein, perisplasm, structural genomics; 2.00A {Cupriavidus metallidurans} SCOP: d.58.17.1 PDB: 1afi_A 1afj_A 2hqi_A
Probab=98.87 E-value=8.2e-09 Score=79.31 Aligned_cols=65 Identities=28% Similarity=0.403 Sum_probs=58.2
Q ss_pred cEEEEEEe-cccHHHHHHHHHHHhcCCCeeEEEEecCCcEEEEEe---cCCHHHHHHHHHHcCCceEEc
Q 008811 10 QSCVLRVN-VDCDGCKQKVKKVLRKIDGVYSTNVDVEQGKVTVTG---NVDPAILIKKLEKLGKHAELW 74 (552)
Q Consensus 10 qkv~LkV~-m~C~gCa~KIekaL~kIeGV~sV~Vdla~~kVtV~g---~idpeeII~aI~KaGf~Ael~ 74 (552)
.+++|+|. |+|..|+.+|+++|.++++|..++|++...+++|.. .++.+.|+++|+++||.+++.
T Consensus 3 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~ 71 (72)
T 1osd_A 3 QTVTLSVPGMTCSACPITVKKAISKVEGVSKVDVTFETRQAVVTFDDAKTSVQKLTKATADAGYPSSVK 71 (72)
T ss_dssp EEEEEECTTCCSTTHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETTTCCHHHHHHHHHHTTCCCEEC
T ss_pred eEEEEEECCeEcHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHhcCCCeEec
Confidence 46789999 999999999999999999999999999999999872 367889999999999988664
No 12
>1aw0_A Menkes copper-transporting ATPase; copper-binding domain, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 2aw0_A
Probab=98.87 E-value=8.8e-09 Score=79.13 Aligned_cols=65 Identities=29% Similarity=0.457 Sum_probs=58.2
Q ss_pred cEEEEEEe-cccHHHHHHHHHHHhcCCCeeEEEEecCCcEEEEEe---cCCHHHHHHHHHHcCCceEEc
Q 008811 10 QSCVLRVN-VDCDGCKQKVKKVLRKIDGVYSTNVDVEQGKVTVTG---NVDPAILIKKLEKLGKHAELW 74 (552)
Q Consensus 10 qkv~LkV~-m~C~gCa~KIekaL~kIeGV~sV~Vdla~~kVtV~g---~idpeeII~aI~KaGf~Ael~ 74 (552)
++++|+|. |+|..|+.+|+++|.++++|..++|++...+++|.. .++.+.|+++|+++||.+++.
T Consensus 3 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~ 71 (72)
T 1aw0_A 3 QETVINIDGMTCNSCVQSIEGVISKKPGVKSIRVSLANSNGTVEYDPLLTSPETLRGAIEDMGFDATLS 71 (72)
T ss_dssp EEEEEEEECCCHHHHHHHHHHHHHTSTTCCCEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTCEEEEC
T ss_pred eEEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCcCCHHHHHHHHHHCCCCcEeC
Confidence 45689999 999999999999999999999999999999999873 267889999999999987764
No 13
>1y3j_A Copper-transporting ATPase 1; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta structure, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1y3k_A
Probab=98.87 E-value=5.1e-09 Score=82.51 Aligned_cols=69 Identities=25% Similarity=0.510 Sum_probs=61.0
Q ss_pred ccEEEEEEe-cccHHHHHHHHHHHhcCCCeeEEEEecCCcEEEEEe---cCCHHHHHHHHHHcCCceEEcCCC
Q 008811 9 LQSCVLRVN-VDCDGCKQKVKKVLRKIDGVYSTNVDVEQGKVTVTG---NVDPAILIKKLEKLGKHAELWGPQ 77 (552)
Q Consensus 9 ~qkv~LkV~-m~C~gCa~KIekaL~kIeGV~sV~Vdla~~kVtV~g---~idpeeII~aI~KaGf~Ael~~~~ 77 (552)
+.+++|+|. |+|..|+.+|+++|.++++|..++|++...+++|+. .++++.|+++|+++||.+.++...
T Consensus 2 m~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~~ 74 (77)
T 1y3j_A 2 SSKCYIQVTGMTCASCVANIERNLRREEGIYSILVALMAGKAEVRYNPAVIQPPMIAEFIRELGFGATVIENI 74 (77)
T ss_dssp CEEEEEEESCGGGCSHHHHHHHHHTTSSSEEECCCBTTTTBEEEEECTTTSCHHHHHHHHHHHTSCEEEESCC
T ss_pred CEEEEEEECCeeCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCceEECCcc
Confidence 456789999 999999999999999999999999999999999872 367889999999999998876543
No 14
>2g9o_A Copper-transporting ATPase 1; menkes disease, solution structure, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} PDB: 2ga7_A
Probab=98.86 E-value=8.9e-09 Score=85.35 Aligned_cols=70 Identities=19% Similarity=0.286 Sum_probs=60.7
Q ss_pred cEEEEEEe-cccHHHHHHHHHHHhcCCCeeEEEEecCCcEEEEEe---cCCHHHHHHHHHHc---CCceEEcCCCCC
Q 008811 10 QSCVLRVN-VDCDGCKQKVKKVLRKIDGVYSTNVDVEQGKVTVTG---NVDPAILIKKLEKL---GKHAELWGPQKG 79 (552)
Q Consensus 10 qkv~LkV~-m~C~gCa~KIekaL~kIeGV~sV~Vdla~~kVtV~g---~idpeeII~aI~Ka---Gf~Ael~~~~~~ 79 (552)
.+++|+|. |+|..|+.+|+++|.++++|..++|++...+++|+. .+++++|+++|+++ +|.+.++.....
T Consensus 3 ~~~~l~v~Gm~C~~C~~~Ie~~L~~~~GV~~v~v~l~~~~~~V~~~~~~~~~~~i~~~i~~~g~Ggy~~~~~~~~~~ 79 (90)
T 2g9o_A 3 STATFIIDGMHCKSCVSNIESTLSALQYVSSIVVSLENRSAIVVYNASSVTPESLRKAIEAVSPGLYRVSITSEVEI 79 (90)
T ss_dssp EEEEEEEESCCHHHHHHHHHHHHTTCTTEEEEEEETTTTEEEEEECCSSCCTHHHHHHHHTTSTTTCEEECCCCC--
T ss_pred cEEEEEECCcCCHHHHHHHHHHHHcCCCeeEEEEEccCCEEEEEECCCCCCHHHHHHHHHhccCCCeEEEEeCCCcc
Confidence 45789999 999999999999999999999999999999999872 46788999999999 599888776543
No 15
>2roe_A Heavy metal binding protein; NMR {Thermus thermophilus} PDB: 2rog_A
Probab=98.85 E-value=3.9e-09 Score=80.95 Aligned_cols=62 Identities=35% Similarity=0.657 Sum_probs=57.0
Q ss_pred EEEEe-cccHHHHHHHHHHHhcCCCeeEEEEecCCcEEEEEecCCHHHHHHHHHHcCCceEEc
Q 008811 13 VLRVN-VDCDGCKQKVKKVLRKIDGVYSTNVDVEQGKVTVTGNVDPAILIKKLEKLGKHAELW 74 (552)
Q Consensus 13 ~LkV~-m~C~gCa~KIekaL~kIeGV~sV~Vdla~~kVtV~g~idpeeII~aI~KaGf~Ael~ 74 (552)
+|+|. |+|..|+.+|+++|.++++|.+++|++...+++|...++++.|+++|+++||.++++
T Consensus 3 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~i~~~i~~~Gy~~~~~ 65 (66)
T 2roe_A 3 KLKVEGMTCNHCVMAVTKALKKVPGVEKVEVSLEKGEALVEGTADPKALVQAVEEEGYKAEVL 65 (66)
T ss_dssp CEEEECCCSHHHHHHHHHHHHTSTTCCCEEECSSSCBEEECSCCCHHHHHHHHHTTTCEEEEC
T ss_pred EEEECCeEcHHHHHHHHHHHHcCCCeEEEEEEeCCCEEEECCCCCHHHHHHHHHHcCCCcEec
Confidence 58898 999999999999999999999999999999999965678999999999999988764
No 16
>2qif_A Copper chaperone COPZ; tetranuclear Cu(I) cluster; 1.50A {Bacillus subtilis} SCOP: d.58.17.1 PDB: 3i9z_A 1k0v_A 1p8g_A
Probab=98.84 E-value=1.6e-08 Score=75.86 Aligned_cols=62 Identities=27% Similarity=0.520 Sum_probs=55.7
Q ss_pred cEEEEEEe-cccHHHHHHHHHHHhcCCCeeEEEEecCCcEEEEE---ecCCHHHHHHHHHHcCCce
Q 008811 10 QSCVLRVN-VDCDGCKQKVKKVLRKIDGVYSTNVDVEQGKVTVT---GNVDPAILIKKLEKLGKHA 71 (552)
Q Consensus 10 qkv~LkV~-m~C~gCa~KIekaL~kIeGV~sV~Vdla~~kVtV~---g~idpeeII~aI~KaGf~A 71 (552)
.+++|+|. |+|..|+.+|+++|..+++|..+.|++...+++|+ ..++.+.|+++|+++||.+
T Consensus 2 ~~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~ 67 (69)
T 2qif_A 2 EQKTLQVEGMSCQHCVKAVETSVGELDGVSAVHVNLEAGKVDVSFDADKVSVKDIADAIEDQGYDV 67 (69)
T ss_dssp EEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHTTCEE
T ss_pred eEEEEEECCcccHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCc
Confidence 35679999 99999999999999999999999999999999987 2467889999999999975
No 17
>3cjk_B Copper-transporting ATPase 1; HAH1, ATP7B, menkes disease, metal homeostasis, chaperone, ION transport, metal- binding, alternative splicing; 1.80A {Homo sapiens} PDB: 2k1r_A
Probab=98.84 E-value=1.8e-08 Score=78.59 Aligned_cols=65 Identities=22% Similarity=0.445 Sum_probs=58.4
Q ss_pred EEEEEEe-cccHHHHHHHHHHHhcCCCeeEEEEecCCcEEEEEe---cCCHHHHHHHHHHcCCceEEcC
Q 008811 11 SCVLRVN-VDCDGCKQKVKKVLRKIDGVYSTNVDVEQGKVTVTG---NVDPAILIKKLEKLGKHAELWG 75 (552)
Q Consensus 11 kv~LkV~-m~C~gCa~KIekaL~kIeGV~sV~Vdla~~kVtV~g---~idpeeII~aI~KaGf~Ael~~ 75 (552)
+++|.|. |+|..|+.+|+++|.++++|..+.|++...+++|.. .++.++|+++|+++||.++++.
T Consensus 3 ~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~ 71 (75)
T 3cjk_B 3 SVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAIDDMGFDAVIHN 71 (75)
T ss_dssp EEEEEECCCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHTTCCEEEEE
T ss_pred EEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCceEeec
Confidence 5678999 999999999999999999999999999999999872 3678899999999999987754
No 18
>1opz_A Potential copper-transporting ATPase; mutation, folding, abbab fold, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 1oq3_A 1oq6_A
Probab=98.84 E-value=1.3e-08 Score=78.52 Aligned_cols=66 Identities=27% Similarity=0.535 Sum_probs=59.1
Q ss_pred ccEEEEEEe-cccHHHHHHHHHHHhcCCCeeEEEEecCCcEEEEE---ecCCHHHHHHHHHHcCCceEEc
Q 008811 9 LQSCVLRVN-VDCDGCKQKVKKVLRKIDGVYSTNVDVEQGKVTVT---GNVDPAILIKKLEKLGKHAELW 74 (552)
Q Consensus 9 ~qkv~LkV~-m~C~gCa~KIekaL~kIeGV~sV~Vdla~~kVtV~---g~idpeeII~aI~KaGf~Ael~ 74 (552)
+.+++|+|. |+|..|+.+|+++|.++++|..+.|++...+++|+ ..++.+.|+++|+++||.++++
T Consensus 5 ~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~ 74 (76)
T 1opz_A 5 QKEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIEKLGYHVVIE 74 (76)
T ss_dssp CEEEEEEEESCCSTTHHHHHHHHHHTSTTEEEEEEEGGGTEEEEEECTTTCCHHHHHHHHHHHTCEEECC
T ss_pred ceEEEEEECCcccHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHCCCceecC
Confidence 456789999 99999999999999999999999999999999987 2467889999999999988765
No 19
>1kvi_A Copper-transporting ATPase 1; menkes, Cu-protein, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1kvj_A
Probab=98.83 E-value=8.4e-09 Score=81.45 Aligned_cols=68 Identities=22% Similarity=0.475 Sum_probs=60.3
Q ss_pred ccEEEEEEe-cccHHHHHHHHHHHhcCCCeeEEEEecCCcEEEEEe---cCCHHHHHHHHHHcCCceEEcCC
Q 008811 9 LQSCVLRVN-VDCDGCKQKVKKVLRKIDGVYSTNVDVEQGKVTVTG---NVDPAILIKKLEKLGKHAELWGP 76 (552)
Q Consensus 9 ~qkv~LkV~-m~C~gCa~KIekaL~kIeGV~sV~Vdla~~kVtV~g---~idpeeII~aI~KaGf~Ael~~~ 76 (552)
..+++|+|. |+|..|+.+|+++|.++++|..++|++...+++|+. .++.++|+++|+++||.+++...
T Consensus 7 ~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~ 78 (79)
T 1kvi_A 7 VNSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAIDDMGFDAVIHNP 78 (79)
T ss_dssp CEEEEEEECCCCSTTTHHHHHHHHHHSSSCCCEEEEGGGTEEEEEECTTTCCHHHHHHHHHHHCCCEEECCC
T ss_pred cEEEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCCCCHHHHHHHHHHCCCceEecCC
Confidence 456789999 999999999999999999999999999999999872 36788999999999999877653
No 20
>1q8l_A Copper-transporting ATPase 1; metal binding protein; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1s6o_A 1s6u_A
Probab=98.82 E-value=1.1e-08 Score=82.75 Aligned_cols=69 Identities=17% Similarity=0.313 Sum_probs=61.3
Q ss_pred ccEEEEEEe-cccHHHHHHHHHHHhcCCCeeEEEEecCCcEEEEEe---cCCHHHHHHHHHHcCCceEEcCCC
Q 008811 9 LQSCVLRVN-VDCDGCKQKVKKVLRKIDGVYSTNVDVEQGKVTVTG---NVDPAILIKKLEKLGKHAELWGPQ 77 (552)
Q Consensus 9 ~qkv~LkV~-m~C~gCa~KIekaL~kIeGV~sV~Vdla~~kVtV~g---~idpeeII~aI~KaGf~Ael~~~~ 77 (552)
..+++|+|. |+|..|+.+|+++|.++++|..++|++...+++|+. .++.++|+++|+++||.++++...
T Consensus 8 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~~ 80 (84)
T 1q8l_A 8 EVVLKMKVEGMTCHSCTSTIEGKIGKLQGVQRIKVSLDNQEATIVYQPHLISVEEMKKQIEAMGFPAFVKKQP 80 (84)
T ss_dssp CEEEEEEECCTTTCSSCHHHHHHHHTCTTEEEEEECSTTTEEEEEECTTTCCHHHHHHHHHHTTCCEECSCCT
T ss_pred ceEEEEEECCcccHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCceEecCCc
Confidence 456789999 999999999999999999999999999999999873 367899999999999998876643
No 21
>1fvq_A Copper-transporting ATPase; APO-CCC2A, hydrolase; NMR {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1fvs_A 2ggp_B
Probab=98.81 E-value=1.4e-08 Score=78.01 Aligned_cols=65 Identities=22% Similarity=0.462 Sum_probs=58.9
Q ss_pred EEEEEEe-cccHHHHHHHHHHHhcCCCeeEEEEecCCcEEEEE--ecCCHHHHHHHHHHcCCceEEcC
Q 008811 11 SCVLRVN-VDCDGCKQKVKKVLRKIDGVYSTNVDVEQGKVTVT--GNVDPAILIKKLEKLGKHAELWG 75 (552)
Q Consensus 11 kv~LkV~-m~C~gCa~KIekaL~kIeGV~sV~Vdla~~kVtV~--g~idpeeII~aI~KaGf~Ael~~ 75 (552)
+++|+|. |+|..|+.+|+++|.++++|..++|++...+++|+ ..++.+.|+++|+++||.++++.
T Consensus 3 ~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~G~~~~~~~ 70 (72)
T 1fvq_A 3 EVILAVHGMTCSACTNTINTQLRALKGVTKCDISLVTNECQVTYDNEVTADSIKEIIEDCGFDCEILR 70 (72)
T ss_dssp EEEEEECSCCSHHHHHHHHHHHHTSSSEEEECCBTTTTEEEEEECTTSCHHHHHHHHHHHTCCEEEEE
T ss_pred EEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCHHHHHHHHHHCCCceEEcc
Confidence 5679999 99999999999999999999999999999999987 34678899999999999988874
No 22
>1yjr_A Copper-transporting ATPase 1; metallochaperone, protein-protein interaction, copper(I), metal homeostasis, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1yjt_A 1yju_A 1yjv_A
Probab=98.80 E-value=1.5e-08 Score=78.47 Aligned_cols=66 Identities=24% Similarity=0.392 Sum_probs=57.9
Q ss_pred cEEEEEEe-cccHHHHHHHHHHHhcCCCeeEEEEecCCcEEEEEe---cCCHHHHHHHHHHcCCceEEcC
Q 008811 10 QSCVLRVN-VDCDGCKQKVKKVLRKIDGVYSTNVDVEQGKVTVTG---NVDPAILIKKLEKLGKHAELWG 75 (552)
Q Consensus 10 qkv~LkV~-m~C~gCa~KIekaL~kIeGV~sV~Vdla~~kVtV~g---~idpeeII~aI~KaGf~Ael~~ 75 (552)
.+++|+|. |+|..|+.+|+++|.++++|..+++++...+++|.. .++++.|+++|+++||.+.+..
T Consensus 4 ~~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~~ 73 (75)
T 1yjr_A 4 GVLELVVRGMTCASCVHKIESSLTKHRGILYCSVALATNKAHIKYDPEIIGPRDIIHTIESLGFEPSLVK 73 (75)
T ss_dssp CCEEEEEETCCTTTHHHHHHHHHTTSTTEEEEEEETTTTEEEEEECTTTTHHHHHHHHHHHHHCEEEESS
T ss_pred eEEEEEECCcccHHHHHHHHHHHHcCCCEEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCceeec
Confidence 35679999 999999999999999999999999999999999873 2567889999999999887643
No 23
>2kt2_A Mercuric reductase; nmera, MERA, HMA domain, mercuric resist metal-binding, oxidoreductase; NMR {Pseudomonas aeruginosa} PDB: 2kt3_A
Probab=98.80 E-value=1.2e-08 Score=78.03 Aligned_cols=63 Identities=30% Similarity=0.519 Sum_probs=56.3
Q ss_pred EEEEe-cccHHHHHHHHHHHhcCCCeeEEEEecCCcEEEEE--ecCCHHHHHHHHHHcCCceEEcC
Q 008811 13 VLRVN-VDCDGCKQKVKKVLRKIDGVYSTNVDVEQGKVTVT--GNVDPAILIKKLEKLGKHAELWG 75 (552)
Q Consensus 13 ~LkV~-m~C~gCa~KIekaL~kIeGV~sV~Vdla~~kVtV~--g~idpeeII~aI~KaGf~Ael~~ 75 (552)
+|.|. |+|..|+.+|+++|.++++|..++|++...+++|. ..+..++|+++|+++||.+++..
T Consensus 3 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~Gy~~~~~~ 68 (69)
T 2kt2_A 3 HLKITGMTCDSCAAHVKEALEKVPGVQSALVSYPKGTAQLAIVPGTSPDALTAAVAGLGYKATLAD 68 (69)
T ss_dssp CEEEESSCSTHHHHHHHHHHHHSTTEEEEEEETTTTEEEEEECTTSCHHHHHHHHHTTTSEEECCC
T ss_pred EEEECCcccHHHHHHHHHHHHcCCCeeEEEEEccCCEEEEEECCCCCHHHHHHHHHHCCCceEeCC
Confidence 48888 99999999999999999999999999999999987 23678899999999999887643
No 24
>1jww_A Potential copper-transporting ATPase; beta-alpha-beta-BETA-alpha-beta, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 2voy_A 1kqk_A
Probab=98.79 E-value=1.9e-08 Score=78.98 Aligned_cols=68 Identities=28% Similarity=0.488 Sum_probs=60.2
Q ss_pred cEEEEEEe-cccHHHHHHHHHHHhcCCCeeEEEEecCCcEEEEE---ecCCHHHHHHHHHHcCCceEEcCCC
Q 008811 10 QSCVLRVN-VDCDGCKQKVKKVLRKIDGVYSTNVDVEQGKVTVT---GNVDPAILIKKLEKLGKHAELWGPQ 77 (552)
Q Consensus 10 qkv~LkV~-m~C~gCa~KIekaL~kIeGV~sV~Vdla~~kVtV~---g~idpeeII~aI~KaGf~Ael~~~~ 77 (552)
.+++|+|. |+|..|+.+|+++|.++++|..+.|++...+++|. ..++.+.|+++|+++||.+.++...
T Consensus 3 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~~~~ 74 (80)
T 1jww_A 3 EKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVDKLGYKLKLKGEQ 74 (80)
T ss_dssp EEEEEEEESCCCHHHHHHHHHHHHTSTTEEECCCCSSSSEEEEEECTTTCCHHHHHHHHHHHTSEEEECCSS
T ss_pred eEEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCeEEecCcc
Confidence 46789999 99999999999999999999999999999999987 2467889999999999998886543
No 25
>2k2p_A Uncharacterized protein ATU1203; putative metal-binding domain ATU1203, ontario centre for ST proteomics, structural genomics; NMR {Agrobacterium tumefaciens str}
Probab=98.79 E-value=8.2e-09 Score=85.52 Aligned_cols=63 Identities=19% Similarity=0.251 Sum_probs=57.9
Q ss_pred ccEEEEEEe-cccHHHHHHHHHHHhcCCCeeEEEEecCCcEEEEEecCCHHHHHHHHHHcCCce
Q 008811 9 LQSCVLRVN-VDCDGCKQKVKKVLRKIDGVYSTNVDVEQGKVTVTGNVDPAILIKKLEKLGKHA 71 (552)
Q Consensus 9 ~qkv~LkV~-m~C~gCa~KIekaL~kIeGV~sV~Vdla~~kVtV~g~idpeeII~aI~KaGf~A 71 (552)
+.+++|+|. |+|..|+.+|+++|.++++|..++|++...+++|+..+++++|+++|+++||.+
T Consensus 21 ~~~~~l~V~Gm~C~~C~~~Ie~aL~~~~GV~~v~v~l~~~~~~V~~~~~~~~i~~~i~~~Gy~~ 84 (85)
T 2k2p_A 21 GAGLSFHVEDMTCGHCAGVIKGAIEKTVPGAAVHADPASRTVVVGGVSDAAHIAEIITAAGYTP 84 (85)
T ss_dssp -CEEEEECTTCCHHHHHHHHHHHHHHHSTTCEEEEETTTTEEEEESCCCHHHHHHHHHHTTCCC
T ss_pred ccEEEEEECCCCCHHHHHHHHHHHhcCCCeeEEEEECCCCEEEEEecCCHHHHHHHHHHcCCCC
Confidence 456789998 999999999999999999999999999999999987788999999999999975
No 26
>1cpz_A Protein (COPZ); copper chaperone, metal transport, gene regulation; NMR {Enterococcus hirae} SCOP: d.58.17.1
Probab=98.78 E-value=1.8e-08 Score=76.38 Aligned_cols=62 Identities=24% Similarity=0.498 Sum_probs=56.0
Q ss_pred EEEEe-cccHHHHHHHHHHHhcCCCeeEEEEecCCcEEEEEe---cCCHHHHHHHHHHcCCceEEc
Q 008811 13 VLRVN-VDCDGCKQKVKKVLRKIDGVYSTNVDVEQGKVTVTG---NVDPAILIKKLEKLGKHAELW 74 (552)
Q Consensus 13 ~LkV~-m~C~gCa~KIekaL~kIeGV~sV~Vdla~~kVtV~g---~idpeeII~aI~KaGf~Ael~ 74 (552)
+|+|. |+|..|+.+|+++|.++++|..+++++...+++|+. .++.++|+++|+++||.++++
T Consensus 3 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~ 68 (68)
T 1cpz_A 3 EFSVKGMSCNHCVARIEEAVGRISGVKKVKVQLKKEKAVVKFDEANVQATEICQAINELGYQAEVI 68 (68)
T ss_dssp EEEESCCCSSSHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHTTSSCEEEC
T ss_pred EEEECCeeCHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCcccC
Confidence 58898 999999999999999999999999999999999873 367889999999999988763
No 27
>2kkh_A Putative heavy metal transporter; zinc transport, metal binding, metal selectivity, ferredoxin fold, ATP-binding, hydrolase; NMR {Arabidopsis thaliana}
Probab=98.78 E-value=3e-08 Score=82.31 Aligned_cols=74 Identities=24% Similarity=0.276 Sum_probs=64.4
Q ss_pred CccEEEEEEe-cccHHHHHHHHHHHhcCCCeeEEEEecCCcEEEEEe---cCCHHHHHHHHHHcCCceEEcCCCCCCC
Q 008811 8 KLQSCVLRVN-VDCDGCKQKVKKVLRKIDGVYSTNVDVEQGKVTVTG---NVDPAILIKKLEKLGKHAELWGPQKGSS 81 (552)
Q Consensus 8 ~~qkv~LkV~-m~C~gCa~KIekaL~kIeGV~sV~Vdla~~kVtV~g---~idpeeII~aI~KaGf~Ael~~~~~~~~ 81 (552)
.+.+++|.|. |+|..|+.+|+++|..+++|..+.|++...+++|+. .++.+.|+++|+.+||.+.++.....++
T Consensus 14 ~~~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~~~~~~ 91 (95)
T 2kkh_A 14 KLQKSYFDVLGICCTSEVPIIENILKSLDGVKEYSVIVPSRTVIVVHDSLLISPFQIAKALNEARLEANVRVNGETSF 91 (95)
T ss_dssp CSEEEEEEETTCCTTTTHHHHHHHHHHSSSEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTCCEEESCCCCCCS
T ss_pred ceEEEEEEECCcCCHHHHHHHHHHHhcCCCeeEEEEEccCCEEEEEECCCCCCHHHHHHHHHHcCCceEEecCCCccc
Confidence 3557889999 999999999999999999999999999999999873 2578899999999999998877666544
No 28
>1yg0_A COP associated protein; open-faced beta-sandwich, missing C-terminal beta-sheet, Met transport; NMR {Helicobacter pylori}
Probab=98.73 E-value=2.6e-08 Score=75.01 Aligned_cols=61 Identities=25% Similarity=0.461 Sum_probs=54.6
Q ss_pred EEEEEEe-cccHHHHHHHHHHHhcCCCeeEEEEecCCcEEEEEe--cCCHHHHHHHHHHcCCce
Q 008811 11 SCVLRVN-VDCDGCKQKVKKVLRKIDGVYSTNVDVEQGKVTVTG--NVDPAILIKKLEKLGKHA 71 (552)
Q Consensus 11 kv~LkV~-m~C~gCa~KIekaL~kIeGV~sV~Vdla~~kVtV~g--~idpeeII~aI~KaGf~A 71 (552)
+++|+|. |+|..|+.+|+++|.++++|..+++++...+++|+. ..+.++|+++|+++||.+
T Consensus 2 ~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~G~~~ 65 (66)
T 1yg0_A 2 KATFQVPSITCNHCVDKIEKFVGEIEGVSFIDVSVEKKSVVVEFDAPATQDLIKEALLDAGQEV 65 (66)
T ss_dssp EEEECCTTCSCSHHHHHHHHHHTTSSSEEEEEEETTTTEEEEEECTTCCHHHHHHHHHHHTCCC
T ss_pred eEEEEECCcccHHHHHHHHHHHhcCCCceEEEEEcCCCEEEEEECCCCCHHHHHHHHHHcCCCc
Confidence 4568888 999999999999999999999999999999999872 247888999999999975
No 29
>2ldi_A Zinc-transporting ATPase; metal homeostasis, metallochaperones, hydrolase; NMR {Synechocystis SP}
Probab=98.73 E-value=2e-08 Score=76.07 Aligned_cols=64 Identities=25% Similarity=0.531 Sum_probs=56.8
Q ss_pred ccEEEEEEe-cccHHHHHHHHHHHhcCCCeeEEEEecCCcEEEEEe---cCCHHHHHHHHHHcCCceE
Q 008811 9 LQSCVLRVN-VDCDGCKQKVKKVLRKIDGVYSTNVDVEQGKVTVTG---NVDPAILIKKLEKLGKHAE 72 (552)
Q Consensus 9 ~qkv~LkV~-m~C~gCa~KIekaL~kIeGV~sV~Vdla~~kVtV~g---~idpeeII~aI~KaGf~Ae 72 (552)
+.+++|+|. |+|..|+.+|+++|.++++|..++|++...+++|+. .++.+.|+++|+++||.++
T Consensus 2 ~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~ 69 (71)
T 2ldi_A 2 LKTQQMQVGGMRCAACASSIERALERLKGVAEASVTVATGRLTVTYDPKQVSEITIQERIAALGYTLA 69 (71)
T ss_dssp CEEEEEEEETCTTSGGGHHHHTGGGGCSSEEEEEEETTTTEEEEEECTTTCCTHHHHHHHHTTTCEEE
T ss_pred cEEEEEEECCccCHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCcc
Confidence 346779999 999999999999999999999999999999999872 3677889999999999764
No 30
>2kyz_A Heavy metal binding protein; structural genomics, PSI-biology, protein structure initiative, joint for structural genomics, JCSG; NMR {Thermotoga maritima}
Probab=98.68 E-value=2.4e-08 Score=76.89 Aligned_cols=62 Identities=34% Similarity=0.541 Sum_probs=54.7
Q ss_pred EEEEEEe-cccHHHHHHHHHHHhcCCCeeEEEEecCCcEEEEEecCCHHHHHHHHHHcCCceEEc
Q 008811 11 SCVLRVN-VDCDGCKQKVKKVLRKIDGVYSTNVDVEQGKVTVTGNVDPAILIKKLEKLGKHAELW 74 (552)
Q Consensus 11 kv~LkV~-m~C~gCa~KIekaL~kIeGV~sV~Vdla~~kVtV~g~idpeeII~aI~KaGf~Ael~ 74 (552)
+++|+|. |+|..|+.+|+++|.++ +|..++|++...+++|..... ++|+++|+++||.+.++
T Consensus 2 ~~~~~v~gm~C~~C~~~i~~~l~~~-gv~~~~v~~~~~~~~v~~~~~-~~i~~~i~~~Gy~~~~~ 64 (67)
T 2kyz_A 2 RYVLYVPDISCNHCKMRISKALEEL-GVKNYEVSVEEKKVVVETENL-DSVLKKLEEIDYPVESY 64 (67)
T ss_dssp EEEEECGGGGSHHHHHHHHHHHHHH-TCSEEEEETTTTEEEEECSCH-HHHHHHHHTTTCCCCBC
T ss_pred eEEEEECCcCcHHHHHHHHHHHHHc-CCeEEEEECCCCEEEEEECCH-HHHHHHHHHcCCceeeE
Confidence 3578898 99999999999999999 999999999999999985434 88999999999987654
No 31
>2ofg_X Zinc-transporting ATPase; ferredoxin-like fold, beta-alpha-beta-BETA-alpha-beta, struc genomics, hydrolase, membrane protein; NMR {Synechocystis SP} PDB: 2ofh_X
Probab=98.68 E-value=6e-08 Score=83.73 Aligned_cols=66 Identities=29% Similarity=0.502 Sum_probs=59.0
Q ss_pred ccEEEEEEe-cccHHHHHHHHHHHhcCCCeeEEEEecCCcEEEEEe---cCCHHHHHHHHHHcCCceEEc
Q 008811 9 LQSCVLRVN-VDCDGCKQKVKKVLRKIDGVYSTNVDVEQGKVTVTG---NVDPAILIKKLEKLGKHAELW 74 (552)
Q Consensus 9 ~qkv~LkV~-m~C~gCa~KIekaL~kIeGV~sV~Vdla~~kVtV~g---~idpeeII~aI~KaGf~Ael~ 74 (552)
+.+++|+|. |+|..|+.+|+++|.++++|..++|++...+++|+. .++.++|+++|+++||.+.+.
T Consensus 7 ~~~~~l~v~Gm~C~~Ca~~Ie~~L~~~~GV~~v~v~~~~~~~~V~~~~~~~~~~~i~~~i~~~Gy~~~~~ 76 (111)
T 2ofg_X 7 LKTQQMQVGGMDCTSCKLKIEGSLERLKGVAEASVTVATGRLTVTYDPKQVSEITIQERIAALGYTLAEP 76 (111)
T ss_dssp CEEEEEEESCCCGGGTHHHHHHHHTTSSSEEEEEEETTTTEEEEEECTTTCSHHHHHHHHHTTTCCEECC
T ss_pred ceEEEEEECCcCCHHHHHHHHHHHHcCCCeeEEEEECCCCEEEEEECCCCCCHHHHHHHHHHcCCeeeec
Confidence 456789999 999999999999999999999999999999999872 367889999999999987654
No 32
>1qup_A Superoxide dismutase 1 copper chaperone; two domains, beta-alpha-beta-BETA-alpha-beta and beta barrel; 1.80A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1
Probab=98.67 E-value=5.7e-08 Score=95.19 Aligned_cols=71 Identities=28% Similarity=0.554 Sum_probs=64.4
Q ss_pred cEEEEEEecccHHHHHHHHHHHhcCCCeeEEEEecCCcEEEEEecCCHHHHHHHHHHcCCceEEcCCCCCC
Q 008811 10 QSCVLRVNVDCDGCKQKVKKVLRKIDGVYSTNVDVEQGKVTVTGNVDPAILIKKLEKLGKHAELWGPQKGS 80 (552)
Q Consensus 10 qkv~LkV~m~C~gCa~KIekaL~kIeGV~sV~Vdla~~kVtV~g~idpeeII~aI~KaGf~Ael~~~~~~~ 80 (552)
.+++|+|+|+|..|+.+|+++|+++++|.+++|++...+++|+..+++++|+++|+++||.++++.....+
T Consensus 6 ~~~~l~V~MtC~~Ca~~IekaL~~l~GV~~v~Vnl~~~~v~V~~~~~~~~I~~aI~~~Gy~a~~~~~~~~~ 76 (222)
T 1qup_A 6 YEATYAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLRNCGKDAIIRGAGKPN 76 (222)
T ss_dssp EEEEEECCCCSTTHHHHHHHHHTTCTTEEEEEEETTTTEEEEEESSCHHHHHHHHHHTTCCCEEECCSCTT
T ss_pred eEEEEEEccccHHHHHHHHHHHhcCCCeeEEEEEcCCCEEEEeccCCHHHHHHHHHHcCCccccccCCCcc
Confidence 35678888999999999999999999999999999999999997789999999999999999998766554
No 33
>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A
Probab=98.66 E-value=5.7e-08 Score=86.04 Aligned_cols=69 Identities=28% Similarity=0.483 Sum_probs=61.9
Q ss_pred cEEEEEEe-cccHHHHHHHHHHHhcCCCeeEEEEecCCcEEEEE---ecCCHHHHHHHHHHcCCceEEcCCCC
Q 008811 10 QSCVLRVN-VDCDGCKQKVKKVLRKIDGVYSTNVDVEQGKVTVT---GNVDPAILIKKLEKLGKHAELWGPQK 78 (552)
Q Consensus 10 qkv~LkV~-m~C~gCa~KIekaL~kIeGV~sV~Vdla~~kVtV~---g~idpeeII~aI~KaGf~Ael~~~~~ 78 (552)
.+++|+|. |+|..|+.+|+++|.++++|..++|++...+++|+ ..+++++|+++|+++||.+.++....
T Consensus 74 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~~~ 146 (151)
T 1p6t_A 74 EKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVDKLGYKLKLKGEQD 146 (151)
T ss_dssp EEEEEEESSCCSSSHHHHHHHHHTTSSSEEECCEETTTTEEEEEECTTTCCHHHHHHHHHHHTCCEEESCSSS
T ss_pred cccEEEecCCCCHHHHHHHHHHHhcCCCceEEEEEccCCEEEEEECCCCCCHHHHHHHHHHcCCCeEEcCccc
Confidence 45789998 99999999999999999999999999999999997 34789999999999999998876543
No 34
>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens}
Probab=98.65 E-value=7.5e-08 Score=84.67 Aligned_cols=65 Identities=25% Similarity=0.449 Sum_probs=58.8
Q ss_pred cEEEEEEe-cccHHHHHHHHHHHhcCCCeeEEEEecCCcEEEEEe---cCCHHHHHHHHHHcCCceEEc
Q 008811 10 QSCVLRVN-VDCDGCKQKVKKVLRKIDGVYSTNVDVEQGKVTVTG---NVDPAILIKKLEKLGKHAELW 74 (552)
Q Consensus 10 qkv~LkV~-m~C~gCa~KIekaL~kIeGV~sV~Vdla~~kVtV~g---~idpeeII~aI~KaGf~Ael~ 74 (552)
.+++|+|. |+|..|+.+|+++|.+++||..++|++...+++|+. .+++++|+++|+++||.++++
T Consensus 80 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~ 148 (149)
T 2ew9_A 80 GNIELTITGMTCASCVHNIESKLTRTNGITYASVALATSKALVKFDPEIIGPRDIIKIIEEIGFHASLA 148 (149)
T ss_dssp SEEEEEEESCCSHHHHHHHHHHHHHSSSCCEEEEETTTTEEEEECCTTTSCHHHHHHHHHHHTCEEECC
T ss_pred ceeEEEEEeccCHHHHHHHHHHHhcCCCeEEEEEEcCCCEEEEEECCCCCCHHHHHHHHHhCCCceEec
Confidence 46789999 999999999999999999999999999999999972 368899999999999988764
No 35
>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens}
Probab=98.53 E-value=2.1e-07 Score=87.59 Aligned_cols=69 Identities=19% Similarity=0.457 Sum_probs=59.6
Q ss_pred cEEEEEEe-cccHHHHHHHHHHHhcCCCeeEEEEecCCcEEEEE---ecCCHHHHHHHHHHcCCceEEcCCCC
Q 008811 10 QSCVLRVN-VDCDGCKQKVKKVLRKIDGVYSTNVDVEQGKVTVT---GNVDPAILIKKLEKLGKHAELWGPQK 78 (552)
Q Consensus 10 qkv~LkV~-m~C~gCa~KIekaL~kIeGV~sV~Vdla~~kVtV~---g~idpeeII~aI~KaGf~Ael~~~~~ 78 (552)
.+++|+|. |+|..|+.+|+++|.++++|..++|++...+++|+ ..+++++|+++|+++||.+.++....
T Consensus 122 ~~~~l~v~Gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~~~ 194 (202)
T 2rop_A 122 STTLIAIAGMTCASCVHSIEGMISQLEGVQQISVSLAEGTATVLYNPAVISPEELRAAIEDMGFEASVVSESC 194 (202)
T ss_dssp EEEEEEESCCCSTHHHHHHHHHGGGSSSEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTSCEEEC----
T ss_pred eEEEEEECCccCHHHHHHHHHHHHcCCCeEEEEEEccCCEEEEEECCCCCCHHHHHHHHHHcCCceEEcCCCC
Confidence 45789999 99999999999999999999999999999999987 24688999999999999998876543
No 36
>1jk9_B CCS, copper chaperone for superoxide dismutase; protein-protein complex, heterodimer, metallochaperone, amyotrophic lateral sclerosis; 2.90A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1
Probab=98.51 E-value=1.6e-07 Score=93.59 Aligned_cols=70 Identities=29% Similarity=0.558 Sum_probs=63.2
Q ss_pred cEEEEEEecccHHHHHHHHHHHhcCCCeeEEEEecCCcEEEEEecCCHHHHHHHHHHcCCceEEcCCCCC
Q 008811 10 QSCVLRVNVDCDGCKQKVKKVLRKIDGVYSTNVDVEQGKVTVTGNVDPAILIKKLEKLGKHAELWGPQKG 79 (552)
Q Consensus 10 qkv~LkV~m~C~gCa~KIekaL~kIeGV~sV~Vdla~~kVtV~g~idpeeII~aI~KaGf~Ael~~~~~~ 79 (552)
.+++|+|+|+|..|+.+|+++|+++++|.+++|++...+++|+..+++++|+++|+++||.++++.....
T Consensus 7 ~~~~l~V~MtC~~Ca~~IekaL~~l~GV~~v~Vnl~~~~v~V~~~~~~~~I~~aIe~~Gy~a~~~~~~~~ 76 (249)
T 1jk9_B 7 YEATYAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLRNCGKDAIIRGAGKP 76 (249)
T ss_dssp EEEEEECCCCSSSHHHHHHHHHTTCTTEEEEEEETTTTEEEEEESSCHHHHHHHHHTTTCCCEEEEESST
T ss_pred eeEEEEEeeccHHHHHHHHHHHhccCCeeEEEEEcCCCeEEEecCCCHHHHHHHHHHhCCCcccccCCcc
Confidence 3567888899999999999999999999999999999999999778999999999999999988765544
No 37
>2aj0_A Probable cadmium-transporting ATPase; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta, metal binding protein, hydrolase; NMR {Listeria monocytogenes} PDB: 2aj1_A
Probab=98.49 E-value=2.3e-07 Score=71.96 Aligned_cols=60 Identities=32% Similarity=0.638 Sum_probs=51.1
Q ss_pred cEEEEEEe-cccHHHHHHHHHHHhcCCCeeEEEEecCCcEEEEEecCCHHHHHHHHHHcCCceEE
Q 008811 10 QSCVLRVN-VDCDGCKQKVKKVLRKIDGVYSTNVDVEQGKVTVTGNVDPAILIKKLEKLGKHAEL 73 (552)
Q Consensus 10 qkv~LkV~-m~C~gCa~KIekaL~kIeGV~sV~Vdla~~kVtV~g~idpeeII~aI~KaGf~Ael 73 (552)
.+++|.|. |+|..|+.+|+++|.++++|..++|++...+++|..... ++.|+++||.+.+
T Consensus 3 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~----~~~i~~~Gy~~~~ 63 (71)
T 2aj0_A 3 EKTVYRVDGLSCTNCAAKFERNVKEIEGVTEAIVNFGASKITVTGEAS----IQQVEQAGAFEHL 63 (71)
T ss_dssp CEEEEEEESCCCHHHHHHHHHHHHHSTTEEEEEECCSSEEEEEEESCC----HHHHHHHHTTTTC
T ss_pred eEEEEEECCcccHHHHHHHHHHHHcCCCeEEEEEECCCCEEEEEecCc----HHHHHHhCCCccc
Confidence 35679999 999999999999999999999999999999999985443 4577888887544
No 38
>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens}
Probab=98.44 E-value=4.9e-07 Score=79.40 Aligned_cols=67 Identities=25% Similarity=0.487 Sum_probs=59.7
Q ss_pred ccEEEEEEe-cccHHHHHHHHHHHhcCCCeeEEEEecCCcEEEEEe---cCCHHHHHHHHHHcCCceEEcC
Q 008811 9 LQSCVLRVN-VDCDGCKQKVKKVLRKIDGVYSTNVDVEQGKVTVTG---NVDPAILIKKLEKLGKHAELWG 75 (552)
Q Consensus 9 ~qkv~LkV~-m~C~gCa~KIekaL~kIeGV~sV~Vdla~~kVtV~g---~idpeeII~aI~KaGf~Ael~~ 75 (552)
+++++|+|. |+|.+|+.+|+++|.++++|..+.|++...+++|+. .+++++|+++|+++||.+.++.
T Consensus 3 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~~ 73 (149)
T 2ew9_A 3 PQKCFLQIKGMTCASCVSNIERNLQKEAGVLSVLVALMAGKAEIKYDPEVIQPLEIAQFIQDLGFEAAVME 73 (149)
T ss_dssp CEEEEEEEECCCSSSHHHHHHHHHHTTSSCCCEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTCEEEECS
T ss_pred cEEEEEEECCeecHHHHHHHHHHHhcCCCcEEEEEEecCCEEEEEEcCCCCCHHHHHHHHhcCCCceEeec
Confidence 567889999 999999999999999999999999999999998862 3678899999999999987654
No 39
>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens}
Probab=98.06 E-value=6.6e-06 Score=77.30 Aligned_cols=65 Identities=23% Similarity=0.426 Sum_probs=55.7
Q ss_pred ccEEEEEEe-cccHHHHHHHHHHHhcCCCeeEEEEecCCcEEEEEe---cCCHHHHHHHHHHc---CCceEE
Q 008811 9 LQSCVLRVN-VDCDGCKQKVKKVLRKIDGVYSTNVDVEQGKVTVTG---NVDPAILIKKLEKL---GKHAEL 73 (552)
Q Consensus 9 ~qkv~LkV~-m~C~gCa~KIekaL~kIeGV~sV~Vdla~~kVtV~g---~idpeeII~aI~Ka---Gf~Ael 73 (552)
+.+++|+|. |+|..|+.+|+++|.++++|..+.|++...+++|.. .++++.|+++|+++ +|.+.+
T Consensus 19 ~~~~~l~v~Gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~~~gg~~v~~ 90 (202)
T 2rop_A 19 VVTLQLRIDGMHCKSCVLNIEENIGQLLGVQSIQVSLENKTAQVKYDPSCTSPVALQRAIEALPPGNFKVSL 90 (202)
T ss_dssp -CEEEEEEESGGGSTHHHHHHHHTTSBTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHTTSSSSCSEEEC
T ss_pred cEEEEEEECCeEcHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHhccCCeEEEe
Confidence 456789999 999999999999999999999999999999999872 36788999999988 366543
No 40
>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A
Probab=98.06 E-value=1.2e-05 Score=71.02 Aligned_cols=63 Identities=29% Similarity=0.578 Sum_probs=55.4
Q ss_pred ccEEEEEEe-cccHHHHHHHHHHHhcCCCeeEEEEecCCcEEEEE---ecCCHHHHHHHHHHcCCce
Q 008811 9 LQSCVLRVN-VDCDGCKQKVKKVLRKIDGVYSTNVDVEQGKVTVT---GNVDPAILIKKLEKLGKHA 71 (552)
Q Consensus 9 ~qkv~LkV~-m~C~gCa~KIekaL~kIeGV~sV~Vdla~~kVtV~---g~idpeeII~aI~KaGf~A 71 (552)
+.+++|.|. |+|..|+.+|+++|.++++|..+.|++...+++|. ..++.+.|+++|++++|.+
T Consensus 5 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~ 71 (151)
T 1p6t_A 5 QKEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIEKLGYHV 71 (151)
T ss_dssp CEEEEEEEESCCSSHHHHHHHHHHTTSSSEEEEEEEGGGTEEEEEECTTTSCHHHHHHHHHHHTCEE
T ss_pred ceEEEEEECCCcCHHHHHHHHHHHhcCCCeeEEEEEccCCEEEEEEcCCcCCHHHHHHHHHHcCCcc
Confidence 346779999 99999999999999999999999999999998886 2357888999999999965
No 41
>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=97.98 E-value=1.4e-05 Score=90.17 Aligned_cols=65 Identities=17% Similarity=0.322 Sum_probs=58.8
Q ss_pred EEEEEEe-cccHHHHHHHHHHHhcCCCeeEEEEecCCcEEEEE---ecCCHHHHHHHHHHcCCceEEcC
Q 008811 11 SCVLRVN-VDCDGCKQKVKKVLRKIDGVYSTNVDVEQGKVTVT---GNVDPAILIKKLEKLGKHAELWG 75 (552)
Q Consensus 11 kv~LkV~-m~C~gCa~KIekaL~kIeGV~sV~Vdla~~kVtV~---g~idpeeII~aI~KaGf~Ael~~ 75 (552)
+++|+|+ |+|.+|+.+||++|++++||.+++||+.+++++|+ ..+++++|+++|+++||+++...
T Consensus 3 ~~~l~V~GM~Ca~Ca~~Ie~~L~~~~GV~~v~Vnl~~~~~~V~~d~~~~~~~~i~~ai~~~Gy~~~~~~ 71 (723)
T 3j09_A 3 ERTVRVTGMTCAMCVKSIETAVGSLEGVEEVRVNLATETAFIRFDEKRIDFETIKRVIEDLGYGVVDEQ 71 (723)
T ss_dssp CEEEEEETCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHHCCEESSCC
T ss_pred eEEEEeCCCCchHHHHHHHHHHhcCCCceEEEEEcCCCEEEEEeCCCcCCHHHHHHHHHhcCCcccccc
Confidence 5689999 99999999999999999999999999999999997 34789999999999999876543
No 42
>3cq1_A Putative uncharacterized protein TTHB138; DTDP-4-keto-L-rhamnose reductase, plasmid, oxidoreductase, structural genomics, NPPSFA; 1.90A {Thermus thermophilus} PDB: 2cu6_A 3cq2_A 3cq3_A*
Probab=71.45 E-value=3.7 Score=34.81 Aligned_cols=36 Identities=25% Similarity=0.540 Sum_probs=27.4
Q ss_pred EEEEEEecccHHH------HHHHHHHHhcCCCeeEEEEecCC
Q 008811 11 SCVLRVNVDCDGC------KQKVKKVLRKIDGVYSTNVDVEQ 46 (552)
Q Consensus 11 kv~LkV~m~C~gC------a~KIekaL~kIeGV~sV~Vdla~ 46 (552)
+++|.+.++|+.| ...|+.+|..+++|..|+|.+..
T Consensus 42 ~V~v~l~lt~~~cp~~~~l~~~i~~al~~l~gv~~V~V~l~~ 83 (103)
T 3cq1_A 42 RAYVRMTLTTPGCPLHDSLGEAVRQALSRLPGVEEVEVEVTF 83 (103)
T ss_dssp EEEEEECCSSSSCCSSCHHHHHHHHHHHTSTTCCEEEEEECC
T ss_pred EEEEEEEECCCCCcHHHHHHHHHHHHHHhCCCceeEEEEEec
Confidence 4566666666666 56789999999999988887544
No 43
>3bpd_A Uncharacterized protein; heptamer, Mg+2 ION, PSI-2, NYSGXRC, structural genom protein structure initiative; 2.80A {Archaeoglobus fulgidus dsm 4304} SCOP: d.58.61.1
Probab=70.12 E-value=15 Score=31.74 Aligned_cols=63 Identities=19% Similarity=0.204 Sum_probs=43.6
Q ss_pred ccEEEEEEe-cccHHHHHHHHHHHhcCCCeeEEEEe-----cCCcEE--EEE-ecCCHHHHHHHHHHcCCceE
Q 008811 9 LQSCVLRVN-VDCDGCKQKVKKVLRKIDGVYSTNVD-----VEQGKV--TVT-GNVDPAILIKKLEKLGKHAE 72 (552)
Q Consensus 9 ~qkv~LkV~-m~C~gCa~KIekaL~kIeGV~sV~Vd-----la~~kV--tV~-g~idpeeII~aI~KaGf~Ae 72 (552)
.+|++|.|- .+-+.-. .+.+.|.++++|..|++. ..+..+ +|+ ..++.++|.++|++.|-.+.
T Consensus 6 iRRlVLDVlKPh~P~iv-dlA~~l~~~~gV~gVnItV~EvD~eTe~lkItIEG~dIdfd~I~~~IE~~GgvIH 77 (100)
T 3bpd_A 6 LRRLVLDVLKPHEPKTI-VFALKLSELENVDGVNIHLSEIDQATENIKITILGNNLDYEQIKGVIEDMGGVIH 77 (100)
T ss_dssp EEEEEEEEEEESCSCHH-HHHHHHHTSTTEEEEEEEEEEECSSEEEEEEEEEEEEECHHHHHHHHHTTTCEEE
T ss_pred ceEEEEEecCCCCCCHH-HHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHHHHcCCeEE
Confidence 457777776 4555444 566778999998777654 333333 344 45999999999999986543
No 44
>2raq_A Conserved protein MTH889; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 3.11A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: d.58.61.1
Probab=69.43 E-value=20 Score=30.94 Aligned_cols=63 Identities=21% Similarity=0.275 Sum_probs=43.2
Q ss_pred ccEEEEEEe-cccHHHHHHHHHHHhcCCCeeEEEE-----ecCCcEEE--EE-ecCCHHHHHHHHHHcCCceE
Q 008811 9 LQSCVLRVN-VDCDGCKQKVKKVLRKIDGVYSTNV-----DVEQGKVT--VT-GNVDPAILIKKLEKLGKHAE 72 (552)
Q Consensus 9 ~qkv~LkV~-m~C~gCa~KIekaL~kIeGV~sV~V-----dla~~kVt--V~-g~idpeeII~aI~KaGf~Ae 72 (552)
.+|++|.|- .|-+.-. .+.+.|.++++|..|++ |..+..+. |+ ..++.++|.++|++.|-.++
T Consensus 6 irRlVLDVlKPh~p~i~-d~A~~l~~~~gV~gVnItv~EvD~eTe~lkitiEG~~id~d~I~~~IE~~Gg~IH 77 (97)
T 2raq_A 6 LIRIVLDILKPHEPIIP-EYAKYLSELRGVEGVNITLMEIDKETENIKVTIQGNDLDFDEITRAIESYGGSIH 77 (97)
T ss_dssp EEEEEEEEECCSCSCHH-HHHHHHHHSTTCCEEEEEEEEECSSCEEEEEEEECSSCCHHHHHHHHHHTTCEEE
T ss_pred ceEEEEEecCCCCCCHH-HHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHHHHcCCeEE
Confidence 467777777 4555444 55677888888766654 44444444 44 45999999999999986544
No 45
>1uwd_A Hypothetical protein TM0487; similar to PAAD protein, alpha/beta fold,structural genomics joint center for structural genomics, JCSG; NMR {Thermotoga maritima} SCOP: d.52.8.2 PDB: 1wcj_A
Probab=67.25 E-value=5 Score=33.93 Aligned_cols=36 Identities=17% Similarity=0.386 Sum_probs=26.1
Q ss_pred EEEEEEecccHHH------HHHHHHHHhcCCCeeEEEEecCC
Q 008811 11 SCVLRVNVDCDGC------KQKVKKVLRKIDGVYSTNVDVEQ 46 (552)
Q Consensus 11 kv~LkV~m~C~gC------a~KIekaL~kIeGV~sV~Vdla~ 46 (552)
+++|.+.++++.| ...|+++|..+++|..|+|.+..
T Consensus 43 ~V~v~l~lt~~~cp~~~~l~~~i~~al~~l~gv~~v~V~l~~ 84 (103)
T 1uwd_A 43 NVKVLMTMTTPMCPLAGMILSDAEEAIKKIEGVNNVEVELTF 84 (103)
T ss_dssp EEEEEECCSSSCCSSHHHHHHHHHHHHHTSSSCCEEEEEECC
T ss_pred EEEEEEEECCCCCcHHHHHHHHHHHHHHhCCCcceEEEEEec
Confidence 5566666555555 45688899999999988887543
No 46
>2x3d_A SSO6206; unknown function; 2.70A {Sulfolobus solfataricus}
Probab=66.47 E-value=24 Score=30.30 Aligned_cols=63 Identities=24% Similarity=0.288 Sum_probs=44.3
Q ss_pred ccEEEEEEe-c-ccHHHHHHHHHHHhcCCCeeEEEEec-----CCcEE--EEEe-cCCHHHHHHHHHHcCCceE
Q 008811 9 LQSCVLRVN-V-DCDGCKQKVKKVLRKIDGVYSTNVDV-----EQGKV--TVTG-NVDPAILIKKLEKLGKHAE 72 (552)
Q Consensus 9 ~qkv~LkV~-m-~C~gCa~KIekaL~kIeGV~sV~Vdl-----a~~kV--tV~g-~idpeeII~aI~KaGf~Ae 72 (552)
.+|++|.|- . |-+.-. .+.+.|.++++|..|++.. .+..+ +|++ .++.++|.++|++.|-.++
T Consensus 4 irRlVLDVlKP~h~P~iv-d~A~~l~~~~gV~gVnItv~EvD~eTe~lkItIEG~~idfd~I~~~IE~~Gg~IH 76 (96)
T 2x3d_A 4 IRRLVLDVLKPIRGTSIV-DLAERISKLDGVEGVNISVTDMDVETMGLMIIIEGTSLNFDDIRKMLEEEGCAIH 76 (96)
T ss_dssp EEEEEEEEEEESSSSCHH-HHHHHHHTSTTEEEEEEEEEEECSSEEEEEEEEEESSCCHHHHHHHHHHTTCEEE
T ss_pred eEEEEEEcccCCCCCCHH-HHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHHHHcCCeEE
Confidence 467778776 3 666554 5667789999987776543 33333 4444 4999999999999986544
No 47
>3lno_A Putative uncharacterized protein; alpha-beta fold, structural genomics, center for structural genomics of infectious diseases, csgid; 2.10A {Bacillus anthracis} SCOP: d.52.8.0
Probab=56.42 E-value=7.2 Score=33.42 Aligned_cols=37 Identities=30% Similarity=0.462 Sum_probs=26.8
Q ss_pred EEEEEEecccHHH------HHHHHHHH-hcCCCeeEEEEecCCc
Q 008811 11 SCVLRVNVDCDGC------KQKVKKVL-RKIDGVYSTNVDVEQG 47 (552)
Q Consensus 11 kv~LkV~m~C~gC------a~KIekaL-~kIeGV~sV~Vdla~~ 47 (552)
++.|.+.++++.| ...|+.+| ..+++|.+|+|.+...
T Consensus 45 ~V~V~ltlt~p~cp~~~~i~~~i~~al~~~l~Gv~~V~V~l~~~ 88 (108)
T 3lno_A 45 NAVITMTMTSIGCPMAGQIVSDVKKVLSTNVPEVNEIEVNVVWN 88 (108)
T ss_dssp CEEEEECCSCTTCTTHHHHHHHHHHHHHHHCTTCCCEEEEECCS
T ss_pred eEEEEEEECCCCCcHHHHHHHHHHHHHHHhCCCCceEEEEEEec
Confidence 4666666655555 55688888 8999998888766443
No 48
>2jsx_A Protein NAPD; TAT, proofreading, cytoplasm, chaperone; NMR {Escherichia coli K12} PDB: 2pq4_A
Probab=55.50 E-value=31 Score=29.18 Aligned_cols=47 Identities=19% Similarity=0.278 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHhcCCCeeEEEEecCCcEEEEE-ecCCHHHHHHHHHHc
Q 008811 21 DGCKQKVKKVLRKIDGVYSTNVDVEQGKVTVT-GNVDPAILIKKLEKL 67 (552)
Q Consensus 21 ~gCa~KIekaL~kIeGV~sV~Vdla~~kVtV~-g~idpeeII~aI~Ka 67 (552)
+.-...|.++|.++++|....++....++.|+ ...+.++|.+.|+++
T Consensus 16 p~~~~~V~~~L~~ipgvEi~~~~~~~GkiVV~iEa~~~~~l~~~i~~I 63 (95)
T 2jsx_A 16 SERISDISTQLNAFPGCEVAVSDAPSGQLIVVVEAEDSETLIQTIESV 63 (95)
T ss_dssp TTSHHHHHHHHTTSTTEEEEEEETTTTEEEEEEEESSHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHCCCCeEEEEecCCCCCEEEEEEeCCHHHHHHHHHHH
Confidence 55578999999999999655556556777665 444666666666544
No 49
>4gwb_A Peptide methionine sulfoxide reductase MSRA 3; structural genomics, protein structure initiative, nysgrc, R PSI-biology; 1.20A {Sinorhizobium meliloti}
Probab=53.85 E-value=23 Score=33.29 Aligned_cols=28 Identities=32% Similarity=0.596 Sum_probs=23.6
Q ss_pred HHHHHHHHHHHhcCCCeeEEEEecCCcE
Q 008811 21 DGCKQKVKKVLRKIDGVYSTNVDVEQGK 48 (552)
Q Consensus 21 ~gCa~KIekaL~kIeGV~sV~Vdla~~k 48 (552)
.+|-+-+|..+.+|+||.++.+-++.+.
T Consensus 9 gGCFWg~E~~f~~l~GV~~t~~GYagG~ 36 (168)
T 4gwb_A 9 GGCFWGMQDLIRKLPGVIETRVGYTGGD 36 (168)
T ss_dssp ESCHHHHHHHHTTSTTEEEEEEEEESSS
T ss_pred ccCccchHHHHhcCCCeEEEEEEcCCCc
Confidence 5777778999999999999998887763
No 50
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=52.03 E-value=43 Score=27.65 Aligned_cols=31 Identities=19% Similarity=0.318 Sum_probs=19.1
Q ss_pred EEEEEecccHHHHHHHHHHHhcCCCeeEEEEec
Q 008811 12 CVLRVNVDCDGCKQKVKKVLRKIDGVYSTNVDV 44 (552)
Q Consensus 12 v~LkV~m~C~gCa~KIekaL~kIeGV~sV~Vdl 44 (552)
+++...-.|+.|. ++++.|.+. +|....+|+
T Consensus 6 I~vYs~~~Cp~C~-~aK~~L~~~-gi~y~~idi 36 (92)
T 2lqo_A 6 LTIYTTSWCGYCL-RLKTALTAN-RIAYDEVDI 36 (92)
T ss_dssp EEEEECTTCSSHH-HHHHHHHHT-TCCCEEEET
T ss_pred EEEEcCCCCHhHH-HHHHHHHhc-CCceEEEEc
Confidence 3443346899998 577777764 565444443
No 51
>2nyt_A Probable C->U-editing enzyme apobec-2; cytidine deaminase, zinc-ION binding, hydrolase; 2.50A {Homo sapiens} PDB: 2rpz_A
Probab=51.34 E-value=22 Score=33.81 Aligned_cols=62 Identities=16% Similarity=0.186 Sum_probs=42.7
Q ss_pred EEEEEEec-ccHHHHHHHHHHHhcCCCeeEEEEecCCcEEEEEecCCHHHHHHHHHHcCCceEEcC
Q 008811 11 SCVLRVNV-DCDGCKQKVKKVLRKIDGVYSTNVDVEQGKVTVTGNVDPAILIKKLEKLGKHAELWG 75 (552)
Q Consensus 11 kv~LkV~m-~C~gCa~KIekaL~kIeGV~sV~Vdla~~kVtV~g~idpeeII~aI~KaGf~Ael~~ 75 (552)
.+++.|++ -|..|+..|-.+|.+.++|..|.+-...- ... .......++.|+++|.+++++.
T Consensus 84 g~TlYvTlePC~~Ca~aIi~al~~~~gI~rVV~~~~d~--~~~-~p~~~~g~~~L~~aGI~V~~~~ 146 (190)
T 2nyt_A 84 NVTWYVSSSPCAACADRIIKTLSKTKNLRLLILVGRLF--MWE-EPEIQAALKKLKEAGCKLRIMK 146 (190)
T ss_pred CeEEEEEcChHHHHHHHHHHhhhhcCCccEEEEEeecC--CcC-ChHHHHHHHHHHHCCCEEEEec
Confidence 56788884 79999999999999998987666532110 000 1112456788899999887654
No 52
>3lvj_C Sulfurtransferase TUSA; protein-protein complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PLP; 2.44A {Escherichia coli} SCOP: d.68.3.3 PDB: 3lvk_B* 1dcj_A
Probab=51.27 E-value=32 Score=27.85 Aligned_cols=56 Identities=9% Similarity=0.014 Sum_probs=39.4
Q ss_pred EEEEEEe-cccHHHHHHHHHHHhcCCCeeEEEEecCCcEEEEE--ecCCHHHHHHHHHHcCCceEEcC
Q 008811 11 SCVLRVN-VDCDGCKQKVKKVLRKIDGVYSTNVDVEQGKVTVT--GNVDPAILIKKLEKLGKHAELWG 75 (552)
Q Consensus 11 kv~LkV~-m~C~gCa~KIekaL~kIeGV~sV~Vdla~~kVtV~--g~idpeeII~aI~KaGf~Ael~~ 75 (552)
.++|.+. +.|+.-.-+++++|.+++-= ..++|. .....+.|.+.+++.|+.+....
T Consensus 10 ~~~lD~rGl~CP~Pvl~~kkal~~l~~G---------~~l~V~~dd~~a~~di~~~~~~~G~~~~~~~ 68 (82)
T 3lvj_C 10 DHTLDALGLRCPEPVMMVRKTVRNMQPG---------ETLLIIADDPATTRDIPGFCTFMEHELVAKE 68 (82)
T ss_dssp SEEEECTTCCTTHHHHHHHHHHHTSCTT---------CEEEEEECCTTHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEECCCCCCCHHHHHHHHHHHhCCCC---------CEEEEEECCccHHHHHHHHHHHCCCEEEEEE
Confidence 4456666 79999999999999987421 223332 23456778888899999876654
No 53
>1owx_A Lupus LA protein, SS-B, LA; RRM, transcription; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=46.99 E-value=34 Score=30.18 Aligned_cols=56 Identities=9% Similarity=0.113 Sum_probs=41.1
Q ss_pred EEEEEe-cccH-HHHHHHHHHHhcCCCeeEEEEecCCcEEEEEecCCHHHHHHHHHHc
Q 008811 12 CVLRVN-VDCD-GCKQKVKKVLRKIDGVYSTNVDVEQGKVTVTGNVDPAILIKKLEKL 67 (552)
Q Consensus 12 v~LkV~-m~C~-gCa~KIekaL~kIeGV~sV~Vdla~~kVtV~g~idpeeII~aI~Ka 67 (552)
++|+|. +... .+...|+.+++....|..|++.....+..|+-...+++...+|+++
T Consensus 19 ~il~v~~l~~~~~sredLke~F~~~G~V~~Vd~~~g~~tgfVrf~~~~~~A~~av~~l 76 (121)
T 1owx_A 19 CLLKFSGDLDDQTCREDLHILFSNHGEIKWIDFVRGAKEGIILFKEKAKEALGKAKDA 76 (121)
T ss_dssp CEEEEEESCCSSCCHHHHHHHTCSSCCEEEEECCTTCSEEEEEESSCHHHHHHHHHHT
T ss_pred eEEEEecCCCCcCCHHHHHHHHHhcCCEEEEEEecCCCEEEEEECCChHHHHHHHHHh
Confidence 567787 6555 7799999999999999999998877777777432244555566554
No 54
>1ff3_A Peptide methionine sulfoxide reductase; alpha beta roll, PMSR, MSRA, oxidoreductase; 1.90A {Escherichia coli} SCOP: d.58.28.1 PDB: 2gt3_A 2iem_A
Probab=44.64 E-value=32 Score=33.43 Aligned_cols=28 Identities=29% Similarity=0.407 Sum_probs=22.9
Q ss_pred HHHHHHHHHHHhcCCCeeEEEEecCCcE
Q 008811 21 DGCKQKVKKVLRKIDGVYSTNVDVEQGK 48 (552)
Q Consensus 21 ~gCa~KIekaL~kIeGV~sV~Vdla~~k 48 (552)
.+|-+-+|..+.+|+||.++.+-++.+.
T Consensus 49 gGCFWg~E~~F~~l~GV~~t~vGYaGG~ 76 (211)
T 1ff3_A 49 MGXFWGVERLFWQLPGVYSTAAGYTGGY 76 (211)
T ss_dssp CSSHHHHHHHHHTSTTEEEEEEEEESSS
T ss_pred cCCeEEehhhHhcCCCeEEEEeeecCCC
Confidence 5677777888999999999998877653
No 55
>1nwa_A Peptide methionine sulfoxide reductase MSRA; oxidoreductase, product complex, structural genomics, PSI, protein structure initiative; 1.50A {Mycobacterium tuberculosis} SCOP: d.58.28.1
Probab=41.36 E-value=42 Score=32.45 Aligned_cols=28 Identities=32% Similarity=0.540 Sum_probs=22.9
Q ss_pred HHHHHHHHHHHhcCCCeeEEEEecCCcE
Q 008811 21 DGCKQKVKKVLRKIDGVYSTNVDVEQGK 48 (552)
Q Consensus 21 ~gCa~KIekaL~kIeGV~sV~Vdla~~k 48 (552)
.+|-+-+|..+.+|+||.++.|-++.+.
T Consensus 32 gGCFWg~E~~F~~l~GV~~t~vGYaGG~ 59 (203)
T 1nwa_A 32 GGCFWGLQDLIRNQPGVVSTRVGYSGGN 59 (203)
T ss_dssp ESCHHHHHHHHTTSTTEEEEEEEEESSS
T ss_pred cCCeeeeHHHHhcCCCeEEEEeeecCCC
Confidence 5666667888999999999998887764
No 56
>1ayz_A UBC2, ubiquitin-conjugating enzyme RAD6; ubiquitin conjugation; 2.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=41.22 E-value=6.1 Score=36.68 Aligned_cols=10 Identities=0% Similarity=0.208 Sum_probs=4.4
Q ss_pred HHHHHHhhcc
Q 008811 88 LLNNQFKNMM 97 (552)
Q Consensus 88 ~l~~q~k~l~ 97 (552)
++...++.|.
T Consensus 104 ~vL~si~~ll 113 (169)
T 1ayz_A 104 SILTSIQSLF 113 (169)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 3444444444
No 57
>1fvg_A Peptide methionine sulfoxide reductase; oxidoreductase; 1.60A {Bos taurus} SCOP: d.58.28.1 PDB: 1fva_A 2l90_A*
Probab=40.86 E-value=40 Score=32.44 Aligned_cols=28 Identities=32% Similarity=0.529 Sum_probs=22.8
Q ss_pred HHHHHHHHHHHhcCCCeeEEEEecCCcE
Q 008811 21 DGCKQKVKKVLRKIDGVYSTNVDVEQGK 48 (552)
Q Consensus 21 ~gCa~KIekaL~kIeGV~sV~Vdla~~k 48 (552)
.+|-+-+|..+.+|+||.++.+-++.+.
T Consensus 50 gGCFWg~E~~F~~l~GV~~t~vGYagG~ 77 (199)
T 1fvg_A 50 MGCFWGAERKFWTLKGVYSTQVGFAGGY 77 (199)
T ss_dssp ESSHHHHHHHHHTSTTEEEEEEEEESSS
T ss_pred cCCeeeeHHHHhhCCCeEEEEeeccCCC
Confidence 5666777888999999999998877663
No 58
>2byk_A Chrac-16; nucleosome sliding, histone fold, DNA-binding protein; 2.4A {Drosophila melanogaster} SCOP: a.22.1.3 PDB: 2bym_A
Probab=40.03 E-value=6 Score=36.06 Aligned_cols=11 Identities=9% Similarity=0.395 Sum_probs=2.0
Q ss_pred HHHHHHHhcCC
Q 008811 25 QKVKKVLRKID 35 (552)
Q Consensus 25 ~KIekaL~kIe 35 (552)
.+|++++..-+
T Consensus 23 aRIKrIMK~dp 33 (140)
T 2byk_A 23 SRVRTIMKSSM 33 (140)
T ss_dssp ------CCSSS
T ss_pred HHHHHHHhcCc
Confidence 34444444433
No 59
>2kmw_A Uncharacterized protein AT3G03773; protein structure initiative, center for eukaryotic structural genomics, CESG, structural genomics; NMR {Arabidopsis thaliana}
Probab=38.37 E-value=27 Score=31.78 Aligned_cols=17 Identities=24% Similarity=0.339 Sum_probs=10.5
Q ss_pred eeEEEEecC-CcEEEEEe
Q 008811 37 VYSTNVDVE-QGKVTVTG 53 (552)
Q Consensus 37 V~sV~Vdla-~~kVtV~g 53 (552)
|..+.|++. ...|+|..
T Consensus 25 ~~~v~V~~~~~~~l~~~~ 42 (150)
T 2kmw_A 25 AKDISVKCEPQGLFSFSA 42 (150)
T ss_dssp EEEEEECCCTTEEEEEEE
T ss_pred CCceEEEEecCCEEEEEE
Confidence 456677776 56666653
No 60
>1ayz_A UBC2, ubiquitin-conjugating enzyme RAD6; ubiquitin conjugation; 2.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=37.67 E-value=7.3 Score=36.17 Aligned_cols=11 Identities=0% Similarity=0.455 Sum_probs=5.1
Q ss_pred HHHHHHHHHhc
Q 008811 23 CKQKVKKVLRK 33 (552)
Q Consensus 23 Ca~KIekaL~k 33 (552)
+..+|.+.|..
T Consensus 5 a~~RL~kEl~~ 15 (169)
T 1ayz_A 5 ARRRLMRDFKR 15 (169)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 34455544443
No 61
>3bqh_A PILB, peptide methionine sulfoxide reductase MSRA/MSRB; methionine sulfoxide reductase A, oxidized form, elect transport; 1.95A {Neisseria meningitidis} PDB: 3bqe_A 3bqf_A* 3bqg_A
Probab=36.23 E-value=49 Score=31.67 Aligned_cols=28 Identities=25% Similarity=0.494 Sum_probs=22.6
Q ss_pred HHHHHHHHHHHhcCCCeeEEEEecCCcE
Q 008811 21 DGCKQKVKKVLRKIDGVYSTNVDVEQGK 48 (552)
Q Consensus 21 ~gCa~KIekaL~kIeGV~sV~Vdla~~k 48 (552)
.+|-+-+|..+.+|+||.++.+-++.+.
T Consensus 9 gGCFWg~E~~F~~~~GV~~t~vGYagG~ 36 (193)
T 3bqh_A 9 GGCFWGLEAYFQRIDGVVDAVSGYANGN 36 (193)
T ss_dssp ESCHHHHHHHHHTSTTEEEEEEEEESCS
T ss_pred cCCeeehHHHHhcCCCEEEEEEeccCCc
Confidence 5666777888999999999998876653
No 62
>3tj1_A RNA polymerase I-specific transcription initiatio RRN3; heat repeat, transcription factor, nucleus; 2.85A {Saccharomyces cerevisiae}
Probab=35.86 E-value=7.7 Score=43.54 Aligned_cols=7 Identities=43% Similarity=0.525 Sum_probs=3.1
Q ss_pred HHHHHhc
Q 008811 27 VKKVLRK 33 (552)
Q Consensus 27 IekaL~k 33 (552)
|+++|.+
T Consensus 78 V~~AL~~ 84 (649)
T 3tj1_A 78 VKSALDD 84 (649)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 4444443
No 63
>1jdq_A TM006 protein, hypothetical protein TM0983; structural genomics; NMR {Thermotoga maritima} SCOP: d.68.3.3
Probab=32.89 E-value=79 Score=26.63 Aligned_cols=55 Identities=16% Similarity=0.117 Sum_probs=39.2
Q ss_pred EEEEEe-cccHHHHHHHHHHHhcCCCeeEEEEecCCcEEEEE--ecCCHHHHHHHHHHcCCceEEcC
Q 008811 12 CVLRVN-VDCDGCKQKVKKVLRKIDGVYSTNVDVEQGKVTVT--GNVDPAILIKKLEKLGKHAELWG 75 (552)
Q Consensus 12 v~LkV~-m~C~gCa~KIekaL~kIeGV~sV~Vdla~~kVtV~--g~idpeeII~aI~KaGf~Ael~~ 75 (552)
.+|.+. +.|+.-.-+++++|.+++-= ..++|. .....+.|.+.+++.|+.+....
T Consensus 27 ~~LD~rGl~CP~Pvl~tkkaL~~l~~G---------e~L~Vl~dd~~a~~dI~~~~~~~G~~v~~~e 84 (98)
T 1jdq_A 27 KTLDVRGEVCPVPDVETKRALQNMKPG---------EILEVWIDYPMSKERIPETVKKLGHEVLEIE 84 (98)
T ss_dssp EEEECSSCCSSHHHHHHHHHHHTCCTT---------CEEEEEESSCTHHHHHHHHHHHSSCCEEEEE
T ss_pred EEEeCCCCCCCHHHHHHHHHHHhCCCC---------CEEEEEECCccHHHHHHHHHHHCCCEEEEEE
Confidence 456666 69999999999999997431 223333 23456788888999999876654
No 64
>3v4k_A DNA DC->DU-editing enzyme apobec-3G; antiviral defense, HOST-virus interaction, hydrola metal-binding, nucleus; HET: DNA; 1.38A {Homo sapiens} PDB: 3v4j_A* 3ir2_A* 2kem_A* 2jyw_A* 2kbo_A* 3e1u_A* 3iqs_A*
Probab=32.59 E-value=1.1e+02 Score=29.48 Aligned_cols=53 Identities=15% Similarity=0.223 Sum_probs=32.3
Q ss_pred cccHHHHHHHHHHHhcCCCeeEEEEecCCcEEEEEecCCHHHHHHHHHHcCCceEEc
Q 008811 18 VDCDGCKQKVKKVLRKIDGVYSTNVDVEQGKVTVTGNVDPAILIKKLEKLGKHAELW 74 (552)
Q Consensus 18 m~C~gCa~KIekaL~kIeGV~sV~Vdla~~kVtV~g~idpeeII~aI~KaGf~Ael~ 74 (552)
--|..|+.+|.+-|...+.|. ++|-+ .++--. ....++-+..|.++|..+.+-
T Consensus 109 SPC~~CA~~v~~FL~~~~~v~-L~If~--aRLY~~-~~~~~~gLr~L~~aG~~v~iM 161 (203)
T 3v4k_A 109 SPCFSCAQEMAKFISKNKHVS-LCIKT--ARIYDD-QGRCQEGLRTLAEAGAKISIM 161 (203)
T ss_pred CChHHHHHHHHHHHhhCCCeE-EEEEE--Eeeccc-CchHHHHHHHHHHCCCeEEec
Confidence 379999999999999988773 33322 122111 223344455666777666653
No 65
>2j89_A Methionine sulfoxide reductase A; MSRA, poplar, oxidoreductase; 1.7A {Populus trichocarpa}
Probab=30.61 E-value=70 Score=32.01 Aligned_cols=28 Identities=32% Similarity=0.513 Sum_probs=23.2
Q ss_pred HHHHHHHHHHHhcCCCeeEEEEecCCcE
Q 008811 21 DGCKQKVKKVLRKIDGVYSTNVDVEQGK 48 (552)
Q Consensus 21 ~gCa~KIekaL~kIeGV~sV~Vdla~~k 48 (552)
.+|-+-+|+.+.+++||.++.|-++.+.
T Consensus 101 gGCFWgvE~~F~~l~GV~~t~vGYaGG~ 128 (261)
T 2j89_A 101 AGCFWGVELAFQRVPGVTKTEVGYTQGL 128 (261)
T ss_dssp ESSHHHHHHHHHTSTTEEEEEEEEESSS
T ss_pred cCCeeeeHHHHhhCCCeEEEEeeecCCC
Confidence 5677778888999999999998877663
No 66
>3e0m_A Peptide methionine sulfoxide reductase MSRA/MSRB 1; fusion, msrab, linker, hinge, cell membrane, membrane, multifunctional enzyme, oxidoreductase; 2.40A {Streptococcus pneumoniae}
Probab=29.87 E-value=68 Score=32.93 Aligned_cols=28 Identities=29% Similarity=0.572 Sum_probs=23.6
Q ss_pred HHHHHHHHHHHhcCCCeeEEEEecCCcE
Q 008811 21 DGCKQKVKKVLRKIDGVYSTNVDVEQGK 48 (552)
Q Consensus 21 ~gCa~KIekaL~kIeGV~sV~Vdla~~k 48 (552)
.+|-+-||..+.+|+||.+|.+-++.+.
T Consensus 9 gGCFWg~E~~F~~l~GV~~t~~GYagG~ 36 (313)
T 3e0m_A 9 GGCFWGLEEYFSRISGVLETSVGYANGQ 36 (313)
T ss_dssp CSCHHHHHHHHTTSTTEEEEEEEEESCS
T ss_pred cCCchhhHHHHhhCCCeEEeecccCCCC
Confidence 5777778999999999999998877664
No 67
>1qb3_A Cyclin-dependent kinases regulatory subunit; cell cycle mutagenesis domain swapping, cyclin-dependent KIN cycle; 3.00A {Saccharomyces cerevisiae} SCOP: d.97.1.1
Probab=28.56 E-value=11 Score=34.68 Aligned_cols=20 Identities=10% Similarity=0.072 Sum_probs=10.5
Q ss_pred EEEEEecCCHHHHHHHHHHc
Q 008811 48 KVTVTGNVDPAILIKKLEKL 67 (552)
Q Consensus 48 kVtV~g~idpeeII~aI~Ka 67 (552)
+.+..-++-+.+|+..|.+.
T Consensus 38 ~YEYRHViLPke~~k~iPk~ 57 (150)
T 1qb3_A 38 NYEYRHVMLPKAMLKVIPSD 57 (150)
T ss_dssp SEEEEEEECCHHHHHTSCGG
T ss_pred ceeEEEEecCHHHHhhcccc
Confidence 34433344456666666554
No 68
>3rdw_A Putative arsenate reductase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 2.20A {Yersinia pestis}
Probab=28.29 E-value=58 Score=28.15 Aligned_cols=51 Identities=18% Similarity=0.221 Sum_probs=32.5
Q ss_pred EEEEecccHHHHHHHHHHHhcCCCeeEEEEecCCcEEEEEecCCHHHHHHHHHHcCC-ce
Q 008811 13 VLRVNVDCDGCKQKVKKVLRKIDGVYSTNVDVEQGKVTVTGNVDPAILIKKLEKLGK-HA 71 (552)
Q Consensus 13 ~LkV~m~C~gCa~KIekaL~kIeGV~sV~Vdla~~kVtV~g~idpeeII~aI~KaGf-~A 71 (552)
+|...-.|+.|. ++++.|.. .+|....+++.. ...+.++|.+.+++++. .+
T Consensus 8 ~iY~~p~C~~c~-ka~~~L~~-~gi~~~~~di~~------~~~~~~eL~~~l~~~g~~~~ 59 (121)
T 3rdw_A 8 TIYHNPRCSKSR-ETLALVEQ-QGITPQVVLYLE------TPPSVDKLKELLQQLGFSDA 59 (121)
T ss_dssp EEECCTTCHHHH-HHHHHHHT-TTCCCEEECTTT------SCCCHHHHHHHHHHTTCSSG
T ss_pred EEEECCCCHHHH-HHHHHHHH-cCCCcEEEeecc------CCCcHHHHHHHHHhcCCcCH
Confidence 333336899998 55566664 355444444433 33578889999999987 54
No 69
>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A
Probab=26.87 E-value=48 Score=26.52 Aligned_cols=33 Identities=12% Similarity=0.097 Sum_probs=21.3
Q ss_pred EEEEEEecccHHHH-----HHHHHHHhcCCCeeEEEEec
Q 008811 11 SCVLRVNVDCDGCK-----QKVKKVLRKIDGVYSTNVDV 44 (552)
Q Consensus 11 kv~LkV~m~C~gCa-----~KIekaL~kIeGV~sV~Vdl 44 (552)
+++|...-.|+.|. .++++.|... +|.-..+++
T Consensus 3 ~v~ly~~~~C~~c~~~~~~~~ak~~L~~~-~i~~~~~di 40 (93)
T 1t1v_A 3 GLRVYSTSVTGSREIKSQQSEVTRILDGK-RIQYQLVDI 40 (93)
T ss_dssp CEEEEECSSCSCHHHHHHHHHHHHHHHHT-TCCCEEEET
T ss_pred CEEEEEcCCCCCchhhHHHHHHHHHHHHC-CCceEEEEC
Confidence 44444456899996 7888888865 454333433
No 70
>2iu1_A EIF5, eukaryotic translation initiation factor 5; MFC, GTP-binding, phosphorylation, protein biosynthesis, translation inititation; 1.8A {Homo sapiens}
Probab=25.78 E-value=19 Score=34.66 Aligned_cols=29 Identities=17% Similarity=0.322 Sum_probs=0.0
Q ss_pred CCCCCCCCCCCCCCCCCCC---------------CCCCCccccC
Q 008811 188 DDFDDEEFDDDFDEDDFDD---------------YDDEDDEEFG 216 (552)
Q Consensus 188 ~~~~dd~~ddd~ddddddd---------------ddd~ddd~~d 216 (552)
+.|+++++++|+|+|++++ ..+++||++|
T Consensus 153 EAEEEs~eeeeeeed~~~e~~~~~~~~~~~~~~~~~~~~~~d~d 196 (208)
T 2iu1_A 153 EAEEESSGGEEEDEDENIEVVYSKLESVPKVETVKSDNKDDDID 196 (208)
T ss_dssp CSSCCCCCCCCCCCSCHHHHHHHHHC------------------
T ss_pred ccccccccccccccccccceeccCccCCCccccccccccccccc
No 71
>3fz4_A Putative arsenate reductase; APC61768, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.38A {Streptococcus mutans UA159} SCOP: c.47.1.0
Probab=24.77 E-value=1.1e+02 Score=26.28 Aligned_cols=51 Identities=16% Similarity=0.274 Sum_probs=32.0
Q ss_pred EEEecccHHHHHHHHHHHhcCCCeeEEEEecCCcEEEEEecCCHHHHHHHHHHcCCceE
Q 008811 14 LRVNVDCDGCKQKVKKVLRKIDGVYSTNVDVEQGKVTVTGNVDPAILIKKLEKLGKHAE 72 (552)
Q Consensus 14 LkV~m~C~gCa~KIekaL~kIeGV~sV~Vdla~~kVtV~g~idpeeII~aI~KaGf~Ae 72 (552)
|...-.|+.|. ++++.|.. .+|.-..+++.. ...+.++|.+.+++++..++
T Consensus 7 iY~~~~C~~c~-ka~~~L~~-~gi~~~~~di~~------~~~~~~eL~~~l~~~g~~~~ 57 (120)
T 3fz4_A 7 FYEYPKCSTCR-RAKAELDD-LAWDYDAIDIKK------NPPAASLIRNWLENSGLELK 57 (120)
T ss_dssp EEECSSCHHHH-HHHHHHHH-HTCCEEEEETTT------SCCCHHHHHHHHHHSCCCGG
T ss_pred EEeCCCChHHH-HHHHHHHH-cCCceEEEEecc------CchhHHHHHHHHHHcCCCHH
Confidence 33336899998 45555554 355444444433 33578889999999986543
No 72
>2kmw_A Uncharacterized protein AT3G03773; protein structure initiative, center for eukaryotic structural genomics, CESG, structural genomics; NMR {Arabidopsis thaliana}
Probab=23.40 E-value=67 Score=29.10 Aligned_cols=7 Identities=29% Similarity=0.378 Sum_probs=3.3
Q ss_pred CCCCCCC
Q 008811 182 KFNTIED 188 (552)
Q Consensus 182 k~~~~~~ 188 (552)
.|+.-.+
T Consensus 102 Dwdkw~d 108 (150)
T 2kmw_A 102 DWNKWCD 108 (150)
T ss_dssp CSSSSCC
T ss_pred cchhcCC
Confidence 4555443
No 73
>3l4n_A Monothiol glutaredoxin-6; C-terminal domain of GRX6, oxidoreductase; HET: GSH; 1.50A {Saccharomyces cerevisiae}
Probab=23.39 E-value=78 Score=27.62 Aligned_cols=26 Identities=19% Similarity=0.335 Sum_probs=18.0
Q ss_pred CccEEEEEEecccHHHHHHHHHHHhcC
Q 008811 8 KLQSCVLRVNVDCDGCKQKVKKVLRKI 34 (552)
Q Consensus 8 ~~qkv~LkV~m~C~gCa~KIekaL~kI 34 (552)
.+.++++...-.|+.|. ++++.|.+.
T Consensus 12 ~~~~Vvvysk~~Cp~C~-~ak~lL~~~ 37 (127)
T 3l4n_A 12 DLSPIIIFSKSTCSYSK-GMKELLENE 37 (127)
T ss_dssp TSCSEEEEECTTCHHHH-HHHHHHHHH
T ss_pred ccCCEEEEEcCCCccHH-HHHHHHHHh
Confidence 44556655557899998 677777763
No 74
>2qn6_B Translation initiation factor 2 alpha subunit; initiation of translation, GTP-binding, nucleotide-binding, protein biosynthesis; HET: GDP; 2.15A {Sulfolobus solfataricus} SCOP: d.58.51.1 PDB: 2qmu_B* 3qsy_B*
Probab=23.03 E-value=95 Score=26.18 Aligned_cols=24 Identities=21% Similarity=0.213 Sum_probs=17.3
Q ss_pred EEEEEEecccHHH--HHHHHHHHhcC
Q 008811 11 SCVLRVNVDCDGC--KQKVKKVLRKI 34 (552)
Q Consensus 11 kv~LkV~m~C~gC--a~KIekaL~kI 34 (552)
+++..|+++|..+ ..+|+++|.+.
T Consensus 5 kIra~iel~c~~~dGIe~IK~AL~~a 30 (93)
T 2qn6_B 5 KMSGLITVRTNEPLGVEKIKEVISKA 30 (93)
T ss_dssp EEEEEEEEEECCTTTHHHHHHHHHHH
T ss_pred EEEEEEEEEeCCCchHHHHHHHHHHH
Confidence 4556666788665 88999999654
No 75
>3gkx_A Putative ARSC family related protein; ARSC family protein, structural genomi 2, protein structure initiative; 2.20A {Bacteroides fragilis} SCOP: c.47.1.0
Probab=23.03 E-value=88 Score=26.93 Aligned_cols=51 Identities=22% Similarity=0.205 Sum_probs=32.0
Q ss_pred EEEEecccHHHHHHHHHHHhcCCCeeEEEEecCCcEEEEEecCCHHHHHHHHHHcCCce
Q 008811 13 VLRVNVDCDGCKQKVKKVLRKIDGVYSTNVDVEQGKVTVTGNVDPAILIKKLEKLGKHA 71 (552)
Q Consensus 13 ~LkV~m~C~gCa~KIekaL~kIeGV~sV~Vdla~~kVtV~g~idpeeII~aI~KaGf~A 71 (552)
+|...-.|+.|. ++++.|.. .+|....+++.. ...+.++|.+.+++++..+
T Consensus 7 ~iY~~p~C~~c~-ka~~~L~~-~gi~~~~~di~~------~~~~~~eL~~~l~~~g~~~ 57 (120)
T 3gkx_A 7 LFLQYPACSTCQ-KAKKWLIE-NNIEYTNRLIVD------DNPTVEELKAWIPLSGLPV 57 (120)
T ss_dssp EEEECTTCHHHH-HHHHHHHH-TTCCCEEEETTT------TCCCHHHHHHHHHHHTSCG
T ss_pred EEEECCCChHHH-HHHHHHHH-cCCceEEEeccc------CcCCHHHHHHHHHHcCCCH
Confidence 333346899998 55555654 355444444332 3357888999999888653
No 76
>2f06_A Conserved hypothetical protein; structural genomics hypothetical protein, PSI, protein struc initiative; HET: MSE HIS; 2.10A {Bacteroides thetaiotaomicron} SCOP: d.58.18.11 d.58.18.11
Probab=21.53 E-value=3.2e+02 Score=23.33 Aligned_cols=58 Identities=12% Similarity=0.029 Sum_probs=32.9
Q ss_pred EEEec-ccHHHHHHHHHHHhcCCC-eeEEEEecCCcEEEEE-ecCCHHHHHHHHHHcCCce
Q 008811 14 LRVNV-DCDGCKQKVKKVLRKIDG-VYSTNVDVEQGKVTVT-GNVDPAILIKKLEKLGKHA 71 (552)
Q Consensus 14 LkV~m-~C~gCa~KIekaL~kIeG-V~sV~Vdla~~kVtV~-g~idpeeII~aI~KaGf~A 71 (552)
+-|.+ ..++...+|-++|.+..- |..+.+.....++++. ...+.++.+++|+++||++
T Consensus 75 v~v~~~d~pGvla~i~~~L~~~~InI~~~~~~~~~~~~~~~i~~~d~~~A~~~L~~~g~~v 135 (144)
T 2f06_A 75 VGISCPNVPGALAKVLGFLSAEGVFIEYMYSFANNNVANVVIRPSNMDKCIEVLKEKKVDL 135 (144)
T ss_dssp EEEEEESSTTHHHHHHHHHHHTTCCEEEEEEEEETTEEEEEEEESCHHHHHHHHHHTTCEE
T ss_pred EEEEeCCCCcHHHHHHHHHHHCCCCEEEEEEEccCCcEEEEEEeCCHHHHHHHHHHcCCEE
Confidence 33443 677788888887765422 2121111023333332 3347888888888888875
No 77
>1xhj_A Nitrogen fixation protein NIFU; alpha-beta, NIFU-like, structural genomics, protein structur initiative, NESG, PSI; NMR {Staphylococcus epidermidis} SCOP: d.52.8.1
Probab=21.32 E-value=83 Score=26.36 Aligned_cols=31 Identities=19% Similarity=0.508 Sum_probs=19.0
Q ss_pred EEEEEEecccHHHH-------HHHHHHHh-cCCCeeEEE
Q 008811 11 SCVLRVNVDCDGCK-------QKVKKVLR-KIDGVYSTN 41 (552)
Q Consensus 11 kv~LkV~m~C~gCa-------~KIekaL~-kIeGV~sV~ 41 (552)
++.+++...|.+|. .-||+.|. .++.|..|.
T Consensus 39 ~V~V~L~GaC~gCpss~~TLk~gIE~~L~~~vPev~~V~ 77 (88)
T 1xhj_A 39 IVKLQLHGACGTCPSSTITLKAGIERALHEEVPGVIEVE 77 (88)
T ss_dssp EEEEEEESSCCSSCHHHHHHHHHHHHHHHHHSTTCCEEE
T ss_pred EEEEEEeecCCCCcchHHHHHHHHHHHHHHhCCCceEEE
Confidence 45666667888883 34555554 466766554
No 78
>2ct6_A SH3 domain-binding glutamic acid-rich-like protein 2; SH3BGRL2,FASH3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=20.96 E-value=91 Score=26.04 Aligned_cols=33 Identities=12% Similarity=0.045 Sum_probs=21.8
Q ss_pred EEEEEEecccHHHHH-----HHHHHHhcCCCeeEEEEec
Q 008811 11 SCVLRVNVDCDGCKQ-----KVKKVLRKIDGVYSTNVDV 44 (552)
Q Consensus 11 kv~LkV~m~C~gCa~-----KIekaL~kIeGV~sV~Vdl 44 (552)
+++|...-.|+.|.. ++++.|..+ +|....||+
T Consensus 9 ~V~vy~~~~C~~C~~~~~~~~ak~~L~~~-gi~y~~vdI 46 (111)
T 2ct6_A 9 VIRVFIASSSGFVAIKKKQQDVVRFLEAN-KIEFEEVDI 46 (111)
T ss_dssp CEEEEECSSCSCHHHHHHHHHHHHHHHHT-TCCEEEEET
T ss_pred EEEEEEcCCCCCcccchhHHHHHHHHHHc-CCCEEEEEC
Confidence 344444468999997 888888875 454444443
No 79
>3hz7_A Uncharacterized protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.00A {Desulfitobacterium hafniense}
Probab=20.66 E-value=1.1e+02 Score=25.13 Aligned_cols=52 Identities=27% Similarity=0.324 Sum_probs=37.1
Q ss_pred EEEe-cccHHHHHHHHHHHhcCC--CeeEEEEecCCcEEEEE--ecCCHHHHHHHHHHcCCceEEcC
Q 008811 14 LRVN-VDCDGCKQKVKKVLRKID--GVYSTNVDVEQGKVTVT--GNVDPAILIKKLEKLGKHAELWG 75 (552)
Q Consensus 14 LkV~-m~C~gCa~KIekaL~kIe--GV~sV~Vdla~~kVtV~--g~idpeeII~aI~KaGf~Ael~~ 75 (552)
|.+. +.|+.-.-+++++|.+++ | ..++|. .....+.|.+.+++.|+.+....
T Consensus 4 lD~rGl~CP~Pvl~~kkal~~l~~~G----------~~L~V~~dd~~a~~dI~~~~~~~G~~v~~~~ 60 (87)
T 3hz7_A 4 IDALGQVCPIPVIRAKKALAELGEAG----------GVVTVLVDNDISRQNLQKMAEGMGYQSEYLE 60 (87)
T ss_dssp EECTTCCTTHHHHHHHHHHHTTGGGC----------CEEEEEESSHHHHHHHHHHHHHHTCEEEEEE
T ss_pred EEcCCCCCCHHHHHHHHHHHhccCCC----------CEEEEEECCccHHHHHHHHHHHCCCEEEEEE
Confidence 4555 689999999999999873 3 223333 23456778888899999876554
No 80
>1aba_A Glutaredoxin; electron transport; HET: MES; 1.45A {Enterobacteria phage T4} SCOP: c.47.1.1 PDB: 1aaz_A 1de1_A 1de2_A
Probab=20.65 E-value=2.5e+02 Score=21.71 Aligned_cols=24 Identities=17% Similarity=0.387 Sum_probs=15.7
Q ss_pred ccHHHHHHHHHHHhcCCCeeEEEEec
Q 008811 19 DCDGCKQKVKKVLRKIDGVYSTNVDV 44 (552)
Q Consensus 19 ~C~gCa~KIekaL~kIeGV~sV~Vdl 44 (552)
.|+.|. ++++.|..+ +|....+++
T Consensus 13 ~Cp~C~-~ak~~L~~~-gi~y~~idI 36 (87)
T 1aba_A 13 KCGPCD-NAKRLLTVK-KQPFEFINI 36 (87)
T ss_dssp CCHHHH-HHHHHHHHT-TCCEEEEES
T ss_pred cCccHH-HHHHHHHHc-CCCEEEEEe
Confidence 899997 577777764 454444443
No 81
>1s3c_A Arsenate reductase; ARSC, arsenite, oxidoreductase; 1.25A {Escherichia coli} PDB: 1sd9_A 1i9d_A 1j9b_A 1sd8_A 1jzw_A* 1sk1_A* 1sjz_A* 1sk0_A* 1sk2_A 1s3d_A
Probab=20.27 E-value=97 Score=27.52 Aligned_cols=46 Identities=13% Similarity=0.176 Sum_probs=30.3
Q ss_pred cccHHHHHHHHHHHhcCCCeeEEEEecCCcEEEEEecCCHHHHHHHHHHcCCce
Q 008811 18 VDCDGCKQKVKKVLRKIDGVYSTNVDVEQGKVTVTGNVDPAILIKKLEKLGKHA 71 (552)
Q Consensus 18 m~C~gCa~KIekaL~kIeGV~sV~Vdla~~kVtV~g~idpeeII~aI~KaGf~A 71 (552)
-.|+.|. ++++.|.. .+|....+++.. ...+.++|.+.+.+++..+
T Consensus 10 p~C~~cr-kak~~L~~-~gi~~~~idi~~------~~~~~~eL~~~~~~~g~p~ 55 (141)
T 1s3c_A 10 PASGTSR-NTLEMIRN-SGTEPTIILYLE------NPPSRDELVKLIADMGISV 55 (141)
T ss_dssp TTCHHHH-HHHHHHHH-TTCCCEEECTTT------SCCCHHHHHHHHHHHTSCH
T ss_pred CCChHHH-HHHHHHHH-cCCCEEEEECCC------CCccHHHHHHHhcccCCCH
Confidence 5899997 56666665 456544444433 2356788888888888753
No 82
>3l78_A Regulatory protein SPX; transcription, transcriptional factor, disulfide bond, redox-active center, transcription regulati; 1.90A {Streptococcus mutans} SCOP: c.47.1.12
Probab=20.24 E-value=1.8e+02 Score=24.75 Aligned_cols=47 Identities=17% Similarity=0.293 Sum_probs=30.1
Q ss_pred ecccHHHHHHHHHHHhcCCCeeEEEEecCCcEEEEEecCCHHHHHHHHHHcCCce
Q 008811 17 NVDCDGCKQKVKKVLRKIDGVYSTNVDVEQGKVTVTGNVDPAILIKKLEKLGKHA 71 (552)
Q Consensus 17 ~m~C~gCa~KIekaL~kIeGV~sV~Vdla~~kVtV~g~idpeeII~aI~KaGf~A 71 (552)
.-.|+.|. ++++.|... +|.-..+++.. ...+.++|.+.+.+++..+
T Consensus 7 ~~~C~~c~-ka~~~L~~~-gi~~~~~di~~------~~~~~~el~~~l~~~~~~~ 53 (120)
T 3l78_A 7 SPSCTSCR-KARAWLNRH-DVVFQEHNIMT------SPLSRDELLKILSYTENGT 53 (120)
T ss_dssp CSSCHHHH-HHHHHHHHT-TCCEEEEETTT------SCCCHHHHHHHHHHCSSTH
T ss_pred CCCCHHHH-HHHHHHHHc-CCCeEEEeccc------CCCcHHHHHHHHhhcCCCH
Confidence 35899998 556666653 56544444433 2356788888888777653
No 83
>1wik_A Thioredoxin-like protein 2; picot homology 2 domain, picot protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=20.07 E-value=74 Score=26.25 Aligned_cols=32 Identities=25% Similarity=0.400 Sum_probs=20.4
Q ss_pred cEEEEEEe-----cccHHHHHHHHHHHhcCCCeeEEEEe
Q 008811 10 QSCVLRVN-----VDCDGCKQKVKKVLRKIDGVYSTNVD 43 (552)
Q Consensus 10 qkv~LkV~-----m~C~gCa~KIekaL~kIeGV~sV~Vd 43 (552)
.+++|... -.|+.|. ++++.|..+ +|....|+
T Consensus 15 ~~vvvy~~g~~~~~~Cp~C~-~ak~~L~~~-~i~~~~vd 51 (109)
T 1wik_A 15 ASVMLFMKGNKQEAKCGFSK-QILEILNST-GVEYETFD 51 (109)
T ss_dssp SSEEEEESSTTTCCCSSTHH-HHHHHHHHT-CSCEEEEE
T ss_pred CCEEEEEecCCCCCCCchHH-HHHHHHHHc-CCCeEEEE
Confidence 34555555 5899998 667777765 45444443
Done!