Citrus Sinensis ID: 008813

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550--
Protein Sequence
MAEVSSSDVETVIEFLRKNGFKEAESALKEDMMEKIRDLGSFDYEKFLFPVLPPVKIPASLRQTEVDEGGADRSSRSSSASSSDDDEFVSLASSTSDLCSSEFTNPYGLRSTSHGNSEASSESLSQFDTARDYDLQNDFYWHDEKDEGYFMTPSYGGSDFFGCPSEDKFIMTSEADRLFENPLAVYDQSEGLHSEASTDYLDKPCLFHIVPLNDDKEVGVTDYYRFEKTNQPEAGGIKEKLKDCAAYGCSEPLCKCCAGEGKINNDYGYLSSKEADLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGAEKDLMPAEIDNSDTRDGEVNGALHEGKADAEEHGVATPDLLMFDNLEEECEIFHLRIIHRKNRTGFEENKDLPIILNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCFSF
Secondary Structure (PSIPRED)
ccccccccHHHHHHHHHHcccHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHccccccccccccccccccccccccccccccccccccccccEEEccEEccEEEEEccccccccccEEEEEEcccccEEEEEEEEccHHHHHHHHHHHHHHHHHHHccccccccEEEEEccccccccEEEEEcccccHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHcccccEEEccccc
Secondary Structure Prediction (SSPRO)
ccHHccccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHcccccHHHHccccccccccccccccccccccccccccccccccccccccEEEcccccccccccccccccccccccccccccccccccHcccccccccccccccccccccccccccccccccccccccccEEEEccccccccccccccccccccccccccccccccccEEEEcccccccccccccccEEEccccccccccHHHHHHEEEEEcccccccccccccccccccEEEcccccccccccHHHccccccccccccccccccccccccccccccHHHHcccHHHHHHcccccccccccHHcccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHcccccEEEEcccccccccccccEEEEcccEEEEcEEEEEEEEEcccEEEEEEEEccccEEEEEEEEcccHHHHHHHHHHHHHHHHHHHccccHHccEEEEEcEEEEcccEEHHHHHHHHHHHHHHHHccccccEEEEcHHHHHHHHHHHHHHHHHHHHcccccHHHccccc
Coil and Loop (DISEMBL)
maevsssdVETVIEFLRKNGFKEAESALKEDMMEKIRDlgsfdyekflfpvlppvkipaslrqtevdeggadrssrsssasssdddefVSLAsstsdlcsseftnpyglrstshgnseasseslsqfdtardydlqndfywhdekdegyfmtpsyggsdffgcpsedkfimtseadrlfenplavydqseglhseastdyldkpclfhivplnddkevgvtdyyrfektnqpeaggikeklkdcaaygcseplckccagegkinndygylsskeadlidlqhnvvgdsstdcdlaphpgteksssyssskrgssidwiegfkgssdlhfkgaekdlmpaeidnsdtrdgevngalhegkadaeehgvatpdllmfdNLEEECEIFHLRIIHrknrtgfeenkdlpiiLNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKlvnkndpadehhILRLYDYFYHLEHLFIVCELLRANLYEFQkfnqesggeayfTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCFSF
Flexible Loop (DISEMBL)
maevsssdveTVIEFLRKNGFKEAESALKEDMMEKIRDLGSFDYEKFLFPVLPPVKIPASLRqtevdeggadrssrsssasssdddEFVSLASSTSDLCSSEFTNPYGLRSTSHGNSEASSESLSQFDTARDYDLQNDFYWHDEKDEGYFMTPSYGGSDFFGCPSEDKFIMTSEADRLFENPLAVYDQSEGLHSEASTDYLDKPCLFHIVPLNDDKEVGVTDYYRFektnqpeaggikEKLKDCAAYGCSEPLCKCCAGEGKINNDYGYLSSKEADLIDLQHNVVGDSSTDCDLAPhpgteksssyssskrgSSIDWIEGFKGSSDLHFKGAEKDLMPAEIDNSDTRDGEVNGALHEgkadaeehgvATPDLLMFDNLEEECEIFHLRIIHRknrtgfeenkdlpIILNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKlvnkndpadEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCFSF
Low Complexity Region (SEG)
MAEVSSSDVETVIEFLRKNGFKEAESALKEDMMEKIRDLGSFDYEKFLFPVLPPVKIPASLRQTEVdeggadrssrsssasssdddeFVslasstsdlcssEFTNPYGLRSTSHGNSEASSESLSQFDTARDYDLQNDFYWHDEKDEGYFMTPSYGGSDFFGCPSEDKFIMTSEADRLFENPLAVYDQSEGLHSEASTDYLDKPCLFHIVPLNDDKEVGVTDYYRFEKTNQPEAGGIKEKLKDCAAYGCSEPLCKCCAGEGKINNDYGYLSSKEADLIDLQHNVVGDSSTDCDLAPHPGTEKsssyssskrgssIDWIEGFKGSSDLHFKGAEKDLMPAEIDNSDTRDGEVNGALHEGKADAEEHGVATPDLLMFDNLEEECEIFHLRIIHRKNRTGFEENKDLPIILNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTflltllmliflllviyfilfcfSF
Disordered region (IsUnstruct)
***********VIEFLR*****************KIRDLGSFDYEKFLFPVLPPVKI*************************************************************************RDYDLQNDFYWHDEKDEGYFMTPSYGGSDFFGCPSEDKFIMTSEADRLFENPLAVYDQSEGLHSEASTDYLDKPCLFHIVPLNDDKEVGVTDYYRFEKTNQPEAGGIKEKLKDCAAYGCSEPLCKCCAGEGKINNDYGYLSSKEADLIDLQHNVV*******************************WI************************************************VATPDLLMFDNLEEECEIFHLRIIHRKNRTGFEENKDLPIILNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF**
Disordered Region (DISOPRED)
********VETVIEFLRKNGFKEAESALKED***********DYEKFLF**********************************************************************************************************************************************************************************************************************************************************************************************************************************LLMFDNLEEECEIFHLRIIHRKNRTGFEENKDLPIILNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCFSF
Disordered Region (DISEMBL)
**********TVIEFLRKNGFKEAESALKEDMMEKIRDLGSFDYEKFLFPVLPPVKIPASLR*********************************SDLCSSEFTNPYGLR****************FDTARDYDLQNDFYWHDEKDEGYFMTPSYGGSDFFGCPSEDKFIMTSEADRLFENPLAVYDQSEGLHSEASTDYLDKPCLFHIVPLNDDKEVGVTDYYRFEKTNQPEAGGIKEKLKDCAAYGCSEPLCKCCAGEGKINNDYGYLSSKEADLIDLQHNVVGDSSTDCDLAP*****************SIDWIEGFKGSSDLHFKGAEKDLMPAEIDNSDTRDGEVNGALHEGKADAEEHGVATPDLLMFDNLEEECEIFHLRIIHRKNRTGFEENKDLPIILNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCFSF
Disordered Region (DISPRO)
******SDVETVIEFLRKNGFKEAESALKEDMMEKIRDLGSFDYEKFLFPVLPPVKIP****************************************CS*E*TN**********************DT*RDYDLQNDFYWHDEKDEGYFMTP*YGGSDFFGCPSEDKFIMTSEADRLFENPLAVYDQSEGLHSEASTDYLDKPCLFHIVPLNDDKEVGVTDYYRFEKTNQPEAGGIKEKLKDCAAYGCSEPLCKCCAGEGKINNDYGYLSSKEADLIDLQH*VVGDSSTDCD*****************************************************************KADAEEHGVATPDLLMFDNLEEECEIFHLRIIHRKNRTGFEENKDLPIILNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCFS*
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHii
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHii
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAEVSSSDVETVIEFLRKNGFKEAESALKEDMMEKIRDLGSFDYEKFLFPVLPPVKIPASLRQTEVDEGGADRSSRSSSASSSDDDEFVSLASSTSDLCSSEFTNPYGLRSTSHGNSEASSESLSQFDTARDYDLQNDFYWHDEKDEGYFMTPSYGGSDFFGCPSEDKFIMTSEADRLFENPLAVYDQSEGLHSEASTDYLDKPCLFHIVPLNDDKEVGVTDYYRFEKTNQPEAGGIKEKLKDCAAYGCSEPLCKCCAGEGKINNDYGYLSSKEADLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGAEKDLMPAEIDNSDTRDGEVNGALHEGKADAEEHGVATPDLLMFDNLEEECEIFHLRIIHRKNRTGFEENKDLPIILNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCFSF
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	552	2.2.26 [Sep-21-2011]
Q09690	1087	Dual specificity protein	yes	no	0.282	0.143	0.364	5e-17
Q9P6P3	534	Serine/threonine-protein	no	no	0.193	0.200	0.435	1e-16
Q54BC9	915	Probable serine/threonine	yes	no	0.184	0.111	0.421	4e-16
P14680	807	Dual specificity protein	yes	no	0.244	0.167	0.358	9e-16
Q54QV3	1458	Probable serine/threonine	no	no	0.231	0.087	0.367	4e-14
Q8BI55	632	Dual specificity tyrosine	yes	no	0.242	0.212	0.340	7e-14
Q9V3D5	722	Dual specificity tyrosine	yes	no	0.257	0.196	0.308	7e-14
Q76NV1	836	Probable serine/threonine	no	no	0.244	0.161	0.330	3e-13
Q9NR20	520	Dual specificity tyrosine	yes	no	0.233	0.248	0.352	7e-13
Q08DZ2	1008	Serine/threonine-protein	no	no	0.322	0.176	0.309	2e-12

>sp|Q09690|POM1_SCHPO Dual specificity protein kinase pom1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pom1 PE=1 SV=1

 Score = 89.7 bits (221), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 58/159 (36%), Positives = 83/159 (52%), Gaps = 3/159 (1%)

Query: 397 GFE-ENKDLPIILNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFD 455
           GF+ E  D  ++L   IA RY V ++LG  +F +V +  D  TG  V LKII+N K F  
Sbjct: 679 GFDDERGDYKVVLGDHIAYRYEVVDFLGKGSFGQVLRCIDYETGKLVALKIIRNKKRFHM 738

Query: 456 QSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGE 515
           Q+L E K+L+ + + DP DE+ +++  D+FY  +HL +  ELL  NLYE  K N   G  
Sbjct: 739 QALVETKILQKIREWDPLDEYCMVQYTDHFYFRDHLCVATELLGKNLYELIKSNGFKGLP 798

Query: 516 AYF--TLGRLQVCSTFLLTLLMLIFLLLVIYFILFCFSF 552
                ++ R  +    LL    +I   L    IL C  F
Sbjct: 799 IVVIKSITRQLIQCLTLLNEKHVIHCDLKPENILLCHPF 837

Involved in localization of polarized growth and cytokinesis. May interact with both the actin and microtubule cytoskeleton. Requires tea1 for localization to the cell ends but not to the cell center.
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)
EC: 2EC: .EC: 7EC: .EC: 1EC: 2EC: .EC: 1

>sp|Q9P6P3|PPK15_SCHPO Serine/threonine-protein kinase ppk15 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=ppk15 PE=1 SV=1

 Score = 88.2 bits (217), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 47/108 (43%), Positives = 66/108 (61%), Gaps = 1/108 (0%)

Query: 407 ILNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKL 466
           +L T    +Y + + LG   F +V + QDL T   V +K+IKN   F++Q + E+ +L+L
Sbjct: 121 LLGTDEGRKYLILDTLGHGTFGQVARCQDLKTQQIVAIKVIKNKPAFYNQCVMEVSILEL 180

Query: 467 VN-KNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESG 513
           +N K DP D+ H++RLYD F H  HL +V ELL  NLYE  K NQ  G
Sbjct: 181 LNNKYDPEDKRHLIRLYDQFMHKNHLCLVFELLSINLYELIKQNQFRG 228

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q54BC9|DYRK2_DICDI Probable serine/threonine-protein kinase dyrk2 OS=Dictyostelium discoideum GN=dyrk2 PE=3 SV=1

 Score = 86.7 bits (213), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 43/102 (42%), Positives = 59/102 (57%)

Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKND 471
           IA R+ +   LG  +F +V +  D  TG  V LKI++N K F +Q+L EIK+L+ +  ND
Sbjct: 601 IAYRFEIVSILGQGSFCQVVKGYDYKTGEMVALKILRNQKRFHNQALTEIKILEYLKTND 660

Query: 472 PADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESG 513
           P     I+ L +YFY   HL +  ELL  NLY+F K N   G
Sbjct: 661 PNSTASIVHLNNYFYFRNHLILTFELLSMNLYDFLKVNHFQG 702

Dictyostelium discoideum (taxid: 44689)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 2

EC: .

EC: 1

>sp|P14680|YAK1_YEAST Dual specificity protein kinase YAK1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YAK1 PE=1 SV=1

 Score = 85.5 bits (210), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 53/148 (35%), Positives = 81/148 (54%), Gaps = 13/148 (8%)

Query: 393 KNRTGFEE-NKDLPIILNTVIA----GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKII 447
           K   GF+  N D  + +N V+      +Y V + LG   F +V + Q+L T   + +K++
Sbjct: 341 KCNNGFDNINSDYILYVNDVLGVEQNRKYLVLDILGQGTFGQVVKCQNLLTKEILAVKVV 400

Query: 448 KNDKDFFDQSLDEIKLLKLVN-KNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQ 506
           K+  ++  QS+ E K+L+L+N K DP ++HH LR+YD F H  HL +V ELL  NLYE  
Sbjct: 401 KSRTEYLTQSITEAKILELLNQKIDPTNKHHFLRMYDSFVHKNHLCLVFELLSNNLYELL 460

Query: 507 KFNQESGGEAYFTLGRLQVCSTFLLTLL 534
           K N+  G         +Q+  TF   +L
Sbjct: 461 KQNKFHGLS-------IQLIRTFTTQIL 481

Negative regulator of the cell cycle acting downstream of the cAMP-dependent protein kinase. Part of a glucose-sensing system involved in growth control in response to glucose availability. Phosphorylates POP2.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 2

EC: .

EC: 1

>sp|Q54QV3|YAKA_DICDI Probable serine/threonine-protein kinase yakA OS=Dictyostelium discoideum GN=yakA PE=1 SV=1

 Score = 80.1 bits (196), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 50/136 (36%), Positives = 72/136 (52%), Gaps = 8/136 (5%)

Query: 406 IILNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLK 465
           II N     +Y V + LG   F +V + ++  T   V +KI+KN + +F Q   EI+ LK
Sbjct: 195 IITNNESGQKYKVLDSLGQGTFGQVVKCKNCDTDELVAIKILKNKQAYFQQGRLEIQTLK 254

Query: 466 LVN-KNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQ 524
            +N ++DP D++HILRL D F H  HL IV ELL  NL+E  K N   G           
Sbjct: 255 SLNDQHDPEDKNHILRLLDSFIHKMHLCIVFELLSVNLFELIKQNNFRGLST-------N 307

Query: 525 VCSTFLLTLLMLIFLL 540
           +   FL+ +L  + +L
Sbjct: 308 LIKVFLIQILDALIVL 323

General sensor of environmental conditions, such as heat stress, effecting changes through pkaC. Essential for survival to nitrosoative and oxidative stresses. Required for cell cycle control, not only at the onset but also during development (aggregation process and postaggregative development).

Dictyostelium discoideum (taxid: 44689)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 2

EC: .

EC: 1

>sp|Q8BI55|DYRK4_MOUSE Dual specificity tyrosine-phosphorylation-regulated kinase 4 OS=Mus musculus GN=Dyrk4 PE=1 SV=1

 Score = 79.3 bits (194), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 47/138 (34%), Positives = 76/138 (55%), Gaps = 4/138 (2%)

Query: 407 ILNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKL 466
           +L+  IA RY V E +G  +F +V +  D      V LKII+N K F  Q+L E+K+L+ 
Sbjct: 210 VLHDHIAYRYEVLEMIGKGSFGQVAKCLDHKNNELVALKIIRNKKRFHHQALVELKILEA 269

Query: 467 VNKNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVC 526
           + + D  + H+++ + D+FY   HL I  ELL  NLYE  K N   G    F L  ++  
Sbjct: 270 LRRKDKDNNHNVVHMKDFFYFRNHLCITFELLGINLYELMKNNSFHG----FNLSIVRRF 325

Query: 527 STFLLTLLMLIFLLLVIY 544
           +  +L  L ++++  +I+
Sbjct: 326 TFSILKCLHMLYVEKIIH 343

Possible non-essential role in spermiogenesis.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 2

EC: .

EC: 1

>sp|Q9V3D5|DYRK2_DROME Dual specificity tyrosine-phosphorylation-regulated kinase 2 OS=Drosophila melanogaster GN=smi35A PE=1 SV=1

 Score = 79.3 bits (194), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 45/146 (30%), Positives = 80/146 (54%), Gaps = 4/146 (2%)

Query: 399 EENKDLPIILNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSL 458
           ++N +  II +  IA RY + E +G  +F +V +A D  T   V +KII+N K F +Q++
Sbjct: 181 DDNGNYKIIEHDHIAFRYEILEVIGKGSFGQVIRALDHKTNTHVAIKIIRNKKRFLNQAV 240

Query: 459 DEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYF 518
            E+ +L  + + D    H+++ + DY Y  +HL I  EL+  NLYE  K N  +G    F
Sbjct: 241 VELNILDELREKDADGSHNVIHMLDYTYFRKHLCITFELMSLNLYELIKKNNYNG----F 296

Query: 519 TLGRLQVCSTFLLTLLMLIFLLLVIY 544
           ++  ++     ++  L L++   +I+
Sbjct: 297 SMSLIRRFCNSIVKCLRLLYKENIIH 322

In vitro; can phosphorylate exogenous substrates on Ser and Thr residues. May have a physiological role in development being involved in cellular growth and differentiation.

Drosophila melanogaster (taxid: 7227)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 2

EC: .

EC: 1

>sp|Q76NV1|DYRK1_DICDI Probable serine/threonine-protein kinase dyrk1 OS=Dictyostelium discoideum GN=dyrk1 PE=3 SV=1

 Score = 77.4 bits (189), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 47/142 (33%), Positives = 74/142 (52%), Gaps = 7/142 (4%)

Query: 399 EENKDLPIILNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSL 458
           +EN D  + +  V   R+ +   LG  +F +V +A D      V +KIIKN   F++Q+L
Sbjct: 287 DENADYIVRIGEVFVDRFEIISSLGKGSFGQVVKAFDSVLKEYVAIKIIKNKVPFYNQAL 346

Query: 459 DEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYF 518
            EI+LL+L+N  DP D++ I++L  +F    HL IV ELL  NLY+  +         +F
Sbjct: 347 IEIRLLELMNNKDPEDQYKIIKLKHHFKFRNHLCIVTELLSYNLYDLLR-------NTHF 399

Query: 519 TLGRLQVCSTFLLTLLMLIFLL 540
               L +   F   +L  +F +
Sbjct: 400 HGVSLNLIKKFAHQILTALFFM 421

Dictyostelium discoideum (taxid: 44689)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 2

EC: .

EC: 1

>sp|Q9NR20|DYRK4_HUMAN Dual specificity tyrosine-phosphorylation-regulated kinase 4 OS=Homo sapiens GN=DYRK4 PE=1 SV=2

 Score = 75.9 bits (185), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 48/136 (35%), Positives = 73/136 (53%), Gaps = 7/136 (5%)

Query: 407 ILNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKL 466
           +L+  IA RY V E +G  +F +V +  D      V LKII+N K F  Q+L E+K+L+ 
Sbjct: 95  VLHDHIAYRYEVLETIGKGSFGQVAKCLDHKNNELVALKIIRNKKRFHQQALMELKILEA 154

Query: 467 VNKNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVC 526
           + K D  + ++++ + D+FY   H  I  ELL  NLYE  K N   G    F+L    + 
Sbjct: 155 LRKKDKDNTYNVVHMKDFFYFRNHFCITFELLGINLYELMKNNNFQG----FSLS---IV 207

Query: 527 STFLLTLLMLIFLLLV 542
             F L++L  + +L V
Sbjct: 208 RRFTLSVLKCLQMLSV 223

Possible non-essential role in spermiogenesis.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 2

EC: .

EC: 1

>sp|Q08DZ2|PRP4B_BOVIN Serine/threonine-protein kinase PRP4 homolog OS=Bos taurus GN=PRPF4B PE=2 SV=1

 Score = 75.1 bits (183), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 61/197 (30%), Positives = 94/197 (47%), Gaps = 19/197 (9%)

Query: 335 DLMPAEIDNSDTRDGEVNGALHEGKADAEEHGVATPDLLMFDNLEEECEIFHLRIIHRKN 394
           D+   E +N DT +  V  A H   A  + +G +   LL  D   E  ++F       + 
Sbjct: 592 DVKEYERENVDTFEASVK-AKHNLMAVEQNNGSSQKKLLAPDMFTESDDMFAAYFDSARL 650

Query: 395 RTG-----FEENKDLP-----------IILNTVIAGRYYVTEYLGSAAFSKVFQAQD-LH 437
           R       F+EN +L            + +  V+  RY V  Y G   FS V +A+D   
Sbjct: 651 RAAGIGKDFKENPNLRDNWTDAEGYYRVNIGEVLDKRYNVYGYTGQGVFSNVVRARDNAR 710

Query: 438 TGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCEL 497
              +V +KII+N++      L E++ LK +N  DP D+ H LRL+ +FYH +HL +V E 
Sbjct: 711 ANQEVAVKIIRNNELMQKTGLKELEFLKKLNDADPDDKFHCLRLFRHFYHKQHLCLVFEP 770

Query: 498 LRANLYE-FQKFNQESG 513
           L  NL E  +K+ ++ G
Sbjct: 771 LSMNLREVLKKYGKDVG 787

Has a role in pre-mRNA splicing. Phosphorylates SF2/ASF.

Bos taurus (taxid: 9913)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	552
297736602	728	unnamed protein product [Vitis vinifera]	0.956	0.725	0.559	1e-151
224101151	725	predicted protein [Populus trichocarpa]	0.905	0.689	0.539	1e-151
356551440	710	PREDICTED: dual specificity tyrosine-pho	0.934	0.726	0.501	1e-121
357492707	612	Dual specificity tyrosine-phosphorylatio	0.913	0.823	0.472	1e-101
226506060	725	ATP binding protein [Zea mays] gi|195616	0.891	0.678	0.392	9e-81
357125722	715	PREDICTED: dual specificity protein kina	0.878	0.678	0.381	3e-79
413952032	714	putative protein kinase superfamily prot	0.889	0.687	0.375	9e-79
212275250	724	uncharacterized protein LOC100191468 [Ze	0.889	0.678	0.375	1e-78
357125720	726	PREDICTED: dual specificity protein kina	0.884	0.672	0.379	2e-78
359486399	596	PREDICTED: probable serine/threonine-pro	0.356	0.330	0.747	8e-78

>gi|297736602|emb|CBI25473.3| unnamed protein product [Vitis vinifera]

 Score =  542 bits (1397), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 309/552 (55%), Positives = 381/552 (69%), Gaps = 24/552 (4%)

Query: 4   VSSSDVETVIEFLRKNGFKEAESALKEDMMEKIRDLGSFDYEKFLFPVLPPV---KIPAS 60
           ++ SDV+ V+EFLRK G  E+ESAL++D+ E+   + SFD+E F+FP++PP    +IPAS
Sbjct: 1   MAVSDVDAVLEFLRKYGLSESESALRQDVSER-GGVASFDFESFVFPMVPPPPPVRIPAS 59

Query: 61  LRQTEVDEGGADRSSRSSSASSSDDDEFVSLASSTSDLCSSEFTNPYGLRSTSHGNSEAS 120
            R+ E   G  D SS  S       D+FVSL SS +D  SSEFTNPYG+ S +  NS AS
Sbjct: 60  SRRMEEAVGDTDSSSVCS-------DDFVSLGSSATDAYSSEFTNPYGVHSATQANSTAS 112

Query: 121 SESLSQFDTARDY---DLQNDFYWHDEKDEGYFMTPSYGGSDFFGCPSEDKFIMTSEADR 177
           S+SL +F TARDY   D+QND YW+DEKD+ YF T  +GGS+ FGCPSEDKF+MT E D+
Sbjct: 113 SDSLCEFGTARDYSDFDMQNDLYWYDEKDDDYFNTSCFGGSESFGCPSEDKFVMTLEKDK 172

Query: 178 LFENPLAVYDQSEGLHSEASTDYLDKPCLFHIVPLNDDKEVGVTDYYRFEKTNQPEAGGI 237
             E+ L +  +SEG  +  +T+YL+KPC+F++  ++   ++ VTDYY   +  QP+ G  
Sbjct: 173 QSESQLTLIHKSEGYPTLPTTNYLEKPCVFNLTSMDGVNDIPVTDYYHLGEHFQPD-GAR 231

Query: 238 KEKLKDCAAYGCSEPLCKCCAG----EGKINNDYGYLSSKEADLIDLQHNVVGDSSTDCD 293
           +   + CA Y CS PLCKCCAG     G    DY  ++  E DL   Q  VVG   TDCD
Sbjct: 232 EGDHESCAVYSCSVPLCKCCAGAEGFRGGDPVDYSQMNFAETDLDGSQLKVVGKIPTDCD 291

Query: 294 LAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGAEKDLMPAEIDNSDTRDGEVNG 353
            A      KS  YS  KR S+ D I  FK +SDLH +  E +            DGEV G
Sbjct: 292 SASEYKINKSFDYSI-KRSSANDLIGEFKSTSDLHIENTEPN---GNYGYEVGDDGEVAG 347

Query: 354 ALHEGKADAEEHGVATPD-LLMFDNLEEECEIFHLRIIHRKNRTGFEENKDLPIILNTVI 412
             +E +A+ ++   AT D LLM++N E+E E+F+LRIIHRKNRTGFEENKDLPI+LNTV+
Sbjct: 348 ECYEPEANVDDQEGATADELLMYENQEDEYEVFNLRIIHRKNRTGFEENKDLPIVLNTVL 407

Query: 413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDP 472
           AGRYY+TEYLGSAAFSKV QA DL TG+DVCLKIIKNDKDFFDQSLDEIKLLK VNK+DP
Sbjct: 408 AGRYYITEYLGSAAFSKVVQAHDLQTGMDVCLKIIKNDKDFFDQSLDEIKLLKYVNKHDP 467

Query: 473 ADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLT 532
           ADE HILRLYDYFYH EHLFIVCELLRANLYEFQKFNQESGGE YFTL RLQV +   L 
Sbjct: 468 ADERHILRLYDYFYHQEHLFIVCELLRANLYEFQKFNQESGGETYFTLKRLQVITRQCLE 527

Query: 533 LLMLIFLLLVIY 544
            L  +  L +I+
Sbjct: 528 ALEYLHDLGIIH 539

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224101151|ref|XP_002312161.1| predicted protein [Populus trichocarpa] gi|222851981|gb|EEE89528.1| predicted protein [Populus trichocarpa]

 Score =  540 bits (1392), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 308/571 (53%), Positives = 376/571 (65%), Gaps = 71/571 (12%)

Query: 8   DVETVIEFLRKNGFKEAESALKEDMMEKIRDLGSFDYEKFLFPVLPPVKIPASLRQTEVD 67
           DVE V++FLRKNG ++AE ALKEDM+E+  +LGSFD+EKFLF VLPPV++PAS+R  +V+
Sbjct: 14  DVEAVLDFLRKNGLRDAELALKEDMIERSNELGSFDFEKFLF-VLPPVRVPASVRPLDVE 72

Query: 68  EGGADRSSRSSSASSSDDDEFVSLASSTS--DLCSSEFTNPYGLRSTSHGNSEASSESLS 125
           EGG       SS+ S  DDEFVSL SSTS  ++ SSEF+NPYGL STS  NSE SS+ LS
Sbjct: 73  EGGGAVERLRSSSGSPSDDEFVSLGSSTSASEVYSSEFSNPYGLHSTSQANSETSSDRLS 132

Query: 126 QFDTARDY---DLQNDFYWHDEKDEGYFMTPSYGGSDFFGCPSEDKFIMTSEADRLFENP 182
           QF TARDY   D+QND YW+DEK+EG+FM+P + G D+FGCPSEDKF+MTSE  + FEN 
Sbjct: 133 QFGTARDYPDFDMQNDSYWYDEKEEGHFMSPCFNGPDYFGCPSEDKFVMTSETGKQFENS 192

Query: 183 LAVYDQSEGLHSEASTDYLDKPCLFHIVPLNDDKEVGVTDYYR-FEKTNQPEAGGIKEKL 241
           L +YD+SEG  ++ + DYLDK CL+++  +N+  E    +Y+  F+K NQ E G I    
Sbjct: 193 LGLYDKSEG-ETQGNIDYLDKQCLYNVTSVNNKNEAQSMNYHHDFDKKNQLE-GDID--- 247

Query: 242 KDCAAYGCSEPLCKCCAGEGKINNDYGYLSSKEADLIDLQHNVVGDSSTDCDLAPHPGTE 301
           +D ++   ++   +     G+I+ D  Y SSK  DL D Q   VG+S TD D  P     
Sbjct: 248 RDGSSAHNAKFFTETGGIYGRISVDCIYTSSKGPDLGDFQLK-VGESPTDYDTVP----- 301

Query: 302 KSSSYSSSKRGSSIDWIEGFKGSSDLHFKGAEKDLMPAEIDNSDTRD-GEVNGALHEGKA 360
                                    +H +    +     ID+ +  D G VNG  HE  A
Sbjct: 302 -------------------------VHMENKNANYYENGIDDFEVGDGGGVNGEAHELAA 336

Query: 361 DAEEHGVATPDLLMFDNLEEECEIFHLRIIHRKNR------------------------- 395
                 V   +LLM+ N E+E E+F+LR+IHRKNR                         
Sbjct: 337 AIGGEDVNANELLMYYNQEDEYEVFNLRVIHRKNRSCGHGIDPADSTLFSWRSDACAMQV 396

Query: 396 --TGFEENKDLPIILNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDF 453
             TGFEENKDLPI+LNTVIAGRYYVTEYLGSAAFSKV QA DLHTG+DVCLKIIKNDKDF
Sbjct: 397 KWTGFEENKDLPIVLNTVIAGRYYVTEYLGSAAFSKVIQAHDLHTGIDVCLKIIKNDKDF 456

Query: 454 FDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESG 513
           FDQSLDEIKLLK+VNK DPADE HILRLYDYFYH EHLFIVCELL+ANLYEFQKFNQESG
Sbjct: 457 FDQSLDEIKLLKIVNKLDPADERHILRLYDYFYHQEHLFIVCELLKANLYEFQKFNQESG 516

Query: 514 GEAYFTLGRLQVCSTFLLTLLMLIFLLLVIY 544
           GEAYFTL RLQV +   L  L  +  L +I+
Sbjct: 517 GEAYFTLSRLQVITRQCLEALEYLHDLGIIH 547

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356551440|ref|XP_003544083.1| PREDICTED: dual specificity tyrosine-phosphorylation-regulated kinase 4-like [Glycine max]

 Score =  442 bits (1138), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 277/552 (50%), Positives = 345/552 (62%), Gaps = 36/552 (6%)

Query: 6   SSDVETVIEFLRKNGFKEAESALKEDMMEKIRDLGSFDYEKFLFPVLPPVKIPASLRQTE 65
           S+ VE V+EFLRKNG  EAESAL++D++E   DLG+FDYEKF FP++PP         + 
Sbjct: 4   SNGVEAVLEFLRKNGLSEAESALRQDIIEN-NDLGNFDYEKFFFPMVPPPPPVRVRSFSR 62

Query: 66  VDEGGADRSSRSSSASSSDDDEFVSLASSTSDLCSSEFTNPYGLRSTSH--GNSEASSES 123
           + E  AD      + S S  DEFVS+ S TS + SSEF NPYG+RS+S    +S +SSE 
Sbjct: 63  LSELSAD-----GNCSKSSSDEFVSIGSPTSRVSSSEFINPYGIRSSSQTQNDSASSSER 117

Query: 124 LSQFDTARDY---DLQNDFYWHDEKDEGYFMTPSYGGSDFFGCPSEDKFIMTSEADRLFE 180
           LSQF TARDY   ++QN+ YW++EKD+ YFMTPS+ G DFF C SEDKF+MT+E +   +
Sbjct: 118 LSQFGTARDYHDFEMQNEPYWYNEKDDDYFMTPSFEGPDFFACQSEDKFVMTAETENQHD 177

Query: 181 NPL-AVYDQSEGL-HSEASTDYLDKPCLFHIVPLNDDKEVGVTDYYRFEKTNQPEAGGIK 238
           N L  VY+  E L     +  ++DK CL++   + D       +Y   +  N  E     
Sbjct: 178 NSLDLVYNSEEFLLKGNGNGGFMDKACLYNHSSVRDGNATYSKEYCHVDNNNLFEGELEG 237

Query: 239 EKLKDCAAYGCSEPLCKCCAGEGKINND---YGYLSSKEADLIDLQHNVVGDSSTDCDLA 295
           +  K   A  C  P CK   G G  + D   +GY + KE   I L+   +    +  +L 
Sbjct: 238 KAEKHTVACSCEVPFCKSSPG-GSCSLDPTNFGYPNLKE---IHLKFGDINSFDSTSELT 293

Query: 296 PHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGAEKDLMPAEIDNSDTRDGEVNGAL 355
            +   +  +   SSK          + G  DL  K  +KDL P  +D    RDG   G L
Sbjct: 294 VNQSFDYYTKNDSSKE---------YNGPYDLTIKVNQKDL-PNGLDTYKARDG---GEL 340

Query: 356 HEGKADAE---EHGVATPDLLMFDNLEEECEIFHLRIIHRKNRTGFEENKDLPIILNTVI 412
            E   D E   +    T D L+    EEE E+F LRIIHRKNRTGFEENK+LPI+LNTV+
Sbjct: 341 AEECQDPEITADGEDTTDDELLKYTQEEEYEVFDLRIIHRKNRTGFEENKELPIVLNTVL 400

Query: 413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDP 472
           AGRYYVTEYLGSAAFS+V QA DL TG+DVCLKIIKNDKDFFDQSLDEIKLLKLVNK+DP
Sbjct: 401 AGRYYVTEYLGSAAFSRVVQAHDLQTGIDVCLKIIKNDKDFFDQSLDEIKLLKLVNKHDP 460

Query: 473 ADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLT 532
           AD HH LRLYDYFYH EHLFIV ELL+ANLYEFQKF QESGGE YFTL RLQ+ +   L 
Sbjct: 461 ADLHHFLRLYDYFYHQEHLFIVTELLQANLYEFQKFKQESGGEEYFTLNRLQLITRQCLE 520

Query: 533 LLMLIFLLLVIY 544
            L  +  L +++
Sbjct: 521 ALQYLHSLGIVH 532

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357492707|ref|XP_003616642.1| Dual specificity tyrosine-phosphorylation-regulated kinase [Medicago truncatula] gi|355517977|gb|AES99600.1| Dual specificity tyrosine-phosphorylation-regulated kinase [Medicago truncatula]

 Score =  377 bits (967), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 266/563 (47%), Positives = 346/563 (61%), Gaps = 59/563 (10%)

Query: 6   SSDVETVIEFLRKNGFKEAESALKEDMMEK-IRDLGSFDYEKFLFPVLPPV---KIPASL 61
           S+ VE V EFLRKNG  EAESAL++D+++K   DL SFDYEKF FP++PP    K+ +  
Sbjct: 4   SNSVEAVFEFLRKNGLSEAESALRQDIIDKHNNDLASFDYEKFFFPMVPPPPPVKLRSFS 63

Query: 62  RQTEVDEGGADRSSRSSSASSSDDDEFVSLASSTSDLCSS----EFTNPYGLRSTSH--G 115
           R +E   G   + S+S+S SS  +++FVS+ASSTS   S     EF NPYG+ S+S    
Sbjct: 64  RPSEFTSGDG-QFSKSNSVSS--EEQFVSIASSTSPSRSRVSSSEFINPYGINSSSQTQN 120

Query: 116 NSEASSESLSQFDTARDY---DLQNDFYWHDEKDEGYFMTPSYG-GSDFFGCPSEDKFIM 171
           +SE+SS+ LSQF TARDY   D+Q++ YW++E D+          G DFFGC SEDKFI+
Sbjct: 121 DSESSSDRLSQFGTARDYHEFDMQHEPYWYNENDDDDDFMTPDFDGPDFFGCQSEDKFIL 180

Query: 172 TSEADRLFENPLAVYDQSEGLHSEASTDYLDKP---CLFHIVPLNDDKEVGVTDYYRFEK 228
            SE +   ++   ++   E +  E +  Y+DK    CL +     D+      DY     
Sbjct: 181 NSETENQQDDSRDLHYNFEEIQLEGNEGYIDKSMEQCLCNHSSGGDENATYSKDYCH--- 237

Query: 229 TNQPEAGGIKEKLKDCAAYGCSEPLCKCCAG------EGKINNDYGYLSSKEADLIDLQH 282
                 G  KE +    A+ C  P CK   G      E  +N  + YL+ KE  L +L  
Sbjct: 238 ------GAEKEAI----AHNCEVPFCKSSPGSGGSCSEDPMN--FSYLNLKEIKL-NLND 284

Query: 283 NVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGAEKDLMPAEID 342
             + D ++  D  P    + SS              + +K   DL  +  E DL P  I+
Sbjct: 285 FHMKDINS-FDSVPVLTMKHSS--------------DCYKDPYDLTIEVVETDL-PNGIE 328

Query: 343 NSDTRDG-EVNGALHEGKADAEEHGVATPDLLMFDNLEEECEIFHLRIIHRKNRTGFEEN 401
           + + RD  ++N  LH  +  A+     T D L+    ++E E+F LRI+HRKNRTGFEEN
Sbjct: 329 SYEVRDDRDLNEELHVPEVAADGEDNNTDDDLLKYIQDDEYEVFELRIVHRKNRTGFEEN 388

Query: 402 KDLPIILNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEI 461
           K++PI+LN+V+AGRYYVTEYLGSAAFS+V QA DL  G+DVCLKIIKNDKDFFDQSLDEI
Sbjct: 389 KEVPIVLNSVMAGRYYVTEYLGSAAFSRVVQAHDLQMGIDVCLKIIKNDKDFFDQSLDEI 448

Query: 462 KLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLG 521
           KLLKLVNK+DP D+HHILRLYDYFYH EHLFIV ELLRANLYEFQKFNQESGGEAYFTL 
Sbjct: 449 KLLKLVNKHDPGDKHHILRLYDYFYHQEHLFIVTELLRANLYEFQKFNQESGGEAYFTLK 508

Query: 522 RLQVCSTFLLTLLMLIFLLLVIY 544
           RLQ+ +   L  L  +  L +++
Sbjct: 509 RLQLITRQCLEALQYLHNLGIVH 531

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|226506060|ref|NP_001148168.1| ATP binding protein [Zea mays] gi|195616354|gb|ACG30007.1| ATP binding protein [Zea mays] gi|414879861|tpg|DAA56992.1| TPA: putative protein kinase superfamily protein [Zea mays]

 Score =  307 bits (787), Expect = 9e-81,   Method: Compositional matrix adjust.
 Identities = 234/596 (39%), Positives = 302/596 (50%), Gaps = 104/596 (17%)

Query: 4   VSSSDVETVIEFLRKNGFKEAESALKEDMMEKIRDLGSFDYEKFLFPVLPPVKIPASLRQ 63
           +++  ++ V+ FL  +GF  A SAL++D++E+    G   ++  L P LPP+++PAS   
Sbjct: 1   MAAPGLDKVMAFLTDHGFAGAASALRDDVLERTA-AGDESHDAALDPHLPPLRMPASAGG 59

Query: 64  TEVDEGGADRSSRSSSASSSDDDE------FVSLASSTSDLCSSEFTNPYGLRSTSHGNS 117
                G    +   + AS            FVSL S+ S L      NPYGL S  H  S
Sbjct: 60  AGAGAGAGAGAGTPTPASPGSSSGSASSSAFVSLRSTPSGL-----LNPYGLWSPRHSQS 114

Query: 118 EASSESLSQFDTARDYDLQNDFYWHDEKDEGYFMTPSYGGSDFFGCPSEDKFIMTSEADR 177
           +ASS  + +F TAR YD  + F+   ++D  Y                          D 
Sbjct: 115 DASSSEM-EFGTARQYDTTDLFF---QEDWLY-------------------------DDH 145

Query: 178 LFENPLAVYDQSEGLHSEASTDYLDKPCLFHIVPLNDDKEVGVTDYYRFEKTNQPEAGGI 237
           LF + L   D       +   D  D      I       ++G    +R E       GG 
Sbjct: 146 LFPSKLDDEDDEGKEEDKFVLDAHDGSEQVEI------GKLGAGHNHRHEHI-----GG- 193

Query: 238 KEKLKDCA-AYGCSEPLCKCCAGEGKINN-DYGYLSSKEA----DLIDLQHNVVGDSSTD 291
            ++ + CA  Y CS PLC CC G  K +  D    SS        ++D Q  ++ D + D
Sbjct: 194 -DRCEGCAEVYICSSPLCGCCGGGLKNDGLDVARSSSSTVYGRYKIMDDQTEILDDCAQD 252

Query: 292 -------------CDLAPHPG----------TEKS----SSYSSSKRGSSIDWIEG--FK 322
                        C +   PG           EK     SS+ +     + D+ E     
Sbjct: 253 AFQLKQSRDIMFECGMTRDPGRGYDDSGLSVVEKELQILSSFDTVVNHGTYDFTENGELN 312

Query: 323 GSSDLHFKGAEKDLMP-----------AEIDNSD--TRDGEVNGAL-HEGKADAEEHGVA 368
           GS D + K +     P            ++D +D     G +N  + H     AEE    
Sbjct: 313 GSCDKNLKSSIHKEYPKGHRIQPFPESGDLDEADEFRHVGSLNTDVQHSTALKAEEDAET 372

Query: 369 TPDLLMFDNLEEECEIFHLRIIHRKNRTGFEENKDLPIILNTVIAGRYYVTEYLGSAAFS 428
             DL + D    E E+F LRIIHRKNRTGFEENKD PI+LN+V+AGRYY+TEYLGSAAFS
Sbjct: 373 NIDLALSD-FHREYEVFELRIIHRKNRTGFEENKDFPIVLNSVVAGRYYITEYLGSAAFS 431

Query: 429 KVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL 488
           KV QA DL TG+DVCLKIIKNDKDFFDQSLDEIKLLK VNK DP DEHH+LRLYDYFYH 
Sbjct: 432 KVVQAHDLRTGMDVCLKIIKNDKDFFDQSLDEIKLLKFVNKYDPLDEHHVLRLYDYFYHQ 491

Query: 489 EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIY 544
           EHLFIV ELLRANLYEFQK+NQESGGE YFTL R+QV +   L  L+ +  L +I+
Sbjct: 492 EHLFIVTELLRANLYEFQKYNQESGGEVYFTLPRIQVIARQCLEALVYLHRLRIIH 547

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357125722|ref|XP_003564539.1| PREDICTED: dual specificity protein kinase YAK1-like isoform 2 [Brachypodium distachyon]

 Score =  302 bits (774), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 226/593 (38%), Positives = 296/593 (49%), Gaps = 108/593 (18%)

Query: 4   VSSSDVETVIEFLRKNGFKEAESALKEDMMEKIRDLGSFDYEKFLFPVLPPVKIPASLRQ 63
           +++  ++ V+ FL ++GF    SAL++D++++  D G  D    L P LPP+++PAS   
Sbjct: 1   MAAPGLDEVMAFLTEHGFASTASALRDDVLDRSAD-GESDSTATLGPQLPPLRLPASASG 59

Query: 64  TEVDEGGADRSSRSSSASSSDDDEFVSLASSTSDLCSSEFTNPYGLRSTSHGNSEASSES 123
                   +  +   S+S+S      S A  +     S   NPYG+ S  H  S+ SS  
Sbjct: 60  GAGGGVALEAPASPGSSSNSA----SSSAFVSMSSSPSGLLNPYGVWSPPHSQSDGSSSE 115

Query: 124 LSQFDTARDYDLQNDFY---WHDEKDEGYFMTPSYGGSDFFGCPSEDKFIMTSEADRLFE 180
           + +F TAR YD  + F+   W  + D  +   P   G D      EDKF+          
Sbjct: 116 M-EFGTARQYDTTDLFFQEGWLYD-DHLFHSKPDDDGRD----KEEDKFVHGGSG----- 164

Query: 181 NPLAVYDQSEGLHSEASTDYLDKPCLFHIVPLNDDKEVGVTDYYRFEKTNQPEAGGIKEK 240
                  ++E L                ++  +DD+        R E        G  E 
Sbjct: 165 -------RTEML----------------VLNADDDR--------RHEHAGNNSCEGCAE- 192

Query: 241 LKDCAAYGCSEPLCKCCAGEGK---------------------INNDYGYLSSKEADLID 279
                 Y CS PLC CC GE K                     +++    L     DL  
Sbjct: 193 -----VYTCSSPLCGCCGGELKNEEGLQVVSNSSSVVYGRYKVMDDQTEILDECGLDLFQ 247

Query: 280 LQHNVVGDSSTDCDLAPHPGT-----EKSSSYSSSKRGSSIDWI---------------E 319
           L+ +V  DS  +CDL   PG      E +      +  SS D                  
Sbjct: 248 LKQSV--DSVLECDLPRDPGQGDEHLELNVVEKELQMLSSFDRFIPHVTDNIKLHDSTEN 305

Query: 320 GFKGSSDLHFKGAEKDLMPAEIDNSDTRD-------GEVNGALHEGKA-DAEEHGVATPD 371
             + SSD  +      L P   ++ D  D       G +N  +    A  AE+  + +  
Sbjct: 306 NLESSSDKEYLKESYSLHPFP-ESGDPDDPYEFGDIGPLNTGVKSSTALIAEKEDMESNI 364

Query: 372 LLMFDNLEEECEIFHLRIIHRKNRTGFEENKDLPIILNTVIAGRYYVTEYLGSAAFSKVF 431
            L   N + E E+F LRI+HRKNRTGFEENKD PI+LN+VIAGRYYVTEYLGSAAFSKV 
Sbjct: 365 DLALSNFQREYEVFELRIVHRKNRTGFEENKDFPIVLNSVIAGRYYVTEYLGSAAFSKVV 424

Query: 432 QAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 491
           QA DL TG+DVCLKIIKNDKDFFDQSLDEIKLLK VNK DP+DEHH+LRLYDYFYH EHL
Sbjct: 425 QAHDLQTGIDVCLKIIKNDKDFFDQSLDEIKLLKFVNKYDPSDEHHVLRLYDYFYHQEHL 484

Query: 492 FIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIY 544
           FIV ELLRANLYEFQK+NQE GGE YFTL R+QV +   L  L+ +  L +++
Sbjct: 485 FIVTELLRANLYEFQKYNQEFGGEVYFTLPRIQVIARQCLEALVYLHHLRIVH 537

Source: Brachypodium distachyon

Species: Brachypodium distachyon

Genus: Brachypodium

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|413952032|gb|AFW84681.1| putative protein kinase superfamily protein, partial [Zea mays]

 Score =  300 bits (769), Expect = 9e-79,   Method: Compositional matrix adjust.
 Identities = 224/596 (37%), Positives = 301/596 (50%), Gaps = 105/596 (17%)

Query: 4   VSSSDVETVIEFLRKNGFKEAESALKEDMMEKIRDLGSFDYEKFLFPVLPPVKIPASLRQ 63
           +++  ++ V+ FL  +GF  A SAL++D++ +    G   ++  L P LPP+++PA+   
Sbjct: 1   MAAPGLDQVMAFLTDHGFAGAASALRDDVLARTA-AGDEGHDAALGPRLPPLRMPAAGTG 59

Query: 64  TEVDEGGADRSSRSSSASSSDDDE--FVSLASSTSDLCSSEFTNPYGLRSTSHGNSEASS 121
           +    G    +  S  +SS       FVS+ S+ S L      NPYGL S  H  S+ SS
Sbjct: 60  SGSGAGSGTPAPASPGSSSGSASSSAFVSMRSTPSGL-----LNPYGLWSPRHSQSDVSS 114

Query: 122 ESLSQFDTARDYDLQNDFYWHDEKDEGYFMTPSYGGSDFFGCPSEDKFIMTSEADRLFEN 181
             + +F TAR YD  + F+  D   + +   PS    +      EDKF++ +        
Sbjct: 115 SEM-EFGTARQYDTTDLFFQEDWLYDDHLF-PSKLDDEDDEREEEDKFVLDA-------- 164

Query: 182 PLAVYDQSEGLHSEASTDYLDKPCLFHIVPLNDDKEVGVTDYYRFEKTNQPEAGGIKEKL 241
                      H  AS                +  ++G    +R E       GG  ++ 
Sbjct: 165 -----------HGGASAQ-------------TEIGKLGAGHNHRHEHI-----GG--DRC 193

Query: 242 KDCA-AYGCSEPLCKCCAGEGKINNDYGYLSSKEADLIDLQHNVV--------------- 285
           + CA  Y CS PLC CC G   + ND  +++   +  +  ++ ++               
Sbjct: 194 EGCAEVYTCSSPLCGCCGG--GLKNDGLHVARSSSSTVYGRYQIMDDRTETMDDCAQDGF 251

Query: 286 -----GDSSTDCDLAPHPG----------TEKSSSYSSSKRGSSID--WIEGFKGSSDL- 327
                GD   +C +   PG           EK     SS    ++    +  F  + DL 
Sbjct: 252 QLKQSGDIMFECGMQRDPGRGDDDSDLSVVEKELQMLSSFDTDAVTNHGVHDFTDNGDLN 311

Query: 328 --------------HFKGAEKDLMPAEIDNSDTRDGEVNGAL-----HEGKADAEEHGVA 368
                         + KG      P   D  +  +    G+L     H    +AEE    
Sbjct: 312 GICDKNPKISIDKEYLKGHRIQPFPEIGDPDEAYEFRNVGSLNADVQHSTALEAEEDAET 371

Query: 369 TPDLLMFDNLEEECEIFHLRIIHRKNRTGFEENKDLPIILNTVIAGRYYVTEYLGSAAFS 428
             DL + D    E E+F LRIIHRKNRTGFEENKD PI+LN+V+AGRY +TEYLGSAAFS
Sbjct: 372 NIDLALSD-FHREYEVFELRIIHRKNRTGFEENKDFPIVLNSVVAGRYCITEYLGSAAFS 430

Query: 429 KVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL 488
           KV QA DL TG+DVCLKIIKNDKDFFDQSLDEIKLLK VNK DP DEHH+LRLYDYFYH 
Sbjct: 431 KVVQAHDLQTGMDVCLKIIKNDKDFFDQSLDEIKLLKFVNKYDPLDEHHVLRLYDYFYHQ 490

Query: 489 EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIY 544
           EHLFIV ELLRANLYEFQK+NQESGGE YFTL R+QV +   L  L+ +  L +I+
Sbjct: 491 EHLFIVTELLRANLYEFQKYNQESGGEVYFTLPRIQVIARQCLEALVYLHHLRIIH 546

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|212275250|ref|NP_001130373.1| uncharacterized protein LOC100191468 [Zea mays] gi|194688960|gb|ACF78564.1| unknown [Zea mays]

 Score =  300 bits (769), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 224/596 (37%), Positives = 301/596 (50%), Gaps = 105/596 (17%)

Query: 4   VSSSDVETVIEFLRKNGFKEAESALKEDMMEKIRDLGSFDYEKFLFPVLPPVKIPASLRQ 63
           +++  ++ V+ FL  +GF  A SAL++D++ +    G   ++  L P LPP+++PA+   
Sbjct: 1   MAAPGLDQVMAFLTDHGFAGAASALRDDVLARTA-AGDEGHDAALGPRLPPLRMPAAGTG 59

Query: 64  TEVDEGGADRSSRSSSASSSDDDE--FVSLASSTSDLCSSEFTNPYGLRSTSHGNSEASS 121
           +    G    +  S  +SS       FVS+ S+ S L      NPYGL S  H  S+ SS
Sbjct: 60  SGSGAGSGTPAPASPGSSSGSASSSAFVSMRSTPSGL-----LNPYGLWSPRHSQSDVSS 114

Query: 122 ESLSQFDTARDYDLQNDFYWHDEKDEGYFMTPSYGGSDFFGCPSEDKFIMTSEADRLFEN 181
             + +F TAR YD  + F+  D   + +   PS    +      EDKF++ +        
Sbjct: 115 SEM-EFGTARQYDTTDLFFQEDWLYDDHLF-PSKLDDEDDEREEEDKFVLDA-------- 164

Query: 182 PLAVYDQSEGLHSEASTDYLDKPCLFHIVPLNDDKEVGVTDYYRFEKTNQPEAGGIKEKL 241
                      H  AS                +  ++G    +R E       GG  ++ 
Sbjct: 165 -----------HGGASAQ-------------TEIGKLGAGHNHRHEHI-----GG--DRC 193

Query: 242 KDCA-AYGCSEPLCKCCAGEGKINNDYGYLSSKEADLIDLQHNVV--------------- 285
           + CA  Y CS PLC CC G   + ND  +++   +  +  ++ ++               
Sbjct: 194 EGCAEVYTCSSPLCGCCGG--GLKNDGLHVARSSSSTVYGRYQIMDDRTETMDDCAQDGF 251

Query: 286 -----GDSSTDCDLAPHPG----------TEKSSSYSSSKRGSSID--WIEGFKGSSDL- 327
                GD   +C +   PG           EK     SS    ++    +  F  + DL 
Sbjct: 252 QLKQSGDIMFECGMQRDPGRGDDDSDLSVVEKELQMLSSFDTDAVTNHGVHDFTDNGDLN 311

Query: 328 --------------HFKGAEKDLMPAEIDNSDTRDGEVNGAL-----HEGKADAEEHGVA 368
                         + KG      P   D  +  +    G+L     H    +AEE    
Sbjct: 312 GICDKNPKISIDKEYLKGHRIQPFPEIGDPDEAYEFRNVGSLNADVQHSTALEAEEDAET 371

Query: 369 TPDLLMFDNLEEECEIFHLRIIHRKNRTGFEENKDLPIILNTVIAGRYYVTEYLGSAAFS 428
             DL + D    E E+F LRIIHRKNRTGFEENKD PI+LN+V+AGRY +TEYLGSAAFS
Sbjct: 372 NIDLALSD-FHREYEVFELRIIHRKNRTGFEENKDFPIVLNSVVAGRYCITEYLGSAAFS 430

Query: 429 KVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL 488
           KV QA DL TG+DVCLKIIKNDKDFFDQSLDEIKLLK VNK DP DEHH+LRLYDYFYH 
Sbjct: 431 KVVQAHDLQTGMDVCLKIIKNDKDFFDQSLDEIKLLKFVNKYDPLDEHHVLRLYDYFYHQ 490

Query: 489 EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIY 544
           EHLFIV ELLRANLYEFQK+NQESGGE YFTL R+QV +   L  L+ +  L +I+
Sbjct: 491 EHLFIVTELLRANLYEFQKYNQESGGEVYFTLPRIQVIARQCLEALVYLHHLRIIH 546

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357125720|ref|XP_003564538.1| PREDICTED: dual specificity protein kinase YAK1-like isoform 1 [Brachypodium distachyon]

 Score =  300 bits (767), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 228/601 (37%), Positives = 294/601 (48%), Gaps = 113/601 (18%)

Query: 4   VSSSDVETVIEFLRKNGFKEAESALKEDMMEKIRDLGSFDYEKFLFPVLPPVKIPASLRQ 63
           +++  ++ V+ FL ++GF    SAL++D++++  D G  D    L P LPP+++PAS   
Sbjct: 1   MAAPGLDEVMAFLTEHGFASTASALRDDVLDRSAD-GESDSTATLGPQLPPLRLPASASG 59

Query: 64  TEVDEGGADRSSRSSSASSSDDDEFVSLASSTSDLCSSEFTNPYGLRSTSHGNSEASSES 123
                   +  +   S+S+S      S A  +     S   NPYG+ S  H  S+ SS  
Sbjct: 60  GAGGGVALEAPASPGSSSNSA----SSSAFVSMSSSPSGLLNPYGVWSPPHSQSDGSSSE 115

Query: 124 LSQFDTARDYDLQNDFYWHDEKDEGYFMTPSYGGSDFFGCPSEDKFIMTSEADRLFENPL 183
           + +F TAR YD  + F+      EG+     Y    F   P +D      E D+      
Sbjct: 116 M-EFGTARQYDTTDLFF-----QEGWL----YDDHLFHSKPDDDG--RDKEEDKFVHG-- 161

Query: 184 AVYDQSEGLHSEASTDYLDKPCLFHIVPLNDDKEVGVTDYYRFEKTNQPEAGGIKEKLKD 243
                         T+ L       ++  +DD+        R E        G  E    
Sbjct: 162 ----------GSGRTEML-------VLNADDDR--------RHEHAGNNSCEGCAE---- 192

Query: 244 CAAYGCSEPLCKCCAGEGK---------------------INNDYGYLSSKEADLIDLQH 282
              Y CS PLC CC GE K                     +++    L     DL  L+ 
Sbjct: 193 --VYTCSSPLCGCCGGELKNEEGLQVVSNSSSVVYGRYKVMDDQTEILDECGLDLFQLKQ 250

Query: 283 NVVGDSSTDCDLAPHPG----------TEKSSSYSSSKRGSSIDWIEGFKG--------- 323
           +V  DS  +CDL   PG           EK     SS      D I    G         
Sbjct: 251 SV--DSVLECDLPRDPGQGDEHLELNVVEKELQMLSSFDSYGDDDIVANPGFIPHVTDNI 308

Query: 324 ------------SSDLHFKGAEKDLMPAEIDNSDTRD-------GEVNGALHEGKA-DAE 363
                       SSD  +      L P   ++ D  D       G +N  +    A  AE
Sbjct: 309 KLHDSTENNLESSSDKEYLKESYSLHPFP-ESGDPDDPYEFGDIGPLNTGVKSSTALIAE 367

Query: 364 EHGVATPDLLMFDNLEEECEIFHLRIIHRKNRTGFEENKDLPIILNTVIAGRYYVTEYLG 423
           +  + +   L   N + E E+F LRI+HRKNRTGFEENKD PI+LN+VIAGRYYVTEYLG
Sbjct: 368 KEDMESNIDLALSNFQREYEVFELRIVHRKNRTGFEENKDFPIVLNSVIAGRYYVTEYLG 427

Query: 424 SAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYD 483
           SAAFSKV QA DL TG+DVCLKIIKNDKDFFDQSLDEIKLLK VNK DP+DEHH+LRLYD
Sbjct: 428 SAAFSKVVQAHDLQTGIDVCLKIIKNDKDFFDQSLDEIKLLKFVNKYDPSDEHHVLRLYD 487

Query: 484 YFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVI 543
           YFYH EHLFIV ELLRANLYEFQK+NQE GGE YFTL R+QV +   L  L+ +  L ++
Sbjct: 488 YFYHQEHLFIVTELLRANLYEFQKYNQEFGGEVYFTLPRIQVIARQCLEALVYLHHLRIV 547

Query: 544 Y 544
           +
Sbjct: 548 H 548

Source: Brachypodium distachyon

Species: Brachypodium distachyon

Genus: Brachypodium

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359486399|ref|XP_002272072.2| PREDICTED: probable serine/threonine-protein kinase dyrk2 [Vitis vinifera]

 Score =  297 bits (761), Expect = 8e-78,   Method: Compositional matrix adjust.
 Identities = 148/198 (74%), Positives = 167/198 (84%), Gaps = 1/198 (0%)

Query: 348 DGEVNGALHEGKADAEEHGVATPD-LLMFDNLEEECEIFHLRIIHRKNRTGFEENKDLPI 406
           DGEV G  +E +A+ ++   AT D LLM++N E+E E+F+LRIIHRKNRTGFEENKDLPI
Sbjct: 210 DGEVAGECYEPEANVDDQEGATADELLMYENQEDEYEVFNLRIIHRKNRTGFEENKDLPI 269

Query: 407 ILNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKL 466
           +LNTV+AGRYY+TEYLGSAAFSKV QA DL TG+DVCLKIIKNDKDFFDQSLDEIKLLK 
Sbjct: 270 VLNTVLAGRYYITEYLGSAAFSKVVQAHDLQTGMDVCLKIIKNDKDFFDQSLDEIKLLKY 329

Query: 467 VNKNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVC 526
           VNK+DPADE HILRLYDYFYH EHLFIVCELLRANLYEFQKFNQESGGE YFTL RLQV 
Sbjct: 330 VNKHDPADERHILRLYDYFYHQEHLFIVCELLRANLYEFQKFNQESGGETYFTLKRLQVI 389

Query: 527 STFLLTLLMLIFLLLVIY 544
           +   L  L  +  L +I+
Sbjct: 390 TRQCLEALEYLHDLGIIH 407

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	552
TAIR|locus:2047741	570	AT2G40120 [Arabidopsis thalian	0.295	0.285	0.797	9.5e-103
TAIR|locus:2206840	1169	AT1G73460 [Arabidopsis thalian	0.358	0.169	0.611	2.3e-65
TAIR|locus:2206855	1152	AT1G73450 [Arabidopsis thalian	0.353	0.169	0.616	1.2e-64
TAIR|locus:2089774	1138	AT3G17750 [Arabidopsis thalian	0.264	0.128	0.753	6.7e-64
POMBASE|SPAC823.03	534	ppk15 "serine/threonine protei	0.211	0.219	0.422	3.6e-16
ASPGD|ASPL0000065013	885	AN7104 [Emericella nidulans (t	0.217	0.135	0.407	1.2e-14
SGD|S000003677	807	YAK1 "Serine-threonine protein	0.219	0.149	0.385	1.7e-14
POMBASE|SPAC2F7.03c	1087	pom1 "DYRK family protein kina	0.211	0.107	0.406	2.9e-14
TAIR|locus:2162868	956	YAK1 "yeast YAK1-related gene	0.217	0.125	0.401	4.7e-14
UNIPROTKB|D4A0W8	597	Dyrk4 "Protein Dyrk4" [Rattus	0.230	0.212	0.348	1.2e-13

TAIR|locus:2047741 AT2G40120 [Arabidopsis thaliana (taxid:3702)]

 Score = 691 (248.3 bits), Expect = 9.5e-103, Sum P(2) = 9.5e-103
 Identities = 130/163 (79%), Positives = 144/163 (88%)

Query:   363 EEHGVATPDLLMFDNLEEECEIFHLRIIHRKNRTGFEENKDLPIILNTVIAGRYYVTEYL 422
             ++  V   ++ +   +E+E E+F+LRIIH KNRTGFEENKDLPI++NTVI GRYY+TEY+
Sbjct:   208 DQLNVTDEEVDVVHEVEDEYEVFNLRIIHWKNRTGFEENKDLPIVINTVIGGRYYITEYI 267

Query:   423 GSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLY 482
             GSAAFSKV QAQDLH GVDVCLKIIKNDKDFFDQSLDEIKLLK VNK+DPADEHHILRLY
Sbjct:   268 GSAAFSKVVQAQDLHNGVDVCLKIIKNDKDFFDQSLDEIKLLKHVNKHDPADEHHILRLY 327

Query:   483 DYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQV 525
             DYFYH EHLFIVCELLRANLYEFQKFNQESGGE YF L RLQV
Sbjct:   328 DYFYHQEHLFIVCELLRANLYEFQKFNQESGGEPYFNLSRLQV 370

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;IDA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005737 "cytoplasm" evidence=IDA

GO:0046777 "protein autophosphorylation" evidence=IDA

TAIR|locus:2206840 AT1G73460 [Arabidopsis thaliana (taxid:3702)]

 Score = 614 (221.2 bits), Expect = 2.3e-65, Sum P(3) = 2.3e-65
 Identities = 123/201 (61%), Positives = 149/201 (74%)

Query:   324 SSDLHFKGAEKDLMPAEIDNSDTRDGEVNGALHEGKADAEEHGVATPDLLMFDNLEEECE 383
             SS  ++   E+     E D +D+ + E + A      D EE       +      EEE E
Sbjct:   769 SSLSNYACEERKHADKEDDRNDSSEIEDDNAT---ALDDEEAVAVQEQVRQIKAQEEEFE 825

Query:   384 IFHLRIIHRKNRTGFEENKDLPIILNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVC 443
              F L+I+HRKNRTGFEE K+  ++LN+VIAGRY+VTEYLGSAAFSK  QA DL TG+DVC
Sbjct:   826 TFDLKIVHRKNRTGFEEEKNFNVVLNSVIAGRYHVTEYLGSAAFSKAIQAHDLQTGMDVC 885

Query:   444 LKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCELLRANLY 503
             +KIIKN+KDFFDQSLDEIKLLK VNK+DPAD++H+LRLYDYFY+ EHL IVCELL+ANLY
Sbjct:   886 IKIIKNNKDFFDQSLDEIKLLKYVNKHDPADKYHLLRLYDYFYYREHLLIVCELLKANLY 945

Query:   504 EFQKFNQESGGEAYFTLGRLQ 524
             EF KFN+ESGGE YFT+ RLQ
Sbjct:   946 EFHKFNRESGGEVYFTMPRLQ 966

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005737 "cytoplasm" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

TAIR|locus:2206855 AT1G73450 [Arabidopsis thaliana (taxid:3702)]

 Score = 622 (224.0 bits), Expect = 1.2e-64, Sum P(2) = 1.2e-64
 Identities = 124/201 (61%), Positives = 148/201 (73%)

Query:   324 SSDLHFKGAEKDLMPAEIDNSDTRDGEVNGALHEGKADAEEHGVATPDLLMFDNLEEECE 383
             SS  ++   E+     E D+S+  DG      H    D EE       +      EEE E
Sbjct:   755 SSLSNYARGERKHAEKENDSSEREDG------HATALDDEEAVAVQEQVRQIKAQEEEFE 808

Query:   384 IFHLRIIHRKNRTGFEENKDLPIILNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVC 443
              F L+I+HRKNRTGFEE K+  ++LN+VIAGRY+VTEYLGSAAFSK  QA DL TG+DVC
Sbjct:   809 TFDLKIVHRKNRTGFEEEKNFNVVLNSVIAGRYHVTEYLGSAAFSKAIQAHDLQTGMDVC 868

Query:   444 LKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCELLRANLY 503
             +KIIKN+KDFFDQSLDEIKLLK VNK+DPAD++H+LRLYDYFY+ EHL IVCELL+ANLY
Sbjct:   869 IKIIKNNKDFFDQSLDEIKLLKYVNKHDPADKYHLLRLYDYFYYREHLLIVCELLKANLY 928

Query:   504 EFQKFNQESGGEAYFTLGRLQ 524
             EF KFN+ESGGE YFT+ RLQ
Sbjct:   929 EFHKFNRESGGEVYFTMPRLQ 949

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

TAIR|locus:2089774 AT3G17750 [Arabidopsis thaliana (taxid:3702)]

 Score = 607 (218.7 bits), Expect = 6.7e-64, Sum P(2) = 6.7e-64
 Identities = 110/146 (75%), Positives = 133/146 (91%)

Query:   379 EEECEIFHLRIIHRKNRTGFEENKDLPIILNTVIAGRYYVTEYLGSAAFSKVFQAQDLHT 438
             E++ E F+L+I+HRKNRTGFEE+K+  ++LN+VIAGRY+VTE+LGSAAFSK  QA DLHT
Sbjct:   790 EQDFETFNLKIVHRKNRTGFEEDKNFHVVLNSVIAGRYHVTEHLGSAAFSKAIQAHDLHT 849

Query:   439 GVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCELL 498
             G+DVC+KIIKN+KDFFDQSLDEIKLLK VN++DPAD++H+LRLYDYFY  EHL IVCELL
Sbjct:   850 GIDVCVKIIKNNKDFFDQSLDEIKLLKYVNQHDPADKYHLLRLYDYFYFREHLLIVCELL 909

Query:   499 RANLYEFQKFNQESGGEAYFTLGRLQ 524
             +ANLYEFQKFN+ESGGE YFT+ RLQ
Sbjct:   910 KANLYEFQKFNRESGGEVYFTMPRLQ 935

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

POMBASE|SPAC823.03 ppk15 "serine/threonine protein kinase Ppk15 (predicted)" [Schizosaccharomyces pombe (taxid:4896)]

 Score = 230 (86.0 bits), Expect = 3.6e-16, P = 3.6e-16
 Identities = 52/123 (42%), Positives = 74/123 (60%)

Query:   397 GFEE-NKDLPIILNTVIA---GR-YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK 451
             GF+  N D  + +N ++    GR Y + + LG   F +V + QDL T   V +K+IKN  
Sbjct:   106 GFDNVNHDYVLYVNDLLGTDEGRKYLILDTLGHGTFGQVARCQDLKTQQIVAIKVIKNKP 165

Query:   452 DFFDQSLDEIKLLKLVN-KNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQ 510
              F++Q + E+ +L+L+N K DP D+ H++RLYD F H  HL +V ELL  NLYE  K NQ
Sbjct:   166 AFYNQCVMEVSILELLNNKYDPEDKRHLIRLYDQFMHKNHLCLVFELLSINLYELIKQNQ 225

Query:   511 ESG 513
               G
Sbjct:   226 FRG 228

GO:0004674 "protein serine/threonine kinase activity" evidence=ISM

GO:0005524 "ATP binding" evidence=ISM

GO:0005829 "cytosol" evidence=IDA

GO:0006468 "protein phosphorylation" evidence=ISM

GO:0007165 "signal transduction" evidence=NAS

GO:0044732 "mitotic spindle pole body" evidence=IDA

GO:0051286 "cell tip" evidence=IDA

GO:0051519 "activation of bipolar cell growth" evidence=IMP

ASPGD|ASPL0000065013 AN7104 [Emericella nidulans (taxid:162425)]

 Score = 220 (82.5 bits), Expect = 1.2e-14, P = 1.2e-14
 Identities = 53/130 (40%), Positives = 77/130 (59%)

Query:   393 KNRTGFE-ENKDLPIILNTVI----AG---RYYVTEYLGSAAFSKVFQAQDLHTGVDVCL 444
             KN  G++ E+ D  + +N ++    AG   RY + + LG   F +V + Q+L T   V +
Sbjct:   311 KN-DGYDNEDSDYILYVNDILGSEEAGHKNRYLILDVLGQGTFGQVVKCQNLKTQEVVAV 369

Query:   445 KIIKNDKDFFDQSLDEIKLLKLVNKN-DPADEHHILRLYDYFYHLEHLFIVCELLRANLY 503
             K+IKN   +F+QS+ E+ +L L+N   D  D+HH+LRL D F H +HL +V ELL  NLY
Sbjct:   370 KVIKNKTAYFNQSMMEVSVLDLLNSRYDKNDDHHLLRLKDTFIHRQHLCLVFELLSVNLY 429

Query:   504 EFQKFNQESG 513
             E  K NQ  G
Sbjct:   430 ELIKQNQFRG 439

GO:0005634 "nucleus" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

SGD|S000003677 YAK1 "Serine-threonine protein kinase" [Saccharomyces cerevisiae (taxid:4932)]

 Score = 218 (81.8 bits), Expect = 1.7e-14, P = 1.7e-14
 Identities = 49/127 (38%), Positives = 74/127 (58%)

Query:   393 KNRTGFEE-NKDLPIILNTVIA----GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKII 447
             K   GF+  N D  + +N V+      +Y V + LG   F +V + Q+L T   + +K++
Sbjct:   341 KCNNGFDNINSDYILYVNDVLGVEQNRKYLVLDILGQGTFGQVVKCQNLLTKEILAVKVV 400

Query:   448 KNDKDFFDQSLDEIKLLKLVN-KNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQ 506
             K+  ++  QS+ E K+L+L+N K DP ++HH LR+YD F H  HL +V ELL  NLYE  
Sbjct:   401 KSRTEYLTQSITEAKILELLNQKIDPTNKHHFLRMYDSFVHKNHLCLVFELLSNNLYELL 460

Query:   507 KFNQESG 513
             K N+  G
Sbjct:   461 KQNKFHG 467

GO:0004672 "protein kinase activity" evidence=IEA;IDA

GO:0005634 "nucleus" evidence=IEA;IDA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA;IMP;IDA

GO:0004712 "protein serine/threonine/tyrosine kinase activity" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA;IDA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA;IMP;IDA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;IMP;IDA

GO:0016301 "kinase activity" evidence=IEA

GO:0016310 "phosphorylation" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

POMBASE|SPAC2F7.03c pom1 "DYRK family protein kinase Pom1" [Schizosaccharomyces pombe (taxid:4896)]

 Score = 220 (82.5 bits), Expect = 2.9e-14, Sum P(2) = 2.9e-14
 Identities = 48/118 (40%), Positives = 71/118 (60%)

Query:   397 GFEENK-DLPIILNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFD 455
             GF++ + D  ++L   IA RY V ++LG  +F +V +  D  TG  V LKII+N K F  
Sbjct:   679 GFDDERGDYKVVLGDHIAYRYEVVDFLGKGSFGQVLRCIDYETGKLVALKIIRNKKRFHM 738

Query:   456 QSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESG 513
             Q+L E K+L+ + + DP DE+ +++  D+FY  +HL +  ELL  NLYE  K N   G
Sbjct:   739 QALVETKILQKIREWDPLDEYCMVQYTDHFYFRDHLCVATELLGKNLYELIKSNGFKG 796

GO:0000753 "cell morphogenesis involved in conjugation with cellular fusion" evidence=IMP

GO:0004674 "protein serine/threonine kinase activity" evidence=IDA

GO:0004712 "protein serine/threonine/tyrosine kinase activity" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0005524 "ATP binding" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IDA

GO:0007165 "signal transduction" evidence=IDA

GO:0008361 "regulation of cell size" evidence=IGI

GO:0010972 "negative regulation of G2/M transition of mitotic cell cycle" evidence=IGI;IMP

GO:0030427 "site of polarized growth" evidence=IDA

GO:0030428 "cell septum" evidence=IEA

GO:0032153 "cell division site" evidence=IDA

GO:0034504 "protein localization to nucleus" evidence=IMP

GO:0034613 "cellular protein localization" evidence=IMP

GO:0035839 "non-growing cell tip" evidence=IDA

GO:0051285 "cell cortex of cell tip" evidence=IDA

GO:0051286 "cell tip" evidence=IDA

GO:0051519 "activation of bipolar cell growth" evidence=IMP

GO:0070650 "actin filament bundle distribution" evidence=TAS

GO:0071343 "negative regulation of establishment of actomyosin contractile ring localization" evidence=TAS

GO:0071574 "protein localization to medial cortex" evidence=IMP

GO:1901648 "regulation of actomyosin contractile ring localization" evidence=IMP

GO:2000769 "regulation of establishment or maintenance of cell polarity regulating cell shape" evidence=IMP

TAIR|locus:2162868 YAK1 "yeast YAK1-related gene 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 215 (80.7 bits), Expect = 4.7e-14, P = 4.7e-14
 Identities = 51/127 (40%), Positives = 69/127 (54%)

Query:   394 NRTGFEE-NKDLPIILNTVIAG-----RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKII 447
             N  GF+  N DL + +N          RY V + LG   F +V +     T   V +K+I
Sbjct:    94 NNDGFDNVNYDLILAVNDDFCSSDSRQRYIVKDLLGHGTFGQVAKCWVPETNSFVAVKVI 153

Query:   448 KNDKDFFDQSLDEIKLLKLVNKN-DPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQ 506
             KN   ++ Q+L E+ +L  +NK  DP D++HI+R+YDYF H  HL I  ELL  NLYE  
Sbjct:   154 KNQLAYYQQALVEVSILTTLNKKYDPEDKNHIVRIYDYFLHQSHLCICFELLDMNLYELI 213

Query:   507 KFNQESG 513
             K NQ  G
Sbjct:   214 KINQFRG 220

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005829 "cytosol" evidence=IDA

GO:0009737 "response to abscisic acid stimulus" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

UNIPROTKB|D4A0W8 Dyrk4 "Protein Dyrk4" [Rattus norvegicus (taxid:10116)]

 Score = 198 (74.8 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
 Identities = 45/129 (34%), Positives = 72/129 (55%)

Query:   387 LRIIHRK-NRTGFEENKDLPI-ILNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCL 444
             L ++  K ++T F++     + +L+  IA RY V + +G  +F +V +  D      V L
Sbjct:   153 LNVVPEKFSKTSFDDEHGSYVKVLHDHIAYRYEVLDMIGKGSFGQVAKCLDHKNNELVAL 212

Query:   445 KIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYE 504
             KII+N K F  Q+L E+K+L+ + + D  + H+++ + D+FY   HL I  ELL  NLYE
Sbjct:   213 KIIRNKKRFHHQALVELKILEALRRKDKDNTHNVVHMKDFFYFRNHLCITFELLGINLYE 272

Query:   505 FQKFNQESG 513
               K N   G
Sbjct:   273 LMKNNSFQG 281

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: estExt_fgenesh4_pg.C_LG_VIII0583 hypothetical protein (726 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	552
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	3e-11
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	1e-09
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	2e-09
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	7e-09
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	1e-08
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	2e-06
cd07831	282	cd07831, STKc_MOK, Catalytic domain of the Serine/	2e-06
cd07830	283	cd07830, STKc_MAK_like, Catalytic domain of Male g	1e-05
cd07834	330	cd07834, STKc_MAPK, Catalytic domain of the Serine	1e-05
cd07832	286	cd07832, STKc_CCRK, Catalytic domain of the Serine	2e-05
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	2e-05
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	2e-05
cd07841	298	cd07841, STKc_CDK7, Catalytic domain of the Serine	3e-05
cd07838	287	cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc	7e-05
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	1e-04
cd07866	311	cd07866, STKc_BUR1, Catalytic domain of the Serine	1e-04
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	2e-04
cd07859	338	cd07859, STKc_TDY_MAPK_plant, Catalytic domain of	3e-04
cd06644	292	cd06644, STKc_STK10_LOK, Catalytic domain of the P	6e-04
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	7e-04
cd06643	282	cd06643, STKc_SLK, Catalytic domain of the Protein	8e-04
cd08224	267	cd08224, STKc_Nek6_Nek7, Catalytic domain of the P	0.001
cd06613	262	cd06613, STKc_MAP4K3_like, Catalytic domain of Mit	0.001
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	0.002
cd07839	284	cd07839, STKc_CDK5, Catalytic domain of the Serine	0.003
cd06608	275	cd06608, STKc_myosinIII_like, Catalytic domain of	0.004

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 63.7 bits (156), Expect = 3e-11
 Identities = 32/86 (37%), Positives = 47/86 (54%), Gaps = 10/86 (11%)

Query: 416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD--FFDQSLDEIKLLKLVNKNDPA 473
           Y + E LG  +F KV+ A+D  TG  V +K+IK  K     ++ L EIK+LK +      
Sbjct: 1   YEILEKLGEGSFGKVYLARDKKTGKLVAIKVIKKKKIKKDRERILREIKILKKLK----- 55

Query: 474 DEH-HILRLYDYFYHLEHLFIVCELL 498
             H +I+RLYD F   + L++V E  
Sbjct: 56  --HPNIVRLYDVFEDEDKLYLVMEYC 79

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 58.0 bits (141), Expect = 1e-09
 Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 9/87 (10%)

Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIK--NDKDFFDQSLDEIKLLKLVNKNDPADEHHIL 479
           LG   F  V+ A+D  TG  V +KIIK  +     ++ L EI++LK +N        +I+
Sbjct: 1   LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNH------PNIV 54

Query: 480 RLYDYFYHLEHLFIVCELL-RANLYEF 505
           +LY  F    HL++V E     +L + 
Sbjct: 55  KLYGVFEDENHLYLVMEYCEGGSLKDL 81

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score = 58.5 bits (142), Expect = 2e-09
 Identities = 32/99 (32%), Positives = 48/99 (48%), Gaps = 11/99 (11%)

Query: 416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD---FFDQSLDEIKLLKLVN-KND 471
           Y     +G   +  V++A+D  TG  V +K IK   +       +L EIKLLK +N  N 
Sbjct: 1   YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPN- 59

Query: 472 PADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQ 510
                 I++L D F H   L++V E +  +LY+  K  Q
Sbjct: 60  ------IIKLLDVFRHKGDLYLVFEFMDTDLYKLIKDRQ 92

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 56.5 bits (137), Expect = 7e-09
 Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 11/82 (13%)

Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIK---NDKDFFDQSLDEIKLLKLVNKNDPADEH-H 477
           LGS +F  V++A+   TG  V +KI+K           +  EI++L+ ++       H +
Sbjct: 7   LGSGSFGTVYKAKHKGTGKIVAVKILKKRSEKSKKDQTARREIRILRRLS-------HPN 59

Query: 478 ILRLYDYFYHLEHLFIVCELLR 499
           I+RL D F   +HL++V E   
Sbjct: 60  IVRLIDAFEDKDHLYLVMEYCE 81

Length = 260

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score = 56.0 bits (136), Expect = 1e-08
 Identities = 28/99 (28%), Positives = 45/99 (45%), Gaps = 11/99 (11%)

Query: 416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD---FFDQSLDEIKLLKLVNKNDP 472
           Y   E LG   +  V++A+D  TG  V LK I+ D +       +L EI LLK +     
Sbjct: 1   YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELK---- 56

Query: 473 ADEH-HILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQ 510
              H +I++L D  +    L++V E    +L ++     
Sbjct: 57  ---HPNIVKLLDVIHTERKLYLVFEYCDMDLKKYLDKRP 92

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score = 48.6 bits (117), Expect = 2e-06
 Identities = 24/87 (27%), Positives = 44/87 (50%), Gaps = 13/87 (14%)

Query: 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIK----NDKDFFDQSLDEIKLLKLVNKN 470
           +Y + + +G  +F KV+  +    G    LK I     ++K+  + +L+E+K+LK +N  
Sbjct: 1   KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKE-REDALNEVKILKKLN-- 57

Query: 471 DPADEH-HILRLYDYFYHLEHLFIVCE 496
                H +I++ Y+ F     L IV E
Sbjct: 58  -----HPNIIKYYESFEEKGKLCIVME 79

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|173735 cd07831, STKc_MOK, Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

 Score = 49.2 bits (118), Expect = 2e-06
 Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 9/96 (9%)

Query: 416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQ--SLDEIKLLKLVNKNDPA 473
           Y +   +G   FS+V +AQ   TG    +K +K      +Q  +L EI+ L+ ++     
Sbjct: 1   YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLS----- 55

Query: 474 DEHHILRLYDYFYHLEH--LFIVCELLRANLYEFQK 507
              +ILRL +  +  +   L +V EL+  NLYE  K
Sbjct: 56  PHPNILRLIEVLFDRKTGRLALVFELMDMNLYELIK 91

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. Length = 282

>gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

 Score = 46.8 bits (112), Expect = 1e-05
 Identities = 27/94 (28%), Positives = 50/94 (53%), Gaps = 7/94 (7%)

Query: 416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQ--SLDEIKLLKLVNKNDPA 473
           Y V + LG   F  V+ A++  TG  V +K +K     +++  +L E+K L+ +N++   
Sbjct: 1   YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHP-- 58

Query: 474 DEHHILRLYDYFYHLEHLFIVCELLRANLYEFQK 507
              +I++L + F   + L+ V E +  NLY+  K
Sbjct: 59  ---NIVKLKEVFRENDELYFVFEYMEGNLYQLMK 89

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283

>gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

 Score = 47.1 bits (113), Expect = 1e-05
 Identities = 31/101 (30%), Positives = 46/101 (45%), Gaps = 22/101 (21%)

Query: 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLD------EIKLLKLVN 468
           RY + + +GS A+  V  A D  TG  V +K I N    FD  +D      EIKLL+ + 
Sbjct: 1   RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISN---VFDDLIDAKRILREIKLLRHLR 57

Query: 469 KNDPADEH-HILRLYDYFYH-----LEHLFIVCELLRANLY 503
                  H +I+ L D            ++IV EL+  +L+
Sbjct: 58  -------HENIIGLLDILRPPSPEDFNDVYIVTELMETDLH 91

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330

>gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

 Score = 46.5 bits (111), Expect = 2e-05
 Identities = 28/95 (29%), Positives = 45/95 (47%), Gaps = 13/95 (13%)

Query: 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKII----KNDKDFFDQSLDEIKLLKLVNKN 470
           RY +   +G  A   VF+A+D  TG  V LK +           +Q+L EIK L+     
Sbjct: 1   RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGG-IPNQALREIKALQAC--- 56

Query: 471 DPADEH-HILRLYDYFYHLEHLFIVCELLRANLYE 504
               +H ++++L D F H     +V E + ++L E
Sbjct: 57  ----QHPYVVKLLDVFPHGSGFVLVMEYMPSDLSE 87

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score = 46.4 bits (111), Expect = 2e-05
 Identities = 22/87 (25%), Positives = 42/87 (48%), Gaps = 8/87 (9%)

Query: 416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLK-LVNKNDPAD 474
           Y   E +G  A  +V++A D  TG +V +K ++  K   +  ++EI ++K   + N    
Sbjct: 21  YKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQNKELIINEILIMKDCKHPN---- 76

Query: 475 EHHILRLYDYFYHLEHLFIVCELLRAN 501
              I+  YD +   + L++V E +   
Sbjct: 77  ---IVDYYDSYLVGDELWVVMEYMDGG 100

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 46.7 bits (109), Expect = 2e-05
 Identities = 22/86 (25%), Positives = 42/86 (48%), Gaps = 12/86 (13%)

Query: 418 VTEYLGSAAFSKVFQAQDLHTGVDVCLKIIK----NDKDFFDQSLDEIKLLKLVNKNDPA 473
           +   LG  +F +V+ A+D      V LK++     +     ++ L EI++L  +N     
Sbjct: 4   ILRKLGEGSFGEVYLARDRKL---VALKVLAKKLESKSKEVERFLREIQILASLN----- 55

Query: 474 DEHHILRLYDYFYHLEHLFIVCELLR 499
              +I++LYD+F     L++V E + 
Sbjct: 56  HPPNIVKLYDFFQDEGSLYLVMEYVD 81

Length = 384

>gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

 Score = 46.0 bits (110), Expect = 3e-05
 Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 14/95 (14%)

Query: 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIK-----NDKDFFDQS-LDEIKLLKLVN 468
           RY   + LG   ++ V++A+D  TG  V +K IK       KD  + + L EIKLL+ + 
Sbjct: 1   RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELK 60

Query: 469 KNDPADEH-HILRLYDYFYHLEHLFIVCELLRANL 502
                  H +I+ L D F H  ++ +V E +  +L
Sbjct: 61  -------HPNIIGLLDVFGHKSNINLVFEFMETDL 88

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298

>gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

 Score = 44.6 bits (106), Expect = 7e-05
 Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 13/90 (14%)

Query: 416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIK--NDKDFFDQS-LDEIKLLKLVNKNDP 472
           Y     +G  A+  V++A+DL+TG  V LK ++    ++    S L EI LLK +     
Sbjct: 1   YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLE---- 56

Query: 473 ADEH-HILRLYD--YFYHLEH---LFIVCE 496
           + EH +I+RL D  +    +    L +V E
Sbjct: 57  SFEHPNIVRLLDVCHGPRTDRELKLTLVFE 86

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 43.7 bits (104), Expect = 1e-04
 Identities = 22/80 (27%), Positives = 43/80 (53%), Gaps = 7/80 (8%)

Query: 420 EYLGSAAFSKVFQAQDLHTGVDVCLKIIK-NDKDFFDQSLDEIKLLKLVNKNDPADEHHI 478
           E +G   F +V++A+   TG +V +K+IK   K+  ++ ++EI++LK           +I
Sbjct: 6   EKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCK------HPNI 59

Query: 479 LRLYDYFYHLEHLFIVCELL 498
           ++ Y  +   + L+IV E  
Sbjct: 60  VKYYGSYLKKDELWIVMEFC 79

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

 Score = 43.8 bits (104), Expect = 1e-04
 Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 11/77 (14%)

Query: 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLK--IIKNDKDFFD-QSLDEIKLLKLVN-K 469
             Y +   LG   F +V++A+ + TG  V LK  ++ N+KD F   +L EIK+LK +   
Sbjct: 8   RDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHP 67

Query: 470 NDPADEHHILRLYDYFY 486
           N       ++ L D   
Sbjct: 68  N-------VVPLIDMAV 77

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score = 42.6 bits (101), Expect = 2e-04
 Identities = 21/85 (24%), Positives = 38/85 (44%), Gaps = 9/85 (10%)

Query: 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKII---KNDKDFFDQSLDEIKLLKLVNKND 471
            Y + + +G  AF  V++  +L TG  V +K I   K  ++     + EI LLK +    
Sbjct: 1   NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLK--- 57

Query: 472 PADEHHILRLYDYFYHLEHLFIVCE 496
                +I++        + L+I+ E
Sbjct: 58  ---HPNIVKYIGSIETSDSLYIILE 79

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|143364 cd07859, STKc_TDY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

 Score = 42.8 bits (101), Expect = 3e-04
 Identities = 33/109 (30%), Positives = 54/109 (49%), Gaps = 10/109 (9%)

Query: 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLD------EIKLLKLVN 468
           RY + E +G  ++  V  A D HTG  V +K I    D F+   D      EIKLL+L+ 
Sbjct: 1   RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKI---NDVFEHVSDATRILREIKLLRLLR 57

Query: 469 KNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAY 517
             D  +  HI+ L       + +++V EL+ ++L++  K N +   E +
Sbjct: 58  HPDIVEIKHIM-LPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHH 105

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. Arabidopsis thaliana contains more TEY-type MAPKs than TDY-type, whereas the reverse is true for Oryza sativa. This subfamily represents the TDY subtype and is composed of Group D plant MAPKs including Arabidopsis thaliana MPK18 (AtMPK18), Oryza sativa Blast- and Wound-induced MAPK1 (OsBWMK1), OsWJUMK1 (Wound- and JA-Uninducible MAPK1), Zea mays MPK6, and the Medicago sativa TDY1 gene product. OsBWMK1 enhances resistance to pathogenic infections. It mediates stress-activated defense responses by activating a transcription factor that affects the expression of stress-related genes. AtMPK18 is involved in microtubule-related functions. Length = 338

>gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

 Score = 41.9 bits (98), Expect = 6e-04
 Identities = 23/78 (29%), Positives = 41/78 (52%), Gaps = 9/78 (11%)

Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKII--KNDKDFFDQSLDEIKLLKLVNKNDPADEHHIL 479
           LG  AF KV++A++  TG     K+I  K++++  D  + EI++L         +  +I+
Sbjct: 20  LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMV-EIEILA------TCNHPYIV 72

Query: 480 RLYDYFYHLEHLFIVCEL 497
           +L   FY    L+I+ E 
Sbjct: 73  KLLGAFYWDGKLWIMIEF 90

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score = 41.4 bits (98), Expect = 7e-04
 Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 20/92 (21%)

Query: 416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIK--NDKDFFD-QSLDEIKLLKLVNKNDP 472
           Y     +G   + +V++A++  TG  V LK I+  N+K+ F   ++ EIKLL+ +     
Sbjct: 1   YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLR---- 56

Query: 473 ADEH-HILRLYDYFYHLEHLFIVCELLRANLY 503
              H +I+RL +         IV    + ++Y
Sbjct: 57  ---HPNIVRLKE---------IVTSKGKGSIY 76

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|132974 cd06643, STKc_SLK, Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

 Score = 41.2 bits (96), Expect = 8e-04
 Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 7/77 (9%)

Query: 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKN-DKDFFDQSLDEIKLLKLVNKNDPADEHHILR 480
           LG  AF KV++AQ+  TGV    K+I    ++  +  + EI +L         D  +I++
Sbjct: 13  LGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILA------SCDHPNIVK 66

Query: 481 LYDYFYHLEHLFIVCEL 497
           L D FY+  +L+I+ E 
Sbjct: 67  LLDAFYYENNLWILIEF 83

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. Length = 282

>gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

 Score = 40.9 bits (96), Expect = 0.001
 Identities = 26/91 (28%), Positives = 38/91 (41%), Gaps = 10/91 (10%)

Query: 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIK----NDKDFFDQSLDEIKLLKLVNK 469
           G + + + +G   FS V++A  L  G  V LK ++     D       L EI LLK    
Sbjct: 2   GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLK---- 57

Query: 470 NDPADEHHILRLYDYFYHLEHLFIVCELLRA 500
               D  ++++    F     L IV EL  A
Sbjct: 58  --QLDHPNVIKYLASFIENNELNIVLELADA 86

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

 Score = 40.7 bits (96), Expect = 0.001
 Identities = 23/83 (27%), Positives = 41/83 (49%), Gaps = 7/83 (8%)

Query: 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIK-NDKDFFDQSLDEIKLLKLVNKNDPA 473
            Y + + +GS  +  V++A+D+ TG  V +K+IK    D F+    EI +LK     +  
Sbjct: 4   DYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPN-- 61

Query: 474 DEHHILRLYDYFYHLEHLFIVCE 496
               I+  +  +   + L+IV E
Sbjct: 62  ----IVAYFGSYLRRDKLWIVME 80

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 40.2 bits (95), Expect = 0.002
 Identities = 23/95 (24%), Positives = 40/95 (42%), Gaps = 21/95 (22%)

Query: 422 LGSAAFSKVFQA----QDLHTGVDVCLKIIKND------KDFFDQSLDEIKLLKLVNKND 471
           LG  AF +V++         T   V +K +K        ++F    L+E  ++K +    
Sbjct: 7   LGEGAFGEVYKGTLKGDGEGTETKVAVKTLKEGASEEEREEF----LEEASIMKKL---- 58

Query: 472 PADEHHILRLYDYFYHLEHLFIVCELLRA-NLYEF 505
                +I+RL       E L+IV E +   +L +F
Sbjct: 59  --SHPNIVRLLGVCTQGEPLYIVTEYMPGGDLLDF 91

Length = 258

>gnl|CDD|143344 cd07839, STKc_CDK5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

 Score = 39.3 bits (92), Expect = 0.003
 Identities = 36/126 (28%), Positives = 59/126 (46%), Gaps = 23/126 (18%)

Query: 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQ-----SLDEIKLLK-LVN 468
           +Y   E +G   +  VF+A++  T   V LK ++ D D  D+     +L EI LLK L +
Sbjct: 1   KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDD--DEGVPSSALREICLLKELKH 58

Query: 469 KNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCST 528
           KN       I+RLYD  +  + L +V E    +L   +K+     G+        ++  +
Sbjct: 59  KN-------IVRLYDVLHSDKKLTLVFEYCDQDL---KKYFDSCNGDI-----DPEIVKS 103

Query: 529 FLLTLL 534
           F+  LL
Sbjct: 104 FMFQLL 109

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also important in synaptic plasticity and learning. CDK5 also participates in protecting against cell death and promoting angiogenesis. Impaired CDK5 activity is implicated in Alzheimer's disease, amyotrophic lateral sclerosis, Parkinson's disease, Huntington's disease and acute neuronal injury. Length = 284

>gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

 Score = 39.2 bits (92), Expect = 0.004
 Identities = 17/74 (22%), Positives = 35/74 (47%), Gaps = 5/74 (6%)

Query: 413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDP 472
            G + + E +G   + KV++A+   TG  V +KI+   +D  ++  +E  +L+       
Sbjct: 5   TGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDEEEEIKEEYNILR-----KY 59

Query: 473 ADEHHILRLYDYFY 486
           ++  +I   Y  F 
Sbjct: 60  SNHPNIATFYGAFI 73

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	552
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	99.95
KOG1290	590	consensus Serine/threonine protein kinase [Signal	99.91
KOG0595	429	consensus Serine/threonine-protein kinase involved	99.89
KOG0575	592	consensus Polo-like serine/threonine protein kinas	99.89
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	99.86
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	99.85
KOG0598	357	consensus Ribosomal protein S6 kinase and related	99.85
KOG0671	415	consensus LAMMER dual specificity kinases [Signal	99.84
KOG0605	550	consensus NDR and related serine/threonine kinases	99.84
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	99.84
KOG0661	538	consensus MAPK related serine/threonine protein ki	99.83
KOG0583	370	consensus Serine/threonine protein kinase [Signal	99.83
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	99.83
KOG0611	668	consensus Predicted serine/threonine protein kinas	99.82
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.82
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.82
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.82
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.81
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.81
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.81
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.81
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	99.81
KOG0581	364	consensus Mitogen-activated protein kinase kinase	99.81
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	99.81
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	99.8
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.8
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.8
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.8
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.79
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.79
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	99.79
PTZ00284	467	protein kinase; Provisional	99.79
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	99.79
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	99.79
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	99.78
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	99.78
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.78
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.78
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	99.78
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.78
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.78
PHA03212	391	serine/threonine kinase US3; Provisional	99.78
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.78
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.78
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.78
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	99.78
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	99.78
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	99.77
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.77
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	99.77
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.77
KOG0610	459	consensus Putative serine/threonine protein kinase	99.77
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.77
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	99.77
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.77
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.77
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.77
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.76
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	99.76
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.76
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.76
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.76
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.76
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.76
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.76
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	99.76
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.76
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.76
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	99.76
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	99.76
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	99.75
KOG0694	694	consensus Serine/threonine protein kinase [Signal	99.75
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.75
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.75
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	99.75
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.75
KOG0670	752	consensus U4/U6-associated splicing factor PRP4 [R	99.75
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.75
PHA03207	392	serine/threonine kinase US3; Provisional	99.75
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.75
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.75
PTZ00036	440	glycogen synthase kinase; Provisional	99.75
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.75
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.75
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.75
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.74
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.74
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.74
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.74
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.74
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.74
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.74
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.74
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	99.74
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.74
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.74
KOG0198	313	consensus MEKK and related serine/threonine protei	99.74
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.74
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.74
KOG0589	426	consensus Serine/threonine protein kinase [General	99.73
PHA03209	357	serine/threonine kinase US3; Provisional	99.73
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	99.73
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	99.73
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.73
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.73
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	99.73
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.73
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	99.73
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.73
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.73
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.73
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.73
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.73
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.73
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.73
KOG0582	516	consensus Ste20-like serine/threonine protein kina	99.73
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.73
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.73
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.73
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.73
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.73
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.73
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.73
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.73
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.73
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.73
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.73
KOG0192	362	consensus Tyrosine kinase specific for activated (	99.73
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.72
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.72
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.72
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.72
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.72
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	99.72
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	99.72
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.72
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.72
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.72
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.72
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.72
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.72
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.72
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.72
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.72
PTZ00267	478	NIMA-related protein kinase; Provisional	99.72
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.72
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.72
PLN00009	294	cyclin-dependent kinase A; Provisional	99.72
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.72
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.72
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.72
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.72
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.72
KOG0586	596	consensus Serine/threonine protein kinase [General	99.71
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.71
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.71
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.71
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	99.71
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.71
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	99.71
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.71
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.71
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.71
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.71
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.71
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.71
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.71
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	99.71
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.71
PHA03211	461	serine/threonine kinase US3; Provisional	99.71
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.71
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.71
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.71
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.71
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.71
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.71
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.71
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.7
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.7
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.7
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	99.7
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.7
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.7
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.7
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.7
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.7
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.7
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	99.7
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.7
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.7
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.7
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.7
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	99.7
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.7
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	99.7
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.7
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.7
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.7
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.7
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	99.7
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.7
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.7
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.7
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	99.7
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.69
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.69
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	99.69
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.69
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.69
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.69
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.69
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.69
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.69
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.69
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.69
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.69
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.69
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.69
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.69
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.69
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.69
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.69
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.69
PTZ00283	496	serine/threonine protein kinase; Provisional	99.68
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.68
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.68
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.68
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.68
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.68
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.68
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.68
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.68
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.68
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.68
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.68
KOG1152	772	consensus Signal transduction serine/threonine kin	99.68
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.68
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.68
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.68
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.68
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.68
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.68
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.68
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.68
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.68
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.68
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.67
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.67
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.67
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.67
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.67
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.67
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.67
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.67
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.67
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.67
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.67
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.67
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.67
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.67
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.67
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.67
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.67
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.67
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	99.67
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.67
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	99.67
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.67
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.67
KOG0578	550	consensus p21-activated serine/threonine protein k	99.67
KOG0662	292	consensus Cyclin-dependent kinase CDK5 [Intracellu	99.67
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.67
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.67
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.66
KOG1989	738	consensus ARK protein kinase family [Signal transd	99.66
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.66
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	99.66
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.66
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	99.66
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.66
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	99.66
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.66
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.66
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.66
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.66
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.66
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.65
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.65
KOG0607	463	consensus MAP kinase-interacting kinase and relate	99.65
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.65
PHA03210	501	serine/threonine kinase US3; Provisional	99.65
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.65
KOG0033	355	consensus Ca2+/calmodulin-dependent protein kinase	99.65
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.65
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.65
KOG4717	864	consensus Serine/threonine protein kinase [Signal	99.65
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.65
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.65
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.65
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.65
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.65
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	99.65
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.64
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.64
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.64
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	99.64
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.64
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.64
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.64
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.64
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.64
KOG0690	516	consensus Serine/threonine protein kinase [Signal	99.64
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.64
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.64
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.64
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.64
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.64
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.63
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.63
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.63
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.63
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.63
KOG0584	632	consensus Serine/threonine protein kinase [General	99.63
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.63
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	99.63
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.63
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.63
KOG1187	361	consensus Serine/threonine protein kinase [Signal	99.63
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	99.63
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.63
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.63
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	99.63
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.62
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.62
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	99.61
KOG0668	338	consensus Casein kinase II, alpha subunit [Signal	99.61
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.61
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.61
KOG0201	467	consensus Serine/threonine protein kinase [Signal	99.61
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.61
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.61
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.61
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.6
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.6
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.6
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.6
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	99.6
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.6
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.6
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	99.6
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.6
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	99.59
PHA02988	283	hypothetical protein; Provisional	99.59
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	99.59
KOG0666	438	consensus Cyclin C-dependent kinase CDK8 [Transcri	99.59
KOG0599	411	consensus Phosphorylase kinase gamma subunit [Carb	99.58
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	99.58
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	99.58
KOG1163	341	consensus Casein kinase (serine/threonine/tyrosine	99.58
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	99.58
KOG1164	322	consensus Casein kinase (serine/threonine/tyrosine	99.57
PRK09188	365	serine/threonine protein kinase; Provisional	99.57
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	99.57
PHA02882	294	putative serine/threonine kinase; Provisional	99.57
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	99.56
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.55
KOG0604	400	consensus MAP kinase-activated protein kinase 2 [S	99.55
KOG0577	948	consensus Serine/threonine protein kinase [Signal	99.55
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	99.54
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	99.54
KOG0608	1034	consensus Warts/lats-like serine threonine kinases	99.53
KOG4721	904	consensus Serine/threonine protein kinase, contain	99.53
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.53
KOG0986	591	consensus G protein-coupled receptor kinase [Signa	99.53
KOG4278	1157	consensus Protein tyrosine kinase [Signal transduc	99.52
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	99.52
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.51
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	99.51
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	99.5
PRK10345	210	hypothetical protein; Provisional	99.5
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	99.49
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.48
KOG0596	677	consensus Dual specificity; serine/threonine and t	99.47
KOG0669	376	consensus Cyclin T-dependent kinase CDK9 [Cell cyc	99.45
KOG0696	683	consensus Serine/threonine protein kinase [Signal	99.45
KOG0695	593	consensus Serine/threonine protein kinase [Signal	99.42
KOG2052	513	consensus Activin A type IB receptor, serine/threo	99.42
KOG1165	449	consensus Casein kinase (serine/threonine/tyrosine	99.41
KOG4645	1509	consensus MAPKKK (MAP kinase kinase kinase) SSK2 a	99.4
smart00090	237	RIO RIO-like kinase.	99.39
KOG1167	418	consensus Serine/threonine protein kinase of the C	99.39
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	99.39
KOG4257	974	consensus Focal adhesion tyrosine kinase FAK, cont	99.37
KOG0576	829	consensus Mitogen-activated protein kinase kinase	99.37
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.37
PLN03224	507	probable serine/threonine protein kinase; Provisio	99.36
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	99.36
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	99.36
KOG0614	732	consensus cGMP-dependent protein kinase [Signal tr	99.34
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	99.32
KOG1025	1177	consensus Epidermal growth factor receptor EGFR an	99.32
PRK14879	211	serine/threonine protein kinase; Provisional	99.3
KOG0200	609	consensus Fibroblast/platelet-derived growth facto	99.29
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	99.28
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.28
KOG1345	378	consensus Serine/threonine kinase [Signal transduc	99.28
KOG3653	534	consensus Transforming growth factor beta/activin	99.26
COG0515	384	SPS1 Serine/threonine protein kinase [General func	99.26
KOG0665	369	consensus Jun-N-terminal kinase (JNK) [Signal tran	99.22
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	99.2
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	99.19
KOG1027	903	consensus Serine/threonine protein kinase and endo	99.17
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	99.17
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	99.16
PRK09605	535	bifunctional UGMP family protein/serine/threonine	99.15
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	99.14
PRK12274	218	serine/threonine protein kinase; Provisional	99.1
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	99.06
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	98.98
KOG1166	974	consensus Mitotic checkpoint serine/threonine prot	98.86
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	98.8
KOG1024	563	consensus Receptor-like protein tyrosine kinase RY	98.45
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	98.35
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	98.35
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	98.32
PLN00181	793	protein SPA1-RELATED; Provisional	98.32
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	98.28
KOG0590	601	consensus Checkpoint kinase and related serine/thr	98.27
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	98.08
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	97.98
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	97.91
KOG1240	1431	consensus Protein kinase containing WD40 repeats [	97.86
KOG3087	229	consensus Serine/threonine protein kinase [General	97.76
KOG1243	690	consensus Protein kinase [General function predict	97.69
KOG4158	598	consensus BRPK/PTEN-induced protein kinase [Signal	97.67
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	97.54
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	97.52
KOG3741	655	consensus Poly(A) ribonuclease subunit [RNA proces	97.47
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	97.35
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	97.22
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	97.21
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	96.97
PF06293	206	Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family;	96.96
PF01636	239	APH: Phosphotransferase enzyme family This family	96.87
PRK09902	216	hypothetical protein; Provisional	96.86
KOG0590	601	consensus Checkpoint kinase and related serine/thr	96.82
COG0478	304	RIO-like serine/threonine protein kinase fused to	96.65
KOG0606	1205	consensus Microtubule-associated serine/threonine	96.34
COG2112	201	Predicted Ser/Thr protein kinase [Signal transduct	96.3
COG1718	268	RIO1 Serine/threonine protein kinase involved in c	95.66
PLN02876	822	acyl-CoA dehydrogenase	95.63
PF10707	199	YrbL-PhoP_reg: PhoP regulatory network protein Yrb	95.55
TIGR02172	226	Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou	95.25
PF13095	207	FTA2: Kinetochore Sim4 complex subunit FTA2	95.24
KOG1266	458	consensus Protein kinase [Signal transduction mech	95.12
PRK10593	297	hypothetical protein; Provisional	95.06
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	94.92
KOG1023	484	consensus Natriuretic peptide receptor, guanylate	94.86
KOG2270	520	consensus Serine/threonine protein kinase involved	94.37
COG0661	517	AarF Predicted unusual protein kinase [General fun	94.15
PF06176	229	WaaY: Lipopolysaccharide core biosynthesis protein	93.15
PRK09550	401	mtnK methylthioribose kinase; Reviewed	92.73
cd05157	235	ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes.	92.7
KOG1033	516	consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati	92.49
KOG1235	538	consensus Predicted unusual protein kinase [Genera	92.3
cd05155	235	APH_ChoK_like_1 Uncharacterized bacterial proteins	89.59
KOG0606	1205	consensus Microtubule-associated serine/threonine	88.62
PF03109	119	ABC1: ABC1 family; InterPro: IPR004147 This entry	88.55
cd05156	302	ChoK_euk Choline Kinase (ChoK) in eukaryotes. The	84.1
KOG2268	465	consensus Serine/threonine protein kinase [Signal	80.76

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=99.95  E-value=5.1e-28  Score=264.26  Aligned_cols=149  Identities=42%  Similarity=0.579  Sum_probs=144.3

Q ss_pred             ccCCCCCcceeeCceecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChhhHHHHHHHHHHHHHhcccCCCCCC
Q 008813          397 GFEENKDLPIILNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEH  476 (552)
Q Consensus       397 gfde~~~y~v~~gdvi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd~~d~p  476 (552)
                      .++++++|.++.++++..||+|++.||+|+||+|.+|+|++|++.||||||++.+.+..+...|++||..|+.+|+.+..
T Consensus       169 ~~~~~~dY~~v~~d~i~~rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~f~~Q~~~Ei~iL~~ln~~d~~~~~  248 (586)
T KOG0667|consen  169 FDDEDGDYQLVVNDHIAYRYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKRFLRQAQIEIRILELLNKHDPDDKY  248 (586)
T ss_pred             CCCCCCceeEEecceeEEEEEEEEEecccccceeEEEEecCCCcEEEEEeeccChHHHHHHHHHHHHHHHHhccCCCCCe
Confidence            45577889999999999999999999999999999999999999999999999999999999999999999988999999


Q ss_pred             CeeEeEeEEEeCCEEEEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          477 HILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       477 nIVrL~d~F~~~~hLyIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      |||+++++|.+++|+|||+|+++.+|+++||.++.++    |+...++.|+.||+.||.+||.++|||-|||+
T Consensus       249 n~Vrm~d~F~fr~HlciVfELL~~NLYellK~n~f~G----lsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKP  317 (586)
T KOG0667|consen  249 NIVRMLDYFYFRNHLCIVFELLSTNLYELLKNNKFRG----LSLPLVRKFAQQILTALLFLHELGIIHCDLKP  317 (586)
T ss_pred             eEEEeeeccccccceeeeehhhhhhHHHHHHhcCCCC----CCHHHHHHHHHHHHHHHHHHHhCCeeeccCCh
Confidence            9999999999999999999999999999999999877    99999999999999999999999999999996

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.91  E-value=8.5e-24  Score=225.39  Aligned_cols=151  Identities=29%  Similarity=0.411  Sum_probs=141.2

Q ss_pred             CCccCCCCCcceeeCceec-CceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChhhHHHHHHHHHHHHHhcccC--
Q 008813          395 RTGFEENKDLPIILNTVIA-GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKND--  471 (552)
Q Consensus       395 ~~gfde~~~y~v~~gdvi~-~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd--  471 (552)
                      ...|-..++++|.+|+++. +||.+.++||.|-|++||+|+|.++.+.|||||++....+.+.++.||++|++++.+|  
T Consensus        58 ~~dY~kGGYHpV~IGD~F~~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAqhYtEaAlDEIklL~~v~~~Dp~  137 (590)
T KOG1290|consen   58 PEDYRKGGYHPVRIGDVFNGGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQHYTEAALDEIKLLQQVREGDPN  137 (590)
T ss_pred             hhhhhcCCCceeeccccccCceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhhHHHHHHHHHHHHHHHHHhcCCC
Confidence            3445678899999999999 9999999999999999999999999999999999998889999999999999999988  


Q ss_pred             CCCCCCeeEeEeEEEeC----CEEEEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHH-hCCCeeee
Q 008813          472 PADEHHILRLYDYFYHL----EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIF-LLLVIYFI  546 (552)
Q Consensus       472 ~~d~pnIVrL~d~F~~~----~hLyIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLH-s~gIIH~~  546 (552)
                      ..+..+||+|+|.|...    .|+|||+|+++.+|..+|++...+|    ++...++.|++|||.||.||| ..||||.|
T Consensus       138 ~~~~~~VV~LlD~FkhsGpNG~HVCMVfEvLGdnLLklI~~s~YrG----lpl~~VK~I~~qvL~GLdYLH~ecgIIHTD  213 (590)
T KOG1290|consen  138 DPGKKCVVQLLDHFKHSGPNGQHVCMVFEVLGDNLLKLIKYSNYRG----LPLSCVKEICRQVLTGLDYLHRECGIIHTD  213 (590)
T ss_pred             CCCCceeeeeeccceecCCCCcEEEEEehhhhhHHHHHHHHhCCCC----CcHHHHHHHHHHHHHHHHHHHHhcCccccC
Confidence            67899999999999865    5899999999999999999998887    999999999999999999999 56999999


Q ss_pred             ccc
Q 008813          547 LFC  549 (552)
Q Consensus       547 L~~  549 (552)
                      ||+
T Consensus       214 lKP  216 (590)
T KOG1290|consen  214 LKP  216 (590)
T ss_pred             CCc
Confidence            996

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.89  E-value=4.5e-23  Score=216.29  Aligned_cols=125  Identities=22%  Similarity=0.348  Sum_probs=117.0

Q ss_pred             cCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC---hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCC
Q 008813          413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE  489 (552)
Q Consensus       413 ~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s---k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~  489 (552)
                      .++|.+.+.||.|+||+||+|+++.++..||||.|.+.   +..++.+..||+||+.|+|      +|||+|+++...++
T Consensus         9 ~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H------~nIV~l~d~~~~~~   82 (429)
T KOG0595|consen    9 VGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKH------PNIVRLLDCIEDDD   82 (429)
T ss_pred             cccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCC------cceeeEEEEEecCC
Confidence            46799999999999999999999999999999999754   4566788999999999998      99999999999999


Q ss_pred             EEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          490 HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       490 hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ++|||||||.| +|.++|+.++.      +++..++.++.||+.||++||+++|||+|||+
T Consensus        83 ~i~lVMEyC~gGDLs~yi~~~~~------l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKP  137 (429)
T KOG0595|consen   83 FIYLVMEYCNGGDLSDYIRRRGR------LPEATARHFMQQLASALQFLHENNIIHRDLKP  137 (429)
T ss_pred             eEEEEEEeCCCCCHHHHHHHcCC------CCHHHHHHHHHHHHHHHHHHHHCCeeeccCCc
Confidence            99999999996 99999998764      89999999999999999999999999999997

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.89  E-value=1.6e-22  Score=220.15  Aligned_cols=124  Identities=24%  Similarity=0.381  Sum_probs=116.3

Q ss_pred             CceEEEEEeccCCceEEEEEEECCCCcEEEEEEEec----ChhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCC
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKN----DKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE  489 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~----sk~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~  489 (552)
                      .||...+.||+|||++||.+++..+|+.||+|+|.+    +...++.+.+||+|++.|+|      ||||+++++|++.+
T Consensus        18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~H------pnIV~f~~~FEDs~   91 (592)
T KOG0575|consen   18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKH------PNIVQFYHFFEDSN   91 (592)
T ss_pred             ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCC------CcEEeeeeEeecCC
Confidence            689999999999999999999999999999999987    35567889999999999999      99999999999999


Q ss_pred             EEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          490 HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       490 hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ++|||+|+|.. +|.+++++++.      |+|.+++.|++||+.||.|||+++|||+|||-
T Consensus        92 nVYivLELC~~~sL~el~Krrk~------ltEpEary~l~QIv~GlkYLH~~~IiHRDLKL  146 (592)
T KOG0575|consen   92 NVYIVLELCHRGSLMELLKRRKP------LTEPEARYFLRQIVEGLKYLHSLGIIHRDLKL  146 (592)
T ss_pred             ceEEEEEecCCccHHHHHHhcCC------CCcHHHHHHHHHHHHHHHHHHhcCceecccch
Confidence            99999999987 99999996543      99999999999999999999999999999983

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=99.86  E-value=2.5e-21  Score=203.52  Aligned_cols=127  Identities=24%  Similarity=0.284  Sum_probs=115.0

Q ss_pred             eecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChh--------hHHHHHHHHHHHHHhcccCCCCCCCeeEeE
Q 008813          411 VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD--------FFDQSLDEIKLLKLVNKNDPADEHHILRLY  482 (552)
Q Consensus       411 vi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~--------~~~~~lrEIkILk~L~hhd~~d~pnIVrL~  482 (552)
                      .+.+.|.+.+.||+|+||.|.+|..+++|+.||||+|.+.+.        ....+.+|++||++|+|      ||||+++
T Consensus       169 s~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~H------P~IV~~~  242 (475)
T KOG0615|consen  169 SFNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSH------PNIVRIK  242 (475)
T ss_pred             hhcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCC------CCEEEEe
Confidence            356779999999999999999999999999999999986422        11236799999999999      9999999


Q ss_pred             eEEEeCCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          483 DYFYHLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       483 d~F~~~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ++|...+..||||||++| +|++++-.++.      +.+..-+.+++||+.||.|||++||+|+|||+
T Consensus       243 d~f~~~ds~YmVlE~v~GGeLfd~vv~nk~------l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKP  304 (475)
T KOG0615|consen  243 DFFEVPDSSYMVLEYVEGGELFDKVVANKY------LREDLGKLLFKQLLTAVKYLHSQGIIHRDIKP  304 (475)
T ss_pred             eeeecCCceEEEEEEecCccHHHHHHhccc------cccchhHHHHHHHHHHHHHHHHcCcccccCCc
Confidence            999999999999999987 99999988775      78889999999999999999999999999997

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.85  E-value=9.9e-22  Score=210.43  Aligned_cols=131  Identities=22%  Similarity=0.275  Sum_probs=118.7

Q ss_pred             eCceecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC---hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeE
Q 008813          408 LNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDY  484 (552)
Q Consensus       408 ~gdvi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s---k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~  484 (552)
                      +...-...|+.+++||+|+||+||+|++..+|+.||||.++..   ..+...+.|||.||++|+|      ||||+|.+.
T Consensus       111 w~~r~~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~H------pNIikL~ei  184 (560)
T KOG0600|consen  111 WGPRRADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDH------PNIIKLEEI  184 (560)
T ss_pred             ccccchHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCC------CcccceeeE
Confidence            3344557799999999999999999999999999999999864   4566788999999999999      999999999


Q ss_pred             EEeC--CEEEEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          485 FYHL--EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       485 F~~~--~hLyIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ....  ..+|||+|||+.+|.-++....-+     |++.+|+.|++||+.||.|||.+||+|+||||
T Consensus       185 vt~~~~~siYlVFeYMdhDL~GLl~~p~vk-----ft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~  246 (560)
T KOG0600|consen  185 VTSKLSGSIYLVFEYMDHDLSGLLSSPGVK-----FTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKG  246 (560)
T ss_pred             EEecCCceEEEEEecccchhhhhhcCCCcc-----cChHHHHHHHHHHHHHHHHHhhcCeeeccccc
Confidence            9877  789999999999999999876532     99999999999999999999999999999998

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=99.85  E-value=5.7e-21  Score=198.41  Aligned_cols=125  Identities=22%  Similarity=0.309  Sum_probs=116.3

Q ss_pred             cCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecCh----hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeC
Q 008813          413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL  488 (552)
Q Consensus       413 ~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk----~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~  488 (552)
                      .+.|+++++||+|+||+|++++.+.+++.+|+|++++.+    ...++...|..||..++|      |+||.|+..|++.
T Consensus        24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~h------PFiv~l~ysFQt~   97 (357)
T KOG0598|consen   24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKH------PFIVKLIYSFQTE   97 (357)
T ss_pred             hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCC------CcEeeeEEecccC
Confidence            467999999999999999999999999999999998752    245688999999999998      9999999999999


Q ss_pred             CEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          489 EHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       489 ~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      +++|||+||+.| .|+..|++.+.      |++..++.|+.+|+.||.|||++||||+|||+
T Consensus        98 ~kLylVld~~~GGeLf~hL~~eg~------F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKP  153 (357)
T KOG0598|consen   98 EKLYLVLDYLNGGELFYHLQREGR------FSEDRARFYLAEIVLALGYLHSKGIIYRDLKP  153 (357)
T ss_pred             CeEEEEEeccCCccHHHHHHhcCC------cchhHHHHHHHHHHHHHHHHHhCCeeeccCCH
Confidence            999999999987 99999998765      99999999999999999999999999999996

>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]

Probab=99.84  E-value=3.7e-21  Score=200.67  Aligned_cols=148  Identities=26%  Similarity=0.380  Sum_probs=140.4

Q ss_pred             cCCCCCcceeeCceecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChhhHHHHHHHHHHHHHhcccCCCCCCC
Q 008813          398 FEENKDLPIILNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHH  477 (552)
Q Consensus       398 fde~~~y~v~~gdvi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd~~d~pn  477 (552)
                      -+..++|+..+++.+..||.++..||+|.||+|.+|.|..++..||||||++-..+++.++.|+++|++|+++||.+.--
T Consensus        73 dD~dGH~v~~~gD~l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~kYreAa~iEi~vLqki~~~DP~g~~r  152 (415)
T KOG0671|consen   73 DDKDGHYVYQVGDILTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVDKYREAALIEIEVLQKINESDPNGKFR  152 (415)
T ss_pred             CCCCceEEEEeccccccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHHHHhhHHHHHHHHHHHHHhcCCCCceE
Confidence            45567799999999999999999999999999999999999999999999988889999999999999999999999999


Q ss_pred             eeEeEeEEEeCCEEEEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          478 ILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       478 IVrL~d~F~~~~hLyIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      +|++.++|...+|+|||+|+++-+++++|+.+...    +++...++.|+.|+++++.|||+++|+|.|||+
T Consensus       153 cv~m~~wFdyrghiCivfellG~S~~dFlk~N~y~----~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKP  220 (415)
T KOG0671|consen  153 CVQMRDWFDYRGHICIVFELLGLSTFDFLKENNYI----PFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKP  220 (415)
T ss_pred             EEeeehhhhccCceEEEEeccChhHHHHhccCCcc----ccchHHHHHHHHHHHHHHHHHHhcceeecCCCh
Confidence            99999999999999999999999999999987764    499999999999999999999999999999996

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=99.84  E-value=1.5e-20  Score=202.61  Aligned_cols=126  Identities=20%  Similarity=0.217  Sum_probs=117.0

Q ss_pred             ecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC----hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEe
Q 008813          412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND----KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH  487 (552)
Q Consensus       412 i~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s----k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~  487 (552)
                      -.+.|+++..||+|+||.||+|+.+.||..+|||+++++    +..+.+++.|-.||.....      ++||+||..|++
T Consensus       139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds------~~vVKLyYsFQD  212 (550)
T KOG0605|consen  139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDS------PWVVKLYYSFQD  212 (550)
T ss_pred             CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCC------CcEEEEEEEecC
Confidence            346799999999999999999999999999999999986    3456789999999999776      999999999999


Q ss_pred             CCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          488 LEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       488 ~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      .+++||||||++| ++..+|.+...      |++..++.|+.+++.|+.-||++|+||+|||+
T Consensus       213 ~~~LYLiMEylPGGD~mTLL~~~~~------L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKP  269 (550)
T KOG0605|consen  213 KEYLYLIMEYLPGGDMMTLLMRKDT------LTEDWARFYIAETVLAIESIHQLGYIHRDIKP  269 (550)
T ss_pred             CCeeEEEEEecCCccHHHHHHhcCc------CchHHHHHHHHHHHHHHHHHHHcCcccccCCh
Confidence            9999999999987 99999998765      99999999999999999999999999999997

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=99.84  E-value=9.2e-22  Score=207.96  Aligned_cols=216  Identities=21%  Similarity=0.277  Sum_probs=159.1

Q ss_pred             ccccCCcCCccccccCccccCCCCCCCCCccc-CCcccccccCCCCccccCCCCchhhhcccchhhhhhhhccccccccC
Q 008813          316 DWIEGFKGSSDLHFKGAEKDLMPAEIDNSDTR-DGEVNGALHEGKADAEEHGVATPDLLMFDNLEEECEIFHLRIIHRKN  394 (552)
Q Consensus       316 ~~~~~~~~~~~~~~k~~~k~~~p~~~~~~~~~-~~~~n~~~~~~~~~~~~e~~s~~ell~~~~~eee~EIf~lriI~~k~  394 (552)
                      +++.+.+.+....++...|-..|+.....+.+ ....|+....+..      +..++.+.+.++.+..|||.+|+-+.+.
T Consensus       348 eIerqrklLaKRKPp~~gkvqap~~~ne~kqrkskntNGaenifrr------peep~~ltlaEYhEqeEIfKLRlgHLkK  421 (775)
T KOG1151|consen  348 EIERQRKLLAKRKPPAMGKVQAPPATNEQKQRKSKNTNGAENIFRR------PEEPETLTLAEYHEQEEIFKLRLGHLKK  421 (775)
T ss_pred             HHHHHHHHHhccCCCCCCcCCCCCCccccccccccCCCcccccccC------CCCcccccHHHHHhHHHHHHHHHhhhhh
Confidence            34444444555555555443334433333333 3334443332221      3344566777888888888888765432


Q ss_pred             C----------------------CccCCCCCcceeeCceecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecCh-
Q 008813          395 R----------------------TGFEENKDLPIILNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK-  451 (552)
Q Consensus       395 ~----------------------~gfde~~~y~v~~gdvi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk-  451 (552)
                      .                      ....+...-.+.....+.+||.++.+||+|+|+.||+|.|....++||+||-..++ 
T Consensus       422 EEaeiqaElERLErvrnlHiRELKRi~NEdnSQFkDHptLn~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~  501 (775)
T KOG1151|consen  422 EEAEIQAELERLERVRNLHIRELKRIHNEDNSQFKDHPTLNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKN  501 (775)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhhcccchhhhccCcchHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccc
Confidence            2                      11112223334445578899999999999999999999999999999999986542 


Q ss_pred             -------hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeC-CEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHH
Q 008813          452 -------DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL-EHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGR  522 (552)
Q Consensus       452 -------~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~-~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~  522 (552)
                             .+.+++.+|.+|++.|.|      |.||++|++|.-. ..+|.|+|||.| +|.-+|+.++.      +++++
T Consensus       502 WrdEKKeNYhKHAcREyrIHKeLDH------pRIVKlYDyfslDtdsFCTVLEYceGNDLDFYLKQhkl------mSEKE  569 (775)
T KOG1151|consen  502 WRDEKKENYHKHACREYRIHKELDH------PRIVKLYDYFSLDTDSFCTVLEYCEGNDLDFYLKQHKL------MSEKE  569 (775)
T ss_pred             hhhHhhhhHHHHHHHHHhhhhccCc------ceeeeeeeeeeeccccceeeeeecCCCchhHHHHhhhh------hhHHH
Confidence                   356789999999999999      9999999999855 569999999999 89999998875      89999


Q ss_pred             HHHHHHHHHHHHHHHHhCC--Ceeeeccc
Q 008813          523 LQVCSTFLLTLLMLIFLLL--VIYFILFC  549 (552)
Q Consensus       523 I~~Ia~QIL~AL~YLHs~g--IIH~~L~~  549 (552)
                      ++.|+.||+.||.||....  |||+|||+
T Consensus       570 ARSIiMQiVnAL~YLNEikpPIIHYDLKP  598 (775)
T KOG1151|consen  570 ARSIIMQIVNALKYLNEIKPPIIHYDLKP  598 (775)
T ss_pred             HHHHHHHHHHHHHHHhccCCCeeeeccCC
Confidence            9999999999999999775  99999997

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.83  E-value=6.4e-22  Score=210.75  Aligned_cols=129  Identities=25%  Similarity=0.316  Sum_probs=115.3

Q ss_pred             eecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChhhHH--HHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeC
Q 008813          411 VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFD--QSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL  488 (552)
Q Consensus       411 vi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~~~~--~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~  488 (552)
                      .+..||.++++||.|+||.||+|+.+.++..||||.+++.-...+  .-+||++.|++|+.|     ||||+|.+.+.+.
T Consensus         7 ~~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~h-----pniikL~Evi~d~   81 (538)
T KOG0661|consen    7 IFMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPH-----PNIIKLKEVIRDN   81 (538)
T ss_pred             hHHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCC-----CcchhhHHHhhcc
Confidence            356899999999999999999999999999999999986522112  246999999999943     9999999999988


Q ss_pred             C-EEEEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          489 E-HLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       489 ~-hLyIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      + ++|+|||||+.+|+++++.++.     +|++..|+.|+.||++||.|||.+|+.|+|||+
T Consensus        82 ~~~L~fVfE~Md~NLYqLmK~R~r-----~fse~~irnim~QilqGL~hiHk~GfFHRDlKP  138 (538)
T KOG0661|consen   82 DRILYFVFEFMDCNLYQLMKDRNR-----LFSESDIRNIMYQILQGLAHIHKHGFFHRDLKP  138 (538)
T ss_pred             CceEeeeHHhhhhhHHHHHhhcCC-----cCCHHHHHHHHHHHHHHHHHHHhcCcccccCCh
Confidence            7 9999999999999999998742     499999999999999999999999999999996

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.83  E-value=3.9e-20  Score=195.50  Aligned_cols=128  Identities=23%  Similarity=0.299  Sum_probs=115.9

Q ss_pred             eecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC----h--hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeE
Q 008813          411 VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND----K--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDY  484 (552)
Q Consensus       411 vi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s----k--~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~  484 (552)
                      ...++|.+.+.||+|+||+|++|++..+++.||||++.+.    .  ...+.+.+|+.+++.+.+|     |||++++++
T Consensus        14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~H-----pnI~~l~ev   88 (370)
T KOG0583|consen   14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSH-----PNIIRLLEV   88 (370)
T ss_pred             cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccC-----CCEeEEEEE
Confidence            4567999999999999999999999999999999988764    1  2346777999999999954     999999999


Q ss_pred             EEeCCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          485 FYHLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       485 F~~~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      +....++||||||+.| +|++++...+.      +.|..++.+++||+.|++|||++||+|+|||+
T Consensus        89 ~~t~~~~~ivmEy~~gGdL~~~i~~~g~------l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~  148 (370)
T KOG0583|consen   89 FATPTKIYIVMEYCSGGDLFDYIVNKGR------LKEDEARKYFRQLISAVAYCHSRGIVHRDLKP  148 (370)
T ss_pred             EecCCeEEEEEEecCCccHHHHHHHcCC------CChHHHHHHHHHHHHHHHHHHhCCEeeCCCCH
Confidence            9999999999999987 99999998443      89999999999999999999999999999997

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=99.83  E-value=9.7e-21  Score=190.50  Aligned_cols=125  Identities=26%  Similarity=0.301  Sum_probs=116.4

Q ss_pred             CceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChh---hHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCE
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD---FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH  490 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~---~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~h  490 (552)
                      .||...++||+|.||.||+|+|..+++.||||.|+....   ....++|||+.|+.++|      +|||.|+|+|.+.+.
T Consensus         2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h------~nIi~LiD~F~~~~~   75 (318)
T KOG0659|consen    2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKH------PNIIELIDVFPHKSN   75 (318)
T ss_pred             chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccC------cchhhhhhhccCCCc
Confidence            589999999999999999999999999999999987522   34678999999999998      999999999999999


Q ss_pred             EEEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          491 LFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       491 LyIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      +-||+|||..+|..+|+.+..     +|+...++.|+.|+++||+|||++.|+|+|||+
T Consensus        76 l~lVfEfm~tdLe~vIkd~~i-----~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKP  129 (318)
T KOG0659|consen   76 LSLVFEFMPTDLEVVIKDKNI-----ILSPADIKSYMLMTLKGLAYCHSKWILHRDLKP  129 (318)
T ss_pred             eEEEEEeccccHHHHhccccc-----ccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCc
Confidence            999999999999999998764     399999999999999999999999999999997

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=99.82  E-value=5.3e-21  Score=200.70  Aligned_cols=126  Identities=23%  Similarity=0.336  Sum_probs=116.7

Q ss_pred             ecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecCh----hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEe
Q 008813          412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH  487 (552)
Q Consensus       412 i~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk----~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~  487 (552)
                      +..||++.+.||+|.||+|-+|.+...|+.||||.|++.+    .-.-++.+||+||..|+|      ||||.+|.+|..
T Consensus        51 lkHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNH------PhII~IyEVFEN  124 (668)
T KOG0611|consen   51 LKHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNH------PHIIQIYEVFEN  124 (668)
T ss_pred             hhhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCC------CceeehhhhhcC
Confidence            5579999999999999999999999999999999998752    334578899999999999      999999999999


Q ss_pred             CCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          488 LEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       488 ~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      .+.+.|||||..+ .|++++..++.      |++.+++.|++||+.|+.|+|.++++|+|||-
T Consensus       125 kdKIvivMEYaS~GeLYDYiSer~~------LsErEaRhfFRQIvSAVhYCHknrVvHRDLKL  181 (668)
T KOG0611|consen  125 KDKIVIVMEYASGGELYDYISERGS------LSEREARHFFRQIVSAVHYCHKNRVVHRDLKL  181 (668)
T ss_pred             CceEEEEEEecCCccHHHHHHHhcc------ccHHHHHHHHHHHHHHHHHHhhccceecccch
Confidence            9999999999876 99999998876      99999999999999999999999999999983

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.82  E-value=1.1e-19  Score=186.67  Aligned_cols=123  Identities=18%  Similarity=0.194  Sum_probs=111.9

Q ss_pred             ceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC----hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCE
Q 008813          415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND----KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH  490 (552)
Q Consensus       415 RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s----k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~h  490 (552)
                      +|++++.||+|+||.||+|++..+++.||||+++..    ......+.+|+.+|+.++|      +||++++++|...++
T Consensus         2 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h------~~iv~~~~~~~~~~~   75 (364)
T cd05599           2 DFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADN------PWVVKLYYSFQDENY   75 (364)
T ss_pred             CceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCC------CCCcceEEEEEcCCe
Confidence            699999999999999999999999999999999853    2234567789999999998      999999999999999


Q ss_pred             EEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          491 LFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       491 LyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      +||||||+.+ +|.+++.....      +++..++.|+.||+.||.|||++||||+|||+
T Consensus        76 ~~lv~E~~~~g~L~~~l~~~~~------l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp  129 (364)
T cd05599          76 LYLIMEYLPGGDMMTLLMKKDT------FTEEETRFYIAETILAIDSIHKLGYIHRDIKP  129 (364)
T ss_pred             EEEEECCCCCcHHHHHHHHcCC------CCHHHHHHHHHHHHHHHHHHHHCCeEeccCCH
Confidence            9999999976 99999886543      89999999999999999999999999999996

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.82  E-value=1.3e-19  Score=187.95  Aligned_cols=124  Identities=17%  Similarity=0.182  Sum_probs=112.0

Q ss_pred             CceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecCh----hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCC
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE  489 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk----~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~  489 (552)
                      ++|.+++.||+|+||.||+|++..+++.||||++.+..    ...+.+.+|+++++.++|      ||||+++++|....
T Consensus         1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~h------p~iv~~~~~~~~~~   74 (377)
T cd05629           1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDS------PWVVSLYYSFQDAQ   74 (377)
T ss_pred             CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCC------CCcceEEEEEEcCC
Confidence            36999999999999999999999999999999997532    234567889999999998      99999999999999


Q ss_pred             EEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          490 HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       490 hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ++||||||+.+ +|.+++.....      +++..++.|+.||+.||.|||++||||+|||+
T Consensus        75 ~~~lv~E~~~gg~L~~~l~~~~~------~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp  129 (377)
T cd05629          75 YLYLIMEFLPGGDLMTMLIKYDT------FSEDVTRFYMAECVLAIEAVHKLGFIHRDIKP  129 (377)
T ss_pred             eeEEEEeCCCCCcHHHHHHhcCC------CCHHHHHHHHHHHHHHHHHHHhCCeeccCCCH
Confidence            99999999976 99999886543      89999999999999999999999999999996

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.82  E-value=1.9e-19  Score=186.28  Aligned_cols=123  Identities=13%  Similarity=0.157  Sum_probs=111.6

Q ss_pred             ceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecCh----hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCE
Q 008813          415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH  490 (552)
Q Consensus       415 RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk----~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~h  490 (552)
                      .|++++.||+|+||.||+|++..+++.||||++....    .....+.+|+.+|+.++|      +||+++++.|...++
T Consensus         2 ~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h------~~iv~~~~~~~~~~~   75 (376)
T cd05598           2 MFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADN------EWVVKLYYSFQDKDN   75 (376)
T ss_pred             CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCC------CCcceEEEEEEcCCE
Confidence            6999999999999999999999999999999997532    234567899999999998      999999999999999


Q ss_pred             EEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          491 LFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       491 LyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      +||||||+.+ +|.+++.....      +++..++.|+.||+.||.|||++||||+|||+
T Consensus        76 ~~lv~E~~~~g~L~~~i~~~~~------~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp  129 (376)
T cd05598          76 LYFVMDYIPGGDMMSLLIRLGI------FEEDLARFYIAELTCAIESVHKMGFIHRDIKP  129 (376)
T ss_pred             EEEEEeCCCCCcHHHHHHhcCC------CCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCH
Confidence            9999999976 99999986543      89999999999999999999999999999996

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.81  E-value=2.3e-19  Score=186.42  Aligned_cols=123  Identities=15%  Similarity=0.182  Sum_probs=112.1

Q ss_pred             ceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC----hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCE
Q 008813          415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND----KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH  490 (552)
Q Consensus       415 RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s----k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~h  490 (552)
                      +|+++++||+|+||.||+|++..+++.||||++...    ......+.+|+++++.++|      +|||++++.|...++
T Consensus         2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h------~~iv~~~~~~~~~~~   75 (382)
T cd05625           2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADN------EWVVRLYYSFQDKDN   75 (382)
T ss_pred             CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCC------CcCCeEEEEEEeCCE
Confidence            699999999999999999999999999999999764    2234578899999999998      999999999999999


Q ss_pred             EEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          491 LFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       491 LyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      +|||||||.+ +|.+++...+.      +++..++.++.||+.||.|||++||||+|||+
T Consensus        76 ~~lv~E~~~gg~L~~~l~~~~~------~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp  129 (382)
T cd05625          76 LYFVMDYIPGGDMMSLLIRMGI------FPEDLARFYIAELTCAVESVHKMGFIHRDIKP  129 (382)
T ss_pred             EEEEEeCCCCCcHHHHHHhcCC------CCHHHHHHHHHHHHHHHHHHHhCCeecCCCCH
Confidence            9999999987 99999876542      89999999999999999999999999999996

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.81  E-value=2.5e-19  Score=186.55  Aligned_cols=123  Identities=15%  Similarity=0.166  Sum_probs=112.1

Q ss_pred             ceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC----hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCE
Q 008813          415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND----KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH  490 (552)
Q Consensus       415 RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s----k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~h  490 (552)
                      .|++++.||+|+||+||+|++..+++.||||+++..    ......+.+|+.+|+.++|      +||+++++++...++
T Consensus         2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h------~~iv~l~~~~~~~~~   75 (381)
T cd05626           2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADN------EWVVKLYYSFQDKDN   75 (381)
T ss_pred             CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCC------CCeeeeEEEEecCCE
Confidence            589999999999999999999999999999999763    2334568899999999998      999999999999999


Q ss_pred             EEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          491 LFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       491 LyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      +||||||+.+ +|.+++.....      +++..++.++.||+.||.|||++||||+|||+
T Consensus        76 ~~lv~E~~~gg~L~~~l~~~~~------~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp  129 (381)
T cd05626          76 LYFVMDYIPGGDMMSLLIRMEV------FPEVLARFYIAELTLAIESVHKMGFIHRDIKP  129 (381)
T ss_pred             EEEEEecCCCCcHHHHHHhcCC------CCHHHHHHHHHHHHHHHHHHHhCCeeecCCcH
Confidence            9999999977 99999886543      89999999999999999999999999999996

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.81  E-value=2.4e-19  Score=185.26  Aligned_cols=124  Identities=17%  Similarity=0.184  Sum_probs=112.3

Q ss_pred             CceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC----hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCC
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND----KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE  489 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s----k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~  489 (552)
                      ++|++++.||+|+||.||+|.+..+++.||||+++..    ......+.+|+.+++.++|      +||+++++.+....
T Consensus         1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~------~~iv~~~~~~~~~~   74 (363)
T cd05628           1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADS------LWVVKMFYSFQDKL   74 (363)
T ss_pred             CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCC------CCcceEEEEEecCC
Confidence            3689999999999999999999999999999999763    2234567889999999998      99999999999999


Q ss_pred             EEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          490 HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       490 hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ++||||||+.+ +|.+++.....      +++..++.++.||+.||.|||++||||+|||+
T Consensus        75 ~~~lv~E~~~gg~L~~~l~~~~~------l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp  129 (363)
T cd05628          75 NLYLIMEFLPGGDMMTLLMKKDT------LTEEETQFYIAETVLAIDSIHQLGFIHRDIKP  129 (363)
T ss_pred             eEEEEEcCCCCCcHHHHHHhcCC------CCHHHHHHHHHHHHHHHHHHHhCCeEecCCCH
Confidence            99999999987 99999986543      89999999999999999999999999999996

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.81  E-value=3.6e-19  Score=178.15  Aligned_cols=125  Identities=22%  Similarity=0.223  Sum_probs=112.4

Q ss_pred             CceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecCh--hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEE
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL  491 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk--~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hL  491 (552)
                      ++|++.+.||+|+||.||+|++..+++.||||+++...  .....+.+|+.+++.++|      +||+++++++....++
T Consensus         5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h------~niv~~~~~~~~~~~~   78 (303)
T cd07869           5 DSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKH------ANIVLLHDIIHTKETL   78 (303)
T ss_pred             ccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCC------CCcCeEEEEEecCCeE
Confidence            67999999999999999999999999999999997542  223457789999999998      9999999999999999


Q ss_pred             EEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          492 FIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       492 yIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      |+||||+.++|.+++.....     .+++..++.++.||+.||.|||+++|||+|||+
T Consensus        79 ~lv~e~~~~~l~~~~~~~~~-----~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp  131 (303)
T cd07869          79 TLVFEYVHTDLCQYMDKHPG-----GLHPENVKLFLFQLLRGLSYIHQRYILHRDLKP  131 (303)
T ss_pred             EEEEECCCcCHHHHHHhCCC-----CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCH
Confidence            99999999999998876542     289999999999999999999999999999996

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=99.81  E-value=3.9e-19  Score=177.03  Aligned_cols=125  Identities=21%  Similarity=0.213  Sum_probs=112.5

Q ss_pred             CceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecCh--hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEE
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL  491 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk--~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hL  491 (552)
                      ++|++++.||.|+||.||+|++..+++.||+|+++...  .....+.+|+.+++.++|      +||+++++++...+.+
T Consensus         5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h------~niv~~~~~~~~~~~~   78 (288)
T cd07871           5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKH------ANIVTLHDIIHTERCL   78 (288)
T ss_pred             ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCC------CCEeeEEEEEcCCCeE
Confidence            57999999999999999999999999999999997532  223567899999999998      9999999999999999


Q ss_pred             EEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          492 FIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       492 yIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ++||||+.++|.+++.....     .+++..++.++.||+.||.|||++||||+|||+
T Consensus        79 ~lv~e~~~~~l~~~l~~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp  131 (288)
T cd07871          79 TLVFEYLDSDLKQYLDNCGN-----LMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKP  131 (288)
T ss_pred             EEEEeCCCcCHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCH
Confidence            99999999999999876543     278999999999999999999999999999996

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=99.81  E-value=1.5e-19  Score=188.08  Aligned_cols=124  Identities=21%  Similarity=0.175  Sum_probs=114.1

Q ss_pred             CceEEEEEeccCCceEEEEEEECCCCcEEEEEEEec--ChhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCC-E
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKN--DKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE-H  490 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~--sk~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~-h  490 (552)
                      ...+.+..||+|+.|+|++|+++.|++.+|+|+|..  +...++++.+|++|++..++      |+||.+|++|...+ .
T Consensus        79 ~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~s------pyIV~~ygaF~~~~~~  152 (364)
T KOG0581|consen   79 SDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQS------PYIVGFYGAFYSNGEE  152 (364)
T ss_pred             HHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCC------CCeeeEeEEEEeCCce
Confidence            457778899999999999999999999999999954  46677899999999999988      99999999999999 5


Q ss_pred             EEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHh-CCCeeeeccc
Q 008813          491 LFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFL-LLVIYFILFC  549 (552)
Q Consensus       491 LyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs-~gIIH~~L~~  549 (552)
                      ++|+||||++ +|..+++..+.      ++|..+..|+.||++||.|||. ++|||||+|+
T Consensus       153 isI~mEYMDgGSLd~~~k~~g~------i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKP  207 (364)
T KOG0581|consen  153 ISICMEYMDGGSLDDILKRVGR------IPEPVLGKIARAVLRGLSYLHEERKIIHRDIKP  207 (364)
T ss_pred             EEeehhhcCCCCHHHHHhhcCC------CCHHHHHHHHHHHHHHHHHHhhccCeeeccCCH
Confidence            9999999998 99999997654      8999999999999999999995 9999999996

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=99.81  E-value=3.4e-20  Score=189.42  Aligned_cols=125  Identities=17%  Similarity=0.174  Sum_probs=115.0

Q ss_pred             CceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC---hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCE
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH  490 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s---k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~h  490 (552)
                      ++|+.+.++|+|+||+|++|+++.||+.||||.+..+   +...+-++|||++|++|+|      +|+|.|+.+|.....
T Consensus         2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH------~NLVnLiEVFrrkrk   75 (396)
T KOG0593|consen    2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKH------ENLVNLIEVFRRKRK   75 (396)
T ss_pred             cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhccc------chHHHHHHHHHhcce
Confidence            5799999999999999999999999999999998754   3355778999999999999      999999999999999


Q ss_pred             EEEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          491 LFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       491 LyIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ++||+|||+.++.+.|..... |    ++...++.|+.|++.|+.|+|+++|||+|+|+
T Consensus        76 lhLVFE~~dhTvL~eLe~~p~-G----~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKP  129 (396)
T KOG0593|consen   76 LHLVFEYCDHTVLHELERYPN-G----VPSELVKKYLYQLLKAIHFCHKNNCIHRDIKP  129 (396)
T ss_pred             eEEEeeecchHHHHHHHhccC-C----CCHHHHHHHHHHHHHHhhhhhhcCeecccCCh
Confidence            999999999988888887664 3    89999999999999999999999999999986

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=99.80  E-value=1.7e-19  Score=183.75  Aligned_cols=124  Identities=20%  Similarity=0.367  Sum_probs=116.1

Q ss_pred             CceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecCh----hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCC
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE  489 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk----~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~  489 (552)
                      ..|++++.||.|+||+|.+++.+.+|..+|+|++.+.+    ...++..+|..+|+.+.|      |++++|++.|.+..
T Consensus        44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~------PFlv~l~~t~~d~~  117 (355)
T KOG0616|consen   44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSH------PFLVKLYGTFKDNS  117 (355)
T ss_pred             hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccC------ceeEEEEEeeccCC
Confidence            56999999999999999999999999999999998752    345788999999999998      99999999999999


Q ss_pred             EEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          490 HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       490 hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ++||||||.+| .|+.++++.++      |++..++.|+.||+.||+|||+++||++|||+
T Consensus       118 ~lymvmeyv~GGElFS~Lrk~~r------F~e~~arFYAAeivlAleylH~~~iiYRDLKP  172 (355)
T KOG0616|consen  118 NLYMVMEYVPGGELFSYLRKSGR------FSEPHARFYAAEIVLALEYLHSLDIIYRDLKP  172 (355)
T ss_pred             eEEEEEeccCCccHHHHHHhcCC------CCchhHHHHHHHHHHHHHHHHhcCeeeccCCh
Confidence            99999999987 99999998775      99999999999999999999999999999996

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.80  E-value=6.4e-19  Score=179.26  Aligned_cols=124  Identities=17%  Similarity=0.178  Sum_probs=112.3

Q ss_pred             CceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecCh----hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCC
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE  489 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk----~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~  489 (552)
                      ++|++++.||+|+||.||+|++..+++.||||+++...    .....+.+|+.+++.++|      +||+++++++...+
T Consensus         1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h------~~iv~~~~~~~~~~   74 (333)
T cd05600           1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKS------EWLVKLLYAFQDDE   74 (333)
T ss_pred             CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCC------CCCccEEEEEEcCC
Confidence            46999999999999999999999999999999998642    234567899999999998      99999999999999


Q ss_pred             EEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          490 HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       490 hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ++||||||+.+ +|.+++.....      +++..++.++.||+.||.|||++||||+|||+
T Consensus        75 ~~~lv~e~~~g~~L~~~l~~~~~------l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp  129 (333)
T cd05600          75 YLYLAMEYVPGGDFRTLLNNLGV------LSEDHARFYMAEMFEAVDALHELGYIHRDLKP  129 (333)
T ss_pred             EEEEEEeCCCCCCHHHHHHHcCC------CCHHHHHHHHHHHHHHHHHHHHCCccccCCCH
Confidence            99999999977 99999976543      89999999999999999999999999999986

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.80  E-value=3.9e-19  Score=177.60  Aligned_cols=124  Identities=16%  Similarity=0.201  Sum_probs=112.0

Q ss_pred             CceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecCh----hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCC
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE  489 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk----~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~  489 (552)
                      .+|++++.||+|+||.||+|.+..+++.||||++....    ...+.+.+|+.+|+.++|      |||+++++++...+
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~h------p~iv~~~~~~~~~~   74 (291)
T cd05612           1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSH------PFIIRLFWTEHDQR   74 (291)
T ss_pred             CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCC------CcHhhhHhhhccCC
Confidence            36999999999999999999999999999999997532    234567899999999998      99999999999999


Q ss_pred             EEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          490 HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       490 hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ++||||||+.+ +|.++++..+.      +++..++.++.||+.||.|||++||+|++|++
T Consensus        75 ~~~lv~e~~~~~~L~~~~~~~~~------~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp  129 (291)
T cd05612          75 FLYMLMEYVPGGELFSYLRNSGR------FSNSTGLFYASEIVCALEYLHSKEIVYRDLKP  129 (291)
T ss_pred             eEEEEEeCCCCCCHHHHHHHcCC------CCHHHHHHHHHHHHHHHHHHHHCCeeecCCCH
Confidence            99999999986 99999987543      89999999999999999999999999999986

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.80  E-value=8.1e-19  Score=179.09  Aligned_cols=124  Identities=17%  Similarity=0.216  Sum_probs=112.7

Q ss_pred             CceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecCh----hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCC
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE  489 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk----~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~  489 (552)
                      ..|++.+.||+|+||.||+|++..+++.||||+++...    ...+.+.+|+.+|+.++|      |||+++++++...+
T Consensus        18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~h------p~iv~~~~~~~~~~   91 (329)
T PTZ00263         18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSH------PFIVNMMCSFQDEN   91 (329)
T ss_pred             hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCC------CCCCcEEEEEEcCC
Confidence            57999999999999999999999999999999997542    234568899999999998      99999999999999


Q ss_pred             EEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          490 HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       490 hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ++|+||||+.+ +|.+++.....      +++..++.++.||+.||.|||++||+|+|||+
T Consensus        92 ~~~lv~e~~~~~~L~~~l~~~~~------~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp  146 (329)
T PTZ00263         92 RVYFLLEFVVGGELFTHLRKAGR------FPNDVAKFYHAELVLAFEYLHSKDIIYRDLKP  146 (329)
T ss_pred             EEEEEEcCCCCChHHHHHHHcCC------CCHHHHHHHHHHHHHHHHHHHHCCeeecCCCH
Confidence            99999999876 99999987543      89999999999999999999999999999996

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.79  E-value=6.4e-19  Score=179.20  Aligned_cols=124  Identities=21%  Similarity=0.274  Sum_probs=112.5

Q ss_pred             CceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecCh----hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCC
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE  489 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk----~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~  489 (552)
                      ++|.+++.||+|+||.||+|++..+++.||||+++...    .....+.+|+.++..++|      +||+++++++...+
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~------~~i~~~~~~~~~~~   74 (350)
T cd05573           1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADS------PWIVKLYYSFQDEE   74 (350)
T ss_pred             CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCC------CCccchhhheecCC
Confidence            47999999999999999999999999999999998532    334567889999999998      99999999999999


Q ss_pred             EEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          490 HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       490 hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ++||||||+.+ +|.+++.....      +++..++.|+.||+.||.|||++||||+|||+
T Consensus        75 ~~~lv~e~~~~~~L~~~l~~~~~------l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp  129 (350)
T cd05573          75 HLYLVMEYMPGGDLMNLLIRKDV------FPEETARFYIAELVLALDSVHKLGFIHRDIKP  129 (350)
T ss_pred             eEEEEEcCCCCCCHHHHHHHcCC------CCHHHHHHHHHHHHHHHHHHHHCCeeccCCCH
Confidence            99999999976 99999987632      89999999999999999999999999999986

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.79  E-value=1.2e-18  Score=179.65  Aligned_cols=123  Identities=16%  Similarity=0.190  Sum_probs=111.6

Q ss_pred             ceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC----hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCE
Q 008813          415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND----KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH  490 (552)
Q Consensus       415 RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s----k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~h  490 (552)
                      .|++++.||+|+||.||+|++..+++.||||+++..    ......+.+|+.++..++|      ++|+++++.|...++
T Consensus         2 ~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~------~~iv~~~~~~~~~~~   75 (360)
T cd05627           2 DFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADG------AWVVKMFYSFQDKRN   75 (360)
T ss_pred             CceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCC------CCEeeEEEEEEcCCE
Confidence            589999999999999999999999999999999753    2234567889999999998      999999999999999


Q ss_pred             EEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          491 LFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       491 LyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      +||||||+.+ +|.+++.....      +++..++.|+.||+.||.|||++||||+|||+
T Consensus        76 ~~lv~E~~~gg~L~~~l~~~~~------l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp  129 (360)
T cd05627          76 LYLIMEFLPGGDMMTLLMKKDT------LSEEATQFYIAETVLAIDAIHQLGFIHRDIKP  129 (360)
T ss_pred             EEEEEeCCCCccHHHHHHhcCC------CCHHHHHHHHHHHHHHHHHHHHCCeEccCCCH
Confidence            9999999987 99999886543      89999999999999999999999999999996

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=99.79  E-value=1.9e-19  Score=194.33  Aligned_cols=125  Identities=20%  Similarity=0.227  Sum_probs=113.7

Q ss_pred             CceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC----hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCC
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND----KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE  489 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s----k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~  489 (552)
                      ..|..++.||.|+|++|++|+++.+++.|||||+.+.    ....+-+.+|-.+|..|++|     |+||+||-.|++..
T Consensus        73 ~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~h-----PgivkLy~TFQD~~  147 (604)
T KOG0592|consen   73 NDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGH-----PGIVKLYFTFQDEE  147 (604)
T ss_pred             hhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCC-----CCeEEEEEEeeccc
Confidence            4588899999999999999999999999999999764    22234577899999999765     99999999999999


Q ss_pred             EEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          490 HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       490 hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      .+|+|+||+.+ +|.++|++.+.      |++..++.|+.||+.||+|||++||||+|||+
T Consensus       148 sLYFvLe~A~nGdll~~i~K~Gs------fde~caR~YAAeIldAleylH~~GIIHRDlKP  202 (604)
T KOG0592|consen  148 SLYFVLEYAPNGDLLDLIKKYGS------FDETCARFYAAEILDALEYLHSNGIIHRDLKP  202 (604)
T ss_pred             ceEEEEEecCCCcHHHHHHHhCc------chHHHHHHHHHHHHHHHHHHHhcCceeccCCh
Confidence            99999999986 99999998865      99999999999999999999999999999996

>PTZ00284 protein kinase; Provisional

Probab=99.79  E-value=9.4e-18  Score=179.99  Aligned_cols=131  Identities=22%  Similarity=0.276  Sum_probs=115.9

Q ss_pred             cCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeC-CEE
Q 008813          413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL-EHL  491 (552)
Q Consensus       413 ~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~-~hL  491 (552)
                      .++|+++++||+|+||+||+|.+..+++.||||+++...........|+.+++.+.+.+..++.+|++++++|... .++
T Consensus       128 ~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~~~~  207 (467)
T PTZ00284        128 TQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPKYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNETGHM  207 (467)
T ss_pred             CCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecchhhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcCCceE
Confidence            5899999999999999999999999999999999986555556678899999999886556677899999999865 689


Q ss_pred             EEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHh-CCCeeeeccc
Q 008813          492 FIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFL-LLVIYFILFC  549 (552)
Q Consensus       492 yIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs-~gIIH~~L~~  549 (552)
                      |||||+++++|.+++.....      +++..++.|+.||+.||.|||+ .||||+|||+
T Consensus       208 ~iv~~~~g~~l~~~l~~~~~------l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP  260 (467)
T PTZ00284        208 CIVMPKYGPCLLDWIMKHGP------FSHRHLAQIIFQTGVALDYFHTELHLMHTDLKP  260 (467)
T ss_pred             EEEEeccCCCHHHHHHHcCC------CCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCH
Confidence            99999999999999876543      8999999999999999999997 6999999996

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=99.79  E-value=1.3e-18  Score=177.74  Aligned_cols=125  Identities=14%  Similarity=0.103  Sum_probs=111.1

Q ss_pred             CceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC----hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCC
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND----KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE  489 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s----k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~  489 (552)
                      ++|++++.||+|+||.||++++..+++.||||++.+.    ....+.+.+|+.+++.++|      +||++++++|...+
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~------~~i~~~~~~~~~~~   74 (331)
T cd05597           1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDR------RWITNLHYAFQDEN   74 (331)
T ss_pred             CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCC------CCCCceEEEEecCC
Confidence            3699999999999999999999999999999999753    2233457789999999988      99999999999999


Q ss_pred             EEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          490 HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       490 hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ++||||||+.+ +|.+++......     +++..++.++.||+.||.|||+++|||+|||+
T Consensus        75 ~~~lv~e~~~g~~L~~~l~~~~~~-----~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp  130 (331)
T cd05597          75 NLYLVMDYYVGGDLLTLLSKFEDR-----LPEDMARFYLAEMVLAIDSVHQLGYVHRDIKP  130 (331)
T ss_pred             eEEEEEecCCCCcHHHHHHHhcCC-----CCHHHHHHHHHHHHHHHHHHHhCCeEECCCCH
Confidence            99999999876 999999764322     89999999999999999999999999999996

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=99.79  E-value=1.3e-18  Score=175.58  Aligned_cols=123  Identities=28%  Similarity=0.343  Sum_probs=109.1

Q ss_pred             ceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC---hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeC---
Q 008813          415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL---  488 (552)
Q Consensus       415 RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s---k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~---  488 (552)
                      ||++.+.||+|+||.||+|.+..+++.||||+++..   ......+.+|+++|+.++|      |||+++++++...   
T Consensus         1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h------pniv~~~~~~~~~~~~   74 (338)
T cd07859           1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRH------PDIVEIKHIMLPPSRR   74 (338)
T ss_pred             CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCC------CCEeeecceEeccCCC
Confidence            699999999999999999999999999999998743   1223467899999999998      9999999988643   


Q ss_pred             --CEEEEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          489 --EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       489 --~hLyIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                        ..+|||||||+++|.+++.....      +++..++.++.||+.||.|||++||||+|||+
T Consensus        75 ~~~~~~lv~e~~~~~L~~~l~~~~~------~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp  131 (338)
T cd07859          75 EFKDIYVVFELMESDLHQVIKANDD------LTPEHHQFFLYQLLRALKYIHTANVFHRDLKP  131 (338)
T ss_pred             CCceEEEEEecCCCCHHHHHHhccc------CCHHHHHHHHHHHHHHHHHHHHCCeecCCCCH
Confidence              35899999999999999886543      89999999999999999999999999999986

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=99.78  E-value=1.7e-18  Score=170.77  Aligned_cols=125  Identities=17%  Similarity=0.242  Sum_probs=110.6

Q ss_pred             CceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC---hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCE
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH  490 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s---k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~h  490 (552)
                      ++|++.+.||+|+||.||+|++..+++.||||+++..   ....+.+.+|+.+++.++|      +||+++++++...++
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h------~~iv~~~~~~~~~~~   74 (287)
T cd07848           1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQ------ENIVELKEAFRRRGK   74 (287)
T ss_pred             CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCC------ccccchhhhEecCCE
Confidence            3799999999999999999999999999999999754   2234677899999999998      999999999999999


Q ss_pred             EEEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          491 LFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       491 LyIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      +||||||+.+++.+.+.....     .+++..++.++.||+.||.|||+++|+|++||+
T Consensus        75 ~~lv~e~~~~~~l~~~~~~~~-----~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp  128 (287)
T cd07848          75 LYLVFEYVEKNMLELLEEMPN-----GVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKP  128 (287)
T ss_pred             EEEEEecCCCCHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCH
Confidence            999999999976666654332     289999999999999999999999999999986

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=99.78  E-value=4.6e-19  Score=183.26  Aligned_cols=128  Identities=23%  Similarity=0.249  Sum_probs=113.7

Q ss_pred             CceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChh---hHHHHHHHHHHHHHhcccCCCCCCC-eeEeEeEEEeCC
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD---FFDQSLDEIKLLKLVNKNDPADEHH-ILRLYDYFYHLE  489 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~---~~~~~lrEIkILk~L~hhd~~d~pn-IVrL~d~F~~~~  489 (552)
                      ..|..+++||+|+||+||+|+.+.+|+.||||.++...+   .-..+.+|+.+|+.|+|      +| ||+|++++.+.+
T Consensus        11 ~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~------~~~iv~L~dv~~~~~   84 (323)
T KOG0594|consen   11 FDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSH------ANHIVRLHDVIHTSN   84 (323)
T ss_pred             HHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCC------CcceEEEEeeeeecc
Confidence            457778899999999999999999999999999997633   34567999999999999      66 999999999877


Q ss_pred             ------EEEEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          490 ------HLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       490 ------hLyIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                            .+++|+||++.+|..++.......  ..++...++.+++||+.||+|||+++|||+|||+
T Consensus        85 ~~~~~~~l~lvfe~~d~DL~~ymd~~~~~~--~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKP  148 (323)
T KOG0594|consen   85 NHRGIGKLYLVFEFLDRDLKKYMDSLPKKP--QGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKP  148 (323)
T ss_pred             cccccceEEEEEEeecccHHHHHHhccccc--cCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCc
Confidence                  899999999999999999876421  1278899999999999999999999999999997

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.78  E-value=2.6e-18  Score=174.28  Aligned_cols=125  Identities=17%  Similarity=0.177  Sum_probs=112.1

Q ss_pred             CceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecCh----hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCC
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE  489 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk----~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~  489 (552)
                      ++|.+.+.||+|+||.||+|.+..+++.||||+++...    .....+.+|+.+++.++|      +||+++++++...+
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~------~~i~~~~~~~~~~~   74 (330)
T cd05601           1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNS------PWIPQLQYAFQDKD   74 (330)
T ss_pred             CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCC------CCCcceeeEEecCC
Confidence            36999999999999999999999999999999998642    234567889999999888      99999999999999


Q ss_pred             EEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          490 HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       490 hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ++||||||+.+ +|.++++....     ++++..++.++.||+.||.|||+++|+|+|||+
T Consensus        75 ~~~lv~e~~~~~~L~~~l~~~~~-----~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp  130 (330)
T cd05601          75 NLYLVMEYQPGGDLLSLLNRYED-----QFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKP  130 (330)
T ss_pred             eEEEEECCCCCCCHHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCCeEcccCch
Confidence            99999999976 99999987632     289999999999999999999999999999996

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.78  E-value=1.7e-18  Score=175.94  Aligned_cols=118  Identities=23%  Similarity=0.287  Sum_probs=106.3

Q ss_pred             EEeccCCceEEEEEEECCCCcEEEEEEEecC----hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEEEEEE
Q 008813          420 EYLGSAAFSKVFQAQDLHTGVDVCLKIIKND----KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVC  495 (552)
Q Consensus       420 e~LGkG~FG~VykA~Dkktg~~VAVKIIk~s----k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hLyIVm  495 (552)
                      +.||+|+||.||+|++..+++.||||+++..    ......+.+|+.+|+.++|      |||++++++|...+++||||
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h------p~i~~~~~~~~~~~~~~lv~   74 (323)
T cd05571           1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRH------PFLTALKYSFQTHDRLCFVM   74 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCC------CCCCCEEEEEEcCCEEEEEE
Confidence            3699999999999999999999999999863    2234567889999999998      99999999999999999999


Q ss_pred             ecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          496 ELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       496 Ell~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ||+.+ +|.+++.....      +++..++.|+.||+.||.|||++||||+|||+
T Consensus        75 e~~~~~~L~~~l~~~~~------~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp  123 (323)
T cd05571          75 EYANGGELFFHLSRERV------FSEDRARFYGAEIVSALGYLHSCDVVYRDLKL  123 (323)
T ss_pred             eCCCCCcHHHHHHHcCC------CCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCH
Confidence            99987 89999876543      89999999999999999999999999999996

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=99.78  E-value=3.7e-18  Score=174.41  Aligned_cols=125  Identities=14%  Similarity=0.078  Sum_probs=110.6

Q ss_pred             CceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecCh----hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCC
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE  489 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk----~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~  489 (552)
                      ++|++++.||+|+||.||++++..+++.||||++....    .....+..|+.++..++|      ++|+++++++...+
T Consensus         1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~------~~i~~l~~~~~~~~   74 (331)
T cd05624           1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDC------QWITTLHYAFQDEN   74 (331)
T ss_pred             CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCC------CCEeeEEEEEEcCC
Confidence            36999999999999999999999999999999997531    223456788999998888      99999999999999


Q ss_pred             EEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          490 HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       490 hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ++||||||+.+ +|.+++.....     .+++..++.++.||+.||.|||++||+|+|||+
T Consensus        75 ~~~lv~Ey~~gg~L~~~l~~~~~-----~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp  130 (331)
T cd05624          75 YLYLVMDYYVGGDLLTLLSKFED-----RLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKP  130 (331)
T ss_pred             EEEEEEeCCCCCcHHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCCeeeccCch
Confidence            99999999976 99999986432     289999999999999999999999999999996

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.78  E-value=3.4e-18  Score=173.62  Aligned_cols=124  Identities=22%  Similarity=0.258  Sum_probs=110.3

Q ss_pred             ceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC----hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCE
Q 008813          415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND----KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH  490 (552)
Q Consensus       415 RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s----k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~h  490 (552)
                      .|++++.||+|+||.||+|++..+++.||||+++..    ....+.+..|++++..++|+     ++|++++++|...+.
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~-----~~i~~~~~~~~~~~~   75 (324)
T cd05587           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKP-----PFLTQLHSCFQTMDR   75 (324)
T ss_pred             CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCC-----CceeeeEEEEEcCCE
Confidence            488999999999999999999999999999999853    22345678899999999875     679999999999999


Q ss_pred             EEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          491 LFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       491 LyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      +||||||+.+ +|.+++.....      +++..++.++.||+.||.|||++||||+|||+
T Consensus        76 ~~lv~E~~~~g~L~~~~~~~~~------~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp  129 (324)
T cd05587          76 LYFVMEYVNGGDLMYHIQQVGK------FKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKL  129 (324)
T ss_pred             EEEEEcCCCCCcHHHHHHHcCC------CCHHHHHHHHHHHHHHHHHHHHCCeEecCCCH
Confidence            9999999986 99999876543      89999999999999999999999999999986

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.78  E-value=3.5e-18  Score=169.96  Aligned_cols=124  Identities=19%  Similarity=0.124  Sum_probs=109.3

Q ss_pred             eEEEEEeccCCceEEEEEEECCCCcEEEEEEEecCh----hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEE
Q 008813          416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL  491 (552)
Q Consensus       416 Y~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk----~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hL  491 (552)
                      |++.+.||+|+||.||+|.+..+++.||||++....    .....+.+|+.+++.++|      ++|+++++++...+++
T Consensus         2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~------~~iv~~~~~~~~~~~~   75 (285)
T cd05631           2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNS------RFVVSLAYAYETKDAL   75 (285)
T ss_pred             ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCC------CcEEEEEEEEccCCeE
Confidence            788999999999999999999999999999987542    122456789999999998      9999999999999999


Q ss_pred             EEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          492 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       492 yIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ++||||+.+ +|..++......    ++++..++.++.||+.||.|||+++|||+|||+
T Consensus        76 ~lv~e~~~~g~L~~~~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp  130 (285)
T cd05631          76 CLVLTIMNGGDLKFHIYNMGNP----GFDEQRAIFYAAELCCGLEDLQRERIVYRDLKP  130 (285)
T ss_pred             EEEEEecCCCcHHHHHHhhCCC----CCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCH
Confidence            999999986 898887654332    289999999999999999999999999999986

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>PHA03212 serine/threonine kinase US3; Provisional

Probab=99.78  E-value=1.9e-18  Score=182.39  Aligned_cols=120  Identities=14%  Similarity=0.165  Sum_probs=110.5

Q ss_pred             cCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEEE
Q 008813          413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLF  492 (552)
Q Consensus       413 ~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hLy  492 (552)
                      ..+|++++.||+|+||.||+|.+..+++.||||+...     ..+.+|+++|+.|+|      ||||+++++|....+.|
T Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~-----~~~~~E~~il~~l~H------pnIv~~~~~~~~~~~~~  159 (391)
T PHA03212         91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQR-----GGTATEAHILRAINH------PSIIQLKGTFTYNKFTC  159 (391)
T ss_pred             cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhh-----hhhHHHHHHHHhCCC------CCCCCEeEEEEECCeeE
Confidence            4689999999999999999999999999999997642     356799999999998      99999999999999999


Q ss_pred             EEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          493 IVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       493 IVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      +|||++.++|..++.....      +++..++.|+.||+.||.|||++||||+|||+
T Consensus       160 lv~e~~~~~L~~~l~~~~~------l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP  210 (391)
T PHA03212        160 LILPRYKTDLYCYLAAKRN------IAICDILAIERSVLRAIQYLHENRIIHRDIKA  210 (391)
T ss_pred             EEEecCCCCHHHHHHhcCC------CCHHHHHHHHHHHHHHHHHHHhCCcccCCCCh
Confidence            9999999999999876543      89999999999999999999999999999996

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.78  E-value=3.6e-18  Score=169.82  Aligned_cols=125  Identities=18%  Similarity=0.128  Sum_probs=109.9

Q ss_pred             ceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecCh----hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCE
Q 008813          415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH  490 (552)
Q Consensus       415 RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk----~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~h  490 (552)
                      .|++.++||+|+||.||++.+..+++.||||++....    .....+.+|+.+++.++|      +||+++++.+..+++
T Consensus         1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h------~~iv~~~~~~~~~~~   74 (285)
T cd05605           1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNS------RFVVSLAYAYETKDA   74 (285)
T ss_pred             CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCC------CCEeeeeeeecCCCe
Confidence            4889999999999999999999999999999997532    122456789999999998      999999999999999


Q ss_pred             EEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          491 LFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       491 LyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      +|+||||+.+ +|..++......    .+++..++.++.||+.||.|||+++|||++|++
T Consensus        75 ~~lv~e~~~~~~L~~~~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp  130 (285)
T cd05605          75 LCLVLTLMNGGDLKFHIYNMGNP----GFDEERAVFYAAEITCGLEDLHRERIVYRDLKP  130 (285)
T ss_pred             EEEEEeccCCCcHHHHHHhcCcC----CCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCH
Confidence            9999999986 898888754322    289999999999999999999999999999986

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.78  E-value=2.8e-18  Score=179.29  Aligned_cols=125  Identities=15%  Similarity=0.142  Sum_probs=111.7

Q ss_pred             ecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecCh----hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEe
Q 008813          412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH  487 (552)
Q Consensus       412 i~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk----~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~  487 (552)
                      ..++|++++.||+|+||.||++.+..+++.||+|++.+..    .....+.+|+.+++.++|      |||++++++|..
T Consensus        41 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~h------p~iv~~~~~~~~  114 (370)
T cd05621          41 KAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANS------PWVVQLFCAFQD  114 (370)
T ss_pred             CHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCC------CCEeeEEEEEEc
Confidence            3468999999999999999999999999999999997531    123457789999999998      999999999999


Q ss_pred             CCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          488 LEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       488 ~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      .+++||||||+.+ +|.++++...       +++..++.++.||+.||.|||+++|||+|||+
T Consensus       115 ~~~~~lv~Ey~~gg~L~~~l~~~~-------~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp  170 (370)
T cd05621         115 DKYLYMVMEYMPGGDLVNLMSNYD-------VPEKWAKFYTAEVVLALDAIHSMGLIHRDVKP  170 (370)
T ss_pred             CCEEEEEEcCCCCCcHHHHHHhcC-------CCHHHHHHHHHHHHHHHHHHHHCCeEecCCCH
Confidence            9999999999976 9999987542       79999999999999999999999999999996

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.78  E-value=3.6e-18  Score=171.47  Aligned_cols=125  Identities=22%  Similarity=0.204  Sum_probs=112.1

Q ss_pred             CceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecCh--hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEE
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL  491 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk--~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hL  491 (552)
                      ++|.+++.||+|+||.||+|++..+++.||||+++...  .....+.+|+.+++.++|      +||+++++++...+++
T Consensus         6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h------~~iv~~~~~~~~~~~~   79 (309)
T cd07872           6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKH------ANIVTLHDIVHTDKSL   79 (309)
T ss_pred             CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCC------CCcceEEEEEeeCCeE
Confidence            67999999999999999999999999999999997542  223457789999999998      9999999999999999


Q ss_pred             EEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          492 FIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       492 yIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      |+||||+.++|.+++.....     .+++..++.++.||+.||.|||++||||+||++
T Consensus        80 ~lv~e~~~~~l~~~~~~~~~-----~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp  132 (309)
T cd07872          80 TLVFEYLDKDLKQYMDDCGN-----IMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKP  132 (309)
T ss_pred             EEEEeCCCCCHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCH
Confidence            99999999999998876543     278999999999999999999999999999986

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=99.78  E-value=3.4e-18  Score=175.99  Aligned_cols=133  Identities=23%  Similarity=0.266  Sum_probs=114.1

Q ss_pred             CcceeeCc---eecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC---hhhHHHHHHHHHHHHHhcccCCCCCC
Q 008813          403 DLPIILNT---VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEH  476 (552)
Q Consensus       403 ~y~v~~gd---vi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s---k~~~~~~lrEIkILk~L~hhd~~d~p  476 (552)
                      .|.+..++   .+.++|++++.||+|+||.||+|.+..+++.||||++...   ......+.+|+.+++.++|      +
T Consensus         7 ~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h------~   80 (359)
T cd07876           7 FYSVQVADSTFTVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNH------K   80 (359)
T ss_pred             cceecccchhhhhhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCC------C
Confidence            45555555   4568999999999999999999999999999999999653   2334567899999999998      9


Q ss_pred             CeeEeEeEEEeCC------EEEEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          477 HILRLYDYFYHLE------HLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       477 nIVrL~d~F~~~~------hLyIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ||++++++|....      .+|+||||+.++|.+.+...        +++..++.++.||+.||.|||++||||+|||+
T Consensus        81 niv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~--------~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp  151 (359)
T cd07876          81 NIISLLNVFTPQKSLEEFQDVYLVMELMDANLCQVIHME--------LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKP  151 (359)
T ss_pred             CEeeeeeeeccCCCccccceeEEEEeCCCcCHHHHHhcc--------CCHHHHHHHHHHHHHHHHHHHhCCcccCCCCH
Confidence            9999999987543      58999999999988877431        78999999999999999999999999999986

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=99.78  E-value=2.4e-19  Score=194.20  Aligned_cols=124  Identities=17%  Similarity=0.289  Sum_probs=115.6

Q ss_pred             CceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC---hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCE
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH  490 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s---k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~h  490 (552)
                      ++|.+.+.||+|+||+||+|+.+.+.+.||||.|.+.   ++..+.+.+|++|++.|+|      ||||.++++|++..|
T Consensus         2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkH------pniv~m~esfEt~~~   75 (808)
T KOG0597|consen    2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKH------PNIVEMLESFETSAH   75 (808)
T ss_pred             cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCC------cchhhHHHhhcccce
Confidence            5799999999999999999999999999999999764   3345678999999999999      999999999999999


Q ss_pred             EEEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          491 LFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       491 LyIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      +|+|+||+.|+|+.+|.....      ++|+.++.|+.|++.||.|||+++|+|+|+|+
T Consensus        76 ~~vVte~a~g~L~~il~~d~~------lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kP  128 (808)
T KOG0597|consen   76 LWVVTEYAVGDLFTILEQDGK------LPEEQVRAIAYDLVSALYYLHSNRILHRDMKP  128 (808)
T ss_pred             EEEEehhhhhhHHHHHHhccC------CCHHHHHHHHHHHHHHHHHHHhcCcccccCCc
Confidence            999999999999999998765      99999999999999999999999999999975

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.77  E-value=2.6e-18  Score=182.52  Aligned_cols=128  Identities=20%  Similarity=0.248  Sum_probs=116.4

Q ss_pred             ceecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChh----hHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEE
Q 008813          410 TVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD----FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYF  485 (552)
Q Consensus       410 dvi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~----~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F  485 (552)
                      ..+..+|++.+.||+|.||+||+|+.+.+|+.+|+|+|.+...    ....+.+|+.||++|..|     ||||++++.|
T Consensus        31 ~~~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~h-----pniv~l~~~~  105 (382)
T KOG0032|consen   31 EDIKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGH-----PNIVQLKDAF  105 (382)
T ss_pred             ccccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCC-----CCEEEEEEEE
Confidence            3456789999999999999999999999999999999987533    235789999999999943     9999999999


Q ss_pred             EeCCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          486 YHLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       486 ~~~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      .....++||||+|.| .|++.|... .      +++..+..+++||+.|+.|||+.||||+|||+
T Consensus       106 e~~~~~~lvmEL~~GGeLfd~i~~~-~------~sE~da~~~~~~il~av~~lH~~gvvHrDlKp  163 (382)
T KOG0032|consen  106 EDPDSVYLVMELCEGGELFDRIVKK-H------YSERDAAGIIRQILEAVKYLHSLGVVHRDLKP  163 (382)
T ss_pred             EcCCeEEEEEEecCCchHHHHHHHc-c------CCHHHHHHHHHHHHHHHHHHHhCCceeccCCH
Confidence            999999999999987 999999876 1      89999999999999999999999999999996

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.77  E-value=3.6e-18  Score=176.31  Aligned_cols=127  Identities=19%  Similarity=0.290  Sum_probs=112.0

Q ss_pred             eecCceEEEEEeccCCceEEEEEEECCCC-cEEEEEEEecC----hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEE
Q 008813          411 VIAGRYYVTEYLGSAAFSKVFQAQDLHTG-VDVCLKIIKND----KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYF  485 (552)
Q Consensus       411 vi~~RY~Ile~LGkG~FG~VykA~Dkktg-~~VAVKIIk~s----k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F  485 (552)
                      +..++|.+.+.||+|+||.||+|.+..++ ..||||++...    ....+.+.+|+.+++.++|      |||+++++++
T Consensus        27 ~~~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h------p~Iv~~~~~~  100 (340)
T PTZ00426         27 MKYEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINH------PFCVNLYGSF  100 (340)
T ss_pred             CChhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCC------CCCcceEEEE
Confidence            44567999999999999999999877654 68999999753    2234567899999999998      9999999999


Q ss_pred             EeCCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          486 YHLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       486 ~~~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ...+++||||||+.+ +|.+++.....      +++..++.++.||+.||.|||++||||+|||+
T Consensus       101 ~~~~~~~lv~Ey~~~g~L~~~i~~~~~------~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp  159 (340)
T PTZ00426        101 KDESYLYLVLEFVIGGEFFTFLRRNKR------FPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKP  159 (340)
T ss_pred             EeCCEEEEEEeCCCCCcHHHHHHHcCC------CCHHHHHHHHHHHHHHHHHHHHCCeEccCCCH
Confidence            999999999999976 99999987543      89999999999999999999999999999996

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=99.77  E-value=5.8e-19  Score=182.20  Aligned_cols=126  Identities=21%  Similarity=0.236  Sum_probs=113.1

Q ss_pred             cCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChh---hHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeC-
Q 008813          413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD---FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL-  488 (552)
Q Consensus       413 ~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~---~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~-  488 (552)
                      .+.|+.+..|++|+||.||+|+|++|++.||+|.++..+.   +--..+|||.+|.+++|      ||||.+.....-. 
T Consensus        75 v~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H------~NIV~vkEVVvG~~  148 (419)
T KOG0663|consen   75 VEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARH------PNIVEVKEVVVGSN  148 (419)
T ss_pred             HHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCC------CCeeeeEEEEeccc
Confidence            3569999999999999999999999999999999987532   33467899999999998      9999999988744 


Q ss_pred             -CEEEEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          489 -EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       489 -~hLyIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                       +.+|||||||..+|..++...+.     +|...+++.++.|++.||+|||.+.|||+|||.
T Consensus       149 ~d~iy~VMe~~EhDLksl~d~m~q-----~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~  205 (419)
T KOG0663|consen  149 MDKIYIVMEYVEHDLKSLMETMKQ-----PFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKT  205 (419)
T ss_pred             cceeeeeHHHHHhhHHHHHHhccC-----CCchHHHHHHHHHHHHHHHHHhhceeEecccch
Confidence             67999999999999999987663     399999999999999999999999999999995

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.77  E-value=4.2e-18  Score=177.73  Aligned_cols=126  Identities=16%  Similarity=0.143  Sum_probs=112.0

Q ss_pred             eecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecCh----hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEE
Q 008813          411 VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFY  486 (552)
Q Consensus       411 vi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk----~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~  486 (552)
                      +..++|++++.||+|+||.||+|+++.+++.||+|++....    .....+.+|+.+++.++|      |||+++++++.
T Consensus        40 ~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~h------p~iv~~~~~~~  113 (371)
T cd05622          40 MKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANS------PWVVQLFYAFQ  113 (371)
T ss_pred             cchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCC------CCCCeEEEEEE
Confidence            34478999999999999999999999999999999997532    223456789999999998      99999999999


Q ss_pred             eCCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          487 HLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       487 ~~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ..+++||||||+.+ +|.++++...       +++..++.++.||+.||.|||++||||+|||+
T Consensus       114 ~~~~~~lv~Ey~~gg~L~~~~~~~~-------~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp  170 (371)
T cd05622         114 DDRYLYMVMEYMPGGDLVNLMSNYD-------VPEKWARFYTAEVVLALDAIHSMGFIHRDVKP  170 (371)
T ss_pred             cCCEEEEEEcCCCCCcHHHHHHhcC-------CCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCH
Confidence            99999999999976 9999987542       89999999999999999999999999999997

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=99.77  E-value=7.3e-19  Score=185.16  Aligned_cols=129  Identities=16%  Similarity=0.217  Sum_probs=117.2

Q ss_pred             eecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC----hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEE
Q 008813          411 VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND----KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFY  486 (552)
Q Consensus       411 vi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s----k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~  486 (552)
                      +-..+|++++.||+|.-|.||+|+...++..+|||++.+.    +....+++.|.+||+.+.|      |.++.||..|.
T Consensus        74 l~l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDH------PFlPTLYa~fe  147 (459)
T KOG0610|consen   74 LGLRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDH------PFLPTLYASFE  147 (459)
T ss_pred             cCHHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCC------Cccchhhheee
Confidence            3446799999999999999999999999999999999874    3345678899999999999      99999999999


Q ss_pred             eCCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          487 HLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       487 ~~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ....+|+|||||.| +|..+.++...+.    |++..++.|+.+|+.||+|||-+|||++|||+
T Consensus       148 t~~~~cl~meyCpGGdL~~LrqkQp~~~----fse~~aRFYaAEvl~ALEYLHmlGivYRDLKP  207 (459)
T KOG0610|consen  148 TDKYSCLVMEYCPGGDLHSLRQKQPGKR----FSESAARFYAAEVLLALEYLHMLGIVYRDLKP  207 (459)
T ss_pred             ccceeEEEEecCCCccHHHHHhhCCCCc----cchhhHHHHHHHHHHHHHHHHhhceeeccCCc
Confidence            99999999999987 9999888766544    99999999999999999999999999999997

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.77  E-value=4.4e-18  Score=177.30  Aligned_cols=124  Identities=15%  Similarity=0.116  Sum_probs=111.0

Q ss_pred             cCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecCh----hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeC
Q 008813          413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL  488 (552)
Q Consensus       413 ~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk----~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~  488 (552)
                      ..+|++++.||+|+||.||+|++..+++.||||++....    .....+.+|+.+++.++|      |||+++++++...
T Consensus        42 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h------~~iv~~~~~~~~~  115 (370)
T cd05596          42 AEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANS------EWIVQLHYAFQDD  115 (370)
T ss_pred             HHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCC------CCcceEEEEEecC
Confidence            467999999999999999999999999999999997532    223456789999999998      9999999999999


Q ss_pred             CEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          489 EHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       489 ~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      +++||||||+.+ +|.+++....       +++..++.++.||+.||.|||++||||+|||+
T Consensus       116 ~~~~lv~Ey~~gg~L~~~l~~~~-------l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp  170 (370)
T cd05596         116 KYLYMVMEYMPGGDLVNLMSNYD-------IPEKWARFYTAEVVLALDAIHSMGFIHRDVKP  170 (370)
T ss_pred             CEEEEEEcCCCCCcHHHHHHhcC-------CCHHHHHHHHHHHHHHHHHHHHCCeeccCCCH
Confidence            999999999976 9999887542       89999999999999999999999999999996

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=99.77  E-value=7.3e-18  Score=171.17  Aligned_cols=124  Identities=16%  Similarity=0.287  Sum_probs=109.0

Q ss_pred             ceEEEEEeccCCceEEEEEEEC---CCCcEEEEEEEecCh-----hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEE
Q 008813          415 RYYVTEYLGSAAFSKVFQAQDL---HTGVDVCLKIIKNDK-----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFY  486 (552)
Q Consensus       415 RY~Ile~LGkG~FG~VykA~Dk---ktg~~VAVKIIk~sk-----~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~  486 (552)
                      .|++++.||+|+||.||++++.   .+++.||+|++++..     ...+...+|+.+|+.+++|     ++|++++++|.
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~-----~~i~~~~~~~~   75 (332)
T cd05614           1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQS-----PFLVTLHYAFQ   75 (332)
T ss_pred             CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCC-----CCcccEEEEEe
Confidence            4889999999999999999874   478999999997531     2335678899999999765     99999999999


Q ss_pred             eCCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          487 HLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       487 ~~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ..+.++|||||+.+ +|.+++..+..      +++..++.++.||+.||.|||++||||+|||+
T Consensus        76 ~~~~~~lv~e~~~~g~L~~~l~~~~~------~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp  133 (332)
T cd05614          76 TEAKLHLILDYVSGGEMFTHLYQRDN------FSEDEVRFYSGEIILALEHLHKLGIVYRDIKL  133 (332)
T ss_pred             cCCEEEEEEeCCCCCcHHHHHHHcCC------CCHHHHHHHHHHHHHHHHHHHHCCcEecCCCH
Confidence            99999999999987 99999876543      89999999999999999999999999999997

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.77  E-value=4.9e-18  Score=172.91  Aligned_cols=118  Identities=21%  Similarity=0.277  Sum_probs=105.8

Q ss_pred             EEeccCCceEEEEEEECCCCcEEEEEEEecC----hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEEEEEE
Q 008813          420 EYLGSAAFSKVFQAQDLHTGVDVCLKIIKND----KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVC  495 (552)
Q Consensus       420 e~LGkG~FG~VykA~Dkktg~~VAVKIIk~s----k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hLyIVm  495 (552)
                      +.||+|+||.||++++..+++.||+|+++..    +.....+.+|+++++.++|      |||++++++|...+++||||
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~h------p~i~~~~~~~~~~~~~~lv~   74 (323)
T cd05595           1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH------PFLTALKYAFQTHDRLCFVM   74 (323)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCC------CCCcceeeEEecCCEEEEEE
Confidence            3689999999999999999999999999863    2234567789999999998      99999999999999999999


Q ss_pred             ecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          496 ELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       496 Ell~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ||+.+ +|..++.....      +++..++.++.||+.||.|||++||||+|||+
T Consensus        75 E~~~~~~L~~~l~~~~~------~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp  123 (323)
T cd05595          75 EYANGGELFFHLSRERV------FTEERARFYGAEIVSALEYLHSRDVVYRDIKL  123 (323)
T ss_pred             eCCCCCcHHHHHHHcCC------CCHHHHHHHHHHHHHHHHHHHHCCeEecCCCH
Confidence            99987 89888876543      89999999999999999999999999999996

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.77  E-value=4.9e-18  Score=166.65  Aligned_cols=126  Identities=15%  Similarity=0.128  Sum_probs=110.2

Q ss_pred             CceEEEEEeccCCceEEEEEEEC---CCCcEEEEEEEecC--hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeC
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDL---HTGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL  488 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dk---ktg~~VAVKIIk~s--k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~  488 (552)
                      .+|++.+.||+|+||.||+|.++   ..+..||+|+++..  ......+.+|+.+++.++|      |||+++++++...
T Consensus         5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h------~~iv~~~~~~~~~   78 (266)
T cd05064           5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDH------SNIVRLEGVITRG   78 (266)
T ss_pred             HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCC------CCcCeEEEEEecC
Confidence            57999999999999999999865   44678999999864  2334567899999999988      9999999999999


Q ss_pred             CEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          489 EHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       489 ~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      ++++|||||+.+ +|.++++....     .+++..++.++.||+.||.|||+++|||++|++-
T Consensus        79 ~~~~lv~e~~~~~~L~~~l~~~~~-----~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~  136 (266)
T cd05064          79 NTMMIVTEYMSNGALDSFLRKHEG-----QLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAH  136 (266)
T ss_pred             CCcEEEEEeCCCCcHHHHHHhCCC-----CCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHh
Confidence            999999999987 89999876532     2899999999999999999999999999999873

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.77  E-value=7.5e-18  Score=168.45  Aligned_cols=133  Identities=19%  Similarity=0.229  Sum_probs=110.6

Q ss_pred             ecCceEEEEEeccCCceEEEEEEECC----------------CCcEEEEEEEecC--hhhHHHHHHHHHHHHHhcccCCC
Q 008813          412 IAGRYYVTEYLGSAAFSKVFQAQDLH----------------TGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPA  473 (552)
Q Consensus       412 i~~RY~Ile~LGkG~FG~VykA~Dkk----------------tg~~VAVKIIk~s--k~~~~~~lrEIkILk~L~hhd~~  473 (552)
                      ..++|++.++||+|+||.||+|.+..                ++..||||+++..  ......+.+|+++|+.++|    
T Consensus         3 ~~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h----   78 (304)
T cd05096           3 PRGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKD----   78 (304)
T ss_pred             chhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCC----
Confidence            45789999999999999999998532                3457999999764  3345678899999999998    


Q ss_pred             CCCCeeEeEeEEEeCCEEEEEEecCCC-CHHHHHHhhccCC-------------CCcCCCHHHHHHHHHHHHHHHHHHHh
Q 008813          474 DEHHILRLYDYFYHLEHLFIVCELLRA-NLYEFQKFNQESG-------------GEAYFTLGRLQVCSTFLLTLLMLIFL  539 (552)
Q Consensus       474 d~pnIVrL~d~F~~~~hLyIVmEll~G-sL~d~Lk~~~~~g-------------~~~pLSe~~I~~Ia~QIL~AL~YLHs  539 (552)
                        +||+++++++...+.+||||||+.+ +|.+++.......             ....+++..+..|+.||+.||.|||+
T Consensus        79 --~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~  156 (304)
T cd05096          79 --PNIIRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSS  156 (304)
T ss_pred             --CCeeEEEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHH
Confidence              9999999999999999999999976 9999987542110             01126788899999999999999999


Q ss_pred             CCCeeeecccc
Q 008813          540 LLVIYFILFCF  550 (552)
Q Consensus       540 ~gIIH~~L~~~  550 (552)
                      +||||+|||+-
T Consensus       157 ~~ivH~dlkp~  167 (304)
T cd05096         157 LNFVHRDLATR  167 (304)
T ss_pred             CCccccCcchh
Confidence            99999999974

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.76  E-value=6.2e-18  Score=172.18  Aligned_cols=124  Identities=22%  Similarity=0.256  Sum_probs=109.7

Q ss_pred             ceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecCh----hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCE
Q 008813          415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH  490 (552)
Q Consensus       415 RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk----~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~h  490 (552)
                      .|.+.+.||+|+||.||+|+++.+++.||||+++...    ........|+.+++.+.|+     ++|+++++++...+.
T Consensus         1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~-----~~i~~~~~~~~~~~~   75 (323)
T cd05615           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKP-----PFLTQLHSCFQTVDR   75 (323)
T ss_pred             CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCC-----CchhheeeEEecCCE
Confidence            3778899999999999999999999999999998542    2234577899999988875     889999999999999


Q ss_pred             EEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          491 LFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       491 LyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      +||||||+.+ +|.++++....      +++..++.|+.||+.||.|||++||||+|||+
T Consensus        76 ~~lv~Ey~~~g~L~~~i~~~~~------l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp  129 (323)
T cd05615          76 LYFVMEYVNGGDLMYHIQQVGK------FKEPQAVFYAAEISVGLFFLHRRGIIYRDLKL  129 (323)
T ss_pred             EEEEEcCCCCCcHHHHHHHcCC------CCHHHHHHHHHHHHHHHHHHHHCCeeccCCCH
Confidence            9999999986 99999876543      89999999999999999999999999999986

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=99.76  E-value=1.3e-17  Score=160.47  Aligned_cols=123  Identities=22%  Similarity=0.320  Sum_probs=110.7

Q ss_pred             eEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChhhH---HHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEEE
Q 008813          416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFF---DQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLF  492 (552)
Q Consensus       416 Y~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~~~---~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hLy  492 (552)
                      |++++.||+|+||.||++.+..+++.||+|++.......   ....+|+.+++.++|      +||+++++++.....++
T Consensus         1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~------~~i~~~~~~~~~~~~~~   74 (260)
T PF00069_consen    1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRH------PNIVQILDVFQDDNYLY   74 (260)
T ss_dssp             EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTB------TTBCHEEEEEEESSEEE
T ss_pred             CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhccccccc------ccccccccccccccccc
Confidence            889999999999999999999999999999998763322   234569999999987      99999999999999999


Q ss_pred             EEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          493 IVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       493 IVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      +|||++.+ +|.+++.....      +++..+..++.||+.||.+||+++|+|+||++-
T Consensus        75 ~v~~~~~~~~L~~~l~~~~~------~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~  127 (260)
T PF00069_consen   75 IVMEYCPGGSLQDYLQKNKP------LSEEEILKIAYQILEALAYLHSKGIVHRDIKPE  127 (260)
T ss_dssp             EEEEEETTEBHHHHHHHHSS------BBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGG
T ss_pred             cccccccccccccccccccc------ccccccccccccccccccccccccccccccccc
Confidence            99999999 99999994433      899999999999999999999999999999874

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.76  E-value=8.8e-18  Score=167.73  Aligned_cols=125  Identities=21%  Similarity=0.192  Sum_probs=112.4

Q ss_pred             CceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC--hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEE
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL  491 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s--k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hL  491 (552)
                      ++|++++.||+|+||.||+|.+..+++.||+|.++..  ......+.+|+.+++.++|      +||+++++++...+.+
T Consensus         6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h------~nI~~~~~~~~~~~~~   79 (301)
T cd07873           6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKH------ANIVTLHDIIHTEKSL   79 (301)
T ss_pred             cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCC------CCcceEEEEEecCCeE
Confidence            5799999999999999999999999999999999754  2223467789999999998      9999999999999999


Q ss_pred             EEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          492 FIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       492 yIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ++||||+.++|.+++.....     .+++..++.++.||+.||.|||+++|+|.+|++
T Consensus        80 ~lv~e~~~~~l~~~l~~~~~-----~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp  132 (301)
T cd07873          80 TLVFEYLDKDLKQYLDDCGN-----SINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKP  132 (301)
T ss_pred             EEEEeccccCHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCH
Confidence            99999999999998876543     289999999999999999999999999999986

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.76  E-value=7.1e-18  Score=171.25  Aligned_cols=124  Identities=19%  Similarity=0.260  Sum_probs=105.6

Q ss_pred             eEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC----hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEE
Q 008813          416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND----KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL  491 (552)
Q Consensus       416 Y~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s----k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hL  491 (552)
                      |++++.||+|+||.||+|.+..+++.||||+++..    ....+.+.+|++++..++.   ..||||+++++++...+++
T Consensus         1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~---l~hp~i~~~~~~~~~~~~~   77 (324)
T cd05589           1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANS---ERHPFLVNLFACFQTEDHV   77 (324)
T ss_pred             CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccc---cCCCChhceeeEEEcCCEE
Confidence            67899999999999999999999999999999853    2234567778777655432   1229999999999999999


Q ss_pred             EEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          492 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       492 yIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ||||||+.+ +|..++....       +++..++.++.||+.||.|||++||||+|||+
T Consensus        78 ~lv~E~~~~~~L~~~~~~~~-------l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp  129 (324)
T cd05589          78 CFVMEYAAGGDLMMHIHTDV-------FSEPRAVFYAACVVLGLQYLHENKIVYRDLKL  129 (324)
T ss_pred             EEEEcCCCCCcHHHHhhcCC-------CCHHHHHHHHHHHHHHHHHHHhCCeEecCCCH
Confidence            999999987 8988775422       89999999999999999999999999999986

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.76  E-value=6.1e-18  Score=172.84  Aligned_cols=118  Identities=22%  Similarity=0.295  Sum_probs=105.9

Q ss_pred             EEeccCCceEEEEEEECCCCcEEEEEEEecC----hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEEEEEE
Q 008813          420 EYLGSAAFSKVFQAQDLHTGVDVCLKIIKND----KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVC  495 (552)
Q Consensus       420 e~LGkG~FG~VykA~Dkktg~~VAVKIIk~s----k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hLyIVm  495 (552)
                      +.||+|+||.||+|++..+++.||||++...    ......+.+|+++|+.++|      |||+++++++...+++||||
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~h------p~iv~~~~~~~~~~~~~lv~   74 (328)
T cd05593           1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRH------PFLTSLKYSFQTKDRLCFVM   74 (328)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCC------CCCcceEEEEEcCCEEEEEE
Confidence            3689999999999999999999999999853    2234567889999999998      99999999999999999999


Q ss_pred             ecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          496 ELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       496 Ell~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ||+.+ +|..++.....      +++..++.|+.||+.||.|||++||||+|||+
T Consensus        75 Ey~~~g~L~~~l~~~~~------l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp  123 (328)
T cd05593          75 EYVNGGELFFHLSRERV------FSEDRTRFYGAEIVSALDYLHSGKIVYRDLKL  123 (328)
T ss_pred             eCCCCCCHHHHHHhcCC------CCHHHHHHHHHHHHHHHHHHHhCCeEecccCH
Confidence            99987 89888876543      89999999999999999999999999999996

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.76  E-value=6.6e-18  Score=170.62  Aligned_cols=116  Identities=27%  Similarity=0.322  Sum_probs=104.8

Q ss_pred             eccCCceEEEEEEECCCCcEEEEEEEecC----hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEEEEEEec
Q 008813          422 LGSAAFSKVFQAQDLHTGVDVCLKIIKND----KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCEL  497 (552)
Q Consensus       422 LGkG~FG~VykA~Dkktg~~VAVKIIk~s----k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hLyIVmEl  497 (552)
                      ||+|+||.||+|++..+++.||||+++..    ......+.+|+.+|+.++|      |||+++++++...+.+||||||
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h------~~iv~~~~~~~~~~~~~lv~e~   74 (312)
T cd05585           1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNC------PFIVPLKFSFQSPEKLYLVLAF   74 (312)
T ss_pred             CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCC------CcEeceeeEEecCCeEEEEEcC
Confidence            79999999999999999999999999753    2234567889999999998      9999999999999999999999


Q ss_pred             CCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          498 LRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       498 l~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      +.+ +|.+++.....      +++..++.++.||+.||.|||++||+|+|||+
T Consensus        75 ~~~g~L~~~l~~~~~------~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp  121 (312)
T cd05585          75 INGGELFHHLQREGR------FDLSRARFYTAELLCALENLHKFNVIYRDLKP  121 (312)
T ss_pred             CCCCcHHHHHHhcCC------CCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCH
Confidence            987 99999986543      89999999999999999999999999999996

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.76  E-value=1.1e-17  Score=170.56  Aligned_cols=125  Identities=12%  Similarity=0.074  Sum_probs=110.2

Q ss_pred             CceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecCh----hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCC
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE  489 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk----~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~  489 (552)
                      ++|+++++||+|+||.||++.++.+++.||+|++.+..    .....+..|+.++..++|      ++|+++++++...+
T Consensus         1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~------~~i~~~~~~~~~~~   74 (332)
T cd05623           1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDN------QWITTLHYAFQDEN   74 (332)
T ss_pred             CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCC------CCEeeEEEEEecCC
Confidence            36999999999999999999999999999999997531    223446788999998888      99999999999999


Q ss_pred             EEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          490 HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       490 hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ++||||||+.+ +|.+++.....     .+++..++.|+.||+.||.|||+++|||+|||+
T Consensus        75 ~~~lv~ey~~~g~L~~~l~~~~~-----~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp  130 (332)
T cd05623          75 NLYLVMDYYVGGDLLTLLSKFED-----RLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKP  130 (332)
T ss_pred             EEEEEEeccCCCcHHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCH
Confidence            99999999876 99999986432     289999999999999999999999999999996

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.76  E-value=1.1e-17  Score=169.88  Aligned_cols=124  Identities=22%  Similarity=0.245  Sum_probs=109.3

Q ss_pred             ceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecCh----hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCE
Q 008813          415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH  490 (552)
Q Consensus       415 RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk----~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~h  490 (552)
                      .|.+++.||+|+||.||+|++..+++.||||++++..    ........|..++..+.+|     ++|+++++++...++
T Consensus         1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~-----~~i~~~~~~~~~~~~   75 (323)
T cd05616           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKP-----PFLTQLHSCFQTMDR   75 (323)
T ss_pred             CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCC-----CeEeeEEEEEecCCE
Confidence            3788999999999999999999999999999998642    2234567788888888765     899999999999999


Q ss_pred             EEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          491 LFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       491 LyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      +||||||+.+ +|..++.....      +++..++.++.||+.||.|||++||||+|||+
T Consensus        76 ~~lv~E~~~~g~L~~~~~~~~~------~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp  129 (323)
T cd05616          76 LYFVMEYVNGGDLMYQIQQVGR------FKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKL  129 (323)
T ss_pred             EEEEEcCCCCCCHHHHHHHcCC------CCHHHHHHHHHHHHHHHHHHHHCCEEecCCCH
Confidence            9999999986 99998876543      89999999999999999999999999999986

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=99.76  E-value=6.9e-18  Score=173.19  Aligned_cols=133  Identities=21%  Similarity=0.240  Sum_probs=114.1

Q ss_pred             CcceeeCc---eecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC---hhhHHHHHHHHHHHHHhcccCCCCCC
Q 008813          403 DLPIILNT---VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEH  476 (552)
Q Consensus       403 ~y~v~~gd---vi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s---k~~~~~~lrEIkILk~L~hhd~~d~p  476 (552)
                      .|++..++   .+.+||++++.||+|+||.||+|.+..+++.||||++...   ......+.+|+.+++.++|      +
T Consensus         3 ~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h------~   76 (355)
T cd07874           3 FYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH------K   76 (355)
T ss_pred             ceeeccCchhhhhhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCC------C
Confidence            45555555   3568999999999999999999999999999999999753   2334567899999999998      9


Q ss_pred             CeeEeEeEEEeC------CEEEEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          477 HILRLYDYFYHL------EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       477 nIVrL~d~F~~~------~hLyIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ||++++++|...      ..+|+||||+.++|.+.+...        +++..++.++.||+.||.|||++||||+|||+
T Consensus        77 niv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~--------l~~~~~~~~~~qi~~aL~~LH~~givHrDikp  147 (355)
T cd07874          77 NIISLLNVFTPQKSLEEFQDVYLVMELMDANLCQVIQME--------LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKP  147 (355)
T ss_pred             chhceeeeeeccccccccceeEEEhhhhcccHHHHHhhc--------CCHHHHHHHHHHHHHHHHHHHhCCcccCCCCh
Confidence            999999998644      358999999999988877531        78999999999999999999999999999986

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.76  E-value=5.1e-18  Score=172.45  Aligned_cols=135  Identities=19%  Similarity=0.197  Sum_probs=109.3

Q ss_pred             eecCceEEEEEeccCCceEEEEEEEC-----CCCcEEEEEEEecC--hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEe
Q 008813          411 VIAGRYYVTEYLGSAAFSKVFQAQDL-----HTGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYD  483 (552)
Q Consensus       411 vi~~RY~Ile~LGkG~FG~VykA~Dk-----ktg~~VAVKIIk~s--k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d  483 (552)
                      +..+||++.+.||+|+||.||+|.+.     .+++.||||+++..  ......+.+|+.+|+.+.+|     ||||++++
T Consensus         4 ~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h-----~niv~~~~   78 (338)
T cd05102           4 FPRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNH-----LNVVNLLG   78 (338)
T ss_pred             cchhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccC-----cceeeEEe
Confidence            44578999999999999999999753     34578999999753  22345788999999999433     99999999


Q ss_pred             EEEeC-CEEEEEEecCCC-CHHHHHHhhccCC------------------------------------------------
Q 008813          484 YFYHL-EHLFIVCELLRA-NLYEFQKFNQESG------------------------------------------------  513 (552)
Q Consensus       484 ~F~~~-~hLyIVmEll~G-sL~d~Lk~~~~~g------------------------------------------------  513 (552)
                      ++... ..+++||||+.+ +|.+++.......                                                
T Consensus        79 ~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (338)
T cd05102          79 ACTKPNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTN  158 (338)
T ss_pred             EecCCCCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccc
Confidence            88764 468999999987 9999997543110                                                


Q ss_pred             --------CCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          514 --------GEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       514 --------~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                              ...++++..+..|+.||+.||.|||++||||+|||+-
T Consensus       159 ~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~  203 (338)
T cd05102         159 PPQETDDLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAAR  203 (338)
T ss_pred             cchhccccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccc
Confidence                    0124788999999999999999999999999999973

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.76  E-value=1.6e-17  Score=169.44  Aligned_cols=126  Identities=18%  Similarity=0.139  Sum_probs=114.0

Q ss_pred             cCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC--hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCE
Q 008813          413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH  490 (552)
Q Consensus       413 ~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s--k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~h  490 (552)
                      .++|++++.||+|+||.||++++..++..||+|+++..  ......+.+|+++|+.++|      +||+++++++...+.
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h------~~iv~~~~~~~~~~~   77 (331)
T cd06649           4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNS------PYIVGFYGAFYSDGE   77 (331)
T ss_pred             cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCC------CCCCeEEEEEEECCE
Confidence            46899999999999999999999999999999999764  3345678999999999998      999999999999999


Q ss_pred             EEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhC-CCeeeecccc
Q 008813          491 LFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLL-LVIYFILFCF  550 (552)
Q Consensus       491 LyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~-gIIH~~L~~~  550 (552)
                      ++|||||+.+ +|.++++....      +++..+..++.||+.||.|||++ +|||+|||+-
T Consensus        78 ~~lv~e~~~~~~L~~~l~~~~~------~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~  133 (331)
T cd06649          78 ISICMEHMDGGSLDQVLKEAKR------IPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPS  133 (331)
T ss_pred             EEEEeecCCCCcHHHHHHHcCC------CCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChh
Confidence            9999999987 99999987543      89999999999999999999986 6999999963

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=99.76  E-value=1.4e-17  Score=164.49  Aligned_cols=129  Identities=22%  Similarity=0.272  Sum_probs=106.8

Q ss_pred             CceEEEEEeccCCceEEEEEEECC-CCcEEEEEEEecCh---hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEe--
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLH-TGVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH--  487 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkk-tg~~VAVKIIk~sk---~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~--  487 (552)
                      .+|++++.||+|+||.||+|++.. +++.||||+++...   .......+|+.+++.+..   .+||||+++++++..  
T Consensus         1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~---~~hpniv~~~~~~~~~~   77 (290)
T cd07862           1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLET---FEHPNVVRLFDVCTVSR   77 (290)
T ss_pred             CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcc---cCCCCcceEEEEEeccc
Confidence            479999999999999999999865 46889999987532   223456788888888752   112999999999863  


Q ss_pred             ---CCEEEEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          488 ---LEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       488 ---~~hLyIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                         ...+++|||++.++|.+++.......    +++..++.|+.||+.||.|||++||+|+|||+
T Consensus        78 ~~~~~~~~lv~e~~~~~l~~~~~~~~~~~----~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp  138 (290)
T cd07862          78 TDRETKLTLVFEHVDQDLTTYLDKVPEPG----VPTETIKDMMFQLLRGLDFLHSHRVVHRDLKP  138 (290)
T ss_pred             CCCCCcEEEEEccCCCCHHHHHHhCCCCC----CCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCH
Confidence               35699999999999999998654433    89999999999999999999999999999986

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=99.76  E-value=1.7e-18  Score=179.68  Aligned_cols=126  Identities=29%  Similarity=0.330  Sum_probs=114.3

Q ss_pred             ecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEec---ChhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeC
Q 008813          412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKN---DKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL  488 (552)
Q Consensus       412 i~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~---sk~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~  488 (552)
                      +..+|..++.||+|+||.|+.|.++.+++.||||.|.+   .....++..||+++|+.++|      +|||.+++.+...
T Consensus        20 i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~H------eNIi~l~di~~p~   93 (359)
T KOG0660|consen   20 IPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRH------ENIIGLLDIFRPP   93 (359)
T ss_pred             ccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcC------CCcceEEeecccc
Confidence            44677778999999999999999999999999999874   34456789999999999998      9999999999862


Q ss_pred             -----CEEEEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          489 -----EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       489 -----~hLyIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                           +.+|||+|+|+.+|.++|+..+.      |++..++.++.||+.||.|+|+.+|||+|||+
T Consensus        94 ~~~~f~DvYiV~elMetDL~~iik~~~~------L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKP  153 (359)
T KOG0660|consen   94 SRDKFNDVYLVFELMETDLHQIIKSQQD------LTDDHAQYFLYQILRGLKYIHSANVIHRDLKP  153 (359)
T ss_pred             cccccceeEEehhHHhhHHHHHHHcCcc------ccHHHHHHHHHHHHHhcchhhcccccccccch
Confidence                 56999999999999999998765      89999999999999999999999999999996

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=99.75  E-value=1.3e-17  Score=164.25  Aligned_cols=128  Identities=21%  Similarity=0.251  Sum_probs=107.7

Q ss_pred             ceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecCh---hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEe----
Q 008813          415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH----  487 (552)
Q Consensus       415 RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk---~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~----  487 (552)
                      ||++++.||+|+||.||+|+++.+++.||||+++...   .......+|+.+++.+.+   .+|+||+++++++..    
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~---~~h~ni~~~~~~~~~~~~~   77 (288)
T cd07863           1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEA---FDHPNIVRLMDVCATSRTD   77 (288)
T ss_pred             CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhh---cCCCCeeeeeeeeccccCC
Confidence            6999999999999999999999999999999987531   122456688888888752   112999999999864    


Q ss_pred             -CCEEEEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          488 -LEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       488 -~~hLyIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                       ..++++|||++.++|.+++.......    +++..++.++.||+.||.|||++||||+|||+
T Consensus        78 ~~~~~~lv~e~~~~~l~~~~~~~~~~~----~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp  136 (288)
T cd07863          78 RETKVTLVFEHVDQDLRTYLDKVPPPG----LPAETIKDLMRQFLRGLDFLHANCIVHRDLKP  136 (288)
T ss_pred             CCceEEEEEcccccCHHHHHHhcCCCC----CCHHHHHHHHHHHHHHHHHHHhCCeecCCCCH
Confidence             35689999999999999988654333    89999999999999999999999999999986

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.75  E-value=2.7e-18  Score=189.38  Aligned_cols=126  Identities=22%  Similarity=0.330  Sum_probs=112.0

Q ss_pred             eecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC----hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEE
Q 008813          411 VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND----KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFY  486 (552)
Q Consensus       411 vi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s----k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~  486 (552)
                      .-.+.|.++++||+|+||+|+++..+.+++.+|||++++.    .+-++....|.+|+...+.|     |.+++|+.+|+
T Consensus       365 ~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~H-----PFL~~L~~~fQ  439 (694)
T KOG0694|consen  365 LTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRH-----PFLVNLFSCFQ  439 (694)
T ss_pred             ccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccC-----CeEeecccccc
Confidence            3446799999999999999999999999999999999985    44567889999999999855     99999999999


Q ss_pred             eCCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecc
Q 008813          487 HLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILF  548 (552)
Q Consensus       487 ~~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~  548 (552)
                      +++|+|+||||+.| ++..+++...       |++..++.|+..|+.||+|||++||||+|||
T Consensus       440 T~~~l~fvmey~~Ggdm~~~~~~~~-------F~e~rarfyaAev~l~L~fLH~~~IIYRDlK  495 (694)
T KOG0694|consen  440 TKEHLFFVMEYVAGGDLMHHIHTDV-------FSEPRARFYAAEVVLGLQFLHENGIIYRDLK  495 (694)
T ss_pred             cCCeEEEEEEecCCCcEEEEEeccc-------ccHHHHHHHHHHHHHHHHHHHhcCceeeecc
Confidence            99999999999887 7444433322       9999999999999999999999999999998

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.75  E-value=1.1e-17  Score=170.62  Aligned_cols=119  Identities=18%  Similarity=0.211  Sum_probs=105.4

Q ss_pred             EEeccCCceEEEEEEECCCCcEEEEEEEecC----hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEEEEEE
Q 008813          420 EYLGSAAFSKVFQAQDLHTGVDVCLKIIKND----KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVC  495 (552)
Q Consensus       420 e~LGkG~FG~VykA~Dkktg~~VAVKIIk~s----k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hLyIVm  495 (552)
                      +.||+|+||.||+|.+..+++.||||++++.    ......+.+|+.+++.+.+|     |||++++++|...+++||||
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~h-----p~Iv~~~~~~~~~~~~~lv~   75 (329)
T cd05588           1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNH-----PFLVGLHSCFQTESRLFFVI   75 (329)
T ss_pred             CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCC-----CCCCceEEEEEcCCEEEEEE
Confidence            3689999999999999999999999999863    22345678899999998544     99999999999999999999


Q ss_pred             ecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          496 ELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       496 Ell~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ||+.+ +|..++...+.      +++..++.|+.||+.||.|||++||+|+|||+
T Consensus        76 e~~~~g~L~~~~~~~~~------l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp  124 (329)
T cd05588          76 EFVSGGDLMFHMQRQRK------LPEEHARFYSAEISLALNFLHERGIIYRDLKL  124 (329)
T ss_pred             eCCCCCCHHHHHHHcCC------CCHHHHHHHHHHHHHHHHHHHHCCeEecCCCH
Confidence            99987 99988876543      89999999999999999999999999999986

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.75  E-value=1.6e-17  Score=164.06  Aligned_cols=125  Identities=22%  Similarity=0.199  Sum_probs=112.0

Q ss_pred             CceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecCh--hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEE
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL  491 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk--~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hL  491 (552)
                      ++|++.+.||+|+||.||+|.++.+++.||||.+....  .....+.+|+.+++.++|      +||+++++++...++.
T Consensus         5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h------~~i~~~~~~~~~~~~~   78 (291)
T cd07844           5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKH------ANIVTLHDIIHTKKTL   78 (291)
T ss_pred             cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCC------cceeeEEEEEecCCeE
Confidence            67999999999999999999999899999999987542  123456789999999998      9999999999999999


Q ss_pred             EEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          492 FIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       492 yIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      |+||||+.++|.+++.....     ++++..++.++.||+.||.|||+++|+|++|++
T Consensus        79 ~lv~e~~~~~L~~~~~~~~~-----~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p  131 (291)
T cd07844          79 TLVFEYLDTDLKQYMDDCGG-----GLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKP  131 (291)
T ss_pred             EEEEecCCCCHHHHHHhCCC-----CCCHHHHHHHHHHHHHHHHHHHhCCeecccCCH
Confidence            99999999999998876543     289999999999999999999999999999986

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.75  E-value=6.7e-19  Score=175.21  Aligned_cols=126  Identities=22%  Similarity=0.274  Sum_probs=114.2

Q ss_pred             CceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChh----hHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCC
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD----FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE  489 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~----~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~  489 (552)
                      ++|.+.+.||+|.||.||+|+.++++-.||||++.++.-    ...++.+|++|...|+|      |||+++|++|.+..
T Consensus        22 ~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~h------pnilrlY~~fhd~~   95 (281)
T KOG0580|consen   22 DDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRH------PNILRLYGYFHDSK   95 (281)
T ss_pred             hhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCC------ccHHhhhhheeccc
Confidence            579999999999999999999999999999999987532    33578899999999999      99999999999999


Q ss_pred             EEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          490 HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       490 hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      .+||++||... +|+..|+..+...    |++..+..|+.|++.||.|+|.++|||+|+|+
T Consensus        96 riyLilEya~~gel~k~L~~~~~~~----f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKp  152 (281)
T KOG0580|consen   96 RIYLILEYAPRGELYKDLQEGRMKR----FDEQRAATYIKQLANALLYCHLKRVIHRDIKP  152 (281)
T ss_pred             eeEEEEEecCCchHHHHHHhccccc----ccccchhHHHHHHHHHHHHhccCCcccCCCCH
Confidence            99999999765 9999999554433    99999999999999999999999999999986

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.75  E-value=1.4e-17  Score=169.23  Aligned_cols=119  Identities=23%  Similarity=0.270  Sum_probs=105.3

Q ss_pred             EEeccCCceEEEEEEECCCCcEEEEEEEecC----hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEEEEEE
Q 008813          420 EYLGSAAFSKVFQAQDLHTGVDVCLKIIKND----KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVC  495 (552)
Q Consensus       420 e~LGkG~FG~VykA~Dkktg~~VAVKIIk~s----k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hLyIVm  495 (552)
                      +.||+|+||.||+|.+..+++.||+|+++..    ........+|+++++.++|      +||++++++|...+++||||
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~h------p~i~~~~~~~~~~~~~~lv~   74 (325)
T cd05594           1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH------PFLTALKYSFQTHDRLCFVM   74 (325)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCC------CCCCceEEEEEcCCEEEEEE
Confidence            3689999999999999999999999999863    2233566789999999998      99999999999999999999


Q ss_pred             ecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHh-CCCeeeecccc
Q 008813          496 ELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFL-LLVIYFILFCF  550 (552)
Q Consensus       496 Ell~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs-~gIIH~~L~~~  550 (552)
                      ||+.+ +|..++...+.      +++..++.|+.||+.||.|||+ +||||+|||+-
T Consensus        75 E~~~~~~L~~~l~~~~~------l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~  125 (325)
T cd05594          75 EYANGGELFFHLSRERV------FSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLE  125 (325)
T ss_pred             eCCCCCcHHHHHHhcCC------CCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCC
Confidence            99987 89888876543      8999999999999999999997 89999999973

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]

Probab=99.75  E-value=2e-18  Score=185.60  Aligned_cols=146  Identities=30%  Similarity=0.430  Sum_probs=139.0

Q ss_pred             CCCcceeeCceecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChhhHHHHHHHHHHHHHhcccCCCCCCCeeE
Q 008813          401 NKDLPIILNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILR  480 (552)
Q Consensus       401 ~~~y~v~~gdvi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd~~d~pnIVr  480 (552)
                      .++|.+.+|.++..||.|....|+|-|+.|..|.|...+..||||||+++..+.+.-++|+.||++|+..|+.+..|+++
T Consensus       419 EGYYrv~igE~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M~KtGl~EleiLkKL~~AD~Edk~Hclr  498 (752)
T KOG0670|consen  419 EGYYRVRIGELLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVMHKTGLKELEILKKLNDADPEDKFHCLR  498 (752)
T ss_pred             cceEEEehhhhhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchHHhhhhhHHHHHHHHhhccCchhhhHHHH
Confidence            56899999999999999999999999999999999999999999999999888889999999999999999999999999


Q ss_pred             eEeEEEeCCEEEEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          481 LYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       481 L~d~F~~~~hLyIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      |+..|.+.+|+|||+|-+.-+|.++|+..+...|   |....++.|+.|+..||..|...||+|-|||+
T Consensus       499 l~r~F~hknHLClVFE~LslNLRevLKKyG~nvG---L~ikaVRsYaqQLflALklLK~c~vlHaDIKP  564 (752)
T KOG0670|consen  499 LFRHFKHKNHLCLVFEPLSLNLREVLKKYGRNVG---LHIKAVRSYAQQLFLALKLLKKCGVLHADIKP  564 (752)
T ss_pred             HHHHhhhcceeEEEehhhhchHHHHHHHhCcccc---eeehHHHHHHHHHHHHHHHHHhcCeeecccCc
Confidence            9999999999999999999999999998765433   99999999999999999999999999999986

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.75  E-value=2.7e-17  Score=163.58  Aligned_cols=125  Identities=19%  Similarity=0.162  Sum_probs=109.9

Q ss_pred             ceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecCh----hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCE
Q 008813          415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH  490 (552)
Q Consensus       415 RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk----~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~h  490 (552)
                      .|++.+.||+|+||+||++.+..+++.||+|++....    .....+.+|+.+|+.++|      +||+.+++++...+.
T Consensus         1 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~------~~i~~~~~~~~~~~~   74 (285)
T cd05632           1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNS------QFVVNLAYAYETKDA   74 (285)
T ss_pred             CceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCC------cCceeEEEEEecCCE
Confidence            3778899999999999999999999999999997542    223456789999999998      999999999999999


Q ss_pred             EEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          491 LFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       491 LyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      +|+||||+.+ +|..++.......    +++..+..++.||+.||.|||+++|||++|++
T Consensus        75 ~~lv~e~~~~~~L~~~~~~~~~~~----~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp  130 (285)
T cd05632          75 LCLVLTIMNGGDLKFHIYNMGNPG----FEEERALFYAAEILCGLEDLHRENTVYRDLKP  130 (285)
T ss_pred             EEEEEEeccCccHHHHHHHhcCCC----CCHHHHHHHHHHHHHHHHHHHhCCeeecCCCH
Confidence            9999999987 8988887544322    89999999999999999999999999999986

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>PHA03207 serine/threonine kinase US3; Provisional

Probab=99.75  E-value=2.6e-17  Score=172.61  Aligned_cols=126  Identities=17%  Similarity=0.193  Sum_probs=110.5

Q ss_pred             eCceecCceEEEEEeccCCceEEEEEEEC--CCCcEEEEEEEecChhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEE
Q 008813          408 LNTVIAGRYYVTEYLGSAAFSKVFQAQDL--HTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYF  485 (552)
Q Consensus       408 ~gdvi~~RY~Ile~LGkG~FG~VykA~Dk--ktg~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F  485 (552)
                      ...++..+|++++.||+|+||.||+|...  .+++.||||++....    ...+|+++|+.|+|      +|||+++++|
T Consensus        86 ~~~~~~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~~----~~~~E~~il~~l~h------~~iv~~~~~~  155 (392)
T PHA03207         86 PASVVRMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGGK----TPGREIDILKTISH------RAIINLIHAY  155 (392)
T ss_pred             cchhccCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEeccccc----cHHHHHHHHHhcCC------CCccceeeeE
Confidence            34456678999999999999999999764  356789999987542    34689999999998      9999999999


Q ss_pred             EeCCEEEEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          486 YHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       486 ~~~~hLyIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ....++|+|||++.++|.+++.....      +++..++.|+.||+.||.|||++||||+|||+
T Consensus       156 ~~~~~~~lv~e~~~~~l~~~l~~~~~------l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp  213 (392)
T PHA03207        156 RWKSTVCMVMPKYKCDLFTYVDRSGP------LPLEQAITIQRRLLEALAYLHGRGIIHRDVKT  213 (392)
T ss_pred             eeCCEEEEEehhcCCCHHHHHHhcCC------CCHHHHHHHHHHHHHHHHHHHHCCccccCCCH
Confidence            99999999999999999999854432      89999999999999999999999999999986

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.75  E-value=1.9e-17  Score=161.32  Aligned_cols=125  Identities=21%  Similarity=0.253  Sum_probs=112.1

Q ss_pred             cCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecCh-hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEE
Q 008813          413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK-DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL  491 (552)
Q Consensus       413 ~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk-~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hL  491 (552)
                      ..+|++++.||+|+||.||+|.+..+++.||+|++.... .....+.+|+.+++.++|      +||+++++++...+.+
T Consensus         8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h------~~ii~~~~~~~~~~~~   81 (267)
T cd06646           8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKH------CNIVAYFGSYLSREKL   81 (267)
T ss_pred             hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCC------CCeeeeeEEEEeCCEE
Confidence            457999999999999999999999999999999997542 234567889999999998      9999999999999999


Q ss_pred             EEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          492 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       492 yIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      |+||||+.+ +|.+++.....      +++..+..++.|++.||.|||+++|+|++|++
T Consensus        82 ~iv~e~~~~~~L~~~~~~~~~------~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p  134 (267)
T cd06646          82 WICMEYCGGGSLQDIYHVTGP------LSELQIAYVCRETLQGLAYLHSKGKMHRDIKG  134 (267)
T ss_pred             EEEEeCCCCCcHHHHHHhcCC------CCHHHHHHHHHHHHHHHHHHHHCCccccCCCH
Confidence            999999987 89998875432      89999999999999999999999999999986

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.75  E-value=1.4e-17  Score=168.91  Aligned_cols=119  Identities=26%  Similarity=0.296  Sum_probs=104.5

Q ss_pred             EEeccCCceEEEEEEECCCCcEEEEEEEecC----hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEEEEEE
Q 008813          420 EYLGSAAFSKVFQAQDLHTGVDVCLKIIKND----KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVC  495 (552)
Q Consensus       420 e~LGkG~FG~VykA~Dkktg~~VAVKIIk~s----k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hLyIVm  495 (552)
                      +.||+|+||.||+|++..+++.||||+++..    .........|+++++.+.+|     |||++++++|...+++||||
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h-----p~i~~~~~~~~~~~~~~lv~   75 (321)
T cd05591           1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKH-----PFLTALHCCFQTKDRLFFVM   75 (321)
T ss_pred             CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCC-----CCccceeeEEEcCCeEEEEE
Confidence            3689999999999999999999999999864    22335567899999877544     99999999999999999999


Q ss_pred             ecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          496 ELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       496 Ell~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ||+.+ +|..++.....      +++..++.++.||+.||.|||++||||+|||+
T Consensus        76 E~~~~~~L~~~l~~~~~------~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp  124 (321)
T cd05591          76 EYVNGGDLMFQIQRSRK------FDEPRSRFYAAEVTLALMFLHRHGVIYRDLKL  124 (321)
T ss_pred             eCCCCCcHHHHHHHcCC------CCHHHHHHHHHHHHHHHHHHHHCCeeccCCCH
Confidence            99987 99988876543      89999999999999999999999999999986

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>PTZ00036 glycogen synthase kinase; Provisional

Probab=99.75  E-value=1.7e-17  Score=177.66  Aligned_cols=127  Identities=21%  Similarity=0.261  Sum_probs=108.0

Q ss_pred             ecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeC---
Q 008813          412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL---  488 (552)
Q Consensus       412 i~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~---  488 (552)
                      ...+|.+++.||+|+||.||+|.+..+++.||||++.....   ...+|+.+|+.++|      +|||+++++|...   
T Consensus        64 ~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~---~~~~Ei~il~~l~h------~niv~l~~~~~~~~~~  134 (440)
T PTZ00036         64 PNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDPQ---YKNRELLIMKNLNH------INIIFLKDYYYTECFK  134 (440)
T ss_pred             cCCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCcc---hHHHHHHHHHhcCC------CCCcceeeeEeecccc
Confidence            34689999999999999999999999999999998865432   34579999999998      9999999987543   


Q ss_pred             -----CEEEEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          489 -----EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       489 -----~hLyIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                           .++++||||++++|.+++.......  ..+++..++.|+.||+.||.|||+++|||+|||+
T Consensus       135 ~~~~~~~l~lvmE~~~~~l~~~~~~~~~~~--~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp  198 (440)
T PTZ00036        135 KNEKNIFLNVVMEFIPQTVHKYMKHYARNN--HALPLFLVKLYSYQLCRALAYIHSKFICHRDLKP  198 (440)
T ss_pred             cCCCceEEEEEEecCCccHHHHHHHHhhcC--CCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCH
Confidence                 2588999999999988887532211  2389999999999999999999999999999996

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.75  E-value=1.9e-17  Score=169.53  Aligned_cols=126  Identities=17%  Similarity=0.150  Sum_probs=113.2

Q ss_pred             ecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC--hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCC
Q 008813          412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE  489 (552)
Q Consensus       412 i~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s--k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~  489 (552)
                      ..++|++.++||+|+||.||++.+..++..+|+|+++..  ......+.+|+++|+.++|      +||++++++|...+
T Consensus         3 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h------~~iv~~~~~~~~~~   76 (333)
T cd06650           3 KDDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNS------PYIVGFYGAFYSDG   76 (333)
T ss_pred             chhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCC------CcccceeEEEEECC
Confidence            347899999999999999999999999999999998764  2344678899999999998      99999999999999


Q ss_pred             EEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhC-CCeeeeccc
Q 008813          490 HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLL-LVIYFILFC  549 (552)
Q Consensus       490 hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~-gIIH~~L~~  549 (552)
                      ++||||||+.+ +|.++++....      +++..++.++.||+.||.|||++ +|||++||+
T Consensus        77 ~~~lv~e~~~~~~L~~~l~~~~~------~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp  132 (333)
T cd06650          77 EISICMEHMDGGSLDQVLKKAGR------IPEQILGKVSIAVIKGLTYLREKHKIMHRDVKP  132 (333)
T ss_pred             EEEEEEecCCCCcHHHHHHHcCC------CCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCh
Confidence            99999999976 99999986543      88999999999999999999975 799999996

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.75  E-value=2.8e-17  Score=163.71  Aligned_cols=125  Identities=21%  Similarity=0.198  Sum_probs=110.0

Q ss_pred             ceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecCh----hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCE
Q 008813          415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH  490 (552)
Q Consensus       415 RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk----~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~h  490 (552)
                      .|++.+.||+|+||.||+|.+..+++.||||.+....    .....+.+|+.+++.++|      ++|+.+++.+...++
T Consensus         1 ~f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~------~~i~~~~~~~~~~~~   74 (285)
T cd05630           1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNS------RFVVSLAYAYETKDA   74 (285)
T ss_pred             CceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCC------CCeeeeeEEEecCCE
Confidence            3788899999999999999999999999999987532    223456789999999998      999999999999999


Q ss_pred             EEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          491 LFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       491 LyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      +|+||||+.+ +|.+++.......    +++..++.++.|++.||.|||+++|+|++|++
T Consensus        75 ~~lv~e~~~g~~L~~~l~~~~~~~----l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp  130 (285)
T cd05630          75 LCLVLTLMNGGDLKFHIYHMGEAG----FEEGRAVFYAAEICCGLEDLHQERIVYRDLKP  130 (285)
T ss_pred             EEEEEEecCCCcHHHHHHHhcccC----CCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCH
Confidence            9999999976 9999887654322    89999999999999999999999999999986

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.75  E-value=9.2e-18  Score=164.96  Aligned_cols=124  Identities=25%  Similarity=0.246  Sum_probs=111.2

Q ss_pred             ceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC---hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEE
Q 008813          415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL  491 (552)
Q Consensus       415 RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s---k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hL  491 (552)
                      ||++++.||+|+||.||+|.+..+++.||+|+++..   ......+.+|+.+++.++|      +||+++++++....++
T Consensus         1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h------~~i~~~~~~~~~~~~~   74 (284)
T cd07839           1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKH------KNIVRLYDVLHSDKKL   74 (284)
T ss_pred             CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCC------CCeeeHHHHhccCCce
Confidence            699999999999999999999999999999999753   2223467789999999998      9999999999999999


Q ss_pred             EEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          492 FIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       492 yIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      |+||||+.++|.+++.....     ++++..++.++.||+.||.|||+++|+|++|++
T Consensus        75 ~lv~e~~~~~l~~~~~~~~~-----~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~  127 (284)
T cd07839          75 TLVFEYCDQDLKKYFDSCNG-----DIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKP  127 (284)
T ss_pred             EEEEecCCCCHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCH
Confidence            99999999999998876432     289999999999999999999999999999986

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.74  E-value=2.1e-17  Score=168.51  Aligned_cols=119  Identities=16%  Similarity=0.209  Sum_probs=105.9

Q ss_pred             EEeccCCceEEEEEEECCCCcEEEEEEEecCh----hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEEEEEE
Q 008813          420 EYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVC  495 (552)
Q Consensus       420 e~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk----~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hLyIVm  495 (552)
                      +.||+|+||+||+|++..+++.||||+++...    ...+.+.+|+.++..+.+|     ++|+++++++...+++||||
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~-----~~i~~~~~~~~~~~~~~lv~   75 (327)
T cd05617           1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSN-----PFLVGLHSCFQTTSRLFLVI   75 (327)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCC-----CCEeeEEEEEEeCCEEEEEE
Confidence            36999999999999999999999999998642    2345678999999998755     99999999999999999999


Q ss_pred             ecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          496 ELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       496 Ell~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ||+.+ +|..++...+.      +++..++.|+.||+.||.|||++||+|+|||+
T Consensus        76 e~~~~~~L~~~~~~~~~------l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp  124 (327)
T cd05617          76 EYVNGGDLMFHMQRQRK------LPEEHARFYAAEICIALNFLHERGIIYRDLKL  124 (327)
T ss_pred             eCCCCCcHHHHHHHcCC------CCHHHHHHHHHHHHHHHHHHHHCCeeccCCCH
Confidence            99977 99988876543      89999999999999999999999999999996

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.74  E-value=1.7e-17  Score=167.84  Aligned_cols=118  Identities=24%  Similarity=0.274  Sum_probs=103.8

Q ss_pred             EEeccCCceEEEEEEEC---CCCcEEEEEEEecCh---hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEEEE
Q 008813          420 EYLGSAAFSKVFQAQDL---HTGVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFI  493 (552)
Q Consensus       420 e~LGkG~FG~VykA~Dk---ktg~~VAVKIIk~sk---~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hLyI  493 (552)
                      +.||+|+||.||++++.   .+++.||||+++...   .......+|+++|++++|      +||+++++++...+++||
T Consensus         2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h------~niv~~~~~~~~~~~~~l   75 (318)
T cd05582           2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNH------PFIVKLHYAFQTEGKLYL   75 (318)
T ss_pred             ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCC------CCcccEEEEEEcCCEEEE
Confidence            57999999999999863   578999999998642   123456789999999998      999999999999999999


Q ss_pred             EEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          494 VCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       494 VmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ||||+.+ +|.+++.....      +++..++.|+.||+.||.|||++||+|+|||+
T Consensus        76 v~e~~~~~~L~~~l~~~~~------l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp  126 (318)
T cd05582          76 ILDFLRGGDLFTRLSKEVM------FTEEDVKFYLAELALALDHLHSLGIIYRDLKP  126 (318)
T ss_pred             EEcCCCCCcHHHHHHHcCC------CCHHHHHHHHHHHHHHHHHHHHCCEecCCCCH
Confidence            9999976 99999876542      89999999999999999999999999999986

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.74  E-value=1.8e-17  Score=168.20  Aligned_cols=119  Identities=25%  Similarity=0.289  Sum_probs=103.0

Q ss_pred             EEeccCCceEEEEEEECCCCcEEEEEEEecCh----hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEEEEEE
Q 008813          420 EYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVC  495 (552)
Q Consensus       420 e~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk----~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hLyIVm  495 (552)
                      +.||+|+||.||+|.+..+++.||||+++...    ...+....|..++..+.+|     |||+++++++...+++||||
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h-----p~i~~~~~~~~~~~~~~lv~   75 (316)
T cd05592           1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEH-----PFLTHLFCTFQTKEHLFFVM   75 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCC-----CCccceeeEEEcCCEEEEEE
Confidence            36999999999999999999999999998642    2234556778887765443     99999999999999999999


Q ss_pred             ecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          496 ELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       496 Ell~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ||+.+ +|..+++....      +++..++.|+.||+.||.|||+++|||+|||+
T Consensus        76 e~~~gg~L~~~~~~~~~------~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp  124 (316)
T cd05592          76 EYLNGGDLMFHIQSSGR------FDEARARFYAAEIICGLQFLHKKGIIYRDLKL  124 (316)
T ss_pred             cCCCCCcHHHHHHHcCC------CCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCH
Confidence            99976 99998876543      89999999999999999999999999999986

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.74  E-value=1.7e-17  Score=168.50  Aligned_cols=123  Identities=15%  Similarity=0.115  Sum_probs=108.7

Q ss_pred             EEEEeccC--CceEEEEEEECCCCcEEEEEEEecC---hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEEE
Q 008813          418 VTEYLGSA--AFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLF  492 (552)
Q Consensus       418 Ile~LGkG--~FG~VykA~Dkktg~~VAVKIIk~s---k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hLy  492 (552)
                      ++++||+|  +|+.||++.++.+++.||||+++..   ......+.+|+.+++.++|      |||++++++|...+.+|
T Consensus         2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h------pniv~~~~~~~~~~~~~   75 (327)
T cd08227           2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNH------PNIVPYRATFIADNELW   75 (327)
T ss_pred             hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCC------CCeeeEEEEEEECCEEE
Confidence            46789999  7899999999999999999999754   2344567789999999998      99999999999999999


Q ss_pred             EEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          493 IVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       493 IVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      +||||+.+ +|.+++..+...+    +++..++.|+.||+.||.|||+++|||+|||+-
T Consensus        76 lv~e~~~~~~l~~~~~~~~~~~----l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~  130 (327)
T cd08227          76 VVTSFMAYGSAKDLICTHFMDG----MSELAIAYILQGVLKALDYIHHMGYVHRSVKAS  130 (327)
T ss_pred             EEEeccCCCcHHHHHHhhccCC----CCHHHHHHHHHHHHHHHHHHHHCCEecCCCChh
Confidence            99999986 9999997654333    899999999999999999999999999999974

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.74  E-value=1.9e-17  Score=168.05  Aligned_cols=119  Identities=28%  Similarity=0.318  Sum_probs=103.8

Q ss_pred             EEeccCCceEEEEEEECCCCcEEEEEEEecCh----hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEEEEEE
Q 008813          420 EYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVC  495 (552)
Q Consensus       420 e~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk----~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hLyIVm  495 (552)
                      +.||+|+||.||+|+++.+++.||||+++...    ........|+.++..+.+|     +||++++++|...+++||||
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~-----~~i~~~~~~~~~~~~~~lv~   75 (316)
T cd05620           1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWEN-----PFLTHLYCTFQTKEHLFFVM   75 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCC-----CCccCeeEEEEeCCEEEEEE
Confidence            46999999999999999999999999998642    2234567788888776433     99999999999999999999


Q ss_pred             ecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          496 ELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       496 Ell~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ||+.+ +|..++..+..      +++..++.++.||+.||.|||++||||+|||+
T Consensus        76 E~~~~g~L~~~i~~~~~------~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp  124 (316)
T cd05620          76 EFLNGGDLMFHIQDKGR------FDLYRATFYAAEIVCGLQFLHSKGIIYRDLKL  124 (316)
T ss_pred             CCCCCCcHHHHHHHcCC------CCHHHHHHHHHHHHHHHHHHHHCCeEecCCCH
Confidence            99987 99998876543      89999999999999999999999999999996

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.74  E-value=3.8e-17  Score=160.37  Aligned_cols=126  Identities=20%  Similarity=0.283  Sum_probs=111.3

Q ss_pred             ceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC---hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEE
Q 008813          415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL  491 (552)
Q Consensus       415 RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s---k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hL  491 (552)
                      .|++++.||+|+||.||+|.+..+++.||||+++..   ......+.+|+.+++.++|      +||+++++++..++++
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h------~~i~~~~~~~~~~~~~   74 (285)
T cd07861           1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQH------PNIVCLQDVLMQESRL   74 (285)
T ss_pred             CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCC------CCEeeeEEEEeeCCeE
Confidence            388999999999999999999999999999998753   2234567899999999998      9999999999999999


Q ss_pred             EEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          492 FIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       492 yIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      |+||||+.++|.+++......   ..+++..++.++.||+.||.|||+++|+|++|++
T Consensus        75 ~~v~e~~~~~l~~~~~~~~~~---~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p  129 (285)
T cd07861          75 YLIFEFLSMDLKKYLDSLPKG---QYMDAELVKSYLYQILQGILFCHSRRVLHRDLKP  129 (285)
T ss_pred             EEEEecCCCCHHHHHhcCCCC---CcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCH
Confidence            999999999999988754321   1389999999999999999999999999999986

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.74  E-value=1.7e-17  Score=168.76  Aligned_cols=119  Identities=24%  Similarity=0.348  Sum_probs=104.7

Q ss_pred             EEeccCCceEEEEEEECCCCcEEEEEEEecCh----hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEEEEEE
Q 008813          420 EYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVC  495 (552)
Q Consensus       420 e~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk----~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hLyIVm  495 (552)
                      +.||+|+||.||+|+++.+++.||||+++...    ........|+.+++.+.+|     |||++++++|...+++||||
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h-----~~iv~~~~~~~~~~~~~iv~   75 (320)
T cd05590           1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNH-----PFLTQLYCCFQTPDRLFFVM   75 (320)
T ss_pred             CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCC-----CchhceeeEEEcCCEEEEEE
Confidence            36899999999999999999999999997532    2345667888998887544     99999999999999999999


Q ss_pred             ecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          496 ELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       496 Ell~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ||+.+ +|..++.....      +++..++.++.||+.||.|||+++|||+|||+
T Consensus        76 Ey~~~g~L~~~i~~~~~------l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp  124 (320)
T cd05590          76 EFVNGGDLMFHIQKSRR------FDEARARFYAAEITSALMFLHDKGIIYRDLKL  124 (320)
T ss_pred             cCCCCchHHHHHHHcCC------CCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCH
Confidence            99987 99998876543      89999999999999999999999999999996

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.74  E-value=5.2e-17  Score=157.21  Aligned_cols=126  Identities=18%  Similarity=0.199  Sum_probs=112.1

Q ss_pred             ceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC--hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEEE
Q 008813          415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLF  492 (552)
Q Consensus       415 RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s--k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hLy  492 (552)
                      +|++.+.||+|+||.||++++..+++.+|+|.++..  ....+.+.+|+.+++.++|      +||+++++.+...+++|
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h------~~i~~~~~~~~~~~~~~   74 (255)
T cd08219           1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKH------PNIVAFKESFEADGHLY   74 (255)
T ss_pred             CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCC------CCcceEEEEEEECCEEE
Confidence            588999999999999999999999999999998653  3344677899999999998      99999999999999999


Q ss_pred             EEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          493 IVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       493 IVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      +||||+.+ +|.+++......    .+++..++.++.||+.||.|||++||+|.+|++-
T Consensus        75 lv~e~~~~~~l~~~~~~~~~~----~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~  129 (255)
T cd08219          75 IVMEYCDGGDLMQKIKLQRGK----LFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSK  129 (255)
T ss_pred             EEEeeCCCCcHHHHHHhccCC----CCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcc
Confidence            99999986 999988764432    2899999999999999999999999999999863

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=99.74  E-value=1e-17  Score=173.55  Aligned_cols=122  Identities=19%  Similarity=0.212  Sum_probs=109.4

Q ss_pred             eEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC---hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCC---
Q 008813          416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE---  489 (552)
Q Consensus       416 Y~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s---k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~---  489 (552)
                      |++.+.||+|+||.||+|.+..+++.||||++...   ....+.+.+|+++|+.++|      +||+++++++...+   
T Consensus         2 ~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h------~niv~~~~~~~~~~~~~   75 (372)
T cd07853           2 VEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKH------DNVLSALDILQPPHIDP   75 (372)
T ss_pred             CcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCC------CCcCCHhheecCCCccc
Confidence            67889999999999999999999999999998653   2234578899999999998      99999999998776   


Q ss_pred             --EEEEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          490 --HLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       490 --hLyIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                        ++|+||||+.++|.+++.....      +++..++.|+.||+.||.|||++||||+|||+
T Consensus        76 ~~~~~lv~e~~~~~l~~~~~~~~~------l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp  131 (372)
T cd07853          76 FEEIYVVTELMQSDLHKIIVSPQP------LSSDHVKVFLYQILRGLKYLHSAGILHRDIKP  131 (372)
T ss_pred             cceEEEEeeccccCHHHHHhcCCC------CCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCh
Confidence              8999999999999998876543      89999999999999999999999999999996

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.74  E-value=3.6e-17  Score=162.52  Aligned_cols=124  Identities=19%  Similarity=0.328  Sum_probs=112.1

Q ss_pred             CceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecCh----hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCC
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE  489 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk----~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~  489 (552)
                      .+|++.+.||+|+||.||++.+..+++.||||+++...    ...+.+.+|+++++++.|      +||+++++++...+
T Consensus         1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h------~~i~~~~~~~~~~~   74 (290)
T cd05580           1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRH------PFLVNLYGSFQDDS   74 (290)
T ss_pred             CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCC------CCccceeeEEEcCC
Confidence            36999999999999999999999999999999997532    234678899999999998      99999999999999


Q ss_pred             EEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          490 HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       490 hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      .+|+||||+.+ +|.++++....      +++..++.++.||+.||.|||++||+|.+|++
T Consensus        75 ~~~~v~e~~~~~~L~~~~~~~~~------l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p  129 (290)
T cd05580          75 NLYLVMEYVPGGELFSHLRKSGR------FPEPVARFYAAQVVLALEYLHSLDIVYRDLKP  129 (290)
T ss_pred             eEEEEEecCCCCCHHHHHHHcCC------CCHHHHHHHHHHHHHHHHHHHHCCEecCCCCH
Confidence            99999999955 99999987643      89999999999999999999999999999986

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.74  E-value=2e-17  Score=160.56  Aligned_cols=123  Identities=20%  Similarity=0.259  Sum_probs=110.9

Q ss_pred             ceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecCh-------hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEe
Q 008813          415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK-------DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH  487 (552)
Q Consensus       415 RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk-------~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~  487 (552)
                      +|+..+.||+|+||.||++.+..+++.||||++....       ...+.+.+|+++|++++|      +||+++++++..
T Consensus         1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h------~~iv~~~~~~~~   74 (268)
T cd06630           1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNH------PHIIRMLGATCE   74 (268)
T ss_pred             CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCC------Cceehhhceecc
Confidence            4778899999999999999999999999999997532       234678899999999998      999999999999


Q ss_pred             CCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          488 LEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       488 ~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      .+++++||||+.+ +|.++++....      +++..++.++.||+.||.|||++||+|++|++
T Consensus        75 ~~~~~~v~e~~~~~~L~~~l~~~~~------~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~  131 (268)
T cd06630          75 DSHFNLFVEWMAGGSVSHLLSKYGA------FKEAVIINYTEQLLRGLSYLHENQIIHRDVKG  131 (268)
T ss_pred             CCeEEEEEeccCCCcHHHHHHHhCC------CCHHHHHHHHHHHHHHHHHHHhCCeecCCCCH
Confidence            9999999999987 99999986542      89999999999999999999999999999986

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.74  E-value=1e-17  Score=173.72  Aligned_cols=125  Identities=17%  Similarity=0.166  Sum_probs=111.3

Q ss_pred             CceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecCh-hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCC--E
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK-DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE--H  490 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk-~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~--h  490 (552)
                      .+|...+.||+|+||.||++.+.++|+.+|||.+.... ...+.+.+|+.+|.+|+|      ||||++++.....+  .
T Consensus        17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~------p~IV~~~G~~~~~~~~~   90 (313)
T KOG0198|consen   17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNH------PNIVQYYGSSSSRENDE   90 (313)
T ss_pred             chhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCC------CCEEeeCCccccccCee
Confidence            45888899999999999999999999999999987641 125668899999999997      99999999866555  6


Q ss_pred             EEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          491 LFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       491 LyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ++|+|||+.+ +|.++++..+. .    |++..++.+++||++||.|||++||||+|||+
T Consensus        91 ~~i~mEy~~~GsL~~~~~~~g~-~----l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~  145 (313)
T KOG0198|consen   91 YNIFMEYAPGGSLSDLIKRYGG-K----LPEPLVRRYTRQILEGLAYLHSKGIVHCDIKP  145 (313)
T ss_pred             eEeeeeccCCCcHHHHHHHcCC-C----CCHHHHHHHHHHHHHHHHHHHhCCEeccCccc
Confidence            9999999987 99999998764 2    99999999999999999999999999999996

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.74  E-value=4.5e-17  Score=158.37  Aligned_cols=128  Identities=21%  Similarity=0.221  Sum_probs=111.7

Q ss_pred             CceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC----hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCC
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND----KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE  489 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s----k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~  489 (552)
                      ++|++.+.||+|+||.||+|.+..+++.||||.++..    ......+.+|+.+++.++|      |||+++++++...+
T Consensus         2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h------~~i~~~~~~~~~~~   75 (267)
T cd08228           2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNH------PNVIKYLDSFIEDN   75 (267)
T ss_pred             cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCC------cceeeeeeeEEECC
Confidence            5799999999999999999999999999999988642    2334567889999999998      99999999999999


Q ss_pred             EEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          490 HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       490 hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ++++||||+.+ +|.+++.......  ..+++..+..++.||+.||.|||+++|+|.+|++
T Consensus        76 ~~~~v~e~~~~~~L~~~~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~  134 (267)
T cd08228          76 ELNIVLELADAGDLSQMIKYFKKQK--RLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKP  134 (267)
T ss_pred             eEEEEEEecCCCcHHHHHHHhhhcc--CCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCH
Confidence            99999999987 9998886533211  2378999999999999999999999999999985

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.74  E-value=2.9e-17  Score=160.31  Aligned_cols=128  Identities=15%  Similarity=0.169  Sum_probs=114.3

Q ss_pred             cCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEEE
Q 008813          413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLF  492 (552)
Q Consensus       413 ~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hLy  492 (552)
                      ...|.+.+.||+|+||.||+|.+..+++.||+|+++........+.+|+++++.++|      +||+++++++...+.++
T Consensus         5 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~e~~~l~~l~h------~~i~~~~~~~~~~~~~~   78 (263)
T cd05052           5 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH------PNLVQLLGVCTREPPFY   78 (263)
T ss_pred             hHHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCchHHHHHHHHHHHHHhCCC------CChhheEEEEcCCCCcE
Confidence            345899999999999999999999999999999998765445678899999999998      99999999999999999


Q ss_pred             EEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          493 IVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       493 IVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      +||||+.+ +|.+++.......    +++..++.++.||+.||.|||+++|+|++|++-
T Consensus        79 lv~e~~~~~~L~~~~~~~~~~~----l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~  133 (263)
T cd05052          79 IITEFMTYGNLLDYLRECNRQE----VNAVVLLYMATQISSAMEYLEKKNFIHRDLAAR  133 (263)
T ss_pred             EEEEeCCCCcHHHHHHhCCCCC----CCHHHHHHHHHHHHHHHHHHHhCCEeecccCcc
Confidence            99999976 9999997654322    889999999999999999999999999999974

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.73  E-value=4.6e-18  Score=181.89  Aligned_cols=127  Identities=21%  Similarity=0.182  Sum_probs=116.1

Q ss_pred             CceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecCh---hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCE
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH  490 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk---~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~h  490 (552)
                      ++|.+++.||+|+||.+++++++..++.+++|.|+..+   ..+..+..|+.+++++.|      ||||.+++.|...+.
T Consensus         4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~h------P~iv~y~ds~~~~~~   77 (426)
T KOG0589|consen    4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLH------PNIVEYKDSFEEDGQ   77 (426)
T ss_pred             chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccC------CCeeeeccchhcCCc
Confidence            57999999999999999999999999999999998652   345678999999999999      999999999999988


Q ss_pred             -EEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          491 -LFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       491 -LyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                       +||||+||+| +|.+.|+..+...    |+++.+..|+.|++.||.|||+++|+|+||||-
T Consensus        78 ~l~Ivm~Y~eGg~l~~~i~~~k~~~----f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~  135 (426)
T KOG0589|consen   78 LLCIVMEYCEGGDLAQLIKEQKGVL----FPEERILKWFVQILLAVNYLHENRVLHRDLKCA  135 (426)
T ss_pred             eEEEEEeecCCCCHHHHHHHHhhcc----ccHHHHHHHHHHHHHHHHHHHhhhhhcccchhh
Confidence             9999999998 9999999776433    999999999999999999999999999999983

>PHA03209 serine/threonine kinase US3; Provisional

Probab=99.73  E-value=1.9e-17  Score=171.40  Aligned_cols=120  Identities=20%  Similarity=0.171  Sum_probs=109.0

Q ss_pred             CceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEEEE
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFI  493 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hLyI  493 (552)
                      .+|++++.||+|+||+||+|.+..+++.||+|+....     ....|+.+|+.++|      +||+++++++...++.|+
T Consensus        66 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~-----~~~~E~~~l~~l~h------~~iv~~~~~~~~~~~~~l  134 (357)
T PHA03209         66 LGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG-----TTLIEAMLLQNVNH------PSVIRMKDTLVSGAITCM  134 (357)
T ss_pred             cCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc-----ccHHHHHHHHhCCC------CCCcChhheEEeCCeeEE
Confidence            4699999999999999999999999999999986543     34579999999998      999999999999999999


Q ss_pred             EEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          494 VCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       494 VmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      |||++.++|.+++.....     ++++..++.|+.||+.||.|||++||||+|||+
T Consensus       135 v~e~~~~~l~~~l~~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp  185 (357)
T PHA03209        135 VLPHYSSDLYTYLTKRSR-----PLPIDQALIIEKQILEGLRYLHAQRIIHRDVKT  185 (357)
T ss_pred             EEEccCCcHHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCH
Confidence            999999999999876543     289999999999999999999999999999996

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.73  E-value=2.2e-17  Score=176.38  Aligned_cols=126  Identities=16%  Similarity=0.162  Sum_probs=107.3

Q ss_pred             eecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChh---------------hHHHHHHHHHHHHHhcccCCCCC
Q 008813          411 VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD---------------FFDQSLDEIKLLKLVNKNDPADE  475 (552)
Q Consensus       411 vi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~---------------~~~~~lrEIkILk~L~hhd~~d~  475 (552)
                      .....|++.+.||+|.||+|.+|++..+++.||||++.+.+.               -.+++.+||.||++|.|      
T Consensus        94 k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H------  167 (576)
T KOG0585|consen   94 KQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHH------  167 (576)
T ss_pred             eehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCC------
Confidence            344679999999999999999999999999999999976421               12578999999999999      


Q ss_pred             CCeeEeEeEEEeC--CEEEEEEecCCC-CHHHHHHhhccCCCCcC-CCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          476 HHILRLYDYFYHL--EHLFIVCELLRA-NLYEFQKFNQESGGEAY-FTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       476 pnIVrL~d~F~~~--~hLyIVmEll~G-sL~d~Lk~~~~~g~~~p-LSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      +|||+|+.+.-+.  +++|||+|||.. .+. +....      .+ |++.+++.|++.++.||+|||.+||||+|+|+
T Consensus       168 ~nVV~LiEvLDDP~s~~~YlVley~s~G~v~-w~p~d------~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKP  238 (576)
T KOG0585|consen  168 PNVVKLIEVLDDPESDKLYLVLEYCSKGEVK-WCPPD------KPELSEQQARKYLRDVVLGLEYLHYQGIIHRDIKP  238 (576)
T ss_pred             cCeeEEEEeecCcccCceEEEEEeccCCccc-cCCCC------cccccHHHHHHHHHHHHHHHHHHHhcCeeccccch
Confidence            9999999998765  689999999986 332 22211      22 89999999999999999999999999999996

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=99.73  E-value=1e-17  Score=170.79  Aligned_cols=126  Identities=23%  Similarity=0.251  Sum_probs=109.7

Q ss_pred             ecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecCh---hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeC
Q 008813          412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL  488 (552)
Q Consensus       412 i~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk---~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~  488 (552)
                      +.+||++++.||+|+||.||+|.+..+++.||||++....   .....+.+|+++|+.++|      +||++++++|...
T Consensus        13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h------~~iv~~~~~~~~~   86 (343)
T cd07878          13 VPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKH------ENVIGLLDVFTPA   86 (343)
T ss_pred             hhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCC------Cchhhhhhhhccc
Confidence            3478999999999999999999999999999999997532   233567789999999998      9999999988643


Q ss_pred             ------CEEEEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          489 ------EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       489 ------~hLyIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                            ..+|++||+++++|.++++...       +++..++.|+.||+.||.|||++||||+|||+-
T Consensus        87 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~-------l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~  147 (343)
T cd07878          87 TSIENFNEVYLVTNLMGADLNNIVKCQK-------LSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPS  147 (343)
T ss_pred             ccccccCcEEEEeecCCCCHHHHHhcCC-------CCHHHHHHHHHHHHHHHHHHHHCCeecccCChh
Confidence                  4589999999889998876432       899999999999999999999999999999963

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.73  E-value=2.6e-17  Score=167.34  Aligned_cols=118  Identities=21%  Similarity=0.242  Sum_probs=104.1

Q ss_pred             EEeccCCceEEEEEEEC---CCCcEEEEEEEecCh-----hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEE
Q 008813          420 EYLGSAAFSKVFQAQDL---HTGVDVCLKIIKNDK-----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL  491 (552)
Q Consensus       420 e~LGkG~FG~VykA~Dk---ktg~~VAVKIIk~sk-----~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hL  491 (552)
                      +.||+|+||.||+|++.   .+++.||||+++...     .....+.+|+.+|+.++|      |||++++++|...+.+
T Consensus         2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~h------p~iv~~~~~~~~~~~~   75 (323)
T cd05584           2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKH------PFIVDLIYAFQTGGKL   75 (323)
T ss_pred             ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCC------CchhceeeEEecCCeE
Confidence            68999999999999874   468899999997532     223456789999999998      9999999999999999


Q ss_pred             EEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          492 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       492 yIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ||||||+.+ +|.++++....      +++..++.++.||+.||.|||++||||+|||+
T Consensus        76 ~lv~e~~~~~~L~~~~~~~~~------~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp  128 (323)
T cd05584          76 YLILEYLSGGELFMHLEREGI------FMEDTACFYLSEISLALEHLHQQGIIYRDLKP  128 (323)
T ss_pred             EEEEeCCCCchHHHHHHHcCC------CCHHHHHHHHHHHHHHHHHHHHCCeecCCCCH
Confidence            999999987 99999876543      88999999999999999999999999999996

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.73  E-value=5.5e-17  Score=159.17  Aligned_cols=126  Identities=21%  Similarity=0.248  Sum_probs=112.3

Q ss_pred             ceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecCh--hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEEE
Q 008813          415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLF  492 (552)
Q Consensus       415 RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk--~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hLy  492 (552)
                      +|++++.||.|++|.||+|.+..+++.||||+++...  .....+.+|+.+++.++|      +||+++++++...++++
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h------~~i~~~~~~~~~~~~~~   74 (284)
T cd07836           1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKH------ENIVRLHDVIHTENKLM   74 (284)
T ss_pred             CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcC------CCEeeeeeeEeeCCcEE
Confidence            5899999999999999999999999999999987642  234567789999999998      99999999999999999


Q ss_pred             EEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          493 IVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       493 IVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      |||||+.++|.+++......   .++++..++.++.||+.||.|||++||+|++|++
T Consensus        75 lv~e~~~~~l~~~~~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p  128 (284)
T cd07836          75 LVFEYMDKDLKKYMDTHGVR---GALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKP  128 (284)
T ss_pred             EEEecCCccHHHHHHhcCCC---CCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCH
Confidence            99999999999998765421   2389999999999999999999999999999986

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=99.73  E-value=3.5e-17  Score=168.75  Aligned_cols=124  Identities=23%  Similarity=0.260  Sum_probs=109.2

Q ss_pred             ecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC---hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeC
Q 008813          412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL  488 (552)
Q Consensus       412 i~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s---k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~  488 (552)
                      +.+||++++.||+|+||.||+|.+..+++.||||++...   ......+.+|+.+++.++|      +||+++++++...
T Consensus        22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h------~~ii~~~~~~~~~   95 (364)
T cd07875          22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH------KNIIGLLNVFTPQ   95 (364)
T ss_pred             hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCC------CCccccceeeccc
Confidence            458999999999999999999999999999999999753   2334567899999999998      9999999988643


Q ss_pred             ------CEEEEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          489 ------EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       489 ------~hLyIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                            .++|+||||+.++|.+++...        +++..++.++.||+.||.|||++||||+|||+
T Consensus        96 ~~~~~~~~~~lv~e~~~~~l~~~~~~~--------~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp  154 (364)
T cd07875          96 KSLEEFQDVYIVMELMDANLCQVIQME--------LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKP  154 (364)
T ss_pred             ccccccCeEEEEEeCCCCCHHHHHHhc--------CCHHHHHHHHHHHHHHHHHHhhCCeecCCCCH
Confidence                  368999999999998887531        78999999999999999999999999999996

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.73  E-value=2.9e-17  Score=162.87  Aligned_cols=124  Identities=26%  Similarity=0.284  Sum_probs=111.0

Q ss_pred             ceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChh------hHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeC
Q 008813          415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD------FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL  488 (552)
Q Consensus       415 RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~------~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~  488 (552)
                      ||.+.+.||+|+||.||+|.+..+++.||||.++....      ....+..|+.+++.++|      +||+++++++...
T Consensus         1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h------~~i~~~~~~~~~~   74 (298)
T cd07841           1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKH------PNIIGLLDVFGHK   74 (298)
T ss_pred             CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCC------CCChhhhheeecC
Confidence            68899999999999999999999999999999976422      23456789999999998      9999999999999


Q ss_pred             CEEEEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          489 EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       489 ~hLyIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      +++++||||+.++|.++++....     .+++..++.++.||+.||.|||++||+|.+|++
T Consensus        75 ~~~~lv~e~~~~~L~~~i~~~~~-----~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p  130 (298)
T cd07841          75 SNINLVFEFMETDLEKVIKDKSI-----VLTPADIKSYMLMTLRGLEYLHSNWILHRDLKP  130 (298)
T ss_pred             CEEEEEEcccCCCHHHHHhccCC-----CCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCh
Confidence            99999999997799999986541     289999999999999999999999999999986

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=99.73  E-value=5.3e-17  Score=160.78  Aligned_cols=126  Identities=21%  Similarity=0.178  Sum_probs=110.9

Q ss_pred             CceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecCh--hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEE
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL  491 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk--~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hL  491 (552)
                      .+|.+++.||+|+||.||+|.+..+++.||||+++...  .....+.+|+.+++.++|      +||+++++++...+..
T Consensus         5 ~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h------~ni~~~~~~~~~~~~~   78 (291)
T cd07870           5 TSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKH------ANIVLLHDIIHTKETL   78 (291)
T ss_pred             ceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCC------CCEeEEEEEEecCCeE
Confidence            57999999999999999999999999999999997542  222356789999999998      9999999999999999


Q ss_pred             EEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          492 FIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       492 yIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      |+||||+.++|.+++.....     .+++..++.++.||+.||.|||+++|+|.+|++-
T Consensus        79 ~lv~e~~~~~l~~~~~~~~~-----~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~  132 (291)
T cd07870          79 TFVFEYMHTDLAQYMIQHPG-----GLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQ  132 (291)
T ss_pred             EEEEecccCCHHHHHHhCCC-----CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChH
Confidence            99999998898888765432     2788999999999999999999999999999863

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.73  E-value=3.5e-17  Score=162.38  Aligned_cols=120  Identities=20%  Similarity=0.187  Sum_probs=103.3

Q ss_pred             eccCCceEEEEEEECCCCcEEEEEEEecCh----hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEEEEEEec
Q 008813          422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCEL  497 (552)
Q Consensus       422 LGkG~FG~VykA~Dkktg~~VAVKIIk~sk----~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hLyIVmEl  497 (552)
                      ||+|+||+||+|.++.+++.||+|++....    ...+.+..|+++++.++|      +||++++++|....++||||||
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~------~~i~~~~~~~~~~~~~~lv~e~   74 (280)
T cd05608           1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHS------RFIVSLAYAFQTKTDLCLVMTI   74 (280)
T ss_pred             CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCC------CcEeeeeEEEcCCCeEEEEEeC
Confidence            799999999999999999999999997532    123556789999999988      9999999999999999999999


Q ss_pred             CCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          498 LRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       498 l~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      +.+ +|..++.......  ..+++..++.|+.||+.||.|||+++|||+||++
T Consensus        75 ~~~g~L~~~~~~~~~~~--~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp  125 (280)
T cd05608          75 MNGGDLRYHIYNVDEEN--PGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKP  125 (280)
T ss_pred             CCCCCHHHHHHhccccC--CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCH
Confidence            987 8988775432211  2389999999999999999999999999999986

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.73  E-value=2e-17  Score=162.58  Aligned_cols=127  Identities=23%  Similarity=0.274  Sum_probs=113.8

Q ss_pred             cCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC-hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEE
Q 008813          413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND-KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL  491 (552)
Q Consensus       413 ~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s-k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hL  491 (552)
                      .++|++++.||.|+||.||++.+..++..+|+|++... ....+.+.+|+++++.++|      +||+++++.+..+..+
T Consensus         4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h------~~i~~~~~~~~~~~~~   77 (280)
T cd06611           4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKH------PNIVGLYEAYFYENKL   77 (280)
T ss_pred             hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCC------CceeEEEEEEecCCeE
Confidence            46799999999999999999999989999999999764 3344678899999999998      9999999999999999


Q ss_pred             EEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          492 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       492 yIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      |+||||+.+ +|.+++.....     ++++..++.++.||+.||.|||+++|+|.+|++-
T Consensus        78 ~lv~e~~~~~~L~~~~~~~~~-----~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~  132 (280)
T cd06611          78 WILIEFCDGGALDSIMLELER-----GLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAG  132 (280)
T ss_pred             EEEeeccCCCcHHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChh
Confidence            999999988 89998876542     2899999999999999999999999999999863

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.73  E-value=3.8e-17  Score=167.07  Aligned_cols=119  Identities=17%  Similarity=0.198  Sum_probs=104.6

Q ss_pred             EEeccCCceEEEEEEECCCCcEEEEEEEecC----hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEEEEEE
Q 008813          420 EYLGSAAFSKVFQAQDLHTGVDVCLKIIKND----KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVC  495 (552)
Q Consensus       420 e~LGkG~FG~VykA~Dkktg~~VAVKIIk~s----k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hLyIVm  495 (552)
                      +.||+|+||.||+|++..+++.||+|++++.    ......+.+|+.++..+.+|     |||+++++++...+.+||||
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~h-----p~iv~~~~~~~~~~~~~lv~   75 (329)
T cd05618           1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNH-----PFLVGLHSCFQTESRLFFVI   75 (329)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCC-----CcCCceeeEEEeCCEEEEEE
Confidence            3699999999999999999999999999863    22345677899998887443     99999999999999999999


Q ss_pred             ecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          496 ELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       496 Ell~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ||+.+ +|..++.....      +++..++.|+.||+.||.|||++||||+|||+
T Consensus        76 E~~~~~~L~~~~~~~~~------l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp  124 (329)
T cd05618          76 EYVNGGDLMFHMQRQRK------LPEEHARFYSAEISLALNYLHERGIIYRDLKL  124 (329)
T ss_pred             eCCCCCCHHHHHHHcCC------CCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCH
Confidence            99987 89888876543      89999999999999999999999999999996

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.73  E-value=6.1e-17  Score=163.07  Aligned_cols=123  Identities=19%  Similarity=0.134  Sum_probs=111.5

Q ss_pred             ceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC--hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEEE
Q 008813          415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLF  492 (552)
Q Consensus       415 RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s--k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hLy  492 (552)
                      +|++.+.||+|+||.||++.+..++..+|+|+++..  .....++.+|+++++.++|      |||++++++|...+++|
T Consensus         2 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h------~~iv~~~~~~~~~~~~~   75 (308)
T cd06615           2 DFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNS------PYIVGFYGAFYSDGEIS   75 (308)
T ss_pred             CceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCC------CCCCeEEEEEeeCCEEE
Confidence            589999999999999999999999999999998754  3345678899999999998      99999999999999999


Q ss_pred             EEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHh-CCCeeeeccc
Q 008813          493 IVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFL-LLVIYFILFC  549 (552)
Q Consensus       493 IVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs-~gIIH~~L~~  549 (552)
                      |||||+.+ +|.++++....      +++..++.++.||+.||.|||+ ++|+|++|++
T Consensus        76 lv~ey~~~~~L~~~l~~~~~------~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p  128 (308)
T cd06615          76 ICMEHMDGGSLDQVLKKAGR------IPENILGKISIAVLRGLTYLREKHKIMHRDVKP  128 (308)
T ss_pred             EEeeccCCCcHHHHHHhcCC------CCHHHHHHHHHHHHHHHHHHHhhCCEEECCCCh
Confidence            99999987 99999986543      8999999999999999999997 6999999986

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.73  E-value=3.9e-17  Score=167.78  Aligned_cols=133  Identities=23%  Similarity=0.274  Sum_probs=115.2

Q ss_pred             CcceeeCc---eecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC---hhhHHHHHHHHHHHHHhcccCCCCCC
Q 008813          403 DLPIILNT---VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEH  476 (552)
Q Consensus       403 ~y~v~~gd---vi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s---k~~~~~~lrEIkILk~L~hhd~~d~p  476 (552)
                      ++++.+++   .+.++|++++.||+|+||.||+|.+..+++.||||++.+.   ......+.+|+.+++.++|      +
T Consensus         2 ~~~~~~~~~~~~~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h------~   75 (353)
T cd07850           2 FYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNH------K   75 (353)
T ss_pred             ceeecccchhhhhhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCC------C
Confidence            45666766   4578999999999999999999999999999999998642   2334567789999999998      9


Q ss_pred             CeeEeEeEEEeC------CEEEEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          477 HILRLYDYFYHL------EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       477 nIVrL~d~F~~~------~hLyIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ||++++++|...      .++||||||+.++|.+.+...        +++..++.++.||+.||.|||++||+|++||+
T Consensus        76 ~iv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~--------l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp  146 (353)
T cd07850          76 NIIGLLNVFTPQKSLEEFQDVYLVMELMDANLCQVIQMD--------LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKP  146 (353)
T ss_pred             CCcceeeeeccCCCccccCcEEEEEeccCCCHHHHHhhc--------CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCH
Confidence            999999998644      368999999999999887642        78999999999999999999999999999986

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.73  E-value=5.3e-17  Score=159.07  Aligned_cols=125  Identities=18%  Similarity=0.185  Sum_probs=108.7

Q ss_pred             CceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecCh---hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCE
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH  490 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk---~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~h  490 (552)
                      ++|++.+.||+|+||.||+|.++.+++.||+|++....   ...+.+.+|+.+++.++|      +||+++++++....+
T Consensus         1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h------~~i~~~~~~~~~~~~   74 (286)
T cd07847           1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKH------PNLVNLIEVFRRKRK   74 (286)
T ss_pred             CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCC------CCEeeeeeEEeeCCE
Confidence            47999999999999999999999999999999986532   233567899999999998      999999999999999


Q ss_pred             EEEEEecCCCC-HHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          491 LFIVCELLRAN-LYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       491 LyIVmEll~Gs-L~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      +++||||+.+. |..+++....      +++..++.++.||+.||.|||+++|+|++|++-
T Consensus        75 ~~~v~e~~~~~~l~~~~~~~~~------~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~  129 (286)
T cd07847          75 LHLVFEYCDHTVLNELEKNPRG------VPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPE  129 (286)
T ss_pred             EEEEEeccCccHHHHHHhCCCC------CCHHHHHHHHHHHHHHHHHHHHCCceecCCChh
Confidence            99999999984 5544443322      899999999999999999999999999999974

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.73  E-value=3.6e-17  Score=165.68  Aligned_cols=118  Identities=19%  Similarity=0.257  Sum_probs=101.3

Q ss_pred             EEeccCCceEEEEEEECCCCcEEEEEEEecCh----hhHHHHHHHHH-HHHHhcccCCCCCCCeeEeEeEEEeCCEEEEE
Q 008813          420 EYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIK-LLKLVNKNDPADEHHILRLYDYFYHLEHLFIV  494 (552)
Q Consensus       420 e~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk----~~~~~~lrEIk-ILk~L~hhd~~d~pnIVrL~d~F~~~~hLyIV  494 (552)
                      +.||+|+||+||+|++..+++.||||++.+..    .....+.+|+. +++.++|      +||+++++++...+.+|||
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h------~~iv~~~~~~~~~~~~~lv   74 (321)
T cd05603           1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKH------PFLVGLHYSFQTAEKLYFV   74 (321)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCC------CCccceeeEEEcCCEEEEE
Confidence            36999999999999999999999999997532    12334555654 5677887      9999999999999999999


Q ss_pred             EecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          495 CELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       495 mEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      |||+.+ +|...+.....      +++..++.|+.||+.||.|||++||||+|||+
T Consensus        75 ~e~~~~~~L~~~l~~~~~------~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp  124 (321)
T cd05603          75 LDYVNGGELFFHLQRERC------FLEPRARFYAAEVASAIGYLHSLNIIYRDLKP  124 (321)
T ss_pred             EcCCCCCCHHHHHHHcCC------CCHHHHHHHHHHHHHHHHHHHHCCeEeccCCH
Confidence            999987 89888876443      89999999999999999999999999999996

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.73  E-value=4e-17  Score=173.46  Aligned_cols=127  Identities=20%  Similarity=0.214  Sum_probs=117.9

Q ss_pred             cCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecCh--hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCE
Q 008813          413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH  490 (552)
Q Consensus       413 ~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk--~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~h  490 (552)
                      .+.|++.+.||.|.-++||+|+...+++.||||++...+  ...+.+.+|+..++.++|      |||++++..|.....
T Consensus        25 ~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~H------PNIv~~~~sFvv~~~   98 (516)
T KOG0582|consen   25 AKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDH------PNIVTYHCSFVVDSE   98 (516)
T ss_pred             ccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCC------CCcceEEEEEEecce
Confidence            357999999999999999999999999999999998753  235789999999999999      999999999999999


Q ss_pred             EEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          491 LFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       491 LyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      +|+||.||.+ ++.++++..-..|    |.|..|..|++++++||.|||++|.||||+|+
T Consensus        99 LWvVmpfMa~GS~ldIik~~~~~G----l~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKA  154 (516)
T KOG0582|consen   99 LWVVMPFMAGGSLLDIIKTYYPDG----LEEASIATILREVLKALDYLHQNGHIHRDVKA  154 (516)
T ss_pred             eEEeehhhcCCcHHHHHHHHcccc----ccHHHHHHHHHHHHHHHHHHHhcCceeccccc
Confidence            9999999987 9999999887666    99999999999999999999999999999997

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.73  E-value=2.9e-17  Score=171.60  Aligned_cols=134  Identities=19%  Similarity=0.187  Sum_probs=111.6

Q ss_pred             eecCceEEEEEeccCCceEEEEEEECCC-----CcEEEEEEEecC--hhhHHHHHHHHHHHHHh-cccCCCCCCCeeEeE
Q 008813          411 VIAGRYYVTEYLGSAAFSKVFQAQDLHT-----GVDVCLKIIKND--KDFFDQSLDEIKLLKLV-NKNDPADEHHILRLY  482 (552)
Q Consensus       411 vi~~RY~Ile~LGkG~FG~VykA~Dkkt-----g~~VAVKIIk~s--k~~~~~~lrEIkILk~L-~hhd~~d~pnIVrL~  482 (552)
                      ...++|++.+.||+|+||.||+|.+...     ++.||||+++..  ......+.+|+.+++.+ +|      +|||+++
T Consensus        35 ~~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h------~nIv~~~  108 (374)
T cd05106          35 FPRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQH------KNIVNLL  108 (374)
T ss_pred             ccHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccC------CceeeEe
Confidence            4457899999999999999999986543     357999999753  33456788999999999 56      9999999


Q ss_pred             eEEEeCCEEEEEEecCCC-CHHHHHHhhccC-------------------------------------------------
Q 008813          483 DYFYHLEHLFIVCELLRA-NLYEFQKFNQES-------------------------------------------------  512 (552)
Q Consensus       483 d~F~~~~hLyIVmEll~G-sL~d~Lk~~~~~-------------------------------------------------  512 (552)
                      +++...+++||||||+.+ +|.++++.....                                                 
T Consensus       109 ~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (374)
T cd05106         109 GACTHGGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVS  188 (374)
T ss_pred             eEecCCCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcc
Confidence            999999999999999987 999998754210                                                 


Q ss_pred             ---------------CCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          513 ---------------GGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       513 ---------------g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                                     ....++++..++.|+.||+.||.|||++||||+|||+-
T Consensus       189 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~  241 (374)
T cd05106         189 SSSSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAAR  241 (374)
T ss_pred             ccccccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchh
Confidence                           00124788999999999999999999999999999973

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.73  E-value=5.2e-17  Score=183.10  Aligned_cols=124  Identities=17%  Similarity=0.180  Sum_probs=112.4

Q ss_pred             CceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC----hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCC
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND----KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE  489 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s----k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~  489 (552)
                      ++|.++++||+|+||.||+|.+..+++.||||+++..    ......+..|+.+++.++|      +||++++..+....
T Consensus         4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~h------p~Iv~~~~~~~~~~   77 (669)
T cd05610           4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKS------PFIVHLYYSLQSAN   77 (669)
T ss_pred             CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCC------CCcCeEEEEEEECC
Confidence            6799999999999999999999999999999999753    2334678899999999998      99999999999999


Q ss_pred             EEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          490 HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       490 hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ++||||||+.+ +|.+++.....      +++..++.|+.||+.||.|||.++|||+|||+
T Consensus        78 ~~~lVmEy~~g~~L~~li~~~~~------l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKP  132 (669)
T cd05610          78 NVYLVMEYLIGGDVKSLLHIYGY------FDEEMAVKYISEVALALDYLHRHGIIHRDLKP  132 (669)
T ss_pred             EEEEEEeCCCCCCHHHHHHhcCC------CCHHHHHHHHHHHHHHHHHHHhCCEEeCCccH
Confidence            99999999976 99999976542      89999999999999999999999999999986

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.73  E-value=4e-17  Score=166.03  Aligned_cols=119  Identities=26%  Similarity=0.311  Sum_probs=103.4

Q ss_pred             EEeccCCceEEEEEEECCCCcEEEEEEEecCh----hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEEEEEE
Q 008813          420 EYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVC  495 (552)
Q Consensus       420 e~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk----~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hLyIVm  495 (552)
                      +.||+|+||.||+|++..+++.||||+++...    ........|..+++.+.+|     |||+++++++...+++||||
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h-----p~iv~~~~~~~~~~~~~lv~   75 (316)
T cd05619           1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEH-----PFLTHLYCTFQTKENLFFVM   75 (316)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCC-----CcCcceEEEEEeCCEEEEEE
Confidence            36999999999999999999999999998642    2234567788888875333     99999999999999999999


Q ss_pred             ecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          496 ELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       496 Ell~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ||+.+ +|.++++....      +++..+..++.||+.||.|||+++|||+|||+
T Consensus        76 ey~~~g~L~~~l~~~~~------~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp  124 (316)
T cd05619          76 EYLNGGDLMFHIQSCHK------FDLPRATFYAAEIICGLQFLHSKGIVYRDLKL  124 (316)
T ss_pred             eCCCCCcHHHHHHHcCC------CCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCH
Confidence            99976 99999886543      89999999999999999999999999999986

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.73  E-value=5.8e-17  Score=161.39  Aligned_cols=129  Identities=16%  Similarity=0.293  Sum_probs=112.6

Q ss_pred             ceEEEEEeccCCceEEEEEEECC--CCcEEEEEEEecC----hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeC
Q 008813          415 RYYVTEYLGSAAFSKVFQAQDLH--TGVDVCLKIIKND----KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL  488 (552)
Q Consensus       415 RY~Ile~LGkG~FG~VykA~Dkk--tg~~VAVKIIk~s----k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~  488 (552)
                      ||.+.+.||+|+||.||+|.+..  +++.||||++...    ........+|+.+++.++|      |||+++++++...
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h------~~i~~~~~~~~~~   74 (316)
T cd07842           1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKH------ENVVSLVEVFLEH   74 (316)
T ss_pred             CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCC------CCccceEEEEeCC
Confidence            68999999999999999999988  8999999999863    2344677899999999998      9999999999988


Q ss_pred             --CEEEEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          489 --EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       489 --~hLyIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                        .++||||||++++|.+++........ .++++..++.|+.||+.||.|||+++|+|++|++-
T Consensus        75 ~~~~~~lv~e~~~~~l~~~~~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~  137 (316)
T cd07842          75 ADKSVYLLFDYAEHDLWQIIKFHRQAKR-VSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPA  137 (316)
T ss_pred             CCceEEEEEeCCCcCHHHHHHhhccCCC-cCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHH
Confidence              88999999999999888875443211 23899999999999999999999999999999863

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.73  E-value=2.2e-17  Score=160.85  Aligned_cols=125  Identities=17%  Similarity=0.257  Sum_probs=112.2

Q ss_pred             cCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecCh-hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEE
Q 008813          413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK-DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL  491 (552)
Q Consensus       413 ~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk-~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hL  491 (552)
                      .++|.+.+.||+|+||.||+|++..+++.||||+++... .....+.+|+.+++.++|      |||+++++.+...+.+
T Consensus         8 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h------~~ii~~~~~~~~~~~~   81 (267)
T cd06645           8 QEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKH------SNIVAYFGSYLRRDKL   81 (267)
T ss_pred             HHHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCC------CCeeeEEEEEEeCCEE
Confidence            357888999999999999999999999999999998652 223457789999999998      9999999999999999


Q ss_pred             EEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          492 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       492 yIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      |+||||+.+ +|.++++..+.      +++..++.++.||+.||.|||++||+|++|++
T Consensus        82 ~lv~e~~~~~~L~~~~~~~~~------~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp  134 (267)
T cd06645          82 WICMEFCGGGSLQDIYHVTGP------LSESQIAYVSRETLQGLYYLHSKGKMHRDIKG  134 (267)
T ss_pred             EEEEeccCCCcHHHHHHhcCC------CCHHHHHHHHHHHHHHHHHHHHCCeecCCCCH
Confidence            999999987 99999876543      89999999999999999999999999999986

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.73  E-value=4.1e-17  Score=165.59  Aligned_cols=119  Identities=24%  Similarity=0.280  Sum_probs=104.9

Q ss_pred             EEeccCCceEEEEEEECCCCcEEEEEEEecCh----hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEEEEEE
Q 008813          420 EYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVC  495 (552)
Q Consensus       420 e~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk----~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hLyIVm  495 (552)
                      +.||+|+||.||+|.+..+++.||||++++..    .......+|+++++.+.+|     +||+++++++...+++|+||
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h-----~~i~~~~~~~~~~~~~~lv~   75 (318)
T cd05570           1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKH-----PFLTQLHSCFQTKDRLFFVM   75 (318)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCC-----CCccceeeEEEcCCEEEEEE
Confidence            36999999999999999999999999998642    2345667899999888544     99999999999999999999


Q ss_pred             ecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          496 ELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       496 Ell~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ||+.+ +|..++.....      +++..++.++.||+.||.|||+++|+|++||+
T Consensus        76 e~~~~~~L~~~~~~~~~------l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp  124 (318)
T cd05570          76 EYVNGGDLMFHIQRSGR------FDEPRARFYAAEIVLGLQFLHERGIIYRDLKL  124 (318)
T ss_pred             cCCCCCCHHHHHHHcCC------CCHHHHHHHHHHHHHHHHHHHhCCeEccCCCH
Confidence            99987 99988876543      89999999999999999999999999999986

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.73  E-value=6.7e-17  Score=158.36  Aligned_cols=124  Identities=24%  Similarity=0.287  Sum_probs=111.8

Q ss_pred             ceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC---hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEE
Q 008813          415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL  491 (552)
Q Consensus       415 RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s---k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hL  491 (552)
                      +|++.+.||+|+||.||+|.+..+++.||||++...   ......+.+|+.+++.++|      +||+++++++.....+
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~------~~i~~~~~~~~~~~~~   74 (286)
T cd07832           1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQH------PYVVKLLDVFPHGSGF   74 (286)
T ss_pred             CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCC------CCCcceeeEEecCCee
Confidence            689999999999999999999999999999999754   2234678899999999997      9999999999999999


Q ss_pred             EEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          492 FIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       492 yIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ++||||++++|.+++.....     ++++..++.++.||+.||.|||++||+|.+|++
T Consensus        75 ~~v~e~~~~~L~~~~~~~~~-----~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p  127 (286)
T cd07832          75 VLVMEYMPSDLSEVLRDEER-----PLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKP  127 (286)
T ss_pred             EEEecccCCCHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCH
Confidence            99999996699999876542     289999999999999999999999999999986

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.73  E-value=5.9e-17  Score=160.11  Aligned_cols=130  Identities=25%  Similarity=0.256  Sum_probs=111.9

Q ss_pred             CceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecCh---hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCE
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH  490 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk---~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~h  490 (552)
                      ++|++.+.||+|+||.||+|.+..+++.||||+++...   .....+.+|+.+++.+.+|     +||+++++++...+.
T Consensus         1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~-----~~i~~~~~~~~~~~~   75 (295)
T cd07837           1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSES-----IYIVRLLDVEHVEEK   75 (295)
T ss_pred             CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCC-----CCccceeeeEeecCC
Confidence            47999999999999999999999999999999987542   2335678899999999775     999999999987765


Q ss_pred             -----EEEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          491 -----LFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       491 -----LyIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                           +|+||||+.++|.+++...... ...++++..++.++.||+.||.|||+++|+|++|++
T Consensus        76 ~~~~~~~lv~e~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~  138 (295)
T cd07837          76 NGKPSLYLVFEYLDSDLKKFMDSNGRG-PGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKP  138 (295)
T ss_pred             CCCceEEEEeeccCcCHHHHHHHhccc-CCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCh
Confidence                 8999999999999988764322 112489999999999999999999999999999986

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.73  E-value=4.2e-17  Score=165.58  Aligned_cols=118  Identities=20%  Similarity=0.271  Sum_probs=101.3

Q ss_pred             EEeccCCceEEEEEEECCCCcEEEEEEEecCh----hhHHHHHHHHH-HHHHhcccCCCCCCCeeEeEeEEEeCCEEEEE
Q 008813          420 EYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIK-LLKLVNKNDPADEHHILRLYDYFYHLEHLFIV  494 (552)
Q Consensus       420 e~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk----~~~~~~lrEIk-ILk~L~hhd~~d~pnIVrL~d~F~~~~hLyIV  494 (552)
                      +.||+|+||+||+|++..+++.||||++....    .....+..|.. +++.++|      |||+++++.+...+.+|||
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~h------p~iv~~~~~~~~~~~~~lv   74 (323)
T cd05575           1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKH------PFLVGLHYSFQTADKLYFV   74 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCC------CCCCCeeEEEEeCCEEEEE
Confidence            36999999999999999999999999997532    12234555555 4566877      9999999999999999999


Q ss_pred             EecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          495 CELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       495 mEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      |||+.+ +|..++.....      +++..++.++.||+.||.|||++||+|+|||+
T Consensus        75 ~e~~~~g~L~~~l~~~~~------~~~~~~~~~~~qi~~~l~~lH~~givH~dikp  124 (323)
T cd05575          75 LDYVNGGELFFHLQRERS------FPEPRARFYAAEIASALGYLHSLNIIYRDLKP  124 (323)
T ss_pred             EcCCCCCCHHHHHHhcCC------CCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCH
Confidence            999987 99998876543      89999999999999999999999999999996

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.73  E-value=4.4e-17  Score=165.54  Aligned_cols=118  Identities=19%  Similarity=0.266  Sum_probs=101.2

Q ss_pred             EEeccCCceEEEEEEECCCCcEEEEEEEecCh----hhHHHHHHHHH-HHHHhcccCCCCCCCeeEeEeEEEeCCEEEEE
Q 008813          420 EYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIK-LLKLVNKNDPADEHHILRLYDYFYHLEHLFIV  494 (552)
Q Consensus       420 e~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk----~~~~~~lrEIk-ILk~L~hhd~~d~pnIVrL~d~F~~~~hLyIV  494 (552)
                      +.||+|+||+||+|.+..+++.||||++....    .....+..|.. +++.++|      |||+++++.+...+.+|||
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h------p~iv~~~~~~~~~~~~~lv   74 (325)
T cd05604           1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKH------PFLVGLHYSFQTTEKLYFV   74 (325)
T ss_pred             CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCC------CCCccEEEEEecCCEEEEE
Confidence            36899999999999999999999999997542    22344556655 4566777      9999999999999999999


Q ss_pred             EecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          495 CELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       495 mEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      |||+.+ +|..++.....      +++..++.++.||+.||.|||++||||+|||+
T Consensus        75 ~e~~~~~~L~~~l~~~~~------~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp  124 (325)
T cd05604          75 LDFVNGGELFFHLQRERS------FPEPRARFYAAEIASALGYLHSINIVYRDLKP  124 (325)
T ss_pred             EcCCCCCCHHHHHHHcCC------CCHHHHHHHHHHHHHHHHHHHHCCeeecCCCH
Confidence            999987 89888876543      89999999999999999999999999999996

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.73  E-value=1.2e-16  Score=154.26  Aligned_cols=126  Identities=21%  Similarity=0.280  Sum_probs=113.7

Q ss_pred             cCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC-hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEE
Q 008813          413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND-KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL  491 (552)
Q Consensus       413 ~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s-k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hL  491 (552)
                      .++|++.+.||.|+||.||+|.+..+++.+|+|++... ....+.+.+|+.+++.++|      +||+++++++.....+
T Consensus         2 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h------~~i~~~~~~~~~~~~~   75 (262)
T cd06613           2 QEDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRH------PNIVAYFGSYLRRDKL   75 (262)
T ss_pred             ccceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCC------CChhceEEEEEeCCEE
Confidence            35799999999999999999999999999999999864 2245778899999999998      9999999999999999


Q ss_pred             EEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          492 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       492 yIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      |++|||+++ +|.++++....     ++++..++.++.|++.||.|||+++|+|.+|++
T Consensus        76 ~l~~e~~~~~~l~~~~~~~~~-----~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p  129 (262)
T cd06613          76 WIVMEYCGGGSLQDIYQVTRG-----PLSELQIAYVCRETLKGLAYLHETGKIHRDIKG  129 (262)
T ss_pred             EEEEeCCCCCcHHHHHHhhcc-----CCCHHHHHHHHHHHHHHHHHHHhCCceecCCCh
Confidence            999999987 89998876532     289999999999999999999999999999986

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=99.73  E-value=2.7e-17  Score=173.77  Aligned_cols=123  Identities=20%  Similarity=0.177  Sum_probs=105.9

Q ss_pred             eEEEEEeccCCceEEEEEEECCCCcE-EEEEEEecCh---hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCC-E
Q 008813          416 YYVTEYLGSAAFSKVFQAQDLHTGVD-VCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE-H  490 (552)
Q Consensus       416 Y~Ile~LGkG~FG~VykA~Dkktg~~-VAVKIIk~sk---~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~-h  490 (552)
                      ..+.+.||+|+||+||++.++  |.. ||||++....   ...+.+.+|+.+|.+|+|      ||||++++++.... .
T Consensus        43 l~~~~~iG~G~~g~V~~~~~~--g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~H------pNIV~f~G~~~~~~~~  114 (362)
T KOG0192|consen   43 LPIEEVLGSGSFGTVYKGKWR--GTDVVAVKIISDPDFDDESRKAFRREASLLSRLRH------PNIVQFYGACTSPPGS  114 (362)
T ss_pred             hhhhhhcccCCceeEEEEEeC--CceeEEEEEecchhcChHHHHHHHHHHHHHHhCCC------CCeeeEEEEEcCCCCc
Confidence            344456999999999999986  445 9999998642   225689999999999999      99999999999887 7


Q ss_pred             EEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCC-Ceeeecccc
Q 008813          491 LFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLL-VIYFILFCF  550 (552)
Q Consensus       491 LyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~g-IIH~~L~~~  550 (552)
                      ++|||||+.+ +|.+++......    .++...+..|+.||+.||.|||+++ |||+|||+-
T Consensus       115 ~~iVtEy~~~GsL~~~l~~~~~~----~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~  172 (362)
T KOG0192|consen  115 LCIVTEYMPGGSLSVLLHKKRKR----KLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSD  172 (362)
T ss_pred             eEEEEEeCCCCcHHHHHhhcccC----CCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChh
Confidence            9999999987 999999874222    2999999999999999999999999 999999973

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.72  E-value=6e-17  Score=157.29  Aligned_cols=128  Identities=20%  Similarity=0.223  Sum_probs=112.1

Q ss_pred             ecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEE
Q 008813          412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL  491 (552)
Q Consensus       412 i~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hL  491 (552)
                      -.++|+++++||+|+||.||+|.+. .+..||+|.+.......+.+.+|+.+++.++|      +||+++++.+...+.+
T Consensus         4 ~~~~~~~~~~lg~g~~g~v~~~~~~-~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h------~~i~~~~~~~~~~~~~   76 (261)
T cd05072           4 PRESIKLVKKLGAGQFGEVWMGYYN-NSTKVAVKTLKPGTMSVQAFLEEANLMKTLQH------DKLVRLYAVVTKEEPI   76 (261)
T ss_pred             chHHeEEeeecCCcCCceEEEEEec-CCceEEEEEccCCchhHHHHHHHHHHHHhCCC------CCeeeEEEEEcCCCCc
Confidence            3467999999999999999999865 45679999987655455788899999999998      9999999999999999


Q ss_pred             EEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          492 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       492 yIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      ++||||+.+ +|.++++......    +++..+..++.||+.||.|||+++|+|++|++-
T Consensus        77 ~lv~e~~~~~~L~~~l~~~~~~~----~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~  132 (261)
T cd05072          77 YIITEYMAKGSLLDFLKSDEGGK----VLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAA  132 (261)
T ss_pred             EEEEecCCCCcHHHHHHHhcCCC----CCHHHHHHHHHHHHHHHHHHHHCCeeccccchh
Confidence            999999976 9999997654322    889999999999999999999999999999974

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.72  E-value=4.3e-17  Score=157.48  Aligned_cols=120  Identities=19%  Similarity=0.219  Sum_probs=106.6

Q ss_pred             EEeccCCceEEEEEEECCCCcEEEEEEEecC--hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEEEEEEec
Q 008813          420 EYLGSAAFSKVFQAQDLHTGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCEL  497 (552)
Q Consensus       420 e~LGkG~FG~VykA~Dkktg~~VAVKIIk~s--k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hLyIVmEl  497 (552)
                      +.||+|+||.||+|.++.+++.||+|++...  ......+.+|+++++.++|      +||+++++++.....+||||||
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h------~~i~~~~~~~~~~~~~~lv~e~   74 (252)
T cd05084           1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSH------PNIVRLIGVCTQKQPIYIVMEL   74 (252)
T ss_pred             CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCC------CCcceEEEEEcCCCCeEEEEee
Confidence            3689999999999999999999999988643  3445678999999999998      9999999999999999999999


Q ss_pred             CCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          498 LRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       498 l~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      +.+ +|.+++.....     .+++..++.++.||+.||.|||+++|+|++|++-
T Consensus        75 ~~~~~L~~~~~~~~~-----~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~  123 (252)
T cd05084          75 VQGGDFLTFLRTEGP-----RLKVKELIQMVENAAAGMEYLESKHCIHRDLAAR  123 (252)
T ss_pred             ccCCcHHHHHHhCCC-----CCCHHHHHHHHHHHHHHHHHHHhCCccccccchh
Confidence            977 99999876432     2899999999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.72  E-value=1.2e-16  Score=154.36  Aligned_cols=126  Identities=17%  Similarity=0.183  Sum_probs=112.8

Q ss_pred             ceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC---hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEE
Q 008813          415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL  491 (552)
Q Consensus       415 RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s---k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hL  491 (552)
                      ||++++.||.|+||.|+.+++..+++.+++|.+...   ......+.+|+.++++++|      +||+++++++...+.+
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h------~~i~~~~~~~~~~~~~   74 (256)
T cd08221           1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQH------PNIIAYYNHFMDDNTL   74 (256)
T ss_pred             CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCC------CCeeEEEeEEecCCeE
Confidence            699999999999999999999999999999988753   3344678899999999988      9999999999999999


Q ss_pred             EEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          492 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       492 yIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      ++||||+.+ +|.+++......    .+++..+..++.|++.||.|||++||+|.+|++-
T Consensus        75 ~~~~e~~~~~~L~~~~~~~~~~----~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~  130 (256)
T cd08221          75 LIEMEYANGGTLYDKIVRQKGQ----LFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTL  130 (256)
T ss_pred             EEEEEecCCCcHHHHHHhcccc----CCCHHHHHHHHHHHHHHHHHHHhCCccccCCChH
Confidence            999999987 999999875322    2899999999999999999999999999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.72  E-value=5.2e-17  Score=158.35  Aligned_cols=129  Identities=19%  Similarity=0.269  Sum_probs=112.2

Q ss_pred             ecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeC---
Q 008813          412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL---  488 (552)
Q Consensus       412 i~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~---  488 (552)
                      ..++|++.+.||+|+||.||+|.+..+++.||+|++.........+.+|+.+++++.+|     +||++++++|...   
T Consensus         4 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~~~~h-----~~i~~~~~~~~~~~~~   78 (272)
T cd06637           4 PAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHH-----RNIATYYGAFIKKNPP   78 (272)
T ss_pred             hhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCccHHHHHHHHHHHHHhcCC-----CCeeeEeeEEeecCCC
Confidence            34689999999999999999999999999999999987644456788999999998543     9999999999753   


Q ss_pred             ---CEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          489 ---EHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       489 ---~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                         .++||||||+.+ +|.+++......    .+++..++.++.||+.||.|||+++|+|.+|++
T Consensus        79 ~~~~~~~iv~e~~~~~~L~~~l~~~~~~----~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~  139 (272)
T cd06637          79 GMDDQLWLVMEFCGAGSVTDLIKNTKGN----TLKEEWIAYICREILRGLSHLHQHKVIHRDIKG  139 (272)
T ss_pred             CCCcEEEEEEEcCCCCcHHHHHHhccCC----CCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCH
Confidence               579999999987 999998865432    289999999999999999999999999999985

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.72  E-value=6.5e-17  Score=160.51  Aligned_cols=128  Identities=23%  Similarity=0.269  Sum_probs=113.7

Q ss_pred             ecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC-hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCE
Q 008813          412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND-KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH  490 (552)
Q Consensus       412 i~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s-k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~h  490 (552)
                      +.++|+++++||+|+||.||++++..+++.|++|++... ......+.+|+.+++.++|      +||+++++.+...++
T Consensus        10 ~~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h------~~i~~~~~~~~~~~~   83 (292)
T cd06644          10 PNEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNH------PYIVKLLGAFYWDGK   83 (292)
T ss_pred             cchhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCC------CcEeeeEEEEEeCCe
Confidence            446799999999999999999999999999999999764 3345678899999999998      999999999999999


Q ss_pred             EEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          491 LFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       491 LyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      +|+||||+.+ +|..++.....     .+++..++.++.||+.||.|||+++|+|++|++-
T Consensus        84 ~~lv~e~~~~~~l~~~~~~~~~-----~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~  139 (292)
T cd06644          84 LWIMIEFCPGGAVDAIMLELDR-----GLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAG  139 (292)
T ss_pred             EEEEEecCCCCcHHHHHHhhcC-----CCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcc
Confidence            9999999988 78777765432     2899999999999999999999999999999974

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=99.72  E-value=4.2e-17  Score=178.10  Aligned_cols=129  Identities=16%  Similarity=0.184  Sum_probs=116.2

Q ss_pred             eeeCceecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC---hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeE
Q 008813          406 IILNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLY  482 (552)
Q Consensus       406 v~~gdvi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s---k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~  482 (552)
                      ...+++..+...+...||+|+||+||+|++..   .||||+++..   ....+.+++|+.+|++-+|      .||+-++
T Consensus       384 ~~~WeIp~~ev~l~~rIGsGsFGtV~Rg~whG---dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH------~NIlLFM  454 (678)
T KOG0193|consen  384 LEEWEIPPEEVLLGERIGSGSFGTVYRGRWHG---DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRH------ENILLFM  454 (678)
T ss_pred             ccccccCHHHhhccceeccccccceeeccccc---ceEEEEEecCCCCHHHHHHHHHHHHHHhhcch------hhheeee
Confidence            36677778888999999999999999999974   5999999864   5567889999999999999      8999999


Q ss_pred             eEEEeCCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          483 DYFYHLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       483 d~F~~~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      +++...++ .||+-+|+| +||.+|.-...+     |....++.|++||++||.|||.++|||+|||-
T Consensus       455 G~~~~p~~-AIiTqwCeGsSLY~hlHv~etk-----fdm~~~idIAqQiaqGM~YLHAK~IIHrDLKS  516 (678)
T KOG0193|consen  455 GACMNPPL-AIITQWCEGSSLYTHLHVQETK-----FDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKS  516 (678)
T ss_pred             hhhcCCce-eeeehhccCchhhhhccchhhh-----hhHHHHHHHHHHHHHhhhhhhhhhhhhhhccc
Confidence            99998887 999999999 999999866543     89999999999999999999999999999984

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=99.72  E-value=5.7e-17  Score=164.82  Aligned_cols=117  Identities=17%  Similarity=0.231  Sum_probs=100.6

Q ss_pred             eccCCceEEEEEEECCCCcEEEEEEEecCh----hhHHHHHHHHHHHHHhc--ccCCCCCCCeeEeEeEEEeCCEEEEEE
Q 008813          422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVN--KNDPADEHHILRLYDYFYHLEHLFIVC  495 (552)
Q Consensus       422 LGkG~FG~VykA~Dkktg~~VAVKIIk~sk----~~~~~~lrEIkILk~L~--hhd~~d~pnIVrL~d~F~~~~hLyIVm  495 (552)
                      ||+|+||.||+|++..+++.||||++.+..    ........|..++..+.  +|     |||+++++.|....++||||
T Consensus         1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~-----p~i~~~~~~~~~~~~~~lv~   75 (330)
T cd05586           1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDES-----PFIVGLKFSFQTDSDLYLVT   75 (330)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCC-----CcCcceEEEEecCCeEEEEE
Confidence            799999999999999999999999997532    12234556777777654  33     99999999999999999999


Q ss_pred             ecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          496 ELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       496 Ell~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ||+.+ +|..++.....      +++..++.|+.||+.||.|||++||||+|||+
T Consensus        76 e~~~~g~L~~~l~~~~~------~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp  124 (330)
T cd05586          76 DYMSGGELFWHLQKEGR------FSEDRAKFYIAELVLALEHLHKYDIVYRDLKP  124 (330)
T ss_pred             cCCCCChHHHHHHhcCC------CCHHHHHHHHHHHHHHHHHHHHCCeEeccCCH
Confidence            99977 99998876543      89999999999999999999999999999986

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.72  E-value=6.2e-17  Score=164.45  Aligned_cols=118  Identities=19%  Similarity=0.222  Sum_probs=100.4

Q ss_pred             EEeccCCceEEEEEEECCCCcEEEEEEEecChh----hHHHHHHHHH-HHHHhcccCCCCCCCeeEeEeEEEeCCEEEEE
Q 008813          420 EYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD----FFDQSLDEIK-LLKLVNKNDPADEHHILRLYDYFYHLEHLFIV  494 (552)
Q Consensus       420 e~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~----~~~~~lrEIk-ILk~L~hhd~~d~pnIVrL~d~F~~~~hLyIV  494 (552)
                      +.||+|+||.||+|++..+++.||+|++.....    ....+..|.. +++.++|      +||+++++++...+.+|||
T Consensus         1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h------~~Iv~~~~~~~~~~~~~lv   74 (325)
T cd05602           1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKH------PFLVGLHFSFQTADKLYFV   74 (325)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCC------CCCCceeEEEEcCCeEEEE
Confidence            369999999999999999999999999975321    1223444444 4566777      9999999999999999999


Q ss_pred             EecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          495 CELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       495 mEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      |||+.+ +|.+++.....      +++..++.++.||+.||.|||++||||+|||+
T Consensus        75 ~e~~~~~~L~~~~~~~~~------~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp  124 (325)
T cd05602          75 LDYINGGELFYHLQRERC------FLEPRARFYAAEIASALGYLHSLNIVYRDLKP  124 (325)
T ss_pred             EeCCCCCcHHHHHHhcCC------CCHHHHHHHHHHHHHHHHHHHHCCeEecCCCH
Confidence            999987 89998876543      88999999999999999999999999999996

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.72  E-value=1.1e-16  Score=153.97  Aligned_cols=125  Identities=22%  Similarity=0.226  Sum_probs=112.3

Q ss_pred             ceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC---hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEE
Q 008813          415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL  491 (552)
Q Consensus       415 RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s---k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hL  491 (552)
                      +|++.+.||+|+||.||+|.+..+++.+|||.+...   ......+.+|+.+|+.++|      +||+++++.+...+.+
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~------~~i~~~~~~~~~~~~~   74 (256)
T cd08220           1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSH------PNIIEYYENFLEDKAL   74 (256)
T ss_pred             CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCC------CchhheeeeEecCCEE
Confidence            699999999999999999999999999999998753   2234678899999999998      9999999999999999


Q ss_pred             EEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          492 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       492 yIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ++||||+.+ +|.+++......    ++++..++.++.|++.||.|||++||+|.+|++
T Consensus        75 ~lv~e~~~~~~L~~~~~~~~~~----~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~  129 (256)
T cd08220          75 MIVMEYAPGGTLAEYIQKRCNS----LLDEDTILHFFVQILLALHHVHTKLILHRDLKT  129 (256)
T ss_pred             EEEEecCCCCCHHHHHHHhccc----CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCH
Confidence            999999987 999999875432    289999999999999999999999999999986

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.72  E-value=2.1e-17  Score=170.03  Aligned_cols=120  Identities=18%  Similarity=0.165  Sum_probs=105.6

Q ss_pred             CceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC--hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEE
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL  491 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s--k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hL  491 (552)
                      ..|+++++||+|+||.||+|.+..+++.||||++...  ......+.+|+++|+.++|      +||+++++++...+.+
T Consensus        74 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h------~~iv~~~~~~~~~~~~  147 (353)
T PLN00034         74 SELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNH------PNVVKCHDMFDHNGEI  147 (353)
T ss_pred             HHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCC------CCcceeeeEeccCCeE
Confidence            4577889999999999999999999999999999654  3345678899999999998      9999999999999999


Q ss_pred             EEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          492 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       492 yIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ++||||+.+ +|....          .+++..+..|+.||+.||.|||++||||+|||+
T Consensus       148 ~lv~e~~~~~~L~~~~----------~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp  196 (353)
T PLN00034        148 QVLLEFMDGGSLEGTH----------IADEQFLADVARQILSGIAYLHRRHIVHRDIKP  196 (353)
T ss_pred             EEEEecCCCCcccccc----------cCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCH
Confidence            999999987 775321          157888899999999999999999999999986

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.72  E-value=8.1e-17  Score=159.53  Aligned_cols=118  Identities=22%  Similarity=0.205  Sum_probs=103.3

Q ss_pred             eccCCceEEEEEEECCCCcEEEEEEEecChh----hHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEEEEEEec
Q 008813          422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD----FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCEL  497 (552)
Q Consensus       422 LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~----~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hLyIVmEl  497 (552)
                      ||+|+||.||+++++.+++.||+|++.....    ....+..|+.+++.++|      |||+++++++....++|+||||
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~h------p~i~~~~~~~~~~~~~~lv~e~   74 (277)
T cd05607           1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNS------PFIVNLAYAFESKTHLCLVMSL   74 (277)
T ss_pred             CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCC------CcEEEEEEEEecCCeEEEEEec
Confidence            7999999999999999999999999965311    22345679999999998      9999999999999999999999


Q ss_pred             CCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          498 LRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       498 l~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      +.+ +|..++.......    +++..+..++.||+.||.|||++||+|++|++
T Consensus        75 ~~g~~L~~~~~~~~~~~----~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp  123 (277)
T cd05607          75 MNGGDLKYHIYNVGERG----LEMERVIHYSAQITCGILHLHSMDIVYRDMKP  123 (277)
T ss_pred             CCCCCHHHHHHhccccC----CCHHHHHHHHHHHHHHHHHHHHCCEEEccCCh
Confidence            976 9998887654333    88999999999999999999999999999986

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.72  E-value=9.6e-17  Score=155.38  Aligned_cols=125  Identities=19%  Similarity=0.213  Sum_probs=111.4

Q ss_pred             CceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecCh------hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEe
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK------DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH  487 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk------~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~  487 (552)
                      +.|.+.+.||+|+||.||+|.+..+++.||||+++...      .....+.+|++++++++|      +||+++++++..
T Consensus         2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~------~~i~~~~~~~~~   75 (263)
T cd06625           2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQH------ERIVQYYGCLRD   75 (263)
T ss_pred             CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCC------CCeeeeEEEEcc
Confidence            35889999999999999999999999999999987531      123567889999999998      999999999999


Q ss_pred             CCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          488 LEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       488 ~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      .+.+++|||++.+ +|.++++....      +++..++.++.|++.||.|||++||+|.+|++-
T Consensus        76 ~~~~~~v~e~~~~~~l~~~~~~~~~------~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~  133 (263)
T cd06625          76 DETLSIFMEYMPGGSVKDQLKAYGA------LTETVTRKYTRQILEGVEYLHSNMIVHRDIKGA  133 (263)
T ss_pred             CCeEEEEEEECCCCcHHHHHHHhCC------CCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHH
Confidence            9999999999977 99999886543      899999999999999999999999999999863

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.72  E-value=7.3e-17  Score=156.58  Aligned_cols=125  Identities=17%  Similarity=0.157  Sum_probs=109.1

Q ss_pred             CceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEEEE
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFI  493 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hLyI  493 (552)
                      ..|++.+.||+|+||.||++..+. +..+|+|.++........+.+|+.+|+.++|      |||+++++++...+.++|
T Consensus         4 ~~~~~~~~lg~G~~~~vy~~~~~~-~~~~a~K~~~~~~~~~~~~~~e~~~l~~l~h------~~i~~~~~~~~~~~~~~i   76 (256)
T cd05114           4 SELTFMKELGSGQFGVVHLGKWRA-QIKVAIKAINEGAMSEEDFIEEAKVMMKLSH------PKLVQLYGVCTQQKPLYI   76 (256)
T ss_pred             HHcEEeeEecCCcCceEEEEEecc-CceEEEEecccCCccHHHHHHHHHHHHHCCC------CCceeEEEEEccCCCEEE
Confidence            458889999999999999998754 5679999987654444678899999999998      999999999999999999


Q ss_pred             EEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          494 VCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       494 VmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      ||||+.+ +|.+++.....     .+++..++.++.||+.||.|||+++|+|++|++-
T Consensus        77 v~e~~~~~~L~~~~~~~~~-----~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~  129 (256)
T cd05114          77 VTEFMENGCLLNYLRQRQG-----KLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAAR  129 (256)
T ss_pred             EEEcCCCCcHHHHHHhCcc-----CCCHHHHHHHHHHHHHHHHHHHHCCccccccCcc
Confidence            9999976 99999876432     1899999999999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.72  E-value=3.1e-17  Score=171.29  Aligned_cols=134  Identities=19%  Similarity=0.156  Sum_probs=110.7

Q ss_pred             ecCceEEEEEeccCCceEEEEEEE-----CCCCcEEEEEEEecC--hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeE
Q 008813          412 IAGRYYVTEYLGSAAFSKVFQAQD-----LHTGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDY  484 (552)
Q Consensus       412 i~~RY~Ile~LGkG~FG~VykA~D-----kktg~~VAVKIIk~s--k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~  484 (552)
                      ...+|++.+.||+|+||.||+|.+     ..++..||||+++..  ....+.+.+|+.+|+.+.+|     ||||+++++
T Consensus        33 ~~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~H-----pnIv~l~~~  107 (375)
T cd05104          33 PRNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNH-----INIVNLLGA  107 (375)
T ss_pred             chHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCC-----cceeeeeee
Confidence            346899999999999999999974     345678999999753  22346788999999999433     999999999


Q ss_pred             EEeCCEEEEEEecCCC-CHHHHHHhhccCC--------------------------------------------------
Q 008813          485 FYHLEHLFIVCELLRA-NLYEFQKFNQESG--------------------------------------------------  513 (552)
Q Consensus       485 F~~~~hLyIVmEll~G-sL~d~Lk~~~~~g--------------------------------------------------  513 (552)
                      +...++.++|||||.+ +|.++++......                                                  
T Consensus       108 ~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  187 (375)
T cd05104         108 CTVGGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRR  187 (375)
T ss_pred             eccCCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCccccccccccccc
Confidence            9999999999999987 9999997543100                                                  


Q ss_pred             -------------------CCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          514 -------------------GEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       514 -------------------~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                                         ...++++..+..|+.||+.||.|||+++|||+|||+-
T Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~  243 (375)
T cd05104         188 SVRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAAR  243 (375)
T ss_pred             ccccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchh
Confidence                               0124788899999999999999999999999999974

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.72  E-value=4.2e-17  Score=158.11  Aligned_cols=123  Identities=19%  Similarity=0.241  Sum_probs=111.7

Q ss_pred             ceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecCh----hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCE
Q 008813          415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH  490 (552)
Q Consensus       415 RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk----~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~h  490 (552)
                      +|++.+.||.|+||.||+|.+..+++.||+|++....    ...+.+.+|++++++++|      |||+++++.+....+
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h------~~i~~~~~~~~~~~~   74 (258)
T cd05578           1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNH------PFLVNLWYSFQDEEN   74 (258)
T ss_pred             CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCC------CChHHHHHhhcCCCe
Confidence            5899999999999999999999999999999997532    345678899999999998      999999999999999


Q ss_pred             EEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          491 LFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       491 LyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      +|+||||+.+ +|.+++.....      +++..++.|+.||++||.|||.++|+|.+|++
T Consensus        75 ~~lv~e~~~~~~L~~~l~~~~~------l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~  128 (258)
T cd05578          75 MYLVVDLLLGGDLRYHLSQKVK------FSEEQVKFWICEIVLALEYLHSKGIIHRDIKP  128 (258)
T ss_pred             EEEEEeCCCCCCHHHHHHhcCC------cCHHHHHHHHHHHHHHHHHHHhCCeeccCCCH
Confidence            9999999987 99999887532      89999999999999999999999999999985

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.72  E-value=1.4e-16  Score=154.16  Aligned_cols=128  Identities=22%  Similarity=0.220  Sum_probs=112.7

Q ss_pred             CceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC----hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCC
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND----KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE  489 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s----k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~  489 (552)
                      ++|++.+.||+|+||.||+|.+..+++.||+|.++..    ......+.+|++++++++|      +||+++++++...+
T Consensus         2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~------~~i~~~~~~~~~~~   75 (267)
T cd08224           2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDH------PNVIKYLASFIENN   75 (267)
T ss_pred             CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCC------CCeeeeeeeeecCC
Confidence            5799999999999999999999999999999988642    2235678899999999998      99999999999999


Q ss_pred             EEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          490 HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       490 hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ..++||||+.+ +|..++.......  ..+++..++.++.||+.||.|||++||+|.+|++
T Consensus        76 ~~~lv~e~~~~~~L~~~l~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p  134 (267)
T cd08224          76 ELNIVLELADAGDLSRMIKHFKKQK--RLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKP  134 (267)
T ss_pred             eEEEEEecCCCCCHHHHHHHhcccC--CCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcCh
Confidence            99999999987 9999987543211  2389999999999999999999999999999986

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.72  E-value=1.1e-16  Score=172.86  Aligned_cols=130  Identities=15%  Similarity=0.096  Sum_probs=111.9

Q ss_pred             cCceEEEEEeccCCceEEEEEEECCC-CcEEEEEEEecC-hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCE
Q 008813          413 AGRYYVTEYLGSAAFSKVFQAQDLHT-GVDVCLKIIKND-KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH  490 (552)
Q Consensus       413 ~~RY~Ile~LGkG~FG~VykA~Dkkt-g~~VAVKIIk~s-k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~h  490 (552)
                      ...|.+.+.||+|+||.||+|.+..+ ++.||+|.+... ......+.+|+.+|+.++|      ||||+++++|...++
T Consensus        66 ~~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~H------pniv~~~~~~~~~~~  139 (478)
T PTZ00267         66 EHMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDH------FGIVKHFDDFKSDDK  139 (478)
T ss_pred             ceeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCC------CCEeEEEEEEEECCE
Confidence            45699999999999999999998877 788999987654 2333567789999999998      999999999999999


Q ss_pred             EEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          491 LFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       491 LyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      +||||||+.+ +|.++++.....  ..++++..+..++.||+.||.|||+++|||+|||+-
T Consensus       140 ~~lv~E~~~gg~L~~~l~~~~~~--~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~  198 (478)
T PTZ00267        140 LLLIMEYGSGGDLNKQIKQRLKE--HLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSA  198 (478)
T ss_pred             EEEEEECCCCCCHHHHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHH
Confidence            9999999976 999988754321  134899999999999999999999999999999973

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.72  E-value=6.2e-17  Score=158.55  Aligned_cols=128  Identities=19%  Similarity=0.216  Sum_probs=109.3

Q ss_pred             eecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCE
Q 008813          411 VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH  490 (552)
Q Consensus       411 vi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~h  490 (552)
                      +..++|++.++||+|+||.||+|.+..+. .||||+++......+.+.+|+.+++.++|      +||+++++.+. ...
T Consensus         3 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~~-~valK~~~~~~~~~~~~~~E~~~l~~l~~------~~i~~~~~~~~-~~~   74 (262)
T cd05071           3 IPRESLRLEVKLGQGCFGEVWMGTWNGTT-RVAIKTLKPGTMSPEAFLQEAQVMKKLRH------EKLVQLYAVVS-EEP   74 (262)
T ss_pred             CChHHeeEeeecCCCCCCcEEEEEecCCc-eEEEEecccCccCHHHHHHHHHHHHhCCC------CCcceEEEEEC-CCC
Confidence            34578999999999999999999887654 59999998654444678899999999998      99999998874 456


Q ss_pred             EEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          491 LFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       491 LyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      .++||||+.+ +|.++++.....    .+++..++.++.|++.||.|||+++|+|++|++-
T Consensus        75 ~~lv~e~~~~~~L~~~~~~~~~~----~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~  131 (262)
T cd05071          75 IYIVTEYMSKGSLLDFLKGEMGK----YLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAA  131 (262)
T ss_pred             cEEEEEcCCCCcHHHHHhhcccc----CCCHHHHHHHHHHHHHHHHHHHHCCccccccCcc
Confidence            8999999987 999999864322    2789999999999999999999999999999974

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.72  E-value=7.4e-17  Score=157.80  Aligned_cols=126  Identities=16%  Similarity=0.159  Sum_probs=109.8

Q ss_pred             CceEEEEEeccCCceEEEEEEECCCC---cEEEEEEEecC--hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeC
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLHTG---VDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL  488 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkktg---~~VAVKIIk~s--k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~  488 (552)
                      .+|++.+.||+|+||.||+|.++.++   ..+|+|.++..  ......+.+|+.+++.++|      |||+++++++...
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h------~~i~~~~~~~~~~   77 (267)
T cd05066           4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDH------PNIIHLEGVVTKS   77 (267)
T ss_pred             HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCC------CCcceEEEEEecC
Confidence            57999999999999999999986544   36999998753  2334678899999999998      9999999999999


Q ss_pred             CEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          489 EHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       489 ~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      +.+|+||||+.+ +|.+++.....     .+++..+..|+.||+.||.|||+++|+|++|++-
T Consensus        78 ~~~~lv~e~~~~~~L~~~~~~~~~-----~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~  135 (267)
T cd05066          78 KPVMIVTEYMENGSLDAFLRKHDG-----QFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAAR  135 (267)
T ss_pred             CccEEEEEcCCCCCHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchh
Confidence            999999999986 99999986542     2899999999999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.72  E-value=1.1e-16  Score=158.72  Aligned_cols=127  Identities=21%  Similarity=0.222  Sum_probs=112.0

Q ss_pred             CceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC---hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCE
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH  490 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s---k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~h  490 (552)
                      ++|++.+.||+|++|.||+|.+..+++.||||+++..   ......+.+|+++++.++|      +||+++++++....+
T Consensus         2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h------~~i~~~~~~~~~~~~   75 (294)
T PLN00009          2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH------GNIVRLQDVVHSEKR   75 (294)
T ss_pred             CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccC------CCEeeEEEEEecCCe
Confidence            5799999999999999999999999999999998653   2233567889999999998      999999999999999


Q ss_pred             EEEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          491 LFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       491 LyIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      .|+||||++++|.+++......    .+++..++.++.||+.||.|||+++|+|++|++-
T Consensus        76 ~~lv~e~~~~~l~~~~~~~~~~----~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~  131 (294)
T PLN00009         76 LYLVFEYLDLDLKKHMDSSPDF----AKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQ  131 (294)
T ss_pred             EEEEEecccccHHHHHHhCCCC----CcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcc
Confidence            9999999998999988765432    2688999999999999999999999999999863

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.72  E-value=9.4e-17  Score=156.26  Aligned_cols=128  Identities=18%  Similarity=0.167  Sum_probs=112.0

Q ss_pred             ecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEE
Q 008813          412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL  491 (552)
Q Consensus       412 i~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hL  491 (552)
                      ...+|++.+.||+|+||.||+|.+.. ++.||||.++......+.+.+|+.++++++|      +||+++++++...+.+
T Consensus         4 ~~~~~~~~~~lg~g~~~~v~~~~~~~-~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h------~~i~~~~~~~~~~~~~   76 (261)
T cd05068           4 DRTSIQLLRKLGAGQFGEVWEGLWNN-TTPVAVKTLKPGTMDPKDFLAEAQIMKKLRH------PKLIQLYAVCTLEEPI   76 (261)
T ss_pred             chhheeeEEEecccCCccEEEEEecC-CeEEEEEeeCCCcccHHHHHHHHHHHHHCCC------CCccceeEEEecCCCe
Confidence            44679999999999999999998754 5789999998654445678899999999998      9999999999999999


Q ss_pred             EEEEecCC-CCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          492 FIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       492 yIVmEll~-GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      |+|||++. ++|.++++.....    .+++..+..++.|++.||.|||++||+|.+|++-
T Consensus        77 ~lv~e~~~~~~L~~~~~~~~~~----~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~  132 (261)
T cd05068          77 YIVTELMKYGSLLEYLQGGAGR----ALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAAR  132 (261)
T ss_pred             eeeeecccCCcHHHHHhccCCC----CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcc
Confidence            99999995 4999999865422    2899999999999999999999999999999974

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.72  E-value=1.2e-16  Score=157.22  Aligned_cols=132  Identities=17%  Similarity=0.245  Sum_probs=110.7

Q ss_pred             eecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEE----
Q 008813          411 VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFY----  486 (552)
Q Consensus       411 vi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~----  486 (552)
                      ...++|++++.||+|+||.||+|.+..+++.+|+|++.........+.+|+.+++.+..|     +||+++++++.    
T Consensus        15 ~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~e~~~l~~l~~h-----~~i~~~~~~~~~~~~   89 (286)
T cd06638          15 DPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHDIDEEIEAEYNILKALSDH-----PNVVKFYGMYYKKDV   89 (286)
T ss_pred             CcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccccchHHHHHHHHHHHHHHhcC-----CCeeeeeeeeeeccc
Confidence            355789999999999999999999999999999999876433345678899999999532     99999999884    


Q ss_pred             -eCCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          487 -HLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       487 -~~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                       ..+.+++||||+.+ +|.+++.......  ..+++..++.++.|++.||.|||+++|+|++|++
T Consensus        90 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp  152 (286)
T cd06638          90 KNGDQLWLVLELCNGGSVTDLVKGFLKRG--ERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKG  152 (286)
T ss_pred             CCCCeEEEEEeecCCCCHHHHHHHhhccC--ccccHHHHHHHHHHHHHHHHHHHhCCccccCCCH
Confidence             34679999999987 9999886432211  2388999999999999999999999999999985

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.72  E-value=1.1e-16  Score=155.24  Aligned_cols=129  Identities=18%  Similarity=0.189  Sum_probs=113.6

Q ss_pred             eecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCE
Q 008813          411 VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH  490 (552)
Q Consensus       411 vi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~h  490 (552)
                      +..++|++.+.||+|+||.||+|.+. .++.||||.+.......+.+.+|+.+++.++|      +||+++++++.....
T Consensus         3 ~~~~~~~i~~~ig~g~~~~v~~~~~~-~~~~~~vK~~~~~~~~~~~~~~e~~~l~~l~h------~~i~~~~~~~~~~~~   75 (261)
T cd05034           3 IPRESLKLERKLGAGQFGEVWMGTWN-GTTKVAVKTLKPGTMSPEAFLQEAQIMKKLRH------DKLVQLYAVCSEEEP   75 (261)
T ss_pred             cchhheeeeeeeccCcceEEEEEEEc-CCceEEEEEecCCccCHHHHHHHHHHHhhCCC------CCEeeeeeeeecCCc
Confidence            45678999999999999999999875 45779999998654445678899999999998      999999999999899


Q ss_pred             EEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          491 LFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       491 LyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      +++|||++.+ +|.+++.......    +++..++.++.||+.||.|||+++|+|.+|++-
T Consensus        76 ~~~v~e~~~~~~L~~~i~~~~~~~----~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~  132 (261)
T cd05034          76 IYIVTEYMSKGSLLDFLKSGEGKK----LRLPQLVDMAAQIAEGMAYLESRNYIHRDLAAR  132 (261)
T ss_pred             eEEEEeccCCCCHHHHHhccccCC----CCHHHHHHHHHHHHHHHHHHHhCCcccCCcchh
Confidence            9999999987 9999998754322    899999999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.72  E-value=1.4e-16  Score=156.29  Aligned_cols=128  Identities=17%  Similarity=0.149  Sum_probs=107.3

Q ss_pred             ceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecCh--hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEEE
Q 008813          415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLF  492 (552)
Q Consensus       415 RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk--~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hLy  492 (552)
                      .|++++.||+|+||.||++.+..+++.||||+++...  .....+..|+.++.+..+|     +||+++++++...+.+|
T Consensus         2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~-----~~iv~~~~~~~~~~~~~   76 (283)
T cd06617           2 DLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDC-----PYTVTFYGALFREGDVW   76 (283)
T ss_pred             CceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCC-----CCeeeeeEEEecCCcEE
Confidence            6899999999999999999999999999999997642  2234556677764444333     99999999999999999


Q ss_pred             EEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhC-CCeeeeccc
Q 008813          493 IVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLL-LVIYFILFC  549 (552)
Q Consensus       493 IVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~-gIIH~~L~~  549 (552)
                      +||||++++|.+++.......  ..+++..++.++.||+.||.|||++ +|+|++|++
T Consensus        77 lv~e~~~~~l~~~l~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp  132 (283)
T cd06617          77 ICMEVMDTSLDKFYKKVYDKG--LTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKP  132 (283)
T ss_pred             EEhhhhcccHHHHHHHhccCC--CCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCH
Confidence            999999999999887643222  2389999999999999999999997 999999986

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.72  E-value=1.5e-16  Score=153.69  Aligned_cols=126  Identities=15%  Similarity=0.175  Sum_probs=112.0

Q ss_pred             ceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC---hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEE
Q 008813          415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL  491 (552)
Q Consensus       415 RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s---k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hL  491 (552)
                      ||++++.||+|+||.||++.+..+++.||||.+...   ......+.+|+.+++.++|      +||+++++++...++.
T Consensus         1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~------~~i~~~~~~~~~~~~~   74 (256)
T cd08218           1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKH------PNIVQYQESFEENGNL   74 (256)
T ss_pred             CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCC------CCeeeeEeeecCCCeE
Confidence            699999999999999999999999999999998753   2334578899999999998      9999999999999999


Q ss_pred             EEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          492 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       492 yIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      |+||||+.+ +|.+++.......    +++..++.++.||+.||.|||+++|+|.+|++-
T Consensus        75 ~lv~e~~~~~~l~~~~~~~~~~~----~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~  130 (256)
T cd08218          75 YIVMDYCEGGDLYKKINAQRGVL----FPEDQILDWFVQICLALKHVHDRKILHRDIKSQ  130 (256)
T ss_pred             EEEEecCCCCcHHHHHHhccCCC----CCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHH
Confidence            999999976 9999987654322    789999999999999999999999999999863

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.71  E-value=6.4e-17  Score=176.81  Aligned_cols=127  Identities=18%  Similarity=0.262  Sum_probs=115.9

Q ss_pred             eecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC---hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEe
Q 008813          411 VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH  487 (552)
Q Consensus       411 vi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s---k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~  487 (552)
                      .-.+.|.+...||+|.|+.|.++.+..++..||||+|.+.   ...+....+|+++|+.|+|      ||||+++.+...
T Consensus        53 ~~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~H------PnIvkl~~v~~t  126 (596)
T KOG0586|consen   53 NSVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNH------PNIVKLFSVIET  126 (596)
T ss_pred             ccccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCC------cceeeeeeeeee
Confidence            3446799999999999999999999999999999999874   3344568899999999999      999999999999


Q ss_pred             CCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          488 LEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       488 ~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      +..+|+||||+.+ .+++++..+..      +.+..++.++.|++.|++|||+++|||+|||+
T Consensus       127 ~~~lylV~eya~~ge~~~yl~~~gr------~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~  183 (596)
T KOG0586|consen  127 EATLYLVMEYASGGELFDYLVKHGR------MKEKEARAKFRQIVSAVEYCHSKNIVHRDLKA  183 (596)
T ss_pred             cceeEEEEEeccCchhHHHHHhccc------chhhhhhhhhHHHHHHHHHHhhcceeccccch
Confidence            9999999999765 99999998876      67899999999999999999999999999996

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.71  E-value=1.2e-16  Score=154.34  Aligned_cols=124  Identities=22%  Similarity=0.298  Sum_probs=112.8

Q ss_pred             ceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChh---hHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEE
Q 008813          415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD---FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL  491 (552)
Q Consensus       415 RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~---~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hL  491 (552)
                      ||.+.+.||+|+||.||++.+..+++.||||+++....   ....+.+|+.+++.++|      +||+++++.+...+.+
T Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~------~~i~~~~~~~~~~~~~   74 (264)
T cd06626           1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKH------PNLVKYYGVEVHREKV   74 (264)
T ss_pred             CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCC------CChhheeeeEecCCEE
Confidence            79999999999999999999998999999999986533   56788999999999998      9999999999999999


Q ss_pred             EEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          492 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       492 yIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      ++|+||+.+ +|.+++.....      +++..++.|+.|++.||.|||+++|+|.+|++-
T Consensus        75 ~lv~e~~~~~~L~~~~~~~~~------~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~  128 (264)
T cd06626          75 YIFMEYCSGGTLEELLEHGRI------LDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPA  128 (264)
T ss_pred             EEEEecCCCCcHHHHHhhcCC------CChHHHHHHHHHHHHHHHHHHHCCcccCCCCHH
Confidence            999999987 99999886542      789999999999999999999999999999863

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.71  E-value=9.6e-17  Score=154.27  Aligned_cols=123  Identities=20%  Similarity=0.221  Sum_probs=110.8

Q ss_pred             ceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecCh------hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeC
Q 008813          415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK------DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL  488 (552)
Q Consensus       415 RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk------~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~  488 (552)
                      ||+..+.||+|+||+||+|.+..+++.|++|++....      ...+.+.+|+.+++.++|      +||+++++++...
T Consensus         1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h------~~i~~~~~~~~~~   74 (258)
T cd06632           1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQH------PNIVQYLGTEREE   74 (258)
T ss_pred             CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCC------CCchheeeeEecC
Confidence            6888899999999999999999899999999986532      245678899999999998      9999999999999


Q ss_pred             CEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          489 EHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       489 ~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ..+++||||+.+ +|.+++.....      +++..++.++.||+.||.|||+++|+|.+|++
T Consensus        75 ~~~~lv~e~~~~~~L~~~~~~~~~------~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~  130 (258)
T cd06632          75 DNLYIFLELVPGGSLAKLLKKYGS------FPEPVIRLYTRQILLGLEYLHDRNTVHRDIKG  130 (258)
T ss_pred             CeEEEEEEecCCCcHHHHHHhcCC------CCHHHHHHHHHHHHHHHHHHHHCCcccCCCCH
Confidence            999999999987 99999986542      88999999999999999999999999999986

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.71  E-value=9.9e-17  Score=156.01  Aligned_cols=128  Identities=20%  Similarity=0.220  Sum_probs=110.1

Q ss_pred             eecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCE
Q 008813          411 VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH  490 (552)
Q Consensus       411 vi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~h  490 (552)
                      +..++|+++++||+|+||.||+|... +++.||+|.+.........+.+|+.+++.++|      +||+++++++ ..+.
T Consensus         3 ~~~~~~~~~~~ig~G~~g~v~~~~~~-~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~h------~~i~~~~~~~-~~~~   74 (260)
T cd05067           3 VPRETLKLVKKLGAGQFGEVWMGYYN-GHTKVAIKSLKQGSMSPEAFLAEANLMKQLQH------PRLVRLYAVV-TQEP   74 (260)
T ss_pred             cchHHceeeeeeccCccceEEeeecC-CCceEEEEEecCCCCcHHHHHHHHHHHHhcCC------cCeeeEEEEE-ccCC
Confidence            45678999999999999999999865 56789999998655445678899999999998      9999999886 4567


Q ss_pred             EEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          491 LFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       491 LyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      +++|||++.+ +|.+++......    .+++..+..++.|++.||.|||++||+|.+|++-
T Consensus        75 ~~~v~e~~~~~~L~~~~~~~~~~----~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~  131 (260)
T cd05067          75 IYIITEYMENGSLVDFLKTPEGI----KLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAA  131 (260)
T ss_pred             cEEEEEcCCCCCHHHHHHhcCCC----CCCHHHHHHHHHHHHHHHHHHhcCCeecccccHH
Confidence            9999999976 999998765432    2899999999999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.71  E-value=2.5e-17  Score=181.24  Aligned_cols=124  Identities=21%  Similarity=0.250  Sum_probs=114.5

Q ss_pred             CceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChh----hHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCC
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD----FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE  489 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~----~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~  489 (552)
                      +-|++.+.||+|+-|.|.+|++..||+.+|||+|.+...    ....+.+||.||+.|.|      |||++||+.|+.+.
T Consensus        12 GpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~H------pnVl~LydVwe~~~   85 (786)
T KOG0588|consen   12 GPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEH------PNVLRLYDVWENKQ   85 (786)
T ss_pred             cceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcC------CCeeeeeeeeccCc
Confidence            569999999999999999999999999999999987522    33568899999999999      99999999999999


Q ss_pred             EEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          490 HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       490 hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ++|+|.||+.+ .|++++-.++.      |++.++..+++||+.|+.|+|+.+|+|+|||+
T Consensus        86 ~lylvlEyv~gGELFdylv~kG~------l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKp  140 (786)
T KOG0588|consen   86 HLYLVLEYVPGGELFDYLVRKGP------LPEREAAHFFRQILDGVSYCHAFNICHRDLKP  140 (786)
T ss_pred             eEEEEEEecCCchhHHHHHhhCC------CCCHHHHHHHHHHHHHHHHHhhhcceeccCCc
Confidence            99999999987 99999998764      99999999999999999999999999999996

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.71  E-value=1.5e-16  Score=155.02  Aligned_cols=129  Identities=19%  Similarity=0.211  Sum_probs=111.6

Q ss_pred             ceecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCC
Q 008813          410 TVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE  489 (552)
Q Consensus       410 dvi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~  489 (552)
                      .+..++|++.+.||+|+||.||++.+. .+..+|+|+++........+.+|+.+++.++|      +||+++++.+.. .
T Consensus         2 ~~~~~~~~~~~~lg~g~~~~vy~~~~~-~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~------~~i~~~~~~~~~-~   73 (260)
T cd05073           2 EIPRESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGSMSVEAFLAEANVMKTLQH------DKLVKLHAVVTK-E   73 (260)
T ss_pred             cccccceeEEeEecCccceEEEEEEec-CCccEEEEecCCChhHHHHHHHHHHHHHhcCC------CCcceEEEEEcC-C
Confidence            356789999999999999999999865 45569999988765555778899999999998      999999999887 7


Q ss_pred             EEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          490 HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       490 hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      ..++||||+.+ +|.+++......    .+++..+..++.||+.||.|||++||+|++|++-
T Consensus        74 ~~~~v~e~~~~~~L~~~~~~~~~~----~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~  131 (260)
T cd05073          74 PIYIITEFMAKGSLLDFLKSDEGS----KQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAA  131 (260)
T ss_pred             CeEEEEEeCCCCcHHHHHHhCCcc----ccCHHHHHHHHHHHHHHHHHHHhCCccccccCcc
Confidence            88999999976 999999864332    2788999999999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=99.71  E-value=1.3e-16  Score=157.05  Aligned_cols=130  Identities=19%  Similarity=0.258  Sum_probs=113.0

Q ss_pred             ecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEe----
Q 008813          412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH----  487 (552)
Q Consensus       412 i~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~----  487 (552)
                      ..++|++.+.||+|+||.||+|.+..+++.+|+|++.........+.+|+.+++++.+|     +||++++++|..    
T Consensus        14 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~~~~h-----~~i~~~~~~~~~~~~~   88 (282)
T cd06636          14 PAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEEEEIKLEINMLKKYSHH-----RNIATYYGAFIKKSPP   88 (282)
T ss_pred             hhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecChHHHHHHHHHHHHHHHhcCC-----CcEEEEeeehhccccc
Confidence            44789999999999999999999999999999999987655556788999999998544     999999999863    


Q ss_pred             --CCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          488 --LEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       488 --~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                        ..++||||||+.+ +|.++++......    +++..++.++.||+.||.|||+++|+|++|++-
T Consensus        89 ~~~~~~~iv~e~~~~~~L~~~~~~~~~~~----~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~  150 (282)
T cd06636          89 GHDDQLWLVMEFCGAGSVTDLVKNTKGNA----LKEDWIAYICREILRGLAHLHAHKVIHRDIKGQ  150 (282)
T ss_pred             CCCCEEEEEEEeCCCCcHHHHHHHccCCC----CCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHH
Confidence              4689999999987 9999988654322    789999999999999999999999999999863

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.71  E-value=1.2e-16  Score=156.19  Aligned_cols=126  Identities=17%  Similarity=0.161  Sum_probs=110.8

Q ss_pred             CceEEEEEeccCCceEEEEEEECCCCc---EEEEEEEecC--hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeC
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLHTGV---DVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL  488 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkktg~---~VAVKIIk~s--k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~  488 (552)
                      ..|++.+.||+|+||.||+|.+..+++   .||||++...  ......+..|+.+++.++|      |||+++++++...
T Consensus         4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h------~ni~~~~~~~~~~   77 (269)
T cd05065           4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDH------PNIIHLEGVVTKS   77 (269)
T ss_pred             HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCC------cCcceEEEEECCC
Confidence            468999999999999999999876654   6999998753  3345678899999999998      9999999999999


Q ss_pred             CEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          489 EHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       489 ~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      +.+++||||+.+ +|.++++....     .+++..++.++.|++.||.|||++||+|.+|++-
T Consensus        78 ~~~~lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~  135 (269)
T cd05065          78 RPVMIITEFMENGALDSFLRQNDG-----QFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAAR  135 (269)
T ss_pred             CceEEEEecCCCCcHHHHHhhCCC-----CCCHHHHHHHHHHHHHHHHHHHHCCEeecccChh
Confidence            999999999987 89999886542     1899999999999999999999999999999973

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.71  E-value=2.1e-16  Score=158.31  Aligned_cols=124  Identities=19%  Similarity=0.249  Sum_probs=111.5

Q ss_pred             cCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecCh-hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEE
Q 008813          413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK-DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL  491 (552)
Q Consensus       413 ~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk-~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hL  491 (552)
                      ..+|++++.||+|+||.||++.+..+++.||+|.+.... ...+.+.+|+.+++.+.|      +||+++++.|....++
T Consensus        19 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h------~~v~~~~~~~~~~~~~   92 (296)
T cd06654          19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKN------PNIVNYLDSYLVGDEL   92 (296)
T ss_pred             ccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCC------CCEeeEEEEEEeCCEE
Confidence            468999999999999999999999999999999987642 234567899999999998      9999999999999999


Q ss_pred             EEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          492 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       492 yIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      |+||||+.+ +|.++++...       +++.++..++.|++.||.|||++||+|.+|++
T Consensus        93 ~lv~e~~~~~~L~~~~~~~~-------~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp  144 (296)
T cd06654          93 WVVMEYLAGGSLTDVVTETC-------MDEGQIAAVCRECLQALEFLHSNQVIHRDIKS  144 (296)
T ss_pred             EEeecccCCCCHHHHHHhcC-------CCHHHHHHHHHHHHHHHHHHHHCCcccCCCCH
Confidence            999999987 9999986532       78999999999999999999999999999986

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.71  E-value=1.8e-16  Score=158.82  Aligned_cols=124  Identities=13%  Similarity=0.151  Sum_probs=111.4

Q ss_pred             ceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecCh----hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCE
Q 008813          415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH  490 (552)
Q Consensus       415 RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk----~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~h  490 (552)
                      .|++++.||+|+||.||++.+..+++.||||.+....    .....+.+|+++++.++|      +||+++++.+...++
T Consensus         2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~------~~i~~~~~~~~~~~~   75 (305)
T cd05609           2 DFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAEN------PFVVSMFCSFETKRH   75 (305)
T ss_pred             CceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCC------CCeeeeEEEEecCCE
Confidence            5899999999999999999999999999999987642    234567789999999998      999999999999999


Q ss_pred             EEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          491 LFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       491 LyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      +++||||+.+ +|.++++....      +++..++.++.|++.||.|||+++|+|++|++-
T Consensus        76 ~~lv~e~~~g~~L~~~l~~~~~------~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~  130 (305)
T cd05609          76 LCMVMEYVEGGDCATLLKNIGA------LPVDMARMYFAETVLALEYLHNYGIVHRDLKPD  130 (305)
T ss_pred             EEEEEecCCCCcHHHHHHHcCC------CCHHHHHHHHHHHHHHHHHHHHCCccccCCchH
Confidence            9999999987 99999976542      899999999999999999999999999999863

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.71  E-value=2e-16  Score=152.30  Aligned_cols=124  Identities=17%  Similarity=0.204  Sum_probs=111.4

Q ss_pred             eEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC---hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEEE
Q 008813          416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLF  492 (552)
Q Consensus       416 Y~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s---k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hLy  492 (552)
                      |.+.+.||+|+||.||+|.+..+++.|++|.+...   ......+.+|+++++.++|      +||+++++++...+.+|
T Consensus         2 ~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h------~~i~~~~~~~~~~~~~~   75 (256)
T cd08529           2 FEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDS------SYIIRYYESFLDKGKLN   75 (256)
T ss_pred             ceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCC------CCeehheeeeccCCEEE
Confidence            78889999999999999999999999999998753   3345678899999999998      99999999999999999


Q ss_pred             EEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          493 IVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       493 IVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      +||||+.+ +|.+++......    .+++..+..++.||+.||.|||++||+|.+|++
T Consensus        76 lv~e~~~~~~L~~~l~~~~~~----~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~  129 (256)
T cd08529          76 IVMEYAENGDLHKLLKMQRGR----PLPEDQVWRFFIQILLGLAHLHSKKILHRDIKS  129 (256)
T ss_pred             EEEEeCCCCcHHHHHHHhcCC----CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCc
Confidence            99999976 999999875332    289999999999999999999999999999986

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.71  E-value=8e-17  Score=156.67  Aligned_cols=128  Identities=19%  Similarity=0.213  Sum_probs=109.7

Q ss_pred             eecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCE
Q 008813          411 VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH  490 (552)
Q Consensus       411 vi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~h  490 (552)
                      +..++|++++.||+|+||.||+|.+. .+..+|+|.++......+.+.+|+.++++++|      +||+++++++. ...
T Consensus         3 ~~~~~~~~~~~ig~g~~~~v~~~~~~-~~~~~~~k~~~~~~~~~~~~~~E~~~l~~l~~------~~i~~~~~~~~-~~~   74 (260)
T cd05070           3 IPRESLQLIKKLGNGQFGEVWMGTWN-GNTKVAVKTLKPGTMSPESFLEEAQIMKKLRH------DKLVQLYAVVS-EEP   74 (260)
T ss_pred             CchHHhhhhheeccccCceEEEEEec-CCceeEEEEecCCCCCHHHHHHHHHHHHhcCC------CceEEEEeEEC-CCC
Confidence            45578999999999999999999876 45679999998654444678899999999998      99999999875 566


Q ss_pred             EEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          491 LFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       491 LyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      .++||||+.+ +|.++++......    +++..++.++.|++.||.|||+++|+|++|++-
T Consensus        75 ~~lv~e~~~~~~L~~~~~~~~~~~----~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~  131 (260)
T cd05070          75 IYIVTEYMSKGSLLDFLKDGEGRA----LKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSA  131 (260)
T ss_pred             cEEEEEecCCCcHHHHHHhcCCCC----CCHHHHHHHHHHHHHHHHHHHHCCcccCCCccc
Confidence            8999999987 9999987643322    899999999999999999999999999999974

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.71  E-value=1.7e-16  Score=153.53  Aligned_cols=130  Identities=21%  Similarity=0.250  Sum_probs=112.4

Q ss_pred             cCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCC---
Q 008813          413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE---  489 (552)
Q Consensus       413 ~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~---  489 (552)
                      .+||++.+.||+|+||.||+|.+..+++.+++|++.......+.+.+|+.+++++..|     +||+++++++....   
T Consensus         5 ~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~~~~h-----~~i~~~~~~~~~~~~~~   79 (275)
T cd06608           5 TGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDEEEEIKEEYNILRKYSNH-----PNIATFYGAFIKKNPPG   79 (275)
T ss_pred             hhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCchhHHHHHHHHHHHHHhcCC-----CChheEEEEEEecCCCC
Confidence            4789999999999999999999998999999999987655556788999999999533     99999999997654   


Q ss_pred             ---EEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          490 ---HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       490 ---hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                         ++||||||+.+ +|.+++.......  .++++..++.++.||+.||.|||+++|+|.+|++
T Consensus        80 ~~~~~~lv~e~~~~~~L~~~~~~~~~~~--~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p  141 (275)
T cd06608          80 NDDQLWLVMELCGGGSVTDLVKGLRKKG--KRLKEEWIAYILRETLRGLAYLHENKVIHRDIKG  141 (275)
T ss_pred             cceEEEEEEEcCCCCcHHHHHHHHhhcC--CCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCH
Confidence               59999999987 8999887643111  1289999999999999999999999999999986

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.71  E-value=1.8e-16  Score=159.16  Aligned_cols=126  Identities=18%  Similarity=0.248  Sum_probs=112.4

Q ss_pred             CceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecCh----hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCC
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE  489 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk----~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~  489 (552)
                      .+|++.+.||+|+||.||+|.+..+++.||||.+....    .....+..|+++|+.++|      +||+++++.+....
T Consensus         1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~------~~i~~~~~~~~~~~   74 (316)
T cd05574           1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDH------PFLPTLYASFQTET   74 (316)
T ss_pred             CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCC------CCchhheeeeecCC
Confidence            37999999999999999999999999999999997642    234568899999999998      99999999999999


Q ss_pred             EEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          490 HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       490 hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ++|+||||+.+ +|.++++.....    .+++..++.++.||+.||.|||++||+|.+||+
T Consensus        75 ~~~lv~e~~~~~~L~~~~~~~~~~----~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp  131 (316)
T cd05574          75 YLCLVMDYCPGGELFRLLQRQPGK----CLSEEVARFYAAEVLLALEYLHLLGIVYRDLKP  131 (316)
T ss_pred             EEEEEEEecCCCCHHHHHHhCCCC----ccCHHHHHHHHHHHHHHHHHHHHCCeeccCCCh
Confidence            99999999877 999998864322    289999999999999999999999999999986

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=99.71  E-value=8.8e-17  Score=161.39  Aligned_cols=124  Identities=17%  Similarity=0.227  Sum_probs=103.6

Q ss_pred             EEEeccCCceEEEEEEEC--CCCcEEEEEEEecChhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEe--CCEEEEE
Q 008813          419 TEYLGSAAFSKVFQAQDL--HTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH--LEHLFIV  494 (552)
Q Consensus       419 le~LGkG~FG~VykA~Dk--ktg~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~--~~hLyIV  494 (552)
                      ..+||+|+||.||+|+++  .+++.||||++.... ....+.+|+.+|+.++|      |||++++++|..  ..++|+|
T Consensus         6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~E~~~l~~l~h------~niv~~~~~~~~~~~~~~~lv   78 (317)
T cd07868           6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG-ISMSACREIALLRELKH------PNVISLQKVFLSHADRKVWLL   78 (317)
T ss_pred             ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC-CcHHHHHHHHHHHhcCC------CCCcceeeeEecCCCcEEEEE
Confidence            358999999999999965  467899999997543 23557899999999998      999999999864  4679999


Q ss_pred             EecCCCCHHHHHHhhccC---CCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          495 CELLRANLYEFQKFNQES---GGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       495 mEll~GsL~d~Lk~~~~~---g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      |||++++|.+++......   .....+++..++.|++||+.||.|||++||||+|||+
T Consensus        79 ~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp  136 (317)
T cd07868          79 FDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKP  136 (317)
T ss_pred             EeccCCCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCH
Confidence            999999999988754211   1112389999999999999999999999999999996

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.71  E-value=1.6e-16  Score=156.93  Aligned_cols=119  Identities=18%  Similarity=0.228  Sum_probs=105.8

Q ss_pred             ceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC--hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEEE
Q 008813          415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLF  492 (552)
Q Consensus       415 RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s--k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hLy  492 (552)
                      +|++++.||+|+||.||+|.+..+++.||||++...  ......+.+|++++++++|      |||+++++++...+..+
T Consensus         2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h------~~iv~~~~~~~~~~~~~   75 (279)
T cd06619           2 DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDS------PYIIGFYGAFFVENRIS   75 (279)
T ss_pred             cchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCC------CCeeeEEEEEEECCEEE
Confidence            588899999999999999999999999999999754  2334568899999999998      99999999999999999


Q ss_pred             EEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          493 IVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       493 IVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      +||||+.+ +|..+.    .      +++..+..++.||+.||.|||+++|+|.+|++
T Consensus        76 lv~e~~~~~~l~~~~----~------~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp  123 (279)
T cd06619          76 ICTEFMDGGSLDVYR----K------IPEHVLGRIAVAVVKGLTYLWSLKILHRDVKP  123 (279)
T ss_pred             EEEecCCCCChHHhh----c------CCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCH
Confidence            99999988 665431    1      78899999999999999999999999999985

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>PHA03211 serine/threonine kinase US3; Provisional

Probab=99.71  E-value=1.1e-16  Score=173.48  Aligned_cols=122  Identities=17%  Similarity=0.117  Sum_probs=110.0

Q ss_pred             ecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEE
Q 008813          412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL  491 (552)
Q Consensus       412 i~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hL  491 (552)
                      ...+|.+.+.||+|+||.||+|.+..+++.||||....     ....+|+++|++|+|      +|||++++++...+..
T Consensus       167 ~~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~-----~~~~~E~~iL~~L~H------pnIv~l~~~~~~~~~~  235 (461)
T PHA03211        167 AGLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY-----ASSVHEARLLRRLSH------PAVLALLDVRVVGGLT  235 (461)
T ss_pred             ccCCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc-----cCHHHHHHHHHHCCC------CCCCcEEEEEEECCEE
Confidence            34689999999999999999999999999999996532     345789999999998      9999999999999999


Q ss_pred             EEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          492 FIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       492 yIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      |||||++.++|..++.....     ++++..++.|+.||+.||.|||++||||+|||+
T Consensus       236 ~lv~e~~~~~L~~~l~~~~~-----~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP  288 (461)
T PHA03211        236 CLVLPKYRSDLYTYLGARLR-----PLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKT  288 (461)
T ss_pred             EEEEEccCCCHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCH
Confidence            99999999999999876432     289999999999999999999999999999996

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.71  E-value=1.6e-16  Score=157.43  Aligned_cols=126  Identities=22%  Similarity=0.306  Sum_probs=109.1

Q ss_pred             cCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC---hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCC
Q 008813          413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE  489 (552)
Q Consensus       413 ~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s---k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~  489 (552)
                      .++|++++.||+|+||.||+|.+..+++.||||++...   ......+.+|+++++.++|      |||+++++++...+
T Consensus        11 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h------~~iv~~~~~~~~~~   84 (310)
T cd07865          11 VSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKH------ENVVNLIEICRTKA   84 (310)
T ss_pred             hhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCC------CCccceEEEEeccc
Confidence            36799999999999999999999999999999998653   2233456789999999998      99999999987553


Q ss_pred             --------EEEEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          490 --------HLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       490 --------hLyIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                              ..++||||+.++|.+++.....     .+++..++.++.||+.||.|||++||+|.+|++
T Consensus        85 ~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~-----~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p  147 (310)
T cd07865          85 TPYNRYKGSFYLVFEFCEHDLAGLLSNKNV-----KFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKA  147 (310)
T ss_pred             ccccCCCceEEEEEcCCCcCHHHHHHhccc-----CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCH
Confidence                    4699999999999988876432     289999999999999999999999999999985

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.71  E-value=1.4e-16  Score=154.99  Aligned_cols=124  Identities=17%  Similarity=0.184  Sum_probs=110.4

Q ss_pred             ceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecCh----------hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeE
Q 008813          415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----------DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDY  484 (552)
Q Consensus       415 RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk----------~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~  484 (552)
                      ||.+...||+|+||.||+|.+..+++.||+|.+....          ...+.+.+|+.+++.++|      +||++++++
T Consensus         1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h------~~i~~~~~~   74 (267)
T cd06628           1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQH------ENIVQYLGS   74 (267)
T ss_pred             CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCC------CCeeeEEEE
Confidence            5888899999999999999999899999999886431          123567899999999998      999999999


Q ss_pred             EEeCCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          485 FYHLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       485 F~~~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      +...+++++||||+.+ +|.++++....      +++..++.++.|++.||.|||++||+|.+|++-
T Consensus        75 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~------l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~  135 (267)
T cd06628          75 SLDADHLNIFLEYVPGGSVAALLNNYGA------FEETLVRNFVRQILKGLNYLHNRGIIHRDIKGA  135 (267)
T ss_pred             EEeCCccEEEEEecCCCCHHHHHHhccC------ccHHHHHHHHHHHHHHHHHHHhcCcccccCCHH
Confidence            9999999999999977 99999986543      899999999999999999999999999999863

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.71  E-value=1.3e-16  Score=156.49  Aligned_cols=125  Identities=21%  Similarity=0.271  Sum_probs=110.1

Q ss_pred             CceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC---hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCE
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH  490 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s---k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~h  490 (552)
                      ++|++.+.||+|+||.||+|.+..+++.||||+++..   ....+.+.+|+++++.++|      +||+++++++...+.
T Consensus         1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~------~~i~~~~~~~~~~~~   74 (288)
T cd07833           1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRH------ENIVNLKEAFRRKGR   74 (288)
T ss_pred             CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCC------CCeeehhheEEECCE
Confidence            4799999999999999999999999999999998753   3345678899999999998      999999999999999


Q ss_pred             EEEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          491 LFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       491 LyIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      +++||||+.+++...+..+..     .+++..+..++.||+.||.|||.++|+|++|++
T Consensus        75 ~~iv~e~~~~~~l~~~~~~~~-----~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~  128 (288)
T cd07833          75 LYLVFEYVERTLLELLEASPG-----GLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKP  128 (288)
T ss_pred             EEEEEecCCCCHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCH
Confidence            999999999965555444332     289999999999999999999999999999986

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.71  E-value=2e-16  Score=158.59  Aligned_cols=125  Identities=20%  Similarity=0.239  Sum_probs=112.0

Q ss_pred             ecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecCh-hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCE
Q 008813          412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK-DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH  490 (552)
Q Consensus       412 i~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk-~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~h  490 (552)
                      +..+|.+++.||+|+||.||++.+..+++.||||.+.... ...+.+.+|+.+++.++|      +||++++++|...++
T Consensus        17 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h------~~i~~~~~~~~~~~~   90 (297)
T cd06656          17 PKKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKN------PNIVNYLDSYLVGDE   90 (297)
T ss_pred             hhhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCC------CCEeeEEEEEecCCE
Confidence            3478999999999999999999999999999999997642 234567889999999998      999999999999999


Q ss_pred             EEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          491 LFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       491 LyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      +|+||||+.+ +|.+++....       +++..+..++.|++.||.|||+++|+|++|++
T Consensus        91 ~~lv~e~~~~~~L~~~~~~~~-------~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p  143 (297)
T cd06656          91 LWVVMEYLAGGSLTDVVTETC-------MDEGQIAAVCRECLQALDFLHSNQVIHRDIKS  143 (297)
T ss_pred             EEEeecccCCCCHHHHHHhCC-------CCHHHHHHHHHHHHHHHHHHHHCCcccCCCCH
Confidence            9999999987 9999886532       78999999999999999999999999999986

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.71  E-value=1.5e-16  Score=155.05  Aligned_cols=128  Identities=20%  Similarity=0.241  Sum_probs=109.4

Q ss_pred             eecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCE
Q 008813          411 VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH  490 (552)
Q Consensus       411 vi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~h  490 (552)
                      +..++|.+...||+|+||.||+|.+..+ ..+|+|++.......+.+.+|+++++.++|      +||+++++++. .+.
T Consensus         3 ~~~~~~~~~~~ig~g~~~~v~~~~~~~~-~~~~lK~~~~~~~~~~~~~~E~~~l~~l~h------~~i~~~~~~~~-~~~   74 (260)
T cd05069           3 IPRESLRLDVKLGQGCFGEVWMGTWNGT-TKVAIKTLKPGTMMPEAFLQEAQIMKKLRH------DKLVPLYAVVS-EEP   74 (260)
T ss_pred             CChHHeeeeeeecCcCCCeEEEEEEcCC-ceEEEEEcccCCccHHHHHHHHHHHHhCCC------CCeeeEEEEEc-CCC
Confidence            3457899999999999999999988655 459999987655445678899999999998      99999998875 567


Q ss_pred             EEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          491 LFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       491 LyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      .++||||+.+ +|.++++.....    .+++..+..++.||+.||.|||++||+|.+|++-
T Consensus        75 ~~~v~e~~~~~~L~~~~~~~~~~----~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~  131 (260)
T cd05069          75 IYIVTEFMGKGSLLDFLKEGDGK----YLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAA  131 (260)
T ss_pred             cEEEEEcCCCCCHHHHHhhCCCC----CCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcc
Confidence            8999999987 999999865432    2789999999999999999999999999999974

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.71  E-value=9.1e-17  Score=156.24  Aligned_cols=125  Identities=18%  Similarity=0.164  Sum_probs=109.2

Q ss_pred             CceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEEEE
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFI  493 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hLyI  493 (552)
                      .+|++.+.||+|+||.||++.++ ++..+|||++.........+.+|+.+++.++|      +||+++++++...+++|+
T Consensus         4 ~~~~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~------~~i~~~~~~~~~~~~~~l   76 (256)
T cd05059           4 SELTFLKELGSGQFGVVHLGKWR-GKIDVAIKMIREGAMSEDDFIEEAKVMMKLSH------PNLVQLYGVCTKQRPIFI   76 (256)
T ss_pred             HHcchhhhhccCCCceEEEeEec-CCccEEEEEeccCCCCHHHHHHHHHHHHhCCC------CCEEEEEEEEcCCCceEE
Confidence            35888999999999999999876 46679999987643334567889999999998      999999999999999999


Q ss_pred             EEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          494 VCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       494 VmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      ||||+.+ +|.++++.+..     .+++..++.++.||+.||.|||++||+|++|++-
T Consensus        77 v~e~~~~~~L~~~l~~~~~-----~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~  129 (256)
T cd05059          77 VTEYMANGCLLNYLRERKG-----KLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAAR  129 (256)
T ss_pred             EEecCCCCCHHHHHHhccc-----CCCHHHHHHHHHHHHHHHHHHHHCCcccccccHh
Confidence            9999976 89999986543     2899999999999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.71  E-value=2e-16  Score=155.85  Aligned_cols=125  Identities=18%  Similarity=0.200  Sum_probs=107.6

Q ss_pred             CceEEEEEeccCCceEEEEEE----ECCCCcEEEEEEEecC-hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeC
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQ----DLHTGVDVCLKIIKND-KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL  488 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~----Dkktg~~VAVKIIk~s-k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~  488 (552)
                      .+|++++.||+|+||.||+|.    +..+++.||||.+... ....+.+.+|+++++.++|      +||+++++++...
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h------~~iv~~~~~~~~~   77 (284)
T cd05081           4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQH------DNIVKYKGVCYSA   77 (284)
T ss_pred             ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCC------CCeeEEEEEEccC
Confidence            479999999999999999997    4467889999998764 3334678899999999998      9999999987643


Q ss_pred             --CEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          489 --EHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       489 --~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                        ..+++||||+.+ +|.+++.....     .+++..++.++.||+.||.|||++||+|.+||+
T Consensus        78 ~~~~~~lv~e~~~~~~L~~~l~~~~~-----~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp  136 (284)
T cd05081          78 GRRNLRLVMEYLPYGSLRDYLQKHRE-----RLDHRKLLLYASQICKGMEYLGSKRYVHRDLAT  136 (284)
T ss_pred             CCCceEEEEEecCCCCHHHHHHhcCc-----CCCHHHHHHHHHHHHHHHHHHHHCCceeccCCH
Confidence              568999999976 99999976542     289999999999999999999999999999996

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.70  E-value=7.9e-17  Score=163.54  Aligned_cols=127  Identities=20%  Similarity=0.226  Sum_probs=111.2

Q ss_pred             ecCceEE-EEEeccCCceEEEEEEECCCCcEEEEEEEecChhh---------------HHHHHHHHHHHHHhcccCCCCC
Q 008813          412 IAGRYYV-TEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDF---------------FDQSLDEIKLLKLVNKNDPADE  475 (552)
Q Consensus       412 i~~RY~I-le~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~~---------------~~~~lrEIkILk~L~hhd~~d~  475 (552)
                      +.+||.. .+.||.|+||.||+|.+..+++.||||+++.....               ...+.+|+++++.++|      
T Consensus         6 ~~~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h------   79 (335)
T PTZ00024          6 ISERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKH------   79 (335)
T ss_pred             cccchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCC------
Confidence            5578875 46799999999999999999999999998753211               1246789999999998      


Q ss_pred             CCeeEeEeEEEeCCEEEEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          476 HHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       476 pnIVrL~d~F~~~~hLyIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      +||+++++++...+++|+|||++.++|.++++....      +++..+..++.||+.||.|||++||+|.+|++-
T Consensus        80 ~~iv~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~------~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~  148 (335)
T PTZ00024         80 ENIMGLVDVYVEGDFINLVMDIMASDLKKVVDRKIR------LTESQVKCILLQILNGLNVLHKWYFMHRDLSPA  148 (335)
T ss_pred             cceeeeeEEEecCCcEEEEEeccccCHHHHHHhcCC------CCHHHHHHHHHHHHHHHHHHHhCCeecccccHH
Confidence            999999999999999999999999999999876543      899999999999999999999999999999863

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.70  E-value=1.7e-16  Score=154.86  Aligned_cols=126  Identities=17%  Similarity=0.194  Sum_probs=110.0

Q ss_pred             CceEEEEEeccCCceEEEEEEECCC---CcEEEEEEEecC--hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeC
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLHT---GVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL  488 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkkt---g~~VAVKIIk~s--k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~  488 (552)
                      ++|.+.+.||+|+||.||+|.+..+   ...||||+++..  ......+.+|+.+++.++|      +||+++++.+...
T Consensus         4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h------~~i~~~~~~~~~~   77 (266)
T cd05033           4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDH------PNIIRLEGVVTKS   77 (266)
T ss_pred             HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCC------CCcceEeEEEecC
Confidence            5699999999999999999998644   457999998754  2234567889999999998      9999999999999


Q ss_pred             CEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          489 EHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       489 ~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      +.+++||||+.+ +|.+++.....     .+++..+..++.|++.||.|||+++|+|.+|++-
T Consensus        78 ~~~~iv~e~~~~~~L~~~~~~~~~-----~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~  135 (266)
T cd05033          78 RPVMIITEYMENGSLDKFLRENDG-----KFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAAR  135 (266)
T ss_pred             CceEEEEEcCCCCCHHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcc
Confidence            999999999987 99999986543     2899999999999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.70  E-value=1.1e-16  Score=158.81  Aligned_cols=129  Identities=20%  Similarity=0.306  Sum_probs=112.1

Q ss_pred             ceecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC---hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEE
Q 008813          410 TVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFY  486 (552)
Q Consensus       410 dvi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s---k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~  486 (552)
                      .+..++|++.+.||+|+||.||+|.++.+++.||||+++..   ......+.+|+.+++.++|      |||+++++++.
T Consensus         3 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h------~~i~~~~~~~~   76 (302)
T cd07864           3 KRCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNH------RNIVNLKEIVT   76 (302)
T ss_pred             hhhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCC------CCeeeeeheec
Confidence            45567899999999999999999999999999999999753   2233466789999999998      99999999987


Q ss_pred             eCC----------EEEEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          487 HLE----------HLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       487 ~~~----------hLyIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ...          ++||||||++++|..++.....     .+++..++.++.||+.||.|||++||+|.+|++
T Consensus        77 ~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p  144 (302)
T cd07864          77 DKQDALDFKKDKGAFYLVFEYMDHDLMGLLESGLV-----HFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKC  144 (302)
T ss_pred             CcchhhhccccCCcEEEEEcccCccHHHHHhcCCC-----CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCH
Confidence            654          8999999999998888876532     289999999999999999999999999999985

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.70  E-value=8.4e-17  Score=174.57  Aligned_cols=128  Identities=20%  Similarity=0.212  Sum_probs=111.0

Q ss_pred             eecCceEEEEEeccCCceEEEEEEECCCC----cEEEEEEEec----ChhhHHHHHHHHHHHHHhcccCCCCCCCeeEeE
Q 008813          411 VIAGRYYVTEYLGSAAFSKVFQAQDLHTG----VDVCLKIIKN----DKDFFDQSLDEIKLLKLVNKNDPADEHHILRLY  482 (552)
Q Consensus       411 vi~~RY~Ile~LGkG~FG~VykA~Dkktg----~~VAVKIIk~----sk~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~  482 (552)
                      ....+..+.++||+|+||.||+|..+..+    ..||||..+.    .+.....+.+|.++++.++|      ||||++|
T Consensus       154 l~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H------~NVVr~y  227 (474)
T KOG0194|consen  154 LSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNH------PNVVRFY  227 (474)
T ss_pred             EeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCC------CCEEEEE
Confidence            34455666689999999999999876542    2389999885    24556788999999999999      9999999


Q ss_pred             eEEEeCCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          483 DYFYHLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       483 d~F~~~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ++...+..++||||+|.| +|.++|+.++..     ++..+...++.|.+.||+|||++++||+||-+
T Consensus       228 GVa~~~~Pl~ivmEl~~gGsL~~~L~k~~~~-----v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAA  290 (474)
T KOG0194|consen  228 GVAVLEEPLMLVMELCNGGSLDDYLKKNKKS-----LPTLEKLRFCYDAARGLEYLHSKNCIHRDIAA  290 (474)
T ss_pred             EEEcCCCccEEEEEecCCCcHHHHHHhCCCC-----CCHHHHHHHHHHHHhHHHHHHHCCCcchhHhH
Confidence            999999999999999988 999999988752     89999999999999999999999999999853

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.70  E-value=1e-16  Score=156.79  Aligned_cols=131  Identities=15%  Similarity=0.151  Sum_probs=111.3

Q ss_pred             CceEEEEEeccCCceEEEEEEECC-----CCcEEEEEEEecChh--hHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEE
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLH-----TGVDVCLKIIKNDKD--FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFY  486 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkk-----tg~~VAVKIIk~sk~--~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~  486 (552)
                      .+|++++.||+|+||.||+|+.+.     ..+.+|+|++.....  ..+.+.+|+++|++++|      +||+++++++.
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h------~~iv~~~~~~~   78 (275)
T cd05046           5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSH------KNVVRLLGLCR   78 (275)
T ss_pred             HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCC------cceeeeEEEEC
Confidence            579999999999999999999753     346799998875432  45678999999999998      99999999999


Q ss_pred             eCCEEEEEEecCCC-CHHHHHHhhccCCC---CcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          487 HLEHLFIVCELLRA-NLYEFQKFNQESGG---EAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       487 ~~~hLyIVmEll~G-sL~d~Lk~~~~~g~---~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      .....|+||||+.+ +|.+++........   ..++++..+..++.||+.||.|||+++|+|++|++-
T Consensus        79 ~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~  146 (275)
T cd05046          79 EAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLAAR  146 (275)
T ss_pred             CCCcceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccc
Confidence            98999999999986 99999986552110   113899999999999999999999999999999974

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.70  E-value=4.6e-17  Score=157.81  Aligned_cols=128  Identities=20%  Similarity=0.207  Sum_probs=113.3

Q ss_pred             ecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChh-hHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCE
Q 008813          412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD-FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH  490 (552)
Q Consensus       412 i~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~-~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~h  490 (552)
                      ....|+++++||.|+||.||+|.+.. ++.+|+|++..... ....+.+|+.+++.++|      +||+++++++...+.
T Consensus         4 ~~~~y~~~~~ig~g~~~~vy~~~~~~-~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~------~~i~~~~~~~~~~~~   76 (261)
T cd05148           4 PREEFTLERKLGSGYFGEVWEGLWKN-RVRVAIKILKSDDLLKQQDFQKEVQALKRLRH------KHLISLFAVCSVGEP   76 (261)
T ss_pred             cHHHHHHhhhhccCCCccEEEeEecC-CCcEEEEeccccchhhHHHHHHHHHHHhcCCC------cchhheeeeEecCCC
Confidence            34568999999999999999999987 88999999986533 45678899999999998      999999999999999


Q ss_pred             EEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          491 LFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       491 LyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      +++||||+.+ +|.++++......    +++..++.++.||+.||.|||++||+|.+|++-
T Consensus        77 ~~lv~e~~~~~~L~~~~~~~~~~~----~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~  133 (261)
T cd05148          77 VYIITELMEKGSLLAFLRSPEGQV----LPVASLIDMACQVAEGMAYLEEQNSIHRDLAAR  133 (261)
T ss_pred             eEEEEeecccCCHHHHHhcCCCCC----CCHHHHHHHHHHHHHHHHHHHHCCeeccccCcc
Confidence            9999999987 9999998654322    899999999999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.70  E-value=1.1e-16  Score=157.32  Aligned_cols=125  Identities=27%  Similarity=0.330  Sum_probs=111.0

Q ss_pred             ceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC---hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEE
Q 008813          415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL  491 (552)
Q Consensus       415 RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s---k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hL  491 (552)
                      .|++++.||.|+||.||+|++..+++.||||+++..   ......+.+|++++++++|      +||+++++++...+.+
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h------~~i~~~~~~~~~~~~~   74 (284)
T cd07860           1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH------PNIVKLLDVIHTENKL   74 (284)
T ss_pred             CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCC------CCCcchhhhcccCCcE
Confidence            388999999999999999999999999999998753   2233567899999999998      9999999999999999


Q ss_pred             EEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          492 FIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       492 yIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ++||||+.++|..++.......    +++..++.++.||+.||.|||+++|+|.+|++
T Consensus        75 ~~v~e~~~~~l~~~~~~~~~~~----l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p  128 (284)
T cd07860          75 YLVFEFLHQDLKKFMDASPLSG----IPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKP  128 (284)
T ss_pred             EEEeeccccCHHHHHHhCCCCC----CCHHHHHHHHHHHHHHHHHHHHCCeecCCCCH
Confidence            9999999889999887654322    89999999999999999999999999999985

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.70  E-value=1.6e-16  Score=157.19  Aligned_cols=132  Identities=18%  Similarity=0.186  Sum_probs=111.4

Q ss_pred             cCceEEEEEeccCCceEEEEEEECCCC----------------cEEEEEEEecC--hhhHHHHHHHHHHHHHhcccCCCC
Q 008813          413 AGRYYVTEYLGSAAFSKVFQAQDLHTG----------------VDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPAD  474 (552)
Q Consensus       413 ~~RY~Ile~LGkG~FG~VykA~Dkktg----------------~~VAVKIIk~s--k~~~~~~lrEIkILk~L~hhd~~d  474 (552)
                      .++|++++.||+|+||.||+|.+..++                ..||+|++...  ....+.+.+|+++++.++|     
T Consensus         4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~-----   78 (296)
T cd05051           4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSD-----   78 (296)
T ss_pred             hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCC-----
Confidence            368999999999999999999876533                56899998764  3345678899999999998     


Q ss_pred             CCCeeEeEeEEEeCCEEEEEEecCCC-CHHHHHHhhccCC-----CCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecc
Q 008813          475 EHHILRLYDYFYHLEHLFIVCELLRA-NLYEFQKFNQESG-----GEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILF  548 (552)
Q Consensus       475 ~pnIVrL~d~F~~~~hLyIVmEll~G-sL~d~Lk~~~~~g-----~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~  548 (552)
                       +||+++++++...+++++|||++.+ +|.+++.......     ...++++..++.++.||+.||.|||+++|+|++||
T Consensus        79 -~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlk  157 (296)
T cd05051          79 -PNIARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLA  157 (296)
T ss_pred             -CCEeEEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCccccccc
Confidence             9999999999999999999999976 9999998654100     01138999999999999999999999999999999


Q ss_pred             cc
Q 008813          549 CF  550 (552)
Q Consensus       549 ~~  550 (552)
                      +-
T Consensus       158 p~  159 (296)
T cd05051         158 TR  159 (296)
T ss_pred             hh
Confidence            63

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.70  E-value=1.9e-16  Score=155.72  Aligned_cols=134  Identities=16%  Similarity=0.160  Sum_probs=111.0

Q ss_pred             ceecCceEEEEEeccCCceEEEEEEECC-----CCcEEEEEEEecCh--hhHHHHHHHHHHHHHhcccCCCCCCCeeEeE
Q 008813          410 TVIAGRYYVTEYLGSAAFSKVFQAQDLH-----TGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLY  482 (552)
Q Consensus       410 dvi~~RY~Ile~LGkG~FG~VykA~Dkk-----tg~~VAVKIIk~sk--~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~  482 (552)
                      ++..++|++.+.||+|+||.||+|.+..     +++.||||++....  .....+.+|+.+++.++|      +||++++
T Consensus         2 ~~~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~------~~iv~~~   75 (277)
T cd05062           2 EVAREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNC------HHVVRLL   75 (277)
T ss_pred             cccHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCC------CCeeeEE
Confidence            4567889999999999999999998652     35679999986532  234567899999999998      9999999


Q ss_pred             eEEEeCCEEEEEEecCCC-CHHHHHHhhccCC----CCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          483 DYFYHLEHLFIVCELLRA-NLYEFQKFNQESG----GEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       483 d~F~~~~hLyIVmEll~G-sL~d~Lk~~~~~g----~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      +++...++.++||||+.+ +|.++++......    ....++...+..++.|++.||.|||+++|+|++||+
T Consensus        76 ~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp  147 (277)
T cd05062          76 GVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAA  147 (277)
T ss_pred             EEEcCCCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcch
Confidence            999999999999999887 9999987643210    012367888999999999999999999999999986

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.70  E-value=2e-16  Score=158.63  Aligned_cols=126  Identities=21%  Similarity=0.245  Sum_probs=110.4

Q ss_pred             cCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecCh---hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeC-
Q 008813          413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL-  488 (552)
Q Consensus       413 ~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk---~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~-  488 (552)
                      ..+|++.+.||+|+||.||+|.+..+++.||+|+++...   .......+|+.+++.++|      +||+++++++... 
T Consensus         6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h------~~i~~~~~~~~~~~   79 (309)
T cd07845           6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRH------PNIVELKEVVVGKH   79 (309)
T ss_pred             ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCC------CCCcceEEEEecCC
Confidence            467999999999999999999999999999999997532   122346789999999998      9999999999765 


Q ss_pred             -CEEEEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          489 -EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       489 -~hLyIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                       +.+++||||+.++|.+++.....     ++++..++.++.||+.||.|||++||+|++|++
T Consensus        80 ~~~~~lv~e~~~~~l~~~l~~~~~-----~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p  136 (309)
T cd07845          80 LDSIFLVMEYCEQDLASLLDNMPT-----PFSESQVKCLMLQLLRGLQYLHENFIIHRDLKV  136 (309)
T ss_pred             CCeEEEEEecCCCCHHHHHHhccc-----CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCH
Confidence             57999999999999999886542     289999999999999999999999999999986

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=99.70  E-value=1.7e-17  Score=183.53  Aligned_cols=127  Identities=20%  Similarity=0.177  Sum_probs=112.5

Q ss_pred             CceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC--hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeC---
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL---  488 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s--k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~---  488 (552)
                      +-|...+.||+||||.||+++++.+|+.||||.++..  ..-++.+.+|++||++|+|      +|||++++.=...   
T Consensus        13 y~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh------~NIVk~f~iee~~~~~   86 (732)
T KOG4250|consen   13 YLWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNH------PNIVKLFDIEETKFLG   86 (732)
T ss_pred             cceeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCc------hhhhhhcccCCccccC
Confidence            5577888999999999999999999999999999863  3446789999999999998      9999999886544   


Q ss_pred             ---CEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          489 ---EHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       489 ---~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                         ....||||||.+ +|+..|.+..+..|   |++.+++.++..|..||.|||.+||||+|||+
T Consensus        87 ~~~~~~vlvmEyC~gGsL~~~L~~PEN~~G---LpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP  148 (732)
T KOG4250|consen   87 LVTRLPVLVMEYCSGGSLRKVLNSPENAYG---LPESEFLDLLSDLVSALRHLRENGIVHRDLKP  148 (732)
T ss_pred             cccccceEEEeecCCCcHHHHhcCcccccC---CCHHHHHHHHHHHHHHHHHHHHcCceeccCCC
Confidence               357999999987 99999986654433   99999999999999999999999999999997

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.70  E-value=1.6e-16  Score=155.18  Aligned_cols=126  Identities=17%  Similarity=0.170  Sum_probs=109.7

Q ss_pred             CceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEEEE
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFI  493 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hLyI  493 (552)
                      ++|.+++.||+|+||.||++.+.. +..+|||.++........+.+|+.+++.++|      |||+++++++.....+++
T Consensus         4 ~~~~~~~~lg~G~~~~vy~~~~~~-~~~~aik~~~~~~~~~~~~~~e~~~l~~l~h------~~i~~~~~~~~~~~~~~l   76 (256)
T cd05113           4 KDLTFLKELGTGQFGVVKYGKWRG-QYDVAIKMIKEGSMSEDEFIEEAKVMMKLSH------EKLVQLYGVCTKQRPIYI   76 (256)
T ss_pred             HHeEEeeEecCcccceEEEEEecC-CCcEEEEEcCCCcccHHHHHHHHHHHhcCCC------CCeeeEEEEEccCCCcEE
Confidence            469999999999999999997753 4569999988654334678899999999998      999999999999999999


Q ss_pred             EEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccccC
Q 008813          494 VCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCFS  551 (552)
Q Consensus       494 VmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~~  551 (552)
                      ||||+.+ +|.++++....     .+++..++.++.||+.||.|||++||+|.+|++-.
T Consensus        77 v~e~~~~~~l~~~i~~~~~-----~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~n  130 (256)
T cd05113          77 VTEYMSNGCLLNYLREHGK-----RFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARN  130 (256)
T ss_pred             EEEcCCCCcHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcce
Confidence            9999976 89999886543     28999999999999999999999999999999743

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.70  E-value=2e-16  Score=153.16  Aligned_cols=126  Identities=15%  Similarity=0.166  Sum_probs=112.5

Q ss_pred             cCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEEE
Q 008813          413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLF  492 (552)
Q Consensus       413 ~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hLy  492 (552)
                      ...|++.+.||.|+||.||+|...  ++.||||.++......+++.+|+.+++.++|      +||+++++++......+
T Consensus         5 ~~~~~~~~~ig~g~~g~v~~~~~~--~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~~------~~i~~~~~~~~~~~~~~   76 (256)
T cd05039           5 SKELKLGATIGKGEFGDVMLGDYR--GQKVAVKCLKDDSTAAQAFLAEASVMTTLRH------PNLVQLLGVVLQGNPLY   76 (256)
T ss_pred             hhhccceeeeecCCCceEEEEEec--CcEEEEEEeccchhHHHHHHHHHHHHHhcCC------cceeeeEEEEcCCCCeE
Confidence            356899999999999999999874  7889999998765556788999999999998      99999999999999999


Q ss_pred             EEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          493 IVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       493 IVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      +|||++.+ +|.++++.....    .+++..++.++.|++.||.|||+++|+|.+|++-
T Consensus        77 ~v~e~~~~~~L~~~~~~~~~~----~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~  131 (256)
T cd05039          77 IVTEYMAKGSLVDYLRSRGRA----VITLAQQLGFALDVCEGMEYLEEKNFVHRDLAAR  131 (256)
T ss_pred             EEEEecCCCcHHHHHHhcCCC----CCCHHHHHHHHHHHHHHHHHHHhCCccchhcccc
Confidence            99999986 999999876532    2899999999999999999999999999999974

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.70  E-value=1.2e-16  Score=158.28  Aligned_cols=125  Identities=20%  Similarity=0.244  Sum_probs=111.2

Q ss_pred             CceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecCh---hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeC--
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL--  488 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk---~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~--  488 (552)
                      +.|++.+.||.|+||.||+|.+..+++.+|||.++...   .....+.+|+.+++.++|      +||+++++++...  
T Consensus         5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h------~ni~~~~~~~~~~~~   78 (293)
T cd07843           5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQH------PNIVTVKEVVVGSNL   78 (293)
T ss_pred             hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCC------CCEEEEEEEEEecCC
Confidence            46999999999999999999999999999999997542   233456789999999998      9999999999877  


Q ss_pred             CEEEEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          489 EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       489 ~hLyIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      .++||||||+.++|.+++.....     .+++..++.++.||+.||.|||+++|+|.+|++
T Consensus        79 ~~~~lv~e~~~~~L~~~~~~~~~-----~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p  134 (293)
T cd07843          79 DKIYMVMEYVEHDLKSLMETMKQ-----PFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKT  134 (293)
T ss_pred             CcEEEEehhcCcCHHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCH
Confidence            89999999999999999876543     289999999999999999999999999999986

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.70  E-value=8.6e-17  Score=157.92  Aligned_cols=125  Identities=18%  Similarity=0.249  Sum_probs=108.9

Q ss_pred             CceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC---hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCE
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH  490 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s---k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~h  490 (552)
                      ++|++++.||+|+||.||+|.+..+++.||+|++...   ....+.+.+|+++++.++|      +||+++++++...++
T Consensus         1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h------~~i~~~~~~~~~~~~   74 (286)
T cd07846           1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRH------ENLVNLIEVFRRKKR   74 (286)
T ss_pred             CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCC------cchhhHHHhcccCCe
Confidence            4799999999999999999999989999999987643   2234567899999999998      999999999999999


Q ss_pred             EEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          491 LFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       491 LyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      +|+||||+.+ .|..++.....      +++..++.++.||+.||.|||+++|+|.+|++-
T Consensus        75 ~~lv~e~~~~~~l~~~~~~~~~------~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~  129 (286)
T cd07846          75 LYLVFEFVDHTVLDDLEKYPNG------LDESRVRKYLFQILRGIEFCHSHNIIHRDIKPE  129 (286)
T ss_pred             EEEEEecCCccHHHHHHhccCC------CCHHHHHHHHHHHHHHHHHHHHCCccccCCCHH
Confidence            9999999998 56665544322      899999999999999999999999999999863

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=99.70  E-value=2.9e-17  Score=176.85  Aligned_cols=124  Identities=19%  Similarity=0.218  Sum_probs=109.5

Q ss_pred             ceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEEEEE
Q 008813          415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIV  494 (552)
Q Consensus       415 RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hLyIV  494 (552)
                      -+.+++.||+|-||.||+|.+..+ ..||+|.++......+.+++|+.||++|+|      ++||+|++++..++.+|||
T Consensus       207 ~l~l~~~LG~G~FG~V~~g~~~~~-~~vavk~ik~~~m~~~~f~~Ea~iMk~L~H------~~lV~l~gV~~~~~piyIV  279 (468)
T KOG0197|consen  207 ELKLIRELGSGQFGEVWLGKWNGS-TKVAVKTIKEGSMSPEAFLREAQIMKKLRH------EKLVKLYGVCTKQEPIYIV  279 (468)
T ss_pred             HHHHHHHhcCCccceEEEEEEcCC-CcccceEEeccccChhHHHHHHHHHHhCcc------cCeEEEEEEEecCCceEEE
Confidence            356678899999999999998643 479999998765555788899999999999      9999999999999999999


Q ss_pred             EecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          495 CELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       495 mEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ||||.. +|.++|+......    +...+...++.||++||+||+++++||+||-|
T Consensus       280 tE~m~~GsLl~yLr~~~~~~----l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAA  331 (468)
T KOG0197|consen  280 TEYMPKGSLLDYLRTREGGL----LNLPQLLDFAAQIAEGMAYLESKNYIHRDLAA  331 (468)
T ss_pred             EEecccCcHHHHhhhcCCCc----cchHHHHHHHHHHHHHHHHHHhCCccchhhhh
Confidence            999986 9999999843332    89999999999999999999999999999965

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.70  E-value=1.2e-16  Score=155.50  Aligned_cols=128  Identities=23%  Similarity=0.249  Sum_probs=111.6

Q ss_pred             CceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC----hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCC
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND----KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE  489 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s----k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~  489 (552)
                      ++|++.+.||+|+||.||+|++..+++.+|||.+...    ......+.+|+.+++.++|      +||+++++++...+
T Consensus         2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h------~~i~~~~~~~~~~~   75 (267)
T cd08229           2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNH------PNVIKYYASFIEDN   75 (267)
T ss_pred             chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccC------CchhhhhheeEeCC
Confidence            4688899999999999999999999999999988652    2234577899999999998      99999999999999


Q ss_pred             EEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          490 HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       490 hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      .+++||||+.+ +|.++++......  ..+++..++.++.||+.||.|||++||+|.+|++
T Consensus        76 ~~~~v~e~~~~~~L~~~~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p  134 (267)
T cd08229          76 ELNIVLELADAGDLSRMIKHFKKQK--RLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKP  134 (267)
T ss_pred             eEEEEEEecCCCCHHHHHHHhhccC--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCH
Confidence            99999999987 9999987533211  2389999999999999999999999999999985

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=99.70  E-value=2.1e-17  Score=171.90  Aligned_cols=125  Identities=20%  Similarity=0.266  Sum_probs=107.9

Q ss_pred             CceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeC--C--
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL--E--  489 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~--~--  489 (552)
                      -+|.-.+++|.|+||.||+|....+++.||||.+-.++.+.   .+|+.||+.+.|      ||||+|.-+|...  .  
T Consensus        24 i~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~k---nrEl~im~~l~H------pNIV~L~~~f~~~~~~d~   94 (364)
T KOG0658|consen   24 ISYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRYK---NRELQIMRKLDH------PNIVRLLYFFSSSTESDE   94 (364)
T ss_pred             EEEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCcC---cHHHHHHHhcCC------cCeeeEEEEEEecCCCch
Confidence            46888999999999999999999999999999887665533   379999999998      9999999999754  2  


Q ss_pred             -EEEEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          490 -HLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       490 -hLyIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                       ++.+|||||+.+|+++++.....+  ..++.-.++-|+.||++||.|||+.||+|+|||+
T Consensus        95 ~~lnlVleymP~tL~~~~r~~~~~~--~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKP  153 (364)
T KOG0658|consen   95 VYLNLVLEYMPETLYRVIRHYTRAN--QRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKP  153 (364)
T ss_pred             hHHHHHHHhchHHHHHHHHHHhhcC--CCCceeeeHHHHHHHHHHHHHHHhcCcccCCCCh
Confidence             578899999999999999642111  1288999999999999999999999999999997

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.70  E-value=2e-16  Score=162.44  Aligned_cols=126  Identities=24%  Similarity=0.302  Sum_probs=110.3

Q ss_pred             ecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC---hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeC
Q 008813          412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL  488 (552)
Q Consensus       412 i~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s---k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~  488 (552)
                      +.+||++++.||+|+||.||++.+..+++.||||++...   ......+.+|+.+|+.++|      +||+++++++...
T Consensus        13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h------~~iv~~~~~~~~~   86 (343)
T cd07880          13 VPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKH------ENVIGLLDVFTPD   86 (343)
T ss_pred             cccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCC------CCccceeeeecCC
Confidence            567899999999999999999999999999999998643   2234567899999999998      9999999998755


Q ss_pred             C------EEEEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          489 E------HLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       489 ~------hLyIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      .      .+++|||+++++|..+++...       +++..++.++.||+.||.|||++||+|++|++-
T Consensus        87 ~~~~~~~~~~lv~e~~~~~l~~~~~~~~-------l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~  147 (343)
T cd07880          87 LSLDRFHDFYLVMPFMGTDLGKLMKHEK-------LSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPG  147 (343)
T ss_pred             ccccccceEEEEEecCCCCHHHHHhcCC-------CCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHH
Confidence            3      469999999889998887432       899999999999999999999999999999863

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.70  E-value=1.9e-16  Score=154.73  Aligned_cols=124  Identities=18%  Similarity=0.194  Sum_probs=109.8

Q ss_pred             ceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC-----------hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEe
Q 008813          415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND-----------KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYD  483 (552)
Q Consensus       415 RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s-----------k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d  483 (552)
                      +|.+.+.||.|+||.||+|.+..+++.||||.++..           ....+.+.+|+.+++.++|      +||+++++
T Consensus         2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h------~~i~~~~~   75 (272)
T cd06629           2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDH------LNIVQYLG   75 (272)
T ss_pred             ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCC------CCcceEEE
Confidence            688999999999999999999989999999988642           1123467789999999998      99999999


Q ss_pred             EEEeCCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          484 YFYHLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       484 ~F~~~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      ++...+.+++||||+.+ +|.++++....      +++..++.++.||+.||.|||+++|+|.+|++-
T Consensus        76 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~------l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~  137 (272)
T cd06629          76 FETTEEYLSIFLEYVPGGSIGSCLRTYGR------FEEQLVRFFTEQVLEGLAYLHSKGILHRDLKAD  137 (272)
T ss_pred             EeccCCceEEEEecCCCCcHHHHHhhccC------CCHHHHHHHHHHHHHHHHHHhhCCeeecCCChh
Confidence            99999999999999977 99999887532      899999999999999999999999999999863

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.70  E-value=2.4e-16  Score=183.22  Aligned_cols=135  Identities=20%  Similarity=0.168  Sum_probs=115.6

Q ss_pred             eeCceecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC---hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEe
Q 008813          407 ILNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYD  483 (552)
Q Consensus       407 ~~gdvi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s---k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d  483 (552)
                      ..++....+|++++.||+|+||.||+|.+..++..||+|++...   ......+.+|+.+|+.|+|      ||||++++
T Consensus         6 ~~ge~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~H------PNIVrl~d   79 (1021)
T PTZ00266          6 DDGESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKH------KNIVRYID   79 (1021)
T ss_pred             cCCccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCC------CCcCeEEE
Confidence            34566778999999999999999999999999999999999753   3345678899999999998      99999999


Q ss_pred             EEEeC--CEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhC-------CCeeeeccc
Q 008813          484 YFYHL--EHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLL-------LVIYFILFC  549 (552)
Q Consensus       484 ~F~~~--~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~-------gIIH~~L~~  549 (552)
                      +|...  ..+||||||+.+ +|.++|.......  .++++..++.|+.||+.||.|||+.       +|||+|||+
T Consensus        80 ~f~de~~~~lyIVMEY~~gGSL~~lL~k~~~~~--g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKP  153 (1021)
T PTZ00266         80 RFLNKANQKLYILMEFCDAGDLSRNIQKCYKMF--GKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKP  153 (1021)
T ss_pred             EEEecCCCEEEEEEeCCCCCcHHHHHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcH
Confidence            98654  679999999987 9999997643211  2389999999999999999999985       499999996

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.70  E-value=2.5e-16  Score=154.07  Aligned_cols=125  Identities=26%  Similarity=0.271  Sum_probs=107.7

Q ss_pred             eEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChh--hHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeC--CEE
Q 008813          416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD--FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL--EHL  491 (552)
Q Consensus       416 Y~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~--~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~--~hL  491 (552)
                      |++++.||+|+||.||+|.+..+++.||+|+++....  ......+|+.++.++.+|     +||+++++++...  +.+
T Consensus         1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h-----~~i~~~~~~~~~~~~~~~   75 (282)
T cd07831           1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPH-----PNILRLIEVLFDRKTGRL   75 (282)
T ss_pred             CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCC-----CCccceEEEEecCCCCcE
Confidence            6788999999999999999999999999999875321  122345789999988743     9999999999988  899


Q ss_pred             EEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          492 FIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       492 yIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      ++||||+.++|.+++.....     .+++..++.++.||+.||.|||+++|+|++|++-
T Consensus        76 ~lv~e~~~~~l~~~l~~~~~-----~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~  129 (282)
T cd07831          76 ALVFELMDMNLYELIKGRKR-----PLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPE  129 (282)
T ss_pred             EEEEecCCccHHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHHCCceecccCHH
Confidence            99999999999998876432     2899999999999999999999999999999863

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.70  E-value=2.4e-18  Score=174.68  Aligned_cols=129  Identities=24%  Similarity=0.229  Sum_probs=112.1

Q ss_pred             cCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC---hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEe-EEEeC
Q 008813          413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYD-YFYHL  488 (552)
Q Consensus       413 ~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s---k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d-~F~~~  488 (552)
                      ...|+|+++||+|+||.||++++..+|..+|.|.|+-.   ...++....||.+|+.|+|      ||||++|+ .|..+
T Consensus        18 l~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~H------pNIVqYy~~~f~~~   91 (375)
T KOG0591|consen   18 LADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNH------PNIVQYYAHSFIED   91 (375)
T ss_pred             HHHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCC------chHHHHHHHhhhcc
Confidence            35699999999999999999999999999999998743   4456778899999999999      99999999 56655


Q ss_pred             CE-EEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHh--CC--Ceeeeccc
Q 008813          489 EH-LFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFL--LL--VIYFILFC  549 (552)
Q Consensus       489 ~h-LyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs--~g--IIH~~L~~  549 (552)
                      +. ++||||+|++ +|.++|+..+..+  +.++|+.++.++.|++.||..+|.  .+  |+|+|||+
T Consensus        92 ~evlnivmE~c~~GDLsqmIk~~K~qk--r~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKP  156 (375)
T KOG0591|consen   92 NEVLNIVMELCDAGDLSQMIKHFKKQK--RLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKP  156 (375)
T ss_pred             chhhHHHHHhhcccCHHHHHHHHHhcc--ccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcc
Confidence            55 9999999987 9999998655433  349999999999999999999998  45  99999997

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.70  E-value=2e-16  Score=152.25  Aligned_cols=125  Identities=18%  Similarity=0.200  Sum_probs=111.5

Q ss_pred             ceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC---hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEE
Q 008813          415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL  491 (552)
Q Consensus       415 RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s---k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hL  491 (552)
                      ||.+.+.||+|+||.||++.+..++..||+|.+...   ....+.+.+|+.+++.++|      +||+++++.+....++
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h------~~i~~~~~~~~~~~~~   74 (257)
T cd08225           1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKH------PNIVTFFASFQENGRL   74 (257)
T ss_pred             CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCC------CChhhhhheeccCCeE
Confidence            689999999999999999999999999999999753   1234577899999999998      9999999999999999


Q ss_pred             EEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          492 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       492 yIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      |+||||+.+ +|.+++......    .+++..++.++.||+.||.|||+++|+|.+|++
T Consensus        75 ~lv~e~~~~~~L~~~~~~~~~~----~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~  129 (257)
T cd08225          75 FIVMEYCDGGDLMKRINRQRGV----LFSEDQILSWFVQISLGLKHIHDRKILHRDIKS  129 (257)
T ss_pred             EEEEecCCCCcHHHHHHhccCC----CCCHHHHHHHHHHHHHHHHHHHHCCcccccCCH
Confidence            999999977 999998765432    279999999999999999999999999999985

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.70  E-value=1.5e-16  Score=168.91  Aligned_cols=132  Identities=17%  Similarity=0.163  Sum_probs=109.2

Q ss_pred             cCceEEEEEeccCCceEEEEEEECCC-----CcEEEEEEEecC--hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEE
Q 008813          413 AGRYYVTEYLGSAAFSKVFQAQDLHT-----GVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYF  485 (552)
Q Consensus       413 ~~RY~Ile~LGkG~FG~VykA~Dkkt-----g~~VAVKIIk~s--k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F  485 (552)
                      .++|++++.||+|+||.||+|.+...     +..||||+++..  ....+.+.+|+++|+.+..|     ||||++++++
T Consensus        36 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~H-----pnIv~l~~~~  110 (400)
T cd05105          36 RDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPH-----LNIVNLLGAC  110 (400)
T ss_pred             ccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCC-----CCeeeEEEEE
Confidence            46899999999999999999987533     357999999753  23346788999999999733     9999999999


Q ss_pred             EeCCEEEEEEecCCC-CHHHHHHhhccCC---------------------------------------------------
Q 008813          486 YHLEHLFIVCELLRA-NLYEFQKFNQESG---------------------------------------------------  513 (552)
Q Consensus       486 ~~~~hLyIVmEll~G-sL~d~Lk~~~~~g---------------------------------------------------  513 (552)
                      ...+.+|||||||.+ +|.++|..+....                                                   
T Consensus       111 ~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  190 (400)
T cd05105         111 TKSGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVP  190 (400)
T ss_pred             ccCCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccch
Confidence            999999999999987 9999887542100                                                   


Q ss_pred             ---------------------------------------CCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          514 ---------------------------------------GEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       514 ---------------------------------------~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                                                             ....+++..+..++.||+.||.|||+++|||++||+
T Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp  265 (400)
T cd05105         191 MLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKNCVHRDLAA  265 (400)
T ss_pred             hhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCh
Confidence                                                   012378889999999999999999999999999986

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.70  E-value=2.8e-16  Score=152.90  Aligned_cols=123  Identities=14%  Similarity=0.148  Sum_probs=108.5

Q ss_pred             ceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecCh-------hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEe
Q 008813          415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK-------DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH  487 (552)
Q Consensus       415 RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk-------~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~  487 (552)
                      +|++.+.||+|+||.||+|.+ .+++.+|||+++...       ....++.+|+.+|+.++|      +||+++++++..
T Consensus         1 ~~~~~~~ig~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~------~~i~~~~~~~~~   73 (265)
T cd06631           1 EWTKGEVLGKGAYGTVYCGLT-NQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKH------VNIVQYLGTCLD   73 (265)
T ss_pred             CccccceEeccCCeEEEEEEE-cCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCC------CCEeeEeeEeec
Confidence            478899999999999999986 478899999987531       223568899999999998      999999999999


Q ss_pred             CCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          488 LEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       488 ~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      .+.+++||||+.+ +|.+++++...      +++..++.++.||+.||.|||+.+|+|.+|++-
T Consensus        74 ~~~~~lv~e~~~~~~L~~~l~~~~~------~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~  131 (265)
T cd06631          74 DNTISIFMEFVPGGSISSILNRFGP------LPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGN  131 (265)
T ss_pred             CCeEEEEEecCCCCcHHHHHHhcCC------CCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHH
Confidence            9999999999987 99999976542      899999999999999999999999999999874

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=99.70  E-value=4.3e-16  Score=150.36  Aligned_cols=126  Identities=13%  Similarity=0.131  Sum_probs=109.6

Q ss_pred             ceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC---hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEe-CCE
Q 008813          415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH-LEH  490 (552)
Q Consensus       415 RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s---k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~-~~h  490 (552)
                      +|++++.||+|++|.||++.+..+++.||||.+...   ....+.+.+|+++++.++|      +||+++++.+.. ...
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~------~~i~~~~~~~~~~~~~   74 (257)
T cd08223           1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKH------PNIVAYRESWEGEDGL   74 (257)
T ss_pred             CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCC------CCeeeeeeeecCCCCE
Confidence            489999999999999999999999999999999753   2334567889999999998      999999998864 457


Q ss_pred             EEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          491 LFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       491 LyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      +|+|||++.+ +|.++++.....    ++++.+++.++.||+.||.|||++||+|.+|++-
T Consensus        75 ~~lv~e~~~~~~l~~~l~~~~~~----~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~  131 (257)
T cd08223          75 LYIVMGFCEGGDLYHKLKEQKGK----LLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQ  131 (257)
T ss_pred             EEEEecccCCCcHHHHHHHhcCC----CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCch
Confidence            8999999986 999999865432    2899999999999999999999999999999863

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.69  E-value=9.9e-17  Score=164.66  Aligned_cols=135  Identities=19%  Similarity=0.188  Sum_probs=109.7

Q ss_pred             eecCceEEEEEeccCCceEEEEEEEC-----CCCcEEEEEEEecC--hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEe
Q 008813          411 VIAGRYYVTEYLGSAAFSKVFQAQDL-----HTGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYD  483 (552)
Q Consensus       411 vi~~RY~Ile~LGkG~FG~VykA~Dk-----ktg~~VAVKIIk~s--k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d  483 (552)
                      ...+||++.+.||+|+||.||+|.+.     .+++.||||+++..  ......+.+|+.+|.++.||     +||+++++
T Consensus         4 ~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h-----~niv~~~~   78 (343)
T cd05103           4 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH-----LNVVNLLG   78 (343)
T ss_pred             cchhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCC-----ccHhhhcc
Confidence            44579999999999999999999853     45789999999763  22345688999999999665     99999999


Q ss_pred             EEEeC-CEEEEEEecCCC-CHHHHHHhhccCC------------------------------------------------
Q 008813          484 YFYHL-EHLFIVCELLRA-NLYEFQKFNQESG------------------------------------------------  513 (552)
Q Consensus       484 ~F~~~-~hLyIVmEll~G-sL~d~Lk~~~~~g------------------------------------------------  513 (552)
                      ++... ..+++||||+.+ +|.+++..+....                                                
T Consensus        79 ~~~~~~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (343)
T cd05103          79 ACTKPGGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSL  158 (343)
T ss_pred             eeecCCCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCcc
Confidence            88654 568999999987 9999987542100                                                


Q ss_pred             -------------CCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          514 -------------GEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       514 -------------~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                                   ....+++..+..++.||+.||.|||+++|+|++||+-
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~  208 (343)
T cd05103         159 SDVEEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAAR  208 (343)
T ss_pred             ccchhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccC
Confidence                         0013688889999999999999999999999999963

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.69  E-value=4.2e-16  Score=152.00  Aligned_cols=125  Identities=18%  Similarity=0.211  Sum_probs=109.0

Q ss_pred             CceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC------hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEe
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND------KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH  487 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s------k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~  487 (552)
                      ..|++.+.||+|+||.||++.+..+++.||||++...      ......+.+|+.+++.+.|      +||+++++++..
T Consensus         2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h------~~i~~~~~~~~~   75 (265)
T cd06652           2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLH------ERIVQYYGCLRD   75 (265)
T ss_pred             CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCC------CCeeeEEeEecc
Confidence            3589999999999999999999999999999998642      1234577889999999998      999999999876


Q ss_pred             C--CEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          488 L--EHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       488 ~--~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      .  ..+++||||+.+ +|.++++....      +++..++.++.||+.||.|||+++|+|.+|++-
T Consensus        76 ~~~~~~~~v~e~~~~~~L~~~l~~~~~------~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~  135 (265)
T cd06652          76 PMERTLSIFMEHMPGGSIKDQLKSYGA------LTENVTRKYTRQILEGVSYLHSNMIVHRDIKGA  135 (265)
T ss_pred             CCCceEEEEEEecCCCcHHHHHHHcCC------CCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHH
Confidence            4  578999999986 99999886543      789999999999999999999999999999863

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.69  E-value=2.4e-16  Score=155.47  Aligned_cols=125  Identities=19%  Similarity=0.176  Sum_probs=106.6

Q ss_pred             cCce-EEEEEeccCCceEEEEEE----ECCCCcEEEEEEEecCh--hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEE
Q 008813          413 AGRY-YVTEYLGSAAFSKVFQAQ----DLHTGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYF  485 (552)
Q Consensus       413 ~~RY-~Ile~LGkG~FG~VykA~----Dkktg~~VAVKIIk~sk--~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F  485 (552)
                      .+|| ++++.||+|+||+||++.    ...+++.||+|+++...  .....+.+|+.+|+.++|      +||+++++++
T Consensus         2 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h------~~i~~~~~~~   75 (283)
T cd05080           2 HKRYLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYH------ENIVKYKGCC   75 (283)
T ss_pred             ChhhceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCC------CCEeeEEEEE
Confidence            3567 999999999999998865    33567889999997642  244667899999999998      9999999988


Q ss_pred             EeC--CEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          486 YHL--EHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       486 ~~~--~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      ...  ..+++||||+.+ +|.+++....       +++..++.|+.||+.||.|||+++|+|++||+-
T Consensus        76 ~~~~~~~~~lv~e~~~~~~l~~~~~~~~-------l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~  136 (283)
T cd05080          76 SEQGGKGLQLIMEYVPLGSLRDYLPKHK-------LNLAQLLLFAQQICEGMAYLHSQHYIHRDLAAR  136 (283)
T ss_pred             ecCCCceEEEEecCCCCCCHHHHHHHcC-------CCHHHHHHHHHHHHHHHHHHHHCCeeccccChh
Confidence            754  468999999987 8999987643       899999999999999999999999999999974

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.69  E-value=1.8e-16  Score=161.50  Aligned_cols=125  Identities=27%  Similarity=0.371  Sum_probs=109.6

Q ss_pred             ecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC--hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeC-
Q 008813          412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL-  488 (552)
Q Consensus       412 i~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s--k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~-  488 (552)
                      +.++|++.+.||+|+||.||+|.+..+++.||||++...  ......+.+|+.+++.++|      +||+++++++... 
T Consensus         3 ~~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h------~niv~~~~~~~~~~   76 (336)
T cd07849           3 VGPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKH------ENIIGILDIIRPPS   76 (336)
T ss_pred             cccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCC------CCcCchhheeeccc
Confidence            347899999999999999999999999999999998642  2344567889999999998      9999999987644 


Q ss_pred             ----CEEEEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          489 ----EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       489 ----~hLyIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                          .++|+|||++.++|..+++...       +++..++.++.||+.||.|||++||||++|++
T Consensus        77 ~~~~~~~~lv~e~~~~~l~~~~~~~~-------l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp  134 (336)
T cd07849          77 FESFNDVYIVQELMETDLYKLIKTQH-------LSNDHIQYFLYQILRGLKYIHSANVLHRDLKP  134 (336)
T ss_pred             ccccceEEEEehhcccCHHHHHhcCC-------CCHHHHHHHHHHHHHHHHHHHhCCeeccCCCH
Confidence                4689999999999998886532       89999999999999999999999999999986

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.69  E-value=3.3e-16  Score=155.51  Aligned_cols=135  Identities=16%  Similarity=0.163  Sum_probs=110.1

Q ss_pred             ceecCceEEEEEeccCCceEEEEEEECC-----CCcEEEEEEEecCh--hhHHHHHHHHHHHHHhcccCCCCCCCeeEeE
Q 008813          410 TVIAGRYYVTEYLGSAAFSKVFQAQDLH-----TGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLY  482 (552)
Q Consensus       410 dvi~~RY~Ile~LGkG~FG~VykA~Dkk-----tg~~VAVKIIk~sk--~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~  482 (552)
                      ++..+||++.+.||+|+||.||+|.++.     .+..||+|+++...  .....+.+|+.+++.++|      +||++++
T Consensus         2 ~~~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~------~~i~~~~   75 (288)
T cd05061           2 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTC------HHVVRLL   75 (288)
T ss_pred             cccHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCC------CCeeeEE
Confidence            3456799999999999999999997542     34589999887542  223457789999999998      9999999


Q ss_pred             eEEEeCCEEEEEEecCCC-CHHHHHHhhccC----CCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          483 DYFYHLEHLFIVCELLRA-NLYEFQKFNQES----GGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       483 d~F~~~~hLyIVmEll~G-sL~d~Lk~~~~~----g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      +++......|+||||+.+ +|.++++.....    .+..+++...+..++.||+.||.|||+++|+|++||+-
T Consensus        76 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~  148 (288)
T cd05061          76 GVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAAR  148 (288)
T ss_pred             EEEcCCCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChh
Confidence            999999999999999976 999999864311    01123577889999999999999999999999999963

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.69  E-value=3e-16  Score=157.42  Aligned_cols=128  Identities=12%  Similarity=0.136  Sum_probs=113.4

Q ss_pred             eecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC----hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEE
Q 008813          411 VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND----KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFY  486 (552)
Q Consensus       411 vi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s----k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~  486 (552)
                      .+..+|.+.+.||+|+||.||++.+..+++.||||++...    ....+.+.+|+.+++.++|      +||+++++++.
T Consensus        12 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h------~niv~~~~~~~   85 (307)
T cd06607          12 DPEKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRH------PNTIEYKGCYL   85 (307)
T ss_pred             CcchhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCC------CCEEEEEEEEE
Confidence            4557899999999999999999999989999999998643    2234568899999999998      99999999999


Q ss_pred             eCCEEEEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          487 HLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       487 ~~~hLyIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ..+..||||||+.++|.+++.....     ++++..+..++.||+.||.|||+++|+|.+|++
T Consensus        86 ~~~~~~lv~e~~~g~l~~~~~~~~~-----~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p  143 (307)
T cd06607          86 REHTAWLVMEYCLGSASDILEVHKK-----PLQEVEIAAICHGALQGLAYLHSHERIHRDIKA  143 (307)
T ss_pred             eCCeEEEEHHhhCCCHHHHHHHccc-----CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCc
Confidence            9999999999999999888775442     289999999999999999999999999999986

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.69  E-value=2.6e-16  Score=151.46  Aligned_cols=125  Identities=21%  Similarity=0.285  Sum_probs=113.5

Q ss_pred             CceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEEEE
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFI  493 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hLyI  493 (552)
                      ++|++.+.||+|+||.||+|.+..+++.+++|.++.... .+.+.+|+++++.++|      +||+++++++....++|+
T Consensus         3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~e~~~~~~l~~------~~i~~~~~~~~~~~~~~l   75 (256)
T cd06612           3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED-LQEIIKEISILKQCDS------PYIVKYYGSYFKNTDLWI   75 (256)
T ss_pred             ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH-HHHHHHHHHHHHhCCC------CcEeeeeeeeecCCcEEE
Confidence            579999999999999999999998899999999986544 6788999999999988      999999999999999999


Q ss_pred             EEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          494 VCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       494 VmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      +||++.+ +|.+++.....     ++++..++.++.||+.||.|||..+|+|++|++-
T Consensus        76 ~~e~~~~~~L~~~l~~~~~-----~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~  128 (256)
T cd06612          76 VMEYCGAGSVSDIMKITNK-----TLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAG  128 (256)
T ss_pred             EEecCCCCcHHHHHHhCcc-----CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcc
Confidence            9999987 99999876443     2899999999999999999999999999999863

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.69  E-value=1.1e-16  Score=157.90  Aligned_cols=127  Identities=17%  Similarity=0.201  Sum_probs=111.2

Q ss_pred             CceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC--hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEE
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL  491 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s--k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hL  491 (552)
                      ++|++++.||+|+||.||++.+..+++.||+|.++..  ......+.+|+.++++++|      +||+++++.+...+++
T Consensus         1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~------~~i~~~~~~~~~~~~~   74 (286)
T cd06622           1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVS------PYIVDFYGAFFIEGAV   74 (286)
T ss_pred             ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCC------CcHHhhhhheecCCeE
Confidence            3688999999999999999999999999999998753  2334678899999999998      9999999999999999


Q ss_pred             EEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHh-CCCeeeeccc
Q 008813          492 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFL-LLVIYFILFC  549 (552)
Q Consensus       492 yIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs-~gIIH~~L~~  549 (552)
                      |+||||+.+ +|.+++......   ..+++..++.++.||+.||.|||+ ++|+|++|++
T Consensus        75 ~lv~e~~~~~~l~~~~~~~~~~---~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p  131 (286)
T cd06622          75 YMCMEYMDAGSLDKLYAGGVAT---EGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKP  131 (286)
T ss_pred             EEEEeecCCCCHHHHHHhcccc---CCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCH
Confidence            999999988 898888764211   128999999999999999999996 5999999986

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.69  E-value=6.3e-16  Score=153.11  Aligned_cols=131  Identities=18%  Similarity=0.216  Sum_probs=111.3

Q ss_pred             ecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeC---
Q 008813          412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL---  488 (552)
Q Consensus       412 i~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~---  488 (552)
                      ..++|.+.+.||+|+||.||++.+..+++.+|+|++.........+.+|+.+++++.+|     +||+++++++...   
T Consensus        20 ~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~~h-----~ni~~~~~~~~~~~~~   94 (291)
T cd06639          20 PTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISDVDEEIEAEYNILQSLPNH-----PNVVKFYGMFYKADKL   94 (291)
T ss_pred             CCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccccHHHHHHHHHHHHHHhcCC-----CCeEEEEEEEEecccc
Confidence            35789999999999999999999999999999999976544456678899999999433     9999999998754   


Q ss_pred             --CEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          489 --EHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       489 --~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                        +.+|+||||+.+ +|.++++.....+  ..+++..++.++.|++.||.|||+++|+|.+|++
T Consensus        95 ~~~~~~lv~ey~~~~sL~~~~~~~~~~~--~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp  156 (291)
T cd06639          95 VGGQLWLVLELCNGGSVTELVKGLLICG--QRLDEAMISYILYGALLGLQHLHNNRIIHRDVKG  156 (291)
T ss_pred             CCCeeEEEEEECCCCcHHHHHHHhhhcC--CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCH
Confidence              468999999977 9999887532211  1389999999999999999999999999999986

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.69  E-value=4.1e-16  Score=156.49  Aligned_cols=135  Identities=20%  Similarity=0.300  Sum_probs=111.1

Q ss_pred             eecCceEEEEEeccCCceEEEEEEECC-------CCcEEEEEEEecC--hhhHHHHHHHHHHHHHhcccCCCCCCCeeEe
Q 008813          411 VIAGRYYVTEYLGSAAFSKVFQAQDLH-------TGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRL  481 (552)
Q Consensus       411 vi~~RY~Ile~LGkG~FG~VykA~Dkk-------tg~~VAVKIIk~s--k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL  481 (552)
                      +..++|.+.+.||+|+||.||++.+..       +...+|+|+++..  ......+.+|+.+++.+..|     +||+++
T Consensus        15 ~~~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h-----~~i~~~   89 (307)
T cd05098          15 VPRDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH-----KNIINL   89 (307)
T ss_pred             eehHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCC-----CCEeeE
Confidence            445789999999999999999998643       2357999999754  22345678899999999433     999999


Q ss_pred             EeEEEeCCEEEEEEecCCC-CHHHHHHhhccCC----------CCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          482 YDYFYHLEHLFIVCELLRA-NLYEFQKFNQESG----------GEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       482 ~d~F~~~~hLyIVmEll~G-sL~d~Lk~~~~~g----------~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      ++++...+.+|+||||+.+ +|.+++...+..+          ....+++..++.++.||+.||+|||++||+|++|++-
T Consensus        90 ~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~  169 (307)
T cd05098          90 LGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAAR  169 (307)
T ss_pred             EEEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCcccccccHH
Confidence            9999999999999999986 9999998653211          0123889999999999999999999999999999964

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.69  E-value=1.8e-16  Score=161.81  Aligned_cols=126  Identities=24%  Similarity=0.269  Sum_probs=110.7

Q ss_pred             ecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC---hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeC
Q 008813          412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL  488 (552)
Q Consensus       412 i~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s---k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~  488 (552)
                      +..+|.+.+.||+|+||.||+|.+..+++.||||.++..   ......+.+|+.+++.++|      +||+++++++...
T Consensus         3 ~~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h------~ni~~~~~~~~~~   76 (337)
T cd07858           3 VDTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDH------ENVIAIKDIMPPP   76 (337)
T ss_pred             cccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCC------CCccchHHheecc
Confidence            446899999999999999999999999999999998753   2234567789999999998      9999999988644


Q ss_pred             -----CEEEEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          489 -----EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       489 -----~hLyIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                           .++||||||++++|.++++....      +++..++.++.||+.||.|||+++|+|++|++
T Consensus        77 ~~~~~~~~~lv~e~~~~~L~~~~~~~~~------l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp  136 (337)
T cd07858          77 HREAFNDVYIVYELMDTDLHQIIRSSQT------LSDDHCQYFLYQLLRGLKYIHSANVLHRDLKP  136 (337)
T ss_pred             cccccCcEEEEEeCCCCCHHHHHhcCCC------CCHHHHHHHHHHHHHHHHHHHhCCEecCCCCH
Confidence                 45899999999999999886543      89999999999999999999999999999985

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.69  E-value=2.6e-16  Score=158.34  Aligned_cols=131  Identities=20%  Similarity=0.191  Sum_probs=111.8

Q ss_pred             ceecCceEEEEEeccCCceEEEEEEEC-----CCCcEEEEEEEecC--hhhHHHHHHHHHHHHHh-cccCCCCCCCeeEe
Q 008813          410 TVIAGRYYVTEYLGSAAFSKVFQAQDL-----HTGVDVCLKIIKND--KDFFDQSLDEIKLLKLV-NKNDPADEHHILRL  481 (552)
Q Consensus       410 dvi~~RY~Ile~LGkG~FG~VykA~Dk-----ktg~~VAVKIIk~s--k~~~~~~lrEIkILk~L-~hhd~~d~pnIVrL  481 (552)
                      .....+|.+.+.||+|+||.||++.+.     .++..||||+++..  ....+.+.+|+.+++++ +|      +||+++
T Consensus        31 ~~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h------~~iv~~  104 (302)
T cd05055          31 EFPRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNH------ENIVNL  104 (302)
T ss_pred             cccHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCC------CCcceE
Confidence            345578999999999999999999753     34568999998754  23345688999999999 56      999999


Q ss_pred             EeEEEeCCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          482 YDYFYHLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       482 ~d~F~~~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      ++++...+.+|+||||+.+ +|.++++......    +++..+..|+.||+.||.|||+++|+|.+|++-
T Consensus       105 ~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~----l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~  170 (302)
T cd05055         105 LGACTIGGPILVITEYCCYGDLLNFLRRKRESF----LTLEDLLSFSYQVAKGMAFLASKNCIHRDLAAR  170 (302)
T ss_pred             EEEEecCCceEEEEEcCCCCcHHHHHHhCCCCC----CCHHHHHHHHHHHHHHHHHHHHCCeehhhhccc
Confidence            9999999999999999876 9999998654322    899999999999999999999999999999974

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.69  E-value=7.1e-16  Score=148.99  Aligned_cols=128  Identities=19%  Similarity=0.177  Sum_probs=112.6

Q ss_pred             CceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecCh--hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEE
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL  491 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk--~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hL  491 (552)
                      ++|++.+.||.|+||.||+|....++..+|+|++....  ...+.+.+|+++|+.++|      +||+++++.+...+..
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~------~~i~~~~~~~~~~~~~   74 (267)
T cd06610           1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNH------PNVVKYYTSFVVGDEL   74 (267)
T ss_pred             CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCC------CCEEEEEEEEeeCCEE
Confidence            36999999999999999999998899999999997542  245678899999999998      9999999999999999


Q ss_pred             EEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          492 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       492 yIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      ++|||++.+ +|.++++.....   ..+++..++.++.||+.||.|||++||+|.+|++-
T Consensus        75 ~iv~e~~~~~~l~~~~~~~~~~---~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~  131 (267)
T cd06610          75 WLVMPYLSGGSLLDIMKSSYPR---GGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAG  131 (267)
T ss_pred             EEEEeccCCCcHHHHHHHhccc---CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHH
Confidence            999999987 899999865321   12899999999999999999999999999999863

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.69  E-value=1.9e-16  Score=160.90  Aligned_cols=120  Identities=14%  Similarity=0.139  Sum_probs=105.7

Q ss_pred             EEeccC--CceEEEEEEECCCCcEEEEEEEecC---hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEEEEE
Q 008813          420 EYLGSA--AFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIV  494 (552)
Q Consensus       420 e~LGkG--~FG~VykA~Dkktg~~VAVKIIk~s---k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hLyIV  494 (552)
                      ..||+|  +||+||+|++..+++.||||++...   ....+.+.+|+.+++.++|      +||++++++|...+++|+|
T Consensus         4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h------~niv~~~~~~~~~~~~~~v   77 (328)
T cd08226           4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRH------PNIMTSWTVFTTGSWLWVI   77 (328)
T ss_pred             HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCC------CCcceEeeeEecCCceEEE
Confidence            456666  9999999999999999999998753   2234678899999999998      9999999999999999999


Q ss_pred             EecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          495 CELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       495 mEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      |||+.+ +|.+++++....+    +++..++.++.||+.||.|||+++|||+|||+
T Consensus        78 ~e~~~~~~l~~~l~~~~~~~----~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp  129 (328)
T cd08226          78 SPFMAYGSANSLLKTYFPEG----MSEALIGNILFGALRGLNYLHQNGYIHRNIKA  129 (328)
T ss_pred             EecccCCCHHHHHHhhcccC----CCHHHHHHHHHHHHHHHHHHHhCCeecCCCCH
Confidence            999987 9999988764333    89999999999999999999999999999986

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.69  E-value=3.9e-16  Score=152.58  Aligned_cols=134  Identities=16%  Similarity=0.178  Sum_probs=111.3

Q ss_pred             eecCceEEEEEeccCCceEEEEEEECCC-----CcEEEEEEEecCh--hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEe
Q 008813          411 VIAGRYYVTEYLGSAAFSKVFQAQDLHT-----GVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYD  483 (552)
Q Consensus       411 vi~~RY~Ile~LGkG~FG~VykA~Dkkt-----g~~VAVKIIk~sk--~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d  483 (552)
                      +...+|++.+.||+|+||.||++.+...     +..||+|++....  .....+.+|+.+|+.++|      +||+++++
T Consensus         3 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~------~~i~~~~~   76 (277)
T cd05032           3 LPREKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNC------HHVVRLLG   76 (277)
T ss_pred             cchHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCC------CceeEEEE
Confidence            3456899999999999999999998644     3789999987542  234567899999999998      99999999


Q ss_pred             EEEeCCEEEEEEecCCC-CHHHHHHhhccCC----CCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          484 YFYHLEHLFIVCELLRA-NLYEFQKFNQESG----GEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       484 ~F~~~~hLyIVmEll~G-sL~d~Lk~~~~~g----~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      ++....+.++||||+.+ +|.+++.......    ....+++..+..++.||+.||.|||+++|+|++|++-
T Consensus        77 ~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~  148 (277)
T cd05032          77 VVSTGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAAR  148 (277)
T ss_pred             EEcCCCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccChh
Confidence            99999999999999976 9999997543210    0122688899999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.69  E-value=2e-16  Score=162.09  Aligned_cols=124  Identities=22%  Similarity=0.247  Sum_probs=109.3

Q ss_pred             cCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecCh-hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeC---
Q 008813          413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK-DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL---  488 (552)
Q Consensus       413 ~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk-~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~---  488 (552)
                      ..||.+.+.||.|+||.||+|.+..+++.||+|++.... ...+.+.+|+.+++.++|      +||+++++++...   
T Consensus         4 ~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h------~~i~~~~~~~~~~~~~   77 (342)
T cd07854           4 GSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDH------DNIVKVYEVLGPSGSD   77 (342)
T ss_pred             CcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCC------CcchhhHhhhcccccc
Confidence            479999999999999999999999999999999987642 334678899999999998      9999999876644   


Q ss_pred             -----------CEEEEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          489 -----------EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       489 -----------~hLyIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                                 ..+|+||||++++|.+++....       +++..++.++.||+.||.|||++||+|++|++
T Consensus        78 ~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~-------l~~~~~~~~~~qi~~aL~~LH~~givH~dikp  142 (342)
T cd07854          78 LTEDVGSLTELNSVYIVQEYMETDLANVLEQGP-------LSEEHARLFMYQLLRGLKYIHSANVLHRDLKP  142 (342)
T ss_pred             cccccccccccceEEEEeecccccHHHHHHcCC-------CCHHHHHHHHHHHHHHHHHHHhCCcccCCCCH
Confidence                       3689999999999998886432       89999999999999999999999999999985

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.69  E-value=1.7e-16  Score=158.00  Aligned_cols=131  Identities=18%  Similarity=0.225  Sum_probs=109.1

Q ss_pred             cCceEEEEEeccCCceEEEEEEECCC--------------CcEEEEEEEecC--hhhHHHHHHHHHHHHHhcccCCCCCC
Q 008813          413 AGRYYVTEYLGSAAFSKVFQAQDLHT--------------GVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEH  476 (552)
Q Consensus       413 ~~RY~Ile~LGkG~FG~VykA~Dkkt--------------g~~VAVKIIk~s--k~~~~~~lrEIkILk~L~hhd~~d~p  476 (552)
                      ..||++.+.||+|+||.||+|++..+              ...||||+++..  ......+.+|++++++++|      +
T Consensus         4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h------~   77 (295)
T cd05097           4 RQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKN------P   77 (295)
T ss_pred             hHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCC------C
Confidence            36899999999999999999987543              235899998754  3344678899999999998      9


Q ss_pred             CeeEeEeEEEeCCEEEEEEecCCC-CHHHHHHhhccCC------CCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          477 HILRLYDYFYHLEHLFIVCELLRA-NLYEFQKFNQESG------GEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       477 nIVrL~d~F~~~~hLyIVmEll~G-sL~d~Lk~~~~~g------~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ||+++++++...+.+++||||+.+ +|.+++.......      ....+++..+..++.||+.||.|||+++|+|.+||+
T Consensus        78 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp  157 (295)
T cd05097          78 NIIRLLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLAT  157 (295)
T ss_pred             CcCeEEEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccccCh
Confidence            999999999999999999999987 9999986542100      011268889999999999999999999999999986

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.69  E-value=2.5e-16  Score=158.90  Aligned_cols=125  Identities=16%  Similarity=0.187  Sum_probs=107.0

Q ss_pred             CceEEEEEeccCCceEEEEEEECCCCc----EEEEEEEecC--hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEe
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLHTGV----DVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH  487 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkktg~----~VAVKIIk~s--k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~  487 (552)
                      .+|++.+.||+|+||.||+|.+..+++    .||||+++..  ....+.+.+|+.+++.++|      +||+++++++..
T Consensus         7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h------~niv~~~g~~~~   80 (316)
T cd05108           7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN------PHVCRLLGICLT   80 (316)
T ss_pred             hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCC------CCCCeEEEEEcC
Confidence            579999999999999999999876655    3899998753  3345678899999999998      999999999876


Q ss_pred             CCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          488 LEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       488 ~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      . ..++|+|++.+ +|.++++.+...     +++..+..++.||+.||.|||++||||+|||+-
T Consensus        81 ~-~~~~v~e~~~~g~l~~~l~~~~~~-----~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~  138 (316)
T cd05108          81 S-TVQLITQLMPFGCLLDYVREHKDN-----IGSQYLLNWCVQIAKGMNYLEERRLVHRDLAAR  138 (316)
T ss_pred             C-CceeeeecCCCCCHHHHHHhcccc-----CCHHHHHHHHHHHHHHHHHHHhcCeeccccchh
Confidence            5 46789999876 999999876432     789999999999999999999999999999973

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.69  E-value=4.5e-16  Score=151.95  Aligned_cols=123  Identities=22%  Similarity=0.290  Sum_probs=110.5

Q ss_pred             eEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC---hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeC--CE
Q 008813          416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL--EH  490 (552)
Q Consensus       416 Y~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s---k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~--~h  490 (552)
                      |++++.||.|+||.||+|.+..+++.+|+|+++..   ......+.+|+.+++.++|      +||+++++++...  +.
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~------~~i~~~~~~~~~~~~~~   74 (287)
T cd07840           1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRH------PNIVRLKEIVTSKGKGS   74 (287)
T ss_pred             CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccC------CCeeeheeeEecCCCCc
Confidence            67889999999999999999999999999999865   2344567899999999998      9999999999988  89


Q ss_pred             EEEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          491 LFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       491 LyIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ++|||||+.++|.+++.....     .+++..++.++.||+.||.|||++|++|.+|++
T Consensus        75 ~~lv~e~~~~~l~~~~~~~~~-----~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p  128 (287)
T cd07840          75 IYMVFEYMDHDLTGLLDSPEV-----KFTESQIKCYMKQLLEGLQYLHSNGILHRDIKG  128 (287)
T ss_pred             EEEEeccccccHHHHHhccCC-----CCCHHHHHHHHHHHHHHHHHHHHCCceeccCcH
Confidence            999999999999999876532     289999999999999999999999999999986

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=99.68  E-value=4.1e-16  Score=169.97  Aligned_cols=130  Identities=16%  Similarity=0.163  Sum_probs=111.3

Q ss_pred             ecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC---hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeC
Q 008813          412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL  488 (552)
Q Consensus       412 i~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s---k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~  488 (552)
                      ..+||++.+.||+|+||.||+|++..+++.||||++...   ......+.+|+.+|..++|      +||++++..+...
T Consensus        30 ~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h------~~iv~~~~~~~~~  103 (496)
T PTZ00283         30 QAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDF------FSIVKCHEDFAKK  103 (496)
T ss_pred             cCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCC------CcEEEeecceecc
Confidence            347999999999999999999999999999999999753   3334567899999999988      9999999887643


Q ss_pred             C--------EEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          489 E--------HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       489 ~--------hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      .        .+++||||+.+ +|.++++.+....  .++++..++.|+.||+.||.|||+++|||+|||+
T Consensus       104 ~~~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~--~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP  171 (496)
T PTZ00283        104 DPRNPENVLMIALVLDYANAGDLRQEIKSRAKTN--RTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKS  171 (496)
T ss_pred             cccCcccceEEEEEEeCCCCCcHHHHHHHhhccC--CCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCH
Confidence            2        47899999986 9999998654322  3489999999999999999999999999999996

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.68  E-value=1.8e-16  Score=157.12  Aligned_cols=119  Identities=12%  Similarity=0.065  Sum_probs=99.6

Q ss_pred             EeccCCceEEEEEEECC------------------------CCcEEEEEEEecCh-hhHHHHHHHHHHHHHhcccCCCCC
Q 008813          421 YLGSAAFSKVFQAQDLH------------------------TGVDVCLKIIKNDK-DFFDQSLDEIKLLKLVNKNDPADE  475 (552)
Q Consensus       421 ~LGkG~FG~VykA~Dkk------------------------tg~~VAVKIIk~sk-~~~~~~lrEIkILk~L~hhd~~d~  475 (552)
                      +||+|+||.||+|....                        ....||+|++.... .....+.+|+.+++.++|      
T Consensus         2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h------   75 (274)
T cd05076           2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSH------   75 (274)
T ss_pred             CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCC------
Confidence            69999999999997432                        12458899887542 233567788999999998      


Q ss_pred             CCeeEeEeEEEeCCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          476 HHILRLYDYFYHLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       476 pnIVrL~d~F~~~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      +||+++++++......+|||||+.+ +|..+++....     .+++..+..++.||+.||.|||+++|||+|||+-
T Consensus        76 ~niv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~-----~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~  146 (274)
T cd05076          76 IHLAFVHGVCVRGSENIMVEEFVEHGPLDVCLRKEKG-----RVPVAWKITVAQQLASALSYLEDKNLVHGNVCAK  146 (274)
T ss_pred             CCeeeEEEEEEeCCceEEEEecCCCCcHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcc
Confidence            9999999999999999999999987 88888875432     2899999999999999999999999999999973

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.68  E-value=4.5e-16  Score=154.07  Aligned_cols=124  Identities=18%  Similarity=0.300  Sum_probs=109.0

Q ss_pred             ceEEEEEeccCCceEEEEEEEC---CCCcEEEEEEEecCh-----hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEE
Q 008813          415 RYYVTEYLGSAAFSKVFQAQDL---HTGVDVCLKIIKNDK-----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFY  486 (552)
Q Consensus       415 RY~Ile~LGkG~FG~VykA~Dk---ktg~~VAVKIIk~sk-----~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~  486 (552)
                      .|++.+.||+|+||.||+|.+.   .+++.||+|+++...     ...+.+.+|+++|+.+.+|     ++|++++++|.
T Consensus         1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~-----~~i~~~~~~~~   75 (290)
T cd05613           1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQS-----PFLVTLHYAFQ   75 (290)
T ss_pred             CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccC-----CChhceeeEee
Confidence            3889999999999999999875   478999999997532     2345678899999999755     99999999999


Q ss_pred             eCCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          487 HLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       487 ~~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ....+|+||||+.+ +|.+++.....      +++..+..++.||+.||.|||++||+|++|++
T Consensus        76 ~~~~~~lv~e~~~~~~L~~~l~~~~~------l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p  133 (290)
T cd05613          76 TDTKLHLILDYINGGELFTHLSQRER------FKEQEVQIYSGEIVLALEHLHKLGIIYRDIKL  133 (290)
T ss_pred             cCCeEEEEEecCCCCcHHHHHHHcCC------CCHHHHHHHHHHHHHHHHHHHhCCeeccCCCH
Confidence            99999999999987 99999886542      89999999999999999999999999999986

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.68  E-value=3.8e-16  Score=156.98  Aligned_cols=131  Identities=17%  Similarity=0.173  Sum_probs=108.1

Q ss_pred             CceEEEEEeccCCceEEEEEEECCCCcE--EEEEEEecC--hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCC
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLHTGVD--VCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE  489 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkktg~~--VAVKIIk~s--k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~  489 (552)
                      ..|++.+.||+|+||.||+|.++.++..  +|+|.++..  ......+.+|+.++.++.+|     +||+++++++...+
T Consensus         7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h-----~~iv~~~~~~~~~~   81 (303)
T cd05088           7 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHH-----PNIINLLGACEHRG   81 (303)
T ss_pred             hhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCC-----CCcceEEEEECCCC
Confidence            4689999999999999999999877754  577766542  33445778899999999433     99999999999999


Q ss_pred             EEEEEEecCCC-CHHHHHHhhccCC----------CCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          490 HLFIVCELLRA-NLYEFQKFNQESG----------GEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       490 hLyIVmEll~G-sL~d~Lk~~~~~g----------~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      .+|+||||+.+ +|.++++......          ....+++..++.++.||+.||+|||++||+|++|++
T Consensus        82 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp  152 (303)
T cd05088          82 YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAA  152 (303)
T ss_pred             CceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCccccccch
Confidence            99999999976 9999997653110          011388999999999999999999999999999986

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.68  E-value=3.4e-16  Score=155.95  Aligned_cols=131  Identities=20%  Similarity=0.250  Sum_probs=109.5

Q ss_pred             cCceEEEEEeccCCceEEEEEEECC----------------CCcEEEEEEEecC--hhhHHHHHHHHHHHHHhcccCCCC
Q 008813          413 AGRYYVTEYLGSAAFSKVFQAQDLH----------------TGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPAD  474 (552)
Q Consensus       413 ~~RY~Ile~LGkG~FG~VykA~Dkk----------------tg~~VAVKIIk~s--k~~~~~~lrEIkILk~L~hhd~~d  474 (552)
                      .+||++.+.||+|+||.||++.+..                +...||||+++..  ......+.+|+.+++.++|     
T Consensus         4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~-----   78 (296)
T cd05095           4 RKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKD-----   78 (296)
T ss_pred             hhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCC-----
Confidence            4689999999999999999986532                3457999999754  3345678899999999998     


Q ss_pred             CCCeeEeEeEEEeCCEEEEEEecCCC-CHHHHHHhhccCCC-----CcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecc
Q 008813          475 EHHILRLYDYFYHLEHLFIVCELLRA-NLYEFQKFNQESGG-----EAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILF  548 (552)
Q Consensus       475 ~pnIVrL~d~F~~~~hLyIVmEll~G-sL~d~Lk~~~~~g~-----~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~  548 (552)
                       +||+++++++...+.+++||||+.+ +|.+++........     ...+++..+..++.||+.||.|||++||+|++||
T Consensus        79 -~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlk  157 (296)
T cd05095          79 -PNIIRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLA  157 (296)
T ss_pred             -CCcceEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeecccCC
Confidence             9999999999999999999999976 99999876432110     0127788999999999999999999999999998


Q ss_pred             c
Q 008813          549 C  549 (552)
Q Consensus       549 ~  549 (552)
                      +
T Consensus       158 p  158 (296)
T cd05095         158 T  158 (296)
T ss_pred             h
Confidence            6

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.68  E-value=7.7e-16  Score=147.34  Aligned_cols=124  Identities=23%  Similarity=0.274  Sum_probs=113.0

Q ss_pred             ceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecCh---hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEE
Q 008813          415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL  491 (552)
Q Consensus       415 RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk---~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hL  491 (552)
                      +|++.+.||+|++|.||++.+..+++.||+|.+....   .....+.+|++++++++|      +||+++++++...+.+
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~------~~i~~~~~~~~~~~~~   74 (254)
T cd06627           1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKH------PNIVKYIGSIETSDSL   74 (254)
T ss_pred             CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCC------CCccEEEEEEEeCCEE
Confidence            5899999999999999999999999999999998653   355778999999999998      9999999999999999


Q ss_pred             EEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          492 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       492 yIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      ++|||++.+ +|.+++.....      +++..++.++.|++.||.|||++||+|.+|++-
T Consensus        75 ~~v~e~~~~~~L~~~~~~~~~------l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~  128 (254)
T cd06627          75 YIILEYAENGSLRQIIKKFGP------FPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAA  128 (254)
T ss_pred             EEEEecCCCCcHHHHHHhccC------CCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHH
Confidence            999999987 99999887532      899999999999999999999999999999864

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.68  E-value=7.9e-16  Score=150.32  Aligned_cols=124  Identities=19%  Similarity=0.224  Sum_probs=108.6

Q ss_pred             CceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC------hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEe
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND------KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH  487 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s------k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~  487 (552)
                      .+|++.+.||+|+||.||+|.+..+++.||+|++...      ......+.+|+.+++.++|      +||+++++++..
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h------~~i~~~~~~~~~   75 (264)
T cd06653           2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRH------DRIVQYYGCLRD   75 (264)
T ss_pred             CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCC------CCcceEEEEEEc
Confidence            3699999999999999999999999999999988532      2234578899999999998      999999999875


Q ss_pred             C--CEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          488 L--EHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       488 ~--~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      .  ..+++|||++.+ +|.+++.....      +++..++.++.||+.||.|||+++|+|++|++
T Consensus        76 ~~~~~~~~v~e~~~~~~L~~~~~~~~~------l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p  134 (264)
T cd06653          76 PEEKKLSIFVEYMPGGSIKDQLKAYGA------LTENVTRRYTRQILQGVSYLHSNMIVHRDIKG  134 (264)
T ss_pred             CCCCEEEEEEEeCCCCcHHHHHHHcCC------CCHHHHHHHHHHHHHHHHHHHhCCEecCCCCH
Confidence            4  568999999976 89999876432      78999999999999999999999999999986

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.68  E-value=2.4e-16  Score=153.30  Aligned_cols=124  Identities=19%  Similarity=0.220  Sum_probs=110.9

Q ss_pred             CceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC----hhhHHHHHHHHHHHHHhc-ccCCCCCCCeeEeEeEEEeC
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND----KDFFDQSLDEIKLLKLVN-KNDPADEHHILRLYDYFYHL  488 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s----k~~~~~~lrEIkILk~L~-hhd~~d~pnIVrL~d~F~~~  488 (552)
                      .+|.+.+.||+|+||.||++.+..+++.||+|++...    ......+.+|+.+++++. |      +||+++++.+...
T Consensus         1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~------~~i~~~~~~~~~~   74 (280)
T cd05581           1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGH------PGIIKLYYTFQDE   74 (280)
T ss_pred             CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccC------CCchhHHHHhcCC
Confidence            3699999999999999999999999999999998753    222356788999999998 6      9999999999999


Q ss_pred             CEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          489 EHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       489 ~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      +.+++|||++.+ +|.+++.....      +++..++.|+.||+.||.|||++|++|.+|++
T Consensus        75 ~~~~lv~e~~~~~~L~~~l~~~~~------l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~  130 (280)
T cd05581          75 ENLYFVLEYAPNGELLQYIRKYGS------LDEKCTRFYAAEILLALEYLHSKGIIHRDLKP  130 (280)
T ss_pred             ceEEEEEcCCCCCcHHHHHHHcCC------CCHHHHHHHHHHHHHHHHHHHHCCeeecCCCH
Confidence            999999999955 99999987542      89999999999999999999999999999986

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.68  E-value=5.4e-16  Score=152.45  Aligned_cols=124  Identities=21%  Similarity=0.273  Sum_probs=104.6

Q ss_pred             EEEEEeccCCceEEEEEEEC----CCCcEEEEEEEecC--hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCE
Q 008813          417 YVTEYLGSAAFSKVFQAQDL----HTGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH  490 (552)
Q Consensus       417 ~Ile~LGkG~FG~VykA~Dk----ktg~~VAVKIIk~s--k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~h  490 (552)
                      .+.+.||.|+||.||+|...    ..+..|+||+++..  ....+.+.+|++++++++|      |||+++++++...+.
T Consensus         2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h------~ni~~~~g~~~~~~~   75 (259)
T PF07714_consen    2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRH------PNIVKLYGFCIENEP   75 (259)
T ss_dssp             EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSB------TTBE-EEEEEESSSS
T ss_pred             EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccccc------ccccccccccccccc
Confidence            46789999999999999987    34678999999653  3346788999999999988      999999999998888


Q ss_pred             EEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          491 LFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       491 LyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      +++||||+.+ +|.++|......    .+++..+..|+.||+.||.|||+++|||.+|++-
T Consensus        76 ~~lv~e~~~~g~L~~~L~~~~~~----~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~  132 (259)
T PF07714_consen   76 LFLVMEYCPGGSLDDYLKSKNKE----PLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPS  132 (259)
T ss_dssp             EEEEEE--TTEBHHHHHHHTCTT----TSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGG
T ss_pred             ccccccccccccccccccccccc----cccccccccccccccccccccccccccccccccc
Confidence            9999999986 999999987222    2899999999999999999999999999999873

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.68  E-value=4.8e-16  Score=151.57  Aligned_cols=126  Identities=16%  Similarity=0.167  Sum_probs=109.9

Q ss_pred             CceEEEEEeccCCceEEEEEEECCCCc---EEEEEEEecC--hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeC
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLHTGV---DVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL  488 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkktg~---~VAVKIIk~s--k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~  488 (552)
                      .+|...+.||+|+||+||+|.+..+++   .+|||.++..  ....+.+..|+++++.++|      +||+++.+++...
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h------~~i~~~~~~~~~~   78 (268)
T cd05063           5 SHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSH------HNIIRLEGVVTKF   78 (268)
T ss_pred             HHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCC------CCeeEEEEEEccC
Confidence            468889999999999999999876554   7999998754  2334678899999999998      9999999999999


Q ss_pred             CEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          489 EHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       489 ~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      +++|+||||+.+ +|.++++.+..     .+++..+..++.|++.||.|||++||+|.+|++-
T Consensus        79 ~~~~lv~e~~~~~~L~~~~~~~~~-----~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~  136 (268)
T cd05063          79 KPAMIITEYMENGALDKYLRDHDG-----EFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAAR  136 (268)
T ss_pred             CCcEEEEEcCCCCCHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHHCCeeccccchh
Confidence            999999999987 99999876432     2899999999999999999999999999999974

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.68  E-value=4.8e-16  Score=158.87  Aligned_cols=126  Identities=28%  Similarity=0.302  Sum_probs=110.7

Q ss_pred             ecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC---hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEe-
Q 008813          412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH-  487 (552)
Q Consensus       412 i~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s---k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~-  487 (552)
                      +.++|++++.||.|+||.||+|.+..+++.||||++...   ....+.+.+|+.+++.++|      |||++++++|.. 
T Consensus         8 ~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h------pniv~~~~~~~~~   81 (328)
T cd07856           8 ITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRH------ENIISLSDIFISP   81 (328)
T ss_pred             cccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCC------CCeeeEeeeEecC
Confidence            467899999999999999999999999999999988642   2234667899999999998      999999999876 


Q ss_pred             CCEEEEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          488 LEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       488 ~~hLyIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      .+.+|+||||++++|..+++...       +++..++.++.||+.||.|||+++|+|++|++-
T Consensus        82 ~~~~~lv~e~~~~~L~~~~~~~~-------~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~  137 (328)
T cd07856          82 LEDIYFVTELLGTDLHRLLTSRP-------LEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPS  137 (328)
T ss_pred             CCcEEEEeehhccCHHHHHhcCC-------CCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHH
Confidence            56899999999889998887432       788999999999999999999999999999863

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.68  E-value=3.5e-16  Score=154.16  Aligned_cols=123  Identities=20%  Similarity=0.237  Sum_probs=110.6

Q ss_pred             CceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC--hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEE
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL  491 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s--k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hL  491 (552)
                      ..|+.++.||.|+||.||+|.+..++..||||++...  ......+.+|+.+++.++|      +||+++++++....++
T Consensus         4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h------~~i~~~~~~~~~~~~~   77 (277)
T cd06640           4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDS------PYVTKYYGSYLKGTKL   77 (277)
T ss_pred             HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCC------CCEeeEEEEEEECCEE
Confidence            4688889999999999999999999999999998754  2344678899999999998      9999999999999999


Q ss_pred             EEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          492 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       492 yIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ||||||+.+ +|.++++...       +++..+..++.|++.||.|||+++|+|.+|++
T Consensus        78 ~lv~e~~~~~~L~~~i~~~~-------l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p  129 (277)
T cd06640          78 WIIMEYLGGGSALDLLRAGP-------FDEFQIATMLKEILKGLDYLHSEKKIHRDIKA  129 (277)
T ss_pred             EEEEecCCCCcHHHHHhcCC-------CCHHHHHHHHHHHHHHHHHHHhCCccCcCCCh
Confidence            999999987 9999887532       88999999999999999999999999999986

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]

Probab=99.68  E-value=6.6e-17  Score=175.74  Aligned_cols=126  Identities=20%  Similarity=0.307  Sum_probs=112.9

Q ss_pred             CceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChhhHH---------HHHHHHHHHHHhcccCCCCCCCeeEeEeE
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFD---------QSLDEIKLLKLVNKNDPADEHHILRLYDY  484 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~~~~---------~~lrEIkILk~L~hhd~~d~pnIVrL~d~  484 (552)
                      ..|..++.||.|+||+|++|.++.+...|.||.|.+.+-..+         .+-.||.||..|+.|   .|+||++++++
T Consensus       561 s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~---sH~NIlKlLdf  637 (772)
T KOG1152|consen  561 SDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKH---SHENILKLLDF  637 (772)
T ss_pred             ccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhc---Cccchhhhhhe
Confidence            449999999999999999999999999999999988654333         345799999999954   23999999999


Q ss_pred             EEeCCEEEEEEecCCC--CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecc
Q 008813          485 FYHLEHLFIVCELLRA--NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILF  548 (552)
Q Consensus       485 F~~~~hLyIVmEll~G--sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~  548 (552)
                      |++++++||+||-.+.  +|+++|..+..      ++|.+++.|++||+.|+++||+.||||+|+|
T Consensus       638 FEddd~yyl~te~hg~gIDLFd~IE~kp~------m~E~eAk~IFkQV~agi~hlh~~~ivhrdik  697 (772)
T KOG1152|consen  638 FEDDDYYYLETEVHGEGIDLFDFIEFKPR------MDEPEAKLIFKQVVAGIKHLHDQGIVHRDIK  697 (772)
T ss_pred             eecCCeeEEEecCCCCCcchhhhhhccCc------cchHHHHHHHHHHHhccccccccCceecccc
Confidence            9999999999998764  99999998876      9999999999999999999999999999998

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.68  E-value=4.9e-16  Score=179.72  Aligned_cols=130  Identities=16%  Similarity=0.129  Sum_probs=112.3

Q ss_pred             CceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC----hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCC
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND----KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE  489 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s----k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~  489 (552)
                      +||+++++||+|+||.||+|++..+++.||||+++..    ....+.+.+|+++++.++|      |||+++++++...+
T Consensus         2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~H------PNIVkl~~v~~d~~   75 (932)
T PRK13184          2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIH------PGIVPVYSICSDGD   75 (932)
T ss_pred             CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCC------cCcCeEEEEEeeCC
Confidence            6899999999999999999999999999999999753    2345678899999999998      99999999999999


Q ss_pred             EEEEEEecCCC-CHHHHHHhhccCC-----CCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          490 HLFIVCELLRA-NLYEFQKFNQESG-----GEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       490 hLyIVmEll~G-sL~d~Lk~~~~~g-----~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      .+|+||||+.| +|.++++......     ....++...+..++.||+.||.|||++||||+|||+
T Consensus        76 ~lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKP  141 (932)
T PRK13184         76 PVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKP  141 (932)
T ss_pred             EEEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCch
Confidence            99999999987 9999987532110     011256778899999999999999999999999997

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.68  E-value=4.9e-16  Score=150.93  Aligned_cols=128  Identities=16%  Similarity=0.185  Sum_probs=105.8

Q ss_pred             eEEEEEeccCCceEEEEEEECC---CCcEEEEEEEecC---hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCC
Q 008813          416 YYVTEYLGSAAFSKVFQAQDLH---TGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE  489 (552)
Q Consensus       416 Y~Ile~LGkG~FG~VykA~Dkk---tg~~VAVKIIk~s---k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~  489 (552)
                      |.+.+.||+|+||.||+|....   ++..||||+++..   ......+.+|+.+++.++|      +||+++++++....
T Consensus         1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h------~~iv~~~~~~~~~~   74 (273)
T cd05035           1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDH------PNVMKLIGVCFEAS   74 (273)
T ss_pred             CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCC------CCeeeEEeeeccCC
Confidence            5678899999999999998764   3478999999754   2334678899999999998      99999999887554


Q ss_pred             E------EEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          490 H------LFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       490 h------LyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      .      .++||||+.+ +|..++...........+++..++.++.||+.||.|||+++|+|++||+
T Consensus        75 ~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp  141 (273)
T cd05035          75 SLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAA  141 (273)
T ss_pred             ccccCcccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccch
Confidence            3      8999999986 9999886543221123489999999999999999999999999999996

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.68  E-value=2.4e-16  Score=155.80  Aligned_cols=124  Identities=14%  Similarity=0.160  Sum_probs=111.3

Q ss_pred             CceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC--hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEE
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL  491 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s--k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hL  491 (552)
                      .+|++++.||+|+||.||++.+..+++.||+|++...  ......+.+|+++++.++|      +||+++++++...+++
T Consensus         5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h------~~i~~~~~~~~~~~~~   78 (284)
T cd06620           5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRS------PYIVSFYGAFLNENNI   78 (284)
T ss_pred             HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCC------CCcceEeeeEecCCEE
Confidence            5788999999999999999999999999999998754  3345678899999999998      9999999999999999


Q ss_pred             EEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHh-CCCeeeeccc
Q 008813          492 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFL-LLVIYFILFC  549 (552)
Q Consensus       492 yIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs-~gIIH~~L~~  549 (552)
                      |+||||+.+ +|.+++...+.      +++..++.++.|++.||.|||+ ++|+|++|++
T Consensus        79 ~lv~e~~~~~~L~~~~~~~~~------~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p  132 (284)
T cd06620          79 CMCMEFMDCGSLDRIYKKGGP------IPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKP  132 (284)
T ss_pred             EEEEecCCCCCHHHHHHhccC------CCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCH
Confidence            999999987 89888876432      8999999999999999999996 6899999985

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.68  E-value=2.8e-16  Score=167.08  Aligned_cols=135  Identities=16%  Similarity=0.187  Sum_probs=110.9

Q ss_pred             eecCceEEEEEeccCCceEEEEEEEC-----CCCcEEEEEEEecC--hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEe
Q 008813          411 VIAGRYYVTEYLGSAAFSKVFQAQDL-----HTGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYD  483 (552)
Q Consensus       411 vi~~RY~Ile~LGkG~FG~VykA~Dk-----ktg~~VAVKIIk~s--k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d  483 (552)
                      +..++|.+.+.||+|+||.||+|.++     .+++.||||+++..  ....+.+.+|+++|..+..|     +|||++++
T Consensus        34 ~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H-----~niv~~~~  108 (401)
T cd05107          34 MPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPH-----LNIVNLLG  108 (401)
T ss_pred             ecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCC-----CCeEEEEE
Confidence            44567899999999999999999864     34578999999754  22345688999999999833     99999999


Q ss_pred             EEEeCCEEEEEEecCCC-CHHHHHHhhccC--------------------------------------------------
Q 008813          484 YFYHLEHLFIVCELLRA-NLYEFQKFNQES--------------------------------------------------  512 (552)
Q Consensus       484 ~F~~~~hLyIVmEll~G-sL~d~Lk~~~~~--------------------------------------------------  512 (552)
                      ++...++++|||||+.+ +|.+++..++..                                                  
T Consensus       109 ~~~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (401)
T cd05107         109 ACTKGGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESAD  188 (401)
T ss_pred             EEccCCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccC
Confidence            99999999999999987 999999764320                                                  


Q ss_pred             ------------------------------------------CCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          513 ------------------------------------------GGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       513 ------------------------------------------g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                                                                .....+++..++.|+.||+.||.|||+++|+|++||+-
T Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrdlkp~  268 (401)
T cd05107         189 YVPMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKNCVHRDLAAR  268 (401)
T ss_pred             ccchhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCcCcccCCcc
Confidence                                                      00123678888999999999999999999999999963

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.68  E-value=1.7e-16  Score=161.57  Aligned_cols=125  Identities=25%  Similarity=0.320  Sum_probs=110.4

Q ss_pred             cCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecCh---hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEe--
Q 008813          413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH--  487 (552)
Q Consensus       413 ~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk---~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~--  487 (552)
                      ..+|++.+.||+|+||.||+|.+..+++.||+|++....   .....+.+|+.+|+.++|      +||++++++|..  
T Consensus         4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h------~~iv~~~~~~~~~~   77 (334)
T cd07855           4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKH------DNIIAIRDILRPPG   77 (334)
T ss_pred             hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCC------CCccCHHHhccccC
Confidence            468999999999999999999999999999999987542   234667889999999998      999999998863  


Q ss_pred             --CCEEEEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          488 --LEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       488 --~~hLyIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                        ..++|+||||+.++|.+++.....      +++..++.++.||+.||.|||+++|+|++|++
T Consensus        78 ~~~~~~~lv~e~~~~~l~~~~~~~~~------~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp  135 (334)
T cd07855          78 ADFKDVYVVMDLMESDLHHIIHSDQP------LTEEHIRYFLYQLLRGLKYIHSANVIHRDLKP  135 (334)
T ss_pred             CCCceEEEEEehhhhhHHHHhccCCC------CCHHHHHHHHHHHHHHHHHHHHCCeecCCCCH
Confidence              357999999999999998875442      89999999999999999999999999999986

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.68  E-value=4.3e-16  Score=154.05  Aligned_cols=124  Identities=17%  Similarity=0.139  Sum_probs=107.0

Q ss_pred             eEEEEEeccCCceEEEEEEE----CCCCcEEEEEEEecC--hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeC-
Q 008813          416 YYVTEYLGSAAFSKVFQAQD----LHTGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL-  488 (552)
Q Consensus       416 Y~Ile~LGkG~FG~VykA~D----kktg~~VAVKIIk~s--k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~-  488 (552)
                      |++++.||+|+||.||+|..    ..+++.||+|.++..  ......+.+|+.+|+.++|      +||+++++++... 
T Consensus         6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h------~~i~~~~~~~~~~~   79 (284)
T cd05079           6 LKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYH------ENIVKYKGICTEDG   79 (284)
T ss_pred             hhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCC------CCeeeeeeEEecCC
Confidence            68899999999999999974    456889999998754  3344678899999999998      9999999998865 


Q ss_pred             -CEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          489 -EHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       489 -~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                       ..+++||||+.+ +|.+++.....     .+++..+..++.||+.||.|||++||+|++|++-
T Consensus        80 ~~~~~lv~e~~~g~~L~~~l~~~~~-----~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~  138 (284)
T cd05079          80 GNGIKLIMEFLPSGSLKEYLPRNKN-----KINLKQQLKYAVQICKGMDYLGSRQYVHRDLAAR  138 (284)
T ss_pred             CCceEEEEEccCCCCHHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHHCCeeecccchh
Confidence             678999999976 99999876532     2799999999999999999999999999999963

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.68  E-value=4.7e-16  Score=153.36  Aligned_cols=124  Identities=24%  Similarity=0.294  Sum_probs=109.3

Q ss_pred             eEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC-hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEEEEE
Q 008813          416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND-KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIV  494 (552)
Q Consensus       416 Y~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s-k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hLyIV  494 (552)
                      |++++.||+|+||.||++++..++..+++|.+... ......+.+|+++++.++|      +||+++++++...+..|+|
T Consensus         7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h------~~ii~~~~~~~~~~~~~~v   80 (282)
T cd06643           7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDH------PNIVKLLDAFYYENNLWIL   80 (282)
T ss_pred             HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCC------CCeeeEEEEEeeCCEEEEE
Confidence            67888999999999999999999999999998754 3345667889999999998      9999999999999999999


Q ss_pred             EecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          495 CELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       495 mEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      |||+.+ +|..++.....     ++++..+..++.||+.||.|||++||+|++|++-
T Consensus        81 ~e~~~~~~l~~~~~~~~~-----~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~  132 (282)
T cd06643          81 IEFCAGGAVDAVMLELER-----PLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAG  132 (282)
T ss_pred             EEecCCCcHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcc
Confidence            999987 78777765332     2899999999999999999999999999999863

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.68  E-value=5.6e-16  Score=155.02  Aligned_cols=124  Identities=20%  Similarity=0.247  Sum_probs=111.5

Q ss_pred             cCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC-hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEE
Q 008813          413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND-KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL  491 (552)
Q Consensus       413 ~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s-k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hL  491 (552)
                      .++|.+++.||+|+||.||++.+..++..||+|.+... ....+.+.+|+.+++.++|      |||+++++.+...+..
T Consensus        18 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h------p~i~~~~~~~~~~~~~   91 (293)
T cd06647          18 KKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKH------PNIVNYLDSYLVGDEL   91 (293)
T ss_pred             hhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCC------CCeeehhheeeeCCcE
Confidence            47899999999999999999999989999999998653 2234667899999999998      9999999999999999


Q ss_pred             EEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          492 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       492 yIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      |+||||+.+ +|.+++....       +++..+..++.||+.||.|||++||+|++|++
T Consensus        92 ~lv~e~~~~~~L~~~~~~~~-------l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p  143 (293)
T cd06647          92 WVVMEYLAGGSLTDVVTETC-------MDEGQIAAVCRECLQALEFLHSNQVIHRDIKS  143 (293)
T ss_pred             EEEEecCCCCcHHHHHhhcC-------CCHHHHHHHHHHHHHHHHHHHhCCEeeccCCH
Confidence            999999987 9999987543       78999999999999999999999999999986

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.68  E-value=1.1e-15  Score=151.63  Aligned_cols=128  Identities=21%  Similarity=0.156  Sum_probs=110.0

Q ss_pred             CceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC--hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeC--C
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL--E  489 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s--k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~--~  489 (552)
                      ++|+..+.||.|++|.||+|.+..+++.+|+|++...  ......+.+|+++++.++|      +||++++++|...  +
T Consensus         1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h------~~iv~~~~~~~~~~~~   74 (287)
T cd06621           1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKS------PYIVKYYGAFLDESSS   74 (287)
T ss_pred             CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCC------CCeeeeeeEEEccCCC
Confidence            4799999999999999999999999999999999754  2345678899999999998      9999999998654  4


Q ss_pred             EEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          490 HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       490 hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      .+|+||||+.+ +|.+++.......  ..+++..+..++.||+.||.|||+.+|+|.+|++
T Consensus        75 ~~~lv~e~~~~~~L~~~l~~~~~~~--~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~  133 (287)
T cd06621          75 SIGIAMEYCEGGSLDSIYKKVKKRG--GRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKP  133 (287)
T ss_pred             eEEEEEEecCCCCHHHHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCH
Confidence            79999999987 9998876533211  2389999999999999999999999999999975

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.68  E-value=5.8e-16  Score=152.75  Aligned_cols=131  Identities=15%  Similarity=0.162  Sum_probs=108.7

Q ss_pred             CceEEEEEeccCCceEEEEEEEC----CCCcEEEEEEEecC--hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEe
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDL----HTGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH  487 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dk----ktg~~VAVKIIk~s--k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~  487 (552)
                      ..|++.+.||+|+||+||+|...    ..++.||+|.++..  ......+.+|+.+++.++|      +||+++++++..
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h------~niv~~~~~~~~   78 (283)
T cd05090           5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHH------PNIVCLLGVVTQ   78 (283)
T ss_pred             hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCC------CCeeeEEEEEec
Confidence            46899999999999999999853    35678999999753  2234567899999999998      999999999999


Q ss_pred             CCEEEEEEecCCC-CHHHHHHhhccC-----------CCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          488 LEHLFIVCELLRA-NLYEFQKFNQES-----------GGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       488 ~~hLyIVmEll~G-sL~d~Lk~~~~~-----------g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      ..+.|+||||+.+ +|.+++......           .....+++..+..++.||+.||.|||+++|+|++||+-
T Consensus        79 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~  153 (283)
T cd05090          79 EQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAAR  153 (283)
T ss_pred             CCceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCeehhccccc
Confidence            9999999999987 999998643210           00123788999999999999999999999999999974

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.67  E-value=9.1e-16  Score=153.99  Aligned_cols=125  Identities=24%  Similarity=0.266  Sum_probs=112.0

Q ss_pred             cCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecCh-hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEE
Q 008813          413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK-DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL  491 (552)
Q Consensus       413 ~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk-~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hL  491 (552)
                      ..+|++.+.||.|+||.||++.+..+++.||||.+.... ...+.+.+|+.+++.++|      +||+++++++...+.+
T Consensus        18 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h------~~iv~~~~~~~~~~~~   91 (296)
T cd06655          18 KKKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKN------PNIVNFLDSFLVGDEL   91 (296)
T ss_pred             cceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCC------CceeeeeeeEecCceE
Confidence            368999999999999999999999999999999987542 234677899999999998      9999999999999999


Q ss_pred             EEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          492 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       492 yIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      |+||||+.+ +|..++....       +++.++..++.|++.||.|||++||+|.+|++-
T Consensus        92 ~lv~e~~~~~~L~~~~~~~~-------l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~  144 (296)
T cd06655          92 FVVMEYLAGGSLTDVVTETC-------MDEAQIAAVCRECLQALEFLHANQVIHRDIKSD  144 (296)
T ss_pred             EEEEEecCCCcHHHHHHhcC-------CCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHH
Confidence            999999987 8998886532       899999999999999999999999999999863

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.67  E-value=5.5e-16  Score=151.86  Aligned_cols=126  Identities=23%  Similarity=0.277  Sum_probs=109.8

Q ss_pred             ceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC--hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEEE
Q 008813          415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLF  492 (552)
Q Consensus       415 RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s--k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hLy  492 (552)
                      .|++++.||+|+||.||+|.+..+++.||||+++..  ......+.+|+.+++.+.+   .+++||+++++++.....+|
T Consensus         2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~---~~~~~vi~~~~~~~~~~~~~   78 (277)
T cd06917           2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQ---SQPPNITKYYGSYLKGPRLW   78 (277)
T ss_pred             hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhcc---CCCCCeeeEeeeeeeCCEEE
Confidence            377889999999999999999999999999998753  3345678899999999973   12299999999999999999


Q ss_pred             EEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          493 IVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       493 IVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      +||||+.+ +|.++++..       ++++..++.++.||+.||.|||++||+|.+|++-
T Consensus        79 lv~e~~~~~~L~~~~~~~-------~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~  130 (277)
T cd06917          79 IIMEYAEGGSVRTLMKAG-------PIAEKYISVIIREVLVALKYIHKVGVIHRDIKAA  130 (277)
T ss_pred             EEEecCCCCcHHHHHHcc-------CCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHH
Confidence            99999977 899988653       1899999999999999999999999999999863

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.67  E-value=5.9e-16  Score=152.52  Aligned_cols=131  Identities=18%  Similarity=0.188  Sum_probs=111.4

Q ss_pred             cCceEEEEEeccCCceEEEEEEECC-----CCcEEEEEEEecC--hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEE
Q 008813          413 AGRYYVTEYLGSAAFSKVFQAQDLH-----TGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYF  485 (552)
Q Consensus       413 ~~RY~Ile~LGkG~FG~VykA~Dkk-----tg~~VAVKIIk~s--k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F  485 (552)
                      .++|.+.+.||+|+||.||+|.+..     ++..||+|.++..  ......+.+|+.+++.++|      +||+++++++
T Consensus         5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~------~~i~~~~~~~   78 (277)
T cd05036           5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNH------QNIVRLIGVS   78 (277)
T ss_pred             HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCC------CCEeeEEEEE
Confidence            3579999999999999999999976     7788999988743  2223467889999999998      9999999999


Q ss_pred             EeCCEEEEEEecCCC-CHHHHHHhhccCC-CCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          486 YHLEHLFIVCELLRA-NLYEFQKFNQESG-GEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       486 ~~~~hLyIVmEll~G-sL~d~Lk~~~~~g-~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ...+..++||||+.+ +|.+++...+... ....+++..+..++.||+.||.|||+++|+|++|++
T Consensus        79 ~~~~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp  144 (277)
T cd05036          79 FERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAA  144 (277)
T ss_pred             ccCCCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccch
Confidence            999999999999976 9999998654211 112389999999999999999999999999999986

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.67  E-value=1.3e-15  Score=144.84  Aligned_cols=123  Identities=19%  Similarity=0.185  Sum_probs=111.6

Q ss_pred             ceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecCh---hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeC--C
Q 008813          415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL--E  489 (552)
Q Consensus       415 RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk---~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~--~  489 (552)
                      +|.+.+.||+|++|.||+|.+..+++.|++|++....   ...+.+.+|+.++++++|      +||+++++.+...  .
T Consensus         1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~------~~i~~~~~~~~~~~~~   74 (260)
T cd06606           1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQH------PNIVRYYGSERDEEKN   74 (260)
T ss_pred             CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCC------CCEeeEEEEEecCCCC
Confidence            5888899999999999999999999999999997653   346788899999999998      9999999999988  8


Q ss_pred             EEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          490 HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       490 hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      .+++|||++.+ +|.+++.....      +++..++.++.|++.||.|||+++++|.+|++
T Consensus        75 ~~~lv~e~~~~~~L~~~~~~~~~------~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p  129 (260)
T cd06606          75 TLNIFLEYVSGGSLSSLLKKFGK------LPEPVIRKYTRQILEGLAYLHSNGIVHRDIKG  129 (260)
T ss_pred             eEEEEEEecCCCcHHHHHHHcCC------CCHHHHHHHHHHHHHHHHHHHHCCccccCCCH
Confidence            99999999965 99999887642      89999999999999999999999999999975

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.67  E-value=4.9e-16  Score=151.80  Aligned_cols=126  Identities=18%  Similarity=0.185  Sum_probs=109.7

Q ss_pred             CceEEEEEeccCCceEEEEEEEC----CCCcEEEEEEEecChh--hHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEe
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDL----HTGVDVCLKIIKNDKD--FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH  487 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dk----ktg~~VAVKIIk~sk~--~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~  487 (552)
                      ..|++.+.||+|+||.||++...    .+++.+|||+++....  ....+.+|+++++.+.|      +||+++++++..
T Consensus         4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~------~~i~~~~~~~~~   77 (284)
T cd05038           4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDH------ENIVKYKGVCEK   77 (284)
T ss_pred             hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCC------CChheEEeeeec
Confidence            46788899999999999999854    3578999999986543  35678999999999998      999999999887


Q ss_pred             --CCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          488 --LEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       488 --~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                        ..++++||||+.+ +|.+++......     +++..+..++.||+.||.|||++||+|.+|++-
T Consensus        78 ~~~~~~~lv~e~~~~~~l~~~l~~~~~~-----~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~  138 (284)
T cd05038          78 PGGRSLRLIMEYLPSGSLRDYLQRHRDQ-----INLKRLLLFSSQICKGMDYLGSQRYIHRDLAAR  138 (284)
T ss_pred             CCCCceEEEEecCCCCCHHHHHHhCccc-----cCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHH
Confidence              5689999999976 999999875532     899999999999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.67  E-value=1.2e-15  Score=145.77  Aligned_cols=127  Identities=22%  Similarity=0.270  Sum_probs=113.0

Q ss_pred             ceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC---hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEE
Q 008813          415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL  491 (552)
Q Consensus       415 RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s---k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hL  491 (552)
                      +|.+.+.||.|+||.||++.+..+++.+++|++...   ......+.+|+++++.++|      +||+++++.+.....+
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~------~~~~~~~~~~~~~~~~   74 (258)
T cd08215           1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNH------PNIIKYYESFEEKGKL   74 (258)
T ss_pred             CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCC------CChhheEEEEecCCEE
Confidence            689999999999999999999999999999999764   2345678899999999998      9999999999999999


Q ss_pred             EEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          492 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       492 yIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ++|||++.+ +|.++++.....+  .++++..+..++.||+.||.|||++||+|.+|++
T Consensus        75 ~lv~e~~~~~~L~~~l~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~  131 (258)
T cd08215          75 CIVMEYADGGDLSQKIKKQKKEG--KPFPEEQILDWFVQLCLALKYLHSRKILHRDIKP  131 (258)
T ss_pred             EEEEEecCCCcHHHHHHHhhccC--CCcCHHHHHHHHHHHHHHHHHHHhCCEecccCCh
Confidence            999999987 9999998754211  2389999999999999999999999999999985

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.67  E-value=2.6e-16  Score=154.05  Aligned_cols=131  Identities=19%  Similarity=0.198  Sum_probs=111.0

Q ss_pred             CceEEEEEeccCCceEEEEEEECC-----CCcEEEEEEEecCh--hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEE
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLH-----TGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFY  486 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkk-----tg~~VAVKIIk~sk--~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~  486 (552)
                      .+|.+.+.||+|+||.||+|.+..     +++.||||+++...  ...+.+.+|+++|+.++|      +||+++++++.
T Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~------~~i~~~~~~~~   78 (280)
T cd05049           5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQH------ENIVKFYGVCT   78 (280)
T ss_pred             HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCC------CCchheeeEEe
Confidence            568899999999999999998753     35789999997642  235678899999999998      99999999999


Q ss_pred             eCCEEEEEEecCCC-CHHHHHHhhccC--------CCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          487 HLEHLFIVCELLRA-NLYEFQKFNQES--------GGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       487 ~~~hLyIVmEll~G-sL~d~Lk~~~~~--------g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      ....+++||||+.+ +|.++++.....        .....+++..+..++.||+.||.|||++||+|++|++-
T Consensus        79 ~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~  151 (280)
T cd05049          79 EGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLATR  151 (280)
T ss_pred             cCCCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeeccccccc
Confidence            99999999999987 999999865320        11123789999999999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.67  E-value=7e-16  Score=152.04  Aligned_cols=118  Identities=23%  Similarity=0.220  Sum_probs=104.2

Q ss_pred             eccCCceEEEEEEECCCCcEEEEEEEecCh----hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEEEEEEec
Q 008813          422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCEL  497 (552)
Q Consensus       422 LGkG~FG~VykA~Dkktg~~VAVKIIk~sk----~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hLyIVmEl  497 (552)
                      ||+|+||.||+|.+..+++.||+|++....    .....+.+|+++|+.++|      |||+++++.+...+++|+||||
T Consensus         1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~------~~i~~~~~~~~~~~~~~lv~e~   74 (277)
T cd05577           1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSS------RFIVSLAYAFETKDDLCLVMTL   74 (277)
T ss_pred             CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCC------CCEeeeeeEEecCCeEEEEEec
Confidence            699999999999999999999999997532    123456789999999997      9999999999999999999999


Q ss_pred             CCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          498 LRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       498 l~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      +.+ +|.+++.......    +++..++.++.||+.||.|||++||+|.+|++
T Consensus        75 ~~~~~L~~~l~~~~~~~----~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p  123 (277)
T cd05577          75 MNGGDLKYHIYNVGEPG----FPEARAIFYAAQIICGLEHLHQRRIVYRDLKP  123 (277)
T ss_pred             CCCCcHHHHHHHcCcCC----CCHHHHHHHHHHHHHHHHHHHhCCcccCCCCH
Confidence            987 9999988655322    89999999999999999999999999999985

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.67  E-value=8e-16  Score=148.70  Aligned_cols=124  Identities=15%  Similarity=0.163  Sum_probs=109.1

Q ss_pred             CceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEEEE
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFI  493 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hLyI  493 (552)
                      .+|++.+.||+|+||.||++.+. .++.+|+|+++........+.+|+++++.++|      +||+++++++......|+
T Consensus         4 ~~~~~~~~ig~g~~g~v~~~~~~-~~~~~~~k~~~~~~~~~~~~~~e~~~l~~l~~------~~i~~~~~~~~~~~~~~~   76 (256)
T cd05112           4 SELTLVQEIGSGQFGLVWLGYWL-EKRKVAIKTIREGAMSEEDFIEEAQVMMKLSH------PKLVQLYGVCTERSPICL   76 (256)
T ss_pred             hHeEEEeeecCcccceEEEEEEe-CCCeEEEEECCCCCCCHHHHHHHHHHHHhCCC------CCeeeEEEEEccCCceEE
Confidence            36889999999999999999885 46789999987654334578899999999998      999999999999999999


Q ss_pred             EEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          494 VCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       494 VmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ||||+.+ +|.++++....     ++++..++.++.|++.||.|||+++|+|.+|++
T Consensus        77 v~e~~~~~~L~~~~~~~~~-----~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p  128 (256)
T cd05112          77 VFEFMEHGCLSDYLRAQRG-----KFSQETLLGMCLDVCEGMAYLESSNVIHRDLAA  128 (256)
T ss_pred             EEEcCCCCcHHHHHHhCcc-----CCCHHHHHHHHHHHHHHHHHHHHCCcccccccc
Confidence            9999987 89998876542     278999999999999999999999999999986

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.67  E-value=3.2e-16  Score=151.04  Aligned_cols=119  Identities=17%  Similarity=0.183  Sum_probs=103.0

Q ss_pred             EEeccCCceEEEEEEECCCC----------cEEEEEEEecChhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCC
Q 008813          420 EYLGSAAFSKVFQAQDLHTG----------VDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE  489 (552)
Q Consensus       420 e~LGkG~FG~VykA~Dkktg----------~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~  489 (552)
                      ++||+|+||.||+|.+..++          ..+++|++.........+.+|+.+++.++|      +||+++++++.. .
T Consensus         1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~e~~~l~~l~h------~~i~~~~~~~~~-~   73 (259)
T cd05037           1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRDSLAFFETASLMSQLSH------KHLVKLYGVCVR-D   73 (259)
T ss_pred             CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhhHHHHHHHHHHHHcCCC------cchhheeeEEec-C
Confidence            47899999999999998766          358888877654335678899999999998      999999999988 7


Q ss_pred             EEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          490 HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       490 hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      ..++||||+.+ +|.++++....     .+++..+..++.||+.||.|||++||+|+|||+-
T Consensus        74 ~~~lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~  130 (259)
T cd05037          74 ENIMVEEYVKFGPLDVFLHREKN-----NVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGK  130 (259)
T ss_pred             CcEEEEEcCCCCcHHHHHHhhcc-----CCCHHHHHHHHHHHHHHHHHHhhCCeecccCccc
Confidence            78999999987 99999887553     2899999999999999999999999999999974

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.67  E-value=1e-15  Score=147.64  Aligned_cols=123  Identities=22%  Similarity=0.213  Sum_probs=112.4

Q ss_pred             ceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecCh--hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEEE
Q 008813          415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLF  492 (552)
Q Consensus       415 RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk--~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hLy  492 (552)
                      .|++.+.||+|++|.||+|.+..+++.|+||++....  .....+.+|+.+++.++|      +||+++++++...+.++
T Consensus         2 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~------~~i~~~~~~~~~~~~~~   75 (264)
T cd06623           2 DLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCES------PYVVKCYGAFYKEGEIS   75 (264)
T ss_pred             cceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCC------CCeeeEEEEEccCCeEE
Confidence            5889999999999999999999999999999987653  345778999999999998      99999999999999999


Q ss_pred             EEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHh-CCCeeeeccc
Q 008813          493 IVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFL-LLVIYFILFC  549 (552)
Q Consensus       493 IVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs-~gIIH~~L~~  549 (552)
                      +||||+.+ +|.+++.....      +++..++.++.||+.||.|||+ ++++|.+|++
T Consensus        76 lv~e~~~~~~L~~~l~~~~~------l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~  128 (264)
T cd06623          76 IVLEYMDGGSLADLLKKVGK------IPEPVLAYIARQILKGLDYLHTKRHIIHRDIKP  128 (264)
T ss_pred             EEEEecCCCcHHHHHHHcCC------CCHHHHHHHHHHHHHHHHHHhccCCCccCCCCH
Confidence            99999996 99999987532      8999999999999999999999 9999999986

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.67  E-value=6.5e-16  Score=157.33  Aligned_cols=134  Identities=20%  Similarity=0.298  Sum_probs=110.3

Q ss_pred             eecCceEEEEEeccCCceEEEEEEECC-------CCcEEEEEEEecC--hhhHHHHHHHHHHHHHh-cccCCCCCCCeeE
Q 008813          411 VIAGRYYVTEYLGSAAFSKVFQAQDLH-------TGVDVCLKIIKND--KDFFDQSLDEIKLLKLV-NKNDPADEHHILR  480 (552)
Q Consensus       411 vi~~RY~Ile~LGkG~FG~VykA~Dkk-------tg~~VAVKIIk~s--k~~~~~~lrEIkILk~L-~hhd~~d~pnIVr  480 (552)
                      +...||.+++.||+|+||.||+|++..       ....||+|+++..  ......+.+|+.+++++ +|      +||++
T Consensus         9 ~~~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h------~~iv~   82 (334)
T cd05100           9 LSRTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKH------KNIIN   82 (334)
T ss_pred             cCHhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCC------CCeee
Confidence            445689999999999999999998643       2246899988753  23356788999999999 55      99999


Q ss_pred             eEeEEEeCCEEEEEEecCCC-CHHHHHHhhccCC----------CCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          481 LYDYFYHLEHLFIVCELLRA-NLYEFQKFNQESG----------GEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       481 L~d~F~~~~hLyIVmEll~G-sL~d~Lk~~~~~g----------~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      +++++...+.+++||||+.+ +|.+++......+          ....++...+..++.||+.||.|||++||+|++|++
T Consensus        83 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp  162 (334)
T cd05100          83 LLGACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAA  162 (334)
T ss_pred             eeEEEccCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeecccccc
Confidence            99999999999999999977 9999998643210          112378889999999999999999999999999986


Q ss_pred             c
Q 008813          550 F  550 (552)
Q Consensus       550 ~  550 (552)
                      -
T Consensus       163 ~  163 (334)
T cd05100         163 R  163 (334)
T ss_pred             c
Confidence            3

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.67  E-value=8.3e-16  Score=152.08  Aligned_cols=133  Identities=20%  Similarity=0.247  Sum_probs=110.3

Q ss_pred             ecCceEEEEEeccCCceEEEEEEECCC-----CcEEEEEEEecC--hhhHHHHHHHHHHHHHh-cccCCCCCCCeeEeEe
Q 008813          412 IAGRYYVTEYLGSAAFSKVFQAQDLHT-----GVDVCLKIIKND--KDFFDQSLDEIKLLKLV-NKNDPADEHHILRLYD  483 (552)
Q Consensus       412 i~~RY~Ile~LGkG~FG~VykA~Dkkt-----g~~VAVKIIk~s--k~~~~~~lrEIkILk~L-~hhd~~d~pnIVrL~d  483 (552)
                      ..++|++.+.||+|+||.||++.+...     ...+|+|+++..  ......+.+|+.+++++ +|      +||+++++
T Consensus        10 ~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h------~~i~~~~~   83 (293)
T cd05053          10 PRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH------KNIINLLG   83 (293)
T ss_pred             CHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCC------CCeeeEEE
Confidence            346899999999999999999987643     378999998754  22335688999999999 56      99999999


Q ss_pred             EEEeCCEEEEEEecCCC-CHHHHHHhhccC----------CCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          484 YFYHLEHLFIVCELLRA-NLYEFQKFNQES----------GGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       484 ~F~~~~hLyIVmEll~G-sL~d~Lk~~~~~----------g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      ++...+.+++||||+.+ +|..+++.+...          .....+++..+..++.||+.||.|||+++|+|++|++-
T Consensus        84 ~~~~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~  161 (293)
T cd05053          84 VCTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAAR  161 (293)
T ss_pred             EEcCCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCcccccccee
Confidence            99999999999999876 999999754210          01123899999999999999999999999999999974

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.67  E-value=4.3e-16  Score=153.08  Aligned_cols=124  Identities=25%  Similarity=0.274  Sum_probs=110.4

Q ss_pred             eEEEEEeccCCceEEEEEEECCCCcEEEEEEEecCh---hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEEE
Q 008813          416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLF  492 (552)
Q Consensus       416 Y~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk---~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hLy  492 (552)
                      |++++.||.|++|.||+|.+..+++.||||++....   .....+.+|+.+++.++|      +||+++++++...+..|
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~------~~iv~~~~~~~~~~~~~   74 (283)
T cd07835           1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNH------PNIVRLLDVVHSENKLY   74 (283)
T ss_pred             CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCC------CCccCHhheeccCCeEE
Confidence            677899999999999999999999999999987542   233567889999999998      99999999999999999


Q ss_pred             EEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          493 IVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       493 IVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      +||||++++|.+++......    .+++..++.++.||+.||.|||+++|+|.+|++
T Consensus        75 iv~e~~~~~l~~~~~~~~~~----~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p  127 (283)
T cd07835          75 LVFEFLDLDLKKYMDSSPLT----GLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKP  127 (283)
T ss_pred             EEEeccCcCHHHHHhhCCCC----CCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCH
Confidence            99999988999998765522    289999999999999999999999999999985

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.67  E-value=7.1e-16  Score=151.97  Aligned_cols=122  Identities=19%  Similarity=0.229  Sum_probs=108.8

Q ss_pred             ceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC--hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEEE
Q 008813          415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLF  492 (552)
Q Consensus       415 RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s--k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hLy  492 (552)
                      -|++++.||.|+||.||+|.+..+++.||||++...  ......+.+|+++++.++|      +||+++++++....++|
T Consensus         5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h------~~iv~~~~~~~~~~~~~   78 (277)
T cd06641           5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDS------PYVTKYYGSYLKDTKLW   78 (277)
T ss_pred             hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCC------CCEeEEEEEEEeCCeEE
Confidence            377888999999999999999989999999998653  2344678899999999998      99999999999999999


Q ss_pred             EEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          493 IVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       493 IVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      +||||+.+ +|.+++....       +++..+..++.|++.||.|||+++|+|.+|++
T Consensus        79 lv~e~~~~~~l~~~i~~~~-------~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p  129 (277)
T cd06641          79 IIMEYLGGGSALDLLEPGP-------LDETQIATILREILKGLDYLHSEKKIHRDIKA  129 (277)
T ss_pred             EEEEeCCCCcHHHHHhcCC-------CCHHHHHHHHHHHHHHHHHHccCCeecCCCCH
Confidence            99999987 8998886432       89999999999999999999999999999985

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.67  E-value=8.1e-16  Score=151.44  Aligned_cols=126  Identities=16%  Similarity=0.221  Sum_probs=109.2

Q ss_pred             cCceEEEEEeccCCceEEEEEEECCCCc----EEEEEEEecCh--hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEE
Q 008813          413 AGRYYVTEYLGSAAFSKVFQAQDLHTGV----DVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFY  486 (552)
Q Consensus       413 ~~RY~Ile~LGkG~FG~VykA~Dkktg~----~VAVKIIk~sk--~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~  486 (552)
                      ..+|++.+.||+|+||.||+|.++.+++    .+|+|+++...  .....+.+|+.+++.++|      +||+++++++.
T Consensus         6 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h------~~i~~~~~~~~   79 (279)
T cd05057           6 ETELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDH------PHVVRLLGICL   79 (279)
T ss_pred             HHHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCC------CCcceEEEEEe
Confidence            3679999999999999999999876654    58999887652  334678899999999998      99999999988


Q ss_pred             eCCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          487 HLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       487 ~~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      . ..+++||||+.+ +|.+++..+...     +++..+..++.||+.||.|||+++|+|.+|++-
T Consensus        80 ~-~~~~~v~e~~~~g~L~~~l~~~~~~-----~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~  138 (279)
T cd05057          80 S-SQVQLITQLMPLGCLLDYVRNHKDN-----IGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAAR  138 (279)
T ss_pred             c-CceEEEEecCCCCcHHHHHHhccCC-----CCHHHHHHHHHHHHHHHHHHHhCCEEecccCcc
Confidence            7 789999999876 999999875432     899999999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.67  E-value=5.6e-16  Score=148.61  Aligned_cols=123  Identities=21%  Similarity=0.297  Sum_probs=109.2

Q ss_pred             EEEEEeccCCceEEEEEEECCCC----cEEEEEEEecChh--hHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCE
Q 008813          417 YVTEYLGSAAFSKVFQAQDLHTG----VDVCLKIIKNDKD--FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH  490 (552)
Q Consensus       417 ~Ile~LGkG~FG~VykA~Dkktg----~~VAVKIIk~sk~--~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~h  490 (552)
                      ++.+.||.|+||.||+|++...+    ..||+|+++....  ..+.+..|+.+++.++|      +||+++++++...+.
T Consensus         2 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~------~~i~~~~~~~~~~~~   75 (258)
T smart00219        2 TLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDH------PNIVKLLGVCTEEEP   75 (258)
T ss_pred             cccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCC------CchheEEEEEcCCCe
Confidence            56789999999999999998766    8899999976532  45788899999999987      999999999999999


Q ss_pred             EEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          491 LFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       491 LyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      .+++||++.+ +|.++++......    +++..+..++.||+.||.|||+++|+|.+|++
T Consensus        76 ~~~i~e~~~~~~l~~~~~~~~~~~----~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~  131 (258)
T smart00219       76 LMIVMEYMEGGDLLDYLRKNRPKE----LSLSDLLSFALQIARGMEYLESKNFIHRDLAA  131 (258)
T ss_pred             eEEEEeccCCCCHHHHHHhhhhcc----CCHHHHHHHHHHHHHHHHHHhcCCeeeccccc
Confidence            9999999987 9999998655322    79999999999999999999999999999986

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.67  E-value=4.6e-16  Score=152.90  Aligned_cols=131  Identities=16%  Similarity=0.135  Sum_probs=110.5

Q ss_pred             CceEEEEEeccCCceEEEEEEECCCC-----cEEEEEEEecC--hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEE
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLHTG-----VDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFY  486 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkktg-----~~VAVKIIk~s--k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~  486 (552)
                      .+|++++.||+|+||.||+|.+...+     +.||+|.++..  ......+.+|+.+++.++|      +||+++++++.
T Consensus         5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h------~~i~~~~~~~~   78 (283)
T cd05048           5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQH------PNIVCLLGVCT   78 (283)
T ss_pred             HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCC------cccceEEEEEc
Confidence            46899999999999999999876554     67999998754  2344668899999999998      99999999999


Q ss_pred             eCCEEEEEEecCCC-CHHHHHHhhccCC----------CCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          487 HLEHLFIVCELLRA-NLYEFQKFNQESG----------GEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       487 ~~~hLyIVmEll~G-sL~d~Lk~~~~~g----------~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      ..+..|++|||+.+ +|.+++.......          ....+++..++.++.||+.||.|||+++|+|++||+-
T Consensus        79 ~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~  153 (283)
T cd05048          79 KEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAAR  153 (283)
T ss_pred             CCCceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccc
Confidence            99999999999986 9999998653210          0123889999999999999999999999999999973

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=99.67  E-value=8.2e-16  Score=153.83  Aligned_cols=124  Identities=15%  Similarity=0.200  Sum_probs=102.7

Q ss_pred             EEEeccCCceEEEEEEECC--CCcEEEEEEEecChhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEe--CCEEEEE
Q 008813          419 TEYLGSAAFSKVFQAQDLH--TGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH--LEHLFIV  494 (552)
Q Consensus       419 le~LGkG~FG~VykA~Dkk--tg~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~--~~hLyIV  494 (552)
                      ..+||+|+||.||+|.++.  +++.||+|.+.... ....+.+|+.+|+.++|      +||+++++++..  ...+|+|
T Consensus         6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~-~~~~~~~E~~~l~~l~h------~niv~~~~~~~~~~~~~~~lv   78 (317)
T cd07867           6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG-ISMSACREIALLRELKH------PNVIALQKVFLSHSDRKVWLL   78 (317)
T ss_pred             ceEeccCCCeeEEEEEecCCCccceEEEEEecCCC-CcHHHHHHHHHHHhCCC------CCeeeEEEEEeccCCCeEEEE
Confidence            3689999999999999653  66889999987543 23457899999999998      999999999864  5689999


Q ss_pred             EecCCCCHHHHHHhhccC---CCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          495 CELLRANLYEFQKFNQES---GGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       495 mEll~GsL~d~Lk~~~~~---g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      |||++++|.+++......   .....+++..++.++.||+.||.|||+++|||+|||+
T Consensus        79 ~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp  136 (317)
T cd07867          79 FDYAEHDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKP  136 (317)
T ss_pred             EeeeCCcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCH
Confidence            999999999988643211   1112388999999999999999999999999999986

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.67  E-value=1.2e-15  Score=146.55  Aligned_cols=127  Identities=22%  Similarity=0.212  Sum_probs=109.5

Q ss_pred             ceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC---hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEe--CC
Q 008813          415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH--LE  489 (552)
Q Consensus       415 RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s---k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~--~~  489 (552)
                      +|++++.||.|+||.||++.+..+++.||+|++...   ....+.+..|+.+++.++|      +||+++++++..  ..
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~------~~i~~~~~~~~~~~~~   74 (265)
T cd08217           1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKH------PNIVRYYDRIIDRSNQ   74 (265)
T ss_pred             CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCC------CccceeeeeeecCCCC
Confidence            488999999999999999999999999999998753   3344678889999999998      999999998864  46


Q ss_pred             EEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHH-----hCCCeeeeccc
Q 008813          490 HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIF-----LLLVIYFILFC  549 (552)
Q Consensus       490 hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLH-----s~gIIH~~L~~  549 (552)
                      .+|++|||+.+ +|.++++......  .++++..++.++.||+.||.|||     +.+|+|.+|++
T Consensus        75 ~~~~~~e~~~~~~L~~~l~~~~~~~--~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p  138 (265)
T cd08217          75 TLYIVMEYCEGGDLAQLIQKCKKER--KYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKP  138 (265)
T ss_pred             EEEEEehhccCCCHHHHHHHHhhcc--cCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCH
Confidence            78999999987 9999998653211  23899999999999999999999     89999999986

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=99.67  E-value=8.3e-16  Score=157.97  Aligned_cols=126  Identities=25%  Similarity=0.292  Sum_probs=109.6

Q ss_pred             ecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC---hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeC
Q 008813          412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL  488 (552)
Q Consensus       412 i~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s---k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~  488 (552)
                      +.+||.+++.||+|+||.||+|.+..+++.||||++...   ....+.+.+|+.+++.++|      +||+++++++...
T Consensus        15 ~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h------~~iv~~~~~~~~~   88 (345)
T cd07877          15 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH------ENVIGLLDVFTPA   88 (345)
T ss_pred             ccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCC------Ccccceeeeeeec
Confidence            457899999999999999999999999999999998753   2224567789999999998      9999999988643


Q ss_pred             ------CEEEEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          489 ------EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       489 ------~hLyIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                            ..+|+++++++++|.++++...       +++..++.++.||+.||.|||++||+|++|++-
T Consensus        89 ~~~~~~~~~~lv~~~~~~~L~~~~~~~~-------l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~  149 (345)
T cd07877          89 RSLEEFNDVYLVTHLMGADLNNIVKCQK-------LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPS  149 (345)
T ss_pred             ccccccccEEEEehhcccCHHHHHhcCC-------CCHHHHHHHHHHHHHHHHHHHHCCeeecCCChH
Confidence                  4589999999889998876532       899999999999999999999999999999863

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.67  E-value=7.1e-16  Score=150.37  Aligned_cols=128  Identities=16%  Similarity=0.165  Sum_probs=104.0

Q ss_pred             EEEEEeccCCceEEEEEEECCCCc--EEEEEEEecC---hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeC---
Q 008813          417 YVTEYLGSAAFSKVFQAQDLHTGV--DVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL---  488 (552)
Q Consensus       417 ~Ile~LGkG~FG~VykA~Dkktg~--~VAVKIIk~s---k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~---  488 (552)
                      .+.+.||+|+||.||+|++..++.  .||||.++..   ....+.+.+|+.+++.++|      +||+++++++...   
T Consensus         2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h------~~iv~~~~~~~~~~~~   75 (272)
T cd05075           2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDH------PNVMRLIGVCLQTVES   75 (272)
T ss_pred             ccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCC------CCcceEEEEEccCCcc
Confidence            466899999999999999887765  5899988753   3345678899999999998      9999999976432   


Q ss_pred             ---CEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          489 ---EHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       489 ---~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                         ...++||||+.+ +|.+++...........+++..+..++.||+.||.|||+++|||+|||+-
T Consensus        76 ~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~  141 (272)
T cd05075          76 EGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAAR  141 (272)
T ss_pred             cCCCCcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchh
Confidence               357999999986 99998864332111234899999999999999999999999999999973

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.67  E-value=1.2e-15  Score=149.09  Aligned_cols=123  Identities=19%  Similarity=0.227  Sum_probs=108.0

Q ss_pred             ceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC------hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEe-
Q 008813          415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND------KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH-  487 (552)
Q Consensus       415 RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s------k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~-  487 (552)
                      .|++.+.||+|+||.||+|.+..+++.||+|+++..      ......+.+|+.+++.++|      +||+++++++.. 
T Consensus         3 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h------~~i~~~~~~~~~~   76 (266)
T cd06651           3 NWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQH------ERIVQYYGCLRDR   76 (266)
T ss_pred             CccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCC------CCeeeEEEEEEcC
Confidence            488899999999999999999999999999998643      1234567889999999998      999999999875 


Q ss_pred             -CCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          488 -LEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       488 -~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                       ...++++||++.+ +|.+++.....      +++..++.++.||+.||.|||+++|+|.+|++
T Consensus        77 ~~~~~~l~~e~~~~~~L~~~l~~~~~------l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p  134 (266)
T cd06651          77 AEKTLTIFMEYMPGGSVKDQLKAYGA------LTESVTRKYTRQILEGMSYLHSNMIVHRDIKG  134 (266)
T ss_pred             CCCEEEEEEeCCCCCcHHHHHHHcCC------CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCH
Confidence             3678999999987 89999876543      88999999999999999999999999999986

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.67  E-value=7.6e-17  Score=174.93  Aligned_cols=124  Identities=19%  Similarity=0.253  Sum_probs=114.3

Q ss_pred             cCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChh-hHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEE
Q 008813          413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD-FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL  491 (552)
Q Consensus       413 ~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~-~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hL  491 (552)
                      ..+|....+||+|+-|.||.|....+++.||||.+..... ..+.+++|+.+|+.++|      +|||++++.|...+.+
T Consensus       272 ~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H------~NiVnfl~Sylv~deL  345 (550)
T KOG0578|consen  272 RSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHH------PNIVNFLDSYLVGDEL  345 (550)
T ss_pred             hhhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccc------hHHHHHHHHhccccee
Confidence            4578889999999999999999999999999999987643 34678899999999999      9999999999999999


Q ss_pred             EEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          492 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       492 yIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      |+|||||+| +|.+++....       ++|.+|..|+++++.||.|||.+||||+|||-
T Consensus       346 WVVMEym~ggsLTDvVt~~~-------~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKS  397 (550)
T KOG0578|consen  346 WVVMEYMEGGSLTDVVTKTR-------MTEGQIAAICREILQGLKFLHARGIIHRDIKS  397 (550)
T ss_pred             EEEEeecCCCchhhhhhccc-------ccHHHHHHHHHHHHHHHHHHHhcceeeecccc
Confidence            999999998 9999998765       89999999999999999999999999999984

>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.67  E-value=6.4e-17  Score=156.16  Aligned_cols=124  Identities=24%  Similarity=0.228  Sum_probs=113.1

Q ss_pred             ceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC---hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEE
Q 008813          415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL  491 (552)
Q Consensus       415 RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s---k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hL  491 (552)
                      .|.-.++||+|.||+||+|+.+.+++.||+|.++..   ...-..+++||.+|+.|+|      .|||++++.....+.+
T Consensus         3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkh------knivrl~dvlhsdkkl   76 (292)
T KOG0662|consen    3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKH------KNIVRLHDVLHSDKKL   76 (292)
T ss_pred             chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhh------cceeehhhhhccCcee
Confidence            455668999999999999999999999999999875   3344678999999999999      8999999999999999


Q ss_pred             EEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          492 FIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       492 yIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      -+|+|||..+|..+.......     +....++.++.|++.||.|+|+++++|+|||+
T Consensus        77 tlvfe~cdqdlkkyfdslng~-----~d~~~~rsfmlqllrgl~fchshnvlhrdlkp  129 (292)
T KOG0662|consen   77 TLVFEFCDQDLKKYFDSLNGD-----LDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKP  129 (292)
T ss_pred             EEeHHHhhHHHHHHHHhcCCc-----CCHHHHHHHHHHHHhhhhhhhhhhhhhccCCc
Confidence            999999999999999876542     89999999999999999999999999999997

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.67  E-value=5.6e-16  Score=153.66  Aligned_cols=127  Identities=20%  Similarity=0.245  Sum_probs=109.2

Q ss_pred             ecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecCh---hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeC
Q 008813          412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL  488 (552)
Q Consensus       412 i~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk---~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~  488 (552)
                      ..++|++.+.||.|+||.||+|.++.+++.+|||++....   .....+.+|+++++.++|      +||+++++++...
T Consensus         6 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h------~~i~~~~~~~~~~   79 (311)
T cd07866           6 KLRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKH------PNVVPLIDMAVER   79 (311)
T ss_pred             ccccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCC------CCccchhhheecc
Confidence            3578999999999999999999999999999999986531   123456789999999998      9999999988543


Q ss_pred             --------CEEEEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          489 --------EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       489 --------~hLyIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                              ..+++||||+.++|...+.....     .+++..++.++.||+.||.|||++||+|.+|++
T Consensus        80 ~~~~~~~~~~~~lv~~~~~~~l~~~~~~~~~-----~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p  143 (311)
T cd07866          80 PDKSKRKRGSVYMVTPYMDHDLSGLLENPSV-----KLTESQIKCYMLQLLEGINYLHENHILHRDIKA  143 (311)
T ss_pred             cccccccCceEEEEEecCCcCHHHHHhcccc-----CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCH
Confidence                    35799999999998888775432     289999999999999999999999999999986

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.67  E-value=6.8e-16  Score=151.26  Aligned_cols=123  Identities=20%  Similarity=0.224  Sum_probs=111.1

Q ss_pred             CceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC--hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEE
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL  491 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s--k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hL  491 (552)
                      +||++.+.||.|+||.||+|.+..+++.||+|++...  ......+.+|+.+++.++|      +||+++++++.....+
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h------~~i~~~~~~~~~~~~~   74 (274)
T cd06609           1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRS------PYITKYYGSFLKGSKL   74 (274)
T ss_pred             ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCC------CCeeeeeEEEEECCeE
Confidence            4789999999999999999999999999999998764  2234567899999999998      9999999999999999


Q ss_pred             EEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          492 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       492 yIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      |+|+||+.+ +|.+++....       +++..++.++.|++.||.|||+++|+|.+|++
T Consensus        75 ~~v~e~~~~~~L~~~~~~~~-------~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p  126 (274)
T cd06609          75 WIIMEYCGGGSCLDLLKPGK-------LDETYIAFILREVLLGLEYLHEEGKIHRDIKA  126 (274)
T ss_pred             EEEEEeeCCCcHHHHHhhcC-------CCHHHHHHHHHHHHHHHHHHHhCCcccCCCCH
Confidence            999999987 9999988641       89999999999999999999999999999985

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.66  E-value=1.5e-16  Score=155.12  Aligned_cols=120  Identities=16%  Similarity=0.218  Sum_probs=102.8

Q ss_pred             EEeccCCceEEEEEEECCCCc-------EEEEEEEecC-hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEE
Q 008813          420 EYLGSAAFSKVFQAQDLHTGV-------DVCLKIIKND-KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL  491 (552)
Q Consensus       420 e~LGkG~FG~VykA~Dkktg~-------~VAVKIIk~s-k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hL  491 (552)
                      +.||+|+||.||+|.+...+.       .+|+|++... ....+.+..|+.+++.+.|      +||+++++++....+.
T Consensus         1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h------~~iv~~~~~~~~~~~~   74 (258)
T cd05078           1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSH------KHLVLNYGVCVCGDES   74 (258)
T ss_pred             CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCC------CChhheeeEEEeCCCc
Confidence            368999999999999865443       4888888654 2334667889999999998      9999999999999999


Q ss_pred             EEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          492 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       492 yIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      ++||||+.+ +|.++++.++..     +++..++.++.||+.||.|||++||+|++||+-
T Consensus        75 ~lv~e~~~~g~L~~~l~~~~~~-----~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~  129 (258)
T cd05078          75 IMVQEYVKFGSLDTYLKKNKNL-----INISWKLEVAKQLAWALHFLEDKGLTHGNVCAK  129 (258)
T ss_pred             EEEEecCCCCcHHHHHhcCCCC-----CCHHHHHHHHHHHHHHHHHHHHCCeecCCCccc
Confidence            999999987 899999865432     899999999999999999999999999999974

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=99.66  E-value=5.2e-16  Score=174.76  Aligned_cols=127  Identities=20%  Similarity=0.260  Sum_probs=111.0

Q ss_pred             CceEEEEEeccCCceEEEEEEECCCCcEEEEEEEe-cChhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEE-EeC---
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIK-NDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYF-YHL---  488 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk-~sk~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F-~~~---  488 (552)
                      .+++|.++|.+|||+.||+|++...+..||+|.+- +++...+.+.+||.+|+.|+.|     +|||.++|.. ...   
T Consensus        37 ~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh-----~nIV~yidss~~~~~~~  111 (738)
T KOG1989|consen   37 HRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGH-----KNIVSYIDSSAINRSSN  111 (738)
T ss_pred             EEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCC-----CceeeEeccccccccCC
Confidence            57899999999999999999999988899998764 3566678899999999999976     9999999943 211   


Q ss_pred             ---CEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCC--Ceeeeccc
Q 008813          489 ---EHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLL--VIYFILFC  549 (552)
Q Consensus       489 ---~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~g--IIH~~L~~  549 (552)
                         -.++|+||||.| .|-+++..+...+    |++.+|+.|+.|+++|+.+||.++  |||||||.
T Consensus       112 ~~~~EvllLmEyC~gg~Lvd~mn~Rlq~~----lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKi  174 (738)
T KOG1989|consen  112 NGVWEVLLLMEYCKGGSLVDFMNTRLQTR----LTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKI  174 (738)
T ss_pred             CceeEEEeehhhccCCcHHHHHHHHHhcc----CChHHHHHHHHHHHHHHHHHhcCCCccchhhhhh
Confidence               358999999995 9999999776554    999999999999999999999998  99999994

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.66  E-value=1.4e-15  Score=148.52  Aligned_cols=120  Identities=16%  Similarity=0.158  Sum_probs=106.1

Q ss_pred             EEeccCCceEEEEEEECCCCcEEEEEEEecC-hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEEEEEEecC
Q 008813          420 EYLGSAAFSKVFQAQDLHTGVDVCLKIIKND-KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCELL  498 (552)
Q Consensus       420 e~LGkG~FG~VykA~Dkktg~~VAVKIIk~s-k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hLyIVmEll  498 (552)
                      ..||+|+||.||+|.+..++..||+|.+... ....+.+.+|+.+++.++|      +||+++++++...+++++|||++
T Consensus        14 ~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h------~~iv~~~~~~~~~~~~~lv~e~~   87 (268)
T cd06624          14 VVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKH------RNIVQYLGSDSENGFFKIFMEQV   87 (268)
T ss_pred             EEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCC------CCeeeeeeeeccCCEEEEEEecC
Confidence            4799999999999999999999999988754 2334678899999999998      99999999999999999999999


Q ss_pred             CC-CHHHHHHhhccCCCCcCC--CHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          499 RA-NLYEFQKFNQESGGEAYF--TLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       499 ~G-sL~d~Lk~~~~~g~~~pL--Se~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      .+ +|.+++......     +  ++..++.++.||+.||.|||++||+|++|++-
T Consensus        88 ~~~~L~~~l~~~~~~-----~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~  137 (268)
T cd06624          88 PGGSLSALLRSKWGP-----LKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGD  137 (268)
T ss_pred             CCCCHHHHHHHhccc-----CCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHH
Confidence            87 999999865321     4  78889999999999999999999999999864

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=99.66  E-value=1.2e-15  Score=150.24  Aligned_cols=126  Identities=17%  Similarity=0.184  Sum_probs=107.1

Q ss_pred             cCceEEEEEeccCCceEEEEEEECCCCc----EEEEEEEecC--hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEE
Q 008813          413 AGRYYVTEYLGSAAFSKVFQAQDLHTGV----DVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFY  486 (552)
Q Consensus       413 ~~RY~Ile~LGkG~FG~VykA~Dkktg~----~VAVKIIk~s--k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~  486 (552)
                      ..+|+++++||+|+||.||+|.+..+++    .||||+++..  ......+.+|+.+++.++|      +||+++++++.
T Consensus         6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~------~~i~~~~~~~~   79 (279)
T cd05109           6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGS------PYVCRLLGICL   79 (279)
T ss_pred             hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCC------CCCceEEEEEc
Confidence            3579999999999999999999876665    4899998753  3344678899999999998      99999999887


Q ss_pred             eCCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          487 HLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       487 ~~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      . ...+++||++.+ +|.++++.+..     .+++..+..++.||+.||.|||+++|||++||+-
T Consensus        80 ~-~~~~l~~~~~~~g~l~~~l~~~~~-----~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~  138 (279)
T cd05109          80 T-STVQLVTQLMPYGCLLDYVRENKD-----RIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAAR  138 (279)
T ss_pred             C-CCcEEEEEcCCCCCHHHHHhhccC-----CCCHHHHHHHHHHHHHHHHHHHHCCeeccccccc
Confidence            5 457899999876 99999886542     2899999999999999999999999999999974

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.66  E-value=4.9e-16  Score=150.60  Aligned_cols=124  Identities=20%  Similarity=0.144  Sum_probs=111.8

Q ss_pred             ceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC--hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEEE
Q 008813          415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLF  492 (552)
Q Consensus       415 RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s--k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hLy  492 (552)
                      +|++.+.||.|+||.||++.++.+++.+|+|++...  ......+.+|+.+++.+.|      +||+++++.+...+.++
T Consensus         2 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~------~~i~~~~~~~~~~~~~~   75 (265)
T cd06605           2 DLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNS------PYIVGFYGAFYNNGDIS   75 (265)
T ss_pred             cchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCC------CchhhhheeeecCCEEE
Confidence            578889999999999999999999999999998765  3345678899999999997      99999999999999999


Q ss_pred             EEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHh-CCCeeeeccc
Q 008813          493 IVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFL-LLVIYFILFC  549 (552)
Q Consensus       493 IVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs-~gIIH~~L~~  549 (552)
                      +|||++.+ +|.+++.....     ++++..+..++.|++.||.|||+ .+|+|.+|++
T Consensus        76 lv~e~~~~~~L~~~~~~~~~-----~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~  129 (265)
T cd06605          76 ICMEYMDGGSLDKILKEVQG-----RIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKP  129 (265)
T ss_pred             EEEEecCCCcHHHHHHHccC-----CCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCH
Confidence            99999996 99999987532     28999999999999999999999 9999999986

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=99.66  E-value=4.5e-16  Score=167.85  Aligned_cols=125  Identities=23%  Similarity=0.287  Sum_probs=109.6

Q ss_pred             ceEE--EEEeccCCceEEEEEEECCCCcEEEEEEEecC---hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCC
Q 008813          415 RYYV--TEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE  489 (552)
Q Consensus       415 RY~I--le~LGkG~FG~VykA~Dkktg~~VAVKIIk~s---k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~  489 (552)
                      -|+|  .+.||.|-||.||-|.++++|+.||||+|.+.   .+.-.++.+|+.||+.+.|      |+||.|.-.|++.+
T Consensus       563 vYQif~devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~H------PGiV~le~M~ET~e  636 (888)
T KOG4236|consen  563 VYQIFADEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHH------PGIVNLECMFETPE  636 (888)
T ss_pred             HHHhhhHhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCC------CCeeEEEEeecCCc
Confidence            3544  46899999999999999999999999999763   3334788999999999999      99999999999999


Q ss_pred             EEEEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          490 HLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       490 hLyIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      .++.|||-+.|++.+.|-......    |++...+.++.||+.||+|||.++|||-|||+
T Consensus       637 rvFVVMEKl~GDMLEMILSsEkgR----L~er~TkFlvtQIL~ALr~LH~knIvHCDLKP  692 (888)
T KOG4236|consen  637 RVFVVMEKLHGDMLEMILSSEKGR----LPERITKFLVTQILVALRYLHFKNIVHCDLKP  692 (888)
T ss_pred             eEEEEehhhcchHHHHHHHhhccc----chHHHHHHHHHHHHHHHHHhhhcceeeccCCc
Confidence            999999999998777665433211    99999999999999999999999999999996

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.66  E-value=8.9e-16  Score=151.81  Aligned_cols=132  Identities=15%  Similarity=0.124  Sum_probs=110.8

Q ss_pred             cCceEEEEEeccCCceEEEEEEECC-----CCcEEEEEEEecC--hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEE
Q 008813          413 AGRYYVTEYLGSAAFSKVFQAQDLH-----TGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYF  485 (552)
Q Consensus       413 ~~RY~Ile~LGkG~FG~VykA~Dkk-----tg~~VAVKIIk~s--k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F  485 (552)
                      ..+|++.+.||+|+||.||+|.+..     ++..||||++...  ......+.+|+.+++.++|      +||+++++++
T Consensus         4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h------~~iv~~~~~~   77 (288)
T cd05050           4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDH------PNIVKLLGVC   77 (288)
T ss_pred             hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCC------CchheEEEEE
Confidence            3579999999999999999998753     6788999998754  2334668899999999998      9999999999


Q ss_pred             EeCCEEEEEEecCCC-CHHHHHHhhccC----------------CCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecc
Q 008813          486 YHLEHLFIVCELLRA-NLYEFQKFNQES----------------GGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILF  548 (552)
Q Consensus       486 ~~~~hLyIVmEll~G-sL~d~Lk~~~~~----------------g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~  548 (552)
                      ....++|+||||+.+ +|.+++......                .....+++..+..++.||+.||.|||+++|+|++|+
T Consensus        78 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~  157 (288)
T cd05050          78 AVGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLA  157 (288)
T ss_pred             cCCCccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCeeccccc
Confidence            999999999999987 999999754210                011237888999999999999999999999999998


Q ss_pred             cc
Q 008813          549 CF  550 (552)
Q Consensus       549 ~~  550 (552)
                      +-
T Consensus       158 p~  159 (288)
T cd05050         158 TR  159 (288)
T ss_pred             Hh
Confidence            63

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=99.66  E-value=4.5e-16  Score=160.13  Aligned_cols=136  Identities=20%  Similarity=0.199  Sum_probs=109.4

Q ss_pred             ceecCceEEEEEeccCCceEEEEEEEC-----CCCcEEEEEEEecC--hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeE
Q 008813          410 TVIAGRYYVTEYLGSAAFSKVFQAQDL-----HTGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLY  482 (552)
Q Consensus       410 dvi~~RY~Ile~LGkG~FG~VykA~Dk-----ktg~~VAVKIIk~s--k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~  482 (552)
                      .+..+||++++.||+|+||.||+|.+.     .+++.||+|+++..  ....+.+.+|+.+++++.+|     +||++++
T Consensus         3 ~~~~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h-----~niv~~~   77 (337)
T cd05054           3 EFPRDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHH-----LNVVNLL   77 (337)
T ss_pred             ccCHHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccC-----cchhhee
Confidence            345579999999999999999999754     34578999998753  22345678999999999443     9999999


Q ss_pred             eEEEeC-CEEEEEEecCCC-CHHHHHHhhccCC-----------------------------------------------
Q 008813          483 DYFYHL-EHLFIVCELLRA-NLYEFQKFNQESG-----------------------------------------------  513 (552)
Q Consensus       483 d~F~~~-~hLyIVmEll~G-sL~d~Lk~~~~~g-----------------------------------------------  513 (552)
                      +++... ..+++||||+.+ +|.+++.......                                               
T Consensus        78 ~~~~~~~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (337)
T cd05054          78 GACTKPGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVE  157 (337)
T ss_pred             eeEecCCCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcc
Confidence            988754 678999999987 9999987543110                                               


Q ss_pred             --------CCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          514 --------GEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       514 --------~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                              ...++++..+..++.||+.||.|||+++|+|+|||+-
T Consensus       158 ~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~  202 (337)
T cd05054         158 EDEEGDELYKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAAR  202 (337)
T ss_pred             cchhhhHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcc
Confidence                    0014889999999999999999999999999999963

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.66  E-value=1.3e-15  Score=152.30  Aligned_cols=134  Identities=20%  Similarity=0.324  Sum_probs=109.9

Q ss_pred             eecCceEEEEEeccCCceEEEEEEEC-------CCCcEEEEEEEecC--hhhHHHHHHHHHHHHHhcccCCCCCCCeeEe
Q 008813          411 VIAGRYYVTEYLGSAAFSKVFQAQDL-------HTGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRL  481 (552)
Q Consensus       411 vi~~RY~Ile~LGkG~FG~VykA~Dk-------ktg~~VAVKIIk~s--k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL  481 (552)
                      +...+|.+.+.||+|+||.||+|++.       ..+..||+|+++..  ......+.+|+.+++.+.+|     +||+++
T Consensus        12 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h-----~~i~~~   86 (304)
T cd05101          12 FSRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH-----KNIINL   86 (304)
T ss_pred             ccHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccC-----CCchhe
Confidence            44578999999999999999999753       23457999998753  23346788999999999433     999999


Q ss_pred             EeEEEeCCEEEEEEecCCC-CHHHHHHhhccCC----------CCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          482 YDYFYHLEHLFIVCELLRA-NLYEFQKFNQESG----------GEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       482 ~d~F~~~~hLyIVmEll~G-sL~d~Lk~~~~~g----------~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ++++.....+|+||||+.+ +|.+++......+          ....++...+..++.||+.||.|||++||+|++||+
T Consensus        87 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp  165 (304)
T cd05101          87 LGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAA  165 (304)
T ss_pred             eEEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeeccccc
Confidence            9999999999999999976 9999998653211          012378889999999999999999999999999986

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.66  E-value=8.8e-16  Score=146.92  Aligned_cols=125  Identities=18%  Similarity=0.240  Sum_probs=106.7

Q ss_pred             EEeccCCceEEEEEEECCC---CcEEEEEEEecChh--hHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEEEEE
Q 008813          420 EYLGSAAFSKVFQAQDLHT---GVDVCLKIIKNDKD--FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIV  494 (552)
Q Consensus       420 e~LGkG~FG~VykA~Dkkt---g~~VAVKIIk~sk~--~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hLyIV  494 (552)
                      +.||+|+||.||+|.+...   +..||+|+++....  ..+.+.+|+++++.++|      +||+++++++.....++||
T Consensus         1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~------~~i~~~~~~~~~~~~~~lv   74 (262)
T cd00192           1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGH------PNVVRLLGVCTEEEPLYLV   74 (262)
T ss_pred             CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCC------CChheeeeeecCCCceEEE
Confidence            3689999999999999865   88999999987532  25778899999999997      9999999999999999999


Q ss_pred             EecCCC-CHHHHHHhhccC---CCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          495 CELLRA-NLYEFQKFNQES---GGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       495 mEll~G-sL~d~Lk~~~~~---g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      |||+.+ +|.++++.....   ....++++..++.++.||+.||.|||+++|+|++|++-
T Consensus        75 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~  134 (262)
T cd00192          75 LEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAAR  134 (262)
T ss_pred             EEeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcc
Confidence            999955 999999875210   00012899999999999999999999999999999863

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.66  E-value=1e-15  Score=152.83  Aligned_cols=132  Identities=17%  Similarity=0.157  Sum_probs=109.0

Q ss_pred             CceEEEEEeccCCceEEEEEEECCCCc--EEEEEEEecC--hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCC
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLHTGV--DVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE  489 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkktg~--~VAVKIIk~s--k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~  489 (552)
                      ++|++.+.||+|+||+||+|.+..++.  .+++|+++..  ....+.+.+|+.+++++.+|     |||+++++++...+
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~h-----p~iv~~~~~~~~~~   76 (297)
T cd05089           2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHH-----PNIINLLGACENRG   76 (297)
T ss_pred             ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCC-----CchhheEEEEccCC
Confidence            468999999999999999999877664  4788888742  23345688999999999544     99999999999999


Q ss_pred             EEEEEEecCCC-CHHHHHHhhccCC----------CCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          490 HLFIVCELLRA-NLYEFQKFNQESG----------GEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       490 hLyIVmEll~G-sL~d~Lk~~~~~g----------~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      .+|+||||+.+ +|.+++.......          ....+++..++.|+.||+.||+|||++||||+|||+-
T Consensus        77 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~  148 (297)
T cd05089          77 YLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAAR  148 (297)
T ss_pred             cceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcc
Confidence            99999999976 9999997643110          0123889999999999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.66  E-value=1.2e-15  Score=148.24  Aligned_cols=116  Identities=17%  Similarity=0.205  Sum_probs=105.0

Q ss_pred             eccCCceEEEEEEECCCCcEEEEEEEecCh----hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEEEEEEec
Q 008813          422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCEL  497 (552)
Q Consensus       422 LGkG~FG~VykA~Dkktg~~VAVKIIk~sk----~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hLyIVmEl  497 (552)
                      ||.|+||.||+|.+..+++.||+|++....    ...+.+.+|+++++.++|      +||+++++.+....++|+||||
T Consensus         1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h------~~i~~~~~~~~~~~~~~lv~e~   74 (262)
T cd05572           1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNH------PFIVKLYRTFKDKKYIYMLMEY   74 (262)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCC------CCEeeeeeeEEcCCccEEEEec
Confidence            799999999999999999999999997642    344678899999999998      9999999999999999999999


Q ss_pred             CCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          498 LRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       498 l~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      +.+ +|.+++.....      +++..++.++.||+.||.|||+++++|.+|++
T Consensus        75 ~~~~~L~~~l~~~~~------l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~  121 (262)
T cd05572          75 CLGGELWTILRDRGL------FDEYTARFYIACVVLAFEYLHNRGIIYRDLKP  121 (262)
T ss_pred             CCCCcHHHHHhhcCC------CCHHHHHHHHHHHHHHHHHHhhCCcccCCCCH
Confidence            876 99999987543      89999999999999999999999999999986

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.66  E-value=1.7e-16  Score=156.07  Aligned_cols=123  Identities=20%  Similarity=0.223  Sum_probs=109.2

Q ss_pred             CceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC--hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEE
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL  491 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s--k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hL  491 (552)
                      ..|++++.||+|+||.||+|.+..+++.||||++...  ....+.+.+|+.+++.++|      +||+++++++....++
T Consensus         4 ~~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h------~~i~~~~~~~~~~~~~   77 (277)
T cd06642           4 ELFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDS------PYITRYYGSYLKGTKL   77 (277)
T ss_pred             HHHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCC------CccHhhhcccccCCce
Confidence            3577778899999999999999989999999998753  2344678899999999998      9999999999999999


Q ss_pred             EEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          492 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       492 yIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      |+||||+.+ +|.+++....       +++..++.++.||+.||.|||+++|+|.+|++
T Consensus        78 ~lv~e~~~~~~L~~~~~~~~-------~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p  129 (277)
T cd06642          78 WIIMEYLGGGSALDLLKPGP-------LEETYIATILREILKGLDYLHSERKIHRDIKA  129 (277)
T ss_pred             EEEEEccCCCcHHHHhhcCC-------CCHHHHHHHHHHHHHHHHHHhcCCeeccCCCh
Confidence            999999987 8998886422       89999999999999999999999999999986

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.65  E-value=1.6e-15  Score=152.93  Aligned_cols=134  Identities=21%  Similarity=0.294  Sum_probs=110.1

Q ss_pred             eecCceEEEEEeccCCceEEEEEEECC-------CCcEEEEEEEecC--hhhHHHHHHHHHHHHHhcccCCCCCCCeeEe
Q 008813          411 VIAGRYYVTEYLGSAAFSKVFQAQDLH-------TGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRL  481 (552)
Q Consensus       411 vi~~RY~Ile~LGkG~FG~VykA~Dkk-------tg~~VAVKIIk~s--k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL  481 (552)
                      ...+||.+.+.||+|+||.||+|++..       ....+|+|+++..  ......+.+|+++++.+..|     +||+++
T Consensus         9 ~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h-----~~iv~~   83 (314)
T cd05099           9 FPRDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKH-----KNIINL   83 (314)
T ss_pred             ccHHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCC-----CCeeeE
Confidence            345789999999999999999998642       3457999998754  23345678999999999533     999999


Q ss_pred             EeEEEeCCEEEEEEecCCC-CHHHHHHhhccC----------CCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          482 YDYFYHLEHLFIVCELLRA-NLYEFQKFNQES----------GGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       482 ~d~F~~~~hLyIVmEll~G-sL~d~Lk~~~~~----------g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ++++...+.+|+||||+.+ +|.+++......          .....+++..+..++.||+.||.|||++||+|++|++
T Consensus        84 ~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp  162 (314)
T cd05099          84 LGVCTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAA  162 (314)
T ss_pred             EEEEccCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeeccccc
Confidence            9999999999999999986 999999764310          0112388999999999999999999999999999986

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.65  E-value=4.7e-16  Score=156.98  Aligned_cols=124  Identities=30%  Similarity=0.271  Sum_probs=111.3

Q ss_pred             ceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC---hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCC--
Q 008813          415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE--  489 (552)
Q Consensus       415 RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s---k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~--  489 (552)
                      ||++.+.||.|+||.||+|++..+++.||||++...   ....+.+.+|+.+++.++|      +||+++++++....  
T Consensus         1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~------~~i~~~~~~~~~~~~~   74 (330)
T cd07834           1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRH------ENIIGLLDILRPPSPE   74 (330)
T ss_pred             CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCC------cchhhhhhhhcccCcc
Confidence            699999999999999999999999999999998763   2344678899999999998      99999999998775  


Q ss_pred             ---EEEEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          490 ---HLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       490 ---hLyIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                         ++|+||||+.++|.++++...      ++++..++.++.||+.||.|||++||+|.+|++-
T Consensus        75 ~~~~~~lv~e~~~~~l~~~l~~~~------~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~  132 (330)
T cd07834          75 DFNDVYIVTELMETDLHKVIKSPQ------PLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPS  132 (330)
T ss_pred             cccceEEEecchhhhHHHHHhCCC------CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHH
Confidence               899999999999999987654      2899999999999999999999999999999863

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.65  E-value=8.7e-17  Score=165.58  Aligned_cols=123  Identities=19%  Similarity=0.264  Sum_probs=111.8

Q ss_pred             eEE-EEEeccCCceEEEEEEECCCCcEEEEEEEecChh-hHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEEEE
Q 008813          416 YYV-TEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD-FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFI  493 (552)
Q Consensus       416 Y~I-le~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~-~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hLyI  493 (552)
                      |++ .+.||+|+|+.|-.|....++..||||||.+... .+.++.||++++...+.|     +||++|+++|++...+||
T Consensus        79 YkLt~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh-----~nilqLiefFEdd~~FYL  153 (463)
T KOG0607|consen   79 YKLTSELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGH-----KNILQLIEFFEDDTRFYL  153 (463)
T ss_pred             HHhHHHHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCC-----ccHHHHHHHhcccceEEE
Confidence            544 3579999999999999999999999999987643 457899999999999876     999999999999999999


Q ss_pred             EEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          494 VCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       494 VmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      |||-|.| .|.+.|.+++.      |++.++..+++.|+.||.|||.+||.|+|||+
T Consensus       154 VfEKm~GGplLshI~~~~~------F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKP  204 (463)
T KOG0607|consen  154 VFEKMRGGPLLSHIQKRKH------FNEREASRVVKDIASALDFLHTKGIAHRDLKP  204 (463)
T ss_pred             EEecccCchHHHHHHHhhh------ccHHHHHHHHHHHHHHHHHHhhcCcccccCCc
Confidence            9999987 88888887664      99999999999999999999999999999996

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.65  E-value=1.3e-15  Score=149.02  Aligned_cols=126  Identities=20%  Similarity=0.237  Sum_probs=107.8

Q ss_pred             cCceEEEEEeccCCceEEEEEEECCC---CcEEEEEEEecC--hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEe
Q 008813          413 AGRYYVTEYLGSAAFSKVFQAQDLHT---GVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH  487 (552)
Q Consensus       413 ~~RY~Ile~LGkG~FG~VykA~Dkkt---g~~VAVKIIk~s--k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~  487 (552)
                      ..+|.+.+.||+|+||.||+|.+...   ...||||.....  ....+.+.+|+.+++.+.|      +||+++++++..
T Consensus         5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h------~~i~~~~~~~~~   78 (270)
T cd05056           5 REDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDH------PHIVKLIGVITE   78 (270)
T ss_pred             hhhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCC------CchhceeEEEcC
Confidence            45799999999999999999987644   456899988764  3345678899999999998      999999998875


Q ss_pred             CCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          488 LEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       488 ~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                       +..|+|||++.+ +|.++++....     .+++..++.++.||+.||.|||+++++|.+|++-
T Consensus        79 -~~~~lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~  136 (270)
T cd05056          79 -NPVWIVMELAPLGELRSYLQVNKY-----SLDLASLILYSYQLSTALAYLESKRFVHRDIAAR  136 (270)
T ss_pred             -CCcEEEEEcCCCCcHHHHHHhCCC-----CCCHHHHHHHHHHHHHHHHHHHhCCeeccccChh
Confidence             567899999976 99999986543     2899999999999999999999999999999974

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>PHA03210 serine/threonine kinase US3; Provisional

Probab=99.65  E-value=3.6e-16  Score=170.43  Aligned_cols=134  Identities=16%  Similarity=0.108  Sum_probs=104.3

Q ss_pred             CceecCceEEEEEeccCCceEEEEEEECCCC-cEEEEE------------------EEecChhhHHHHHHHHHHHHHhcc
Q 008813          409 NTVIAGRYYVTEYLGSAAFSKVFQAQDLHTG-VDVCLK------------------IIKNDKDFFDQSLDEIKLLKLVNK  469 (552)
Q Consensus       409 gdvi~~RY~Ile~LGkG~FG~VykA~Dkktg-~~VAVK------------------IIk~sk~~~~~~lrEIkILk~L~h  469 (552)
                      ++.+.++|++++.||+|+||+||+|..+... ..+++|                  .+.........+.+|+.+|+.|+|
T Consensus       143 ~~~~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~H  222 (501)
T PHA03210        143 DDEFLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNH  222 (501)
T ss_pred             chhhhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCC
Confidence            4456678999999999999999999765322 222222                  222222334567899999999998


Q ss_pred             cCCCCCCCeeEeEeEEEeCCEEEEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          470 NDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       470 hd~~d~pnIVrL~d~F~~~~hLyIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                            +|||++++++...+..|+|||++.++|.+++........ .......++.|+.||+.||.|||++||||+|||+
T Consensus       223 ------pnIv~l~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~-~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLKP  295 (501)
T PHA03210        223 ------ENILKIEEILRSEANTYMITQKYDFDLYSFMYDEAFDWK-DRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKL  295 (501)
T ss_pred             ------CCcCcEeEEEEECCeeEEEEeccccCHHHHHhhcccccc-ccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCH
Confidence                  999999999999999999999999999998765432111 1144677889999999999999999999999996

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.65  E-value=7.3e-16  Score=148.08  Aligned_cols=116  Identities=22%  Similarity=0.252  Sum_probs=104.9

Q ss_pred             eccCCceEEEEEEECCCCcEEEEEEEecCh----hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEEEEEEec
Q 008813          422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCEL  497 (552)
Q Consensus       422 LGkG~FG~VykA~Dkktg~~VAVKIIk~sk----~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hLyIVmEl  497 (552)
                      ||.|+||.||++.+..+++.++||++....    .....+.+|+.++++++|      +||+++++.+.....+|+|||+
T Consensus         1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h------~~i~~~~~~~~~~~~~~lv~e~   74 (265)
T cd05579           1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQS------PYVVKLYYSFQGKKNLYLVMEY   74 (265)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCC------cchhHHHHheecCcEEEEEEec
Confidence            689999999999999999999999997642    345678899999999998      9999999999999999999999


Q ss_pred             CCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          498 LRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       498 l~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      +.+ +|.++++....      +++..++.++.||+.||.|||+++|+|.+|++
T Consensus        75 ~~~~~L~~~l~~~~~------~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~  121 (265)
T cd05579          75 LPGGDLASLLENVGS------LDEDVARIYIAEIVLALEYLHSNGIIHRDLKP  121 (265)
T ss_pred             CCCCcHHHHHHHcCC------CCHHHHHHHHHHHHHHHHHHHHcCeecCCCCH
Confidence            976 99999987542      89999999999999999999999999999986

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.65  E-value=7.3e-18  Score=168.62  Aligned_cols=127  Identities=22%  Similarity=0.257  Sum_probs=112.3

Q ss_pred             eecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC---hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEe
Q 008813          411 VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH  487 (552)
Q Consensus       411 vi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s---k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~  487 (552)
                      .+.+.|++.+.||+|.|+.|++|.+..+|+.+|+|+|..+   ....+.+.+|++|-+.|+|      |||++|.+....
T Consensus         8 ~f~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqH------P~IvrL~~ti~~   81 (355)
T KOG0033|consen    8 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH------PNIVRLHDSIQE   81 (355)
T ss_pred             ccchhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCC------CcEeehhhhhcc
Confidence            3456799999999999999999999999999999999754   2245678999999999999      999999999999


Q ss_pred             CCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          488 LEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       488 ~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ....|||+|+|.| +|..-|-.+-.      ++|..+..+++||++||.|+|.+||||+|||+
T Consensus        82 ~~~~ylvFe~m~G~dl~~eIV~R~~------ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP  138 (355)
T KOG0033|consen   82 ESFHYLVFDLVTGGELFEDIVAREF------YSEADASHCIQQILEALAYCHSNGIVHRDLKP  138 (355)
T ss_pred             cceeEEEEecccchHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHhcCceeccCCh
Confidence            9999999999998 77655544332      89999999999999999999999999999996

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.65  E-value=1.2e-15  Score=151.29  Aligned_cols=130  Identities=22%  Similarity=0.284  Sum_probs=108.2

Q ss_pred             ceEEEEEeccCCceEEEEEEECC-----CCcEEEEEEEecCh--hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEe
Q 008813          415 RYYVTEYLGSAAFSKVFQAQDLH-----TGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH  487 (552)
Q Consensus       415 RY~Ile~LGkG~FG~VykA~Dkk-----tg~~VAVKIIk~sk--~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~  487 (552)
                      +|++.+.||+|+||.||+|.+..     ....+|+|++....  .....+.+|+.+++.++|      |||+++++.+..
T Consensus         1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h------~~iv~~~~~~~~   74 (290)
T cd05045           1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNH------PHVIKLYGACSQ   74 (290)
T ss_pred             CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCC------CCEeeEEEEEec
Confidence            47888999999999999998753     23578999887542  234678899999999998      999999999999


Q ss_pred             CCEEEEEEecCCC-CHHHHHHhhccC------------------CCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecc
Q 008813          488 LEHLFIVCELLRA-NLYEFQKFNQES------------------GGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILF  548 (552)
Q Consensus       488 ~~hLyIVmEll~G-sL~d~Lk~~~~~------------------g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~  548 (552)
                      .+..++||||+.+ +|.+++......                  ....++++..+..++.||+.||.|||+++|||++|+
T Consensus        75 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dik  154 (290)
T cd05045          75 DGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLA  154 (290)
T ss_pred             CCCcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeehhhhh
Confidence            9999999999986 999998753210                  012348899999999999999999999999999998


Q ss_pred             cc
Q 008813          549 CF  550 (552)
Q Consensus       549 ~~  550 (552)
                      +-
T Consensus       155 p~  156 (290)
T cd05045         155 AR  156 (290)
T ss_pred             hh
Confidence            64

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.65  E-value=1.7e-15  Score=154.24  Aligned_cols=125  Identities=28%  Similarity=0.281  Sum_probs=107.4

Q ss_pred             ceEEEEEeccCCceEEEEEEECCC--CcEEEEEEEecC---hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeC-
Q 008813          415 RYYVTEYLGSAAFSKVFQAQDLHT--GVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL-  488 (552)
Q Consensus       415 RY~Ile~LGkG~FG~VykA~Dkkt--g~~VAVKIIk~s---k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~-  488 (552)
                      +|.+.+.||+|+||.||++++..+  +..||||++...   ....+.+.+|+.+++++.+|     +||+++++.+... 
T Consensus         1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h-----~~iv~~~~~~~~~~   75 (332)
T cd07857           1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGH-----KNITCLYDMDIVFP   75 (332)
T ss_pred             CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCC-----CChheeeeeeeecc
Confidence            589999999999999999999887  889999998753   22345678899999999644     9999999976432 


Q ss_pred             ---CEEEEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          489 ---EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       489 ---~hLyIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                         ..+|++||+++++|.+++.....      +++..++.++.||+.||.|||++||||++||+-
T Consensus        76 ~~~~~~~~~~e~~~~~L~~~l~~~~~------~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~  134 (332)
T cd07857          76 GNFNELYLYEELMEADLHQIIRSGQP------LTDAHFQSFIYQILCGLKYIHSANVLHRDLKPG  134 (332)
T ss_pred             ccCCcEEEEEecccCCHHHHHhcCCC------CCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHH
Confidence               56899999999999999875432      899999999999999999999999999999963

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.65  E-value=2.2e-16  Score=169.91  Aligned_cols=128  Identities=25%  Similarity=0.347  Sum_probs=117.4

Q ss_pred             eecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChh---hHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEe
Q 008813          411 VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD---FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH  487 (552)
Q Consensus       411 vi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~---~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~  487 (552)
                      .|++-|.+.+.||+|-|.+|.+|++.-||..||||+|.+.+.   ...++..|++.|+.++|      ||||+||.+.-+
T Consensus        15 kIAGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQH------pNiVRLYEViDT   88 (864)
T KOG4717|consen   15 KIAGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQH------PNIVRLYEVIDT   88 (864)
T ss_pred             ceeeeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcC------cCeeeeeehhcc
Confidence            477889999999999999999999999999999999987532   34678899999999999      999999999999


Q ss_pred             CCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          488 LEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       488 ~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      +..+|||+|+-++ +|+++|..+.. |    +.+..++.|++||+.|+.|+|+..+||+|||+
T Consensus        89 QTKlyLiLELGD~GDl~DyImKHe~-G----l~E~La~kYF~QI~~AI~YCHqLHVVHRDLKP  146 (864)
T KOG4717|consen   89 QTKLYLILELGDGGDLFDYIMKHEE-G----LNEDLAKKYFAQIVHAISYCHQLHVVHRDLKP  146 (864)
T ss_pred             cceEEEEEEecCCchHHHHHHhhhc-c----ccHHHHHHHHHHHHHHHHHHhhhhhhcccCCc
Confidence            9999999999877 99999987653 3    99999999999999999999999999999997

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.65  E-value=1.3e-15  Score=146.28  Aligned_cols=128  Identities=18%  Similarity=0.172  Sum_probs=111.7

Q ss_pred             ceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC---hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEE
Q 008813          415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL  491 (552)
Q Consensus       415 RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s---k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hL  491 (552)
                      +|++.+.||.|+||.||++.+..+++.+|||.+...   ......+.+|+++++.++|      +||+++++++......
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~------~~i~~~~~~~~~~~~~   74 (256)
T cd08530           1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNH------PNIISYKEAFLDGNKL   74 (256)
T ss_pred             CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCC------CCchhhhhhhccCCEE
Confidence            589999999999999999999999999999998753   2334567789999999998      9999999999999999


Q ss_pred             EEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          492 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       492 yIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      |+||||+.+ +|.+++......+  ..+++..+..++.||+.||.|||++||+|++|++-
T Consensus        75 ~~v~e~~~~~~L~~~~~~~~~~~--~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~  132 (256)
T cd08530          75 CIVMEYAPFGDLSKAISKRKKKR--KLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSA  132 (256)
T ss_pred             EEEehhcCCCCHHHHHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcc
Confidence            999999977 9999987643211  23899999999999999999999999999999863

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.65  E-value=1.3e-15  Score=148.96  Aligned_cols=123  Identities=16%  Similarity=0.106  Sum_probs=100.8

Q ss_pred             EeccCCceEEEEEEECC--CCcEEEEEEEecC--hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEEEEEEe
Q 008813          421 YLGSAAFSKVFQAQDLH--TGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCE  496 (552)
Q Consensus       421 ~LGkG~FG~VykA~Dkk--tg~~VAVKIIk~s--k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hLyIVmE  496 (552)
                      .||+|+||.||+|....  ....+|+|.+...  ......+.+|+.+++.++|      +||+++++.+.....+|||||
T Consensus         2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h------~nii~~~~~~~~~~~~~lv~e   75 (269)
T cd05042           2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNH------PNVLQCLGQCIESIPYLLVLE   75 (269)
T ss_pred             cCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCC------CCcceEEEEECCCCceEEEEE
Confidence            68999999999996533  3457888887643  2233567889999999988      999999999999999999999


Q ss_pred             cCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          497 LLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       497 ll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      |+.+ +|.++++...... ...+++..++.++.||+.||.|||+++|||+|||+-
T Consensus        76 ~~~~g~L~~~l~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~  129 (269)
T cd05042          76 FCPLGDLKNYLRSNRGMV-AQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALR  129 (269)
T ss_pred             eCCCCcHHHHHHhccccc-cccccHHHHHHHHHHHHHHHHHHHhcCEecccccHh
Confidence            9986 9999998754211 112567888999999999999999999999999974

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.65  E-value=1.9e-15  Score=149.26  Aligned_cols=128  Identities=21%  Similarity=0.219  Sum_probs=114.9

Q ss_pred             ecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEE
Q 008813          412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL  491 (552)
Q Consensus       412 i~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hL  491 (552)
                      ....|++...||+|+||.||++.+..++..|++|++.........+.+|+.+++.++|      +||+++++.+.....+
T Consensus        17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~------~~i~~~~~~~~~~~~~   90 (286)
T cd06614          17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQNKELIINEILIMKDCKH------PNIVDYYDSYLVGDEL   90 (286)
T ss_pred             ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCchhHHHHHHHHHHHHHCCC------CCeeEEEEEEEECCEE
Confidence            4456888999999999999999999889999999998754445678899999999998      9999999999999999


Q ss_pred             EEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          492 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       492 yIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      |+||||+.+ +|.+++.....     .+++..+..++.||+.||.|||++||+|.+|++-
T Consensus        91 ~lv~e~~~~~~L~~~l~~~~~-----~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~  145 (286)
T cd06614          91 WVVMEYMDGGSLTDIITQNFV-----RMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSD  145 (286)
T ss_pred             EEEEeccCCCcHHHHHHHhcc-----CCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChh
Confidence            999999996 99999987651     2899999999999999999999999999999863

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.65  E-value=5.4e-16  Score=150.55  Aligned_cols=128  Identities=18%  Similarity=0.184  Sum_probs=108.4

Q ss_pred             ceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC------hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeC
Q 008813          415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND------KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL  488 (552)
Q Consensus       415 RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s------k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~  488 (552)
                      ||.+.++||+|+||.||++.+..++..+++|+++..      .....++.+|+.+++.++|      |||+++++++...
T Consensus         1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h------~~i~~~~~~~~~~   74 (260)
T cd08222           1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDH------PAIVKFHASFLER   74 (260)
T ss_pred             CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCC------CcHHHHHHHHhcC
Confidence            799999999999999999999888777888877641      2223456789999999998      9999999999999


Q ss_pred             CEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          489 EHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       489 ~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      ...++||||+.+ +|..++......+  ..+++..++.++.|++.||.|||++||+|.+|++-
T Consensus        75 ~~~~lv~e~~~~~~l~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~  135 (260)
T cd08222          75 DAFCIITEYCEGRDLDCKLEELKHTG--KTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAK  135 (260)
T ss_pred             CceEEEEEeCCCCCHHHHHHHHhhcc--cccCHHHHHHHHHHHHHHHHHHHHcCccccCCChh
Confidence            999999999987 8998887533221  13899999999999999999999999999999863

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.65  E-value=2e-15  Score=152.69  Aligned_cols=125  Identities=13%  Similarity=0.171  Sum_probs=110.5

Q ss_pred             CceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC----hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCC
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND----KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE  489 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s----k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~  489 (552)
                      ..|...+.||+|+||.||++.+..++..||||++...    ......+.+|+++++.++|      +||+++++++....
T Consensus        25 ~~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h------~~iv~~~~~~~~~~   98 (317)
T cd06635          25 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKH------PNSIEYKGCYLREH   98 (317)
T ss_pred             hhhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCC------CCEEEEEEEEeeCC
Confidence            4477889999999999999999999999999998743    2234568899999999998      99999999999999


Q ss_pred             EEEEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          490 HLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       490 hLyIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ..+|||||+.++|.+++.....     ++++..+..++.||+.||.|||+++|+|.+|++
T Consensus        99 ~~~lv~e~~~g~l~~~~~~~~~-----~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p  153 (317)
T cd06635          99 TAWLVMEYCLGSASDLLEVHKK-----PLQEVEIAAITHGALQGLAYLHSHNMIHRDIKA  153 (317)
T ss_pred             eEEEEEeCCCCCHHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCc
Confidence            9999999999998888775442     289999999999999999999999999999986

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=99.65  E-value=2e-15  Score=146.50  Aligned_cols=119  Identities=15%  Similarity=0.114  Sum_probs=99.7

Q ss_pred             EEeccCCceEEEEEEECCCCcEEEEEEEecChh----hHHHHHHHHHHHHHh-cccCCCCCCCeeEeEeEEEeCCEEEEE
Q 008813          420 EYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD----FFDQSLDEIKLLKLV-NKNDPADEHHILRLYDYFYHLEHLFIV  494 (552)
Q Consensus       420 e~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~----~~~~~lrEIkILk~L-~hhd~~d~pnIVrL~d~F~~~~hLyIV  494 (552)
                      +.||.|+||.||+|.+..+++.||||++++...    .......|..++... +|      +||+++++++...+++|+|
T Consensus         2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~------~~i~~~~~~~~~~~~~~lv   75 (260)
T cd05611           2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGES------PYVAKLYYSFQSKDYLYLV   75 (260)
T ss_pred             ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCC------CCeeeeeeeEEcCCeEEEE
Confidence            578999999999999999999999999975421    122344555554443 44      9999999999999999999


Q ss_pred             EecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          495 CELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       495 mEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      |||+.+ +|.++++....      +++..+..++.||+.||.|||+++|+|.+|++-
T Consensus        76 ~e~~~~~~L~~~l~~~~~------~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~  126 (260)
T cd05611          76 MEYLNGGDCASLIKTLGG------LPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPE  126 (260)
T ss_pred             EeccCCCCHHHHHHHcCC------CCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHH
Confidence            999987 99999986542      899999999999999999999999999999863

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.64  E-value=2.2e-15  Score=149.59  Aligned_cols=130  Identities=19%  Similarity=0.243  Sum_probs=109.4

Q ss_pred             CceEEEEEeccCCceEEEEEEEC-----CCCcEEEEEEEecC-hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEe
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDL-----HTGVDVCLKIIKND-KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH  487 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dk-----ktg~~VAVKIIk~s-k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~  487 (552)
                      ..|.+.+.||+|+||+||++.+.     .++..+|+|.+... ......+.+|+.++++++|      +||+++++++..
T Consensus         5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h------~~i~~~~~~~~~   78 (288)
T cd05093           5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQH------EHIVKFYGVCVE   78 (288)
T ss_pred             HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCC------CCcceEEEEEec
Confidence            46899999999999999999853     34567999998754 3345678899999999998      999999999999


Q ss_pred             CCEEEEEEecCCC-CHHHHHHhhccC-------CCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          488 LEHLFIVCELLRA-NLYEFQKFNQES-------GGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       488 ~~hLyIVmEll~G-sL~d~Lk~~~~~-------g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      .+.+++||||+.+ +|.++++.....       .....+++..++.++.||+.||.|||++||+|++|++
T Consensus        79 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp  148 (288)
T cd05093          79 GDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLAT  148 (288)
T ss_pred             CCccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCc
Confidence            9999999999986 999999754310       0012389999999999999999999999999999997

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.64  E-value=2e-15  Score=147.72  Aligned_cols=118  Identities=19%  Similarity=0.201  Sum_probs=100.4

Q ss_pred             EeccCCceEEEEEEEC--CCCcEEEEEEEecC--hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEEEEEEe
Q 008813          421 YLGSAAFSKVFQAQDL--HTGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCE  496 (552)
Q Consensus       421 ~LGkG~FG~VykA~Dk--ktg~~VAVKIIk~s--k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hLyIVmE  496 (552)
                      .||+|+||.||+|.+.  ..+..||+|++...  +...+.+.+|+.++++++|      +||+++++++. ...+++|||
T Consensus         2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h------~~ii~~~~~~~-~~~~~lv~e   74 (257)
T cd05115           2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDN------PYIVRMIGVCE-AEALMLVME   74 (257)
T ss_pred             ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCC------CCeEEEEEEEc-CCCeEEEEE
Confidence            4899999999999765  44567999999764  2334668899999999998      99999999875 457899999


Q ss_pred             cCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          497 LLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       497 ll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      |+.+ +|.+++..+..     .+++..++.++.||+.||.|||++||+|+||++-
T Consensus        75 ~~~~~~L~~~l~~~~~-----~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~  124 (257)
T cd05115          75 MASGGPLNKFLSGKKD-----EITVSNVVELMHQVSMGMKYLEGKNFVHRDLAAR  124 (257)
T ss_pred             eCCCCCHHHHHHhCCC-----CCCHHHHHHHHHHHHHHHHHHHhcCeeecccchh
Confidence            9976 99999875432     2899999999999999999999999999999963

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.64  E-value=3.2e-15  Score=146.22  Aligned_cols=128  Identities=23%  Similarity=0.250  Sum_probs=107.8

Q ss_pred             eEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC---hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCE--
Q 008813          416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH--  490 (552)
Q Consensus       416 Y~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s---k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~h--  490 (552)
                      |++.+.||+|+||.||+|.+..+++.||||+++..   ......+.+|+.+++++..   .+++||+++++++...+.  
T Consensus         1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~---~~h~~i~~~~~~~~~~~~~~   77 (287)
T cd07838           1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLES---FEHPNIVRLLDVCHGPRTDR   77 (287)
T ss_pred             CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhc---cCCCCcceEEEEEeeccCCC
Confidence            67889999999999999999988999999999753   1223456678888888752   112999999999998776  


Q ss_pred             ---EEEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          491 ---LFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       491 ---LyIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                         ++++||++.++|.+++.......    +++..++.++.||+.||.|||+++|+|.+|+.-
T Consensus        78 ~~~~~l~~e~~~~~l~~~l~~~~~~~----l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~  136 (287)
T cd07838          78 ELKLTLVFEHVDQDLATYLSKCPKPG----LPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQ  136 (287)
T ss_pred             CceeEEEehhcccCHHHHHHHccCCC----CCHHHHHHHHHHHHHHHHHHHHCCeeeccCChh
Confidence               99999999999999887654322    899999999999999999999999999999863

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=99.64  E-value=2.9e-15  Score=148.90  Aligned_cols=120  Identities=19%  Similarity=0.239  Sum_probs=98.7

Q ss_pred             EeccCCceEEEEEEECCCCcEEEEEEEecCh----hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEEEEEEe
Q 008813          421 YLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCE  496 (552)
Q Consensus       421 ~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk----~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hLyIVmE  496 (552)
                      .||+|+||.||++.+..+++.+|||++....    .......+|..+++.+.+   .++++|+.+++++...+.+++|||
T Consensus         1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~i~~~~~~~~~~~~~~lv~e   77 (279)
T cd05633           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST---GDCPFIVCMTYAFHTPDKLCFILD   77 (279)
T ss_pred             CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhh---CCCCcEeEEEEEEecCCeEEEEEe
Confidence            4899999999999999999999999987542    112234455555555432   122999999999999999999999


Q ss_pred             cCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          497 LLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       497 ll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      |+.+ +|.+++..+..      +++..+..|+.||+.||.|||+++|||+|||+
T Consensus        78 ~~~~~~L~~~i~~~~~------l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp  125 (279)
T cd05633          78 LMNGGDLHYHLSQHGV------FSEKEMRFYATEIILGLEHMHNRFVVYRDLKP  125 (279)
T ss_pred             cCCCCCHHHHHHhcCC------CCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCH
Confidence            9987 89998876543      89999999999999999999999999999986

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.64  E-value=2.7e-15  Score=145.67  Aligned_cols=124  Identities=18%  Similarity=0.170  Sum_probs=107.0

Q ss_pred             CceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEE-eCCEEE
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFY-HLEHLF  492 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~-~~~hLy  492 (552)
                      .+|++.+.||+|+||.||++...  +..||+|.++... ..+.+.+|+.+++.++|      +||+++++++. ..+.++
T Consensus         6 ~~~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~-~~~~~~~e~~~l~~l~~------~~i~~~~~~~~~~~~~~~   76 (256)
T cd05082           6 KELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDA-TAQAFLAEASVMTQLRH------SNLVQLLGVIVEEKGGLY   76 (256)
T ss_pred             HhCeeeeeecccCCCeEEEEEEc--CCcEEEEEeCCCc-hHHHHHHHHHHHHhCCC------CCeeeEEEEEEcCCCceE
Confidence            57999999999999999999764  7789999997643 34568899999999998      99999999765 456799


Q ss_pred             EEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          493 IVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       493 IVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      +||||+.+ +|.++++.....    .+++..+..++.||+.||.|||++||+|++|++-
T Consensus        77 lv~e~~~~~~L~~~~~~~~~~----~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~  131 (256)
T cd05082          77 IVTEYMAKGSLVDYLRSRGRS----VLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAAR  131 (256)
T ss_pred             EEEECCCCCcHHHHHHhcCCC----CCCHHHHHHHHHHHHHHHHHHHhCCEeccccchh
Confidence            99999986 999999865432    2789999999999999999999999999999974

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.64  E-value=9.2e-16  Score=150.43  Aligned_cols=125  Identities=26%  Similarity=0.272  Sum_probs=108.6

Q ss_pred             eEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChh--hHHHHHHHHHHHHHhc-ccCCCCCCCeeEeEeEEEeCCEEE
Q 008813          416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD--FFDQSLDEIKLLKLVN-KNDPADEHHILRLYDYFYHLEHLF  492 (552)
Q Consensus       416 Y~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~--~~~~~lrEIkILk~L~-hhd~~d~pnIVrL~d~F~~~~hLy  492 (552)
                      |++.+.||+|+||.||+|.+..+++.||||.+.....  ......+|+..+++++ |      +||+++++++...++++
T Consensus         1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h------~~i~~~~~~~~~~~~~~   74 (283)
T cd07830           1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEH------PNIVKLKEVFRENDELY   74 (283)
T ss_pred             CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCC------CCchhHHHHhhcCCcEE
Confidence            6788999999999999999998999999999875422  1223457999999998 6      99999999999999999


Q ss_pred             EEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          493 IVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       493 IVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      +|||+++++|.+++.......    +++..+..++.||+.+|.|||++||+|.+|++-
T Consensus        75 lv~e~~~~~l~~~~~~~~~~~----~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~  128 (283)
T cd07830          75 FVFEYMEGNLYQLMKDRKGKP----FSESVIRSIIYQILQGLAHIHKHGFFHRDLKPE  128 (283)
T ss_pred             EEEecCCCCHHHHHHhccccc----CCHHHHHHHHHHHHHHHHHHHHCCcccCCCChh
Confidence            999999889999988764222    899999999999999999999999999999863

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.64  E-value=8.1e-16  Score=156.57  Aligned_cols=126  Identities=23%  Similarity=0.219  Sum_probs=109.5

Q ss_pred             eecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC---hhhHHHHHHHHHHHHHh-cccCCCCCCCeeEeEeEEE
Q 008813          411 VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLV-NKNDPADEHHILRLYDYFY  486 (552)
Q Consensus       411 vi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s---k~~~~~~lrEIkILk~L-~hhd~~d~pnIVrL~d~F~  486 (552)
                      .+.++|++.+.||+|+||.||+|.+..+++.+|||.+...   ......+.+|+.+++.+ +|      +||+++++++.
T Consensus         4 ~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h------~ni~~~~~~~~   77 (337)
T cd07852           4 HILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDH------PNIVKLLNVIK   77 (337)
T ss_pred             hhhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCC------CCccceeeeec
Confidence            4567899999999999999999999989999999988542   22335577899999999 76      99999999987


Q ss_pred             eC--CEEEEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          487 HL--EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       487 ~~--~hLyIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ..  ..+|+||||+.++|..+++...       +++..++.++.||+.||.|||++||+|++|++
T Consensus        78 ~~~~~~~~lv~e~~~~~L~~~~~~~~-------~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p  135 (337)
T cd07852          78 AENDKDIYLVFEYMETDLHAVIRANI-------LEDVHKRYIMYQLLKALKYIHSGNVIHRDLKP  135 (337)
T ss_pred             cCCCceEEEEecccccCHHHHHhcCC-------CCHHHHHHHHHHHHHHHHHHHHCCeecCCCCH
Confidence            54  4789999999999999887641       78899999999999999999999999999986

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.64  E-value=1.7e-15  Score=146.81  Aligned_cols=123  Identities=23%  Similarity=0.264  Sum_probs=106.4

Q ss_pred             CceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEEEE
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFI  493 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hLyI  493 (552)
                      ++|++.+.||+|+||.||++..  +++.||+|+++... ....+.+|+.+++.++|      +||+++++++... .+++
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~~--~~~~~~iK~~~~~~-~~~~~~~e~~~l~~~~~------~~i~~~~~~~~~~-~~~~   75 (254)
T cd05083           6 QKLTLGEIIGEGEFGAVLQGEY--TGQKVAVKNIKCDV-TAQAFLEETAVMTKLHH------KNLVRLLGVILHN-GLYI   75 (254)
T ss_pred             HHceeeeeeccCCCCceEeccc--CCCceEEEeecCcc-hHHHHHHHHHHHHhCCC------CCcCeEEEEEcCC-CcEE
Confidence            5799999999999999999864  67889999997543 34678899999999998      9999999998754 4799


Q ss_pred             EEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          494 VCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       494 VmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      ||||+.+ +|.++++.....    .+++..+..++.||+.||.|||++|++|++|++-
T Consensus        76 v~e~~~~~~L~~~l~~~~~~----~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~  129 (254)
T cd05083          76 VMELMSKGNLVNFLRTRGRA----LVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAAR  129 (254)
T ss_pred             EEECCCCCCHHHHHHhcCcC----CCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcc
Confidence            9999986 999999865432    2899999999999999999999999999999974

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.64  E-value=4.5e-15  Score=140.59  Aligned_cols=123  Identities=23%  Similarity=0.361  Sum_probs=111.6

Q ss_pred             eEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChh-hHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEEEEE
Q 008813          416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD-FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIV  494 (552)
Q Consensus       416 Y~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~-~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hLyIV  494 (552)
                      |.+.+.||+|++|.||++.+..+++.+++|+++.... ....+.+|+.+++.++|      ++|+++++.+......+++
T Consensus         2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~------~~i~~~~~~~~~~~~~~l~   75 (253)
T cd05122           2 FEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKH------PNIVKYYGSYLKKDELWIV   75 (253)
T ss_pred             ceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCC------CCEeEEEEEEecCCeEEEE
Confidence            7888999999999999999998999999999987543 45778899999999998      9999999999999999999


Q ss_pred             EecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          495 CELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       495 mEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      |||+.+ +|.+++.....     ++++..+..++.|++.||.|||.+|++|.+|++
T Consensus        76 ~e~~~~~~L~~~~~~~~~-----~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p  126 (253)
T cd05122          76 MEFCSGGSLKDLLKSTNQ-----TLTESQIAYVCKELLKGLEYLHSNGIIHRDIKA  126 (253)
T ss_pred             EecCCCCcHHHHHhhcCC-----CCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCH
Confidence            999996 99999887532     289999999999999999999999999999986

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.64  E-value=6.1e-17  Score=166.96  Aligned_cols=127  Identities=21%  Similarity=0.266  Sum_probs=115.6

Q ss_pred             eecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC----hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEE
Q 008813          411 VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND----KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFY  486 (552)
Q Consensus       411 vi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s----k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~  486 (552)
                      +-.+.|..+++||+|.||+|.+|+.+.+++.|||||+++.    +..+.+.+.|-++|+..+|      |.+..|...|+
T Consensus       165 vTm~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~H------PFLt~LKYsFQ  238 (516)
T KOG0690|consen  165 VTMEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRH------PFLTSLKYSFQ  238 (516)
T ss_pred             eccchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccC------cHHHHhhhhhc
Confidence            4556788899999999999999999999999999999875    4556778899999999999      99999999999


Q ss_pred             eCCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          487 HLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       487 ~~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      .++++|+||||..| .|+-.|.+.+.      |++..++.+-.+|+.||.|||+++||++|||-
T Consensus       239 t~drlCFVMeyanGGeLf~HLsrer~------FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKL  296 (516)
T KOG0690|consen  239 TQDRLCFVMEYANGGELFFHLSRERV------FSEDRTRFYGAEIVSALGYLHSRNIVYRDLKL  296 (516)
T ss_pred             cCceEEEEEEEccCceEeeehhhhhc------ccchhhhhhhHHHHHHhhhhhhCCeeeeechh
Confidence            99999999999877 89888877553      99999999999999999999999999999983

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.64  E-value=1.4e-15  Score=148.60  Aligned_cols=124  Identities=28%  Similarity=0.311  Sum_probs=110.4

Q ss_pred             eEEEEEeccCCceEEEEEEECCCCcEEEEEEEecCh---hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEEE
Q 008813          416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLF  492 (552)
Q Consensus       416 Y~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk---~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hLy  492 (552)
                      |.+.+.||.|++|.||+|.+..+++.+++|.++...   .....+.+|+.+|+.++|      +||+++++++.....++
T Consensus         1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~------~~i~~~~~~~~~~~~~~   74 (283)
T cd05118           1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNH------PNIIKLLDVFRHKGDLY   74 (283)
T ss_pred             CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcC------CCcchHHHhhccCCCEE
Confidence            567889999999999999999899999999987542   234677889999999998      99999999999999999


Q ss_pred             EEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          493 IVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       493 IVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      +||||+.++|.+++.....     ++++..+..++.||+.||.|||+++|+|.+|++-
T Consensus        75 ~v~e~~~~~l~~~l~~~~~-----~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~  127 (283)
T cd05118          75 LVFEFMDTDLYKLIKDRQR-----GLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPE  127 (283)
T ss_pred             EEEeccCCCHHHHHHhhcc-----cCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHH
Confidence            9999999999998887542     2899999999999999999999999999999863

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.64  E-value=1.6e-15  Score=149.13  Aligned_cols=120  Identities=16%  Similarity=0.122  Sum_probs=99.7

Q ss_pred             EEeccCCceEEEEEEECC------------CCcEEEEEEEecCh-hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEE
Q 008813          420 EYLGSAAFSKVFQAQDLH------------TGVDVCLKIIKNDK-DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFY  486 (552)
Q Consensus       420 e~LGkG~FG~VykA~Dkk------------tg~~VAVKIIk~sk-~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~  486 (552)
                      +.||+|+||+||+|....            ....|++|++.... .....+..|+.+++.++|      |||+++++++.
T Consensus         1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~h------p~iv~~~~~~~   74 (262)
T cd05077           1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSH------KHIVLLYGVCV   74 (262)
T ss_pred             CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCC------CCEeeEEEEEe
Confidence            368999999999997432            23458899887542 234467788899999998      99999999999


Q ss_pred             eCCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          487 HLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       487 ~~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      .....++||||+.+ +|..++.....     ++++..++.|+.||+.||.|||+++|||++||+-
T Consensus        75 ~~~~~~lv~e~~~~~~l~~~~~~~~~-----~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~  134 (262)
T cd05077          75 RDVENIMVEEFVEFGPLDLFMHRKSD-----VLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTK  134 (262)
T ss_pred             cCCCCEEEEecccCCCHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcc
Confidence            99999999999987 78777765432     2899999999999999999999999999999974

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.64  E-value=2.2e-15  Score=146.64  Aligned_cols=117  Identities=21%  Similarity=0.191  Sum_probs=100.8

Q ss_pred             EeccCCceEEEEEEE--CCCCcEEEEEEEecC---hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEEEEEE
Q 008813          421 YLGSAAFSKVFQAQD--LHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVC  495 (552)
Q Consensus       421 ~LGkG~FG~VykA~D--kktg~~VAVKIIk~s---k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hLyIVm  495 (552)
                      .||+|+||.||+|.+  ..+++.+|||+++..   ....+.+.+|+.+++.+.|      +||+++++++. .+..++||
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h------~~i~~~~~~~~-~~~~~lv~   74 (257)
T cd05116           2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDN------PYIVRMIGICE-AESWMLVM   74 (257)
T ss_pred             cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCC------CCcceEEEEEc-CCCcEEEE
Confidence            589999999999965  456789999998754   3345678899999999998      99999999875 45679999


Q ss_pred             ecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          496 ELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       496 Ell~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      ||+.+ +|.+++.....      +++..+..++.||+.||.|||++||+|++||+-
T Consensus        75 e~~~~~~L~~~l~~~~~------~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~  124 (257)
T cd05116          75 ELAELGPLNKFLQKNKH------VTEKNITELVHQVSMGMKYLEETNFVHRDLAAR  124 (257)
T ss_pred             ecCCCCcHHHHHHhcCC------CCHHHHHHHHHHHHHHHHHHHHCCEeecccchh
Confidence            99986 89999876442      899999999999999999999999999999974

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.64  E-value=2.4e-15  Score=148.71  Aligned_cols=124  Identities=19%  Similarity=0.285  Sum_probs=107.4

Q ss_pred             ceEEEEEeccCCceEEEEEEEC---CCCcEEEEEEEecCh-----hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEE
Q 008813          415 RYYVTEYLGSAAFSKVFQAQDL---HTGVDVCLKIIKNDK-----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFY  486 (552)
Q Consensus       415 RY~Ile~LGkG~FG~VykA~Dk---ktg~~VAVKIIk~sk-----~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~  486 (552)
                      +|++.+.||+|+||.||++++.   .+++.||||+++...     ...+.+.+|+.++.++.+|     +||+++++.+.
T Consensus         1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~-----~~i~~~~~~~~   75 (288)
T cd05583           1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRC-----PFLVTLHYAFQ   75 (288)
T ss_pred             CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCC-----cchhhhheeee
Confidence            4889999999999999999864   467889999997532     2235677899999999754     99999999999


Q ss_pred             eCCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          487 HLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       487 ~~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ....+||||||+.+ +|.+++.....      +++..++.++.|++.||.|||+.+|+|.+|++
T Consensus        76 ~~~~~~lv~e~~~~~~L~~~~~~~~~------~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p  133 (288)
T cd05583          76 TDTKLHLILDYVNGGELFTHLYQREH------FTESEVRVYIAEIVLALDHLHQLGIIYRDIKL  133 (288)
T ss_pred             cCCEEEEEEecCCCCcHHHHHhhcCC------cCHHHHHHHHHHHHHHHHHHHHCCeeccCCCH
Confidence            99999999999987 99998876432      89999999999999999999999999999985

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.64  E-value=1.1e-15  Score=156.61  Aligned_cols=125  Identities=24%  Similarity=0.309  Sum_probs=110.5

Q ss_pred             ecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC---hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeC
Q 008813          412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL  488 (552)
Q Consensus       412 i~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s---k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~  488 (552)
                      +.++|+++..||+|+||.||+|++..+++.||||++...   ......+.+|+.+++.+.|      +||+++++++...
T Consensus        13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h------~~iv~~~~~~~~~   86 (343)
T cd07851          13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDH------ENVIGLLDVFTPA   86 (343)
T ss_pred             ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccC------CCHHHHHHHhhcc
Confidence            457899999999999999999999999999999998653   2334567889999999988      9999999988766


Q ss_pred             CE------EEEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          489 EH------LFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       489 ~h------LyIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      +.      +++|||+++++|.+++....       +++..++.++.||+.||.|||++||+|++|++
T Consensus        87 ~~~~~~~~~~lv~e~~~~~L~~~~~~~~-------l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp  146 (343)
T cd07851          87 SSLEDFQDVYLVTHLMGADLNNIVKCQK-------LSDDHIQFLVYQILRGLKYIHSAGIIHRDLKP  146 (343)
T ss_pred             ccccccccEEEEEecCCCCHHHHHhcCC-------CCHHHHHHHHHHHHHHHHHHHHCCeecCCCCH
Confidence            54      99999999889999987532       89999999999999999999999999999986

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.63  E-value=2.5e-15  Score=148.56  Aligned_cols=131  Identities=22%  Similarity=0.277  Sum_probs=109.6

Q ss_pred             cCceEEEEEeccCCceEEEEEEEC-----CCCcEEEEEEEecC-hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEE
Q 008813          413 AGRYYVTEYLGSAAFSKVFQAQDL-----HTGVDVCLKIIKND-KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFY  486 (552)
Q Consensus       413 ~~RY~Ile~LGkG~FG~VykA~Dk-----ktg~~VAVKIIk~s-k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~  486 (552)
                      ..+|++.+.||+|+||.||++...     .++..+|+|.++.. ......+.+|+++++.+.|      +||+++++++.
T Consensus         4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h------~~i~~~~~~~~   77 (280)
T cd05092           4 RRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQH------QHIVRFYGVCT   77 (280)
T ss_pred             hHhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCC------CCCceEEEEEe
Confidence            357889999999999999999743     34678999988754 3345678899999999998      99999999999


Q ss_pred             eCCEEEEEEecCCC-CHHHHHHhhccC---------CCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          487 HLEHLFIVCELLRA-NLYEFQKFNQES---------GGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       487 ~~~hLyIVmEll~G-sL~d~Lk~~~~~---------g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      .....++||||+.+ +|.+++......         .....+++..++.++.||+.||.|||++||+|.+|++
T Consensus        78 ~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp  150 (280)
T cd05092          78 EGRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLAT  150 (280)
T ss_pred             cCCceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeecccccH
Confidence            99999999999986 999999864310         0011278999999999999999999999999999996

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.63  E-value=3.2e-15  Score=151.18  Aligned_cols=126  Identities=13%  Similarity=0.163  Sum_probs=110.8

Q ss_pred             cCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC----hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeC
Q 008813          413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND----KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL  488 (552)
Q Consensus       413 ~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s----k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~  488 (552)
                      .+.|...+.||+|+||.||+|.+..+++.|+||++...    ......+.+|+.+++.++|      +||+++++++...
T Consensus        20 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h------~~iv~~~~~~~~~   93 (313)
T cd06633          20 EEIFVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKH------PNTIEYKGCYLKE   93 (313)
T ss_pred             HHHhhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCC------CCCccEEEEEEeC
Confidence            34577788999999999999999999999999998743    2233567889999999998      9999999999999


Q ss_pred             CEEEEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          489 EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       489 ~hLyIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ...|+||||+.++|.+++.....     ++++..++.++.||+.||.|||++||+|.+|++
T Consensus        94 ~~~~lv~e~~~~~l~~~l~~~~~-----~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p  149 (313)
T cd06633          94 HTAWLVMEYCLGSASDLLEVHKK-----PLQEVEIAAITHGALQGLAYLHSHNMIHRDIKA  149 (313)
T ss_pred             CEEEEEEecCCCCHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCh
Confidence            99999999999999888876442     289999999999999999999999999999986

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.63  E-value=3.1e-15  Score=144.09  Aligned_cols=118  Identities=20%  Similarity=0.243  Sum_probs=102.5

Q ss_pred             EEeccCCceEEEEEEECCCCcEEEEEEEecC--hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEEEEEEec
Q 008813          420 EYLGSAAFSKVFQAQDLHTGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCEL  497 (552)
Q Consensus       420 e~LGkG~FG~VykA~Dkktg~~VAVKIIk~s--k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hLyIVmEl  497 (552)
                      ++||+|+||.||+|... .++.+|+|+++..  ......+.+|+.+++.++|      +||+++++++...+..++||||
T Consensus         1 ~~ig~g~~g~vy~~~~~-~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h------~~i~~~~~~~~~~~~~~lv~e~   73 (250)
T cd05085           1 ELLGKGNFGEVFKGTLK-DKTPVAVKTCKEDLPQELKIKFLSEARILKQYDH------PNIVKLIGVCTQRQPIYIVMEL   73 (250)
T ss_pred             CccCCCCCceEEEEEec-CCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCC------CCcCeEEEEEecCCccEEEEEC
Confidence            36899999999999854 6788999998754  2233467899999999988      9999999999999999999999


Q ss_pred             CCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          498 LRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       498 l~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      +.+ +|.+++.....     .+++..+..++.|++.||.|||++|++|.+|++
T Consensus        74 ~~~~~L~~~~~~~~~-----~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p  121 (250)
T cd05085          74 VPGGDFLSFLRKKKD-----ELKTKQLVKFALDAAAGMAYLESKNCIHRDLAA  121 (250)
T ss_pred             CCCCcHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHhCCeeecccCh
Confidence            976 99998875442     278999999999999999999999999999986

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.63  E-value=3.6e-15  Score=148.30  Aligned_cols=131  Identities=18%  Similarity=0.213  Sum_probs=109.3

Q ss_pred             CceEEEEEeccCCceEEEEEEEC-----CCCcEEEEEEEecChh-hHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEe
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDL-----HTGVDVCLKIIKNDKD-FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH  487 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dk-----ktg~~VAVKIIk~sk~-~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~  487 (552)
                      ++|.+.+.||+|+||.||+|.+.     .++..+++|.+..... ..+.+.+|+.++++++|      +||+++++++..
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h------~~i~~~~~~~~~   78 (291)
T cd05094           5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQH------EHIVKFYGVCGD   78 (291)
T ss_pred             HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCC------CCcceEEEEEcc
Confidence            56999999999999999999854     3456789999875432 34578899999999998      999999999999


Q ss_pred             CCEEEEEEecCCC-CHHHHHHhhccC----------CCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          488 LEHLFIVCELLRA-NLYEFQKFNQES----------GGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       488 ~~hLyIVmEll~G-sL~d~Lk~~~~~----------g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      ...+++||||+.+ +|.+++......          .....+++..++.++.||+.||.|||++||+|++|++-
T Consensus        79 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~  152 (291)
T cd05094          79 GDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATR  152 (291)
T ss_pred             CCceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcc
Confidence            9999999999976 999999764310          00012789999999999999999999999999999963

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.63  E-value=2.7e-15  Score=146.96  Aligned_cols=123  Identities=15%  Similarity=0.063  Sum_probs=102.0

Q ss_pred             EeccCCceEEEEEEEC--CCCcEEEEEEEecCh--hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEEEEEEe
Q 008813          421 YLGSAAFSKVFQAQDL--HTGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCE  496 (552)
Q Consensus       421 ~LGkG~FG~VykA~Dk--ktg~~VAVKIIk~sk--~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hLyIVmE  496 (552)
                      .||+|+||.||+|...  .++..+|+|.++...  .....+.+|+.+++.++|      +||+++++++.....+++|||
T Consensus         2 ~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h------~~iv~~~~~~~~~~~~~lv~e   75 (269)
T cd05087           2 EIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQH------SNLLQCLGQCTEVTPYLLVME   75 (269)
T ss_pred             cccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCC------CCEeeEEEEEcCCCCcEEEEE
Confidence            6899999999999864  356779999987642  233467889999999998      999999999999999999999


Q ss_pred             cCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          497 LLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       497 ll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      |+.+ +|.+++....... ...+++..++.++.||+.||.|||+++|+|++||+-
T Consensus        76 ~~~~g~L~~~l~~~~~~~-~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~  129 (269)
T cd05087          76 FCPLGDLKGYLRSCRKAE-LMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALR  129 (269)
T ss_pred             CCCCCcHHHHHHHhhhcc-cccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcc
Confidence            9986 9999997643211 112577788899999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.63  E-value=3.2e-16  Score=171.76  Aligned_cols=130  Identities=25%  Similarity=0.420  Sum_probs=110.6

Q ss_pred             eCceecCce-EEEEEeccCCceEEEEEEECCCCcEEEEEEEec-----ChhhHHHHHHHHHHHHHhcccCCCCCCCeeEe
Q 008813          408 LNTVIAGRY-YVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKN-----DKDFFDQSLDEIKLLKLVNKNDPADEHHILRL  481 (552)
Q Consensus       408 ~gdvi~~RY-~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~-----sk~~~~~~lrEIkILk~L~hhd~~d~pnIVrL  481 (552)
                      +.....+|| +...+||+|+|-+||+|.|..+|..||--.++.     ....++++..|+++|+.|+|      +|||++
T Consensus        33 ve~~p~gRy~k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H------~NIirf  106 (632)
T KOG0584|consen   33 VEKDPTGRYLKFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKH------PNIIRF  106 (632)
T ss_pred             cccCCCCceeehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCC------Cceeee
Confidence            334455787 446789999999999999999999998433332     34456889999999999999      999999


Q ss_pred             EeEEEeCC--EEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCC--Ceeeeccc
Q 008813          482 YDYFYHLE--HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLL--VIYFILFC  549 (552)
Q Consensus       482 ~d~F~~~~--hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~g--IIH~~L~~  549 (552)
                      |++|.+..  .+-+|+|++.. +|.+|+++.+.      +..+.++.|++|||+||.|||++.  |||+||||
T Consensus       107 y~SW~d~~n~~in~iTEL~TSGtLr~Y~kk~~~------vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKC  173 (632)
T KOG0584|consen  107 YDSWVDTDNKTINFITELFTSGTLREYRKKHRR------VNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKC  173 (632)
T ss_pred             eeheecCCCceeeeeeecccCCcHHHHHHHhcc------CCHHHHHHHHHHHHHHhhhhhcCCCCcccccccc
Confidence            99998664  48899999864 99999998876      789999999999999999999986  99999999

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.63  E-value=3.4e-15  Score=146.60  Aligned_cols=126  Identities=18%  Similarity=0.191  Sum_probs=104.2

Q ss_pred             EEeccCCceEEEEEEECCCCc--EEEEEEEecC--hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEEEEEE
Q 008813          420 EYLGSAAFSKVFQAQDLHTGV--DVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVC  495 (552)
Q Consensus       420 e~LGkG~FG~VykA~Dkktg~--~VAVKIIk~s--k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hLyIVm  495 (552)
                      +.||+|+||.||+|++..++.  .+|+|.++..  ......+.+|+.+++++.+|     |||+++++++...+.+|+||
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h-----~~iv~~~~~~~~~~~~~lv~   75 (270)
T cd05047           1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHH-----PNIINLLGACEHRGYLYLAI   75 (270)
T ss_pred             CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccC-----CCeeeEEEEEecCCCceEEE
Confidence            368999999999999988775  4688888742  33456788999999999544     99999999999999999999


Q ss_pred             ecCCC-CHHHHHHhhccCC----------CCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          496 ELLRA-NLYEFQKFNQESG----------GEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       496 Ell~G-sL~d~Lk~~~~~g----------~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      ||+.+ +|.++++.++...          ....+++..++.++.||+.||+|||++||+|+||++-
T Consensus        76 e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~  141 (270)
T cd05047          76 EYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAAR  141 (270)
T ss_pred             EeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccc
Confidence            99976 9999998653210          0113789999999999999999999999999999963

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=99.63  E-value=9.8e-16  Score=153.44  Aligned_cols=123  Identities=16%  Similarity=0.205  Sum_probs=108.3

Q ss_pred             CceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecCh-hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEEE
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK-DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLF  492 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk-~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hLy  492 (552)
                      +.|.....||+|+||.||++.+..++..||||.+.... ...+.+.+|+.+++.++|      +||+++++.+...++.|
T Consensus        22 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h------~~ii~~~~~~~~~~~~~   95 (292)
T cd06658          22 EYLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHH------ENVVDMYNSYLVGDELW   95 (292)
T ss_pred             HHHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCC------CcHHHHHHheecCCeEE
Confidence            44566678999999999999999999999999987542 334568899999999998      99999999999999999


Q ss_pred             EEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          493 IVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       493 IVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      +||||+.+ +|.+++....       +++..++.++.||+.||.|||+++|||.+|++
T Consensus        96 lv~e~~~~~~L~~~~~~~~-------l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp  146 (292)
T cd06658          96 VVMEFLEGGALTDIVTHTR-------MNEEQIATVCLSVLRALSYLHNQGVIHRDIKS  146 (292)
T ss_pred             EEEeCCCCCcHHHHHhcCC-------CCHHHHHHHHHHHHHHHHHHHHCCEeecCCCH
Confidence            99999987 8888875432       88999999999999999999999999999986

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.63  E-value=3e-15  Score=145.38  Aligned_cols=118  Identities=20%  Similarity=0.191  Sum_probs=102.5

Q ss_pred             EEeccCCceEEEEEEECCCC---cEEEEEEEecChh--hHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEEEEE
Q 008813          420 EYLGSAAFSKVFQAQDLHTG---VDVCLKIIKNDKD--FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIV  494 (552)
Q Consensus       420 e~LGkG~FG~VykA~Dkktg---~~VAVKIIk~sk~--~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hLyIV  494 (552)
                      ++||+|+||.||+|.+..+.   ..+|+|+++....  ..+.+.+|+.+++.+.|      +||+++++++. .++.++|
T Consensus         1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h------~~iv~~~~~~~-~~~~~~v   73 (257)
T cd05060           1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDH------PCIVRLIGVCK-GEPLMLV   73 (257)
T ss_pred             CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCC------CCeeeEEEEEc-CCceEEE
Confidence            47999999999999876554   7899999986533  44678899999999998      99999999775 5578999


Q ss_pred             EecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          495 CELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       495 mEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      |||+.+ +|.+++.....      +++..+..++.|++.||.|||.++|+|.+|++-
T Consensus        74 ~e~~~~~~L~~~l~~~~~------~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~  124 (257)
T cd05060          74 MELAPLGPLLKYLKKRRE------IPVSDLKELAHQVAMGMAYLESKHFVHRDLAAR  124 (257)
T ss_pred             EEeCCCCcHHHHHHhCCC------CCHHHHHHHHHHHHHHHHHHhhcCeeccCcccc
Confidence            999876 99999987652      899999999999999999999999999999974

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.63  E-value=3.2e-15  Score=144.09  Aligned_cols=119  Identities=20%  Similarity=0.232  Sum_probs=105.2

Q ss_pred             EEeccCCceEEEEEEECCCCcEEEEEEEecC--hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEEEEEEec
Q 008813          420 EYLGSAAFSKVFQAQDLHTGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCEL  497 (552)
Q Consensus       420 e~LGkG~FG~VykA~Dkktg~~VAVKIIk~s--k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hLyIVmEl  497 (552)
                      ++||+|+||.||+|.+.. ++.||+|+++..  ......+.+|+++++.++|      +||+++++++...++.++|||+
T Consensus         1 ~~lg~g~~g~v~~~~~~~-~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~------~~i~~~~~~~~~~~~~~~v~e~   73 (251)
T cd05041           1 EKIGKGNFGDVYKGVLKG-NTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDH------PNIVKLIGVCVQKQPIYIVMEL   73 (251)
T ss_pred             CccccCCCceEEEEEEeC-CCcEEEEeccccCCHHHHHHHHHHHHHHHhCCC------CCeEEEEEEEecCCCeEEEEEc
Confidence            368999999999999887 999999998764  2245678899999999998      9999999999999999999999


Q ss_pred             CCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          498 LRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       498 l~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      +.+ +|.+++.....     .+++..+..++.|++.||.|||+++|+|++|++-
T Consensus        74 ~~~~~l~~~l~~~~~-----~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~  122 (251)
T cd05041          74 VPGGSLLTFLRKKKN-----RLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAAR  122 (251)
T ss_pred             CCCCcHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcc
Confidence            976 89999876542     2789999999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.63  E-value=1.5e-15  Score=160.24  Aligned_cols=125  Identities=14%  Similarity=0.161  Sum_probs=107.8

Q ss_pred             CceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChhh-HHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCC-EE
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDF-FDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE-HL  491 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~~-~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~-hL  491 (552)
                      +.|.-...||+|+||.||+|.-.. ++.||||.+...... ...+.+|+.+|.+++|      +|||+|++||...+ +.
T Consensus        75 ~~Fs~~~~ig~Ggfg~VYkG~l~~-~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H------~Nlv~LlGyC~e~~~~~  147 (361)
T KOG1187|consen   75 NNFSESNLIGEGGFGTVYKGVLSD-GTVVAVKRLSSNSGQGEREFLNEVEILSRLRH------PNLVKLLGYCLEGGEHR  147 (361)
T ss_pred             hCCchhcceecCCCeEEEEEEECC-CCEEEEEEecCCCCcchhHHHHHHHHHhcCCC------cCcccEEEEEecCCceE
Confidence            456666899999999999997654 489999988765443 4569999999999998      99999999999888 69


Q ss_pred             EEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCC---Ceeeeccc
Q 008813          492 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLL---VIYFILFC  549 (552)
Q Consensus       492 yIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~g---IIH~~L~~  549 (552)
                      +||+|||.. +|.++|......    ++++.....|+.+++.||+|||...   |||+|||+
T Consensus       148 ~LVYEym~nGsL~d~L~~~~~~----~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKs  205 (361)
T KOG1187|consen  148 LLVYEYMPNGSLEDHLHGKKGE----PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKS  205 (361)
T ss_pred             EEEEEccCCCCHHHHhCCCCCC----CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCH
Confidence            999999986 999999875431    4899999999999999999999754   99999996

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=99.63  E-value=2.7e-15  Score=148.59  Aligned_cols=125  Identities=17%  Similarity=0.164  Sum_probs=103.9

Q ss_pred             CceEEEEEeccCCceEEEEEEECCCCc----EEEEEEEecC--hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEe
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLHTGV----DVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH  487 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkktg~----~VAVKIIk~s--k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~  487 (552)
                      +.|++++.||+|+||.||+|.+..+++    .+++|.+...  +.....+..|+.+++.+.|      +||+++++++. 
T Consensus         7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h------~~iv~~~~~~~-   79 (279)
T cd05111           7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDH------AYIVRLLGICP-   79 (279)
T ss_pred             hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCC------CCcceEEEEEC-
Confidence            568899999999999999999887765    4777777543  2234567778888888888      99999999875 


Q ss_pred             CCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          488 LEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       488 ~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      ...+++|||++.+ +|.+++.....     ++++..+..|+.||+.||.|||+++|+|++||+-
T Consensus        80 ~~~~~~i~e~~~~gsL~~~l~~~~~-----~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~  138 (279)
T cd05111          80 GASLQLVTQLSPLGSLLDHVRQHRD-----SLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAAR  138 (279)
T ss_pred             CCccEEEEEeCCCCcHHHHHHhccc-----CCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcc
Confidence            4567889999875 99999986543     2899999999999999999999999999999974

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.63  E-value=5e-15  Score=146.86  Aligned_cols=120  Identities=18%  Similarity=0.232  Sum_probs=97.7

Q ss_pred             EeccCCceEEEEEEECCCCcEEEEEEEecCh----hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEEEEEEe
Q 008813          421 YLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCE  496 (552)
Q Consensus       421 ~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk----~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hLyIVmE  496 (552)
                      .||+|+||.||+|.+..+++.||||++....    ........|..+++.+++   .++++|+++++++...+.+|+|||
T Consensus         1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~i~~~~~~~~~~~~~~~v~e   77 (278)
T cd05606           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST---GDCPFIVCMSYAFHTPDKLSFILD   77 (278)
T ss_pred             CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHh---CCCCcEeeeeeeeecCCEEEEEEe
Confidence            4899999999999999999999999987532    111223445544444432   123999999999999999999999


Q ss_pred             cCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          497 LLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       497 ll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      |+.+ +|.+++.....      +++..++.|+.|++.||.|||+++|+|++|++
T Consensus        78 ~~~g~~L~~~l~~~~~------l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p  125 (278)
T cd05606          78 LMNGGDLHYHLSQHGV------FSEAEMRFYAAEIILGLEHMHNRFVVYRDLKP  125 (278)
T ss_pred             cCCCCcHHHHHHhcCC------CCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCH
Confidence            9987 89888875432      89999999999999999999999999999986

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.63  E-value=1.4e-15  Score=148.53  Aligned_cols=124  Identities=25%  Similarity=0.264  Sum_probs=111.4

Q ss_pred             eEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC---hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEEE
Q 008813          416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLF  492 (552)
Q Consensus       416 Y~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s---k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hLy  492 (552)
                      |++.+.||+|+||.||+|.+..+++.||+|++...   ....+...+|+.+++.++|      +||+++++++...+.++
T Consensus         1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~------~~i~~~~~~~~~~~~~~   74 (282)
T cd07829           1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKH------PNIVKLLDVIHTERKLY   74 (282)
T ss_pred             CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCC------CCHHHHHhhhhcCCceE
Confidence            56788999999999999999999999999999864   3344667889999999998      99999999999999999


Q ss_pred             EEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          493 IVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       493 IVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      +|||++.++|.+++.....     .+++..++.++.|++.||.|||++||+|.+|++-
T Consensus        75 ~v~e~~~~~l~~~i~~~~~-----~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~  127 (282)
T cd07829          75 LVFEYCDMDLKKYLDKRPG-----PLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQ  127 (282)
T ss_pred             EEecCcCcCHHHHHHhhcc-----CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChh
Confidence            9999999999999987632     2899999999999999999999999999999873

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=99.63  E-value=3.9e-15  Score=147.00  Aligned_cols=120  Identities=17%  Similarity=0.152  Sum_probs=99.0

Q ss_pred             ceEEEEEe--ccCCceEEEEEEECCCCcEEEEEEEecChhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEEE
Q 008813          415 RYYVTEYL--GSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLF  492 (552)
Q Consensus       415 RY~Ile~L--GkG~FG~VykA~Dkktg~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hLy  492 (552)
                      +|.+.+.+  |+|+||.||+++++.+++.+|+|++.....  .  ..|+.+...+.+|     +||+++++.|...+.+|
T Consensus        15 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~--~--~~e~~~~~~~~~h-----~~iv~~~~~~~~~~~~~   85 (267)
T PHA03390         15 NCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNF--N--AIEPMVHQLMKDN-----PNFIKLYYSVTTLKGHV   85 (267)
T ss_pred             hhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhc--c--hhhHHHHHHhhcC-----CCEEEEEEEEecCCeeE
Confidence            45555554  999999999999999999999999975421  1  1233333333333     99999999999999999


Q ss_pred             EEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          493 IVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       493 IVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      +||||+.+ +|.++++.+..      +++..++.++.||+.||.|||++||+|++|++
T Consensus        86 iv~e~~~~~~L~~~l~~~~~------l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p  137 (267)
T PHA03390         86 LIMDYIKDGDLFDLLKKEGK------LSEAEVKKIIRQLVEALNDLHKHNIIHNDIKL  137 (267)
T ss_pred             EEEEcCCCCcHHHHHHhcCC------CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCH
Confidence            99999976 99999987642      89999999999999999999999999999986

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.62  E-value=1.3e-15  Score=150.05  Aligned_cols=132  Identities=15%  Similarity=0.122  Sum_probs=108.9

Q ss_pred             CceEEEEEeccCCceEEEEEEECCC-----CcEEEEEEEecCh--hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEE
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLHT-----GVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFY  486 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkkt-----g~~VAVKIIk~sk--~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~  486 (552)
                      .+|++++.||+|+||.||+|.+..+     ++.||||+++...  .....+.+|+.++..++|      +||+++++++.
T Consensus         5 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h------~~iv~~~~~~~   78 (283)
T cd05091           5 STVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQH------PNIVCLLGVVT   78 (283)
T ss_pred             HHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCC------CCcCeEEEEEc
Confidence            4578889999999999999987543     5789999997542  334668899999999998      99999999999


Q ss_pred             eCCEEEEEEecCCC-CHHHHHHhhccC----------CCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccccC
Q 008813          487 HLEHLFIVCELLRA-NLYEFQKFNQES----------GGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCFS  551 (552)
Q Consensus       487 ~~~hLyIVmEll~G-sL~d~Lk~~~~~----------g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~~  551 (552)
                      ....+++++||+.+ +|.+++......          .....+++..++.++.||+.||.|||++||+|+|||+-.
T Consensus        79 ~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~N  154 (283)
T cd05091          79 KEQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRN  154 (283)
T ss_pred             CCCceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchhh
Confidence            99999999999987 899998632100          001237889999999999999999999999999999743

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.62  E-value=6.7e-15  Score=144.71  Aligned_cols=132  Identities=16%  Similarity=0.128  Sum_probs=109.9

Q ss_pred             cCceEEEEEeccCCceEEEEEEECC----CCcEEEEEEEecC--hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEE
Q 008813          413 AGRYYVTEYLGSAAFSKVFQAQDLH----TGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFY  486 (552)
Q Consensus       413 ~~RY~Ile~LGkG~FG~VykA~Dkk----tg~~VAVKIIk~s--k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~  486 (552)
                      ..+|++.+.||+|+||.||+|.+..    ++..|++|+++..  ......+.+|+.+++.++|      +||+++++++.
T Consensus         5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h------~ni~~~~~~~~   78 (280)
T cd05043           5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSH------QNILPILHVCI   78 (280)
T ss_pred             hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCC------CCCCeEEEEEe
Confidence            4689999999999999999999876    3578999998754  3335678899999999988      99999999876


Q ss_pred             e-CCEEEEEEecCCC-CHHHHHHhhccCC--CCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          487 H-LEHLFIVCELLRA-NLYEFQKFNQESG--GEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       487 ~-~~hLyIVmEll~G-sL~d~Lk~~~~~g--~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      . ....++++|++.+ +|.+++.......  ....+++..++.++.||+.||.|||+++|+|++|++-
T Consensus        79 ~~~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~  146 (280)
T cd05043          79 EDGEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAAR  146 (280)
T ss_pred             cCCCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCHh
Confidence            5 4678999999875 9999987653210  0123899999999999999999999999999999973

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=99.61  E-value=2.2e-15  Score=151.29  Aligned_cols=121  Identities=15%  Similarity=0.223  Sum_probs=106.1

Q ss_pred             eEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC-hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEEEEE
Q 008813          416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND-KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIV  494 (552)
Q Consensus       416 Y~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s-k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hLyIV  494 (552)
                      |.....||+|+||.||++.+..+++.||||++... ....+.+.+|+.+++.+.|      |||+++++.+...+.+|+|
T Consensus        23 ~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h------p~i~~~~~~~~~~~~~~iv   96 (297)
T cd06659          23 LENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQH------QNVVEMYKSYLVGEELWVL   96 (297)
T ss_pred             HHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCC------CchhhhhhheeeCCeEEEE
Confidence            33445799999999999999999999999998753 2234568899999999998      9999999999999999999


Q ss_pred             EecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          495 CELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       495 mEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      |||+.+ +|..++....       +++..++.++.||+.||.|||++||+|++|++
T Consensus        97 ~e~~~~~~L~~~~~~~~-------~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p  145 (297)
T cd06659          97 MEFLQGGALTDIVSQTR-------LNEEQIATVCESVLQALCYLHSQGVIHRDIKS  145 (297)
T ss_pred             EecCCCCCHHHHHhhcC-------CCHHHHHHHHHHHHHHHHHHHhCCeecCCCCH
Confidence            999987 8988776532       89999999999999999999999999999986

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]

Probab=99.61  E-value=1.8e-16  Score=157.60  Aligned_cols=140  Identities=16%  Similarity=0.199  Sum_probs=119.2

Q ss_pred             ccCCCccCCCCCcceeeCceecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChhhHHHHHHHHHHHHHhcccC
Q 008813          392 RKNRTGFEENKDLPIILNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKND  471 (552)
Q Consensus       392 ~k~~~gfde~~~y~v~~gdvi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd  471 (552)
                      ...+..+.+.+.+.+.+|.  .+.|++++++|+|.|+.||.|....+.+.+.||+++.-+.  +.+.||++||+.|..+ 
T Consensus        18 ~~rp~eYWdYE~~~i~wg~--~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVkk--kKIkREikIL~nL~gg-   92 (338)
T KOG0668|consen   18 EERPREYWDYESLVIDWGN--QDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVKK--KKIKREIKILQNLRGG-   92 (338)
T ss_pred             ccCchhhcchhheeeeccc--cchHHHHHHHcCccHhhHhcccccCCCceEEEeeechHHH--HHHHHHHHHHHhccCC-
Confidence            3445556666667777774  4689999999999999999999999999999999986443  6789999999999965 


Q ss_pred             CCCCCCeeEeEeEEEeC--CEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecc
Q 008813          472 PADEHHILRLYDYFYHL--EHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILF  548 (552)
Q Consensus       472 ~~d~pnIVrL~d~F~~~--~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~  548 (552)
                          ||||+|++...++  ....||+|++.. +...+...         |+...|+.++.|++.||.|+|++||+|+|.|
T Consensus        93 ----~NIi~L~DiV~Dp~SktpaLiFE~v~n~Dfk~ly~t---------l~d~dIryY~~elLkALdyCHS~GImHRDVK  159 (338)
T KOG0668|consen   93 ----PNIIKLLDIVKDPESKTPSLIFEYVNNTDFKQLYPT---------LTDYDIRYYIYELLKALDYCHSMGIMHRDVK  159 (338)
T ss_pred             ----CCeeehhhhhcCccccCchhHhhhhccccHHHHhhh---------hchhhHHHHHHHHHHHHhHHHhcCcccccCC
Confidence                9999999999866  468899999998 66665443         8889999999999999999999999999998


Q ss_pred             c
Q 008813          549 C  549 (552)
Q Consensus       549 ~  549 (552)
                      +
T Consensus       160 P  160 (338)
T KOG0668|consen  160 P  160 (338)
T ss_pred             c
Confidence            7

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.61  E-value=5.4e-15  Score=143.03  Aligned_cols=120  Identities=22%  Similarity=0.272  Sum_probs=103.5

Q ss_pred             EEeccCCceEEEEEEECC-CC--cEEEEEEEecCh--hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEEEEE
Q 008813          420 EYLGSAAFSKVFQAQDLH-TG--VDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIV  494 (552)
Q Consensus       420 e~LGkG~FG~VykA~Dkk-tg--~~VAVKIIk~sk--~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hLyIV  494 (552)
                      +.||+|++|.||+|.+.. .+  ..||||+++...  ...+.+.+|+.++++++|      +||+++++.+.. ..+++|
T Consensus         1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h------~~iv~~~~~~~~-~~~~~v   73 (257)
T cd05040           1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDH------ENLIRLYGVVLT-HPLMMV   73 (257)
T ss_pred             CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCC------CCccceeEEEcC-CeEEEE
Confidence            368999999999999865 33  369999998753  345678899999999998      999999999988 899999


Q ss_pred             EecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          495 CELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       495 mEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      ||++.+ +|.+++......    .+++..++.++.|++.||.|||+++|+|.+|++-
T Consensus        74 ~e~~~~~~L~~~l~~~~~~----~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~  126 (257)
T cd05040          74 TELAPLGSLLDRLRKDALG----HFLISTLCDYAVQIANGMRYLESKRFIHRDLAAR  126 (257)
T ss_pred             EEecCCCcHHHHHHhcccc----cCcHHHHHHHHHHHHHHHHHHHhCCccccccCcc
Confidence            999976 999999876421    2899999999999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.61  E-value=1.1e-14  Score=145.02  Aligned_cols=123  Identities=17%  Similarity=0.189  Sum_probs=108.6

Q ss_pred             ceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecCh-hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEEEE
Q 008813          415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK-DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFI  493 (552)
Q Consensus       415 RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk-~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hLyI  493 (552)
                      +|...+.||+|++|.||++.+..+++.++||++.... ...+.+.+|+.+++.++|      +||+++++++...++.|+
T Consensus        20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h------~~vv~~~~~~~~~~~~~~   93 (285)
T cd06648          20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQH------PNIVEMYSSYLVGDELWV   93 (285)
T ss_pred             hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCC------CChheEEEEEEcCCeEEE
Confidence            4555679999999999999999899999999987542 234567899999999998      999999999999999999


Q ss_pred             EEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          494 VCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       494 VmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      |+||+.+ +|.+++...+       +++..+..++.||+.||.|||++||+|++|++-
T Consensus        94 v~e~~~~~~L~~~~~~~~-------~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~  144 (285)
T cd06648          94 VMEFLEGGALTDIVTHTR-------MNEEQIATVCLAVLKALSFLHAQGVIHRDIKSD  144 (285)
T ss_pred             EEeccCCCCHHHHHHhCC-------CCHHHHHHHHHHHHHHHHHHHhCCeecCCCChh
Confidence            9999977 9999988622       899999999999999999999999999999864

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.61  E-value=1.6e-16  Score=168.48  Aligned_cols=124  Identities=21%  Similarity=0.219  Sum_probs=113.6

Q ss_pred             CceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC--hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEE
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL  491 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s--k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hL  491 (552)
                      ..|..++.||+|+||.||+|.+..+++.||||++...  +...+.+..|+.+|..+++      +||.++|+.|.....+
T Consensus        13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~------~~it~yygsyl~g~~L   86 (467)
T KOG0201|consen   13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDS------PNITEYYGSYLKGTKL   86 (467)
T ss_pred             cccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCc------chHHhhhhheeecccH
Confidence            4688889999999999999999999999999999875  3445678899999999998      9999999999999999


Q ss_pred             EEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          492 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       492 yIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ||+||||.| ++.++++....      +.+..+..|+++++.||.|||.++.||+|+|+
T Consensus        87 wiiMey~~gGsv~~lL~~~~~------~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKa  139 (467)
T KOG0201|consen   87 WIIMEYCGGGSVLDLLKSGNI------LDEFEIAVILREVLKGLDYLHSEKKIHRDIKA  139 (467)
T ss_pred             HHHHHHhcCcchhhhhccCCC------CccceeeeehHHHHHHhhhhhhcceecccccc
Confidence            999999988 99999987653      58999999999999999999999999999997

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.61  E-value=3.2e-15  Score=145.58  Aligned_cols=123  Identities=20%  Similarity=0.259  Sum_probs=103.1

Q ss_pred             EeccCCceEEEEEEECCCC------cEEEEEEEecCh--hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEEE
Q 008813          421 YLGSAAFSKVFQAQDLHTG------VDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLF  492 (552)
Q Consensus       421 ~LGkG~FG~VykA~Dkktg------~~VAVKIIk~sk--~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hLy  492 (552)
                      .||+|+||.||+|.+....      +.+|||.+....  .....+.+|+.+++.++|      +||+++++++...+..+
T Consensus         2 ~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h------~~i~~~~~~~~~~~~~~   75 (269)
T cd05044           2 FLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNH------PNIVKLLGVCLLNEPQY   75 (269)
T ss_pred             ccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCC------CCeeeEeeeecCCCCeE
Confidence            6899999999999876433      689999886542  334678899999999998      99999999999999999


Q ss_pred             EEEecCCC-CHHHHHHhhccCC-CCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          493 IVCELLRA-NLYEFQKFNQESG-GEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       493 IVmEll~G-sL~d~Lk~~~~~g-~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      +||||+.+ +|.+++....... ....+++..+..++.||+.||.|||+++|+|.+|++
T Consensus        76 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p  134 (269)
T cd05044          76 IIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAA  134 (269)
T ss_pred             EEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCCh
Confidence            99999986 9999997543211 112378899999999999999999999999999986

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.61  E-value=6.8e-15  Score=144.63  Aligned_cols=122  Identities=15%  Similarity=0.059  Sum_probs=100.1

Q ss_pred             EeccCCceEEEEEEECCC--CcEEEEEEEecC--hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEEEEEEe
Q 008813          421 YLGSAAFSKVFQAQDLHT--GVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCE  496 (552)
Q Consensus       421 ~LGkG~FG~VykA~Dkkt--g~~VAVKIIk~s--k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hLyIVmE  496 (552)
                      .||+|+||.||++.....  ...+++|.++..  ....+.+.+|+.+++.++|      |||+++++.+....++|+|||
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h------~~iv~~~~~~~~~~~~~lv~e   75 (268)
T cd05086           2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQH------PNILQCLGQCVEAIPYLLVFE   75 (268)
T ss_pred             cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCC------cchhheEEEecCCCccEEEEe
Confidence            689999999999975432  344667776643  2344678899999999998      999999999999999999999


Q ss_pred             cCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          497 LLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       497 ll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      |+.+ +|.+++.......  ..+++..++.++.||+.||.|||+++|||++||+-
T Consensus        76 ~~~~~~L~~~l~~~~~~~--~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~  128 (268)
T cd05086          76 YCELGDLKSYLSQEQWHR--RNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALR  128 (268)
T ss_pred             cCCCCcHHHHHHhhhccc--ccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccc
Confidence            9986 9999998653211  12677888999999999999999999999999974

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.61  E-value=5.7e-15  Score=148.77  Aligned_cols=126  Identities=11%  Similarity=0.165  Sum_probs=110.3

Q ss_pred             cCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC----hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeC
Q 008813          413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND----KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL  488 (552)
Q Consensus       413 ~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s----k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~  488 (552)
                      ..+|...+.||+|+||.||++++..+++.+|||.+...    ......+.+|+++++.++|      +||+++++++...
T Consensus        14 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h------~~i~~~~~~~~~~   87 (308)
T cd06634          14 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRH------PNTIQYRGCYLRE   87 (308)
T ss_pred             HHHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCC------CCcccEEEEEEcC
Confidence            34688889999999999999999999999999998642    2234567789999999998      9999999999999


Q ss_pred             CEEEEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          489 EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       489 ~hLyIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ...++||||+.++|.+++.....     ++++..++.++.|++.||.|||+++|+|.+|++
T Consensus        88 ~~~~lv~e~~~~~l~~~~~~~~~-----~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p  143 (308)
T cd06634          88 HTAWLVMEYCLGSASDLLEVHKK-----PLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKA  143 (308)
T ss_pred             CeeEEEEEccCCCHHHHHHHcCC-----CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCH
Confidence            99999999999998888765432     289999999999999999999999999999986

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.60  E-value=5.3e-15  Score=141.89  Aligned_cols=117  Identities=25%  Similarity=0.329  Sum_probs=105.0

Q ss_pred             eccCCceEEEEEEECCCCcEEEEEEEecCh----hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEEEEEEec
Q 008813          422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCEL  497 (552)
Q Consensus       422 LGkG~FG~VykA~Dkktg~~VAVKIIk~sk----~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hLyIVmEl  497 (552)
                      ||+|+||.||++.+..+++.+|+|+++...    .....+.+|+.+++.++|      +||+++++.+.....+|+|||+
T Consensus         1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h------~~i~~~~~~~~~~~~~~~v~e~   74 (250)
T cd05123           1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINH------PFIVKLHYAFQTEEKLYLVLEY   74 (250)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCC------CcHHHHHHHeecCCeeEEEEec
Confidence            699999999999999889999999987642    234578899999999998      9999999999999999999999


Q ss_pred             CCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          498 LRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       498 l~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      +.+ +|.+++.....      +++..+..++.||+.||.|||+++++|.+|++-
T Consensus        75 ~~~~~L~~~l~~~~~------l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~  122 (250)
T cd05123          75 APGGELFSHLSKEGR------FSEERARFYAAEIVLALEYLHSLGIIYRDLKPE  122 (250)
T ss_pred             CCCCcHHHHHHhcCC------CCHHHHHHHHHHHHHHHHHHHHCCceecCCCcc
Confidence            955 99999987643      899999999999999999999999999999873

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.60  E-value=9.1e-15  Score=145.75  Aligned_cols=126  Identities=18%  Similarity=0.150  Sum_probs=108.3

Q ss_pred             CceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC--hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEE
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL  491 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s--k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hL  491 (552)
                      +.|.+.+.||+|+||.||+|.+..+++.||||+++..  ......+.+|+.++.++..|     +||+++++++.....+
T Consensus        15 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~-----~~i~~~~~~~~~~~~~   89 (296)
T cd06618          15 NDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDC-----PYIVKCYGYFITDSDV   89 (296)
T ss_pred             chheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCC-----CchHhhheeeecCCeE
Confidence            5689999999999999999999988999999999754  22345567788777776633     9999999999999999


Q ss_pred             EEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHh-CCCeeeeccc
Q 008813          492 FIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFL-LLVIYFILFC  549 (552)
Q Consensus       492 yIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs-~gIIH~~L~~  549 (552)
                      |+||||+.++|..++.....     ++++..+..++.||+.||.|||+ .+|+|++|++
T Consensus        90 ~~v~e~~~~~l~~l~~~~~~-----~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p  143 (296)
T cd06618          90 FICMELMSTCLDKLLKRIQG-----PIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKP  143 (296)
T ss_pred             EEEeeccCcCHHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcH
Confidence            99999998888888776443     28999999999999999999997 6999999986

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.60  E-value=6.1e-15  Score=151.16  Aligned_cols=124  Identities=23%  Similarity=0.301  Sum_probs=107.0

Q ss_pred             ecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC---hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeC
Q 008813          412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL  488 (552)
Q Consensus       412 i~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s---k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~  488 (552)
                      +..+|.+...||+|+||.||+|.+..+++.||||++...   ......+.+|+.+++.++|      +||+++++++...
T Consensus        13 ~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h------~niv~~~~~~~~~   86 (342)
T cd07879          13 LPERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQH------ENVIGLLDVFTSA   86 (342)
T ss_pred             cccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCC------CCccchhheeccc
Confidence            457899999999999999999999999999999998753   2234567899999999998      9999999998754


Q ss_pred             ------CEEEEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          489 ------EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       489 ------~hLyIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                            .++|+|||++..+|..++..        .+++..++.++.||+.||.|||+++|+|++|++
T Consensus        87 ~~~~~~~~~~lv~e~~~~~l~~~~~~--------~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp  145 (342)
T cd07879          87 VSGDEFQDFYLVMPYMQTDLQKIMGH--------PLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKP  145 (342)
T ss_pred             ccCCCCceEEEEecccccCHHHHHcC--------CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCH
Confidence                  35799999998888776421        189999999999999999999999999999985

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.60  E-value=9.9e-15  Score=142.40  Aligned_cols=129  Identities=16%  Similarity=0.133  Sum_probs=103.7

Q ss_pred             eEEEEEeccCCceEEEEEEEC---CCCcEEEEEEEecC---hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCC
Q 008813          416 YYVTEYLGSAAFSKVFQAQDL---HTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE  489 (552)
Q Consensus       416 Y~Ile~LGkG~FG~VykA~Dk---ktg~~VAVKIIk~s---k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~  489 (552)
                      |.+.+.||+|+||.||+|.+.   .+++.||||++...   ....+.+.+|+++++.++|      |||+++++++....
T Consensus         1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h------~~i~~~~~~~~~~~   74 (273)
T cd05074           1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDH------PNVIKLIGVSLRSR   74 (273)
T ss_pred             CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCC------CCcceEEEEEccCC
Confidence            567789999999999999865   35789999999764   2334678899999999998      99999999886542


Q ss_pred             ------EEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          490 ------HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       490 ------hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                            ..++++||+.+ +|..++...........+++..++.++.||+.||.|||+++|+|++|++-
T Consensus        75 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~  142 (273)
T cd05074          75 AKGRLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAAR  142 (273)
T ss_pred             CCCcccceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchh
Confidence                  24788999876 89888754322111223789999999999999999999999999999964

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=99.60  E-value=1.4e-16  Score=163.09  Aligned_cols=123  Identities=16%  Similarity=0.265  Sum_probs=112.4

Q ss_pred             ceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEEEEE
Q 008813          415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIV  494 (552)
Q Consensus       415 RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hLyIV  494 (552)
                      -|.++.+||+|+||.||+|.++.+|..+|||.+....+ ++.+..||.|+++...      ++||++|+.+.....+|||
T Consensus        34 VFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~sD-LQEIIKEISIMQQC~S------~yVVKYYGSYFK~sDLWIV  106 (502)
T KOG0574|consen   34 VFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVDTD-LQEIIKEISIMQQCKS------KYVVKYYGSYFKHSDLWIV  106 (502)
T ss_pred             HHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCccch-HHHHHHHHHHHHHcCC------chhhhhhhhhccCCceEee
Confidence            36677899999999999999999999999999987654 5778999999999998      9999999999988899999


Q ss_pred             EecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          495 CELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       495 mEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ||||+. ++.++++.++.     +|++.+|..+++..+.||+|||..+-||+|+|+
T Consensus       107 MEYCGAGSiSDI~R~R~K-----~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKA  157 (502)
T KOG0574|consen  107 MEYCGAGSISDIMRARRK-----PLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKA  157 (502)
T ss_pred             hhhcCCCcHHHHHHHhcC-----CccHHHHHHHHHHHHhHHHHHHHHHHHHhhccc
Confidence            999996 99999986653     499999999999999999999999999999997

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.60  E-value=6.8e-15  Score=147.28  Aligned_cols=115  Identities=19%  Similarity=0.097  Sum_probs=99.1

Q ss_pred             CceEEEEEEECCCCcEEEEEEEecC---hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEEEEEEecCCC-C
Q 008813          426 AFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCELLRA-N  501 (552)
Q Consensus       426 ~FG~VykA~Dkktg~~VAVKIIk~s---k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hLyIVmEll~G-s  501 (552)
                      ++|.||++++..+++.||||+++..   ......+.+|+.+++.++|      +||++++++|...+.++++|||+.+ +
T Consensus        12 ~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h------~~i~~~~~~~~~~~~~~~~~e~~~~~~   85 (314)
T cd08216          12 DLMIVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQH------PNILPYVTSFIVDSELYVVSPLMAYGS   85 (314)
T ss_pred             CCceEEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCC------cchhhhhheeecCCeEEEEEeccCCCC
Confidence            4456666777778999999999754   3345678999999999998      9999999999999999999999986 8


Q ss_pred             HHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          502 LYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       502 L~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      |.+++.......    +++..++.++.||+.||.|||+++|+|++|++-
T Consensus        86 l~~~l~~~~~~~----~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~  130 (314)
T cd08216          86 CEDLLKTHFPEG----LPELAIAFILKDVLNALDYIHSKGFIHRSVKAS  130 (314)
T ss_pred             HHHHHHHhcccC----CCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcc
Confidence            999998654332    899999999999999999999999999999863

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.60  E-value=1e-14  Score=146.43  Aligned_cols=118  Identities=15%  Similarity=0.195  Sum_probs=104.9

Q ss_pred             EEEeccCCceEEEEEEECCCCcEEEEEEEecCh-hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEEEEEEec
Q 008813          419 TEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK-DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCEL  497 (552)
Q Consensus       419 le~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk-~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hLyIVmEl  497 (552)
                      ..+||+|+||.||++....+++.||||++.... .....+.+|+.+++.++|      +||+++++.+...++.|+||||
T Consensus        25 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h------~~iv~~~~~~~~~~~~~lv~e~   98 (292)
T cd06657          25 FIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQH------ENVVEMYNSYLVGDELWVVMEF   98 (292)
T ss_pred             HHHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCC------cchhheeeEEEeCCEEEEEEec
Confidence            368999999999999999999999999986532 234568899999999998      9999999999999999999999


Q ss_pred             CCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          498 LRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       498 l~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      +.+ +|.+++....       +++..++.++.|++.||.|||++||+|.+|++
T Consensus        99 ~~~~~L~~~~~~~~-------~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p  144 (292)
T cd06657          99 LEGGALTDIVTHTR-------MNEEQIAAVCLAVLKALSVLHAQGVIHRDIKS  144 (292)
T ss_pred             CCCCcHHHHHhcCC-------CCHHHHHHHHHHHHHHHHHHHHCCeecCCCCH
Confidence            987 8988775432       78999999999999999999999999999986

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=99.60  E-value=1.1e-14  Score=142.03  Aligned_cols=126  Identities=24%  Similarity=0.278  Sum_probs=104.7

Q ss_pred             eEEEEEeccCCceEEEEEEECC-CCcEEEEEEEecC-----------hhhHHHHHHHHHHHHH-hcccCCCCCCCeeEeE
Q 008813          416 YYVTEYLGSAAFSKVFQAQDLH-TGVDVCLKIIKND-----------KDFFDQSLDEIKLLKL-VNKNDPADEHHILRLY  482 (552)
Q Consensus       416 Y~Ile~LGkG~FG~VykA~Dkk-tg~~VAVKIIk~s-----------k~~~~~~lrEIkILk~-L~hhd~~d~pnIVrL~  482 (552)
                      |++.+.||+|+||.||++.+.. +++.+|||.+...           ......+.+|+.++.+ ++|      +||++++
T Consensus         2 y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h------~~i~~~~   75 (269)
T cd08528           2 YAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRH------PNIVRYY   75 (269)
T ss_pred             chhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCC------CCeeeEE
Confidence            7888999999999999999987 6889999988632           1223456788888876 566      9999999


Q ss_pred             eEEEeCCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHh-CCCeeeeccc
Q 008813          483 DYFYHLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFL-LLVIYFILFC  549 (552)
Q Consensus       483 d~F~~~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs-~gIIH~~L~~  549 (552)
                      +++...+++|+||||+.+ +|.+++.......  ..+++..++.++.|++.||.|||+ .+|+|.+|++
T Consensus        76 ~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~  142 (269)
T cd08528          76 KTFLENDRLYIVMDLIEGAPLGEHFNSLKEKK--QRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTP  142 (269)
T ss_pred             eeEccCCeEEEEEecCCCCcHHHHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCH
Confidence            999999999999999987 8998886432211  228999999999999999999996 7899999986

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.60  E-value=8.3e-15  Score=147.03  Aligned_cols=125  Identities=17%  Similarity=0.185  Sum_probs=105.4

Q ss_pred             CceEEEEEeccCCceEEEEEEECCCCc----EEEEEEEecC--hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEe
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLHTGV----DVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH  487 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkktg~----~VAVKIIk~s--k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~  487 (552)
                      .+|++.+.||+|+||.||++.+..++.    .||+|++...  ......+.+|+.+++.++|      +||+++++++..
T Consensus         7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h------~niv~~~~~~~~   80 (303)
T cd05110           7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDH------PHLVRLLGVCLS   80 (303)
T ss_pred             hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCC------CCcccEEEEEcC
Confidence            568899999999999999999887775    4688888754  2223467889999999998      999999998875


Q ss_pred             CCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          488 LEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       488 ~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      . ..++|+||+.+ +|.+++..+..     .+++..+..++.||+.||.|||+++|||++||+-
T Consensus        81 ~-~~~~v~e~~~~g~l~~~~~~~~~-----~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~  138 (303)
T cd05110          81 P-TIQLVTQLMPHGCLLDYVHEHKD-----NIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAAR  138 (303)
T ss_pred             C-CceeeehhcCCCCHHHHHHhccc-----CCCHHHHHHHHHHHHHHHHHHhhcCeeccccccc
Confidence            4 46799999886 89999876542     2889999999999999999999999999999974

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.59  E-value=2.6e-15  Score=169.05  Aligned_cols=130  Identities=20%  Similarity=0.193  Sum_probs=111.0

Q ss_pred             cCceEEEEEeccCCceEEEEEEEC-----CCCcEEEEEEEecCh--hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEE
Q 008813          413 AGRYYVTEYLGSAAFSKVFQAQDL-----HTGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYF  485 (552)
Q Consensus       413 ~~RY~Ile~LGkG~FG~VykA~Dk-----ktg~~VAVKIIk~sk--~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F  485 (552)
                      ....+..+.||+|+||+||+|+-.     +....||||.++...  ..+..+.||+++|..|+|      +|||+|++.+
T Consensus       485 r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H------~nIVrLlGVC  558 (774)
T KOG1026|consen  485 RSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQH------PNIVRLLGVC  558 (774)
T ss_pred             hhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccC------CCeEEEEEEE
Confidence            345677889999999999999854     234679999998753  356789999999999999      9999999999


Q ss_pred             EeCCEEEEEEecCCC-CHHHHHHhhccCCC--------CcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecc
Q 008813          486 YHLEHLFIVCELLRA-NLYEFQKFNQESGG--------EAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILF  548 (552)
Q Consensus       486 ~~~~hLyIVmEll~G-sL~d~Lk~~~~~g~--------~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~  548 (552)
                      ...+.+|+|+|||.. ||.+||+.+.....        ..+|+..+.+.|+.||+.||+||-++.+||+||-
T Consensus       559 ~~~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLA  630 (774)
T KOG1026|consen  559 REGDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLA  630 (774)
T ss_pred             ccCCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchh
Confidence            999999999999986 99999985532211        2348999999999999999999999999999994

>PHA02988 hypothetical protein; Provisional

Probab=99.59  E-value=1.7e-14  Score=144.39  Aligned_cols=117  Identities=15%  Similarity=0.190  Sum_probs=101.5

Q ss_pred             EEeccCCceEEEEEEECCCCcEEEEEEEecCh----hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEe----CCEE
Q 008813          420 EYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH----LEHL  491 (552)
Q Consensus       420 e~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk----~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~----~~hL  491 (552)
                      ..||+|++|.||+|.+  +++.||||+++...    ...+.+.+|+.+|++++|      |||+++++++..    ...+
T Consensus        26 ~~i~~g~~~~v~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h------~nIv~~~g~~~~~~~~~~~~   97 (283)
T PHA02988         26 VLIKENDQNSIYKGIF--NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDS------NNILKIYGFIIDIVDDLPRL   97 (283)
T ss_pred             eEEeeCCceEEEEEEE--CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCC------CCEEEEeeeEEecccCCCce
Confidence            3689999999999987  68899999997642    234667799999999998      999999999977    4579


Q ss_pred             EEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHh-CCCeeeecccc
Q 008813          492 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFL-LLVIYFILFCF  550 (552)
Q Consensus       492 yIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs-~gIIH~~L~~~  550 (552)
                      +|||||+.+ +|.++++..+.      +++.....++.|++.||.|||+ .+++|++||+-
T Consensus        98 ~lv~Ey~~~g~L~~~l~~~~~------~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~  152 (283)
T PHA02988         98 SLILEYCTRGYLREVLDKEKD------LSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSV  152 (283)
T ss_pred             EEEEEeCCCCcHHHHHhhCCC------CChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChh
Confidence            999999987 89999986543      8899999999999999999998 59999999974

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=99.59  E-value=8.9e-15  Score=144.41  Aligned_cols=130  Identities=16%  Similarity=0.136  Sum_probs=106.0

Q ss_pred             ceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC--hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEEE
Q 008813          415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLF  492 (552)
Q Consensus       415 RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s--k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hLy  492 (552)
                      .|...+.||+|+||.||++.+..+++.||||.+...  ......+.+|+.++.++..|     +||+++++++...+..+
T Consensus         5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~-----~~iv~~~~~~~~~~~~~   79 (288)
T cd06616           5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDC-----PYIVKFYGALFREGDCW   79 (288)
T ss_pred             HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCC-----CCEeeeeeEEecCCcEE
Confidence            456678899999999999999999999999998753  23345678999999999733     99999999999999999


Q ss_pred             EEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHh-CCCeeeecccc
Q 008813          493 IVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFL-LLVIYFILFCF  550 (552)
Q Consensus       493 IVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs-~gIIH~~L~~~  550 (552)
                      ++|||+..+|.++....... ....+++..+..++.|++.||+|||+ .+|+|++|++-
T Consensus        80 ~~~e~~~~~l~~l~~~~~~~-~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~  137 (288)
T cd06616          80 ICMELMDISLDKFYKYVYEV-LKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPS  137 (288)
T ss_pred             EEEecccCCHHHHHHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHH
Confidence            99999998766654321100 00238999999999999999999997 49999999863

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]

Probab=99.59  E-value=9.2e-16  Score=157.68  Aligned_cols=130  Identities=17%  Similarity=0.212  Sum_probs=112.3

Q ss_pred             CceEEEEEeccCCceEEEEEEECCCC----cEEEEEEEecCh---hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEE
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLHTG----VDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFY  486 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkktg----~~VAVKIIk~sk---~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~  486 (552)
                      ..|+++.+||+|.||.||+|..+.+.    +.+|||.++..+   .....+.|||.+++.|+|      +|||.|...|.
T Consensus        24 ~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h------~nvi~Lv~Vfl   97 (438)
T KOG0666|consen   24 FEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKH------PNVISLVKVFL   97 (438)
T ss_pred             HHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcC------CcchhHHHHHh
Confidence            45899999999999999999655432    378999998653   345789999999999999      99999999998


Q ss_pred             e-CCEEEEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          487 H-LEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       487 ~-~~hLyIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      . ...+++++||.+.+|+++|+.++.... .-++...++.|+.||+.|+.|||++-|+|+|||+-
T Consensus        98 ~~d~~v~l~fdYAEhDL~~II~fHr~~~~-~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPa  161 (438)
T KOG0666|consen   98 SHDKKVWLLFDYAEHDLWHIIKFHRASKA-KQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPA  161 (438)
T ss_pred             ccCceEEEEehhhhhhHHHHHHHhccchh-ccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcc
Confidence            6 789999999999999999997654433 34899999999999999999999999999999973

>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]

Probab=99.58  E-value=1.1e-15  Score=154.89  Aligned_cols=125  Identities=19%  Similarity=0.228  Sum_probs=113.3

Q ss_pred             CceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC---------hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeE
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---------KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDY  484 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s---------k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~  484 (552)
                      ..|.-.+.||.|..+.|.+|..+.++..+|+|+|...         ...++....|+.||+++..|     |+||.|.|.
T Consensus        17 ~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GH-----P~II~l~D~   91 (411)
T KOG0599|consen   17 AKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGH-----PYIIDLQDV   91 (411)
T ss_pred             hhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCC-----CcEEEeeee
Confidence            3577778999999999999999999999999999642         33567788999999999876     999999999


Q ss_pred             EEeCCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          485 FYHLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       485 F~~~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      |.....+++|+|+|.. .|+++|...-.      +++++.+.|++|+++|+.|||.++|||+|||+
T Consensus        92 yes~sF~FlVFdl~prGELFDyLts~Vt------lSEK~tR~iMrqlfegVeylHa~~IVHRDLKp  151 (411)
T KOG0599|consen   92 YESDAFVFLVFDLMPRGELFDYLTSKVT------LSEKETRRIMRQLFEGVEYLHARNIVHRDLKP  151 (411)
T ss_pred             ccCcchhhhhhhhcccchHHHHhhhhee------ecHHHHHHHHHHHHHHHHHHHHhhhhhcccCh
Confidence            9999999999999976 99999998765      99999999999999999999999999999996

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=99.58  E-value=1.5e-15  Score=175.58  Aligned_cols=127  Identities=20%  Similarity=0.185  Sum_probs=105.8

Q ss_pred             cCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC--hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEE----
Q 008813          413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFY----  486 (552)
Q Consensus       413 ~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s--k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~----  486 (552)
                      ...|+.++.||+||||.||+++++-+|+.||||.|+..  ......+.+|+++|.+|+|      ||||++|..|.    
T Consensus       478 ~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnH------pNVVRYysAWVEs~~  551 (1351)
T KOG1035|consen  478 LNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNH------PNVVRYYSAWVESTA  551 (1351)
T ss_pred             hhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCC------cceeeeehhhhccCC
Confidence            34567889999999999999999999999999999876  4445678999999999999      99999997740    


Q ss_pred             -------------------------------------------------------e-----------------------C
Q 008813          487 -------------------------------------------------------H-----------------------L  488 (552)
Q Consensus       487 -------------------------------------------------------~-----------------------~  488 (552)
                                                                             .                       .
T Consensus       552 ~~~~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S  631 (1351)
T KOG1035|consen  552 ELTVLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLS  631 (1351)
T ss_pred             ccccccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccc
Confidence                                                                   0                       0


Q ss_pred             -------------------------------------CEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHH
Q 008813          489 -------------------------------------EHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFL  530 (552)
Q Consensus       489 -------------------------------------~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QI  530 (552)
                                                           -.+||.||||.. .|.++++++...     -....++.+++||
T Consensus       632 ~tS~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~-----~~~d~~wrLFreI  706 (1351)
T KOG1035|consen  632 NTSDSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFN-----SQRDEAWRLFREI  706 (1351)
T ss_pred             cccccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccc-----hhhHHHHHHHHHH
Confidence                                                 127999999999 566666665531     0467899999999


Q ss_pred             HHHHHHHHhCCCeeeecccc
Q 008813          531 LTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       531 L~AL~YLHs~gIIH~~L~~~  550 (552)
                      ++||.|||++||||+|||+-
T Consensus       707 lEGLaYIH~~giIHRDLKP~  726 (1351)
T KOG1035|consen  707 LEGLAYIHDQGIIHRDLKPR  726 (1351)
T ss_pred             HHHHHHHHhCceeeccCCcc
Confidence            99999999999999999974

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.58  E-value=2.4e-16  Score=172.46  Aligned_cols=126  Identities=21%  Similarity=0.264  Sum_probs=110.6

Q ss_pred             cCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC-hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEE
Q 008813          413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND-KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL  491 (552)
Q Consensus       413 ~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s-k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hL  491 (552)
                      .+-|.|+..||.|+||+||+|..+.++-..|-|+|... ...++.++.||.||..+.|      |+||+|++.|+..+.+
T Consensus        31 ~d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdH------P~ivkLl~ayy~enkL  104 (1187)
T KOG0579|consen   31 RDHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDH------PVIVKLLSAYYFENKL  104 (1187)
T ss_pred             HHHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCC------hHHHHHHHHHhccCce
Confidence            35588889999999999999999999888899998754 4456788999999999998      9999999999999999


Q ss_pred             EEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          492 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       492 yIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ||+.|||+| -...++-.-.+     +|++.+|+.+++|++.||.|||+++|||+|||+
T Consensus       105 wiliEFC~GGAVDaimlEL~r-----~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKA  158 (1187)
T KOG0579|consen  105 WILIEFCGGGAVDAIMLELGR-----VLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKA  158 (1187)
T ss_pred             EEEEeecCCchHhHHHHHhcc-----ccchHHHHHHHHHHHHHHHHHhhcchhhhhccc
Confidence            999999998 44444444332     399999999999999999999999999999997

>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.58  E-value=9.1e-15  Score=146.39  Aligned_cols=130  Identities=18%  Similarity=0.298  Sum_probs=117.5

Q ss_pred             eecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCE
Q 008813          411 VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH  490 (552)
Q Consensus       411 vi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~h  490 (552)
                      ++.++|.++++||.|+||.+|+|.....|+.||||+-.+... ..++..|.++.+.|.+.     .+|+.+..++....+
T Consensus        12 iv~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~-hpqL~yEskvY~iL~~g-----~GiP~i~~y~~e~~y   85 (341)
T KOG1163|consen   12 IVGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAK-HPQLLYESKVYRILQGG-----VGIPHIRHYGTEKDY   85 (341)
T ss_pred             eeccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCC-CcchhHHHHHHHHhccC-----CCCchhhhhcccccc
Confidence            456889999999999999999999999999999998876533 35788999999999986     899999999999999


Q ss_pred             EEEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccccC
Q 008813          491 LFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCFS  551 (552)
Q Consensus       491 LyIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~~  551 (552)
                      -.+||++++.+|.+++..+.++     |+.+.++.++-|++.-++|+|.+++||+|+|+=-
T Consensus        86 nvlVMdLLGPsLEdLfnfC~R~-----ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdN  141 (341)
T KOG1163|consen   86 NVLVMDLLGPSLEDLFNFCSRR-----FTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDN  141 (341)
T ss_pred             ceeeeeccCccHHHHHHHHhhh-----hhHHhHHHHHHHHHHHHHHHHhhccccccCCccc
Confidence            9999999999999998877654     9999999999999999999999999999999743

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=99.58  E-value=3.9e-16  Score=179.28  Aligned_cols=126  Identities=13%  Similarity=0.096  Sum_probs=112.3

Q ss_pred             ecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChh----hHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEe
Q 008813          412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD----FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH  487 (552)
Q Consensus       412 i~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~----~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~  487 (552)
                      -.+.|.++++||+|+||.|.+++.+.+++.||+|++.+...    ....+..|-.||..-+.      +.||+|..+|.+
T Consensus        73 ~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns------~Wiv~LhyAFQD  146 (1317)
T KOG0612|consen   73 KAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNS------EWIVQLHYAFQD  146 (1317)
T ss_pred             CHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCc------HHHHHHHHHhcC
Confidence            34679999999999999999999999999999999987422    23456678888877665      899999999999


Q ss_pred             CCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          488 LEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       488 ~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      .+++|+||||+.| +|..++.....      +++..+++|+..|+.||.-||++|+||+|+|+
T Consensus       147 ~~~LYlVMdY~pGGDlltLlSk~~~------~pE~~ArFY~aEiVlAldslH~mgyVHRDiKP  203 (1317)
T KOG0612|consen  147 ERYLYLVMDYMPGGDLLTLLSKFDR------LPEDWARFYTAEIVLALDSLHSMGYVHRDIKP  203 (1317)
T ss_pred             ccceEEEEecccCchHHHHHhhcCC------ChHHHHHHHHHHHHHHHHHHHhccceeccCCc
Confidence            9999999999876 99999987763      99999999999999999999999999999997

>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.57  E-value=1.6e-14  Score=148.74  Aligned_cols=131  Identities=21%  Similarity=0.163  Sum_probs=111.4

Q ss_pred             ceEEEEEeccCCceEEEEEEECCCC-cEEEEEEEecChhh-HHHHHHHHHHHHHhcccCCCCCCCeeEeEeEE-EeCCEE
Q 008813          415 RYYVTEYLGSAAFSKVFQAQDLHTG-VDVCLKIIKNDKDF-FDQSLDEIKLLKLVNKNDPADEHHILRLYDYF-YHLEHL  491 (552)
Q Consensus       415 RY~Ile~LGkG~FG~VykA~Dkktg-~~VAVKIIk~sk~~-~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F-~~~~hL  491 (552)
                      +|.+.++||+|+||.||++.+..++ ..+|+|+....... ...+..|+.++..+..  ....+++..+++.+ ....+-
T Consensus        19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~--~~~~~~~~~~~~~G~~~~~~~   96 (322)
T KOG1164|consen   19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEK--KNGPSHFPKLLDHGRSTEDFN   96 (322)
T ss_pred             ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhh--hcCCCCCCEEEEeccCCCcee
Confidence            8999999999999999999998774 68999998864221 2268899999999984  22236999999999 477899


Q ss_pred             EEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccccC
Q 008813          492 FIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCFS  551 (552)
Q Consensus       492 yIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~~  551 (552)
                      ||||++++.+|.++.+......    |+...+..|+.|++.+|++||+.|+||+|||+--
T Consensus        97 ~iVM~l~G~sL~dl~~~~~~~~----fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N  152 (322)
T KOG1164|consen   97 FIVMSLLGPSLEDLRKRNPPGR----FSRKTVLRIAIQNLNALEDLHSKGFIHRDIKPEN  152 (322)
T ss_pred             EEEEeccCccHHHHHHhCCCCC----cCHhHHHHHHHHHHHHHHHHHhcCcccCCcCHHH
Confidence            9999999999999887665322    9999999999999999999999999999999743

>PRK09188 serine/threonine protein kinase; Provisional

Probab=99.57  E-value=1.6e-14  Score=152.90  Aligned_cols=119  Identities=14%  Similarity=-0.027  Sum_probs=94.0

Q ss_pred             CceecCceEEEEEeccCCceEEEEEEECC-CCcEEEEEEEecC------hhhHHHHHHHHHHHHHhcccCCCCCCCee-E
Q 008813          409 NTVIAGRYYVTEYLGSAAFSKVFQAQDLH-TGVDVCLKIIKND------KDFFDQSLDEIKLLKLVNKNDPADEHHIL-R  480 (552)
Q Consensus       409 gdvi~~RY~Ile~LGkG~FG~VykA~Dkk-tg~~VAVKIIk~s------k~~~~~~lrEIkILk~L~hhd~~d~pnIV-r  480 (552)
                      ...+.++|.+.+.||+|+||+||+|+++. +++.||||++...      ......+.+|+++|+.|+|      +||+ .
T Consensus        13 ~~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h------~~iv~~   86 (365)
T PRK09188         13 IPALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRG------IGVVPQ   86 (365)
T ss_pred             cccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccC------CCCCcE
Confidence            34677899999999999999999999876 6778899987532      2234568899999999998      7887 4


Q ss_pred             eEeEEEeCCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeec-ccc
Q 008813          481 LYDYFYHLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFIL-FCF  550 (552)
Q Consensus       481 L~d~F~~~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L-~~~  550 (552)
                      +++.    +..||||||+.| +|.. +.  .       ..   ...++.|++.||.|||++||||+|| |+-
T Consensus        87 l~~~----~~~~LVmE~~~G~~L~~-~~--~-------~~---~~~~~~~i~~aL~~lH~~gIiHrDL~KP~  141 (365)
T PRK09188         87 LLAT----GKDGLVRGWTEGVPLHL-AR--P-------HG---DPAWFRSAHRALRDLHRAGITHNDLAKPQ  141 (365)
T ss_pred             EEEc----CCcEEEEEccCCCCHHH-hC--c-------cc---hHHHHHHHHHHHHHHHHCCCeeCCCCCcc
Confidence            5542    468999999988 7752 21  1       11   1467899999999999999999999 863

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=99.57  E-value=2.2e-14  Score=139.09  Aligned_cols=120  Identities=13%  Similarity=0.116  Sum_probs=99.1

Q ss_pred             EEeccCCceEEEEEEECC---CCcEEEEEEEecC--hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEE-eCCEEEE
Q 008813          420 EYLGSAAFSKVFQAQDLH---TGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFY-HLEHLFI  493 (552)
Q Consensus       420 e~LGkG~FG~VykA~Dkk---tg~~VAVKIIk~s--k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~-~~~hLyI  493 (552)
                      +.||+|+||.||+|.+..   ....||||.+...  ....+.+.+|+.+++.++|      |||+++++++. ..+..++
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h------~~iv~~~~~~~~~~~~~~l   74 (262)
T cd05058           1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSH------PNVLSLLGICLPSEGSPLV   74 (262)
T ss_pred             CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCC------CCcceEEEEeecCCCCcEE
Confidence            368999999999998653   3467999988542  2345677899999999998      99999999765 4556899


Q ss_pred             EEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          494 VCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       494 VmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      ||||+.+ +|.+++......     +++..+..++.||+.||.|||+++|+|++|++-
T Consensus        75 v~e~~~~~~L~~~~~~~~~~-----~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~  127 (262)
T cd05058          75 VLPYMKHGDLRNFIRSETHN-----PTVKDLIGFGLQVAKGMEYLASKKFVHRDLAAR  127 (262)
T ss_pred             EEecCCCCCHHHHHHhcCCC-----CCHHHHHHHHHHHHHHHHHHHhCCccccccCcc
Confidence            9999876 999999865432     677888999999999999999999999999974

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>PHA02882 putative serine/threonine kinase; Provisional

Probab=99.57  E-value=3.2e-14  Score=142.65  Aligned_cols=134  Identities=19%  Similarity=0.127  Sum_probs=98.1

Q ss_pred             eeCceecCceEEEEEeccCCceEEEEEEECCC---CcEEEEEEEecChhh--HHH-------HHHHHHHHHHhcccCCCC
Q 008813          407 ILNTVIAGRYYVTEYLGSAAFSKVFQAQDLHT---GVDVCLKIIKNDKDF--FDQ-------SLDEIKLLKLVNKNDPAD  474 (552)
Q Consensus       407 ~~gdvi~~RY~Ile~LGkG~FG~VykA~Dkkt---g~~VAVKIIk~sk~~--~~~-------~lrEIkILk~L~hhd~~d  474 (552)
                      .+.++..++|++.+.||+|+||.||+|.+..+   +..+|+|+.......  .+.       ...++..+..+.   ..+
T Consensus         5 ~~~~i~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~---~~~   81 (294)
T PHA02882          5 PLIDITGKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIH---NID   81 (294)
T ss_pred             eeeccCCCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhc---cCC
Confidence            34456778999999999999999999998877   667888875432211  000       011222222221   123


Q ss_pred             CCCeeEeEeEEEeCC----EEEEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          475 EHHILRLYDYFYHLE----HLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       475 ~pnIVrL~d~F~~~~----hLyIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      +++|+++++++....    ..+++||++..++.++++....      +++..++.|+.||+.||.|||+++|||+|||+
T Consensus        82 h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp  154 (294)
T PHA02882         82 HLGIPKYYGCGSFKRCRMYYRFILLEKLVENTKEIFKRIKC------KNKKLIKNIMKDMLTTLEYIHEHGISHGDIKP  154 (294)
T ss_pred             CCCCCcEEEeeeEecCCceEEEEEEehhccCHHHHHHhhcc------CCHHHHHHHHHHHHHHHHHHHhCCeecCCCCH
Confidence            399999999876553    5688999988888887765432      67888999999999999999999999999996

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=99.56  E-value=2.8e-14  Score=161.06  Aligned_cols=129  Identities=18%  Similarity=0.229  Sum_probs=116.1

Q ss_pred             ecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeC---
Q 008813          412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL---  488 (552)
Q Consensus       412 i~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~---  488 (552)
                      ..+-|++.+.||+|.+|+||+++.+++++.+|+||.......-+.+..|.+||+.+.+|     ||++.+|++|...   
T Consensus        17 p~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~deEiE~eynil~~~~~h-----pnv~~fyg~~~k~~~~   91 (953)
T KOG0587|consen   17 PADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDEEEEIELEYNMLKKYSHH-----PNVATFYGAFIKKDPG   91 (953)
T ss_pred             CCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCccccHHHHHHHHHHHhccCC-----CCcceEEEEEEEecCC
Confidence            34679999999999999999999999999999999988766667888999999999987     9999999999844   


Q ss_pred             --CEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          489 --EHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       489 --~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                        +.+|||||||++ +..++++......    +.|..|..|++.++.||.+||.+.+||+|+|-
T Consensus        92 ~~DqLWLVMEfC~gGSVTDLVKn~~g~r----l~E~~IaYI~re~lrgl~HLH~nkviHRDikG  151 (953)
T KOG0587|consen   92 NGDQLWLVMEFCGGGSVTDLVKNTKGNR----LKEEWIAYILREILRGLAHLHNNKVIHRDIKG  151 (953)
T ss_pred             CCCeEEEEeeccCCccHHHHHhhhcccc----hhhHHHHHHHHHHHHHHHHHhhcceeeecccC
Confidence              579999999987 9999999776332    89999999999999999999999999999974

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.55  E-value=2.8e-14  Score=138.27  Aligned_cols=109  Identities=13%  Similarity=0.067  Sum_probs=94.3

Q ss_pred             CCceEEEEEEECCCCcEEEEEEEecChhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEEEEEEecCCC-CHH
Q 008813          425 AAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCELLRA-NLY  503 (552)
Q Consensus       425 G~FG~VykA~Dkktg~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hLyIVmEll~G-sL~  503 (552)
                      |.||.||++++..+++.||+|+++....    ..+|...+....|      |||+++++++...++.||||||+.+ +|.
T Consensus         4 g~~~~v~~~~~~~~~~~~~~K~i~~~~~----~~~~~~~~~~~~~------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   73 (237)
T cd05576           4 GVIDKVLLVMDTRTQQTFILKGLRKSSE----YSRERLTIIPHCV------PNMVCLHKYIVSEDSVFLVLQHAEGGKLW   73 (237)
T ss_pred             cccceEEEEEEccCCcEEEEEeecchhh----hhhHHHHHHhcCC------CceeehhhheecCCeEEEEEecCCCCCHH
Confidence            8899999999999999999999986432    2344444445555      9999999999999999999999987 999


Q ss_pred             HHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          504 EFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       504 d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      +++.....      +++..+..++.|++.||.|||+++|+|++||+
T Consensus        74 ~~l~~~~~------l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp  113 (237)
T cd05576          74 SHISKFLN------IPEECVKRWAAEMVVALDALHREGIVCRDLNP  113 (237)
T ss_pred             HHHHHhcC------CCHHHHHHHHHHHHHHHHHHHhCCeeccCCCH
Confidence            99876543      89999999999999999999999999999986

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]

Probab=99.55  E-value=3.3e-15  Score=152.97  Aligned_cols=123  Identities=18%  Similarity=0.201  Sum_probs=107.8

Q ss_pred             CceEEE-EEeccCCceEEEEEEECCCCcEEEEEEEecChhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEe----C
Q 008813          414 GRYYVT-EYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH----L  488 (552)
Q Consensus       414 ~RY~Il-e~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~----~  488 (552)
                      +.|.+- ++||-|--|+|..|.++.|++.+|+|++...    ..+.+|++++-..+.|     +|||++++.|..    .
T Consensus        61 edY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds----~KARrEVeLHw~~s~h-----~~iV~IidVyeNs~~~r  131 (400)
T KOG0604|consen   61 EDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS----PKARREVELHWMASGH-----PHIVSIIDVYENSYQGR  131 (400)
T ss_pred             hhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC----HHHHhHhhhhhhhcCC-----CceEEeehhhhhhccCc
Confidence            445553 5799999999999999999999999999754    4578999998887765     999999999863    3


Q ss_pred             CEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          489 EHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       489 ~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ..+.||||.|.| .|+..|+.++..    +|+|+++..|++||..|++|||+++|.|+|||+
T Consensus       132 kcLLiVmE~meGGeLfsriq~~g~~----afTErea~eI~~qI~~Av~~lH~~nIAHRDlKp  189 (400)
T KOG0604|consen  132 KCLLIVMECMEGGELFSRIQDRGDQ----AFTEREASEIMKQIGLAVRYLHSMNIAHRDLKP  189 (400)
T ss_pred             eeeEeeeecccchHHHHHHHHcccc----cchHHHHHHHHHHHHHHHHHHHhcchhhccCCh
Confidence            679999999988 999999987654    399999999999999999999999999999996

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.55  E-value=1.9e-15  Score=164.69  Aligned_cols=125  Identities=12%  Similarity=0.150  Sum_probs=108.7

Q ss_pred             CceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChh----hHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCC
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD----FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE  489 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~----~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~  489 (552)
                      ..|.-++.||.|+||.||-|+|..+.+.||||.+.-+..    .-..++.|++.|++|+|      ||+|.+.+||....
T Consensus        26 klf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~H------PntieYkgCyLre~   99 (948)
T KOG0577|consen   26 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRH------PNTIEYKGCYLREH   99 (948)
T ss_pred             HHHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccC------CCcccccceeeccc
Confidence            456777899999999999999999999999999875421    12458899999999999      99999999999888


Q ss_pred             EEEEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          490 HLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       490 hLyIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ..|||||||-|+-.+++.-.+.     |+.+-+|..|+.+.+.||.|||+++.||+|+|+
T Consensus       100 TaWLVMEYClGSAsDlleVhkK-----plqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKA  154 (948)
T KOG0577|consen  100 TAWLVMEYCLGSASDLLEVHKK-----PLQEVEIAAITHGALQGLAYLHSHNRIHRDIKA  154 (948)
T ss_pred             hHHHHHHHHhccHHHHHHHHhc-----cchHHHHHHHHHHHHHHHHHHHHhhHHhhhccc
Confidence            8999999999966666554432     389999999999999999999999999999997

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=99.54  E-value=1.4e-14  Score=157.98  Aligned_cols=157  Identities=18%  Similarity=0.190  Sum_probs=122.7

Q ss_pred             hhhhhccccccccCCCc---cCCCCCcceeeCceecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC--hhhHH
Q 008813          381 ECEIFHLRIIHRKNRTG---FEENKDLPIILNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND--KDFFD  455 (552)
Q Consensus       381 e~EIf~lriI~~k~~~g---fde~~~y~v~~gdvi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s--k~~~~  455 (552)
                      +-++..++-++..+...   +.....+.....+....+..++++||+|-||.|.+|.-. .+..||+|+++..  +..+.
T Consensus       502 ~a~iv~~Q~vs~~Nss~v~y~~~~~~k~~al~EfPRs~L~~~ekiGeGqFGEVhLCeve-g~lkVAVK~Lr~~a~~~~r~  580 (807)
T KOG1094|consen  502 EADIVTLQGVSGGNSSAVPYLPPGVGKGPALVEFPRSRLRFKEKIGEGQFGEVHLCEVE-GPLKVAVKILRPDATKNARN  580 (807)
T ss_pred             ccccccccCCCCCccccccccCcccccCcchhhcchhheehhhhhcCcccceeEEEEec-CceEEEEeecCcccchhHHH
Confidence            44566666665444321   112222333444556688899999999999999999764 3688999999864  34457


Q ss_pred             HHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHH
Q 008813          456 QSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLL  534 (552)
Q Consensus       456 ~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL  534 (552)
                      .+.+||++|.+|+|      ||||+|++++..++.+|||||||.. +|.+|+..+....    +.......|+.||+.||
T Consensus       581 ~F~kEIkiLsqLkh------PNIveLvGVC~~DePicmI~EYmEnGDLnqFl~aheapt----~~t~~~vsi~tqiasgm  650 (807)
T KOG1094|consen  581 DFLKEIKILSRLKH------PNIVELLGVCVQDDPLCMITEYMENGDLNQFLSAHELPT----AETAPGVSICTQIASGM  650 (807)
T ss_pred             HHHHHHHHHhccCC------CCeeEEEeeeecCCchHHHHHHHhcCcHHHHHHhccCcc----cccchhHHHHHHHHHHH
Confidence            89999999999998      9999999999999999999999986 9999999875321    34445566999999999


Q ss_pred             HHHHhCCCeeeecc
Q 008813          535 MLIFLLLVIYFILF  548 (552)
Q Consensus       535 ~YLHs~gIIH~~L~  548 (552)
                      +||.+.++||+||-
T Consensus       651 aYLes~nfVHrd~a  664 (807)
T KOG1094|consen  651 AYLESLNFVHRDLA  664 (807)
T ss_pred             HHHHhhchhhcccc
Confidence            99999999999985

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=99.54  E-value=3.6e-14  Score=136.60  Aligned_cols=117  Identities=11%  Similarity=0.033  Sum_probs=86.9

Q ss_pred             EEEeccCCceEEEEEEECCCCcEEEEEEEecChh---h------------------------HHHHHHHHHHHHHhcccC
Q 008813          419 TEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD---F------------------------FDQSLDEIKLLKLVNKND  471 (552)
Q Consensus       419 le~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~---~------------------------~~~~lrEIkILk~L~hhd  471 (552)
                      ...||+|+||+||+|.+. +|+.||||+++....   .                        .....+|+++|..|.+  
T Consensus         2 ~~~ig~G~~~~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~--   78 (190)
T cd05147           2 NGCISTGKEANVYHATTA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVT--   78 (190)
T ss_pred             CCccccccceEEEEEECC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHH--
Confidence            358999999999999987 899999999976411   0                        1233459999999987  


Q ss_pred             CCCCCCeeEeEeEEEeCCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHH-HhCCCeeeeccc
Q 008813          472 PADEHHILRLYDYFYHLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLI-FLLLVIYFILFC  549 (552)
Q Consensus       472 ~~d~pnIVrL~d~F~~~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YL-Hs~gIIH~~L~~  549 (552)
                          ++|...... .... .+|||||+++ +|...+....      ++++..+..++.|++.+|.+| |+.||||+|||+
T Consensus        79 ----~~v~~p~~~-~~~~-~~iVmE~i~g~~l~~~~~~~~------~~~~~~~~~i~~qi~~~L~~l~H~~giiHrDlkP  146 (190)
T cd05147          79 ----AGIPCPEPI-LLKS-HVLVMEFIGDDGWAAPRLKDA------PLSESKARELYLQVIQIMRILYQDCRLVHADLSE  146 (190)
T ss_pred             ----CCCCCCcEE-EecC-CEEEEEEeCCCCCcchhhhcC------CCCHHHHHHHHHHHHHHHHHHHHhCCcccCCCCH
Confidence                454322222 1222 3899999998 5544322222      289999999999999999999 699999999997


Q ss_pred             c
Q 008813          550 F  550 (552)
Q Consensus       550 ~  550 (552)
                      -
T Consensus       147 ~  147 (190)
T cd05147         147 Y  147 (190)
T ss_pred             H
Confidence            3

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.53  E-value=1.3e-14  Score=159.24  Aligned_cols=136  Identities=13%  Similarity=0.149  Sum_probs=119.8

Q ss_pred             CCcceeeCceecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC----hhhHHHHHHHHHHHHHhcccCCCCCCC
Q 008813          402 KDLPIILNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND----KDFFDQSLDEIKLLKLVNKNDPADEHH  477 (552)
Q Consensus       402 ~~y~v~~gdvi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s----k~~~~~~lrEIkILk~L~hhd~~d~pn  477 (552)
                      .+..+.-..+-..-|..++.||-|+||.|.+++...|...||+|.+++.    +..+.++..|..||....+      +.
T Consensus       617 nYiRLkRaKMdKSmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn------~W  690 (1034)
T KOG0608|consen  617 NYIRLKRAKMDKSMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADN------EW  690 (1034)
T ss_pred             hHHHHHHhhccccceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCC------cc
Confidence            3444555556667789999999999999999999999999999999874    3345678889999998887      89


Q ss_pred             eeEeEeEEEeCCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          478 ILRLYDYFYHLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       478 IVrL~d~F~~~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ||+||..|.+.+.||+||+|+.| ++..+|.+.+-      |.|..+++|+.++.+|+++.|.+|+||+|||+
T Consensus       691 VVrLyySFQDkdnLYFVMdYIPGGDmMSLLIrmgI------FeE~LARFYIAEltcAiesVHkmGFIHRDiKP  757 (1034)
T KOG0608|consen  691 VVRLYYSFQDKDNLYFVMDYIPGGDMMSLLIRMGI------FEEDLARFYIAELTCAIESVHKMGFIHRDIKP  757 (1034)
T ss_pred             eEEEEEEeccCCceEEEEeccCCccHHHHHHHhcc------CHHHHHHHHHHHHHHHHHHHHhccceecccCc
Confidence            99999999999999999999987 99999988764      99999999999999999999999999999996

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=99.53  E-value=7.1e-15  Score=159.86  Aligned_cols=121  Identities=21%  Similarity=0.151  Sum_probs=105.1

Q ss_pred             CceecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeC
Q 008813          409 NTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL  488 (552)
Q Consensus       409 gdvi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~  488 (552)
                      +++..+-..-++.||.|+-|.||+++.+  ++.||||.++..      -.-+|+-|++|+|      +|||.+.+++...
T Consensus       119 WeiPFe~IsELeWlGSGaQGAVF~Grl~--netVAVKKV~el------kETdIKHLRkLkH------~NII~FkGVCtqs  184 (904)
T KOG4721|consen  119 WEIPFEEISELEWLGSGAQGAVFLGRLH--NETVAVKKVREL------KETDIKHLRKLKH------PNIITFKGVCTQS  184 (904)
T ss_pred             ccCCHHHhhhhhhhccCcccceeeeecc--CceehhHHHhhh------hhhhHHHHHhccC------cceeeEeeeecCC
Confidence            3444455566789999999999999864  678999988632      2357899999999      9999999999999


Q ss_pred             CEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          489 EHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       489 ~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ..+|||||||.. -|+++|+..+.      ++...+..|..+|+.||.|||.++|||+|||.
T Consensus       185 PcyCIiMEfCa~GqL~~VLka~~~------itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKS  240 (904)
T KOG4721|consen  185 PCYCIIMEFCAQGQLYEVLKAGRP------ITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKS  240 (904)
T ss_pred             ceeEEeeeccccccHHHHHhccCc------cCHHHHHHHHHHhhhhhHHHHHhhHhhhccCC
Confidence            999999999986 89999998654      89999999999999999999999999999995

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.53  E-value=2.8e-14  Score=165.45  Aligned_cols=118  Identities=13%  Similarity=0.151  Sum_probs=103.6

Q ss_pred             CceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEEEE
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFI  493 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hLyI  493 (552)
                      ..+.....||+|+||.||+|.++.+++.||||.++....   ....|++++++++|      ||||++++++...+..|+
T Consensus       690 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~l~~l~H------pnIv~~~~~~~~~~~~~l  760 (968)
T PLN00113        690 SSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNS---IPSSEIADMGKLQH------PNIVKLIGLCRSEKGAYL  760 (968)
T ss_pred             hhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCcc---ccHHHHHHHhhCCC------CCcceEEEEEEcCCCCEE
Confidence            456667889999999999999999999999999875432   22357889999988      999999999999999999


Q ss_pred             EEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHH---hCCCeeeeccc
Q 008813          494 VCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIF---LLLVIYFILFC  549 (552)
Q Consensus       494 VmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLH---s~gIIH~~L~~  549 (552)
                      ||||+.+ +|.++++.         +++..+..|+.||+.||+|||   +.+|||+|||+
T Consensus       761 v~Ey~~~g~L~~~l~~---------l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp  811 (968)
T PLN00113        761 IHEYIEGKNLSEVLRN---------LSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSP  811 (968)
T ss_pred             EEeCCCCCcHHHHHhc---------CCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCH
Confidence            9999986 99999863         788999999999999999999   66999999986

>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]

Probab=99.53  E-value=6.5e-15  Score=157.04  Aligned_cols=129  Identities=21%  Similarity=0.201  Sum_probs=115.3

Q ss_pred             eecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecCh----hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEE
Q 008813          411 VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFY  486 (552)
Q Consensus       411 vi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk----~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~  486 (552)
                      +-..-|.+-++||+|+||.|+-|+-+.||+-||+|.+.+.+    ..-..+++|..||++++.      +.||.|-.+|+
T Consensus       182 vt~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s------~FiVslaYAfe  255 (591)
T KOG0986|consen  182 VTKNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSS------PFIVSLAYAFE  255 (591)
T ss_pred             ccccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhcc------CcEEEEeeeec
Confidence            33456888899999999999999999999999999886542    223468899999999998      89999999999


Q ss_pred             eCCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          487 HLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       487 ~~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      +.+.+|+||.+|.| +|.-.|.+.+..+    |++.+++.|+.||+.||++||+.+||++|||+
T Consensus       256 Tkd~LClVLtlMNGGDLkfHiyn~g~~g----F~e~ra~FYAAEi~cGLehlH~~~iVYRDLKP  315 (591)
T KOG0986|consen  256 TKDALCLVLTLMNGGDLKFHIYNHGNPG----FDEQRARFYAAEIICGLEHLHRRRIVYRDLKP  315 (591)
T ss_pred             CCCceEEEEEeecCCceeEEeeccCCCC----CchHHHHHHHHHHHhhHHHHHhcceeeccCCh
Confidence            99999999999988 9988888877655    99999999999999999999999999999996

>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.52  E-value=1.7e-14  Score=157.95  Aligned_cols=126  Identities=17%  Similarity=0.202  Sum_probs=115.0

Q ss_pred             CceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEEEE
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFI  493 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hLyI  493 (552)
                      ....+..+||-|-||.||.+.+++....||||.++.+...++.++.|..+|+.|+|      ||+|+|+++|.....+||
T Consensus       267 tdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtMeveEFLkEAAvMKeikH------pNLVqLLGVCT~EpPFYI  340 (1157)
T KOG4278|consen  267 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH------PNLVQLLGVCTHEPPFYI  340 (1157)
T ss_pred             hheeeeeccCCCcccceeeeeeeccceeeehhhhhhcchhHHHHHHHHHHHHhhcC------ccHHHHhhhhccCCCeEE
Confidence            44567789999999999999999999999999999887778999999999999999      999999999999999999


Q ss_pred             EEecCC-CCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          494 VCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       494 VmEll~-GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      |+|||- |+|.++|+.+.+..    ++.-.+..++.||..||.||..+++||+||-+
T Consensus       341 iTEfM~yGNLLdYLRecnr~e----v~avvLlyMAtQIsSaMeYLEkknFIHRDLAA  393 (1157)
T KOG4278|consen  341 ITEFMCYGNLLDYLRECNRSE----VPAVVLLYMATQISSAMEYLEKKNFIHRDLAA  393 (1157)
T ss_pred             EEecccCccHHHHHHHhchhh----cchhHHHHHHHHHHHHHHHHHHhhhhhhhhhh
Confidence            999976 59999999887643    77778889999999999999999999999964

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.52  E-value=2.6e-14  Score=158.08  Aligned_cols=118  Identities=16%  Similarity=0.181  Sum_probs=106.7

Q ss_pred             EeccCCceEEEEEEECCCCcEEEEEEEecC-hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEEEEEEecCC
Q 008813          421 YLGSAAFSKVFQAQDLHTGVDVCLKIIKND-KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCELLR  499 (552)
Q Consensus       421 ~LGkG~FG~VykA~Dkktg~~VAVKIIk~s-k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hLyIVmEll~  499 (552)
                      +||+|.||+||-|+|..|....|||-|... ....+-+..||.++++|+|      .|||++++.+...+++-|.||-++
T Consensus       582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrH------kNIVrYLGs~senGf~kIFMEqVP  655 (1226)
T KOG4279|consen  582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRH------KNIVRYLGSVSENGFFKIFMEQVP  655 (1226)
T ss_pred             EeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhh------HhHHHHhhccCCCCeEEEEeecCC
Confidence            699999999999999999999999998753 4456778899999999999      899999999999999999999988


Q ss_pred             C-CHHHHHHhhccCCCCcCC--CHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          500 A-NLYEFQKFNQESGGEAYF--TLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       500 G-sL~d~Lk~~~~~g~~~pL--Se~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      | +|-.+|+.+=.     |+  .+..+-.|.+||++||.|||.+.|||+|+|-
T Consensus       656 GGSLSsLLrskWG-----PlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKG  703 (1226)
T KOG4279|consen  656 GGSLSSLLRSKWG-----PLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKG  703 (1226)
T ss_pred             CCcHHHHHHhccC-----CCccchhHHHHHHHHHHHHhhhhhhcceeeccccC
Confidence            7 99999997532     35  8899999999999999999999999999984

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.51  E-value=3.4e-13  Score=122.30  Aligned_cols=118  Identities=29%  Similarity=0.384  Sum_probs=105.8

Q ss_pred             eccCCceEEEEEEECCCCcEEEEEEEecChh--hHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEEEEEEecCC
Q 008813          422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD--FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCELLR  499 (552)
Q Consensus       422 LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~--~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hLyIVmEll~  499 (552)
                      ||.|++|.||++.+..+++.+++|++.....  ....+.+|+.+++.+.+      ++|+++++++......+++||++.
T Consensus         1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~------~~i~~~~~~~~~~~~~~~~~e~~~   74 (215)
T cd00180           1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNH------PNIVKLYGVFEDENHLYLVMEYCE   74 (215)
T ss_pred             CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCC------CCeeeEeeeeecCCeEEEEEecCC
Confidence            6899999999999988899999999987643  24678899999999998      999999999999999999999999


Q ss_pred             C-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          500 A-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       500 G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      + +|.+++.....     .++...++.++.|++.+|.+||+++++|.+|++-
T Consensus        75 ~~~l~~~~~~~~~-----~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~~~  121 (215)
T cd00180          75 GGSLKDLLKENEG-----KLSEDEILRILLQILEGLEYLHSNGIIHRDLKPE  121 (215)
T ss_pred             CCcHHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHh
Confidence            5 99999987531     1899999999999999999999999999999864

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=99.51  E-value=3.1e-14  Score=142.83  Aligned_cols=129  Identities=19%  Similarity=0.148  Sum_probs=114.1

Q ss_pred             cCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC-hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeC---
Q 008813          413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND-KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL---  488 (552)
Q Consensus       413 ~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s-k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~---  488 (552)
                      ..||++.+.||.|||+-|++++...+++.||+|.|.-. .+..+.+++|++..++++|      |||++++++...+   
T Consensus        20 ~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s------~~vl~l~dh~l~~~~D   93 (302)
T KOG2345|consen   20 NKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNS------PNVLRLVDHQLREEKD   93 (302)
T ss_pred             CceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCC------cchHHHHHHHHHhhcc
Confidence            37999999999999999999999999999999988654 3556789999999999999      9999999987644   


Q ss_pred             --CEEEEEEecCC-CCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCC--Ceeeeccc
Q 008813          489 --EHLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLL--VIYFILFC  549 (552)
Q Consensus       489 --~hLyIVmEll~-GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~g--IIH~~L~~  549 (552)
                        ...||+++|.. |+|.+.+...+.++.  .+++.++..|+.+|++||++||...  ++|+|||+
T Consensus        94 ~~~~~yll~Pyy~~Gsl~d~i~~~k~kg~--~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP  157 (302)
T KOG2345|consen   94 GKHEAYLLLPYYKRGSLLDEIERLKIKGN--FVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKP  157 (302)
T ss_pred             CceeEEEEeehhccccHHHHHHHHhhcCC--ccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCc
Confidence              34999999865 589999987776553  4999999999999999999999999  99999996

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.50  E-value=8.7e-14  Score=161.30  Aligned_cols=131  Identities=15%  Similarity=0.141  Sum_probs=111.4

Q ss_pred             cCceEEEEEeccCCceEEEEEEECCC-----CcEEEEEEEecC--hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEE
Q 008813          413 AGRYYVTEYLGSAAFSKVFQAQDLHT-----GVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYF  485 (552)
Q Consensus       413 ~~RY~Ile~LGkG~FG~VykA~Dkkt-----g~~VAVKIIk~s--k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F  485 (552)
                      ..+.++.+.||+|+||.||.|.....     ...||||.+++.  ......+++|..+|+.++|      ||||++++.+
T Consensus       691 ~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~H------pNiv~liGv~  764 (1025)
T KOG1095|consen  691 RKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDH------PNIVSLIGVC  764 (1025)
T ss_pred             hhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCC------cceeeEEEee
Confidence            35678889999999999999986532     234899999875  4455789999999999999      9999999999


Q ss_pred             EeCCEEEEEEecCCC-CHHHHHHhhccC-CCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          486 YHLEHLFIVCELLRA-NLYEFQKFNQES-GGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       486 ~~~~hLyIVmEll~G-sL~d~Lk~~~~~-g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ......+|++|||.+ +|..||+..+.. .....++..+...|+.||++|+.||+++++||+||-|
T Consensus       765 l~~~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAa  830 (1025)
T KOG1095|consen  765 LDSGPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAA  830 (1025)
T ss_pred             cCCCCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhh
Confidence            999999999999987 999999976211 1123389999999999999999999999999999975

>PRK10345 hypothetical protein; Provisional

Probab=99.50  E-value=1.9e-13  Score=134.49  Aligned_cols=118  Identities=16%  Similarity=0.168  Sum_probs=93.0

Q ss_pred             EEEeccCCceEEEEEEECCCCcEEEEEEEecC-hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCC---EEE-E
Q 008813          419 TEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND-KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE---HLF-I  493 (552)
Q Consensus       419 le~LGkG~FG~VykA~Dkktg~~VAVKIIk~s-k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~---hLy-I  493 (552)
                      ...||+|+||.||.  +..+... +||++... ....+.+.+|+++++.|.| ...++|||+++++++.+..   .++ +
T Consensus         7 ~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~-~~~~h~nIvr~yg~~et~~g~g~v~~~   82 (210)
T PRK10345          7 QSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSR-RLIDWSGIPRYYGTVETDCGTGYVYDV   82 (210)
T ss_pred             cceecCCCceEEEE--CCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhc-cCCCCcccceeeEEEEeCCCCeEEEEE
Confidence            36899999999995  5556555 69998764 2234678999999999965 3345699999999999873   444 7


Q ss_pred             EEecCC--C-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHH-HHHHhCCCeeeeccc
Q 008813          494 VCELLR--A-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLL-MLIFLLLVIYFILFC  549 (552)
Q Consensus       494 VmEll~--G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL-~YLHs~gIIH~~L~~  549 (552)
                      ||||++  + +|.+++++..       +++.  ..++.|++.++ +|||+++|||+||||
T Consensus        83 I~e~~G~~~~tL~~~l~~~~-------~~e~--~~~~~~~L~~l~~yLh~~~IvhrDlKp  133 (210)
T PRK10345         83 IADFDGKPSITLTEFAEQCR-------YEED--VAQLRQLLKKLKRYLLDNRIVTMELKP  133 (210)
T ss_pred             EecCCCCcchhHHHHHHccc-------ccHh--HHHHHHHHHHHHHHHHHCCEeecCCCH
Confidence            899965  4 9999997632       5665  35688888888 899999999999997

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=99.49  E-value=1.9e-13  Score=130.58  Aligned_cols=116  Identities=12%  Similarity=0.050  Sum_probs=88.4

Q ss_pred             EEEeccCCceEEEEEEECCCCcEEEEEEEecChh---------------------------hHHHHHHHHHHHHHhcccC
Q 008813          419 TEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD---------------------------FFDQSLDEIKLLKLVNKND  471 (552)
Q Consensus       419 le~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~---------------------------~~~~~lrEIkILk~L~hhd  471 (552)
                      ...||+|+||+||+|.+. +|+.||||+++....                           ......+|...+.++.+  
T Consensus         2 ~~~ig~G~~~~Vy~a~~~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~--   78 (190)
T cd05145           2 NGCISTGKEANVYHARTG-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYE--   78 (190)
T ss_pred             CceeecCCCcEEEEEEcC-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHh--
Confidence            468999999999999987 899999999986411                           01223578999999998  


Q ss_pred             CCCCCCeeEeEeEEEeCCEEEEEEecCCC-CHH-HHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHh-CCCeeeecc
Q 008813          472 PADEHHILRLYDYFYHLEHLFIVCELLRA-NLY-EFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFL-LLVIYFILF  548 (552)
Q Consensus       472 ~~d~pnIVrL~d~F~~~~hLyIVmEll~G-sL~-d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs-~gIIH~~L~  548 (552)
                          ++|.....+....  .||||||+++ ++. ..+...       +++...+..++.|++.+|.+||+ +||+|+|||
T Consensus        79 ----~~i~~p~~~~~~~--~~lVmE~~~g~~~~~~~l~~~-------~~~~~~~~~i~~~l~~~l~~lH~~~givHrDlk  145 (190)
T cd05145          79 ----AGVPVPEPILLKK--NVLVMEFIGDDGSPAPRLKDV-------PLEEEEAEELYEQVVEQMRRLYQEAGLVHGDLS  145 (190)
T ss_pred             ----CCCCCceEEEecC--CEEEEEEecCCCchhhhhhhc-------cCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCC
Confidence                6664433333322  4899999988 343 334332       17888999999999999999999 999999999


Q ss_pred             cc
Q 008813          549 CF  550 (552)
Q Consensus       549 ~~  550 (552)
                      +-
T Consensus       146 P~  147 (190)
T cd05145         146 EY  147 (190)
T ss_pred             hh
Confidence            73

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.48  E-value=6.9e-13  Score=124.10  Aligned_cols=124  Identities=27%  Similarity=0.381  Sum_probs=110.2

Q ss_pred             eEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChh--hHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEEEE
Q 008813          416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD--FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFI  493 (552)
Q Consensus       416 Y~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~--~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hLyI  493 (552)
                      |.+.+.||.|++|.||++....+++.+|||.+.....  ..+.+.+|+..++.++|      +||+++++++......++
T Consensus         1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~------~~i~~~~~~~~~~~~~~~   74 (225)
T smart00221        1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKH------PNIVKLYGVFEDPEPLYL   74 (225)
T ss_pred             CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCC------CChhhheeeeecCCceEE
Confidence            5678899999999999999998899999999986532  46788899999999987      999999999999899999


Q ss_pred             EEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          494 VCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       494 VmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      ++|++.+ +|.+++......     +++..+..++.|++.+|.+||.++++|.+|++-
T Consensus        75 v~e~~~~~~L~~~~~~~~~~-----~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~~~  127 (225)
T smart00221       75 VMEYCEGGDLFDYLRKKGGK-----LSEEEARFYLRQILEALEYLHSLGIVHRDLKPE  127 (225)
T ss_pred             EEeccCCCCHHHHHHhcccC-----CCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHH
Confidence            9999998 999998865421     688999999999999999999999999999863

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.47  E-value=9.6e-14  Score=150.92  Aligned_cols=128  Identities=23%  Similarity=0.199  Sum_probs=108.7

Q ss_pred             CceEEEEEeccCCceEEEEEEECCCCcEEEEEEEec---ChhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCE
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKN---DKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH  490 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~---sk~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~h  490 (552)
                      .-|+++++||+||-++||++..... +.||+|.+..   +....+.+++||.+|.+|+.+     .+||+||||-...+.
T Consensus       361 ~~Yeilk~iG~GGSSkV~kV~~s~~-~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~-----~~IIqL~DYEv~d~~  434 (677)
T KOG0596|consen  361 REYEILKQIGSGGSSKVFKVLNSDK-QIYALKKVVLLEADNQTLDGYRNEIALLNKLKGH-----DKIIQLYDYEVTDGY  434 (677)
T ss_pred             chhhHHHhhcCCCcceeeeeecCCC-cchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCC-----ceEEEEeeeeccCce
Confidence            4599999999999999999986544 4556555433   344667899999999999986     899999999999999


Q ss_pred             EEEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccccCC
Q 008813          491 LFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCFSF  552 (552)
Q Consensus       491 LyIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~~~  552 (552)
                      +|||||+-+.+|..+|+++...     ++.-.++.|..|||.|+.++|.+||||-|||+--|
T Consensus       435 lYmvmE~Gd~DL~kiL~k~~~~-----~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANF  491 (677)
T KOG0596|consen  435 LYMVMECGDIDLNKILKKKKSI-----DPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANF  491 (677)
T ss_pred             EEEEeecccccHHHHHHhccCC-----CchHHHHHHHHHHHHHHHHHHHhceeecCCCcccE
Confidence            9999998888999999987643     44458999999999999999999999999998543

>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.45  E-value=1.5e-15  Score=152.79  Aligned_cols=126  Identities=21%  Similarity=0.313  Sum_probs=109.8

Q ss_pred             cCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEec---ChhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeC-
Q 008813          413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKN---DKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL-  488 (552)
Q Consensus       413 ~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~---sk~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~-  488 (552)
                      .+.|+-+.+||+|.||.||+|+.+.+++.||+|++-.   ...+-..+++|+++|..|+|      +||+.|+..+... 
T Consensus        16 ~~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkH------env~nliEic~tk~   89 (376)
T KOG0669|consen   16 VSKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKH------ENVVNLIEICRTKA   89 (376)
T ss_pred             chHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcc------hhHHHHHHHHhhcc
Confidence            3678888999999999999999999999999986543   23455678999999999999      8999888877532 


Q ss_pred             -------CEEEEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          489 -------EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       489 -------~hLyIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                             ..+|+||.+|..+|.-+|.....+     |+..+|+.++.+++.||.|||++.|+|+|+|+
T Consensus        90 Tp~~r~r~t~ylVf~~cehDLaGlLsn~~vr-----~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKa  152 (376)
T KOG0669|consen   90 TPTNRDRATFYLVFDFCEHDLAGLLSNRKVR-----FSLSEIKKVMKGLMNGLYYIHRNKILHRDMKA  152 (376)
T ss_pred             CCcccccceeeeeHHHhhhhHHHHhcCcccc-----ccHHHHHHHHHHHHHHHHHHHHhhHHhhcccH
Confidence                   459999999999999999876543     99999999999999999999999999999997

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.45  E-value=4.4e-14  Score=149.42  Aligned_cols=126  Identities=22%  Similarity=0.260  Sum_probs=111.0

Q ss_pred             cCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC----hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeC
Q 008813          413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND----KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL  488 (552)
Q Consensus       413 ~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s----k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~  488 (552)
                      ...|..+.+||+|+||+|.+|..+.+.+.+||||+++.    .+-.+-...|-++|......     |.+++|..+|++-
T Consensus       348 ~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kp-----pFL~qlHScFQTm  422 (683)
T KOG0696|consen  348 ATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKP-----PFLVQLHSCFQTM  422 (683)
T ss_pred             ecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCC-----chHHHHHHHhhhh
Confidence            46789999999999999999999999999999999875    22234556788888877664     8999999999999


Q ss_pred             CEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          489 EHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       489 ~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      +.+|+||||+.| +|.-.|++-+.      |-+..+..|+.+|+-||-|||++|||++|||-
T Consensus       423 DRLyFVMEyvnGGDLMyhiQQ~Gk------FKEp~AvFYAaEiaigLFFLh~kgIiYRDLKL  478 (683)
T KOG0696|consen  423 DRLYFVMEYVNGGDLMYHIQQVGK------FKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKL  478 (683)
T ss_pred             hheeeEEEEecCchhhhHHHHhcc------cCCchhhhhhHHHHHHhhhhhcCCeeeeeccc
Confidence            999999999987 99888887765      88999999999999999999999999999983

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.42  E-value=1.4e-13  Score=142.81  Aligned_cols=127  Identities=17%  Similarity=0.192  Sum_probs=110.9

Q ss_pred             ecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC----hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEe
Q 008813          412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND----KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH  487 (552)
Q Consensus       412 i~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s----k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~  487 (552)
                      -...|.++.+||+|+|.+|.+++.++|.+.||+|++++.    ..-.+.++.|-.+.....++     |.+|-|..+|.+
T Consensus       248 ~l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~-----pflvglhscfqt  322 (593)
T KOG0695|consen  248 GLQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNN-----PFLVGLHSCFQT  322 (593)
T ss_pred             ccccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCC-----CeEEehhhhhcc
Confidence            345799999999999999999999999999999999863    22345667788888877665     999999999999


Q ss_pred             CCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          488 LEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       488 ~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ...+++|.||+.| +|.-.+++.+.      |+++.++.+..+|+.||.|||++|||++|||-
T Consensus       323 esrlffvieyv~ggdlmfhmqrqrk------lpeeharfys~ei~lal~flh~rgiiyrdlkl  379 (593)
T KOG0695|consen  323 ESRLFFVIEYVNGGDLMFHMQRQRK------LPEEHARFYSAEICLALNFLHERGIIYRDLKL  379 (593)
T ss_pred             cceEEEEEEEecCcceeeehhhhhc------CcHHHhhhhhHHHHHHHHHHhhcCeeeeeccc
Confidence            9999999999987 88777766543      99999999999999999999999999999983

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.42  E-value=4.4e-13  Score=142.92  Aligned_cols=132  Identities=18%  Similarity=0.278  Sum_probs=113.7

Q ss_pred             CCCcceeeCceecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChhhHHHHHHHHHHHHH--hcccCCCCCCCe
Q 008813          401 NKDLPIILNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKL--VNKNDPADEHHI  478 (552)
Q Consensus       401 ~~~y~v~~gdvi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~~~~~~lrEIkILk~--L~hhd~~d~pnI  478 (552)
                      +...++.+...++....+.+.||+|.||.||+|+++  |+.||||++....+  ..+.||.+|.+.  |+|      +||
T Consensus       198 GSGlplLVQRTiarqI~L~e~IGkGRyGEVwrG~wr--Ge~VAVKiF~srdE--~SWfrEtEIYqTvmLRH------ENI  267 (513)
T KOG2052|consen  198 GSGLPLLVQRTIARQIVLQEIIGKGRFGEVWRGRWR--GEDVAVKIFSSRDE--RSWFRETEIYQTVMLRH------ENI  267 (513)
T ss_pred             CCCchhHhHHhhhheeEEEEEecCccccceeecccc--CCceEEEEecccch--hhhhhHHHHHHHHHhcc------chh
Confidence            356777888889999999999999999999999985  78999999976543  567899999987  677      999


Q ss_pred             eEeEeEEEeC----CEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhC--------CCeee
Q 008813          479 LRLYDYFYHL----EHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLL--------LVIYF  545 (552)
Q Consensus       479 VrL~d~F~~~----~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~--------gIIH~  545 (552)
                      +.++..-...    ..+|||++|.+. +|+++|.++.       ++.+....++.-++.||++||..        .|.|+
T Consensus       268 LgFIaaD~~~~gs~TQLwLvTdYHe~GSL~DyL~r~t-------v~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHR  340 (513)
T KOG2052|consen  268 LGFIAADNKDNGSWTQLWLVTDYHEHGSLYDYLNRNT-------VTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHR  340 (513)
T ss_pred             hhhhhccccCCCceEEEEEeeecccCCcHHHHHhhcc-------CCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhcc
Confidence            9999887654    359999999986 9999999854       89999999999999999999932        49999


Q ss_pred             eccc
Q 008813          546 ILFC  549 (552)
Q Consensus       546 ~L~~  549 (552)
                      |||.
T Consensus       341 DlKS  344 (513)
T KOG2052|consen  341 DLKS  344 (513)
T ss_pred             cccc
Confidence            9984

>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.41  E-value=7.4e-13  Score=137.50  Aligned_cols=129  Identities=18%  Similarity=0.223  Sum_probs=115.9

Q ss_pred             ecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEE
Q 008813          412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL  491 (552)
Q Consensus       412 i~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hL  491 (552)
                      +.-.|+|.++||.|+||.++.+...-+++.||||.-.... ..-++..|.+..+.|.+.     ++|+..|.+-....|-
T Consensus        26 VG~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS-~APQLrdEYr~YKlL~g~-----~GIP~vYYFGqeG~~N   99 (449)
T KOG1165|consen   26 VGPHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKS-EAPQLRDEYRTYKLLGGT-----EGIPQVYYFGQEGKYN   99 (449)
T ss_pred             ecccceeccccccCcceeeecccccccCceEEEEeccccC-CcchHHHHHHHHHHHcCC-----CCCCceeeeccccchh
Confidence            3356999999999999999999999999999999876542 245788999999999986     9999999988888999


Q ss_pred             EEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccccC
Q 008813          492 FIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCFS  551 (552)
Q Consensus       492 yIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~~  551 (552)
                      .||||+++.+|.+++.-+.++     |+.+.+..|+.|++.-++|+|++.+|.+|+|+=-
T Consensus       100 iLVidLLGPSLEDLFD~CgR~-----FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdN  154 (449)
T KOG1165|consen  100 ILVIDLLGPSLEDLFDLCGRR-----FSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDN  154 (449)
T ss_pred             hhhhhhhCcCHHHHHHHhcCc-----ccHHhHHHHHHHHHHHHHHHHhcceeecccCccc
Confidence            999999999999999988764     9999999999999999999999999999999743

>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.40  E-value=9.7e-14  Score=161.58  Aligned_cols=126  Identities=22%  Similarity=0.270  Sum_probs=114.4

Q ss_pred             ecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC---hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeC
Q 008813          412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL  488 (552)
Q Consensus       412 i~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s---k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~  488 (552)
                      +.-||+-...||.|.||+||.|.+..+|...|+|-|+..   ......+.+|+++|..|+|      ||||++|+.-.++
T Consensus      1233 V~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnH------pNlV~YyGVEvHR 1306 (1509)
T KOG4645|consen 1233 VTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNH------PNLVRYYGVEVHR 1306 (1509)
T ss_pred             ceeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccC------ccccccCceeecH
Confidence            446888899999999999999999999999999988653   3345678899999999999      9999999999999


Q ss_pred             CEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          489 EHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       489 ~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      +.++|.||||.+ +|.+++...+.      .++...+.+..|++.||.|||+.||||+|+|.
T Consensus      1307 ekv~IFMEyC~~GsLa~ll~~gri------~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~ 1362 (1509)
T KOG4645|consen 1307 EKVYIFMEYCEGGSLASLLEHGRI------EDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKP 1362 (1509)
T ss_pred             HHHHHHHHHhccCcHHHHHHhcch------hhhhHHHHHHHHHHHHHHHHHhcCceecCCCc
Confidence            999999999987 99999987654      78889999999999999999999999999986

>smart00090 RIO RIO-like kinase

Probab=99.39  E-value=9.7e-13  Score=131.17  Aligned_cols=120  Identities=10%  Similarity=-0.039  Sum_probs=91.2

Q ss_pred             eEEEEEeccCCceEEEEEE-ECCCCcEEEEEEEecChh-------------------------hHHHHHHHHHHHHHhcc
Q 008813          416 YYVTEYLGSAAFSKVFQAQ-DLHTGVDVCLKIIKNDKD-------------------------FFDQSLDEIKLLKLVNK  469 (552)
Q Consensus       416 Y~Ile~LGkG~FG~VykA~-Dkktg~~VAVKIIk~sk~-------------------------~~~~~lrEIkILk~L~h  469 (552)
                      |.+.+.||+|+||+||+|. +..+|+.||||+++....                         ....+.+|+.+++++.+
T Consensus        30 ~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~~  109 (237)
T smart00090       30 SAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLYE  109 (237)
T ss_pred             HHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence            7788999999999999999 667899999999975310                         11235689999999986


Q ss_pred             cCCCCCCCeeEeEeEEEeCCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCC-Ceeeec
Q 008813          470 NDPADEHHILRLYDYFYHLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLL-VIYFIL  547 (552)
Q Consensus       470 hd~~d~pnIVrL~d~F~~~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~g-IIH~~L  547 (552)
                      .    ...+++.+..   . ..+|||||+++ +|..++....      ++....+..++.||+.+|.+||.+| |+|.||
T Consensus       110 ~----~i~~p~~~~~---~-~~~lV~E~~~g~~L~~~~~~~~------~~~~~~~~~i~~qi~~~l~~LH~~g~iiH~Di  175 (237)
T smart00090      110 A----GVPVPKPIAW---R-RNVLVMEFIGGDGLPAPRLKDV------EPEEEEEFELYDDILEEMRKLYKEGELVHGDL  175 (237)
T ss_pred             c----CCCCCeeeEe---c-CceEEEEEecCCcccccccccC------CcchHHHHHHHHHHHHHHHHHHhcCCEEeCCC
Confidence            1    1334444432   2 34899999999 6655432222      1566778899999999999999999 999999


Q ss_pred             cc
Q 008813          548 FC  549 (552)
Q Consensus       548 ~~  549 (552)
                      ++
T Consensus       176 kp  177 (237)
T smart00090      176 SE  177 (237)
T ss_pred             Ch
Confidence            87

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=99.39  E-value=3.3e-13  Score=142.79  Aligned_cols=125  Identities=20%  Similarity=0.276  Sum_probs=110.9

Q ss_pred             cCceEEEEEeccCCceEEEEEEECC---CCcEEEEEEEecChhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCC
Q 008813          413 AGRYYVTEYLGSAAFSKVFQAQDLH---TGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE  489 (552)
Q Consensus       413 ~~RY~Ile~LGkG~FG~VykA~Dkk---tg~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~  489 (552)
                      ..-|.++++||.|.|+.||++.+..   ..+.||+|.|.... .-..+.+|+++|..+..+     .||+.+.+++...+
T Consensus        35 ~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts-~p~ri~~El~~L~~~gG~-----~ni~~~~~~~rnnd  108 (418)
T KOG1167|consen   35 SNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTS-SPSRILNELEMLYRLGGS-----DNIIKLNGCFRNND  108 (418)
T ss_pred             hhhhhhhccccccchhhhhhhhHhhhccccceEeeeeccccc-CchHHHHHHHHHHHhccc-----hhhhcchhhhccCC
Confidence            3468899999999999999999887   78899999987542 235688999999999876     89999999999999


Q ss_pred             EEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccccCC
Q 008813          490 HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCFSF  552 (552)
Q Consensus       490 hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~~~  552 (552)
                      +.+|||||++. ...+++..         ++...++.+++.++.||.++|.+||||+|+|+-.|
T Consensus       109 ~v~ivlp~~~H~~f~~l~~~---------l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNF  163 (418)
T KOG1167|consen  109 QVAIVLPYFEHDRFRDLYRS---------LSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSNF  163 (418)
T ss_pred             eeEEEecccCccCHHHHHhc---------CCHHHHHHHHHHHHHHhhhhhccCccccCCCcccc
Confidence            99999999998 77777765         78899999999999999999999999999998554

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.39  E-value=2.7e-13  Score=150.36  Aligned_cols=125  Identities=20%  Similarity=0.258  Sum_probs=107.2

Q ss_pred             CceEEEEEeccCCceEEEEEEECCC-C--cEEEEEEEecChh--hHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeC
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLHT-G--VDVCLKIIKNDKD--FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL  488 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkkt-g--~~VAVKIIk~sk~--~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~  488 (552)
                      +...+.++||+|.||.|++|.+... |  ..||||+++....  ..+.+++|+.+|.+|.|      +|+|+||+...+ 
T Consensus       110 e~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H------~hliRLyGvVl~-  182 (1039)
T KOG0199|consen  110 EQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQH------PHLIRLYGVVLD-  182 (1039)
T ss_pred             HHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccC------cceeEEeeeecc-
Confidence            4566778999999999999998753 3  4589999987533  45789999999999999      999999999887 


Q ss_pred             CEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          489 EHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       489 ~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ..+.||||++.. +|.+.|+....    ..|....+..|+.||+.||.||..+++||+||-+
T Consensus       183 qp~mMV~ELaplGSLldrLrka~~----~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAA  240 (1039)
T KOG0199|consen  183 QPAMMVFELAPLGSLLDRLRKAKK----AILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAA  240 (1039)
T ss_pred             chhhHHhhhcccchHHHHHhhccc----cceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhh
Confidence            678999999986 99999987332    2388999999999999999999999999999964

>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]

Probab=99.37  E-value=1.2e-12  Score=144.03  Aligned_cols=124  Identities=20%  Similarity=0.280  Sum_probs=106.6

Q ss_pred             CceEEEEEeccCCceEEEEEEECCC----CcEEEEEEEecC--hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEe
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLHT----GVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH  487 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkkt----g~~VAVKIIk~s--k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~  487 (552)
                      ++..+.++||.|-||.||+|.....    ...||||.-+.+  ....+.++.|.-+++.+.|      ||||+|++.+..
T Consensus       389 e~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdH------phIikLIGv~~e  462 (974)
T KOG4257|consen  389 ELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDH------PHIIKLIGVCVE  462 (974)
T ss_pred             hhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCC------cchhheeeeeec
Confidence            4456677899999999999986432    345899998874  4457889999999999999      999999999875


Q ss_pred             CCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          488 LEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       488 ~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                       ..+|||||++.- .|..+|+.++..     |+......++.||+.||.|||+.++||+|+-+
T Consensus       463 -~P~WivmEL~~~GELr~yLq~nk~s-----L~l~tL~ly~~Qi~talaYLeSkrfVHRDIAa  519 (974)
T KOG4257|consen  463 -QPMWIVMELAPLGELREYLQQNKDS-----LPLRTLTLYCYQICTALAYLESKRFVHRDIAA  519 (974)
T ss_pred             -cceeEEEecccchhHHHHHHhcccc-----chHHHHHHHHHHHHHHHHHHHhhchhhhhhhh
Confidence             468999999985 999999998864     89999999999999999999999999999854

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=99.37  E-value=4.9e-14  Score=155.56  Aligned_cols=126  Identities=17%  Similarity=0.211  Sum_probs=112.8

Q ss_pred             ecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChh-hHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCE
Q 008813          412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD-FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH  490 (552)
Q Consensus       412 i~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~-~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~h  490 (552)
                      ...+|+++..+|.|+||.||+|+|+.+++..|+|+++.... ...-++.||-+++..+|      +|||.+++.+..+..
T Consensus        13 P~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h------~nivay~gsylr~dk   86 (829)
T KOG0576|consen   13 PQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRH------PNIVAYFGSYLRRDK   86 (829)
T ss_pred             CccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCC------cChHHHHhhhhhhcC
Confidence            34679999999999999999999999999999999998643 34567789999999998      999999999999999


Q ss_pred             EEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          491 LFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       491 LyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      +||.||||++ +|.+...-.      .++++.++..+.+..+.||.|||++|-||+|+|-
T Consensus        87 lwicMEycgggslQdiy~~T------gplselqiayvcRetl~gl~ylhs~gk~hRdiKG  140 (829)
T KOG0576|consen   87 LWICMEYCGGGSLQDIYHVT------GPLSELQIAYVCRETLQGLKYLHSQGKIHRDIKG  140 (829)
T ss_pred             cEEEEEecCCCcccceeeec------ccchhHHHHHHHhhhhccchhhhcCCcccccccc
Confidence            9999999998 888865433      3599999999999999999999999999999984

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.37  E-value=4.5e-12  Score=118.85  Aligned_cols=112  Identities=29%  Similarity=0.387  Sum_probs=100.4

Q ss_pred             CceEEEEEEECCCCcEEEEEEEecChh-h-HHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEEEEEEecCCC-CH
Q 008813          426 AFSKVFQAQDLHTGVDVCLKIIKNDKD-F-FDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCELLRA-NL  502 (552)
Q Consensus       426 ~FG~VykA~Dkktg~~VAVKIIk~sk~-~-~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hLyIVmEll~G-sL  502 (552)
                      +||.||+|.+..+++.+|+|++..... . .+.+.+|+++++.++|      +||+++++++......+++||++.+ +|
T Consensus         1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~------~~i~~~~~~~~~~~~~~l~~e~~~~~~L   74 (244)
T smart00220        1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKH------PNIVRLYDVFEDEDKLYLVMEYCDGGDL   74 (244)
T ss_pred             CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCC------CcHHHHHhheeeCCEEEEEEeCCCCCCH
Confidence            589999999998899999999976422 1 4788899999999987      9999999999999999999999998 99


Q ss_pred             HHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          503 YEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       503 ~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      .+++.....      ++...+..++.|++.+|.|||+.+|+|.+|++
T Consensus        75 ~~~~~~~~~------~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~  115 (244)
T smart00220       75 FDLLKKRGR------LSEDEARFYARQILSALEYLHSNGIIHRDLKP  115 (244)
T ss_pred             HHHHHhccC------CCHHHHHHHHHHHHHHHHHHHHcCeecCCcCH
Confidence            999886543      78999999999999999999999999999975

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=99.36  E-value=4e-12  Score=139.97  Aligned_cols=136  Identities=15%  Similarity=0.174  Sum_probs=98.8

Q ss_pred             cCceEEEEEeccCCceEEEEEEEC----------------CCCcEEEEEEEecChh-h--------------HHHHHHHH
Q 008813          413 AGRYYVTEYLGSAAFSKVFQAQDL----------------HTGVDVCLKIIKNDKD-F--------------FDQSLDEI  461 (552)
Q Consensus       413 ~~RY~Ile~LGkG~FG~VykA~Dk----------------ktg~~VAVKIIk~sk~-~--------------~~~~lrEI  461 (552)
                      .++|.+.++||+|+||.||+|.+.                ..++.||||.++.... .              .+....|+
T Consensus       144 ~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE~  223 (507)
T PLN03224        144 SDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVEA  223 (507)
T ss_pred             ccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHHH
Confidence            457999999999999999999752                2456799999875321 1              12234577


Q ss_pred             HHHHHhcccCCCCCCCeeEeEeEEEe--------CCEEEEEEecCCC-CHHHHHHhhccC-----------C-------C
Q 008813          462 KLLKLVNKNDPADEHHILRLYDYFYH--------LEHLFIVCELLRA-NLYEFQKFNQES-----------G-------G  514 (552)
Q Consensus       462 kILk~L~hhd~~d~pnIVrL~d~F~~--------~~hLyIVmEll~G-sL~d~Lk~~~~~-----------g-------~  514 (552)
                      .++.+++|+ +....++++++++|..        .+..||||||+.+ +|.+++......           +       .
T Consensus       224 ~~l~~l~~~-~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~  302 (507)
T PLN03224        224 YMCAKIKRN-PIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP  302 (507)
T ss_pred             HHHHHhhcc-cchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence            777788762 2223455777777753        3568999999987 999988743210           0       0


Q ss_pred             CcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          515 EAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       515 ~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ...+++..++.|+.||+.||.|||+++|||+|||+
T Consensus       303 ~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp  337 (507)
T PLN03224        303 QDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKP  337 (507)
T ss_pred             cccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCch
Confidence            01246778999999999999999999999999997

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=99.36  E-value=3.6e-12  Score=127.65  Aligned_cols=127  Identities=9%  Similarity=0.055  Sum_probs=101.5

Q ss_pred             CCcceeeCceecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC----hhhHHH------HHHHHHHHHHhcccC
Q 008813          402 KDLPIILNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND----KDFFDQ------SLDEIKLLKLVNKND  471 (552)
Q Consensus       402 ~~y~v~~gdvi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s----k~~~~~------~lrEIkILk~L~hhd  471 (552)
                      ..|.....+.+.+||++++.||.|+||.||++.+  ++..+|||+++..    +.....      +.+|++.+.+|.|  
T Consensus        19 ~~~~~~~~~~l~~~y~~~~~l~~~~f~~v~l~~~--~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~--   94 (232)
T PRK10359         19 NKYKEIFDDFLSYNIKTIKVFRNIDDTKVSLIDT--DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRS--   94 (232)
T ss_pred             ccHHHHHHHHhhCceEEEEEecCCCceEEEEEec--CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHH--
Confidence            3466667778899999999999999999999765  4668999999753    222222      5799999999998  


Q ss_pred             CCCCCCeeEeEeEEEeC--------CEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCC
Q 008813          472 PADEHHILRLYDYFYHL--------EHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLV  542 (552)
Q Consensus       472 ~~d~pnIVrL~d~F~~~--------~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gI  542 (552)
                          ++|+.+.+++...        +..+|||||++| +|.++..          +++.    ...||+.+|..||++||
T Consensus        95 ----~GI~~~~d~~~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~~----------~~~~----~~~~i~~~l~~lH~~gi  156 (232)
T PRK10359         95 ----EGLASLNDFYLLAERKTLRYAHTYIMLIEYIEGVELNDMPE----------ISED----VKAKIKASIESLHQHGM  156 (232)
T ss_pred             ----CCCCcceEeeeecccccccccCCeEEEEEEECCccHHHhhh----------ccHH----HHHHHHHHHHHHHHcCC
Confidence                9999999987644        358999999998 8977632          3432    45699999999999999


Q ss_pred             eeeecccc
Q 008813          543 IYFILFCF  550 (552)
Q Consensus       543 IH~~L~~~  550 (552)
                      +|.||++-
T Consensus       157 ~H~Dikp~  164 (232)
T PRK10359        157 VSGDPHKG  164 (232)
T ss_pred             ccCCCChH
Confidence            99999873

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=99.36  E-value=1.5e-12  Score=145.96  Aligned_cols=125  Identities=17%  Similarity=0.198  Sum_probs=112.5

Q ss_pred             CceEEEEEeccCCceEEEEEEECCCC---cEEEEEEEecC--hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeC
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLHTG---VDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL  488 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkktg---~~VAVKIIk~s--k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~  488 (552)
                      ....|.++||.|-||.|++++.+..+   ..||||.++..  .+.+..++.|..||-++.|      ||||+|.+.....
T Consensus       629 s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdH------PNIIrLEGVVTks  702 (996)
T KOG0196|consen  629 SCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDH------PNIIRLEGVVTKS  702 (996)
T ss_pred             hheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCC------CcEEEEEEEEecC
Confidence            55678899999999999999988665   46999999874  4456779999999999999      9999999999999


Q ss_pred             CEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          489 EHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       489 ~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ..+.||+|||.. +|..||+.+...     |+.-++..+++.|+.||.||-++++||+||-+
T Consensus       703 ~PvMIiTEyMENGsLDsFLR~~DGq-----ftviQLVgMLrGIAsGMkYLsdm~YVHRDLAA  759 (996)
T KOG0196|consen  703 KPVMIITEYMENGSLDSFLRQNDGQ-----FTVIQLVGMLRGIASGMKYLSDMNYVHRDLAA  759 (996)
T ss_pred             ceeEEEhhhhhCCcHHHHHhhcCCc-----eEeehHHHHHHHHHHHhHHHhhcCchhhhhhh
Confidence            999999999987 999999988743     89999999999999999999999999999965

>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]

Probab=99.34  E-value=8.2e-14  Score=150.26  Aligned_cols=127  Identities=17%  Similarity=0.189  Sum_probs=112.1

Q ss_pred             eecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC----hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEE
Q 008813          411 VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND----KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFY  486 (552)
Q Consensus       411 vi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s----k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~  486 (552)
                      +-....+++..||-|+||+|=++........+|+|++++.    ....+++..|-+||.....      +.||+||..|.
T Consensus       417 v~l~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s------~fIvrLYrTfr  490 (732)
T KOG0614|consen  417 VKLSDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRS------DFIVRLYRTFR  490 (732)
T ss_pred             cchhhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCc------hHHHHHHHHhc
Confidence            3345677888999999999998887766667899999864    3455788999999999997      99999999999


Q ss_pred             eCCEEEEEEecC-CCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          487 HLEHLFIVCELL-RANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       487 ~~~hLyIVmEll-~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      +.+++|++||-| +|.|+..|+.++.      |.+..++.|+..+++|++|||++|||++|||+
T Consensus       491 d~kyvYmLmEaClGGElWTiLrdRg~------Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKP  548 (732)
T KOG0614|consen  491 DSKYVYMLMEACLGGELWTILRDRGS------FDDYTARFYVACVLEAFEYLHRKGIIYRDLKP  548 (732)
T ss_pred             cchhhhhhHHhhcCchhhhhhhhcCC------cccchhhhhHHHHHHHHHHHHhcCceeccCCh
Confidence            999999999996 5599999998775      99999999999999999999999999999996

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=99.32  E-value=7.6e-12  Score=139.26  Aligned_cols=128  Identities=13%  Similarity=-0.001  Sum_probs=87.1

Q ss_pred             cCceEEEEEeccCCceEEEEEEECCC----CcEEEEEEEecChhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeE----
Q 008813          413 AGRYYVTEYLGSAAFSKVFQAQDLHT----GVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDY----  484 (552)
Q Consensus       413 ~~RY~Ile~LGkG~FG~VykA~Dkkt----g~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~----  484 (552)
                      .++|++.+.||+|+||.||+|.+..+    +..||||.+.....      .|+.+...+.+..   ..+++.+...    
T Consensus       131 ~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~------~e~~~~e~l~~~~---~~~~~~~~~~~~~~  201 (566)
T PLN03225        131 KDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA------VEIWMNERVRRAC---PNSCADFVYGFLEP  201 (566)
T ss_pred             cCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch------hHHHHHHHHHhhc---hhhHHHHHHhhhcc
Confidence            35799999999999999999999988    89999998864321      1222222222100   0122222221    


Q ss_pred             --EEeCCEEEEEEecCCC-CHHHHHHhhccCC--------------CCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeec
Q 008813          485 --FYHLEHLFIVCELLRA-NLYEFQKFNQESG--------------GEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFIL  547 (552)
Q Consensus       485 --F~~~~hLyIVmEll~G-sL~d~Lk~~~~~g--------------~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L  547 (552)
                        ......++|||||+++ +|.+++.......              .........++.|+.||+.||.|||+++|||+||
T Consensus       202 ~~~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRDL  281 (566)
T PLN03225        202 VSSKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRDV  281 (566)
T ss_pred             cccccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCcC
Confidence              1345679999999987 8999987543100              0000124457789999999999999999999999


Q ss_pred             cc
Q 008813          548 FC  549 (552)
Q Consensus       548 ~~  549 (552)
                      |+
T Consensus       282 KP  283 (566)
T PLN03225        282 KP  283 (566)
T ss_pred             CH
Confidence            97

>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]

Probab=99.32  E-value=1.2e-12  Score=147.20  Aligned_cols=121  Identities=17%  Similarity=0.178  Sum_probs=105.6

Q ss_pred             EEEEEeccCCceEEEEEEECCCC----cEEEEEEEecCh--hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCE
Q 008813          417 YVTEYLGSAAFSKVFQAQDLHTG----VDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH  490 (552)
Q Consensus       417 ~Ile~LGkG~FG~VykA~Dkktg----~~VAVKIIk~sk--~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~h  490 (552)
                      +..++||+|+||.||++.+...+    ..||||++....  .....++.|+-+|..|.|      ||+++|++++.... 
T Consensus       699 kk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldH------pnl~RLLgvc~~s~-  771 (1177)
T KOG1025|consen  699 KKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDH------PNLLRLLGVCMLST-  771 (1177)
T ss_pred             hhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCC------chHHHHhhhcccch-
Confidence            44678999999999999987555    468999987653  235778999999999999      99999999998776 


Q ss_pred             EEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          491 LFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       491 LyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      +-||++||.. +|.++++.++..     +-.+..+.|..||++||.|||.+++||++|.+
T Consensus       772 ~qlvtq~mP~G~LlDyvr~hr~~-----igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaa  826 (1177)
T KOG1025|consen  772 LQLVTQLMPLGCLLDYVREHRDN-----IGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAA  826 (1177)
T ss_pred             HHHHHHhcccchHHHHHHHhhcc-----ccHHHHHHHHHHHHHHHHHHHhcchhhhhhhh
Confidence            8899999987 999999987653     88899999999999999999999999999975

>PRK14879 serine/threonine protein kinase; Provisional

Probab=99.30  E-value=2.3e-11  Score=116.00  Aligned_cols=113  Identities=15%  Similarity=0.115  Sum_probs=92.3

Q ss_pred             EEeccCCceEEEEEEECCCCcEEEEEEEecCh----h-----hHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCE
Q 008813          420 EYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----D-----FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH  490 (552)
Q Consensus       420 e~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk----~-----~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~h  490 (552)
                      +.||+|++|.||+|.+  .+..++||+.....    .     ....+.+|+.++..+.+      ++|+....++.....
T Consensus         2 ~~l~~G~~~~vy~~~~--~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~------~~i~~p~~~~~~~~~   73 (211)
T PRK14879          2 KLIKRGAEAEIYLGDF--LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARK------AGVNVPAVYFVDPEN   73 (211)
T ss_pred             cccccCceEEEEEEee--CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHH------CCCCCCeEEEEeCCC
Confidence            5799999999999987  67789999865421    1     12457789999999998      777777767777788


Q ss_pred             EEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          491 LFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       491 LyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      .++||||+.| +|.+++...         .. ....++.||+.+|.+||+.+|+|.||++-
T Consensus        74 ~~lv~e~~~G~~L~~~~~~~---------~~-~~~~i~~~i~~~l~~lH~~~i~H~Dl~p~  124 (211)
T PRK14879         74 FIIVMEYIEGEPLKDLINSN---------GM-EELELSREIGRLVGKLHSAGIIHGDLTTS  124 (211)
T ss_pred             CEEEEEEeCCcCHHHHHHhc---------cH-HHHHHHHHHHHHHHHHHhCCcccCCCCcc
Confidence            8999999988 999988642         22 77889999999999999999999999863

>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.29  E-value=1.3e-11  Score=138.37  Aligned_cols=133  Identities=20%  Similarity=0.222  Sum_probs=110.1

Q ss_pred             ecCceEEEEEeccCCceEEEEEEEC---C----CCcEEEEEEEecC--hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeE
Q 008813          412 IAGRYYVTEYLGSAAFSKVFQAQDL---H----TGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLY  482 (552)
Q Consensus       412 i~~RY~Ile~LGkG~FG~VykA~Dk---k----tg~~VAVKIIk~s--k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~  482 (552)
                      ...+..+.+.||.|+||+|++|.-.   .    ....||||.++..  ....+.+..|+++|+.+.+|     +||+.|+
T Consensus       294 ~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H-----~niv~ll  368 (609)
T KOG0200|consen  294 PRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKH-----PNIVNLL  368 (609)
T ss_pred             chhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCC-----cchhhhe
Confidence            3345567779999999999999743   1    1467999999864  23457789999999999987     9999999


Q ss_pred             eEEEeCCEEEEEEecCCC-CHHHHHHhhc---------cCCCC-cCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          483 DYFYHLEHLFIVCELLRA-NLYEFQKFNQ---------ESGGE-AYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       483 d~F~~~~hLyIVmEll~G-sL~d~Lk~~~---------~~g~~-~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      +++..++.+++|+||+.. +|..+++.++         ....+ ..++......++.||+.||+||++.++||+||-|
T Consensus       369 G~~t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vHRDLAa  446 (609)
T KOG0200|consen  369 GACTQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVPCVHRDLAA  446 (609)
T ss_pred             eeeccCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCCccchhhhh
Confidence            999999999999999876 9999999877         10000 1388999999999999999999999999999976

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.28  E-value=2.3e-13  Score=138.33  Aligned_cols=118  Identities=22%  Similarity=0.278  Sum_probs=103.9

Q ss_pred             EEeccCCceEEEEEEECCCCcEEEEEEEecChh---hHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeC-----CEE
Q 008813          420 EYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD---FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL-----EHL  491 (552)
Q Consensus       420 e~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~---~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~-----~hL  491 (552)
                      +.||-|+||+||...|.++|+.||+|.+.+-..   ..+.+.+|+++|..++|      .||+..++...-.     ..+
T Consensus        59 RPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkH------dNVLSaLDILQPph~dfFqEi  132 (449)
T KOG0664|consen   59 RPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRH------DNVLSLLDILQPANPSFFQEL  132 (449)
T ss_pred             CcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhcc------ccHHHHHHhcCCCCchHHHHH
Confidence            589999999999999999999999998876422   23678899999999999      8999999887643     348


Q ss_pred             EEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          492 FIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       492 yIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      |+|+|+|..+|..+|-..+.      ++...++-++.||+.||.|||+.+|+|+|+|+
T Consensus       133 YV~TELmQSDLHKIIVSPQ~------Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKP  184 (449)
T KOG0664|consen  133 YVLTELMQSDLHKIIVSPQA------LTPDHVKVFVYQILRGLKYLHTANILHRDIKP  184 (449)
T ss_pred             HHHHHHHHhhhhheeccCCC------CCcchhhhhHHHHHhhhHHHhhcchhhccCCC
Confidence            99999999999999887654      99999999999999999999999999999996

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.28  E-value=4.1e-12  Score=140.07  Aligned_cols=123  Identities=24%  Similarity=0.268  Sum_probs=106.4

Q ss_pred             ecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEE
Q 008813          412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL  491 (552)
Q Consensus       412 i~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hL  491 (552)
                      ....|.+...||.|+|+.|..|.+..+++..++|+|.+..   ....+|+.++....+|     +||+++.+.+....++
T Consensus       320 ~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~---~~~~~e~~~~~~~~~h-----~niv~~~~v~~~~~~~  391 (612)
T KOG0603|consen  320 FTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRA---DDNQDEIPISLLVRDH-----PNIVKSHDVYEDGKEI  391 (612)
T ss_pred             cchhhccccccCCCCccceeeeeccccccchhheeccccc---cccccccchhhhhcCC-----CcceeecceecCCcee
Confidence            3467888889999999999999999999999999998652   3456788888887776     9999999999999999


Q ss_pred             EEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          492 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       492 yIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      |+|||++.| .|.+.+..+..      +. .++..|++||+.|+.|||++||||+|||+
T Consensus       392 ~~v~e~l~g~ell~ri~~~~~------~~-~e~~~w~~~lv~Av~~LH~~gvvhRDLkp  443 (612)
T KOG0603|consen  392 YLVMELLDGGELLRRIRSKPE------FC-SEASQWAAELVSAVDYLHEQGVVHRDLKP  443 (612)
T ss_pred             eeeehhccccHHHHHHHhcch------hH-HHHHHHHHHHHHHHHHHHhcCeeecCCCh
Confidence            999999998 66666665543      34 78889999999999999999999999996

>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]

Probab=99.28  E-value=1.5e-12  Score=132.46  Aligned_cols=126  Identities=15%  Similarity=0.200  Sum_probs=110.5

Q ss_pred             ecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeE-EEeCCE
Q 008813          412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDY-FYHLEH  490 (552)
Q Consensus       412 i~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~-F~~~~h  490 (552)
                      +.+.|.|.+.||+|.||.+.+|.++++...++||.+.........+.+|...--.|.+|     .|||.-|+. |++.+.
T Consensus        22 l~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~tt~~dF~rEfhY~~~Ls~H-----~hIi~tY~vaFqt~d~   96 (378)
T KOG1345|consen   22 LEDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQTTQADFVREFHYSFFLSPH-----QHIIDTYEVAFQTSDA   96 (378)
T ss_pred             hhhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcchhhHHHHHHHhccceeeccc-----hhhhHHHHHHhhcCce
Confidence            44678999999999999999999999999999999987755567788999877778887     899988765 677889


Q ss_pred             EEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          491 LFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       491 LyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      .+++|||++. +|.+-+...+       +-|...+.++.|++.||.|||+++|||+|||.
T Consensus        97 YvF~qE~aP~gdL~snv~~~G-------igE~~~K~v~~ql~SAi~fMHsknlVHRdlK~  149 (378)
T KOG1345|consen   97 YVFVQEFAPRGDLRSNVEAAG-------IGEANTKKVFAQLLSAIEFMHSKNLVHRDLKA  149 (378)
T ss_pred             EEEeeccCccchhhhhcCccc-------ccHHHHHHHHHHHHHHHHHhhccchhhccccc
Confidence            9999999985 9988766533       88999999999999999999999999999996

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=99.26  E-value=5.4e-12  Score=135.51  Aligned_cols=118  Identities=18%  Similarity=0.137  Sum_probs=100.1

Q ss_pred             ceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChhhHHHHHHHHHHHHH--hcccCCCCCCCeeEeEeEEEeCC---
Q 008813          415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKL--VNKNDPADEHHILRLYDYFYHLE---  489 (552)
Q Consensus       415 RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~~~~~~lrEIkILk~--L~hhd~~d~pnIVrL~d~F~~~~---  489 (552)
                      -.++++.||+|.||.||+|+..  ++.||||++...  ..+.++.|-+|...  ++|      +||++++.+-....   
T Consensus       211 pl~l~eli~~Grfg~V~KaqL~--~~~VAVKifp~~--~kqs~~~Ek~Iy~lp~m~h------~nIl~Fi~~ekr~t~~~  280 (534)
T KOG3653|consen  211 PLQLLELIGRGRFGCVWKAQLD--NRLVAVKIFPEQ--EKQSFQNEKNIYSLPGMKH------ENILQFIGAEKRGTADR  280 (534)
T ss_pred             chhhHHHhhcCccceeehhhcc--CceeEEEecCHH--HHHHHHhHHHHHhccCccc------hhHHHhhchhccCCccc
Confidence            4567789999999999999864  589999999843  34678888888877  455      99999998876554   


Q ss_pred             -EEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhC---------CCeeeeccc
Q 008813          490 -HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLL---------LVIYFILFC  549 (552)
Q Consensus       490 -hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~---------gIIH~~L~~  549 (552)
                       .++||+||... +|.++|+.+.       +++.....|+.-|++||+|||.-         .|+|+|||.
T Consensus       281 ~eywLVt~fh~kGsL~dyL~~nt-------isw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkS  344 (534)
T KOG3653|consen  281 MEYWLVTEFHPKGSLCDYLKANT-------ISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKS  344 (534)
T ss_pred             cceeEEeeeccCCcHHHHHHhcc-------ccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccc
Confidence             79999999875 9999999876       89999999999999999999942         599999984

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=99.26  E-value=1.5e-10  Score=108.92  Aligned_cols=123  Identities=23%  Similarity=0.315  Sum_probs=105.4

Q ss_pred             eEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChh----hHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEE
Q 008813          416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD----FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL  491 (552)
Q Consensus       416 Y~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~----~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hL  491 (552)
                      |.+...||.|+||.||++.+.   ..+++|++.....    ....+.+|+.++..+.++     ++|+++++.+......
T Consensus         2 ~~~~~~l~~g~~~~v~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~-----~~i~~~~~~~~~~~~~   73 (384)
T COG0515           2 YRILRKLGEGSFGEVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASLNHP-----PNIVKLYDFFQDEGSL   73 (384)
T ss_pred             ceeEEeecCCCCeEEEEEEec---cEEEEEeechhhccchhHHHHHHHHHHHHHHccCC-----cceeeEEEEEecCCEE
Confidence            788899999999999999987   7889999876422    356788999999999983     3899999999888889


Q ss_pred             EEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          492 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       492 yIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      +++++++.+ +|.++++.....   ..++...+..++.|++.+|.|+|+.+++|+|||+
T Consensus        74 ~~~~~~~~~~~l~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd~kp  129 (384)
T COG0515          74 YLVMEYVDGGSLEDLLKKIGRK---GPLSESEALFILAQILSALEYLHSKGIIHRDIKP  129 (384)
T ss_pred             EEEEecCCCCcHHHHHHhcccc---cCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCH
Confidence            999999987 888777755321   1289999999999999999999999999999984

>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]

Probab=99.22  E-value=1e-11  Score=128.36  Aligned_cols=124  Identities=23%  Similarity=0.265  Sum_probs=108.3

Q ss_pred             eecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC---hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEe
Q 008813          411 VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH  487 (552)
Q Consensus       411 vi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s---k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~  487 (552)
                      .+..||.-+..+|.|+- .|..|.|.-+++.||+|.+...   ....+++.+|.+++..++|      +|||+++.+|.-
T Consensus        14 tv~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~------~nii~l~n~ftP   86 (369)
T KOG0665|consen   14 TVPKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNH------KNIISLLNVFTP   86 (369)
T ss_pred             eeeeeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcc------cceeeeeeccCc
Confidence            34579999999999997 7888999999999999987653   2234678899999999999      999999999986


Q ss_pred             CC------EEEEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          488 LE------HLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       488 ~~------hLyIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      +.      .+|+|||+|..+|.+++...        +.-..++.|+.|++.|++|||+.||||+|||+
T Consensus        87 ~~~l~~~~e~y~v~e~m~~nl~~vi~~e--------lDH~tis~i~yq~~~~ik~lhs~~IihRdLkP  146 (369)
T KOG0665|consen   87 QKTLEEFQEVYLVMELMDANLCQVILME--------LDHETISYILYQMLCGIKHLHSAGIIHRDLKP  146 (369)
T ss_pred             cccHHHHHhHHHHHHhhhhHHHHHHHHh--------cchHHHHHHHHHHHHHHHHHHhcceeecccCc
Confidence            64      48999999999999998832        67889999999999999999999999999997

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=99.20  E-value=2.2e-11  Score=120.19  Aligned_cols=129  Identities=17%  Similarity=0.201  Sum_probs=107.2

Q ss_pred             CceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC--hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEE
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL  491 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s--k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hL  491 (552)
                      +....+..||+|+||+|=+-++..+|...|+|.++..  .+..++.++|+.+.++-.     ++|.+|++|+.+.....+
T Consensus        46 d~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~-----~CPf~V~FyGa~~regdv  120 (282)
T KOG0984|consen   46 DDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTV-----DCPFTVHFYGALFREGDV  120 (282)
T ss_pred             hhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCC-----CCCeEEEeehhhhccccE
Confidence            4455567899999999999999999999999999753  233456777887765544     459999999999999999


Q ss_pred             EEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhC-CCeeeeccc
Q 008813          492 FIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLL-LVIYFILFC  549 (552)
Q Consensus       492 yIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~-gIIH~~L~~  549 (552)
                      ||.||.|..+|..+.+.--.+++  .++|..+-.|+..|+.||.|||++ .|||+|+|+
T Consensus       121 wIcME~M~tSldkfy~~v~~~g~--~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKP  177 (282)
T KOG0984|consen  121 WICMELMDTSLDKFYRKVLKKGG--TIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKP  177 (282)
T ss_pred             EEeHHHhhhhHHHHHHHHHhcCC--cCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCc
Confidence            99999999998888765444443  289999999999999999999954 899999986

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=99.19  E-value=1e-10  Score=110.73  Aligned_cols=108  Identities=13%  Similarity=0.032  Sum_probs=83.3

Q ss_pred             EeccCCceEEEEEEECCCCcEEEEEEEecCh----h-----hHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEE
Q 008813          421 YLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----D-----FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL  491 (552)
Q Consensus       421 ~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk----~-----~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hL  491 (552)
                      .||+|+||.||++..  .++.|++|+.....    .     ....+.+|++++..+.+      ++|....-++......
T Consensus         1 ~ig~G~~~~vy~~~~--~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~------~~i~~p~~~~~~~~~~   72 (199)
T TIGR03724         1 LIAKGAEAIIYLGDF--LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARK------AGVNTPVVYDVDPDNK   72 (199)
T ss_pred             CCCCCceEEEEEeec--CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHH------CCCCCCEEEEEECCCC
Confidence            489999999999984  56789999865321    1     12556789999999987      5544444444556667


Q ss_pred             EEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          492 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       492 yIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      +|||||+.| +|.+++....       .      .++.|++.+|.+||+.||+|.||++
T Consensus        73 ~lv~e~~~g~~l~~~~~~~~-------~------~~~~~i~~~l~~lH~~gi~H~Dl~~  118 (199)
T TIGR03724        73 TIVMEYIEGKPLKDVIEEGN-------D------ELLREIGRLVGKLHKAGIVHGDLTT  118 (199)
T ss_pred             EEEEEEECCccHHHHHhhcH-------H------HHHHHHHHHHHHHHHCCeecCCCCc
Confidence            999999987 8988765421       1      7899999999999999999999986

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]

Probab=99.17  E-value=3.1e-11  Score=136.32  Aligned_cols=119  Identities=21%  Similarity=0.226  Sum_probs=98.5

Q ss_pred             EEEeccCCceE-EEEEEECCCCcEEEEEEEecChhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEEEEEEec
Q 008813          419 TEYLGSAAFSK-VFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCEL  497 (552)
Q Consensus       419 le~LGkG~FG~-VykA~Dkktg~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hLyIVmEl  497 (552)
                      .+++|.|+-|. ||+|..  .++.||||.+-  ..+.+.+.|||..|+.-..|     ||||++|..-.++.++||..|+
T Consensus       514 ~eilG~Gs~Gt~Vf~G~y--e~R~VAVKrll--~e~~~~A~rEi~lL~eSD~H-----~NviRyyc~E~d~qF~YIalEL  584 (903)
T KOG1027|consen  514 KEILGYGSNGTVVFRGVY--EGREVAVKRLL--EEFFDFAQREIQLLQESDEH-----PNVIRYYCSEQDRQFLYIALEL  584 (903)
T ss_pred             HHHcccCCCCcEEEEEee--CCceehHHHHh--hHhHHHHHHHHHHHHhccCC-----CceEEEEeeccCCceEEEEehH
Confidence            45689998886 789987  47899999775  34567889999999988766     9999999999999999999999


Q ss_pred             CCCCHHHHHHhhccCCCCcCCCH-HHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          498 LRANLYEFQKFNQESGGEAYFTL-GRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       498 l~GsL~d~Lk~~~~~g~~~pLSe-~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      |..+|.++++.....   ..... -..+.+..|++.||++||+.+|||+|||+
T Consensus       585 C~~sL~dlie~~~~d---~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLkP  634 (903)
T KOG1027|consen  585 CACSLQDLIESSGLD---VEMQSDIDPISVLSQIASGLAHLHSLKIVHRDLKP  634 (903)
T ss_pred             hhhhHHHHHhccccc---hhhcccccHHHHHHHHHHHHHHHHhcccccccCCC
Confidence            999999999974110   00111 45678899999999999999999999997

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=99.17  E-value=2.8e-11  Score=123.42  Aligned_cols=124  Identities=18%  Similarity=0.134  Sum_probs=107.9

Q ss_pred             eEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC--hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEEEE
Q 008813          416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFI  493 (552)
Q Consensus       416 Y~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s--k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hLyI  493 (552)
                      .+.+..||.|+-|+||+++.+.++...|||.+++.  +...+++++.+.++..-+     |+|.||+.+++|.....++|
T Consensus        94 l~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~-----dcpyIV~c~GyFi~n~dV~I  168 (391)
T KOG0983|consen   94 LENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSH-----DCPYIVQCFGYFITNTDVFI  168 (391)
T ss_pred             hhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhcc-----CCCeeeeeeeEEeeCchHHH
Confidence            55677899999999999999999999999999874  445677888888776544     34999999999999999999


Q ss_pred             EEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHH-hCCCeeeeccc
Q 008813          494 VCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIF-LLLVIYFILFC  549 (552)
Q Consensus       494 VmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLH-s~gIIH~~L~~  549 (552)
                      .||+|...+..++++.+.     |++|..+-.+...++.||.||. .++|||+|+|+
T Consensus       169 cMelMs~C~ekLlkrik~-----piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKP  220 (391)
T KOG0983|consen  169 CMELMSTCAEKLLKRIKG-----PIPERILGKMTVAIVKALYYLKEKHGVIHRDVKP  220 (391)
T ss_pred             HHHHHHHHHHHHHHHhcC-----CchHHhhhhhHHHHHHHHHHHHHhcceeecccCc
Confidence            999999988888887664     3899999999999999999998 55899999986

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=99.16  E-value=9.2e-12  Score=126.41  Aligned_cols=126  Identities=17%  Similarity=0.129  Sum_probs=105.0

Q ss_pred             ceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC--hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEEE
Q 008813          415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLF  492 (552)
Q Consensus       415 RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s--k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hLy  492 (552)
                      ..+-+..||.|+||.|++-.++.+|+.+|||.|+..  ....++++.|....++-...     |+||++|++....+..|
T Consensus        65 ~Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~c-----p~IVkfyGa~F~EGdcW  139 (361)
T KOG1006|consen   65 NLQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNC-----PNIVKFYGALFSEGDCW  139 (361)
T ss_pred             hHHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCC-----cHHHHHhhhhhcCCcee
Confidence            344567899999999999999999999999999864  23456788888887776654     99999999999999999


Q ss_pred             EEEecCCCCHHHHHH---hhccCCCCcCCCHHHHHHHHHHHHHHHHHHH-hCCCeeeeccc
Q 008813          493 IVCELLRANLYEFQK---FNQESGGEAYFTLGRLQVCSTFLLTLLMLIF-LLLVIYFILFC  549 (552)
Q Consensus       493 IVmEll~GsL~d~Lk---~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLH-s~gIIH~~L~~  549 (552)
                      |-||+|+-+|..+.+   ..+...    ++|+-+-.|+...+.||.||. .++|||+|+|+
T Consensus       140 iCMELMd~SlDklYk~vy~vq~~~----ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKP  196 (361)
T KOG1006|consen  140 ICMELMDISLDKLYKRVYSVQKSR----IPENILGHITVATVDALDYLKEELKIIHRDVKP  196 (361)
T ss_pred             eeHHHHhhhHHHHHHHHHHHHhcc----CcHhhhhheeeeehhHHHHHHHHhhhhhccCCh
Confidence            999999986655544   333322    899999999999999999998 56899999986

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=99.15  E-value=2.3e-10  Score=126.09  Aligned_cols=114  Identities=14%  Similarity=0.025  Sum_probs=89.3

Q ss_pred             CceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC----h-----hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeE
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND----K-----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDY  484 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s----k-----~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~  484 (552)
                      .+|...+.||+|+||.||++.+...  .+++|+....    +     .....+.+|+++++.+++      ++|+..+.+
T Consensus       333 ~~~~~~~~iG~G~~g~Vy~~~~~~~--~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~------~~i~~p~~~  404 (535)
T PRK09605        333 RRKIPDHLIGKGAEADIKKGEYLGR--DAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARR------AGVPTPVIY  404 (535)
T ss_pred             cccCccceeccCCcEEEEEEeecCc--cceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcc------cCCCeeEEE
Confidence            4556678999999999999987543  3444432111    1     123467899999999998      888887777


Q ss_pred             EEeCCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          485 FYHLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       485 F~~~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      +......+|||||+.+ +|.+++..              ...++.|++.+|.+||+++|||+|||+
T Consensus       405 ~~~~~~~~lv~E~~~g~~L~~~l~~--------------~~~~~~~i~~~L~~lH~~giiHrDlkp  456 (535)
T PRK09605        405 DVDPEEKTIVMEYIGGKDLKDVLEG--------------NPELVRKVGEIVAKLHKAGIVHGDLTT  456 (535)
T ss_pred             EEeCCCCEEEEEecCCCcHHHHHHH--------------HHHHHHHHHHHHHHHHhCCCccCCCCh
Confidence            7777778999999988 89887752              356899999999999999999999996

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=99.14  E-value=1.9e-10  Score=109.97  Aligned_cols=112  Identities=19%  Similarity=0.154  Sum_probs=85.6

Q ss_pred             eEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChh-----------------------hHHHHHHHHHHHHHhcccCC
Q 008813          416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD-----------------------FFDQSLDEIKLLKLVNKNDP  472 (552)
Q Consensus       416 Y~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~-----------------------~~~~~lrEIkILk~L~hhd~  472 (552)
                      |.+.+.||+|+||.||++... +++.||||+++....                       ......+|+.++..+.+   
T Consensus        17 ~~~~~~i~~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~---   92 (198)
T cd05144          17 ESLGNQIGVGKESDVYLALDP-DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYE---   92 (198)
T ss_pred             hhcCCccccCcceEEEEEEcC-CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHH---
Confidence            778899999999999999875 799999999875320                       01236789999999977   


Q ss_pred             CCCC--CeeEeEeEEEeCCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          473 ADEH--HILRLYDYFYHLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       473 ~d~p--nIVrL~d~F~~~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                         +  .++..++    ....++||||+.+ +|..+...            ..+..++.||+.+|.++|+.||+|.||++
T Consensus        93 ---~~i~v~~~~~----~~~~~lv~e~~~g~~L~~~~~~------------~~~~~~~~~i~~~l~~lh~~gi~H~Dl~p  153 (198)
T cd05144          93 ---EGFPVPKPID----WNRHAVVMEYIDGVELYRVRVL------------EDPEEVLDEILEEIVKAYKHGIIHGDLSE  153 (198)
T ss_pred             ---cCCCCCceee----cCCceEEEEEeCCcchhhcccc------------ccHHHHHHHHHHHHHHHHHCCCCcCCCCc
Confidence               4  4445443    2345899999998 77654221            23567889999999999999999999987


Q ss_pred             c
Q 008813          550 F  550 (552)
Q Consensus       550 ~  550 (552)
                      -
T Consensus       154 ~  154 (198)
T cd05144         154 F  154 (198)
T ss_pred             c
Confidence            4

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>PRK12274 serine/threonine protein kinase; Provisional

Probab=99.10  E-value=5.6e-10  Score=110.89  Aligned_cols=109  Identities=15%  Similarity=0.057  Sum_probs=84.0

Q ss_pred             EEEEEeccCCceEEEEEEECCCCcEEEEEEEecChhhHH-----HHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEE
Q 008813          417 YVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFD-----QSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL  491 (552)
Q Consensus       417 ~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~~~~-----~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hL  491 (552)
                      .+...|++|+||+|+++..  .+..++.+.+........     .+.+|+++|++|.++     ++|++++++    +..
T Consensus         5 ~~~~~l~~~~f~~v~~~~~--~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~-----~~vP~ll~~----~~~   73 (218)
T PRK12274          5 AVNEPLKSDTFGRILLVRG--GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGL-----PRTPRLLHW----DGR   73 (218)
T ss_pred             ccceeecCCCcceEEEeec--CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCC-----CCCCEEEEE----cCE
Confidence            3567899999999997755  567777666665433222     578999999999875     889999886    447


Q ss_pred             EEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeec-cc
Q 008813          492 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFIL-FC  549 (552)
Q Consensus       492 yIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L-~~  549 (552)
                      |++|||+.| +|.+.+..            . ...++.|++.+|.+||++||||+|| |+
T Consensus        74 ~lvmeyI~G~~L~~~~~~------------~-~~~~~~qi~~~L~~lH~~GIvHrDL~kp  120 (218)
T PRK12274         74 HLDRSYLAGAAMYQRPPR------------G-DLAYFRAARRLLQQLHRCGVAHNDLAKE  120 (218)
T ss_pred             EEEEeeecCccHHhhhhh------------h-hHHHHHHHHHHHHHHHHCcCccCCCCCc
Confidence            999999988 77643211            1 1357889999999999999999999 65

>cd05119 RIO RIO kinase family, catalytic domain

Probab=99.06  E-value=4.4e-10  Score=105.19  Aligned_cols=115  Identities=16%  Similarity=0.121  Sum_probs=80.2

Q ss_pred             EEEeccCCceEEEEEEECCCCcEEEEEEEecChhh---HH----------------------HHHHHHHHHHHhcccCCC
Q 008813          419 TEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDF---FD----------------------QSLDEIKLLKLVNKNDPA  473 (552)
Q Consensus       419 le~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~~---~~----------------------~~lrEIkILk~L~hhd~~  473 (552)
                      .+.||+|+||+||+|.+. +++.||||+++.....   ..                      ....|...+..+.+.   
T Consensus         2 ~~~lg~G~~g~Vy~a~~~-~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~---   77 (187)
T cd05119           2 GGPIGTGKEADVYLALDG-DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEA---   77 (187)
T ss_pred             CcccccccceeEEEEECC-CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHc---
Confidence            467999999999999886 7899999998763210   01                      113577777777652   


Q ss_pred             CCCCeeEeEeEEEeCCEEEEEEecCCC-CH-HHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHh-CCCeeeecccc
Q 008813          474 DEHHILRLYDYFYHLEHLFIVCELLRA-NL-YEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFL-LLVIYFILFCF  550 (552)
Q Consensus       474 d~pnIVrL~d~F~~~~hLyIVmEll~G-sL-~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs-~gIIH~~L~~~  550 (552)
                       ...+++.+.+    ...+|||||+.+ .+ ...+....       .. ..++.++.|++.+|.++|. ++|+|+||++=
T Consensus        78 -~~~~~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~-------~~-~~~~~~~~~~~~~l~~lh~~~~ivH~Dl~p~  144 (187)
T cd05119          78 -GVPVPKPIDL----NRHVLVMEFIGGDGIPAPRLKDVR-------LL-EDPEELYDQILELMRKLYREAGLVHGDLSEY  144 (187)
T ss_pred             -CCCCCceEec----CCCEEEEEEeCCCCccChhhhhhh-------hc-ccHHHHHHHHHHHHHHHhhccCcCcCCCChh
Confidence             0124444443    236999999987 32 22233211       11 5678999999999999999 99999999863

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=98.98  E-value=3.5e-09  Score=92.39  Aligned_cols=113  Identities=15%  Similarity=0.092  Sum_probs=91.0

Q ss_pred             EEEEeccCCceEEEEEEECCCCcEEEEEEEecChhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEEEEEEec
Q 008813          418 VTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCEL  497 (552)
Q Consensus       418 Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hLyIVmEl  497 (552)
                      +++.||.|.++.||++....  ..++||+.+.... ...+.+|+.+++.+.++    ..++++++.++..++..+++||+
T Consensus         2 ~~~~i~~g~~~~v~~~~~~~--~~~~iK~~~~~~~-~~~~~~e~~~~~~l~~~----~~~~p~~~~~~~~~~~~~~v~e~   74 (155)
T cd05120           2 SIKLLKGGLTNRVYLLGTKD--EDYVLKINPSREK-GADREREVAILQLLARK----GLPVPKVLASGESDGWSYLLMEW   74 (155)
T ss_pred             cceecccccccceEEEEecC--CeEEEEecCCCCc-hhHHHHHHHHHHHHHHc----CCCCCeEEEEcCCCCccEEEEEe
Confidence            45789999999999999754  6799999876533 45688999999999872    24888998888888889999999


Q ss_pred             CCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhC---CCeeeecccc
Q 008813          498 LRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLL---LVIYFILFCF  550 (552)
Q Consensus       498 l~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~---gIIH~~L~~~  550 (552)
                      +.+ .+..+             +......++.+++.+|.+||..   +|+|.||++-
T Consensus        75 ~~g~~~~~~-------------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~  118 (155)
T cd05120          75 IEGETLDEV-------------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPG  118 (155)
T ss_pred             cCCeecccC-------------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcc
Confidence            987 45433             2345567889999999999985   6999999863

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=98.86  E-value=2.6e-09  Score=124.43  Aligned_cols=127  Identities=14%  Similarity=0.166  Sum_probs=98.4

Q ss_pred             eecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCE
Q 008813          411 VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH  490 (552)
Q Consensus       411 vi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~h  490 (552)
                      +-...|.|-+.||+|+||+||+|.... ++.||||+-+..-.+  .+-.=.+++.+|+   +.-.+.|..+..+....+.
T Consensus       695 ~~~~~~~I~~e~G~g~y~~vy~a~~~~-~~~~alK~e~P~~~W--EfYI~~q~~~RLk---~~~~~~~~~~~~a~~~~~~  768 (974)
T KOG1166|consen  695 VGGEKFCISKEIGEGSYGSVYVATHSN-GKLVALKVEKPPNPW--EFYICLQVMERLK---PQMLPSIMHISSAHVFQNA  768 (974)
T ss_pred             ecceeEEEEeeeccccceEEEEeecCC-CcEEEEEeecCCCce--eeeehHHHHHhhc---hhhhcchHHHHHHHccCCc
Confidence            334679999999999999999999887 999999998753110  0000112233333   0011577788888888888


Q ss_pred             EEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          491 LFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       491 LyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      -+||+||... +|.+++...+.      +++..+..|+.||+..++.||..+|||-|||+
T Consensus       769 S~lv~ey~~~Gtlld~~N~~~~------m~e~lv~~~~~qml~ive~lH~~~IIHgDiKP  822 (974)
T KOG1166|consen  769 SVLVSEYSPYGTLLDLINTNKV------MDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKP  822 (974)
T ss_pred             ceeeeeccccccHHHhhccCCC------CCchhhhHHHHHHHHHHHHHHhcceecccCCc
Confidence            9999999885 99999984432      89999999999999999999999999999997

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=98.80  E-value=4.4e-08  Score=97.88  Aligned_cols=111  Identities=14%  Similarity=0.029  Sum_probs=80.4

Q ss_pred             Eec-cCCceEEEEEEECCCCcEEEEEEEecCh--------------hhHHHHHHHHHHHHHhcccCCCCCCC--eeEeEe
Q 008813          421 YLG-SAAFSKVFQAQDLHTGVDVCLKIIKNDK--------------DFFDQSLDEIKLLKLVNKNDPADEHH--ILRLYD  483 (552)
Q Consensus       421 ~LG-kG~FG~VykA~Dkktg~~VAVKIIk~sk--------------~~~~~~lrEIkILk~L~hhd~~d~pn--IVrL~d  483 (552)
                      .|| .|+.|.||.+...  +..++||.+....              .....+.+|+.++..|.+      ++  +++.+.
T Consensus        38 ~lg~~~g~gtv~~v~~~--~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~------~gi~vP~pl~  109 (239)
T PRK01723         38 VVGSAKGRGTTWFVQTP--GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYE------AGLPVPRPIA  109 (239)
T ss_pred             eeecCCCCccEEEEEeC--CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHh------CCCCCceeEe
Confidence            455 6777777777653  6788999875321              112467889999999998      55  467776


Q ss_pred             EEEeCC----EEEEEEecCCC--CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          484 YFYHLE----HLFIVCELLRA--NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       484 ~F~~~~----hLyIVmEll~G--sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      +.....    ..+||||++.+  +|.+++....       +++.    .+.||+.+|.+||++||+|.||++-
T Consensus       110 ~~~~~~~~~~~~~lV~e~l~G~~~L~~~l~~~~-------l~~~----~~~~i~~~l~~lH~~GI~HrDlkp~  171 (239)
T PRK01723        110 ARVVRHGLFYRADILIERIEGARDLVALLQEAP-------LSEE----QWQAIGQLIARFHDAGVYHADLNAH  171 (239)
T ss_pred             eeeeecCcceeeeEEEEecCCCCCHHHHHhcCC-------CCHH----HHHHHHHHHHHHHHCCCCCCCCCch
Confidence            654332    23699999986  8988876421       5554    3578999999999999999999974

>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]

Probab=98.45  E-value=2.1e-07  Score=99.09  Aligned_cols=132  Identities=15%  Similarity=0.091  Sum_probs=101.7

Q ss_pred             ecCceEEEEEeccCCceEEEEEEECCC-----CcEEEEEEEecC--hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeE
Q 008813          412 IAGRYYVTEYLGSAAFSKVFQAQDLHT-----GVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDY  484 (552)
Q Consensus       412 i~~RY~Ile~LGkG~FG~VykA~Dkkt-----g~~VAVKIIk~s--k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~  484 (552)
                      -..|+++...+-+|.||+||.|.++..     .+.|-+|.++..  +.....++.|..+|..+.|      ||+..+.+.
T Consensus       282 ~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH------~nll~V~~V  355 (563)
T KOG1024|consen  282 QRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASH------PNLLSVLGV  355 (563)
T ss_pred             hhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcC------CCccceeEE
Confidence            346788888999999999999976532     244556666543  3345677888888888887      999999998


Q ss_pred             EEeC-CEEEEEEecCCC-CHHHHHHhhccC--CCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          485 FYHL-EHLFIVCELLRA-NLYEFQKFNQES--GGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       485 F~~~-~hLyIVmEll~G-sL~d~Lk~~~~~--g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      .... ...+.++.+++- +|..||+.++..  .....++..++..++.|+..||.|||++||||.||-+
T Consensus       356 ~ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDiAa  424 (563)
T KOG1024|consen  356 SIEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIAA  424 (563)
T ss_pred             EeeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCcccchhhh
Confidence            8755 556777788774 999999855421  1223477888889999999999999999999999854

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=98.35  E-value=3.4e-06  Score=82.89  Aligned_cols=116  Identities=11%  Similarity=0.031  Sum_probs=83.5

Q ss_pred             EEeccCCceEEEEEEECC------CCcEEEEEEEecC-------h-------h---------hHH----HHHHHHHHHHH
Q 008813          420 EYLGSAAFSKVFQAQDLH------TGVDVCLKIIKND-------K-------D---------FFD----QSLDEIKLLKL  466 (552)
Q Consensus       420 e~LGkG~FG~VykA~Dkk------tg~~VAVKIIk~s-------k-------~---------~~~----~~lrEIkILk~  466 (552)
                      ..||.|.=+.||.|....      .+..+|||+.+..       .       .         .++    .+.+|++.|++
T Consensus         3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r   82 (197)
T cd05146           3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR   82 (197)
T ss_pred             CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence            468999999999998653      3578999998642       0       0         011    24489999999


Q ss_pred             hcccCCCCCCCeeEeEeEEEeCCEEEEEEecCCC-CHH-HHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHH-HhCCCe
Q 008813          467 VNKNDPADEHHILRLYDYFYHLEHLFIVCELLRA-NLY-EFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLI-FLLLVI  543 (552)
Q Consensus       467 L~hhd~~d~pnIVrL~d~F~~~~hLyIVmEll~G-sL~-d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YL-Hs~gII  543 (552)
                      +...    .-.+++.+++    ..-+|||||+++ .+. ..++..       .+++..+..+..|++.+|..| |+.|||
T Consensus        83 l~~~----Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd~-------~~~~~~~~~i~~~i~~~l~~l~H~~glV  147 (197)
T cd05146          83 MQKA----GIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKDA-------KLNDEEMKNAYYQVLSMMKQLYKECNLV  147 (197)
T ss_pred             HHHc----CCCCCeEEEe----cCCEEEEEEcCCCCccchhhhcc-------ccCHHHHHHHHHHHHHHHHHHHHhCCee
Confidence            9872    1456666654    446899999987 332 223321       156677788899999999999 899999


Q ss_pred             eeecccc
Q 008813          544 YFILFCF  550 (552)
Q Consensus       544 H~~L~~~  550 (552)
                      |.||..+
T Consensus       148 HGDLs~~  154 (197)
T cd05146         148 HADLSEY  154 (197)
T ss_pred             cCCCCHH
Confidence            9999864

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>cd05151 ChoK Choline Kinase (ChoK)

Probab=98.35  E-value=1.7e-06  Score=79.34  Aligned_cols=109  Identities=15%  Similarity=0.067  Sum_probs=78.8

Q ss_pred             EEEeccCCceEEEEEEECCCCcEEEEEEEecChhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEEEEEEecC
Q 008813          419 TEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCELL  498 (552)
Q Consensus       419 le~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hLyIVmEll  498 (552)
                      ++.|+.|.++.||++...  ++.|+||+............+|+++++.+.+.     ..+++++....  ..-++|||++
T Consensus         3 ~~~l~~G~~~~vy~~~~~--~~~~~lK~~~~~~~~~~~~~~E~~~l~~l~~~-----~~~P~~~~~~~--~~~~lv~e~i   73 (170)
T cd05151           3 ISPLKGGMTNKNYRVEVA--NKKYVVRIPGNGTELLINRENEAENSKLAAEA-----GIGPKLYYFDP--ETGVLITEFI   73 (170)
T ss_pred             eeecCCcccCceEEEEEC--CeEEEEEeCCCCcccccCHHHHHHHHHHHHHh-----CCCCceEEEeC--CCCeEEEEec
Confidence            467899999999999864  77899999866532223457899999999863     23455655443  3347999999


Q ss_pred             CC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCC-----eeeecccc
Q 008813          499 RA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLV-----IYFILFCF  550 (552)
Q Consensus       499 ~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gI-----IH~~L~~~  550 (552)
                      .| ++...    .       ..   ...++.|++.+|..||+.++     +|.||+..
T Consensus        74 ~G~~l~~~----~-------~~---~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~  117 (170)
T cd05151          74 EGSELLTE----D-------FS---DPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPG  117 (170)
T ss_pred             CCCccccc----c-------cc---CHHHHHHHHHHHHHHhCCCCCCceeecCCCCcC
Confidence            98 55432    0       11   13456899999999999985     99999864

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=98.32  E-value=6.2e-07  Score=99.93  Aligned_cols=124  Identities=15%  Similarity=0.155  Sum_probs=75.1

Q ss_pred             CceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecCh-----------------------------------hhHHHH-
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK-----------------------------------DFFDQS-  457 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk-----------------------------------~~~~~~-  457 (552)
                      ..|.. +.||.|++|+||+|+.+.+|+.||||+++..-                                   .+.+.+ 
T Consensus       120 ~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~  198 (537)
T PRK04750        120 DDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLH  198 (537)
T ss_pred             HhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHH
Confidence            34665 68999999999999998889999999997541                                   111222 


Q ss_pred             -----HHHHHHHHHhcccCCCCCCCeeEeEeEEE-eCCEEEEEEecCCC-CHHHHH--HhhccCCCCcCCCHHHHHHHHH
Q 008813          458 -----LDEIKLLKLVNKNDPADEHHILRLYDYFY-HLEHLFIVCELLRA-NLYEFQ--KFNQESGGEAYFTLGRLQVCST  528 (552)
Q Consensus       458 -----lrEIkILk~L~hhd~~d~pnIVrL~d~F~-~~~hLyIVmEll~G-sL~d~L--k~~~~~g~~~pLSe~~I~~Ia~  528 (552)
                           .+|+..+.++..+-. + ...+.+-..+. .....+|||||+.| .|.++.  +..+.  ....+.+..+..++.
T Consensus       199 ~ElD~~~Ea~N~~~~~~~f~-~-~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~--d~~~la~~~v~~~~~  274 (537)
T PRK04750        199 DELDLMREAANASQLRRNFE-D-SDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGT--DMKLLAERGVEVFFT  274 (537)
T ss_pred             HhhCHHHHHHHHHHHHHHcc-C-CCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCC--CHHHHHHHHHHHHHH
Confidence                 334444444432100 1 12222222222 23456899999998 787642  22211  001145555666666


Q ss_pred             HHHHHHHHHHhCCCeeeeccc
Q 008813          529 FLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       529 QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ||+       ..|++|.|+++
T Consensus       275 Qif-------~~GffHaDpHP  288 (537)
T PRK04750        275 QVF-------RDGFFHADMHP  288 (537)
T ss_pred             HHH-------hCCeeeCCCCh
Confidence            654       58999999986

>PLN00181 protein SPA1-RELATED; Provisional

Probab=98.32  E-value=2.1e-07  Score=107.28  Aligned_cols=69  Identities=4%  Similarity=-0.105  Sum_probs=57.6

Q ss_pred             CCeeEeEeEE-------EeCCEEEEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecc
Q 008813          476 HHILRLYDYF-------YHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILF  548 (552)
Q Consensus       476 pnIVrL~d~F-------~~~~hLyIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~  548 (552)
                      +||.+++++|       .....++++||+++++|+++|.....     ++++..++.|++||+.||.|||++||||+|||
T Consensus        33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~L~~~l~~~~~-----~~~~~~~~~i~~qi~~al~~lH~~gIvHrDlK  107 (793)
T PLN00181         33 DYVRSLLGSHKEGNLDGLDDDSIVRALECEDVSLRQWLDNPDR-----SVDAFECFHVFRQIVEIVNAAHSQGIVVHNVR  107 (793)
T ss_pred             HHHHHhhcccCCccccccccchhhhhhccCCccHHHHHhcccc-----cccHHHHHHHHHHHHHHHHHHHhCCeeeccCC
Confidence            4666777776       23346888899998899999975432     28999999999999999999999999999999


Q ss_pred             c
Q 008813          549 C  549 (552)
Q Consensus       549 ~  549 (552)
                      +
T Consensus       108 P  108 (793)
T PLN00181        108 P  108 (793)
T ss_pred             c
Confidence            7

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=98.28  E-value=3.1e-06  Score=92.03  Aligned_cols=119  Identities=13%  Similarity=0.136  Sum_probs=75.0

Q ss_pred             EEeccCCceEEEEEEECCCCcEEEEEEEecChh--h---------------------------------HH------HHH
Q 008813          420 EYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD--F---------------------------------FD------QSL  458 (552)
Q Consensus       420 e~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~--~---------------------------------~~------~~l  458 (552)
                      +.||.|++|+||+|+.+ +|+.||||+.+..-.  .                                 ..      .+.
T Consensus       123 ~plasaSigQVh~A~l~-~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~  201 (437)
T TIGR01982       123 KPLAAASIAQVHRARLV-DGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLR  201 (437)
T ss_pred             cceeeeehhheEEEEec-CCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHH
Confidence            46999999999999864 789999999875310  0                                 00      123


Q ss_pred             HHHHHHHHhcccCCCCCCC--eeEeEeEEEeCCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHH-HH
Q 008813          459 DEIKLLKLVNKNDPADEHH--ILRLYDYFYHLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLT-LL  534 (552)
Q Consensus       459 rEIkILk~L~hhd~~d~pn--IVrL~d~F~~~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~-AL  534 (552)
                      +|.+.+.++... -.+.++  |++++.  ......+|||||+.| +|.++...... +    +.   ...++.+++. .+
T Consensus       202 ~Ea~n~~~~~~~-~~~~~~v~vP~v~~--~~~~~~vLvmE~i~G~~L~~~~~~~~~-~----~~---~~~ia~~~~~~~l  270 (437)
T TIGR01982       202 REAANASELGEN-FKNDPGVYVPEVYW--DRTSERVLTMEWIDGIPLSDIAALDEA-G----LD---RKALAENLARSFL  270 (437)
T ss_pred             HHHHHHHHHHHh-cCCCCCEEeCCEeh--hhcCCceEEEEeECCcccccHHHHHhc-C----CC---HHHHHHHHHHHHH
Confidence            455555555421 011133  333332  223446999999988 88887654321 1    22   2345666665 47


Q ss_pred             HHHHhCCCeeeecccc
Q 008813          535 MLIFLLLVIYFILFCF  550 (552)
Q Consensus       535 ~YLHs~gIIH~~L~~~  550 (552)
                      ..+|..|++|.|+++-
T Consensus       271 ~ql~~~g~~H~D~hPg  286 (437)
T TIGR01982       271 NQVLRDGFFHADLHPG  286 (437)
T ss_pred             HHHHhCCceeCCCCcc
Confidence            7899999999999874

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=98.27  E-value=3e-07  Score=103.61  Aligned_cols=124  Identities=15%  Similarity=0.080  Sum_probs=96.0

Q ss_pred             Cce-EEEEEeccCCceEEEEEEECCCCcEEEEEEEe----cC---hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEE
Q 008813          414 GRY-YVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIK----ND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYF  485 (552)
Q Consensus       414 ~RY-~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk----~s---k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F  485 (552)
                      ..| ....++|.|++|.|+.+......+..+.|..+    ..   ..+...+..|+.+-..|.|      +||+.....+
T Consensus       317 ~~y~~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h------~~~~e~l~~~  390 (601)
T KOG0590|consen  317 EKYGKPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSH------PNIIETLDIV  390 (601)
T ss_pred             cccCCccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccC------CchhhhHHHH
Confidence            445 34678999999988888877666655555443    21   2233336677777777888      9988887777


Q ss_pred             EeCCEEEEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          486 YHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       486 ~~~~hLyIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      .......-+||||.++|+.++.....      ++..++..+++|++.||+|||.+||.|+|||+
T Consensus       391 ~~~~~~~~~mE~~~~Dlf~~~~~~~~------~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~  448 (601)
T KOG0590|consen  391 QEIDGILQSMEYCPYDLFSLVMSNGK------LTPLEADCFFKQLLRGVKYLHSMGLAHRDLKL  448 (601)
T ss_pred             hhcccchhhhhcccHHHHHHHhcccc------cchhhhhHHHHHHHHHHHHHHhcCceeccCcc
Confidence            76655555599999999999998633      88999999999999999999999999999996

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=98.08  E-value=1.5e-05  Score=82.64  Aligned_cols=135  Identities=14%  Similarity=0.198  Sum_probs=78.7

Q ss_pred             eEEEEEeccCCceEEEEEEECCCCcEEEEEEEecCh----hhHHHHHHHHHHHHHhcc-cCCCC---CCCeeEeEeEEE-
Q 008813          416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNK-NDPAD---EHHILRLYDYFY-  486 (552)
Q Consensus       416 Y~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk----~~~~~~lrEIkILk~L~h-hd~~d---~pnIVrL~d~F~-  486 (552)
                      +.....||.|+|+.||.+.|..|++.+|||+.....    ...+++.+|.-....+.+ .++..   +-.++.-++... 
T Consensus        14 l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i   93 (288)
T PF14531_consen   14 LVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRI   93 (288)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEE
T ss_pred             EEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEE
Confidence            456788999999999999999999999999986431    123444444422222111 00000   011222222221 


Q ss_pred             --------eC---C-----EEEEEEecCCCCHHHHHHh---hccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeec
Q 008813          487 --------HL---E-----HLFIVCELLRANLYEFQKF---NQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFIL  547 (552)
Q Consensus       487 --------~~---~-----hLyIVmEll~GsL~d~Lk~---~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L  547 (552)
                              ..   .     ..+++|+.+.++|.+++.-   .....  ..+....-..++.|+++.+++||+.||||.+|
T Consensus        94 ~~~~~~~~~~~~~~~~~v~n~~~l~P~~~~dL~~~~~~l~~~~~~~--~~l~~~arl~lT~Q~I~lvA~Lh~~GlVHgdi  171 (288)
T PF14531_consen   94 PGKPPFFERGPGQSIYWVLNRFLLMPRAQGDLQDLVEALFSRAQTH--SPLAFAARLSLTVQMIRLVANLHSYGLVHGDI  171 (288)
T ss_dssp             TTS-SEEEECETTEEEEEESEEEEEE--SEEHHHHHHHHHHHTTTS--HHHHHHHHHHHHHHHHHHHHHHHHTTEEEST-
T ss_pred             cCCCcceecCCCCccceeehhhhccchhhhcHHHHHHHHhhccccc--chhHHHHHHHHHHHHHHHHHHHhhcceEeccc
Confidence                    11   1     2478889888888887653   22110  01222333466699999999999999999999


Q ss_pred             cccCC
Q 008813          548 FCFSF  552 (552)
Q Consensus       548 ~~~~~  552 (552)
                      +.=+|
T Consensus       172 ~~~nf  176 (288)
T PF14531_consen  172 KPENF  176 (288)
T ss_dssp             SGGGE
T ss_pred             ceeeE
Confidence            87543

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=97.98  E-value=2e-05  Score=74.66  Aligned_cols=111  Identities=10%  Similarity=-0.006  Sum_probs=83.8

Q ss_pred             EEeccCCceEEEEEEECCCCcEEEEEEEecChh--hHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeC---CEEEEE
Q 008813          420 EYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD--FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL---EHLFIV  494 (552)
Q Consensus       420 e~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~--~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~---~hLyIV  494 (552)
                      +.|+.|..+.||++.... |+.++||+......  ....+.+|+++++.+.+.    ...+++++.+....   +..++|
T Consensus         4 ~~l~~G~~n~~~~v~~~~-g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~----~~~vp~~~~~~~~~~~~~~~~~v   78 (223)
T cd05154           4 RQLSGGQSNLTYLLTAGG-GRRLVLRRPPPGALLPSAHDVAREYRVLRALAGT----GVPVPKVLALCEDPSVLGTPFYV   78 (223)
T ss_pred             eecCCCccceEEEEEecC-CcceEEEeCCCcccCcccccHHHHHHHHHHhhCC----CCCCCCEEEECCCCCccCCceEE
Confidence            578999999999997643 57899999876432  345788999999999872    13456666665543   367899


Q ss_pred             EecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCC
Q 008813          495 CELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLV  542 (552)
Q Consensus       495 mEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gI  542 (552)
                      ||++.| +|.+.+.. .      ++++.....++.|++.+|..||+...
T Consensus        79 ~e~i~G~~l~~~~~~-~------~~~~~~~~~i~~~i~~~l~~lH~~~~  120 (223)
T cd05154          79 MERVDGRVLRDRLLR-P------ELSPEERRALARALADTLAALHSVDP  120 (223)
T ss_pred             EEEeCCEecCCCCCC-C------CCCHHHHHHHHHHHHHHHHHHhCCCh
Confidence            999998 67665432 1      17888888999999999999998754

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=97.91  E-value=1.3e-06  Score=97.27  Aligned_cols=118  Identities=19%  Similarity=0.212  Sum_probs=98.2

Q ss_pred             EeccCCceEEEEEEEC---CCCcEEEEEEEecChh---hHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEEEEE
Q 008813          421 YLGSAAFSKVFQAQDL---HTGVDVCLKIIKNDKD---FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIV  494 (552)
Q Consensus       421 ~LGkG~FG~VykA~Dk---ktg~~VAVKIIk~sk~---~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hLyIV  494 (552)
                      .+|+|+||.|++++..   ..+..+|+|++++...   ...+...|..++..++.+     |.+|++..+|+.+..++++
T Consensus         1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~-----~f~v~lhyafqt~~kl~l~   75 (612)
T KOG0603|consen    1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNT-----PFLVKLHYAFQTDGKLYLI   75 (612)
T ss_pred             CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCC-----CceeeeeeeeccccchhHh
Confidence            3799999999977543   4578899999876421   112556788899998854     9999999999999999999


Q ss_pred             EecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          495 CELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       495 mEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      +++..+ +|...+.....      +.+...+.+...++.+++++|..+|||++||.
T Consensus        76 ld~~rgg~lft~l~~~~~------f~~~~~~~~~aelaLald~lh~l~iiyrd~k~  125 (612)
T KOG0603|consen   76 LDFLRGGDLFTRLSKEVM------FDELDVAFYLAELALALDHLHKLGIAYRDYKL  125 (612)
T ss_pred             hhhcccchhhhccccCCc------hHHHHHHHHHHHHHHHHhhcchhHHHHhcccc
Confidence            999987 88887776554      88999999999999999999999999999963

>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]

Probab=97.86  E-value=3.5e-06  Score=98.78  Aligned_cols=120  Identities=25%  Similarity=0.251  Sum_probs=97.0

Q ss_pred             ceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChh-----hHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCC
Q 008813          415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD-----FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE  489 (552)
Q Consensus       415 RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~-----~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~  489 (552)
                      .|...+.||.+.|=+|.+|++.. |. |.||++-+...     -..+-+.|++ ...+++      ||++.+.-+-....
T Consensus        24 e~~~~~~LGstRFlKv~r~k~~e-G~-vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~------pn~lPfqk~~~t~k   94 (1431)
T KOG1240|consen   24 ECHYVENLGSTRFLKVARAKDRE-GL-VVVKVFVKQDPTISLRPFKQRLEEIK-FALMKA------PNCLPFQKVLVTDK   94 (1431)
T ss_pred             ceeeecccCchhhhhhhhccCCC-ce-EEEEEEeccCCCCCchHHHHHHHHHH-HHhhcC------CcccchHHHHHhhH
Confidence            47778999999999999998763 43 89999876421     1234456666 444455      99998877777777


Q ss_pred             EEEEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          490 HLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       490 hLyIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ..|||-+|+..+|++.|..+..      +.+-+-+.|+.|++.||.-+|..||+|.||||
T Consensus        95 AAylvRqyvkhnLyDRlSTRPF------L~~iEKkWiaFQLL~al~qcH~~gVcHGDIKs  148 (1431)
T KOG1240|consen   95 AAYLVRQYVKHNLYDRLSTRPF------LVLIEKKWIAFQLLKALSQCHKLGVCHGDIKS  148 (1431)
T ss_pred             HHHHHHHHHhhhhhhhhccchH------HHHHHHHHHHHHHHHHHHHHHHcCcccccccc
Confidence            8899999999999999887654      78888899999999999999999999999997

>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]

Probab=97.76  E-value=0.00029  Score=69.61  Aligned_cols=119  Identities=16%  Similarity=-0.019  Sum_probs=87.3

Q ss_pred             EEEEeccCCceEEEEEEECCCCcEEEEEEEecC---------hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeC
Q 008813          418 VTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---------KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL  488 (552)
Q Consensus       418 Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s---------k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~  488 (552)
                      .+..|-+|+=+.|+++.+  .|+.+.||.=...         +..+.+.++|+++|.++.-      -+|..-.=+|.+.
T Consensus        11 ~l~likQGAEArv~~~~~--~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~------~GI~~P~l~~~D~   82 (229)
T KOG3087|consen   11 SLELIKQGAEARVPRGSF--SGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRA------LGIPAPRLIFIDT   82 (229)
T ss_pred             cceeeeccceeeEeeecc--CCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHH------hCCCCceEEEEec
Confidence            456888999999999987  4677777743221         2234577899999999876      3443333345566


Q ss_pred             CEEEEEEecCCC--CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecc
Q 008813          489 EHLFIVCELLRA--NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILF  548 (552)
Q Consensus       489 ~hLyIVmEll~G--sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~  548 (552)
                      ..-+|+|||+.|  ++.+++.......    ........++++|=+.+.-||.++|||-||-
T Consensus        83 ~~~~i~ME~~~g~~~vk~~i~~~~~~~----~~d~~~~~~~~~iG~~igklH~ndiiHGDLT  140 (229)
T KOG3087|consen   83 YGGQIYMEFIDGASTVKDFILSTMEDE----SEDEGLAELARRIGELIGKLHDNDIIHGDLT  140 (229)
T ss_pred             CCCeEEEEeccchhHHHHHHHHHccCc----ccchhHHHHHHHHHHHHHHhhhCCeeccccc
Confidence            666899999999  8999988765432    2333337889999999999999999999984

>KOG1243 consensus Protein kinase [General function prediction only]

Probab=97.69  E-value=0.0001  Score=83.16  Aligned_cols=103  Identities=17%  Similarity=0.086  Sum_probs=83.3

Q ss_pred             EEEECCCCcEEEEEEEecChh-hHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEEEEEEecCCCCHHHHHHhhc
Q 008813          432 QAQDLHTGVDVCLKIIKNDKD-FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQ  510 (552)
Q Consensus       432 kA~Dkktg~~VAVKIIk~sk~-~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hLyIVmEll~GsL~d~Lk~~~  510 (552)
                      .|..+.++.+|.|.+.+.... ....+.+-++-|+.|+|      |+|+++++.+...+++|||+|-+.. |..+++.  
T Consensus        30 ~~t~k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRH------P~Il~yL~t~e~~~~~ylvTErV~P-l~~~lk~--  100 (690)
T KOG1243|consen   30 DGTRKADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRH------PNILSYLDTTEEEGTLYLVTERVRP-LETVLKE--  100 (690)
T ss_pred             ccceeccCCceEEEEEeCCCchhhHHHHHHHHHhhhccC------chhhhhhhhhcccCceEEEeecccc-HHHHHHH--
Confidence            355667788999998886533 44667888999999999      9999999999999999999998765 3444454  


Q ss_pred             cCCCCcCCCHHHHHHHHHHHHHHHHHHH-hCCCeeeecccc
Q 008813          511 ESGGEAYFTLGRLQVCSTFLLTLLMLIF-LLLVIYFILFCF  550 (552)
Q Consensus       511 ~~g~~~pLSe~~I~~Ia~QIL~AL~YLH-s~gIIH~~L~~~  550 (552)
                             ++...+...+.||+.||.||| +.+++|--||--
T Consensus       101 -------l~~~~v~~Gl~qIl~AL~FL~~d~~lvHgNv~~~  134 (690)
T KOG1243|consen  101 -------LGKEEVCLGLFQILAALSFLNDDCNLVHGNVCKD  134 (690)
T ss_pred             -------hHHHHHHHHHHHHHHHHHHHhccCCeeeccEeee
Confidence                   455677888999999999998 778999888753

>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]

Probab=97.67  E-value=4.4e-05  Score=82.04  Aligned_cols=54  Identities=19%  Similarity=0.072  Sum_probs=48.9

Q ss_pred             CEEEEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          489 EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       489 ~hLyIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ..+|+||.-.+.+|.+++..+.       .+....+.|+.|+++|+.|||++||.|+|||.
T Consensus       316 ~tlylvMkrY~~tLr~yl~~~~-------~s~r~~~~~laQlLEav~hL~~hgvAhRDlKS  369 (598)
T KOG4158|consen  316 KTLYLVMKRYRQTLREYLWTRH-------RSYRTGRVILAQLLEAVTHLHKHGVAHRDLKS  369 (598)
T ss_pred             ceEEEehhcchhhHHHHHhcCC-------CchHHHHHHHHHHHHHHHHHHHccchhhcccc
Confidence            4599999999999999999765       57788889999999999999999999999985

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=97.54  E-value=5.3e-05  Score=84.07  Aligned_cols=126  Identities=16%  Similarity=0.104  Sum_probs=100.1

Q ss_pred             eecCceEEEEEeccCCceEEEEEEEC-CCCcEEEEEEEecCh-hhH--HHHHHHHHHHHHhcccCCCCCCCeeEeEeEEE
Q 008813          411 VIAGRYYVTEYLGSAAFSKVFQAQDL-HTGVDVCLKIIKNDK-DFF--DQSLDEIKLLKLVNKNDPADEHHILRLYDYFY  486 (552)
Q Consensus       411 vi~~RY~Ile~LGkG~FG~VykA~Dk-ktg~~VAVKIIk~sk-~~~--~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~  486 (552)
                      ....+|..+..||.|.|+.|+.+... .++..|++|.+.+.. ...  ...+.|+-++..+.-|     .++++++..|.
T Consensus       262 ~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~-----~~~~g~~~~W~  336 (524)
T KOG0601|consen  262 CKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSH-----LPSVGKNSSWS  336 (524)
T ss_pred             eecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcc-----cccCCCCCCcc
Confidence            34467899999999999999998755 567889999876641 111  2345777777777765     89999999999


Q ss_pred             eCCEEEEEEecCCC-C--HHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          487 HLEHLFIVCELLRA-N--LYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       487 ~~~hLyIVmEll~G-s--L~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      .-.+.||-.|||.+ +  |...+...        +.+...+.+..|++.++.++|++.++|+|++|
T Consensus       337 ~~r~~~ip~e~~~~~s~~l~~~~~~~--------~d~~~~~~~~~q~~~~l~~i~s~~~~~~d~~p  394 (524)
T KOG0601|consen  337 QLRQGYIPLEFCEGGSSSLRSVTSQM--------LDEDPRLRLTAQILTALNVIHSKLFVHLDVKP  394 (524)
T ss_pred             ccccccCchhhhcCcchhhhhHHHHh--------cCcchhhhhHHHHHhccccccchhhhcccccc
Confidence            88889999999976 4  44433322        78889999999999999999999999999987

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=97.52  E-value=0.0018  Score=66.55  Aligned_cols=86  Identities=8%  Similarity=-0.076  Sum_probs=63.6

Q ss_pred             HHHHHHHHHHHhcccCCCCCCCeeEeEeEEEe-----CCEEEEEEecCCC--CHHHHHHhhccCCCCcCCCHHHHHHHHH
Q 008813          456 QSLDEIKLLKLVNKNDPADEHHILRLYDYFYH-----LEHLFIVCELLRA--NLYEFQKFNQESGGEAYFTLGRLQVCST  528 (552)
Q Consensus       456 ~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~-----~~hLyIVmEll~G--sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~  528 (552)
                      .+.+|...+..|... .   -.++....++..     ...-+||||++++  +|.+++......    +.+......++.
T Consensus        74 ~a~rE~~~l~~L~~~-G---IptP~pVa~~e~~~~~~~~~s~LVte~l~~~~sL~~~~~~~~~~----~~~~~~~~~ll~  145 (268)
T PRK15123         74 GADREWRAIHRLHEV-G---VDTMTGVAFGERGSNPATRTSFIITEDLAPTISLEDYCADWATN----PPDPRLKRMLIK  145 (268)
T ss_pred             HHHHHHHHHHHHHHc-C---CCCCCeeEEEEecCCCccceeEEEEeeCCCCccHHHHHHhhccc----CCCHHHHHHHHH
Confidence            478999999998762 1   223334444443     2357899999998  799998653221    156777889999


Q ss_pred             HHHHHHHHHHhCCCeeeeccc
Q 008813          529 FLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       529 QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      +|+..+.-||.+||+|.||.+
T Consensus       146 ~la~~i~~LH~~Gi~HgDL~~  166 (268)
T PRK15123        146 RVATMVRDMHAAGINHRDCYI  166 (268)
T ss_pred             HHHHHHHHHHHCcCccCCCCh
Confidence            999999999999999999974

>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]

Probab=97.47  E-value=0.00055  Score=75.94  Aligned_cols=111  Identities=15%  Similarity=0.131  Sum_probs=83.8

Q ss_pred             eEEEEEEECCCCcEEEEEEEecChhhH-HHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeC----CEEEEEEecCCC--
Q 008813          428 SKVFQAQDLHTGVDVCLKIIKNDKDFF-DQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL----EHLFIVCELLRA--  500 (552)
Q Consensus       428 G~VykA~Dkktg~~VAVKIIk~sk~~~-~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~----~hLyIVmEll~G--  500 (552)
                      .+.|+|....+|..|++|.+...+... .....-+++++++.|      .|||.+.++|.+.    ..+++|++|..+  
T Consensus       290 ~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h------~NvV~frevf~t~tF~D~SlvlvYDYyP~s~  363 (655)
T KOG3741|consen  290 ITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCH------TNVVPFREVFLTYTFGDLSLVLVYDYYPSSP  363 (655)
T ss_pred             ceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhcc------CceeehhhhhhhhccCcceEEEEEecCCCCc
Confidence            467999999999999999995433211 223344778899999      9999999999844    469999999886  


Q ss_pred             CHHHHHHhhccCC---------CCcCCCHHHHHHHHHHHHHHHHHHHhCCCee
Q 008813          501 NLYEFQKFNQESG---------GEAYFTLGRLQVCSTFLLTLLMLIFLLLVIY  544 (552)
Q Consensus       501 sL~d~Lk~~~~~g---------~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH  544 (552)
                      +|+++.-.+....         .....+|..+|.|+.|+..||.+||+.|+.=
T Consensus       364 TL~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssGLAc  416 (655)
T KOG3741|consen  364 TLYDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSGLAC  416 (655)
T ss_pred             hHHHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcCcee
Confidence            8998764221110         0022789999999999999999999998653

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=97.35  E-value=6.1e-05  Score=83.59  Aligned_cols=128  Identities=16%  Similarity=0.037  Sum_probs=104.8

Q ss_pred             ecCceEEEEEecc--CCceEEEEEEE--CCCCcEEEEEEEec--C-hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeE
Q 008813          412 IAGRYYVTEYLGS--AAFSKVFQAQD--LHTGVDVCLKIIKN--D-KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDY  484 (552)
Q Consensus       412 i~~RY~Ile~LGk--G~FG~VykA~D--kktg~~VAVKIIk~--s-k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~  484 (552)
                      ...++.+...+|.  |.+|.||.+..  ...+..+|+|.-+.  . ......-.+|+...++++-|     ++.++.+..
T Consensus       112 ~~~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~-----~~~v~~~~~  186 (524)
T KOG0601|consen  112 FDQRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSH-----ENPVRDSPA  186 (524)
T ss_pred             hhhhcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCcc-----ccccccCcc
Confidence            4467788889999  99999999987  77888999997332  2 12223445777777777765     999999999


Q ss_pred             EEeCCEEEEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHH----HHHHHHhCCCeeeeccc
Q 008813          485 FYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLT----LLMLIFLLLVIYFILFC  549 (552)
Q Consensus       485 F~~~~hLyIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~----AL~YLHs~gIIH~~L~~  549 (552)
                      |...++++|-+|+|+.+|.++......-     ++...++.++.++..    ||..+|..+|+|-++|+
T Consensus       187 ~e~~~~lfiqtE~~~~sl~~~~~~~~~~-----~p~~~l~~~~~~~~~~~~~al~~~hs~~~~~~~~kp  250 (524)
T KOG0601|consen  187 WEGSGILFIQTELCGESLQSYCHTPCNF-----LPDNLLWNSLRDWLSRDVTALSHLHSNNIVHDDLKP  250 (524)
T ss_pred             cccCCcceeeeccccchhHHhhhccccc-----CCchhhhhHHhhhhhcccccccccCCCcccccccch
Confidence            9999999999999999888887654431     789999999999999    99999999999999985

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=97.22  E-value=0.00068  Score=66.22  Aligned_cols=105  Identities=18%  Similarity=0.199  Sum_probs=65.6

Q ss_pred             EEEEEEECCCCcEEEEEEEecC---------------h------------hhHHHHHHHHHHHHHhcccCCCCCCCeeEe
Q 008813          429 KVFQAQDLHTGVDVCLKIIKND---------------K------------DFFDQSLDEIKLLKLVNKNDPADEHHILRL  481 (552)
Q Consensus       429 ~VykA~Dkktg~~VAVKIIk~s---------------k------------~~~~~~lrEIkILk~L~hhd~~d~pnIVrL  481 (552)
                      .||.|... .+..+|||+.+..               +            .....+.+|.+.|+++...    .-++++.
T Consensus         1 ~Vy~~~~~-~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~----Gv~vP~p   75 (188)
T PF01163_consen    1 DVYHAIDP-DGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEA----GVPVPKP   75 (188)
T ss_dssp             EEEEEEEC-TTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCT----T-SS--E
T ss_pred             CEEEEECC-CCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHC----CccCCcE
Confidence            38888764 5678999998642               0            0123577999999999872    1256777


Q ss_pred             EeEEEeCCEEEEEEecCC--C-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHH-HHhCCCeeeecccc
Q 008813          482 YDYFYHLEHLFIVCELLR--A-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLML-IFLLLVIYFILFCF  550 (552)
Q Consensus       482 ~d~F~~~~hLyIVmEll~--G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~Y-LHs~gIIH~~L~~~  550 (552)
                      +++-  .  .+|||||++  | .|..+....        ++......++.+++..+.. +|..||||-||-.+
T Consensus        76 ~~~~--~--~~ivME~I~~~G~~~~~l~~~~--------~~~~~~~~~~~~il~~~~~~~~~~givHGDLs~~  136 (188)
T PF01163_consen   76 YDYN--R--NVIVMEYIGEDGVPLPRLKDVD--------LSPEEPKELLEEILEEIIKMLHKAGIVHGDLSEY  136 (188)
T ss_dssp             EEEE--T--TEEEEE--EETTEEGGCHHHCG--------GGGSTHHHHHHHHHHHHHHHHHCTTEEESS-STT
T ss_pred             EEEe--C--CEEEEEecCCCccchhhHHhcc--------ccchhHHHHHHHHHHHHHHHHHhcCceecCCChh
Confidence            6542  2  379999999  7 454433321        2234567788888886655 57999999999654

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=97.21  E-value=0.0028  Score=62.60  Aligned_cols=108  Identities=13%  Similarity=0.014  Sum_probs=73.8

Q ss_pred             EEeccCCceEEEEEEECCCCcEEEEEEEecC---------hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCE
Q 008813          420 EYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---------KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH  490 (552)
Q Consensus       420 e~LGkG~FG~VykA~Dkktg~~VAVKIIk~s---------k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~h  490 (552)
                      ..|++|+=+.|+.+...  |..+.+|.=..+         +-......+|.++|.++..      -.|..-+=++.+...
T Consensus         2 ~~i~~GAEa~i~~~~~~--g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~------~GV~~P~v~dvD~~~   73 (204)
T COG3642           2 DLIKQGAEAIIYLTDFL--GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKARE------AGVPVPIVYDVDPDN   73 (204)
T ss_pred             chhhCCcceeEEeeecc--CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHH------cCCCCCeEEEEcCCC
Confidence            35788999999988653  344555542211         1123567899999999887      344333334455666


Q ss_pred             EEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecc
Q 008813          491 LFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILF  548 (552)
Q Consensus       491 LyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~  548 (552)
                      ..|+|||.+| .|.+++....             ..+++.|=.-+.-||.+||||.||-
T Consensus        74 ~~I~me~I~G~~lkd~l~~~~-------------~~~~r~vG~~vg~lH~~givHGDLT  119 (204)
T COG3642          74 GLIVMEYIEGELLKDALEEAR-------------PDLLREVGRLVGKLHKAGIVHGDLT  119 (204)
T ss_pred             CEEEEEEeCChhHHHHHHhcc-------------hHHHHHHHHHHHHHHhcCeecCCCc
Confidence            7899999999 6777877541             2355556666778999999999984

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=96.97  E-value=0.00014  Score=75.09  Aligned_cols=115  Identities=11%  Similarity=0.118  Sum_probs=91.3

Q ss_pred             ceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC---hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEE
Q 008813          415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL  491 (552)
Q Consensus       415 RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s---k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hL  491 (552)
                      ...++.+|...-.|..|++++..+  .+..|+++..   ......+..|.-.|+-+.|      |||..+++.+..+.++
T Consensus       191 ~lnl~tkl~e~hsgelwrgrwqgn--divakil~vr~~t~risrdfneefp~lrifsh------pnilpvlgacnsppnl  262 (448)
T KOG0195|consen  191 SLNLITKLAESHSGELWRGRWQGN--DIVAKILNVREVTARISRDFNEEFPALRIFSH------PNILPVLGACNSPPNL  262 (448)
T ss_pred             hhhhhhhhccCCCcccccccccCc--chhhhhhhhhhcchhhcchhhhhCcceeeecC------CchhhhhhhccCCCCc
Confidence            344566788888899999998654  4566766542   2223456677778888888      9999999999999999


Q ss_pred             EEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCC
Q 008813          492 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLL  541 (552)
Q Consensus       492 yIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~g  541 (552)
                      .++..||.. +|+.+|.......    +...++..++..|+.|+.|||+..
T Consensus       263 v~isq~mp~gslynvlhe~t~vv----vd~sqav~faldiargmaflhsle  309 (448)
T KOG0195|consen  263 VIISQYMPFGSLYNVLHEQTSVV----VDHSQAVRFALDIARGMAFLHSLE  309 (448)
T ss_pred             eEeeeeccchHHHHHHhcCccEE----EecchHHHHHHHHHhhHHHHhhcc
Confidence            999999986 9999998655432    678899999999999999999874

>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=96.96  E-value=0.0061  Score=59.50  Aligned_cols=85  Identities=11%  Similarity=-0.014  Sum_probs=65.2

Q ss_pred             HHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeC----CEEEEEEecCCC--CHHHHHHhhccCCCCcCCCHHHHHHHHH
Q 008813          455 DQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL----EHLFIVCELLRA--NLYEFQKFNQESGGEAYFTLGRLQVCST  528 (552)
Q Consensus       455 ~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~----~hLyIVmEll~G--sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~  528 (552)
                      ..+.+|...+..|... .   -.+++.+.+...+    ..-+||||.+.+  +|.+++.....      ++......++.
T Consensus        56 ~ra~~E~~~~~~L~~~-G---i~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~------~~~~~~~~ll~  125 (206)
T PF06293_consen   56 SRAKREWRNLQRLREA-G---IPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQ------LDPSQRRELLR  125 (206)
T ss_pred             hHHHHHHHHHHHHHHc-C---CCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcc------cchhhHHHHHH
Confidence            4678999998888762 1   2344555555543    245899999988  79999987443      45667789999


Q ss_pred             HHHHHHHHHHhCCCeeeeccc
Q 008813          529 FLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       529 QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ++...+.-||.+||+|.||.+
T Consensus       126 ~l~~~i~~lH~~gi~H~Dl~~  146 (206)
T PF06293_consen  126 ALARLIAKLHDAGIYHGDLNP  146 (206)
T ss_pred             HHHHHHHHHHHCcCCCCCCCc
Confidence            999999999999999999986

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane

>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily

Probab=96.87  E-value=0.031  Score=52.86  Aligned_cols=103  Identities=13%  Similarity=0.117  Sum_probs=78.7

Q ss_pred             EEEeccCCceEEEEEEECCCCcEEEEEEEecChhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEE---eCCEEEEEE
Q 008813          419 TEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFY---HLEHLFIVC  495 (552)
Q Consensus       419 le~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~---~~~hLyIVm  495 (552)
                      ++.|+.|..+.||+.....  ..+++|+.... .....+.+|..+++.|..+.    ..+++++....   .....+++|
T Consensus         2 i~~l~~G~~n~~~~v~~~~--~~~vlK~~~~~-~~~~~~~~e~~~~~~l~~~~----~pvP~~~~~~~~~~~~~~~~~~~   74 (239)
T PF01636_consen    2 IRPLSGGFSNRVYRVTTDD--GRYVLKFYRPP-DAAERLRREAAVLRQLAEHG----IPVPRVLAFDTSDEFNGFPYLLM   74 (239)
T ss_dssp             EEEEEESSSSEEEEEEETT--SEEEEEEESSH-HHHHHHHHHHHHHHHHHHTT----SBS--EEEEEEETEETSEEEEEE
T ss_pred             CccCCCCCeeeEEEEEECC--cEEEEEEeCCC-CCHHHHHHHHHHHHHHHhcC----CCCceEEeecccccccccceEEE
Confidence            4688999999999998765  48899998755 44567889999999998731    13566665443   335689999


Q ss_pred             ecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhC
Q 008813          496 ELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLL  540 (552)
Q Consensus       496 Ell~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~  540 (552)
                      +++.| .+..      .      .+......++.++...|.-||+.
T Consensus        75 ~~i~g~~~~~------~------~~~~~~~~~~~~~~~~l~~lh~~  108 (239)
T PF01636_consen   75 EYIPGRPLDD------E------LSPEQRPELLRQLGRALAQLHQV  108 (239)
T ss_dssp             EEESSEEHHH------T------STHHHHHHHHHHHHHHHHHHHHS
T ss_pred             EEeccccccc------c------ccccccccccccchhhhhhcccc
Confidence            99999 6766      1      57788889999999999999986

; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....

>PRK09902 hypothetical protein; Provisional

Probab=96.86  E-value=0.013  Score=58.75  Aligned_cols=115  Identities=9%  Similarity=-0.007  Sum_probs=80.3

Q ss_pred             ccCCceEEEEEEECCCCcEEEEEEEecC-------hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEE-eC----CE
Q 008813          423 GSAAFSKVFQAQDLHTGVDVCLKIIKND-------KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFY-HL----EH  490 (552)
Q Consensus       423 GkG~FG~VykA~Dkktg~~VAVKIIk~s-------k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~-~~----~h  490 (552)
                      |+||.+-|+.-...  |+.+-||...+.       +-....+.+|+..|+.|....   -| +++.. ++. ..    -.
T Consensus        27 ~rgG~SgV~r~~~~--g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~G---vP-VP~pv-f~~~~k~~~~~r   99 (216)
T PRK09902         27 RRNGMSGVQCVERN--GKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAG---VI-VPKIV-FGEAVKIEGEWR   99 (216)
T ss_pred             CCCCcceEEEEEeC--CcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcC---CC-CCccc-eeeeeccCCceE
Confidence            56788888876432  335777766531       113467889999999998731   12 44444 222 11    24


Q ss_pred             EEEEEecCCC--CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecc
Q 008813          491 LFIVCELLRA--NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILF  548 (552)
Q Consensus       491 LyIVmEll~G--sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~  548 (552)
                      -+||+|-+++  +|.+++......    +.+...-..++.+|...|.-||+.|+.|.+|-
T Consensus       100 A~LVTe~L~g~~~L~~~l~~~~~~----~~~~~~k~~il~~va~~ia~LH~~Gv~Hgdly  155 (216)
T PRK09902        100 ALLVTEDMAGFISIADWYAQHAVS----PYSDEVRQAMLKAVALAFKKMHSVNRQHGCCY  155 (216)
T ss_pred             EEEEEEeCCCCccHHHHHhcCCcC----CcchHHHHHHHHHHHHHHHHHHHCCCcCCCCC
Confidence            7999998886  999998764321    25677778899999999999999999999874

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=96.82  E-value=9.3e-05  Score=83.82  Aligned_cols=127  Identities=13%  Similarity=0.059  Sum_probs=101.0

Q ss_pred             CceEEEEEeccCCceEEEEEEECC-CCcEEEEEEEecC---hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCC
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLH-TGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE  489 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkk-tg~~VAVKIIk~s---k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~  489 (552)
                      ..|.+.+.||+|+|+.|-.+.... +...+|+|.+...   ..+..++..|..+-+.+..|     +|++++++.....+
T Consensus        20 ~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h-----~n~~~~~~~~~~~~   94 (601)
T KOG0590|consen   20 SQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKH-----SNTVHMIEPSSSPR   94 (601)
T ss_pred             ccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCcccccccccccc-----ccccccCCccCCCc
Confidence            457788889999999999887643 3456777777654   33445666788888888833     99999999999999


Q ss_pred             EEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHH-hCCCeeeeccc
Q 008813          490 HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIF-LLLVIYFILFC  549 (552)
Q Consensus       490 hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLH-s~gIIH~~L~~  549 (552)
                      ..++++++..+ +++..+......+    .+...+..++.|+..+|.|+| ..++.|+++++
T Consensus        95 ~~~~~~~~s~g~~~f~~i~~~~~~~----~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP  152 (601)
T KOG0590|consen   95 SYLLSLSYSDGGSLFSKISHPDSTG----TSSSSASRYLPQLNSGLSYLHPENGVTHRDIKP  152 (601)
T ss_pred             ccccccCcccccccccccccCCccC----CCCcchhhhhhhhccCccccCcccccccCCCCC
Confidence            99999999776 8888773222112    678889999999999999999 99999999986

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=96.65  E-value=0.0073  Score=62.79  Aligned_cols=115  Identities=16%  Similarity=0.143  Sum_probs=81.8

Q ss_pred             eEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC----------hh-------------hHHHHHHHHHHHHHhcccCC
Q 008813          416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND----------KD-------------FFDQSLDEIKLLKLVNKNDP  472 (552)
Q Consensus       416 Y~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s----------k~-------------~~~~~lrEIkILk~L~hhd~  472 (552)
                      +.+...||-|.=+.||.|.+. .|..+|||.-+..          +.             .+..+.+|.++|++|...  
T Consensus        93 e~iG~~IGvGKEsdVY~~~~~-~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~--  169 (304)
T COG0478          93 EAIGTKIGVGKESDVYVAIDP-KGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPE--  169 (304)
T ss_pred             HhhccccccCccceEEEEECC-CCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhc--
Confidence            456789999999999999886 6889999987542          11             123578999999999861  


Q ss_pred             CCCCCeeEeEeEEEeCCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          473 ADEHHILRLYDYFYHLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       473 ~d~pnIVrL~d~F~~~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                        .-.|++-+++    +..++|||+..| .|+..-           +....+..|+..|++-+.-+-+.||||-||--|
T Consensus       170 --G~~VP~P~~~----nRHaVvMe~ieG~eL~~~r-----------~~~en~~~il~~il~~~~~~~~~GiVHGDlSef  231 (304)
T COG0478         170 --GVKVPKPIAW----NRHAVVMEYIEGVELYRLR-----------LDVENPDEILDKILEEVRKAYRRGIVHGDLSEF  231 (304)
T ss_pred             --CCCCCCcccc----ccceeeeehcccceeeccc-----------CcccCHHHHHHHHHHHHHHHHHcCccccCCchh
Confidence              0145555442    446899999999 555421           234455566666777777666999999998654

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=96.34  E-value=0.0024  Score=75.58  Aligned_cols=91  Identities=11%  Similarity=0.128  Sum_probs=63.5

Q ss_pred             ecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEE
Q 008813          412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL  491 (552)
Q Consensus       412 i~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hL  491 (552)
                      ....|..++.|..|+||.||..+++.+.+.+|+|+=+ +..    ++|-  ||.....      |.+|            
T Consensus        81 ~e~df~~IklisngAygavylvrh~~trqrfa~kiNk-q~l----ilRn--ilt~a~n------pfvv------------  135 (1205)
T KOG0606|consen   81 SESDFNTIKLISNGAYGAVYLVRHKETRQRFAMKINK-QNL----ILRN--ILTFAGN------PFVV------------  135 (1205)
T ss_pred             CccccceeEeeccCCCCceeeeeccccccchhhcccc-cch----hhhc--cccccCC------ccee------------
Confidence            3467899999999999999999999999999995433 221    1111  3333333      5555            


Q ss_pred             EEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          492 FIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       492 yIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                              |+-..+++..+.      ++..-        +.+++|||+.||+|++||.
T Consensus       136 --------gDc~tllk~~g~------lPvdm--------vla~Eylh~ygivhrdlkp  171 (1205)
T KOG0606|consen  136 --------GDCATLLKNIGP------LPVDM--------VLAVEYLHSYGIVHRDLKP  171 (1205)
T ss_pred             --------chhhhhcccCCC------Ccchh--------hHHhHhhccCCeecCCCCC
Confidence                    555555665332      33322        7899999999999999986

>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]

Probab=96.30  E-value=0.013  Score=57.82  Aligned_cols=107  Identities=20%  Similarity=0.097  Sum_probs=72.0

Q ss_pred             eEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEEEEEE
Q 008813          416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVC  495 (552)
Q Consensus       416 Y~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hLyIVm  495 (552)
                      -++.+.|++|.+|.||+|.+.  +..+|+|+-+... .+..+..|+++|..++..     .--.++|.+-    ..++.|
T Consensus        24 ~~v~~~L~KG~~s~Vyl~~~~--~~~~a~Kvrr~ds-~r~~l~kEakiLeil~g~-----~~~p~vy~yg----~~~i~m   91 (201)
T COG2112          24 LRVEKELAKGTTSVVYLGEWR--GGEVALKVRRRDS-PRRNLEKEAKILEILAGE-----GVTPEVYFYG----EDFIRM   91 (201)
T ss_pred             hhhhhhhhcccccEEEEeecc--CceEEEEEecCCc-chhhHHHHHHHHHHhhhc-----CCCceEEEec----hhhhhh
Confidence            456778999999999999874  5689999877543 357788999999999872     2334555442    245669


Q ss_pred             ecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeec
Q 008813          496 ELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFIL  547 (552)
Q Consensus       496 Ell~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L  547 (552)
                      ||+.| .|.++-...         +    +.-+..++++---|-..||-|-.|
T Consensus        92 e~i~G~~L~~~~~~~---------~----rk~l~~vlE~a~~LD~~GI~H~El  131 (201)
T COG2112          92 EYIDGRPLGKLEIGG---------D----RKHLLRVLEKAYKLDRLGIEHGEL  131 (201)
T ss_pred             hhhcCcchhhhhhcc---------c----HHHHHHHHHHHHHHHHhccchhhh
Confidence            99999 887764421         1    112233455544555667766544

>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]

Probab=95.66  E-value=0.069  Score=55.07  Aligned_cols=114  Identities=13%  Similarity=0.099  Sum_probs=77.0

Q ss_pred             EeccCCceEEEEEEECCCCcEEEEEEEecChh-------------------------hHHHHHHHHHHHHHhcccCCCCC
Q 008813          421 YLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD-------------------------FFDQSLDEIKLLKLVNKNDPADE  475 (552)
Q Consensus       421 ~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~-------------------------~~~~~lrEIkILk~L~hhd~~d~  475 (552)
                      .|..|.=+.||+|.. ..+..+|||+.+....                         .......|.+-|+++...    .
T Consensus        55 ~istGKEA~Vy~a~~-~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~NL~R~~eA----G  129 (268)
T COG1718          55 CISTGKEANVYLAET-GDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNLKRAYEA----G  129 (268)
T ss_pred             eecCCcceEEEeecc-CCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHHHHHHHHc----C
Confidence            567788888999975 4678999999875311                         112356788888888751    1


Q ss_pred             CCeeEeEeEEEeCCEEEEEEecCCCC--HHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHh-CCCeeeecccc
Q 008813          476 HHILRLYDYFYHLEHLFIVCELLRAN--LYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFL-LLVIYFILFCF  550 (552)
Q Consensus       476 pnIVrL~d~F~~~~hLyIVmEll~Gs--L~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs-~gIIH~~L~~~  550 (552)
                      -.+++-+.++    +-.|||||++..  -.-.|+.       .++...++..+..++++.+.-|-. .++||-||--|
T Consensus       130 VrvP~Pi~~~----~nVLvMEfIg~~g~pAP~LkD-------v~~e~~e~~~~~~~~v~~~~~l~~~a~LVHgDLSEy  196 (268)
T COG1718         130 VRVPEPIAFR----NNVLVMEFIGDDGLPAPRLKD-------VPLELEEAEGLYEDVVEYMRRLYKEAGLVHGDLSEY  196 (268)
T ss_pred             CCCCCceeec----CCeEEEEeccCCCCCCCCccc-------CCcCchhHHHHHHHHHHHHHHHHHhcCcccccchhh
Confidence            3344444433    257999999864  1112222       124555788899999999998876 99999999654

>PLN02876 acyl-CoA dehydrogenase

Probab=95.63  E-value=0.054  Score=63.67  Aligned_cols=112  Identities=12%  Similarity=0.095  Sum_probs=76.0

Q ss_pred             EEEeccCCceEEEEEEECCCC--cEEEEEEEecCh--hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeC---CEE
Q 008813          419 TEYLGSAAFSKVFQAQDLHTG--VDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL---EHL  491 (552)
Q Consensus       419 le~LGkG~FG~VykA~Dkktg--~~VAVKIIk~sk--~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~---~hL  491 (552)
                      ++.|+.|.+..+|+......+  ..+++|+.....  .....+.+|+++|+.|..+.   ..-|++++.++...   +..
T Consensus        43 v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~~~---~vpVP~v~~~~~d~~v~G~~  119 (822)
T PLN02876         43 VSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQSAHAVEREYQVLRALGEHT---DVPVPKVYCLCTDASVIGTA  119 (822)
T ss_pred             EEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCccHHHHHHHHHHHHHHhhcC---CCCCCcEEEEecCCCcCCCc
Confidence            467899999999988654322  456777654322  12346789999999997320   02347777766543   468


Q ss_pred             EEEEecCCCC-HHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCC
Q 008813          492 FIVCELLRAN-LYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLL  541 (552)
Q Consensus       492 yIVmEll~Gs-L~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~g  541 (552)
                      |+|||++.|. +.+    ....    .++..+.+.++.|++.+|..||+..
T Consensus       120 flVME~v~G~~~~~----~~~~----~~~~~~r~~l~~~l~~~La~LH~vd  162 (822)
T PLN02876        120 FYIMEYLEGRIFVD----PKLP----GVAPERRRAIYRATAKVLAALHSAD  162 (822)
T ss_pred             eEEEEecCCcccCC----ccCC----CCCHHHHHHHHHHHHHHHHHHhCCC
Confidence            9999999993 321    1101    1567778889999999999999754

>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP

Probab=95.55  E-value=0.21  Score=49.41  Aligned_cols=116  Identities=19%  Similarity=0.267  Sum_probs=84.6

Q ss_pred             EEeccCCceEEEEEEECCCCcEEEEEEEecCh-----------------hhHHHHHHHHHHHHHhcccCCCCCCCeeEeE
Q 008813          420 EYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK-----------------DFFDQSLDEIKLLKLVNKNDPADEHHILRLY  482 (552)
Q Consensus       420 e~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk-----------------~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~  482 (552)
                      ..||+|+.=.||..-   .....+||+++...                 ...++..+|+.-...+.-.......+|.+++
T Consensus         7 ~~i~~G~~R~cy~HP---~dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~~   83 (199)
T PF10707_consen    7 DLIAQGGERDCYQHP---DDPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPRFY   83 (199)
T ss_pred             cccccCCCceEEECC---CCCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccccEe
Confidence            478999988888543   34557899987654                 1246778899888887722345568999999


Q ss_pred             eEEEeCCEEEEEEecCC---C----CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          483 DYFYHLEHLFIVCELLR---A----NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       483 d~F~~~~hLyIVmEll~---G----sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ++..+.--+-+|+|...   |    +|.++++...       +++ .   +...+-+-.+||-+++|+..+|.+
T Consensus        84 G~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~~~~-------~~~-~---~~~~L~~f~~~l~~~~Iv~~dl~~  146 (199)
T PF10707_consen   84 GFVETNLGLGLVVELIRDADGNISPTLEDYLKEGG-------LTE-E---LRQALDEFKRYLLDHHIVIRDLNP  146 (199)
T ss_pred             EEEecCCceEEEEEEEECCCCCcCccHHHHHHcCC-------ccH-H---HHHHHHHHHHHHHHcCCeecCCCc
Confidence            99999999999999852   2    7999996543       555 2   333344455688899999999876

PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].

>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172

Probab=95.25  E-value=0.19  Score=50.12  Aligned_cols=104  Identities=11%  Similarity=0.009  Sum_probs=73.4

Q ss_pred             EEeccCCceEEEEEEECCCCcEEEEEEEecChhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEEEEEEecCC
Q 008813          420 EYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCELLR  499 (552)
Q Consensus       420 e~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hLyIVmEll~  499 (552)
                      ..||+|.-+.||++    .+..+++|+..... ......+|.++++.+... .   -.+++.+.+....+...+|||++.
T Consensus         7 ~~i~~G~t~~~y~~----~~~~~VlR~~~~~~-~~~~i~~E~~~l~~l~~~-g---lpvP~~~~~~~~~~~~glv~e~i~   77 (226)
T TIGR02172         7 TQTGEGGNGESYTH----KTGKWMLKLYNPGF-DKETIKREFDASRKVFSL-G---IPTPHPFDLVEDGGRLGLIYELIV   77 (226)
T ss_pred             eeecCCCCcceeEe----cCCCEEEEeCCCCC-CHHHHHHHHHHHHHHHHc-C---CCCCceEEEEecCCeeeeeeeecC
Confidence            47899999999984    24456788876532 234578999999999862 0   234667777777777899999999


Q ss_pred             C-C-HHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCC
Q 008813          500 A-N-LYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLV  542 (552)
Q Consensus       500 G-s-L~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gI  542 (552)
                      | . +...+.          .+......++.+++..|.-||+..+
T Consensus        78 G~~~~~~~~~----------~~~~~~~~l~~~la~~l~~lH~~~~  112 (226)
T TIGR02172        78 GKRSFSRIIS----------DNPSRLEEIAKIFAEMAKKLHSTKC  112 (226)
T ss_pred             Cccchhhhhc----------CCHHHHHHHHHHHHHHHHHHhCCCC
Confidence            9 3 433322          2445556788888999999997543

This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.

>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2

Probab=95.24  E-value=0.34  Score=48.53  Aligned_cols=114  Identities=14%  Similarity=0.124  Sum_probs=80.4

Q ss_pred             CceEEEEEeccCCc-eEEEEEEECCCCcEEEEEEEecC------------h----------hhHHHHHHHHHHHHHhccc
Q 008813          414 GRYYVTEYLGSAAF-SKVFQAQDLHTGVDVCLKIIKND------------K----------DFFDQSLDEIKLLKLVNKN  470 (552)
Q Consensus       414 ~RY~Ile~LGkG~F-G~VykA~Dkktg~~VAVKIIk~s------------k----------~~~~~~lrEIkILk~L~hh  470 (552)
                      ..++.++.||.|.- |.||++.-  .|+.||||+.+..            .          .+..-+..|.+...+|+..
T Consensus        37 ~~I~flefLg~g~~~~~V~kv~I--~g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke~  114 (207)
T PF13095_consen   37 DDIEFLEFLGHGSHDGYVFKVEI--DGRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKEA  114 (207)
T ss_pred             CcEeeeeecCCCCceeEEEEEEE--CCeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHhc
Confidence            56899999999999 99999986  5779999994320            0          1234577899999988873


Q ss_pred             CCCCCCCe--eEeEeEEEeC------------------CEEEEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHH
Q 008813          471 DPADEHHI--LRLYDYFYHL------------------EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFL  530 (552)
Q Consensus       471 d~~d~pnI--VrL~d~F~~~------------------~hLyIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QI  530 (552)
                         ++.++  |+.++|+.-.                  ....||.||....-        .      ++...    +.+|
T Consensus       115 ---~~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~--------~------~~~~~----~~~~  173 (207)
T PF13095_consen  115 ---GREGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP--------P------LQIRD----IPQM  173 (207)
T ss_pred             ---cccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc--------c------cchhH----HHHH
Confidence               33566  8888887422                  12466777655422        0      33333    4566


Q ss_pred             HHHHHHHHhCCCeeeecccc
Q 008813          531 LTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       531 L~AL~YLHs~gIIH~~L~~~  550 (552)
                      +.-|..+|..||+=+|++..
T Consensus       174 ~~dl~~~~k~gI~~~Dv~~~  193 (207)
T PF13095_consen  174 LRDLKILHKLGIVPRDVKPR  193 (207)
T ss_pred             HHHHHHHHHCCeeeccCccc
Confidence            77788999999999998864

>KOG1266 consensus Protein kinase [Signal transduction mechanisms]

Probab=95.12  E-value=0.02  Score=61.05  Aligned_cols=73  Identities=15%  Similarity=0.218  Sum_probs=59.5

Q ss_pred             CCeeEeEeEEEeCC-----EEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCC--Ceeeec
Q 008813          476 HHILRLYDYFYHLE-----HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLL--VIYFIL  547 (552)
Q Consensus       476 pnIVrL~d~F~~~~-----hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~g--IIH~~L  547 (552)
                      .|||+++.+|.+..     ...+++|||.. +|.++|++.+...  +.+.....+.|+.||+.||.|||+.-  |||--|
T Consensus       127 snlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~--~a~~~~~wkkw~tqIlsal~yLhs~~Ppiihgnl  204 (458)
T KOG1266|consen  127 SNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQ--KALFQKAWKKWCTQILSALSYLHSCDPPIIHGNL  204 (458)
T ss_pred             HHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhh--hhhhHHHHHHHHHHHHhhhhhhhccCCccccCCc
Confidence            68999998887553     47888999986 9999998765443  23788888999999999999999874  899888


Q ss_pred             ccc
Q 008813          548 FCF  550 (552)
Q Consensus       548 ~~~  550 (552)
                      -|-
T Consensus       205 Tc~  207 (458)
T KOG1266|consen  205 TCD  207 (458)
T ss_pred             chh
Confidence            774

>PRK10593 hypothetical protein; Provisional

Probab=95.06  E-value=0.19  Score=52.08  Aligned_cols=108  Identities=12%  Similarity=0.111  Sum_probs=74.6

Q ss_pred             eEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEe---CCEEE
Q 008813          416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH---LEHLF  492 (552)
Q Consensus       416 Y~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~---~~hLy  492 (552)
                      -.-.+.||.|..+.||+..+.. + .+.+|+.+.. .....+..|...|+.|....   ...|++.++.+..   .+.-+
T Consensus        16 ~~~~~~i~~G~~~~vy~~~~~~-~-~~~~k~~~~~-~~~~~~~~Ea~~L~~L~~~~---~vpVP~V~~~~~~~~~~g~~~   89 (297)
T PRK10593         16 LSRVECISEQPYAALWALYDSQ-G-NPMPLMARSF-STPGVAQQEAWKLSMLARSG---TVRMPTVYGVMTHEQSPGPDV   89 (297)
T ss_pred             hheeeecCCccceeEEEEEcCC-C-CEEEEEeccc-ccchHHHHHHHHHHHHccCC---CCCcCcEEEEeccCCcCCCeE
Confidence            3445789999999999886432 3 3666775431 12357889999999997621   1356777766643   46689


Q ss_pred             EEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhC
Q 008813          493 IVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLL  540 (552)
Q Consensus       493 IVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~  540 (552)
                      ||||++.+ ++.+.     .      .+......+..+++.+|.-||+.
T Consensus        90 LVmE~i~G~~~~~~-----~------~~~~~~~~l~~~l~~~La~LH~~  127 (297)
T PRK10593         90 LLLERLRGVSVEAP-----A------RTPERWEQLKDQIVEGLLAWHRI  127 (297)
T ss_pred             EEEeccCCEecCCC-----C------CCHHHHHHHHHHHHHHHHHHhCC
Confidence            99999998 66541     0      23444566778889999999975

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=94.92  E-value=0.18  Score=49.57  Aligned_cols=99  Identities=11%  Similarity=0.063  Sum_probs=67.9

Q ss_pred             eccCCc-eEEEEEEECCCCcEEEEEEEecChhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEEEEEEecCCC
Q 008813          422 LGSAAF-SKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCELLRA  500 (552)
Q Consensus       422 LGkG~F-G~VykA~Dkktg~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hLyIVmEll~G  500 (552)
                      |-.|.. ..||+....  +..+.||+.....  .....+|+++++.+..+     --+++++.+....+.-+||||++.|
T Consensus         6 ~~~g~~~~~v~~~~~~--~~~~~vk~~~~~~--~~~~~~E~~~l~~l~~~-----~~vP~v~~~~~~~~~~~lv~e~i~G   76 (244)
T cd05150           6 VTEGQSGATVYRLDGK--NPGLYLKIAPSGP--TYELEREAERLRWLAGK-----LPVPEVIDYGSDDGRAWLLTSAVPG   76 (244)
T ss_pred             cCCCCCcCeEEEEcCC--CCcEEEEecCCCc--ccchHHHHHHHHHHHhc-----CCCCeEEEEEecCCccEEEEEeeCC
Confidence            344444 778988653  3578888876542  34567899999999863     3466777777766778999999999


Q ss_pred             -CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCC
Q 008813          501 -NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLL  541 (552)
Q Consensus       501 -sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~g  541 (552)
                       .|......         .   ....++.|+...|.-||+..
T Consensus        77 ~~l~~~~~~---------~---~~~~~~~~l~~~l~~lH~i~  106 (244)
T cd05150          77 VPAAALWEE---------L---EPERLVDALAEALRRLHALP  106 (244)
T ss_pred             ccHhHhhcc---------c---CHHHHHHHHHHHHHHHhcCC
Confidence             66543210         1   12357788888899999753

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]

Probab=94.86  E-value=0.042  Score=61.10  Aligned_cols=70  Identities=6%  Similarity=-0.081  Sum_probs=61.4

Q ss_pred             CCeeEeEeEEEeCCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCC-eeeecccc
Q 008813          476 HHILRLYDYFYHLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLV-IYFILFCF  550 (552)
Q Consensus       476 pnIVrL~d~F~~~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gI-IH~~L~~~  550 (552)
                      .|+.++++....+..+++|.+||.. +|.+.+......     ++..-...+++.|+.||.|||.-.| .|--|+..
T Consensus         7 ~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~~~-----~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~   78 (484)
T KOG1023|consen    7 DNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNEDIK-----LDYFFILSFIRDISKGLAYLHNSPIGYHGALKSS   78 (484)
T ss_pred             hhhhhheeeEecCCceEEEEeeecCccHHhHHhccccC-----ccHHHHHHHHHHHHHHHHHHhcCcceeeeeeccc
Confidence            8999999999999999999999976 999999874432     7788888999999999999998776 89888764

>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]

Probab=94.37  E-value=0.23  Score=54.17  Aligned_cols=115  Identities=16%  Similarity=0.142  Sum_probs=79.2

Q ss_pred             EEeccCCceEEEEEEECCCCcEEEEEEEecC---------------------------hhhHHHHHHHHHHHHHhcccCC
Q 008813          420 EYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---------------------------KDFFDQSLDEIKLLKLVNKNDP  472 (552)
Q Consensus       420 e~LGkG~FG~VykA~Dkktg~~VAVKIIk~s---------------------------k~~~~~~lrEIkILk~L~hhd~  472 (552)
                      ..|..|.=+.||.|.. ..|..+||||.+.+                           +...-.+..|++-|++|+.. .
T Consensus       150 GCiSTGKEANVYHat~-~dG~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RNLkRl~~a-G  227 (520)
T KOG2270|consen  150 GCISTGKEANVYHATE-EDGSEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRNLKRLNNA-G  227 (520)
T ss_pred             cccccCccceeEeeec-CCCceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHHHHHHHhc-C
Confidence            3677888899999865 46778999998642                           11123467899999999872 2


Q ss_pred             CCCCCeeEeEeEEEeCCEEEEEEecCCCC--HHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHH-hCCCeeeeccc
Q 008813          473 ADEHHILRLYDYFYHLEHLFIVCELLRAN--LYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIF-LLLVIYFILFC  549 (552)
Q Consensus       473 ~d~pnIVrL~d~F~~~~hLyIVmEll~Gs--L~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLH-s~gIIH~~L~~  549 (552)
                      ..+|--|-|.       ...|||+|++.+  -.-.|+..       .++...+..+-.|++.-|.-|- .+++||-||-=
T Consensus       228 IP~PePIlLk-------~hVLVM~FlGrdgw~aPkLKd~-------~ls~~ka~~~Y~~~v~~MR~lY~~c~LVHADLSE  293 (520)
T KOG2270|consen  228 IPCPEPILLK-------NHVLVMEFLGRDGWAAPKLKDA-------SLSTSKARELYQQCVRIMRRLYQKCRLVHADLSE  293 (520)
T ss_pred             CCCCCceeee-------cceEeeeeccCCCCcCcccccc-------cCChHHHHHHHHHHHHHHHHHHHHhceeccchhh
Confidence            2223222221       247999999873  22334432       2788889999999999988775 67999999854


Q ss_pred             c
Q 008813          550 F  550 (552)
Q Consensus       550 ~  550 (552)
                      |
T Consensus       294 f  294 (520)
T KOG2270|consen  294 F  294 (520)
T ss_pred             h
Confidence            4

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=94.15  E-value=0.27  Score=55.26  Aligned_cols=121  Identities=14%  Similarity=0.088  Sum_probs=69.2

Q ss_pred             EEeccCCceEEEEEEECCCCcEEEEEEEecChh-----------------------------------hHHH------HH
Q 008813          420 EYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD-----------------------------------FFDQ------SL  458 (552)
Q Consensus       420 e~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~-----------------------------------~~~~------~l  458 (552)
                      ..|+.++-|+||+|+.+. |+.|||||.+.+-.                                   +.+.      ..
T Consensus       131 ~PiAsASIaQVH~A~L~s-G~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~  209 (517)
T COG0661         131 EPIASASIAQVHRAVLKS-GEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYR  209 (517)
T ss_pred             CchhhhhHhhheeEEecC-CCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHH
Confidence            578999999999998764 99999999976300                                   0111      23


Q ss_pred             HHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHH
Q 008813          459 DEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLI  537 (552)
Q Consensus       459 rEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YL  537 (552)
                      +|...+.+++.+-+ +.+.|.--.=++.....-.|+|||+.| .+.++..... .+    ++.+.+.....++.  +.-+
T Consensus       210 ~EA~n~~~~~~nf~-~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~-~g----~d~k~ia~~~~~~f--~~q~  281 (517)
T COG0661         210 REAANAERFRENFK-DDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKS-AG----IDRKELAELLVRAF--LRQL  281 (517)
T ss_pred             HHHHHHHHHHHHcC-CCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHHh-cC----CCHHHHHHHHHHHH--HHHH
Confidence            55556666554322 223333222233344567899999999 7777643222 12    44333222222111  2223


Q ss_pred             HhCCCeeeeccc
Q 008813          538 FLLLVIYFILFC  549 (552)
Q Consensus       538 Hs~gIIH~~L~~  549 (552)
                      -..|++|-|+.+
T Consensus       282 ~~dgffHaDpHp  293 (517)
T COG0661         282 LRDGFFHADPHP  293 (517)
T ss_pred             HhcCccccCCCc
Confidence            347888888754

>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY)

Probab=93.15  E-value=0.48  Score=48.12  Aligned_cols=128  Identities=8%  Similarity=-0.006  Sum_probs=79.3

Q ss_pred             CcceeeCceecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChh----hH------HHHHHHHHHHHHhcccCC
Q 008813          403 DLPIILNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD----FF------DQSLDEIKLLKLVNKNDP  472 (552)
Q Consensus       403 ~y~v~~gdvi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~----~~------~~~lrEIkILk~L~hhd~  472 (552)
                      .|.-...+.+.+.|.+++.+-......|.+-.-  .++.+.+|..+..-.    ..      ....+++..+..+...  
T Consensus        20 ~y~~l~~~i~~~~~~~~kv~k~~~r~~ValIei--~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~--   95 (229)
T PF06176_consen   20 KYLELGEKILDNNYKIIKVFKNTKRNYVALIEI--DGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNE--   95 (229)
T ss_pred             HHHHHHHHHHhCCceEEEeecCCCccEEEEEEE--CCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHc--
Confidence            344444557778999999998887777766643  567889998765311    11      1234555555555441  


Q ss_pred             CCCCCeeEeEeEEE-----eCCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeee
Q 008813          473 ADEHHILRLYDYFY-----HLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFI  546 (552)
Q Consensus       473 ~d~pnIVrL~d~F~-----~~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~  546 (552)
                       +...+..++-+..     .....+|||||++| .|.++..          +++.    +...|+++|.-||..|+.|-|
T Consensus        96 -g~~~~~~~yl~~ekk~~~~~~~~~ll~EYIeG~~l~d~~~----------i~e~----~~~ki~~~ikqlH~~G~~HGD  160 (229)
T PF06176_consen   96 -GFTEPADPYLAAEKKIFRYTSSYVLLMEYIEGVELNDIED----------IDED----LAEKIVEAIKQLHKHGFYHGD  160 (229)
T ss_pred             -CccccccceeeeeeeeccceeEEEEEEEEecCeecccchh----------cCHH----HHHHHHHHHHHHHHcCCccCC
Confidence             1112222222222     22446799999999 7766532          3332    445667788999999999999


Q ss_pred             ccc
Q 008813          547 LFC  549 (552)
Q Consensus       547 L~~  549 (552)
                      ..+
T Consensus       161 ~hp  163 (229)
T PF06176_consen  161 PHP  163 (229)
T ss_pred             CCc
Confidence            865

The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process

>PRK09550 mtnK methylthioribose kinase; Reviewed

Probab=92.73  E-value=1.3  Score=48.40  Aligned_cols=86  Identities=23%  Similarity=0.207  Sum_probs=61.2

Q ss_pred             EEEeccCCceEEEEEEECCCCcEEEEEEEecC--------hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCE
Q 008813          419 TEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND--------KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH  490 (552)
Q Consensus       419 le~LGkG~FG~VykA~Dkktg~~VAVKIIk~s--------k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~h  490 (552)
                      .+.||.|.+..||+..+...++.+.||.-...        +...++...|.+.|+.+....+   .++++++.+  ..+.
T Consensus        31 ~~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p---~~VPkV~~~--D~~~  105 (401)
T PRK09550         31 AREIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVP---DLVPKVYHY--DEEL  105 (401)
T ss_pred             eeEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCC---CCCCeEEEE--CCCC
Confidence            35789999999999998654468999984311        2234677889999998765322   467788766  4466


Q ss_pred             EEEEEecCCC--CHHHHHHhh
Q 008813          491 LFIVCELLRA--NLYEFQKFN  509 (552)
Q Consensus       491 LyIVmEll~G--sL~d~Lk~~  509 (552)
                      .++|||++++  .|.+.+...
T Consensus       106 ~~lVME~L~~~~~lr~~Ll~g  126 (401)
T PRK09550        106 AVTVMEDLSDHKILRKGLIDG  126 (401)
T ss_pred             CEEEEecCCCccHHHHHHhcC
Confidence            7899999987  465555543

>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes

Probab=92.70  E-value=0.62  Score=45.41  Aligned_cols=101  Identities=13%  Similarity=0.167  Sum_probs=63.0

Q ss_pred             EEEeccCCceEEEEEEECC-CCcEEEEEEEecChhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEEEEEEec
Q 008813          419 TEYLGSAAFSKVFQAQDLH-TGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCEL  497 (552)
Q Consensus       419 le~LGkG~FG~VykA~Dkk-tg~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hLyIVmEl  497 (552)
                      ++.|..|-...||++.... .++.|.+|+........-...+|+.+++.+...     .-+++++..+.  +  .+||||
T Consensus         3 i~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~~~~~d~~~E~~~~~~l~~~-----gl~P~v~~~~~--~--~~l~e~   73 (235)
T cd05157           3 FKRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKTELIIDRERELRIHKLLSKH-----GLAPKLYATFQ--N--GLIYEF   73 (235)
T ss_pred             EEEcCCcccceEEEEEcCCCCCCeEEEEEccCCccceecHHHHHHHHHHHHhC-----CCCCeEEEEeC--C--cEEEEe
Confidence            3567777788999886543 356788997764322212234799999999763     22445554332  2  389999


Q ss_pred             CCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCC
Q 008813          498 LRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLV  542 (552)
Q Consensus       498 l~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gI  542 (552)
                      +.| +|....           +.   -..++.++++.|.-||+...
T Consensus        74 i~G~~l~~~~-----------~~---~~~~~~~la~~l~~lH~~~~  105 (235)
T cd05157          74 IPGRTLEPED-----------LR---NPKIYRLIARELAKLHSIKP  105 (235)
T ss_pred             eCCCcCCHHH-----------cc---ChHHHHHHHHHHHHHhcccc
Confidence            998 443210           11   12356778888999997653

ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo

>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]

Probab=92.49  E-value=0.037  Score=61.53  Aligned_cols=123  Identities=12%  Similarity=-0.009  Sum_probs=75.1

Q ss_pred             ceEEEEEeccCCceEEEEEEECCC---CcEEEEEEEecCh-hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEe-------
Q 008813          415 RYYVTEYLGSAAFSKVFQAQDLHT---GVDVCLKIIKNDK-DFFDQSLDEIKLLKLVNKNDPADEHHILRLYD-------  483 (552)
Q Consensus       415 RY~Ile~LGkG~FG~VykA~Dkkt---g~~VAVKIIk~sk-~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d-------  483 (552)
                      .+.+.+.++..+++.++..+-...   .+.+.-+...... .......+++-.+....|+     +..+ +.+       
T Consensus       245 s~~~~k~~~~~~~~~~~~~q~~~~~s~~E~~~s~~~~~d~~~~~~~~~r~~~~l~~~~~~-----~~s~-~~d~~~s~~~  318 (516)
T KOG1033|consen  245 SSSISKSSERVSSGIVFEKQGKNNSSLREWLKSKRADVDSLCACKYTFRQLGVLVDSSHS-----NRSI-LEDLRPSLFE  318 (516)
T ss_pred             cccccccccccccCCchhhhhcccchhhhhccchhhhccchhhhhhhhhhhhheeccccC-----Cccc-ccCCCCchhh
Confidence            445555666666666655443322   2333333333322 2223445566666555553     2222 222       


Q ss_pred             EEE-----eCCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          484 YFY-----HLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       484 ~F~-----~~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      .+.     ...++||.|++|.. +|.+||+.+...-   -.+....+.++.|+..|++|   ++.||++||+
T Consensus       319 ~~~~~~v~~~~~lyI~Mn~c~~~tledWl~rr~~~e---~~s~s~~~~~~~q~~~~~~y---k~~ihrdlkp  384 (516)
T KOG1033|consen  319 SSKRNKVGKKVYLYIQMNLCEKETLEDWLRRRRTGE---ERSLSLMLDIFKQIAPAVEY---KGLIHRDLKP  384 (516)
T ss_pred             hccccccccccchhhhhhhhhhhhHHHHhhCCCccc---ccchhHHHHHHHhhccchhh---ccchhhhccc
Confidence            111     13469999999998 9999998554321   15778889999999999999   9999999986

>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]

Probab=92.30  E-value=0.69  Score=52.35  Aligned_cols=30  Identities=27%  Similarity=0.402  Sum_probs=25.9

Q ss_pred             EEeccCCceEEEEEEECCCCcEEEEEEEecC
Q 008813          420 EYLGSAAFSKVFQAQDLHTGVDVCLKIIKND  450 (552)
Q Consensus       420 e~LGkG~FG~VykA~Dkktg~~VAVKIIk~s  450 (552)
                      +.||..+.|+|++|+-+. |+.||||+.+..
T Consensus       167 ~piaaASlaQVhrA~L~~-G~~VaVKVQ~P~  196 (538)
T KOG1235|consen  167 EPIAAASLAQVHRARLKN-GEDVAVKVQHPG  196 (538)
T ss_pred             chhhhcchhheEEEEecC-CCEEEEEecCcC
Confidence            478999999999998765 999999998753

>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members

Probab=89.59  E-value=1.2  Score=43.90  Aligned_cols=101  Identities=12%  Similarity=0.024  Sum_probs=62.6

Q ss_pred             EEeccCCceE-EEEEEECCCCcEEEEEEEecChhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeC---CEEEEEE
Q 008813          420 EYLGSAAFSK-VFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL---EHLFIVC  495 (552)
Q Consensus       420 e~LGkG~FG~-VykA~Dkktg~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~---~hLyIVm  495 (552)
                      +.|+.|+... ||+..     ..+.+|+.+.. .....+.+|.++|..|..+-+   --+++.+......   ...|+||
T Consensus         3 ~~~~~gG~~n~vy~~~-----~~~VlR~~~~~-~~~~~~~~E~~~l~~L~~~~~---v~vP~~~~~~~~~~~~~~~~~l~   73 (235)
T cd05155           3 EPVDSGGTDNATFRLG-----DDMSVRLPSAA-GYAGQVRKEQRWLPRLAPHLP---LPVPEPLGKGEPGEGYPWPWSVY   73 (235)
T ss_pred             eeccCCCcccceEEcC-----CceEEEcCCcc-chHHHHHHHHHHHHHHhccCC---CCCCceeecCCCccCCCcceEEE
Confidence            4677777764 88762     24667865542 234578899999999975211   1334444333222   2458999


Q ss_pred             ecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCC
Q 008813          496 ELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLV  542 (552)
Q Consensus       496 Ell~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gI  542 (552)
                      +++.| ++.+..           +..  ...++.++.+.|.-||+..+
T Consensus        74 ~~i~G~~l~~~~-----------~~~--~~~l~~~la~~l~~LH~i~~  108 (235)
T cd05155          74 RWLEGETATAAA-----------LSD--PSEFAEDLADFLAALRQIDP  108 (235)
T ss_pred             EeecCCCCCccc-----------cCC--HHHHHHHHHHHHHHHhCCCc
Confidence            99999 665431           121  22577888888889997643

The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=88.62  E-value=0.047  Score=65.12  Aligned_cols=126  Identities=14%  Similarity=-0.026  Sum_probs=92.3

Q ss_pred             CceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChhhH----HHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCC
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFF----DQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE  489 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~~~----~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~  489 (552)
                      ..+.+++-+-+|+++.++.+.-..++...++|+........    +.+.++-.++....+      |-+++....|....
T Consensus       804 d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~------P~v~~~~~s~~~rs  877 (1205)
T KOG0606|consen  804 DGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRS------PAVVRSFPSFPCRS  877 (1205)
T ss_pred             ccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCC------CceecccCCCCCCC
Confidence            45777788999999999999877777666777665433222    223333333333333      66666665566778


Q ss_pred             EEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccccC
Q 008813          490 HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCFS  551 (552)
Q Consensus       490 hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~~  551 (552)
                      .++|||+|+++ +|...|..-.-      .+..-++.++..++.+++|||...++|++|++-+
T Consensus       878 P~~L~~~~~~~~~~~Skl~~~~~------~saepaRs~i~~~vqs~e~L~s~~r~h~~~~p~~  934 (1205)
T KOG0606|consen  878 PLPLVGHYLNGGDLPSKLHNSGC------LSAEPARSPILERVQSLESLHSSLRKHRDLKPDS  934 (1205)
T ss_pred             CcchhhHHhccCCchhhhhcCCC------cccccccchhHHHHhhhhccccchhhcccccccc
Confidence            89999999987 89988886542      6777788889999999999999999999998743

>PF03109 ABC1: ABC1 family; InterPro: IPR004147 This entry includes ABC1 from yeast [] and AarF from Escherichia coli []

Probab=88.55  E-value=0.28  Score=44.43  Aligned_cols=46  Identities=24%  Similarity=0.370  Sum_probs=34.7

Q ss_pred             EEeccCCceEEEEEEECCCCcEEEEEEEecChhhHHHHHHHHHHHHHhc
Q 008813          420 EYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVN  468 (552)
Q Consensus       420 e~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~~~~~~lrEIkILk~L~  468 (552)
                      ..||.|+.|+||+|+.+ +|+.||||+.+..  ..+.+...+.+|+.+-
T Consensus        17 ~PlasASiaQVh~a~l~-~g~~VaVKV~rP~--i~~~i~~Dl~~l~~~~   62 (119)
T PF03109_consen   17 EPLASASIAQVHRARLK-DGEEVAVKVQRPG--IEEQIEADLRILRRLA   62 (119)
T ss_pred             chhhheehhhheeeeec-ccchhhhhhcchH--HHHHHHHHHHHHHHHH
Confidence            47999999999999765 4999999999854  3355556666665544

These proteins have a nuclear or mitochondrial subcellular location in eukaryotes. The exact molecular functions of these proteins is not clear, however yeast ABC1 suppresses a cytochrome b mRNA translation defect and is essential for the electron transfer in the bc 1 complex [] and E. coli AarF is required for ubiquinone production []. It has been suggested that members of the ABC1 family are novel chaperonins []. These proteins are unrelated to the ABC transporter proteins.

>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes

Probab=84.10  E-value=3.8  Score=41.68  Aligned_cols=100  Identities=11%  Similarity=0.113  Sum_probs=61.9

Q ss_pred             EEeccCCceEEEEEEECC------CCcEEEEEEEecChhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEEEE
Q 008813          420 EYLGSAAFSKVFQAQDLH------TGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFI  493 (552)
Q Consensus       420 e~LGkG~FG~VykA~Dkk------tg~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hLyI  493 (552)
                      +.|..|--..||+.....      +++.+.+|+............+|.++++.+...     .-.++++.++.  +  .+
T Consensus         4 ~~l~gGltN~~y~v~~~~~~~~~~~~~~~vlRi~~~~~~~~~~r~~E~~~~~~l~~~-----g~~P~~~~~~~--~--~~   74 (302)
T cd05156           4 SKISGGLTNAVYKVSLPDEDALSDEPRKVLLRVYGQSVELLIDRERELVVFARLSER-----NLGPKLYGIFP--N--GR   74 (302)
T ss_pred             EEecCcccceeEEEEcCCcccccCCCCeEEEEEecCCCcceechHHHHHHHHHHHhC-----CCCCceEEEeC--C--Cc
Confidence            345545555777776432      357889999766433334567899999999873     12345555443  2  36


Q ss_pred             EEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCC
Q 008813          494 VCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLV  542 (552)
Q Consensus       494 VmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gI  542 (552)
                      ||||+.| .+....           +.   -..++.+++..|..||+..+
T Consensus        75 v~e~i~G~~l~~~~-----------~~---~~~~~~~ia~~L~~lH~~~~  110 (302)
T cd05156          75 IEEFIPSRTLTTEE-----------LR---DPDISAEIARRMAKLHSIVV  110 (302)
T ss_pred             hhheeCCCcCCHhH-----------cC---CcHHHHHHHHHHHHhhCCCC
Confidence            8899888 443320           11   02367788999999998653

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer

>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]

Probab=80.76  E-value=1  Score=48.62  Aligned_cols=112  Identities=16%  Similarity=0.153  Sum_probs=76.1

Q ss_pred             eEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC----------hhh-------------HHHHHHHHHHHHHhcccCC
Q 008813          416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND----------KDF-------------FDQSLDEIKLLKLVNKNDP  472 (552)
Q Consensus       416 Y~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s----------k~~-------------~~~~lrEIkILk~L~hhd~  472 (552)
                      +.+...||-|.=+-||.+-+. .|++.++|+.+..          +.+             +-.+.+|...|+.|..+. 
T Consensus        94 ~svGnqIGVGKESDIY~v~d~-~G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRlaa~kEfafmkaL~e~g-  171 (465)
T KOG2268|consen   94 ESVGNQIGVGKESDIYVVADE-EGNPLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLAATKEFAFMKALYERG-  171 (465)
T ss_pred             hhhccccccccccceEEEecC-CCCchhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHHHHHHHHHHHHHHHHcC-
Confidence            678899999999999999775 5788899976532          111             124678999999987631 


Q ss_pred             CCCCCeeEeEeEEEeCCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecc
Q 008813          473 ADEHHILRLYDYFYHLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILF  548 (552)
Q Consensus       473 ~d~pnIVrL~d~F~~~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~  548 (552)
                         --|++-+++    +..|+|||++.| .|.++-.            ...+..+...++.-+.-|-.+|+||-|.-
T Consensus       172 ---fpVPkpiD~----~RH~Vvmelv~g~Pl~~v~~------------v~d~~~ly~~lm~~Iv~la~~GlIHgDFN  229 (465)
T KOG2268|consen  172 ---FPVPKPIDH----NRHCVVMELVDGYPLRQVRH------------VEDPPTLYDDLMGLIVRLANHGLIHGDFN  229 (465)
T ss_pred             ---CCCCCcccc----cceeeHHHhhcccceeeeee------------cCChHHHHHHHHHHHHHHHHcCceecccc
Confidence               123344433    346899999998 7766422            12233455556666677899999998754

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	552
3anq_A	368	Human Dyrk1aINHIBITOR COMPLEX Length = 368		1e-10
2vx3_A	382	Crystal Structure Of The Human Dual Specificity Tyr		1e-10
4aze_A	382	Human Dyrk1a In Complex With Leucettine L41 Length		1e-10
3kvw_A	429	Crystal Structure Of Dual-Specificity Tyrosine Phos		2e-10
4azf_A	417	Human Dyrk2 In Complex With Leucettine L41 Length =		2e-10
3k2l_A	429	Crystal Structure Of Dual-Specificity Tyrosine Phos		3e-10
1how_A	373	The X-Ray Crystal Structure Of Sky1p, An Sr Protein		1e-09
1q8y_A	373	The Structure Of The Yeast Sr Protein Kinase, Sky1p		1e-09
1z57_A	339	Crystal Structure Of Human Clk1 In Complex With 10z		1e-08
2vag_A	339	Crystal Structure Of Di-Phosphorylated Human Clk1 I		1e-08
2x7g_A	389	Structure Of Human Serine-Arginine-Rich Protein-Spe		2e-08
3nr9_A	368	Structure Of Human Cdc2-Like Kinase 2 (Clk2) Length		2e-07
1wbp_A	397	Srpk1 Bound To 9mer Docking Motif Peptide Length =		3e-07
3beg_A	381	Crystal Structure Of Sr Protein Kinase 1 Complexed		4e-07
2wu6_A	381	Crystal Structure Of The Human Clk3 In Complex With		3e-05
2eu9_A	355	Crystal Structure Of Clk3 Length = 355		4e-05
2exe_A	357	Crystal Structure Of The Phosphorylated Clk3 Length		4e-05

>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX Length = 368

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 34/93 (36%), Positives = 56/93 (60%)
Query: 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPAD 474
           RY +   +G  +F +V +A D      V +KIIKN K F +Q+  E++LL+L+NK+D   
Sbjct: 36  RYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEM 95
Query: 475 EHHILRLYDYFYHLEHLFIVCELLRANLYEFQK 507
           +++I+ L  +F    HL +V E+L  NLY+  +
Sbjct: 96  KYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLR 128

>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine- Phosphorylation-Regulated Kinase 1a Length = 382

Iteration: 1
 Score = 64.7 bits (156), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 34/93 (36%), Positives = 56/93 (60%)
Query: 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPAD 474
           RY +   +G  +F +V +A D      V +KIIKN K F +Q+  E++LL+L+NK+D   
Sbjct: 55  RYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEM 114
Query: 475 EHHILRLYDYFYHLEHLFIVCELLRANLYEFQK 507
           +++I+ L  +F    HL +V E+L  NLY+  +
Sbjct: 115 KYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLR 147

>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41 Length = 382

Iteration: 1
 Score = 64.7 bits (156), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 34/93 (36%), Positives = 56/93 (60%)
Query: 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPAD 474
           RY +   +G  +F +V +A D      V +KIIKN K F +Q+  E++LL+L+NK+D   
Sbjct: 55  RYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEM 114
Query: 475 EHHILRLYDYFYHLEHLFIVCELLRANLYEFQK 507
           +++I+ L  +F    HL +V E+L  NLY+  +
Sbjct: 115 KYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLR 147

>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex With An Indirubin Ligand Length = 429

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 33/102 (32%), Positives = 58/102 (56%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKND 471
           +A RY V + +G  +F +V +A D      V LK+++N+K F  Q+ +EI++L+ + K D
Sbjct: 95  VAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQD 154
Query: 472 PADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESG 513
             +  +++ + + F    H+ +  ELL  NLYE  K N+  G
Sbjct: 155 KDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQG 196

>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41 Length = 417

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 33/102 (32%), Positives = 58/102 (56%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKND 471
           +A RY V + +G  +F +V +A D      V LK+++N+K F  Q+ +EI++L+ + K D
Sbjct: 95  VAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQD 154
Query: 472 PADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESG 513
             +  +++ + + F    H+ +  ELL  NLYE  K N+  G
Sbjct: 155 KDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQG 196

>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine Phosphorylation Regulated Kinase 2 (Dyrk2) Length = 429

Iteration: 1
 Score = 63.5 bits (153), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 33/102 (32%), Positives = 57/102 (55%)
Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKND 471
           +A RY V + +G   F +V +A D      V LK+++N+K F  Q+ +EI++L+ + K D
Sbjct: 95  VAYRYEVLKVIGKGXFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQD 154
Query: 472 PADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESG 513
             +  +++ + + F    H+ +  ELL  NLYE  K N+  G
Sbjct: 155 KDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQG 196

>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase In Yeast Length = 373

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 39/109 (35%), Positives = 57/109 (52%), Gaps = 9/109 (8%)
Query: 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVN----- 468
            RY +   LG   FS V+ A+D+     V +KI++ DK + + + DEIKLL+ VN     
Sbjct: 19  ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNT 78
Query: 469 KNDPADEHHILRLYDYFYHLE----HLFIVCELLRANLYEFQKFNQESG 513
           K D    +HIL+L D+F H      H+ +V E+L  NL    K  +  G
Sbjct: 79  KEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRG 127

>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With Bound Adp Length = 373

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 39/109 (35%), Positives = 57/109 (52%), Gaps = 9/109 (8%)
Query: 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVN----- 468
            RY +   LG   FS V+ A+D+     V +KI++ DK + + + DEIKLL+ VN     
Sbjct: 19  ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNT 78
Query: 469 KNDPADEHHILRLYDYFYHLE----HLFIVCELLRANLYEFQKFNQESG 513
           K D    +HIL+L D+F H      H+ +V E+L  NL    K  +  G
Sbjct: 79  KEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRG 127

>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With 10z-Hymenialdisine Length = 339

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 34/100 (34%), Positives = 56/100 (56%), Gaps = 1/100 (1%)
Query: 411 VIAGRYYVTEYLGSAAFSKVFQAQDLHTG-VDVCLKIIKNDKDFFDQSLDEIKLLKLVNK 469
           V++ RY + + LG  AF KV +  D   G   V +KI+KN   + + +  EI++L+ +N 
Sbjct: 11  VLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNT 70
Query: 470 NDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFN 509
            DP      +++ ++F H  H+ IV ELL  + Y+F K N
Sbjct: 71  TDPNSTFRCVQMLEWFEHHGHICIVFELLGLSTYDFIKEN 110

>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In Complex With A Novel Substituted Indole Inhibitor Length = 339

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 34/100 (34%), Positives = 56/100 (56%), Gaps = 1/100 (1%)
Query: 411 VIAGRYYVTEYLGSAAFSKVFQAQDLHTG-VDVCLKIIKNDKDFFDQSLDEIKLLKLVNK 469
           V++ RY + + LG  AF KV +  D   G   V +KI+KN   + + +  EI++L+ +N 
Sbjct: 11  VLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNT 70
Query: 470 NDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFN 509
            DP      +++ ++F H  H+ IV ELL  + Y+F K N
Sbjct: 71  TDPNSTFRCVQMLEWFEHHGHICIVFELLGLSTYDFIKEN 110

>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific Kinase 2 (Srpk2) Bound To Purvalanol B Length = 389

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 62/107 (57%), Gaps = 6/107 (5%)
Query: 405 PIILNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLL 464
           P+ +  +  GRY+V   LG   FS V+   D+     V +K++K+ + + + +LDEIKLL
Sbjct: 22  PVKIGDLFNGRYHVIRKLGWGHFSTVWLCWDMQGKRFVAMKVVKSAQHYTETALDEIKLL 81
Query: 465 KLVNKNDPADEHH--ILRLYDYF----YHLEHLFIVCELLRANLYEF 505
           K V ++DP+D +   +++L D F     +  H+ +V E+L  +L ++
Sbjct: 82  KCVRESDPSDPNKDMVVQLIDDFKISGMNGIHVCMVFEVLGHHLLKW 128

>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2) Length = 368

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 55/96 (57%), Gaps = 1/96 (1%)
Query: 415 RYYVTEYLGSAAFSKVFQAQD-LHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPA 473
           RY +   LG   F +V Q  D    G  V LKIIKN + + + +  EI +L+ +N+ DP 
Sbjct: 34  RYEIVSTLGEGTFGRVVQCVDHRRGGARVALKIIKNVEKYKEAARLEINVLEKINEKDPD 93
Query: 474 DEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFN 509
           +++  ++++D+F +  H+ I  ELL  + ++F K N
Sbjct: 94  NKNLCVQMFDWFDYHGHMCISFELLGLSTFDFLKDN 129

>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide Length = 397

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 57/98 (58%), Gaps = 6/98 (6%)
Query: 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPA 473
           GRY+V   LG   FS V+ + D+     V +K++K+ + + + +LDEI+LLK V  +DP 
Sbjct: 37  GRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPN 96
Query: 474 DEHH--ILRLYDYF----YHLEHLFIVCELLRANLYEF 505
           D +   +++L D F     +  H+ +V E+L  +L ++
Sbjct: 97  DPNREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKW 134

>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its Substrate AsfSF2 Length = 381

Iteration: 1
 Score = 53.1 bits (126), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 57/98 (58%), Gaps = 6/98 (6%)
Query: 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPA 473
           GRY+V   LG   FS V+ + D+     V +K++K+ + + + +LDEI+LLK V  +DP 
Sbjct: 21  GRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPN 80
Query: 474 DEHH--ILRLYDYF----YHLEHLFIVCELLRANLYEF 505
           D +   +++L D F     +  H+ +V E+L  +L ++
Sbjct: 81  DPNREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKW 118

>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki Length = 381

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Query: 415 RYYVTEYLGSAAFSKVFQAQDLHTG-VDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPA 473
           RY +   LG   F KV +  D   G   V LKII+N   + + +  EI +LK + + D  
Sbjct: 52  RYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKE 111
Query: 474 DEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFN 509
           ++   + + D+F    H+ I  ELL  N +EF K N
Sbjct: 112 NKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKEN 147

>pdb|2EU9|A Chain A, Crystal Structure Of Clk3 Length = 355

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Query: 415 RYYVTEYLGSAAFSKVFQAQDLHTG-VDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPA 473
           RY +   LG   F KV +  D   G   V LKII+N   + + +  EI +LK + + D  
Sbjct: 20  RYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKE 79
Query: 474 DEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFN 509
           ++   + + D+F    H+ I  ELL  N +EF K N
Sbjct: 80  NKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKEN 115

>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3 Length = 357

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Query: 415 RYYVTEYLGSAAFSKVFQAQDLHTG-VDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPA 473
           RY +   LG   F KV +  D   G   V LKII+N   + + +  EI +LK + + D  
Sbjct: 29  RYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKE 88
Query: 474 DEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFN 509
           ++   + + D+F    H+ I  ELL  N +EF K N
Sbjct: 89  NKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKEN 124

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	552
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	1e-46
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	5e-45
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	1e-40
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	2e-40
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	3e-40
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	4e-35
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	9e-19
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	3e-11
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	7e-11
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	8e-11
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	1e-10
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	2e-10
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	5e-10
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	5e-10
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	7e-10
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	2e-09
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	3e-09
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	3e-09
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	5e-09
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	1e-08
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	1e-08
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	2e-08
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	2e-08
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	3e-08
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	3e-08
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	3e-08
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	3e-08
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	3e-08
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	3e-08
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	4e-08
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	5e-08
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	6e-08
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	7e-08
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	7e-08
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	8e-08
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	9e-08
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	1e-07
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	1e-07
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	1e-07
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	1e-07
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	2e-07
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	2e-07
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	4e-07
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	5e-07
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	6e-07
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	6e-07
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	6e-07
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	7e-07
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	7e-07
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	7e-07
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	8e-07
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	8e-07
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	9e-07
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	1e-06
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	1e-06
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	1e-06
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	1e-06
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	1e-06
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	1e-06
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	2e-06
2a19_B	284	Interferon-induced, double-stranded RNA-activated	2e-06
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	2e-06
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	2e-06
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	2e-06
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	3e-06
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	4e-06
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	4e-06
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	4e-06
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	4e-06
3uqc_A	286	Probable conserved transmembrane protein; structur	5e-06
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	5e-06
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	7e-06
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	8e-06
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	8e-06
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	8e-06
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	1e-05
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	1e-05
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	1e-05
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	1e-05
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	2e-05
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	2e-05
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	2e-05
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	2e-05
3rp9_A	458	Mitogen-activated protein kinase; structural genom	2e-05
3o0g_A	292	Cell division protein kinase 5; kinase activator c	3e-05
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	3e-05
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	3e-05
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	3e-05
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	4e-05
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	4e-05
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	4e-05
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	4e-05
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	5e-05
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	6e-05
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	6e-05
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	7e-05
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	7e-05
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	8e-05
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	8e-05
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	8e-05
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	1e-04
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	1e-04
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	1e-04
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	1e-04
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	1e-04
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	1e-04
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	1e-04
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	2e-04
3bhy_A	283	Death-associated protein kinase 3; death associate	2e-04
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	2e-04
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	2e-04
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	2e-04
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	2e-04
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	2e-04
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	2e-04
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	3e-04
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	3e-04
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	3e-04
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	3e-04
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	3e-04
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	4e-04
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	4e-04
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	5e-04
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	6e-04
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	8e-04
3niz_A	311	Rhodanese family protein; structural genomics, str	9e-04

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* Length = 382

 Score =  166 bits (423), Expect = 1e-46
 Identities = 44/158 (27%), Positives = 77/158 (48%), Gaps = 9/158 (5%)

Query: 385 FHLRIIHRKNRTGF-----EENKDLPIILNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTG 439
           F     H+K R  +     ++N D  +        RY +   +G  +F +V +A D    
Sbjct: 20  FQSMSSHKKERKVYNDGYDDDNYDYIVKNGEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQ 79

Query: 440 VDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCELLR 499
             V +KIIKN K F +Q+  E++LL+L+NK+D   +++I+ L  +F    HL +V E+L 
Sbjct: 80  EWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEMLS 139

Query: 500 ANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLI 537
            NLY+  +     G     +L   +  +  + T L+ +
Sbjct: 140 YNLYDLLRNTNFRG----VSLNLTRKFAQQMCTALLFL 173

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* Length = 429

 Score =  163 bits (415), Expect = 5e-45
 Identities = 40/152 (26%), Positives = 77/152 (50%), Gaps = 5/152 (3%)

Query: 393 KNRTGF-EENKDLPIILNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK 451
            N  G+ ++      + +  +A RY V + +G  +F +V +A D      V LK+++N+K
Sbjct: 75  PNNGGYDDDQGSYVQVPHDHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEK 134

Query: 452 DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQE 511
            F  Q+ +EI++L+ + K D  +  +++ + + F    H+ +  ELL  NLYE  K N+ 
Sbjct: 135 RFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKF 194

Query: 512 SGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVI 543
            G    F+L  ++  +  +L  L  +    +I
Sbjct: 195 QG----FSLPLVRKFAHSILQCLDALHKNRII 222

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* Length = 339

 Score =  149 bits (378), Expect = 1e-40
 Identities = 35/114 (30%), Positives = 58/114 (50%), Gaps = 1/114 (0%)

Query: 401 NKDLPIILNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTG-VDVCLKIIKNDKDFFDQSLD 459
           +  L      V++ RY + + LG  AF KV +  D   G   V +KI+KN   + + +  
Sbjct: 1   SMHLICQSGDVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARS 60

Query: 460 EIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESG 513
           EI++L+ +N  DP      +++ ++F H  H+ IV ELL  + Y+F K N    
Sbjct: 61  EIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLP 114

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* Length = 355

 Score =  149 bits (377), Expect = 2e-40
 Identities = 33/115 (28%), Positives = 52/115 (45%), Gaps = 1/115 (0%)

Query: 400 ENKDLPIILNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTG-VDVCLKIIKNDKDFFDQSL 458
           +   L   +   +  RY +   LG   F KV +  D   G   V LKII+N   + + + 
Sbjct: 5   KEGHLVCRIGDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAAR 64

Query: 459 DEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESG 513
            EI +LK + + D  ++   + + D+F    H+ I  ELL  N +EF K N    
Sbjct: 65  LEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQP 119

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} Length = 360

 Score =  148 bits (376), Expect = 3e-40
 Identities = 26/133 (19%), Positives = 55/133 (41%), Gaps = 6/133 (4%)

Query: 386 HLRIIHRKNRTGF-----EENKDLPIILNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGV 440
           H    H   R        +E          ++   + V   +G   F +V   Q +    
Sbjct: 2   HHHHHHSSGRENLYFQGDDEIVHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKK 61

Query: 441 DVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCELLRA 500
              +K+++N K +   +  E  +LK +  +D  + ++I++ +  F + +H+ ++ E L  
Sbjct: 62  YYAVKVVRNIKKYTRSAKIEADILKKIQNDDI-NNNNIVKYHGKFMYYDHMCLIFEPLGP 120

Query: 501 NLYEFQKFNQESG 513
           +LYE    N  +G
Sbjct: 121 SLYEIITRNNYNG 133

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A Length = 373

 Score =  134 bits (340), Expect = 4e-35
 Identities = 44/132 (33%), Positives = 64/132 (48%), Gaps = 13/132 (9%)

Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKND 471
              RY +   LG   FS V+ A+D+     V +KI++ DK + + + DEIKLL+ VN  D
Sbjct: 17  KDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDAD 76

Query: 472 PADE-----HHILRLYDYFYH----LEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGR 522
              E     +HIL+L D+F H      H+ +V E+L  NL    K  +  G      L  
Sbjct: 77  NTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRG----IPLIY 132

Query: 523 LQVCSTFLLTLL 534
           ++  S  LL  L
Sbjct: 133 VKQISKQLLLGL 144

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* Length = 397

 Score = 87.7 bits (217), Expect = 9e-19
 Identities = 32/112 (28%), Positives = 59/112 (52%), Gaps = 6/112 (5%)

Query: 404 LPIILNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKL 463
             + +  +  GRY+V   LG   FS V+ + D+     V +K++K+ + + + +LDEI+L
Sbjct: 27  HLVKIGDLFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRL 86

Query: 464 LKLVNKNDPADE--HHILRLYDYFYHL----EHLFIVCELLRANLYEFQKFN 509
           LK V  +DP D     +++L D F        H+ +V E+L  +L ++   +
Sbjct: 87  LKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKS 138

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score = 63.9 bits (156), Expect = 3e-11
 Identities = 21/89 (23%), Positives = 35/89 (39%), Gaps = 13/89 (14%)

Query: 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKII-KNDKDFFDQSLDEIKLLKLVNKNDPA 473
            Y   + LG   FS V   + LH G    LK I  +++   +++  E  + +L N     
Sbjct: 30  HYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFN----- 84

Query: 474 DEH-HILRLYDYFYHLE----HLFIVCEL 497
             H +ILRL  Y           +++   
Sbjct: 85  --HPNILRLVAYCLRERGAKHEAWLLLPF 111

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score = 62.2 bits (152), Expect = 7e-11
 Identities = 20/98 (20%), Positives = 40/98 (40%), Gaps = 12/98 (12%)

Query: 405 PIILNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDE 460
            ++++     RY    +LG   F+K F+  D  T      KI+           ++   E
Sbjct: 6   EVLVDPRSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSME 65

Query: 461 IKLLKLVNKNDPADEH-HILRLYDYFYHLEHLFIVCEL 497
           I + + +        H H++  + +F   + +F+V EL
Sbjct: 66  ISIHRSLA-------HQHVVGFHGFFEDNDFVFVVLEL 96

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score = 62.3 bits (152), Expect = 8e-11
 Identities = 28/127 (22%), Positives = 56/127 (44%), Gaps = 13/127 (10%)

Query: 391 HRKNRTGFE-ENKDLPIILNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKII-- 447
           H  + +G +   ++L     +V    Y + + +GS   SKVFQ  +    +   +K +  
Sbjct: 4   HHHHSSGVDLGTENLYFQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQI-YAIKYVNL 62

Query: 448 -KNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCEL----LRANL 502
            + D    D   +EI  L  + ++       I+RLYDY    +++++V E     L + L
Sbjct: 63  EEADNQTLDSYRNEIAYLNKLQQHSD----KIIRLYDYEITDQYIYMVMECGNIDLNSWL 118

Query: 503 YEFQKFN 509
            + +  +
Sbjct: 119 KKKKSID 125

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score = 61.9 bits (151), Expect = 1e-10
 Identities = 20/98 (20%), Positives = 40/98 (40%), Gaps = 12/98 (12%)

Query: 405 PIILNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDE 460
            ++++     RY    +LG   F+K F+  D  T      KI+           ++   E
Sbjct: 32  EVLVDPRSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSME 91

Query: 461 IKLLKLVNKNDPADEH-HILRLYDYFYHLEHLFIVCEL 497
           I + + +        H H++  + +F   + +F+V EL
Sbjct: 92  ISIHRSLA-------HQHVVGFHGFFEDNDFVFVVLEL 122

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320

 Score = 61.6 bits (150), Expect = 2e-10
 Identities = 21/95 (22%), Positives = 38/95 (40%), Gaps = 11/95 (11%)

Query: 409 NTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLD-------EI 461
              +  +Y V   LGS  F  V+    +   + V +K ++ D+      L        E+
Sbjct: 38  KEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV 97

Query: 462 KLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCE 496
            LLK V+         ++RL D+F   +   ++ E
Sbjct: 98  VLLKKVSSGFS----GVIRLLDWFERPDSFVLILE 128

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score = 60.1 bits (146), Expect = 5e-10
 Identities = 25/107 (23%), Positives = 48/107 (44%), Gaps = 12/107 (11%)

Query: 410 TVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKII---KNDKDFFDQSLDEIKLLKL 466
           +V    Y + + +GS   SKVFQ  +    +   +K +   + D    D   +EI  L  
Sbjct: 5   SVKGRIYSILKQIGSGGSSKVFQVLNEKKQI-YAIKYVNLEEADNQTLDSYRNEIAYLNK 63

Query: 467 VNKNDPADEHHILRLYDYFYHLEHLFIVCEL----LRANLYEFQKFN 509
           + ++       I+RLYDY    +++++V E     L + L + +  +
Sbjct: 64  LQQHSD----KIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSID 106

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score = 60.6 bits (147), Expect = 5e-10
 Identities = 24/109 (22%), Positives = 47/109 (43%), Gaps = 16/109 (14%)

Query: 410 TVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQS-----LDEIKLL 464
           +V    Y + + +GS   SKVFQ  +        +K +  + +  D        +EI  L
Sbjct: 52  SVKGRIYSILKQIGSGGSSKVFQVLN-EKKQIYAIKYV--NLEEADNQTLDSYRNEIAYL 108

Query: 465 KLVNKNDPADEHHILRLYDYFYHLEHLFIVCEL----LRANLYEFQKFN 509
             + ++       I+RLYDY    +++++V E     L + L + +  +
Sbjct: 109 NKLQQHSD----KIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSID 153

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312

 Score = 59.6 bits (145), Expect = 7e-10
 Identities = 23/97 (23%), Positives = 34/97 (35%), Gaps = 11/97 (11%)

Query: 409 NTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLD-------EI 461
                  Y +   LG   F  VF    L   + V +K+I  ++      L        E+
Sbjct: 26  REAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEV 85

Query: 462 KLLKLVNKNDPADEH-HILRLYDYFYHLEHLFIVCEL 497
            LL  V        H  ++RL D+F   E   +V E 
Sbjct: 86  ALLWKVGA---GGGHPGVIRLLDWFETQEGFMLVLER 119

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score = 57.5 bits (140), Expect = 2e-09
 Identities = 23/89 (25%), Positives = 45/89 (50%), Gaps = 12/89 (13%)

Query: 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNK 469
             + V   LG  +F+ V++A+ +HTG++V +K+I            +  +E+K+   +  
Sbjct: 11  EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLK- 69

Query: 470 NDPADEH-HILRLYDYFYHLEHLFIVCEL 497
                 H  IL LY+YF    ++++V E+
Sbjct: 70  ------HPSILELYNYFEDSNYVYLVLEM 92

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score = 57.8 bits (140), Expect = 3e-09
 Identities = 20/100 (20%), Positives = 43/100 (43%), Gaps = 14/100 (14%)

Query: 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKII-KNDKDFFDQSLDEIKLLKLVNKNDPA 473
           R  V   L    F+ V++AQD+ +G +  LK +  N+++     + E+  +K ++ +   
Sbjct: 29  RLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHP-- 86

Query: 474 DEHHILRLYDYFYHLEH--------LFIVCELLRANLYEF 505
              +I++        +           ++ EL +  L EF
Sbjct: 87  ---NIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEF 123

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420

 Score = 57.8 bits (140), Expect = 3e-09
 Identities = 23/106 (21%), Positives = 49/106 (46%), Gaps = 17/106 (16%)

Query: 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPAD 474
            Y  T+ +G+ +F  V+QA+   +G  V +K +  DK F      E+++++ ++      
Sbjct: 55  SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF---KNRELQIMRKLD------ 105

Query: 475 EH-HILRLYDYFYHLE------HLFIVCELLRANLYEFQKFNQESG 513
            H +I+RL  +FY         +L +V + +   +Y   +    + 
Sbjct: 106 -HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK 150

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score = 56.5 bits (137), Expect = 5e-09
 Identities = 18/89 (20%), Positives = 38/89 (42%), Gaps = 12/89 (13%)

Query: 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNK 469
             + +   LG   F  V+ A++  +   + LK++   +        Q   E+++   +  
Sbjct: 9   EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR- 67

Query: 470 NDPADEH-HILRLYDYFYHLEHLFIVCEL 497
                 H +ILRLY YF+    ++++ E 
Sbjct: 68  ------HPNILRLYGYFHDATRVYLILEY 90

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score = 55.7 bits (135), Expect = 1e-08
 Identities = 24/118 (20%), Positives = 45/118 (38%), Gaps = 28/118 (23%)

Query: 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNK 469
             + +   LG   F  V+ A++      + LK++   +        Q   EI++   +  
Sbjct: 14  DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLR- 72

Query: 470 NDPADEH-HILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTL---GRL 523
                 H +ILR+Y+YF+  + ++++ E                 GE Y  L   GR 
Sbjct: 73  ------HPNILRMYNYFHDRKRIYLMLEFA-------------PRGELYKELQKHGRF 111

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score = 56.3 bits (136), Expect = 1e-08
 Identities = 26/95 (27%), Positives = 38/95 (40%), Gaps = 10/95 (10%)

Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKND 471
           +       + LG  +   V   Q    G  V +K +    DF D +L EIKLL       
Sbjct: 13  LKNLVVSEKILGYGSSGTVV-FQGSFQGRPVAVKRM--LIDFCDIALMEIKLLTES---- 65

Query: 472 PADEH-HILRLYDYFYHLEHLFIVCELLRANLYEF 505
             D+H +++R Y        L+I  EL   NL + 
Sbjct: 66  --DDHPNVIRYYCSETTDRFLYIALELCNLNLQDL 98

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score = 55.1 bits (133), Expect = 2e-08
 Identities = 19/95 (20%), Positives = 41/95 (43%), Gaps = 16/95 (16%)

Query: 410 TVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLD----EIKLLK 465
           +     + +++ LG  A + VF+ +   TG    +K+   +   F + +D    E ++LK
Sbjct: 5   STSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVF--NNISFLRPVDVQMREFEVLK 62

Query: 466 LVNKNDPADEH-HILRLYDYF--YHLEHLFIVCEL 497
            +N       H +I++L+         H  ++ E 
Sbjct: 63  KLN-------HKNIVKLFAIEEETTTRHKVLIMEF 90

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361

 Score = 55.4 bits (134), Expect = 2e-08
 Identities = 19/84 (22%), Positives = 31/84 (36%), Gaps = 8/84 (9%)

Query: 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPA 473
            RY   + +GS  F      +D  T   V +K I+      +    EI   + +      
Sbjct: 20  DRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLR----- 74

Query: 474 DEH-HILRLYDYFYHLEHLFIVCE 496
             H +I+R  +      HL I+ E
Sbjct: 75  --HPNIVRFKEVILTPTHLAIIME 96

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305

 Score = 54.6 bits (132), Expect = 3e-08
 Identities = 24/99 (24%), Positives = 46/99 (46%), Gaps = 15/99 (15%)

Query: 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLD-----EIKLLKLVN 468
           G+Y + + LG  ++ KV +  D  T     +KI+K  K     + +     EI+LL+ + 
Sbjct: 5   GKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLR 64

Query: 469 KNDPADEH-HILRLYDYFYHLE--HLFIVCELLRANLYE 504
                  H ++++L D  Y+ E   +++V E     + E
Sbjct: 65  -------HKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQE 96

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score = 54.5 bits (132), Expect = 3e-08
 Identities = 31/88 (35%), Positives = 43/88 (48%), Gaps = 9/88 (10%)

Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSL-DEIKLLKLVNKN 470
           I   +   E LGS AFS+VF  +   TG    LK IK    F D SL +EI +LK +   
Sbjct: 7   IRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIK-- 64

Query: 471 DPADEH-HILRLYDYFYHLEHLFIVCEL 497
                H +I+ L D +    H ++V +L
Sbjct: 65  -----HENIVTLEDIYESTTHYYLVMQL 87

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335

 Score = 54.7 bits (132), Expect = 3e-08
 Identities = 25/94 (26%), Positives = 39/94 (41%), Gaps = 17/94 (18%)

Query: 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLD---------EIKLL 464
            +Y     LGS AF  V+ A D     +V +K IK +K   D  ++         EI +L
Sbjct: 24  QKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAIL 83

Query: 465 KLVNKNDPADEH-HILRLYDYFYHLEHLFIVCEL 497
             V        H +I+++ D F +     +V E 
Sbjct: 84  SRVE-------HANIIKVLDIFENQGFFQLVMEK 110

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score = 54.6 bits (132), Expect = 3e-08
 Identities = 23/90 (25%), Positives = 48/90 (53%), Gaps = 15/90 (16%)

Query: 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLD-----EIKLLKLVN 468
           G Y + + +G   F+KV  A+ + TG +V +KII  DK   + +       E++++K++N
Sbjct: 15  GNYRLLKTIGKGNFAKVKLARHILTGREVAIKII--DKTQLNPTSLQKLFREVRIMKILN 72

Query: 469 KNDPADEH-HILRLYDYFYHLEHLFIVCEL 497
                  H +I++L++     + L+++ E 
Sbjct: 73  -------HPNIVKLFEVIETEKTLYLIMEY 95

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score = 54.8 bits (132), Expect = 3e-08
 Identities = 30/122 (24%), Positives = 49/122 (40%), Gaps = 14/122 (11%)

Query: 400 ENKDLPIILNTVIAG--RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQS 457
           E  D     + VI G   +   + LG  A   +   + +    DV +K I    + F  +
Sbjct: 8   EQDDGDEETSVVIVGKISFCPKDVLGHGAEGTIV-YRGMFDNRDVAVKRI--LPECFSFA 64

Query: 458 LDEIKLLKLVNKNDPADEH-HILRLYDYFYHLEHLFIVCELLRANLYEF--QKFNQESGG 514
             E++LL+        DEH +++R +      +  +I  EL  A L E+  QK     G 
Sbjct: 65  DREVQLLRES------DEHPNVIRYFCTEKDRQFQYIAIELCAATLQEYVEQKDFAHLGL 118

Query: 515 EA 516
           E 
Sbjct: 119 EP 120

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394

 Score = 54.3 bits (131), Expect = 4e-08
 Identities = 22/98 (22%), Positives = 45/98 (45%), Gaps = 18/98 (18%)

Query: 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPAD 474
            Y   + +G+ +F  VFQA+ + +  +V +K +  DK F      E++++++V       
Sbjct: 41  AYTNCKVIGNGSFGVVFQAKLVESD-EVAIKKVLQDKRF---KNRELQIMRIVK------ 90

Query: 475 EH-HILRLYDYFYHLEH------LFIVCELLRANLYEF 505
            H +++ L  +FY          L +V E +   +Y  
Sbjct: 91  -HPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRA 127

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score = 54.7 bits (131), Expect = 5e-08
 Identities = 19/97 (19%), Positives = 38/97 (39%), Gaps = 16/97 (16%)

Query: 410 TVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQS--LDEIKLLKLV 467
           T   G + + E LG+  F  V +     TG  V +K  + +    ++     EI+++K +
Sbjct: 10  TQTCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKL 69

Query: 468 NKNDPADEH-HILRLYDYFYHLEHL------FIVCEL 497
           N       H +++   +    L+ L       +  E 
Sbjct: 70  N-------HPNVVSAREVPDGLQKLAPNDLPLLAMEY 99

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276

 Score = 53.0 bits (128), Expect = 6e-08
 Identities = 27/88 (30%), Positives = 37/88 (42%), Gaps = 12/88 (13%)

Query: 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNK 469
           G Y + + LG   F KV   +   TG  V +KI+   K    D   +   EI+ LKL   
Sbjct: 11  GHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFR- 69

Query: 470 NDPADEH-HILRLYDYFYHLEHLFIVCE 496
                 H HI++LY         F+V E
Sbjct: 70  ------HPHIIKLYQVISTPTDFFMVME 91

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score = 53.7 bits (129), Expect = 7e-08
 Identities = 19/93 (20%), Positives = 39/93 (41%), Gaps = 12/93 (12%)

Query: 410 TVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK--DFFDQSLDEIKLLKLV 467
           +     + +++ LG  A + VF+ +   TG    +K+  N       D  + E ++LK +
Sbjct: 5   STSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKL 64

Query: 468 NKNDPADEH-HILRLYDYFYHL--EHLFIVCEL 497
           N       H +I++L+         H  ++ E 
Sbjct: 65  N-------HKNIVKLFAIEEETTTRHKVLIMEF 90

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276

 Score = 53.0 bits (128), Expect = 7e-08
 Identities = 17/86 (19%), Positives = 37/86 (43%), Gaps = 10/86 (11%)

Query: 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKND 471
             + + + LG  A+ +V  A +  T   V +KI+   +  D  +    EI + K++N   
Sbjct: 7   EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLN--- 63

Query: 472 PADEH-HILRLYDYFYHLEHLFIVCE 496
               H ++++ Y +       ++  E
Sbjct: 64  ----HENVVKFYGHRREGNIQYLFLE 85

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476

 Score = 53.6 bits (129), Expect = 8e-08
 Identities = 27/88 (30%), Positives = 38/88 (43%), Gaps = 12/88 (13%)

Query: 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNK 469
           G Y + + LG   F KV   +   TG  V +KI+   K    D   +   EI+ LKL   
Sbjct: 16  GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFR- 74

Query: 470 NDPADEH-HILRLYDYFYHLEHLFIVCE 496
                 H HI++LY        +F+V E
Sbjct: 75  ------HPHIIKLYQVISTPSDIFMVME 96

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336

 Score = 53.1 bits (128), Expect = 9e-08
 Identities = 28/90 (31%), Positives = 37/90 (41%), Gaps = 16/90 (17%)

Query: 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLD------EIKLLKLV 467
           G Y + E LG  +F KV  A    T   V LK I   +    +S        EI  LKL+
Sbjct: 9   GPYIIRETLGEGSFGKVKLATHYKTQQKVALKFI--SRQLLKKSDMHMRVEREISYLKLL 66

Query: 468 NKNDPADEH-HILRLYDYFYHLEHLFIVCE 496
                   H HI++LYD       + +V E
Sbjct: 67  R-------HPHIIKLYDVITTPTDIVMVIE 89

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* Length = 330

 Score = 53.2 bits (128), Expect = 1e-07
 Identities = 17/100 (17%), Positives = 39/100 (39%), Gaps = 6/100 (6%)

Query: 409 NTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVN 468
             ++   + V + +G   F ++   ++L+T   V +K+         Q   E +  K + 
Sbjct: 4   VLMVGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR-APQLHLEYRFYKQLG 62

Query: 469 KNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKF 508
                    I ++Y +    ++  +V ELL  +L +    
Sbjct: 63  SG-----DGIPQVYYFGPCGKYNAMVLELLGPSLEDLFDL 97

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score = 52.8 bits (127), Expect = 1e-07
 Identities = 17/87 (19%), Positives = 36/87 (41%), Gaps = 13/87 (14%)

Query: 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIK----NDKDFFDQSLDEIKLLKLVNKN 470
           +Y   + +G  +F K    +    G    +K I     + K+  ++S  E+ +L  +   
Sbjct: 25  KYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKE-REESRREVAVLANMK-- 81

Query: 471 DPADEH-HILRLYDYFYHLEHLFIVCE 496
                H +I++  + F     L+IV +
Sbjct: 82  -----HPNIVQYRESFEENGSLYIVMD 103

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score = 52.3 bits (126), Expect = 1e-07
 Identities = 21/103 (20%), Positives = 39/103 (37%), Gaps = 21/103 (20%)

Query: 409 NTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVN 468
           +   A  +     LG  AF +V +A++        +K I++ ++     L E+ LL  +N
Sbjct: 1   SLRYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLN 60

Query: 469 KNDPADEH-HILRLYDYFYHLEH-------------LFIVCEL 497
                  H +++R Y  +    +             LFI  E 
Sbjct: 61  -------HQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEY 96

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323

 Score = 52.3 bits (126), Expect = 1e-07
 Identities = 17/86 (19%), Positives = 37/86 (43%), Gaps = 10/86 (11%)

Query: 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKND 471
             + + + LG  A+ +V  A +  T   V +KI+   +  D  +    EI + K++N   
Sbjct: 7   EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLN--- 63

Query: 472 PADEH-HILRLYDYFYHLEHLFIVCE 496
               H ++++ Y +       ++  E
Sbjct: 64  ----HENVVKFYGHRREGNIQYLFLE 85

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* Length = 298

 Score = 52.4 bits (126), Expect = 2e-07
 Identities = 23/101 (22%), Positives = 38/101 (37%), Gaps = 6/101 (5%)

Query: 409 NTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVN 468
           N V+   Y V   +G  +F  +F+  +L     V +K      D   Q  DE +  KL+ 
Sbjct: 5   NNVVGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD-APQLRDEYRTYKLLA 63

Query: 469 KNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFN 509
                    I  +Y +     H  +V +LL  +L +     
Sbjct: 64  GC-----TGIPNVYYFGQEGLHNVLVIDLLGPSLEDLLDLC 99

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360

 Score = 52.7 bits (127), Expect = 2e-07
 Identities = 25/108 (23%), Positives = 43/108 (39%), Gaps = 17/108 (15%)

Query: 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPAD 474
           R+ V    G   F  V   ++  TG+ V +K +  D  F ++ L  ++ L ++       
Sbjct: 24  RFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVL------- 76

Query: 475 EHH--ILRLYDYFYHLEH-------LFIVCELLRANLYEFQKFNQESG 513
            HH  I++L  YFY L         L +V E +   L+   +      
Sbjct: 77  -HHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQ 123

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score = 51.1 bits (123), Expect = 4e-07
 Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 9/85 (10%)

Query: 416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADE 475
               + LG  +FS   +     +     +KII   K     +  EI  LKL       + 
Sbjct: 13  DLKDKPLGEGSFSICRKCVHKKSNQAFAVKII--SKRMEANTQKEITALKLC------EG 64

Query: 476 H-HILRLYDYFYHLEHLFIVCELLR 499
           H +I++L++ F+   H F+V ELL 
Sbjct: 65  HPNIVKLHEVFHDQLHTFLVMELLN 89

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383

 Score = 50.9 bits (122), Expect = 5e-07
 Identities = 19/77 (24%), Positives = 39/77 (50%), Gaps = 11/77 (14%)

Query: 411 VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKN 470
             + +Y + + LG+ +F  V +  D+ +G    LK +  D  +      E+ ++K+++  
Sbjct: 4   TSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRY---KNRELDIMKVLD-- 58

Query: 471 DPADEH-HILRLYDYFY 486
                H +I++L DYFY
Sbjct: 59  -----HVNIIKLVDYFY 70

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score = 50.4 bits (121), Expect = 6e-07
 Identities = 26/96 (27%), Positives = 43/96 (44%), Gaps = 18/96 (18%)

Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIK---------NDKDFFDQSLDEIK 462
           +   Y +++ LGS A  +V  A +  T   V +KII           + D       EI+
Sbjct: 8   LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIE 67

Query: 463 LLKLVNKNDPADEH-HILRLYDYFYHLEHLFIVCEL 497
           +LK +N       H  I+++ + F+  E  +IV EL
Sbjct: 68  ILKKLN-------HPCIIKIKN-FFDAEDYYIVLEL 95

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score = 50.4 bits (121), Expect = 6e-07
 Identities = 20/89 (22%), Positives = 41/89 (46%), Gaps = 10/89 (11%)

Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKND 471
               Y V E +G  ++S   +     T ++  +KII   K       +EI++L    +  
Sbjct: 20  FTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSK---RDPTEEIEILLRYGQ-- 74

Query: 472 PADEH-HILRLYDYFYHLEHLFIVCELLR 499
               H +I+ L D +   +++++V EL++
Sbjct: 75  ----HPNIITLKDVYDDGKYVYVVTELMK 99

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311

 Score = 50.3 bits (121), Expect = 6e-07
 Identities = 20/95 (21%), Positives = 39/95 (41%), Gaps = 11/95 (11%)

Query: 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD---FFDQSLDEIKLLKLVNKND 471
           +Y     +G  ++  VF+ ++  TG  V +K     +D       +L EI++LK +    
Sbjct: 4   KYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLK--- 60

Query: 472 PADEH-HILRLYDYFYHLEHLFIVCELLRANLYEF 505
               H +++ L + F     L +V E     +   
Sbjct: 61  ----HPNLVNLLEVFRRKRRLHLVFEYCDHTVLHE 91

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score = 50.4 bits (121), Expect = 7e-07
 Identities = 25/88 (28%), Positives = 40/88 (45%), Gaps = 12/88 (13%)

Query: 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIK----NDKDFFDQSLDEIKLLKLVNK 469
             + + + +G   FS+V++A  L  GV V LK ++     D       + EI LLK +N 
Sbjct: 32  ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLN- 90

Query: 470 NDPADEH-HILRLYDYFYHLEHLFIVCE 496
                 H ++++ Y  F     L IV E
Sbjct: 91  ------HPNVIKYYASFIEDNELNIVLE 112

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} Length = 483

 Score = 50.8 bits (121), Expect = 7e-07
 Identities = 15/94 (15%), Positives = 41/94 (43%), Gaps = 6/94 (6%)

Query: 411 VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKN 470
            +  ++ +   +GS +F +++   ++ T  +V +K+         Q L E K+ +++   
Sbjct: 4   RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-HPQLLYESKIYRILQG- 61

Query: 471 DPADEHHILRLYDYFYHLEHLFIVCELLRANLYE 504
                  I  +  +    ++  +V +LL  +L +
Sbjct: 62  ----GTGIPNVRWFGVEGDYNVLVMDLLGPSLED 91

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score = 50.4 bits (121), Expect = 7e-07
 Identities = 20/116 (17%), Positives = 38/116 (32%), Gaps = 16/116 (13%)

Query: 390 IHRKNRTGFEENKDLPIILNTVIAGRYYVT-EYLGSAAFSKVFQAQDLHTGVDVCLKIIK 448
            H  + +G E     P      +   Y ++ + LG     KV +     TG    LK++ 
Sbjct: 4   HHHHHSSGLEVLFQGPEPKKYAVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLY 63

Query: 449 NDKDFFDQSLDEIKLLKLVNKNDPADEH-HILRLYDYF----YHLEHLFIVCELLR 499
           +          E+      +         HI+ + D +    +    L I+ E + 
Sbjct: 64  DSPKAR----QEVDHHWQASG------GPHIVCILDVYENMHHGKRCLLIIMECME 109

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score = 49.9 bits (120), Expect = 8e-07
 Identities = 24/105 (22%), Positives = 43/105 (40%), Gaps = 20/105 (19%)

Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK-DFFDQSLDEIKLLKLVNKN 470
           I   Y +   +G  ++ +V  A    T +    K I     +  D+   EI+++K +   
Sbjct: 7   INQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSL--- 63

Query: 471 DPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGE 515
              D  +I+RLY+ F     +++V EL              +GGE
Sbjct: 64  ---DHPNIIRLYETFEDNTDIYLVMELC-------------TGGE 92

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score = 50.0 bits (120), Expect = 8e-07
 Identities = 17/89 (19%), Positives = 35/89 (39%), Gaps = 15/89 (16%)

Query: 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIK----NDKDFFDQSLDEIKLLKLVNKN 470
            Y V   +G+ ++ +  + +    G  +  K +      + +     + E+ LL+ +   
Sbjct: 7   DYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAE-KQMLVSEVNLLRELK-- 63

Query: 471 DPADEH-HILRLYDYFYHLE--HLFIVCE 496
                H +I+R YD         L+IV E
Sbjct: 64  -----HPNIVRYYDRIIDRTNTTLYIVME 87

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score = 49.7 bits (119), Expect = 9e-07
 Identities = 27/133 (20%), Positives = 51/133 (38%), Gaps = 21/133 (15%)

Query: 391 HRKNRTGFEENKDLPIILNTVIAGRYY-VTEYLGSAAFSKVFQAQDLHTGVDVCLKII-- 447
             +N+   +  +     +     GR+      +G  +F  V++  D  T V+V    +  
Sbjct: 2   EERNQQQDDIEELETKAVGMSNDGRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQD 61

Query: 448 -KNDKDFFDQSLDEIKLLK-LVNKNDPADEHHILRLYDYFYHL----EHLFIVCEL---- 497
            K  K    +  +E ++LK L + N       I+R YD +       + + +V EL    
Sbjct: 62  RKLTKSERQRFKEEAEMLKGLQHPN-------IVRFYDSWESTVKGKKCIVLVTELMTSG 114

Query: 498 -LRANLYEFQKFN 509
            L+  L  F+   
Sbjct: 115 TLKTYLKRFKVMK 127

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score = 49.6 bits (119), Expect = 1e-06
 Identities = 21/97 (21%), Positives = 37/97 (38%), Gaps = 17/97 (17%)

Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIK----------NDKDFFDQSLDEI 461
               Y   E LG    S V +     T  +  +KII             ++  + +L E+
Sbjct: 15  FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEV 74

Query: 462 KLLKLVNKNDPADEH-HILRLYDYFYHLEHLFIVCEL 497
            +L+ V        H +I++L D +      F+V +L
Sbjct: 75  DILRKV------SGHPNIIQLKDTYETNTFFFLVFDL 105

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score = 50.0 bits (119), Expect = 1e-06
 Identities = 24/110 (21%), Positives = 41/110 (37%), Gaps = 14/110 (12%)

Query: 398 FEENKDLPIILN----TVIAGRYYVTEYLGSAAFSKVFQA-----QDLHTGVDVCLKIIK 448
           FE    LP I       + +   YV   LG  AF++V++A      D        LK+ K
Sbjct: 45  FEWQCKLPAIKPKTEFQLGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQK 104

Query: 449 NDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCELL 498
               +     +     +L+ +  P+ +H  ++ Y          +V EL 
Sbjct: 105 PANPW-----EFYIGTQLMERLKPSMQHMFMKFYSAHLFQNGSVLVGELY 149

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score = 49.2 bits (118), Expect = 1e-06
 Identities = 16/86 (18%), Positives = 33/86 (38%), Gaps = 8/86 (9%)

Query: 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIK---NDKDFFDQSLDEIKLLKLVNKND 471
            ++  E +GS  F  VF+      G    +K  K           +L E+    ++ ++ 
Sbjct: 12  EFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHS 71

Query: 472 PADEHHILRLYDYFYHLEHLFIVCEL 497
                H++R +  +   +H+ I  E 
Sbjct: 72  -----HVVRYFSAWAEDDHMLIQNEY 92

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A Length = 296

 Score = 49.3 bits (118), Expect = 1e-06
 Identities = 20/99 (20%), Positives = 39/99 (39%), Gaps = 6/99 (6%)

Query: 411 VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKN 470
            +  RY +   +GS +F  ++   D+  G +V +K+         Q   E K+ K++   
Sbjct: 6   RVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHP-QLHIESKIYKMMQGG 64

Query: 471 DPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFN 509
                  I  +       ++  +V ELL  +L +   F 
Sbjct: 65  -----VGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFC 98

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score = 49.6 bits (119), Expect = 1e-06
 Identities = 20/86 (23%), Positives = 36/86 (41%), Gaps = 7/86 (8%)

Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKND 471
           ++  + V   LG  A S V++ +   T     LK++K   D       EI +L  +    
Sbjct: 51  LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVD-KKIVRTEIGVLLRL---- 105

Query: 472 PADEHHILRLYDYFYHLEHLFIVCEL 497
                +I++L + F     + +V EL
Sbjct: 106 --SHPNIIKLKEIFETPTEISLVLEL 129

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score = 49.4 bits (118), Expect = 1e-06
 Identities = 22/114 (19%), Positives = 46/114 (40%), Gaps = 12/114 (10%)

Query: 391 HRKNRTGFEENKDLPIILNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND 450
           H  + +   EN          +  +Y++   +G  ++  V  A +  T     +KI+  +
Sbjct: 3   HHHHHSSGRENLYFQGGSLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKN 62

Query: 451 KDFFDQSLD------EIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCELL 498
           K       D      E++L+K +         +I RLY+ +   +++ +V EL 
Sbjct: 63  KIRQINPKDVERIKTEVRLMKKL------HHPNIARLYEVYEDEQYICLVMELC 110

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score = 49.2 bits (118), Expect = 2e-06
 Identities = 25/112 (22%), Positives = 43/112 (38%), Gaps = 19/112 (16%)

Query: 391 HRKNRTGFEENKDLPIILNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKII--- 447
           H   R                 A RY +   LG  +F +V + +D  T  +  +K+I   
Sbjct: 7   HSSGRENLYFQGT--------FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKA 58

Query: 448 KNDKDFFDQSLDEIKLLKLVNKNDPADEH-HILRLYDYFYHLEHLFIVCELL 498
                     L E++LLK ++       H +I++L++        +IV EL 
Sbjct: 59  SAKNKDTSTILREVELLKKLD-------HPNIMKLFEILEDSSSFYIVGELY 103

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score = 48.8 bits (117), Expect = 2e-06
 Identities = 15/85 (17%), Positives = 36/85 (42%), Gaps = 11/85 (12%)

Query: 407 ILNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKL 466
            ++      +   E +GS  F +VF+A+    G    +K +K +    +++  E+K L  
Sbjct: 4   TVDKRFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN---EKAEREVKALAK 60

Query: 467 VNKNDPADEH-HILRLYDYFYHLEH 490
           ++       H +I+     +   ++
Sbjct: 61  LD-------HVNIVHYNGCWDGFDY 78

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score = 48.7 bits (117), Expect = 2e-06
 Identities = 23/90 (25%), Positives = 37/90 (41%), Gaps = 11/90 (12%)

Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLD---EIKLLKLVN 468
            +  Y V E LG  AFS V +     TG++   KII   K           E ++ + + 
Sbjct: 4   FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQ 63

Query: 469 KNDPADEH-HILRLYDYFYHLEHLFIVCEL 497
                  H +I+RL+D        ++V +L
Sbjct: 64  -------HPNIVRLHDSIQEESFHYLVFDL 86

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score = 49.3 bits (118), Expect = 2e-06
 Identities = 23/97 (23%), Positives = 37/97 (38%), Gaps = 16/97 (16%)

Query: 409 NTVIAGRYYVT-EYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLV 467
              I   Y VT + LG     KV Q  +  T     LK++++          E++L    
Sbjct: 56  KNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKAR----REVELHWRA 111

Query: 468 NKNDPADEH-HILRLYDYF----YHLEHLFIVCELLR 499
           ++        HI+R+ D +       + L IV E L 
Sbjct: 112 SQ------CPHIVRIVDVYENLYAGRKCLLIVMECLD 142

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score = 49.3 bits (118), Expect = 2e-06
 Identities = 25/96 (26%), Positives = 44/96 (45%), Gaps = 18/96 (18%)

Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLD---------EIK 462
           +   Y +++ LGS A  +V  A +  T   V ++II   K     + +         EI+
Sbjct: 133 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIE 192

Query: 463 LLKLVNKNDPADEH-HILRLYDYFYHLEHLFIVCEL 497
           +LK +N       H  I+++ + F+  E  +IV EL
Sbjct: 193 ILKKLN-------HPCIIKIKN-FFDAEDYYIVLEL 220

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score = 48.6 bits (116), Expect = 3e-06
 Identities = 19/95 (20%), Positives = 37/95 (38%), Gaps = 14/95 (14%)

Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK---------DFFDQSLDEIK 462
              +Y   + +G    S V +     TG +  +KI++            +  + +  E  
Sbjct: 92  FYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETH 151

Query: 463 LLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCEL 497
           +L+ V     A   HI+ L D +     +F+V +L
Sbjct: 152 ILRQV-----AGHPHIITLIDSYESSSFMFLVFDL 181

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score = 47.6 bits (114), Expect = 4e-06
 Identities = 27/133 (20%), Positives = 48/133 (36%), Gaps = 31/133 (23%)

Query: 386 HLRIIHRKNRTGFEENKDLPIILNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLK 445
           H    H   R                I   +     LGS AF  V   ++  +G++  +K
Sbjct: 2   HHHHHHSSGRENLYFQGT--------IDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIK 53

Query: 446 IIKNDKDFFDQS--LDEIKLLKLVNKNDPADEH-HILRLYDYFYHLEHLFIVCELLRANL 502
            I  D+          EI++LK ++       H +I+++++ F    +++IV E      
Sbjct: 54  TINKDRSQVPMEQIEAEIEVLKSLD-------HPNIIKIFEVFEDYHNMYIVMETC---- 102

Query: 503 YEFQKFNQESGGE 515
                     GGE
Sbjct: 103 ---------EGGE 106

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score = 48.1 bits (115), Expect = 4e-06
 Identities = 19/96 (19%), Positives = 36/96 (37%), Gaps = 12/96 (12%)

Query: 409 NTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLD------EIK 462
           + +    Y + E +G   FS V +  +  TG    +KI+   K      L       E  
Sbjct: 19  DVLFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREAS 78

Query: 463 LLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCELL 498
           +  ++         HI+ L + +     L++V E +
Sbjct: 79  ICHML------KHPHIVELLETYSSDGMLYMVFEFM 108

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score = 48.5 bits (116), Expect = 4e-06
 Identities = 24/90 (26%), Positives = 44/90 (48%), Gaps = 10/90 (11%)

Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIK----NDKDFFDQSLDEIKLLKLV 467
            + RY     LG  +F +V   +D  TG +  +K+I       K   +  L E++LLK +
Sbjct: 24  FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQL 83

Query: 468 NKNDPADEHHILRLYDYFYHLEHLFIVCEL 497
                 D  +I++LY++F    + ++V E+
Sbjct: 84  ------DHPNIMKLYEFFEDKGYFYLVGEV 107

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331

 Score = 48.0 bits (115), Expect = 4e-06
 Identities = 18/95 (18%), Positives = 39/95 (41%), Gaps = 11/95 (11%)

Query: 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD---FFDQSLDEIKLLKLVNKND 471
           +Y     +G  ++  V + ++  TG  V +K      D       ++ EIKLLK +    
Sbjct: 26  KYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLR--- 82

Query: 472 PADEH-HILRLYDYFYHLEHLFIVCELLRANLYEF 505
               H +++ L +     +  ++V E +   + + 
Sbjct: 83  ----HENLVNLLEVCKKKKRWYLVFEFVDHTILDD 113

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286

 Score = 47.4 bits (113), Expect = 5e-06
 Identities = 18/94 (19%), Positives = 33/94 (35%), Gaps = 10/94 (10%)

Query: 410 TVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIK----NDKDFFDQSLDEIKLLK 465
            +  GRY +  + G     + +QA D      V L  +        D   ++L     L 
Sbjct: 27  RIANGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLS 86

Query: 466 LVNKNDPADEHHILRLYDYFYHLEHLFIVCELLR 499
            +  + P     + R+ D  +      +V E +R
Sbjct: 87  RI--DKP----GVARVLDVVHTRAGGLVVAEWIR 114

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score = 47.3 bits (113), Expect = 5e-06
 Identities = 16/87 (18%), Positives = 32/87 (36%), Gaps = 10/87 (11%)

Query: 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIK----NDKDFFDQSLDEIKLLKLVNKN 470
            +     LG  ++ +VF+ +    G    +K         KD   + L E+   + V ++
Sbjct: 58  SFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKD-RARKLAEVGSHEKVGQH 116

Query: 471 DPADEHHILRLYDYFYHLEHLFIVCEL 497
                   +RL   +     L++  EL
Sbjct: 117 P-----CCVRLEQAWEEGGILYLQTEL 138

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score = 47.4 bits (113), Expect = 7e-06
 Identities = 12/102 (11%), Positives = 32/102 (31%), Gaps = 28/102 (27%)

Query: 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIK------------------NDKDFFD 455
             Y +   L    F+K+   +         LK  +                  + K  +D
Sbjct: 31  NDYRIIRTLNQGKFNKIILCE--KDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYD 88

Query: 456 QSLDEIKLLKLVNKNDPADEH-HILRLYDYFYHLEHLFIVCE 496
              +E++++  +        + + L       + + ++I+ E
Sbjct: 89  DFKNELQIITDIK-------NEYCLTCEGIITNYDEVYIIYE 123

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score = 47.3 bits (113), Expect = 8e-06
 Identities = 21/90 (23%), Positives = 36/90 (40%), Gaps = 11/90 (12%)

Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLD---EIKLLKLVN 468
               Y + E LG  AFS V +   +  G +    II   K           E ++ +L+ 
Sbjct: 9   FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLK 68

Query: 469 KNDPADEH-HILRLYDYFYHLEHLFIVCEL 497
                  H +I+RL+D      H +++ +L
Sbjct: 69  -------HPNIVRLHDSISEEGHHYLIFDL 91

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score = 46.8 bits (112), Expect = 8e-06
 Identities = 21/105 (20%), Positives = 38/105 (36%), Gaps = 21/105 (20%)

Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKND 471
           +  +Y + E LG   F  V +  +  +      K +K           EI +L +     
Sbjct: 3   LYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIAR--- 59

Query: 472 PADEH-HILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGE 515
               H +IL L++ F  +E L ++ E +             SG +
Sbjct: 60  ----HRNILHLHESFESMEELVMIFEFI-------------SGLD 87

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score = 46.9 bits (112), Expect = 8e-06
 Identities = 24/90 (26%), Positives = 39/90 (43%), Gaps = 11/90 (12%)

Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKII---KNDKDFFDQSLDEIKLLKLVN 468
            +  Y V E LG  AFS V +     TG++   KII   K     F +   E ++ + + 
Sbjct: 27  FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQ 86

Query: 469 KNDPADEH-HILRLYDYFYHLEHLFIVCEL 497
                  H +I+RL+D        ++V +L
Sbjct: 87  -------HPNIVRLHDSIQEESFHYLVFDL 109

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299

 Score = 46.5 bits (111), Expect = 1e-05
 Identities = 23/97 (23%), Positives = 37/97 (38%), Gaps = 16/97 (16%)

Query: 409 NTVIAGRYYVT-EYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLV 467
              I   Y VT + LG     KV Q  +  T     LK++++          E++L    
Sbjct: 12  KNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKA----RREVELHWRA 67

Query: 468 NKNDPADEH-HILRLYDYF----YHLEHLFIVCELLR 499
           ++        HI+R+ D +       + L IV E L 
Sbjct: 68  SQ------CPHIVRIVDVYENLYAGRKCLLIVMECLD 98

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330

 Score = 46.5 bits (111), Expect = 1e-05
 Identities = 20/69 (28%), Positives = 35/69 (50%), Gaps = 7/69 (10%)

Query: 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPAD 474
            Y +   LG   +S+VF+A ++     V +KI+K  K    +   EIK+L+ + +  P  
Sbjct: 37  DYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKK--KKIKREIKILENL-RGGP-- 91

Query: 475 EHHILRLYD 483
             +I+ L D
Sbjct: 92  --NIITLAD 98

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score = 46.2 bits (110), Expect = 1e-05
 Identities = 18/98 (18%), Positives = 39/98 (39%), Gaps = 22/98 (22%)

Query: 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIK--NDKDFFDQSLDEIKLLKLVNKNDP 472
            +   + LG   F  VF+A++     +  +K I+  N +   ++ + E+K L  +     
Sbjct: 6   DFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLE---- 61

Query: 473 ADEH-HILRLYDYF------------YHLEHLFIVCEL 497
              H  I+R ++ +                +L+I  +L
Sbjct: 62  ---HPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQL 96

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score = 46.1 bits (110), Expect = 1e-05
 Identities = 19/82 (23%), Positives = 37/82 (45%), Gaps = 8/82 (9%)

Query: 420 EYLGSAAFSKVFQAQDLHTGVDVCLKII-KNDKDFFDQSLDEIKLLKLVNKNDPADEH-H 477
           + LG  A ++V    +L T  +  +KII K       +   E+++L           H +
Sbjct: 19  DVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQ------GHRN 72

Query: 478 ILRLYDYFYHLEHLFIVCELLR 499
           +L L ++F   +  ++V E +R
Sbjct: 73  VLELIEFFEEEDRFYLVFEKMR 94

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score = 46.6 bits (111), Expect = 2e-05
 Identities = 26/112 (23%), Positives = 47/112 (41%), Gaps = 15/112 (13%)

Query: 391 HRKNRTGFEENKDLPIILNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKII--- 447
           H  + +   EN    +      A RY +   LG  +F +V + +D  T  +  +K+I   
Sbjct: 3   HHHHHSSGREN----LYFQGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKA 58

Query: 448 KNDKDFFDQSLDEIKLLKLVNKNDPADEH-HILRLYDYFYHLEHLFIVCELL 498
                     L E++LLK ++       H +I++L++        +IV EL 
Sbjct: 59  SAKNKDTSTILREVELLKKLD-------HPNIMKLFEILEDSSSFYIVGELY 103

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... Length = 367

 Score = 45.8 bits (109), Expect = 2e-05
 Identities = 25/105 (23%), Positives = 43/105 (40%), Gaps = 23/105 (21%)

Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLD------EIKLLK 465
           +  RY     +GS A+  V  A D  TG+ V +K +      F   +       E++LLK
Sbjct: 27  VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR---PFQSIIHAKRTYRELRLLK 83

Query: 466 LVN-KNDPADEHHILRLYDYFY------HLEHLFIVCELLRANLY 503
            +  +N       ++ L D F           +++V  L+ A+L 
Sbjct: 84  HMKHEN-------VIGLLDVFTPARSLEEFNDVYLVTHLMGADLN 121

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324

 Score = 45.7 bits (109), Expect = 2e-05
 Identities = 21/87 (24%), Positives = 40/87 (45%), Gaps = 10/87 (11%)

Query: 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD--FFDQSLDEIKLLKLVNKNDP 472
            Y   + LG   ++ V++ +   T   V LK I+ + +      ++ E+ LLK +     
Sbjct: 3   TYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLK---- 58

Query: 473 ADEH-HILRLYDYFYHLEHLFIVCELL 498
              H +I+ L+D  +  + L +V E L
Sbjct: 59  ---HANIVTLHDIIHTEKSLTLVFEYL 82

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score = 45.8 bits (109), Expect = 2e-05
 Identities = 25/90 (27%), Positives = 46/90 (51%), Gaps = 11/90 (12%)

Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKII---KNDKDFFDQSLDEIKLLKLVN 468
           ++  Y   + LGS A+ +V   +D  T V+  +KII           + L+E+ +LKL++
Sbjct: 35  LSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLD 94

Query: 469 KNDPADEH-HILRLYDYFYHLEHLFIVCEL 497
                  H +I++LYD+F    + ++V E 
Sbjct: 95  -------HPNIMKLYDFFEDKRNYYLVMEC 117

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458

 Score = 46.0 bits (109), Expect = 2e-05
 Identities = 22/112 (19%), Positives = 45/112 (40%), Gaps = 22/112 (19%)

Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLD------EIKLLK 465
           I  RY +   +G+ ++  V +A D      V +K I      F+  +D      EI +L 
Sbjct: 51  IPDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRV---FEDLIDCKRILREIAILN 107

Query: 466 LVNKNDPADEH-HILRLYDYFY-----HLEHLFIVCELLRANLYEFQKFNQE 511
            +N       H H++++ D          + L++V E+  ++  +  +    
Sbjct: 108 RLN-------HDHVVKVLDIVIPKDVEKFDELYVVLEIADSDFKKLFRTPVY 152

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292

 Score = 45.2 bits (108), Expect = 3e-05
 Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 11/88 (12%)

Query: 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIK--NDKDFFD-QSLDEIKLLKLVNKND 471
           +Y   E +G   +  VF+A++  T   V LK ++  +D +     +L EI LLK +    
Sbjct: 3   KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELK--- 59

Query: 472 PADEH-HILRLYDYFYHLEHLFIVCELL 498
               H +I+RL+D  +  + L +V E  
Sbjct: 60  ----HKNIVRLHDVLHSDKKLTLVFEFC 83

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317

 Score = 45.3 bits (108), Expect = 3e-05
 Identities = 25/87 (28%), Positives = 44/87 (50%), Gaps = 10/87 (11%)

Query: 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD--FFDQSLDEIKLLKLVNKNDP 472
           ++   E LG+  ++ V++  +  TGV V LK +K D +      ++ EI L+K +     
Sbjct: 6   QFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELK---- 61

Query: 473 ADEH-HILRLYDYFYHLEHLFIVCELL 498
              H +I+RLYD  +    L +V E +
Sbjct: 62  ---HENIVRLYDVIHTENKLTLVFEFM 85

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346

 Score = 45.3 bits (108), Expect = 3e-05
 Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 14/91 (15%)

Query: 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQ------SLDEIKLLKLVN 468
           RY   ++LG   F+ V++A+D +T   V +K IK       +      +L EIKLL+ ++
Sbjct: 11  RYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELS 70

Query: 469 KNDPADEH-HILRLYDYFYHLEHLFIVCELL 498
                  H +I+ L D F H  ++ +V + +
Sbjct: 71  -------HPNIIGLLDAFGHKSNISLVFDFM 94

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score = 45.4 bits (107), Expect = 3e-05
 Identities = 14/103 (13%), Positives = 32/103 (31%), Gaps = 11/103 (10%)

Query: 403 DLPIILNTVIAGRYYVT---EYLGSAAFSKVFQAQDLHTGVDVCLKII----KNDKDFFD 455
             P  + + +  R         LG        +A D  TG    + +     +   +   
Sbjct: 64  GQPFRVESELGERPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIK 123

Query: 456 QSLDEIKLLKLV----NKNDPADEHHILRLYDYFYHLEHLFIV 494
           Q  +E+  L+L+    N+         +  +D     +   ++
Sbjct: 124 QMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQKKKMI 166

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ... Length = 299

 Score = 44.8 bits (107), Expect = 4e-05
 Identities = 24/88 (27%), Positives = 43/88 (48%), Gaps = 11/88 (12%)

Query: 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIK--NDKDFFD-QSLDEIKLLKLVNKND 471
            +   E +G   +  V++A++  TG  V LK I+   + +     ++ EI LLK +N   
Sbjct: 4   NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN--- 60

Query: 472 PADEH-HILRLYDYFYHLEHLFIVCELL 498
               H +I++L D  +    L++V E L
Sbjct: 61  ----HPNIVKLLDVIHTENKLYLVFEFL 84

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score = 45.5 bits (108), Expect = 4e-05
 Identities = 24/102 (23%), Positives = 47/102 (46%), Gaps = 22/102 (21%)

Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIK--------------NDKDFFDQS 457
           I   Y+    LGS A+ +V   ++ +   +  +K+IK              N + F ++ 
Sbjct: 34  IGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEI 93

Query: 458 LDEIKLLKLVNKNDPADEH-HILRLYDYFYHLEHLFIVCELL 498
            +EI LLK ++       H +I++L+D F   ++ ++V E  
Sbjct: 94  YNEISLLKSLD-------HPNIIKLFDVFEDKKYFYLVTEFY 128

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* Length = 432

 Score = 45.1 bits (107), Expect = 4e-05
 Identities = 24/112 (21%), Positives = 46/112 (41%), Gaps = 22/112 (19%)

Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLD------EIKLLK 465
           +   Y +   +G  ++  V+ A D +T  +V +K +      F+  +D      EI +L 
Sbjct: 24  VPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNR---MFEDLIDCKRILREITILN 80

Query: 466 LVNKNDPADEH-HILRLYDYFY-----HLEHLFIVCELLRANLYEFQKFNQE 511
            +          +I+RLYD          + L+IV E+  ++L +  K    
Sbjct: 81  RLK-------SDYIIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFKTPIF 125

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score = 44.6 bits (106), Expect = 4e-05
 Identities = 23/89 (25%), Positives = 38/89 (42%), Gaps = 10/89 (11%)

Query: 413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKN 470
              Y + E +GS A + V  A        V +K I  +K     D+ L EI+ +   +  
Sbjct: 14  RDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCH-- 71

Query: 471 DPADEH-HILRLYDYFYHLEHLFIVCELL 498
                H +I+  Y  F   + L++V +LL
Sbjct: 72  -----HPNIVSYYTSFVVKDELWLVMKLL 95

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score = 44.3 bits (105), Expect = 5e-05
 Identities = 15/80 (18%), Positives = 29/80 (36%), Gaps = 12/80 (15%)

Query: 420 EYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEH-HI 478
             +G  +F +V + +D  TG    +K +          ++E+     ++          I
Sbjct: 64  PRVGRGSFGEVHRMKDKQTGFQCAVKKV----RLEVFRVEELVACAGLS-------SPRI 112

Query: 479 LRLYDYFYHLEHLFIVCELL 498
           + LY        + I  ELL
Sbjct: 113 VPLYGAVREGPWVNIFMELL 132

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score = 44.8 bits (106), Expect = 6e-05
 Identities = 23/109 (21%), Positives = 44/109 (40%), Gaps = 28/109 (25%)

Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIK----NDKDFFDQSLDEIKLLKLV 467
           +   Y + E LG+ AF  V +  +  TG +   K +     +DK+   +   EI+ + ++
Sbjct: 155 VLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRK---EIQTMSVL 211

Query: 468 NKNDPADEH-HILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGE 515
                   H  ++ L+D F     + ++ E +             SGGE
Sbjct: 212 R-------HPTLVNLHDAFEDDNEMVMIYEFM-------------SGGE 240

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} Length = 388

 Score = 44.3 bits (105), Expect = 6e-05
 Identities = 21/100 (21%), Positives = 47/100 (47%), Gaps = 16/100 (16%)

Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLD------EIKLLK 465
           +  +Y + + LG  A+  V+++ D  TG  V +K I +    F  S D      EI +L 
Sbjct: 7   VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFD---AFQNSTDAQRTFREIMILT 63

Query: 466 LVNKNDPADEHHILRLYDYFY--HLEHLFIVCELLRANLY 503
            ++ ++     +I+ L +     +   +++V + +  +L+
Sbjct: 64  ELSGHE-----NIVNLLNVLRADNDRDVYLVFDYMETDLH 98

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353

 Score = 44.2 bits (105), Expect = 7e-05
 Identities = 21/105 (20%), Positives = 40/105 (38%), Gaps = 23/105 (21%)

Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLD------EIKLLK 465
           +   Y    ++GS A+  V  A D  +G  V +K +      F   +       E+ LLK
Sbjct: 22  LPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSR---PFQSEIFAKRAYRELLLLK 78

Query: 466 LVN-KNDPADEHHILRLYDYFY------HLEHLFIVCELLRANLY 503
            +  +N       ++ L D F       +    ++V   ++ +L 
Sbjct: 79  HMQHEN-------VIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQ 116

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score = 44.3 bits (105), Expect = 7e-05
 Identities = 24/103 (23%), Positives = 40/103 (38%), Gaps = 22/103 (21%)

Query: 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSL-DEIKLLKLVNKNDPA 473
            Y + E LGS AF  V +  +  TG     K I         ++ +EI ++  ++     
Sbjct: 52  YYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLH----- 106

Query: 474 DEH-HILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGE 515
             H  ++ L+D F     + ++ E L             SGGE
Sbjct: 107 --HPKLINLHDAFEDKYEMVLILEFL-------------SGGE 134

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* Length = 353

 Score = 44.2 bits (105), Expect = 8e-05
 Identities = 25/104 (24%), Positives = 46/104 (44%), Gaps = 23/104 (22%)

Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLD------EIKLLK 465
           I+  + +   LG  A+  V  A    TG  V +K I+     FD+ L       EIK+LK
Sbjct: 9   ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEP----FDKPLFALRTLREIKILK 64

Query: 466 LVN-KNDPADEHHILRLYDYFY-----HLEHLFIVCELLRANLY 503
               +N       I+ +++        +   ++I+ EL++ +L+
Sbjct: 65  HFKHEN-------IITIFNIQRPDSFENFNEVYIIQELMQTDLH 101

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score = 43.9 bits (104), Expect = 8e-05
 Identities = 19/92 (20%), Positives = 40/92 (43%), Gaps = 11/92 (11%)

Query: 413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDP 472
           AG + + E +G+  + +V++ + + TG    +K++    D  ++   EI +LK       
Sbjct: 23  AGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLK-----KY 77

Query: 473 ADEHHILRLYDYFYHL------EHLFIVCELL 498
           +   +I   Y  F         + L++V E  
Sbjct: 78  SHHRNIATYYGAFIKKNPPGMDDQLWLVMEFC 109

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A 3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A* 2oji_A* ... Length = 364

 Score = 43.8 bits (104), Expect = 8e-05
 Identities = 25/104 (24%), Positives = 41/104 (39%), Gaps = 23/104 (22%)

Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLD------EIKLLK 465
           +  RY    Y+G  A+  V  A D    V V +K I      F+          EIK+L 
Sbjct: 25  VGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISP----FEHQTYCQRTLREIKILL 80

Query: 466 LVN-KNDPADEHHILRLYDYFY-----HLEHLFIVCELLRANLY 503
               +N       I+ + D         ++ ++IV +L+  +LY
Sbjct: 81  RFRHEN-------IIGINDIIRAPTIEQMKDVYIVQDLMETDLY 117

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score = 43.5 bits (103), Expect = 1e-04
 Identities = 15/87 (17%), Positives = 37/87 (42%), Gaps = 11/87 (12%)

Query: 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIK-NDKDFFDQSLDEIKLLKLVNKNDPA 473
                  +G  +   V  A++ H+G  V +K++    +   +   +E+ +++        
Sbjct: 46  LLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMR-------- 97

Query: 474 DEHH--ILRLYDYFYHLEHLFIVCELL 498
           D  H  ++ +Y  +   E L+++ E L
Sbjct: 98  DYQHFNVVEMYKSYLVGEELWVLMEFL 124

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score = 43.8 bits (103), Expect = 1e-04
 Identities = 16/127 (12%), Positives = 35/127 (27%), Gaps = 17/127 (13%)

Query: 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIK--------LLKL 466
                  LG        +A D  TG    + +    +     ++ ++K        L  +
Sbjct: 74  TLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGI 133

Query: 467 VNKNDPADEHHILRLYDYFYHLEHLFIVCELLRAN---------LYEFQKFNQESGGEAY 517
            N+         +  +D     +   ++   L            LY   + N ++ GE  
Sbjct: 134 KNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVL 193

Query: 518 FTLGRLQ 524
            +     
Sbjct: 194 LSHSSTH 200

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score = 43.5 bits (103), Expect = 1e-04
 Identities = 21/88 (23%), Positives = 37/88 (42%), Gaps = 8/88 (9%)

Query: 413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKII--KNDKDFFDQSLDEIKLLKLVNKN 470
              +   E +G  +F +VF+  D  T   V +KII  +  +D  +    EI +L      
Sbjct: 21  EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQC--- 77

Query: 471 DPADEHHILRLYDYFYHLEHLFIVCELL 498
              D  ++ + Y  +     L+I+ E L
Sbjct: 78  ---DSPYVTKYYGSYLKDTKLWIIMEYL 102

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329

 Score = 43.4 bits (103), Expect = 1e-04
 Identities = 21/88 (23%), Positives = 40/88 (45%), Gaps = 11/88 (12%)

Query: 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIK--NDKDFFDQ-SLDEIKLLKLVNKND 471
           RY     LG   + +V++A D  T   V +K I+  ++++     ++ E+ LLK +    
Sbjct: 35  RYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQ--- 91

Query: 472 PADEH-HILRLYDYFYHLEHLFIVCELL 498
               H +I+ L    +H   L ++ E  
Sbjct: 92  ----HRNIIELKSVIHHNHRLHLIFEYA 115

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371

 Score = 43.5 bits (103), Expect = 1e-04
 Identities = 28/102 (27%), Positives = 41/102 (40%), Gaps = 23/102 (22%)

Query: 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLD------EIKLLKLVN 468
           RY   + +GS A   V  A D     +V +K +      F           E+ L+K VN
Sbjct: 26  RYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR---PFQNQTHAKRAYRELVLMKCVN 82

Query: 469 -KNDPADEHHILRLYDYFY------HLEHLFIVCELLRANLY 503
            KN       I+ L + F         + ++IV EL+ ANL 
Sbjct: 83  HKN-------IIGLLNVFTPQKSLEEFQDVYIVMELMDANLC 117

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score = 43.2 bits (102), Expect = 1e-04
 Identities = 12/88 (13%), Positives = 32/88 (36%), Gaps = 10/88 (11%)

Query: 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKII----KNDKDFFDQSLDEIKLLKLVNKN 470
            +     +G  +F  V+ A+D+     V +K +    K   + +   + E++ L+     
Sbjct: 55  LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQ----- 109

Query: 471 DPADEHHILRLYDYFYHLEHLFIVCELL 498
                 + ++    +      ++V E  
Sbjct: 110 -KLRHPNTIQYRGCYLREHTAWLVMEYC 136

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367

 Score = 43.1 bits (102), Expect = 1e-04
 Identities = 23/105 (21%), Positives = 39/105 (37%), Gaps = 23/105 (21%)

Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLD------EIKLLK 465
           +   Y   + +GS A+  V  A D  TG  V +K +      F   L       E++LLK
Sbjct: 23  VRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYR---PFQSELFAKRAYRELRLLK 79

Query: 466 LVN-KNDPADEHHILRLYDYFY------HLEHLFIVCELLRANLY 503
            +  +N       ++ L D F            ++V   +  +L 
Sbjct: 80  HMRHEN-------VIGLLDVFTPDETLDDFTDFYLVMPFMGTDLG 117

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} Length = 345

 Score = 43.2 bits (102), Expect = 2e-04
 Identities = 20/133 (15%), Positives = 44/133 (33%), Gaps = 15/133 (11%)

Query: 392 RKNRTGFEENKDLP--IILNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKN 449
                 + ++   P   +L+ +   ++ + + +GS  F  ++ A   +        ++K 
Sbjct: 13  LGTENLYFQSMPFPEGKVLDDMEGNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKV 72

Query: 450 DKDFFDQSLDEIKLLKLVNKNDPADEHH---------ILRLYDYFYHL----EHLFIVCE 496
           +         E+K  + V K D   +           I   Y           + F+V E
Sbjct: 73  EYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGSGLTEFKGRSYRFMVME 132

Query: 497 LLRANLYEFQKFN 509
            L  +L +    N
Sbjct: 133 RLGIDLQKISGQN 145

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score = 42.6 bits (101), Expect = 2e-04
 Identities = 25/109 (22%), Positives = 44/109 (40%), Gaps = 28/109 (25%)

Query: 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLD-------EIKLLKLV 467
            Y + E LGS  F+ V + +   TG +   K IK  +    +          E+ +L+ +
Sbjct: 6   HYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREI 65

Query: 468 NKNDPADEH-HILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGE 515
                   H +I+ L+D F +   + ++ EL+             SGGE
Sbjct: 66  R-------HPNIITLHDIFENKTDVVLILELV-------------SGGE 94

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320

 Score = 42.6 bits (101), Expect = 2e-04
 Identities = 25/119 (21%), Positives = 41/119 (34%), Gaps = 21/119 (17%)

Query: 394 NRTGFEENKDLPIILNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLK-IIKNDKD 452
           N  GF+            +  RY   + LG      VF A D      V +K I+  D  
Sbjct: 3   NIHGFD------------LGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQ 50

Query: 453 FFDQSLDEIKLLKLVN-KN-------DPADEHHILRLYDYFYHLEHLFIVCELLRANLY 503
               +L EIK+++ ++  N              +         L  ++IV E +  +L 
Sbjct: 51  SVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLA 109

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score = 42.6 bits (101), Expect = 2e-04
 Identities = 24/109 (22%), Positives = 46/109 (42%), Gaps = 28/109 (25%)

Query: 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLD-------EIKLLKLV 467
            Y + E LGS  F+ V + ++  TG++   K IK  +    +          E+ +L+ V
Sbjct: 13  FYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQV 72

Query: 468 NKNDPADEH-HILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGE 515
                   H +++ L+D + +   + ++ EL+             SGGE
Sbjct: 73  L-------HHNVITLHDVYENRTDVVLILELV-------------SGGE 101

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score = 42.7 bits (101), Expect = 2e-04
 Identities = 25/109 (22%), Positives = 46/109 (42%), Gaps = 28/109 (25%)

Query: 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIK-------NDKDFFDQSLDEIKLLKLV 467
            Y + E LGS  F+ V + ++  TG++   K IK             ++   E+ +L+ V
Sbjct: 13  FYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQV 72

Query: 468 NKNDPADEH-HILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGE 515
                   H +I+ L+D + +   + ++ EL+             SGGE
Sbjct: 73  L-------HPNIITLHDVYENRTDVVLILELV-------------SGGE 101

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score = 42.3 bits (100), Expect = 2e-04
 Identities = 18/87 (20%), Positives = 40/87 (45%), Gaps = 11/87 (12%)

Query: 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIK-NDKDFFDQSLDEIKLLKLVNKNDPA 473
           +Y   E +G  A   V+ A D+ TG +V ++ +    +   +  ++EI +++        
Sbjct: 21  KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMR-------- 72

Query: 474 DEHH--ILRLYDYFYHLEHLFIVCELL 498
           +  +  I+   D +   + L++V E L
Sbjct: 73  ENKNPNIVNYLDSYLVGDELWVVMEYL 99

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score = 42.7 bits (100), Expect = 2e-04
 Identities = 15/103 (14%), Positives = 28/103 (27%), Gaps = 8/103 (7%)

Query: 414 GRYYVT-EYLGSAAFSKVFQAQDLHTGVDVCLKII----KNDKDFFDQSLDEIKLLKLVN 468
            R     E L     S VF  +D+    D  LK+     +N +   ++  +       + 
Sbjct: 61  ERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLL 120

Query: 469 KNDPAD---EHHILRLYDYFYHLEHLFIVCELLRANLYEFQKF 508
              P +      +L   D                 + Y    +
Sbjct: 121 GESPEEARDRRRLLLPSDAVAVQSQPPFAQLSPGQDDYAVANY 163

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score = 42.6 bits (100), Expect = 2e-04
 Identities = 16/80 (20%), Positives = 27/80 (33%), Gaps = 11/80 (13%)

Query: 423 GSAAFSKVFQAQDLHTGVDVCLKII---KNDKDFFDQSLDEIKLLKLVNKNDPADEH-HI 478
           G      V  A+   TG  V ++ I       +       E+ + KL N       H +I
Sbjct: 36  GFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFN-------HPNI 88

Query: 479 LRLYDYFYHLEHLFIVCELL 498
           +     F     L++V   +
Sbjct: 89  VPYRATFIADNELWVVTSFM 108

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score = 42.2 bits (100), Expect = 3e-04
 Identities = 22/133 (16%), Positives = 47/133 (35%), Gaps = 28/133 (21%)

Query: 391 HRKNRTGFEENKDLPIILNTV--IAGRYYVT-EYLGSAAFSKVFQAQDLHTGVDVCLKII 447
           H  + +   +     +   ++      Y +T + LG   F+ V Q     TG +   K +
Sbjct: 3   HHHHHSSGVDLGTENLYFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFL 62

Query: 448 KNDKDFFDQSLD---EIKLLKLVNKNDPADEHH--ILRLYDYFYHLEHLFIVCELLRANL 502
           K  +   D   +   EI +L+L             ++ L++ + +   + ++ E      
Sbjct: 63  KKRRRGQDCRAEILHEIAVLELAK-------SCPRVINLHEVYENTSEIILILEYA---- 111

Query: 503 YEFQKFNQESGGE 515
                    +GGE
Sbjct: 112 ---------AGGE 115

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score = 42.4 bits (100), Expect = 3e-04
 Identities = 26/102 (25%), Positives = 45/102 (44%), Gaps = 28/102 (27%)

Query: 419 TEYLGSAAFSKVFQAQDLHTGVDVCLKIIK----NDKDFFDQSLDEIKLLKLVNKNDPAD 474
           TE LG   F +V + ++  TG+ +  KIIK     DK+      +EI ++  ++      
Sbjct: 94  TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEV---KNEISVMNQLD------ 144

Query: 475 EH-HILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGE 515
            H ++++LYD F     + +V E +              GGE
Sbjct: 145 -HANLIQLYDAFESKNDIVLVMEYV-------------DGGE 172

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score = 41.9 bits (99), Expect = 3e-04
 Identities = 22/88 (25%), Positives = 43/88 (48%), Gaps = 9/88 (10%)

Query: 413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIK-NDKDFFDQSLDEIKLLKLVNKND 471
              + +   LG  AF KV++A++  TG     K+I+   ++  +  + EI++L   +   
Sbjct: 18  NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCD--- 74

Query: 472 PADEH-HILRLYDYFYHLEHLFIVCELL 498
               H +I++L   +YH   L+I+ E  
Sbjct: 75  ----HPYIVKLLGAYYHDGKLWIMIEFC 98

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score = 41.9 bits (99), Expect = 3e-04
 Identities = 20/105 (19%), Positives = 37/105 (35%), Gaps = 9/105 (8%)

Query: 395 RTGFEENKDLPIILNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIK-NDKDF 453
           R+  E + +  ++              LG   +  V+  +DL   V + +K I   D  +
Sbjct: 3   RSTEEGDCESDLLEYDYEYDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRY 62

Query: 454 FDQSLDEIKLLKLVNKNDPADEH-HILRLYDYFYHLEHLFIVCEL 497
                +EI L K +        H +I++    F     + I  E 
Sbjct: 63  SQPLHEEIALHKHLK-------HKNIVQYLGSFSENGFIKIFMEQ 100

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score = 41.9 bits (99), Expect = 3e-04
 Identities = 21/111 (18%), Positives = 44/111 (39%), Gaps = 26/111 (23%)

Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLD-------EIKLL 464
           +   Y   E LGS  F+ V + ++  TG+    K IK  +    +          E+ +L
Sbjct: 9   VDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSIL 68

Query: 465 KLVNKNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGE 515
           K +         +++ L++ + +   + ++ EL+             +GGE
Sbjct: 69  KEI------QHPNVITLHEVYENKTDVILILELV-------------AGGE 100

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 41.6 bits (98), Expect = 4e-04
 Identities = 17/89 (19%), Positives = 35/89 (39%), Gaps = 10/89 (11%)

Query: 420 EYLGSAAFSKVFQAQDLHTGVDVCLKIIKN-DKDFFDQSLDEIKLLKLVNKNDPADEH-H 477
           E LG   F +  +     TG  + +K +   D++     L E+K+++ +        H +
Sbjct: 16  EVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLE-------HPN 68

Query: 478 ILRLYDYFYHLEHLFIVCELL-RANLYEF 505
           +L+     Y  + L  + E +    L   
Sbjct: 69  VLKFIGVLYKDKRLNFITEYIKGGTLRGI 97

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288

 Score = 41.3 bits (98), Expect = 4e-04
 Identities = 23/88 (26%), Positives = 44/88 (50%), Gaps = 12/88 (13%)

Query: 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIK--NDKDFFDQS-LDEIKLLKLVNKND 471
           +Y+  E +G   +  V++AQ+ + G    LK I+   + +    + + EI +LK +    
Sbjct: 3   KYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELK--- 58

Query: 472 PADEH-HILRLYDYFYHLEHLFIVCELL 498
               H +I++LYD  +  + L +V E L
Sbjct: 59  ----HSNIVKLYDVIHTKKRLVLVFEHL 82

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464

 Score = 41.8 bits (98), Expect = 5e-04
 Identities = 27/102 (26%), Positives = 41/102 (40%), Gaps = 23/102 (22%)

Query: 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLD------EIKLLKLVN 468
           RY   + +GS A   V  A D     +V +K +      F           E+ L+K VN
Sbjct: 63  RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSR---PFQNQTHAKRAYRELVLMKCVN 119

Query: 469 -KNDPADEHHILRLYDYFY------HLEHLFIVCELLRANLY 503
            KN       I+ L + F         + +++V EL+ ANL 
Sbjct: 120 HKN-------IISLLNVFTPQKTLEEFQDVYLVMELMDANLC 154

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308

 Score = 41.0 bits (97), Expect = 6e-04
 Identities = 22/94 (23%), Positives = 41/94 (43%), Gaps = 16/94 (17%)

Query: 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIK--NDKDFFDQ----SLDEIKLLKLVN 468
           RY     +G  A+  V++A+D H+G  V LK ++  N           ++ E+ LL+ + 
Sbjct: 10  RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLE 69

Query: 469 KNDPADEH-HILRLYDYFYHLEH-----LFIVCE 496
             +    H +++RL D            + +V E
Sbjct: 70  AFE----HPNVVRLMDVCATSRTDREIKVTLVFE 99

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score = 40.8 bits (96), Expect = 8e-04
 Identities = 20/84 (23%), Positives = 39/84 (46%), Gaps = 7/84 (8%)

Query: 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPAD 474
            + V E LG  ++  V++A    TG  V +K +  + D   + + EI +++        D
Sbjct: 30  VFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESD-LQEIIKEISIMQ------QCD 82

Query: 475 EHHILRLYDYFYHLEHLFIVCELL 498
             H+++ Y  ++    L+IV E  
Sbjct: 83  SPHVVKYYGSYFKNTDLWIVMEYC 106

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311

 Score = 40.6 bits (96), Expect = 9e-04
 Identities = 23/88 (26%), Positives = 41/88 (46%), Gaps = 12/88 (13%)

Query: 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIK--NDKDFFD-QSLDEIKLLKLVNKND 471
           +Y   E +G   +  V++A+D   G  V LK I+   + +     ++ EI LLK ++   
Sbjct: 22  KYQKLEKVGEGTYGVVYKAKD-SQGRIVALKRIRLDAEDEGIPSTAIREISLLKELH--- 77

Query: 472 PADEH-HILRLYDYFYHLEHLFIVCELL 498
               H +I+ L D  +    L +V E +
Sbjct: 78  ----HPNIVSLIDVIHSERCLTLVFEFM 101

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	552
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	99.93
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	99.93
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	99.93
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	99.92
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	99.92
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	99.92
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.91
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	99.91
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	99.9
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	99.9
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	99.9
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	99.89
4aoj_A	329	High affinity nerve growth factor receptor; transf	99.89
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	99.89
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	99.88
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	99.88
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	99.88
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	99.88
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	99.87
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.87
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	99.87
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	99.87
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.86
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	99.86
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.86
3uqc_A	286	Probable conserved transmembrane protein; structur	99.86
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.85
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	99.85
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.85
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.85
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.85
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	99.85
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	99.85
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.84
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.84
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	99.84
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	99.84
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	99.84
3niz_A	311	Rhodanese family protein; structural genomics, str	99.84
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.84
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.84
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.84
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	99.84
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.84
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.84
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.84
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	99.84
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	99.84
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.83
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.83
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.83
3rp9_A	458	Mitogen-activated protein kinase; structural genom	99.83
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	99.83
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.83
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.83
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	99.83
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	99.83
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.83
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.83
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	99.83
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.83
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.83
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	99.83
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.83
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	99.83
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	99.83
3bhy_A	283	Death-associated protein kinase 3; death associate	99.83
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.83
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.83
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.83
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.83
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.83
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	99.82
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.82
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.82
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	99.82
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.82
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.82
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.82
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.82
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.82
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.82
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.82
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.82
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.82
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.82
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.82
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.82
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	99.82
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.82
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.82
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.82
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.82
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.82
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.82
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.82
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.82
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.82
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.82
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.82
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.82
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.82
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.82
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.81
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.81
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.81
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	99.81
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.81
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.81
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.81
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.81
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.81
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	99.81
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.81
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.81
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.81
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.81
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.81
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.81
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.81
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.81
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	99.81
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.81
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.8
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.8
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	99.8
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	99.8
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.8
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	99.8
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.8
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.8
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.8
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.8
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.8
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.8
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.8
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.8
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.8
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.8
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.8
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	99.8
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.8
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.8
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.8
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.8
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.8
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	99.8
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.8
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.8
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	99.8
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.8
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.8
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.8
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.8
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	99.79
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.79
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.79
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.79
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.79
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	99.79
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.79
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.79
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.79
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.79
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.79
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	99.79
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.79
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.79
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.79
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.79
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.79
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.79
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.79
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.79
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.79
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	99.78
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.78
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.78
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	99.78
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.78
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.78
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.78
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.78
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.78
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.78
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.78
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.78
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.78
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	99.78
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.78
3q4u_A	301	Activin receptor type-1; structural genomics conso	99.78
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.78
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.78
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	99.78
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.78
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.77
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.77
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.77
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.77
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.77
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	99.77
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	99.77
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.77
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	99.77
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.77
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	99.77
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.77
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	99.77
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.77
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	99.77
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.77
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.77
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	99.77
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.76
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.76
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.76
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	99.76
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	99.76
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.76
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.76
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	99.76
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	99.76
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.76
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.76
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.76
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	99.76
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.75
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.75
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.75
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.75
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.75
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	99.74
2dyl_A	318	Dual specificity mitogen-activated protein kinase	99.74
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.74
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.74
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.74
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.73
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.73
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.73
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.72
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	99.72
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.72
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.72
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.71
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.71
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.71
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.7
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.69
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.66
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.63
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	99.56
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	99.55
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	99.53
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.5
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	99.35
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	98.58
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	98.04
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	97.78
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	96.79
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	96.71
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	96.7
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	96.1
2olc_A	397	MTR kinase, methylthioribose kinase; kinase ADP-2H	95.86
3d1u_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	95.69
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	95.21
3jr1_A	312	Putative fructosamine-3-kinase; YP_719053.1, struc	94.21
3ats_A	357	Putative uncharacterized protein; hypothetical pro	93.12
2pyw_A	420	Uncharacterized protein; 5-methylthioribose kinase	85.33
3f7w_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	84.2
3feg_A	379	Choline/ethanolamine kinase; non-protein kinase, c	83.08
2q83_A	346	YTAA protein; 2635576, structural genomics, joint	81.85

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=99.93  E-value=1.4e-25  Score=233.54  Aligned_cols=126  Identities=14%  Similarity=0.177  Sum_probs=109.9

Q ss_pred             CceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC---hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCE
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH  490 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s---k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~h  490 (552)
                      +||++++.||+|+||+||+|+++.+++.||||+++..   ....+.+.+|+++|+.|+|      ||||+++++|.+.+.
T Consensus        24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~H------pnIV~~~~~~~~~~~   97 (350)
T 4b9d_A           24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKH------PNIVQYRESFEENGS   97 (350)
T ss_dssp             CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCC------TTBCCEEEEEEETTE
T ss_pred             cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCC------CCCCcEEEEEEECCE
Confidence            6899999999999999999999999999999999764   3345788999999999998      999999999999999


Q ss_pred             EEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          491 LFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       491 LyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      +|||||||.| +|.++|+..+..    .+++.+++.|+.||+.||.|||++||||+|||+
T Consensus        98 ~yiVmEy~~gg~L~~~i~~~~~~----~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp  153 (350)
T 4b9d_A           98 LYIVMDYCEGGDLFKRINAQKGV----LFQEDQILDWFVQICLALKHVHDRKILHRDIKS  153 (350)
T ss_dssp             EEEEEECCTTCBHHHHHHHTTTC----CCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCG
T ss_pred             EEEEEeCCCCCcHHHHHHHcCCC----CCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCH
Confidence            9999999986 999999865532    289999999999999999999999999999997

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=99.93  E-value=1.2e-25  Score=226.52  Aligned_cols=124  Identities=23%  Similarity=0.338  Sum_probs=110.9

Q ss_pred             CceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC----hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCC
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND----KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE  489 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s----k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~  489 (552)
                      ++|++++.||+|+||+||+|+++.+++.||||++++.    ......+.+|+++|+.|+|      ||||+++++|.+.+
T Consensus        13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~H------pnIv~~~~~~~~~~   86 (275)
T 3hyh_A           13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRH------PHIIKLYDVIKSKD   86 (275)
T ss_dssp             -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCC------TTBCCEEEEEECSS
T ss_pred             eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCC------CCCCeEEEEEEECC
Confidence            6899999999999999999999999999999999764    2334678999999999998      99999999999999


Q ss_pred             EEEEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          490 HLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       490 hLyIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ++|||||||+|+|.+++..++.      +++.+++.|++||+.||+|||++||||+|||+
T Consensus        87 ~~~ivmEy~~g~L~~~l~~~~~------l~e~~~~~~~~qi~~al~ylH~~~IiHRDiKP  140 (275)
T 3hyh_A           87 EIIMVIEYAGNELFDYIVQRDK------MSEQEARRFFQQIISAVEYCHRHKIVHRDLKP  140 (275)
T ss_dssp             EEEEEEECCCEEHHHHHHHSCS------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCT
T ss_pred             EEEEEEeCCCCCHHHHHHHcCC------CCHHHHHHHHHHHHHHHHHHHHCCcccccCCh
Confidence            9999999998899999987653      99999999999999999999999999999997

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=99.93  E-value=1.4e-25  Score=230.16  Aligned_cols=124  Identities=17%  Similarity=0.208  Sum_probs=115.0

Q ss_pred             CceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC----hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCC
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND----KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE  489 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s----k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~  489 (552)
                      ++|++++.||+|+||+||+|+++.+++.||||++.+.    ....+.+.+|+++|+.|+|      ||||+++++|.+.+
T Consensus        32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~H------pnIv~l~~~~~~~~  105 (311)
T 4aw0_A           32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH------PFFVKLYFTFQDDE  105 (311)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCC------TTBCCEEEEEECSS
T ss_pred             cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCC------CCCCeEEEEEEeCC
Confidence            4699999999999999999999999999999999854    2245678999999999998      99999999999999


Q ss_pred             EEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          490 HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       490 hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ++|||||||.| +|.++|+..+.      +++..++.|++||+.||.|||++||||+|||+
T Consensus       106 ~~yivmEy~~gG~L~~~i~~~~~------l~e~~~~~~~~qi~~al~ylH~~~IiHRDlKP  160 (311)
T 4aw0_A          106 KLYFGLSYAKNGELLKYIRKIGS------FDETCTRFYTAEIVSALEYLHGKGIIHRDLKP  160 (311)
T ss_dssp             EEEEEECCCTTEEHHHHHHHHSS------CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSG
T ss_pred             EEEEEEecCCCCCHHHHHHHcCC------CCHHHHHHHHHHHHHHHHHHHHCCCccCCCCH
Confidence            99999999987 99999987654      99999999999999999999999999999997

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=99.92  E-value=4.6e-25  Score=229.37  Aligned_cols=124  Identities=15%  Similarity=0.166  Sum_probs=113.7

Q ss_pred             cCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecCh-hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEE
Q 008813          413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK-DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL  491 (552)
Q Consensus       413 ~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk-~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hL  491 (552)
                      ..+|+++++||+|+||+||+|+++.+++.||||++.... ...+.+.+|+.+|+.|+|      ||||+++++|.+.+++
T Consensus        73 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~H------pnIV~l~~~~~~~~~~  146 (346)
T 4fih_A           73 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQH------ENVVEMYNSYLVGDEL  146 (346)
T ss_dssp             GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCC------TTBCCEEEEEEETTEE
T ss_pred             hHhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCC------CCCCcEEEEEEECCEE
Confidence            357999999999999999999999999999999997542 234568899999999998      9999999999999999


Q ss_pred             EEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          492 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       492 yIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      |||||||.| +|.++++..+       +++.+++.|+.||+.||.|||++||||+|||+
T Consensus       147 ~ivmEy~~gg~L~~~l~~~~-------l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp  198 (346)
T 4fih_A          147 WVVMEFLEGGALTDIVTHTR-------MNEEQIAAVCLAVLQALSVLHAQGVIHRDIKS  198 (346)
T ss_dssp             EEEECCCTTEEHHHHHHHSC-------CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSG
T ss_pred             EEEEeCCCCCcHHHHHHcCC-------CCHHHHHHHHHHHHHHHHHHHHCCcccccCCH
Confidence            999999987 9999997632       89999999999999999999999999999997

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=99.92  E-value=1.3e-24  Score=231.46  Aligned_cols=124  Identities=15%  Similarity=0.166  Sum_probs=114.2

Q ss_pred             cCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecCh-hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEE
Q 008813          413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK-DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL  491 (552)
Q Consensus       413 ~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk-~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hL  491 (552)
                      ..+|+++++||+|+||+||+|+++.+++.||||++.... ...+.+.+|+.+|+.|+|      ||||+++++|...+++
T Consensus       150 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~H------pnIV~l~~~~~~~~~~  223 (423)
T 4fie_A          150 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQH------ENVVEMYNSYLVGDEL  223 (423)
T ss_dssp             GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCC------TTBCCEEEEEEETTEE
T ss_pred             hHhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCC------CCCCceEEEEEECCEE
Confidence            467999999999999999999999999999999997642 234678899999999998      9999999999999999


Q ss_pred             EEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          492 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       492 yIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      |||||||.| +|.++++..+       +++.+++.|++||+.||.|||++||||+|||+
T Consensus       224 ~iVmEy~~gG~L~~~i~~~~-------l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp  275 (423)
T 4fie_A          224 WVVMEFLEGGALTDIVTHTR-------MNEEQIAAVCLAVLQALSVLHAQGVIHRDIKS  275 (423)
T ss_dssp             EEEEECCTTEEHHHHHHHSC-------CCHHHHHHHHHHHHHHHHHHHHTTEECCCCST
T ss_pred             EEEEeCCCCCcHHHHHhccC-------CCHHHHHHHHHHHHHHHHHHHHCCeecccCCH
Confidence            999999987 9999997643       89999999999999999999999999999997

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=99.92  E-value=1.1e-24  Score=229.53  Aligned_cols=126  Identities=25%  Similarity=0.307  Sum_probs=113.6

Q ss_pred             ecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC---hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeC
Q 008813          412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL  488 (552)
Q Consensus       412 i~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s---k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~  488 (552)
                      +.+||++++.||+|+||+||+|+++.+|+.||||+|++.   ....+.+++|+++|+.|+|      ||||++++++...
T Consensus        52 i~~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~H------pnIv~l~~~~~~~  125 (398)
T 4b99_A           52 VGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKH------DNIIAIKDILRPT  125 (398)
T ss_dssp             CCSSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCC------TTBCCEEEECCCS
T ss_pred             CCCCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCC------CCcceEeeeeecc
Confidence            346899999999999999999999999999999999764   2344678899999999998      9999999998643


Q ss_pred             ------CEEEEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          489 ------EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       489 ------~hLyIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                            +++|||||||+|+|.+++..++.      +++..++.|++||+.||.|||++||||+|||+
T Consensus       126 ~~~~~~~~~~ivmE~~~g~L~~~i~~~~~------l~~~~~~~~~~qil~al~ylH~~~iiHRDlKP  186 (398)
T 4b99_A          126 VPYGEFKSVYVVLDLMESDLHQIIHSSQP------LTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKP  186 (398)
T ss_dssp             SCTTTCCCEEEEEECCSEEHHHHHTSSSC------CCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCG
T ss_pred             cccccCCEEEEEEeCCCCCHHHHHHhcCC------CCHHHHHHHHHHHHHHHHHHHHCcCcCCCcCc
Confidence                  68999999999999999986543      99999999999999999999999999999997

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=99.91  E-value=5.3e-24  Score=215.85  Aligned_cols=126  Identities=22%  Similarity=0.316  Sum_probs=112.2

Q ss_pred             ecCce-EEEEEeccCCceEEEEEEECCCCcEEEEEEEecC---hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEe
Q 008813          412 IAGRY-YVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH  487 (552)
Q Consensus       412 i~~RY-~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s---k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~  487 (552)
                      ..+|| ++.++||+|+||+||+|.++.+++.||||++...   ....+.+.+|+++|+.|+|      ||||+++++|..
T Consensus        23 ~~gr~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~H------pnIV~~~~~~~~   96 (290)
T 3fpq_A           23 NDGRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQH------PNIVRFYDSWES   96 (290)
T ss_dssp             TTSSEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCC------TTBCCEEEEEEE
T ss_pred             CCCceEEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCC------CCCCcEEEEEee
Confidence            34676 6778899999999999999999999999999753   3345678999999999998      999999999975


Q ss_pred             ----CCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCC--Ceeeeccc
Q 008813          488 ----LEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLL--VIYFILFC  549 (552)
Q Consensus       488 ----~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~g--IIH~~L~~  549 (552)
                          .+.+|||||||.+ +|.+++++...      +++..++.|++||+.||.|||+++  |||+|||+
T Consensus        97 ~~~~~~~~~lvmEy~~gg~L~~~l~~~~~------l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp  159 (290)
T 3fpq_A           97 TVKGKKCIVLVTELMTSGTLKTYLKRFKV------MKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKC  159 (290)
T ss_dssp             EETTEEEEEEEEECCCSCBHHHHHHHHSS------CCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCG
T ss_pred             ccCCCcEEEEEEeCCCCCCHHHHHHhcCC------CCHHHHHHHHHHHHHHHHHHHHCCCCEEecccCh
Confidence                3579999999987 99999987653      899999999999999999999998  99999997

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=99.91  E-value=2.2e-24  Score=223.36  Aligned_cols=120  Identities=17%  Similarity=0.110  Sum_probs=111.1

Q ss_pred             CceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEEEE
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFI  493 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hLyI  493 (552)
                      ..|++.++||+|+||+||+|+++.+++.||||+++....    ..+|+.+|+.|+|      ||||+++++|.+.+++||
T Consensus        58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~----~~~E~~il~~l~H------pnIV~l~~~~~~~~~~~i  127 (336)
T 4g3f_A           58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF----RVEELVACAGLSS------PRIVPLYGAVREGPWVNI  127 (336)
T ss_dssp             TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC----CTHHHHTTTTCCC------TTBCCEEEEEEETTEEEE
T ss_pred             hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh----HHHHHHHHHhCCC------CCCCcEEEEEEECCEEEE
Confidence            468999999999999999999999999999999986532    2479999999998      999999999999999999


Q ss_pred             EEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          494 VCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       494 VmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      |||||.| +|.++|+..+.      |++..++.|+.||+.||.|||++||||+|||+
T Consensus       128 vmEy~~gg~L~~~l~~~~~------l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp  178 (336)
T 4g3f_A          128 FMELLEGGSLGQLIKQMGC------LPEDRALYYLGQALEGLEYLHTRRILHGDVKA  178 (336)
T ss_dssp             EECCCTTCBHHHHHHHHSS------CCHHHHHHHHHHHHHHHHHHHTTTEECSCCCG
T ss_pred             EEeccCCCcHHHHHHHcCC------CCHHHHHHHHHHHHHHHHHHHHCCceecccCH
Confidence            9999987 99999987653      99999999999999999999999999999997

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=99.90  E-value=2.1e-24  Score=220.49  Aligned_cols=124  Identities=22%  Similarity=0.250  Sum_probs=106.7

Q ss_pred             CceEEEEEeccCCceEEEEEEEC---CCCcEEEEEEEecCh---hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEe
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDL---HTGVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH  487 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dk---ktg~~VAVKIIk~sk---~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~  487 (552)
                      .+|++++.||+|+||+||+|++.   .+++.||||++++..   .....+.+|+++|+.|+|      ||||+++++|.+
T Consensus        24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~H------pnIv~l~~~~~~   97 (304)
T 3ubd_A           24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNH------PFIVKLHYAFQT   97 (304)
T ss_dssp             GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCC------TTEECEEEEEEE
T ss_pred             cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCC------CCCCeEEEEEEE
Confidence            57999999999999999999984   467899999997641   123467889999999998      999999999999


Q ss_pred             CCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          488 LEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       488 ~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      .+++|||||||.| +|.++|++.+.      +++.+++.|++||+.||.|||++||||+|||+
T Consensus        98 ~~~~~ivmEy~~gg~L~~~l~~~~~------l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp  154 (304)
T 3ubd_A           98 EGKLYLILDFLRGGDLFTRLSKEVM------FTEEDVKFYLAELALALDHLHSLGIIYRDLKP  154 (304)
T ss_dssp             TTEEEEEECCCTTCEEHHHHHHHCC------CCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCG
T ss_pred             CCEEEEEEEcCCCCCHHHHHHhcCC------CCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCH
Confidence            9999999999987 99999987653      99999999999999999999999999999997

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=99.90  E-value=2e-23  Score=211.62  Aligned_cols=127  Identities=16%  Similarity=0.138  Sum_probs=108.4

Q ss_pred             CceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC--hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCC--
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE--  489 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s--k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~--  489 (552)
                      ..|++++.||+|+||+||+|+++.+++.||||+++..  ....+.+.+|+++|+.|+|      ||||+++++|...+  
T Consensus         5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~H------pnIV~~~~~~~~~~~~   78 (299)
T 4g31_A            5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEH------PGIVRYFNAWLEKNTT   78 (299)
T ss_dssp             HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCC------TTBCCEEEEEEEEC--
T ss_pred             hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCC------CCCCeEEEEEEecCcc
Confidence            3589999999999999999999999999999999753  3345678999999999998      99999999997543  


Q ss_pred             ----------EEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          490 ----------HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       490 ----------hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                                ++|||||||.+ +|.++++.+...   ...++..++.|+.||+.||.|||++||||+|||+
T Consensus        79 ~~~~~~~~~~~l~ivmE~~~gg~L~~~l~~~~~~---~~~~~~~~~~i~~qi~~al~ylH~~~IiHRDlKp  146 (299)
T 4g31_A           79 EKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTI---EERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKP  146 (299)
T ss_dssp             --------CEEEEEEEECCCSCCHHHHHHTCCSG---GGSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCG
T ss_pred             ccccccCCCcEEEEEEecCCCCcHHHHHHhcCCC---ChhHHHHHHHHHHHHHHHHHHHHHCcCccccCcH
Confidence                      58999999987 999999865421   1256677899999999999999999999999997

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=99.90  E-value=1.7e-23  Score=212.41  Aligned_cols=131  Identities=18%  Similarity=0.233  Sum_probs=110.6

Q ss_pred             cCceEEEEEeccCCceEEEEEEEC-----CCCcEEEEEEEecC-hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEE
Q 008813          413 AGRYYVTEYLGSAAFSKVFQAQDL-----HTGVDVCLKIIKND-KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFY  486 (552)
Q Consensus       413 ~~RY~Ile~LGkG~FG~VykA~Dk-----ktg~~VAVKIIk~s-k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~  486 (552)
                      ..+|.+.+.||+|+||+||+|++.     .+++.||||+++.. ....+.+.+|+++|++|+|      ||||++++++.
T Consensus        12 r~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H------pnIV~l~g~~~   85 (299)
T 4asz_A           12 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQH------EHIVKFYGVCV   85 (299)
T ss_dssp             GGGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCC------TTBCCEEEEEC
T ss_pred             HHHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCC------CCCccEEEEEe
Confidence            357999999999999999999875     35788999999864 3345778999999999998      99999999999


Q ss_pred             eCCEEEEEEecCCC-CHHHHHHhhcc-------CCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          487 HLEHLFIVCELLRA-NLYEFQKFNQE-------SGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       487 ~~~hLyIVmEll~G-sL~d~Lk~~~~-------~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ..+.+|||||||.+ +|.++|+..+.       ......|++.+++.|+.||+.||.|||+++|||+|||+
T Consensus        86 ~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDlKp  156 (299)
T 4asz_A           86 EGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLAT  156 (299)
T ss_dssp             SSSSEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSG
T ss_pred             eCCEEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccCH
Confidence            99999999999986 99999986431       01112499999999999999999999999999999997

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=99.89  E-value=5.9e-23  Score=225.31  Aligned_cols=128  Identities=16%  Similarity=0.175  Sum_probs=116.2

Q ss_pred             eecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecCh-hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCC
Q 008813          411 VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK-DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE  489 (552)
Q Consensus       411 vi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk-~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~  489 (552)
                      .+.++|++++.||+|+||+||+|+++.+|+.||||+++... ...+.+.+|+.+|+.|+|      ||||+|+++|...+
T Consensus       154 ~il~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~h------pnIv~l~~~~~~~~  227 (573)
T 3uto_A          154 HVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRH------PTLVNLHDAFEDDN  227 (573)
T ss_dssp             CGGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCC------TTBCCEEEEEECSS
T ss_pred             cCccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCC------CCCCeEEEEEEECC
Confidence            45578999999999999999999999999999999998653 345678899999999998      99999999999999


Q ss_pred             EEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          490 HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       490 hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ++|||||||.| +|.++|.....     .|++.+++.|++||+.||.|||++||||+|||+
T Consensus       228 ~~~iv~E~~~gg~L~~~i~~~~~-----~l~e~~~~~~~~qi~~al~ylH~~~iiHRDlKp  283 (573)
T 3uto_A          228 EMVMIYEFMSGGELFEKVADEHN-----KMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKP  283 (573)
T ss_dssp             EEEEEEECCCCCBHHHHHTCTTS-----CEEHHHHHHHHHHHHHHHHHHHHTTEECCCCCG
T ss_pred             EEEEEEeecCCCcHHHHHHHhCC-----CCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCh
Confidence            99999999987 99999875432     289999999999999999999999999999997

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=99.89  E-value=7.1e-23  Score=210.51  Aligned_cols=130  Identities=22%  Similarity=0.269  Sum_probs=112.1

Q ss_pred             CceEEEEEeccCCceEEEEEEEC-----CCCcEEEEEEEecC-hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEe
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDL-----HTGVDVCLKIIKND-KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH  487 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dk-----ktg~~VAVKIIk~s-k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~  487 (552)
                      ..+.+.++||+|+||+||+|+++     .+++.||||+++.. ....+.+.+|+++|++|+|      ||||++++++..
T Consensus        41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H------pnIV~l~g~~~~  114 (329)
T 4aoj_A           41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQH------QHIVRFFGVCTE  114 (329)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCC------TTBCCEEEEECS
T ss_pred             HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCC------CCCCcEEEEEEE
Confidence            46888999999999999999865     36889999999764 3445779999999999998      999999999999


Q ss_pred             CCEEEEEEecCCC-CHHHHHHhhccCC---------CCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          488 LEHLFIVCELLRA-NLYEFQKFNQESG---------GEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       488 ~~hLyIVmEll~G-sL~d~Lk~~~~~g---------~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      .+.+|||||||.+ +|.++|+......         ...+|++.++..|+.||+.||.|||+++|||+|||+
T Consensus       115 ~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLKp  186 (329)
T 4aoj_A          115 GRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLAT  186 (329)
T ss_dssp             SSSEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCG
T ss_pred             CCEEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccH
Confidence            9999999999987 9999998653211         113489999999999999999999999999999997

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=99.89  E-value=8.2e-23  Score=212.16  Aligned_cols=123  Identities=13%  Similarity=0.186  Sum_probs=109.9

Q ss_pred             ecCceEEEEEeccCCceEEEEEEEC---CCCcEEEEEEEecChhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeC
Q 008813          412 IAGRYYVTEYLGSAAFSKVFQAQDL---HTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL  488 (552)
Q Consensus       412 i~~RY~Ile~LGkG~FG~VykA~Dk---ktg~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~  488 (552)
                      +.++|++.+.||+|+||+||+|+++   .+++.||||++..... ..++.+|+++|+.+.+|     ||||+++++|...
T Consensus        19 l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~-~~~~~~E~~~l~~~~~h-----~nIv~l~~~~~~~   92 (361)
T 4f9c_A           19 LSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSH-PIRIAAELQCLTVAGGQ-----DNVMGVKYCFRKN   92 (361)
T ss_dssp             GGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTSC-HHHHHHHHHHHHHTCSB-----TTBCCCSEEEEET
T ss_pred             ccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccccC-HHHHHHHHHHHHHhcCC-----CCCceEEEEEEEC
Confidence            4578999999999999999999875   4678999999876432 35678999999999654     9999999999999


Q ss_pred             CEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          489 EHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       489 ~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      +++|||||||.+ +|.++++.         +++.+++.|++||+.||.|||++||||+|||+
T Consensus        93 ~~~~lvmE~~~g~~L~~~~~~---------l~~~~~~~~~~qll~al~ylH~~gIiHRDiKP  145 (361)
T 4f9c_A           93 DHVVIAMPYLEHESFLDILNS---------LSFQEVREYMLNLFKALKRIHQFGIVHRDVKP  145 (361)
T ss_dssp             TEEEEEEECCCCCCHHHHHTT---------CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSG
T ss_pred             CEEEEEEeCCCcccHHHHHcC---------CCHHHHHHHHHHHHHHHHHHHHCCeEeCcCCH
Confidence            999999999986 99998842         89999999999999999999999999999997

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=99.88  E-value=3.2e-22  Score=202.55  Aligned_cols=150  Identities=23%  Similarity=0.324  Sum_probs=128.1

Q ss_pred             CccCCCCCcceeeCceecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChhhHHHHHHHHHHHHHhcccC--CC
Q 008813          396 TGFEENKDLPIILNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKND--PA  473 (552)
Q Consensus       396 ~gfde~~~y~v~~gdvi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd--~~  473 (552)
                      ..+...+.+++.+++++.+||++++.||+|+||.||+|++..+++.||||+++......+.+.+|+++|+.+.+..  +.
T Consensus        19 ~~~~~~~~~~~~~g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~   98 (397)
T 1wak_A           19 NDYCKGGYHLVKIGDLFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDP   98 (397)
T ss_dssp             ---CC--CCSSCTTCEETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHSCTTCG
T ss_pred             ccCCCCCceEEehhhhcCCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecCCcchHHHHHHHHHHHHHhhcCCCCC
Confidence            4455667889999999999999999999999999999999999999999999877666788899999999998521  12


Q ss_pred             CCCCeeEeEeEEE----eCCEEEEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhC-CCeeeecc
Q 008813          474 DEHHILRLYDYFY----HLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLL-LVIYFILF  548 (552)
Q Consensus       474 d~pnIVrL~d~F~----~~~hLyIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~-gIIH~~L~  548 (552)
                      +++||++++++|.    ...++|||||+++++|.+++.......    +++..++.|+.||+.||.|||++ ||||+|||
T Consensus        99 ~~~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~----~~~~~~~~i~~qi~~aL~~lH~~~givHrDik  174 (397)
T 1wak_A           99 NREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSNYQG----LPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIK  174 (397)
T ss_dssp             GGGGBCCEEEEEEEEETTEEEEEEEECCCCCBHHHHHHHTTTSC----CCHHHHHHHHHHHHHHHHHHHHTTCEECCCCS
T ss_pred             CcceeeeeecceeecCCCCceEEEEEeccCccHHHHHHhcccCC----CCHHHHHHHHHHHHHHHHHHHHhCCEecCCCC
Confidence            3488999999998    456899999999989888887654332    89999999999999999999998 99999999


Q ss_pred             c
Q 008813          549 C  549 (552)
Q Consensus       549 ~  549 (552)
                      +
T Consensus       175 p  175 (397)
T 1wak_A          175 P  175 (397)
T ss_dssp             G
T ss_pred             H
Confidence            7

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=99.88  E-value=1.2e-22  Score=207.16  Aligned_cols=132  Identities=14%  Similarity=0.098  Sum_probs=111.2

Q ss_pred             ecCceEEEEEeccCCceEEEEEEEC-----CCCcEEEEEEEecC--hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeE
Q 008813          412 IAGRYYVTEYLGSAAFSKVFQAQDL-----HTGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDY  484 (552)
Q Consensus       412 i~~RY~Ile~LGkG~FG~VykA~Dk-----ktg~~VAVKIIk~s--k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~  484 (552)
                      ....++++++||+|+||+||+|...     .+++.||||+++..  ....+.+.+|+.+|++|+|      ||||+++++
T Consensus        24 ~~~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~H------pNIV~l~g~   97 (308)
T 4gt4_A           24 SLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQH------PNVVCLLGV   97 (308)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCC------TTBCCEEEE
T ss_pred             CHHHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCC------CCCCCcceE
Confidence            3456889999999999999999864     46789999999753  3345778999999999998      999999999


Q ss_pred             EEeCCEEEEEEecCCC-CHHHHHHhhccCC----------CCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          485 FYHLEHLFIVCELLRA-NLYEFQKFNQESG----------GEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       485 F~~~~hLyIVmEll~G-sL~d~Lk~~~~~g----------~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      +...+.+|||||||.+ +|.++|..+....          ....+++..+..|+.||+.||.|||+++|||+|||+
T Consensus        98 ~~~~~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLK~  173 (308)
T 4gt4_A           98 VTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLAT  173 (308)
T ss_dssp             ECSSSSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSG
T ss_pred             EEECCEEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCccc
Confidence            9999999999999987 9999997543110          012489999999999999999999999999999997

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=99.88  E-value=1e-21  Score=206.32  Aligned_cols=146  Identities=27%  Similarity=0.403  Sum_probs=133.9

Q ss_pred             CCCCcceeeCceecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChhhHHHHHHHHHHHHHhcccCCCCCCCee
Q 008813          400 ENKDLPIILNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHIL  479 (552)
Q Consensus       400 e~~~y~v~~gdvi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd~~d~pnIV  479 (552)
                      +...+....++.+..||++++.||+|+||.||+|.+..+++.||||+++........+.+|+++++.+++.+..+++||+
T Consensus        83 ~~~~~~~~~~~~~~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~iv  162 (429)
T 3kvw_A           83 DQGSYVQVPHDHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVI  162 (429)
T ss_dssp             TTSCBCCCTTCEETTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHTTCTTSCSCBC
T ss_pred             cCCCccccCCCcccCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCccchHHHHHHHHHHHHHHhhccccCCcCEE
Confidence            34566677788999999999999999999999999999999999999998777778889999999999987777889999


Q ss_pred             EeEeEEEeCCEEEEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          480 RLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       480 rL~d~F~~~~hLyIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ++++++...+++|||||++.++|.+++......+    +++..++.|+.||+.||.|||++||||+|||+
T Consensus       163 ~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~----~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp  228 (429)
T 3kvw_A          163 HMLENFTFRNHICMTFELLSMNLYELIKKNKFQG----FSLPLVRKFAHSILQCLDALHKNRIIHCDLKP  228 (429)
T ss_dssp             CEEEEEEETTEEEEEECCCCCBHHHHHHHTTTCC----CCHHHHHHHHHHHHHHHHHHHHHTEECSCCSG
T ss_pred             EEEeecccCCeEEEEEeccCCCHHHHHHhccCCC----CCHHHHHHHHHHHHHHHHHHHHCCeecCCCCH
Confidence            9999999999999999999999999999876443    89999999999999999999999999999997

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=99.88  E-value=7.2e-22  Score=199.36  Aligned_cols=143  Identities=18%  Similarity=0.300  Sum_probs=127.4

Q ss_pred             CCcceeeCceecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChhhHHHHHHHHHHHHHhcccCCCCCCCeeEe
Q 008813          402 KDLPIILNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRL  481 (552)
Q Consensus       402 ~~y~v~~gdvi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd~~d~pnIVrL  481 (552)
                      ..+.+..+.++.++|+++++||+|+||.||+|++..+++.||||+++..........+|+.+++.+.+ ...+++||+++
T Consensus        23 ~~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~-~~~~h~~iv~~  101 (360)
T 3llt_A           23 VHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADILKKIQN-DDINNNNIVKY  101 (360)
T ss_dssp             GSCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCHHHHHHHHHHHHHHHHTCC-CSTTGGGBCCE
T ss_pred             eeeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccchhhhhhhHHHHHHHHHhcc-cCCCCCCeecc
Confidence            34566778899999999999999999999999999999999999998766666778899999999983 12234999999


Q ss_pred             EeEEEeCCEEEEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          482 YDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       482 ~d~F~~~~hLyIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ++++...+++|||||+++++|.+++.......    +++..++.|+.||+.||.|||++||||+|||+
T Consensus       102 ~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~----~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp  165 (360)
T 3llt_A          102 HGKFMYYDHMCLIFEPLGPSLYEIITRNNYNG----FHIEDIKLYCIEILKALNYLRKMSLTHTDLKP  165 (360)
T ss_dssp             EEEEEETTEEEEEECCCCCBHHHHHHHTTTCC----CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSG
T ss_pred             cceeeECCeeEEEEcCCCCCHHHHHHhcCCCC----CCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCc
Confidence            99999999999999999779999999766433    89999999999999999999999999999997

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=99.87  E-value=1.4e-21  Score=192.89  Aligned_cols=143  Identities=27%  Similarity=0.376  Sum_probs=128.3

Q ss_pred             CcceeeCceecCceEEEEEeccCCceEEEEEEE-CCCCcEEEEEEEecChhhHHHHHHHHHHHHHhcccCCCCCCCeeEe
Q 008813          403 DLPIILNTVIAGRYYVTEYLGSAAFSKVFQAQD-LHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRL  481 (552)
Q Consensus       403 ~y~v~~gdvi~~RY~Ile~LGkG~FG~VykA~D-kktg~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd~~d~pnIVrL  481 (552)
                      .+++..++++.+||++++.||+|+||.||+|.+ ..+++.||||+++......+.+.+|+.+++.++|.....+++|+++
T Consensus         3 ~~~~~~g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~   82 (339)
T 1z57_A            3 HLICQSGDVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNSTFRCVQM   82 (339)
T ss_dssp             GGTCSTTCEETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHHCTTCTTCBCCE
T ss_pred             ceeeecCCCccCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCCchhHHHHHHHHHHHHhhhcCCCCceeeEee
Confidence            456678889999999999999999999999999 4578999999998776667888999999999998655666789999


Q ss_pred             EeEEEeCCEEEEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          482 YDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       482 ~d~F~~~~hLyIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ++++...+++||||||++++|.+++......    ++++..++.|+.||+.||.|||++||||+|||+
T Consensus        83 ~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp  146 (339)
T 1z57_A           83 LEWFEHHGHICIVFELLGLSTYDFIKENGFL----PFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKP  146 (339)
T ss_dssp             EEEEEETTEEEEEEECCCCBHHHHHHHTTTC----CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCG
T ss_pred             ecccccCCcEEEEEcCCCCCHHHHHHhcCCC----CCcHHHHHHHHHHHHHHHHHHHHCCCcCCCCCH
Confidence            9999999999999999988999999876532    389999999999999999999999999999997

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=99.87  E-value=2.5e-22  Score=205.19  Aligned_cols=124  Identities=19%  Similarity=0.249  Sum_probs=107.7

Q ss_pred             eecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC---hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEe
Q 008813          411 VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH  487 (552)
Q Consensus       411 vi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s---k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~  487 (552)
                      +..+++++.++||+|+||+||+|++..   .||||+++..   ....+.+.+|+.+|++|+|      ||||++++++. 
T Consensus        33 i~~~~l~l~~~iG~G~fG~Vy~~~~~~---~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~H------pNIV~l~g~~~-  102 (307)
T 3omv_A           33 IEASEVMLSTRIGSGSFGTVYKGKWHG---DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRH------VNILLFMGYMT-  102 (307)
T ss_dssp             CCTTSCCEEEECCCCSSSEEEEEESSS---EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCC------TTBCCEEEEEC-
T ss_pred             EcHHHeEEeeEEeeCCCcEEEEEEECC---cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCC------CCEeeEEEEEE-
Confidence            344678899999999999999998643   5999999753   3455788999999999998      99999999875 


Q ss_pred             CCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          488 LEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       488 ~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      .+.+|||||||.+ +|.++|.....     ++++.++..|+.||+.||.|||+++|||+|||+
T Consensus       103 ~~~~~iVmEy~~gGsL~~~l~~~~~-----~l~~~~~~~i~~qia~gL~yLH~~~IiHRDlKp  160 (307)
T 3omv_A          103 KDNLAIVTQWCEGSSLYKHLHVQET-----KFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKS  160 (307)
T ss_dssp             SSSCEEEEECCSSCBHHHHHHTSCC-----CCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCS
T ss_pred             CCeEEEEEEcCCCCCHHHHHhhcCC-----CCCHHHHHHHHHHHHHHHHHHHHCCccCCccCH
Confidence            5678999999987 99999986543     289999999999999999999999999999997

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=99.87  E-value=5.5e-22  Score=206.03  Aligned_cols=134  Identities=18%  Similarity=0.208  Sum_probs=113.1

Q ss_pred             eecCceEEEEEeccCCceEEEEEEECCC-----CcEEEEEEEecC--hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEe
Q 008813          411 VIAGRYYVTEYLGSAAFSKVFQAQDLHT-----GVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYD  483 (552)
Q Consensus       411 vi~~RY~Ile~LGkG~FG~VykA~Dkkt-----g~~VAVKIIk~s--k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d  483 (552)
                      +..++|++.+.||+|+||+||+|.+..+     ++.||||+++..  ....+.+.+|+++|++++||     ||||++++
T Consensus        61 i~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hh-----pnIV~l~g  135 (353)
T 4ase_A           61 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH-----LNVVNLLG  135 (353)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCC-----TTBCCEEE
T ss_pred             ecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCC-----CcEEEEEE
Confidence            4457899999999999999999997643     468999999764  23346789999999999987     99999999


Q ss_pred             EEEeC-CEEEEEEecCCC-CHHHHHHhhccCC----------CCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          484 YFYHL-EHLFIVCELLRA-NLYEFQKFNQESG----------GEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       484 ~F~~~-~hLyIVmEll~G-sL~d~Lk~~~~~g----------~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ++... +++|||||||.+ +|.++|+......          ...++++..+..|+.||+.||.|||+++|||+|||+
T Consensus       136 ~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~iiHRDLK~  213 (353)
T 4ase_A          136 ACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAA  213 (353)
T ss_dssp             EECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSG
T ss_pred             EEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCCeecCccCc
Confidence            98764 679999999987 9999998654210          012389999999999999999999999999999997

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=99.87  E-value=3.4e-21  Score=191.67  Aligned_cols=147  Identities=25%  Similarity=0.310  Sum_probs=130.7

Q ss_pred             CCCCcceeeCceecCceEEEEEeccCCceEEEEEEECCCC-cEEEEEEEecChhhHHHHHHHHHHHHHhcccCCCCCCCe
Q 008813          400 ENKDLPIILNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTG-VDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHI  478 (552)
Q Consensus       400 e~~~y~v~~gdvi~~RY~Ile~LGkG~FG~VykA~Dkktg-~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd~~d~pnI  478 (552)
                      ..+.+.+.+++.+.+||++++.||+|+||.||+|.+..++ +.||||+++......+.+.+|+.+++.++|.......+|
T Consensus         5 ~~~~~~~~~g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~   84 (355)
T 2eu9_A            5 KEGHLVCRIGDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKFLC   84 (355)
T ss_dssp             TTSCBCCCTTCEETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHHCTTSCSCB
T ss_pred             cCCCcccccCceecccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccccchhHHHHHHHHHHHHhhcCCCCceeE
Confidence            4567888899999999999999999999999999998776 789999998776667788999999999998555555669


Q ss_pred             eEeEeEEEeCCEEEEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          479 LRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       479 VrL~d~F~~~~hLyIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      +.+++++...+++|||||+++++|.+++.......    +++..++.|+.||+.||.|||++||||+|||+-
T Consensus        85 ~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~----~~~~~~~~i~~qi~~~L~~lH~~~ivH~Dlkp~  152 (355)
T 2eu9_A           85 VLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQP----YPLPHVRHMAYQLCHALRFLHENQLTHTDLKPE  152 (355)
T ss_dssp             CCEEEEEEETTEEEEEEECCCCBHHHHHHHTTTCC----CCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGG
T ss_pred             EEeeeeeeeCCeEEEEEeccCCChHHHHHhccCCC----CCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHH
Confidence            99999999999999999999889999888765322    899999999999999999999999999999973

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=99.86  E-value=9.5e-22  Score=198.80  Aligned_cols=122  Identities=16%  Similarity=0.157  Sum_probs=103.5

Q ss_pred             cCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCC---
Q 008813          413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE---  489 (552)
Q Consensus       413 ~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~---  489 (552)
                      ..+|.+.++||+|+||+||+|++  +|+.||||+++..........+|+.++..|+|      ||||++++++...+   
T Consensus         2 ar~i~L~~~iG~G~fG~Vy~~~~--~g~~VAvK~l~~~~~~~~~~e~Ei~~~~~l~H------pNIv~l~g~~~~~~~~~   73 (303)
T 3hmm_A            2 ARTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSREERSWFREAEIYQTVMLRH------ENILGFIAADNKDNGTW   73 (303)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEE--TTEEEEEEEECGGGHHHHHHHHHHHTSTTCCC------TTBCCEEEEEEEECSSS
T ss_pred             CcEEEEEEEEeeCCCeEEEEEEE--CCEEEEEEEECccchhhHHHHHHHHHHhcCCC------CCCCcEEEEEEecCCCc
Confidence            46799999999999999999987  58899999997654322233455666667887      99999999998653   


Q ss_pred             -EEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhC--------CCeeeeccc
Q 008813          490 -HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLL--------LVIYFILFC  549 (552)
Q Consensus       490 -hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~--------gIIH~~L~~  549 (552)
                       ++|||||||.+ +|.++|+...       +++..+..|+.|++.||.|||++        +|||+|||+
T Consensus        74 ~~~~lV~Ey~~~gsL~~~l~~~~-------l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp  136 (303)
T 3hmm_A           74 TQLWLVSDYHEHGSLFDYLNRYT-------VTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKS  136 (303)
T ss_dssp             EEEEEEEECCTTCBHHHHHHHCC-------BCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCG
T ss_pred             eEEEEEecCCCCCcHHHHHHhCC-------CCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCc
Confidence             68999999986 9999998643       89999999999999999999987        999999997

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=99.86  E-value=1e-21  Score=220.18  Aligned_cols=128  Identities=18%  Similarity=0.232  Sum_probs=108.9

Q ss_pred             cCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecCh----hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeC
Q 008813          413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL  488 (552)
Q Consensus       413 ~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk----~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~  488 (552)
                      .++|++++.||+|+||+||+|+++.+++.||||++++..    .....+.+|..++..+++   .+|||||+++++|.+.
T Consensus       188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~---~~HP~IV~l~~~f~~~  264 (689)
T 3v5w_A          188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST---GDCPFIVCMSYAFHTP  264 (689)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSS---SCCTTBCCEEEEEECS
T ss_pred             hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhh---CCCCCEeEEEEEEEEC
Confidence            457999999999999999999999999999999997542    122345556555544432   1229999999999999


Q ss_pred             CEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          489 EHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       489 ~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      +++|||||||.| +|.++|+..+.      |++..++.|+.||+.||.|||++||||+|||+
T Consensus       265 ~~lylVmEy~~GGdL~~~l~~~~~------l~E~~a~~y~~qIl~aL~yLH~~gIiHRDLKP  320 (689)
T 3v5w_A          265 DKLSFILDLMNGGDLHYHLSQHGV------FSEADMRFYAAEIILGLEHMHNRFVVYRDLKP  320 (689)
T ss_dssp             SEEEEEECCCCSCBHHHHHHHHCC------CCHHHHHHHHHHHHHHHHHHHTTTEECCCCSG
T ss_pred             CEEEEEEecCCCCcHHHHHHhcCC------CCHHHHHHHHHHHHHHHHHHHHCCccccCCch
Confidence            999999999987 99999987653      99999999999999999999999999999997

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.86  E-value=3.9e-21  Score=190.11  Aligned_cols=132  Identities=15%  Similarity=0.212  Sum_probs=120.3

Q ss_pred             eeCceecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC----hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeE
Q 008813          407 ILNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND----KDFFDQSLDEIKLLKLVNKNDPADEHHILRLY  482 (552)
Q Consensus       407 ~~gdvi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s----k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~  482 (552)
                      .+++++.+||++++.||+|+||.||+|++..+++.||||++...    ....+.+.+|+.+++.++|      |||++++
T Consensus         4 ~~g~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h------p~iv~~~   77 (294)
T 4eqm_A            4 MIGKIINERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSH------QNIVSMI   77 (294)
T ss_dssp             CCSSCEETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCB------TTBCCEE
T ss_pred             chhhHhhccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCC------CCCceEE
Confidence            35778899999999999999999999999999999999998643    3345678899999999998      9999999


Q ss_pred             eEEEeCCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          483 DYFYHLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       483 d~F~~~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      +++...+.+||||||+.+ +|.+++.....      +++..++.++.||+.||.|||++||||+|||+-
T Consensus        78 ~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~------~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~  140 (294)
T 4eqm_A           78 DVDEEDDCYYLVMEYIEGPTLSEYIESHGP------LSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQ  140 (294)
T ss_dssp             EEEECSSEEEEEEECCCSCBHHHHHHHHCS------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGG
T ss_pred             EeeeeCCeEEEEEeCCCCCCHHHHHHhcCC------CCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHH
Confidence            999999999999999987 99999987653      899999999999999999999999999999973

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.86  E-value=2.6e-21  Score=192.21  Aligned_cols=131  Identities=18%  Similarity=0.158  Sum_probs=116.5

Q ss_pred             ceeeCc-eecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC----hhhHHHHHHHHHHHHHhcccCCCCCCCee
Q 008813          405 PIILNT-VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND----KDFFDQSLDEIKLLKLVNKNDPADEHHIL  479 (552)
Q Consensus       405 ~v~~gd-vi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s----k~~~~~~lrEIkILk~L~hhd~~d~pnIV  479 (552)
                      .+..|+ ++.+||++.+.||+|+||.||+|++..+++.||||+++..    ......+.+|+.+++.++|      +||+
T Consensus        21 ~~~~g~~~~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h------p~iv   94 (286)
T 3uqc_A           21 QLVPGARIANGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDK------PGVA   94 (286)
T ss_dssp             CCCTTCEETTTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCC------TTBC
T ss_pred             cCCCCCEEecCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCC------CCcc
Confidence            455667 7789999999999999999999999999999999999864    3344778899999999998      9999


Q ss_pred             EeEeEEEeCCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          480 RLYDYFYHLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       480 rL~d~F~~~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ++++++...+++||||||+.+ +|.++++..        ....++..|+.||+.||.|||++||||+|||+
T Consensus        95 ~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~--------~~~~~~~~i~~ql~~aL~~lH~~givH~Dikp  157 (286)
T 3uqc_A           95 RVLDVVHTRAGGLVVAEWIRGGSLQEVADTS--------PSPVGAIRAMQSLAAAADAAHRAGVALSIDHP  157 (286)
T ss_dssp             CEEEEEEETTEEEEEEECCCEEEHHHHHTTC--------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSG
T ss_pred             eeeEEEEECCcEEEEEEecCCCCHHHHHhcC--------CChHHHHHHHHHHHHHHHHHHHCCCccCCCCc
Confidence            999999999999999999987 999998532        35567888999999999999999999999997

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.85  E-value=6.8e-21  Score=186.83  Aligned_cols=125  Identities=24%  Similarity=0.212  Sum_probs=113.9

Q ss_pred             CceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC---hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCE
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH  490 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s---k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~h  490 (552)
                      ++|++++.||+|+||.||+|++..+++.||||+++..   ......+.+|+.+++.++|      |||+++++++...++
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h------~~iv~~~~~~~~~~~   75 (292)
T 3o0g_A            2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKH------KNIVRLHDVLHSDKK   75 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCC------TTBCCEEEEEEETTE
T ss_pred             CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCC------CCEeeEEeEEEeCCE
Confidence            5899999999999999999999999999999999754   3344678899999999998      999999999999999


Q ss_pred             EEEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          491 LFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       491 LyIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      +||||||+.++|.+++.....     .+++..++.|+.||+.||.|||++||||+|||+
T Consensus        76 ~~lv~e~~~~~l~~~~~~~~~-----~l~~~~~~~~~~ql~~~l~~lH~~~ivH~dikp  129 (292)
T 3o0g_A           76 LTLVFEFCDQDLKKYFDSCNG-----DLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKP  129 (292)
T ss_dssp             EEEEEECCSEEHHHHHHHTTT-----CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSG
T ss_pred             EEEEEecCCCCHHHHHHhCCC-----CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCH
Confidence            999999999998888776443     289999999999999999999999999999997

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=99.85  E-value=8.5e-21  Score=192.60  Aligned_cols=127  Identities=17%  Similarity=0.311  Sum_probs=116.1

Q ss_pred             eecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC---hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEe
Q 008813          411 VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH  487 (552)
Q Consensus       411 vi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s---k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~  487 (552)
                      ...++|++++.||+|+||.||+|.+..+++.||||++...   ....+.+.+|+++|+.++|      |||+++++++..
T Consensus        12 ~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h------pnIv~l~~~~~~   85 (328)
T 3fe3_A           12 PHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNH------PNIVKLFEVIET   85 (328)
T ss_dssp             CEETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCC------TTBCCEEEEEEC
T ss_pred             CccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCC------CCEeeEEEEEEE
Confidence            3457899999999999999999999999999999999764   3345678899999999998      999999999999


Q ss_pred             CCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          488 LEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       488 ~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      .+.+||||||+.+ +|.+++...+.      +++..++.++.||+.||.|||++||||+|||+
T Consensus        86 ~~~~~lv~e~~~~~~L~~~l~~~~~------l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp  142 (328)
T 3fe3_A           86 EKTLYLIMEYASGGEVFDYLVAHGR------MKEKEARSKFRQIVSAVQYCHQKRIVHRDLKA  142 (328)
T ss_dssp             SSEEEEEECCCTTCBHHHHHHHHCC------CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCG
T ss_pred             CCEEEEEEECCCCCcHHHHHHHcCC------CCHHHHHHHHHHHHHHHHHHHHCCEeccCCCH
Confidence            9999999999976 99999987653      89999999999999999999999999999997

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.85  E-value=7e-21  Score=195.12  Aligned_cols=126  Identities=20%  Similarity=0.152  Sum_probs=117.0

Q ss_pred             ecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEE
Q 008813          412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL  491 (552)
Q Consensus       412 i~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hL  491 (552)
                      ..+||++++.||+|+||.||+|++..+++.||||++.......+.+.+|+.+++.++|      |||+++++++...+++
T Consensus        18 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h------pniv~~~~~~~~~~~~   91 (361)
T 3uc3_A           18 DSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLRH------PNIVRFKEVILTPTHL   91 (361)
T ss_dssp             CTTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTSCHHHHHHHHHHHHCCC------TTBCCEEEEEECSSEE
T ss_pred             CCCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCccccHHHHHHHHHHHhCCC------CCCCcEEEEEeeCCEE
Confidence            3479999999999999999999999999999999998766556778899999999998      9999999999999999


Q ss_pred             EEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          492 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       492 yIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ||||||+.+ +|.+++...+.      +++..++.|+.||+.||.|||++||||+|||+
T Consensus        92 ~lv~e~~~~~~L~~~l~~~~~------~~~~~~~~i~~ql~~~L~~LH~~~ivH~Dlkp  144 (361)
T 3uc3_A           92 AIIMEYASGGELYERICNAGR------FSEDEARFFFQQLLSGVSYCHSMQICHRDLKL  144 (361)
T ss_dssp             EEEEECCCSCBHHHHHHHHSS------CCHHHHHHHHHHHHHHHHHHHHTTCCSCCCCG
T ss_pred             EEEEEeCCCCCHHHHHHhcCC------CCHHHHHHHHHHHHHHHHHHHHCCcccCCCCH
Confidence            999999976 99999987653      89999999999999999999999999999997

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.85  E-value=9.1e-21  Score=190.99  Aligned_cols=128  Identities=16%  Similarity=0.193  Sum_probs=117.1

Q ss_pred             ecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEE
Q 008813          412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL  491 (552)
Q Consensus       412 i~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hL  491 (552)
                      +.++|++.+.||+|+||.||+|.+..+++.||+|+++........+.+|+.+|+.++|      |||+++++++...+++
T Consensus         3 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~h------pnIv~~~~~~~~~~~~   76 (321)
T 1tki_A            3 LYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARH------RNILHLHESFESMEEL   76 (321)
T ss_dssp             CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTHHHHHHHHHHHHHHHSCC------TTBCCEEEEEEETTEE
T ss_pred             hhhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCcccHHHHHHHHHHHHhCCC------CCCCeEeEEEecCCEE
Confidence            4579999999999999999999999999999999998765556678899999999998      9999999999999999


Q ss_pred             EEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          492 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       492 yIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      ||||||+.+ +|.+++.....     ++++..++.++.||+.||.|||++||||+|||+-
T Consensus        77 ~lv~e~~~g~~L~~~l~~~~~-----~~~~~~~~~i~~qi~~al~~lH~~givH~Dlkp~  131 (321)
T 1tki_A           77 VMIFEFISGLDIFERINTSAF-----ELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPE  131 (321)
T ss_dssp             EEEECCCCCCBHHHHHTSSSC-----CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGG
T ss_pred             EEEEEeCCCCCHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHH
Confidence            999999987 99999876432     2899999999999999999999999999999973

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.85  E-value=1.3e-20  Score=187.73  Aligned_cols=142  Identities=13%  Similarity=0.052  Sum_probs=122.5

Q ss_pred             cCCCCCcceeeCceecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC---hhhHHHHHHHHHHHHHhcccCCCC
Q 008813          398 FEENKDLPIILNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPAD  474 (552)
Q Consensus       398 fde~~~y~v~~gdvi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s---k~~~~~~lrEIkILk~L~hhd~~d  474 (552)
                      +.....++...++++.++|+++++||+|+||+||+|++..+++.||||++...   .........|+..+..+.+|    
T Consensus        41 ~~~~~~~p~~~~~~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h----  116 (311)
T 3p1a_A           41 LQSPGYDPSRPESFFQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQH----  116 (311)
T ss_dssp             CCCTTCCTTSSSCHHHHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCC----
T ss_pred             cCCCCCCCCCccchhhhheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCC----
Confidence            44456677888888999999999999999999999999999999999998653   22334556777777776333    


Q ss_pred             CCCeeEeEeEEEeCCEEEEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          475 EHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       475 ~pnIVrL~d~F~~~~hLyIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                       +||+++++++...+++||||||++++|.+++.....     ++++..++.|+.||+.||.|||+++|||+|||+
T Consensus       117 -~~iv~l~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~-----~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp  185 (311)
T 3p1a_A          117 -PCCVRLEQAWEEGGILYLQTELCGPSLQQHCEAWGA-----SLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKP  185 (311)
T ss_dssp             -TTBCCEEEEEEETTEEEEEEECCCCBHHHHHHHHCS-----CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSG
T ss_pred             -CcEEEEEEEEEeCCEEEEEEeccCCCHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCH
Confidence             999999999999999999999999999999887653     289999999999999999999999999999997

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=99.85  E-value=1.2e-20  Score=193.49  Aligned_cols=145  Identities=30%  Similarity=0.375  Sum_probs=129.7

Q ss_pred             CCCcceeeCceecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChhhHHHHHHHHHHHHHhcccCCCCCCCeeE
Q 008813          401 NKDLPIILNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILR  480 (552)
Q Consensus       401 ~~~y~v~~gdvi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd~~d~pnIVr  480 (552)
                      ..++++..++.+.++|++.+.||+|+||.||+|.+..+++.||||+++........+.+|+++++.++++....+++|++
T Consensus        41 ~~~~~~~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~  120 (382)
T 2vx3_A           41 NYDYIVKNGEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVH  120 (382)
T ss_dssp             TSCBCCCTTCEETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHCSSGGGGGBCC
T ss_pred             CCcEEeecCCEeeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccHHHHHHHHHHHHHHHHHHhcccccceeEEE
Confidence            34578888899999999999999999999999999999999999999987767788899999999998764444456999


Q ss_pred             eEeEEEeCCEEEEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHH--hCCCeeeeccc
Q 008813          481 LYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIF--LLLVIYFILFC  549 (552)
Q Consensus       481 L~d~F~~~~hLyIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLH--s~gIIH~~L~~  549 (552)
                      +++++...+++|||||+++++|.+++......+    +++..++.|+.||+.||.|||  .+||||+|||+
T Consensus       121 ~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~----~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDlkp  187 (382)
T 2vx3_A          121 LKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRG----VSLNLTRKFAQQMCTALLFLATPELSIIHCDLKP  187 (382)
T ss_dssp             EEEEEEETTEEEEEEECCCCBHHHHHHHTTTSC----CCHHHHHHHHHHHHHHHHHHTSTTTCEECCCCSG
T ss_pred             eeeeeccCCceEEEEecCCCCHHHHHhhcCcCC----CCHHHHHHHHHHHHHHHHHhccCCCCEEcCCCCc
Confidence            999999999999999999999999999765433    899999999999999999999  57999999997

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=99.85  E-value=1.2e-20  Score=186.44  Aligned_cols=132  Identities=20%  Similarity=0.269  Sum_probs=110.9

Q ss_pred             eCceecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecCh------hhHHHHHHHHHHHHHhc---ccCCCCCCCe
Q 008813          408 LNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK------DFFDQSLDEIKLLKLVN---KNDPADEHHI  478 (552)
Q Consensus       408 ~gdvi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk------~~~~~~lrEIkILk~L~---hhd~~d~pnI  478 (552)
                      +++++.+||++++.||+|+||.||+|++..+++.||||+++...      .......+|+.+++.++   |      |||
T Consensus         3 ~g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h------~ni   76 (308)
T 3g33_A            3 LGSMATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEH------PNV   76 (308)
T ss_dssp             -------CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCC------TTB
T ss_pred             CCcccccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCC------CCe
Confidence            45678899999999999999999999999999999999997421      12346778888888877   5      999


Q ss_pred             eEeEeEEEeCC-----EEEEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          479 LRLYDYFYHLE-----HLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       479 VrL~d~F~~~~-----hLyIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      +++++++....     ++++|||++.++|.+++.......    +++..++.|+.||+.||.|||++||||+|||+
T Consensus        77 v~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~----~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp  148 (308)
T 3g33_A           77 VRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPG----LPAETIKDLMRQFLRGLDFLHANCIVHRDLKP  148 (308)
T ss_dssp             CCEEEEEEECCSSSEEEEEEEEECCCCBHHHHHHTCCTTC----SCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCT
T ss_pred             EEeeeeeeccCCCCceeEEEEehhhhcCHHHHHhhccCCC----CCHHHHHHHHHHHHHHHHHHHHCCcccCCCCH
Confidence            99999998765     699999999999999998765433    89999999999999999999999999999997

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.84  E-value=1.1e-20  Score=192.25  Aligned_cols=131  Identities=18%  Similarity=0.178  Sum_probs=115.6

Q ss_pred             eecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChh------hHHHHHHHHHHHHHhcccCCCCCCCeeEeEeE
Q 008813          411 VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD------FFDQSLDEIKLLKLVNKNDPADEHHILRLYDY  484 (552)
Q Consensus       411 vi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~------~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~  484 (552)
                      .+.++|++.+.||+|+||.||+|.++.+++.||||++.....      ..+.+.+|+.+++.++|      |||++++++
T Consensus        21 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h------pnIv~~~~~   94 (351)
T 3c0i_A           21 LFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH------PHIVELLET   94 (351)
T ss_dssp             CHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCC------TTBCCEEEE
T ss_pred             ccccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCC------CCCCcEEEE
Confidence            456789999999999999999999999999999999975321      24678899999999998      999999999


Q ss_pred             EEeCCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          485 FYHLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       485 F~~~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      +...+++|||||||.+ +|.+++......+  ..+++..++.|+.||+.||.|||++||||+|||+
T Consensus        95 ~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~--~~~~~~~~~~i~~qi~~al~~lH~~~ivHrDlkp  158 (351)
T 3c0i_A           95 YSSDGMLYMVFEFMDGADLCFEIVKRADAG--FVYSEAVASHYMRQILEALRYCHDNNIIHRDVKP  158 (351)
T ss_dssp             EEETTEEEEEEECCSSCBHHHHHHHHHHTT--CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSG
T ss_pred             EEeCCEEEEEEeCCCCCCHHHHHHHhcccC--CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCh
Confidence            9999999999999986 9998887554322  2389999999999999999999999999999997

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.84  E-value=1.9e-20  Score=191.93  Aligned_cols=127  Identities=17%  Similarity=0.143  Sum_probs=115.8

Q ss_pred             cCceEEEEEeccC--CceEEEEEEECCCCcEEEEEEEecC---hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEe
Q 008813          413 AGRYYVTEYLGSA--AFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH  487 (552)
Q Consensus       413 ~~RY~Ile~LGkG--~FG~VykA~Dkktg~~VAVKIIk~s---k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~  487 (552)
                      .++|++++.||+|  +||.||+|++..+++.||||+++..   ....+.+.+|+.+|+.++|      ||||+++++|..
T Consensus        24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h------~niv~~~~~~~~   97 (389)
T 3gni_B           24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNH------PNIVPYRATFIA   97 (389)
T ss_dssp             GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCC------TTBCCEEEEEEE
T ss_pred             CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCC------CCCCcEeEEEEE
Confidence            3689999999999  9999999999999999999999864   3345678899999999998      999999999999


Q ss_pred             CCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          488 LEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       488 ~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      .+++|||||||.+ +|.+++.......    +++..++.|+.||+.||.|||++||||+|||+
T Consensus        98 ~~~~~lv~e~~~~~~L~~~l~~~~~~~----~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp  156 (389)
T 3gni_B           98 DNELWVVTSFMAYGSAKDLICTHFMDG----MNELAIAYILQGVLKALDYIHHMGYVHRSVKA  156 (389)
T ss_dssp             TTEEEEEEECCTTCBHHHHHHHTCTTC----CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSG
T ss_pred             CCEEEEEEEccCCCCHHHHHhhhcccC----CCHHHHHHHHHHHHHHHHHHHhCCeecCCCCH
Confidence            9999999999986 9999998764333    89999999999999999999999999999996

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=99.84  E-value=1.6e-20  Score=192.91  Aligned_cols=128  Identities=23%  Similarity=0.333  Sum_probs=113.7

Q ss_pred             eecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC----hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEE
Q 008813          411 VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND----KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFY  486 (552)
Q Consensus       411 vi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s----k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~  486 (552)
                      +..++|++++.||+|+||+||+|+++.+++.||||++++.    ........+|+.+|+.+.+|     |||++++++|.
T Consensus        20 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~h-----p~Iv~l~~~~~   94 (353)
T 3txo_A           20 LGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNH-----PFLTQLFCCFQ   94 (353)
T ss_dssp             ---CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTC-----TTBCCEEEEEE
T ss_pred             CchhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCC-----CceeeEEEEEE
Confidence            3347899999999999999999999999999999999864    22346688999999998543     99999999999


Q ss_pred             eCCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          487 HLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       487 ~~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ..+++||||||+.+ +|..+++..+.      +++..++.|+.||+.||.|||++||||+|||+
T Consensus        95 ~~~~~~lv~E~~~gg~L~~~l~~~~~------~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp  152 (353)
T 3txo_A           95 TPDRLFFVMEFVNGGDLMFHIQKSRR------FDEARARFYAAEIISALMFLHDKGIIYRDLKL  152 (353)
T ss_dssp             CSSEEEEEEECCCSCBHHHHHHHHSS------CCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCG
T ss_pred             eCCEEEEEEeCCCCCcHHHHHHHcCC------CCHHHHHHHHHHHHHHHHHHHHCCCcccCCCH
Confidence            99999999999987 99999987653      99999999999999999999999999999997

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=99.84  E-value=1.5e-20  Score=192.05  Aligned_cols=125  Identities=20%  Similarity=0.259  Sum_probs=114.4

Q ss_pred             cCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC----hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeC
Q 008813          413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND----KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL  488 (552)
Q Consensus       413 ~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s----k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~  488 (552)
                      .++|++++.||+|+||+||+|+++.+++.||||++++.    ......+.+|+.+|+.++|      |||++++++|...
T Consensus         4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~h------p~iv~l~~~~~~~   77 (337)
T 1o6l_A            4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH------PFLTALKYAFQTH   77 (337)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCC------TTBCCEEEEEECS
T ss_pred             hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCC------CcCcceEEEEEeC
Confidence            46899999999999999999999999999999999864    2234678899999999998      9999999999999


Q ss_pred             CEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          489 EHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       489 ~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      +++||||||+.+ +|..++...+.      +++..++.|+.||+.||.|||++||||+|||+
T Consensus        78 ~~~~lv~E~~~gg~L~~~l~~~~~------~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp  133 (337)
T 1o6l_A           78 DRLCFVMEYANGGELFFHLSRERV------FTEERARFYGAEIVSALEYLHSRDVVYRDIKL  133 (337)
T ss_dssp             SEEEEEEECCTTCBHHHHHHHHSC------CCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCG
T ss_pred             CEEEEEEeCCCCCcHHHHHHhcCC------CCHHHHHHHHHHHHHHHHHHHHCCeecCcCCH
Confidence            999999999987 99999987653      89999999999999999999999999999997

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=99.84  E-value=1.2e-20  Score=188.34  Aligned_cols=129  Identities=22%  Similarity=0.227  Sum_probs=114.4

Q ss_pred             CceecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC---hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEE
Q 008813          409 NTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYF  485 (552)
Q Consensus       409 gdvi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s---k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F  485 (552)
                      .+.+.++|++++.||+|+||.||+|++. +++.||||+++..   ......+.+|+++|+.++|      |||+++++++
T Consensus        16 ~q~l~~~y~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h------p~iv~~~~~~   88 (311)
T 3niz_A           16 FQGLMEKYQKLEKVGEGTYGVVYKAKDS-QGRIVALKRIRLDAEDEGIPSTAIREISLLKELHH------PNIVSLIDVI   88 (311)
T ss_dssp             EECSSCEEEEEEEEEECSSCEEEEEEET-TSCEEEEEEEC------CHHHHHHHHHHHHHHCCC------TTBCCEEEEE
T ss_pred             ecchHhhhHhhhhccCCCCeEEEEEEEC-CCCEEEEEEEecccccchhhHHHHHHHHHHHHcCC------CCEeeeeeEE
Confidence            4567789999999999999999999985 5899999999754   2234678899999999998      9999999999


Q ss_pred             EeCCEEEEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          486 YHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       486 ~~~~hLyIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ...+++||||||+.++|.+++.....     .+++..++.|+.||+.||.|||++||||+|||+
T Consensus        89 ~~~~~~~lv~e~~~~~l~~~~~~~~~-----~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp  147 (311)
T 3niz_A           89 HSERCLTLVFEFMEKDLKKVLDENKT-----GLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKP  147 (311)
T ss_dssp             CCSSCEEEEEECCSEEHHHHHHTCTT-----CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCG
T ss_pred             ccCCEEEEEEcCCCCCHHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCch
Confidence            99999999999999999999886543     289999999999999999999999999999997

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.84  E-value=1.8e-20  Score=199.87  Aligned_cols=135  Identities=19%  Similarity=0.294  Sum_probs=118.1

Q ss_pred             CcceeeCceecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecCh--------------hhHHHHHHHHHHHHHhc
Q 008813          403 DLPIILNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK--------------DFFDQSLDEIKLLKLVN  468 (552)
Q Consensus       403 ~y~v~~gdvi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk--------------~~~~~~lrEIkILk~L~  468 (552)
                      .+.......+.++|+++++||+|+||.||+|.++.+++.||||+++...              ...+.+.+|+.+|+.|+
T Consensus        25 ~~~~~~~~~i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~  104 (504)
T 3q5i_A           25 MYVRKKEGKIGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLD  104 (504)
T ss_dssp             GGCCEECSCGGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCC
T ss_pred             heeeccCCCcccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCC
Confidence            3444455567889999999999999999999999999999999997642              23467889999999999


Q ss_pred             ccCCCCCCCeeEeEeEEEeCCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeec
Q 008813          469 KNDPADEHHILRLYDYFYHLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFIL  547 (552)
Q Consensus       469 hhd~~d~pnIVrL~d~F~~~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L  547 (552)
                      |      ||||++++++....++|||||||.+ +|.+++.....      +++..++.|+.||+.||.|||++||||+||
T Consensus       105 h------pniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~------~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dl  172 (504)
T 3q5i_A          105 H------PNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHK------FDECDAANIMKQILSGICYLHKHNIVHRDI  172 (504)
T ss_dssp             C------TTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSC------CCHHHHHHHHHHHHHHHHHHHHTTEECSCC
T ss_pred             C------CCCCeEEEEEEcCCEEEEEEecCCCCcHHHHHHHcCC------CCHHHHHHHHHHHHHHHHHHHHCCeEeCCC
Confidence            8      9999999999999999999999987 99999987643      899999999999999999999999999999


Q ss_pred             cc
Q 008813          548 FC  549 (552)
Q Consensus       548 ~~  549 (552)
                      |+
T Consensus       173 kp  174 (504)
T 3q5i_A          173 KP  174 (504)
T ss_dssp             SG
T ss_pred             cH
Confidence            97

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.84  E-value=2e-20  Score=186.08  Aligned_cols=131  Identities=15%  Similarity=0.176  Sum_probs=115.9

Q ss_pred             ceecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecCh--hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEe
Q 008813          410 TVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH  487 (552)
Q Consensus       410 dvi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk--~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~  487 (552)
                      ..+.+||++.+.||+|+||.||+|++..+++.||||+++...  ...+.+.+|+++|+.++|      |||+++++++..
T Consensus         5 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h------~~iv~~~~~~~~   78 (319)
T 4euu_A            5 STSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNH------KNIVKLFAIEEE   78 (319)
T ss_dssp             ECSSEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCC------TTBCCEEEEEEC
T ss_pred             cCCCCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCC------CCcceEEEEeec
Confidence            456689999999999999999999999999999999998642  234667899999999998      999999999987


Q ss_pred             CC--EEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          488 LE--HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       488 ~~--hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ..  ++||||||+.+ +|.++++......   .+++..++.|+.||+.||.|||++||||+|||+
T Consensus        79 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~---~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp  140 (319)
T 4euu_A           79 TTTRHKVLIMEFCPCGSLYTVLEEPSNAY---GLPESEFLIVLRDVVGGMNHLRENGIVHRNIKP  140 (319)
T ss_dssp             TTTCCEEEEEECCTTCBHHHHHHSGGGTT---CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSG
T ss_pred             CCCceEEEEEeCCCCCCHHHHHHHhcccc---CCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCH
Confidence            65  89999999976 9999998765322   289999999999999999999999999999997

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.84  E-value=9.7e-21  Score=190.17  Aligned_cols=128  Identities=19%  Similarity=0.239  Sum_probs=113.4

Q ss_pred             ceecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecCh---hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEE
Q 008813          410 TVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFY  486 (552)
Q Consensus       410 dvi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk---~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~  486 (552)
                      ....+||++++.||+|+||.||+|++..+++.||||+++...   .....+.+|+.+|+.++|      |||+++++++.
T Consensus        30 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h------~~iv~~~~~~~  103 (329)
T 3gbz_A           30 ATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQH------RNIIELKSVIH  103 (329)
T ss_dssp             --CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCC------TTBCCEEEEEE
T ss_pred             ccchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCC------CCcceEEEEEe
Confidence            345679999999999999999999999999999999997542   234567799999999998      99999999999


Q ss_pred             eCCEEEEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          487 HLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       487 ~~~hLyIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ..+++||||||+.++|.+++.....      +++..++.|+.||+.||.|||++||||+|||+
T Consensus       104 ~~~~~~lv~e~~~~~L~~~~~~~~~------~~~~~~~~i~~ql~~~l~~LH~~~ivH~Dlkp  160 (329)
T 3gbz_A          104 HNHRLHLIFEYAENDLKKYMDKNPD------VSMRVIKSFLYQLINGVNFCHSRRCLHRDLKP  160 (329)
T ss_dssp             ETTEEEEEEECCSEEHHHHHHHCTT------CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCG
T ss_pred             cCCEEEEEEecCCCCHHHHHhhcCC------CCHHHHHHHHHHHHHHHHHHHhCCEECCCCCH
Confidence            9999999999999999999987653      89999999999999999999999999999997

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=99.84  E-value=1.2e-20  Score=193.00  Aligned_cols=128  Identities=23%  Similarity=0.281  Sum_probs=116.2

Q ss_pred             ceecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecCh----hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEE
Q 008813          410 TVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYF  485 (552)
Q Consensus       410 dvi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk----~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F  485 (552)
                      ....++|.+++.||+|+||.||+|.+..+++.||||++....    .....+.+|+.+|+.++|      |||+++++++
T Consensus         5 ~~~i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~h------pnIv~l~~~~   78 (336)
T 3h4j_B            5 KRHIGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRH------PHIIKLYDVI   78 (336)
T ss_dssp             CSEETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCC------TTBCCEEEEE
T ss_pred             ccccCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCC------CCCCeEEEEE
Confidence            345679999999999999999999999999999999997531    223578899999999998      9999999999


Q ss_pred             EeCCEEEEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          486 YHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       486 ~~~~hLyIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ...+.+||||||++++|.+++.....      +++..++.|+.||+.||.|||++||||+|||+
T Consensus        79 ~~~~~~~lv~E~~~g~l~~~l~~~~~------l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp  136 (336)
T 3h4j_B           79 TTPTDIVMVIEYAGGELFDYIVEKKR------MTEDEGRRFFQQIICAIEYCHRHKIVHRDLKP  136 (336)
T ss_dssp             ECSSEEEEEECCCCEEHHHHHHHHCS------CCHHHHHHHHHHHHHHHHHHHHHTCCCCCCST
T ss_pred             EeCCEEEEEEECCCCcHHHHHHHcCC------CCHHHHHHHHHHHHHHHHHHHHCCeEecCCch
Confidence            99999999999998899999987653      89999999999999999999999999999997

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.84  E-value=1.6e-20  Score=193.69  Aligned_cols=129  Identities=19%  Similarity=0.268  Sum_probs=116.3

Q ss_pred             ceecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChh-------hHHHHHHHHHHHHHhcccCCCCCCCeeEeE
Q 008813          410 TVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD-------FFDQSLDEIKLLKLVNKNDPADEHHILRLY  482 (552)
Q Consensus       410 dvi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~-------~~~~~lrEIkILk~L~hhd~~d~pnIVrL~  482 (552)
                      ..+.++|.+++.||+|+||.||+|.++.+++.||||+++....       ..+.+.+|+.+|+.++|      |||++++
T Consensus         8 ~~~~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~h------pnIv~l~   81 (361)
T 2yab_A            8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLH------PNIITLH   81 (361)
T ss_dssp             SCGGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCC------TTBCCEE
T ss_pred             CChhhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCC------cCCCcEE
Confidence            3466789999999999999999999999999999999986421       24678899999999998      9999999


Q ss_pred             eEEEeCCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          483 DYFYHLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       483 d~F~~~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      ++|....++||||||+.+ +|.+++.....      +++..++.|+.||+.||.|||++||||+|||+-
T Consensus        82 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~------l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~  144 (361)
T 2yab_A           82 DVYENRTDVVLILELVSGGELFDFLAQKES------LSEEEATSFIKQILDGVNYLHTKKIAHFDLKPE  144 (361)
T ss_dssp             EEEECSSEEEEEEECCCSCBHHHHHTTCSC------CBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGG
T ss_pred             EEEEeCCEEEEEEEcCCCCcHHHHHHhcCC------CCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHH
Confidence            999999999999999975 99999976442      899999999999999999999999999999973

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.84  E-value=1.8e-20  Score=192.43  Aligned_cols=134  Identities=21%  Similarity=0.244  Sum_probs=117.1

Q ss_pred             cceeeCceecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC---hhhHHHHHHHHHHHHHhcccCCCCCCCeeE
Q 008813          404 LPIILNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILR  480 (552)
Q Consensus       404 y~v~~gdvi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s---k~~~~~~lrEIkILk~L~hhd~~d~pnIVr  480 (552)
                      +.......+.++|++.+.||+|+||.||+|.++.+++.||||++...   ....+.+.+|+.+|+.|+|      ||||+
T Consensus        19 ~~~~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~h------pnIv~   92 (362)
T 2bdw_A           19 FMMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH------PNIVR   92 (362)
T ss_dssp             -----CCHHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCC------TTBCC
T ss_pred             EeecCCCCcccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCC------CCCCe
Confidence            33444556678999999999999999999999999999999999764   2344678899999999998      99999


Q ss_pred             eEeEEEeCCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          481 LYDYFYHLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       481 L~d~F~~~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      +++++...+++||||||+.+ +|.+++.....      +++..++.++.||+.||.|||++||||+|||+
T Consensus        93 ~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~------~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp  156 (362)
T 2bdw_A           93 LHDSIQEESFHYLVFDLVTGGELFEDIVAREF------YSEADASHCIQQILESIAYCHSNGIVHRNLKP  156 (362)
T ss_dssp             EEEEEECSSEEEEEECCCCSCBHHHHHTTCSC------CCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSG
T ss_pred             EEEEEEeCCEEEEEEecCCCCCHHHHHHHcCC------CCHHHHHHHHHHHHHHHHHHHHCCeEeccCch
Confidence            99999999999999999987 99999876542      89999999999999999999999999999997

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.84  E-value=3.7e-20  Score=183.09  Aligned_cols=127  Identities=14%  Similarity=0.198  Sum_probs=115.7

Q ss_pred             cCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC-hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEE
Q 008813          413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND-KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL  491 (552)
Q Consensus       413 ~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s-k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hL  491 (552)
                      .++|++.+.||+|+||.||+|.+..+++.||+|++... ....+.+.+|+++++.++|      |||+++++++...+.+
T Consensus         9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h------p~iv~~~~~~~~~~~~   82 (310)
T 3s95_A            9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEH------PNVLKFIGVLYKDKRL   82 (310)
T ss_dssp             GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCC------TTBCCEEEEEEETTEE
T ss_pred             hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCC------cCcccEEEEEecCCee
Confidence            47899999999999999999999999999999988653 4456788999999999998      9999999999999999


Q ss_pred             EEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          492 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       492 yIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      +|||||+.+ +|.++++....     .+++..++.|+.||+.||.|||++||||+|||+-
T Consensus        83 ~lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~  137 (310)
T 3s95_A           83 NFITEYIKGGTLRGIIKSMDS-----QYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSH  137 (310)
T ss_dssp             EEEEECCTTCBHHHHHHHCCT-----TSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSTT
T ss_pred             EEEEEecCCCcHHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCcC
Confidence            999999987 99999987543     2899999999999999999999999999999973

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=99.84  E-value=1.7e-20  Score=186.07  Aligned_cols=125  Identities=19%  Similarity=0.240  Sum_probs=113.8

Q ss_pred             ecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecCh-hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCE
Q 008813          412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK-DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH  490 (552)
Q Consensus       412 i~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk-~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~h  490 (552)
                      ..++|++++.||+|+||.||+|.+..+++.||||++.... ...+.+.+|+.+++.++|      |||++++++|...++
T Consensus        18 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~h------p~iv~~~~~~~~~~~   91 (297)
T 3fxz_A           18 PKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKN------PNIVNYLDSYLVGDE   91 (297)
T ss_dssp             GGGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCC------TTBCCEEEEEEETTE
T ss_pred             hhhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCC------CCCCeEeEEEEECCE
Confidence            4578999999999999999999999999999999997542 234678899999999998      999999999999999


Q ss_pred             EEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          491 LFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       491 LyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      +||||||+.+ +|.++++...       +++..++.++.||+.||.|||++||||+|||+
T Consensus        92 ~~lv~e~~~~~~L~~~~~~~~-------~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp  144 (297)
T 3fxz_A           92 LWVVMEYLAGGSLTDVVTETC-------MDEGQIAAVCRECLQALEFLHSNQVIHRDIKS  144 (297)
T ss_dssp             EEEEEECCTTCBHHHHHHHSC-------CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSG
T ss_pred             EEEEEECCCCCCHHHHHhhcC-------CCHHHHHHHHHHHHHHHHHHHhCCceeCCCCH
Confidence            9999999976 9999998643       89999999999999999999999999999997

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=99.84  E-value=2.3e-20  Score=186.80  Aligned_cols=128  Identities=17%  Similarity=0.177  Sum_probs=113.6

Q ss_pred             eecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCE
Q 008813          411 VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH  490 (552)
Q Consensus       411 vi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~h  490 (552)
                      ++.++|++.+.||+|+||.||+|.+..+++.||||++..... ...+.+|+.+++.|.+|     +||+++++++...++
T Consensus         6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~E~~~l~~l~~h-----~~i~~~~~~~~~~~~   79 (330)
T 2izr_A            6 MVGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR-APQLHLEYRFYKQLGSG-----DGIPQVYYFGPCGKY   79 (330)
T ss_dssp             EETTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS-SCCHHHHHHHHHHHCSC-----TTSCCEEEEEEETTE
T ss_pred             EEcCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc-hHHHHHHHHHHHHhhCC-----CCCCEEEEEEecCCc
Confidence            456789999999999999999999999999999999976432 34678999999999433     999999999999999


Q ss_pred             EEEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          491 LFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       491 LyIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ++|||||++++|.+++.....     .+++..++.|+.||+.||.|||++||||+|||+
T Consensus        80 ~~lv~e~~~~~L~~~~~~~~~-----~~~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp  133 (330)
T 2izr_A           80 NAMVLELLGPSLEDLFDLCDR-----TFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKP  133 (330)
T ss_dssp             EEEEEECCCCBHHHHHHHTTT-----CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCG
T ss_pred             cEEEEEeCCCCHHHHHHHcCC-----CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCH
Confidence            999999997799999987532     299999999999999999999999999999997

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.83  E-value=4.6e-20  Score=188.45  Aligned_cols=126  Identities=17%  Similarity=0.182  Sum_probs=114.0

Q ss_pred             ecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC----hhhHHHHHHHHHHHHHh-cccCCCCCCCeeEeEeEEE
Q 008813          412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND----KDFFDQSLDEIKLLKLV-NKNDPADEHHILRLYDYFY  486 (552)
Q Consensus       412 i~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s----k~~~~~~lrEIkILk~L-~hhd~~d~pnIVrL~d~F~  486 (552)
                      ..++|++++.||+|+||.||+|+++.+++.||||++++.    ......+.+|+.+|+.+ +|      |||++++++|.
T Consensus         7 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~h------p~iv~l~~~~~   80 (345)
T 3a8x_A            7 GLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNH------PFLVGLHSCFQ   80 (345)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTC------TTBCCEEEEEE
T ss_pred             chhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCC------CccCeEEEEEE
Confidence            346899999999999999999999999999999999864    23456688999999998 55      99999999999


Q ss_pred             eCCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          487 HLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       487 ~~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ..+++||||||+.+ +|.++++....      +++..++.|+.||+.||.|||++||||+|||+
T Consensus        81 ~~~~~~lv~e~~~gg~L~~~l~~~~~------l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp  138 (345)
T 3a8x_A           81 TESRLFFVIEYVNGGDLMFHMQRQRK------LPEEHARFYSAEISLALNYLHERGIIYRDLKL  138 (345)
T ss_dssp             CSSEEEEEECCCCSCBHHHHHHHHSS------CCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCG
T ss_pred             eCCEEEEEEeCCCCCcHHHHHHHcCC------CCHHHHHHHHHHHHHHHHHHHHCCceecCCCH
Confidence            99999999999976 99999987643      89999999999999999999999999999997

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.83  E-value=1.9e-20  Score=184.55  Aligned_cols=129  Identities=16%  Similarity=0.150  Sum_probs=111.3

Q ss_pred             ecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC--hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCC
Q 008813          412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE  489 (552)
Q Consensus       412 i~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s--k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~  489 (552)
                      +.++|++++.||+|+||.||+|+++.+++.||||+++..  ....+.+.+|+++|+.|+|      ||||+++++|....
T Consensus         4 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h------pniv~~~~~~~~~~   77 (332)
T 3qd2_B            4 YLTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEH------PGIVRYFNAWLETP   77 (332)
T ss_dssp             HHHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCC------TTBCCEEEEEEECC
T ss_pred             hhhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCC------CCEeeEEEEEEEec
Confidence            456899999999999999999999999999999999753  3345778999999999998      99999999986543


Q ss_pred             ---------------------------------------------------------EEEEEEecCCC-CHHHHHHhhcc
Q 008813          490 ---------------------------------------------------------HLFIVCELLRA-NLYEFQKFNQE  511 (552)
Q Consensus       490 ---------------------------------------------------------hLyIVmEll~G-sL~d~Lk~~~~  511 (552)
                                                                               +++||||||.+ +|.++++....
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~  157 (332)
T 3qd2_B           78 PEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCS  157 (332)
T ss_dssp             SCHHHHHHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCS
T ss_pred             cchhhhhhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccC
Confidence                                                                     48999999987 99999987543


Q ss_pred             CCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          512 SGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       512 ~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      .   ...++..++.|+.||+.||.|||++||||+|||+
T Consensus       158 ~---~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp  192 (332)
T 3qd2_B          158 L---EDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKP  192 (332)
T ss_dssp             G---GGSCHHHHHHHHHHHHHHHHHHHHTTEECCCCCG
T ss_pred             c---cchhhHHHHHHHHHHHHHHHHHHhCCeeecCCCc
Confidence            2   2267778999999999999999999999999997

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.83  E-value=2.4e-20  Score=187.78  Aligned_cols=128  Identities=20%  Similarity=0.273  Sum_probs=115.6

Q ss_pred             eecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChh-------hHHHHHHHHHHHHHhcccCCCCCCCeeEeEe
Q 008813          411 VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD-------FFDQSLDEIKLLKLVNKNDPADEHHILRLYD  483 (552)
Q Consensus       411 vi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~-------~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d  483 (552)
                      .+.++|.+.+.||+|+||.||+|.+..+++.||||+++....       ..+.+.+|+.+|+.++|      |||+++++
T Consensus         8 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h------p~iv~~~~   81 (326)
T 2y0a_A            8 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQH------PNVITLHE   81 (326)
T ss_dssp             CHHHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCC------TTBCCEEE
T ss_pred             CcccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCC------CCCCcEEE
Confidence            466789999999999999999999999999999999976421       24678899999999998      99999999


Q ss_pred             EEEeCCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          484 YFYHLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       484 ~F~~~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      ++....++||||||+.+ +|.+++.....      +++..++.|+.||+.||.|||++||||+|||+-
T Consensus        82 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~------~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~  143 (326)
T 2y0a_A           82 VYENKTDVILILELVAGGELFDFLAEKES------LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPE  143 (326)
T ss_dssp             EEECSSEEEEEEECCCSCBHHHHHTTSSC------CBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGG
T ss_pred             EEEeCCEEEEEEEcCCCCCHHHHHHhcCC------cCHHHHHHHHHHHHHHHHHHHHCCeEcCCCCHH
Confidence            99999999999999976 99999976432      899999999999999999999999999999973

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=99.83  E-value=8.5e-21  Score=199.21  Aligned_cols=126  Identities=19%  Similarity=0.210  Sum_probs=104.4

Q ss_pred             ecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC---hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeC
Q 008813          412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL  488 (552)
Q Consensus       412 i~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s---k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~  488 (552)
                      +.+||++++.||+|+||+||+|+++.+++.||||++...   ....+.+.+|+++|+.|+|      +|||++++++...
T Consensus        51 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h------~niv~l~~~~~~~  124 (458)
T 3rp9_A           51 IPDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNH------DHVVKVLDIVIPK  124 (458)
T ss_dssp             SCTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCC------TTBCCEEEECCCS
T ss_pred             cCCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCC------CCCCceEEEEecC
Confidence            457899999999999999999999999999999999753   3345678899999999998      9999999999543


Q ss_pred             -----CEEEEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          489 -----EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       489 -----~hLyIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                           .++||||||++++|.++++....      +++..++.|+.||+.||.|||++||||+|||+
T Consensus       125 ~~~~~~~~~lv~e~~~~~L~~~~~~~~~------l~~~~~~~~~~qi~~aL~~LH~~~iiHrDlKp  184 (458)
T 3rp9_A          125 DVEKFDELYVVLEIADSDFKKLFRTPVY------LTELHIKTLLYNLLVGVKYVHSAGILHRDLKP  184 (458)
T ss_dssp             CTTTCCCEEEEECCCSEEHHHHHHSSCC------CCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCG
T ss_pred             CcccCceEEEEEeccccchhhhcccCCC------CCHHHHHHHHHHHHHHHHHHHhCCcCCCCCCh
Confidence                 57999999999999999986543      99999999999999999999999999999997

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=99.83  E-value=3.5e-20  Score=190.10  Aligned_cols=127  Identities=23%  Similarity=0.309  Sum_probs=113.5

Q ss_pred             eecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecCh----hhHHHHHHHHHHHHHh-cccCCCCCCCeeEeEeEE
Q 008813          411 VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLV-NKNDPADEHHILRLYDYF  485 (552)
Q Consensus       411 vi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk----~~~~~~lrEIkILk~L-~hhd~~d~pnIVrL~d~F  485 (552)
                      +..++|++.+.||+|+||+||+|+++.+++.||||++++..    .......+|..+|+.+ +|      |||++++++|
T Consensus        14 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~h------p~iv~l~~~~   87 (345)
T 1xjd_A           14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEH------PFLTHMFCTF   87 (345)
T ss_dssp             --CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTC------TTBCCEEEEE
T ss_pred             CChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCC------CCCCcEEEEE
Confidence            34578999999999999999999999999999999998642    2345678999999987 55      9999999999


Q ss_pred             EeCCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          486 YHLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       486 ~~~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ...+++||||||+.+ +|.++++....      +++..++.|+.||+.||.|||++||||+|||+
T Consensus        88 ~~~~~~~lv~E~~~gg~L~~~l~~~~~------~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp  146 (345)
T 1xjd_A           88 QTKENLFFVMEYLNGGDLMYHIQSCHK------FDLSRATFYAAEIILGLQFLHSKGIVYRDLKL  146 (345)
T ss_dssp             ECSSEEEEEEECCTTCBHHHHHHHHSS------CCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCG
T ss_pred             EeCCEEEEEEeCCCCCcHHHHHHHcCC------CCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCh
Confidence            999999999999976 99999987653      89999999999999999999999999999997

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.83  E-value=1.5e-20  Score=187.76  Aligned_cols=131  Identities=23%  Similarity=0.277  Sum_probs=102.7

Q ss_pred             cCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecCh--hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCE
Q 008813          413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH  490 (552)
Q Consensus       413 ~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk--~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~h  490 (552)
                      .++|++++.||+|+||.||+|.+..+++.||||+++...  .....+.+|+.+|+.++|      |||+++++++...+.
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h------p~iv~~~~~~~~~~~   77 (317)
T 2pmi_A            4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKH------ENIVRLYDVIHTENK   77 (317)
T ss_dssp             ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCB------TTBCCEEEEECCTTE
T ss_pred             ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCC------CCcceEEEEEEECCe
Confidence            368999999999999999999999999999999997642  234678899999999998      999999999999999


Q ss_pred             EEEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          491 LFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       491 LyIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      +||||||+.++|.+++...........+++..++.++.||+.||.|||++||||+|||+
T Consensus        78 ~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp  136 (317)
T 2pmi_A           78 LTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKP  136 (317)
T ss_dssp             EEEEEECCCCBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCG
T ss_pred             EEEEEEecCCCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCh
Confidence            99999999999999998764322223489999999999999999999999999999997

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.83  E-value=4.2e-20  Score=177.80  Aligned_cols=131  Identities=18%  Similarity=0.169  Sum_probs=115.6

Q ss_pred             eecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC---hhhHHHHHHHHHHHHHh-cccCCCCCCCeeEeEeEEE
Q 008813          411 VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLV-NKNDPADEHHILRLYDYFY  486 (552)
Q Consensus       411 vi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s---k~~~~~~lrEIkILk~L-~hhd~~d~pnIVrL~d~F~  486 (552)
                      .+.++|++++.||+|+||.||+|.+..+++.||||+++..   ......+.+|+.++..+ +|      |||+++++++.
T Consensus         8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h------~~iv~~~~~~~   81 (289)
T 1x8b_A            8 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQH------SHVVRYFSAWA   81 (289)
T ss_dssp             HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSC------TTBCCEEEEEE
T ss_pred             cccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCC------CCeeeeeeeee
Confidence            4567899999999999999999999999999999999863   23346788999999999 55      99999999999


Q ss_pred             eCCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          487 HLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       487 ~~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ..++++|||||+.+ +|.+++.......  .++++..++.|+.||+.||.|||++||||+|||+
T Consensus        82 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~--~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp  143 (289)
T 1x8b_A           82 EDDHMLIQNEYCNGGSLADAISENYRIM--SYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKP  143 (289)
T ss_dssp             ETTEEEEEEECCTTCBHHHHHHHHHHHT--CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSG
T ss_pred             cCCeEEEEEEecCCCcHHHHHHhhcccc--cCCCHHHHHHHHHHHHHHHHHHHhCCEeecCCCH
Confidence            99999999999977 9999998754311  1389999999999999999999999999999996

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=99.83  E-value=3.1e-20  Score=187.76  Aligned_cols=126  Identities=18%  Similarity=0.319  Sum_probs=114.5

Q ss_pred             cCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecCh----hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeC
Q 008813          413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL  488 (552)
Q Consensus       413 ~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk----~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~  488 (552)
                      .++|++++.||+|+||+||+|+++.+++.||||++++..    ...+.+.+|+.+|+.++|      |||++++++|...
T Consensus         5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~h------p~Iv~~~~~~~~~   78 (318)
T 1fot_A            5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTH------PFIIRMWGTFQDA   78 (318)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCB------TTBCCEEEEEECS
T ss_pred             hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCC------CCCceEeEEEEeC
Confidence            468999999999999999999999999999999998642    234677899999999998      9999999999999


Q ss_pred             CEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          489 EHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       489 ~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      +++||||||+.+ +|.++++....      +++..++.++.||+.||.|||++||||+|||+-
T Consensus        79 ~~~~lv~e~~~gg~L~~~l~~~~~------~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~  135 (318)
T 1fot_A           79 QQIFMIMDYIEGGELFSLLRKSQR------FPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPE  135 (318)
T ss_dssp             SEEEEEECCCCSCBHHHHHHHTSS------CCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGG
T ss_pred             CEEEEEEeCCCCCCHHHHHHHcCC------CCHHHHHHHHHHHHHHHHHHHHCCccccCCChh
Confidence            999999999987 99999987543      899999999999999999999999999999973

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=99.83  E-value=5.1e-20  Score=179.64  Aligned_cols=130  Identities=20%  Similarity=0.249  Sum_probs=116.5

Q ss_pred             CceecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeC
Q 008813          409 NTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL  488 (552)
Q Consensus       409 gdvi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~  488 (552)
                      ++++.++|++.+.||+|+||.||+|.+..+++.||||++.... ....+.+|+.+++.+.+|     +||+++++++...
T Consensus         5 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~e~~~~~~l~~~-----~~i~~~~~~~~~~   78 (298)
T 1csn_A            5 NNVVGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS-DAPQLRDEYRTYKLLAGC-----TGIPNVYYFGQEG   78 (298)
T ss_dssp             -CEETTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT-TSCCHHHHHHHHHHTTTC-----TTCCCEEEEEEET
T ss_pred             CcccccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC-ccHHHHHHHHHHHHHhcC-----CCCCeEEeecCCC
Confidence            4578889999999999999999999999999999999997543 235678999999999654     9999999999999


Q ss_pred             CEEEEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          489 EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       489 ~hLyIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      .+.+|||||++++|.++++....     ++++..++.|+.||+.||.|||++||||+|||+
T Consensus        79 ~~~~lv~e~~~~~L~~~l~~~~~-----~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp  134 (298)
T 1csn_A           79 LHNVLVIDLLGPSLEDLLDLCGR-----KFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKP  134 (298)
T ss_dssp             TEEEEEEECCCCBHHHHHHHTTT-----CCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCG
T ss_pred             ceeEEEEEecCCCHHHHHHHhcc-----CCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCH
Confidence            99999999997799999987543     289999999999999999999999999999997

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.83  E-value=2.6e-20  Score=181.17  Aligned_cols=132  Identities=14%  Similarity=0.150  Sum_probs=120.2

Q ss_pred             CceecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeC
Q 008813          409 NTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL  488 (552)
Q Consensus       409 gdvi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~  488 (552)
                      +++...+|++.+.||+|+||.||+|.+..+++.||||+++......+.+.+|+.+++.++|      |||+++++++...
T Consensus         8 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h------~~i~~~~~~~~~~   81 (288)
T 3kfa_A            8 WEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH------PNLVQLLGVCTRE   81 (288)
T ss_dssp             TBCCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCSTHHHHHHHHHHHHHHCCC------TTBCCEEEEECSS
T ss_pred             ccccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCHHHHHHHHHHHHHHHhCCC------CCEeeEEEEEccC
Confidence            3456688999999999999999999999999999999998776667788999999999998      9999999999999


Q ss_pred             CEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          489 EHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       489 ~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      +.+|+|||++.+ +|.++++.....    ++++..++.|+.||+.||.|||++||||+|||+-
T Consensus        82 ~~~~~v~e~~~~~~L~~~~~~~~~~----~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~  140 (288)
T 3kfa_A           82 PPFYIITEFMTYGNLLDYLRECNRQ----EVSAVVLLYMATQISSAMEYLEKKNFIHRDLAAR  140 (288)
T ss_dssp             SSEEEEEECCTTEEHHHHHHHCCTT----TSCHHHHHHHHHHHHHHHHHHHHHTCCCSCCSGG
T ss_pred             CCEEEEEEcCCCCcHHHHHHhcccC----CccHhHHHHHHHHHHHHHHHHHHCCccCCCCCcc
Confidence            999999999986 999999875443    2899999999999999999999999999999963

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.83  E-value=5.6e-20  Score=181.17  Aligned_cols=125  Identities=18%  Similarity=0.210  Sum_probs=112.1

Q ss_pred             cCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC---hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCC
Q 008813          413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE  489 (552)
Q Consensus       413 ~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s---k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~  489 (552)
                      .+||++++.||+|+||.||+|.+..+++.||||++...   ....+.+.+|+++++.++|      |||+++++++...+
T Consensus         2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h------~~i~~~~~~~~~~~   75 (311)
T 4agu_A            2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKH------PNLVNLLEVFRRKR   75 (311)
T ss_dssp             -CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCC------TTBCCEEEEEEETT
T ss_pred             cccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCC------CCccchhheeecCC
Confidence            47899999999999999999999999999999998654   2335677899999999998      99999999999999


Q ss_pred             EEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          490 HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       490 hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      .++|||||+.+ +|.++++....      +++..++.|+.||+.||.|||++||||+|||+
T Consensus        76 ~~~lv~e~~~~~~l~~~~~~~~~------~~~~~~~~i~~~l~~~l~~lH~~~ivH~dlkp  130 (311)
T 4agu_A           76 RLHLVFEYCDHTVLHELDRYQRG------VPEHLVKSITWQTLQAVNFCHKHNCIHRDVKP  130 (311)
T ss_dssp             EEEEEEECCSEEHHHHHHHTSSC------CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSG
T ss_pred             eEEEEEEeCCCchHHHHHhhhcC------CCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCh
Confidence            99999999998 67777665432      89999999999999999999999999999997

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=99.83  E-value=2.5e-20  Score=195.34  Aligned_cols=127  Identities=23%  Similarity=0.236  Sum_probs=115.2

Q ss_pred             eecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC---hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEe
Q 008813          411 VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH  487 (552)
Q Consensus       411 vi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s---k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~  487 (552)
                      .+.++|++++.||+|+||.||+|++..+++.||||+++..   ....+.+.+|+++|+.++|      +||+++++++..
T Consensus        23 ~i~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h------~nIv~l~~~~~~   96 (432)
T 3n9x_A           23 HVPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKS------DYIIRLYDLIIP   96 (432)
T ss_dssp             CCCTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCC------TTBCCEEEECCC
T ss_pred             eecCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCC------CCcceEEEEEec
Confidence            3567999999999999999999999999999999999763   2345678899999999998      999999999986


Q ss_pred             C-----CEEEEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          488 L-----EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       488 ~-----~hLyIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      .     ..+||||||++++|.++++....      +++..++.|+.||+.||.|||++||||+|||+
T Consensus        97 ~~~~~~~~~~lv~e~~~~~L~~~~~~~~~------l~~~~~~~i~~qil~aL~~LH~~givHrDlkp  157 (432)
T 3n9x_A           97 DDLLKFDELYIVLEIADSDLKKLFKTPIF------LTEEHIKTILYNLLLGENFIHESGIIHRDLKP  157 (432)
T ss_dssp             SCTTTCCCEEEEEECCSEEHHHHHHSSCC------CCHHHHHHHHHHHHHHHHHHHHTTEECCCCCG
T ss_pred             CCCCcCCeEEEEEecCCcCHHHHHhccCC------CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH
Confidence            6     67999999999999999986543      89999999999999999999999999999997

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.83  E-value=6.7e-20  Score=177.95  Aligned_cols=128  Identities=21%  Similarity=0.242  Sum_probs=115.9

Q ss_pred             eecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC---hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEe
Q 008813          411 VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH  487 (552)
Q Consensus       411 vi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s---k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~  487 (552)
                      .+.++|++++.||+|+||.||+|.+..+++.||+|++...   ....+.+.+|+.+++.++|      |||+++++++..
T Consensus         3 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h------~~i~~~~~~~~~   76 (284)
T 3kk8_A            3 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH------PNIVRLHDSIQE   76 (284)
T ss_dssp             TTTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCC------TTBCCEEEEEEC
T ss_pred             hhhhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCC------CCcCeEEEEEEc
Confidence            3568999999999999999999999999999999999764   2344678899999999998      999999999999


Q ss_pred             CCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          488 LEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       488 ~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      .+..++||||+.+ +|.+++.....      +++..++.++.||+.||.|||++||||+|||+-
T Consensus        77 ~~~~~~v~e~~~~~~l~~~~~~~~~------~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~  134 (284)
T 3kk8_A           77 ESFHYLVFDLVTGGELFEDIVAREF------YSEADASHCIQQILESIAYCHSNGIVHRNLKPE  134 (284)
T ss_dssp             SSEEEEEECCCCSCBHHHHHHHHSS------CCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGG
T ss_pred             CCEEEEEEecCCCCCHHHHHHhcCC------CCHHHHHHHHHHHHHHHHHHHHCCcCcCCCCHH
Confidence            9999999999987 99998887643      899999999999999999999999999999873

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.83  E-value=4.3e-20  Score=182.35  Aligned_cols=129  Identities=17%  Similarity=0.233  Sum_probs=114.2

Q ss_pred             eecCceEEE-EEeccCCceEEEEEEECCCCcEEEEEEEecCh-hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeC
Q 008813          411 VIAGRYYVT-EYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK-DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL  488 (552)
Q Consensus       411 vi~~RY~Il-e~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk-~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~  488 (552)
                      .+.++|++. +.||+|+||.||+|.+..+++.||||+++... .....+.+|+.+|+++.+|     |||+++++++...
T Consensus         9 ~~~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h-----~~i~~~~~~~~~~   83 (316)
T 2ac3_A            9 RFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGH-----RNVLELIEFFEEE   83 (316)
T ss_dssp             CTTTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCC-----TTBCCEEEEEEET
T ss_pred             ccceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCC-----CCeeeEEEEEeeC
Confidence            356789995 78999999999999999999999999997642 3356788999999996433     9999999999999


Q ss_pred             CEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          489 EHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       489 ~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      +++||||||+.+ +|.+++.....      +++..++.++.||+.||.|||++||||+|||+-
T Consensus        84 ~~~~lv~e~~~~~~L~~~l~~~~~------~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~  140 (316)
T 2ac3_A           84 DRFYLVFEKMRGGSILSHIHKRRH------FNELEASVVVQDVASALDFLHNKGIAHRDLKPE  140 (316)
T ss_dssp             TEEEEEEECCTTCBHHHHHHHHSS------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGG
T ss_pred             CEEEEEEEcCCCCcHHHHHhccCC------CCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHH
Confidence            999999999986 99999987643      899999999999999999999999999999973

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=99.83  E-value=2.6e-20  Score=191.20  Aligned_cols=130  Identities=16%  Similarity=0.213  Sum_probs=107.5

Q ss_pred             eCceecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC---hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeE
Q 008813          408 LNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDY  484 (552)
Q Consensus       408 ~gdvi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s---k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~  484 (552)
                      ++..+.+||++++.||+|+||.||+|.+..+++.||||++...   ........+|+.+|+.+.+|     +||++++++
T Consensus         3 v~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h-----~niv~l~~~   77 (388)
T 3oz6_A            3 VDRHVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGH-----ENIVNLLNV   77 (388)
T ss_dssp             -CHHHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTC-----TTBCCEEEE
T ss_pred             ccCcccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCC-----CCCCeeeeE
Confidence            3456678999999999999999999999999999999998653   33456788999999999833     999999999


Q ss_pred             EEeCC--EEEEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          485 FYHLE--HLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       485 F~~~~--hLyIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      +...+  ++|||||||.++|..+++...       +++..++.++.||+.||.|||++||||+|||+
T Consensus        78 ~~~~~~~~~~lv~e~~~~~L~~~~~~~~-------~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp  137 (388)
T 3oz6_A           78 LRADNDRDVYLVFDYMETDLHAVIRANI-------LEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKP  137 (388)
T ss_dssp             EECTTSSCEEEEEECCSEEHHHHHHHTC-------CCHHHHHHHHHHHHHHHHHHHHTTEECCCCCG
T ss_pred             EecCCCCEEEEEecccCcCHHHHHHcCC-------CCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCH
Confidence            98654  799999999999999998642       89999999999999999999999999999997

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.83  E-value=3.3e-20  Score=193.77  Aligned_cols=128  Identities=18%  Similarity=0.217  Sum_probs=116.3

Q ss_pred             ceecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecCh----hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEE
Q 008813          410 TVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYF  485 (552)
Q Consensus       410 dvi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk----~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F  485 (552)
                      ++..++|++++.||+|+||.||+|++..+++.||||++....    .....+.+|+.+|+.++|      ||||+++++|
T Consensus        11 ~v~~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~h------p~Iv~l~~~~   84 (384)
T 4fr4_A           11 DVNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEH------PFLVNLWYSF   84 (384)
T ss_dssp             CCCGGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCC------TTBCCEEEEE
T ss_pred             CCChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCC------CCCCcEEEEE
Confidence            455688999999999999999999999999999999997642    234678899999999998      9999999999


Q ss_pred             EeCCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          486 YHLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       486 ~~~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ...+.+||||||+.+ +|..+++....      +++..++.|+.||+.||.|||++||||+|||+
T Consensus        85 ~~~~~~~lv~e~~~gg~L~~~l~~~~~------l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp  143 (384)
T 4fr4_A           85 QDEEDMFMVVDLLLGGDLRYHLQQNVH------FKEETVKLFICELVMALDYLQNQRIIHRDMKP  143 (384)
T ss_dssp             ECSSEEEEEECCCTTEEHHHHHHTTCC------CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSG
T ss_pred             EeCCEEEEEEecCCCCcHHHHHHhcCC------CCHHHHHHHHHHHHHHHHHHHHCCceeccCcH
Confidence            999999999999977 99999987543      89999999999999999999999999999997

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=99.83  E-value=3.9e-20  Score=189.64  Aligned_cols=126  Identities=18%  Similarity=0.299  Sum_probs=114.9

Q ss_pred             ecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecCh----hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEe
Q 008813          412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH  487 (552)
Q Consensus       412 i~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk----~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~  487 (552)
                      ..++|++++.||+|+||.||+|+++.+++.||||+++...    ...+.+.+|+++|+.++|      |||++++++|..
T Consensus        39 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~h------p~iv~~~~~~~~  112 (350)
T 1rdq_E           39 QLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF------PFLVKLEFSFKD  112 (350)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCC------TTBCCEEEEEEC
T ss_pred             CHHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCC------CCCCeEEEEEEc
Confidence            4478999999999999999999999999999999997642    234678899999999988      999999999999


Q ss_pred             CCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          488 LEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       488 ~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      .+++||||||+.+ +|.++++....      +++..++.|+.||+.||.|||++||||+|||+
T Consensus       113 ~~~~~lv~e~~~gg~L~~~l~~~~~------~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp  169 (350)
T 1rdq_E          113 NSNLYMVMEYVAGGEMFSHLRRIGR------FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKP  169 (350)
T ss_dssp             SSEEEEEEECCTTCBHHHHHHHHCC------CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSG
T ss_pred             CCEEEEEEcCCCCCcHHHHHHHcCC------CCHHHHHHHHHHHHHHHHHHHHCCcccccCcc
Confidence            9999999999976 99999987653      89999999999999999999999999999997

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=99.83  E-value=2.8e-20  Score=197.91  Aligned_cols=135  Identities=21%  Similarity=0.250  Sum_probs=116.6

Q ss_pred             CCCcceeeCc---eecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC---hhhHHHHHHHHHHHHHhcccCCCC
Q 008813          401 NKDLPIILNT---VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPAD  474 (552)
Q Consensus       401 ~~~y~v~~gd---vi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s---k~~~~~~lrEIkILk~L~hhd~~d  474 (552)
                      ...|++.+++   .+.+||++++.||+|+||.||+|++..+++.||||++...   ....+.+.+|+++|+.++|     
T Consensus        46 ~~~~~~~~~~~~~~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h-----  120 (464)
T 3ttj_A           46 NQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH-----  120 (464)
T ss_dssp             CCEEEEEC--CEEEEETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCC-----
T ss_pred             ccceeeecCCcceeecCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCC-----
Confidence            3455565555   4568999999999999999999999999999999999763   3345678899999999998     


Q ss_pred             CCCeeEeEeEEEeC------CEEEEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecc
Q 008813          475 EHHILRLYDYFYHL------EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILF  548 (552)
Q Consensus       475 ~pnIVrL~d~F~~~------~hLyIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~  548 (552)
                       ||||+++++|...      .++||||||+.++|.+.+...        +++..++.|+.||+.||.|||++||||+|||
T Consensus       121 -pnIv~l~~~~~~~~~~~~~~~~~lv~E~~~~~l~~~~~~~--------l~~~~~~~~~~qil~aL~~lH~~~iiHrDlk  191 (464)
T 3ttj_A          121 -KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME--------LDHERMSYLLYQMLCGIKHLHSAGIIHRDLK  191 (464)
T ss_dssp             -TTBCCCSEEECSCCSTTTCCEEEEEEECCSEEHHHHHTSC--------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCC
T ss_pred             -CCCCcEEEEEccCCccccCCeEEEEEeCCCCCHHHHHhhc--------CCHHHHHHHHHHHHHHHHHHHHCCcccCCCC
Confidence             9999999999754      468999999999988877531        8999999999999999999999999999999


Q ss_pred             c
Q 008813          549 C  549 (552)
Q Consensus       549 ~  549 (552)
                      +
T Consensus       192 p  192 (464)
T 3ttj_A          192 P  192 (464)
T ss_dssp             G
T ss_pred             h
Confidence            7

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.83  E-value=5.6e-20  Score=178.42  Aligned_cols=128  Identities=20%  Similarity=0.266  Sum_probs=115.6

Q ss_pred             eecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChh-------hHHHHHHHHHHHHHhcccCCCCCCCeeEeEe
Q 008813          411 VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD-------FFDQSLDEIKLLKLVNKNDPADEHHILRLYD  483 (552)
Q Consensus       411 vi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~-------~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d  483 (552)
                      ++.++|++++.||+|+||.||+|++..+++.||||+++....       ..+.+.+|+.+++.++|      |||+++++
T Consensus         2 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h------~~i~~~~~   75 (283)
T 3bhy_A            2 MVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRH------PNIITLHD   75 (283)
T ss_dssp             CHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCC------TTBCCEEE
T ss_pred             chhhhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCC------CCeeehhh
Confidence            456789999999999999999999999999999999976421       25678899999999998      99999999


Q ss_pred             EEEeCCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          484 YFYHLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       484 ~F~~~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      ++.....+++|||++.+ +|.+++.....      +++..++.++.||+.||.|||++||+|+||++-
T Consensus        76 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~------~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~  137 (283)
T 3bhy_A           76 IFENKTDVVLILELVSGGELFDFLAEKES------LTEDEATQFLKQILDGVHYLHSKRIAHFDLKPE  137 (283)
T ss_dssp             EEECSSEEEEEEECCCSCBHHHHHHHHSS------CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGG
T ss_pred             eecCCCeEEEEEeecCCCcHHHHHHhcCC------CCHHHHHHHHHHHHHHHHHHHhCCccCCCCChH
Confidence            99999999999999975 99999986543      899999999999999999999999999999873

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.83  E-value=1.7e-20  Score=186.36  Aligned_cols=129  Identities=22%  Similarity=0.192  Sum_probs=114.9

Q ss_pred             CceecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC----hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeE
Q 008813          409 NTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND----KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDY  484 (552)
Q Consensus       409 gdvi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s----k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~  484 (552)
                      ...+.+||++++.||+|+||.||+|++..+++.||||+++..    ......+.+|+.+++.++|      |||++++++
T Consensus         7 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h------p~iv~~~~~   80 (311)
T 3ork_A            7 PSHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNH------PAIVAVYDT   80 (311)
T ss_dssp             CSEETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCC------TTBCCEEEE
T ss_pred             cceecCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCC------CCcceEEEe
Confidence            356789999999999999999999999999999999999764    2344678899999999988      999999999


Q ss_pred             EEeCC----EEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          485 FYHLE----HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       485 F~~~~----hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      +....    .+||||||+.+ +|.++++....      +++..++.|+.||+.||.|||++||||+|||+
T Consensus        81 ~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~------~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp  144 (311)
T 3ork_A           81 GEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP------MTPKRAIEVIADACQALNFSHQNGIIHRDVKP  144 (311)
T ss_dssp             EEEEETTEEEEEEEEECCCEEEHHHHHHHHCS------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCG
T ss_pred             eeccCCCCcccEEEEecCCCCCHHHHHHhcCC------CCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCH
Confidence            88653    45999999976 99999987653      89999999999999999999999999999997

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.83  E-value=3.5e-20  Score=181.72  Aligned_cols=124  Identities=23%  Similarity=0.256  Sum_probs=112.1

Q ss_pred             CceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecCh---hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCE
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH  490 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk---~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~h  490 (552)
                      ++|++++.||+|+||.||+|++ .+++.||||+++...   .....+.+|+.+++.++|      |||+++++++...++
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h------~~iv~~~~~~~~~~~   74 (288)
T 1ob3_A            2 EKYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELKH------SNIVKLYDVIHTKKR   74 (288)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEE-TTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCC------TTBCCEEEEEECSSC
T ss_pred             ccchhhhhcccCCCEEEEEEEc-CCCCEEEEEEEeccccccccchhHHHHHHHHHhcCC------CCEeeeeeEEccCCe
Confidence            5899999999999999999998 678999999997542   234678899999999998      999999999999999


Q ss_pred             EEEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          491 LFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       491 LyIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      +|||||++.++|.+++.....     .+++..++.++.||+.||.|||++||||+|||+
T Consensus        75 ~~lv~e~~~~~l~~~~~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp  128 (288)
T 1ob3_A           75 LVLVFEHLDQDLKKLLDVCEG-----GLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKP  128 (288)
T ss_dssp             EEEEEECCSEEHHHHHHTSTT-----CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCG
T ss_pred             EEEEEEecCCCHHHHHHhccc-----CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCH
Confidence            999999999999999986542     289999999999999999999999999999997

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.83  E-value=1.9e-20  Score=188.60  Aligned_cols=126  Identities=15%  Similarity=0.151  Sum_probs=112.3

Q ss_pred             ecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecCh--hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCC
Q 008813          412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE  489 (552)
Q Consensus       412 i~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk--~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~  489 (552)
                      +.++|++++.||+|+||.||+|.+..+++.||||++....  ...+.+.+|+.+++.++|      +||+++++++...+
T Consensus         5 ~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h------pnIv~~~~~~~~~~   78 (323)
T 3tki_A            5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH------ENVVKFYGHRREGN   78 (323)
T ss_dssp             TTTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCC------TTBCCEEEEEECSS
T ss_pred             HhhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCC------CCCCeEEEEEecCC
Confidence            4578999999999999999999999999999999997542  234668899999999998      99999999999999


Q ss_pred             EEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          490 HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       490 hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      .+||||||+.+ +|.++++....      +++..++.|+.||+.||.|||++||||+|||+
T Consensus        79 ~~~lv~e~~~~~~L~~~l~~~~~------~~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp  133 (323)
T 3tki_A           79 IQYLFLEYCSGGELFDRIEPDIG------MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKP  133 (323)
T ss_dssp             EEEEEEECCTTEEGGGGSBTTTB------CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSG
T ss_pred             eEEEEEEcCCCCcHHHHHhhcCC------CCHHHHHHHHHHHHHHHHHHHHCCccccccch
Confidence            99999999987 99998875433      89999999999999999999999999999997

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.83  E-value=5.2e-20  Score=180.54  Aligned_cols=129  Identities=21%  Similarity=0.231  Sum_probs=109.9

Q ss_pred             CceecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC-hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEE-
Q 008813          409 NTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND-KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFY-  486 (552)
Q Consensus       409 gdvi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s-k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~-  486 (552)
                      +..+.+||++++.||+|+||.||+|.+..+++.||||++... ....+.+.+|+++++.++|      |||+++++++. 
T Consensus         6 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h------~~iv~~~~~~~~   79 (320)
T 2i6l_A            6 GFDLGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDH------DNIVKVFEILGP   79 (320)
T ss_dssp             CEEETTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCC------TTBCCEEEEECT
T ss_pred             cCccCCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCC------CCeeEEEEeccc
Confidence            456789999999999999999999999999999999998764 3445778899999999998      99999999873 


Q ss_pred             -------------eCCEEEEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          487 -------------HLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       487 -------------~~~hLyIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                                   ....+||||||+.++|.++++...       +++..++.++.||+.||.|||++||+|+|||+-
T Consensus        80 ~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~-------~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~  149 (320)
T 2i6l_A           80 SGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGP-------LLEEHARLFMYQLLRGLKYIHSANVLHRDLKPA  149 (320)
T ss_dssp             TSCBCCC----CCSCSEEEEEEECCSEEHHHHHTTCC-------CCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGG
T ss_pred             cccccccccccccccCceeEEeeccCCCHHHHhhcCC-------ccHHHHHHHHHHHHHHHHHHHhCCEecCCCCHH
Confidence                         447899999999999999986422       899999999999999999999999999999973

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.83  E-value=5.5e-20  Score=178.31  Aligned_cols=126  Identities=21%  Similarity=0.229  Sum_probs=115.3

Q ss_pred             ecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC-hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCE
Q 008813          412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND-KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH  490 (552)
Q Consensus       412 i~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s-k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~h  490 (552)
                      +.++|++.+.||+|+||.||+|.+..++..||+|++... ....+.+.+|+++++.++|      |||+++++++...+.
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h------~~i~~~~~~~~~~~~   80 (277)
T 3f3z_A            7 INQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDH------PNIIRLYETFEDNTD   80 (277)
T ss_dssp             HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCC------TTBCCEEEEEECSSE
T ss_pred             hhhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCC------CCEeeEEEEEecCCe
Confidence            567899999999999999999999999999999999764 2235678899999999988      999999999999999


Q ss_pred             EEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          491 LFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       491 LyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      +||||||+.+ +|.+++.....      +++..++.|+.||+.||.|||++||+|+||++
T Consensus        81 ~~lv~e~~~~~~L~~~~~~~~~------~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp  134 (277)
T 3f3z_A           81 IYLVMELCTGGELFERVVHKRV------FRESDAARIMKDVLSAVAYCHKLNVAHRDLKP  134 (277)
T ss_dssp             EEEEEECCCSCBHHHHHHHHCS------CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSG
T ss_pred             EEEEEeccCCCcHHHHHHHcCC------CCHHHHHHHHHHHHHHHHHHHHCCccCCCCCH
Confidence            9999999977 99999887653      89999999999999999999999999999997

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=99.82  E-value=5.8e-20  Score=192.80  Aligned_cols=126  Identities=15%  Similarity=0.182  Sum_probs=112.6

Q ss_pred             cCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecCh----hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeC
Q 008813          413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL  488 (552)
Q Consensus       413 ~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk----~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~  488 (552)
                      ..+|++++.||+|+||+||+|+++.+++.||||++++..    .....+.+|+.+|+.+.+|     ||||+++++|...
T Consensus        51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~h-----p~Iv~l~~~~~~~  125 (396)
T 4dc2_A           51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNH-----PFLVGLHSCFQTE  125 (396)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTC-----TTBCCEEEEEECS
T ss_pred             hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCC-----CCcCeeEEEEEEC
Confidence            468999999999999999999999999999999998642    2334678999999988433     9999999999999


Q ss_pred             CEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          489 EHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       489 ~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      +++||||||+.+ +|..+++..+.      +++..++.|+.||+.||.|||++||||+|||+
T Consensus       126 ~~~~lV~E~~~gg~L~~~l~~~~~------l~~~~~~~~~~qi~~aL~~LH~~givHrDLKp  181 (396)
T 4dc2_A          126 SRLFFVIEYVNGGDLMFHMQRQRK------LPEEHARFYSAEISLALNYLHERGIIYRDLKL  181 (396)
T ss_dssp             SEEEEEEECCTTCBHHHHHHHHSS------CCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCG
T ss_pred             CEEEEEEEcCCCCcHHHHHHHcCC------CCHHHHHHHHHHHHHHHHHHHHCCEEeccCCH
Confidence            999999999987 99999987653      99999999999999999999999999999997

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.82  E-value=4.7e-20  Score=179.50  Aligned_cols=129  Identities=15%  Similarity=0.240  Sum_probs=115.4

Q ss_pred             ceecCceEEEEEeccCCceEEEEEEECCCC-------cEEEEEEEecC-hhhHHHHHHHHHHHHHhcccCCCCCCCeeEe
Q 008813          410 TVIAGRYYVTEYLGSAAFSKVFQAQDLHTG-------VDVCLKIIKND-KDFFDQSLDEIKLLKLVNKNDPADEHHILRL  481 (552)
Q Consensus       410 dvi~~RY~Ile~LGkG~FG~VykA~Dkktg-------~~VAVKIIk~s-k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL  481 (552)
                      ++..++|++.+.||+|+||.||+|.+..++       +.||+|++... ....+.+.+|+.+++.++|      |||+++
T Consensus         4 ~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h------~~iv~~   77 (289)
T 4fvq_A            4 KIRNEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSH------KHLVLN   77 (289)
T ss_dssp             BCCGGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCC------TTBCCE
T ss_pred             EechhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCC------CCEeEE
Confidence            345679999999999999999999998776       47999999764 3445778999999999998      999999


Q ss_pred             EeEEEeCCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          482 YDYFYHLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       482 ~d~F~~~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ++++...+..+|||||+.+ +|.++++.....     +++..++.|+.||+.||.|||++||||+|||+
T Consensus        78 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~-----~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp  141 (289)
T 4fvq_A           78 YGVCVCGDENILVQEFVKFGSLDTYLKKNKNC-----INILWKLEVAKQLAAAMHFLEENTLIHGNVCA  141 (289)
T ss_dssp             EEEECCTTCCEEEEECCTTCBHHHHHHHTGGG-----CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCG
T ss_pred             EEEEEeCCCCEEEEECCCCCCHHHHHHhCCCC-----CCHHHHHHHHHHHHHHHHHHhhCCeECCCcCc
Confidence            9999999999999999986 999999876532     89999999999999999999999999999997

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.82  E-value=3.3e-20  Score=195.30  Aligned_cols=125  Identities=16%  Similarity=0.130  Sum_probs=112.8

Q ss_pred             ecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChh----hHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEe
Q 008813          412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD----FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH  487 (552)
Q Consensus       412 i~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~----~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~  487 (552)
                      ..++|++++.||+|+||+||+|+++.+++.||||++++...    ....+.+|+.+++.++|      ||||+++++|..
T Consensus        67 ~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~h------p~Iv~l~~~~~~  140 (410)
T 3v8s_A           67 KAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANS------PWVVQLFYAFQD  140 (410)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCC------TTBCCEEEEEEC
T ss_pred             CccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCC------CCCCeEEEEEEE
Confidence            44789999999999999999999999999999999976321    22457899999999998      999999999999


Q ss_pred             CCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          488 LEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       488 ~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      .+++|||||||.+ +|.++++...       +++..++.|+.||+.||.|||++||||+|||+
T Consensus       141 ~~~~~lV~E~~~gg~L~~~l~~~~-------~~e~~~~~~~~qi~~aL~~LH~~givHrDLKp  196 (410)
T 3v8s_A          141 DRYLYMVMEYMPGGDLVNLMSNYD-------VPEKWARFYTAEVVLALDAIHSMGFIHRDVKP  196 (410)
T ss_dssp             SSEEEEEECCCTTEEHHHHHHHCC-------CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSG
T ss_pred             CCEEEEEEeCCCCCcHHHHHHcCC-------CCHHHHHHHHHHHHHHHHHHHHCCeEeccCCH
Confidence            9999999999976 9999987542       89999999999999999999999999999997

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=99.82  E-value=7.7e-20  Score=184.27  Aligned_cols=146  Identities=31%  Similarity=0.378  Sum_probs=123.0

Q ss_pred             CCCCcceeeCcee-cCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChhhHHHHHHHHHHHHHhcccCC-----C
Q 008813          400 ENKDLPIILNTVI-AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDP-----A  473 (552)
Q Consensus       400 e~~~y~v~~gdvi-~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd~-----~  473 (552)
                      ..+.+++..++.+ .++|++++.||+|+||.||+|.+..+++.||||+++........+.+|+++++.+++...     .
T Consensus         4 ~~~~~p~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~   83 (373)
T 1q8y_A            4 PGGYHPAFKGEPYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSM   83 (373)
T ss_dssp             ---CCCCCTTCEETTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHH
T ss_pred             CCCceeeecCCcccCCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCccchhhhhHHHHHHHHhhcccccchhcc
Confidence            3456667666665 479999999999999999999999999999999998776666788999999999984110     0


Q ss_pred             CCCCeeEeEeEEEeCC----EEEEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhC-CCeeeecc
Q 008813          474 DEHHILRLYDYFYHLE----HLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLL-LVIYFILF  548 (552)
Q Consensus       474 d~pnIVrL~d~F~~~~----hLyIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~-gIIH~~L~  548 (552)
                      +++||+++++++...+    +++||||+++++|.+++.......    +++..++.|+.||+.||.|||++ ||||+|||
T Consensus        84 ~~~~i~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~----~~~~~~~~i~~qi~~aL~~lH~~~~ivH~Dik  159 (373)
T 1q8y_A           84 GANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRG----IPLIYVKQISKQLLLGLDYMHRRCGIIHTDIK  159 (373)
T ss_dssp             HHTTBCCCCEEEEEEETTEEEEEEEECCCCEEHHHHHHHTTTSC----CCHHHHHHHHHHHHHHHHHHHHTTCEECSCCS
T ss_pred             ccchHHHHHHHhhccCCCCceEEEEEecCCCCHHHHHHHhhccC----CcHHHHHHHHHHHHHHHHHHHhcCCEEecCCC
Confidence            1289999999998764    899999999779999998765433    89999999999999999999998 99999999


Q ss_pred             c
Q 008813          549 C  549 (552)
Q Consensus       549 ~  549 (552)
                      +
T Consensus       160 p  160 (373)
T 1q8y_A          160 P  160 (373)
T ss_dssp             G
T ss_pred             h
Confidence            7

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.82  E-value=9.7e-20  Score=178.41  Aligned_cols=130  Identities=21%  Similarity=0.229  Sum_probs=116.9

Q ss_pred             CceecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC----hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeE
Q 008813          409 NTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND----KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDY  484 (552)
Q Consensus       409 gdvi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s----k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~  484 (552)
                      .....++|.+.+.||+|+||.||+|.+..+++.||+|++...    ....+.+.+|+.+++.++|      +||++++++
T Consensus        10 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h------~~iv~~~~~   83 (294)
T 2rku_A           10 DPRSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAH------QHVVGFHGF   83 (294)
T ss_dssp             ETTTTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCC------TTBCCEEEE
T ss_pred             CCCcccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCC------CCEeeeeee
Confidence            334567999999999999999999999999999999999754    2345678899999999988      999999999


Q ss_pred             EEeCCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          485 FYHLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       485 F~~~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      +...+.++||||++.+ +|.++++....      +++..++.++.||+.||.|||++||+|+||++-
T Consensus        84 ~~~~~~~~lv~e~~~~~~L~~~~~~~~~------~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~  144 (294)
T 2rku_A           84 FEDNDFVFVVLELCRRRSLLELHKRRKA------LTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLG  144 (294)
T ss_dssp             EECSSEEEEEEECCTTCBHHHHHHHHCS------CCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGG
T ss_pred             eccCCEEEEEEecCCCCCHHHHHHhcCC------CCHHHHHHHHHHHHHHHHHHHHCCccccCCChH
Confidence            9999999999999986 99999887643      899999999999999999999999999999863

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.82  E-value=5.9e-20  Score=183.18  Aligned_cols=128  Identities=20%  Similarity=0.291  Sum_probs=115.9

Q ss_pred             ceecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChh-------hHHHHHHHHHHHHHhcccCCCCCCCeeEeE
Q 008813          410 TVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD-------FFDQSLDEIKLLKLVNKNDPADEHHILRLY  482 (552)
Q Consensus       410 dvi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~-------~~~~~lrEIkILk~L~hhd~~d~pnIVrL~  482 (552)
                      ..+.++|++.+.||+|+||.||+|.+..+++.||||+++....       ..+.+.+|+.+|+.++|      |||++++
T Consensus         8 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h------~~iv~~~   81 (321)
T 2a2a_A            8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLH------HNVITLH   81 (321)
T ss_dssp             SCHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCC------TTBCCEE
T ss_pred             hhhhccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCC------CCcceEE
Confidence            4567889999999999999999999999999999999976421       24678899999999998      9999999


Q ss_pred             eEEEeCCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          483 DYFYHLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       483 d~F~~~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      +++...+.++|||||+.+ +|.+++.....      +++..++.++.||+.||.|||++||+|+|||+
T Consensus        82 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~------~~~~~~~~i~~qi~~aL~~lH~~~ivH~dikp  143 (321)
T 2a2a_A           82 DVYENRTDVVLILELVSGGELFDFLAQKES------LSEEEATSFIKQILDGVNYLHTKKIAHFDLKP  143 (321)
T ss_dssp             EEEECSSEEEEEECCCCSCBHHHHHHTCSC------EEHHHHHHHHHHHHHHHHHHHHTTEECCCCSG
T ss_pred             EEEecCCEEEEEEEcCCCCcHHHHHHhcCC------CCHHHHHHHHHHHHHHHHHHHhCCeecCCCCh
Confidence            999999999999999976 99999986542      89999999999999999999999999999997

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.82  E-value=6.8e-20  Score=179.79  Aligned_cols=131  Identities=22%  Similarity=0.310  Sum_probs=116.4

Q ss_pred             eecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecCh--hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeC
Q 008813          411 VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL  488 (552)
Q Consensus       411 vi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk--~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~  488 (552)
                      .+.++|.+.+.||+|+||.||+|.+..+++.||+|++....  ...+.+.+|+++|+.++|      |||+++++++...
T Consensus        19 ~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h------p~iv~~~~~~~~~   92 (285)
T 3is5_A           19 TIDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDH------PNIIKIFEVFEDY   92 (285)
T ss_dssp             CHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCC------TTBCCEEEEEECS
T ss_pred             ChhhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCC------chHHhHHHheecC
Confidence            46689999999999999999999999999999999998653  234678899999999998      9999999999999


Q ss_pred             CEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          489 EHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       489 ~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      +.+||||||+.+ +|.+++......+  .++++..++.|+.||+.||.|||++||||+|||+
T Consensus        93 ~~~~lv~e~~~~~~L~~~l~~~~~~~--~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dikp  152 (285)
T 3is5_A           93 HNMYIVMETCEGGELLERIVSAQARG--KALSEGYVAELMKQMMNALAYFHSQHVVHKDLKP  152 (285)
T ss_dssp             SEEEEEECCCSCCBHHHHHHHHHHHT--CCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSG
T ss_pred             CeEEEEEEeCCCCcHHHHHHhhhhcc--cCCCHHHHHHHHHHHHHHHHHHHhCCEEECCCCH
Confidence            999999999987 9999987543211  2389999999999999999999999999999986

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.82  E-value=9.6e-20  Score=176.15  Aligned_cols=130  Identities=24%  Similarity=0.300  Sum_probs=116.8

Q ss_pred             CceecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecCh----hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeE
Q 008813          409 NTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDY  484 (552)
Q Consensus       409 gdvi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk----~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~  484 (552)
                      +.+..++|++.+.||+|+||.||+|.+..+++.||||++....    .....+.+|+.+++.++|      |||++++++
T Consensus         6 g~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h------~~i~~~~~~   79 (276)
T 2h6d_A            6 GRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRH------PHIIKLYQV   79 (276)
T ss_dssp             -CCEETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCC------TTBCCEEEE
T ss_pred             CcceeccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCC------CCEeEEEEE
Confidence            4566789999999999999999999999999999999997542    234578899999999998      999999999


Q ss_pred             EEeCCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          485 FYHLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       485 F~~~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      +...+.+|||||++.+ +|.+++.....      +++..++.++.||+.||.|||++||+|.||++-
T Consensus        80 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~------~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~  140 (276)
T 2h6d_A           80 ISTPTDFFMVMEYVSGGELFDYICKHGR------VEEMEARRLFQQILSAVDYCHRHMVVHRDLKPE  140 (276)
T ss_dssp             EECSSEEEEEEECCCSCBHHHHHHHHCS------CCHHHHHHHHHHHHHHHHHHHHHCSSCCCCCGG
T ss_pred             EecCCeEEEEEeccCCCcHHHHHhccCC------CCHHHHHHHHHHHHHHHHHHHHCCCccCCCChh
Confidence            9999999999999976 99999987643      899999999999999999999999999999863

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.82  E-value=4.9e-20  Score=180.59  Aligned_cols=129  Identities=17%  Similarity=0.180  Sum_probs=114.1

Q ss_pred             ceecCceEEEEEeccCCceEEEEEE----ECCCCcEEEEEEEecC-hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeE
Q 008813          410 TVIAGRYYVTEYLGSAAFSKVFQAQ----DLHTGVDVCLKIIKND-KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDY  484 (552)
Q Consensus       410 dvi~~RY~Ile~LGkG~FG~VykA~----Dkktg~~VAVKIIk~s-k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~  484 (552)
                      ++..++|++++.||+|+||.||+|+    +..+++.||||+++.. ....+.+.+|+++|+.++|      |||++++++
T Consensus         6 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h------~~iv~~~~~   79 (295)
T 3ugc_A            6 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH------DNIVKYKGV   79 (295)
T ss_dssp             CCCGGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCC------TTBCCEEEE
T ss_pred             cCCHHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCC------CCEeeEEEE
Confidence            4566899999999999999999998    5678999999999764 3445678899999999998      999999999


Q ss_pred             EEeC--CEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          485 FYHL--EHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       485 F~~~--~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      +...  .+++|||||+.+ +|.+++......     +++..++.|+.||+.||.|||++||||+|||+
T Consensus        80 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~-----~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp  142 (295)
T 3ugc_A           80 CYSAGRRNLKLIMEYLPYGSLRDYLQKHKER-----IDHIKLLQYTSQICKGMEYLGTKRYIHRDLAT  142 (295)
T ss_dssp             ECHHHHTSCEEEEECCTTCBHHHHHHHCGGG-----CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSG
T ss_pred             EecCCCCceEEEEEeCCCCCHHHHHHhcccc-----cCHHHHHHHHHHHHHHHHHHhcCCcccCCCCH
Confidence            8654  569999999976 999999876532     89999999999999999999999999999996

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.82  E-value=7e-20  Score=184.41  Aligned_cols=128  Identities=20%  Similarity=0.195  Sum_probs=109.6

Q ss_pred             eecCceEEEEEeccCCceEEEEEEEC---CCCcEEEEEEEecCh-----hhHHHHHHHHHHHHHhcccCCCCCCCeeEeE
Q 008813          411 VIAGRYYVTEYLGSAAFSKVFQAQDL---HTGVDVCLKIIKNDK-----DFFDQSLDEIKLLKLVNKNDPADEHHILRLY  482 (552)
Q Consensus       411 vi~~RY~Ile~LGkG~FG~VykA~Dk---ktg~~VAVKIIk~sk-----~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~  482 (552)
                      +..++|++++.||+|+||.||+|++.   .+++.||||+++...     .....+.+|+.+|+.++|      |||++++
T Consensus        14 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h------p~iv~~~   87 (327)
T 3a62_A           14 IRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKH------PFIVDLI   87 (327)
T ss_dssp             CCGGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCC------TTBCCEE
T ss_pred             CCHHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCC------CCcccee
Confidence            45578999999999999999999985   689999999997642     233567789999999998      9999999


Q ss_pred             eEEEeCCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          483 DYFYHLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       483 d~F~~~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      +++...+++||||||+.+ +|.+++.....      +++..++.++.||+.||.|||++||||+|||+-
T Consensus        88 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~------~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~  150 (327)
T 3a62_A           88 YAFQTGGKLYLILEYLSGGELFMQLEREGI------FMEDTACFYLAEISMALGHLHQKGIIYRDLKPE  150 (327)
T ss_dssp             EEEECSSCEEEEEECCTTEEHHHHHHHHSS------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTT
T ss_pred             EEEEcCCEEEEEEeCCCCCcHHHHHHhCCC------CCHHHHHHHHHHHHHHHHHHHhCCEEcccCCHH
Confidence            999999999999999986 99999987653      899999999999999999999999999999973

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.82  E-value=4.1e-20  Score=195.34  Aligned_cols=130  Identities=21%  Similarity=0.310  Sum_probs=117.8

Q ss_pred             eCceecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC----hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEe
Q 008813          408 LNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND----KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYD  483 (552)
Q Consensus       408 ~gdvi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s----k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d  483 (552)
                      .+..+.+||++.+.||+|+||.||+|++..+++.||||++...    ......+.+|+.+|+.++|      |||+++++
T Consensus        20 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~h------pniv~~~~   93 (484)
T 3nyv_A           20 STAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDH------PNIMKLYE   93 (484)
T ss_dssp             CCCCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCC------TTBCCEEE
T ss_pred             CCCcccCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCC------CCCCcEEE
Confidence            4456778999999999999999999999999999999999753    2245678999999999998      99999999


Q ss_pred             EEEeCCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          484 YFYHLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       484 ~F~~~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ++...+++||||||+.+ +|.+++.....      +++..++.|+.||+.||.|||++||||+|||+
T Consensus        94 ~~~~~~~~~lv~e~~~~~~L~~~~~~~~~------~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp  154 (484)
T 3nyv_A           94 FFEDKGYFYLVGEVYTGGELFDEIISRKR------FSEVDAARIIRQVLSGITYMHKNKIVHRDLKP  154 (484)
T ss_dssp             EEECSSEEEEEECCCCSCBHHHHHHTCSC------CBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCG
T ss_pred             EEEeCCEEEEEEecCCCCCHHHHHHhcCC------CCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCH
Confidence            99999999999999976 99999886543      89999999999999999999999999999997

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.82  E-value=1.8e-19  Score=176.07  Aligned_cols=129  Identities=19%  Similarity=0.244  Sum_probs=114.9

Q ss_pred             eecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecCh----------hhHHHHHHHHHHHHHhcccCCCCCCCeeE
Q 008813          411 VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----------DFFDQSLDEIKLLKLVNKNDPADEHHILR  480 (552)
Q Consensus       411 vi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk----------~~~~~~lrEIkILk~L~hhd~~d~pnIVr  480 (552)
                      .+.++|++.+.||+|+||.||+|.+..+++.||||+++...          ...+.+.+|+.+++++.+|     |||++
T Consensus        14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h-----~~i~~   88 (298)
T 1phk_A           14 GFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGH-----PNIIQ   88 (298)
T ss_dssp             -CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTC-----TTBCC
T ss_pred             chhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCC-----CCEee
Confidence            35579999999999999999999999999999999997532          2346788999999999733     99999


Q ss_pred             eEeEEEeCCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          481 LYDYFYHLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       481 L~d~F~~~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      +++++...++++||||++.+ +|.++++....      +++..++.++.||+.||.|||++||+|++|++-
T Consensus        89 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~------~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~  153 (298)
T 1phk_A           89 LKDTYETNTFFFLVFDLMKKGELFDYLTEKVT------LSEKETRKIMRALLEVICALHKLNIVHRDLKPE  153 (298)
T ss_dssp             EEEEEECSSEEEEEEECCTTCBHHHHHHHHSS------CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGG
T ss_pred             eeeeeccCCeEEEEEeccCCCcHHHHHhccCC------CCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcc
Confidence            99999999999999999986 99999987543      899999999999999999999999999999873

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.82  E-value=6.5e-20  Score=193.15  Aligned_cols=128  Identities=16%  Similarity=0.093  Sum_probs=114.4

Q ss_pred             eecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecCh----hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEE
Q 008813          411 VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFY  486 (552)
Q Consensus       411 vi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk----~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~  486 (552)
                      +..++|++++.||+|+||+||+|+++.+++.||||++++..    .....+.+|+.+|..++|      +||++++++|.
T Consensus        58 ~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~h------p~Iv~l~~~~~  131 (412)
T 2vd5_A           58 LQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDR------RWITQLHFAFQ  131 (412)
T ss_dssp             CCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCT------TTBCCEEEEEE
T ss_pred             CChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCC------CCeeeEEEEEe
Confidence            34578999999999999999999999999999999997532    223457899999999988      99999999999


Q ss_pred             eCCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          487 HLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       487 ~~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ..+++||||||+.+ +|.++++.....     +++..++.|+.||+.||.|||++||||+|||+
T Consensus       132 ~~~~~~lVmE~~~gg~L~~~l~~~~~~-----l~~~~~~~~~~qi~~aL~~LH~~giiHrDLKp  190 (412)
T 2vd5_A          132 DENYLYLVMEYYVGGDLLTLLSKFGER-----IPAEMARFYLAEIVMAIDSVHRLGYVHRDIKP  190 (412)
T ss_dssp             CSSEEEEEECCCCSCBHHHHHHHHSSC-----CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSG
T ss_pred             eCCEEEEEEcCCCCCcHHHHHHhcCCC-----CCHHHHHHHHHHHHHHHHHHHHCCeeecccCH
Confidence            99999999999965 999999875422     89999999999999999999999999999997

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.82  E-value=5.2e-20  Score=187.88  Aligned_cols=125  Identities=18%  Similarity=0.214  Sum_probs=112.0

Q ss_pred             eecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCE
Q 008813          411 VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH  490 (552)
Q Consensus       411 vi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~h  490 (552)
                      .+.++|++++.||+|+||.||+|.++.+++.||||+++....   ...+|+.+|.++.+|     |||++++++|...++
T Consensus        19 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~---~~~~E~~~l~~~~~h-----p~iv~~~~~~~~~~~   90 (342)
T 2qr7_A           19 QFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR---DPTEEIEILLRYGQH-----PNIITLKDVYDDGKY   90 (342)
T ss_dssp             CHHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC---CCHHHHHHHHHHTTS-----TTBCCEEEEEECSSE
T ss_pred             CccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC---ChHHHHHHHHHhcCC-----CCcCeEEEEEEcCCE
Confidence            355789999999999999999999999999999999986532   345789999998533     999999999999999


Q ss_pred             EEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          491 LFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       491 LyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      +||||||+.+ +|.+++...+.      +++..++.|+.||+.||.|||++||||+|||+
T Consensus        91 ~~lv~E~~~gg~L~~~i~~~~~------~~~~~~~~~~~qi~~al~~lH~~givHrDlkp  144 (342)
T 2qr7_A           91 VYVVTELMKGGELLDKILRQKF------FSEREASAVLFTITKTVEYLHAQGVVHRDLKP  144 (342)
T ss_dssp             EEEEECCCCSCBHHHHHHTCTT------CCHHHHHHHHHHHHHHHHHHHHTTEECSCCCG
T ss_pred             EEEEEeCCCCCcHHHHHHHcCC------CCHHHHHHHHHHHHHHHHHHHHCCcEeccCCH
Confidence            9999999976 99999986543      89999999999999999999999999999997

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.82  E-value=7e-20  Score=194.48  Aligned_cols=128  Identities=21%  Similarity=0.268  Sum_probs=114.7

Q ss_pred             ceecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecCh---hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEE
Q 008813          410 TVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFY  486 (552)
Q Consensus       410 dvi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk---~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~  486 (552)
                      ..+.++|++++.||+|+||.||+|.++.+++.||+|++....   ...+.+.+|+.+|+.|+|      ||||++++++.
T Consensus         7 ~~~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~h------pnIv~l~~~~~   80 (444)
T 3soa_A            7 TRFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKH------PNIVRLHDSIS   80 (444)
T ss_dssp             CHHHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCB------TTBCCEEEEEE
T ss_pred             ccccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCC------cCCCeEEEEEE
Confidence            346678999999999999999999999999999999998642   234678899999999998      99999999999


Q ss_pred             eCCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          487 HLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       487 ~~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ..+++||||||+.+ +|.+++.....      +++..++.++.||+.||.|||++||||+|||+
T Consensus        81 ~~~~~~lv~E~~~gg~L~~~i~~~~~------~~e~~~~~i~~qil~aL~~lH~~givHrDlKp  138 (444)
T 3soa_A           81 EEGHHYLIFDLVTGGELFEDIVAREY------YSEADASHCIQQILEAVLHCHQMGVVHRNLKP  138 (444)
T ss_dssp             CSSEEEEEECCCBCCBHHHHHHHCSC------CCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSS
T ss_pred             ECCEEEEEEEeCCCCCHHHHHHHcCC------CCHHHHHHHHHHHHHHHHHHHHCCccccCCCH
Confidence            99999999999987 99999987643      89999999999999999999999999999997

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=99.82  E-value=5.8e-20  Score=189.01  Aligned_cols=127  Identities=20%  Similarity=0.220  Sum_probs=113.7

Q ss_pred             ecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecCh----hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEe
Q 008813          412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH  487 (552)
Q Consensus       412 i~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk----~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~  487 (552)
                      ..++|++++.||+|+||+||+|+++.+++.||||++++..    .....+.+|+.+|+.+.+|     |+|++++++|..
T Consensus        18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~h-----p~iv~l~~~~~~   92 (353)
T 2i0e_A           18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKP-----PFLTQLHSCFQT   92 (353)
T ss_dssp             -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCC-----TTBCCEEEEEEC
T ss_pred             chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCC-----CEEeeEEEEEEc
Confidence            3468999999999999999999999999999999998642    2346678999999888544     999999999999


Q ss_pred             CCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          488 LEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       488 ~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      .+++||||||+.+ +|.++++....      +++..++.|+.||+.||.|||++||||+|||+
T Consensus        93 ~~~~~lv~E~~~gg~L~~~l~~~~~------~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp  149 (353)
T 2i0e_A           93 MDRLYFVMEYVNGGDLMYHIQQVGR------FKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKL  149 (353)
T ss_dssp             SSEEEEEEECCCSCBHHHHHHHHSS------CCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCG
T ss_pred             CCEEEEEEeCCCCCcHHHHHHhcCC------CCHHHHHHHHHHHHHHHHHHHHCCEEeccCCH
Confidence            9999999999976 99999987653      89999999999999999999999999999997

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.82  E-value=5.5e-20  Score=195.04  Aligned_cols=127  Identities=20%  Similarity=0.286  Sum_probs=115.8

Q ss_pred             eecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC---hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEe
Q 008813          411 VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH  487 (552)
Q Consensus       411 vi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s---k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~  487 (552)
                      .+.+||++++.||+|+||.||+|.+..+++.||||++...   ......+.+|+.+|+.|+|      |||+++++++..
T Consensus        19 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h------pniv~~~~~~~~   92 (486)
T 3mwu_A           19 TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDH------PNIMKLFEILED   92 (486)
T ss_dssp             HHHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCC------TTBCCEEEEEEC
T ss_pred             ChhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCC------CCcCeEEEEEEc
Confidence            4668999999999999999999999999999999999753   2234678899999999998      999999999999


Q ss_pred             CCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          488 LEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       488 ~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ..++||||||+.+ +|.+++.....      +++..++.|+.||+.||.|||++||||+|||+
T Consensus        93 ~~~~~lv~e~~~~~~L~~~~~~~~~------~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp  149 (486)
T 3mwu_A           93 SSSFYIVGELYTGGELFDEIIKRKR------FSEHDAARIIKQVFSGITYMHKHNIVHRDLKP  149 (486)
T ss_dssp             SSEEEEEECCCCSCBHHHHHHHHSS------CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSG
T ss_pred             CCEEEEEEEcCCCCcHHHHHHhcCC------CCHHHHHHHHHHHHHHHHHHHHCCeEeccCch
Confidence            9999999999987 99999887643      89999999999999999999999999999997

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.82  E-value=5.5e-20  Score=195.72  Aligned_cols=128  Identities=23%  Similarity=0.332  Sum_probs=112.6

Q ss_pred             ceecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecCh---hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEE
Q 008813          410 TVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFY  486 (552)
Q Consensus       410 dvi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk---~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~  486 (552)
                      ..+.++|++++.||+|+||.||+|+++.+++.||||+++...   .....+.+|+.+|+.++|      ||||+++++|.
T Consensus        33 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h------pniv~~~~~~~  106 (494)
T 3lij_A           33 GHLSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDH------PNIMKLYDFFE  106 (494)
T ss_dssp             CCHHHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCC------TTBCCEEEEEE
T ss_pred             CchhcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCC------CCCCeEEEEEE
Confidence            346678999999999999999999999999999999998642   234678899999999998      99999999999


Q ss_pred             eCCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          487 HLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       487 ~~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ..+.+|||||||.+ +|.+++.....      +++..++.|+.||+.||.|||++||||+|||+
T Consensus       107 ~~~~~~lv~e~~~~g~L~~~~~~~~~------~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp  164 (494)
T 3lij_A          107 DKRNYYLVMECYKGGELFDEIIHRMK------FNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKP  164 (494)
T ss_dssp             CSSEEEEEEECCCSCBHHHHHHHHSS------CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSG
T ss_pred             eCCEEEEEEecCCCCcHHHHHHHcCC------CCHHHHHHHHHHHHHHHHHHHHCCceeccCCh
Confidence            99999999999987 99998887643      89999999999999999999999999999997

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.82  E-value=1.2e-19  Score=185.88  Aligned_cols=134  Identities=22%  Similarity=0.240  Sum_probs=117.9

Q ss_pred             CCcceeeCc---eecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC---hhhHHHHHHHHHHHHHhcccCCCCC
Q 008813          402 KDLPIILNT---VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADE  475 (552)
Q Consensus       402 ~~y~v~~gd---vi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s---k~~~~~~lrEIkILk~L~hhd~~d~  475 (552)
                      ..+++.+++   .+.++|++++.||+|+||.||+|.+..+++.||||++...   ......+.+|+.+++.++|      
T Consensus        10 ~~~~~~~~~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h------   83 (371)
T 2xrw_A           10 NFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH------   83 (371)
T ss_dssp             GEEEEEETTEEEEEETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCC------
T ss_pred             cceEeecCCcccchhhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCC------
Confidence            455666666   3568999999999999999999999999999999999763   3345678899999999998      


Q ss_pred             CCeeEeEeEEEeCC------EEEEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          476 HHILRLYDYFYHLE------HLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       476 pnIVrL~d~F~~~~------hLyIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      |||+++++++...+      ++||||||+.++|.++++..        +++..++.++.||+.||.|||++||||+|||+
T Consensus        84 pniv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~--------~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp  155 (371)
T 2xrw_A           84 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME--------LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKP  155 (371)
T ss_dssp             TTBCCEEEEECSCCSTTTCCEEEEEEECCSEEHHHHHHSC--------CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCG
T ss_pred             CCccceEEeeccccccccccceEEEEEcCCCCHHHHHhhc--------cCHHHHHHHHHHHHHHHHHHHHCCeecccCCH
Confidence            99999999998664      89999999999999988621        89999999999999999999999999999997

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.82  E-value=6.2e-20  Score=184.64  Aligned_cols=129  Identities=19%  Similarity=0.136  Sum_probs=114.3

Q ss_pred             ceecCceEEEEEeccCCceEEEEEEECCCCc---EEEEEEEecC--hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeE
Q 008813          410 TVIAGRYYVTEYLGSAAFSKVFQAQDLHTGV---DVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDY  484 (552)
Q Consensus       410 dvi~~RY~Ile~LGkG~FG~VykA~Dkktg~---~VAVKIIk~s--k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~  484 (552)
                      ++..++|++.+.||+|+||.||+|.+..+++   .||||+++..  ....+.+.+|+.+|+.++|      |||++++++
T Consensus        45 ~~~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h------~~iv~~~~~  118 (325)
T 3kul_A           45 EIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDH------PNIIRLEGV  118 (325)
T ss_dssp             BCCGGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCC------TTBCCEEEE
T ss_pred             ccChhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCC------CCCCcEEEE
Confidence            3556899999999999999999999986554   5999999863  3345678899999999998      999999999


Q ss_pred             EEeCCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          485 FYHLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       485 F~~~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      +...+.+||||||+.+ +|.++++....     .+++..++.|+.||+.||.|||++||||+|||+
T Consensus       119 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp  179 (325)
T 3kul_A          119 VTRGRLAMIVTEYMENGSLDTFLRTHDG-----QFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAA  179 (325)
T ss_dssp             ECGGGCCEEEEECCTTCBHHHHHHTTTT-----CSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSG
T ss_pred             EEeCCccEEEeeCCCCCcHHHHHHhccc-----CCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCc
Confidence            9999999999999977 99999976542     289999999999999999999999999999997

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.82  E-value=1.2e-19  Score=175.04  Aligned_cols=128  Identities=16%  Similarity=0.117  Sum_probs=114.6

Q ss_pred             eecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCE
Q 008813          411 VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH  490 (552)
Q Consensus       411 vi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~h  490 (552)
                      +..++|++++.||+|+||.||+|.+. ++..||||+++......+.+.+|+.+++.++|      |||+++++++...+.
T Consensus         5 l~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h------~~i~~~~~~~~~~~~   77 (268)
T 3sxs_A            5 LKREEITLLKELGSGQFGVVKLGKWK-GQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSH------PKLVKFYGVCSKEYP   77 (268)
T ss_dssp             CCGGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECBTTBCHHHHHHHHHHHHHCCC------TTBCCEEEEECSSSS
T ss_pred             echhheeeeeeeccCCCceEEEEEec-CceeEEEEEeccCCCcHHHHHHHHHHHHhCCC------CCEeeEEEEEccCCc
Confidence            34578999999999999999999876 56789999998765555778999999999998      999999999999999


Q ss_pred             EEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          491 LFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       491 LyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      ++|||||+.+ +|.++++....     ++++..++.|+.||+.||.|||++||+|+|||+-
T Consensus        78 ~~lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~  133 (268)
T 3sxs_A           78 IYIVTEYISNGCLLNYLRSHGK-----GLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAAR  133 (268)
T ss_dssp             EEEEEECCTTCBHHHHHHHHGG-----GCCHHHHHHHHHHHHHHHHHHHHTTEEESSCSGG
T ss_pred             eEEEEEccCCCcHHHHHHHcCC-----CCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCcc
Confidence            9999999976 89999987643     2899999999999999999999999999999973

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.82  E-value=1.1e-19  Score=175.90  Aligned_cols=126  Identities=15%  Similarity=0.152  Sum_probs=113.4

Q ss_pred             cCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEEE
Q 008813          413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLF  492 (552)
Q Consensus       413 ~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hLy  492 (552)
                      ..+|++++.||+|+||.||+|.+. +++.||||+++......+.+.+|++++++++|      |||+++++++...+.+|
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h------~~i~~~~~~~~~~~~~~   81 (269)
T 4hcu_A            9 PSELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAMSEEDFIEEAEVMMKLSH------PKLVQLYGVCLEQAPIC   81 (269)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEET-TTEEEEEEEECTTSBCHHHHHHHHHHHHTCCC------TTBCCEEEEECSSSSEE
T ss_pred             hhhceeeheecCCCccEEEEEEec-CCCeEEEEEecccccCHHHHHHHHHHHHhCCC------CCEeeEEEEEecCCceE
Confidence            468999999999999999999987 46779999998765555778999999999998      99999999999999999


Q ss_pred             EEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          493 IVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       493 IVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      |||||+.+ +|.++++....     ++++..++.|+.||+.||.|||++||+|+|||+-
T Consensus        82 lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~  135 (269)
T 4hcu_A           82 LVFEFMEHGCLSDYLRTQRG-----LFAAETLLGMCLDVCEGMAYLEEACVIHRDLAAR  135 (269)
T ss_dssp             EEEECCTTCBHHHHHHTTTT-----CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGG
T ss_pred             EEEEeCCCCcHHHHHHhcCc-----ccCHHHHHHHHHHHHHHHHHHHhCCeecCCcchh
Confidence            99999987 99999976543     2899999999999999999999999999999973

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.82  E-value=7.5e-20  Score=177.67  Aligned_cols=128  Identities=21%  Similarity=0.227  Sum_probs=114.5

Q ss_pred             ecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEe----
Q 008813          412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH----  487 (552)
Q Consensus       412 i~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~----  487 (552)
                      +.++|++++.||+|+||.||+|++..+++.||||+++......+.+.+|+.+++.++|      |||+++++++..    
T Consensus         4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h------~~i~~~~~~~~~~~~~   77 (303)
T 1zy4_A            4 YASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNH------QYVVRYYAAWLERRNF   77 (303)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEEHHHHHHHHHHHHHHTTCCC------TTBCCEEEEEEECCCC
T ss_pred             ccccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEeccHHHHHHHHHHHHHHHhcCc------hHHHHHHHHHHhhcch
Confidence            3468999999999999999999999999999999998766666788999999999998      999999999865    


Q ss_pred             ---------CCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          488 ---------LEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       488 ---------~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                               .+.+||||||+.+ +|.+++.....     .+++..++.++.||+.||.|||++||+|+||++-
T Consensus        78 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dlkp~  145 (303)
T 1zy4_A           78 VKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENL-----NQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPM  145 (303)
T ss_dssp             CC------CEEEEEEEEECCCSCBHHHHHHHSCG-----GGCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGG
T ss_pred             hhhhcccccCCceEEEEecCCCCCHHHhhhcccc-----ccchHHHHHHHHHHHHHHHHHHhCCeecccCCHH
Confidence                     4679999999976 99999986542     2789999999999999999999999999999863

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.82  E-value=7.2e-20  Score=189.26  Aligned_cols=132  Identities=15%  Similarity=0.177  Sum_probs=116.2

Q ss_pred             CceecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecCh--hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEE
Q 008813          409 NTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFY  486 (552)
Q Consensus       409 gdvi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk--~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~  486 (552)
                      +.++.++|++.+.||+|+||.||+|++..+++.||||+++...  ...+.+.+|+++|+.++|      |||+++++++.
T Consensus         4 ~~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h------pnIv~~~~~~~   77 (396)
T 4eut_A            4 QSTSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNH------KNIVKLFAIEE   77 (396)
T ss_dssp             EECSSEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCC------TTBCCEEEEEE
T ss_pred             CCCCCCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCC------CCCCeEEEeec
Confidence            3456789999999999999999999999999999999998642  234667899999999998      99999999998


Q ss_pred             eCC--EEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          487 HLE--HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       487 ~~~--hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ...  ++||||||+.+ +|.++++......   .+++..++.|+.||+.||.|||++||||+|||+
T Consensus        78 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~---~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp  140 (396)
T 4eut_A           78 ETTTRHKVLIMEFCPCGSLYTVLEEPSNAY---GLPESEFLIVLRDVVGGMNHLRENGIVHRNIKP  140 (396)
T ss_dssp             CTTTCCEEEEECCCTTEEHHHHTTSGGGTT---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCG
T ss_pred             cCCCCeeEEEEecCCCCCHHHHHHhhhccc---CCCHHHHHHHHHHHHHHHHHHHHCCEEECCcCH
Confidence            765  89999999976 9999998654322   289999999999999999999999999999997

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.82  E-value=1.4e-19  Score=177.13  Aligned_cols=132  Identities=21%  Similarity=0.264  Sum_probs=115.0

Q ss_pred             eCceecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC-hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEE
Q 008813          408 LNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND-KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFY  486 (552)
Q Consensus       408 ~gdvi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s-k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~  486 (552)
                      .+..+.++|++++.||+|+||.||+|.+..+++.||+|++... ....+.+.+|+.+++.++|      |||+++++++.
T Consensus        13 ~~~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h------~~i~~~~~~~~   86 (302)
T 2j7t_A           13 RDLDPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDH------PYIVKLLGAYY   86 (302)
T ss_dssp             SSSCGGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCC------TTBCCEEEEEE
T ss_pred             cccCCccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCC------CCEeeeeeeee
Confidence            3345668999999999999999999999999999999999754 2345678899999999998      99999999999


Q ss_pred             eCCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          487 HLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       487 ~~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      ..+.+++||||+.+ +|.+++......     +++..++.++.||+.||.|||++||+|+||++-
T Consensus        87 ~~~~~~lv~e~~~~~~l~~~~~~~~~~-----~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~  146 (302)
T 2j7t_A           87 HDGKLWIMIEFCPGGAVDAIMLELDRG-----LTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAG  146 (302)
T ss_dssp             CC-CEEEEEECCTTEEHHHHHHHHTSC-----CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGG
T ss_pred             eCCeEEEEEEeCCCCcHHHHHHhhccC-----CCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHH
Confidence            99999999999987 899988765432     899999999999999999999999999999973

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.82  E-value=1.1e-19  Score=176.75  Aligned_cols=128  Identities=16%  Similarity=0.167  Sum_probs=111.5

Q ss_pred             eecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCE
Q 008813          411 VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH  490 (552)
Q Consensus       411 vi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~h  490 (552)
                      +..++|++++.||+|+||.||+|.+. ++..||||+++......+.+.+|+++++.++|      +||+++++++...+.
T Consensus        21 ~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h------~~i~~~~~~~~~~~~   93 (283)
T 3gen_A           21 IDPKDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSH------EKLVQLYGVCTKQRP   93 (283)
T ss_dssp             CCGGGEEEEEECC---CEEEEEEEET-TTEEEEEEEECTTSBCHHHHHHHHHHHHTCCC------TTBCCEEEEECSSSS
T ss_pred             CCHHHHHhHhhcCCCCCceEEEEEEc-CCCeEEEEEecCCCCCHHHHHHHHHHHhcCCC------CCEeeEEEEEecCCC
Confidence            44578999999999999999999876 57789999998765455778999999999998      999999999999999


Q ss_pred             EEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          491 LFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       491 LyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      +||||||+.+ +|.++++.....     +++..++.|+.||+.||.|||++||+|+|||+-
T Consensus        94 ~~lv~e~~~~~~L~~~l~~~~~~-----~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~  149 (283)
T 3gen_A           94 IFIITEYMANGCLLNYLREMRHR-----FQTQQLLEMCKDVCEAMEYLESKQFLHRDLAAR  149 (283)
T ss_dssp             EEEEECCCTTCBHHHHHHCGGGC-----CCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGG
T ss_pred             eEEEEeccCCCcHHHHHHHhccC-----CCHHHHHHHHHHHHHHHHHHHHCCccCCCCccc
Confidence            9999999976 999999874432     899999999999999999999999999999973

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...

Probab=99.82  E-value=1.1e-19  Score=177.73  Aligned_cols=127  Identities=26%  Similarity=0.311  Sum_probs=112.7

Q ss_pred             CceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecCh---hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCE
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH  490 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk---~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~h  490 (552)
                      ++|++++.||+|+||.||+|++..+++.||||+++...   .....+.+|+.+++.++|      |||+++++++...++
T Consensus         3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h------~~i~~~~~~~~~~~~   76 (299)
T 2r3i_A            3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH------PNIVKLLDVIHTENK   76 (299)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCC------TTBCCEEEEEEETTE
T ss_pred             chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCC------CCeeeEEEEEecCCc
Confidence            58999999999999999999999999999999987542   233678899999999998      999999999999999


Q ss_pred             EEEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          491 LFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       491 LyIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      +|||||++.++|.+++.......    +++..++.++.||+.||.|||++||+|+|||+-
T Consensus        77 ~~lv~e~~~~~L~~~~~~~~~~~----~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~  132 (299)
T 2r3i_A           77 LYLVFEFLHQDLKKFMDASALTG----IPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQ  132 (299)
T ss_dssp             EEEEEECCSEEHHHHHHHTTTTC----CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGG
T ss_pred             eEEEEEcccCCHHHHHHhhhccC----CCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHH
Confidence            99999999999999998765433    899999999999999999999999999999973

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.82  E-value=1.8e-19  Score=182.02  Aligned_cols=127  Identities=20%  Similarity=0.210  Sum_probs=112.7

Q ss_pred             ecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC---hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeC
Q 008813          412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL  488 (552)
Q Consensus       412 i~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s---k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~  488 (552)
                      ...+|++++.||+|+||.||+|.+. +++.||||++...   ....+.+.+|+.+|+.|+|+    ++||+++++++...
T Consensus         7 ~~~~y~i~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~----~~~iv~~~~~~~~~   81 (343)
T 3dbq_A            7 KGRIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQH----SDKIIRLYDYEITD   81 (343)
T ss_dssp             SSCEEEEEEEESCCSSEEEEEEECT-TSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTT----CTTBCCEEEEEECS
T ss_pred             ecCEEEEEEEEecCCCeEEEEEEeC-CCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhc----CCceEEEeeeEeeC
Confidence            4568999999999999999999884 6889999999754   33446788999999999862    27999999999999


Q ss_pred             CEEEEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          489 EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       489 ~hLyIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      +++|||||+.+++|.+++.....      +++..++.|+.||+.||.|||++||||+|||+
T Consensus        82 ~~~~lv~e~~~~~L~~~l~~~~~------~~~~~~~~i~~qi~~al~~lH~~~iiHrDikp  136 (343)
T 3dbq_A           82 QYIYMVMECGNIDLNSWLKKKKS------IDPWERKSYWKNMLEAVHTIHQHGIVHSDLKP  136 (343)
T ss_dssp             SEEEEEECCCSEEHHHHHHHSCC------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCG
T ss_pred             CEEEEEEeCCCCCHHHHHHhcCC------CCHHHHHHHHHHHHHHHHHHHhCCeecCCCCc
Confidence            99999999777799999987543      89999999999999999999999999999997

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.82  E-value=1.8e-19  Score=176.48  Aligned_cols=133  Identities=16%  Similarity=0.128  Sum_probs=113.8

Q ss_pred             eeeCceecCceEEEEEeccCCceEEEEEE----ECCCCcEEEEEEEecCh--hhHHHHHHHHHHHHHhcccCCCCCCCee
Q 008813          406 IILNTVIAGRYYVTEYLGSAAFSKVFQAQ----DLHTGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHIL  479 (552)
Q Consensus       406 v~~gdvi~~RY~Ile~LGkG~FG~VykA~----Dkktg~~VAVKIIk~sk--~~~~~~lrEIkILk~L~hhd~~d~pnIV  479 (552)
                      +..+.....+|++++.||+|+||.||+|+    +..+++.||||+++...  .....+.+|+.+|+.++|      +||+
T Consensus        13 ~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h------~~i~   86 (302)
T 4e5w_A           13 VDPTHFEKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYH------ENIV   86 (302)
T ss_dssp             CCTTBCCGGGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCC------TTBC
T ss_pred             cChhhhhhhhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCC------CCee
Confidence            33444556789999999999999999998    56789999999997542  234678899999999998      9999


Q ss_pred             EeEeEEEeC--CEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          480 RLYDYFYHL--EHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       480 rL~d~F~~~--~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ++++++...  ..+++||||+.+ +|.+++......     +++..++.|+.||+.||.|||++||+|+|||+
T Consensus        87 ~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~-----~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp  154 (302)
T 4e5w_A           87 KYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNK-----INLKQQLKYAVQICKGMDYLGSRQYVHRDLAA  154 (302)
T ss_dssp             CEEEEEEC---CCEEEEEECCTTCBHHHHHHHHTTT-----CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSG
T ss_pred             eeeeEEecCCCceEEEEEEeCCCCcHHHHHHhcccc-----CCHHHHHHHHHHHHHHHHHhhcCCcccCCCch
Confidence            999999877  679999999977 999999765432     89999999999999999999999999999997

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.82  E-value=8.1e-20  Score=193.99  Aligned_cols=127  Identities=12%  Similarity=0.050  Sum_probs=113.4

Q ss_pred             ecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChh----hHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEe
Q 008813          412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD----FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH  487 (552)
Q Consensus       412 i~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~----~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~  487 (552)
                      ..++|+++++||+|+||+||+|+++.+++.||||++++...    ....+.+|+.++..++|      |||++++++|..
T Consensus        72 ~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~h------p~Iv~l~~~~~~  145 (437)
T 4aw2_A           72 HREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDS------KWITTLHYAFQD  145 (437)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCT------TTBCCEEEEEEC
T ss_pred             ChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCC------CCEEEEEEEEee
Confidence            34789999999999999999999999999999999976321    22347899999999988      999999999999


Q ss_pred             CCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          488 LEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       488 ~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      .+++|||||||.+ +|.+++.....     .+++..++.|+.||+.||.|||++||||+|||+
T Consensus       146 ~~~~~lV~Ey~~gg~L~~~l~~~~~-----~l~e~~~~~~~~qi~~aL~~LH~~giiHrDLKp  203 (437)
T 4aw2_A          146 DNNLYLVMDYYVGGDLLTLLSKFED-----RLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKP  203 (437)
T ss_dssp             SSEEEEEECCCTTCBHHHHHHTTTT-----CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSG
T ss_pred             CCEEEEEEecCCCCcHHHHHHHccC-----CCCHHHHHHHHHHHHHHHHHHHhCCeEecccCH
Confidence            9999999999966 99999987432     289999999999999999999999999999997

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.81  E-value=1.5e-19  Score=181.97  Aligned_cols=128  Identities=21%  Similarity=0.226  Sum_probs=115.9

Q ss_pred             eecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC----hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEE
Q 008813          411 VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND----KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFY  486 (552)
Q Consensus       411 vi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s----k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~  486 (552)
                      ....+|.+.+.||+|+||.||+|.+..+++.||+|++...    ....+.+.+|+.+++.++|      +||+++++++.
T Consensus        38 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h------~~iv~~~~~~~  111 (335)
T 2owb_A           38 RSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAH------QHVVGFHGFFE  111 (335)
T ss_dssp             TTTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCC------TTBCCEEEEEE
T ss_pred             ccCCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCC------CCCCeEEEEEe
Confidence            3457899999999999999999999999999999999754    2345678899999999998      99999999999


Q ss_pred             eCCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          487 HLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       487 ~~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      ..+.+||||||+.+ +|.++++....      +++..++.|+.||+.||.|||++||+|+||++-
T Consensus       112 ~~~~~~lv~e~~~~~~L~~~~~~~~~------l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~  170 (335)
T 2owb_A          112 DNDFVFVVLELCRRRSLLELHKRRKA------LTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLG  170 (335)
T ss_dssp             CSSEEEEEECCCTTCBHHHHHHHHCS------CCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGG
T ss_pred             cCCeEEEEEecCCCCCHHHHHhccCC------CCHHHHHHHHHHHHHHHHHHHHCCCEecCCCch
Confidence            99999999999986 99999887643      899999999999999999999999999999963

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.81  E-value=9.2e-20  Score=185.70  Aligned_cols=127  Identities=17%  Similarity=0.147  Sum_probs=109.1

Q ss_pred             ceecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCC
Q 008813          410 TVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE  489 (552)
Q Consensus       410 dvi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~  489 (552)
                      +.+.++|++.+.||+|+||.||+|++..+++.||||+++... ..+.+.+|+.+|+.++|      |||+++++++...+
T Consensus        49 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~E~~~l~~l~h------~niv~~~~~~~~~~  121 (349)
T 2w4o_A           49 DALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV-DKKIVRTEIGVLLRLSH------PNIIKLKEIFETPT  121 (349)
T ss_dssp             SCGGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC-----------CHHHHHCCC------TTBCCEEEEEECSS
T ss_pred             ccccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch-hHHHHHHHHHHHHhCCC------CCCcceeeeEecCC
Confidence            346678999999999999999999999999999999998653 23567889999999998      99999999999999


Q ss_pred             EEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          490 HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       490 hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      .++|||||+.+ +|.+++.....      +++..++.++.||+.||.|||++||||+|||+
T Consensus       122 ~~~lv~e~~~~~~L~~~l~~~~~------~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp  176 (349)
T 2w4o_A          122 EISLVLELVTGGELFDRIVEKGY------YSERDAADAVKQILEAVAYLHENGIVHRDLKP  176 (349)
T ss_dssp             EEEEEECCCCSCBHHHHHTTCSS------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCG
T ss_pred             eEEEEEEeCCCCCHHHHHHhcCC------CCHHHHHHHHHHHHHHHHHHHHCCeEecCCCc
Confidence            99999999976 99999876543      89999999999999999999999999999997

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.81  E-value=3.8e-20  Score=182.03  Aligned_cols=127  Identities=17%  Similarity=0.239  Sum_probs=107.3

Q ss_pred             eecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChh---------------------------hHHHHHHHHHH
Q 008813          411 VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD---------------------------FFDQSLDEIKL  463 (552)
Q Consensus       411 vi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~---------------------------~~~~~lrEIkI  463 (552)
                      +..++|++.+.||+|+||.||+|++..+++.||||++.....                           ..+.+.+|+++
T Consensus        10 ~~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~   89 (298)
T 2zv2_A           10 VQLNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAI   89 (298)
T ss_dssp             CEETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHH
T ss_pred             eeecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHH
Confidence            345789999999999999999999999999999999976421                           12457899999


Q ss_pred             HHHhcccCCCCCCCeeEeEeEEEe--CCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhC
Q 008813          464 LKLVNKNDPADEHHILRLYDYFYH--LEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLL  540 (552)
Q Consensus       464 Lk~L~hhd~~d~pnIVrL~d~F~~--~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~  540 (552)
                      |+.++|      |||+++++++..  .+++||||||+.+ +|.+++...       ++++..++.++.||+.||.|||++
T Consensus        90 l~~l~h------~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~-------~~~~~~~~~~~~qi~~~l~~lH~~  156 (298)
T 2zv2_A           90 LKKLDH------PNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLK-------PLSEDQARFYFQDLIKGIEYLHYQ  156 (298)
T ss_dssp             HHTCCC------TTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCSS-------CCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHhCCC------CCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhcC-------CCCHHHHHHHHHHHHHHHHHHHHC
Confidence            999998      999999999986  5789999999986 777654321       289999999999999999999999


Q ss_pred             CCeeeecccc
Q 008813          541 LVIYFILFCF  550 (552)
Q Consensus       541 gIIH~~L~~~  550 (552)
                      ||||+|||+-
T Consensus       157 ~ivH~Dlkp~  166 (298)
T 2zv2_A          157 KIIHRDIKPS  166 (298)
T ss_dssp             TEECCCCCGG
T ss_pred             CeeccCCCHH
Confidence            9999999973

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=99.81  E-value=1.4e-19  Score=184.17  Aligned_cols=132  Identities=23%  Similarity=0.302  Sum_probs=115.6

Q ss_pred             ceeeCceec--CceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC--hhhHHHHHHHHHHHHHhcccCCCCCCCeeE
Q 008813          405 PIILNTVIA--GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILR  480 (552)
Q Consensus       405 ~v~~gdvi~--~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s--k~~~~~~lrEIkILk~L~hhd~~d~pnIVr  480 (552)
                      .+..++++.  +||++++.||+|+||.||+|.+..+++.||||++...  ....+.+.+|+++|+.++|      |||++
T Consensus        16 ~~~~g~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h------~niv~   89 (364)
T 3qyz_A           16 EMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRH------ENIIG   89 (364)
T ss_dssp             CBCC-CBCCCTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCC------TTBCC
T ss_pred             EEEccEeccccccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCC------CCCcc
Confidence            344455443  7999999999999999999999999999999999753  3345678899999999998      99999


Q ss_pred             eEeEEEeC-----CEEEEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          481 LYDYFYHL-----EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       481 L~d~F~~~-----~hLyIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      +++++...     ..+|||||+++++|.++++...       +++..++.|+.||+.||.|||++||||+|||+
T Consensus        90 ~~~~~~~~~~~~~~~~~iv~e~~~~~L~~~l~~~~-------~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp  156 (364)
T 3qyz_A           90 INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-------LSNDHICYFLYQILRGLKYIHSANVLHRDLKP  156 (364)
T ss_dssp             CCEEECCSSTTTCCCEEEEEECCSEEHHHHHHHCC-------CCHHHHHHHHHHHHHHHHHHHHTTEECCCCCG
T ss_pred             ceeEEecCCccccceEEEEEcccCcCHHHHHHhCC-------CCHHHHHHHHHHHHHHHHHHHHCCeecCCCCh
Confidence            99999765     4799999999999999997643       89999999999999999999999999999996

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.81  E-value=2.6e-19  Score=177.50  Aligned_cols=131  Identities=19%  Similarity=0.246  Sum_probs=116.4

Q ss_pred             eecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEe---
Q 008813          411 VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH---  487 (552)
Q Consensus       411 vi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~---  487 (552)
                      ...++|++++.||+|+||.||+|.+..+++.||||++.........+.+|+.+++.+.+|     |||+++++++..   
T Consensus        21 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~h-----~~i~~~~~~~~~~~~   95 (326)
T 2x7f_A           21 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHH-----RNIATYYGAFIKKNP   95 (326)
T ss_dssp             CCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSSTTHHHHHHHHHHHHHCCS-----TTBCCEEEEEEECC-
T ss_pred             CCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcccHHHHHHHHHHHHhccCC-----CCeeeeeeEEeeccC
Confidence            356899999999999999999999999999999999987655567889999999999543     999999999987   


Q ss_pred             ---CCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          488 ---LEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       488 ---~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                         .+.+||||||+.+ +|.++++.....    .+++..++.|+.||+.||.|||++||+|+||++-
T Consensus        96 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~----~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~  158 (326)
T 2x7f_A           96 PGMDDQLWLVMEFCGAGSVTDLIKNTKGN----TLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQ  158 (326)
T ss_dssp             -CCCCEEEEEEECCTTEEHHHHHHHSGGG----CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGG
T ss_pred             ccccceEEEEEEcCCCCcHHHHHHhcccC----CCCHHHHHHHHHHHHHHHHHHHHCCccccCCcHH
Confidence               5689999999987 999999875432    2899999999999999999999999999999863

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.81  E-value=1.6e-19  Score=178.01  Aligned_cols=128  Identities=23%  Similarity=0.242  Sum_probs=114.0

Q ss_pred             eecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChh-hHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCC
Q 008813          411 VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD-FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE  489 (552)
Q Consensus       411 vi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~-~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~  489 (552)
                      .+.++|.+.+.||+|+||.||+|++..+++.||||+++.... ....+.+|+.+++.++|      |||+++++++...+
T Consensus         6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h------~~i~~~~~~~~~~~   79 (304)
T 2jam_A            6 NIRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKH------ENIVTLEDIYESTT   79 (304)
T ss_dssp             CHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCC------TTBCCEEEEEECSS
T ss_pred             chhccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCC------CCeeehhhhcccCC
Confidence            456789999999999999999999999999999999986532 23567899999999998      99999999999999


Q ss_pred             EEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          490 HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       490 hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      ++|+||||+.+ +|.+++.....      +++..++.++.||+.||.|||++||+|+||++-
T Consensus        80 ~~~lv~e~~~~~~L~~~l~~~~~------~~~~~~~~~~~qi~~~l~~lH~~~i~H~dikp~  135 (304)
T 2jam_A           80 HYYLVMQLVSGGELFDRILERGV------YTEKDASLVIQQVLSAVKYLHENGIVHRDLKPE  135 (304)
T ss_dssp             EEEEEECCCCSCBHHHHHHHHSC------CCHHHHHHHHHHHHHHHHHHHHTTCCCCSCCGG
T ss_pred             EEEEEEEcCCCccHHHHHHHcCC------CCHHHHHHHHHHHHHHHHHHHHCCccccCCCHH
Confidence            99999999976 99999987643      899999999999999999999999999999973

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.81  E-value=1.8e-19  Score=175.16  Aligned_cols=126  Identities=20%  Similarity=0.241  Sum_probs=114.4

Q ss_pred             ecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecCh----hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEe
Q 008813          412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH  487 (552)
Q Consensus       412 i~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk----~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~  487 (552)
                      ..++|++++.||+|+||.||+|.+..+++.||||++....    .....+.+|+.+++.++|      |||+++++++..
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h------~~i~~~~~~~~~   80 (279)
T 3fdn_A            7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH------PNILRLYGYFHD   80 (279)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCC------TTBCCEEEEEEC
T ss_pred             ecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCC------CCCcchhheEec
Confidence            4478999999999999999999999999999999997532    234568899999999998      999999999999


Q ss_pred             CCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          488 LEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       488 ~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      .+.++|||||+.+ +|.+++.....      +++..++.|+.||+.||.|||++||||+||++
T Consensus        81 ~~~~~lv~e~~~~~~l~~~l~~~~~------~~~~~~~~~~~qi~~~l~~LH~~~i~H~dlkp  137 (279)
T 3fdn_A           81 ATRVYLILEYAPLGTVYRELQKLSK------FDEQRTATYITELANALSYCHSKRVIHRDIKP  137 (279)
T ss_dssp             SSEEEEEECCCTTEEHHHHHHHHSS------CCHHHHHHHHHHHHHHHHHHHTTTCEECCCCG
T ss_pred             CCEEEEEEecCCCCcHHHHHHhcCC------CCHHHHHHHHHHHHHHHHHHHhCCEecccCCh
Confidence            9999999999987 99999987643      89999999999999999999999999999996

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.81  E-value=3.1e-19  Score=176.24  Aligned_cols=133  Identities=22%  Similarity=0.223  Sum_probs=112.7

Q ss_pred             CcceeeCceecCceEEE-EEeccCCceEEEEEEECCCCcEEEEEEEecChhhHHHHHHHHHHHHHhcccCCCCCCCeeEe
Q 008813          403 DLPIILNTVIAGRYYVT-EYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRL  481 (552)
Q Consensus       403 ~y~v~~gdvi~~RY~Il-e~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd~~d~pnIVrL  481 (552)
                      .+.+..+.++ ++|.++ +.||+|+||.||+|.+..+++.||||+++..    ....+|+.++.++.+|     |||+++
T Consensus         7 ~~~~~~~~~~-~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~e~~~~~~~~~h-----~~i~~~   76 (299)
T 3m2w_A            7 GLQIKKNAII-DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC----PKARREVELHWRASQC-----PHIVRI   76 (299)
T ss_dssp             CCCCBCSCGG-GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS----HHHHHHHHHHHHHTTS-----TTBCCE
T ss_pred             cccCcccccc-cchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc----HHHHHHHHHHHHhccC-----CCchhH
Confidence            3455555544 567776 7899999999999999999999999999854    3567899988555443     999999


Q ss_pred             EeEEEe----CCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          482 YDYFYH----LEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       482 ~d~F~~----~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ++++..    ..++||||||+.+ +|.++++.....    ++++..++.|+.||+.||.|||++||||+|||+
T Consensus        77 ~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~----~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp  145 (299)
T 3m2w_A           77 VDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQ----AFTEREASEIMKSIGEAIQYLHSINIAHRDVKP  145 (299)
T ss_dssp             EEEEEEEETTEEEEEEEECCCCSCBHHHHHHHCTTC----CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSG
T ss_pred             HhhhhhhcCCCceEEEEEeecCCCcHHHHHHhccCC----CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCH
Confidence            999987    6789999999987 999999976532    289999999999999999999999999999997

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.81  E-value=1.3e-19  Score=182.49  Aligned_cols=123  Identities=24%  Similarity=0.265  Sum_probs=111.1

Q ss_pred             CceEEE---EEeccCCceEEEEEEECCCCcEEEEEEEecChhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCE
Q 008813          414 GRYYVT---EYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH  490 (552)
Q Consensus       414 ~RY~Il---e~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~h  490 (552)
                      .+|.+.   +.||+|+||.||+|.+..+++.||||++...  ......+|+.+++.+.+|     |||+++++++....+
T Consensus         8 ~~y~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~e~~~l~~l~~h-----~niv~~~~~~~~~~~   80 (325)
T 3kn6_A            8 QHYDLDLKDKPLGEGSFSICRKCVHKKSNQAFAVKIISKR--MEANTQKEITALKLCEGH-----PNIVKLHEVFHDQLH   80 (325)
T ss_dssp             HHEEECTTSCCSEEETTEEEEEEEETTTCCEEEEEEEEGG--GHHHHHHHHHHHHHTTTC-----TTBCCEEEEEECSSE
T ss_pred             hccccccCCCccccCCCeEEEEEEECCCCCEEEEEEEChh--hhhhHHHHHHHHHHhcCC-----CCeeEEEEEEEcCCE
Confidence            567765   6899999999999999999999999999754  346778999999999843     999999999999999


Q ss_pred             EEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          491 LFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       491 LyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      +||||||+.+ +|.++++....      +++..++.|+.||+.||.|||++||||+|||+
T Consensus        81 ~~lv~e~~~~~~L~~~l~~~~~------~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp  134 (325)
T 3kn6_A           81 TFLVMELLNGGELFERIKKKKH------FSETEASYIMRKLVSAVSHMHDVGVVHRDLKP  134 (325)
T ss_dssp             EEEEECCCCSCBHHHHHHHCSC------CCHHHHHHHHHHHHHHHHHHHHTTEECCCCCG
T ss_pred             EEEEEEccCCCcHHHHHHhcCC------CCHHHHHHHHHHHHHHHHHHHHCCCeecCCCH
Confidence            9999999987 99999987543      99999999999999999999999999999997

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=99.81  E-value=4.2e-20  Score=185.14  Aligned_cols=125  Identities=21%  Similarity=0.206  Sum_probs=111.2

Q ss_pred             CceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChh--hHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEE
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD--FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL  491 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~--~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hL  491 (552)
                      ++|++++.||+|+||.||+|.+..+++.||||+++....  ....+.+|+++|+.++|      |||+++++++...+.+
T Consensus         2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h------~~iv~~~~~~~~~~~~   75 (324)
T 3mtl_A            2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKH------ANIVTLHDIIHTEKSL   75 (324)
T ss_dssp             CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCC------TTBCCEEEEEECSSCE
T ss_pred             CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCC------CCCCeeeeEEeeCCEE
Confidence            589999999999999999999999999999999975422  11245579999999998      9999999999999999


Q ss_pred             EEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          492 FIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       492 yIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ||||||+.++|.+++.....     .+++..++.|+.||+.||.|||++||||+|||+
T Consensus        76 ~lv~e~~~~~l~~~~~~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dikp  128 (324)
T 3mtl_A           76 TLVFEYLDKDLKQYLDDCGN-----IINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKP  128 (324)
T ss_dssp             EEEEECCSEEHHHHHHHTTT-----CCCHHHHHHHHHHHHHHHHHHHHTTEEESSCCG
T ss_pred             EEEecccccCHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHHCCccCCCcCH
Confidence            99999999999999987643     289999999999999999999999999999997

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.81  E-value=1.5e-19  Score=182.62  Aligned_cols=130  Identities=17%  Similarity=0.158  Sum_probs=118.4

Q ss_pred             eCceecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC--hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEE
Q 008813          408 LNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYF  485 (552)
Q Consensus       408 ~gdvi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s--k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F  485 (552)
                      ++++..++|++++.||+|+||.||+|.+..+++.||+|+++..  ....+.+.+|+.+|+.++|      |||+++++++
T Consensus        27 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h------~~iv~~~~~~  100 (360)
T 3eqc_A           27 VGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNS------PYIVGFYGAF  100 (360)
T ss_dssp             CCCCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCC------TTBCCEEEEE
T ss_pred             ccccccccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCC------CCEEEEeEEE
Confidence            4456778999999999999999999999999999999999864  4445778999999999988      9999999999


Q ss_pred             EeCCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhC-CCeeeeccc
Q 008813          486 YHLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLL-LVIYFILFC  549 (552)
Q Consensus       486 ~~~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~-gIIH~~L~~  549 (552)
                      ...+++||||||+.+ +|.++++....      +++..++.|+.||+.||.|||++ ||||+|||+
T Consensus       101 ~~~~~~~lv~e~~~~~~L~~~l~~~~~------~~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp  160 (360)
T 3eqc_A          101 YSDGEISICMEHMDGGSLDQVLKKAGR------IPEQILGKVSIAVIKGLTYLREKHKIMHRDVKP  160 (360)
T ss_dssp             EETTEEEEEECCCTTCBHHHHHHHHSS------CCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSG
T ss_pred             EECCEEEEEEECCCCCCHHHHHHHcCC------CCHHHHHHHHHHHHHHHHHHHHhCCEEcCCccH
Confidence            999999999999987 99999987653      89999999999999999999986 999999996

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.81  E-value=1.4e-19  Score=182.42  Aligned_cols=126  Identities=22%  Similarity=0.326  Sum_probs=112.0

Q ss_pred             cCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC---hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEe--
Q 008813          413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH--  487 (552)
Q Consensus       413 ~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s---k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~--  487 (552)
                      .++|++++.||+|+||.||+|++..+++.||||++...   ......+.+|+++|+.++|      +||+++++++..  
T Consensus        16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h------~~iv~~~~~~~~~~   89 (351)
T 3mi9_A           16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH------ENVVNLIEICRTKA   89 (351)
T ss_dssp             GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCC------TTBCCEEEEEEEC-
T ss_pred             ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccC------CCcccHhheeeccc
Confidence            37899999999999999999999999999999998654   2234567899999999998      999999999987  


Q ss_pred             ------CCEEEEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          488 ------LEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       488 ------~~hLyIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                            .+++||||||+.++|.+.+......     +++..++.|+.||+.||.|||++||||+|||+
T Consensus        90 ~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~-----~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp  152 (351)
T 3mi9_A           90 SPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK-----FTLSEIKRVMQMLLNGLYYIHRNKILHRDMKA  152 (351)
T ss_dssp             -------CEEEEEEECCSEEHHHHHHCTTSC-----CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSG
T ss_pred             cccccCCceEEEEEeccCCCHHHHHhhccCC-----CCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCH
Confidence                  4579999999999999988765432     89999999999999999999999999999997

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.81  E-value=1.9e-19  Score=180.48  Aligned_cols=129  Identities=22%  Similarity=0.207  Sum_probs=114.7

Q ss_pred             CceecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC--hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEE
Q 008813          409 NTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFY  486 (552)
Q Consensus       409 gdvi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s--k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~  486 (552)
                      ...+.++|++.+.||+|+||.||+|.+..+++.||||+++..  ......+.+|+++|+.++|      +||+++++++.
T Consensus         6 ~~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h------~~iv~~~~~~~   79 (353)
T 2b9h_A            6 VYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKH------ENIITIFNIQR   79 (353)
T ss_dssp             CCCSCTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCC------TTBCCEEEECC
T ss_pred             ccccccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcC------CCcCCeeeeec
Confidence            345678999999999999999999999999999999999743  3345677899999999998      99999999887


Q ss_pred             eC-----CEEEEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          487 HL-----EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       487 ~~-----~hLyIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      ..     ..+|||||++.++|.+++....       +++..++.++.||+.||.|||++||||+|||+-
T Consensus        80 ~~~~~~~~~~~lv~e~~~~~L~~~~~~~~-------~~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~  141 (353)
T 2b9h_A           80 PDSFENFNEVYIIQELMQTDLHRVISTQM-------LSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPS  141 (353)
T ss_dssp             CSCSTTCCCEEEEECCCSEEHHHHHHHCC-------CCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGG
T ss_pred             ccccCccceEEEEEeccCccHHHHHhhcC-------CCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHH
Confidence            54     6799999999999999988632       899999999999999999999999999999973

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.81  E-value=2.1e-19  Score=174.24  Aligned_cols=126  Identities=21%  Similarity=0.372  Sum_probs=113.6

Q ss_pred             CceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecCh----hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCC
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE  489 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk----~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~  489 (552)
                      ++|++.+.||+|+||.||+|.+..+++.||||++....    ...+.+.+|+.+++.++|      |||+++++++...+
T Consensus        11 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h------~~i~~~~~~~~~~~   84 (278)
T 3cok_A           11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKH------PSILELYNYFEDSN   84 (278)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCC------TTBCCEEEEEECSS
T ss_pred             ccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCC------CCeEeEEEEEccCC
Confidence            57999999999999999999999999999999997542    224678899999999998      99999999999999


Q ss_pred             EEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          490 HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       490 hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      .+||||||+.+ +|.++++....     ++++..++.++.||+.||.|||++||+|+||++-
T Consensus        85 ~~~lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~  141 (278)
T 3cok_A           85 YVYLVLEMCHNGEMNRYLKNRVK-----PFSENEARHFMHQIITGMLYLHSHGILHRDLTLS  141 (278)
T ss_dssp             EEEEEEECCTTEEHHHHHHTCSS-----CCCHHHHHHHHHHHHHHHHHHHHTTEECSSCCGG
T ss_pred             eEEEEEecCCCCcHHHHHhhccC-----CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHH
Confidence            99999999977 99999986532     2899999999999999999999999999999973

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.81  E-value=3e-19  Score=182.39  Aligned_cols=128  Identities=11%  Similarity=0.143  Sum_probs=114.8

Q ss_pred             ecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC----hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEe
Q 008813          412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND----KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH  487 (552)
Q Consensus       412 i~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s----k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~  487 (552)
                      ...+|.+++.||+|+||.||+|++..+++.||||++...    ....+.+.+|+++|+.++|      |||+++++++..
T Consensus        52 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~h------pniv~~~~~~~~  125 (348)
T 1u5q_A           52 PEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRH------PNTIQYRGCYLR  125 (348)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCC------TTBCCEEEEEEE
T ss_pred             hhhheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCC------CCEeeEEEEEEE
Confidence            346799999999999999999999999999999999753    2234678899999999998      999999999999


Q ss_pred             CCEEEEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          488 LEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       488 ~~hLyIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      .+.+||||||+.|+|.+++.....     ++++..++.|+.||+.||.|||++||||+|||+-
T Consensus       126 ~~~~~lv~e~~~g~l~~~l~~~~~-----~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~  183 (348)
T 1u5q_A          126 EHTAWLVMEYCLGSASDLLEVHKK-----PLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAG  183 (348)
T ss_dssp             TTEEEEEEECCSEEHHHHHHHHTS-----CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGG
T ss_pred             CCeEEEEEecCCCCHHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHH
Confidence            999999999999999998876543     2899999999999999999999999999999973

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.81  E-value=6e-20  Score=184.26  Aligned_cols=140  Identities=16%  Similarity=0.189  Sum_probs=121.8

Q ss_pred             CCCcceeeCceecCceEEE-EEeccCCceEEEEEEECCCCcEEEEEEEecC---hhhHHHHHHHHHHHHHhcccCCCCCC
Q 008813          401 NKDLPIILNTVIAGRYYVT-EYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEH  476 (552)
Q Consensus       401 ~~~y~v~~gdvi~~RY~Il-e~LGkG~FG~VykA~Dkktg~~VAVKIIk~s---k~~~~~~lrEIkILk~L~hhd~~d~p  476 (552)
                      .++..+...+.+.++|.+. +.||+|+||.||+|++..+++.||||+++..   ......+.+|+.+++.+.+|     |
T Consensus        15 ~~n~~~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~-----~   89 (327)
T 3lm5_A           15 TENLYFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSC-----P   89 (327)
T ss_dssp             -CCCCSBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTC-----T
T ss_pred             chhhHHHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCC-----C
Confidence            3455666667788999998 8999999999999999999999999999864   22356788999999999876     9


Q ss_pred             CeeEeEeEEEeCCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          477 HILRLYDYFYHLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       477 nIVrL~d~F~~~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ||+++++++...+.+||||||+.+ +|.+++......    .+++..++.|+.||+.||.|||++||||+|||+
T Consensus        90 ~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~----~~~~~~~~~i~~ql~~~L~~LH~~givH~Dikp  159 (327)
T 3lm5_A           90 RVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAE----MVSENDVIRLIKQILEGVYYLHQNNIVHLDLKP  159 (327)
T ss_dssp             TBCCEEEEEECSSEEEEEEECCTTEEGGGGGSSCC-C----CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCG
T ss_pred             CEEEEEEEEEeCCeEEEEEEecCCCcHHHHHHHhccc----CCCHHHHHHHHHHHHHHHHHHHHCCeecCcCCh
Confidence            999999999999999999999987 999988654322    289999999999999999999999999999997

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.81  E-value=1.9e-19  Score=174.00  Aligned_cols=129  Identities=17%  Similarity=0.150  Sum_probs=114.1

Q ss_pred             CceecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEe-
Q 008813          409 NTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH-  487 (552)
Q Consensus       409 gdvi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~-  487 (552)
                      +..+..+|++++.||+|+||.||+|.+..+++.||||+++...   ..+.+|+++++.++|      |||+++++++.. 
T Consensus         6 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~e~~~l~~l~h------~~i~~~~~~~~~~   76 (284)
T 2a19_B            6 DKRFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN---EKAEREVKALAKLDH------VNIVHYNGCWDGF   76 (284)
T ss_dssp             CHHHHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS---GGGHHHHHHHHHCCC------TTBCCEEEEEEEE
T ss_pred             cchhccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc---HHHHHHHHHHHhCCC------CCEEEEeeeEecc
Confidence            4566789999999999999999999999999999999998653   356789999999998      999999999864 


Q ss_pred             ---------------CCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          488 ---------------LEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       488 ---------------~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                                     ...++|||||+.+ +|.+++.......    +++..++.|+.||+.||.|||++||+|+||++-
T Consensus        77 ~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~----~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~  151 (284)
T 2a19_B           77 DYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEK----LDKVLALELFEQITKGVDYIHSKKLINRDLKPS  151 (284)
T ss_dssp             EEC---------CCEEEEEEEEECCCCSCBHHHHHHHGGGSC----CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGG
T ss_pred             ccCcccccccccccCcceEEEEEeccCCCCHHHHHhhccCCC----CCHHHHHHHHHHHHHHHHHHHhCCeeeccCCHH
Confidence                           4568999999987 9999998764322    899999999999999999999999999999963

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.81  E-value=1.7e-19  Score=188.00  Aligned_cols=127  Identities=17%  Similarity=0.142  Sum_probs=114.6

Q ss_pred             ecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecCh-hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCE
Q 008813          412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK-DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH  490 (552)
Q Consensus       412 i~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk-~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~h  490 (552)
                      +.++|++++.||+|+||.||+|.+..+++.||+|++.... .....+.+|+.+|+.|+|      |||++++++|.....
T Consensus        49 ~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~h------pnIv~~~~~~~~~~~  122 (387)
T 1kob_A           49 VYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHH------PKLINLHDAFEDKYE  122 (387)
T ss_dssp             GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCS------TTBCCEEEEEECSSE
T ss_pred             cccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCC------cCCCeEEEEEEeCCE
Confidence            4578999999999999999999999999999999998652 234578899999999998      999999999999999


Q ss_pred             EEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          491 LFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       491 LyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      +||||||+.+ +|.+++.....     .+++..++.|+.||+.||.|||++||||+|||+
T Consensus       123 ~~lv~E~~~gg~L~~~l~~~~~-----~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp  177 (387)
T 1kob_A          123 MVLILEFLSGGELFDRIAAEDY-----KMSEAEVINYMRQACEGLKHMHEHSIVHLDIKP  177 (387)
T ss_dssp             EEEEEECCCCCBHHHHTTCTTC-----CBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCG
T ss_pred             EEEEEEcCCCCcHHHHHHhhcC-----CCCHHHHHHHHHHHHHHHHHHHhCCeeecccch
Confidence            9999999977 99999875432     289999999999999999999999999999997

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=99.81  E-value=1.2e-19  Score=186.11  Aligned_cols=128  Identities=21%  Similarity=0.326  Sum_probs=108.5

Q ss_pred             eecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeC--
Q 008813          411 VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL--  488 (552)
Q Consensus       411 vi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~--  488 (552)
                      ....+|++++.||+|+||.||+|++..+++.||||++......   ..+|+.+|+.++|      +|||+++++|...  
T Consensus         4 ~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~---~~~E~~il~~l~h------pnIv~l~~~~~~~~~   74 (383)
T 3eb0_A            4 TSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRY---KNRELDIMKVLDH------VNIIKLVDYFYTTGD   74 (383)
T ss_dssp             --CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTTS---CCHHHHHHTTCCC------TTBCCEEEEEEEC--
T ss_pred             cccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcch---HHHHHHHHHHcCC------CCccchhheeeecCc
Confidence            3457899999999999999999999999999999999765432   3479999999998      9999999999543  


Q ss_pred             ------------------------------------CEEEEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHH
Q 008813          489 ------------------------------------EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLT  532 (552)
Q Consensus       489 ------------------------------------~hLyIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~  532 (552)
                                                          .+++|||||+.++|.++++.....+  ..+++..++.|+.||+.
T Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~--~~l~~~~~~~i~~qi~~  152 (383)
T 3eb0_A           75 EEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPDTLHKVLKSFIRSG--RSIPMNLISIYIYQLFR  152 (383)
T ss_dssp             -----------------------------------CCEEEEEECCCSEEHHHHHHHHHHTT--CCCCHHHHHHHHHHHHH
T ss_pred             ccccccccccccccccccccccccccccccccCCCceEEEEEEecCCccHHHHHHHHHhcC--CCCCHHHHHHHHHHHHH
Confidence                                                4599999999999998887533222  23999999999999999


Q ss_pred             HHHHHHhCCCeeeeccc
Q 008813          533 LLMLIFLLLVIYFILFC  549 (552)
Q Consensus       533 AL~YLHs~gIIH~~L~~  549 (552)
                      ||.|||++||||+|||+
T Consensus       153 aL~~LH~~gi~H~Dikp  169 (383)
T 3eb0_A          153 AVGFIHSLGICHRDIKP  169 (383)
T ss_dssp             HHHHHHTTTEECSCCCG
T ss_pred             HHHHHHHCcCccCccCH
Confidence            99999999999999996

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.81  E-value=2.2e-19  Score=174.38  Aligned_cols=132  Identities=17%  Similarity=0.135  Sum_probs=108.0

Q ss_pred             eecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecCh--hhHHH-HHHHHHHHHHhcccCCCCCCCeeEeEeEEEe
Q 008813          411 VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK--DFFDQ-SLDEIKLLKLVNKNDPADEHHILRLYDYFYH  487 (552)
Q Consensus       411 vi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk--~~~~~-~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~  487 (552)
                      +..++|++++.||+|+||.||+|++..+++.||||+++...  ..... ...+..+++.++|      |||+++++++..
T Consensus         4 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h------~~iv~~~~~~~~   77 (290)
T 3fme_A            4 VKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDC------PFTVTFYGALFR   77 (290)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCC------TTBCCEEEEEEC
T ss_pred             ccHHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCC------CeEEEEeeeeec
Confidence            45678999999999999999999999999999999997642  22223 3334444566666      999999999999


Q ss_pred             CCEEEEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhC-CCeeeecccc
Q 008813          488 LEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLL-LVIYFILFCF  550 (552)
Q Consensus       488 ~~hLyIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~-gIIH~~L~~~  550 (552)
                      .+++||||||+.++|.++++.....+  .++++..++.|+.||+.||.|||++ ||||+|||+-
T Consensus        78 ~~~~~lv~e~~~~~l~~~l~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dlkp~  139 (290)
T 3fme_A           78 EGDVWICMELMDTSLDKFYKQVIDKG--QTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPS  139 (290)
T ss_dssp             SSSEEEEEECCSEEHHHHHHHHHHTT--CCCCHHHHHHHHHHHHHHHHHHHHHSCCCCCCCSGG
T ss_pred             cCCEEEEEehhccchHHHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHH
Confidence            99999999999999988887543221  2399999999999999999999998 9999999973

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.80  E-value=1.3e-19  Score=194.59  Aligned_cols=129  Identities=25%  Similarity=0.321  Sum_probs=116.5

Q ss_pred             CceecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecCh----hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeE
Q 008813          409 NTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDY  484 (552)
Q Consensus       409 gdvi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk----~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~  484 (552)
                      +.+..++|.+.+.||+|+||.||+|.+..+++.||||+++...    .....+.+|+.+|+.++|      |||++++++
T Consensus        11 ~~~~~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~H------pnIv~l~~~   84 (476)
T 2y94_A           11 GRVKIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRH------PHIIKLYQV   84 (476)
T ss_dssp             SCCEETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCC------TTBCCEEEE
T ss_pred             CCceecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCC------CCCCcEEEE
Confidence            4456689999999999999999999999999999999997642    234678899999999998      999999999


Q ss_pred             EEeCCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          485 FYHLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       485 F~~~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      +...+.+||||||+.+ +|.+++..+..      +++..++.|+.||+.||.|||++||||+|||+
T Consensus        85 ~~~~~~~~lv~E~~~gg~L~~~l~~~~~------l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp  144 (476)
T 2y94_A           85 ISTPSDIFMVMEYVSGGELFDYICKNGR------LDEKESRRLFQQILSGVDYCHRHMVVHRDLKP  144 (476)
T ss_dssp             EECSSEEEEEEECCSSEEHHHHTTSSSS------CCHHHHHHHHHHHHHHHHHHHTTTEECSCCSG
T ss_pred             EEECCEEEEEEeCCCCCcHHHHHHhcCC------CCHHHHHHHHHHHHHHHHHHHHCCCCcccccH
Confidence            9999999999999976 99999876432      89999999999999999999999999999997

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.80  E-value=5.9e-19  Score=174.14  Aligned_cols=133  Identities=23%  Similarity=0.219  Sum_probs=114.8

Q ss_pred             ceecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC----hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEE
Q 008813          410 TVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND----KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYF  485 (552)
Q Consensus       410 dvi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s----k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F  485 (552)
                      ....++|++.+.||+|+||.||+|.+..+++.||||+++..    ......+.+|+.+++.++|      +||+++++++
T Consensus        28 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h------~~i~~~~~~~  101 (310)
T 2wqm_A           28 YNTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNH------PNVIKYYASF  101 (310)
T ss_dssp             TSSGGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCC------TTBCCEEEEE
T ss_pred             cccccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCC------CCEeeEEEEE
Confidence            34557899999999999999999999999999999999752    3345678899999999998      9999999999


Q ss_pred             EeCCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          486 YHLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       486 ~~~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      ...+.++||||++.+ +|.+++.......  ..+++..++.++.||+.||.|||++||+|+||++-
T Consensus       102 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~--~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~  165 (310)
T 2wqm_A          102 IEDNELNIVLELADAGDLSRMIKHFKKQK--RLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPA  165 (310)
T ss_dssp             EETTEEEEEEECCCSCBHHHHHHHHHHTT--CCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGG
T ss_pred             EcCCcEEEEEecCCCCCHHHHHHHhcccc--cCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCcHH
Confidence            999999999999987 9999997643211  23899999999999999999999999999999863

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=99.80  E-value=3.2e-19  Score=184.86  Aligned_cols=125  Identities=21%  Similarity=0.212  Sum_probs=111.7

Q ss_pred             CceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC---hhhHHHHHHHHHHHHHhcc-cCCCCCCCeeEeEeEEEeCC
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNK-NDPADEHHILRLYDYFYHLE  489 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s---k~~~~~~lrEIkILk~L~h-hd~~d~pnIVrL~d~F~~~~  489 (552)
                      .+|++++.||+|+||.||+|.+.. ++.||||++...   ....+.+.+|+.+|+.|.| |     +|||++++++...+
T Consensus        56 ~~y~~~~~LG~G~fg~Vy~~~~~~-~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~-----~~iv~~~~~~~~~~  129 (390)
T 2zmd_A           56 RIYSILKQIGSGGSSKVFQVLNEK-KQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS-----DKIIRLYDYEITDQ  129 (390)
T ss_dssp             EEEEEEEEEECCSSEEEEEEECTT-CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTC-----TTBCCEEEEEECSS
T ss_pred             CceEEEEEEccCCCeEEEEEEcCC-CCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCC-----CeEEEEEEEEecCC
Confidence            569999999999999999999875 889999999754   3345778999999999985 4     89999999999999


Q ss_pred             EEEEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          490 HLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       490 hLyIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      .+|||||+.+++|.++++....      +++..++.|+.||+.||.|||++||||+|||+-
T Consensus       130 ~~~lv~E~~~~~L~~~l~~~~~------~~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~  184 (390)
T 2zmd_A          130 YIYMVMECGNIDLNSWLKKKKS------IDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPA  184 (390)
T ss_dssp             EEEEEEECCSEEHHHHHHHCSS------CCHHHHHHHHHHHHHHHHHHHTTTCCCCCCCGG
T ss_pred             EEEEEEecCCCCHHHHHHhcCC------CCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHH
Confidence            9999999766799999987643      899999999999999999999999999999973

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=99.80  E-value=1.3e-19  Score=186.13  Aligned_cols=125  Identities=23%  Similarity=0.288  Sum_probs=106.2

Q ss_pred             ecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC---hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeC
Q 008813          412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL  488 (552)
Q Consensus       412 i~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s---k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~  488 (552)
                      +.++|++++.||+|+||.||+|.+..+++.||||++...   ....+.+.+|+++|+.++|      |||+++++++...
T Consensus        23 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h------pnIv~l~~~~~~~   96 (367)
T 1cm8_A           23 VRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRH------ENVIGLLDVFTPD   96 (367)
T ss_dssp             CBSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCB------TTBCCCSEEECSC
T ss_pred             ecceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCC------cCCCCceeeEecC
Confidence            457899999999999999999999999999999999653   3345678899999999998      9999999999866


Q ss_pred             ------CEEEEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          489 ------EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       489 ------~hLyIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                            ..+||||||++++|.++++...       +++..++.++.||+.||.|||++||||+|||+
T Consensus        97 ~~~~~~~~~~lv~e~~~~~L~~~~~~~~-------l~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp  156 (367)
T 1cm8_A           97 ETLDDFTDFYLVMPFMGTDLGKLMKHEK-------LGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKP  156 (367)
T ss_dssp             SSTTTCCCCEEEEECCSEEHHHHHHHCC-------CCHHHHHHHHHHHHHHHHHHHHTTEECCCCCG
T ss_pred             CccccCceEEEEEecCCCCHHHHHhcCC-------CCHHHHHHHHHHHHHHHHHHHHCCccccCcCH
Confidence                  3569999999779999998632       89999999999999999999999999999997

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.80  E-value=1.9e-19  Score=184.63  Aligned_cols=134  Identities=16%  Similarity=0.106  Sum_probs=113.5

Q ss_pred             ceecCceEEEEEeccCCceEEEEEE-----ECCCCcEEEEEEEecC--hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeE
Q 008813          410 TVIAGRYYVTEYLGSAAFSKVFQAQ-----DLHTGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLY  482 (552)
Q Consensus       410 dvi~~RY~Ile~LGkG~FG~VykA~-----Dkktg~~VAVKIIk~s--k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~  482 (552)
                      ++..++|++++.||+|+||.||+|+     +..+++.||||+++..  ......+.+|+.+++.++|      ||||+++
T Consensus        67 ~~~~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h------pnIv~~~  140 (367)
T 3l9p_A           67 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNH------QNIVRCI  140 (367)
T ss_dssp             BCCGGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCC------TTBCCEE
T ss_pred             hcCHhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCC------CCCCeEE
Confidence            3556789999999999999999999     4457789999999753  3344578899999999998      9999999


Q ss_pred             eEEEeCCEEEEEEecCCC-CHHHHHHhhccCC-CCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          483 DYFYHLEHLFIVCELLRA-NLYEFQKFNQESG-GEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       483 d~F~~~~hLyIVmEll~G-sL~d~Lk~~~~~g-~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      +++......||||||+.+ +|.++++...... ....+++..++.|+.||+.||.|||++||||+|||+
T Consensus       141 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp  209 (367)
T 3l9p_A          141 GVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAA  209 (367)
T ss_dssp             EEECSSSSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCG
T ss_pred             EEEecCCCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCCeeCCCCCh
Confidence            999999999999999976 9999998764211 112389999999999999999999999999999997

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=99.80  E-value=3.2e-19  Score=185.71  Aligned_cols=124  Identities=20%  Similarity=0.196  Sum_probs=106.6

Q ss_pred             cCceEEE-EEeccCCceEEEEEEECCCCcEEEEEEEecChhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEe----
Q 008813          413 AGRYYVT-EYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH----  487 (552)
Q Consensus       413 ~~RY~Il-e~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~----  487 (552)
                      .++|.+. +.||+|+||+||+|.++.+++.||||+++..    ..+.+|+.++.++.+|     +||++++++|..    
T Consensus        60 ~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~----~~~~~E~~~~~~~~~h-----p~iv~l~~~~~~~~~~  130 (400)
T 1nxk_A           60 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC----PKARREVELHWRASQC-----PHIVRIVDVYENLYAG  130 (400)
T ss_dssp             GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS----HHHHHHHHHHHHHTTS-----TTBCCEEEEEEEEETT
T ss_pred             cccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc----hhHHHHHHHHHHhcCC-----CCcceEeEEEeecccC
Confidence            3557766 7899999999999999999999999999754    3567899988766544     999999999976    


Q ss_pred             CCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          488 LEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       488 ~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ..++|||||||.+ +|.+++......    .+++..++.|+.||+.||.|||++||||+|||+
T Consensus       131 ~~~~~lv~E~~~gg~L~~~l~~~~~~----~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp  189 (400)
T 1nxk_A          131 RKCLLIVMECLDGGELFSRIQDRGDQ----AFTEREASEIMKSIGEAIQYLHSINIAHRDVKP  189 (400)
T ss_dssp             EEEEEEEEECCCSEEHHHHHHCC-------CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCG
T ss_pred             CcEEEEEEEeCCCCcHHHHHHHhCCC----CCCHHHHHHHHHHHHHHHHHHHHCCccccCcCc
Confidence            5789999999987 999999875432    289999999999999999999999999999996

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.80  E-value=3.6e-19  Score=173.53  Aligned_cols=127  Identities=20%  Similarity=0.245  Sum_probs=114.8

Q ss_pred             ecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecCh----hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEe
Q 008813          412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH  487 (552)
Q Consensus       412 i~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk----~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~  487 (552)
                      ..++|++.+.||+|+||.||+|.+..+++.||||++....    .....+.+|+.+++.++|      +||+++++++..
T Consensus        12 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h------~~i~~~~~~~~~   85 (284)
T 2vgo_A           12 TIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH------PNILRMYNYFHD   85 (284)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCC------TTBCCEEEEEEC
T ss_pred             hhhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCC------CCEeeEEEEEEc
Confidence            4478999999999999999999999999999999997532    224578899999999998      999999999999


Q ss_pred             CCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          488 LEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       488 ~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      .+.+|+|||++.+ +|.+++.....      +++..++.++.||+.||.|||++||+|+||++-
T Consensus        86 ~~~~~lv~e~~~~~~L~~~l~~~~~------~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~  143 (284)
T 2vgo_A           86 RKRIYLMLEFAPRGELYKELQKHGR------FDEQRSATFMEELADALHYCHERKVIHRDIKPE  143 (284)
T ss_dssp             SSEEEEEECCCTTEEHHHHHHHHSS------CCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGG
T ss_pred             CCEEEEEEEeCCCCcHHHHHHhcCC------CCHHHHHHHHHHHHHHHHHHHHCCceecCCCHH
Confidence            9999999999987 99999987653      899999999999999999999999999999863

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.80  E-value=1.1e-19  Score=186.72  Aligned_cols=128  Identities=18%  Similarity=0.196  Sum_probs=114.8

Q ss_pred             eecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC--hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeC
Q 008813          411 VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL  488 (552)
Q Consensus       411 vi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s--k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~  488 (552)
                      +..++|.+.+.||+|+||.||+|.+..+++.||||+++..  ......+.+|+++|+.++|      |||+++++++...
T Consensus       111 ~~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h------pniv~~~~~~~~~  184 (377)
T 3cbl_A          111 LNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSH------PNIVRLIGVCTQK  184 (377)
T ss_dssp             CCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCC------TTBCCEEEEECSS
T ss_pred             EchHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCC------CCEEEEEEEEecC
Confidence            3447899999999999999999999999999999999754  2334567899999999998      9999999999999


Q ss_pred             CEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          489 EHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       489 ~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      +.+||||||+.+ +|.++++.....     +++..++.++.||+.||.|||++||||+|||+
T Consensus       185 ~~~~lv~e~~~~g~L~~~l~~~~~~-----~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp  241 (377)
T 3cbl_A          185 QPIYIVMELVQGGDFLTFLRTEGAR-----LRVKTLLQMVGDAAAGMEYLESKCCIHRDLAA  241 (377)
T ss_dssp             SSCEEEEECCTTCBHHHHHHHHGGG-----CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSG
T ss_pred             CCcEEEEEcCCCCCHHHHHHhcCCC-----CCHHHHHHHHHHHHHHHHHHHHCCcCCcccCH
Confidence            999999999976 999999876532     89999999999999999999999999999997

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.80  E-value=1.9e-19  Score=179.46  Aligned_cols=135  Identities=16%  Similarity=0.134  Sum_probs=115.2

Q ss_pred             ceecCceEEEEEeccCCceEEEEEEEC-----CCCcEEEEEEEecC--hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeE
Q 008813          410 TVIAGRYYVTEYLGSAAFSKVFQAQDL-----HTGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLY  482 (552)
Q Consensus       410 dvi~~RY~Ile~LGkG~FG~VykA~Dk-----ktg~~VAVKIIk~s--k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~  482 (552)
                      .+..++|++++.||+|+||.||+|++.     .+++.||||+++..  ......+.+|+.+++.++|      |||++++
T Consensus        43 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h------p~iv~~~  116 (343)
T 1luf_A           43 EYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDN------PNIVKLL  116 (343)
T ss_dssp             BCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCC------TTBCCEE
T ss_pred             EecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCC------CCEEEEE
Confidence            345578999999999999999999987     35589999999764  3345678899999999988      9999999


Q ss_pred             eEEEeCCEEEEEEecCCC-CHHHHHHhhccCC------------------CCcCCCHHHHHHHHHHHHHHHHHHHhCCCe
Q 008813          483 DYFYHLEHLFIVCELLRA-NLYEFQKFNQESG------------------GEAYFTLGRLQVCSTFLLTLLMLIFLLLVI  543 (552)
Q Consensus       483 d~F~~~~hLyIVmEll~G-sL~d~Lk~~~~~g------------------~~~pLSe~~I~~Ia~QIL~AL~YLHs~gII  543 (552)
                      +++...+++||||||+.+ +|.++++......                  ...++++..++.|+.||+.||.|||++|||
T Consensus       117 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iv  196 (343)
T 1luf_A          117 GVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFV  196 (343)
T ss_dssp             EEECSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred             EEEccCCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence            999999999999999987 9999998753110                  012489999999999999999999999999


Q ss_pred             eeecccc
Q 008813          544 YFILFCF  550 (552)
Q Consensus       544 H~~L~~~  550 (552)
                      |+|||+-
T Consensus       197 H~Dlkp~  203 (343)
T 1luf_A          197 HRDLATR  203 (343)
T ss_dssp             CSCCSGG
T ss_pred             cCCCCcc
Confidence            9999973

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.80  E-value=1.2e-19  Score=190.55  Aligned_cols=127  Identities=22%  Similarity=0.271  Sum_probs=106.5

Q ss_pred             eecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC----hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEE
Q 008813          411 VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND----KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFY  486 (552)
Q Consensus       411 vi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s----k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~  486 (552)
                      +..++|++++.||+|+||.||+|++..+++.||||+++..    ......+.+|+++|+.++|      |||++++++|.
T Consensus       145 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h------~~iv~l~~~~~  218 (446)
T 4ejn_A          145 VTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH------PFLTALKYSFQ  218 (446)
T ss_dssp             CCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSC------TTSCCEEEEEE
T ss_pred             CChHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCC------CeEeeEEEEEe
Confidence            3457899999999999999999999999999999999853    2234567789999999988      99999999999


Q ss_pred             eCCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHh-CCCeeeeccc
Q 008813          487 HLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFL-LLVIYFILFC  549 (552)
Q Consensus       487 ~~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs-~gIIH~~L~~  549 (552)
                      ..+++||||||+.+ +|.+++.....      +++..++.|+.||+.||.|||+ +||||+|||+
T Consensus       219 ~~~~~~lv~e~~~~~~L~~~l~~~~~------~~~~~~~~~~~qi~~aL~~LH~~~giiHrDlkp  277 (446)
T 4ejn_A          219 THDRLCFVMEYANGGELFFHLSRERV------FSEDRARFYGAEIVSALDYLHSEKNVVYRDLKL  277 (446)
T ss_dssp             ETTEEEEEECCCSSCBHHHHHHHHSC------CCHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCG
T ss_pred             eCCEEEEEEeeCCCCcHHHHHHhcCC------CCHHHHHHHHHHHHHHHHHHhhcCCEEECCCCH
Confidence            99999999999987 99999987653      8999999999999999999998 9999999997

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.80  E-value=1e-19  Score=178.37  Aligned_cols=129  Identities=20%  Similarity=0.266  Sum_probs=111.2

Q ss_pred             ecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecCh-----hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEE
Q 008813          412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK-----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFY  486 (552)
Q Consensus       412 i~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk-----~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~  486 (552)
                      +.++|++++.||+|+||.||+|.+..+++.||||+++...     .....+.+|+.+++.++|      +||+++++++.
T Consensus         3 l~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h------~~i~~~~~~~~   76 (305)
T 2wtk_C            3 LIGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRH------KNVIQLVDVLY   76 (305)
T ss_dssp             --CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCC------TTBCCEEEEEE
T ss_pred             cccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCC------CCeeEEEEEEE
Confidence            4578999999999999999999999999999999997642     234678899999999998      99999999985


Q ss_pred             --eCCEEEEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          487 --HLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       487 --~~~hLyIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                        ...++||||||+.++|.+++.......    +++..++.|+.||+.||.|||++||+|+|||+-
T Consensus        77 ~~~~~~~~lv~e~~~~~l~~~~~~~~~~~----~~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~  138 (305)
T 2wtk_C           77 NEEKQKMYMVMEYCVCGMQEMLDSVPEKR----FPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPG  138 (305)
T ss_dssp             CC---CEEEEEECCSEEHHHHHHHSTTCS----CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGG
T ss_pred             cCCCCeEEEEehhccCCHHHHHHhCcccc----cCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcc
Confidence              446899999999999988888754332    899999999999999999999999999999863

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.80  E-value=4.2e-19  Score=176.33  Aligned_cols=121  Identities=20%  Similarity=0.206  Sum_probs=109.8

Q ss_pred             cCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEe--CCE
Q 008813          413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH--LEH  490 (552)
Q Consensus       413 ~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~--~~h  490 (552)
                      .++|++++.||+|+||.||+|++..+++.||||+++...  .+.+.+|+.+|+.|++|     +||+++++++..  ..+
T Consensus        35 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~E~~~l~~l~~~-----~~i~~~~~~~~~~~~~~  107 (330)
T 3nsz_A           35 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK--KKKIKREIKILENLRGG-----PNIITLADIVKDPVSRT  107 (330)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCC--HHHHHHHHHHHHHHTTS-----TTBCCEEEEEECTTTCC
T ss_pred             CCceEEEEEecccCCeEEEEEEECCCCcEEEEEEecccc--hHHHHHHHHHHHHcCCC-----CCEEEeeeeeccCCCCc
Confidence            478999999999999999999999999999999998543  36788999999999844     999999999997  678


Q ss_pred             EEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          491 LFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       491 LyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ++||||++.+ +|.++++.         +++..++.|+.||+.||.|||++||||+|||+
T Consensus       108 ~~lv~e~~~~~~l~~~~~~---------~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp  158 (330)
T 3nsz_A          108 PALVFEHVNNTDFKQLYQT---------LTDYDIRFYMYEILKALDYCHSMGIMHRDVKP  158 (330)
T ss_dssp             EEEEEECCCCCCHHHHGGG---------CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSG
T ss_pred             eEEEEeccCchhHHHHHHh---------CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCH
Confidence            9999999987 89888743         89999999999999999999999999999997

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.80  E-value=2.8e-19  Score=179.59  Aligned_cols=135  Identities=19%  Similarity=0.209  Sum_probs=113.5

Q ss_pred             ceecCceEEEEEeccCCceEEEEEE-----ECCCCcEEEEEEEecC--hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeE
Q 008813          410 TVIAGRYYVTEYLGSAAFSKVFQAQ-----DLHTGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLY  482 (552)
Q Consensus       410 dvi~~RY~Ile~LGkG~FG~VykA~-----Dkktg~~VAVKIIk~s--k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~  482 (552)
                      .+..++|++.+.||+|+||.||+|+     +..+++.||||+++..  ....+.+.+|+++|+.+.+|     |||++++
T Consensus        18 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h-----pniv~~~   92 (359)
T 3vhe_A           18 EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH-----LNVVNLL   92 (359)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCC-----TTBCCEE
T ss_pred             cccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCC-----cceeeee
Confidence            3456799999999999999999999     5567799999999864  23446789999999999654     9999999


Q ss_pred             eEEEeCC-EEEEEEecCCC-CHHHHHHhhccCC-----------------------------------------------
Q 008813          483 DYFYHLE-HLFIVCELLRA-NLYEFQKFNQESG-----------------------------------------------  513 (552)
Q Consensus       483 d~F~~~~-hLyIVmEll~G-sL~d~Lk~~~~~g-----------------------------------------------  513 (552)
                      +++...+ +++|||||+.+ +|.++++......                                               
T Consensus        93 ~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (359)
T 3vhe_A           93 GACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKS  172 (359)
T ss_dssp             EEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC-------------------------------------------
T ss_pred             eeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccc
Confidence            9998764 59999999987 9999998654210                                               


Q ss_pred             -------------CCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          514 -------------GEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       514 -------------~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                                   ....+++..++.|+.||+.||.|||++||||+|||+
T Consensus       173 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~ivH~Dikp  221 (359)
T 3vhe_A          173 LSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAA  221 (359)
T ss_dssp             -----------CTTTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSG
T ss_pred             cchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHCCcccCCCCh
Confidence                         011289999999999999999999999999999997

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.80  E-value=1.4e-19  Score=174.62  Aligned_cols=127  Identities=15%  Similarity=0.140  Sum_probs=114.2

Q ss_pred             ecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecCh--hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCC
Q 008813          412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE  489 (552)
Q Consensus       412 i~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk--~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~  489 (552)
                      +.++|++++.||+|+||.||+|.+..+++.||||++....  ...+.+.+|+.+++.++|      +||+++++++...+
T Consensus         5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h------~~i~~~~~~~~~~~   78 (276)
T 2yex_A            5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH------ENVVKFYGHRREGN   78 (276)
T ss_dssp             HHHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCC------TTBCCEEEEEEETT
T ss_pred             eecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCC------CCceeeeeEEEcCC
Confidence            3468999999999999999999999999999999997542  345678899999999998      99999999999999


Q ss_pred             EEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          490 HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       490 hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      .+|+|||++.+ +|.+++.....      +++..++.++.||+.||.|||++||+|+||++-
T Consensus        79 ~~~lv~e~~~~~~L~~~l~~~~~------~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~  134 (276)
T 2yex_A           79 IQYLFLEYCSGGELFDRIEPDIG------MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPE  134 (276)
T ss_dssp             EEEEEEECCTTEEGGGGSBTTTB------CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGG
T ss_pred             EEEEEEEecCCCcHHHHHhhccC------CCHHHHHHHHHHHHHHHHHHHhCCeeccCCChH
Confidence            99999999987 99998865432      899999999999999999999999999999973

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.80  E-value=1e-19  Score=181.91  Aligned_cols=132  Identities=14%  Similarity=0.161  Sum_probs=112.5

Q ss_pred             ecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC------hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEE
Q 008813          412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND------KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYF  485 (552)
Q Consensus       412 i~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s------k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F  485 (552)
                      +.++|++++.||+|+||.||+|.+..+++.||||++...      ....+.+.+|+++++.++|      |||+++++++
T Consensus        24 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h------pniv~~~~~~   97 (345)
T 3hko_A           24 LQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHH------PNIARLYEVY   97 (345)
T ss_dssp             HHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCC------TTBCCEEEEE
T ss_pred             hhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCC------CCcceeehhh
Confidence            457899999999999999999999999999999999753      2344678899999999998      9999999999


Q ss_pred             EeCCEEEEEEecCCC-CHHHHHHhhccC----------------------------------CCCcCCCHHHHHHHHHHH
Q 008813          486 YHLEHLFIVCELLRA-NLYEFQKFNQES----------------------------------GGEAYFTLGRLQVCSTFL  530 (552)
Q Consensus       486 ~~~~hLyIVmEll~G-sL~d~Lk~~~~~----------------------------------g~~~pLSe~~I~~Ia~QI  530 (552)
                      ...+.+||||||+.+ +|.+++......                                  .....+++..++.|+.||
T Consensus        98 ~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi  177 (345)
T 3hko_A           98 EDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQI  177 (345)
T ss_dssp             ECSSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHH
T ss_pred             ccCCeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHH
Confidence            999999999999976 999988521110                                  001125688899999999


Q ss_pred             HHHHHHHHhCCCeeeeccc
Q 008813          531 LTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       531 L~AL~YLHs~gIIH~~L~~  549 (552)
                      +.||.|||++||||+|||+
T Consensus       178 ~~~l~~LH~~~ivH~Dlkp  196 (345)
T 3hko_A          178 FSALHYLHNQGICHRDIKP  196 (345)
T ss_dssp             HHHHHHHHHTTEECCCCCG
T ss_pred             HHHHHHHHHCCccccCCCh
Confidence            9999999999999999997

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.80  E-value=4.8e-19  Score=174.94  Aligned_cols=132  Identities=17%  Similarity=0.175  Sum_probs=113.4

Q ss_pred             eecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC-hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEE---
Q 008813          411 VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND-KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFY---  486 (552)
Q Consensus       411 vi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s-k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~---  486 (552)
                      +...||++.+.||+|+||.||+|++..+++.||||++... ......+.+|+.+++.+..|     |||+++++++.   
T Consensus        25 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h-----~~iv~~~~~~~~~~   99 (337)
T 3ll6_A           25 LGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGH-----PNIVQFCSAASIGK   99 (337)
T ss_dssp             ETTEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTS-----TTBCCEEEEEEECT
T ss_pred             ccCceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccC-----CChhhccccccccc
Confidence            3346899999999999999999999999999999988654 33456788999999999733     99999999994   


Q ss_pred             -----eCCEEEEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCC--Ceeeecccc
Q 008813          487 -----HLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLL--VIYFILFCF  550 (552)
Q Consensus       487 -----~~~hLyIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~g--IIH~~L~~~  550 (552)
                           ....++|||||+.++|.++++.....+   ++++..++.|+.||+.||.|||++|  |||+|||+-
T Consensus       100 ~~~~~~~~~~~lv~e~~~g~L~~~l~~~~~~~---~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~Dikp~  167 (337)
T 3ll6_A          100 EESDTGQAEFLLLTELCKGQLVEFLKKMESRG---PLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVE  167 (337)
T ss_dssp             TTSTTSSEEEEEEEECCSEEHHHHHHHHHTTC---SCCHHHHHHHHHHHHHHHHHHHTSSSCCBCCCCCGG
T ss_pred             cccccCCceEEEEEEecCCCHHHHHHHhhccC---CCCHHHHHHHHHHHHHHHHHHHhCCCCEEEccCCcc
Confidence                 335699999999999999998644322   3899999999999999999999999  999999973

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.80  E-value=1.6e-19  Score=193.18  Aligned_cols=129  Identities=15%  Similarity=0.178  Sum_probs=117.3

Q ss_pred             eecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCE
Q 008813          411 VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH  490 (552)
Q Consensus       411 vi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~h  490 (552)
                      +...+|.+.+.||+|+||.||+|.++.++..||||+++......+.+.+|+.+|+.|+|      ||||++++++...+.
T Consensus       217 ~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h------pniv~l~~~~~~~~~  290 (495)
T 1opk_A          217 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH------PNLVQLLGVCTREPP  290 (495)
T ss_dssp             CCGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSSCHHHHHHHHHHHHHCCC------TTBCCEEEEECSSSS
T ss_pred             cCHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcccchHHHHHHHHHHHhcCC------CCEeeEEEEEecCCc
Confidence            44567999999999999999999999989999999998765556789999999999998      999999999999999


Q ss_pred             EEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          491 LFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       491 LyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      +||||||+.+ +|.++++......    +++..++.|+.||+.||.|||+++|||+|||+
T Consensus       291 ~~lv~E~~~~g~L~~~l~~~~~~~----~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp  346 (495)
T 1opk_A          291 FYIITEFMTYGNLLDYLRECNRQE----VSAVVLLYMATQISSAMEYLEKKNFIHRNLAA  346 (495)
T ss_dssp             CEEEEECCTTCBHHHHHHHSCTTT----SCHHHHHHHHHHHHHHHHHHHHTTEECSCCSG
T ss_pred             EEEEEEccCCCCHHHHHHhcCcCC----CCHHHHHHHHHHHHHHHHHHHhCCcccCCCCh
Confidence            9999999986 9999998754322    89999999999999999999999999999997

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=99.80  E-value=1.4e-19  Score=187.79  Aligned_cols=126  Identities=17%  Similarity=0.227  Sum_probs=104.3

Q ss_pred             ecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecCh----hhHHHHHHHHHH-HHHhcccCCCCCCCeeEeEeEEE
Q 008813          412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKL-LKLVNKNDPADEHHILRLYDYFY  486 (552)
Q Consensus       412 i~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk----~~~~~~lrEIkI-Lk~L~hhd~~d~pnIVrL~d~F~  486 (552)
                      ..++|++++.||+|+||+||+|+++.+++.||||++++..    .....+.+|..+ ++.++|      |||++++++|.
T Consensus        36 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~h------p~Iv~l~~~~~  109 (373)
T 2r5t_A           36 KPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKH------PFLVGLHFSFQ  109 (373)
T ss_dssp             CGGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCC------TTBCCEEEEEE
T ss_pred             ChhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCC------CCCCCEEEEEE
Confidence            3468999999999999999999999999999999998642    223455667666 355666      99999999999


Q ss_pred             eCCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          487 HLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       487 ~~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ..+++||||||+.+ +|.++++....      +++..++.|+.||+.||.|||++||||+|||+
T Consensus       110 ~~~~~~lv~E~~~gg~L~~~l~~~~~------~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp  167 (373)
T 2r5t_A          110 TADKLYFVLDYINGGELFYHLQRERC------FLEPRARFYAAEIASALGYLHSLNIVYRDLKP  167 (373)
T ss_dssp             CSSEEEEEEECCCSCBHHHHHHHHSS------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCG
T ss_pred             eCCEEEEEEeCCCCCcHHHHHHhcCC------CCHHHHHHHHHHHHHHHHHHHHCCceecCCCH
Confidence            99999999999987 99999987653      89999999999999999999999999999997

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.80  E-value=3.4e-19  Score=174.34  Aligned_cols=129  Identities=19%  Similarity=0.267  Sum_probs=116.1

Q ss_pred             ceecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecCh---hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEE
Q 008813          410 TVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFY  486 (552)
Q Consensus       410 dvi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk---~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~  486 (552)
                      ..+.+||++++.||+|+||.||+|.+..+++.||||++....   .....+.+|+++++.++|      |||+++++++.
T Consensus        18 ~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h------~~i~~~~~~~~   91 (287)
T 2wei_A           18 GTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDH------PNIMKLFEILE   91 (287)
T ss_dssp             HHHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCC------TTBCCEEEEEE
T ss_pred             HHHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccC------CCccEEEEEEe
Confidence            356689999999999999999999999999999999997532   235678899999999988      99999999999


Q ss_pred             eCCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          487 HLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       487 ~~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      ..+.+++|||++.+ +|.+++.....      +++..++.++.||+.||.|||++||+|+||++-
T Consensus        92 ~~~~~~lv~e~~~~~~L~~~l~~~~~------~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~  150 (287)
T 2wei_A           92 DSSSFYIVGELYTGGELFDEIIKRKR------FSEHDAARIIKQVFSGITYMHKHNIVHRDLKPE  150 (287)
T ss_dssp             CSSEEEEEECCCCSCBHHHHHHHHSS------CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGG
T ss_pred             CCCeEEEEEEccCCCCHHHHHHhcCC------CCHHHHHHHHHHHHHHHHHHHHCCeeccCCChh
Confidence            99999999999976 99998876543      899999999999999999999999999999873

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.80  E-value=5.2e-19  Score=173.95  Aligned_cols=126  Identities=18%  Similarity=0.207  Sum_probs=114.1

Q ss_pred             ecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC--hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCC
Q 008813          412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE  489 (552)
Q Consensus       412 i~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s--k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~  489 (552)
                      ..++|++++.||+|+||.||+|.+..+++.||||++...  ....+.+.+|+.+++.++|      +||+++++++....
T Consensus        20 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h------~~i~~~~~~~~~~~   93 (303)
T 3a7i_A           20 PEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDS------PYVTKYYGSYLKDT   93 (303)
T ss_dssp             GGGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCC------TTBCCEEEEEEETT
T ss_pred             hHHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCC------CCEeEEEEEEecCC
Confidence            346899999999999999999999999999999999764  3345778999999999988      99999999999999


Q ss_pred             EEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          490 HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       490 hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      .+||||||+.+ +|.++++...       +++..++.++.||+.||.|||++||+|+||++-
T Consensus        94 ~~~lv~e~~~~~~L~~~~~~~~-------~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~  148 (303)
T 3a7i_A           94 KLWIIMEYLGGGSALDLLEPGP-------LDETQIATILREILKGLDYLHSEKKIHRDIKAA  148 (303)
T ss_dssp             EEEEEEECCTTEEHHHHHTTSC-------CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGG
T ss_pred             eEEEEEEeCCCCcHHHHHhcCC-------CCHHHHHHHHHHHHHHHHHHHHCCCccCCCChh
Confidence            99999999987 9999986532       899999999999999999999999999999873

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.80  E-value=4.3e-19  Score=176.39  Aligned_cols=126  Identities=14%  Similarity=0.120  Sum_probs=114.7

Q ss_pred             cCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC----hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeC
Q 008813          413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND----KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL  488 (552)
Q Consensus       413 ~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s----k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~  488 (552)
                      .++|++.+.||+|+||.||+|.+..+++.||||++...    ....+.+.+|+.+++.++|      |||+++++++...
T Consensus        33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h------p~iv~~~~~~~~~  106 (309)
T 2h34_A           33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQE------PHVVPIHDFGEID  106 (309)
T ss_dssp             -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCC------TTBCCEEEEEEET
T ss_pred             eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCC------CCeeEEEEEEeeC
Confidence            47899999999999999999999999999999999754    2334678899999999998      9999999999999


Q ss_pred             CEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          489 EHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       489 ~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      +.+|||||++.+ +|.++++....      +++..++.++.||+.||.|||++||+|+||++-
T Consensus       107 ~~~~lv~e~~~~~~L~~~l~~~~~------~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~  163 (309)
T 2h34_A          107 GQLYVDMRLINGVDLAAMLRRQGP------LAPPRAVAIVRQIGSALDAAHAAGATHRDVKPE  163 (309)
T ss_dssp             TEEEEEEECCCCEEHHHHHHHHCS------CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGG
T ss_pred             CeEEEEEEecCCCCHHHHHHhcCC------CCHHHHHHHHHHHHHHHHHHHHCcCCcCCCChH
Confidence            999999999987 99999987643      899999999999999999999999999999973

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.80  E-value=4.2e-19  Score=177.76  Aligned_cols=126  Identities=17%  Similarity=0.195  Sum_probs=111.6

Q ss_pred             cCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC---hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCC
Q 008813          413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE  489 (552)
Q Consensus       413 ~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s---k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~  489 (552)
                      .++|++++.||+|+||.||+|++..+++.||||++...   ....+.+.+|+.+++.++|      |||+++++++...+
T Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h------~~iv~~~~~~~~~~   97 (331)
T 4aaa_A           24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRH------ENLVNLLEVCKKKK   97 (331)
T ss_dssp             GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCC------TTBCCEEEEEEETT
T ss_pred             hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCC------CCEeeEEEEeecCC
Confidence            46899999999999999999999999999999998654   3344667899999999998      99999999999999


Q ss_pred             EEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          490 HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       490 hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      .+||||||+.+ .|..++.....      +++..++.|+.||+.||.|||++||||+|||+-
T Consensus        98 ~~~lv~e~~~~~~l~~~~~~~~~------~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~  153 (331)
T 4aaa_A           98 RWYLVFEFVDHTILDDLELFPNG------LDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPE  153 (331)
T ss_dssp             EEEEEEECCSEEHHHHHHHSTTC------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGG
T ss_pred             EEEEEEecCCcchHHHHHhhccC------CCHHHHHHHHHHHHHHHHHHHHCCEEccCcChh
Confidence            99999999998 56655554332      899999999999999999999999999999973

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.80  E-value=3.9e-19  Score=175.55  Aligned_cols=130  Identities=20%  Similarity=0.181  Sum_probs=111.6

Q ss_pred             cCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC-hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEe----
Q 008813          413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND-KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH----  487 (552)
Q Consensus       413 ~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s-k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~----  487 (552)
                      .++|++++.||+|+||.||+|.+..+++.||||++... ....+.+.+|+.+++.++|      |||+++++++..    
T Consensus        28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h------~~iv~~~~~~~~~~~~  101 (317)
T 2buj_A           28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNH------PNILRLVAYCLRERGA  101 (317)
T ss_dssp             TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCC------TTBCCCCEEEEEEETT
T ss_pred             CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCC------CCeeeEEEEEEeccCC
Confidence            36899999999999999999999999999999998653 3455778899999999998      999999999973    


Q ss_pred             CCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          488 LEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       488 ~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      ...+|+||||+.+ +|.+++......+  .++++..++.|+.||+.||.|||++||||+|||+-
T Consensus       102 ~~~~~lv~e~~~~~~L~~~l~~~~~~~--~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dlkp~  163 (317)
T 2buj_A          102 KHEAWLLLPFFKRGTLWNEIERLKDKG--NFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPT  163 (317)
T ss_dssp             EEEEEEEEECCTTCBHHHHHHHHHTTT--CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGG
T ss_pred             CceeEEEEEeCCCCcHHHHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHH
Confidence            3579999999987 9999998743222  23899999999999999999999999999999973

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=99.80  E-value=4.7e-19  Score=172.22  Aligned_cols=128  Identities=19%  Similarity=0.209  Sum_probs=106.9

Q ss_pred             eecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCE
Q 008813          411 VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH  490 (552)
Q Consensus       411 vi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~h  490 (552)
                      .+.++|++.+.||+|+||.||+|++..+++.||||++..... ...+.+|+.+++.++|+     ++|..+..++.....
T Consensus         6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~e~~~l~~l~~~-----~~i~~~~~~~~~~~~   79 (296)
T 4hgt_A            6 RVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK-HPQLHIESKIYKMMQGG-----VGIPTIRWCGAEGDY   79 (296)
T ss_dssp             -----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC----CCCHHHHHHHHHHHTTS-----TTCCCEEEEEEETTE
T ss_pred             ccCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc-chHHHHHHHHHHHhcCC-----CCCCeeeeecCCCCc
Confidence            355799999999999999999999999999999999875432 34678999999999984     556666666678899


Q ss_pred             EEEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          491 LFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       491 LyIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      .+||||+++++|.+++......     +++..++.|+.||+.||.|||++||||+|||+
T Consensus        80 ~~lv~e~~~~~L~~~~~~~~~~-----~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp  133 (296)
T 4hgt_A           80 NVMVMELLGPSLEDLFNFCSRK-----FSLKTVLLLADQMISRIEYIHSKNFIHRDVKP  133 (296)
T ss_dssp             EEEEEECCCCBHHHHHHHTTSC-----CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSG
T ss_pred             eEEEEEccCCCHHHHHHHhcCC-----CCHHHHHHHHHHHHHHHHHHHHCCeecCCCCH
Confidence            9999999977999999865432     89999999999999999999999999999997

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.80  E-value=5.1e-19  Score=174.52  Aligned_cols=128  Identities=18%  Similarity=0.268  Sum_probs=109.3

Q ss_pred             eecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCE
Q 008813          411 VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH  490 (552)
Q Consensus       411 vi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~h  490 (552)
                      ...++|++++.||+|+||.||+|.+..+++.||||++.... ....+.+|+.+++.++|      |||+++++++...+.
T Consensus        26 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~e~~~l~~l~h------~~i~~~~~~~~~~~~   98 (314)
T 3com_A           26 QPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES-DLQEIIKEISIMQQCDS------PHVVKYYGSYFKNTD   98 (314)
T ss_dssp             ----CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS-CCHHHHHHHHHHHTCCC------TTBCCEEEEEEETTE
T ss_pred             cchhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH-HHHHHHHHHHHHHhCCC------CCCccEEEEEEeCCE
Confidence            45678999999999999999999999999999999998653 24678899999999988      999999999999999


Q ss_pred             EEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          491 LFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       491 LyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      +||||||+.+ +|.++++....     ++++..++.++.||+.||.|||++||+|.||++-
T Consensus        99 ~~lv~e~~~~~~L~~~~~~~~~-----~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dl~p~  154 (314)
T 3com_A           99 LWIVMEYCGAGSVSDIIRLRNK-----TLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAG  154 (314)
T ss_dssp             EEEEEECCTTEEHHHHHHHHTC-----CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGG
T ss_pred             EEEEeecCCCCCHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHhCCCcCCCcCHH
Confidence            9999999987 99999985432     2899999999999999999999999999999873

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.80  E-value=1.8e-19  Score=179.44  Aligned_cols=127  Identities=24%  Similarity=0.258  Sum_probs=109.9

Q ss_pred             ceecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecCh---------hhHHHHHHHHHHHHHhcccCCCCCCCeeE
Q 008813          410 TVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK---------DFFDQSLDEIKLLKLVNKNDPADEHHILR  480 (552)
Q Consensus       410 dvi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk---------~~~~~~lrEIkILk~L~hhd~~d~pnIVr  480 (552)
                      ..+.++|++.+.||+|+||.||+|.+..+++.||||++....         .....+.+|+.+|+.++|      |||++
T Consensus         6 ~~l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h------~~i~~   79 (322)
T 2ycf_A            6 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNH------PCIIK   79 (322)
T ss_dssp             HHHHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCC------TTBCC
T ss_pred             hhhhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCC------CCCce
Confidence            345678999999999999999999999999999999997532         122357899999999998      99999


Q ss_pred             eEeEEEeCCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          481 LYDYFYHLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       481 L~d~F~~~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      +++++.... +||||||+.+ +|.+++.....      +++..++.++.||+.||.|||++||||+|||+
T Consensus        80 ~~~~~~~~~-~~lv~e~~~~~~L~~~~~~~~~------~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp  142 (322)
T 2ycf_A           80 IKNFFDAED-YYIVLELMEGGELFDKVVGNKR------LKEATCKLYFYQMLLAVQYLHENGIIHRDLKP  142 (322)
T ss_dssp             EEEEEESSS-EEEEEECCTTEETHHHHSTTCC------CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSG
T ss_pred             EeeEEcCCc-eEEEEecCCCCcHHHHHhccCC------CCHHHHHHHHHHHHHHHHHHHHCCeeccCCCH
Confidence            999987655 8999999987 99998876543      89999999999999999999999999999986

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=99.80  E-value=7.3e-19  Score=171.26  Aligned_cols=129  Identities=19%  Similarity=0.190  Sum_probs=111.5

Q ss_pred             eecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCE
Q 008813          411 VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH  490 (552)
Q Consensus       411 vi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~h  490 (552)
                      .+.++|++.+.||+|+||.||+|++..+++.||||++..... ...+.+|+.+++.++|+     ++|..+..++.....
T Consensus         6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~e~~~l~~l~~~-----~~i~~~~~~~~~~~~   79 (296)
T 3uzp_A            6 RVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK-HPQLHIESKIYKMMQGG-----VGIPTIRWCGAEGDY   79 (296)
T ss_dssp             EETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS-CCHHHHHHHHHHHHTTS-----TTCCCEEEEEEETTE
T ss_pred             eeccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc-hhHHHHHHHHHHHhhcC-----CCCCccccccCCCCc
Confidence            456899999999999999999999999999999999876432 34678999999999984     456666666677889


Q ss_pred             EEEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          491 LFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       491 LyIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      ++|||||++++|.+++.....     ++++..++.|+.||+.||.|||++||||+|||+-
T Consensus        80 ~~lv~e~~~~~L~~~~~~~~~-----~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~  134 (296)
T 3uzp_A           80 NVMVMELLGPSLEDLFNFCSR-----KFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPD  134 (296)
T ss_dssp             EEEEEECCCCBHHHHHHHTTT-----CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGG
T ss_pred             eEEEEEecCCCHHHHHHhhcc-----CCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHH
Confidence            999999997799999985443     2899999999999999999999999999999973

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.80  E-value=4.2e-19  Score=170.49  Aligned_cols=126  Identities=15%  Similarity=0.153  Sum_probs=113.6

Q ss_pred             cCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEEE
Q 008813          413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLF  492 (552)
Q Consensus       413 ~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hLy  492 (552)
                      ..+|++.+.||+|+||.||+|.+. +++.||||+++......+.+.+|+.+++.++|      |||+++++++...+.++
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~h------~~i~~~~~~~~~~~~~~   79 (267)
T 3t9t_A            7 PSELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAMSEEDFIEEAEVMMKLSH------PKLVQLYGVCLEQAPIC   79 (267)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTTBCHHHHHHHHHHHHTCCC------TTBCCEEEEECSSSSCE
T ss_pred             hhheeeeeEecCCCceeEEEEEec-CCCeEEEEEccccCCCHHHHHHHHHHHHhCCC------CCEeeEEEEEccCCCeE
Confidence            468999999999999999999986 57789999998765555778999999999998      99999999999999999


Q ss_pred             EEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          493 IVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       493 IVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      +|||++.+ +|.++++....     .+++..++.++.||+.||.|||++||+|+||++-
T Consensus        80 lv~e~~~~~~L~~~~~~~~~-----~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~  133 (267)
T 3t9t_A           80 LVTEFMEHGCLSDYLRTQRG-----LFAAETLLGMCLDVCEGMAYLEEACVIHRDLAAR  133 (267)
T ss_dssp             EEECCCTTCBHHHHHHHTTT-----CCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGG
T ss_pred             EEEeCCCCCcHHHHHhhCcc-----cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCchh
Confidence            99999976 99999987543     2899999999999999999999999999999973

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.80  E-value=4e-19  Score=182.63  Aligned_cols=132  Identities=20%  Similarity=0.320  Sum_probs=112.8

Q ss_pred             ecCceEEEEEeccCCceEEEEEEEC-------CCCcEEEEEEEecC--hhhHHHHHHHHHHHHHh-cccCCCCCCCeeEe
Q 008813          412 IAGRYYVTEYLGSAAFSKVFQAQDL-------HTGVDVCLKIIKND--KDFFDQSLDEIKLLKLV-NKNDPADEHHILRL  481 (552)
Q Consensus       412 i~~RY~Ile~LGkG~FG~VykA~Dk-------ktg~~VAVKIIk~s--k~~~~~~lrEIkILk~L-~hhd~~d~pnIVrL  481 (552)
                      ..++|++.+.||+|+||.||+|.+.       .++..||||+++..  ......+.+|+.+|+.+ +|      |||+++
T Consensus        79 ~~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h------pnIv~~  152 (370)
T 2psq_A           79 PRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH------KNIINL  152 (370)
T ss_dssp             CGGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCC------TTBCCE
T ss_pred             cHHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCC------CCEeeE
Confidence            4578999999999999999999874       34567999999764  33456789999999999 56      999999


Q ss_pred             EeEEEeCCEEEEEEecCCC-CHHHHHHhhccCC----------CCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          482 YDYFYHLEHLFIVCELLRA-NLYEFQKFNQESG----------GEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       482 ~d~F~~~~hLyIVmEll~G-sL~d~Lk~~~~~g----------~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ++++...+.+||||||+.+ +|.++++.....+          ....+++..++.|+.||+.||.|||++||||+|||+
T Consensus       153 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp  231 (370)
T 2psq_A          153 LGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAA  231 (370)
T ss_dssp             EEEECSSSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCG
T ss_pred             EEEEccCCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeccccch
Confidence            9999999999999999987 9999998764210          112389999999999999999999999999999997

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.80  E-value=3e-19  Score=175.41  Aligned_cols=133  Identities=21%  Similarity=0.284  Sum_probs=114.0

Q ss_pred             eecCceEEEEEeccCCceEEEEEEEC-----CCCcEEEEEEEecC--hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEe
Q 008813          411 VIAGRYYVTEYLGSAAFSKVFQAQDL-----HTGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYD  483 (552)
Q Consensus       411 vi~~RY~Ile~LGkG~FG~VykA~Dk-----ktg~~VAVKIIk~s--k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d  483 (552)
                      ....+|.+.+.||+|+||.||+|.+.     .+++.||||+++..  ....+.+.+|+++|+.++|      |||+++++
T Consensus        20 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h------p~iv~~~~   93 (314)
T 2ivs_A           20 FPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNH------PHVIKLYG   93 (314)
T ss_dssp             CCGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCC------TTBCCEEE
T ss_pred             cchhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCC------CceeeEEE
Confidence            44578999999999999999999983     45589999999764  3345678899999999988      99999999


Q ss_pred             EEEeCCEEEEEEecCCC-CHHHHHHhhccCC------------------CCcCCCHHHHHHHHHHHHHHHHHHHhCCCee
Q 008813          484 YFYHLEHLFIVCELLRA-NLYEFQKFNQESG------------------GEAYFTLGRLQVCSTFLLTLLMLIFLLLVIY  544 (552)
Q Consensus       484 ~F~~~~hLyIVmEll~G-sL~d~Lk~~~~~g------------------~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH  544 (552)
                      ++...+.++|||||+.+ +|.+++......+                  ....+++..++.|+.||+.||.|||++||||
T Consensus        94 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH  173 (314)
T 2ivs_A           94 ACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVH  173 (314)
T ss_dssp             EECSSSSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred             EEecCCceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCCCcc
Confidence            99999999999999986 9999998754311                  0123899999999999999999999999999


Q ss_pred             eeccc
Q 008813          545 FILFC  549 (552)
Q Consensus       545 ~~L~~  549 (552)
                      +|||+
T Consensus       174 ~dikp  178 (314)
T 2ivs_A          174 RDLAA  178 (314)
T ss_dssp             CCCSG
T ss_pred             cccch
Confidence            99997

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.80  E-value=3.1e-19  Score=176.68  Aligned_cols=140  Identities=15%  Similarity=0.115  Sum_probs=117.0

Q ss_pred             ceeeCceecCceEEEEEeccCCceEEEEEEEC-----CCCcEEEEEEEecCh--hhHHHHHHHHHHHHHhcccCCCCCCC
Q 008813          405 PIILNTVIAGRYYVTEYLGSAAFSKVFQAQDL-----HTGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHH  477 (552)
Q Consensus       405 ~v~~gdvi~~RY~Ile~LGkG~FG~VykA~Dk-----ktg~~VAVKIIk~sk--~~~~~~lrEIkILk~L~hhd~~d~pn  477 (552)
                      ......+..++|++.+.||+|+||.||+|.+.     .+++.||||++....  .....+.+|+.+++.++|      +|
T Consensus        16 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h------~~   89 (322)
T 1p4o_A           16 VPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNC------HH   89 (322)
T ss_dssp             CCCTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCC------TT
T ss_pred             ChhhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCC------CC
Confidence            33344567789999999999999999999876     357889999997542  234568899999999998      99


Q ss_pred             eeEeEeEEEeCCEEEEEEecCCC-CHHHHHHhhccC----CCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          478 ILRLYDYFYHLEHLFIVCELLRA-NLYEFQKFNQES----GGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       478 IVrL~d~F~~~~hLyIVmEll~G-sL~d~Lk~~~~~----g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      |+++++++...+.++|||||+.+ +|.++++.....    ....++++..++.|+.||+.||.|||++||+|+|||+-
T Consensus        90 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~  167 (322)
T 1p4o_A           90 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAAR  167 (322)
T ss_dssp             BCCEEEEECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGG
T ss_pred             EeeeEEEEccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCCCccCCCccc
Confidence            99999999999999999999986 999999864320    01123799999999999999999999999999999973

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=99.79  E-value=4.7e-19  Score=180.08  Aligned_cols=132  Identities=17%  Similarity=0.185  Sum_probs=109.8

Q ss_pred             ecCceEEEEEeccCCceEEEEE-----EECCCCcEEEEEEEecChhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEE
Q 008813          412 IAGRYYVTEYLGSAAFSKVFQA-----QDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFY  486 (552)
Q Consensus       412 i~~RY~Ile~LGkG~FG~VykA-----~Dkktg~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~  486 (552)
                      ..++|.+.+.||+|+||.||+|     .+..+++.||||+++...  ...+.+|+.+++.+++.   .++||+++++++.
T Consensus        63 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~e~~~~~~l~~~---~~~~iv~~~~~~~  137 (365)
T 3e7e_A           63 GSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN--PWEFYIGTQLMERLKPS---MQHMFMKFYSAHL  137 (365)
T ss_dssp             SSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCC--HHHHHHHHHHHHHSCGG---GGGGBCCEEEEEE
T ss_pred             CCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCC--hhHHHHHHHHHHHhhhh---hhhhhhhhheeee
Confidence            4578999999999999999999     467789999999997643  35678889988888731   2289999999999


Q ss_pred             eCCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          487 HLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       487 ~~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ..+..||||||+.+ +|.+++...... ....+++..++.|+.||+.||.|||++||||+|||+
T Consensus       138 ~~~~~~lv~e~~~~g~L~~~l~~~~~~-~~~~l~~~~~~~i~~qi~~~L~~lH~~~ivHrDiKp  200 (365)
T 3e7e_A          138 FQNGSVLVGELYSYGTLLNAINLYKNT-PEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKP  200 (365)
T ss_dssp             CSSCEEEEECCCCSCBHHHHHHHHHTS-TTCSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSG
T ss_pred             cCCCcEEEEeccCCCcHHHHHHHhhcc-cccCCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCH
Confidence            99999999999986 999999864321 112399999999999999999999999999999997

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.79  E-value=5.8e-19  Score=173.35  Aligned_cols=134  Identities=20%  Similarity=0.196  Sum_probs=114.5

Q ss_pred             eecCceEEEEEeccCCceEEEEEEE-----CCCCcEEEEEEEecCh--hhHHHHHHHHHHHHHh-cccCCCCCCCeeEeE
Q 008813          411 VIAGRYYVTEYLGSAAFSKVFQAQD-----LHTGVDVCLKIIKNDK--DFFDQSLDEIKLLKLV-NKNDPADEHHILRLY  482 (552)
Q Consensus       411 vi~~RY~Ile~LGkG~FG~VykA~D-----kktg~~VAVKIIk~sk--~~~~~~lrEIkILk~L-~hhd~~d~pnIVrL~  482 (552)
                      ...++|++.+.||+|+||.||+|.+     ..+++.||||+++...  ...+.+.+|+.+|+.+ +|      |||++++
T Consensus        20 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h------~~i~~~~   93 (313)
T 1t46_A           20 FPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNH------MNIVNLL   93 (313)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCC------TTBCCEE
T ss_pred             cChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccC------CCeeeEE
Confidence            4457899999999999999999985     4567899999998642  3356788999999999 66      9999999


Q ss_pred             eEEEeCCEEEEEEecCCC-CHHHHHHhhccC------------CCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          483 DYFYHLEHLFIVCELLRA-NLYEFQKFNQES------------GGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       483 d~F~~~~hLyIVmEll~G-sL~d~Lk~~~~~------------g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      +++...+.++|||||+.+ +|.+++......            ....++++..++.++.||+.||.|||++||+|+|||+
T Consensus        94 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp  173 (313)
T 1t46_A           94 GACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAA  173 (313)
T ss_dssp             EEECSSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSG
T ss_pred             EEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCcc
Confidence            999999999999999987 999999876421            0112389999999999999999999999999999997


Q ss_pred             c
Q 008813          550 F  550 (552)
Q Consensus       550 ~  550 (552)
                      -
T Consensus       174 ~  174 (313)
T 1t46_A          174 R  174 (313)
T ss_dssp             G
T ss_pred             c
Confidence            3

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.79  E-value=5e-19  Score=195.04  Aligned_cols=129  Identities=19%  Similarity=0.175  Sum_probs=115.8

Q ss_pred             eecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecCh----hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEE
Q 008813          411 VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFY  486 (552)
Q Consensus       411 vi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk----~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~  486 (552)
                      +..++|++++.||+|+||.||+|+++.+++.||||++.+..    .....+.+|+.+|+.++|      ||||+++++|.
T Consensus       181 ~~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~h------p~Iv~l~~~~~  254 (576)
T 2acx_A          181 VTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNS------RFVVSLAYAYE  254 (576)
T ss_dssp             CCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCC------TTBCCEEEEEE
T ss_pred             ccccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCC------CCEeeEEEEEe
Confidence            45578999999999999999999999999999999997642    234567899999999998      99999999999


Q ss_pred             eCCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          487 HLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       487 ~~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ..+++||||||+.+ +|.+++.......    +++..++.|+.||+.||.|||++||||+|||+
T Consensus       255 ~~~~l~lVmEy~~gg~L~~~l~~~~~~~----l~e~~~~~i~~qIl~aL~yLH~~gIvHrDLKP  314 (576)
T 2acx_A          255 TKDALCLVLTLMNGGDLKFHIYHMGQAG----FPEARAVFYAAEICCGLEDLHRERIVYRDLKP  314 (576)
T ss_dssp             CSSEEEEEECCCCSCBHHHHHHSSSSCC----CCHHHHHHHHHHHHHHHHHHHHTTEECCCCCG
T ss_pred             eCCEEEEEEEcCCCCcHHHHHHhcCCCC----CCHHHHHHHHHHHHHHHHHHHHCCEeccCCch
Confidence            99999999999976 9999998755433    89999999999999999999999999999997

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.79  E-value=3.6e-19  Score=176.67  Aligned_cols=133  Identities=16%  Similarity=0.147  Sum_probs=104.1

Q ss_pred             eecCceEEEEEeccCCceEEEEEEECCCCc---EEEEEEEecC---hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeE
Q 008813          411 VIAGRYYVTEYLGSAAFSKVFQAQDLHTGV---DVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDY  484 (552)
Q Consensus       411 vi~~RY~Ile~LGkG~FG~VykA~Dkktg~---~VAVKIIk~s---k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~  484 (552)
                      +..++|++.+.||+|+||.||+|++..++.   .||||+++..   ....+.+.+|+++++.++|      |||++++++
T Consensus        20 i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h------~~iv~~~~~   93 (323)
T 3qup_A           20 IPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDH------PHVAKLVGV   93 (323)
T ss_dssp             CC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCC------TTBCCCCEE
T ss_pred             cChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCC------Cceehhhce
Confidence            455789999999999999999999887765   8999999763   3345678899999999988      999999999


Q ss_pred             EEeCCEE------EEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          485 FYHLEHL------FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       485 F~~~~hL------yIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      +......      ++||||+.+ +|.+++..........++++..++.|+.||+.||.|||++||||+|||+
T Consensus        94 ~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~Dikp  165 (323)
T 3qup_A           94 SLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAA  165 (323)
T ss_dssp             EECC-------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSG
T ss_pred             eeccccccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCCcccCCCCc
Confidence            9877654      999999987 9999998655322223489999999999999999999999999999997

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.79  E-value=1.6e-19  Score=182.95  Aligned_cols=126  Identities=22%  Similarity=0.235  Sum_probs=113.4

Q ss_pred             ecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChh---------hHHHHHHHHHHHHHhcccCCCCCCCeeEeE
Q 008813          412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD---------FFDQSLDEIKLLKLVNKNDPADEHHILRLY  482 (552)
Q Consensus       412 i~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~---------~~~~~lrEIkILk~L~hhd~~d~pnIVrL~  482 (552)
                      +.++|++++.||+|+||.||+|.+..+++.||||+++....         ....+.+|+.+|+.++|      |||++++
T Consensus        22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h------~~Iv~~~   95 (335)
T 3dls_A           22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEH------ANIIKVL   95 (335)
T ss_dssp             HHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCC------TTBCCEE
T ss_pred             cccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCC------CCEeeEE
Confidence            45789999999999999999999999999999999986421         23456789999999988      9999999


Q ss_pred             eEEEeCCEEEEEEecCC-C-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          483 DYFYHLEHLFIVCELLR-A-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       483 d~F~~~~hLyIVmEll~-G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ++|...+.++||||++. + +|.++++....      +++..++.|+.||+.||.|||++||||+|||+
T Consensus        96 ~~~~~~~~~~lv~e~~~~g~~l~~~~~~~~~------l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp  158 (335)
T 3dls_A           96 DIFENQGFFQLVMEKHGSGLDLFAFIDRHPR------LDEPLASYIFRQLVSAVGYLRLKDIIHRDIKD  158 (335)
T ss_dssp             EEEECSSEEEEEEECCTTSCBHHHHHHTCCC------CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSG
T ss_pred             EEEeeCCEEEEEEEeCCCCccHHHHHHhcCC------CCHHHHHHHHHHHHHHHHHHHhCCeEEeccCH
Confidence            99999999999999875 4 99999987643      89999999999999999999999999999997

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=99.79  E-value=6.2e-19  Score=179.41  Aligned_cols=130  Identities=15%  Similarity=0.145  Sum_probs=103.5

Q ss_pred             ecCceEEEEEeccCCceEEEEEEECCC-----CcEEEEEEEecChhhHHHHHHHHHHHHHhcc---------cCCCCCCC
Q 008813          412 IAGRYYVTEYLGSAAFSKVFQAQDLHT-----GVDVCLKIIKNDKDFFDQSLDEIKLLKLVNK---------NDPADEHH  477 (552)
Q Consensus       412 i~~RY~Ile~LGkG~FG~VykA~Dkkt-----g~~VAVKIIk~sk~~~~~~lrEIkILk~L~h---------hd~~d~pn  477 (552)
                      ..++|++++.||+|+||.||+|.+..+     ++.||||++.....   ...+|+++++.+.+         .....|+|
T Consensus        33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~  109 (364)
T 3op5_A           33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNG---PLFTELKFYQRAAKPEQIQKWIRTRKLKYLG  109 (364)
T ss_dssp             TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCH---HHHHHHHHHHHHCCHHHHHHHHHHTTCSCCC
T ss_pred             CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccch---hHHHHHHHHHhhhhhHHHHHHHHHhhccCCC
Confidence            345999999999999999999998764     58899999986532   33445554444432         11222399


Q ss_pred             eeEeEeEEEeC----CEEEEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          478 ILRLYDYFYHL----EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       478 IVrL~d~F~~~----~hLyIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      |+++++++...    .++||||||++++|.++++....     ++++..++.|+.||+.||.|||++||||+|||+
T Consensus       110 iv~~~~~~~~~~~~~~~~~lv~e~~g~~L~~~~~~~~~-----~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp  180 (364)
T 3op5_A          110 VPKYWGSGLHDKNGKSYRFMIMDRFGSDLQKIYEANAK-----RFSRKTVLQLSLRILDILEYIHEHEYVHGDIKA  180 (364)
T ss_dssp             SCCEEEEEEEEETTEEEEEEEEECEEEEHHHHHHHTTS-----CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCG
T ss_pred             CCeEEeeeeeccCCcceEEEEEeCCCCCHHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHHCCeEEecCCH
Confidence            99999999865    56999999996699999987532     289999999999999999999999999999997

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.79  E-value=9.7e-19  Score=174.51  Aligned_cols=125  Identities=20%  Similarity=0.193  Sum_probs=111.5

Q ss_pred             CceEEEEEeccCCceEEEEEE----ECCCCcEEEEEEEecC-hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEE--
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQ----DLHTGVDVCLKIIKND-KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFY--  486 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~----Dkktg~~VAVKIIk~s-k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~--  486 (552)
                      .+|++++.||+|+||.||+|+    +..+++.||||++... ....+.+.+|+++|+.++|      +||+++++++.  
T Consensus        23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h------~~i~~~~~~~~~~   96 (327)
T 3lxl_A           23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHS------DFIVKYRGVSYGP   96 (327)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCC------TTBCCEEEEEECS
T ss_pred             hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCC------CceeEEEEEEecC
Confidence            689999999999999999998    5678999999999765 3345678999999999988      99999999987  


Q ss_pred             eCCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          487 HLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       487 ~~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ....+||||||+.+ +|.++++.....     +++..++.|+.||+.||.|||++||||+|||+
T Consensus        97 ~~~~~~lv~e~~~~~~L~~~l~~~~~~-----~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp  155 (327)
T 3lxl_A           97 GRQSLRLVMEYLPSGCLRDFLQRHRAR-----LDASRLLLYSSQICKGMEYLGSRRCVHRDLAA  155 (327)
T ss_dssp             SSCEEEEEEECCTTCBHHHHHHHHGGG-----CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSG
T ss_pred             CCceEEEEEeecCCCCHHHHHHhcccC-----CCHHHHHHHHHHHHHHHHHHHhCCccCCCCCh
Confidence            45779999999966 999999875432     89999999999999999999999999999997

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.79  E-value=1.1e-18  Score=172.80  Aligned_cols=129  Identities=21%  Similarity=0.212  Sum_probs=114.0

Q ss_pred             ceecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC---hhhHHHHHHHHHHHHHhcc-cCCCCCCCeeEeEeEE
Q 008813          410 TVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNK-NDPADEHHILRLYDYF  485 (552)
Q Consensus       410 dvi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s---k~~~~~~lrEIkILk~L~h-hd~~d~pnIVrL~d~F  485 (552)
                      .+..++|++++.||+|+||.||+|.+. +++.||||++...   ....+.+.+|+.+++.++| +     +||+++++++
T Consensus        24 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~-----~~iv~~~~~~   97 (313)
T 3cek_A           24 SVKGRIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS-----DKIIRLYDYE   97 (313)
T ss_dssp             EETTEEEEEEEEEECCSSEEEEEEECT-TCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGC-----TTBCCEEEEE
T ss_pred             eeccceEEEEEEecCCCCEEEEEEEcC-CCcEEEEEEeccccccccchHHHHHHHHHHHhccccC-----CceEEEEEEe
Confidence            345578999999999999999999985 4889999999753   3345778899999999986 4     8999999999


Q ss_pred             EeCCEEEEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          486 YHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       486 ~~~~hLyIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      ...+++|||||+.+++|.++++....      +++..++.|+.||+.||.|||++||+|+|||+-
T Consensus        98 ~~~~~~~lv~e~~~~~L~~~l~~~~~------~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~  156 (313)
T 3cek_A           98 ITDQYIYMVMECGNIDLNSWLKKKKS------IDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPA  156 (313)
T ss_dssp             ECSSEEEEEECCCSEEHHHHHHHCSS------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGG
T ss_pred             ecCCEEEEEEecCCCcHHHHHHhcCC------CCHHHHHHHHHHHHHHHHHHHHCCceecCCCcc
Confidence            99999999999777799999987543      899999999999999999999999999999973

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.79  E-value=4.4e-19  Score=180.82  Aligned_cols=128  Identities=18%  Similarity=0.268  Sum_probs=112.7

Q ss_pred             ecCceEEEEEeccCCceEEEEEEEC---CCCcEEEEEEEecC-----hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEe
Q 008813          412 IAGRYYVTEYLGSAAFSKVFQAQDL---HTGVDVCLKIIKND-----KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYD  483 (552)
Q Consensus       412 i~~RY~Ile~LGkG~FG~VykA~Dk---ktg~~VAVKIIk~s-----k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d  483 (552)
                      ..++|++++.||+|+||.||+|++.   .+++.||||+++..     ......+.+|+.+|+.+.+|     +||+++++
T Consensus        52 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h-----~~iv~~~~  126 (355)
T 1vzo_A           52 GIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQS-----PFLVTLHY  126 (355)
T ss_dssp             CGGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTC-----TTBCCEEE
T ss_pred             cccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCC-----CceeEEEE
Confidence            3468999999999999999999985   58899999998753     12345677899999999654     99999999


Q ss_pred             EEEeCCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          484 YFYHLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       484 ~F~~~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      ++...+.+||||||+.+ +|.+++.....      +++..++.++.||+.||.|||++||||+|||+-
T Consensus       127 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~------~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~  188 (355)
T 1vzo_A          127 AFQTETKLHLILDYINGGELFTHLSQRER------FTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLE  188 (355)
T ss_dssp             EEEETTEEEEEECCCCSCBHHHHHHHHSC------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGG
T ss_pred             EEeeCceEEEEeecCCCCCHHHHHHHcCC------CCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHH
Confidence            99999999999999987 99999987653      899999999999999999999999999999973

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.79  E-value=8.5e-19  Score=180.14  Aligned_cols=134  Identities=19%  Similarity=0.285  Sum_probs=114.6

Q ss_pred             ceecCceEEEEEeccCCceEEEEEEECCC-------CcEEEEEEEecC--hhhHHHHHHHHHHHHHh-cccCCCCCCCee
Q 008813          410 TVIAGRYYVTEYLGSAAFSKVFQAQDLHT-------GVDVCLKIIKND--KDFFDQSLDEIKLLKLV-NKNDPADEHHIL  479 (552)
Q Consensus       410 dvi~~RY~Ile~LGkG~FG~VykA~Dkkt-------g~~VAVKIIk~s--k~~~~~~lrEIkILk~L-~hhd~~d~pnIV  479 (552)
                      .+..++|.+.+.||+|+||.||+|.+..+       +..||||+++..  ......+.+|+++++.+ +|      ||||
T Consensus        65 ~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h------pnIv  138 (382)
T 3tt0_A           65 ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH------KNII  138 (382)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCC------TTBC
T ss_pred             ccchhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCC------chhh
Confidence            45568999999999999999999997533       357999999864  33456788999999999 66      9999


Q ss_pred             EeEeEEEeCCEEEEEEecCCC-CHHHHHHhhccCC----------CCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecc
Q 008813          480 RLYDYFYHLEHLFIVCELLRA-NLYEFQKFNQESG----------GEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILF  548 (552)
Q Consensus       480 rL~d~F~~~~hLyIVmEll~G-sL~d~Lk~~~~~g----------~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~  548 (552)
                      ++++++...+.+||||||+.+ +|.++++.....+          ....+++..++.|+.||+.||.|||++||||+|||
T Consensus       139 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlk  218 (382)
T 3tt0_A          139 NLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLA  218 (382)
T ss_dssp             CEEEEECSSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCC
T ss_pred             hheeeeccCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCEecCCCC
Confidence            999999999999999999977 9999998765211          01238999999999999999999999999999999


Q ss_pred             c
Q 008813          549 C  549 (552)
Q Consensus       549 ~  549 (552)
                      +
T Consensus       219 p  219 (382)
T 3tt0_A          219 A  219 (382)
T ss_dssp             G
T ss_pred             c
Confidence            7

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.79  E-value=6.6e-19  Score=171.73  Aligned_cols=129  Identities=19%  Similarity=0.211  Sum_probs=111.5

Q ss_pred             ceecCceEEEEEeccCCceEEEEEEECCC---CcEEEEEEEecC--hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeE
Q 008813          410 TVIAGRYYVTEYLGSAAFSKVFQAQDLHT---GVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDY  484 (552)
Q Consensus       410 dvi~~RY~Ile~LGkG~FG~VykA~Dkkt---g~~VAVKIIk~s--k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~  484 (552)
                      ++..++|++.+.||+|+||.||+|.+..+   +..||||+++..  ....+.+.+|+.+++.++|      |||++++++
T Consensus        11 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h------~~iv~~~~~   84 (281)
T 1mp8_A           11 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDH------PHIVKLIGV   84 (281)
T ss_dssp             BCCGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCC------TTBCCEEEE
T ss_pred             EEehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCC------CccceEEEE
Confidence            34567999999999999999999998753   567999998753  3345678899999999998      999999999


Q ss_pred             EEeCCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          485 FYHLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       485 F~~~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      +. .+.+||||||+.+ +|.+++.....     .+++..++.++.||+.||.|||++||||+|||+-
T Consensus        85 ~~-~~~~~lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~  145 (281)
T 1mp8_A           85 IT-ENPVWIIMELCTLGELRSFLQVRKY-----SLDLASLILYAYQLSTALAYLESKRFVHRDIAAR  145 (281)
T ss_dssp             EC-SSSCEEEEECCTTEEHHHHHHHTTT-----TSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGG
T ss_pred             Ec-cCccEEEEecCCCCCHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHhCCeecccccHH
Confidence            74 5678999999987 99999986542     2899999999999999999999999999999973

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=99.79  E-value=1.6e-19  Score=182.55  Aligned_cols=128  Identities=26%  Similarity=0.299  Sum_probs=108.3

Q ss_pred             ecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecCh------hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEE
Q 008813          412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK------DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYF  485 (552)
Q Consensus       412 i~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk------~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F  485 (552)
                      ..++|++++.||+|+||.||+|.+..+++.||||+++...      .....+.+|+.+++.++|      |||++++++|
T Consensus         8 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h------~~iv~~~~~~   81 (346)
T 1ua2_A            8 RAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSH------PNIIGLLDAF   81 (346)
T ss_dssp             -----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCC------TTBCCEEEEE
T ss_pred             HhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCC------CCCCeEEEEE
Confidence            3578999999999999999999999999999999997531      123467899999999998      9999999999


Q ss_pred             EeCCEEEEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          486 YHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       486 ~~~~hLyIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      ...+.++|||||+.++|.++++....     .+++..++.++.||+.||.|||++||||+|||+-
T Consensus        82 ~~~~~~~lv~e~~~~~l~~~~~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~  141 (346)
T 1ua2_A           82 GHKSNISLVFDFMETDLEVIIKDNSL-----VLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPN  141 (346)
T ss_dssp             CCTTCCEEEEECCSEEHHHHHTTCCS-----SCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGG
T ss_pred             eeCCceEEEEEcCCCCHHHHHHhcCc-----CCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHH
Confidence            99999999999999999998876542     2899999999999999999999999999999973

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.79  E-value=2.6e-19  Score=171.45  Aligned_cols=127  Identities=10%  Similarity=0.078  Sum_probs=112.2

Q ss_pred             eecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC---hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEe
Q 008813          411 VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH  487 (552)
Q Consensus       411 vi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s---k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~  487 (552)
                      +..++|++.+.||+|+||.||+|++.  ++.||||+++..   ....+.+.+|+.+++.++|      |||+++++++..
T Consensus         7 i~~~~y~~~~~lg~G~~g~V~~~~~~--~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h------~~iv~~~~~~~~   78 (271)
T 3kmu_A            7 IDFKQLNFLTKLNENHSGELWKGRWQ--GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSH------PNVLPVLGACQS   78 (271)
T ss_dssp             CCGGGCEEEEEEEEETTEEEEEEEET--TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSC------TTEECEEEEECT
T ss_pred             CCHHHhHHHHHhcCCCcceEEEEEEC--CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCC------CchhheEEEEcc
Confidence            34578999999999999999999985  788999999864   2344678899999999988      999999999987


Q ss_pred             C--CEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCC--Ceeeeccc
Q 008813          488 L--EHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLL--VIYFILFC  549 (552)
Q Consensus       488 ~--~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~g--IIH~~L~~  549 (552)
                      .  ++++|||||+.+ +|.++++.....    ++++..++.|+.||+.||.|||+++  |+|+|||+
T Consensus        79 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~----~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp  141 (271)
T 3kmu_A           79 PPAPHPTLITHWMPYGSLYNVLHEGTNF----VVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNS  141 (271)
T ss_dssp             TTSSSCEEEEECCTTCBHHHHHHSCSSC----CCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCSG
T ss_pred             CCCCCeEeeecccCCCcHHHHHhhcccC----CCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCcc
Confidence            7  789999999986 999999875432    3899999999999999999999999  99999987

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.79  E-value=4.6e-19  Score=177.34  Aligned_cols=129  Identities=18%  Similarity=0.193  Sum_probs=113.1

Q ss_pred             ceecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC---hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEE
Q 008813          410 TVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFY  486 (552)
Q Consensus       410 dvi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s---k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~  486 (552)
                      ++...+|++.+.||+|+||.||+|++  +++.||||++...   ....+.+.+|+++|+.++|      |||+++++++.
T Consensus        33 ~i~~~~y~i~~~lG~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h------p~iv~~~~~~~  104 (309)
T 3p86_A           33 DIPWCDLNIKEKIGAGSFGTVHRAEW--HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRH------PNIVLFMGAVT  104 (309)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEE--TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCC------TTBCCEEEEEC
T ss_pred             cCChhHceeeeEeecCCCeEEEEEEE--CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCC------CCEeeEEEEEE
Confidence            34567899999999999999999987  5788999999764   3344678899999999998      99999999999


Q ss_pred             eCCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCC--Ceeeeccc
Q 008813          487 HLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLL--VIYFILFC  549 (552)
Q Consensus       487 ~~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~g--IIH~~L~~  549 (552)
                      ..+.++|||||+.+ +|.+++......   ..+++..++.|+.||+.||.|||++|  |||+|||+
T Consensus       105 ~~~~~~lv~e~~~~~~L~~~l~~~~~~---~~~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp  167 (309)
T 3p86_A          105 QPPNLSIVTEYLSRGSLYRLLHKSGAR---EQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKS  167 (309)
T ss_dssp             STTCCEEEEECCTTCBHHHHHHSTTHH---HHSCHHHHHHHHHHHHHHHHHHHTSSSCCCCTTCCG
T ss_pred             ECCceEEEEecCCCCcHHHHHhhcCCC---CCCCHHHHHHHHHHHHHHHHHHHcCCCCEECCCCCh
Confidence            99999999999987 999999864321   12899999999999999999999999  99999996

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.79  E-value=7.3e-19  Score=175.42  Aligned_cols=135  Identities=16%  Similarity=0.102  Sum_probs=111.3

Q ss_pred             ceecCceEEEEEeccCCceEEEEEE-----ECCCCcEEEEEEEecC--hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeE
Q 008813          410 TVIAGRYYVTEYLGSAAFSKVFQAQ-----DLHTGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLY  482 (552)
Q Consensus       410 dvi~~RY~Ile~LGkG~FG~VykA~-----Dkktg~~VAVKIIk~s--k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~  482 (552)
                      ++..++|++++.||+|+||.||+|.     +..+++.||||++...  ......+.+|+.+++.++|      |||++++
T Consensus        26 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h------~~iv~~~   99 (327)
T 2yfx_A           26 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNH------QNIVRCI   99 (327)
T ss_dssp             BCCGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCC------TTBCCEE
T ss_pred             cCChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCC------CCCCeEE
Confidence            4566899999999999999999999     5567889999999653  3344678899999999988      9999999


Q ss_pred             eEEEeCCEEEEEEecCCC-CHHHHHHhhccCCC-CcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          483 DYFYHLEHLFIVCELLRA-NLYEFQKFNQESGG-EAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       483 d~F~~~~hLyIVmEll~G-sL~d~Lk~~~~~g~-~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      +++.....+||||||+.+ +|.+++........ ...+++..++.++.||+.||.|||++||+|+|||+-
T Consensus       100 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~i~H~dlkp~  169 (327)
T 2yfx_A          100 GVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAAR  169 (327)
T ss_dssp             EEECSSSSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGG
T ss_pred             EEEcCCCCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeecCcCCHh
Confidence            999999999999999966 99999987642111 123899999999999999999999999999999973

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.79  E-value=5.5e-19  Score=171.42  Aligned_cols=129  Identities=22%  Similarity=0.227  Sum_probs=112.2

Q ss_pred             ceecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCC
Q 008813          410 TVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE  489 (552)
Q Consensus       410 dvi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~  489 (552)
                      .+..++|++++.||+|+||.||+|.+. +++.||||+++......+.+.+|+++|+.++|      |||+++++++. .+
T Consensus         9 ~v~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h------~~i~~~~~~~~-~~   80 (279)
T 1qpc_A            9 EVPRETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQGSMSPDAFLAEANLMKQLQH------QRLVRLYAVVT-QE   80 (279)
T ss_dssp             BCCGGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTSSCHHHHHHHHHHHHHCCC------TTBCCEEEEEC-SS
T ss_pred             ccCHHhhhheeeecCCCCeEEEEEEEc-CCcEEEEEEecCCcccHHHHHHHHHHHHhCCC------cCcceEEEEEc-CC
Confidence            456689999999999999999999975 56789999998765456788999999999998      99999999876 55


Q ss_pred             EEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          490 HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       490 hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      .+++|||++.+ +|.++++......    +++..++.++.||+.||.|||++||+|+||++-
T Consensus        81 ~~~~v~e~~~~~~L~~~l~~~~~~~----~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~  138 (279)
T 1qpc_A           81 PIYIITEYMENGSLVDFLKTPSGIK----LTINKLLDMAAQIAEGMAFIEERNYIHRDLRAA  138 (279)
T ss_dssp             SCEEEEECCTTCBHHHHTTSHHHHT----CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGG
T ss_pred             CcEEEEecCCCCCHHHHHhcCCCCC----CCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHh
Confidence            68999999976 9999997654222    899999999999999999999999999999863

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.79  E-value=8.9e-19  Score=175.88  Aligned_cols=123  Identities=15%  Similarity=0.205  Sum_probs=111.0

Q ss_pred             ceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecCh-hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEEEE
Q 008813          415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK-DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFI  493 (552)
Q Consensus       415 RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk-~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hLyI  493 (552)
                      .|...+.||+|+||.||+|++..+++.||||+++... ...+.+.+|+.+++.++|      +||+++++++...+.+||
T Consensus        46 ~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h------~niv~~~~~~~~~~~~~l  119 (321)
T 2c30_A           46 LLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQH------FNVVEMYKSYLVGEELWV  119 (321)
T ss_dssp             HEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCC------TTBCCEEEEEEETTEEEE
T ss_pred             hhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCC------CCcceEEEEEEECCEEEE
Confidence            5788889999999999999999999999999998643 234678899999999998      999999999999999999


Q ss_pred             EEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          494 VCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       494 VmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      ||||+.+ +|.+++....       +++..++.++.||+.||.|||++||+|+|||+-
T Consensus       120 v~e~~~~~~L~~~l~~~~-------l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~  170 (321)
T 2c30_A          120 LMEFLQGGALTDIVSQVR-------LNEEQIATVCEAVLQALAYLHAQGVIHRDIKSD  170 (321)
T ss_dssp             EECCCCSCBHHHHHTTCC-------CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGG
T ss_pred             EEecCCCCCHHHHHHhcC-------CCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHH
Confidence            9999977 9999886532       899999999999999999999999999999973

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.79  E-value=4.6e-19  Score=177.44  Aligned_cols=121  Identities=17%  Similarity=0.072  Sum_probs=108.4

Q ss_pred             CceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeC----C
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL----E  489 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~----~  489 (552)
                      .+|++++.||+|+||.||+|++.  ++.||||+++..........+|+.+|+.++|      |||+++++++...    .
T Consensus        24 ~~y~~~~~lg~G~~g~Vy~~~~~--~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h------pniv~~~~~~~~~~~~~~   95 (322)
T 3soc_A           24 MPLQLLEVKARGRFGCVWKAQLL--NEYVAVKIFPIQDKQSWQNEYEVYSLPGMKH------ENILQFIGAEKRGTSVDV   95 (322)
T ss_dssp             EEEEEEEEEECSTTCEEEEEEET--TEEEEEEEECGGGHHHHHHHHHHHTSTTCCC------TTBCCEEEEEEEECSSSE
T ss_pred             hhchhhheecccCceEEEEEEEC--CCEEEEEEeecCchHHHHHHHHHHHHhcCCC------CCchhhcceeccCCCCCc
Confidence            68999999999999999999875  7899999998765555666789999999998      9999999999874    3


Q ss_pred             EEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhC----------CCeeeeccc
Q 008813          490 HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLL----------LVIYFILFC  549 (552)
Q Consensus       490 hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~----------gIIH~~L~~  549 (552)
                      ++||||||+.+ +|.++++...       +++..++.|+.||+.||.|||++          +|||+|||+
T Consensus        96 ~~~lv~e~~~~g~L~~~l~~~~-------~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp  159 (322)
T 3soc_A           96 DLWLITAFHEKGSLSDFLKANV-------VSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKS  159 (322)
T ss_dssp             EEEEEEECCTTCBHHHHHHHCC-------BCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSG
T ss_pred             eEEEEEecCCCCCHHHHHHhcC-------CCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCCh
Confidence            58999999977 9999997643       89999999999999999999999          999999997

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.79  E-value=2.4e-19  Score=187.49  Aligned_cols=126  Identities=23%  Similarity=0.244  Sum_probs=110.3

Q ss_pred             eecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChh---------hHHHHHHHHHHHHHhcccCCCCCCCeeEe
Q 008813          411 VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD---------FFDQSLDEIKLLKLVNKNDPADEHHILRL  481 (552)
Q Consensus       411 vi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~---------~~~~~lrEIkILk~L~hhd~~d~pnIVrL  481 (552)
                      .+.++|.+.+.||+|+||.||+|.+..+++.||||++.....         ....+.+|+.+|+.++|      |||+++
T Consensus       132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h------pniv~l  205 (419)
T 3i6u_A          132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNH------PCIIKI  205 (419)
T ss_dssp             HHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCC------TTBCCC
T ss_pred             hhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCC------CCEeeE
Confidence            456899999999999999999999999999999999976421         12247899999999998      999999


Q ss_pred             EeEEEeCCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          482 YDYFYHLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       482 ~d~F~~~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ++++. .+.+||||||+.+ +|.+++.....      +++..++.|+.||+.||.|||++||||+|||+
T Consensus       206 ~~~~~-~~~~~lv~e~~~~g~L~~~l~~~~~------~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp  267 (419)
T 3i6u_A          206 KNFFD-AEDYYIVLELMEGGELFDKVVGNKR------LKEATCKLYFYQMLLAVQYLHENGIIHRDLKP  267 (419)
T ss_dssp             CEEEE-SSEEEEEEECCTTCBGGGGTSSSCC------CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCG
T ss_pred             EEEEe-cCceEEEEEcCCCCcHHHHHhccCC------CCHHHHHHHHHHHHHHHHHHHHCCccccCCCh
Confidence            99975 5568999999977 99888775442      89999999999999999999999999999997

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.79  E-value=1.7e-18  Score=177.45  Aligned_cols=127  Identities=18%  Similarity=0.259  Sum_probs=114.4

Q ss_pred             eecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecCh---------hhHHHHHHHHHHHHHh-cccCCCCCCCeeE
Q 008813          411 VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK---------DFFDQSLDEIKLLKLV-NKNDPADEHHILR  480 (552)
Q Consensus       411 vi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk---------~~~~~~lrEIkILk~L-~hhd~~d~pnIVr  480 (552)
                      .+.++|.+.+.||+|+||+||+|.+..+|+.||||+++...         ...+.+.+|+.+++.+ +|      |||++
T Consensus        91 ~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h------p~iv~  164 (365)
T 2y7j_A           91 EFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGH------PHIIT  164 (365)
T ss_dssp             HHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTC------TTBCC
T ss_pred             hhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCC------CCEeE
Confidence            34578999999999999999999999999999999997542         2346778999999999 56      99999


Q ss_pred             eEeEEEeCCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          481 LYDYFYHLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       481 L~d~F~~~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      +++++....++||||||+.+ +|.+++.....      +++..++.|+.||+.||.|||++||+|+|||+
T Consensus       165 ~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~------l~~~~~~~i~~qi~~~L~~LH~~gi~H~Dlkp  228 (365)
T 2y7j_A          165 LIDSYESSSFMFLVFDLMRKGELFDYLTEKVA------LSEKETRSIMRSLLEAVSFLHANNIVHRDLKP  228 (365)
T ss_dssp             EEEEEEBSSEEEEEECCCTTCBHHHHHHHHSS------CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSG
T ss_pred             EEEEEeeCCEEEEEEEeCCCCcHHHHHHhcCC------CCHHHHHHHHHHHHHHHHHHHhCCeecCCCCH
Confidence            99999999999999999987 99999987543      89999999999999999999999999999997

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=99.78  E-value=5.5e-19  Score=176.77  Aligned_cols=138  Identities=18%  Similarity=0.169  Sum_probs=115.3

Q ss_pred             CcceeeCceecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChh-------hHHHHHHHHHHHHHhcccCCCCC
Q 008813          403 DLPIILNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD-------FFDQSLDEIKLLKLVNKNDPADE  475 (552)
Q Consensus       403 ~y~v~~gdvi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~-------~~~~~lrEIkILk~L~hhd~~d~  475 (552)
                      ..+...++.+.++|++.+.||+|+||.||+|.+..+++.||||+++....       ....+.+|+.+++.+++    ++
T Consensus        32 ~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~----~~  107 (320)
T 3a99_A           32 LAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS----GF  107 (320)
T ss_dssp             --------CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCS----SS
T ss_pred             cCcccccCCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhcc----CC
Confidence            34455666788999999999999999999999999999999999976421       12456789999999975    22


Q ss_pred             CCeeEeEeEEEeCCEEEEEEecCC--CCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          476 HHILRLYDYFYHLEHLFIVCELLR--ANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       476 pnIVrL~d~F~~~~hLyIVmEll~--GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      +||+++++++...+.+++|||++.  ++|.+++.....      +++..++.|+.||+.||.|||++||||+|||+-
T Consensus       108 ~~i~~~~~~~~~~~~~~lv~e~~~~~~~L~~~l~~~~~------l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~  178 (320)
T 3a99_A          108 SGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA------LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDE  178 (320)
T ss_dssp             CSBCCEEEEEECSSEEEEEEECCSSEEEHHHHHHHHCS------CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGG
T ss_pred             CCceEEEEEEecCCcEEEEEEcCCCCccHHHHHhccCC------CCHHHHHHHHHHHHHHHHHHHHCCcEeCCCCHH
Confidence            999999999999999999999987  499999987643      899999999999999999999999999999973

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.78  E-value=1.6e-18  Score=169.50  Aligned_cols=125  Identities=21%  Similarity=0.261  Sum_probs=111.6

Q ss_pred             CceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC---hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEe---
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH---  487 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s---k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~---  487 (552)
                      .+|.+.+.||+|+||.||+|.+..++..||+|++...   ....+.+.+|+.+|+.++|      |||+++++++..   
T Consensus        26 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h------~~iv~~~~~~~~~~~   99 (290)
T 1t4h_A           26 RFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQH------PNIVRFYDSWESTVK   99 (290)
T ss_dssp             CEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCC------TTBCCEEEEEEEESS
T ss_pred             eeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCC------CCeeeeeeeeccccC
Confidence            4589999999999999999999999999999999753   3345678899999999998      999999999875   


Q ss_pred             -CCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCC--Ceeeecccc
Q 008813          488 -LEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLL--VIYFILFCF  550 (552)
Q Consensus       488 -~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~g--IIH~~L~~~  550 (552)
                       ..++||||||+.+ +|.++++....      +++..++.|+.||+.||.|||+++  |+|+|||+-
T Consensus       100 ~~~~~~lv~e~~~~~~L~~~l~~~~~------~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~  160 (290)
T 1t4h_A          100 GKKCIVLVTELMTSGTLKTYLKRFKV------MKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCD  160 (290)
T ss_dssp             SCEEEEEEEECCCSCBHHHHHHHHSS------CCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGG
T ss_pred             CCceEEEEEEecCCCCHHHHHHHccC------CCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHH
Confidence             4679999999976 99999987643      899999999999999999999999  999999973

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.78  E-value=7.6e-19  Score=181.27  Aligned_cols=124  Identities=20%  Similarity=0.281  Sum_probs=105.7

Q ss_pred             ceEE--EEEeccCCceEEEEEEECCCCcEEEEEEEecCh-hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEE
Q 008813          415 RYYV--TEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK-DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL  491 (552)
Q Consensus       415 RY~I--le~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk-~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hL  491 (552)
                      .|.+  .+.||+|+||.||+|.+..+++.||||+++... ...+.+.+|+.+|+.|+|      |||+++++++...+.+
T Consensus        88 ~~~~~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h------pnIv~~~~~~~~~~~~  161 (373)
T 2x4f_A           88 FYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDH------ANLIQLYDAFESKNDI  161 (373)
T ss_dssp             TEEEEEEEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCC------TTBCCEEEEEECSSEE
T ss_pred             ceeeecceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCC------CCCCeEEEEEEECCEE
Confidence            4544  678999999999999999999999999998653 345678899999999998      9999999999999999


Q ss_pred             EEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          492 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       492 yIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ||||||+.+ +|.+++.....     .+++..++.|+.||+.||.|||++||||+|||+
T Consensus       162 ~lv~E~~~~~~L~~~l~~~~~-----~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp  215 (373)
T 2x4f_A          162 VLVMEYVDGGELFDRIIDESY-----NLTELDTILFMKQICEGIRHMHQMYILHLDLKP  215 (373)
T ss_dssp             EEEEECCTTCEEHHHHHHTGG-----GCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCG
T ss_pred             EEEEeCCCCCcHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHHCCcccccCCH
Confidence            999999986 99998876543     289999999999999999999999999999997

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=99.78  E-value=9e-19  Score=173.30  Aligned_cols=129  Identities=22%  Similarity=0.270  Sum_probs=110.8

Q ss_pred             ecCceEEEEEeccCCceEEEEEEEC-CCCcEEEEEEEecCh---hhHHHHHHHHHHHHHh---cccCCCCCCCeeEeEeE
Q 008813          412 IAGRYYVTEYLGSAAFSKVFQAQDL-HTGVDVCLKIIKNDK---DFFDQSLDEIKLLKLV---NKNDPADEHHILRLYDY  484 (552)
Q Consensus       412 i~~RY~Ile~LGkG~FG~VykA~Dk-ktg~~VAVKIIk~sk---~~~~~~lrEIkILk~L---~hhd~~d~pnIVrL~d~  484 (552)
                      ..++|++++.||+|+||.||+|++. .+++.||||+++...   .....+.+|+.+++.+   +|      |||++++++
T Consensus         9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h------~~i~~~~~~   82 (326)
T 1blx_A            9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEH------PNVVRLFDV   82 (326)
T ss_dssp             GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCC------TTBCCEEEE
T ss_pred             chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCC------CCeEeeeee
Confidence            3478999999999999999999996 678999999997532   1224567888888887   45      999999999


Q ss_pred             EE-----eCCEEEEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          485 FY-----HLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       485 F~-----~~~hLyIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      +.     ....++||||++.++|.+++.......    +++..++.++.||+.||.|||++||||+|||+-
T Consensus        83 ~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~----~~~~~~~~~~~qi~~~l~~lH~~gi~H~dlkp~  149 (326)
T 1blx_A           83 CTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPG----VPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQ  149 (326)
T ss_dssp             EEEEECSSEEEEEEEEECCSCBHHHHHHHSCTTC----SCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGG
T ss_pred             eeecccCCCceEEEEEecCCCCHHHHHHhcccCC----CCHHHHHHHHHHHHHHHHHHHHCCceeccCCHH
Confidence            97     457899999999999999998765433    899999999999999999999999999999973

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.78  E-value=1e-18  Score=174.86  Aligned_cols=134  Identities=16%  Similarity=0.186  Sum_probs=111.4

Q ss_pred             eecCceEEEEEeccCCceEEEEEEEC-----CCCcEEEEEEEecC--hhhHHHHHHHHHHHHHh-cccCCCCCCCeeEeE
Q 008813          411 VIAGRYYVTEYLGSAAFSKVFQAQDL-----HTGVDVCLKIIKND--KDFFDQSLDEIKLLKLV-NKNDPADEHHILRLY  482 (552)
Q Consensus       411 vi~~RY~Ile~LGkG~FG~VykA~Dk-----ktg~~VAVKIIk~s--k~~~~~~lrEIkILk~L-~hhd~~d~pnIVrL~  482 (552)
                      +..++|.+.+.||+|+||.||+|.+.     .+++.||||+++..  ....+.+.+|+.+|+.+ +|      |||++++
T Consensus        42 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h------p~iv~~~  115 (344)
T 1rjb_A           42 FPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSH------ENIVNLL  115 (344)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCC------TTBCCEE
T ss_pred             cCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCC------CCeeeEE
Confidence            44578999999999999999999973     45678999999754  23456788999999999 66      9999999


Q ss_pred             eEEEeCCEEEEEEecCCC-CHHHHHHhhccCC-----------------CCcCCCHHHHHHHHHHHHHHHHHHHhCCCee
Q 008813          483 DYFYHLEHLFIVCELLRA-NLYEFQKFNQESG-----------------GEAYFTLGRLQVCSTFLLTLLMLIFLLLVIY  544 (552)
Q Consensus       483 d~F~~~~hLyIVmEll~G-sL~d~Lk~~~~~g-----------------~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH  544 (552)
                      +++...+.+||||||+.+ +|.+++.......                 ....+++..++.|+.||+.||.|||++||||
T Consensus       116 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH  195 (344)
T 1rjb_A          116 GACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVH  195 (344)
T ss_dssp             EEECSSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEE
T ss_pred             EEEeeCCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCCccc
Confidence            999999999999999976 9999998654210                 0023799999999999999999999999999


Q ss_pred             eecccc
Q 008813          545 FILFCF  550 (552)
Q Consensus       545 ~~L~~~  550 (552)
                      +|||+-
T Consensus       196 ~Dikp~  201 (344)
T 1rjb_A          196 RDLAAR  201 (344)
T ss_dssp             TTCSGG
T ss_pred             CCCChh
Confidence            999973

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.78  E-value=8e-19  Score=175.11  Aligned_cols=127  Identities=22%  Similarity=0.202  Sum_probs=110.5

Q ss_pred             ceecCce-EEEEEeccCCceEEEEEEE----CCCCcEEEEEEEecC--hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeE
Q 008813          410 TVIAGRY-YVTEYLGSAAFSKVFQAQD----LHTGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLY  482 (552)
Q Consensus       410 dvi~~RY-~Ile~LGkG~FG~VykA~D----kktg~~VAVKIIk~s--k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~  482 (552)
                      .++.+|| ++++.||+|+||.||++..    ..+++.||||+++..  ......+.+|+++|+.++|      |||++++
T Consensus        26 ~~~~~r~~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h------~~iv~~~   99 (318)
T 3lxp_A           26 TVFHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYH------EHIIKYK   99 (318)
T ss_dssp             CBCCGGGEEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCC------TTBCCEE
T ss_pred             ceecHHHHhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCC------cchhhEE
Confidence            3566777 9999999999999988754    457899999999864  2345678999999999998      9999999


Q ss_pred             eEEEeC--CEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          483 DYFYHL--EHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       483 d~F~~~--~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      +++...  .+++|||||+.+ +|.++++...       +++..++.|+.||+.||.|||++||||+|||+
T Consensus       100 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-------~~~~~~~~i~~~l~~~l~~LH~~~ivH~Dikp  162 (318)
T 3lxp_A          100 GCCEDAGAASLQLVMEYVPLGSLRDYLPRHS-------IGLAQLLLFAQQICEGMAYLHAQHYIHRDLAA  162 (318)
T ss_dssp             EEEEETTTTEEEEEECCCTTCBHHHHGGGSC-------CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSG
T ss_pred             EEEecCCCceEEEEEecccCCcHHHHHhhCC-------CCHHHHHHHHHHHHHHHHHHHhCCccCCCCch
Confidence            999984  789999999987 9999987643       89999999999999999999999999999997

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.78  E-value=2.3e-18  Score=166.65  Aligned_cols=130  Identities=18%  Similarity=0.156  Sum_probs=113.2

Q ss_pred             cCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC---hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEe--
Q 008813          413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH--  487 (552)
Q Consensus       413 ~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s---k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~--  487 (552)
                      .++|++++.||+|+||.||+|.+..+++.||+|++...   ....+.+.+|+.+++.++|      |||+++++++..  
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h------~~i~~~~~~~~~~~   78 (279)
T 2w5a_A            5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKH------PNIVRYYDRIIDRT   78 (279)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCC------TTBCCEEEEEEEGG
T ss_pred             hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCC------CCCCeEEEEEecCC
Confidence            46899999999999999999999999999999999753   3345678899999999998      999999998864  


Q ss_pred             CCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCC-----Ceeeecccc
Q 008813          488 LEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLL-----VIYFILFCF  550 (552)
Q Consensus       488 ~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~g-----IIH~~L~~~  550 (552)
                      ...+||||||+.+ +|.+++.......  .++++..++.|+.||+.||.|||+++     |||+||++-
T Consensus        79 ~~~~~lv~e~~~~~~L~~~l~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~  145 (279)
T 2w5a_A           79 NTTLYIVMEYCEGGDLASVITKGTKER--QYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPA  145 (279)
T ss_dssp             GTEEEEEEECCTTEEHHHHHHHHHHTT--CCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGG
T ss_pred             CceEEEEEeCCCCCCHHHHHHhhcccC--CCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchh
Confidence            5789999999987 9999998654322  23899999999999999999999999     999999873

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.78  E-value=1.2e-18  Score=190.39  Aligned_cols=131  Identities=19%  Similarity=0.171  Sum_probs=115.8

Q ss_pred             eecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecCh----hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEE
Q 008813          411 VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFY  486 (552)
Q Consensus       411 vi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk----~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~  486 (552)
                      +..++|.+++.||+|+||+||+|+++.+++.||||++++..    .....+.+|+++|+.++|      |||++++++|.
T Consensus       182 ~~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~h------p~Iv~l~~~~~  255 (543)
T 3c4z_A          182 MGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHS------RFIVSLAYAFE  255 (543)
T ss_dssp             CCGGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCC------TTBCCEEEEEE
T ss_pred             CChhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCC------CCEeeEEEEEe
Confidence            44578999999999999999999999999999999997642    234578899999999988      99999999999


Q ss_pred             eCCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          487 HLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       487 ~~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ...++||||||+.| +|.+++.......  ..+++..++.|+.||+.||.|||++||||+|||+
T Consensus       256 ~~~~l~lVmE~~~gg~L~~~l~~~~~~~--~~l~e~~~~~~~~qi~~aL~~LH~~gIvHrDLKP  317 (543)
T 3c4z_A          256 TKTDLCLVMTIMNGGDIRYHIYNVDEDN--PGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKP  317 (543)
T ss_dssp             CSSEEEEEECCCTTCBHHHHHHTSSTTS--CSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCG
T ss_pred             eCCEEEEEEEeccCCCHHHHHHHhhccc--ccccHHHHHHHHHHHHHHHHHHHHcCCcccCCCh
Confidence            99999999999986 9999998654211  2399999999999999999999999999999997

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.78  E-value=8.3e-19  Score=179.54  Aligned_cols=124  Identities=23%  Similarity=0.302  Sum_probs=111.7

Q ss_pred             ecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC---hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeC
Q 008813          412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL  488 (552)
Q Consensus       412 i~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s---k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~  488 (552)
                      +.++|.+.+.||+|+||.||+|.+..+++.||||++...   ......+.+|+.+++.++|      |||+++++++...
T Consensus        40 l~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h------~niv~~~~~~~~~  113 (371)
T 4exu_A           40 LPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQH------ENVIGLLDVFTPA  113 (371)
T ss_dssp             EETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCC------TTBCCCSEEECSC
T ss_pred             ccccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCC------CCchhhhhheecc
Confidence            568999999999999999999999999999999999763   3345778899999999998      9999999999877


Q ss_pred             CEE------EEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          489 EHL------FIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       489 ~hL------yIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      +..      ||||||+.++|.+++..        .+++..++.|+.||+.||.|||++||||+|||+
T Consensus       114 ~~~~~~~~~~lv~e~~~~~l~~~~~~--------~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp  172 (371)
T 4exu_A          114 SSLRNFYDFYLVMPFMQTDLQKIMGM--------EFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKP  172 (371)
T ss_dssp             SSSTTCCCCEEEEECCCEEHHHHTTS--------CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCG
T ss_pred             CCcccceeEEEEEccccccHHHHhhc--------CCCHHHHHHHHHHHHHHHHHHHHCCCcCCCcCH
Confidence            654      99999999999887632        189999999999999999999999999999996

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.78  E-value=1.2e-18  Score=174.04  Aligned_cols=129  Identities=17%  Similarity=0.164  Sum_probs=111.8

Q ss_pred             eecCceEEEEEeccCCceEEEEEE----ECCCCcEEEEEEEecC-hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEE
Q 008813          411 VIAGRYYVTEYLGSAAFSKVFQAQ----DLHTGVDVCLKIIKND-KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYF  485 (552)
Q Consensus       411 vi~~RY~Ile~LGkG~FG~VykA~----Dkktg~~VAVKIIk~s-k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F  485 (552)
                      ...++|++++.||+|+||.||+|+    +..+++.||||+++.. ....+.+.+|+.+|+.++|      +||+++++++
T Consensus        38 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h------~~iv~~~~~~  111 (326)
T 2w1i_A           38 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH------DNIVKYKGVC  111 (326)
T ss_dssp             CCGGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCC------TTBCCEEEEE
T ss_pred             cCHHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCC------CCeeeEEEEE
Confidence            345679999999999999999998    4668999999999764 3345678899999999998      9999999998


Q ss_pred             EeCC--EEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          486 YHLE--HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       486 ~~~~--hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      ...+  .++||||++.+ +|.++++....     .+++..++.++.||+.||.|||++||+|+|||+-
T Consensus       112 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~  174 (326)
T 2w1i_A          112 YSAGRRNLKLIMEYLPYGSLRDYLQKHKE-----RIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATR  174 (326)
T ss_dssp             CC----CCEEEECCCTTCBHHHHHHHSTT-----SSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGG
T ss_pred             EecCCCceEEEEECCCCCCHHHHHHhccc-----CCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcc
Confidence            7653  78999999976 99999987643     2899999999999999999999999999999973

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.78  E-value=1.4e-18  Score=174.23  Aligned_cols=134  Identities=21%  Similarity=0.312  Sum_probs=112.2

Q ss_pred             eecCceEEEEEeccCCceEEEEEEEC-------CCCcEEEEEEEecC--hhhHHHHHHHHHHHHHh-cccCCCCCCCeeE
Q 008813          411 VIAGRYYVTEYLGSAAFSKVFQAQDL-------HTGVDVCLKIIKND--KDFFDQSLDEIKLLKLV-NKNDPADEHHILR  480 (552)
Q Consensus       411 vi~~RY~Ile~LGkG~FG~VykA~Dk-------ktg~~VAVKIIk~s--k~~~~~~lrEIkILk~L-~hhd~~d~pnIVr  480 (552)
                      +..++|++.+.||+|+||.||+|.+.       .+++.||||+++..  ......+.+|+.+++.+ +|      |||++
T Consensus        32 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h------p~iv~  105 (334)
T 2pvf_A           32 FPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH------KNIIN  105 (334)
T ss_dssp             CCGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCC------TTBCC
T ss_pred             CCHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcC------CCEee
Confidence            44578999999999999999999986       45678999999764  33456788999999999 56      99999


Q ss_pred             eEeEEEeCCEEEEEEecCCC-CHHHHHHhhccCC----------CCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          481 LYDYFYHLEHLFIVCELLRA-NLYEFQKFNQESG----------GEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       481 L~d~F~~~~hLyIVmEll~G-sL~d~Lk~~~~~g----------~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      +++++...+.+||||||+.+ +|.+++......+          ....+++..++.++.||+.||.|||++||||+|||+
T Consensus       106 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp  185 (334)
T 2pvf_A          106 LLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAA  185 (334)
T ss_dssp             EEEEECSSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSG
T ss_pred             EEEEEccCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCcc
Confidence            99999999999999999987 9999998754211          012389999999999999999999999999999997


Q ss_pred             c
Q 008813          550 F  550 (552)
Q Consensus       550 ~  550 (552)
                      -
T Consensus       186 ~  186 (334)
T 2pvf_A          186 R  186 (334)
T ss_dssp             G
T ss_pred             c
Confidence            3

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.78  E-value=1.9e-18  Score=172.22  Aligned_cols=134  Identities=17%  Similarity=0.181  Sum_probs=113.7

Q ss_pred             eecCceEEEEEeccCCceEEEEEEECCCCc-----EEEEEEEecC--hhhHHHHHHHHHHHHHh-cccCCCCCCCeeEeE
Q 008813          411 VIAGRYYVTEYLGSAAFSKVFQAQDLHTGV-----DVCLKIIKND--KDFFDQSLDEIKLLKLV-NKNDPADEHHILRLY  482 (552)
Q Consensus       411 vi~~RY~Ile~LGkG~FG~VykA~Dkktg~-----~VAVKIIk~s--k~~~~~~lrEIkILk~L-~hhd~~d~pnIVrL~  482 (552)
                      ...++|.+.+.||+|+||.||+|.+..+++     .||||+++..  ....+.+.+|+.+|+.+ +|      |||++++
T Consensus        43 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h------~~iv~~~  116 (333)
T 2i1m_A           43 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQH------ENIVNLL  116 (333)
T ss_dssp             CCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCC------TTBCCEE
T ss_pred             CCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCC------CCeeeEE
Confidence            345789999999999999999999876654     7999999764  23456788999999999 66      9999999


Q ss_pred             eEEEeCCEEEEEEecCCC-CHHHHHHhhccCC--------CCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          483 DYFYHLEHLFIVCELLRA-NLYEFQKFNQESG--------GEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       483 d~F~~~~hLyIVmEll~G-sL~d~Lk~~~~~g--------~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      +++...+.+||||||+.+ +|.+++.......        ...++++..++.++.||+.||.|||++||||+|||+-
T Consensus       117 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~  193 (333)
T 2i1m_A          117 GACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAAR  193 (333)
T ss_dssp             EEECSSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGG
T ss_pred             EEEecCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCcccCCcccc
Confidence            999999999999999987 9999998653200        0013799999999999999999999999999999973

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.78  E-value=7.4e-19  Score=195.86  Aligned_cols=127  Identities=20%  Similarity=0.226  Sum_probs=114.4

Q ss_pred             ecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC----hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEe
Q 008813          412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND----KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH  487 (552)
Q Consensus       412 i~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s----k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~  487 (552)
                      ..++|++++.||+|+||+||+|+++.+++.||||++++.    ........+|+.+|..+.+|     ++|++++++|..
T Consensus       339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~-----~~i~~l~~~~~~  413 (674)
T 3pfq_A          339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKP-----PFLTQLHSCFQT  413 (674)
T ss_dssp             -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCC-----TTBCCEEEECBC
T ss_pred             cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCC-----CeEEEEEEEEEe
Confidence            447899999999999999999999999999999999863    22346788999999988665     999999999999


Q ss_pred             CCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          488 LEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       488 ~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      .+++||||||+.+ +|.++++....      +++..++.|+.||+.||.|||++||||+|||+
T Consensus       414 ~~~~~lV~E~~~gg~L~~~l~~~~~------~~~~~~~~~~~qi~~aL~~LH~~gIiHrDLKp  470 (674)
T 3pfq_A          414 MDRLYFVMEYVNGGDLMYHIQQVGR------FKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKL  470 (674)
T ss_dssp             SSEEEEEEECCCSCBHHHHHHHHSS------CCHHHHHHHHHHHHHHHHHHHHTSEECCCCCS
T ss_pred             CCEEEEEEeCcCCCcHHHHHHhcCC------CCHHHHHHHHHHHHHHHHHHHhCCeEeccCCh
Confidence            9999999999987 99999987653      99999999999999999999999999999997

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=99.78  E-value=3.5e-19  Score=183.42  Aligned_cols=126  Identities=25%  Similarity=0.292  Sum_probs=104.4

Q ss_pred             ecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC---hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeC
Q 008813          412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL  488 (552)
Q Consensus       412 i~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s---k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~  488 (552)
                      +.+||++++.||+|+||.||+|.+..+++.||||++...   ....+.+.+|+++|+.++|      |||+++++++...
T Consensus        27 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h------pnIv~~~~~~~~~  100 (367)
T 2fst_X           27 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH------ENVIGLLDVFTPA  100 (367)
T ss_dssp             EETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCC------TTBCCCSEEECSC
T ss_pred             CCCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCC------CCCCcEEEEEecC
Confidence            458999999999999999999999999999999999753   2345678899999999998      9999999999754


Q ss_pred             ------CEEEEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          489 ------EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       489 ------~hLyIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                            ..+|||||+++++|.++++...       +++..++.++.||+.||.|||++||||+|||+-
T Consensus       101 ~~~~~~~~~~lv~e~~~~~L~~~~~~~~-------l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~  161 (367)
T 2fst_X          101 RSLEEFNDVYLVTHLMGADLNNIVKCQK-------LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPS  161 (367)
T ss_dssp             SSGGGCCCCEEEEECCCEECC-----CC-------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGG
T ss_pred             CccccCCeEEEEecccCCCHHHHHhcCC-------CCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHh
Confidence                  5689999999889999887632       899999999999999999999999999999973

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.78  E-value=1.1e-18  Score=169.93  Aligned_cols=127  Identities=13%  Similarity=0.094  Sum_probs=111.0

Q ss_pred             ceecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChh--------hHHHHHHHHHHHHHhcccCCCCCCCeeEe
Q 008813          410 TVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD--------FFDQSLDEIKLLKLVNKNDPADEHHILRL  481 (552)
Q Consensus       410 dvi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~--------~~~~~lrEIkILk~L~hhd~~d~pnIVrL  481 (552)
                      .+..++|++.+.||+|+||.||+|++..+++.||||++.....        ..+.+.+|+.+++.++|      +||+++
T Consensus        15 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h------~~i~~~   88 (287)
T 4f0f_A           15 TLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNH------PNIVKL   88 (287)
T ss_dssp             BCCSTTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCC------TTBCCE
T ss_pred             hhhhccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCC------CCchhh
Confidence            3456899999999999999999999999999999999865321        11678899999999998      999999


Q ss_pred             EeEEEeCCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCC--Ceeeeccc
Q 008813          482 YDYFYHLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLL--VIYFILFC  549 (552)
Q Consensus       482 ~d~F~~~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~g--IIH~~L~~  549 (552)
                      ++++....  +|||||+.+ +|.+++.....     ++++..++.++.||+.||.|||++|  |||+|||+
T Consensus        89 ~~~~~~~~--~lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dikp  152 (287)
T 4f0f_A           89 YGLMHNPP--RMVMEFVPCGDLYHRLLDKAH-----PIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRS  152 (287)
T ss_dssp             EEEETTTT--EEEEECCTTCBHHHHHHCTTS-----CCCHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCSG
T ss_pred             heeecCCC--eEEEEecCCCCHHHHHhcccC-----CccHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCc
Confidence            99987665  699999985 99998876543     2899999999999999999999999  99999997

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=99.78  E-value=1.3e-18  Score=169.83  Aligned_cols=124  Identities=14%  Similarity=0.177  Sum_probs=106.6

Q ss_pred             CceecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChhhHHHHHHHHHHHHH--hcccCCCCCCCeeEeEeEEE
Q 008813          409 NTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKL--VNKNDPADEHHILRLYDYFY  486 (552)
Q Consensus       409 gdvi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~~~~~~lrEIkILk~--L~hhd~~d~pnIVrL~d~F~  486 (552)
                      +..+.++|++++.||+|+||.||+|.+  +++.||||++....  .....+|.+++..  ++|      |||+++++++.
T Consensus         3 ~~~~~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~--~~~~~~e~~~~~~~~l~h------~niv~~~~~~~   72 (301)
T 3q4u_A            3 QRTVARDITLLECVGKGRYGEVWRGSW--QGENVAVKIFSSRD--EKSWFRETELYNTVMLRH------ENILGFIASDM   72 (301)
T ss_dssp             -CCCGGGCEEEEEEEECSSEEEEEEEE--TTEEEEEEEECGGG--HHHHHHHHHHHHHTCCCC------TTBCCEEEEEE
T ss_pred             cccccCcEEEEEeeccCCCcEEEEEEE--CCEEEEEEEecccc--chhhHHHHHHHHHhhccC------cCeeeEEEeec
Confidence            356778999999999999999999987  68899999997543  3556678888877  666      99999999976


Q ss_pred             eC----CEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHH--------hCCCeeeeccc
Q 008813          487 HL----EHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIF--------LLLVIYFILFC  549 (552)
Q Consensus       487 ~~----~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLH--------s~gIIH~~L~~  549 (552)
                      ..    ..+||||||+.+ +|.++++...       +++..++.|+.||+.||.|||        +++|||+|||+
T Consensus        73 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~-------~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp  141 (301)
T 3q4u_A           73 TSRHSSTQLWLITHYHEMGSLYDYLQLTT-------LDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKS  141 (301)
T ss_dssp             EEETTEEEEEEEECCCTTCBHHHHHTTCC-------BCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCG
T ss_pred             cccCCCceeEEehhhccCCCHHHHHhhcc-------cCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCCh
Confidence            43    569999999987 9999996432       899999999999999999999        99999999997

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.78  E-value=6.8e-19  Score=177.72  Aligned_cols=127  Identities=24%  Similarity=0.340  Sum_probs=110.9

Q ss_pred             eecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC------------hhhHHHHHHHHHHHHHhcccCCCCCCCe
Q 008813          411 VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND------------KDFFDQSLDEIKLLKLVNKNDPADEHHI  478 (552)
Q Consensus       411 vi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s------------k~~~~~~lrEIkILk~L~hhd~~d~pnI  478 (552)
                      .+.++|++++.||+|+||.||+|.+.. ++.||||++...            ....+.+.+|+++|+.++|      |||
T Consensus        19 ~~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h------~~i   91 (362)
T 3pg1_A           19 AMQSPYTVQRFISSGSYGAVCAGVDSE-GIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHH------PNI   91 (362)
T ss_dssp             HTTCSCEEEEEEEEETTEEEEEEECTT-SCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCC------TTB
T ss_pred             HhccceEEeEEeccCCCEEEEEEECCC-CCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCC------cCc
Confidence            456899999999999999999999865 899999998642            1123678999999999998      999


Q ss_pred             eEeEeEEEeC-----CEEEEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          479 LRLYDYFYHL-----EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       479 VrL~d~F~~~-----~hLyIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      +++++++...     .++||||||+.++|.+++.....     ++++..++.|+.||+.||.|||++||||+|||+
T Consensus        92 v~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp  162 (362)
T 3pg1_A           92 LGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRI-----VISPQHIQYFMYHILLGLHVLHEAGVVHRDLHP  162 (362)
T ss_dssp             CCCSEEEEECCTTTCCEEEEEEECCSEEHHHHHHCTTS-----CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCG
T ss_pred             cceeeeEEeccCCCcceEEEEEccCCCCHHHHHHhccc-----CCCHHHHHHHHHHHHHHHHHHHHCcCEecCCCh
Confidence            9999999643     47999999999999999886542     289999999999999999999999999999996

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.78  E-value=3.7e-19  Score=183.31  Aligned_cols=128  Identities=16%  Similarity=0.164  Sum_probs=112.3

Q ss_pred             eecCceEEEEEeccCCceEEEEEEEC---CCCcEEEEEEEecC--hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEE
Q 008813          411 VIAGRYYVTEYLGSAAFSKVFQAQDL---HTGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYF  485 (552)
Q Consensus       411 vi~~RY~Ile~LGkG~FG~VykA~Dk---ktg~~VAVKIIk~s--k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F  485 (552)
                      +...+|.+.+.||+|+||.||+|++.   .++..||||+++..  ....+.+.+|+.+|+.++|      |||+++++++
T Consensus        42 ~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h------~niv~~~~~~  115 (373)
T 2qol_A           42 LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH------PNIIRLEGVV  115 (373)
T ss_dssp             CCGGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCC------TTBCCEEEEE
T ss_pred             cCHhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCC------CCCCeEEEEE
Confidence            34468999999999999999999887   46778999999754  3345678999999999998      9999999999


Q ss_pred             EeCCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          486 YHLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       486 ~~~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ...+++||||||+.+ +|.++++....     .+++..++.|+.||+.||.|||++||||+|||+
T Consensus       116 ~~~~~~~lv~e~~~~~sL~~~l~~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp  175 (373)
T 2qol_A          116 TKSKPVMIVTEYMENGSLDSFLRKHDA-----QFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAA  175 (373)
T ss_dssp             CSSSSCEEEEECCTTCBHHHHHHTTTT-----CSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCG
T ss_pred             eeCCceEEEEeCCCCCcHHHHHHhCCC-----CCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCc
Confidence            999999999999976 99999986542     289999999999999999999999999999997

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=99.78  E-value=7.6e-19  Score=177.69  Aligned_cols=124  Identities=12%  Similarity=0.081  Sum_probs=106.3

Q ss_pred             cCceEEEEEeccCCceEEEEEEECCC--------CcEEEEEEEecChhhHHHHHHHHHHHHHhcccCCCCCCCeeE----
Q 008813          413 AGRYYVTEYLGSAAFSKVFQAQDLHT--------GVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILR----  480 (552)
Q Consensus       413 ~~RY~Ile~LGkG~FG~VykA~Dkkt--------g~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd~~d~pnIVr----  480 (552)
                      .++|++.+.||+|+||.||+|.+..+        ++.||||++...    +.+.+|+++++.++|      |||++    
T Consensus        41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~----~~~~~E~~~l~~l~h------~niv~~~~~  110 (352)
T 2jii_A           41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD----GRLFNEQNFFQRAAK------PLQVNKWKK  110 (352)
T ss_dssp             SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT----STHHHHHHHHHHHCC------HHHHHHHHH
T ss_pred             CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc----chHHHHHHHHHHhcc------cchhhhhhh
Confidence            47999999999999999999999874        789999999865    357789999999988      77776    


Q ss_pred             -----------eEeEEEe-CCEEEEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecc
Q 008813          481 -----------LYDYFYH-LEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILF  548 (552)
Q Consensus       481 -----------L~d~F~~-~~hLyIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~  548 (552)
                                 +++++.. .+.+||||||++++|.++++.....    ++++..++.|+.||+.||.|||++||||+|||
T Consensus       111 ~~~~~~~~i~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~----~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dik  186 (352)
T 2jii_A          111 LYSTPLLAIPTCMGFGVHQDKYRFLVLPSLGRSLQSALDVSPKH----VLSERSVLQVACRLLDALEFLHENEYVHGNVT  186 (352)
T ss_dssp             HTTCTTCSCCCCCEEEEETTTEEEEEEECCCEEHHHHHHHSGGG----CCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCC
T ss_pred             hccCCccCccchhhccccCCcEEEEEecCCCcCHHHHHHhCCcC----CCCHHHHHHHHHHHHHHHHHHHhCCccCCCCC
Confidence                       6777776 6899999999966999999976322    29999999999999999999999999999999


Q ss_pred             cc
Q 008813          549 CF  550 (552)
Q Consensus       549 ~~  550 (552)
                      +-
T Consensus       187 p~  188 (352)
T 2jii_A          187 AE  188 (352)
T ss_dssp             GG
T ss_pred             HH
Confidence            73

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.78  E-value=3.4e-19  Score=173.78  Aligned_cols=135  Identities=19%  Similarity=0.183  Sum_probs=98.7

Q ss_pred             ceecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC--hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEe
Q 008813          410 TVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH  487 (552)
Q Consensus       410 dvi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s--k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~  487 (552)
                      .+..++|++.+.||+|+||.||+|.+..+++.||||++...  ....+.+.+|+.+++.++|      |||+++++++..
T Consensus        11 ~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h------~~i~~~~~~~~~   84 (303)
T 2vwi_A           11 SINRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHH------PNIVSYYTSFVV   84 (303)
T ss_dssp             --CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCC------TTBCCEEEEEES
T ss_pred             ccchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCC------CCEeeEEEEEee
Confidence            45568999999999999999999999999999999998754  2234567899999999987      999999999999


Q ss_pred             CCEEEEEEecCCC-CHHHHHHhhccCC--CCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          488 LEHLFIVCELLRA-NLYEFQKFNQESG--GEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       488 ~~hLyIVmEll~G-sL~d~Lk~~~~~g--~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      .+.+++||||+.+ +|.++++.....+  ....+++..++.++.||+.||.|||++||+|+||++-
T Consensus        85 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~  150 (303)
T 2vwi_A           85 KDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAG  150 (303)
T ss_dssp             SSCEEEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGG
T ss_pred             cCCcEEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCCChh
Confidence            9999999999976 9999988532110  0123899999999999999999999999999999973

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.77  E-value=9.9e-19  Score=184.40  Aligned_cols=128  Identities=20%  Similarity=0.214  Sum_probs=112.8

Q ss_pred             ceecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCC
Q 008813          410 TVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE  489 (552)
Q Consensus       410 dvi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~  489 (552)
                      .+...+|.+.+.||+|+||.||+|.+. .+..||||+++......+.+.+|+.+|+.|+|      ||||++++++. .+
T Consensus       184 ~i~~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h------~~iv~l~~~~~-~~  255 (454)
T 1qcf_A          184 EIPRESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGSMSVEAFLAEANVMKTLQH------DKLVKLHAVVT-KE  255 (454)
T ss_dssp             BCCGGGEEEEEEEECCSSEEEEEEEET-TTEEEEEEEECTTSBCHHHHHHHHHHHTTCCC------TTBCCEEEEEC-SS
T ss_pred             eechHHeEEEEEcccCCceEEEEEEEC-CccEEEEEEecCCCccHHHHHHHHHHHhhCCC------CCEeeEEEEEe-CC
Confidence            345578999999999999999999986 46789999998765556789999999999998      99999999986 67


Q ss_pred             EEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          490 HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       490 hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      .+||||||+.+ +|.++++......    +++..+..|+.||+.||.|||+++|||+|||+
T Consensus       256 ~~~lv~e~~~~g~L~~~l~~~~~~~----~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp  312 (454)
T 1qcf_A          256 PIYIITEFMAKGSLLDFLKSDEGSK----QPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRA  312 (454)
T ss_dssp             SCEEEECCCTTCBHHHHHHSHHHHT----CCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSG
T ss_pred             ccEEEEeecCCCcHHHHHHhccCCC----CCHHHHHHHHHHHHHHHHHHHhCCccCCCCCH
Confidence            79999999976 9999998654322    89999999999999999999999999999997

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.77  E-value=2.2e-18  Score=181.78  Aligned_cols=126  Identities=17%  Similarity=0.160  Sum_probs=111.7

Q ss_pred             eecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCC-
Q 008813          411 VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE-  489 (552)
Q Consensus       411 vi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~-  489 (552)
                      +..++|++++.||+|+||.||+|.+.  ++.||||+++... ..+.+.+|+.+|+.++|      ||||++++++.... 
T Consensus       190 i~~~~~~~~~~lG~G~fg~V~~~~~~--~~~vavK~~~~~~-~~~~~~~E~~~l~~l~h------~niv~~~~~~~~~~~  260 (450)
T 1k9a_A          190 LNMKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDA-TAQAFLAEASVMTQLRH------SNLVQLLGVIVEEKG  260 (450)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEET--TEEEEEEEESSCT-TSHHHHHHHHHHHTCCC------TTBCCEEEEEECTTS
T ss_pred             cChHHeEEEeeecCcCCeeEEEEEec--CCeEEEEEeCCch-HHHHHHHHHHHHHhccC------CCEEEEEEEEEcCCC
Confidence            34468999999999999999999885  6799999998654 45678999999999998      99999999987665 


Q ss_pred             EEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          490 HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       490 hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      .+||||||+.+ +|.++++......    +++..++.|+.||+.||.|||+++|||+|||+
T Consensus       261 ~~~iv~e~~~~g~L~~~l~~~~~~~----~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp  317 (450)
T 1k9a_A          261 GLYIVTEYMAKGSLVDYLRSRGRSV----LGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAA  317 (450)
T ss_dssp             CEEEEEECCTTCBHHHHHHHHCTTT----CCHHHHHHHHHHHHHHHHHHHHTTEECSCCCG
T ss_pred             ceEEEEEecCCCcHHHHHHhcCCCC----CCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCH
Confidence            79999999987 9999999765432    79999999999999999999999999999997

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.77  E-value=1.4e-18  Score=167.50  Aligned_cols=123  Identities=19%  Similarity=0.184  Sum_probs=105.1

Q ss_pred             ecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecCh-----hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEE
Q 008813          412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK-----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFY  486 (552)
Q Consensus       412 i~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk-----~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~  486 (552)
                      ..++|++.+.||+|+||.||+|.+.  ++.||||+++...     ...+.+.+|+++++.++|      |||+++++++.
T Consensus         5 ~~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h------~~i~~~~~~~~   76 (271)
T 3dtc_A            5 DFAELTLEEIIGIGGFGKVYRAFWI--GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKH------PNIIALRGVCL   76 (271)
T ss_dssp             CTTSEEEEEEEEEETTEEEEEEEET--TEEEEEEEC----------CHHHHHHHHHHHHHCCC------TTBCCEEEEEC
T ss_pred             chhheeeeeeeccCCCeEEEEEEEc--CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCC------CCEeeEEEEEe
Confidence            3478999999999999999999984  7899999987542     234678899999999998      99999999999


Q ss_pred             eCCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCC---Ceeeeccc
Q 008813          487 HLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLL---VIYFILFC  549 (552)
Q Consensus       487 ~~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~g---IIH~~L~~  549 (552)
                      ..+++||||||+.+ +|.++++..       ++++..++.++.||+.||.|||++|   |+|+|||+
T Consensus        77 ~~~~~~lv~e~~~~~~L~~~~~~~-------~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp  136 (271)
T 3dtc_A           77 KEPNLCLVMEFARGGPLNRVLSGK-------RIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKS  136 (271)
T ss_dssp             CC--CEEEEECCTTEEHHHHHTSS-------CCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSG
T ss_pred             cCCceEEEEEcCCCCCHHHHhhcC-------CCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCch
Confidence            99999999999977 899988532       2899999999999999999999999   99999997

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.77  E-value=1.5e-18  Score=173.07  Aligned_cols=131  Identities=17%  Similarity=0.178  Sum_probs=110.8

Q ss_pred             CceEEEEEeccCCceEEEEEEECCCCcEE--EEEEEecC--hhhHHHHHHHHHHHHHh-cccCCCCCCCeeEeEeEEEeC
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDV--CLKIIKND--KDFFDQSLDEIKLLKLV-NKNDPADEHHILRLYDYFYHL  488 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkktg~~V--AVKIIk~s--k~~~~~~lrEIkILk~L-~hhd~~d~pnIVrL~d~F~~~  488 (552)
                      ++|++.+.||+|+||.||+|++..++..+  |||+++..  ......+.+|+++|+.+ +|      |||+++++++...
T Consensus        25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h------p~iv~~~~~~~~~   98 (327)
T 1fvr_A           25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHH------PNIINLLGACEHR   98 (327)
T ss_dssp             GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCC------TTBCCEEEEEEET
T ss_pred             HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCC------CchhhhceeeeeC
Confidence            68999999999999999999999888765  99998753  23345688999999999 55      9999999999999


Q ss_pred             CEEEEEEecCCC-CHHHHHHhhcc----------CCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          489 EHLFIVCELLRA-NLYEFQKFNQE----------SGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       489 ~hLyIVmEll~G-sL~d~Lk~~~~----------~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      +++||||||+.+ +|.+++.....          .....++++..++.|+.||+.||.|||++||||+|||+-
T Consensus        99 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~  171 (327)
T 1fvr_A           99 GYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAAR  171 (327)
T ss_dssp             TEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGG
T ss_pred             CceEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCccCCCCccc
Confidence            999999999976 99999986531          000123899999999999999999999999999999973

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.77  E-value=2.3e-18  Score=168.79  Aligned_cols=125  Identities=17%  Similarity=0.143  Sum_probs=109.0

Q ss_pred             cCceEEEE-EeccCCceEEEEEEE--CCCCcEEEEEEEecC---hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEE
Q 008813          413 AGRYYVTE-YLGSAAFSKVFQAQD--LHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFY  486 (552)
Q Consensus       413 ~~RY~Ile-~LGkG~FG~VykA~D--kktg~~VAVKIIk~s---k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~  486 (552)
                      ..+|.+.+ .||+|+||.||+|.+  ..+++.||||+++..   ....+.+.+|+.+++.++|      |||+++++++ 
T Consensus        15 ~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h------~~i~~~~~~~-   87 (291)
T 1xbb_A           15 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDN------PYIVRMIGIC-   87 (291)
T ss_dssp             GGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCC------TTBCCEEEEE-
T ss_pred             chhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCC------CCEEEEEEEE-
Confidence            46899998 999999999999954  567889999999764   2335678899999999998      9999999998 


Q ss_pred             eCCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          487 HLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       487 ~~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      ..+.+++|||++.+ +|.++++....      +++..++.++.||+.||.|||++||+|+|||+-
T Consensus        88 ~~~~~~lv~e~~~~~~L~~~l~~~~~------~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~  146 (291)
T 1xbb_A           88 EAESWMLVMEMAELGPLNKYLQQNRH------VKDKNIIELVHQVSMGMKYLEESNFVHRDLAAR  146 (291)
T ss_dssp             ESSSEEEEEECCTTEEHHHHHHHCTT------CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGG
T ss_pred             CCCCcEEEEEeCCCCCHHHHHHhCcC------CCHHHHHHHHHHHHHHHHHHHhCCeEcCCCCcc
Confidence            66789999999986 99999987543      899999999999999999999999999999973

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=99.77  E-value=5.1e-19  Score=174.71  Aligned_cols=129  Identities=20%  Similarity=0.239  Sum_probs=103.9

Q ss_pred             ceecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChh-------hHHHHHHHHHHHHHh----cccCCCCCCCe
Q 008813          410 TVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD-------FFDQSLDEIKLLKLV----NKNDPADEHHI  478 (552)
Q Consensus       410 dvi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~-------~~~~~lrEIkILk~L----~hhd~~d~pnI  478 (552)
                      +.+.++|++.+.||+|+||.||+|++..+++.||||+++....       ....+.+|+.+++++    +|      +||
T Consensus        27 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h------~~i  100 (312)
T 2iwi_A           27 EAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGH------PGV  100 (312)
T ss_dssp             ------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCC------SSB
T ss_pred             hhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCC------CCe
Confidence            4566899999999999999999999999999999999976421       123456799999999    55      999


Q ss_pred             eEeEeEEEeCCEEEEEEec-CCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          479 LRLYDYFYHLEHLFIVCEL-LRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       479 VrL~d~F~~~~hLyIVmEl-l~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      +++++++...+..++|||+ +.+ +|.+++.....      +++..++.++.||+.||.|||++||||+||++-
T Consensus       101 ~~~~~~~~~~~~~~~v~e~~~~~~~L~~~l~~~~~------~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~  168 (312)
T 2iwi_A          101 IRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGP------LGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDE  168 (312)
T ss_dssp             CCEEEEC-----CEEEEECCSSEEEHHHHHHHHCS------CCHHHHHHHHHHHHHHHHHHHHHTEECCCCSGG
T ss_pred             eeEEEEEecCCeEEEEEEecCCCCCHHHHHHhcCC------CCHHHHHHHHHHHHHHHHHHHHCCeeecCCChh
Confidence            9999999999999999998 555 99999987653      899999999999999999999999999999863

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=99.77  E-value=1.1e-18  Score=182.57  Aligned_cols=126  Identities=19%  Similarity=0.257  Sum_probs=108.0

Q ss_pred             cCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeC----
Q 008813          413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL----  488 (552)
Q Consensus       413 ~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~----  488 (552)
                      ..+|++++.||+|+||.||+|++..+++.||||++.....   ...+|+++|+.|+|      +|||+++++|...    
T Consensus        53 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~---~~~~E~~il~~l~h------pniv~l~~~~~~~~~~~  123 (420)
T 1j1b_A           53 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR---FKNRELQIMRKLDH------CNIVRLRYFFYSSGEKK  123 (420)
T ss_dssp             EEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT---SCCHHHHHHHTCCC------TTBCCEEEEEEEEETTT
T ss_pred             cceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch---hHHHHHHHHHHcCC------CCccceeeEEeccCCCC
Confidence            4579999999999999999999999999999999976543   23479999999998      9999999998642    


Q ss_pred             --CEEEEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          489 --EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       489 --~hLyIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                        .+++|||||+.++|.++++......  ..+++..++.|+.||+.||.|||++||||+|||+
T Consensus       124 ~~~~~~lv~e~~~~~l~~~~~~~~~~~--~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp  184 (420)
T 1j1b_A          124 DEVYLNLVLDYVPETVYRVARHYSRAK--QTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKP  184 (420)
T ss_dssp             TEEEEEEEEECCCEEHHHHHHHHHHTT--CCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSG
T ss_pred             cceeEEeehhcccccHHHHHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCh
Confidence              2478999999998888876532211  2389999999999999999999999999999997

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.77  E-value=2e-18  Score=169.69  Aligned_cols=135  Identities=19%  Similarity=0.200  Sum_probs=112.4

Q ss_pred             eecCceEEEEEeccCCceEEEEEEE-----CCCCcEEEEEEEecC--hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEe
Q 008813          411 VIAGRYYVTEYLGSAAFSKVFQAQD-----LHTGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYD  483 (552)
Q Consensus       411 vi~~RY~Ile~LGkG~FG~VykA~D-----kktg~~VAVKIIk~s--k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d  483 (552)
                      ...++|++.+.||+|+||.||+|.+     ..+++.||||+++..  ......+.+|+++++.+.+|     |||+++++
T Consensus        24 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h-----p~iv~~~~   98 (316)
T 2xir_A           24 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH-----LNVVNLLG   98 (316)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCC-----TTBCCEEE
T ss_pred             cchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccC-----CCeeeEEE
Confidence            3457899999999999999999985     356789999999864  23346788999999999654     99999999


Q ss_pred             EEEeCC-EEEEEEecCCC-CHHHHHHhhccCC----------CCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          484 YFYHLE-HLFIVCELLRA-NLYEFQKFNQESG----------GEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       484 ~F~~~~-hLyIVmEll~G-sL~d~Lk~~~~~g----------~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      ++...+ .+++||||+.+ +|.+++.......          ....+++..++.++.||+.||.|||++||||+|||+-
T Consensus        99 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~  177 (316)
T 2xir_A           99 ACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAAR  177 (316)
T ss_dssp             EECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGG
T ss_pred             EEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCCcccccCccc
Confidence            988754 59999999987 9999998654210          0012789999999999999999999999999999973

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=99.77  E-value=7.8e-19  Score=177.43  Aligned_cols=128  Identities=14%  Similarity=0.094  Sum_probs=104.5

Q ss_pred             eecCceEEEEEeccCCceEEEEEEECC---CCcEEEEEEEecChh------------hHHHHHHHHHHHHHhcccCCCCC
Q 008813          411 VIAGRYYVTEYLGSAAFSKVFQAQDLH---TGVDVCLKIIKNDKD------------FFDQSLDEIKLLKLVNKNDPADE  475 (552)
Q Consensus       411 vi~~RY~Ile~LGkG~FG~VykA~Dkk---tg~~VAVKIIk~sk~------------~~~~~lrEIkILk~L~hhd~~d~  475 (552)
                      ...++|++.+.||+|+||.||+|.+..   ++..||||++.....            ....+.+|+.+++.++|      
T Consensus        34 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h------  107 (345)
T 2v62_A           34 MEGNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDY------  107 (345)
T ss_dssp             TTSCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSC------
T ss_pred             ccCceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccc------
Confidence            345799999999999999999999987   788999999986421            11235677788888888      


Q ss_pred             CCeeEeEeEEEe----CCEEEEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          476 HHILRLYDYFYH----LEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       476 pnIVrL~d~F~~----~~hLyIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      +||+++++++..    ..++||||||++++|.+++.....      +++..++.|+.||+.||.|||++||||+|||+-
T Consensus       108 ~ni~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~------~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~  180 (345)
T 2v62_A          108 LGIPLFYGSGLTEFKGRSYRFMVMERLGIDLQKISGQNGT------FKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAA  180 (345)
T ss_dssp             CCCCCEEEEEEEESSSCEEEEEEEECEEEEHHHHCBGGGB------CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGG
T ss_pred             cCcceeecccccccCCCcEEEEEEeccCCCHHHHHHhcCC------CCHHHHHHHHHHHHHHHHHHHhCCeeCCCcCHH
Confidence            999999999988    789999999996699999887652      899999999999999999999999999999973

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.77  E-value=2.6e-18  Score=173.07  Aligned_cols=129  Identities=16%  Similarity=0.171  Sum_probs=112.0

Q ss_pred             eecCceEEEEEeccCCceEEEEEEECCCC----cEEEEEEEecC--hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeE
Q 008813          411 VIAGRYYVTEYLGSAAFSKVFQAQDLHTG----VDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDY  484 (552)
Q Consensus       411 vi~~RY~Ile~LGkG~FG~VykA~Dkktg----~~VAVKIIk~s--k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~  484 (552)
                      +...+|.+.+.||+|+||.||+|.+..++    ..||||+++..  ......+.+|+.+++.++|      |||++++++
T Consensus        41 i~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h------~~iv~~~~~  114 (333)
T 1mqb_A           41 IHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSH------HNIIRLEGV  114 (333)
T ss_dssp             CCTTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCC------TTBCCEEEE
T ss_pred             CChHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCC------CCCCcEEEE
Confidence            44578999999999999999999886543    46999999864  3344578899999999998      999999999


Q ss_pred             EEeCCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          485 FYHLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       485 F~~~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      +...+.++|||||+.+ +|.++++....     .+++..++.++.||+.||.|||++||||+|||+-
T Consensus       115 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~  176 (333)
T 1mqb_A          115 ISKYKPMMIITEYMENGALDKFLREKDG-----EFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAAR  176 (333)
T ss_dssp             ECSSSSEEEEEECCTTEEHHHHHHHTTT-----CSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGG
T ss_pred             EecCCCcEEEEeCCCCCcHHHHHHhCCC-----CCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChh
Confidence            9999999999999987 99999986542     2899999999999999999999999999999973

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=99.77  E-value=3.8e-18  Score=172.39  Aligned_cols=126  Identities=16%  Similarity=0.184  Sum_probs=105.8

Q ss_pred             ceecCceEEEE-EeccCCceEEEEEEECCCCcEEEEEEEecChhhHHHHHHHHHH-HHHhcccCCCCCCCeeEeEeEEEe
Q 008813          410 TVIAGRYYVTE-YLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKL-LKLVNKNDPADEHHILRLYDYFYH  487 (552)
Q Consensus       410 dvi~~RY~Ile-~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~~~~~~lrEIkI-Lk~L~hhd~~d~pnIVrL~d~F~~  487 (552)
                      ..+.++|++++ .||+|+||.||+|.++.+++.||||++.....    ..+|+.. ++.++|      +||+++++++..
T Consensus        24 ~~~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~e~~~~~~~~~h------~~i~~~~~~~~~   93 (336)
T 3fhr_A           24 YAVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPK----ARQEVDHHWQASGG------PHIVCILDVYEN   93 (336)
T ss_dssp             SCGGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSHH----HHHHHHHHHHHTTS------TTBCCEEEEEEE
T ss_pred             ccccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcHH----HHHHHHHHHHhcCC------CChHHHHHHHhh
Confidence            35678999965 69999999999999999999999999986543    2334433 445565      999999999986


Q ss_pred             ----CCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          488 ----LEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       488 ----~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                          ...++|||||+.+ +|.+++......    ++++..++.|+.||+.||.|||++||||+|||+
T Consensus        94 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~----~l~~~~~~~i~~ql~~~l~~LH~~~ivH~dlkp  156 (336)
T 3fhr_A           94 MHHGKRCLLIIMECMEGGELFSRIQERGDQ----AFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKP  156 (336)
T ss_dssp             EETTEEEEEEEEECCTTEEHHHHHHTC-CC----CCBHHHHHHHHHHHHHHHHHHHHTTEECSCCSG
T ss_pred             ccCCCceEEEEEeccCCCCHHHHHHhcCCC----CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCH
Confidence                4569999999987 999999876532    299999999999999999999999999999997

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.77  E-value=4.3e-18  Score=166.51  Aligned_cols=126  Identities=17%  Similarity=0.185  Sum_probs=109.2

Q ss_pred             cCceEEEE-EeccCCceEEEEEEEC--CCCcEEEEEEEecC--hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEe
Q 008813          413 AGRYYVTE-YLGSAAFSKVFQAQDL--HTGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH  487 (552)
Q Consensus       413 ~~RY~Ile-~LGkG~FG~VykA~Dk--ktg~~VAVKIIk~s--k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~  487 (552)
                      .++|.+++ .||+|+||.||+|.+.  .+++.||||+++..  ....+.+.+|+++++.++|      |||+++++++ .
T Consensus         8 ~~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h------~~i~~~~~~~-~   80 (287)
T 1u59_A            8 RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDN------PYIVRLIGVC-Q   80 (287)
T ss_dssp             GGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCC------TTBCCEEEEE-E
T ss_pred             HHHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCC------CCEeEEEEEe-c
Confidence            46788887 9999999999999864  46788999999863  3455778999999999988      9999999999 5


Q ss_pred             CCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          488 LEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       488 ~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      .+.+++|||++.+ +|.+++.....     .+++..++.++.||+.||.|||++||+|+||++-
T Consensus        81 ~~~~~lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~  139 (287)
T 1u59_A           81 AEALMLVMEMAGGGPLHKFLVGKRE-----EIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAAR  139 (287)
T ss_dssp             SSSEEEEEECCTTEEHHHHHTTCTT-----TSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGG
T ss_pred             CCCcEEEEEeCCCCCHHHHHHhCCc-----cCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCchh
Confidence            6679999999987 99999875432     2899999999999999999999999999999973

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=99.77  E-value=3e-20  Score=186.42  Aligned_cols=128  Identities=21%  Similarity=0.154  Sum_probs=100.8

Q ss_pred             cCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecCh---------hhHHHHHHHHHHHHHhcccC---CCCCCCeeE
Q 008813          413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK---------DFFDQSLDEIKLLKLVNKND---PADEHHILR  480 (552)
Q Consensus       413 ~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk---------~~~~~~lrEIkILk~L~hhd---~~d~pnIVr  480 (552)
                      .++|++++.||+|+||+||+|++  +++.||||+++...         ...+.+.+|+.+|+.|+...   ...|+|||+
T Consensus        19 ~~~y~~~~~lG~G~~g~V~~~~~--~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~   96 (336)
T 2vuw_A           19 TEKLQRCEKIGEGVFGEVFQTIA--DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIG   96 (336)
T ss_dssp             HHHHHTCEEEEEETTEEEEEEEE--TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCC
T ss_pred             cccchheeeecccCceEEEEEEe--CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhh
Confidence            47899999999999999999998  68999999998642         12367889999999997100   001266666


Q ss_pred             eEeEE-----------------Ee-------------CCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHH
Q 008813          481 LYDYF-----------------YH-------------LEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTF  529 (552)
Q Consensus       481 L~d~F-----------------~~-------------~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~Q  529 (552)
                      +.+.+                 ..             .+++||||||+.+ +|.+.+...       .+++..++.|+.|
T Consensus        97 l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~~-------~~~~~~~~~i~~q  169 (336)
T 2vuw_A           97 LNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRTK-------LSSLATAKSILHQ  169 (336)
T ss_dssp             EEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTTT-------CCCHHHHHHHHHH
T ss_pred             hcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHhc-------CCCHHHHHHHHHH
Confidence            66654                 32             6889999999865 555554331       1899999999999


Q ss_pred             HHHHHHHHH-hCCCeeeeccc
Q 008813          530 LLTLLMLIF-LLLVIYFILFC  549 (552)
Q Consensus       530 IL~AL~YLH-s~gIIH~~L~~  549 (552)
                      |+.||.||| ++||||+|||+
T Consensus       170 i~~aL~~lH~~~~ivHrDlKp  190 (336)
T 2vuw_A          170 LTASLAVAEASLRFEHRDLHW  190 (336)
T ss_dssp             HHHHHHHHHHHHCCBCSCCCG
T ss_pred             HHHHHHHHHHhCCEeECCCCH
Confidence            999999999 99999999997

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.77  E-value=1.3e-18  Score=172.48  Aligned_cols=131  Identities=15%  Similarity=0.228  Sum_probs=111.8

Q ss_pred             CCcceeeCceecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChhhHHHHHHHHHHHHHh--cccCCCCCCCee
Q 008813          402 KDLPIILNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLV--NKNDPADEHHIL  479 (552)
Q Consensus       402 ~~y~v~~gdvi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~~~~~~lrEIkILk~L--~hhd~~d~pnIV  479 (552)
                      ..+++..+..+.++|++++.||+|+||.||+|++.  ++.||||++.....  ....+|.+++..+  +|      +||+
T Consensus        25 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~--~~~~~e~~~~~~~~~~h------~~i~   94 (337)
T 3mdy_A           25 SGLPLLVQRTIAKQIQMVKQIGKGRYGEVWMGKWR--GEKVAVKVFFTTEE--ASWFRETEIYQTVLMRH------ENIL   94 (337)
T ss_dssp             SSSCHHHHTTHHHHCEEEEEEEEETTEEEEEEEET--TEEEEEEEEEGGGH--HHHHHHHHHHTSTTCCC------TTBC
T ss_pred             CCCCcccccccccceEEEeEeecCCCeEEEEEEEC--CceEEEEEEecccc--chhhhHHHHHHHHhhcC------CCee
Confidence            34556666778889999999999999999999885  88999999976533  3445666666554  55      9999


Q ss_pred             EeEeEEEeC----CEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhC--------CCeeee
Q 008813          480 RLYDYFYHL----EHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLL--------LVIYFI  546 (552)
Q Consensus       480 rL~d~F~~~----~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~--------gIIH~~  546 (552)
                      ++++++...    ..+||||||+.+ +|.++++...       +++..++.|+.||+.||.|||++        ||||+|
T Consensus        95 ~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~-------~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~D  167 (337)
T 3mdy_A           95 GFIAADIKGTGSWTQLYLITDYHENGSLYDYLKSTT-------LDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRD  167 (337)
T ss_dssp             CEEEEEEESCGGGCEEEEEECCCTTCBHHHHHHHCC-------BCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSC
T ss_pred             eEEEEEccCCCCCCceEEEEeccCCCcHHHHhhccC-------CCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecc
Confidence            999999987    789999999987 9999997642       89999999999999999999999        999999


Q ss_pred             ccc
Q 008813          547 LFC  549 (552)
Q Consensus       547 L~~  549 (552)
                      ||+
T Consensus       168 ikp  170 (337)
T 3mdy_A          168 LKS  170 (337)
T ss_dssp             CCG
T ss_pred             cch
Confidence            997

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=99.77  E-value=3.1e-19  Score=182.74  Aligned_cols=134  Identities=13%  Similarity=0.102  Sum_probs=105.3

Q ss_pred             cCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC----hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeE------
Q 008813          413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND----KDFFDQSLDEIKLLKLVNKNDPADEHHILRLY------  482 (552)
Q Consensus       413 ~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s----k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~------  482 (552)
                      .++|++.+.||+|+||+||+|++..+++.||||+++..    ....+.+.+|+.+|+.+..   ..|||||+++      
T Consensus        72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~---l~hpniv~~~~~~~~~  148 (377)
T 3byv_A           72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRG---IKNQKQAKVHLRFIFP  148 (377)
T ss_dssp             CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTT---CCSHHHHHHHHCBCCC
T ss_pred             CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccc---cCCHHHHHHHhhhhhh
Confidence            46899999999999999999999999999999999742    3345778899965555542   1129999998      


Q ss_pred             -eEEEeCC-----------------EEEEEEecCCCCHHHHHHhhccCCC-CcCCCHHHHHHHHHHHHHHHHHHHhCCCe
Q 008813          483 -DYFYHLE-----------------HLFIVCELLRANLYEFQKFNQESGG-EAYFTLGRLQVCSTFLLTLLMLIFLLLVI  543 (552)
Q Consensus       483 -d~F~~~~-----------------hLyIVmEll~GsL~d~Lk~~~~~g~-~~pLSe~~I~~Ia~QIL~AL~YLHs~gII  543 (552)
                       +++...+                 ..||||||++|+|.++++....... ..++++..++.|+.||+.||.|||++|||
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~iv  228 (377)
T 3byv_A          149 FDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLV  228 (377)
T ss_dssp             SEEEECTTSCSEEEC------CEEESEEEEEECCSEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred             hhhhhccCCccccccccCCCceEEEEEEEEEeccCCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCCee
Confidence             6666553                 3899999998899999987643100 01133488888999999999999999999


Q ss_pred             eeeccc
Q 008813          544 YFILFC  549 (552)
Q Consensus       544 H~~L~~  549 (552)
                      |+|||+
T Consensus       229 HrDikp  234 (377)
T 3byv_A          229 HTYLRP  234 (377)
T ss_dssp             CSCCCG
T ss_pred             cCCCCH
Confidence            999997

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.77  E-value=1.3e-18  Score=183.64  Aligned_cols=128  Identities=17%  Similarity=0.196  Sum_probs=112.0

Q ss_pred             ceecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCC
Q 008813          410 TVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE  489 (552)
Q Consensus       410 dvi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~  489 (552)
                      .+..++|++.+.||+|+||.||+|.+.. +..||||+++......+.+.+|+.+|+.|+|      |||+++++++.. +
T Consensus       180 ~i~~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h------p~iv~~~~~~~~-~  251 (452)
T 1fmk_A          180 EIPRESLRLEVKLGQGCFGEVWMGTWNG-TTRVAIKTLKPGTMSPEAFLQEAQVMKKLRH------EKLVQLYAVVSE-E  251 (452)
T ss_dssp             BCCGGGEEEEEEEEECSSCEEEEEEETT-TEEEEEEECCTTSSCHHHHHHHHHHHHHCCC------TTBCCEEEEECS-S
T ss_pred             ccChhHceeeeeecCCCCeEEEEEEECC-CceEEEEEeccCCCCHHHHHHHHHHHHhCCC------CCEeeEEEEEcC-C
Confidence            3455789999999999999999999875 4669999998754445678999999999998      999999999865 7


Q ss_pred             EEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          490 HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       490 hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      .+||||||+.+ +|.++++......    +++..+..|+.||+.||.|||+++|||+|||+
T Consensus       252 ~~~iv~e~~~~gsL~~~l~~~~~~~----~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp  308 (452)
T 1fmk_A          252 PIYIVTEYMSKGSLLDFLKGETGKY----LRLPQLVDMAAQIASGMAYVERMNYVHRDLRA  308 (452)
T ss_dssp             SCEEEECCCTTCBHHHHHSHHHHTT----CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSG
T ss_pred             ceEEEehhhcCCCHHHHHHhcCCCC----CCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCh
Confidence            79999999976 9999998654322    89999999999999999999999999999997

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.77  E-value=1.5e-18  Score=170.17  Aligned_cols=128  Identities=18%  Similarity=0.200  Sum_probs=109.0

Q ss_pred             eCceecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC---hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeE
Q 008813          408 LNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDY  484 (552)
Q Consensus       408 ~gdvi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s---k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~  484 (552)
                      .+++..++|++.+.||+|+||.||+|.+..   .||||+++..   ....+.+.+|+.+|+.++|      +||++++++
T Consensus        18 ~~ei~~~~y~~~~~lG~G~~g~Vy~~~~~~---~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h------~~iv~~~~~   88 (289)
T 3og7_A           18 DWEIPDGQITVGQRIGSGSFGTVYKGKWHG---DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH------VNILLFMGY   88 (289)
T ss_dssp             CCBCCTTSCEEEEEEEECSSEEEEEEESSS---EEEEEEESCSSCCHHHHHHHHHHHHHHTTCCC------TTBCCEEEE
T ss_pred             CCccCccceeeeeEecCCCCeEEEEEEEcC---ceEEEEEeccCCCHHHHHHHHHHHHHHHhCCC------CcEEEEEee
Confidence            446778899999999999999999998653   5999999754   3345678899999999998      999999995


Q ss_pred             EEeCCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          485 FYHLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       485 F~~~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      . ...++++||||+.+ +|.+++.....     .+++..++.|+.||+.||.|||++||||+|||+-
T Consensus        89 ~-~~~~~~lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~i~~qi~~~L~~lH~~~i~H~Dlkp~  149 (289)
T 3og7_A           89 S-TAPQLAIVTQWCEGSSLYHHLHASET-----KFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSN  149 (289)
T ss_dssp             E-CSSSCEEEEECCCEEEHHHHHTTC--------CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGG
T ss_pred             c-cCCccEEEEEecCCCcHHHHHhhccC-----CCCHHHHHHHHHHHHHHHHHHHhCCcccccCccc
Confidence            4 56678999999987 99999865443     2899999999999999999999999999999973

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=99.77  E-value=2e-18  Score=185.61  Aligned_cols=129  Identities=13%  Similarity=0.216  Sum_probs=114.5

Q ss_pred             ceecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCC
Q 008813          410 TVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE  489 (552)
Q Consensus       410 dvi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~  489 (552)
                      ..+.++|+++++||+|+||.||+|.+..+++.||||++..... ...+.+|+++++.|.|+     ++|+.+..++...+
T Consensus         3 ~~i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~-~~~~~~E~~il~~L~~~-----~~i~~i~~~~~~~~   76 (483)
T 3sv0_A            3 PRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-HPQLLYESKIYRILQGG-----TGIPNVRWFGVEGD   76 (483)
T ss_dssp             CEETTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS-SCCHHHHHHHHHHTTTS-----TTCCCEEEEEEETT
T ss_pred             CCcCCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc-cHHHHHHHHHHHHhcCC-----CCCCeEEEEEeeCC
Confidence            3567899999999999999999999999999999999876432 34578999999999986     77888888888889


Q ss_pred             EEEEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          490 HLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       490 hLyIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ..+|||||++++|.+++......     +++..++.|+.||+.||.|||++||||+|||+
T Consensus        77 ~~~lvme~~g~sL~~ll~~~~~~-----l~~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP  131 (483)
T 3sv0_A           77 YNVLVMDLLGPSLEDLFNFCSRK-----LSLKTVLMLADQMINRVEFVHSKSFLHRDIKP  131 (483)
T ss_dssp             EEEEEEECCCCBHHHHHHHTTTC-----CCHHHHHHHHHHHHHHHHHHHHTTEECCCCCG
T ss_pred             EEEEEEECCCCCHHHHHHhhcCC-----CCHHHHHHHHHHHHHHHHHHHHCCEeecccCc
Confidence            99999999977999999865432     89999999999999999999999999999997

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.76  E-value=6.5e-19  Score=176.22  Aligned_cols=131  Identities=11%  Similarity=0.144  Sum_probs=114.0

Q ss_pred             eCceecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChhh------------------HHHHHHHHHHHHHhcc
Q 008813          408 LNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDF------------------FDQSLDEIKLLKLVNK  469 (552)
Q Consensus       408 ~gdvi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~~------------------~~~~lrEIkILk~L~h  469 (552)
                      .++...++|++++.||+|+||.||+|.+  +++.||||++......                  .+.+.+|+.+++.++|
T Consensus        25 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h  102 (348)
T 2pml_X           25 EKDKYINDYRIIRTLNQGKFNKIILCEK--DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKN  102 (348)
T ss_dssp             SSCEEETTEEEEEEEECCSSCCEEEEEE--TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCC
T ss_pred             hcccccCceEEEEEEcCCCCeEEEEEEc--CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCC
Confidence            4456678999999999999999999999  8999999999754211                  1778999999999998


Q ss_pred             cCCCCCCCeeEeEeEEEeCCEEEEEEecCCC-CHHHH------HHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHh-CC
Q 008813          470 NDPADEHHILRLYDYFYHLEHLFIVCELLRA-NLYEF------QKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFL-LL  541 (552)
Q Consensus       470 hd~~d~pnIVrL~d~F~~~~hLyIVmEll~G-sL~d~------Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs-~g  541 (552)
                            |||+++++++...+++||||||+.+ +|.++      +.....    .++++..++.++.||+.||.|||+ +|
T Consensus       103 ------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~----~~~~~~~~~~i~~qi~~~l~~lH~~~~  172 (348)
T 2pml_X          103 ------EYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYT----CFIPIQVIKCIIKSVLNSFSYIHNEKN  172 (348)
T ss_dssp             ------TTBCCCSEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSC----CCCCHHHHHHHHHHHHHHHHHHHHTSC
T ss_pred             ------CCcceEEEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccc----cCCCHHHHHHHHHHHHHHHHHHhccCC
Confidence                  9999999999999999999999987 99988      544222    239999999999999999999999 99


Q ss_pred             Ceeeecccc
Q 008813          542 VIYFILFCF  550 (552)
Q Consensus       542 IIH~~L~~~  550 (552)
                      |+|+||++-
T Consensus       173 i~H~dl~p~  181 (348)
T 2pml_X          173 ICHRDVKPS  181 (348)
T ss_dssp             EECCCCCGG
T ss_pred             EeecCCChH
Confidence            999999863

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.76  E-value=2.8e-18  Score=167.11  Aligned_cols=123  Identities=15%  Similarity=0.147  Sum_probs=107.4

Q ss_pred             EEEeccCCceEEEEEEECCCCcEEEEEEEecC-hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEEEEEEec
Q 008813          419 TEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND-KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCEL  497 (552)
Q Consensus       419 le~LGkG~FG~VykA~Dkktg~~VAVKIIk~s-k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hLyIVmEl  497 (552)
                      ...||+|+||.||+|.+..+++.||||+++.. ....+.+.+|+.+++.++|      |||+++++++...+.++||||+
T Consensus        27 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h------~~iv~~~~~~~~~~~~~lv~e~  100 (295)
T 2clq_A           27 RVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKH------KNIVQYLGSFSENGFIKIFMEQ  100 (295)
T ss_dssp             BCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCC------TTBCCEEEEEEETTEEEEEEEC
T ss_pred             cEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCC------CCEeeEeeEEEeCCcEEEEEEe
Confidence            34899999999999999999999999999764 3345678899999999998      9999999999999999999999


Q ss_pred             CCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          498 LRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       498 l~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      +.+ +|.+++......   ..+++..++.++.||+.||.|||++||+|++|++-
T Consensus       101 ~~~~~L~~~l~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~  151 (295)
T 2clq_A          101 VPGGSLSALLRSKWGP---LKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGD  151 (295)
T ss_dssp             CSEEEHHHHHHHTTCC---CTTCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGG
T ss_pred             CCCCCHHHHHHhhccC---CCccHHHHHHHHHHHHHHHHHHHhCCEEccCCChh
Confidence            976 999999875321   23789999999999999999999999999999863

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.76  E-value=1.5e-18  Score=187.58  Aligned_cols=128  Identities=17%  Similarity=0.196  Sum_probs=112.4

Q ss_pred             ceecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCC
Q 008813          410 TVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE  489 (552)
Q Consensus       410 dvi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~  489 (552)
                      .+..++|++.+.||+|+||.||+|.+.. +..||||+++......+.+.+|+++|+.|+|      +|||++++++.. +
T Consensus       263 ~i~~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h------pniv~~~~~~~~-~  334 (535)
T 2h8h_A          263 EIPRESLRLEVKLGQGCFGEVWMGTWNG-TTRVAIKTLKPGTMSPEAFLQEAQVMKKLRH------EKLVQLYAVVSE-E  334 (535)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEETT-TEEEEEEEECTTSSCHHHHHHHHHHHHHCCC------TTBCCEEEEECS-S
T ss_pred             ecchhhhhhheecccCCCeEEEEEEECC-CceEEEEEeCCCCCCHHHHHHHHHHHHhCCC------CCEeeEEEEEee-c
Confidence            4556789999999999999999999875 4679999998754445778999999999998      999999999865 7


Q ss_pred             EEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          490 HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       490 hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      .+||||||+.+ +|.++++......    +++..++.|+.||+.||.|||+++|||+|||+
T Consensus       335 ~~~lv~e~~~~gsL~~~l~~~~~~~----l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp  391 (535)
T 2h8h_A          335 PIYIVTEYMSKGSLLDFLKGETGKY----LRLPQLVDMAAQIASGMAYVERMNYVHRDLRA  391 (535)
T ss_dssp             SCEEEECCCTTEEHHHHHSHHHHTT----CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSG
T ss_pred             cceEeeehhcCCcHHHHHhhcCCCC----CCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCH
Confidence            79999999987 9999998654322    89999999999999999999999999999996

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=99.76  E-value=1.9e-18  Score=173.64  Aligned_cols=129  Identities=20%  Similarity=0.224  Sum_probs=101.1

Q ss_pred             cCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCC---
Q 008813          413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE---  489 (552)
Q Consensus       413 ~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~---  489 (552)
                      .++|++.+.||+|+||.||+|++..+++.||||++...........+|++.++.++|      |||++++++|...+   
T Consensus        22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~l~~l~h------~niv~~~~~~~~~~~~~   95 (360)
T 3e3p_A           22 MDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVLHH------PNIVQLQSYFYTLGERD   95 (360)
T ss_dssp             HTTEEEC----------CEEEEETTTCCEEEEEEEECCTTCCCHHHHHHHHHHHHCC------TTBCCEEEEEEEECSSC
T ss_pred             ccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCccccHHHHHHHHHHHhcCC------CCcccHHHhhhcccccc
Confidence            468999999999999999999999999999999998765555667788888999988      99999999997643   


Q ss_pred             ----EEEEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHH--hCCCeeeeccc
Q 008813          490 ----HLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIF--LLLVIYFILFC  549 (552)
Q Consensus       490 ----hLyIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLH--s~gIIH~~L~~  549 (552)
                          +++|||||+.++|...+.......  ..+++..++.++.||+.||.|||  ++||||+|||+
T Consensus        96 ~~~~~~~lv~e~~~~~l~~~~~~~~~~~--~~~~~~~~~~~~~qi~~al~~lH~~~~~ivH~Dlkp  159 (360)
T 3e3p_A           96 RRDIYLNVVMEYVPDTLHRCCRNYYRRQ--VAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKP  159 (360)
T ss_dssp             TTCEEEEEEEECCSCBHHHHHHHHHTTT--CCCCHHHHHHHHHHHHHHHHHHTSTTTCCBCSCCCG
T ss_pred             ccceeEEEEeecccccHHHHHHHHhhcc--cCCCHHHHHHHHHHHHHHHHHHhCCCCCeecCcCCH
Confidence                389999999998887766432211  23899999999999999999999  99999999997

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=99.76  E-value=9.4e-19  Score=176.75  Aligned_cols=125  Identities=22%  Similarity=0.283  Sum_probs=110.8

Q ss_pred             ecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC---hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeC
Q 008813          412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL  488 (552)
Q Consensus       412 i~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s---k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~  488 (552)
                      +.++|.+.+.||+|+||.||+|.+..+++.||||++...   ......+.+|+.+|+.++|      |||+++++++...
T Consensus        22 l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h------~~iv~~~~~~~~~   95 (353)
T 3coi_A           22 LPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQH------ENVIGLLDVFTPA   95 (353)
T ss_dssp             EETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCC------TTBCCCSEEECSC
T ss_pred             cCceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCC------CCcccHhheEecc
Confidence            457999999999999999999999999999999999753   3345678899999999998      9999999999876


Q ss_pred             CE------EEEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          489 EH------LFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       489 ~h------LyIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      ..      +|+||||+.++|.+++..        .+++..++.++.||+.||.|||++||||+|||+-
T Consensus        96 ~~~~~~~~~~lv~e~~~~~l~~~~~~--------~~~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~  155 (353)
T 3coi_A           96 SSLRNFYDFYLVMPFMQTDLQKIMGL--------KFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPG  155 (353)
T ss_dssp             SSGGGCCCCEEEEECCSEEGGGTTTS--------CCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGG
T ss_pred             cccccceeEEEEeccccCCHHHHhcC--------CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHH
Confidence            54      599999999988877642        1899999999999999999999999999999973

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.76  E-value=3.4e-18  Score=171.49  Aligned_cols=125  Identities=16%  Similarity=0.196  Sum_probs=103.0

Q ss_pred             cCceEEEEEeccCCceEEEEEEECCCCcEE----EEEEEecC--hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEE
Q 008813          413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDV----CLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFY  486 (552)
Q Consensus       413 ~~RY~Ile~LGkG~FG~VykA~Dkktg~~V----AVKIIk~s--k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~  486 (552)
                      ..+|++++.||+|+||.||+|++..+++.+    |+|.++..  ....+.+.+|+.+++.++|      |||+++++++.
T Consensus        14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h------~~iv~~~~~~~   87 (327)
T 3poz_A           14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN------PHVCRLLGICL   87 (327)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCB------TTBCCEEEEEE
T ss_pred             HHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCC------CCEeEEEEEEe
Confidence            478999999999999999999998877654    77766542  2345678899999999998      99999999998


Q ss_pred             eCCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          487 HLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       487 ~~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ... .++|||++.+ +|.+++......     +++..++.|+.||+.||.|||++||||+|||+
T Consensus        88 ~~~-~~~v~e~~~~g~L~~~l~~~~~~-----~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp  145 (327)
T 3poz_A           88 TST-VQLITQLMPFGCLLDYVREHKDN-----IGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAA  145 (327)
T ss_dssp             SSS-EEEEEECCTTCBHHHHHHHSTTS-----CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCG
T ss_pred             cCC-eEEEEEecCCCcHHHHHHhcCCC-----CCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCh
Confidence            765 6788888776 999999875432     89999999999999999999999999999997

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.76  E-value=4.3e-18  Score=168.15  Aligned_cols=132  Identities=14%  Similarity=0.170  Sum_probs=107.8

Q ss_pred             cCceEEEEEeccCCceEEEEEEECC---CCcEEEEEEEecC---hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEE
Q 008813          413 AGRYYVTEYLGSAAFSKVFQAQDLH---TGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFY  486 (552)
Q Consensus       413 ~~RY~Ile~LGkG~FG~VykA~Dkk---tg~~VAVKIIk~s---k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~  486 (552)
                      .++|.+.+.||+|+||.||+|.+..   +++.||||+++..   ....+.+.+|+.+++.++|      |||+++++++.
T Consensus        33 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h------~~iv~~~~~~~  106 (313)
T 3brb_A           33 RNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSH------PNVIRLLGVCI  106 (313)
T ss_dssp             GGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCC------TTBCCCCEEEE
T ss_pred             HHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCC------CCeeeeeEEEe
Confidence            4689999999999999999998765   5668999998753   3345678899999999998      99999999998


Q ss_pred             eCC-----EEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          487 HLE-----HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       487 ~~~-----hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      ...     ..++||||+.+ +|.+++...........+++..++.|+.||+.||.|||++||+|+|||+-
T Consensus       107 ~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~  176 (313)
T 3brb_A          107 EMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAAR  176 (313)
T ss_dssp             C-------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCSGG
T ss_pred             eccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcc
Confidence            654     46999999987 99999975432222334999999999999999999999999999999973

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=99.76  E-value=1.2e-18  Score=180.05  Aligned_cols=132  Identities=16%  Similarity=0.215  Sum_probs=104.4

Q ss_pred             eecCceEE-EEEeccCCceEEEEEEEC--CCCcEEEEEEEecChhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEe
Q 008813          411 VIAGRYYV-TEYLGSAAFSKVFQAQDL--HTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH  487 (552)
Q Consensus       411 vi~~RY~I-le~LGkG~FG~VykA~Dk--ktg~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~  487 (552)
                      .+.++|++ .++||+|+||.||+|+++  .+++.||||++.... ....+.+|+.+|+.|+|      ||||+++++|..
T Consensus        17 ~~~~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~E~~~l~~l~h------pniv~~~~~~~~   89 (405)
T 3rgf_A           17 RVEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG-ISMSACREIALLRELKH------PNVISLQKVFLS   89 (405)
T ss_dssp             CHHHHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSS-CCHHHHHHHHHHHHCCC------TTBCCCCEEEEE
T ss_pred             hhhhhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC-CCHHHHHHHHHHHhcCC------CCeeeEeeEEec
Confidence            34567877 458999999999999966  578899999997543 34568899999999998      999999999965


Q ss_pred             --CCEEEEEEecCCCCHHHHHHhhccC---CCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          488 --LEHLFIVCELLRANLYEFQKFNQES---GGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       488 --~~hLyIVmEll~GsL~d~Lk~~~~~---g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                        ..++||||||+.++|.+++......   .....+++..++.|+.||+.||.|||++||||+|||+
T Consensus        90 ~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~Dlkp  156 (405)
T 3rgf_A           90 HADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKP  156 (405)
T ss_dssp             TTTTEEEEEEECCSEEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCG
T ss_pred             CCCCeEEEEEeCCCCCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCEeCCCcCH
Confidence              6789999999999999988744311   1112389999999999999999999999999999997

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=99.76  E-value=2.4e-18  Score=178.35  Aligned_cols=129  Identities=19%  Similarity=0.274  Sum_probs=106.9

Q ss_pred             CceecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeC
Q 008813          409 NTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL  488 (552)
Q Consensus       409 gdvi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~  488 (552)
                      ++....+|++++.||+|+||.||+|++..+++ ||+|++......   ..+|+++|+.++|      +||++++++|...
T Consensus        35 ~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~-~aikk~~~~~~~---~~~E~~il~~l~h------~niv~l~~~~~~~  104 (394)
T 4e7w_A           35 GEQREIAYTNCKVIGNGSFGVVFQAKLVESDE-VAIKKVLQDKRF---KNRELQIMRIVKH------PNVVDLKAFFYSN  104 (394)
T ss_dssp             CCEEEEEEEEEEEEEEETTEEEEEEEETTTEE-EEEEEEECCTTS---CCHHHHHHHTCCC------TTBCCEEEEEEEE
T ss_pred             CCcccceEEEeEEEeeCCCeEEEEEEECCCCe-EEEEEEecCcch---HHHHHHHHHhCCC------CCcceEEEEEEec
Confidence            34566789999999999999999999987766 888877654332   2479999999998      9999999999754


Q ss_pred             C------EEEEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          489 E------HLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       489 ~------hLyIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      +      +++|||||+.++|...+.......  ..+++..++.|+.||+.||.|||++||||+|||+
T Consensus       105 ~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp  169 (394)
T 4e7w_A          105 GDKKDEVFLNLVLEYVPETVYRASRHYAKLK--QTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKP  169 (394)
T ss_dssp             SSSSSCEEEEEEEECCSEEHHHHHHHHHHTT--SCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSG
T ss_pred             CCCCCceEEEEEeeccCccHHHHHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCH
Confidence            3      389999999998777665432211  2389999999999999999999999999999997

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.76  E-value=1.2e-18  Score=193.08  Aligned_cols=130  Identities=18%  Similarity=0.248  Sum_probs=112.2

Q ss_pred             eeeCceecCceEEEEEeccCCceEEEEEEECC-CCcEEEEEEEecC--hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeE
Q 008813          406 IILNTVIAGRYYVTEYLGSAAFSKVFQAQDLH-TGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLY  482 (552)
Q Consensus       406 v~~gdvi~~RY~Ile~LGkG~FG~VykA~Dkk-tg~~VAVKIIk~s--k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~  482 (552)
                      +..++++.++|++++.||+|+||.||+|.+.. +++.||||++...  ......+.+|+.+|+.++|      ||||+++
T Consensus        72 ~~~g~~~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h------p~iv~~~  145 (681)
T 2pzi_A           72 LNPGDIVAGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVH------PSIVQIF  145 (681)
T ss_dssp             SCTTCEETTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCC------TTBCCEE
T ss_pred             CCCCCEeCCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCC------CCcCeEe
Confidence            45677888999999999999999999999986 7899999998653  3445678899999999998      9999999


Q ss_pred             eEEEeCCE-----EEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          483 DYFYHLEH-----LFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       483 d~F~~~~h-----LyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      +++...+.     +||||||+.+ +|.+++..        ++++..++.|+.||+.||.|||++||||+|||+
T Consensus       146 ~~~~~~~~~~~~~~~lv~E~~~g~~L~~~~~~--------~l~~~~~~~~~~qi~~aL~~lH~~giiHrDlkp  210 (681)
T 2pzi_A          146 NFVEHTDRHGDPVGYIVMEYVGGQSLKRSKGQ--------KLPVAEAIAYLLEILPALSYLHSIGLVYNDLKP  210 (681)
T ss_dssp             EEEEEECTTSCEEEEEEEECCCCEECC----C--------CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSG
T ss_pred             eeEeecCCCCCceeEEEEEeCCCCcHHHHHhC--------CCCHHHHHHHHHHHHHHHHHHHHCCCeecccCh
Confidence            99987655     7999999987 89887654        189999999999999999999999999999997

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.76  E-value=5.7e-18  Score=164.77  Aligned_cols=128  Identities=18%  Similarity=0.235  Sum_probs=109.9

Q ss_pred             eecCceEEEEEeccCCceEEEEEEECC---CCcEEEEEEEecC--hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEE
Q 008813          411 VIAGRYYVTEYLGSAAFSKVFQAQDLH---TGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYF  485 (552)
Q Consensus       411 vi~~RY~Ile~LGkG~FG~VykA~Dkk---tg~~VAVKIIk~s--k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F  485 (552)
                      +..++|.+.+.||+|+||.||+|.+..   ++..||||+++..  ....+.+.+|+.+++.++|      |||+++++++
T Consensus         9 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h------~~i~~~~~~~   82 (281)
T 3cc6_A            9 IAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDH------PHIVKLIGII   82 (281)
T ss_dssp             CCGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCC------TTBCCEEEEE
T ss_pred             ecccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCC------CCcceEEEEE
Confidence            445789999999999999999998653   3456999999864  3345678899999999998      9999999998


Q ss_pred             EeCCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          486 YHLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       486 ~~~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      .. +..|+|||++.+ +|.++++.....     +++..++.++.||+.||.|||++||+|+|||+-
T Consensus        83 ~~-~~~~~v~e~~~~~~L~~~l~~~~~~-----~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~  142 (281)
T 3cc6_A           83 EE-EPTWIIMELYPYGELGHYLERNKNS-----LKVLTLVLYSLQICKAMAYLESINCVHRDIAVR  142 (281)
T ss_dssp             CS-SSCEEEEECCTTCBHHHHHHHHTTT-----CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGG
T ss_pred             cC-CCCEEEEecCCCCCHHHHHHhcccc-----CCHHHHHHHHHHHHHHHHHHHHCCcccCCCccc
Confidence            64 457999999986 999999876432     899999999999999999999999999999863

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.76  E-value=3.3e-18  Score=167.51  Aligned_cols=125  Identities=14%  Similarity=0.087  Sum_probs=107.1

Q ss_pred             CceEEEEEeccCCceEEEEEEECCC---CcEEEEEEEecC--hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEE-e
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLHT---GVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFY-H  487 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkkt---g~~VAVKIIk~s--k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~-~  487 (552)
                      .+|++.+.||+|+||.||+|.+..+   ...||+|+++..  ....+.+.+|+.+++.++|      |||+++++++. .
T Consensus        25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h------~~iv~~~~~~~~~   98 (298)
T 3f66_A           25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH------PNVLSLLGICLRS   98 (298)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCC------TTBCCCCEEECCS
T ss_pred             eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCC------CCEeeeeeEEEcC
Confidence            4799999999999999999997643   346899998753  3345678899999999998      99999999854 5


Q ss_pred             CCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          488 LEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       488 ~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      .+..++||||+.+ +|.++++....     .+++..++.|+.||+.||.|||++||+|+|||+
T Consensus        99 ~~~~~~v~e~~~~~~L~~~l~~~~~-----~~~~~~~~~i~~ql~~~l~~lH~~~i~H~dikp  156 (298)
T 3f66_A           99 EGSPLVVLPYMKHGDLRNFIRNETH-----NPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAA  156 (298)
T ss_dssp             SSCCEEEEECCTTCBHHHHHHCTTC-----CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSG
T ss_pred             CCceEEEEeCCCCCCHHHHHHhccc-----CCCHHHHHHHHHHHHHHHHHHHhCCccCCCCch
Confidence            5789999999987 99999986443     289999999999999999999999999999997

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=99.76  E-value=3.3e-18  Score=174.53  Aligned_cols=125  Identities=11%  Similarity=0.002  Sum_probs=95.9

Q ss_pred             CceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC----hhhHHHHHHHHHHHHHhc--ccCCCCCCCeeEeE-----
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND----KDFFDQSLDEIKLLKLVN--KNDPADEHHILRLY-----  482 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s----k~~~~~~lrEIkILk~L~--hhd~~d~pnIVrL~-----  482 (552)
                      ..|.+.+.||+|+||.||+|.+..+++.||||+++..    ....+.+.+|+.+++.|.  |      |||++++     
T Consensus        62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~h------p~iv~~~~~~~~  135 (371)
T 3q60_A           62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGES------PEEARDRRRLLL  135 (371)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------------CBCC
T ss_pred             eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccC------hhhhhhceeEEe
Confidence            3599999999999999999999999999999999874    234566778877777776  5      9988866     


Q ss_pred             --eEEEeC-----------------CEEEEEEecCCCCHHHHHHhhccCCCCcCCCHHHH------HHHHHHHHHHHHHH
Q 008813          483 --DYFYHL-----------------EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRL------QVCSTFLLTLLMLI  537 (552)
Q Consensus       483 --d~F~~~-----------------~hLyIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I------~~Ia~QIL~AL~YL  537 (552)
                        +++...                 .++||||||+.++|.++++.....     +++..+      ..++.||+.||.||
T Consensus       136 p~d~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~-----~~~~~~~~~~vk~~i~~qi~~aL~~L  210 (371)
T 3q60_A          136 PSDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAASVDLELLFSTLDFV-----YVFRGDEGILALHILTAQLIRLAANL  210 (371)
T ss_dssp             CCEEEEETTSCSSSBCSCC---CCEEEEEEEECCCSEEHHHHHHHHHHS-----CCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             eehheecCCCCCeeeccCCcccceeeeEEEEecCCCCCHHHHHHHhccc-----cchhhhhhhhhHHHHHHHHHHHHHHH
Confidence              444433                 348999999999999999976432     444444      57779999999999


Q ss_pred             HhCCCeeeeccc
Q 008813          538 FLLLVIYFILFC  549 (552)
Q Consensus       538 Hs~gIIH~~L~~  549 (552)
                      |++||||+|||+
T Consensus       211 H~~~ivHrDikp  222 (371)
T 3q60_A          211 QSKGLVHGHFTP  222 (371)
T ss_dssp             HHTTEEETTCSG
T ss_pred             HHCCCccCcCCH
Confidence            999999999997

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.75  E-value=4e-18  Score=166.18  Aligned_cols=125  Identities=14%  Similarity=0.126  Sum_probs=107.2

Q ss_pred             ceEEEEEeccCCceEEEEEEECCCC---cEEEEEEEecC--hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCC
Q 008813          415 RYYVTEYLGSAAFSKVFQAQDLHTG---VDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE  489 (552)
Q Consensus       415 RY~Ile~LGkG~FG~VykA~Dkktg---~~VAVKIIk~s--k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~  489 (552)
                      +|.+.+.||+|+||.||+|.+..++   ..||+|++...  ....+.+.+|+.+++.++|      |||+++++++...+
T Consensus        22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h------~~iv~~~~~~~~~~   95 (298)
T 3pls_A           22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNH------PNVLALIGIMLPPE   95 (298)
T ss_dssp             EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCC------TTBCCCCEEECCSS
T ss_pred             EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCC------CCeeeEEEEEecCC
Confidence            5788899999999999999975544   47999999753  3345678899999999998      99999999998766


Q ss_pred             EE-EEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          490 HL-FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       490 hL-yIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      .. ++|||++.+ +|.++++....     .+++..++.|+.||+.||.|||++||+|+|||+-
T Consensus        96 ~~~~~v~e~~~~~~L~~~~~~~~~-----~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~  153 (298)
T 3pls_A           96 GLPHVLLPYMCHGDLLQFIRSPQR-----NPTVKDLISFGLQVARGMEYLAEQKFVHRDLAAR  153 (298)
T ss_dssp             SCCEEEECCCTTCBHHHHHHCTTC-----CCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGG
T ss_pred             CCcEEEEecccCCCHHHHHhcccc-----CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcc
Confidence            54 999999865 99999986442     2899999999999999999999999999999973

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.75  E-value=3.2e-18  Score=170.41  Aligned_cols=131  Identities=16%  Similarity=0.226  Sum_probs=115.3

Q ss_pred             CCcceeeCceecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChhhHHHHHHHHHHHHH--hcccCCCCCCCee
Q 008813          402 KDLPIILNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKL--VNKNDPADEHHIL  479 (552)
Q Consensus       402 ~~y~v~~gdvi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~~~~~~lrEIkILk~--L~hhd~~d~pnIV  479 (552)
                      ..+++..+..+.++|.+.+.||+|+||.||+|.+  +++.||||++....  ...+.+|+++++.  ++|      |||+
T Consensus        30 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~--~~~~~~e~~~~~~~~l~h------~ni~   99 (342)
T 1b6c_B           30 SGLPLLVQRTIARTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSRE--ERSWFREAEIYQTVMLRH------ENIL   99 (342)
T ss_dssp             SSSCHHHHHHHHHHCEEEEEEEEETTEEEEEEEE--TTEEEEEEEECGGG--HHHHHHHHHHHHHSCCCC------TTBC
T ss_pred             CCCceeecccccccEEEEeeecCCCCcEEEEEEE--cCccEEEEEeCchh--HHHHHHHHHHHHHhhcCC------CcEE
Confidence            3566667778889999999999999999999988  48999999997543  3567889999988  566      9999


Q ss_pred             EeEeEEEeCC----EEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHH--------hCCCeeee
Q 008813          480 RLYDYFYHLE----HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIF--------LLLVIYFI  546 (552)
Q Consensus       480 rL~d~F~~~~----hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLH--------s~gIIH~~  546 (552)
                      ++++++....    .+||||||+.+ +|.++++...       +++..++.++.||+.||.|||        +++|||+|
T Consensus       100 ~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~-------~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~D  172 (342)
T 1b6c_B          100 GFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYT-------VTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRD  172 (342)
T ss_dssp             CEEEEEECCCSSCCCEEEEECCCTTCBHHHHHHHCC-------BCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSC
T ss_pred             EEEeeecccCCccceeEEEEeecCCCcHHHHHhccC-------ccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCC
Confidence            9999998775    89999999987 9999997642       899999999999999999999        89999999


Q ss_pred             ccc
Q 008813          547 LFC  549 (552)
Q Consensus       547 L~~  549 (552)
                      ||+
T Consensus       173 lkp  175 (342)
T 1b6c_B          173 LKS  175 (342)
T ss_dssp             CSG
T ss_pred             CCH
Confidence            997

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.75  E-value=1.6e-18  Score=173.35  Aligned_cols=125  Identities=18%  Similarity=0.205  Sum_probs=107.0

Q ss_pred             cCceEEEEEeccCCceEEEEEEECCCCcE----EEEEEEecC--hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEE
Q 008813          413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVD----VCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFY  486 (552)
Q Consensus       413 ~~RY~Ile~LGkG~FG~VykA~Dkktg~~----VAVKIIk~s--k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~  486 (552)
                      ..+|++++.||+|+||.||+|.+..+++.    ||+|++...  ......+.+|+.+++.++|      |||+++++++.
T Consensus        12 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h------~~iv~~~~~~~   85 (325)
T 3kex_A           12 ETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDH------AHIVRLLGLCP   85 (325)
T ss_dssp             TTTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCC------TTBCCEEEEEC
T ss_pred             HhHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCC------CCcCeEEEEEc
Confidence            47899999999999999999999888776    677776543  2223466789999999998      99999999886


Q ss_pred             eCCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          487 HLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       487 ~~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                       .+.+++||||+.+ +|.+++.....     ++++..++.|+.||+.||.|||++||||+|||+
T Consensus        86 -~~~~~~v~e~~~~~~L~~~l~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp  143 (325)
T 3kex_A           86 -GSSLQLVTQYLPLGSLLDHVRQHRG-----ALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAA  143 (325)
T ss_dssp             -BSSEEEEEECCTTCBSHHHHHSSGG-----GSCTTHHHHHHHHHHHHHHHHHHTTCCCSCCSS
T ss_pred             -CCccEEEEEeCCCCCHHHHHHHccc-----cCCHHHHHHHHHHHHHHHHHHHhCCCCCCccch
Confidence             5668999999986 99999986532     289999999999999999999999999999997

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.75  E-value=3.2e-18  Score=166.31  Aligned_cols=127  Identities=17%  Similarity=0.151  Sum_probs=109.3

Q ss_pred             eecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeC-C
Q 008813          411 VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL-E  489 (552)
Q Consensus       411 vi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~-~  489 (552)
                      +..++|++++.||+|+||.||+|.+.  ++.||||+++... ..+.+.+|+.+++.++|      |||+++++++... +
T Consensus        18 ~~~~~y~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~-~~~~~~~E~~~l~~l~h------~~iv~~~~~~~~~~~   88 (278)
T 1byg_A           18 LNMKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDA-TAQAFLAEASVMTQLRH------SNLVQLLGVIVEEKG   88 (278)
T ss_dssp             CCGGGEEEEEEEEECSSCEEEEEEET--TEEEEEEECCCCC---HHHHHTHHHHTTCCC------TTBCCEEEEECCC--
T ss_pred             CChhhceEEeEEecCCCceEEEEEEc--CCEEEEEEecchh-HHHHHHHHHHHHHhCCC------CCEeeEEEEEEcCCC
Confidence            34578999999999999999999874  7899999998653 35678899999999998      9999999997654 5


Q ss_pred             EEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          490 HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       490 hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      .+|+||||+.+ +|.+++......    ++++..++.++.||+.||.|||++||+|+||++-
T Consensus        89 ~~~lv~e~~~~~~L~~~l~~~~~~----~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~  146 (278)
T 1byg_A           89 GLYIVTEYMAKGSLVDYLRSRGRS----VLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAAR  146 (278)
T ss_dssp             CCEEEECCCTTEEHHHHHHHHHHH----HCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGG
T ss_pred             ceEEEEecCCCCCHHHHHHhcccc----cCCHHHHHHHHHHHHHHHHHHHhCCccccCCCcc
Confidence            79999999987 999999876432    2799999999999999999999999999999973

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.75  E-value=7.7e-18  Score=167.69  Aligned_cols=133  Identities=14%  Similarity=0.108  Sum_probs=110.0

Q ss_pred             eecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC--hhhHHHHHHHHH-HHHHhcccCCCCCCCeeEeEeEEEe
Q 008813          411 VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND--KDFFDQSLDEIK-LLKLVNKNDPADEHHILRLYDYFYH  487 (552)
Q Consensus       411 vi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s--k~~~~~~lrEIk-ILk~L~hhd~~d~pnIVrL~d~F~~  487 (552)
                      +..++|++++.||+|+||.||+|.+..+++.||||+++..  ......+.+|+. +++.++|      |||+++++++..
T Consensus        19 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h------~niv~~~~~~~~   92 (327)
T 3aln_A           19 FTAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDC------PYIVQFYGALFR   92 (327)
T ss_dssp             CCSCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCC------TTBCCEEEEEEC
T ss_pred             cCHHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCC------CcEeeeeeEEEe
Confidence            4457899999999999999999999999999999999864  233345666666 5555666      999999999999


Q ss_pred             CCEEEEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhC-CCeeeecccc
Q 008813          488 LEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLL-LVIYFILFCF  550 (552)
Q Consensus       488 ~~hLyIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~-gIIH~~L~~~  550 (552)
                      .+.++|||||+.++|.+++...... ....+++..++.++.|++.||.|||++ ||||+|||+-
T Consensus        93 ~~~~~lv~e~~~~~l~~~~~~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~~ivH~dlkp~  155 (327)
T 3aln_A           93 EGDCWICMELMSTSFDKFYKYVYSV-LDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPS  155 (327)
T ss_dssp             SSEEEEEECCCSEEHHHHHHHHHHT-TCCCCCHHHHHHHHHHHHHHHHHHHHHHSCCCSCCCGG
T ss_pred             CCceEEEEeecCCChHHHHHHHHhh-hcccCcHHHHHHHHHHHHHHHHHHhccCCEeECCCCHH
Confidence            9999999999999998888743211 012389999999999999999999999 9999999963

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=99.74  E-value=8.1e-18  Score=169.35  Aligned_cols=126  Identities=16%  Similarity=0.189  Sum_probs=108.0

Q ss_pred             ecCceEEEEEeccCCceEEEEEEECCCCcEE----EEEEEecC--hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEE
Q 008813          412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDV----CLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYF  485 (552)
Q Consensus       412 i~~RY~Ile~LGkG~FG~VykA~Dkktg~~V----AVKIIk~s--k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F  485 (552)
                      ...+|++++.||+|+||.||+|++..+++.+    |+|.++..  ......+.+|+.+++.++|      |||+++++++
T Consensus        13 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~h------p~iv~~~~~~   86 (327)
T 3lzb_A           13 KETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN------PHVCRLLGIC   86 (327)
T ss_dssp             CTTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCB------TTBCCCCEEE
T ss_pred             CHhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCC------CCeeEEEEEE
Confidence            3478999999999999999999998887765    66665432  2345778899999999998      9999999999


Q ss_pred             EeCCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          486 YHLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       486 ~~~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      .... .++|||++.+ +|.+++......     +++..++.|+.||+.||.|||++||||+|||+
T Consensus        87 ~~~~-~~~v~~~~~~g~L~~~l~~~~~~-----~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp  145 (327)
T 3lzb_A           87 LTST-VQLITQLMPFGCLLDYVREHKDN-----IGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAA  145 (327)
T ss_dssp             ESSS-EEEEECCCSSCBHHHHHHHTTTC-----CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCG
T ss_pred             ecCC-ceEEEEecCCCcHHHHHHhcCCC-----CCHHHHHHHHHHHHHHHHHHhhCCCcCCCCCH
Confidence            8765 7788888776 999999875432     89999999999999999999999999999997

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=99.74  E-value=1.3e-17  Score=163.97  Aligned_cols=127  Identities=17%  Similarity=0.084  Sum_probs=99.5

Q ss_pred             cCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecCh--hhHHH-HHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCC
Q 008813          413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK--DFFDQ-SLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE  489 (552)
Q Consensus       413 ~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk--~~~~~-~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~  489 (552)
                      .++|++++.||+|+||.||+|.+..+++.||||++....  ..... +..+..+++.++|      |||+++++++...+
T Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h------~~i~~~~~~~~~~~   97 (318)
T 2dyl_A           24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDC------PYIVQCFGTFITNT   97 (318)
T ss_dssp             GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTC------TTBCCEEEEEECSS
T ss_pred             hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCC------CceeeEEEEEecCC
Confidence            368999999999999999999999999999999998642  12223 3344456666777      99999999999999


Q ss_pred             EEEEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhC-CCeeeecccc
Q 008813          490 HLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLL-LVIYFILFCF  550 (552)
Q Consensus       490 hLyIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~-gIIH~~L~~~  550 (552)
                      ++||||||+++.+..++.....     ++++..++.++.||+.||.|||++ ||+|+||++-
T Consensus        98 ~~~lv~e~~~~~~~~l~~~~~~-----~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dlkp~  154 (318)
T 2dyl_A           98 DVFIAMELMGTCAEKLKKRMQG-----PIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPS  154 (318)
T ss_dssp             EEEEEECCCSEEHHHHHHHHTS-----CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCGG
T ss_pred             cEEEEEeccCCcHHHHHHHhcc-----CCCHHHHHHHHHHHHHHHHHHHhhCCEEeCCCCHH
Confidence            9999999996677666655432     289999999999999999999995 9999999873

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.74  E-value=8.9e-19  Score=174.35  Aligned_cols=130  Identities=13%  Similarity=0.126  Sum_probs=112.7

Q ss_pred             ecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC-hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCE
Q 008813          412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND-KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH  490 (552)
Q Consensus       412 i~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s-k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~h  490 (552)
                      ..++|.+.+.||+|+||.||+|.+. +++.||||++... ....+.+.+|+.+++.++|      |||+++++++...++
T Consensus        37 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h------~~iv~~~~~~~~~~~  109 (321)
T 2qkw_B           37 ATNNFDHKFLIGHGVFGKVYKGVLR-DGAKVALKRRTPESSQGIEEFETEIETLSFCRH------PHLVSLIGFCDERNE  109 (321)
T ss_dssp             CCCCCSCCCCSCBCSSSEEEEEECT-TCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCC------TTBCCEEEECCCTTC
T ss_pred             HHhccCccceeecCCCeeEEEEEEC-CCCEEEEEEecccChHHHHHHHHHHHHHHhCCC------CCEeeEEEEEcCCCe
Confidence            4578999999999999999999964 6889999998754 2345678899999999998      999999999999999


Q ss_pred             EEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          491 LFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       491 LyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      +++||||+.+ +|.+++......  ...+++..++.|+.||+.||.|||++||||+|||+-
T Consensus       110 ~~lv~e~~~~~~L~~~l~~~~~~--~~~~~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~  168 (321)
T 2qkw_B          110 MILIYKYMENGNLKRHLYGSDLP--TMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSI  168 (321)
T ss_dssp             CEEEEECCTTCBTGGGSSSSCCC--SCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCST
T ss_pred             EEEEEEcCCCCcHHHHHhccCCC--ccccCHHHHHHHHHHHHHHHHHhcCCCeecCCCCHH
Confidence            9999999986 999988754321  123899999999999999999999999999999973

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.74  E-value=8.5e-19  Score=174.18  Aligned_cols=131  Identities=16%  Similarity=0.157  Sum_probs=112.3

Q ss_pred             ceecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChh--hHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEe
Q 008813          410 TVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD--FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH  487 (552)
Q Consensus       410 dvi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~--~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~  487 (552)
                      .+..++|++.+.||+|+||.||+|.+ .+++.||||+++....  ....+.+|+++++.++|      |||+++++++..
T Consensus        26 ~~~~~~y~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h------~~iv~~~~~~~~   98 (326)
T 3uim_A           26 QVASDNFSNKNILGRGGFGKVYKGRL-ADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVH------RNLLRLRGFCMT   98 (326)
T ss_dssp             HTTTTSSCSTTEEECCSSSEEEEECC-SSSCCEEEEECCC-----CCCHHHHHHHGGGTCCC------TTBCCCCEEECC
T ss_pred             HHHhhccccceeEecCCCcEEEEEEe-cCCCEEEEEEeccccCchHHHHHHHHHHHHHhccC------CCccceEEEEec
Confidence            34567899999999999999999975 4688999999976422  22367899999999998      999999999999


Q ss_pred             CCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhC---CCeeeeccc
Q 008813          488 LEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLL---LVIYFILFC  549 (552)
Q Consensus       488 ~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~---gIIH~~L~~  549 (552)
                      .++.+|||||+.+ +|.++++......  .++++..++.|+.||+.||.|||++   ||||+|||+
T Consensus        99 ~~~~~lv~e~~~~~~L~~~l~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp  162 (326)
T 3uim_A           99 PTERLLVYPYMANGSVASCLRERPESQ--PPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKA  162 (326)
T ss_dssp             SSCCEEEEECCTTCBHHHHHHCCSTTC--CCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSG
T ss_pred             CCceEEEEEeccCCCHHHHHHhccccC--CCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCch
Confidence            9999999999987 9999998754322  3489999999999999999999999   999999997

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.73  E-value=1e-17  Score=162.73  Aligned_cols=127  Identities=21%  Similarity=0.231  Sum_probs=102.5

Q ss_pred             ecCceEEEEEeccCCceEEEEEEECC-CC--cEEEEEEEecC----hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeE
Q 008813          412 IAGRYYVTEYLGSAAFSKVFQAQDLH-TG--VDVCLKIIKND----KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDY  484 (552)
Q Consensus       412 i~~RY~Ile~LGkG~FG~VykA~Dkk-tg--~~VAVKIIk~s----k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~  484 (552)
                      ..++|++++.||+|+||.||+|.+.. ++  ..||||+++..    ....+.+.+|+++++.++|      |||++++++
T Consensus        16 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h------~~i~~~~~~   89 (291)
T 1u46_A           16 GEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDH------RNLIRLYGV   89 (291)
T ss_dssp             CGGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCC------TTBCCEEEE
T ss_pred             chhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCC------CCcccEEEE
Confidence            34789999999999999999998643 33  36899998753    2345678899999999998      999999999


Q ss_pred             EEeCCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          485 FYHLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       485 F~~~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      +.... +++|||++.+ +|.+++......     +++..++.++.||+.||.|||++||+|+|||+-
T Consensus        90 ~~~~~-~~~v~e~~~~~~L~~~l~~~~~~-----~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~  150 (291)
T 1u46_A           90 VLTPP-MKMVTELAPLGSLLDRLRKHQGH-----FLLGTLSRYAVQVAEGMGYLESKRFIHRDLAAR  150 (291)
T ss_dssp             ECSSS-CEEEEECCTTCBHHHHHHHHGGG-----SCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGG
T ss_pred             EccCC-ceeeEecccCCCHHHHHHhccCC-----cCHHHHHHHHHHHHHHHHHHHhCCcccCCCchh
Confidence            98765 8999999986 999999876432     899999999999999999999999999999973

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.73  E-value=1.3e-17  Score=164.05  Aligned_cols=124  Identities=11%  Similarity=0.059  Sum_probs=107.4

Q ss_pred             eEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC-----hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCE
Q 008813          416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND-----KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH  490 (552)
Q Consensus       416 Y~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s-----k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~h  490 (552)
                      |...+.||+|+||.||+|.+  +++.||||++...     ....+.+.+|+.+++.++|      |||+++++++...+.
T Consensus        33 ~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h------~~i~~~~~~~~~~~~  104 (307)
T 2nru_A           33 SVGGNKMGEGGFGVVYKGYV--NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQH------ENLVELLGFSSDGDD  104 (307)
T ss_dssp             TTTCCEEEECSSEEEEEEES--SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCC------TTBCCEEEEECSSSS
T ss_pred             cccCCccccCCCeEEEEEEE--CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCC------CCeEEEEEEEecCCc
Confidence            33457899999999999986  5789999999753     2345678899999999998      999999999999999


Q ss_pred             EEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          491 LFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       491 LyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      ++|||||+.+ +|.+++......   .++++..++.|+.||+.||.|||++||+|+|||+-
T Consensus       105 ~~lv~e~~~~~~L~~~l~~~~~~---~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~  162 (307)
T 2nru_A          105 LCLVYVYMPNGSLLDRLSCLDGT---PPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSA  162 (307)
T ss_dssp             CEEEEECCTTCBHHHHHHTGGGC---CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGG
T ss_pred             eEEEEEecCCCcHHHHHHhccCC---CCCCHHHHHHHHHHHHHHHHHHhcCCeecCCCCHH
Confidence            9999999976 999999865432   23899999999999999999999999999999973

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.72  E-value=1.8e-17  Score=173.98  Aligned_cols=131  Identities=21%  Similarity=0.123  Sum_probs=104.7

Q ss_pred             eecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChhhHHHHHHHHHHHHHh-cccCCCCCCCeeEeEeEEEeCC
Q 008813          411 VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLV-NKNDPADEHHILRLYDYFYHLE  489 (552)
Q Consensus       411 vi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~~~~~~lrEIkILk~L-~hhd~~d~pnIVrL~d~F~~~~  489 (552)
                      .+.++|.+.+.||+|+||+||.+ ...+++.||||++...  ..+.+.+|+++|+.+ +|      ||||++++++...+
T Consensus        12 ~l~~~~~~~~~LG~G~~g~V~~~-~~~~g~~vAvK~~~~~--~~~~~~~E~~~l~~l~~H------pnIv~~~~~~~~~~   82 (434)
T 2rio_A           12 SLKNLVVSEKILGYGSSGTVVFQ-GSFQGRPVAVKRMLID--FCDIALMEIKLLTESDDH------PNVIRYYCSETTDR   82 (434)
T ss_dssp             SCSSCEEEEEEEEECSTTCEEEE-EESSSSEEEEEEEEGG--GHHHHHHHHHHHHHHTTS------TTBCCEEEEEECSS
T ss_pred             hhhheeeccCeEeeCCCeEEEEE-EEECCeEEEEEEEcHH--HHHHHHHHHHHHHhccCC------CCcCeEEEEEecCC
Confidence            45567888899999999999876 4457899999999754  346678999999987 55      99999999999999


Q ss_pred             EEEEEEecCCCCHHHHHHhhccCCCC-cCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          490 HLFIVCELLRANLYEFQKFNQESGGE-AYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       490 hLyIVmEll~GsL~d~Lk~~~~~g~~-~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      ++|||||||+++|.++++........ ...++..++.|+.||+.||.|||++||||+|||+-
T Consensus        83 ~~~lv~E~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDLkp~  144 (434)
T 2rio_A           83 FLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQ  144 (434)
T ss_dssp             EEEEEECCCSEEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTTEECCCCSGG
T ss_pred             eEEEEEecCCCCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCCccccCCChH
Confidence            99999999999999999865432100 00133456789999999999999999999999973

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=99.72  E-value=1.8e-17  Score=165.06  Aligned_cols=122  Identities=11%  Similarity=0.091  Sum_probs=100.2

Q ss_pred             eecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChhhHHHHHHHHHH--HHHhcccCCCCCCCeeEeEeEEEe-
Q 008813          411 VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKL--LKLVNKNDPADEHHILRLYDYFYH-  487 (552)
Q Consensus       411 vi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~~~~~~lrEIkI--Lk~L~hhd~~d~pnIVrL~d~F~~-  487 (552)
                      +..++|++++.||+|+||.||+|.+  +++.||||++.....  .....|..+  +..++|      +||+++++.+.. 
T Consensus        10 ~~~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~--~~~~~e~~~~~~~~~~h------~~i~~~~~~~~~~   79 (336)
T 3g2f_A           10 LDLDNLKLLELIGRGRYGAVYKGSL--DERPVAVKVFSFANR--QNFINEKNIYRVPLMEH------DNIARFIVGDERV   79 (336)
T ss_dssp             CCTTSEEEEEEEEECSSEEEEEEEE--TTEEEEEEEEEGGGH--HHHHHHHHHHTSTTCCC------TTBCCEEEEEEEE
T ss_pred             cChHHhheeeecccCCCeEEEEEEE--CCeEEEEEEeeccch--hhHHHHHHHHHHHhccC------cchhhheeccccc
Confidence            3457899999999999999999976  689999999986533  334444444  444676      999999986542 


Q ss_pred             ----CCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhC---------CCeeeeccc
Q 008813          488 ----LEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLL---------LVIYFILFC  549 (552)
Q Consensus       488 ----~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~---------gIIH~~L~~  549 (552)
                          ...+||||||+.+ +|.++++...       +++..++.|+.||+.||.|||++         ||||+|||+
T Consensus        80 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~-------~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp  148 (336)
T 3g2f_A           80 TADGRMEYLLVMEYYPNGSLXKYLSLHT-------SDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNS  148 (336)
T ss_dssp             CTTSCEEEEEEECCCTTCBHHHHHHHCC-------BCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSG
T ss_pred             ccCCCceEEEEEecCCCCcHHHHHhhcc-------cchhHHHHHHHHHHHHHHHHHhhhccccccccceeeccccc
Confidence                2478999999976 9999997654       68899999999999999999999         999999997

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.72  E-value=5.5e-17  Score=179.65  Aligned_cols=121  Identities=17%  Similarity=0.154  Sum_probs=104.6

Q ss_pred             eEEE-EEeccCCceEEEEEEE--CCCCcEEEEEEEecC---hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCC
Q 008813          416 YYVT-EYLGSAAFSKVFQAQD--LHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE  489 (552)
Q Consensus       416 Y~Il-e~LGkG~FG~VykA~D--kktg~~VAVKIIk~s---k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~  489 (552)
                      +.+. +.||+|+||.||+|.+  ..+++.||||+++..   ....+.+.+|+++|+.|+|      ||||++++++. .+
T Consensus       370 ~~l~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~h------pnIv~l~~~~~-~~  442 (635)
T 4fl3_A          370 LTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDN------PYIVRMIGICE-AE  442 (635)
T ss_dssp             EEEEEEEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCC------TTBCCEEEEEE-SS
T ss_pred             ccccCCEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCC------CCEeeEEEEEe-cC
Confidence            4443 4799999999999954  466789999999864   2345789999999999998      99999999986 45


Q ss_pred             EEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          490 HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       490 hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      .++|||||+.+ +|.++++....      +++..++.|+.||+.||.|||++||||+|||+
T Consensus       443 ~~~lv~E~~~~g~L~~~l~~~~~------l~~~~~~~i~~qi~~~L~yLH~~~iiHrDLkp  497 (635)
T 4fl3_A          443 SWMLVMEMAELGPLNKYLQQNRH------VKDKNIIELVHQVSMGMKYLEESNFVHRDLAA  497 (635)
T ss_dssp             SEEEEEECCTTEEHHHHHHHCTT------CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSG
T ss_pred             CEEEEEEccCCCCHHHHHhhCCC------CCHHHHHHHHHHHHHHHHHHHHCCEeCCCCCh
Confidence            68999999987 99999986543      89999999999999999999999999999997

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.72  E-value=2.3e-17  Score=164.11  Aligned_cols=124  Identities=21%  Similarity=0.180  Sum_probs=107.0

Q ss_pred             cCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEEE
Q 008813          413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLF  492 (552)
Q Consensus       413 ~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hLy  492 (552)
                      .++|++.+.||+|+||.||+|.+.  ++.||||++.... ..+.+.+|+++|++++|      |||+++++++.  +.+|
T Consensus         7 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~-~~~~~~~E~~~l~~l~h------p~iv~~~~~~~--~~~~   75 (307)
T 2eva_A            7 YKEIEVEEVVGRGAFGVVCKAKWR--AKDVAIKQIESES-ERKAFIVELRQLSRVNH------PNIVKLYGACL--NPVC   75 (307)
T ss_dssp             GGGEEEEEEEECCSSSEEEEEEET--TEEEEEEECSSTT-HHHHHHHHHHHHHHCCC------TTBCCEEEBCT--TTTE
T ss_pred             HhHeeeeeEeecCCCceEEEEEEC--CeeEEEEEecChh-HHHHHHHHHHHHhcCCC------CCcCeEEEEEc--CCcE
Confidence            368999999999999999999874  7889999997543 35678899999999998      99999999877  4489


Q ss_pred             EEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHh---CCCeeeecccc
Q 008813          493 IVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFL---LLVIYFILFCF  550 (552)
Q Consensus       493 IVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs---~gIIH~~L~~~  550 (552)
                      |||||+.+ +|.+++......   ..+++..+..++.||+.||.|||+   +||||+|||+-
T Consensus        76 lv~e~~~~~~L~~~l~~~~~~---~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~  134 (307)
T 2eva_A           76 LVMEYAEGGSLYNVLHGAEPL---PYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPP  134 (307)
T ss_dssp             EEEECCTTCBHHHHHHCSSSE---ECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGG
T ss_pred             EEEEcCCCCCHHHHHhccCCC---CccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChh
Confidence            99999976 999999865421   127899999999999999999999   89999999973

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.71  E-value=3.8e-17  Score=179.92  Aligned_cols=124  Identities=18%  Similarity=0.194  Sum_probs=107.0

Q ss_pred             CceEEEE-EeccCCceEEEEEEEC--CCCcEEEEEEEecC--hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeC
Q 008813          414 GRYYVTE-YLGSAAFSKVFQAQDL--HTGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL  488 (552)
Q Consensus       414 ~RY~Ile-~LGkG~FG~VykA~Dk--ktg~~VAVKIIk~s--k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~  488 (552)
                      .++.+.+ .||+|+||.||+|.++  .++..||||+++..  ....+.+.+|+++|+.++|      ||||++++++.. 
T Consensus       335 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~h------pniv~l~~~~~~-  407 (613)
T 2ozo_A          335 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDN------PYIVRLIGVCQA-  407 (613)
T ss_dssp             TSEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCC------TTBCCEEEEEES-
T ss_pred             cceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCC------CCEeeEEEEecc-
Confidence            4566666 8999999999999875  35677999999864  3345788999999999998      999999999876 


Q ss_pred             CEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          489 EHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       489 ~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      +.+||||||+.+ +|.+++.....     .+++..++.|+.||+.||.|||+++|||+|||+
T Consensus       408 ~~~~lv~E~~~~g~L~~~l~~~~~-----~l~~~~~~~i~~qi~~~L~~LH~~~iiHrDlkp  464 (613)
T 2ozo_A          408 EALMLVMEMAGGGPLHKFLVGKRE-----EIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAA  464 (613)
T ss_dssp             SSEEEEEECCTTCBHHHHHTTCTT-----TSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSG
T ss_pred             CCeEEEEEeCCCCcHHHHHhhccC-----CCCHHHHHHHHHHHHHHHHHHHHCCEEcCcCCH
Confidence            569999999987 99999975432     289999999999999999999999999999997

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.71  E-value=2.4e-18  Score=169.68  Aligned_cols=129  Identities=12%  Similarity=0.157  Sum_probs=111.0

Q ss_pred             eCceecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC---hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeE
Q 008813          408 LNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDY  484 (552)
Q Consensus       408 ~gdvi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s---k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~  484 (552)
                      ...+..++|++.+.||+|+||.||+|.+..   .+|+|+++..   ....+.+.+|+.+++.++|      +||++++++
T Consensus        27 ~~~i~~~~~~~~~~lg~G~~g~V~~~~~~~---~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h------~~iv~~~~~   97 (319)
T 2y4i_B           27 EWDIPFEQLEIGELIGKGRFGQVYHGRWHG---EVAIRLIDIERDNEDQLKAFKREVMAYRQTRH------ENVVLFMGA   97 (319)
T ss_dssp             GSSSCCSCEECCCBCCCSSSSEEEEEEESS---SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCC------TTBCCCCEE
T ss_pred             cccCCHHHeEEeeEeccCCceEEEEEEEcC---eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCC------CCEeEEEEE
Confidence            334556789999999999999999999864   4999998753   2233456789999999998      999999999


Q ss_pred             EEeCCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          485 FYHLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       485 F~~~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      +...++++|||||+.+ +|.++++....     .+++..++.|+.||+.||.|||++||+|+|||+-
T Consensus        98 ~~~~~~~~iv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~  159 (319)
T 2y4i_B           98 CMSPPHLAIITSLCKGRTLYSVVRDAKI-----VLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSK  159 (319)
T ss_dssp             EECSSCEEEECBCCCSEEHHHHTTSSCC-----CCCSHHHHHHHHHHHHHHHHHHHTTCCCCCCCST
T ss_pred             EecCCceEEEeecccCCcHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHhCCccccCCChh
Confidence            9999999999999986 99999976542     2899999999999999999999999999999973

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.71  E-value=1.4e-17  Score=175.71  Aligned_cols=123  Identities=17%  Similarity=0.126  Sum_probs=104.6

Q ss_pred             CceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEEEE
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFI  493 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hLyI  493 (552)
                      .+|.+.+.||+|+||.|+. ....+++.||||++....  ...+.+|+++|+.+..|     ||||++++++....++||
T Consensus        24 ~~y~~~~~LG~G~~G~V~~-~~~~~~~~vAvK~~~~~~--~~~~~~E~~~l~~l~~H-----pnIv~l~~~~~~~~~~~l   95 (432)
T 3p23_A           24 ISFCPKDVLGHGAEGTIVY-RGMFDNRDVAVKRILPEC--FSFADREVQLLRESDEH-----PNVIRYFCTEKDRQFQYI   95 (432)
T ss_dssp             EEEEEEEEEEECGGGCEEE-EEESSSSEEEEEEECTTT--EEECHHHHHHHHHSCCC-----TTBCCEEEEEEETTEEEE
T ss_pred             EEEecCCeeecCcCEEEEE-EEEeCCeEEEEEEECHHH--HHHHHHHHHHHHhccCC-----CCcCeEEEEEecCCEEEE
Confidence            4799999999999999764 344578999999997532  23467899999999433     999999999999999999


Q ss_pred             EEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          494 VCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       494 VmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      |||||.++|.+++......     +++..++.|+.||+.||.|||++||||+|||+
T Consensus        96 v~E~~~g~L~~~l~~~~~~-----~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp  146 (432)
T 3p23_A           96 AIELCAATLQEYVEQKDFA-----HLGLEPITLLQQTTSGLAHLHSLNIVHRDLKP  146 (432)
T ss_dssp             EEECCSEEHHHHHHSSSCC-----CCSSCHHHHHHHHHHHHHHHHHTTCCCCCCST
T ss_pred             EEECCCCCHHHHHHhcCCC-----ccchhHHHHHHHHHHHHHHHHHCcCEeCCCCH
Confidence            9999999999999876532     45566788999999999999999999999997

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.70  E-value=2e-17  Score=170.87  Aligned_cols=125  Identities=14%  Similarity=0.096  Sum_probs=107.1

Q ss_pred             ceEEEEEeccCCceEEEEEEECCC---CcEEEEEEEecC--hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEE-eC
Q 008813          415 RYYVTEYLGSAAFSKVFQAQDLHT---GVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFY-HL  488 (552)
Q Consensus       415 RY~Ile~LGkG~FG~VykA~Dkkt---g~~VAVKIIk~s--k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~-~~  488 (552)
                      +|.+.+.||+|+||.||+|.+..+   +..||||+++..  ....+.+.+|+.+++.++|      |||+++++++. ..
T Consensus        90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~h------pnIv~~~~~~~~~~  163 (373)
T 3c1x_A           90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH------PNVLSLLGICLRSE  163 (373)
T ss_dssp             EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCC------TTBCCCCEEECCCS
T ss_pred             eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCC------CCcceEEEEEEcCC
Confidence            588999999999999999987543   346899998753  3345778999999999998      99999999865 45


Q ss_pred             CEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          489 EHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       489 ~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      +..||||||+.+ +|.++++....     .+++..++.|+.||+.||.|||++||||+|||+-
T Consensus       164 ~~~~lv~e~~~~g~L~~~l~~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~  221 (373)
T 3c1x_A          164 GSPLVVLPYMKHGDLRNFIRNETH-----NPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAAR  221 (373)
T ss_dssp             SCCEEEEECCTTCBHHHHHHCTTC-----CCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGG
T ss_pred             CCeEEEEECCCCCCHHHHHhhccc-----CCCHHHHHHHHHHHHHHHHHHHHCCEecCccchh
Confidence            688999999987 99999986543     2889999999999999999999999999999973

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.69  E-value=1.4e-16  Score=176.92  Aligned_cols=127  Identities=19%  Similarity=0.219  Sum_probs=110.3

Q ss_pred             eecCceEEEEEeccCCceEEEEEEECCC---CcEEEEEEEecC--hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEE
Q 008813          411 VIAGRYYVTEYLGSAAFSKVFQAQDLHT---GVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYF  485 (552)
Q Consensus       411 vi~~RY~Ile~LGkG~FG~VykA~Dkkt---g~~VAVKIIk~s--k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F  485 (552)
                      +..++|++.+.||+|+||.||+|.+..+   +..||||+++..  ....+.+.+|+.+|+.++|      |||+++++++
T Consensus       387 i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~H------pnIv~l~~~~  460 (656)
T 2j0j_A          387 IQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDH------PHIVKLIGVI  460 (656)
T ss_dssp             CCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCC------TTBCCEEEEE
T ss_pred             cccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCC------CCCCeEEEEE
Confidence            4457899999999999999999998643   467999998753  3345778999999999998      9999999998


Q ss_pred             EeCCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          486 YHLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       486 ~~~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      . .+.+||||||+.+ +|.++++....     .+++..++.|+.||+.||.|||++||||+|||+
T Consensus       461 ~-~~~~~lv~E~~~~g~L~~~l~~~~~-----~l~~~~~~~i~~qi~~aL~~LH~~givHrDikp  519 (656)
T 2j0j_A          461 T-ENPVWIIMELCTLGELRSFLQVRKF-----SLDLASLILYAYQLSTALAYLESKRFVHRDIAA  519 (656)
T ss_dssp             C-SSSCEEEEECCTTCBHHHHHHHTTT-----TCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSG
T ss_pred             e-cCceEEEEEcCCCCcHHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHhCCccccccch
Confidence            4 5678999999986 99999986543     289999999999999999999999999999997

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.66  E-value=2e-17  Score=185.50  Aligned_cols=130  Identities=15%  Similarity=0.150  Sum_probs=110.1

Q ss_pred             eecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC--hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEe-
Q 008813          411 VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH-  487 (552)
Q Consensus       411 vi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s--k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~-  487 (552)
                      ...++|++.+.||+|+||.||+|.+..+++.||||+++..  ....+.+.+|+++|+.++|      |||+++++++.. 
T Consensus        11 ~~~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~H------pnIV~l~~v~~~~   84 (676)
T 3qa8_A           11 QTCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNH------PNVVSAREVPDGL   84 (676)
T ss_dssp             ------CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCB------TTBCCEEECCTTT
T ss_pred             CCCCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCC------CCCCceeeeeccc
Confidence            3458999999999999999999999999999999998753  3345678899999999998      999999998765 


Q ss_pred             -----CCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          488 -----LEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       488 -----~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                           .+..||||||+.+ +|.+++......   .++++..++.|+.||+.||.|||++||||+||++
T Consensus        85 ~~~~~~~~~~LVmEy~~ggsL~~~L~~~~~~---~~lse~~i~~I~~QLl~aL~yLHs~gIVHrDLKP  149 (676)
T 3qa8_A           85 QKLAPNDLPLLAMEYCEGGDLRKYLNQFENC---CGLKEGPIRTLLSDISSALRYLHENRIIHRDLKP  149 (676)
T ss_dssp             CCCCTTSSCCCEEECCSSCBHHHHHHSSSCT---TCCCSSHHHHHHHHHHHHHHHHHHTTBCCCCCCS
T ss_pred             ccccCCCeEEEEEEeCCCCCHHHHHHhcccC---CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCH
Confidence                 6788999999966 999999875432   1389999999999999999999999999999997

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.63  E-value=5e-16  Score=170.15  Aligned_cols=119  Identities=14%  Similarity=-0.072  Sum_probs=94.0

Q ss_pred             EEEEEeccCCceEEEEEEECCCCcEEEEEEEecC-----------hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEE
Q 008813          417 YVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND-----------KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYF  485 (552)
Q Consensus       417 ~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s-----------k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F  485 (552)
                      .....++.|+.|.+..++..-.|+.||+|++.+.           ....+.+.+|+++|+++.+|     +||+++++++
T Consensus       237 ~w~~~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~-----~~i~~~~~~~  311 (569)
T 4azs_A          237 HWQNQPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAG-----FDAPAVLAHG  311 (569)
T ss_dssp             EEECC-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTT-----CCCCCEEEEE
T ss_pred             hhhhccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCC-----CCeeEEEEEE
Confidence            3445678888888888877778999999999763           12345789999999999765     9999999999


Q ss_pred             EeCCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          486 YHLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       486 ~~~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      .+.+.+||||||+.| +|.++|+....      +++.   .|++||+.||.|||++||||+|||+
T Consensus       312 ed~~~~yLVMEyv~G~~L~d~i~~~~~------l~~~---~I~~QIl~AL~ylH~~GIIHRDIKP  367 (569)
T 4azs_A          312 ENAQSGWLVMEKLPGRLLSDMLAAGEE------IDRE---KILGSLLRSLAALEKQGFWHDDVRP  367 (569)
T ss_dssp             ECSSEEEEEEECCCSEEHHHHHHTTCC------CCHH---HHHHHHHHHHHHHHHTTCEESCCCG
T ss_pred             EECCEEEEEEecCCCCcHHHHHHhCCC------CCHH---HHHHHHHHHHHHHHHCCceeccCch
Confidence            999999999999998 99999987643      6654   4789999999999999999999997

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=99.56  E-value=2.4e-15  Score=156.91  Aligned_cols=135  Identities=13%  Similarity=0.084  Sum_probs=96.4

Q ss_pred             ceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC----hhhHHHHHHHHHHHHHhcccCCC----------------C
Q 008813          415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND----KDFFDQSLDEIKLLKLVNKNDPA----------------D  474 (552)
Q Consensus       415 RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s----k~~~~~~lrEIkILk~L~hhd~~----------------d  474 (552)
                      .|.+.+.||+|+||.||+|.+..+++.||||+++..    ....+.+.+|+.+++.++|....                .
T Consensus        79 ~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  158 (413)
T 3dzo_A           79 TLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVK  158 (413)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEEE
T ss_pred             eEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhcc
Confidence            488899999999999999999999999999999843    22346788999999988762100                0


Q ss_pred             CCCeeEeEeEEEe-----CCEEEEEEecCCCCHHHHHHhhcc-CCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecc
Q 008813          475 EHHILRLYDYFYH-----LEHLFIVCELLRANLYEFQKFNQE-SGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILF  548 (552)
Q Consensus       475 ~pnIVrL~d~F~~-----~~hLyIVmEll~GsL~d~Lk~~~~-~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~  548 (552)
                      .++...+..++..     ...++++|+++.++|.++++.... .....++++..+..|+.||+.||.|||++||||+|||
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~iiHrDiK  238 (413)
T 3dzo_A          159 DPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLR  238 (413)
T ss_dssp             CCC---------------CCSEEEEEECCSEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEECSCCC
T ss_pred             cCCCCccccccCCCccccccceEEEeehhcCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcc
Confidence            0111111111221     235799999999999999863210 0011237888999999999999999999999999999


Q ss_pred             c
Q 008813          549 C  549 (552)
Q Consensus       549 ~  549 (552)
                      +
T Consensus       239 p  239 (413)
T 3dzo_A          239 P  239 (413)
T ss_dssp             G
T ss_pred             c
Confidence            7

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=99.55  E-value=7.6e-15  Score=146.64  Aligned_cols=113  Identities=15%  Similarity=0.156  Sum_probs=90.3

Q ss_pred             CceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecCh-------------------hhHHHHHHHHHHHHHhcccCCCC
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK-------------------DFFDQSLDEIKLLKLVNKNDPAD  474 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk-------------------~~~~~~lrEIkILk~L~hhd~~d  474 (552)
                      ..|.+.+.||+|+||.||+|.+ .+++.||||+++...                   .....+.+|+.+|+.++|     
T Consensus        90 ~~~~~~~~iG~G~~g~Vy~~~~-~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~~-----  163 (282)
T 1zar_A           90 KVDAIGKLMGEGKESAVFNCYS-EKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQG-----  163 (282)
T ss_dssp             SCSEEEEEEEECSSEEEEEEEE-TTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTT-----
T ss_pred             eEEEecCEeccCCCceEEEEEe-CCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhccC-----
Confidence            3467789999999999999999 889999999997532                   124568899999999983     


Q ss_pred             CCCeeEeEeEEEeCCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          475 EHHILRLYDYFYHLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       475 ~pnIVrL~d~F~~~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                       .+++..++    .+++||||||+.+ +|.+ +.          +  ..+..++.||+.||.|||++||||+|||+.
T Consensus       164 -~~v~~~~~----~~~~~lvmE~~~g~~L~~-l~----------~--~~~~~i~~qi~~~l~~lH~~giiHrDlkp~  222 (282)
T 1zar_A          164 -LAVPKVYA----WEGNAVLMELIDAKELYR-VR----------V--ENPDEVLDMILEEVAKFYHRGIVHGDLSQY  222 (282)
T ss_dssp             -SSSCCEEE----EETTEEEEECCCCEEGGG-CC----------C--SCHHHHHHHHHHHHHHHHHTTEECSCCSTT
T ss_pred             -CCcCeEEe----ccceEEEEEecCCCcHHH-cc----------h--hhHHHHHHHHHHHHHHHHHCCCEeCCCCHH
Confidence             56666443    2456999999987 8987 32          1  134579999999999999999999999985

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=99.53  E-value=1.2e-14  Score=142.62  Aligned_cols=116  Identities=13%  Similarity=0.151  Sum_probs=90.2

Q ss_pred             eEEEEEeccCCceEEEEEEECCCCcE--EEEEEEecChh-------------------------hHHHHHHHHHHHHHhc
Q 008813          416 YYVTEYLGSAAFSKVFQAQDLHTGVD--VCLKIIKNDKD-------------------------FFDQSLDEIKLLKLVN  468 (552)
Q Consensus       416 Y~Ile~LGkG~FG~VykA~Dkktg~~--VAVKIIk~sk~-------------------------~~~~~lrEIkILk~L~  468 (552)
                      |.+.+.||+|+||.||+|.+..+|+.  ||||+++....                         ....+.+|+.+|+.|.
T Consensus        49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~  128 (258)
T 1zth_A           49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK  128 (258)
T ss_dssp             EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence            78899999999999999999778888  99999765311                         0135789999999999


Q ss_pred             ccCCCCCCC--eeEeEeEEEeCCEEEEEEecCCC------CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHH-h
Q 008813          469 KNDPADEHH--ILRLYDYFYHLEHLFIVCELLRA------NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIF-L  539 (552)
Q Consensus       469 hhd~~d~pn--IVrL~d~F~~~~hLyIVmEll~G------sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLH-s  539 (552)
                      |      ++  ++.++..    +..+|||||+++      .|.+++..         +++..+..++.||+.||.||| +
T Consensus       129 ~------~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~---------~~~~~~~~i~~qi~~~l~~lH~~  189 (258)
T 1zth_A          129 E------AGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE---------LKELDVEGIFNDVVENVKRLYQE  189 (258)
T ss_dssp             H------TTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG---------GGGSCHHHHHHHHHHHHHHHHHT
T ss_pred             h------CCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc---------cChHHHHHHHHHHHHHHHHHHHH
Confidence            8      43  3444432    356899999953      67665332         234567889999999999999 9


Q ss_pred             CCCeeeecccc
Q 008813          540 LLVIYFILFCF  550 (552)
Q Consensus       540 ~gIIH~~L~~~  550 (552)
                      +||||+|||+.
T Consensus       190 ~givHrDlkp~  200 (258)
T 1zth_A          190 AELVHADLSEY  200 (258)
T ss_dssp             SCEECSSCSTT
T ss_pred             CCEEeCCCCHH
Confidence            99999999974

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.50  E-value=2.2e-14  Score=156.04  Aligned_cols=111  Identities=14%  Similarity=0.012  Sum_probs=84.7

Q ss_pred             EEEEEeccCCceEEEEEEECCCCcEEEEEEEecCh---------hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEe
Q 008813          417 YVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK---------DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH  487 (552)
Q Consensus       417 ~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk---------~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~  487 (552)
                      ...+.||+|+||.||+|.  ..++.+++|++....         ...+.+.+|+++|++++|      |||+++..++..
T Consensus       339 ~~~~~LG~G~fg~Vy~~~--~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h------~nIv~~~~~~~~  410 (540)
T 3en9_A          339 IPEHLIGKGAEADIKRDS--YLDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKD------FGIPAPYIFDVD  410 (540)
T ss_dssp             ---------CCEEEEEEE--CSSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGG------GTCCCCCEEEEE
T ss_pred             CCCCEEeeCCCEEEEEEE--ECCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCC------CCcCceEEEEEe
Confidence            446789999999999994  357889999875421         123457899999999998      999966666667


Q ss_pred             CCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          488 LEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       488 ~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      .++.||||||+.+ +|.++++.              ++.|+.||+.||.|||++||||+|||+
T Consensus       411 ~~~~~lVmE~~~ggsL~~~l~~--------------~~~i~~qi~~aL~~LH~~gIiHrDiKp  459 (540)
T 3en9_A          411 LDNKRIMMSYINGKLAKDVIED--------------NLDIAYKIGEIVGKLHKNDVIHNDLTT  459 (540)
T ss_dssp             TTTTEEEEECCCSEEHHHHSTT--------------CTHHHHHHHHHHHHHHHTTEECTTCCT
T ss_pred             CCccEEEEECCCCCCHHHHHHH--------------HHHHHHHHHHHHHHHHHCcCccCCCCH
Confidence            7788999999986 99998764              357999999999999999999999997

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=99.35  E-value=1.5e-12  Score=137.81  Aligned_cols=112  Identities=18%  Similarity=0.135  Sum_probs=82.9

Q ss_pred             eEEEEEeccCCceEEEEEEECCCCcEEEEEEEecCh----------h-------------hHHHHHHHHHHHHHhcccCC
Q 008813          416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----------D-------------FFDQSLDEIKLLKLVNKNDP  472 (552)
Q Consensus       416 Y~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk----------~-------------~~~~~lrEIkILk~L~hhd~  472 (552)
                      |.+...||+|+||.||+|.+. +|+.||||+++...          .             ..-.+.+|...|.+|.+   
T Consensus        97 Y~I~~~IG~Gk~a~VY~a~d~-~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~---  172 (397)
T 4gyi_A           97 YSVGSRIGVGKESDIMIVADE-KGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYE---  172 (397)
T ss_dssp             SEEEEEEEECSSEEEEEEECT-TCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHH---
T ss_pred             EEecCEeeeCCceEEEEEECC-CCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHh---
Confidence            999999999999999999985 68999999986420          0             01123568888888876   


Q ss_pred             CCCCCe--eEeEeEEEeCCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          473 ADEHHI--LRLYDYFYHLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       473 ~d~pnI--VrL~d~F~~~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                         .+|  +..++.   .. .+|||||++| .|.++.            ....+..++.||+.+|.|||++||||+|||+
T Consensus       173 ---~gv~vp~p~~~---~~-~~LVME~i~G~~L~~l~------------~~~~~~~l~~qll~~l~~lH~~gIVHrDLKp  233 (397)
T 4gyi_A          173 ---EGFPVPEPIAQ---SR-HTIVMSLVDALPMRQVS------------SVPDPASLYADLIALILRLAKHGLIHGDFNE  233 (397)
T ss_dssp             ---TTCSCCCEEEE---ET-TEEEEECCSCEEGGGCC------------CCSCHHHHHHHHHHHHHHHHHTTEECSCCST
T ss_pred             ---cCCCCCeeeec---cC-ceEEEEecCCccHhhhc------------ccHHHHHHHHHHHHHHHHHHHCCCcCCCCCH
Confidence               333  222222   22 3799999998 764431            2234567889999999999999999999998


Q ss_pred             c
Q 008813          550 F  550 (552)
Q Consensus       550 ~  550 (552)
                      +
T Consensus       234 ~  234 (397)
T 4gyi_A          234 F  234 (397)
T ss_dssp             T
T ss_pred             H
Confidence            6

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=98.58  E-value=2.5e-07  Score=89.11  Aligned_cols=108  Identities=8%  Similarity=0.006  Sum_probs=85.4

Q ss_pred             CceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecCh-hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEEE
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK-DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLF  492 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk-~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hLy  492 (552)
                      ..|.+...++.|+.+.||++...  ++.++||+..... .....+.+|+.+|+.|..+     ..++++++++...+..|
T Consensus        14 ~~~~~~~~~~g~s~~~v~~~~~~--~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~-----~~vP~v~~~~~~~~~~~   86 (263)
T 3tm0_A           14 EKYRCVKDTEGMSPAKVYKLVGE--NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGK-----LPVPKVLHFERHDGWSN   86 (263)
T ss_dssp             TTSEEEECCSCCSSSEEEEEECS--SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTT-----SCCCCEEEEEEETTEEE
T ss_pred             ccceeEeeccCCCCCeEEEEECC--CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcC-----CCCCeEEEEEecCCceE
Confidence            45888999999999999999753  6789999987521 1234578999999999753     67889999999999999


Q ss_pred             EEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHh
Q 008813          493 IVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFL  539 (552)
Q Consensus       493 IVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs  539 (552)
                      +|||++.| +|.+.+.           +......++.++..+|..||+
T Consensus        87 lv~e~i~G~~l~~~~~-----------~~~~~~~~~~~l~~~l~~LH~  123 (263)
T 3tm0_A           87 LLMSEADGVLCSEEYE-----------DEQSPEKIIELYAECIRLFHS  123 (263)
T ss_dssp             EEEECCSSEEHHHHCC-----------TTTCHHHHHHHHHHHHHHHHH
T ss_pred             EEEEecCCeehhhccC-----------CcccHHHHHHHHHHHHHHHhC
Confidence            99999999 8876521           122334788999999999998

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=98.04  E-value=2.3e-05  Score=74.02  Aligned_cols=106  Identities=9%  Similarity=0.039  Sum_probs=73.8

Q ss_pred             ceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEEEEE
Q 008813          415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIV  494 (552)
Q Consensus       415 RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hLyIV  494 (552)
                      .|.+....+.|..+.||++.. .+++.++||+....  ....+.+|+.+++.|.++    .-.|++++.+....+..++|
T Consensus        21 ~~~~~~~~~gg~~~~v~~~~~-~~g~~~vlK~~~~~--~~~~~~~E~~~l~~l~~~----~~~vP~~~~~~~~~~~~~~v   93 (264)
T 1nd4_A           21 GYDWAQQTIGCSDAAVFRLSA-QGRPVLFVKTDLSG--ALNELQDEAARLSWLATT----GVPCAAVLDVVTEAGRDWLL   93 (264)
T ss_dssp             TCEEEECSCTTSSCEEEEEEC-TTSCCEEEEEECSC--TTSCHHHHHHHHHHHHTT----TCCBCCEEEEEECSSCEEEE
T ss_pred             CCceEecccCCCCceEEEEec-CCCCeEEEEeCCcc--cchhhhHHHHHHHHHHhC----CCCCCeEEEeccCCCCCEEE
Confidence            466654445666799999964 45678999998754  234578999999999862    12367788888888889999


Q ss_pred             EecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCC
Q 008813          495 CELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLL  541 (552)
Q Consensus       495 mEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~g  541 (552)
                      ||++.| +|.  ..  .       .+.   ..++.|+...|..||+..
T Consensus        94 ~e~i~G~~l~--~~--~-------~~~---~~~~~~l~~~l~~lh~~~  127 (264)
T 1nd4_A           94 LGEVPGQDLL--SS--H-------LAP---AEKVSIMADAMRRLHTLD  127 (264)
T ss_dssp             EECCSSEETT--TS--C-------CCH---HHHHHHHHHHHHHHTTSC
T ss_pred             EEecCCcccC--cC--c-------CCH---hHHHHHHHHHHHHHhCCC
Confidence            999998 663  11  0       121   246677777777777643

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=97.78  E-value=2.8e-05  Score=78.69  Aligned_cols=107  Identities=8%  Similarity=0.109  Sum_probs=77.0

Q ss_pred             EEEeccCCceEEEEEEECCCCcEEEEEEEe--cCh--hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeC---CEE
Q 008813          419 TEYLGSAAFSKVFQAQDLHTGVDVCLKIIK--NDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL---EHL  491 (552)
Q Consensus       419 le~LGkG~FG~VykA~Dkktg~~VAVKIIk--~sk--~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~---~hL  491 (552)
                      ++.|+.|.++.||+....  +..+++|+..  ...  .....+.+|+.+|+.|...    ...+++++.++...   +..
T Consensus        43 ~~~l~~G~sn~~y~v~~~--~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~----~vpvP~~~~~~~~~~~~g~~  116 (359)
T 3dxp_A           43 VEQFKGGQSNPTFKLVTP--GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGT----DVPVAKMYALCEDESVIGRA  116 (359)
T ss_dssp             EEECCC-CCSCEEEEECS--SCEEEEECCCC----------CHHHHHHHHHHHTTS----SSCCCCEEEEECCTTTTSSC
T ss_pred             EEEcCCcccceEEEEEEC--CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcC----CCCCCcEEEECCCCCccCCe
Confidence            567899999999998764  4578888776  322  1234678999999999862    14578888887766   458


Q ss_pred             EEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHh
Q 008813          492 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFL  539 (552)
Q Consensus       492 yIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs  539 (552)
                      |+|||++.| .|.+..    ..    .++......++.+++..|..||+
T Consensus       117 ~~vme~v~G~~l~~~~----~~----~l~~~~~~~~~~~l~~~La~LH~  157 (359)
T 3dxp_A          117 FYIMEFVSGRVLWDQS----LP----GMSPAERTAIYDEMNRVIAAMHT  157 (359)
T ss_dssp             EEEEECCCCBCCCCTT----CT----TCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEecCCeecCCCc----cc----cCCHHHHHHHHHHHHHHHHHHhC
Confidence            999999998 553310    01    16788888999999999999997

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=96.79  E-value=0.02  Score=54.80  Aligned_cols=101  Identities=8%  Similarity=0.084  Sum_probs=76.6

Q ss_pred             cCCce-EEEEEEECCCCcEEEEEEEecChhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEEEEEEecCCC-C
Q 008813          424 SAAFS-KVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCELLRA-N  501 (552)
Q Consensus       424 kG~FG-~VykA~Dkktg~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hLyIVmEll~G-s  501 (552)
                      .|.-+ .||+......+..+.||+-+..  ....+.+|..+|+.|..+     --|++++.+....+..|+|||++.| +
T Consensus        34 ~G~S~~~v~rl~~~~~~~~~~lk~~~~~--~~~~~~~E~~~l~~l~~~-----vPVP~v~~~~~~~~~~~lvme~l~G~~  106 (272)
T 4gkh_A           34 VGQSGATIYRLYGKPNAPELFLKHGKGS--VANDVTDEMVRLNWLTAF-----MPLPTIKHFIRTPDDAWLLTTAIPGKT  106 (272)
T ss_dssp             CSSSSCEEEEEECCTTCCCEEEEEEETH--HHHHHHHHHHHHHHHTTT-----SCCCCEEEEEEETTEEEEEEECCCSEE
T ss_pred             CCCcCCeEEEEEecCCCeEEEEEECCCC--CHhHHHHHHHHHHHhccC-----CCcCeEEEEEEECCeEEEEEEeeCCcc
Confidence            34433 6898877777788999987643  235678899999999753     3477888888889999999999999 7


Q ss_pred             HHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCC
Q 008813          502 LYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLL  541 (552)
Q Consensus       502 L~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~g  541 (552)
                      +.+......          .....+..++...|.-||+..
T Consensus       107 ~~~~~~~~~----------~~~~~~~~~l~~~L~~Lh~~~  136 (272)
T 4gkh_A          107 AFQVLEEYP----------DSGENIVDALAVFLRRLHSIP  136 (272)
T ss_dssp             HHHHHHHCG----------GGHHHHHHHHHHHHHHHHTSC
T ss_pred             ccccccCCH----------HHHHHHHHHHHHHHHHhcCCC
Confidence            877655321          234567889999999999764

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=96.71  E-value=0.018  Score=57.34  Aligned_cols=106  Identities=16%  Similarity=0.000  Sum_probs=77.5

Q ss_pred             EEeccCCceEEEEEEECCCCcEEEEEEEecChhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEE-eCCEEEEEEecC
Q 008813          420 EYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFY-HLEHLFIVCELL  498 (552)
Q Consensus       420 e~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~-~~~hLyIVmEll  498 (552)
                      +.++.|....||+.     +..++||+-+ .......+.+|.++|+.|.++-+   -.|++.+.+.. ..+..|+|||++
T Consensus        25 ~~l~~G~~n~v~~v-----g~~~VlR~~~-~~~~~~~~~~E~~~L~~L~~~~~---v~VP~~~~~~~~~~g~~~~v~e~i   95 (306)
T 3tdw_A           25 ESLGEGFRNYAILV-----NGDWVFRFPK-SQQGADELNKEIQLLPLLVGCVK---VNIPQYVYIGKRSDGNPFVGYRKV   95 (306)
T ss_dssp             EEEEECSSEEEEEE-----TTTEEEEEES-SHHHHHHHHHHHHHHHHHTTTCS---SBCCCEEEEEECTTSCEEEEEECC
T ss_pred             eecCCCcceeEEEE-----CCEEEEEecC-CchHHHHHHHHHHHHHHHHhcCC---CCCCCeEeecccCCCceEEEEecc
Confidence            45788888899987     4668889853 33345678899999999986311   23556655553 346678999999


Q ss_pred             CC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCC
Q 008813          499 RA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLV  542 (552)
Q Consensus       499 ~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gI  542 (552)
                      .| .|....-.  .      ++......++.|+...|..||+...
T Consensus        96 ~G~~l~~~~~~--~------l~~~~~~~~~~~lg~~La~LH~~~~  132 (306)
T 3tdw_A           96 QGQILGEDGMA--V------LPDDAKDRLALQLAEFMNELSAFPV  132 (306)
T ss_dssp             CSEECHHHHHT--T------SCHHHHHHHHHHHHHHHHHHHHSCH
T ss_pred             CCeECchhhhh--h------CCHHHHHHHHHHHHHHHHHHhcCCc
Confidence            99 67663221  1      6788888999999999999998653

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=96.10  E-value=0.012  Score=58.00  Aligned_cols=105  Identities=14%  Similarity=0.080  Sum_probs=74.0

Q ss_pred             EEeccCCceEEEEEEECCCCcEEEEEEEecChhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCC---EEEEEEe
Q 008813          420 EYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE---HLFIVCE  496 (552)
Q Consensus       420 e~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~---hLyIVmE  496 (552)
                      +.|+.|....||+..     ..++||+.+.. .....+.+|+++|+.|..+-..   .+++.+......+   ..|+||+
T Consensus        26 ~~~~~G~~n~v~~v~-----~~~vlR~~~~~-~~~~~~~~E~~~l~~l~~~~~v---~vP~~~~~~~~~~~~~~~~~vm~   96 (304)
T 3sg8_A           26 EISGEGNDCIAYEIN-----RDFIFKFPKHS-RGSTNLFNEVNILKRIHNKLPL---PIPEVVFTGMPSETYQMSFAGFT   96 (304)
T ss_dssp             CEEEECSSEEEEEST-----TSEEEEEESSH-HHHHHHHHHHHHHHHHTTSSSS---CCCCEEEECCCCSSCSCSCEEEE
T ss_pred             EecCCCCcceEEEEC-----CEEEEEecCCc-chHHHHHHHHHHHHHHHhcCCC---CCCceEeecCCCCCCCcceEEEc
Confidence            458899999999763     45889986543 3356788999999998653111   2444444433332   3589999


Q ss_pred             cCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCC
Q 008813          497 LLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLL  541 (552)
Q Consensus       497 ll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~g  541 (552)
                      ++.| .|......  .      ++..+...++.|+...|..||+..
T Consensus        97 ~i~G~~l~~~~~~--~------l~~~~~~~~~~~l~~~la~LH~~~  134 (304)
T 3sg8_A           97 KIKGVPLTPLLLN--N------LPKQSQNQAAKDLARFLSELHSIN  134 (304)
T ss_dssp             CCCCEECCHHHHH--T------SCHHHHHHHHHHHHHHHHHHHHSC
T ss_pred             ccCCeECCccccc--c------CCHHHHHHHHHHHHHHHHHHHcCC
Confidence            9999 66543321  1      788889999999999999999854

>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*

Probab=95.86  E-value=0.032  Score=57.07  Aligned_cols=104  Identities=16%  Similarity=0.044  Sum_probs=64.4

Q ss_pred             EEEeccCCceEEEEEEECCCCcEEEEEEEecCh--------hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCE
Q 008813          419 TEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK--------DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH  490 (552)
Q Consensus       419 le~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk--------~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~h  490 (552)
                      ++.||.|..+.||++.....++.++||......        .......+|+++|+.+....+   ..+++++.+  ..+.
T Consensus        35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~---~~vP~~~~~--d~~~  109 (397)
T 2olc_A           35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVP---HLVPRVFYS--DTEM  109 (397)
T ss_dssp             EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCG---GGSCCEEEE--ETTT
T ss_pred             EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCC---CCcCeEEEE--cCCc
Confidence            467899999999999766567889999865321        123456789999999865211   244556543  3455


Q ss_pred             EEEEEecCCC--CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHH
Q 008813          491 LFIVCELLRA--NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIF  538 (552)
Q Consensus       491 LyIVmEll~G--sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLH  538 (552)
                      .+||||++.+  .+...+....       ...    .++.++...|.-+|
T Consensus       110 ~~lvmE~l~g~~~~~~~l~~~~-------~~~----~~~~~l~~~La~lH  148 (397)
T 2olc_A          110 AVTVMEDLSHLKIARKGLIEGE-------NYP----HLSQHIGEFLGKTL  148 (397)
T ss_dssp             TEEEECCCTTSEEHHHHHHTTC-------CCT----THHHHHHHHHHHHH
T ss_pred             cEEEEEeCCCcchHHHHHhcCC-------cCH----HHHHHHHHHHHHHh
Confidence            6899999987  4544443221       111    23466666677777

>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}

Probab=94.21  E-value=0.29  Score=49.62  Aligned_cols=97  Identities=18%  Similarity=0.169  Sum_probs=72.7

Q ss_pred             EEEeccCCceEEEEEEECCCCcEEEEEEEecChhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEEEEEEecC
Q 008813          419 TEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCELL  498 (552)
Q Consensus       419 le~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hLyIVmEll  498 (552)
                      ++.|+.|....+|+...  .+..+.||+-...  ....+.+|..+|+.|....   ...|++.+.+....+..|+|||++
T Consensus        41 ~~~l~gG~~n~~y~v~~--~~~~~vlK~~~~~--~~~~~~~E~~~L~~L~~~~---~v~VP~vl~~~~~~g~~~lvme~l  113 (312)
T 3jr1_A           41 KEKLYSGEMNEIWLIND--EVQTVFVKINERS--YRSMFRAEADQLALLAKTN---SINVPLVYGIGNSQGHSFLLLEAL  113 (312)
T ss_dssp             EEEECCSSSSEEEEEES--SSCEEEEEEEEGG--GHHHHHHHHHHHHHHHHTT---SSBCCCEEEEEECSSEEEEEEECC
T ss_pred             eEEeCCccceeeeEEEE--CCCeEEEEeCCcc--cHHHHHHHHHHHHHHHhhC---CCCcceEEEEeecCCceEEEEEec
Confidence            56789999999999875  3567889987643  2466789999999997521   146778888777778899999999


Q ss_pred             CC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCC
Q 008813          499 RA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLV  542 (552)
Q Consensus       499 ~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gI  542 (552)
                      .+ .+                +.    ....++...|.-||+...
T Consensus       114 ~G~~~----------------~~----~~~~~lG~~LA~LH~~~~  138 (312)
T 3jr1_A          114 NKSKN----------------KQ----SSFTIFAEKIAQLHQIQG  138 (312)
T ss_dssp             CCCCC----------------CT----THHHHHHHHHHHHHHCCC
T ss_pred             cCCCC----------------Cc----hhHHHHHHHHHHHHcCCC
Confidence            98 32                11    235677888899998653

>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*

Probab=93.12  E-value=0.17  Score=50.54  Aligned_cols=122  Identities=7%  Similarity=-0.028  Sum_probs=78.3

Q ss_pred             EEEEEe-ccCCceEEEEEEEC--C----CCcEEEEEEEecCh---h-hHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEE
Q 008813          417 YVTEYL-GSAAFSKVFQAQDL--H----TGVDVCLKIIKNDK---D-FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYF  485 (552)
Q Consensus       417 ~Ile~L-GkG~FG~VykA~Dk--k----tg~~VAVKIIk~sk---~-~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F  485 (552)
                      ..++.| +.|....+|+....  .    .++.+.+|+.....   . ....+.+|+.+|+.|..+.   ...+++++.+.
T Consensus        23 ~~~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~---~vpvP~v~~~~   99 (357)
T 3ats_A           23 TVESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELT---DVPVPRVRWIE   99 (357)
T ss_dssp             EEEEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHC---CSCCCCEEEEE
T ss_pred             EEEEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcC---CCCCCcEEEEc
Confidence            345678 88888999987643  0    15678889765433   1 1245789999999997620   13466777766


Q ss_pred             EeC---CEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCC
Q 008813          486 YHL---EHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLL  541 (552)
Q Consensus       486 ~~~---~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~g  541 (552)
                      ...   +..|+|||++.| .|.+.+...-.......++..+...++.++...|.-||+..
T Consensus       100 ~~~~~~g~~~~v~e~l~G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~La~LH~~~  159 (357)
T 3ats_A          100 TTGDVLGTPFFLMDYVEGVVPPDVMPYTFGDNWFADAPAERQRQLQDATVAALATLHSIP  159 (357)
T ss_dssp             CSSTTTSSCEEEEECCCCBCCCBTTBGGGSCSTTTTSCHHHHHHHHHHHHHHHHHHTTCS
T ss_pred             cCCCccCCceEEEEecCCCChhhcCcccccccccCCCCHHHHHHHHHHHHHHHHHHhCCC
Confidence            544   456899999998 55432210000000001566667788999999999999764

>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}

Probab=85.33  E-value=2  Score=44.21  Aligned_cols=105  Identities=12%  Similarity=0.121  Sum_probs=62.6

Q ss_pred             EEEeccCCceEEEEEEECCCCcEEEEEEEecC-----hh---hHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCE
Q 008813          419 TEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND-----KD---FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH  490 (552)
Q Consensus       419 le~LGkG~FG~VykA~Dkktg~~VAVKIIk~s-----k~---~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~h  490 (552)
                      ++.||.|..+.||++..  .++.++||.....     ..   .......|.+++..+....+   ..+++++.+.  .+.
T Consensus        39 i~~l~~G~~n~vyrv~~--~~~~~vvK~~~p~~~~~~~~~~~~~~~~~~E~e~l~~~~~~~~---~~vP~v~~~~--~~~  111 (420)
T 2pyw_A           39 IKEVGDGNLNFVFIVVG--SSGSLVIKQALPYIRCIGESWPMTKERAYFEATTLRKHGNLSP---DHVPEVYHFD--RTM  111 (420)
T ss_dssp             EEECCCSSSCEEEEEEC--SSCEEEEEECCSBCTTTCTTSBCCTTHHHHHHHHHHHHHHHSG---GGSCCEEEEE--TTT
T ss_pred             EEEccCCCcEEEEEEEc--CCceEEEEECchhhcccCcccccchhHHHHHHHHHHHHHhhCC---CCCCeEEEEC--CCc
Confidence            46789999999999964  4577899943211     11   11233445555554432111   3566776654  566


Q ss_pred             EEEEEecC-CC--CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCC
Q 008813          491 LFIVCELL-RA--NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLL  541 (552)
Q Consensus       491 LyIVmEll-~G--sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~g  541 (552)
                      .++|||++ ++  .+...+.....      . .    ..+.++...|.-||...
T Consensus       112 ~~lv~e~l~~g~~~l~~~l~~~~~------~-~----~~~~~lg~~La~lH~~~  154 (420)
T 2pyw_A          112 ALIGMRYLEPPHIILRKGLIAGIE------Y-P----FLADHMSDYMAKTLFFT  154 (420)
T ss_dssp             TEEEECCCCTTCEEHHHHHHHTCC------C-T----THHHHHHHHHHHHHHTT
T ss_pred             cEEEEeecCCcchhHHHHHhcCCC------C-H----HHHHHHHHHHHHHHHhc
Confidence            79999999 87  56555443211      1 1    24566777788888654

>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}

Probab=84.20  E-value=2.5  Score=41.00  Aligned_cols=79  Identities=9%  Similarity=0.053  Sum_probs=54.4

Q ss_pred             CceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecCh-hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEEE
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK-DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLF  492 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk-~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hLy  492 (552)
                      .+..-++.+|.|..+.||+... .+|+.|.||+-.... .....+.+|...|+.|......   -+++.+.+  ..  -+
T Consensus        15 ~~v~~v~~~g~G~~~~vyrv~l-~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~v---pvP~v~~~--~~--~~   86 (288)
T 3f7w_A           15 REVAAVAERGHSHRWHLYRVEL-ADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGS---PVPQVAGW--DD--RT   86 (288)
T ss_dssp             CCEEEEEEEEEETTEEEEEEEE-TTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTC---CSCCEEEE--ET--TE
T ss_pred             CCeEEEEecCCCCCeEEEEEEE-CCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCC---CcceEEec--cC--ce
Confidence            4566678999999999999975 467889999876432 2234567899999999753222   34444443  22  37


Q ss_pred             EEEecCCC
Q 008813          493 IVCELLRA  500 (552)
Q Consensus       493 IVmEll~G  500 (552)
                      +|||++.+
T Consensus        87 lv~e~l~~   94 (288)
T 3f7w_A           87 LAMEWVDE   94 (288)
T ss_dssp             EEEECCCC
T ss_pred             EEEEeecc
Confidence            89999764

>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*

Probab=83.08  E-value=1.3  Score=46.00  Aligned_cols=100  Identities=13%  Similarity=0.063  Sum_probs=59.5

Q ss_pred             EEeccCCceEEEEEEECC-------CCcEEEEEEEecChhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEEE
Q 008813          420 EYLGSAAFSKVFQAQDLH-------TGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLF  492 (552)
Q Consensus       420 e~LGkG~FG~VykA~Dkk-------tg~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hLy  492 (552)
                      +.|..|--..+|++....       .++.+.||+............+|.++++.|..+     .-.++++..+.  +  .
T Consensus        56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~~~~~~~~rE~~vl~~L~~~-----gv~P~ll~~~~--~--g  126 (379)
T 3feg_A           56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAILQGVDSLVLESVMFAILAER-----SLGPQLYGVFP--E--G  126 (379)
T ss_dssp             EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC---CCHHHHHHHHHHHHHHHHT-----TSSCCEEEEET--T--E
T ss_pred             EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCccchHHHHHHHHHHHHHHHhc-----CCCCeEEEEcC--C--c
Confidence            355556667788887532       346788888643222234566999999999874     22355665544  3  2


Q ss_pred             EEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCC
Q 008813          493 IVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLV  542 (552)
Q Consensus       493 IVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gI  542 (552)
                      +||||+.| .|..    ..       +..   ..+..+|+..|.-||+..+
T Consensus       127 ~v~e~i~G~~l~~----~~-------l~~---p~~~~~ia~~La~LH~~~~  163 (379)
T 3feg_A          127 RLEQYIPSRPLKT----QE-------LRE---PVLSAAIATKMAQFHGMEM  163 (379)
T ss_dssp             EEEECCSEEECCG----GG-------GGC---HHHHHHHHHHHHHHHTCCC
T ss_pred             cEEEEecCccCCh----hH-------hCC---HHHHHHHHHHHHHHhCCCC
Confidence            99999998 4421    11       221   2356788999999998653

>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}

Probab=81.85  E-value=9.4  Score=36.90  Aligned_cols=72  Identities=19%  Similarity=0.314  Sum_probs=45.0

Q ss_pred             EEeccCCceEEEEEEECCCCcEEEEEEEecChhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEe------EEEeCCEEEE
Q 008813          420 EYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYD------YFYHLEHLFI  493 (552)
Q Consensus       420 e~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d------~F~~~~hLyI  493 (552)
                      +.|+.|..+.||++...  +..++||+.....   ..+..|+.+++.|..+.    -.|++++.      +....+..++
T Consensus        38 ~~l~gG~~n~~~~v~~~--~~~~vlk~~~~~~---~~~~~e~~~l~~L~~~g----~~vp~~~~~~~g~~~~~~~~~~~~  108 (346)
T 2q83_A           38 DVIQGNQMALVWKVHTD--SGAVCLKRIHRPE---KKALFSIFAQDYLAKKG----MNVPGILPNKKGSLYSKHGSFLFV  108 (346)
T ss_dssp             EECC----CEEEEEEET--TEEEEEEEECSCH---HHHHHHHHHHHHHHHHT----CSSCCBCCCTTSCSCEEETTEEEE
T ss_pred             eeccccccCcEEEEEeC--CCCEEEEecCCCH---HHHHHHHHHHHHHHHcC----CCCCceeecCCCCEEEEECCEEEE
Confidence            45666778899998753  3358999997642   34456788888877531    13344443      1235678899


Q ss_pred             EEecCCC
Q 008813          494 VCELLRA  500 (552)
Q Consensus       494 VmEll~G  500 (552)
                      ||+++.|
T Consensus       109 l~~~i~G  115 (346)
T 2q83_A          109 VYDWIEG  115 (346)
T ss_dssp             EEECCCC
T ss_pred             EEEeecC
Confidence            9999988

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	552
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	3e-14
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	1e-13
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	2e-13
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	1e-12
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	2e-12
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	2e-12
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	2e-12
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	3e-12
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	4e-12
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	6e-12
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	7e-12
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	7e-12
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	9e-12
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	1e-11
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	3e-11
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	3e-11
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	4e-11
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	7e-11
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	8e-11
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	8e-11
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	8e-11
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	8e-11
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	9e-11
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	2e-10
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	2e-10
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	2e-10
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	3e-10
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	3e-10
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	6e-10
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	7e-10
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	7e-10
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	2e-09
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	2e-09
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	3e-09
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	4e-09
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	6e-09
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	1e-08
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	3e-08
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	6e-08
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	1e-07
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	2e-07
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	2e-07
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	2e-07
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	2e-07
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	2e-07
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	3e-07
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	4e-07
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	1e-06
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	2e-06
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	2e-06
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	3e-06
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	3e-06
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	6e-06
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	6e-06
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	7e-06
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	1e-05
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	1e-05
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	3e-05
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	3e-05
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	6e-05
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	7e-05

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 72.0 bits (175), Expect = 3e-14
 Identities = 40/145 (27%), Positives = 61/145 (42%), Gaps = 6/145 (4%)

Query: 405 PIILNTVIA-GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKL 463
           P          RY +   LG   FS V+ A+D+     V +KI++ DK + + + DEIKL
Sbjct: 3   PAFKGEPYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKL 62

Query: 464 LKLVN-----KNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYF 518
           L+ VN     K D    +HIL+L D+F H     +   ++   L E      +       
Sbjct: 63  LQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGI 122

Query: 519 TLGRLQVCSTFLLTLLMLIFLLLVI 543
            L  ++  S  LL  L  +     I
Sbjct: 123 PLIYVKQISKQLLLGLDYMHRRCGI 147

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 69.5 bits (169), Expect = 1e-13
 Identities = 23/116 (19%), Positives = 43/116 (37%), Gaps = 6/116 (5%)

Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKND 471
           +  RY +   +GS +F  ++   D+  G +V +K+         Q   E K+ K++    
Sbjct: 5   VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK-HPQLHIESKIYKMMQ--- 60

Query: 472 PADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCS 527
                 I  +       ++  +V ELL  +L +   F           L   Q+ S
Sbjct: 61  --GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMIS 114

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 69.3 bits (169), Expect = 2e-13
 Identities = 19/95 (20%), Positives = 38/95 (40%), Gaps = 7/95 (7%)

Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKND 471
           +  +Y + E LG   F  V +  +  +      K +K           EI +L +     
Sbjct: 3   LYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIAR--- 59

Query: 472 PADEHHILRLYDYFYHLEHLFIVCELLRA-NLYEF 505
                +IL L++ F  +E L ++ E +   +++E 
Sbjct: 60  ---HRNILHLHESFESMEELVMIFEFISGLDIFER 91

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 67.0 bits (163), Expect = 1e-12
 Identities = 18/94 (19%), Positives = 41/94 (43%), Gaps = 9/94 (9%)

Query: 407 ILNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSL-DEIKLLK 465
           I +  +   Y + E LG+ AF  V +  +  TG +   K +    +   +++  EI+ + 
Sbjct: 19  IKHDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMS 78

Query: 466 LVNKNDPADEH-HILRLYDYFYHLEHLFIVCELL 498
           ++        H  ++ L+D F     + ++ E +
Sbjct: 79  VLR-------HPTLVNLHDAFEDDNEMVMIYEFM 105

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.8 bits (162), Expect = 2e-12
 Identities = 27/119 (22%), Positives = 50/119 (42%), Gaps = 13/119 (10%)

Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIK--NDKDFFDQSLDEIKLLKLVNK 469
           +  RY    Y+G  A+  V  A D    V V +K I     + +  ++L EIK+L     
Sbjct: 6   VGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR- 64

Query: 470 NDPADEHHILRLYDYFY-----HLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRL 523
                  +I+ + D         ++ +++V  L+ A+LY+  K    S     + L ++
Sbjct: 65  -----HENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQI 118

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.5 bits (159), Expect = 2e-12
 Identities = 21/107 (19%), Positives = 40/107 (37%), Gaps = 11/107 (10%)

Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK-------DFFDQSLDEIKLL 464
           +  +Y V   LGS  F  V+    +   + V +K ++ D+           +   E+ LL
Sbjct: 2   LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 61

Query: 465 KLVNKNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQE 511
           K V+         ++RL D+F   +   ++ E        F    + 
Sbjct: 62  KKVSSGFS----GVIRLLDWFERPDSFVLILERPEPVQDLFDFITER 104

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 65.6 bits (159), Expect = 2e-12
 Identities = 22/97 (22%), Positives = 37/97 (38%), Gaps = 6/97 (6%)

Query: 411 VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKN 470
           V+   Y V   +G  +F  +F+  +L     V +K      D   Q  DE +  KL+   
Sbjct: 2   VVGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD-APQLRDEYRTYKLLAGC 60

Query: 471 DPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQK 507
                  I  +Y +     H  +V +LL  +L +   
Sbjct: 61  -----TGIPNVYYFGQEGLHNVLVIDLLGPSLEDLLD 92

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 65.1 bits (158), Expect = 3e-12
 Identities = 23/97 (23%), Positives = 41/97 (42%), Gaps = 14/97 (14%)

Query: 410 TVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIK----NDKDFFDQSLDEIKLLK 465
           + ++ RY + E LG    S+V  A+DL    DV +K+++     D  F+ +   E +   
Sbjct: 3   SHLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAA 62

Query: 466 LVNKNDPADEHHILRLYDYFYHLEH----LFIVCELL 498
            +N         I+ +YD            +IV E +
Sbjct: 63  ALN------HPAIVAVYDTGEAETPAGPLPYIVMEYV 93

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 65.1 bits (158), Expect = 4e-12
 Identities = 25/98 (25%), Positives = 44/98 (44%), Gaps = 11/98 (11%)

Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQS--LDEIKLLKLVNK 469
           I   Y   + LG+ AFS+V  A+D  T   V +K I        +    +EI +L  +  
Sbjct: 7   IRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIK- 65

Query: 470 NDPADEH-HILRLYDYFYHLEHLFIVCELLRA-NLYEF 505
                 H +I+ L D +    HL+++ +L+    L++ 
Sbjct: 66  ------HPNIVALDDIYESGGHLYLIMQLVSGGELFDR 97

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.5 bits (156), Expect = 6e-12
 Identities = 26/102 (25%), Positives = 48/102 (47%), Gaps = 9/102 (8%)

Query: 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIK---NDKDFFDQSLDEIKLLKLVNKND 471
            +   E +G   +  V++A++  TG  V LK I+     +     ++ EI LLK +N   
Sbjct: 3   NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH-- 60

Query: 472 PADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESG 513
                +I++L D  +    L++V E L  +L +F   +  +G
Sbjct: 61  ----PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG 98

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.2 bits (156), Expect = 7e-12
 Identities = 18/87 (20%), Positives = 40/87 (45%), Gaps = 9/87 (10%)

Query: 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKII-KNDKDFFDQSLDEIKLLKLVNKNDP 472
            +Y   E +G  A   V+ A D+ TG +V ++ +    +   +  ++EI +++       
Sbjct: 20  KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENK---- 75

Query: 473 ADEH-HILRLYDYFYHLEHLFIVCELL 498
              + +I+   D +   + L++V E L
Sbjct: 76  ---NPNIVNYLDSYLVGDELWVVMEYL 99

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.9 bits (155), Expect = 7e-12
 Identities = 24/98 (24%), Positives = 44/98 (44%), Gaps = 7/98 (7%)

Query: 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKII-KNDKDFFDQSLDEIKLLKLVNKNDPA 473
            + +   LG  AF KV++AQ+  T V    K+I    ++  +  + EI +L   +     
Sbjct: 13  FWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDH---- 68

Query: 474 DEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQE 511
              +I++L D FY+  +L+I+ E       +      E
Sbjct: 69  --PNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELE 104

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 64.3 bits (156), Expect = 9e-12
 Identities = 20/89 (22%), Positives = 37/89 (41%), Gaps = 9/89 (10%)

Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSL-DEIKLLKLVNKN 470
           +   Y + E LGS AF  V +  +  TG     K I         ++ +EI ++  ++  
Sbjct: 27  VYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLH-- 84

Query: 471 DPADEH-HILRLYDYFYHLEHLFIVCELL 498
                H  ++ L+D F     + ++ E L
Sbjct: 85  -----HPKLINLHDAFEDKYEMVLILEFL 108

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.2 bits (153), Expect = 1e-11
 Identities = 22/114 (19%), Positives = 45/114 (39%), Gaps = 15/114 (13%)

Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQS-------LDEIKLL 464
           +   Y   E LGS  F+ V + ++  TG+    K IK  +    +          E+ +L
Sbjct: 8   VDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSIL 67

Query: 465 KLVNKNDPADEH-HILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAY 517
           K +        H +++ L++ + +   + ++ EL+           +ES  E  
Sbjct: 68  KEIQ-------HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEE 114

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.6 bits (151), Expect = 3e-11
 Identities = 23/102 (22%), Positives = 43/102 (42%), Gaps = 5/102 (4%)

Query: 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD---FFDQSLDEIKLLKLVNKN 470
            +Y     +G   F +VF+A+   TG  V LK +  + +   F   +L EIK+L+L+   
Sbjct: 10  SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHE 69

Query: 471 DPADEHHILRLYDYFYHLE--HLFIVCELLRANLYEFQKFNQ 510
           +  +   I R     Y+     +++V +    +L        
Sbjct: 70  NVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVL 111

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.4 bits (151), Expect = 3e-11
 Identities = 17/87 (19%), Positives = 33/87 (37%), Gaps = 10/87 (11%)

Query: 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIK--NDKDFFDQSLDEIKLLKLVNKNDP 472
            +     LG+     VF+     +G+ +  K+I         +Q + E+++L   N    
Sbjct: 7   DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECN---- 62

Query: 473 ADEH-HILRLYDYFYHLEHLFIVCELL 498
                +I+  Y  FY    + I  E +
Sbjct: 63  ---SPYIVGFYGAFYSDGEISICMEHM 86

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.5 bits (149), Expect = 4e-11
 Identities = 20/106 (18%), Positives = 44/106 (41%), Gaps = 15/106 (14%)

Query: 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIK----NDKDFFDQSLDEIKLLKLVNKN 470
            + +   LG   F  V+ A++  +   + LK++            Q   E+++   +   
Sbjct: 7   DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH- 65

Query: 471 DPADEHHILRLYDYFYHLEHLFIVCE-----LLRANLYEFQKFNQE 511
                 +ILRLY YF+    ++++ E      +   L +  KF+++
Sbjct: 66  -----PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ 106

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 61.2 bits (148), Expect = 7e-11
 Identities = 12/101 (11%), Positives = 38/101 (37%), Gaps = 12/101 (11%)

Query: 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIK----NDKDFFDQSLDEIKLLKLVNKN 470
            +     +G  +F  V+ A+D+     V +K +        + +   + E++ L+ +   
Sbjct: 16  LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR-- 73

Query: 471 DPADEH-HILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQ 510
                H + ++    +      ++V E    +  +  + ++
Sbjct: 74  -----HPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHK 109

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.7 bits (146), Expect = 8e-11
 Identities = 26/116 (22%), Positives = 48/116 (41%), Gaps = 9/116 (7%)

Query: 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIK---NDKDFFDQSLDEIKLLKLVNKND 471
           +Y   E +G   +  VF+A++  T   V LK ++   +D+     +L EI LLK +    
Sbjct: 3   KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELK--- 59

Query: 472 PADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCS 527
                +I+RL+D  +  + L +V E    +L ++                  Q+  
Sbjct: 60  ---HKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLK 112

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.5 bits (148), Expect = 8e-11
 Identities = 21/103 (20%), Positives = 44/103 (42%), Gaps = 3/103 (2%)

Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKN---DKDFFDQSLDEIKLLKLVN 468
           +  RY   + +GS A   V  A D     +V +K +     ++    ++  E+ L+K VN
Sbjct: 15  VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN 74

Query: 469 KNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQE 511
             +     ++          + +++V EL+ ANL +  +   +
Sbjct: 75  HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELD 117

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 60.7 bits (146), Expect = 8e-11
 Identities = 27/116 (23%), Positives = 51/116 (43%), Gaps = 10/116 (8%)

Query: 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKII---KNDKDFFDQSLDEIKLLKLVNKND 471
           +Y+  E +G   +  V++AQ+ + G    LK I   K D+     ++ EI +LK +    
Sbjct: 3   KYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELK--- 58

Query: 472 PADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCS 527
                +I++LYD  +  + L +V E L  +L +     +            LQ+ +
Sbjct: 59  ---HSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLN 111

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.0 bits (147), Expect = 8e-11
 Identities = 27/114 (23%), Positives = 49/114 (42%), Gaps = 12/114 (10%)

Query: 420 EYLGSAAFSKVFQAQDLHTGVDVCLKIIK------NDKDFFDQSLDEIKLLKLVNKNDPA 473
           ++LG   F+ V++A+D +T   V +K IK              +L EIKLL+ ++     
Sbjct: 4   DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSH---- 59

Query: 474 DEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCS 527
              +I+ L D F H  ++ +V + +  +L    K N      ++     L    
Sbjct: 60  --PNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQ 111

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.3 bits (148), Expect = 9e-11
 Identities = 25/101 (24%), Positives = 41/101 (40%), Gaps = 15/101 (14%)

Query: 411 VIAGRYYVT-EYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNK 469
            I   Y VT + LG     KV Q  +  T     LK++++          E++L    ++
Sbjct: 8   AIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKA----RREVELHWRASQ 63

Query: 470 NDPADEHHILRLYDYFYHL----EHLFIVCELLRA-NLYEF 505
                  HI+R+ D + +L    + L IV E L    L+  
Sbjct: 64  CP-----HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSR 99

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.6 bits (146), Expect = 2e-10
 Identities = 23/108 (21%), Positives = 44/108 (40%), Gaps = 15/108 (13%)

Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIK---NDKDFFDQSLDEIKLLKLVN 468
           +   Y   + +GS A+  V  A D  TG  V +K +      + F  ++  E++LLK + 
Sbjct: 16  VRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMR 75

Query: 469 KNDPADEHHILRLYDYFYHLE------HLFIVCELLRANLYEFQKFNQ 510
                   +++ L D F   E        ++V   +  +L +  K  +
Sbjct: 76  ------HENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEK 117

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.6 bits (144), Expect = 2e-10
 Identities = 17/87 (19%), Positives = 36/87 (41%), Gaps = 8/87 (9%)

Query: 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKII--KNDKDFFDQSLDEIKLLKLVNKND 471
             + + + LG  A+ +V  A +  T   V +KI+  K   D  +    EI + K++N   
Sbjct: 5   EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLN--- 61

Query: 472 PADEHHILRLYDYFYHLEHLFIVCELL 498
                ++++ Y +       ++  E  
Sbjct: 62  ---HENVVKFYGHRREGNIQYLFLEYC 85

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.2 bits (145), Expect = 2e-10
 Identities = 22/106 (20%), Positives = 50/106 (47%), Gaps = 15/106 (14%)

Query: 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPAD 474
            Y  T+ +G+ +F  V+QA+   +G  V +K +  DK F ++   E+++++ ++      
Sbjct: 21  SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLD------ 71

Query: 475 EHHILRLYDYFYH------LEHLFIVCELLRANLYEFQKFNQESGG 514
             +I+RL  +FY         +L +V + +   +Y   +    +  
Sbjct: 72  HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQ 117

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.9 bits (144), Expect = 3e-10
 Identities = 22/110 (20%), Positives = 42/110 (38%), Gaps = 3/110 (2%)

Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKN---DKDFFDQSLDEIKLLKLVN 468
           +  RY     +GS A+  V  A D  TG+ V +K +           ++  E++LLK + 
Sbjct: 16  VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK 75

Query: 469 KNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYF 518
             +      +            +++V  L+ A+L    K  + +     F
Sbjct: 76  HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 125

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.9 bits (142), Expect = 3e-10
 Identities = 17/89 (19%), Positives = 35/89 (39%), Gaps = 12/89 (13%)

Query: 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIK----NDKDFFDQSLDEIKLLKLVNKN 470
            +   + LG  +FS V  A++L T  +  +KI++      ++       E  ++  ++  
Sbjct: 9   DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-- 66

Query: 471 DPADEH-HILRLYDYFYHLEHLFIVCELL 498
                H   ++LY  F   E L+      
Sbjct: 67  -----HPFFVKLYFTFQDDEKLYFGLSYA 90

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 58.2 bits (140), Expect = 6e-10
 Identities = 21/102 (20%), Positives = 43/102 (42%), Gaps = 16/102 (15%)

Query: 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIK----------NDKDFFDQSLDEIKLL 464
            Y   E LG    S V +     T  +  +KII             ++  + +L E+ +L
Sbjct: 4   NYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDIL 63

Query: 465 KLVNKNDPADEHHILRLYDYFYHLEHLFIVCELLRA-NLYEF 505
           + V+        +I++L D +      F+V +L++   L+++
Sbjct: 64  RKVS-----GHPNIIQLKDTYETNTFFFLVFDLMKKGELFDY 100

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 58.2 bits (140), Expect = 7e-10
 Identities = 19/116 (16%), Positives = 43/116 (37%), Gaps = 12/116 (10%)

Query: 416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIK----NDKDFFDQSLDEIKLLKLVNKND 471
           + +   LG+ +F +V   +  H G    +K++K          + + DE  +L +V    
Sbjct: 6   FQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVT--- 62

Query: 472 PADEH-HILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVC 526
               H  I+R++  F   + +F++ + +            +            +VC
Sbjct: 63  ----HPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVC 114

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 58.6 bits (141), Expect = 7e-10
 Identities = 20/106 (18%), Positives = 39/106 (36%), Gaps = 7/106 (6%)

Query: 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIK----NDKDFFDQSLDEIKLLKLVNKN 470
            + V   +G   F +V+  +   TG    +K +       K     +L+E  +L LV+  
Sbjct: 5   DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG 64

Query: 471 DPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEA 516
              D   I+ +   F+  + L  + +L+      +         EA
Sbjct: 65  ---DCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEA 107

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 57.0 bits (137), Expect = 2e-09
 Identities = 14/85 (16%), Positives = 34/85 (40%), Gaps = 8/85 (9%)

Query: 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPAD 474
              +   LG   + +V++       + V +K +K D    ++ L E  ++K +       
Sbjct: 18  DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIK------ 71

Query: 475 EH-HILRLYDYFYHLEHLFIVCELL 498
            H ++++L          +I+ E +
Sbjct: 72  -HPNLVQLLGVCTREPPFYIITEFM 95

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 57.2 bits (137), Expect = 2e-09
 Identities = 22/96 (22%), Positives = 39/96 (40%), Gaps = 7/96 (7%)

Query: 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPAD 474
            Y +   LG   +S+VF+A ++     V +KI+K  K    +   EIK+L+ +       
Sbjct: 36  DYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKK--KKIKREIKILENLRGGP--- 90

Query: 475 EHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQ 510
             +I+ L D                 N  +F++  Q
Sbjct: 91  --NIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQ 124

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.8 bits (134), Expect = 3e-09
 Identities = 20/97 (20%), Positives = 41/97 (42%), Gaps = 14/97 (14%)

Query: 410 TVIAGRYY-VTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKN---DKDFFDQSLDEIKLLK 465
               GR+      +G  +F  V++  D  T V+V    +++    K    +  +E ++LK
Sbjct: 4   MSNDGRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLK 63

Query: 466 LVNKNDPADEHHILRLYDYFYHL----EHLFIVCELL 498
            +         +I+R YD +       + + +V EL+
Sbjct: 64  GLQ------HPNIVRFYDSWESTVKGKKCIVLVTELM 94

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.7 bits (133), Expect = 4e-09
 Identities = 24/105 (22%), Positives = 45/105 (42%), Gaps = 6/105 (5%)

Query: 415 RYYVTEYLGSAAFSKVFQAQDLHT-GVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPA 473
           +Y     +G  A+ KVF+A+DL   G  V LK ++         L  I+ + ++   +  
Sbjct: 8   QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETF 67

Query: 474 DEHHILRLYDYFY-----HLEHLFIVCELLRANLYEFQKFNQESG 513
           +  +++RL+D            L +V E +  +L  +     E G
Sbjct: 68  EHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPG 112

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.5 bits (133), Expect = 6e-09
 Identities = 22/88 (25%), Positives = 40/88 (45%), Gaps = 9/88 (10%)

Query: 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKN 470
            + + + LG  +F KVF A+   T     +K +K D     D  + ++ E ++L L  ++
Sbjct: 3   DFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEH 62

Query: 471 DPADEHHILRLYDYFYHLEHLFIVCELL 498
                  +  ++  F   E+LF V E L
Sbjct: 63  P-----FLTHMFCTFQTKENLFFVMEYL 85

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.9 bits (129), Expect = 1e-08
 Identities = 18/84 (21%), Positives = 36/84 (42%), Gaps = 9/84 (10%)

Query: 416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADE 475
               + LG+  F  V   +      DV +K+IK      D+ ++E K++  ++       
Sbjct: 6   LTFLKELGTGQFGVVKYGK-WRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLS------- 57

Query: 476 H-HILRLYDYFYHLEHLFIVCELL 498
           H  +++LY        +FI+ E +
Sbjct: 58  HEKLVQLYGVCTKQRPIFIITEYM 81

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.7 bits (126), Expect = 3e-08
 Identities = 20/85 (23%), Positives = 35/85 (41%), Gaps = 10/85 (11%)

Query: 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPAD 474
              + E LG+  F +V+     +    V +K +K      D  L E  L+K +       
Sbjct: 14  TLKLVERLGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQ------ 66

Query: 475 EH-HILRLYDYFYHLEHLFIVCELL 498
            H  ++RLY      E ++I+ E +
Sbjct: 67  -HQRLVRLYAVVTQ-EPIYIITEYM 89

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.0 bits (124), Expect = 6e-08
 Identities = 14/85 (16%), Positives = 32/85 (37%), Gaps = 9/85 (10%)

Query: 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPAD 474
                + +GS  F  V     L     V +K I+      +  ++E +++  ++      
Sbjct: 6   ELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAMSEEDFIEEAEVMMKLS------ 58

Query: 475 EH-HILRLYDYFYHLEHLFIVCELL 498
            H  +++LY        + +V E +
Sbjct: 59  -HPKLVQLYGVCLEQAPICLVFEFM 82

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.1 bits (122), Expect = 1e-07
 Identities = 16/88 (18%), Positives = 33/88 (37%), Gaps = 11/88 (12%)

Query: 416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIK---NDKDFFDQSLDEIKLLKLVNKNDP 472
           Y V   +G+ ++ +  + +    G  +  K +      +      + E+ LL+ +     
Sbjct: 6   YEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELK---- 61

Query: 473 ADEHHILRLYDYFYHLE--HLFIVCELL 498
               +I+R YD         L+IV E  
Sbjct: 62  --HPNIVRYYDRIIDRTNTTLYIVMEYC 87

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 51.0 bits (121), Expect = 2e-07
 Identities = 24/128 (18%), Positives = 55/128 (42%), Gaps = 16/128 (12%)

Query: 393 KNRTGFEENKDLPIILNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK- 451
           K +  F +  + P   NT    ++   + LG+ +F +V   +   +G    +KI+   K 
Sbjct: 21  KAKEDFLKKWETPS-QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKV 79

Query: 452 ---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVC-----ELLRANLY 503
                 + +L+E ++L+ VN         +++L   F    +L++V        + ++L 
Sbjct: 80  VKLKQIEHTLNEKRILQAVNF------PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR 133

Query: 504 EFQKFNQE 511
              +F++ 
Sbjct: 134 RIGRFSEP 141

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.0 bits (121), Expect = 2e-07
 Identities = 21/124 (16%), Positives = 47/124 (37%), Gaps = 13/124 (10%)

Query: 415 RYYVTEYLGSAAFSKVFQAQDLH-----TGVDVCLKIIKNDKDFFDQS--LDEIKLLKLV 467
           R    + LG+ AF KV +A           + V +K++K      ++   + E+K+L  +
Sbjct: 24  RLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYL 83

Query: 468 NKNDPADEHHILRLYDYFYHLEHLFIVCELL-RANLYEFQKFNQESGGEAYFTLGRLQVC 526
                 +  +I+ L           ++ E     +L  F +  ++S   +  +   ++  
Sbjct: 84  -----GNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDD 138

Query: 527 STFL 530
              L
Sbjct: 139 ELAL 142

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.6 bits (120), Expect = 2e-07
 Identities = 17/121 (14%), Positives = 44/121 (36%), Gaps = 13/121 (10%)

Query: 415 RYYVTEYLGSAAFSKVFQAQDLH---TGVDVCLKIIK-----NDKDFFDQSLDEIKLLKL 466
            + + + LG+ A+ KVF  + +    TG    +K++K           + +  E ++L+ 
Sbjct: 25  NFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEH 84

Query: 467 VNKNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVC 526
           +          ++ L+  F     L ++ + +           +E   E    +   ++ 
Sbjct: 85  IR-----QSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIV 139

Query: 527 S 527
            
Sbjct: 140 L 140

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.6 bits (120), Expect = 2e-07
 Identities = 18/85 (21%), Positives = 33/85 (38%), Gaps = 10/85 (11%)

Query: 416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND----KDFFDQSLDEIKLLKLVNKND 471
           +   + LG   F KV   ++  TG    +KI++ +    KD    ++ E ++L+      
Sbjct: 7   FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR--- 63

Query: 472 PADEHHILRLYDYFYHLEHLFIVCE 496
                 +  L   F   + L  V E
Sbjct: 64  ---HPFLTALKYAFQTHDRLCFVME 85

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.1 bits (119), Expect = 2e-07
 Identities = 17/84 (20%), Positives = 33/84 (39%), Gaps = 8/84 (9%)

Query: 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPAD 474
              +   LG   F +V+      T   V +K +K      +  L E +++K +       
Sbjct: 18  SLRLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKLR------ 70

Query: 475 EHHILRLYDYFYHLEHLFIVCELL 498
              +++LY      E ++IV E +
Sbjct: 71  HEKLVQLYAVVSE-EPIYIVTEYM 93

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.6 bits (118), Expect = 3e-07
 Identities = 18/86 (20%), Positives = 33/86 (38%), Gaps = 12/86 (13%)

Query: 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPAD 474
              + + +G   F  V      + G  V +K IKND       L E  ++  +       
Sbjct: 8   ELKLLQTIGKGEFGDVMLGD--YRGNKVAVKCIKNDAT-AQAFLAEASVMTQLR------ 58

Query: 475 EH-HILRLYDYFYHLE-HLFIVCELL 498
            H ++++L       +  L+IV E +
Sbjct: 59  -HSNLVQLLGVIVEEKGGLYIVTEYM 83

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.8 bits (118), Expect = 4e-07
 Identities = 16/92 (17%), Positives = 34/92 (36%), Gaps = 12/92 (13%)

Query: 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKND 471
           IA    + E +G   F +V++ +    G +V +KI  + ++       E ++ + V    
Sbjct: 1   IARTIVLQESIGKGRFGEVWRGK--WRGEEVAVKIFSSREE--RSWFREAEIYQTVMLRH 56

Query: 472 PADEHHILRLYDYFYH----LEHLFIVCELLR 499
                +IL               L++V +   
Sbjct: 57  E----NILGFIAADNKDNGTWTQLWLVSDYHE 84

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.3 bits (114), Expect = 1e-06
 Identities = 15/83 (18%), Positives = 33/83 (39%), Gaps = 9/83 (10%)

Query: 420 EYLGSAAFSKVFQAQDLHTGVDVCLKIIK----NDKDFFDQSLDEIKLLKLVNKNDPADE 475
           + +G   F +V +A+    G+ +   I +      KD       E+++L  +  +     
Sbjct: 16  DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHP---- 71

Query: 476 HHILRLYDYFYHLEHLFIVCELL 498
            +I+ L     H  +L++  E  
Sbjct: 72  -NIINLLGACEHRGYLYLAIEYA 93

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.5 bits (112), Expect = 2e-06
 Identities = 21/118 (17%), Positives = 45/118 (38%), Gaps = 12/118 (10%)

Query: 416 YYVTEYLGSAAFSKVFQAQDLHTG----VDVCLKIIK--NDKDFFDQSLDEIKLLKLVNK 469
           +   + LGS AF  V++   +  G    + V +K ++         + LDE  ++  V+ 
Sbjct: 11  FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 70

Query: 470 NDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCS 527
                  H+ RL           I   +    L ++ + ++++ G  Y     +Q+  
Sbjct: 71  ------PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 122

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.5 bits (112), Expect = 2e-06
 Identities = 20/109 (18%), Positives = 43/109 (39%), Gaps = 13/109 (11%)

Query: 415 RYYVTEYLGSAAFSKVFQAQDLHTG-----VDVCLKIIKNDKD--FFDQSLDEIKLLKLV 467
                + LGS AF KV  A           + V +K++K   D    +  + E+K++  +
Sbjct: 38  NLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQL 97

Query: 468 NKNDPADEHHILRLYDYFYHLEHLFIVCELL-RANLYEFQKFNQESGGE 515
             ++     +I+ L         ++++ E     +L  + +  +E   E
Sbjct: 98  GSHE-----NIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSE 141

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.7 bits (110), Expect = 3e-06
 Identities = 22/119 (18%), Positives = 39/119 (32%), Gaps = 13/119 (10%)

Query: 415 RYYVTEYLGSAAFSKVFQAQDLHT---GVDVCLKIIKN--DKDFFDQSLDEIKLLKLVNK 469
           R  +   +G   F  V Q   +      + V +K  KN       ++ L E   ++  + 
Sbjct: 8   RIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFD- 66

Query: 470 NDPADEH-HILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCS 527
                 H HI++L           I+       L  F +  + S   A   L   Q+ +
Sbjct: 67  ------HPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLST 119

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.8 bits (110), Expect = 3e-06
 Identities = 24/114 (21%), Positives = 52/114 (45%), Gaps = 15/114 (13%)

Query: 415 RYYVTEYLGSAAFSKVFQAQDLHTGVD-------VCLKIIKND--KDFFDQSLDEIKLLK 465
           R  + + LG  AF +V  A+ +    D       V +K++K+D  +      + E++++K
Sbjct: 14  RLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMK 73

Query: 466 LVNKNDPADEHHILRLYDYFYHLEHLFIVCELL-RANLYEFQKFNQESGGEAYF 518
           ++ K+      +I+ L         L+++ E   + NL E+ +  +  G E  +
Sbjct: 74  MIGKH-----KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSY 122

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 45.9 bits (108), Expect = 6e-06
 Identities = 12/89 (13%), Positives = 31/89 (34%), Gaps = 11/89 (12%)

Query: 415 RYYVTEYLGSAAFSKVFQAQDLHTG---VDVCLKIIKND--KDFFDQSLDEIKLLKLVNK 469
              + + +G+  F +V        G   + V +K +K+   +      L E  ++   + 
Sbjct: 27  CVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFD- 85

Query: 470 NDPADEHHILRLYDYFYHLEHLFIVCELL 498
                  +++ L         + I+ E +
Sbjct: 86  -----HPNVIHLEGVVTKSTPVMIITEFM 109

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.9 bits (108), Expect = 6e-06
 Identities = 19/81 (23%), Positives = 35/81 (43%), Gaps = 11/81 (13%)

Query: 422 LGSAAFSKVFQAQDLHT--GVDVCLKIIK--NDKDFFDQSLDEIKLLKLVNKNDPADEHH 477
           LG   F  V Q         +DV +K++K   +K   ++ + E +++  +      D  +
Sbjct: 17  LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQL------DNPY 70

Query: 478 ILRLYDYFYHLEHLFIVCELL 498
           I+RL       E L +V E+ 
Sbjct: 71  IVRLIGVCQA-EALMLVMEMA 90

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.5 bits (107), Expect = 7e-06
 Identities = 20/82 (24%), Positives = 34/82 (41%), Gaps = 12/82 (14%)

Query: 422 LGSAAFSKVFQA--QDLHTGVDVCLKIIK---NDKDFFDQSLDEIKLLKLVNKNDPADEH 476
           LGS  F  V +   Q       V +KI+K   ND    D+ L E  +++ ++        
Sbjct: 15  LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDN------P 68

Query: 477 HILRLYDYFYHLEHLFIVCELL 498
           +I+R+       E   +V E+ 
Sbjct: 69  YIVRMIGICEA-ESWMLVMEMA 89

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.1 bits (106), Expect = 1e-05
 Identities = 18/92 (19%), Positives = 36/92 (39%), Gaps = 16/92 (17%)

Query: 415 RYYVTEYLGSAAFSKVFQAQ---DLHTGVDVCLKIIK----NDKDFFDQSLDEIKLLKLV 467
              + E LG  +F  V + +        V V +K +K    +  +  D  + E+  +  +
Sbjct: 9   DLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL 68

Query: 468 NKNDPADEH-HILRLYDYFYHLEHLFIVCELL 498
           +       H +++RLY        + +V EL 
Sbjct: 69  D-------HRNLIRLYGVVLT-PPMKMVTELA 92

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.8 bits (105), Expect = 1e-05
 Identities = 19/108 (17%), Positives = 35/108 (32%), Gaps = 16/108 (14%)

Query: 401 NKDLPIILNTVIAGRYYVT----EYLGSAAFSKVFQAQDLH---TGVDVCLKIIK--NDK 451
           N +L   +  V+ G   +     E +G   F  V+    L      +   +K +    D 
Sbjct: 10  NPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDI 69

Query: 452 DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE-HLFIVCELL 498
               Q L E  ++K  +        ++L L       E    +V   +
Sbjct: 70  GEVSQFLTEGIIMKDFSH------PNVLSLLGICLRSEGSPLVVLPYM 111

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.8 bits (103), Expect = 3e-05
 Identities = 22/117 (18%), Positives = 39/117 (33%), Gaps = 12/117 (10%)

Query: 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDV-CLKIIKNDKDFFDQSLDEIKLLKLVNKNDP 472
           G+  V + +GS +F  V++ +  H  V V  L +            +E+ +L+       
Sbjct: 8   GQITVGQRIGSGSFGTVYKGK-WHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTR---- 62

Query: 473 ADEH-HILRLYDYFYHLEHLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVCS 527
              H +IL    Y      L IV +    ++LY      +             Q   
Sbjct: 63  ---HVNILLFMGYSTA-PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQ 115

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.7 bits (102), Expect = 3e-05
 Identities = 16/91 (17%), Positives = 35/91 (38%), Gaps = 13/91 (14%)

Query: 415 RYYVTEYLGSAAFSKVFQAQD-----LHTGVDVCLKIIKNDKDFFDQS--LDEIKLLKLV 467
           +  ++  LG  +F  V++              V +K +       ++   L+E  ++K  
Sbjct: 21  KITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEF 80

Query: 468 NKNDPADEHHILRLYDYFYHLEHLFIVCELL 498
           N       HH++RL       +   ++ EL+
Sbjct: 81  N------CHHVVRLLGVVSQGQPTLVIMELM 105

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.5 bits (99), Expect = 6e-05
 Identities = 15/81 (18%), Positives = 32/81 (39%), Gaps = 12/81 (14%)

Query: 422 LGSAAFSKVFQAQDLHTG----VDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADE 475
           +G+  F +V++     +     V V +K +K    +      L E  ++   +       
Sbjct: 15  IGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSH------ 68

Query: 476 HHILRLYDYFYHLEHLFIVCE 496
           H+I+RL       + + I+ E
Sbjct: 69  HNIIRLEGVISKYKPMMIITE 89

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 42.5 bits (99), Expect = 7e-05
 Identities = 16/91 (17%), Positives = 33/91 (36%), Gaps = 13/91 (14%)

Query: 415 RYYVTEYLGSAAFSKVFQAQ-----DLHTGVDVCLKIIKND--KDFFDQSLDEIKLLKLV 467
                  +G  AF +VFQA+            V +K++K +   D       E  L+   
Sbjct: 14  NIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEF 73

Query: 468 NKNDPADEHHILRLYDYFYHLEHLFIVCELL 498
           +        +I++L       + + ++ E +
Sbjct: 74  DN------PNIVKLLGVCAVGKPMCLLFEYM 98

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	552
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	99.93
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	99.92
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	99.92
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	99.91
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	99.91
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	99.91
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	99.91
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	99.91
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	99.91
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	99.91
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	99.91
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	99.91
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	99.91
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	99.91
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	99.91
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	99.91
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	99.9
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	99.9
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	99.9
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	99.9
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	99.89
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	99.89
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	99.89
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	99.89
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	99.89
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	99.89
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	99.89
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	99.89
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	99.88
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	99.88
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	99.88
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	99.88
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	99.88
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	99.88
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	99.88
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	99.88
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	99.87
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	99.87
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	99.87
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	99.87
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	99.87
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	99.86
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	99.86
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	99.86
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	99.86
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	99.86
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	99.86
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	99.86
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	99.85
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.85
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	99.85
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.84
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	99.84
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	99.84
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	99.83
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	99.83
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	99.83
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	99.83
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	99.83
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.81
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	99.8
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	99.79
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	99.58
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	96.18
d2pula1	392	Methylthioribose kinase MtnK {Bacillus subtilis [T	91.93
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	89.72

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=1.6e-25  Score=225.94  Aligned_cols=127  Identities=17%  Similarity=0.205  Sum_probs=117.5

Q ss_pred             ecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEE
Q 008813          412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL  491 (552)
Q Consensus       412 i~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hL  491 (552)
                      +.+||++++.||+|+||+||+|.++.+++.||||+++........+.+|+++|+.++|      ||||+++++|...+++
T Consensus         3 ~~~rY~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~~~~~~~~~Ei~il~~l~H------pnIv~~~~~~~~~~~~   76 (321)
T d1tkia_           3 LYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARH------RNILHLHESFESMEEL   76 (321)
T ss_dssp             CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTHHHHHHHHHHHHHHHSCC------TTBCCEEEEEEETTEE
T ss_pred             CccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCCcccHHHHHHHHHHHHhCCC------CCCCeEEEEEEECCEE
Confidence            5689999999999999999999999999999999998775555678899999999998      9999999999999999


Q ss_pred             EEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          492 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       492 yIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      |||||||.| +|.++|+..+.     ++++.+++.|+.||+.||.|||++||||+|||+
T Consensus        77 ~lvmE~~~gg~L~~~i~~~~~-----~l~e~~~~~i~~qi~~al~yLH~~~iiHrDlKp  130 (321)
T d1tkia_          77 VMIFEFISGLDIFERINTSAF-----ELNEREIVSYVHQVCEALQFLHSHNIGHFDIRP  130 (321)
T ss_dssp             EEEECCCCCCBHHHHHTSSSC-----CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCG
T ss_pred             EEEEecCCCCcHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHHcCCCcccccc
Confidence            999999987 99999976542     289999999999999999999999999999997

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=4.8e-25  Score=218.41  Aligned_cols=126  Identities=20%  Similarity=0.286  Sum_probs=115.9

Q ss_pred             ecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecCh-------hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeE
Q 008813          412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK-------DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDY  484 (552)
Q Consensus       412 i~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk-------~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~  484 (552)
                      +.+||++++.||+|+||+||+|+++.+++.||||++++..       ...+.+.+|+++|+.|+|      ||||+++++
T Consensus         8 i~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~H------pnIv~~~~~   81 (293)
T d1jksa_           8 VDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQH------PNVITLHEV   81 (293)
T ss_dssp             GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCC------TTBCCEEEE
T ss_pred             cccCEEEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCC------CCCCcEEEE
Confidence            5679999999999999999999999999999999997531       135678999999999998      999999999


Q ss_pred             EEeCCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          485 FYHLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       485 F~~~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      |.+.+++|||||||.+ +|.++++.++.      +++..++.|+.||+.||.|||+++|||+|||+
T Consensus        82 ~~~~~~~~iv~E~~~gg~L~~~i~~~~~------l~~~~~~~~~~qi~~al~yLH~~~ivHrDiKp  141 (293)
T d1jksa_          82 YENKTDVILILELVAGGELFDFLAEKES------LTEEEATEFLKQILNGVYYLHSLQIAHFDLKP  141 (293)
T ss_dssp             EECSSEEEEEEECCCSCBHHHHHHHHSS------CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSG
T ss_pred             EEECCEEEEEEEcCCCccccchhccccc------cchhHHHHHHHHHHHHHHhhhhcceeeccccc
Confidence            9999999999999987 99999987653      99999999999999999999999999999996

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=2.8e-25  Score=219.73  Aligned_cols=125  Identities=15%  Similarity=0.150  Sum_probs=112.3

Q ss_pred             cCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecCh--hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCE
Q 008813          413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH  490 (552)
Q Consensus       413 ~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk--~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~h  490 (552)
                      .++|++++.||+|+||+||+|+++.+++.||||+++...  ...+.+.+|+++|+.++|      ||||++++++...+.
T Consensus         4 ~~dy~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l~H------pnIv~~~~~~~~~~~   77 (271)
T d1nvra_           4 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH------ENVVKFYGHRREGNI   77 (271)
T ss_dssp             TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHTCCC------TTBCCEEEEEEETTE
T ss_pred             CcceEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHhCCC------CCEeeEeeeeccCce
Confidence            357999999999999999999999999999999997642  234578899999999998      999999999999999


Q ss_pred             EEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          491 LFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       491 LyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      +|||||||.+ +|.++++.+..      +++.+++.|++||+.||.|||++||||+|||+
T Consensus        78 ~~ivmEy~~gg~L~~~l~~~~~------l~e~~~~~i~~qi~~al~ylH~~~IiHrDiKp  131 (271)
T d1nvra_          78 QYLFLEYCSGGELFDRIEPDIG------MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKP  131 (271)
T ss_dssp             EEEEEECCTTEEGGGGSBTTTB------CCHHHHHHHHHHHHHHHHHHHHTTEECSCCCG
T ss_pred             eEEEEeccCCCcHHHHHhcCCC------CCHHHHHHHHHHHHHHHHHHHHcCCccCcccH
Confidence            9999999987 99999875443      99999999999999999999999999999997

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=1.1e-24  Score=214.33  Aligned_cols=124  Identities=20%  Similarity=0.245  Sum_probs=114.3

Q ss_pred             CceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC----hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCC
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND----KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE  489 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s----k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~  489 (552)
                      ++|++++.||+|+||+||+|+++.+++.||||++.+.    ......+.+|+++|+.++|      ||||++++++.+.+
T Consensus         6 ~dy~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~h------pnIv~~~~~~~~~~   79 (263)
T d2j4za1           6 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH------PNILRLYGYFHDAT   79 (263)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCC------TTBCCEEEEEECSS
T ss_pred             hHeEEEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCC------CCCCeEEEEEEECC
Confidence            5799999999999999999999999999999999753    2245678899999999998      99999999999999


Q ss_pred             EEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          490 HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       490 hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ++|||||||.+ +|.++++....      +++..++.|+.||+.||.|||++||||+|||+
T Consensus        80 ~~~ivmEy~~~g~L~~~l~~~~~------l~e~~~~~i~~qi~~al~~lH~~~ivHrDiKp  134 (263)
T d2j4za1          80 RVYLILEYAPLGTVYRELQKLSK------FDEQRTATYITELANALSYCHSKRVIHRDIKP  134 (263)
T ss_dssp             EEEEEEECCTTCBHHHHHHHHSS------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCG
T ss_pred             EEEEEEeecCCCcHHHHHhhcCC------CCHHHHHHHHHHHHHHHHHHHHCCeeeeeecc
Confidence            99999999987 99999987653      99999999999999999999999999999997

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.91  E-value=6.5e-25  Score=220.45  Aligned_cols=127  Identities=22%  Similarity=0.212  Sum_probs=112.1

Q ss_pred             eecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecCh--hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeC
Q 008813          411 VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL  488 (552)
Q Consensus       411 vi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk--~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~  488 (552)
                      .+.++|++++.||+|+||+||+|+++.+++.||||++....  .....+.+|+++|+.|+|      ||||+++++|.+.
T Consensus         6 di~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~H------pnIv~l~~~~~~~   79 (307)
T d1a06a_           6 DIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKH------PNIVALDDIYESG   79 (307)
T ss_dssp             CGGGTEEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC----------CHHHHHHHTCCC------TTBCCEEEEEECS
T ss_pred             CCccceEEEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhhhHHHHHHHHHHHHHhCCC------CCCCcEEEEEEEC
Confidence            46678999999999999999999999999999999998642  233567799999999998      9999999999999


Q ss_pred             CEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          489 EHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       489 ~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      +++|||||||.| +|.+++..++.      +++..++.|+.||+.||.|||++||||+|||+
T Consensus        80 ~~~~lvmE~~~gg~L~~~l~~~~~------l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp  135 (307)
T d1a06a_          80 GHLYLIMQLVSGGELFDRIVEKGF------YTERDASRLIFQVLDAVKYLHDLGIVHRDLKP  135 (307)
T ss_dssp             SEEEEEECCCCSCBHHHHHHTCSC------CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCG
T ss_pred             CEEEEEEeccCCCcHHHhhhcccC------CCHHHHHHHHHHHHHHHHhhhhceeeeEEecc
Confidence            999999999986 99999986543      99999999999999999999999999999996

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=7.1e-25  Score=219.24  Aligned_cols=124  Identities=19%  Similarity=0.249  Sum_probs=113.6

Q ss_pred             cCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecCh-hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEE
Q 008813          413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK-DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL  491 (552)
Q Consensus       413 ~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk-~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hL  491 (552)
                      .+||++++.||+|+||+||+|+++.+++.||||+++... ...+.+.+|+.+|+.++|      ||||+++++|...+++
T Consensus        19 ~~~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H------pnIv~~~~~~~~~~~~   92 (293)
T d1yhwa1          19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKN------PNIVNYLDSYLVGDEL   92 (293)
T ss_dssp             TTTBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCC------TTBCCEEEEEEETTEE
T ss_pred             ccccEEEEEEecCcCcEEEEEEECCCCCEEEEEEEecccChHHHHHHHHHHHHHhCCC------CCEeeEeEEEEECCEE
Confidence            468999999999999999999999999999999997642 234678999999999998      9999999999999999


Q ss_pred             EEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          492 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       492 yIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      |||||||.+ +|.+++..+.       +++..++.|++||+.||.|||++||||+|||+
T Consensus        93 ~ivmEy~~gg~L~~~~~~~~-------l~~~~~~~i~~qi~~aL~yLH~~~iiHrDiKp  144 (293)
T d1yhwa1          93 WVVMEYLAGGSLTDVVTETC-------MDEGQIAAVCRECLQALEFLHSNQVIHRDIKS  144 (293)
T ss_dssp             EEEEECCTTCBHHHHHHHSC-------CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSG
T ss_pred             EEEEEecCCCcHHHHhhccC-------CCHHHHHHHHHHHHHHHHHHHHCCCcccCCcH
Confidence            999999987 9999876532       89999999999999999999999999999997

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.91  E-value=1.9e-24  Score=211.85  Aligned_cols=128  Identities=22%  Similarity=0.192  Sum_probs=115.4

Q ss_pred             ceecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC----hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEE
Q 008813          410 TVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND----KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYF  485 (552)
Q Consensus       410 dvi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s----k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F  485 (552)
                      ..+.+||++.+.||+|+||.||+|+++.+++.||||+++..    ......+.+|+++|+.++|      ||||++++++
T Consensus         3 ~~l~drY~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~h------pniv~~~~~~   76 (277)
T d1o6ya_           3 SHLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNH------PAIVAVYDTG   76 (277)
T ss_dssp             SEETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCC------TTBCCEEEEE
T ss_pred             cCccceeEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCC------CCCCccccee
Confidence            35778999999999999999999999999999999999753    3345678999999999998      9999999999


Q ss_pred             EeCC----EEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          486 YHLE----HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       486 ~~~~----hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ...+    .+|||||||.| +|.+++...+.      +++.+++.|+.||+.||.|||++||||+|||+
T Consensus        77 ~~~~~~~~~~~lvmE~~~g~~L~~~~~~~~~------l~~~~~~~i~~qi~~al~~lH~~~iiHrDiKP  139 (277)
T d1o6ya_          77 EAETPAGPLPYIVMEYVDGVTLRDIVHTEGP------MTPKRAIEVIADACQALNFSHQNGIIHRDVKP  139 (277)
T ss_dssp             EEECSSSEEEEEEEECCCEEEHHHHHHHHCS------CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSG
T ss_pred             eeccCCCceEEEEEECCCCCEehhhhcccCC------CCHHHHHHHHHHHHHHHHHHHhCCccCccccC
Confidence            8654    48999999987 99999887653      89999999999999999999999999999997

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=8.1e-25  Score=220.10  Aligned_cols=126  Identities=17%  Similarity=0.153  Sum_probs=115.7

Q ss_pred             ecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC--hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCC
Q 008813          412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE  489 (552)
Q Consensus       412 i~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s--k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~  489 (552)
                      ..++|++++.||+|+||+||+|+++.+++.||||+++..  .....++.+|+.+|+.++|      ||||+++++|.+.+
T Consensus         4 ~~d~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~H------pnIv~l~~~~~~~~   77 (322)
T d1s9ja_           4 KDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNS------PYIVGFYGAFYSDG   77 (322)
T ss_dssp             CGGGEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCCCTTHHHHHHHHGGGGGGCCC------TTBCCEEEEEECSS
T ss_pred             CccCCEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhhCHHHHHHHHHHHHHHHhCCC------CCCCcEEEEEEECC
Confidence            456899999999999999999999999999999999764  3445788999999999998      99999999999999


Q ss_pred             EEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHh-CCCeeeeccc
Q 008813          490 HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFL-LLVIYFILFC  549 (552)
Q Consensus       490 hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs-~gIIH~~L~~  549 (552)
                      ++|||||||.+ +|.+++.+...      +++..++.|+.||+.||.|||+ +||||+|||+
T Consensus        78 ~~~iVmEy~~gg~L~~~l~~~~~------l~~~~~~~~~~qil~aL~yLH~~~~IiHRDiKP  133 (322)
T d1s9ja_          78 EISICMEHMDGGSLDQVLKKAGR------IPEQILGKVSIAVIKGLTYLREKHKIMHRDVKP  133 (322)
T ss_dssp             EEEEEEECCTTEEHHHHHHHHSS------CCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSG
T ss_pred             EEEEEEEcCCCCcHHHHHhhcCC------CCHHHHHHHHHHHHHHHHHHHHhCCEEccccCH
Confidence            99999999987 99999987653      9999999999999999999997 5999999997

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=1.7e-24  Score=215.56  Aligned_cols=125  Identities=24%  Similarity=0.287  Sum_probs=114.5

Q ss_pred             CceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC-hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEEE
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND-KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLF  492 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s-k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hLy  492 (552)
                      +.|++++.||+|+||+||+|+++.+++.||||+++.. ....+.+.+|+++|+.|+|      ||||+++++|...+.+|
T Consensus        12 d~Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~E~~il~~l~H------pnIv~l~~~~~~~~~~~   85 (288)
T d2jfla1          12 DFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDH------PNIVKLLDAFYYENNLW   85 (288)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSSSGGGGGTHHHHHHHHHCCC------TTBCCEEEEEEETTEEE
T ss_pred             cCeEEeEEEeeCCCcEEEEEEECCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCC------CCCCeEEEEEeeCCeEE
Confidence            5799999999999999999999999999999999764 3445778899999999998      99999999999999999


Q ss_pred             EEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          493 IVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       493 IVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ||||||.+ +|.+++.....     ++++..++.|+.||+.||.|||++||||+|||+
T Consensus        86 lvmEy~~~g~L~~~~~~~~~-----~l~e~~~~~i~~qi~~gL~ylH~~~ivHrDiKp  138 (288)
T d2jfla1          86 ILIEFCAGGAVDAVMLELER-----PLTESQIQVVCKQTLDALNYLHDNKIIHRDLKA  138 (288)
T ss_dssp             EEEECCTTEEHHHHHHHHTS-----CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSG
T ss_pred             EEEecCCCCcHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHHCCEEEeecCh
Confidence            99999987 99998876542     299999999999999999999999999999997

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.91  E-value=3.1e-24  Score=212.47  Aligned_cols=126  Identities=20%  Similarity=0.266  Sum_probs=114.6

Q ss_pred             cCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecCh----------hhHHHHHHHHHHHHHhcccCCCCCCCeeEeE
Q 008813          413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----------DFFDQSLDEIKLLKLVNKNDPADEHHILRLY  482 (552)
Q Consensus       413 ~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk----------~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~  482 (552)
                      .++|++.+.||+|+||+||+|+++.+++.||||++++..          ...+.+.+|+.+|++|+.|     ||||+++
T Consensus         2 ~~~y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h-----pnIv~~~   76 (277)
T d1phka_           2 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGH-----PNIIQLK   76 (277)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTC-----TTBCCEE
T ss_pred             cccCEEceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCC-----CCeEEEE
Confidence            478999999999999999999999999999999997641          2345688999999999843     9999999


Q ss_pred             eEEEeCCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          483 DYFYHLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       483 d~F~~~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ++|.+.+++|||||||.+ +|.++|+.+..      +++.+++.|+.||+.||.|||++||||+|||+
T Consensus        77 ~~~~~~~~~~ivmE~~~~g~L~~~l~~~~~------l~e~~~~~~~~qi~~al~~lH~~~ivHrDlkp  138 (277)
T d1phka_          77 DTYETNTFFFLVFDLMKKGELFDYLTEKVT------LSEKETRKIMRALLEVICALHKLNIVHRDLKP  138 (277)
T ss_dssp             EEEECSSEEEEEEECCTTCBHHHHHHHHSS------CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSG
T ss_pred             eecccCcceEEEEEcCCCchHHHHHHhcCC------CCHHHHHHHHHHHHHHHHHHHHcCCccccccc
Confidence            999999999999999986 99999987653      99999999999999999999999999999997

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=99.91  E-value=2e-24  Score=220.97  Aligned_cols=128  Identities=16%  Similarity=0.175  Sum_probs=115.8

Q ss_pred             eecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecCh-hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCC
Q 008813          411 VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK-DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE  489 (552)
Q Consensus       411 vi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk-~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~  489 (552)
                      .+.++|++++.||+|+||+||+|+++.+|+.||||++.... ...+.+.+|+++|+.|+|      ||||+++++|...+
T Consensus        23 ~il~~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~~~~~~~~~~E~~il~~l~H------pnIv~~~~~~~~~~   96 (350)
T d1koaa2          23 HVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRH------PTLVNLHDAFEDDN   96 (350)
T ss_dssp             CGGGTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCCSHHHHHHHHHHHHHHHHTCC------TTBCCEEEEEEETT
T ss_pred             CCccCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEcccchhhHHHHHHHHHHHHhCCC------CCCCcEEEEEEECC
Confidence            34578999999999999999999999999999999997652 334678899999999998      99999999999999


Q ss_pred             EEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          490 HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       490 hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ++|||||||.+ +|.+++.....     ++++..++.|+.||+.||.|||++||||+|||+
T Consensus        97 ~~~ivmE~~~gg~L~~~l~~~~~-----~l~e~~~~~i~~qi~~aL~ylH~~~iiHrDiKp  152 (350)
T d1koaa2          97 EMVMIYEFMSGGELFEKVADEHN-----KMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKP  152 (350)
T ss_dssp             EEEEEECCCCSCBHHHHHTCTTS-----CBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCG
T ss_pred             EEEEEEEcCCCCCHHHHHHhhcC-----CCCHHHHHHHHHHHHHHHHHHHhcCCeeeeech
Confidence            99999999987 99999865432     299999999999999999999999999999997

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=2.6e-24  Score=214.39  Aligned_cols=124  Identities=17%  Similarity=0.208  Sum_probs=114.5

Q ss_pred             CceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC----hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCC
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND----KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE  489 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s----k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~  489 (552)
                      ++|++++.||+|+||+||+|+++.+++.||||++++.    ....+.+.+|+++|++|+|      ||||+++++|...+
T Consensus         8 ~dy~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~H------pnIv~l~~~~~~~~   81 (288)
T d1uu3a_           8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH------PFFVKLYFTFQDDE   81 (288)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCS------TTBCCEEEEEECSS
T ss_pred             CCCEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCC------CCeeEEEEEEEECC
Confidence            5799999999999999999999999999999999753    2234678999999999998      99999999999999


Q ss_pred             EEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          490 HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       490 hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      .+|||||||.+ +|.+++...+.      +++..++.|+.||+.||.|||++||||+|||+
T Consensus        82 ~~~ivmEy~~gg~L~~~~~~~~~------l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp  136 (288)
T d1uu3a_          82 KLYFGLSYAKNGELLKYIRKIGS------FDETCTRFYTAEIVSALEYLHGKGIIHRDLKP  136 (288)
T ss_dssp             EEEEEECCCTTEEHHHHHHHHSS------CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSG
T ss_pred             EEEEEEEccCCCCHHHhhhccCC------CCHHHHHHHHHHHHHHHHhhccccEEcCcCCc
Confidence            99999999987 99999887654      99999999999999999999999999999997

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=2.2e-24  Score=213.81  Aligned_cols=126  Identities=26%  Similarity=0.320  Sum_probs=113.3

Q ss_pred             CceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecCh---hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCE
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH  490 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk---~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~h  490 (552)
                      ++|++++.||+|+||+||+|.++.+++.||||+++...   ...+++.+|+++|++++|      ||||+++++|.+.++
T Consensus         2 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~H------p~Iv~~~~~~~~~~~   75 (298)
T d1gz8a_           2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH------PNIVKLLDVIHTENK   75 (298)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTTCCC------TTBCCEEEEEEETTE
T ss_pred             CCCEeccEEecCcCeEEEEEEECCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCC------CcEEEeccccccccc
Confidence            57999999999999999999999999999999997542   245788999999999998      999999999999999


Q ss_pred             EEEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          491 LFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       491 LyIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      +||||||+.+++.+++......+    +++..++.|+.||+.||+|||++||||+|||+
T Consensus        76 ~~iv~e~~~~~~~~~~~~~~~~~----l~e~~~~~~~~qil~~L~yLH~~~IiHrDiKp  130 (298)
T d1gz8a_          76 LYLVFEFLHQDLKKFMDASALTG----IPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKP  130 (298)
T ss_dssp             EEEEEECCSEEHHHHHHHTTTTC----CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCG
T ss_pred             eeEEEeecCCchhhhhhhhcccC----CCHHHHHHHHHHHHHHHHHhhcCCEEccccCc
Confidence            99999999998888877655433    99999999999999999999999999999997

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.91  E-value=1.5e-24  Score=215.32  Aligned_cols=129  Identities=15%  Similarity=0.176  Sum_probs=117.8

Q ss_pred             eecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCE
Q 008813          411 VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH  490 (552)
Q Consensus       411 vi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~h  490 (552)
                      +..++|++.+.||+|+||+||+|+++.+++.||||+++......+++.+|+++|+.|+|      ||||+++++|...++
T Consensus        14 i~~~~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~E~~il~~l~H------pnIv~~~~~~~~~~~   87 (287)
T d1opja_          14 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH------PNLVQLLGVCTREPP   87 (287)
T ss_dssp             CCGGGEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTTCSCHHHHHHHHHHHHHCCC------TTBCCEEEEECSSSS
T ss_pred             ecHHHeEEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCccchHHHHHHHHHHHHhCCC------CCEecCCccEeeCCe
Confidence            33468999999999999999999999999999999998766566789999999999998      999999999999999


Q ss_pred             EEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          491 LFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       491 LyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      +|||||||.+ +|.+++.......    +++..++.|+.||+.||.|||++||||+|||+
T Consensus        88 ~~iv~E~~~~g~l~~~l~~~~~~~----~~~~~~~~i~~qi~~gL~yLH~~~iiHrDlKp  143 (287)
T d1opja_          88 FYIITEFMTYGNLLDYLRECNRQE----VSAVVLLYMATQISSAMEYLEKKNFIHRDLAA  143 (287)
T ss_dssp             CEEEEECCTTCBHHHHHHHSCTTT----SCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSG
T ss_pred             eEEEeecccCcchHHHhhhccccc----hHHHHHHHHHHHHHHHHHHHHHCCcccCcccc
Confidence            9999999986 9999998754433    89999999999999999999999999999997

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=99.91  E-value=2.4e-24  Score=220.51  Aligned_cols=127  Identities=17%  Similarity=0.142  Sum_probs=114.7

Q ss_pred             ecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecCh-hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCE
Q 008813          412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK-DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH  490 (552)
Q Consensus       412 i~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk-~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~h  490 (552)
                      +.++|++++.||+|+||+||+|+++.+++.||||+++... .....+.+|+++|+.|+|      ||||+++++|...++
T Consensus        27 ~~d~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~H------pnIv~~~~~~~~~~~  100 (352)
T d1koba_          27 VYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHH------PKLINLHDAFEDKYE  100 (352)
T ss_dssp             GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCS------TTBCCEEEEEECSSE
T ss_pred             cccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCcchhHHHHHHHHHHHHHhCCC------CCCCcEEEEEEECCE
Confidence            3468999999999999999999999999999999998653 234577899999999998      999999999999999


Q ss_pred             EEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          491 LFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       491 LyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      +|||||||.+ +|.+++.....     +|++.+++.|+.||+.||.|||++||||+|||+
T Consensus       101 ~~ivmE~~~gg~L~~~~~~~~~-----~l~e~~~~~i~~qi~~aL~ylH~~~iiHRDiKp  155 (352)
T d1koba_         101 MVLILEFLSGGELFDRIAAEDY-----KMSEAEVINYMRQACEGLKHMHEHSIVHLDIKP  155 (352)
T ss_dssp             EEEEEECCCCCBHHHHTTCTTC-----CBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCG
T ss_pred             EEEEEEcCCCChHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHHCCeeeccccc
Confidence            9999999987 99998765442     299999999999999999999999999999996

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=2.4e-24  Score=217.25  Aligned_cols=135  Identities=22%  Similarity=0.255  Sum_probs=112.9

Q ss_pred             CCcceeeCce---ecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC---hhhHHHHHHHHHHHHHhcccCCCCC
Q 008813          402 KDLPIILNTV---IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADE  475 (552)
Q Consensus       402 ~~y~v~~gdv---i~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s---k~~~~~~lrEIkILk~L~hhd~~d~  475 (552)
                      ++|+..++..   +.+||+++++||+|+||+||+|.++.+++.||||++++.   ....+.+.+|+++|+.++|      
T Consensus         3 ~~~~~~~~~~~~~~~~~Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h------   76 (346)
T d1cm8a_           3 GFYRQEVTKTAWEVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRH------   76 (346)
T ss_dssp             SBCCEECSSSEECCBSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCB------
T ss_pred             CcEEEeccCceeecCCcEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcCC------
Confidence            3455555554   678999999999999999999999999999999999753   3456788999999999998      


Q ss_pred             CCeeEeEeEEEeCC------EEEEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          476 HHILRLYDYFYHLE------HLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       476 pnIVrL~d~F~~~~------hLyIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ||||+++++|...+      ++|||||||+.+|..+++...       |++..++.|++||+.||.|||++||||+|||+
T Consensus        77 pniv~l~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~-------l~~~~~~~~~~qi~~aL~~LH~~~IiHrDiKp  149 (346)
T d1cm8a_          77 ENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEK-------LGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKP  149 (346)
T ss_dssp             TTBCCCSEEECSCSSTTTCCCCEEEEECCSEEHHHHHHHCC-------CCHHHHHHHHHHHHHHHHHHHHTTEECCCCCG
T ss_pred             CCeeEEEEEeccCccccccceEEEEEecccccHHHHHHhcc-------ccHHHHHHHHHHHHHHHHHHHhCCCcccccCc
Confidence            99999999998664      589999999879988877532       99999999999999999999999999999997

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.90  E-value=3.7e-24  Score=215.27  Aligned_cols=125  Identities=11%  Similarity=0.140  Sum_probs=111.1

Q ss_pred             cCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC----hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeC
Q 008813          413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND----KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL  488 (552)
Q Consensus       413 ~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s----k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~  488 (552)
                      ..+|++++.||+|+||+||+|+++.+++.||||+++..    ....+.+.+|+++|+.|+|      ||||+++++|...
T Consensus        14 ~~~y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~H------pnIv~~~~~~~~~   87 (309)
T d1u5ra_          14 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRH------PNTIQYRGCYLRE   87 (309)
T ss_dssp             HHHEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCC------TTBCCEEEEEEET
T ss_pred             HHhcEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCC------CCEeeEEEEEEEC
Confidence            45799999999999999999999999999999999764    2234678899999999998      9999999999999


Q ss_pred             CEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          489 EHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       489 ~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      +++|||||||.+ +|..++..++      ++++..++.|++||+.||.|||++||||+|||+
T Consensus        88 ~~~~iv~E~~~~g~l~~~~~~~~------~l~e~~~~~i~~qi~~aL~yLH~~~iiHrDiKp  143 (309)
T d1u5ra_          88 HTAWLVMEYCLGSASDLLEVHKK------PLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKA  143 (309)
T ss_dssp             TEEEEEEECCSEEHHHHHHHHTS------CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSG
T ss_pred             CEEEEEEEecCCCchHHHHHhCC------CCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCc
Confidence            999999999988 5655544433      299999999999999999999999999999997

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=5.5e-24  Score=216.83  Aligned_cols=124  Identities=20%  Similarity=0.263  Sum_probs=115.0

Q ss_pred             CceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC----hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCC
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND----KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE  489 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s----k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~  489 (552)
                      +.|++++.||+|+||+||+|+++.+++.||||++++.    ....+++.+|+++|+.++|      ||||+++++|.+.+
T Consensus         5 ~dy~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~h------p~Iv~l~~~~~~~~   78 (337)
T d1o6la_           5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH------PFLTALKYAFQTHD   78 (337)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCC------TTBCCEEEEEECSS
T ss_pred             HhcEEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCC------CCEEEEEeeecccc
Confidence            5699999999999999999999999999999999864    2345778999999999998      99999999999999


Q ss_pred             EEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          490 HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       490 hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ++|||||||.+ +|.++++..+.      +++..++.|++||+.||.|||++||||+|||+
T Consensus        79 ~~~iv~ey~~gg~L~~~~~~~~~------~~e~~~~~~~~qil~al~ylH~~~iiHRDlKP  133 (337)
T d1o6la_          79 RLCFVMEYANGGELFFHLSRERV------FTEERARFYGAEIVSALEYLHSRDVVYRDIKL  133 (337)
T ss_dssp             EEEEEEECCTTCBHHHHHHHHSC------CCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCG
T ss_pred             ccccceeccCCCchhhhhhcccC------CcHHHHHHHHHHHhhhhhhhhhcCccccccCH
Confidence            99999999987 99999987654      89999999999999999999999999999997

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=5.4e-24  Score=216.23  Aligned_cols=136  Identities=21%  Similarity=0.230  Sum_probs=117.8

Q ss_pred             CCCcceeeCce---ecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC---hhhHHHHHHHHHHHHHhcccCCCC
Q 008813          401 NKDLPIILNTV---IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPAD  474 (552)
Q Consensus       401 ~~~y~v~~gdv---i~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s---k~~~~~~lrEIkILk~L~hhd~~d  474 (552)
                      +.+|++.+|+.   +.+||+++++||+|+||+||+|+++.+++.||||++++.   ......+.+|+.+|+.++|     
T Consensus         1 ~~~~~~~~~~~~f~i~~~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~h-----   75 (355)
T d2b1pa1           1 NQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH-----   75 (355)
T ss_dssp             CCEEEEEETTEEEEEETTEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCC-----
T ss_pred             CCCEEEEeCCcceeecCCeEEEEEeecCcCeEEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcCC-----
Confidence            35688999994   458999999999999999999999999999999999864   3445678899999999998     


Q ss_pred             CCCeeEeEeEEEeC------CEEEEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecc
Q 008813          475 EHHILRLYDYFYHL------EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILF  548 (552)
Q Consensus       475 ~pnIVrL~d~F~~~------~hLyIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~  548 (552)
                       ||||+++++|...      .++|||||||.++|.+.+..        .+++..++.+++||+.||.|||++||||+|||
T Consensus        76 -pnIv~~~~~f~~~~~~~~~~~~~iv~Ey~~~~l~~~~~~--------~~~~~~i~~~~~qil~gl~~LH~~giiHrDlK  146 (355)
T d2b1pa1          76 -KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQM--------ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLK  146 (355)
T ss_dssp             -TTBCCCSEEECSCCSTTTCCEEEEEEECCSEEHHHHHTS--------CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCC
T ss_pred             -CCeeEEEEEEecccccccCceeEEEEeccchHHHHhhhc--------CCCHHHHHHHHHHHHHHHHHhhhcccccccCC
Confidence             9999999999643      78999999999988776632        18999999999999999999999999999999


Q ss_pred             cc
Q 008813          549 CF  550 (552)
Q Consensus       549 ~~  550 (552)
                      +-
T Consensus       147 P~  148 (355)
T d2b1pa1         147 PS  148 (355)
T ss_dssp             GG
T ss_pred             cc
Confidence            73

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=1e-23  Score=208.11  Aligned_cols=127  Identities=22%  Similarity=0.311  Sum_probs=112.5

Q ss_pred             eecCce-EEEEEeccCCceEEEEEEECCCCcEEEEEEEecC---hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEE
Q 008813          411 VIAGRY-YVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFY  486 (552)
Q Consensus       411 vi~~RY-~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s---k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~  486 (552)
                      ...+|| ++.++||+|+||+||+|++..+++.||||++...   ....+.+.+|+++|++|+|      ||||+++++|.
T Consensus         5 ~~~gry~~~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~H------pnIv~~~~~~~   78 (270)
T d1t4ha_           5 SNDGRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQH------PNIVRFYDSWE   78 (270)
T ss_dssp             CTTSCEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCC------TTBCCEEEEEE
T ss_pred             CCCCCEEEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCC------CCeeeEEEEEe
Confidence            445677 6777899999999999999999999999999764   3345678899999999998      99999999997


Q ss_pred             e----CCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCC--Ceeeeccc
Q 008813          487 H----LEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLL--VIYFILFC  549 (552)
Q Consensus       487 ~----~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~g--IIH~~L~~  549 (552)
                      .    ...+|||||||.+ +|.++++....      +++..++.|+.||+.||+|||+++  |||+|||+
T Consensus        79 ~~~~~~~~~~ivmE~~~~g~L~~~l~~~~~------~~~~~~~~~~~qi~~gl~yLH~~~~~IiHrDiKp  142 (270)
T d1t4ha_          79 STVKGKKCIVLVTELMTSGTLKTYLKRFKV------MKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKC  142 (270)
T ss_dssp             EESSSCEEEEEEEECCCSCBHHHHHHHHSS------CCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCG
T ss_pred             eccccCCEEEEEEeCCCCCcHHHHHhcccc------ccHHHHHHHHHHHHHHHHHHHHCCCCEEeCCcCh
Confidence            5    3579999999987 99999987653      899999999999999999999999  99999997

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.89  E-value=2.2e-23  Score=209.93  Aligned_cols=124  Identities=19%  Similarity=0.338  Sum_probs=113.7

Q ss_pred             CceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC----hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCC
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND----KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE  489 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s----k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~  489 (552)
                      +.|++++.||+|+||+||+|+++.+++.||||++++.    ....+.+.+|+.+|+.++|      ||||+++++|...+
T Consensus         4 ~dy~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~H------pnIv~~~~~~~~~~   77 (316)
T d1fota_           4 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTH------PFIIRMWGTFQDAQ   77 (316)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCB------TTBCCEEEEEECSS
T ss_pred             hHeEEEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccC------cChhheeeeEeeCC
Confidence            4699999999999999999999999999999999753    2235678899999999998      99999999999999


Q ss_pred             EEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          490 HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       490 hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ++|||||||.| +|..++.....      +++..++.|+.||+.||.|||++||||+|||+
T Consensus        78 ~~~ivmE~~~gg~l~~~~~~~~~------~~~~~~~~~~~qi~~al~~lH~~~iiHrDiKp  132 (316)
T d1fota_          78 QIFMIMDYIEGGELFSLLRKSQR------FPNPVAKFYAAEVCLALEYLHSKDIIYRDLKP  132 (316)
T ss_dssp             EEEEEECCCCSCBHHHHHHHTSS------CCHHHHHHHHHHHHHHHHHHHTTTEECCCCCG
T ss_pred             eeeeEeeecCCcccccccccccc------ccccHHHHHHHHHHHhhhhhccCcEEccccCc
Confidence            99999999987 89888887654      89999999999999999999999999999997

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=2.2e-23  Score=211.55  Aligned_cols=126  Identities=21%  Similarity=0.199  Sum_probs=109.7

Q ss_pred             eecCceEEEE-EeccCCceEEEEEEECCCCcEEEEEEEecChhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEe--
Q 008813          411 VIAGRYYVTE-YLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH--  487 (552)
Q Consensus       411 vi~~RY~Ile-~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~--  487 (552)
                      .+.++|+++. .||+|+||+||+|+++.+++.||||+++..    ..+.+|+.++.++.+|     ||||+++++|.+  
T Consensus         8 ~i~~~y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~----~~~~~E~~~~~~~~~h-----pnIv~l~~~~~~~~   78 (335)
T d2ozaa1           8 AIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC----PKARREVELHWRASQC-----PHIVRIVDVYENLY   78 (335)
T ss_dssp             CGGGTEEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECS----HHHHHHHHHHHHHTTS-----TTBCCEEEEEEEEE
T ss_pred             CcccCEEEeeEEeeeccCeEEEEEEECCCCCEEEEEEECCc----HHHHHHHHHHHHhcCC-----CCCCeEEEEEeecc
Confidence            3456899875 599999999999999999999999999864    4567899998776433     999999999976  


Q ss_pred             --CCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          488 --LEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       488 --~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                        ..++|||||||.| +|.++|+.+...    +|++.+++.|+.||+.||.|||++||||+|||+
T Consensus        79 ~~~~~~~ivmEy~~gg~L~~~i~~~~~~----~l~e~~~~~i~~qi~~al~ylH~~~iiHRDiKp  139 (335)
T d2ozaa1          79 AGRKCLLIVMECLDGGELFSRIQDRGDQ----AFTEREASEIMKSIGEAIQYLHSINIAHRDVKP  139 (335)
T ss_dssp             TTEEEEEEEEECCCSEEHHHHHHSCSCC----CEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSG
T ss_pred             cCCCEEEEEEECCCCCcHHHHHHhcCCC----CcCHHHHHHHHHHHHHHHHHHHHcCCccccccc
Confidence              4679999999986 999999875433    299999999999999999999999999999997

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=2.8e-23  Score=202.62  Aligned_cols=124  Identities=25%  Similarity=0.219  Sum_probs=112.6

Q ss_pred             CceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC---hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCE
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH  490 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s---k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~h  490 (552)
                      +||++++.||+|+||+||+|+++.+++.||||+++..   .....++.+|+.+|+.++|      ||||+++++|....+
T Consensus         2 ~ry~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h------~niv~~~~~~~~~~~   75 (292)
T d1unla_           2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKH------KNIVRLHDVLHSDKK   75 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCC------TTBCCEEEEEECSSE
T ss_pred             CCCEeeeEEecCcCeEEEEEEECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcCc------CCEEeeccccccccc
Confidence            5899999999999999999999999999999999754   3356788999999999998      999999999999999


Q ss_pred             EEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          491 LFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       491 LyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ++||||++.+ .|..+++..+.      +++..++.++.|++.||+|||++||||+|||+
T Consensus        76 ~~iv~~~~~~~~l~~~~~~~~~------~~~~~~~~~~~q~~~aL~~lH~~~IvHrDiKP  129 (292)
T d1unla_          76 LTLVFEFCDQDLKKYFDSCNGD------LDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKP  129 (292)
T ss_dssp             EEEEEECCSEEHHHHHHHTTTC------CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSG
T ss_pred             eeEEeeeccccccccccccccc------cchhHHHHHHHHHHHHHHHhhcCCEeeecccC
Confidence            9999999988 66666655432      89999999999999999999999999999997

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=1.7e-23  Score=206.12  Aligned_cols=128  Identities=18%  Similarity=0.158  Sum_probs=105.9

Q ss_pred             CceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC---hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEe--C
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH--L  488 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s---k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~--~  488 (552)
                      +.|++++.||+|+||+||+|+++.+++.||||+++..   +...+.+.+|+++|++++|      ||||++++++..  .
T Consensus         4 edy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~H------pnIv~~~~~~~~~~~   77 (269)
T d2java1           4 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKH------PNIVRYYDRIIDRTN   77 (269)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCC------TTBCCEEEEEEC---
T ss_pred             hhCEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCCC------CCEeeEEEEEEeCCC
Confidence            5699999999999999999999999999999999764   3345678899999999998      999999999965  4


Q ss_pred             CEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCC-----Ceeeeccc
Q 008813          489 EHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLL-----VIYFILFC  549 (552)
Q Consensus       489 ~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~g-----IIH~~L~~  549 (552)
                      +.+|||||||.+ +|.+++......+  .++++..++.|+.||+.||.|||+++     |||+|||+
T Consensus        78 ~~~~ivmEy~~~g~L~~~i~~~~~~~--~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp  142 (269)
T d2java1          78 TTLYIVMEYCEGGDLASVITKGTKER--QYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKP  142 (269)
T ss_dssp             -CEEEEEECCTTEEHHHHHHHHHHHT--CCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCG
T ss_pred             CEEEEEEecCCCCcHHHHHHhccccC--CCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCch
Confidence            679999999987 9999987543211  23999999999999999999999876     99999997

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=4.5e-23  Score=208.03  Aligned_cols=125  Identities=22%  Similarity=0.289  Sum_probs=112.0

Q ss_pred             CceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC----hhhHHHHHHHHHHHH-HhcccCCCCCCCeeEeEeEEEeC
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND----KDFFDQSLDEIKLLK-LVNKNDPADEHHILRLYDYFYHL  488 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s----k~~~~~~lrEIkILk-~L~hhd~~d~pnIVrL~d~F~~~  488 (552)
                      ++|++++.||+|+||+||+|+++.+++.||||++++.    ....+.+.+|+.++. .++|      ||||+++++|...
T Consensus         2 ddy~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~h------p~Iv~~~~~~~~~   75 (320)
T d1xjda_           2 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEH------PFLTHMFCTFQTK   75 (320)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTC------TTBCCEEEEEECS
T ss_pred             CCeEEeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCC------CcEEEEEEEEccC
Confidence            5799999999999999999999999999999999753    223456778888776 4677      9999999999999


Q ss_pred             CEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          489 EHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       489 ~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      +++|||||||.+ +|.++++.+..      +++.+++.|+.||+.||.|||++||||+|||+-
T Consensus        76 ~~~yivmEy~~~g~L~~~i~~~~~------~~e~~~~~~~~qi~~al~ylH~~~iiHrDikp~  132 (320)
T d1xjda_          76 ENLFFVMEYLNGGDLMYHIQSCHK------FDLSRATFYAAEIILGLQFLHSKGIVYRDLKLD  132 (320)
T ss_dssp             SEEEEEEECCTTCBHHHHHHHHSS------CCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGG
T ss_pred             CceeEEEeecCCCcHHHHhhccCC------CCHHHHHHHHHHHHHHHHHHHhCCeeeccCccc
Confidence            999999999987 99999987654      899999999999999999999999999999973

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.89  E-value=3.6e-23  Score=211.39  Aligned_cols=124  Identities=18%  Similarity=0.298  Sum_probs=114.3

Q ss_pred             CceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC----hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCC
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND----KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE  489 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s----k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~  489 (552)
                      ++|++++.||+|+||+||+|+++.+++.||||++.+.    ....+.+.+|+++|+.++|      ||||+++++|...+
T Consensus        41 d~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~h------pnIv~~~~~~~~~~  114 (350)
T d1rdqe_          41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF------PFLVKLEFSFKDNS  114 (350)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCC------TTBCCEEEEEECSS
T ss_pred             cCeEEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCC------CcEeeccccccccc
Confidence            6899999999999999999999999999999999753    2234678899999999998      99999999999999


Q ss_pred             EEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          490 HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       490 hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      .+++||||+.+ +|.+++...+.      +++..++.|+.||+.||.|||++||||+|||+
T Consensus       115 ~~~~v~e~~~~g~l~~~l~~~~~------l~e~~~~~i~~qi~~aL~yLH~~~iiHRDIKP  169 (350)
T d1rdqe_         115 NLYMVMEYVAGGEMFSHLRRIGR------FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKP  169 (350)
T ss_dssp             EEEEEEECCTTCBHHHHHHHHCC------CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSG
T ss_pred             ccccccccccccchhhhHhhcCC------CCHHHHHHHHHHHHHHHHHHHhCCEecCcCCH
Confidence            99999999887 99999987653      99999999999999999999999999999997

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=99.89  E-value=1.8e-23  Score=209.03  Aligned_cols=120  Identities=20%  Similarity=0.209  Sum_probs=107.1

Q ss_pred             CceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeC--CEE
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL--EHL  491 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~--~hL  491 (552)
                      ++|+++++||+|+||+||+|+++.+++.||||+++...  .+.+.+|+.+|+.+++|     |||++++++|...  .++
T Consensus        35 d~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~~--~~~~~~Ei~il~~l~~h-----pnIv~~~~~~~~~~~~~~  107 (328)
T d3bqca1          35 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK--KKKIKREIKILENLRGG-----PNIITLADIVKDPVSRTP  107 (328)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSSC--HHHHHHHHHHHHHHTTS-----TTBCCEEEEEECTTTCSE
T ss_pred             cCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEECHHH--HHHHHHHHHHHHhccCC-----CCCcEEEEEEEecCCCce
Confidence            58999999999999999999999999999999998643  46788999999999744     9999999999854  579


Q ss_pred             EEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          492 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       492 yIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ++|||||.+ +|..+.+         .+++..++.|++||+.||.|||++||||+|||+
T Consensus       108 ~~v~e~~~~~~L~~~~~---------~l~e~~i~~i~~qil~aL~~LH~~gIvHrDiKp  157 (328)
T d3bqca1         108 ALVFEHVNNTDFKQLYQ---------TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKP  157 (328)
T ss_dssp             EEEEECCCSCBGGGTTT---------SCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSG
T ss_pred             eEEEeecCCCcHHHHhc---------CCCHHHHHHHHHHHHHHHHHHhhcccccccccc
Confidence            999999997 7765422         189999999999999999999999999999996

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=3e-23  Score=203.73  Aligned_cols=128  Identities=19%  Similarity=0.214  Sum_probs=112.7

Q ss_pred             ecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChh-------hHHHHHHHHHHHHHhcccCCCCCCCeeEeEeE
Q 008813          412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD-------FFDQSLDEIKLLKLVNKNDPADEHHILRLYDY  484 (552)
Q Consensus       412 i~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~-------~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~  484 (552)
                      +.+||++.+.||+|+||+||+|+++.+++.||||++++...       ...++.+|+.+|+++++    .+||||+++++
T Consensus         2 l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~----~h~nIv~~~~~   77 (273)
T d1xwsa_           2 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS----GFSGVIRLLDW   77 (273)
T ss_dssp             CTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCS----SSCSBCCEEEE
T ss_pred             CCCeEEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhcc----CCCCccEEEEE
Confidence            46799999999999999999999999999999999975321       12346789999999984    12999999999


Q ss_pred             EEeCCEEEEEEecCCC--CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          485 FYHLEHLFIVCELLRA--NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       485 F~~~~hLyIVmEll~G--sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      |...+.+|+|||++.+  +|.++++.+..      +++.+++.|+.||+.||.|||++||||+|||+
T Consensus        78 ~~~~~~~~lv~e~~~~~~~l~~~~~~~~~------l~e~~~~~~~~qi~~al~~lH~~~iiHrDiKp  138 (273)
T d1xwsa_          78 FERPDSFVLILERPEPVQDLFDFITERGA------LQEELARSFFWQVLEAVRHCHNCGVLHRDIKD  138 (273)
T ss_dssp             EECSSEEEEEEECCSSEEEHHHHHHHHCS------CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSG
T ss_pred             EeeCCeEEEEEEeccCcchHHHHHhccCC------CCHHHHHHHHHHHHHHHHHHHHCCCccccCcc
Confidence            9999999999999875  78888887653      99999999999999999999999999999997

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=99.88  E-value=4.4e-23  Score=202.35  Aligned_cols=124  Identities=22%  Similarity=0.239  Sum_probs=110.8

Q ss_pred             CceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC---hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCE
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH  490 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s---k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~h  490 (552)
                      +||+++++||+|+||+||+|+++ +++.||||+++..   ....+.+.+|+.+|++++|      ||||+++++|...++
T Consensus         2 ~~Y~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h------pnIv~~~~~~~~~~~   74 (286)
T d1ob3a_           2 EKYHGLEKIGEGTYGVVYKAQNN-YGETFALKKIRLEKEDEGIPSTTIREISILKELKH------SNIVKLYDVIHTKKR   74 (286)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEET-TSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCC------TTBCCEEEEEECSSC
T ss_pred             CCceeccEEecCCCcEEEEEEeC-CCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCC------CcEEeeeeecccCCc
Confidence            58999999999999999999986 7899999999764   2235788999999999998      999999999999999


Q ss_pred             EEEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          491 LFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       491 LyIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      +||+||++.+.+...+.....     .+++..++.|++||+.||+|||+++|||+|||+
T Consensus        75 ~~i~~e~~~~~~~~~~~~~~~-----~l~~~~~~~i~~qi~~~L~~LH~~~IvHrDiKp  128 (286)
T d1ob3a_          75 LVLVFEHLDQDLKKLLDVCEG-----GLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKP  128 (286)
T ss_dssp             EEEEEECCSEEHHHHHHTSTT-----CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCG
T ss_pred             eeEEEEeehhhhHHHHHhhcC-----CcchhhhHHHHHHHHHHHHHhccCcEEecCCCC
Confidence            999999999976666655432     299999999999999999999999999999997

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=5.9e-23  Score=200.58  Aligned_cols=124  Identities=15%  Similarity=0.163  Sum_probs=112.6

Q ss_pred             CceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEEEE
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFI  493 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hLyI  493 (552)
                      .+|++++.||+|+||.||+|+++ +++.||||+++......+.+.+|++++++++|      ||||++++++...+.+||
T Consensus         5 ~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~i~~~~~~~~~~~~E~~~l~~l~H------pnIv~~~g~~~~~~~~~l   77 (263)
T d1sm2a_           5 SELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAMSEEDFIEEAEVMMKLSH------PKLVQLYGVCLEQAPICL   77 (263)
T ss_dssp             SCEEEEEEEECCSSCCEEEEEET-TTEEEEEEECCSSSSCHHHHHHHHHHHHHCCC------TTBCCEEEEECSSSSCEE
T ss_pred             HHcEEEEEEeeCCCeEEEEEEEC-CCCEEEEEEECCCcCcHHHHHHHHHHHHhcCC------CCcccccceeccCCceEE
Confidence            57999999999999999999986 56789999998765556789999999999998      999999999999999999


Q ss_pred             EEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          494 VCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       494 VmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      |||||.+ +|.+++.....     .+++..+..|+.||+.||.|||+++|||+|||+
T Consensus        78 v~E~~~~g~L~~~l~~~~~-----~~~~~~~~~i~~qia~gl~~lH~~~iiHrDlKp  129 (263)
T d1sm2a_          78 VFEFMEHGCLSDYLRTQRG-----LFAAETLLGMCLDVCEGMAYLEEACVIHRDLAA  129 (263)
T ss_dssp             EEECCTTCBHHHHHHTTTT-----CCCHHHHHHHHHHHHHHHHHHHHTTCCCTTCSG
T ss_pred             EEEecCCCcHHHHhhcccc-----CCCHHHHHHHHHHHHHHHHhhhccceeecccch
Confidence            9999986 99999886543     289999999999999999999999999999997

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.88  E-value=1.2e-22  Score=201.30  Aligned_cols=129  Identities=20%  Similarity=0.271  Sum_probs=116.8

Q ss_pred             ceecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCC
Q 008813          410 TVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE  489 (552)
Q Consensus       410 dvi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~  489 (552)
                      +++.+||++++.||+|+||+||+|++..+++.||||+++.... ...+.+|+++++.|.|+     +||+.+++++....
T Consensus         1 ~vig~~Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~-~~~~~~e~~~~~~l~~~-----~~i~~~~~~~~~~~   74 (293)
T d1csna_           1 NVVGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD-APQLRDEYRTYKLLAGC-----TGIPNVYYFGQEGL   74 (293)
T ss_dssp             CEETTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTT-SCCHHHHHHHHHHTTTC-----TTCCCEEEEEEETT
T ss_pred             CCCCCceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEccccC-cHHHHHHHHHHHHhcCC-----CCCCEEEEEeecCC
Confidence            3677899999999999999999999999999999999876432 34578899999999986     89999999999999


Q ss_pred             EEEEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          490 HLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       490 hLyIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      +.|+||||++++|.++++.....     +++..+..|+.|++.||.|||++||||+|||+
T Consensus        75 ~~~~vme~~~~~l~~~~~~~~~~-----~~~~~~~~i~~q~~~~l~~lH~~giiHrDiKp  129 (293)
T d1csna_          75 HNVLVIDLLGPSLEDLLDLCGRK-----FSVKTVAMAAKQMLARVQSIHEKSLVYRDIKP  129 (293)
T ss_dssp             EEEEEEECCCCBHHHHHHHTTTC-----CCHHHHHHHHHHHHHHHHHHHTTTEECCCCCG
T ss_pred             ccEEEEEecCCCHHHHHHhhccc-----hhhHHHHHHHHHHHHHHHHHHHCCceeccCCc
Confidence            99999999999999998875532     89999999999999999999999999999997

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=6e-23  Score=207.65  Aligned_cols=125  Identities=24%  Similarity=0.305  Sum_probs=108.7

Q ss_pred             ecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC--hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeC-
Q 008813          412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL-  488 (552)
Q Consensus       412 i~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s--k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~-  488 (552)
                      +..||+++++||+|+||+||+|+++.+++.||||+++..  ....+++.+|+.+|+.|+|      ||||++++++... 
T Consensus         6 i~~rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~h------p~iv~~~~~~~~~~   79 (345)
T d1pmea_           6 VGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRH------ENIIGINDIIRAPT   79 (345)
T ss_dssp             CCTTEEEEEECC---CCCEEEEEETTTCSEEEEEEECCTTCHHHHHHHHHHHHHHHHCCC------TTBCCCCEEECCSS
T ss_pred             cCCCeEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehhcChHHHHHHHHHHHHHHHcCC------CCCCcEEEEEeecc
Confidence            347999999999999999999999999999999999753  3456788999999999998      9999999998754 


Q ss_pred             ----CEEEEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          489 ----EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       489 ----~hLyIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                          .++||+|++++++|.++++...       +++..++.|+.||+.||+|||++||||+|||+
T Consensus        80 ~~~~~~~~l~~~~~~g~L~~~l~~~~-------l~~~~i~~i~~qil~al~yLH~~~iiHRDIKp  137 (345)
T d1pmea_          80 IEQMKDVYLVTHLMGADLYKLLKTQH-------LSNDHICYFLYQILRGLKYIHSANVLHRDLKP  137 (345)
T ss_dssp             TTTCCCEEEEEECCCEEHHHHHHHCC-------CCHHHHHHHHHHHHHHHHHHHHTTEECCCCCG
T ss_pred             ccccceEEEEEeecCCchhhhhhcCC-------CCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCc
Confidence                3578888888779999997642       89999999999999999999999999999997

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=5.6e-23  Score=206.32  Aligned_cols=124  Identities=25%  Similarity=0.296  Sum_probs=108.5

Q ss_pred             cCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC---hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeC-
Q 008813          413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL-  488 (552)
Q Consensus       413 ~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s---k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~-  488 (552)
                      .+||++++.||+|+||+||+|+++.+++.||||++++.   ....+++.+|+.+|+.|+|      +|||+++++|... 
T Consensus        17 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h------~~iv~~~~~~~~~~   90 (348)
T d2gfsa1          17 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH------ENVIGLLDVFTPAR   90 (348)
T ss_dssp             ETTEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCC------TTBCCCSEEECSCS
T ss_pred             CCCeEEEEEEecCCCeEEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHhcCC------CCeeeEEEEEeecc
Confidence            47999999999999999999999999999999999764   2344678899999999998      9999999999643 


Q ss_pred             -----CEEEEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          489 -----EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       489 -----~hLyIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                           .+++++|++++++|.++++.++       +++..++.|++||+.||.|||++||||+|||+
T Consensus        91 ~~~~~~~~~i~~~~~gg~L~~~~~~~~-------l~e~~~~~i~~qil~aL~~LH~~giiHrDiKp  149 (348)
T d2gfsa1          91 SLEEFNDVYLVTHLMGADLNNIVKCQK-------LTDDHVQFLIYQILRGLKYIHSADIIHRDLKP  149 (348)
T ss_dssp             STTTCCCCEEEEECCSEEHHHHHTTCC-------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCG
T ss_pred             ccccCceEEEEEeecCCchhhhccccc-------ccHHHHHHHHHHHHHHHHHHHhCCCcccccCC
Confidence                 3466666666669999986432       99999999999999999999999999999997

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=2.8e-23  Score=205.32  Aligned_cols=121  Identities=25%  Similarity=0.300  Sum_probs=103.8

Q ss_pred             EEEEeccCCceEEEEEEECCCCcEEEEEEEecChh------hHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEE
Q 008813          418 VTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD------FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL  491 (552)
Q Consensus       418 Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~------~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hL  491 (552)
                      .+++||+|+||+||+|+++.+++.||||+++....      ..+.+.+|+.+|+.++|      ||||+++++|...+++
T Consensus         2 ~l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~h------pnIv~~~~~~~~~~~~   75 (299)
T d1ua2a_           2 KLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSH------PNIIGLLDAFGHKSNI   75 (299)
T ss_dssp             EEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCC------TTBCCEEEEECCTTCC
T ss_pred             cceEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCC------CCEeEEEeeeccCCce
Confidence            46899999999999999999999999999975421      23468899999999998      9999999999999999


Q ss_pred             EEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          492 FIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       492 yIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ||||||+.+++...+.....     .+++..++.|++||+.||.|||++||||+|||+
T Consensus        76 ~ivmE~~~~~~~~~~~~~~~-----~l~~~~~~~~~~qil~aL~~lH~~~iiHrDiKp  128 (299)
T d1ua2a_          76 SLVFDFMETDLEVIIKDNSL-----VLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKP  128 (299)
T ss_dssp             EEEEECCSEEHHHHHTTCCS-----SCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCG
T ss_pred             eehhhhhcchHHhhhhhccc-----CCCHHHHHHHHHHHHHHHHHhhccceecccCCc
Confidence            99999999966555544332     289999999999999999999999999999997

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=7.8e-23  Score=200.90  Aligned_cols=127  Identities=22%  Similarity=0.237  Sum_probs=111.1

Q ss_pred             eecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCE
Q 008813          411 VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH  490 (552)
Q Consensus       411 vi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~h  490 (552)
                      +..++|++++.||+|+||.||+|.++ +++.||||+++......+.+.+|+.+|++++|      ||||++++++. .+.
T Consensus        10 i~~~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~H------pnIv~~~g~~~-~~~   81 (272)
T d1qpca_          10 VPRETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQGSMSPDAFLAEANLMKQLQH------QRLVRLYAVVT-QEP   81 (272)
T ss_dssp             CCGGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTSSCHHHHHHHHHHHHHCCC------TTBCCEEEEEC-SSS
T ss_pred             cCHHHeEEeEEEecCCCcEEEEEEEC-CCCEEEEEEEccCcCCHHHHHHHHHHHHhCCC------CCEeEEEeeec-cCC
Confidence            34568999999999999999999975 57889999998765556789999999999998      99999999775 566


Q ss_pred             EEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          491 LFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       491 LyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      +|||||||.+ +|.+++.......    +++..++.|+.||+.||.|||+++|||+|||+
T Consensus        82 ~~iv~Ey~~~g~L~~~~~~~~~~~----l~~~~~~~i~~qi~~gl~~lH~~~ivHrDiKp  137 (272)
T d1qpca_          82 IYIITEYMENGSLVDFLKTPSGIK----LTINKLLDMAAQIAEGMAFIEERNYIHRDLRA  137 (272)
T ss_dssp             CEEEEECCTTCBHHHHTTSHHHHT----CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSG
T ss_pred             eEEEEEeCCCCcHHHHHhhcCCCC----CCHHHHHHHHHHHHHHHHHHHhCCcccCccch
Confidence            8999999986 9999876554322    89999999999999999999999999999997

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.88  E-value=1.8e-22  Score=207.20  Aligned_cols=127  Identities=18%  Similarity=0.236  Sum_probs=107.5

Q ss_pred             CceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecCh----hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCC
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE  489 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk----~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~  489 (552)
                      ++|++++.||+|+||+||+|+++.+++.||||++.+..    .....+.+|..+++.+++   .+|||||+++++|...+
T Consensus         4 ddy~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~---~~hpnIv~l~~~~~~~~   80 (364)
T d1omwa3           4 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST---GDCPFIVCMSYAFHTPD   80 (364)
T ss_dssp             TTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSS---SCCTTBCCEEEEEECSS
T ss_pred             HhCeeeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhc---CCCCcEEEEEEEEEECC
Confidence            57999999999999999999999999999999997532    122345556544444432   11299999999999999


Q ss_pred             EEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          490 HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       490 hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      .+|||||||.+ +|.++|+....      +++..++.|+.||+.||.|||++||||+|||+
T Consensus        81 ~~~ivmE~~~gg~L~~~l~~~~~------~~e~~~~~~~~qi~~aL~ylH~~~iiHrDlKP  135 (364)
T d1omwa3          81 KLSFILDLMNGGDLHYHLSQHGV------FSEADMRFYAAEIILGLEHMHNRFVVYRDLKP  135 (364)
T ss_dssp             EEEEEECCCCSCBHHHHHHHHCS------CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSG
T ss_pred             EEEEEEEecCCCcHHHHHHhccc------ccHHHHHHHHHHHHHHHHHHHHCCccceeecc
Confidence            99999999986 99999987654      89999999999999999999999999999997

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=1.1e-22  Score=206.20  Aligned_cols=124  Identities=20%  Similarity=0.295  Sum_probs=107.1

Q ss_pred             ceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeC------
Q 008813          415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL------  488 (552)
Q Consensus       415 RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~------  488 (552)
                      +|..+++||+|+||+||+|+++.+++.||||+++.....   ..+|+.+|++|+|      +|||+++++|...      
T Consensus        21 ~Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~---~~~Ei~il~~l~h------~niv~~~~~~~~~~~~~~~   91 (350)
T d1q5ka_          21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF---KNRELQIMRKLDH------CNIVRLRYFFYSSGEKKDE   91 (350)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSSS---CCHHHHHHHHCCC------TTBCCEEEEEEEC--CCSC
T ss_pred             CcEeeeEEeeCcCeEEEEEEECCCCCEEEEEEECccchH---HHHHHHHHHhcCC------CCCCcEEEEEEecCccCCc
Confidence            799999999999999999999999999999999876432   3479999999998      9999999999643      


Q ss_pred             CEEEEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          489 EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       489 ~hLyIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      .++|||||||++++...+.......  .++++..++.|++||+.||+|||++||||+|||+
T Consensus        92 ~~~~lv~Ey~~~~~~~~l~~~~~~~--~~l~~~~~~~i~~qil~aL~yLH~~~IiHrDiKp  150 (350)
T d1q5ka_          92 VYLNLVLDYVPETVYRVARHYSRAK--QTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKP  150 (350)
T ss_dssp             CEEEEEEECCSEEHHHHHHHHHHTT--CCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCG
T ss_pred             eEEEEEEeccCCccHHHHHhhhhcc--CCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCc
Confidence            4699999999997776665432211  2399999999999999999999999999999997

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.87  E-value=1.4e-22  Score=202.19  Aligned_cols=126  Identities=15%  Similarity=0.156  Sum_probs=110.2

Q ss_pred             cCceEEEEEeccCCceEEEEEEECCCCc---EEEEEEEecC--hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEe
Q 008813          413 AGRYYVTEYLGSAAFSKVFQAQDLHTGV---DVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH  487 (552)
Q Consensus       413 ~~RY~Ile~LGkG~FG~VykA~Dkktg~---~VAVKIIk~s--k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~  487 (552)
                      .++|++.++||+|+||+||+|+++.+++   .||||++...  ....+.+.+|+++|++|+|      ||||++++++..
T Consensus        25 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H------pnIv~l~g~~~~   98 (299)
T d1jpaa_          25 ISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDH------PNVIHLEGVVTK   98 (299)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCC------TTBCCEEEEECS
T ss_pred             hhhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCC------CCCccEEEEEee
Confidence            3679999999999999999999986654   5889988653  3445678999999999998      999999999999


Q ss_pred             CCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          488 LEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       488 ~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      .+.+|||||||.+ +|.+++.....     .+++.++..|+.||+.||.|||+++|||+|||+
T Consensus        99 ~~~~~iv~Ey~~~g~L~~~~~~~~~-----~l~~~~~~~i~~qia~gl~yLH~~~iiHrDlKp  156 (299)
T d1jpaa_          99 STPVMIITEFMENGSLDSFLRQNDG-----QFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAA  156 (299)
T ss_dssp             SSSCEEEEECCTTEEHHHHHHTTTT-----CSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCG
T ss_pred             CCEEEEEEEecCCCcceeeeccccC-----CCCHHHHHHHHHHHHHHHHHHhhCCCccCcccc
Confidence            9999999999987 99998886543     289999999999999999999999999999997

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.87  E-value=3.3e-22  Score=197.21  Aligned_cols=127  Identities=19%  Similarity=0.216  Sum_probs=112.5

Q ss_pred             ecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEE
Q 008813          412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL  491 (552)
Q Consensus       412 i~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hL  491 (552)
                      +.+||++++.||+|+||.||+|++..+++.||||++..... ...+.+|+++++.++|+     ++|+.+..++...+..
T Consensus         5 vg~rY~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~-~~~~~~E~~i~~~l~~~-----~~i~~~~~~~~~~~~~   78 (299)
T d1ckia_           5 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK-HPQLHIESKIYKMMQGG-----VGIPTIRWCGAEGDYN   78 (299)
T ss_dssp             ETTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCTT-SCCHHHHHHHHHHSTTS-----TTCCCEEEEEEETTEE
T ss_pred             ECCEEEEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhcc-CHHHHHHHHHHHHccCC-----CcccEEEEEEecCCEE
Confidence            44689999999999999999999999999999999886533 34678999999999985     6777888888899999


Q ss_pred             EEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          492 FIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       492 yIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      +|||||++++|...+......     +++..++.++.||+.||+|||++||||+|||+
T Consensus        79 ~ivme~~~~~l~~~~~~~~~~-----~~~~~~~~~~~qi~~~l~~lH~~~iiHrDiKp  131 (299)
T d1ckia_          79 VMVMELLGPSLEDLFNFCSRK-----FSLKTVLLLADQMISRIEYIHSKNFIHRDVKP  131 (299)
T ss_dssp             EEEEECCCCBHHHHHHHTTTC-----CCHHHHHHHHHHHHHHHHHHHHTTEECSCCCG
T ss_pred             EEEEEEcCCchhhhhhhccCC-----CcHHHHHHHHHHHHHHHHHHHHCCeeeccCCH
Confidence            999999999988887765432     99999999999999999999999999999997

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=2.3e-22  Score=199.77  Aligned_cols=126  Identities=22%  Similarity=0.320  Sum_probs=108.0

Q ss_pred             cCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC---hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEe--
Q 008813          413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH--  487 (552)
Q Consensus       413 ~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s---k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~--  487 (552)
                      .+||+++++||+|+||+||+|+++.+++.||||++...   .....++.+|+++|++++|      +||+++++.+..  
T Consensus         9 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h------~nii~~~~~~~~~~   82 (318)
T d3blha1           9 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH------ENVVNLIEICRTKA   82 (318)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCC------TTBCCEEEEEEC--
T ss_pred             cCCEEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhcC------CCccceEeeeeccc
Confidence            47999999999999999999999999999999998653   2345678899999999998      999999999864  


Q ss_pred             ------CCEEEEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          488 ------LEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       488 ------~~hLyIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                            .+++|||||++.+.+...+.....     .+++..++.|++||+.||.|||++||||+|||+
T Consensus        83 ~~~~~~~~~~~iv~e~~~~~~~~~~~~~~~-----~~~~~~~~~i~~qil~~l~~lH~~~ivHrDlKp  145 (318)
T d3blha1          83 SPYNRCKGSIYLVFDFCEHDLAGLLSNVLV-----KFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKA  145 (318)
T ss_dssp             --------CEEEEEECCCEEHHHHHTCTTC-----CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCG
T ss_pred             ccccccCceEEEEEeccCCCccchhhhccc-----ccccHHHHHHHHHHHHHHHHhccCCEEecCcCc
Confidence                  357999999999977766654433     289999999999999999999999999999997

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=2.1e-22  Score=197.06  Aligned_cols=125  Identities=17%  Similarity=0.171  Sum_probs=112.8

Q ss_pred             CceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEEEE
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFI  493 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hLyI  493 (552)
                      ..|++++.||+|+||.||+|+++ +++.||||++++.....+.+++|++++++++|      ||||++++++...+.+++
T Consensus         4 ~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~Ev~~~~~l~H------pnIv~~~g~~~~~~~~~i   76 (258)
T d1k2pa_           4 KDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSH------EKLVQLYGVCTKQRPIFI   76 (258)
T ss_dssp             CCCCCCCCCCEETTEEEEEEEET-TTEEEEEEEEESSSSCHHHHHHHHHHHHTCCC------TTBCCEEEEECCSSSEEE
T ss_pred             HHCEEeEEEecCCCeEEEEEEEC-CCCEEEEEEECcCcCCHHHHHHHHHHHHhcCC------CceeeEEEEEeeCCceEE
Confidence            35788899999999999999984 77899999999876666789999999999998      999999999999999999


Q ss_pred             EEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          494 VCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       494 VmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      ||||+.+ +|.+++......     +++..++.|+.||+.||.|||++||||++||+-
T Consensus        77 v~Ey~~~g~l~~~~~~~~~~-----~~~~~~~~i~~qi~~gl~~LH~~~iiH~dlk~~  129 (258)
T d1k2pa_          77 ITEYMANGCLLNYLREMRHR-----FQTQQLLEMCKDVCEAMEYLESKQFLHRDLAAR  129 (258)
T ss_dssp             EEECCTTEEHHHHHHSGGGC-----CCHHHHHHHHHHHHHHHHHHHHTTBCCSCCSGG
T ss_pred             EEEccCCCcHHHhhhccccC-----CcHHHHHHHHHHHHHHHHHHhhcCcccccccce
Confidence            9999976 899988766542     899999999999999999999999999999974

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=7.4e-22  Score=196.04  Aligned_cols=124  Identities=18%  Similarity=0.192  Sum_probs=106.9

Q ss_pred             CceEEEEE-eccCCceEEEEEEECC--CCcEEEEEEEecC--hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeC
Q 008813          414 GRYYVTEY-LGSAAFSKVFQAQDLH--TGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL  488 (552)
Q Consensus       414 ~RY~Ile~-LGkG~FG~VykA~Dkk--tg~~VAVKIIk~s--k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~  488 (552)
                      ++|.+.+. ||+|+||.||+|.++.  ++..||||+++..  +...+.+.+|+++|++++|      ||||++++++.. 
T Consensus         8 ~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l~H------pnIv~l~g~~~~-   80 (285)
T d1u59a_           8 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDN------PYIVRLIGVCQA-   80 (285)
T ss_dssp             GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCC------TTBCCEEEEEES-
T ss_pred             cCeEECCcEEecccCeEEEEEEEecCCCcEEEEEEEEChhcCHHHHHHHHHHHHHHHhCCC------CCEeeEeeeecc-
Confidence            46888885 9999999999998764  4557999999764  3445778999999999998      999999999864 


Q ss_pred             CEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          489 EHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       489 ~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      +.+|||||||.+ +|.+++...+.     .+++..++.|+.||+.||.|||+++|||+|||+
T Consensus        81 ~~~~lvmE~~~~g~L~~~l~~~~~-----~l~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp  137 (285)
T d1u59a_          81 EALMLVMEMAGGGPLHKFLVGKRE-----EIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAA  137 (285)
T ss_dssp             SSEEEEEECCTTEEHHHHHTTCTT-----TSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSG
T ss_pred             CeEEEEEEeCCCCcHHHHhhcccc-----CCCHHHHHHHHHHHHHHHHHHHhCCeecCcCch
Confidence            568999999997 99999865442     289999999999999999999999999999997

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=6.3e-22  Score=199.05  Aligned_cols=134  Identities=16%  Similarity=0.181  Sum_probs=110.3

Q ss_pred             eecCceEEEEEeccCCceEEEEEEECCCCc-----EEEEEEEecC--hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEe
Q 008813          411 VIAGRYYVTEYLGSAAFSKVFQAQDLHTGV-----DVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYD  483 (552)
Q Consensus       411 vi~~RY~Ile~LGkG~FG~VykA~Dkktg~-----~VAVKIIk~s--k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d  483 (552)
                      +..++|++.+.||+|+||+||+|+++.+++     .||+|++...  ......+.+|+.+|+++.+|     ||||++++
T Consensus        34 i~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~H-----pnIv~l~~  108 (325)
T d1rjba_          34 FPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSH-----ENIVNLLG  108 (325)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCC-----TTBCCEEE
T ss_pred             CCHHHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccCHHHHHHHHHHHHHHHHhcCC-----CcEeEEEE
Confidence            344689999999999999999999876543     6999998653  33446788999999999433     99999999


Q ss_pred             EEEeCCEEEEEEecCCC-CHHHHHHhhccCC-----------------CCcCCCHHHHHHHHHHHHHHHHHHHhCCCeee
Q 008813          484 YFYHLEHLFIVCELLRA-NLYEFQKFNQESG-----------------GEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYF  545 (552)
Q Consensus       484 ~F~~~~hLyIVmEll~G-sL~d~Lk~~~~~g-----------------~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~  545 (552)
                      ++...+++|||||||.+ +|.++|+.++...                 ...++++..++.|+.||+.||.|||+++|||+
T Consensus       109 ~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~IiHR  188 (325)
T d1rjba_         109 ACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHR  188 (325)
T ss_dssp             EECSSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEET
T ss_pred             EEeeCCeEEEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeec
Confidence            99999999999999987 9999998654210                 01238999999999999999999999999999


Q ss_pred             eccc
Q 008813          546 ILFC  549 (552)
Q Consensus       546 ~L~~  549 (552)
                      |||+
T Consensus       189 DlKp  192 (325)
T d1rjba_         189 DLAA  192 (325)
T ss_dssp             TCSG
T ss_pred             cCch
Confidence            9997

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=7e-22  Score=194.75  Aligned_cols=130  Identities=22%  Similarity=0.276  Sum_probs=107.0

Q ss_pred             cCceEEEEEeccCCceEEEEEEECCC-CcEEEEEEEecC---hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEe-
Q 008813          413 AGRYYVTEYLGSAAFSKVFQAQDLHT-GVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH-  487 (552)
Q Consensus       413 ~~RY~Ile~LGkG~FG~VykA~Dkkt-g~~VAVKIIk~s---k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~-  487 (552)
                      .+||++++.||+|+||+||+|++..+ ++.||||+++..   ......+.+|+.+|+.|+.   ..|||||+++++|.. 
T Consensus         6 ~~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~---~~HpnIv~~~~~~~~~   82 (305)
T d1blxa_           6 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLET---FEHPNVVRLFDVCTVS   82 (305)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHH---TCCTTBCCEEEEEEEE
T ss_pred             cCCEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhh---cCCCCcceeeeeeccc
Confidence            46899999999999999999999766 678999999753   2233457789999888742   011999999999963 


Q ss_pred             ----CCEEEEEEecCCCCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          488 ----LEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       488 ----~~hLyIVmEll~GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                          ..+++|+||+|.+.+..++......+    +++..++.|+.||+.||+|||+++|||+|||+
T Consensus        83 ~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~----~~~~~~~~~~~qi~~aL~yLH~~~ivHrDiKp  144 (305)
T d1blxa_          83 RTDRETKLTLVFEHVDQDLTTYLDKVPEPG----VPTETIKDMMFQLLRGLDFLHSHRVVHRDLKP  144 (305)
T ss_dssp             ECSSEEEEEEEEECCSCBHHHHHHHSCTTC----SCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCG
T ss_pred             ccccCceEEEEEEeccCCchhhhhhccCCC----CCHHHHHHHHHHHHHHHHHHHhCCEEecCCCc
Confidence                35799999999997766665554433    89999999999999999999999999999997

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=5.8e-22  Score=197.02  Aligned_cols=127  Identities=18%  Similarity=0.185  Sum_probs=111.1

Q ss_pred             ecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEE
Q 008813          412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL  491 (552)
Q Consensus       412 i~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hL  491 (552)
                      -.++|++.+.||+|+||+||+|++..+ +.||||+++......+.+.+|+.+|++++|      +|||++++++. .+.+
T Consensus        15 ~~~~~~i~~~iG~G~fg~Vy~~~~~~~-~~vAiK~l~~~~~~~~~~~~E~~~l~~l~h------~nIv~~~g~~~-~~~~   86 (285)
T d1fmka3          15 PRESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQEAQVMKKLRH------EKLVQLYAVVS-EEPI   86 (285)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEETTT-EEEEEEECCTTSSCHHHHHHHHHHHHHCCC------TTBCCEEEEEC-SSSC
T ss_pred             CHHHEEEeeEEeeCCCeEEEEEEECCC-CEEEEEEECcccCCHHHHHHHHHHHHhccc------CCEeEEEEEEe-cCCe
Confidence            346899999999999999999998765 569999998765556789999999999998      99999999985 4567


Q ss_pred             EEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          492 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       492 yIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      +||||||.+ +|..++.......    +++..++.|+.||+.||.|||+++|||+|||+-
T Consensus        87 ~lv~Ey~~~g~l~~~~~~~~~~~----l~~~~~~~i~~~i~~gl~~LH~~~ivH~DlKp~  142 (285)
T d1fmka3          87 YIVTEYMSKGSLLDFLKGETGKY----LRLPQLVDMAAQIASGMAYVERMNYVHRDLRAA  142 (285)
T ss_dssp             EEEECCCTTCBHHHHHSHHHHTT----CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGG
T ss_pred             EEEEEecCCCchhhhhhhccccc----chHHHHHHHHHHHHHHHHHHhhhheecccccce
Confidence            999999987 8888887654333    899999999999999999999999999999973

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=8.4e-22  Score=194.42  Aligned_cols=117  Identities=18%  Similarity=0.163  Sum_probs=101.7

Q ss_pred             EEeccCCceEEEEEEEC--CCCcEEEEEEEecC---hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEEEEE
Q 008813          420 EYLGSAAFSKVFQAQDL--HTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIV  494 (552)
Q Consensus       420 e~LGkG~FG~VykA~Dk--ktg~~VAVKIIk~s---k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hLyIV  494 (552)
                      ++||+|+||+||+|.+.  .+++.||||+++..   ....+.+.+|+++|++|+|      ||||++++++.. +.+|||
T Consensus        13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~H------pnIv~~~g~~~~-~~~~lv   85 (277)
T d1xbba_          13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDN------PYIVRMIGICEA-ESWMLV   85 (277)
T ss_dssp             EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCC------TTBCCEEEEEES-SSEEEE
T ss_pred             CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCCC------CCCceEEEEecc-CCEEEE
Confidence            36999999999999864  45688999999753   3345678999999999998      999999999864 567999


Q ss_pred             EecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          495 CELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       495 mEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ||||.+ +|.++++....      +++..+..|+.||+.||.|||+++|||+|||+
T Consensus        86 mE~~~~g~L~~~l~~~~~------l~~~~~~~i~~qi~~gl~ylH~~~iiHrDlKp  135 (277)
T d1xbba_          86 MEMAELGPLNKYLQQNRH------VKDKNIIELVHQVSMGMKYLEESNFVHRDLAA  135 (277)
T ss_dssp             EECCTTEEHHHHHHHCTT------CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSG
T ss_pred             EEcCCCCcHHHHHhhccC------CCHHHHHHHHHHHHHHHhhHHhCCcccCCCcc
Confidence            999987 99999987553      89999999999999999999999999999997

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=3.3e-22  Score=197.53  Aligned_cols=124  Identities=19%  Similarity=0.216  Sum_probs=107.4

Q ss_pred             eecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecC---hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEe
Q 008813          411 VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH  487 (552)
Q Consensus       411 vi~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~s---k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~  487 (552)
                      +..++|++.+.||+|+||.||+|+..   ..||||+++..   ....+.+.+|+.+|++++|      ||||++++++. 
T Consensus         5 i~~~~~~~~~~lG~G~fg~Vy~~~~~---~~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~H------pnIv~~~~~~~-   74 (276)
T d1uwha_           5 IPDGQITVGQRIGSGSFGTVYKGKWH---GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH------VNILLFMGYST-   74 (276)
T ss_dssp             CCTTCCCCCSEEEECSSCEEEEEESS---SEEEEEECCCSSCCTTHHHHHHHHHHHHTTCCC------TTBCCEEEEEC-
T ss_pred             cccccEEEEEEEeeCCCcEEEEEEEC---CEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCC------CCEeeeeEEEe-
Confidence            44578999999999999999999754   35999999753   3345778899999999998      99999999764 


Q ss_pred             CCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          488 LEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       488 ~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      .+.++||||||.+ +|.+++...+.     ++++..+..|+.||+.||.|||+++|||+|||+
T Consensus        75 ~~~~~lv~Ey~~~g~L~~~l~~~~~-----~~~~~~~~~i~~qi~~gl~yLH~~~ivHrDlKp  132 (276)
T d1uwha_          75 APQLAIVTQWCEGSSLYHHLHIIET-----KFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKS  132 (276)
T ss_dssp             SSSCEEEEECCCEEEHHHHHHTSCC-----CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCG
T ss_pred             ccEEEEEEecCCCCCHHHHHhhccC-----CCCHHHHHHHHHHHHHHHHHHhcCCEeccccCH
Confidence            5668999999986 99999986543     289999999999999999999999999999997

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=1.3e-21  Score=191.51  Aligned_cols=128  Identities=19%  Similarity=0.213  Sum_probs=110.0

Q ss_pred             eecCceEEEEEeccCCceEEEEEEECCC---CcEEEEEEEecC--hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEE
Q 008813          411 VIAGRYYVTEYLGSAAFSKVFQAQDLHT---GVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYF  485 (552)
Q Consensus       411 vi~~RY~Ile~LGkG~FG~VykA~Dkkt---g~~VAVKIIk~s--k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F  485 (552)
                      +..++|++.+.||+|+||+||+|.+..+   +..||||+++..  ....+.+.+|+.+|++++|      ||||++++++
T Consensus         4 i~~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l~H------pnIv~l~~~~   77 (273)
T d1mp8a_           4 IQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDH------PHIVKLIGVI   77 (273)
T ss_dssp             CCGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCC------TTBCCEEEEE
T ss_pred             cCHHHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccCHHHHHHHHHHHHHHHhCCC------CCEeeEEEEE
Confidence            3457899999999999999999998754   356889988653  3345678999999999998      9999999998


Q ss_pred             EeCCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          486 YHLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       486 ~~~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      . .+++||||||+.+ +|.+++.....     ++++..++.++.||+.||.|||+++|||+|||+-
T Consensus        78 ~-~~~~~iv~E~~~~g~l~~~~~~~~~-----~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDlKp~  137 (273)
T d1mp8a_          78 T-ENPVWIIMELCTLGELRSFLQVRKY-----SLDLASLILYAYQLSTALAYLESKRFVHRDIAAR  137 (273)
T ss_dssp             C-SSSCEEEEECCTTEEHHHHHHHTTT-----TSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGG
T ss_pred             e-cCeEEEEEEeccCCcHHhhhhccCC-----CCCHHHHHHHHHHHHHHhhhhcccCeeccccchh
Confidence            5 5789999999987 89988776543     2899999999999999999999999999999973

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=2.4e-21  Score=193.33  Aligned_cols=136  Identities=19%  Similarity=0.188  Sum_probs=114.7

Q ss_pred             CceecCceEEEEEeccCCceEEEEEEEC-----CCCcEEEEEEEecC--hhhHHHHHHHHHHHHHhcccCCCCCCCeeEe
Q 008813          409 NTVIAGRYYVTEYLGSAAFSKVFQAQDL-----HTGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRL  481 (552)
Q Consensus       409 gdvi~~RY~Ile~LGkG~FG~VykA~Dk-----ktg~~VAVKIIk~s--k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL  481 (552)
                      +++..++|++.++||+|+||.||+|.++     .+++.||||+++..  ......+.+|+.+++++.+|     ||||++
T Consensus        18 ~~~~~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~~H-----pnIv~~   92 (311)
T d1t46a_          18 WEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNH-----MNIVNL   92 (311)
T ss_dssp             GBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCC-----TTBCCE
T ss_pred             ccCCHHHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHHHHHhccCC-----CCEEEE
Confidence            3455689999999999999999999863     46689999999764  33445788999999999643     999999


Q ss_pred             EeEEEeCCEEEEEEecCCC-CHHHHHHhhccC------------CCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecc
Q 008813          482 YDYFYHLEHLFIVCELLRA-NLYEFQKFNQES------------GGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILF  548 (552)
Q Consensus       482 ~d~F~~~~hLyIVmEll~G-sL~d~Lk~~~~~------------g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~  548 (552)
                      ++++....+++||||||.+ +|.++++.....            ....++++..++.|+.||+.||.|||+++|||+|||
T Consensus        93 ~g~~~~~~~~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~~ivHrDLK  172 (311)
T d1t46a_          93 LGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLA  172 (311)
T ss_dssp             EEEECSSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCS
T ss_pred             EEEEeeCCEEEEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCeeecccc
Confidence            9999999999999999987 999999865421            011248999999999999999999999999999999


Q ss_pred             c
Q 008813          549 C  549 (552)
Q Consensus       549 ~  549 (552)
                      +
T Consensus       173 p  173 (311)
T d1t46a_         173 A  173 (311)
T ss_dssp             G
T ss_pred             c
Confidence            6

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=1.8e-21  Score=196.16  Aligned_cols=126  Identities=18%  Similarity=0.287  Sum_probs=113.2

Q ss_pred             CceEEEEEeccCCceEEEEEEEC---CCCcEEEEEEEecC-----hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEE
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDL---HTGVDVCLKIIKND-----KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYF  485 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dk---ktg~~VAVKIIk~s-----k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F  485 (552)
                      ++|++++.||+|+||+||+|++.   .+|+.||||++++.     ....+.+.+|+++|++++|+     |||+++++++
T Consensus        24 ~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~-----pnIv~~~~~~   98 (322)
T d1vzoa_          24 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQS-----PFLVTLHYAF   98 (322)
T ss_dssp             GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTC-----TTBCCEEEEE
T ss_pred             hceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCC-----CeEEEeeeee
Confidence            67999999999999999999874   46899999998653     22346788999999999986     8999999999


Q ss_pred             EeCCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          486 YHLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       486 ~~~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      .....+++||||+.+ +|.+++...+.      +++..++.+++||+.||.|||++||||+|||+-
T Consensus        99 ~~~~~~~~v~e~~~~~~L~~~i~~~~~------~~e~~~~~~~~Qi~~al~~lH~~~ivHrDiKp~  158 (322)
T d1vzoa_          99 QTETKLHLILDYINGGELFTHLSQRER------FTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLE  158 (322)
T ss_dssp             EETTEEEEEECCCCSCBHHHHHHHHSC------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGG
T ss_pred             ccCCceeeeeecccccHHHHHHHhccc------ccHHHHHHHHHHHHHHHHHhhcCCEEeccCCcc
Confidence            999999999999987 99999988764      789999999999999999999999999999973

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=4.2e-21  Score=189.23  Aligned_cols=125  Identities=16%  Similarity=0.182  Sum_probs=109.0

Q ss_pred             CceEEEEEeccCCceEEEEEEECCCC----cEEEEEEEecC--hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEe
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLHTG----VDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH  487 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkktg----~~VAVKIIk~s--k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~  487 (552)
                      .+|++.++||+|+||.||+|.++.++    ..||||+++..  ......+.+|+++|++|+|      ||||++++++..
T Consensus         7 ~~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~H------~nIv~~~g~~~~   80 (283)
T d1mqba_           7 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSH------HNIIRLEGVISK   80 (283)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCC------TTBCCEEEEECS
T ss_pred             HHeEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccChHHHHHHHHHHHHHHhcCC------CCEeeeeEEEec
Confidence            57999999999999999999877544    47999999753  3344578899999999998      999999999999


Q ss_pred             CCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          488 LEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       488 ~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      .+.+++|||||.+ +|.+++.....     ++++..+..|+.||+.||.|||+++|||+|||+
T Consensus        81 ~~~~~~v~e~~~~~~l~~~~~~~~~-----~~~~~~~~~i~~~i~~gl~~lH~~~iiHrDlKp  138 (283)
T d1mqba_          81 YKPMMIITEYMENGALDKFLREKDG-----EFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAA  138 (283)
T ss_dssp             SSSEEEEEECCTTEEHHHHHHHTTT-----CSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCG
T ss_pred             CCceEEEEEecccCcchhhhhcccc-----cccHHHHHHHHHHHHHhhhhccccccccCcccc
Confidence            9999999999988 78887776543     289999999999999999999999999999997

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=1.3e-21  Score=192.04  Aligned_cols=125  Identities=18%  Similarity=0.159  Sum_probs=107.8

Q ss_pred             ecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEe-CCE
Q 008813          412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH-LEH  490 (552)
Q Consensus       412 i~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~-~~h  490 (552)
                      -.++|++++.||+|+||.||+|+++  ++.||||++++.. ..+.+.+|+++|++++|      ||||++++++.. .+.
T Consensus         5 ~~~~~~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~i~~~~-~~~~~~~E~~~l~~l~H------pnIv~~~g~~~~~~~~   75 (262)
T d1byga_           5 NMKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDA-TAQAFLAEASVMTQLRH------SNLVQLLGVIVEEKGG   75 (262)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEET--TEEEEEEECCCCC---HHHHHTHHHHTTCCC------TTBCCEEEEECCC--C
T ss_pred             CHHHeEEeEEEecCCCeEEEEEEEC--CeEEEEEEECcHH-HHHHHHHHHHHHHhCCC------CCEeeEEEEEEecCCc
Confidence            3467999999999999999999984  6789999997653 34678999999999998      999999999864 467


Q ss_pred             EEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          491 LFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       491 LyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      +||||||+.+ +|.++|..+...    ++++..++.|+.||+.||.|||+++|||+|||+
T Consensus        76 ~~lv~ey~~~g~L~~~l~~~~~~----~l~~~~~~~i~~~i~~al~ylH~~~ivH~dlkp  131 (262)
T d1byga_          76 LYIVTEYMAKGSLVDYLRSRGRS----VLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAA  131 (262)
T ss_dssp             CEEEECCCTTEEHHHHHHHHHHH----HCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSG
T ss_pred             EEEEEeccCCCCHHHHHHhcCCC----CCCHHHHHHHHHHHHhhccccccCceeccccch
Confidence            8999999987 999999765432    289999999999999999999999999999997

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=1.2e-20  Score=188.76  Aligned_cols=124  Identities=16%  Similarity=0.195  Sum_probs=102.8

Q ss_pred             CceEEEEEeccCCceEEEEEEECCCCc----EEEEEEEecC--hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEe
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLHTGV----DVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH  487 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkktg~----~VAVKIIk~s--k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~  487 (552)
                      ..|++++.||+|+||+||+|.+..+++    .||+|.++..  ....+.+.+|+++|++++|      ||||++++++..
T Consensus         9 ~dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H------pnIv~l~g~~~~   82 (317)
T d1xkka_           9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN------PHVCRLLGICLT   82 (317)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC----CTHHHHHHHHHHHHHCCC------TTBCCEEEEEES
T ss_pred             HHCEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccccCHHHHHHHHHHHHHHHhCCC------CCEeeEEEEEec
Confidence            359999999999999999999988776    5788887643  3345778999999999998      999999999987


Q ss_pred             CCEEEEEEecCC-CCHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          488 LEHLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       488 ~~hLyIVmEll~-GsL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      .+ .+++||++. ++|.+++.....     ++++..++.|+.||+.||.|||+++|||+|||+
T Consensus        83 ~~-~~~v~e~~~~~~l~~~~~~~~~-----~~~~~~~~~i~~qi~~gl~yLH~~~iiHrDlKp  139 (317)
T d1xkka_          83 ST-VQLITQLMPFGCLLDYVREHKD-----NIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAA  139 (317)
T ss_dssp             SS-EEEEEECCTTCBHHHHHHHTSS-----SCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCG
T ss_pred             CC-eeEEEEeccCCccccccccccc-----CCCHHHHHHHHHHHHHHHHHHHHcCcccCcchh
Confidence            65 556666655 599998887643     289999999999999999999999999999997

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=6.7e-21  Score=189.96  Aligned_cols=132  Identities=17%  Similarity=0.174  Sum_probs=109.0

Q ss_pred             CceEEEEEeccCCceEEEEEEECCCCcE--EEEEEEecC--hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCC
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLHTGVD--VCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE  489 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkktg~~--VAVKIIk~s--k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~  489 (552)
                      ++|++.+.||+|+||.||+|.++.++..  ||||.++..  ....+.+.+|+++|+++.+|     ||||++++++...+
T Consensus        10 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~H-----pnIv~~~~~~~~~~   84 (309)
T d1fvra_          10 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHH-----PNIINLLGACEHRG   84 (309)
T ss_dssp             GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCC-----TTBCCEEEEEEETT
T ss_pred             HHcEEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcccChHHHHHHHHHHHHHHhccCC-----CCEeeEEEEEecCC
Confidence            5799999999999999999999888764  677777643  33445789999999999433     99999999999999


Q ss_pred             EEEEEEecCCC-CHHHHHHhhcc----------CCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          490 HLFIVCELLRA-NLYEFQKFNQE----------SGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       490 hLyIVmEll~G-sL~d~Lk~~~~----------~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      .+||||||+.+ +|.++|+.+..          ......|++..+..++.||+.||.|||+++|||+|||+-
T Consensus        85 ~~~iV~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~~iiHrDlkp~  156 (309)
T d1fvra_          85 YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAAR  156 (309)
T ss_dssp             EEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGG
T ss_pred             eeEEEEEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcCCccccccccc
Confidence            99999999986 99999975410          000123899999999999999999999999999999973

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.83  E-value=1.4e-20  Score=188.74  Aligned_cols=143  Identities=29%  Similarity=0.344  Sum_probs=117.6

Q ss_pred             CcceeeCceec-CceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChhhHHHHHHHHHHHHHhcccCC-----CCCC
Q 008813          403 DLPIILNTVIA-GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDP-----ADEH  476 (552)
Q Consensus       403 ~y~v~~gdvi~-~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd~-----~d~p  476 (552)
                      +||+.+|+++. +||+++++||+|+||+||+|+++.+++.||||++++.....+.+.+|+++|+.++|...     .+++
T Consensus         1 ~~p~~~g~~~~~~rY~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~   80 (362)
T d1q8ya_           1 YHPAFKGEPYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGAN   80 (362)
T ss_dssp             CCCCCTTCEETTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHT
T ss_pred             CCCCCCCCCccCCcEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeccccchHHHHHHHHHHHHhcchhhhhhhhcCcC
Confidence            47888999886 78999999999999999999999999999999999877667788999999999976211     1348


Q ss_pred             CeeEeEeEEEeC--CEEEEEEecCCC--CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHh-CCCeeeeccc
Q 008813          477 HILRLYDYFYHL--EHLFIVCELLRA--NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFL-LLVIYFILFC  549 (552)
Q Consensus       477 nIVrL~d~F~~~--~hLyIVmEll~G--sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs-~gIIH~~L~~  549 (552)
                      |||++++++...  ...+++|+++..  .............    +++..++.++.||+.||.|||+ +||||+|||+
T Consensus        81 ~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~i~~i~~qil~al~~lh~~~~IvHrDlKp  154 (362)
T d1q8ya_          81 HILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRG----IPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKP  154 (362)
T ss_dssp             TBCCCCEEEEEEETTEEEEEEEECCCCEEHHHHHHHTTTSC----CCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSG
T ss_pred             ceEEEEEEeeeccccceeeeeeecccccccccccccccccC----CcHHHHHHHHHHHHHHHHHHhhhcCcccccCCh
Confidence            999999998754  556666666543  5555555444333    8999999999999999999997 8999999997

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=8.9e-21  Score=188.25  Aligned_cols=134  Identities=20%  Similarity=0.302  Sum_probs=107.7

Q ss_pred             eecCceEEEEEeccCCceEEEEEEECCCC-------cEEEEEEEecC--hhhHHHHHHHHHHHHHhcccCCCCCCCeeEe
Q 008813          411 VIAGRYYVTEYLGSAAFSKVFQAQDLHTG-------VDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRL  481 (552)
Q Consensus       411 vi~~RY~Ile~LGkG~FG~VykA~Dkktg-------~~VAVKIIk~s--k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL  481 (552)
                      +..++|++.+.||+|+||.||+|++..++       ..||||+++..  ......+.+|+.++.++.+|     ||||++
T Consensus        10 i~~~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~~H-----pnIv~~   84 (299)
T d1fgka_          10 LPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH-----KNIINL   84 (299)
T ss_dssp             CCGGGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHCCC-----TTBCCE
T ss_pred             ccHHHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHHHHHHHHHHHHHHHhcCC-----CeEEec
Confidence            45579999999999999999999876543       47999999764  33456788999999999543     999999


Q ss_pred             EeEEEeCCEEEEEEecCCC-CHHHHHHhhccCC----------CCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          482 YDYFYHLEHLFIVCELLRA-NLYEFQKFNQESG----------GEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       482 ~d~F~~~~hLyIVmEll~G-sL~d~Lk~~~~~g----------~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ++++...+.+++|||||.+ +|.++|+.....+          ....+++..++.|+.||+.||.|||+++|||+|||+
T Consensus        85 ~~~~~~~~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~~ivHrDiKp  163 (299)
T d1fgka_          85 LGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAA  163 (299)
T ss_dssp             EEEECSSSSCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSG
T ss_pred             ccccccCCeEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhCCEEeeeecc
Confidence            9999999999999999987 9999998654211          112389999999999999999999999999999997

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=1e-20  Score=186.76  Aligned_cols=134  Identities=19%  Similarity=0.216  Sum_probs=109.1

Q ss_pred             eecCceEEEEEeccCCceEEEEEEECC-----CCcEEEEEEEecC--hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEe
Q 008813          411 VIAGRYYVTEYLGSAAFSKVFQAQDLH-----TGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYD  483 (552)
Q Consensus       411 vi~~RY~Ile~LGkG~FG~VykA~Dkk-----tg~~VAVKIIk~s--k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d  483 (552)
                      +..++|++++.||+|+||+||+|.+..     +++.||||+++..  ....+.+.+|+.++.++.||     +|||.+++
T Consensus        10 i~~~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~~h-----~~iv~~~~   84 (299)
T d1ywna1          10 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH-----LNVVNLLG   84 (299)
T ss_dssp             CCGGGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHCCC-----TTBCCEEE
T ss_pred             ccHHHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhhcCC-----CeEEEeee
Confidence            445789999999999999999999754     4578999999753  33446788899999999876     99999999


Q ss_pred             EEEeC-CEEEEEEecCCC-CHHHHHHhhccCC----------CCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          484 YFYHL-EHLFIVCELLRA-NLYEFQKFNQESG----------GEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       484 ~F~~~-~hLyIVmEll~G-sL~d~Lk~~~~~g----------~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      ++... ..++||||||.+ +|.++++..+...          ....+++..++.|+.||+.||.|||+++|||+|||+
T Consensus        85 ~~~~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~ivHrDlKp  162 (299)
T d1ywna1          85 ACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAA  162 (299)
T ss_dssp             EECSTTSCCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCG
T ss_pred             eeccCCCeEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhCCCcCCcCCc
Confidence            88754 579999999986 9999998654210          012389999999999999999999999999999997

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.83  E-value=1.2e-20  Score=187.08  Aligned_cols=132  Identities=16%  Similarity=0.147  Sum_probs=112.6

Q ss_pred             ecCceEEEEEeccCCceEEEEEEEC-----CCCcEEEEEEEecC--hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeE
Q 008813          412 IAGRYYVTEYLGSAAFSKVFQAQDL-----HTGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDY  484 (552)
Q Consensus       412 i~~RY~Ile~LGkG~FG~VykA~Dk-----ktg~~VAVKIIk~s--k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~  484 (552)
                      ..++|++++.||+|+||+||+|+++     .+++.||||+++..  ....+.+.+|+.+|+.++|      |||++++++
T Consensus        11 p~~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l~h------~niv~~~~~   84 (301)
T d1lufa_          11 PRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDN------PNIVKLLGV   84 (301)
T ss_dssp             CGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCC------TTBCCEEEE
T ss_pred             CHHHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhcCC------CCcccceee
Confidence            4467999999999999999999875     35678999999753  3345678999999999998      999999999


Q ss_pred             EEeCCEEEEEEecCCC-CHHHHHHhhccC------------------CCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeee
Q 008813          485 FYHLEHLFIVCELLRA-NLYEFQKFNQES------------------GGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYF  545 (552)
Q Consensus       485 F~~~~hLyIVmEll~G-sL~d~Lk~~~~~------------------g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~  545 (552)
                      +...+++++|||++.+ +|.++++.....                  ....++++..+..|+.||+.||.|||+++|||+
T Consensus        85 ~~~~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~~ivHr  164 (301)
T d1lufa_          85 CAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHR  164 (301)
T ss_dssp             ECSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCS
T ss_pred             eccCCceEEEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcccCCeEee
Confidence            9999999999999986 999999754321                  111238999999999999999999999999999


Q ss_pred             eccc
Q 008813          546 ILFC  549 (552)
Q Consensus       546 ~L~~  549 (552)
                      |||+
T Consensus       165 DlKp  168 (301)
T d1lufa_         165 DLAT  168 (301)
T ss_dssp             CCSG
T ss_pred             EEcc
Confidence            9997

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=1e-20  Score=186.24  Aligned_cols=125  Identities=22%  Similarity=0.245  Sum_probs=100.6

Q ss_pred             CceEEEEEeccCCceEEEEEEECC-CC--cEEEEEEEecC----hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEE
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLH-TG--VDVCLKIIKND----KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFY  486 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkk-tg--~~VAVKIIk~s----k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~  486 (552)
                      ++|++++.||+|+||.||+|+... ++  ..||||+++..    ....+.+.+|+++|++++|      ||||++++++.
T Consensus         8 ~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H------~nIv~~~g~~~   81 (273)
T d1u46a_           8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDH------RNLIRLYGVVL   81 (273)
T ss_dssp             GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCC------TTBCCEEEEEC
T ss_pred             HHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCC------CCEEEEEEEEe
Confidence            569999999999999999998653 33  46899998753    3345678999999999988      99999999996


Q ss_pred             eCCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          487 HLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       487 ~~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      . +.++||||||.+ +|.+++.....     ++++..++.++.||+.||.|||+++|||+|||+-
T Consensus        82 ~-~~~~lv~e~~~~~~l~~~~~~~~~-----~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDikp~  140 (273)
T d1u46a_          82 T-PPMKMVTELAPLGSLLDRLRKHQG-----HFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAAR  140 (273)
T ss_dssp             S-SSCEEEEECCTTCBHHHHHHHHGG-----GSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGG
T ss_pred             e-cchheeeeeecCcchhhhhhcccC-----CCCHHHHHHHHHHHHHHHHHhhhCCEeeeeecHH
Confidence            5 567999999986 88888776543     2999999999999999999999999999999973

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=3.7e-20  Score=184.68  Aligned_cols=136  Identities=15%  Similarity=0.138  Sum_probs=113.6

Q ss_pred             CceecCceEEEEEeccCCceEEEEEEECC-----CCcEEEEEEEecC--hhhHHHHHHHHHHHHHhcccCCCCCCCeeEe
Q 008813          409 NTVIAGRYYVTEYLGSAAFSKVFQAQDLH-----TGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRL  481 (552)
Q Consensus       409 gdvi~~RY~Ile~LGkG~FG~VykA~Dkk-----tg~~VAVKIIk~s--k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL  481 (552)
                      +++..++|++.+.||+|+||.||+|.++.     +++.||||+++..  ......+.+|+.++++++|      ||||++
T Consensus        15 ~ei~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l~h------~nIv~~   88 (308)
T d1p4oa_          15 WEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNC------HHVVRL   88 (308)
T ss_dssp             TBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCC------TTBCCE
T ss_pred             eeecHHHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHHcCC------CCEeee
Confidence            34455789999999999999999998753     3578999999754  2334568899999999998      999999


Q ss_pred             EeEEEeCCEEEEEEecCCC-CHHHHHHhhcc----CCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          482 YDYFYHLEHLFIVCELLRA-NLYEFQKFNQE----SGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       482 ~d~F~~~~hLyIVmEll~G-sL~d~Lk~~~~----~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      ++++...++++||||||.+ +|.+++.....    .....++++..+..|+.||+.||.|||+++|||+|||+-
T Consensus        89 ~~~~~~~~~~~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~~ivHrDlk~~  162 (308)
T d1p4oa_          89 LGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAAR  162 (308)
T ss_dssp             EEEECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGG
T ss_pred             eeEEecCCceeEEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhCCeeeceEcCC
Confidence            9999999999999999986 99999875421    111233789999999999999999999999999999973

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=1.1e-19  Score=181.20  Aligned_cols=123  Identities=16%  Similarity=0.168  Sum_probs=101.9

Q ss_pred             ecCceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecChhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCC--
Q 008813          412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE--  489 (552)
Q Consensus       412 i~~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~--  489 (552)
                      ++.+|.+.+.||+|+||.||+|+.  +++.||||+++..........+|+..+..++|      ||||++++++...+  
T Consensus         1 ~~~~~~l~~~iG~G~fg~Vy~~~~--~g~~vAvK~~~~~~~~~~~~e~ei~~~~~~~H------pnIv~~~~~~~~~~~~   72 (303)
T d1vjya_           1 IARTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSREERSWFREAEIYQTVMLRH------ENILGFIAADNKDNGT   72 (303)
T ss_dssp             CGGGEEEEEEEECCSSSEEEEEEE--TTEEEEEEEECGGGHHHHHHHHHHHTSTTCCC------TTBCCEEEEEEEECSS
T ss_pred             CCcEEEEEEEEeeCCCeEEEEEEE--CCEEEEEEEECccchhHHHHHHHHHHHhhCCC------CcCcceEEEEEeCCCc
Confidence            356799999999999999999986  58899999997654322222334444456776      99999999998653  


Q ss_pred             --EEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHh--------CCCeeeeccc
Q 008813          490 --HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFL--------LLVIYFILFC  549 (552)
Q Consensus       490 --hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs--------~gIIH~~L~~  549 (552)
                        ++|||||||.+ +|.++|++..       +++..+..++.|++.||.|||+        +||||+|||+
T Consensus        73 ~~~~~lv~Ey~~~g~L~~~l~~~~-------l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp  136 (303)
T d1vjya_          73 WTQLWLVSDYHEHGSLFDYLNRYT-------VTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKS  136 (303)
T ss_dssp             SEEEEEEEECCTTCBHHHHHHHCC-------BCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCG
T ss_pred             ceEEEEEEecccCCCHHHHHhcCC-------CCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCc
Confidence              79999999977 9999998653       8999999999999999999996        5999999997

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.79  E-value=2.3e-19  Score=179.71  Aligned_cols=122  Identities=16%  Similarity=0.151  Sum_probs=103.9

Q ss_pred             EEEEEeccCCceEEEEEEECCCC---cEEEEEEEec--ChhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEe-CCE
Q 008813          417 YVTEYLGSAAFSKVFQAQDLHTG---VDVCLKIIKN--DKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH-LEH  490 (552)
Q Consensus       417 ~Ile~LGkG~FG~VykA~Dkktg---~~VAVKIIk~--sk~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~-~~h  490 (552)
                      ...++||+|+||+||+|.+..++   ..||||++++  .....+.+.+|+++|++|+|      ||||++++++.. ++.
T Consensus        30 ~~~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H------pnIv~~~g~~~~~~~~  103 (311)
T d1r0pa_          30 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH------PNVLSLLGICLRSEGS  103 (311)
T ss_dssp             EEEEEEEEETTEEEEEEEECC----CEEEEEEEECCCCCHHHHHHHHHHHHHHHTCCC------TTBCCCCEEEEETTTE
T ss_pred             ccceEEeecCCeEEEEEEEECCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCC------CCEeEEeEEEEecCCc
Confidence            33578999999999999986543   4689999974  34455789999999999998      999999999876 468


Q ss_pred             EEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeeccc
Q 008813          491 LFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFC  549 (552)
Q Consensus       491 LyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~  549 (552)
                      +++|||||.+ +|.+++......     +++..+..|+.||+.||.|||+++|||+|||+
T Consensus       104 ~~lv~E~~~~g~l~~~~~~~~~~-----~~~~~~~~i~~qia~gL~~lH~~~iiHrDLK~  158 (311)
T d1r0pa_         104 PLVVLPYMKHGDLRNFIRNETHN-----PTVKDLIGFGLQVAKGMKFLASKKFVHRDLAA  158 (311)
T ss_dssp             EEEEEECCTTCBHHHHHHCTTCC-----CBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSG
T ss_pred             eEEEEEEeecCchhhhhcccccc-----chHHHHHHHHHHHHHhhhhhcccCcccCCccH
Confidence            9999999987 899988865432     78889999999999999999999999999997

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.58  E-value=1.7e-15  Score=139.83  Aligned_cols=111  Identities=14%  Similarity=0.144  Sum_probs=87.5

Q ss_pred             eEEEEEeccCCceEEEEEEECCCCcEEEEEEEecCh-------------------hhHHHHHHHHHHHHHhcccCCCCCC
Q 008813          416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK-------------------DFFDQSLDEIKLLKLVNKNDPADEH  476 (552)
Q Consensus       416 Y~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk-------------------~~~~~~lrEIkILk~L~hhd~~d~p  476 (552)
                      +.+.++||+|+||.||+|.+. +|+.||||+++...                   .....+.+|..++.++.+      .
T Consensus         2 ~~vg~~IG~G~~g~Vy~a~~~-~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~------~   74 (191)
T d1zara2           2 DAIGKLMGEGKESAVFNCYSE-KFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQG------L   74 (191)
T ss_dssp             SEEEEEEEECSSEEEEEEEET-TTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTT------S
T ss_pred             chhCCEeeeCcceEEEEEECC-CCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccC------C
Confidence            467899999999999999985 68999999986421                   012345578889999987      8


Q ss_pred             CeeEeEeEEEeCCEEEEEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCeeeecccc
Q 008813          477 HILRLYDYFYHLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLVIYFILFCF  550 (552)
Q Consensus       477 nIVrL~d~F~~~~hLyIVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gIIH~~L~~~  550 (552)
                      +++..+++..    .+|||||+++ .+.+             +++..+..++.||+.+|.|||++||||+|||+-
T Consensus        75 ~v~~~~~~~~----~~lvme~~~~~~~~~-------------l~~~~~~~i~~ql~~~l~~lH~~giiHrDiKP~  132 (191)
T d1zara2          75 AVPKVYAWEG----NAVLMELIDAKELYR-------------VRVENPDEVLDMILEEVAKFYHRGIVHGDLSQY  132 (191)
T ss_dssp             SSCCEEEEET----TEEEEECCCCEEGGG-------------CCCSCHHHHHHHHHHHHHHHHHTTEECSCCSTT
T ss_pred             CcceEEEecC----CEEEEEeeccccccc-------------hhhHHHHHHHHHHHHHHHHHhhCCEEEccCChh
Confidence            8988876532    2799999998 3311             555667889999999999999999999999973

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=96.18  E-value=0.024  Score=51.68  Aligned_cols=111  Identities=8%  Similarity=0.006  Sum_probs=77.7

Q ss_pred             CceEEEEEeccCCceEEEEEEECCCCcEEEEEEEecCh-hhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEEE
Q 008813          414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK-DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLF  492 (552)
Q Consensus       414 ~RY~Ile~LGkG~FG~VykA~Dkktg~~VAVKIIk~sk-~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hLy  492 (552)
                      +.|++++..+.++-+.||+...  .++.+.||+..... .....+.+|..+|..|..+     --+++++.+....+..+
T Consensus        14 ~~~~~~~~~~G~s~~~v~rv~~--~~~~~vlk~~~~~~~~~~~~~~~E~~~l~~l~~~-----vpvP~vl~~~~~~~~~~   86 (263)
T d1j7la_          14 EKYRCVKDTEGMSPAKVYKLVG--ENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGK-----LPVPKVLHFERHDGWSN   86 (263)
T ss_dssp             TTSEEEECSCCCSSSEEEEEEC--SSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTT-----SCCCCEEEEEEETTEEE
T ss_pred             hceEEEEcCCCCCCCcEEEEEe--CCCeEEEEEcCCCcccchhhHHHHHHHHHHHhcc-----CCCCcEEEEEecCCceE
Confidence            4677777665555678998753  45567788876532 2234567899999988652     34677888888889999


Q ss_pred             EEEecCCC-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCC
Q 008813          493 IVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLLV  542 (552)
Q Consensus       493 IVmEll~G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~gI  542 (552)
                      +||+++.| .+.+....           ......++.++...|..||+..+
T Consensus        87 lv~~~l~G~~~~~~~~~-----------~~~~~~~~~~l~~~l~~lH~~~~  126 (263)
T d1j7la_          87 LLMSEADGVLCSEEYED-----------EQSPEKIIELYAECIRLFHSIDI  126 (263)
T ss_dssp             EEEECCSSEEHHHHTTT-----------CSCHHHHHHHHHHHHHHHHTSCC
T ss_pred             EEEEecccccccccccc-----------cccHHHHHHHHHHHHHHHhccCc
Confidence            99999999 77654321           12234567888888999998654

>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Methylthioribose kinase MtnK
species: Bacillus subtilis [TaxId: 1423]

Probab=91.93  E-value=0.24  Score=48.84  Aligned_cols=86  Identities=17%  Similarity=0.078  Sum_probs=55.7

Q ss_pred             EEEeccCCceEEEEEEECCCCcEEEEEEEecC--------hhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCE
Q 008813          419 TEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND--------KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH  490 (552)
Q Consensus       419 le~LGkG~FG~VykA~Dkktg~~VAVKIIk~s--------k~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~h  490 (552)
                      .+.||.|....||+..+..+++.+.||.-...        ....++..+|.++|+.+....+   ..+++++.+  +...
T Consensus        31 ~~eig~G~~N~vfrV~~~~~~~svivKqa~p~~r~~g~~~~~~~~R~~~E~~~L~~~~~~~p---~~vP~v~~~--d~~~  105 (392)
T d2pula1          31 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVP---HLVPRVFYS--DTEM  105 (392)
T ss_dssp             EEECCSSSSEEEEEEEC----CEEEEEEECCGGGC--CCCCCCTTHHHHHHHHHHHHHTTCG---GGSCCEEEE--ETTT
T ss_pred             EEEeCCCceEeEEEEEeCCCCeEEEEecCCchhcccCCCCCCCHHHHHHHHHHHHHhhhhCC---CCcceEEEE--cCCC
Confidence            45689999999999988877888999975421        1123456789999988765311   345666643  4455


Q ss_pred             EEEEEecCCC--CHHHHHHhh
Q 008813          491 LFIVCELLRA--NLYEFQKFN  509 (552)
Q Consensus       491 LyIVmEll~G--sL~d~Lk~~  509 (552)
                      .++|||++++  .+...+...
T Consensus       106 ~~lvmE~L~~~~~~~~~l~~~  126 (392)
T d2pula1         106 AVTVMEDLSHLKIARKGLIEG  126 (392)
T ss_dssp             TEEEECCCTTSEEHHHHHHHT
T ss_pred             CEEEEeccCCcccchhhhccc
Confidence            6789999987  455555443

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=89.72  E-value=0.44  Score=42.58  Aligned_cols=100  Identities=9%  Similarity=0.030  Sum_probs=66.8

Q ss_pred             EeccCC-ceEEEEEEECCCCcEEEEEEEecChhhHHHHHHHHHHHHHhcccCCCCCCCeeEeEeEEEeCCEEEEEEecCC
Q 008813          421 YLGSAA-FSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCELLR  499 (552)
Q Consensus       421 ~LGkG~-FG~VykA~Dkktg~~VAVKIIk~sk~~~~~~lrEIkILk~L~hhd~~d~pnIVrL~d~F~~~~hLyIVmEll~  499 (552)
                      .+..|. -+.||+... ..+..+.+|+-....  ...+..|+.+|+.|..+   + -.+++++.+....+..++||+++.
T Consensus        17 ~~~~G~s~~~v~r~~~-~~~~~~vlK~~~~~~--~~~l~~E~~~l~~L~~~---g-vpvP~v~~~~~~~~~~~~v~~~i~   89 (255)
T d1nd4a_          17 QQTIGCSDAAVFRLSA-QGRPVLFVKTDLSGA--LNELQDEAARLSWLATT---G-VPCAAVLDVVTEAGRDWLLLGEVP   89 (255)
T ss_dssp             ECSCTTSSCEEEEEEC-TTSCCEEEEEECSCT--TSCHHHHHHHHHHHHTT---T-CCBCCEEEEEECSSCEEEEEECCS
T ss_pred             EcCCcccCCeEEEEEe-CCCCEEEEEeCCccC--HhHHHHHHHHHHHHHhc---C-CCCCceeeecccccceEEEEEeee
Confidence            334444 367898865 356668889876542  24567899999988763   1 236778888788888999999998


Q ss_pred             C-CHHHHHHhhccCCCCcCCCHHHHHHHHHHHHHHHHHHHhCC
Q 008813          500 A-NLYEFQKFNQESGGEAYFTLGRLQVCSTFLLTLLMLIFLLL  541 (552)
Q Consensus       500 G-sL~d~Lk~~~~~g~~~pLSe~~I~~Ia~QIL~AL~YLHs~g  541 (552)
                      | ++.+.     .      ++..   .++.++...|.-||+..
T Consensus        90 G~~~~~~-----~------~~~~---~~~~~l~~~la~LH~~~  118 (255)
T d1nd4a_          90 GQDLLSS-----H------LAPA---EKVSIMADAMRRLHTLD  118 (255)
T ss_dssp             SEETTTS-----C------CCHH---HHHHHHHHHHHHHTTSC
T ss_pred             ccccccc-----c------ccHH---HHHHHHHHHHHHHccCC
Confidence            8 55331     0      3322   23567778888888654