Your job contains 1 sequence.
>008816
MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK
WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDYSDFDEMFRQLRKEA
EARAEELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGGSANDDGDSDNMRGRKLEN
GHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKLQKLRNKGGKKTDTVVSKGSNPDP
KKKITKKNRVWDDSPPESKLDFTDPAGGNGSNIEVEAADHGESMMDKEEVFSSDSESEED
EEVGKHNKPDAKKTGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVAEEIAEKLC
ESVAASLEGKKLASFTRISSIVQAAMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVF
VGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEK
DPAIVAKEAIQEATRNGSDVVLVDTAGRMQVIIEYYLFLLHIYLHTVCEHFVNIITFRGM
WSFDCLKRKEAK
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 008816
(552 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2118701 - symbol:AT4G30600 species:3702 "Arabi... 1675 2.4e-172 1
DICTYBASE|DDB_G0277377 - symbol:srpR "signal recognition ... 530 2.0e-75 2
UNIPROTKB|F1NXV4 - symbol:SRPR "Uncharacterized protein" ... 556 4.7e-70 2
FB|FBgn0010391 - symbol:Gtp-bp "GTP-binding protein" spec... 527 3.3e-69 2
MGI|MGI:1914648 - symbol:Srpr "signal recognition particl... 530 4.7e-68 2
RGD|1311504 - symbol:Srpr "signal recognition particle re... 522 3.3e-67 2
UNIPROTKB|F1MNJ2 - symbol:SRPR "Signal recognition partic... 510 6.1e-66 2
UNIPROTKB|Q3MHE8 - symbol:SRPR "Signal recognition partic... 510 6.1e-66 2
UNIPROTKB|F1S754 - symbol:SRPR "Uncharacterized protein" ... 504 2.6e-65 2
UNIPROTKB|P08240 - symbol:SRPR "Signal recognition partic... 501 5.4e-65 2
ZFIN|ZDB-GENE-030219-11 - symbol:srpr "signal recognition... 527 2.9e-64 2
UNIPROTKB|P06625 - symbol:SRPR "Signal recognition partic... 492 4.8e-64 2
UNIPROTKB|F1PLH3 - symbol:SRPR "Signal recognition partic... 500 4.2e-61 2
WB|WBGene00009521 - symbol:F38A1.8 species:6239 "Caenorha... 502 6.9e-61 2
UNIPROTKB|J9NTJ9 - symbol:SRPR "Signal recognition partic... 500 4.8e-60 2
UNIPROTKB|J9P788 - symbol:SRPR "Signal recognition partic... 500 9.0e-56 2
ASPGD|ASPL0000006202 - symbol:AN6627 species:162425 "Emer... 421 1.7e-54 3
POMBASE|SPBC3B9.03 - symbol:SPBC3B9.03 "signal recognitio... 436 1.8e-48 2
SGD|S000002700 - symbol:SRP101 "Signal recognition partic... 337 5.4e-30 2
CGD|CAL0003010 - symbol:orf19.3952 species:5476 "Candida ... 323 5.1e-27 1
TIGR_CMR|VC_0147 - symbol:VC_0147 "signal recognition par... 201 2.7e-13 1
TIGR_CMR|GSU_0642 - symbol:GSU_0642 "signal recognition p... 200 5.3e-13 1
TIGR_CMR|APH_1227 - symbol:APH_1227 "signal recognition p... 194 5.5e-13 1
TIGR_CMR|CBU_0450 - symbol:CBU_0450 "signal recognition p... 190 7.3e-12 1
TIGR_CMR|CJE_1340 - symbol:CJE_1340 "signal recognition p... 183 8.0e-12 1
TIGR_CMR|NSE_0545 - symbol:NSE_0545 "signal recognition p... 182 1.6e-11 1
TIGR_CMR|BA_3985 - symbol:BA_3985 "signal recognition par... 175 2.5e-11 2
TIGR_CMR|APH_0349 - symbol:APH_0349 "signal recognition p... 184 3.2e-11 1
UNIPROTKB|P10121 - symbol:ftsY "SRP receptor" species:833... 184 4.0e-11 1
TAIR|locus:2150620 - symbol:CPSRP54 "chloroplast signal r... 183 6.5e-11 1
TIGR_CMR|CBU_1903 - symbol:CBU_1903 "signal recognition p... 176 1.0e-10 1
UNIPROTKB|Q97QH0 - symbol:ftsY "Signal recognition partic... 179 1.0e-10 1
TIGR_CMR|BA_3983 - symbol:BA_3983 "signal recognition par... 179 1.2e-10 1
TIGR_CMR|CHY_1442 - symbol:CHY_1442 "signal recognition p... 174 1.3e-10 1
UNIPROTKB|Q2T9U1 - symbol:SRP54 "Signal recognition parti... 179 1.5e-10 1
UNIPROTKB|P61010 - symbol:SRP54 "Signal recognition parti... 179 1.5e-10 1
UNIPROTKB|P61011 - symbol:SRP54 "Signal recognition parti... 179 1.5e-10 1
UNIPROTKB|F2Z5M9 - symbol:SRP54 "Uncharacterized protein"... 179 1.5e-10 1
UNIPROTKB|Q4R965 - symbol:SRP54 "Signal recognition parti... 179 1.5e-10 1
UNIPROTKB|Q5R4R6 - symbol:SRP54 "Signal recognition parti... 179 1.5e-10 1
RGD|2323636 - symbol:Fam177a1 "family with sequence simil... 178 1.8e-10 1
RGD|621390 - symbol:Srp54 "signal recognition particle 54... 178 1.9e-10 1
ZFIN|ZDB-GENE-040426-818 - symbol:srp54 "signal recogniti... 178 1.9e-10 1
TIGR_CMR|ECH_1111 - symbol:ECH_1111 "signal recognition p... 171 3.2e-10 1
UNIPROTKB|E1C6G6 - symbol:SRP54 "Uncharacterized protein"... 175 4.0e-10 1
TIGR_CMR|CHY_1434 - symbol:CHY_1434 "signal recognition p... 172 6.8e-10 1
TIGR_CMR|CPS_4073 - symbol:CPS_4073 "signal recognition p... 172 7.3e-10 1
TIGR_CMR|SPO_1339 - symbol:SPO_1339 "signal recognition p... 170 8.4e-10 1
TIGR_CMR|SO_4586 - symbol:SO_4586 "signal recognition par... 172 8.8e-10 1
POMBASE|SPCC188.06c - symbol:srp54 "signal recognition pa... 172 9.2e-10 1
UNIPROTKB|Q97QD2 - symbol:ffh "Signal recognition particl... 172 9.3e-10 1
UNIPROTKB|P66842 - symbol:ftsY "Signal recognition partic... 170 1.0e-09 1
NCBI_NP|NP_355632.2 - symbol:ffh "signal recognition part... 171 1.2e-09 1
TIGR_CMR|CJE_0809 - symbol:CJE_0809 "signal recognition p... 168 1.9e-09 1
UNIPROTKB|O07347 - symbol:ffh "Signal recognition particl... 166 2.9e-09 1
TIGR_CMR|SO_1356 - symbol:SO_1356 "signal recognition par... 166 3.3e-09 1
DICTYBASE|DDB_G0275455 - symbol:srp54 "signal recognition... 167 3.5e-09 1
TAIR|locus:2037803 - symbol:ATHSRP54A "signal recognition... 165 4.7e-09 1
SGD|S000006292 - symbol:SRP54 "Signal recognition particl... 164 7.5e-09 1
FB|FBgn0010747 - symbol:Srp54k "Signal recognition partic... 164 8.2e-09 1
TIGR_CMR|CPS_0157 - symbol:CPS_0157 "signal recognition p... 161 1.3e-08 1
UNIPROTKB|P83749 - symbol:ftsY "Signal recognition partic... 156 1.6e-08 1
WB|WBGene00009012 - symbol:F21D5.7 species:6239 "Caenorha... 159 2.3e-08 1
UNIPROTKB|P0AGD7 - symbol:ffh species:83333 "Escherichia ... 156 4.2e-08 1
TAIR|locus:2028563 - symbol:AT1G48900 species:3702 "Arabi... 155 6.3e-08 1
TIGR_CMR|GSU_1132 - symbol:GSU_1132 "signal recognition p... 149 1.5e-07 1
UNIPROTKB|G3V4F7 - symbol:SRP54 "Signal recognition parti... 149 2.4e-07 1
CGD|CAL0003314 - symbol:SRP54 species:5476 "Candida albic... 149 3.5e-07 1
UNIPROTKB|P66844 - symbol:ffh "Signal recognition particl... 147 5.3e-07 1
TIGR_CMR|SPO_3246 - symbol:SPO_3246 "signal recognition p... 144 1.1e-06 1
TIGR_CMR|VC_0560 - symbol:VC_0560 "signal recognition par... 141 1.9e-06 1
TIGR_CMR|ECH_0475 - symbol:ECH_0475 "signal recognition p... 136 6.6e-06 1
GENEDB_PFALCIPARUM|PF14_0477 - symbol:PF14_0477 "signal r... 135 1.0e-05 1
UNIPROTKB|Q8IKX4 - symbol:PF14_0477 "Signal recognition p... 135 1.0e-05 1
TAIR|locus:2157809 - symbol:AT5G49500 "AT5G49500" species... 132 2.2e-05 1
UNIPROTKB|Q722L6 - symbol:LMOf2365_0717 "Putative flagell... 121 0.00025 1
TIGR_CMR|CJE_0061 - symbol:CJE_0061 "flagellar biosynthet... 119 0.00055 1
>TAIR|locus:2118701 [details] [associations]
symbol:AT4G30600 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003924 "GTPase
activity" evidence=IEA] [GO:0005047 "signal recognition particle
binding" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005786 "signal
recognition particle, endoplasmic reticulum targeting"
evidence=ISS] [GO:0006184 "GTP catabolic process" evidence=IEA]
[GO:0006605 "protein targeting" evidence=ISS] [GO:0006614
"SRP-dependent cotranslational protein targeting to membrane"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IDA]
[GO:0006623 "protein targeting to vacuole" evidence=RCA]
[GO:0006944 "cellular membrane fusion" evidence=RCA] [GO:0016192
"vesicle-mediated transport" evidence=RCA] [GO:0048193 "Golgi
vesicle transport" evidence=RCA] InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR007222 InterPro:IPR011012
InterPro:IPR013822 Pfam:PF00448 Pfam:PF02881 Pfam:PF04086
PROSITE:PS00300 SMART:SM00382 SMART:SM00962 GO:GO:0005525
GO:GO:0005783 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003924
EMBL:AL161577 SUPFAM:SSF64356 eggNOG:COG0552 GO:GO:0006614
SUPFAM:SSF47364 KO:K13431 GO:GO:0005785 GO:GO:0005047
HOGENOM:HOG000201671 OMA:LILWSSC EMBL:AY065066 EMBL:AY133612
IPI:IPI00534083 PIR:A85358 RefSeq:NP_194789.1 UniGene:At.4581
HSSP:P83749 ProteinModelPortal:Q9M0A0 SMR:Q9M0A0 STRING:Q9M0A0
PaxDb:Q9M0A0 PRIDE:Q9M0A0 EnsemblPlants:AT4G30600.1 GeneID:829183
KEGG:ath:AT4G30600 TAIR:At4g30600 InParanoid:Q9M0A0
PhylomeDB:Q9M0A0 ProtClustDB:CLSN2685629 ArrayExpress:Q9M0A0
Genevestigator:Q9M0A0 Uniprot:Q9M0A0
Length = 634
Score = 1675 (594.7 bits), Expect = 2.4e-172, P = 2.4e-172
Identities = 355/525 (67%), Positives = 393/525 (74%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
MLEQLLIFTRGGLILWTCKE+GNALKGSPIDTLIRSCLLEERSG SFNYD+ GAAYTLK
Sbjct: 1 MLEQLLIFTRGGLILWTCKEIGNALKGSPIDTLIRSCLLEERSGAVSFNYDAPGAAYTLK 60
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDYSDFDEMFRQXXXXX 120
WTFHN+LGLVFVAVYQRILHLLYVDDLL+M+KQSFSE+YDPKR Y DFDE FRQ
Sbjct: 61 WTFHNDLGLVFVAVYQRILHLLYVDDLLSMVKQSFSEVYDPKRMAYDDFDETFRQLRIEA 120
Query: 121 XXXXXXXXXSKQVTKPMNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMRGR--KL 178
+KQV KP+ + + + L
Sbjct: 121 EARAEELRKTKQVGKPVTSVKKQGQVSKPGLEGGNKRVSSEGGSKKDDGDGGNKAKVSTL 180
Query: 179 ENGHSNVGNVEIEE-SRVTG-VANGKENTSSNIGAFDVSKLQKLRNKG--GK----KTDT 230
NGHSN GN ++E+ S+ T +ANGKENTSSN+ A D+SKLQKLR+KG G+ KTD+
Sbjct: 181 TNGHSN-GNHQMEDDSQETNDLANGKENTSSNV-AVDLSKLQKLRSKGVRGRGGVRKTDS 238
Query: 231 VVSKGSN-PDPKKKITKKNRVWDDSPP-ESKLDFTDPAGGNGSN--IEVEAADHGESMMD 286
+ +K S +P KK TKKNRVWDD+ P +SKLDFTD NG+N +++ AAD GESMMD
Sbjct: 239 IGNKSSKVAEPAKKATKKNRVWDDAAPKQSKLDFTDSIDENGNNDHVDIVAADQGESMMD 298
Query: 287 KXXXXXXXXXXXXXXXXGKHNKP-DAKKTGWFSSMFQSIAGKANLDKADLEPALKALKDR 345
K G KP AKK GWFSS+FQSI GKANL++ DL PALKALK+R
Sbjct: 299 KEEVFSSDSESEDDDEPGSDEKPAQAKKKGWFSSVFQSITGKANLERTDLGPALKALKER 358
Query: 346 LMTKNVAEEIAEKLCESVAASLEGKKLASFTRISSIVQAAMEEALVRILTPRRSIDILRD 405
LMTKNVAEEIAEKLCESV ASLEGKKL+SFTRISS VQAAME+ALVRILTPRRSIDILRD
Sbjct: 359 LMTKNVAEEIAEKLCESVEASLEGKKLSSFTRISSTVQAAMEDALVRILTPRRSIDILRD 418
Query: 406 VHAAKEQRKPYXXXXXXXXXXXKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTH 465
VHAAKEQRKPY KSTNLAKVAYWL QHKVSVMMAACDTFRSGAVEQLRTH
Sbjct: 419 VHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLQQHKVSVMMAACDTFRSGAVEQLRTH 478
Query: 466 ARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQ 510
ARRLQ+PIFEKGYEKDPA+VAKEAIQEATRNGSDVVLVDTAGRMQ
Sbjct: 479 ARRLQIPIFEKGYEKDPAVVAKEAIQEATRNGSDVVLVDTAGRMQ 523
>DICTYBASE|DDB_G0277377 [details] [associations]
symbol:srpR "signal recognition particle receptor
alpha subunit" species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0006614 "SRP-dependent
cotranslational protein targeting to membrane" evidence=IEA]
[GO:0006184 "GTP catabolic process" evidence=IEA] [GO:0005785
"signal recognition particle receptor complex" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0005047 "signal
recognition particle binding" evidence=IEA;ISS] [GO:0003924 "GTPase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0045047 "protein targeting to ER" evidence=ISS]
[GO:0005789 "endoplasmic reticulum membrane" evidence=IEA;ISS]
[GO:0016020 "membrane" evidence=IEA] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR000897 InterPro:IPR003593
InterPro:IPR007222 InterPro:IPR011012 InterPro:IPR013822
Pfam:PF00448 Pfam:PF02881 Pfam:PF04086 PROSITE:PS00300
SMART:SM00382 SMART:SM00962 dictyBase:DDB_G0277377 GO:GO:0005525
GO:GO:0005789 GO:GO:0003924 GenomeReviews:CM000151_GR
EMBL:AAFI02000019 SUPFAM:SSF64356 eggNOG:COG0552 GO:GO:0006614
SUPFAM:SSF47364 GO:GO:0045047 GO:GO:0005785 GO:GO:0005047
HSSP:P08240 RefSeq:XP_642799.1 ProteinModelPortal:Q54ZR7
STRING:Q54ZR7 EnsemblProtists:DDB0252680 GeneID:8620992
KEGG:ddi:DDB_G0277377 OMA:LILWSSC ProtClustDB:CLSZ2846855
Uniprot:Q54ZR7
Length = 615
Score = 530 (191.6 bits), Expect = 2.0e-75, Sum P(2) = 2.0e-75
Identities = 129/340 (37%), Positives = 185/340 (54%)
Query: 176 RKLENGHSNVGNVEIEE-SRVTGVANGKENTSSNIGAF--DVSKLQKLRNKGGKKTDTVV 232
R+ +N +N+ ++ ++ S + ++G ++ ++ GA + + ++ N G KK V
Sbjct: 180 RRKQNKANNINDISSDDDSDDSDSSSGSDSEENSNGATKNQQTDVARIENSGYKKK---V 236
Query: 233 SKGSNPDPKKKITKKNRVWDDSPPESK-LDFTDPA-GGNGSNIEVEAADHGESMMDKXXX 290
+ KK R W+D K L+ + + NG+ I E MD
Sbjct: 237 KDTPDKQASSSTGKKARTWEDGKLSKKELEALNRSDNSNGTEIVREKIQKFNIDMD---- 292
Query: 291 XXXXXXXXXXXXXGKHNKPDAKKTGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKN 350
++ +AK F F + G +DK DLEP L K L KN
Sbjct: 293 ---------VSSSDDDDEEEAKPVSGFMKYFNVLTGNRVIDKQDLEPILADFKLHLTKKN 343
Query: 351 VAEEIAEKLCESVAASLEGKKLASFTRISSIVQAAMEEALVRILTPRRSIDILRDVHAAK 410
VA ++A+K+ +S+ LEGKKLA+F ++S+V+ ME+ + RILTP+R+IDILR+V A K
Sbjct: 344 VAPDVADKIVQSIGTGLEGKKLATFQGVTSVVKQQMEDTITRILTPKRNIDILREVQAVK 403
Query: 411 EQRKPYXXXXXXXXXXXKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQ 470
+R PY KSTNLAKV YWL + M+AACDTFRSGA+EQL+THA RL
Sbjct: 404 GKR-PYSIVFSGVNGVGKSTNLAKVCYWLTANGYKCMLAACDTFRSGAIEQLKTHADRLN 462
Query: 471 VPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQ 510
V +FE+GY KD A VA++AI A G DVVL+DT GRMQ
Sbjct: 463 VHLFERGYSKDAASVAQDAIAFAKDTGYDVVLIDTTGRMQ 502
Score = 249 (92.7 bits), Expect = 2.0e-75, Sum P(2) = 2.0e-75
Identities = 54/112 (48%), Positives = 74/112 (66%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
ML+ I T+GG++LW+ KE +KGSPI++LI+ LLEERS SF DS Y+LK
Sbjct: 1 MLDSFTILTKGGIVLWS-KEFAK-IKGSPINSLIKKVLLEERSAETSFQIDS----YSLK 54
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDP---KRTDYSDF 109
WTF NE L+FV VYQ+I LLY+++LL +K+ F ++Y K + SDF
Sbjct: 55 WTFSNEFDLIFVVVYQKIFTLLYIEELLTTVKKRFIKMYKDLLLKLKESSDF 106
Score = 37 (18.1 bits), Expect = 1.4e-17, Sum P(2) = 1.4e-17
Identities = 14/71 (19%), Positives = 27/71 (38%)
Query: 208 NIGAFDVSKLQKLRNKGGKKTDTVVSKGSNPDPKKKITKKNRVWDDSPPESKLDFTDPAG 267
N A +++K++ K +K + + N + DDS S D + +
Sbjct: 155 NERAIKEGRVEKVKRKEQEKKEKAERRKQNKANNINDISSDDDSDDSDSSSGSDSEENSN 214
Query: 268 GNGSNIEVEAA 278
G N + + A
Sbjct: 215 GATKNQQTDVA 225
>UNIPROTKB|F1NXV4 [details] [associations]
symbol:SRPR "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003924 "GTPase activity" evidence=IEA] [GO:0005047
"signal recognition particle binding" evidence=IEA] [GO:0005525
"GTP binding" evidence=IEA] [GO:0005785 "signal recognition
particle receptor complex" evidence=IEA] [GO:0006614 "SRP-dependent
cotranslational protein targeting to membrane" evidence=IEA]
InterPro:IPR000897 InterPro:IPR003593 InterPro:IPR007222
InterPro:IPR011012 InterPro:IPR013822 Pfam:PF00448 Pfam:PF02881
Pfam:PF04086 PROSITE:PS00300 SMART:SM00382 SMART:SM00962
SMART:SM00963 GO:GO:0005525 GO:GO:0003924 SUPFAM:SSF64356
GO:GO:0006614 SUPFAM:SSF47364 GO:GO:0005785 GO:GO:0005047
OMA:LILWSSC GeneTree:ENSGT00550000074936 EMBL:AADN02042027
IPI:IPI00593518 Ensembl:ENSGALT00000001579 Uniprot:F1NXV4
Length = 644
Score = 556 (200.8 bits), Expect = 4.7e-70, Sum P(2) = 4.7e-70
Identities = 141/364 (38%), Positives = 195/364 (53%)
Query: 174 RGRKLENGHS-NVGNVEIEESRVTGVANGKEN-TSSNIGAFDVSKLQKLRNKGGKKTDTV 231
+G K E + N + + A KE T I + + K K G+K+
Sbjct: 173 KGSKKEGNEAVTASNKTAPGEKQSSAAGDKEELTKDEILQKNREEFFKRHMKAGEKS--- 229
Query: 232 VSKGSNPDPKKKITKKNRVWDDSPPESK-LDFTDPA-GGNGSNIEVEAADHGESMMDKXX 289
SK PD +K+ KK RVWD +K LD+++ GN +E D ++ D+
Sbjct: 230 -SKSPKPDAQKEKGKKPRVWDLGNSNAKVLDYSNSTTNGNSEASPMEDFDPDMALRDRNR 288
Query: 290 X--------XXXXXXXXXXXXXGKHNKPDAKK--TGWFSSMFQSIAGKANLDKADLEPAL 339
+KP KK G M + + G +L + D++P L
Sbjct: 289 EPGRLYDLEYESDEEAEEEKIIQNTSKPSTKKGGLGGMFGMLKGLVGSKSLTRQDMDPVL 348
Query: 340 KALKDRLMTKNVAEEIAEKLCESVAASLEGKKLASFTRISSIVQAAMEEALVRILTPRRS 399
+ +KD L+ KNVA EIA +LCESVA LEGK + +FT ++S V+ A++EALV+IL P+R
Sbjct: 349 EKMKDHLIAKNVAAEIAVQLCESVAKKLEGKVMGTFTTVTSTVKQALQEALVQILQPQRR 408
Query: 400 IDILRDVHAAKEQRKPYXXXXXXXXXXXKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAV 459
+D+LRDV A+ R+PY KSTNLAK+++WL+++ SV++AACDTFR+GAV
Sbjct: 409 VDVLRDVMDAQRHRRPYVVTFCGVNGVGKSTNLAKISFWLIENGFSVLIAACDTFRAGAV 468
Query: 460 EQLRTHARRLQ-------------VPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTA 506
EQLRTH RRL V ++EKGY KD A +A EAI A G DVVLVDTA
Sbjct: 469 EQLRTHTRRLNALHPPESHGGRTMVQLYEKGYGKDAAGIAMEAISYARNQGFDVVLVDTA 528
Query: 507 GRMQ 510
GRMQ
Sbjct: 529 GRMQ 532
Score = 172 (65.6 bits), Expect = 4.7e-70, Sum P(2) = 4.7e-70
Identities = 42/101 (41%), Positives = 62/101 (61%)
Query: 1 MLEQLLIFTRGGLILWTCKEL-GNALKGS-PIDTLIRSCLLEERSGLASFNYDSAGAAYT 58
ML+ IF++GGL+LW + + G A + P++ LIRS LL+ER G SF ++ A T
Sbjct: 1 MLDFFTIFSKGGLVLWCFQGVRGPASAATAPVNALIRSVLLQERGGNNSFTHE----ALT 56
Query: 59 LKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIY 99
LK+ N+ LVFV +Q+IL L YVD L+ + + F + Y
Sbjct: 57 LKYKLDNQFELVFVVGFQKILTLTYVDKLIDDVHKEFRDKY 97
Score = 37 (18.1 bits), Expect = 8.4e-09, Sum P(2) = 8.4e-09
Identities = 8/22 (36%), Positives = 11/22 (50%)
Query: 216 KLQKLRNKGGKKTDTVVSKGSN 237
K++ +NKG KK SN
Sbjct: 166 KVKNKKNKGSKKEGNEAVTASN 187
>FB|FBgn0010391 [details] [associations]
symbol:Gtp-bp "GTP-binding protein" species:7227 "Drosophila
melanogaster" [GO:0003729 "mRNA binding" evidence=NAS] [GO:0005789
"endoplasmic reticulum membrane" evidence=IDA] [GO:0007409
"axonogenesis" evidence=IEP] [GO:0050708 "regulation of protein
secretion" evidence=IEP] [GO:0005785 "signal recognition particle
receptor complex" evidence=ISS] [GO:0005047 "signal recognition
particle binding" evidence=ISS] [GO:0005525 "GTP binding"
evidence=IEA;NAS] [GO:0006184 "GTP catabolic process" evidence=IEA]
[GO:0006614 "SRP-dependent cotranslational protein targeting to
membrane" evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0005811 "lipid particle" evidence=IDA] InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR007222 InterPro:IPR011012
InterPro:IPR013822 Pfam:PF00448 Pfam:PF02881 Pfam:PF04086
PROSITE:PS00300 SMART:SM00382 SMART:SM00962 SMART:SM00963
GO:GO:0005525 GO:GO:0005789 GO:GO:0005811 EMBL:AE014298
GO:GO:0003924 GO:GO:0003723 GO:GO:0007409 GO:GO:0050708
SUPFAM:SSF64356 eggNOG:COG0552 GO:GO:0006614 SUPFAM:SSF47364
KO:K13431 GO:GO:0005785 GO:GO:0005047 OMA:LILWSSC EMBL:AY061329
EMBL:S65640 RefSeq:NP_524887.2 UniGene:Dm.129
ProteinModelPortal:Q9U5L1 SMR:Q9U5L1 IntAct:Q9U5L1 MINT:MINT-765133
STRING:Q9U5L1 PaxDb:Q9U5L1 EnsemblMetazoa:FBtr0073480 GeneID:47251
KEGG:dme:Dmel_CG2522 CTD:47251 FlyBase:FBgn0010391
GeneTree:ENSGT00550000074936 InParanoid:Q9U5L1 OrthoDB:EOG4W0VV7
PhylomeDB:Q9U5L1 GenomeRNAi:47251 NextBio:838983 Bgee:Q9U5L1
GermOnline:CG2522 Uniprot:Q9U5L1
Length = 614
Score = 527 (190.6 bits), Expect = 3.3e-69, Sum P(2) = 3.3e-69
Identities = 137/330 (41%), Positives = 185/330 (56%)
Query: 205 TSSNIGAFDVSKLQKLRNK--GGKKTDTVVSKGSNPDPKKKITKKNRVWD---DSPPESK 259
T S + + K +KLR K KKT SK S P+ K KK RVWD +S +
Sbjct: 177 TGSPMDKIIMEKRRKLREKLTPTKKTSPSDSKSSKPE---KAGKKPRVWDLGGNSKDAAL 233
Query: 260 LDFT--DPAGGNGSNIEVEAADHGESMM-DKXXXXXXXXXXXXXXXXGK-HNKPDAKK-- 313
LD + P NI E + ++ D G+ + +KK
Sbjct: 234 LDRSRDSPDDVQYQNINSELVGTMQGVIRDLDVESEDEADNEDASSEGEAEEQVQSKKGK 293
Query: 314 TGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLA 373
G S F+ I G + ADL+PAL+ ++D L++KNVA EIA KLC+SVAASL+GK++
Sbjct: 294 RGGLLSYFKGIVGAKTMSLADLQPALEKMRDHLISKNVASEIAAKLCDSVAASLDGKQMG 353
Query: 374 SFTRISSIVQAAMEEALVRILTPRRSIDILRDVHAAKEQRKPYXXXXXXXXXXXKSTNLA 433
+F I+S V+ A+ E+LVRIL+P+R IDI+RD +K +PY KSTNLA
Sbjct: 354 TFDSIASQVKEALTESLVRILSPKRRIDIIRDALESKRNGRPYTIIFCGVNGVGKSTNLA 413
Query: 434 KVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQ-------------VPIFEKGYEK 480
K+ +WL+++ +V++AACDTFR+GAVEQLRTH R L V ++EKGY K
Sbjct: 414 KICFWLIENDFNVLIAACDTFRAGAVEQLRTHTRHLNALHPAAKHDGRNMVQLYEKGYGK 473
Query: 481 DPAIVAKEAIQEATRNGSDVVLVDTAGRMQ 510
D A +A EAI+ A DVVLVDTAGRMQ
Sbjct: 474 DAAGIAMEAIKFAHDTRVDVVLVDTAGRMQ 503
Score = 193 (73.0 bits), Expect = 3.3e-69, Sum P(2) = 3.3e-69
Identities = 46/116 (39%), Positives = 71/116 (61%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
ML+ ++IFT+GG++LW GN+ S I++LIR +LEER+ A + Y+ A K
Sbjct: 1 MLDFVVIFTKGGVVLWHSNASGNSF-ASCINSLIRGVILEERNTEAKY-YEEDHLAVQFK 58
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIY-DPKRTDYSDFDEMFRQ 115
NEL LV+ A++Q+++ L Y+D LA M+ +F E Y D + D DFD +R+
Sbjct: 59 --LDNELDLVYAAIFQKVIKLNYLDGFLADMQAAFKEKYGDIRLGDDYDFDREYRR 112
Score = 52 (23.4 bits), Expect = 9.4e-13, Sum P(2) = 9.4e-13
Identities = 16/54 (29%), Positives = 25/54 (46%)
Query: 216 KLQKLRNKGGKKTDTVVSKGSNPDPKKKITKKNRVWDDSPPESKLDFTDPAGGN 269
K + N+ K TV S D KK + K+ + ++PP SK + P G+
Sbjct: 129 KTMRSYNESQKSKKTVASMIQ--DDKKPVEKRVNI-QEAPPPSKSQPSSPPTGS 179
>MGI|MGI:1914648 [details] [associations]
symbol:Srpr "signal recognition particle receptor ('docking
protein')" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0005047 "signal recognition particle binding" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0005785 "signal recognition particle
receptor complex" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=IEA] [GO:0006614 "SRP-dependent cotranslational protein
targeting to membrane" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR000897 InterPro:IPR003593 InterPro:IPR007222
InterPro:IPR011012 InterPro:IPR013822 Pfam:PF00448 Pfam:PF02881
Pfam:PF04086 PROSITE:PS00300 SMART:SM00382 SMART:SM00962
SMART:SM00963 MGI:MGI:1914648 GO:GO:0005525 GO:GO:0003924
SUPFAM:SSF64356 eggNOG:COG0552 GO:GO:0006614 SUPFAM:SSF47364
KO:K13431 GO:GO:0005785 GO:GO:0005047 CTD:6734 HOGENOM:HOG000201671
HOVERGEN:HBG047566 OrthoDB:EOG4W0XCP GeneTree:ENSGT00550000074936
OMA:KEGSDGP EMBL:AK004967 EMBL:AK038017 EMBL:BC012512 EMBL:BC021839
IPI:IPI00119695 RefSeq:NP_080406.1 UniGene:Mm.284688
ProteinModelPortal:Q9DBG7 SMR:Q9DBG7 STRING:Q9DBG7
PhosphoSite:Q9DBG7 PaxDb:Q9DBG7 PRIDE:Q9DBG7
Ensembl:ENSMUST00000034541 GeneID:67398 KEGG:mmu:67398
UCSC:uc009osy.1 InParanoid:Q9DBG7 NextBio:324466 Bgee:Q9DBG7
Genevestigator:Q9DBG7 GermOnline:ENSMUSG00000032042 Uniprot:Q9DBG7
Length = 636
Score = 530 (191.6 bits), Expect = 4.7e-68, Sum P(2) = 4.7e-68
Identities = 136/357 (38%), Positives = 193/357 (54%)
Query: 174 RGRKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKLQKLRNKGGKKTDTVVS 233
RG K E + + + +G++ G EN + K ++ K GK D S
Sbjct: 170 RGAKKEGSDGTLATSKTAPAEKSGLSAGPENGELSKEELIRRKREEFIQKHGKGLDKS-S 228
Query: 234 KGSNPD-PKKKITKKNRVWDDSPPESK--LDFTDPAGGNGSNIEVEAADHGESMMDKXXX 290
K + D PK+K K RVW+ +K LD++ P NG+ + D
Sbjct: 229 KSTKSDTPKEKGKKAPRVWELGGCANKEVLDYSTPTT-NGTPEAALSEDINLIRGTGPGG 287
Query: 291 XXXXXXXXXXXXXG--KHNKPDAKK--TGWFSSMFQSIAGKANLDKADLEPALKALKDRL 346
G ++ KP A K G M + + G +L + D+E L ++D L
Sbjct: 288 QLQDLDCSSSDDEGATQNTKPSATKGTLGGMFGMLKGLVGSKSLSREDMESVLDKMRDHL 347
Query: 347 MTKNVAEEIAEKLCESVAASLEGKKLASFTRISSIVQAAMEEALVRILTPRRSIDILRDV 406
+ KNVA +IA +LCESVA LEGK + +F+ ++S V+ A++E+LV+IL P+R +D+LRD+
Sbjct: 348 IAKNVAADIAVQLCESVANKLEGKVMGTFSTVTSTVKQALQESLVQILQPQRRVDMLRDI 407
Query: 407 HAAKEQRKPYXXXXXXXXXXXKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHA 466
A+ +++PY KSTNLAK+++WLL++ SV++AACDTFR+GAVEQLRTH
Sbjct: 408 MDAQRRQRPYVVTFCGVNGVGKSTNLAKISFWLLENGFSVLIAACDTFRAGAVEQLRTHT 467
Query: 467 RRL-------------QVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQ 510
RRL V +FEKGY KD A +A EAI A G DVVLVDTAGRMQ
Sbjct: 468 RRLTALHPPEKHGGRTMVQLFEKGYGKDAAGIAMEAIAFARNQGFDVVLVDTAGRMQ 524
Score = 179 (68.1 bits), Expect = 4.7e-68, Sum P(2) = 4.7e-68
Identities = 41/99 (41%), Positives = 62/99 (62%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
ML+ IF++GGL+LW + + ++ G P++ LIRS LL+ER G SF ++ A TLK
Sbjct: 1 MLDFFTIFSKGGLVLWCFQGVSDSCTG-PVNALIRSVLLQERGGNNSFTHE----ALTLK 55
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIY 99
+ N+ LVFV +Q+IL L YVD L+ + + F + Y
Sbjct: 56 YKLDNQFELVFVVGFQKILTLTYVDKLIDDVHRLFRDKY 94
>RGD|1311504 [details] [associations]
symbol:Srpr "signal recognition particle receptor ('docking
protein')" species:10116 "Rattus norvegicus" [GO:0003924 "GTPase
activity" evidence=IEA] [GO:0005047 "signal recognition particle
binding" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0005785 "signal recognition particle receptor complex"
evidence=IEA] [GO:0006614 "SRP-dependent cotranslational protein
targeting to membrane" evidence=IEA] InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR007222 InterPro:IPR011012
InterPro:IPR013822 Pfam:PF00448 Pfam:PF02881 Pfam:PF04086
PROSITE:PS00300 SMART:SM00382 SMART:SM00962 SMART:SM00963
RGD:1311504 GO:GO:0005525 GO:GO:0003924 SUPFAM:SSF64356
eggNOG:COG0552 GO:GO:0006614 SUPFAM:SSF47364 KO:K13431
GO:GO:0005785 GO:GO:0005047 CTD:6734 HOGENOM:HOG000201671
HOVERGEN:HBG047566 OrthoDB:EOG4W0XCP GeneTree:ENSGT00550000074936
OMA:KEGSDGP EMBL:BC105782 IPI:IPI00362579 RefSeq:NP_001029322.1
UniGene:Rn.18349 SMR:Q3KRC3 STRING:Q3KRC3
Ensembl:ENSRNOT00000015177 GeneID:315548 KEGG:rno:315548
UCSC:RGD:1311504 InParanoid:Q3KRC3 NextBio:669402
Genevestigator:Q3KRC3 Uniprot:Q3KRC3
Length = 636
Score = 522 (188.8 bits), Expect = 3.3e-67, Sum P(2) = 3.3e-67
Identities = 135/357 (37%), Positives = 192/357 (53%)
Query: 174 RGRKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKLQKLRNKGGKKTDTVVS 233
+G K E + + + +G+ G EN + K ++ K GK D S
Sbjct: 170 KGSKKEGSDGPLATSKTAPAEKSGLPVGPENGELSKEELIRRKREEFIQKHGKGLDKS-S 228
Query: 234 KGSNPD-PKKKITKKNRVWDDSPPESK--LDFTDPAGGNGSNIEVEAADHGESMMDKXXX 290
K + D PK+K K RVW+ +K LD++ P NG+ + D
Sbjct: 229 KSTKSDIPKEKGKKAPRVWELGGCANKEVLDYSTPTT-NGTPEAALSEDINLIRGTGPGG 287
Query: 291 XXXXXXXXXXXXXG--KHNKPDAKK--TGWFSSMFQSIAGKANLDKADLEPALKALKDRL 346
G ++ KP A K G M + + G +L + D+E L ++D L
Sbjct: 288 QLQDLDCSSSDDEGATQNTKPSATKGTLGGMFGMLKGLVGSKSLSREDMESVLDKMRDHL 347
Query: 347 MTKNVAEEIAEKLCESVAASLEGKKLASFTRISSIVQAAMEEALVRILTPRRSIDILRDV 406
+ KNVA +IA +LCESVA LEGK + +F+ ++S V+ A++E+LV+IL P+R +D+LRD+
Sbjct: 348 IAKNVAADIAVQLCESVANKLEGKVMGTFSTVTSTVKQALQESLVQILQPQRRVDMLRDI 407
Query: 407 HAAKEQRKPYXXXXXXXXXXXKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHA 466
A+ +++PY KSTNLAK+++WLL++ SV++AACDTFR+GAVEQLRTH
Sbjct: 408 MDAQRRQRPYVVTFCGVNGVGKSTNLAKISFWLLENGFSVLIAACDTFRAGAVEQLRTHT 467
Query: 467 RRL-------------QVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQ 510
RRL V +FEKGY KD A +A EAI A G DVVLVDTAGRMQ
Sbjct: 468 RRLTALHPPEKHGGRTMVQLFEKGYGKDAAGIAMEAIAFARNQGFDVVLVDTAGRMQ 524
Score = 179 (68.1 bits), Expect = 3.3e-67, Sum P(2) = 3.3e-67
Identities = 41/99 (41%), Positives = 62/99 (62%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
ML+ IF++GGL+LW + + ++ G P++ LIRS LL+ER G SF ++ A TLK
Sbjct: 1 MLDFFTIFSKGGLVLWCFQGVSDSCTG-PVNALIRSVLLQERGGNNSFTHE----ALTLK 55
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIY 99
+ N+ LVFV +Q+IL L YVD L+ + + F + Y
Sbjct: 56 YKLDNQFELVFVVGFQKILTLTYVDKLIDDVHRLFRDKY 94
>UNIPROTKB|F1MNJ2 [details] [associations]
symbol:SRPR "Signal recognition particle receptor subunit
alpha" species:9913 "Bos taurus" [GO:0006614 "SRP-dependent
cotranslational protein targeting to membrane" evidence=IEA]
[GO:0005785 "signal recognition particle receptor complex"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0005047
"signal recognition particle binding" evidence=IEA] [GO:0003924
"GTPase activity" evidence=IEA] InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR007222 InterPro:IPR011012
InterPro:IPR013822 Pfam:PF00448 Pfam:PF02881 Pfam:PF04086
SMART:SM00382 SMART:SM00962 SMART:SM00963 GO:GO:0005525
GO:GO:0003924 SUPFAM:SSF64356 GO:GO:0006614 SUPFAM:SSF47364
GO:GO:0005785 GO:GO:0005047 IPI:IPI00695733
GeneTree:ENSGT00550000074936 OMA:KEGSDGP EMBL:DAAA02063109
Ensembl:ENSBTAT00000018762 Uniprot:F1MNJ2
Length = 598
Score = 510 (184.6 bits), Expect = 6.1e-66, Sum P(2) = 6.1e-66
Identities = 134/360 (37%), Positives = 188/360 (52%)
Query: 174 RGRKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVS-KLQKLRNKGGKKTDTVV 232
+G K E + + + +G+ G EN + K ++ K G+ +
Sbjct: 171 KGAKKEGSDGPLATSKAAPAEKSGLPVGPENGEELSKEEQIRRKREEFIQKHGRGMEKS- 229
Query: 233 SKGSNPD-PKKKITKKNRVW--DDSPPESKLDFTDPAGGNGSNIEVEAAD----HGESMM 285
SK S D PK+K K RVW S + LD++ P NG+ D G
Sbjct: 230 SKSSKSDAPKEKGKKAPRVWALGGSANKEVLDYSTPTT-NGAPEAAPPEDINLIRGTGP- 287
Query: 286 DKXXXXXXXXXXXXXXXXGKHNKPDAKK--TGWFSSMFQSIAGKANLDKADLEPALKALK 343
+ KP A K G M + + G +L + D+E L ++
Sbjct: 288 GRQLQDLDCSSSDDEGAAQNSTKPSATKGTLGGMFGMLKGLVGSKSLTREDMESVLDKMR 347
Query: 344 DRLMTKNVAEEIAEKLCESVAASLEGKKLASFTRISSIVQAAMEEALVRILTPRRSIDIL 403
D L+ KNVA +IA +LCESVA LEGK + +F+ ++S V+ A++E+LV+IL P+R +D+L
Sbjct: 348 DHLIAKNVAADIAVQLCESVANKLEGKVMGTFSTVTSTVKQALQESLVQILQPQRRVDML 407
Query: 404 RDVHAAKEQRKPYXXXXXXXXXXXKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLR 463
RD+ A+ ++PY KSTNLAK+++WLL++ SV++AACDTFR+GAVEQLR
Sbjct: 408 RDIMDAQRHQRPYVVTFCGVNGVGKSTNLAKISFWLLENGFSVLIAACDTFRAGAVEQLR 467
Query: 464 THARRLQ-------------VPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQ 510
TH RRL V +FEKGY KD A +A EAI A G DVVLVDTAGRMQ
Sbjct: 468 THTRRLSALHPPEKHGGRTMVQLFEKGYGKDAAGIAMEAIAFARNQGFDVVLVDTAGRMQ 527
Score = 179 (68.1 bits), Expect = 6.1e-66, Sum P(2) = 6.1e-66
Identities = 41/99 (41%), Positives = 62/99 (62%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
ML+ IF++GGL+LW + + ++ G P++ LIRS LL+ER G SF ++ A TLK
Sbjct: 1 MLDFFTIFSKGGLVLWCFQGVSDSCTG-PVNALIRSVLLQERGGNNSFTHE----ALTLK 55
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIY 99
+ N+ LVFV +Q+IL L YVD L+ + + F + Y
Sbjct: 56 YKLDNQFELVFVVGFQKILTLTYVDKLIDDVHRLFRDKY 94
Score = 52 (23.4 bits), Expect = 3.2e-11, Sum P(2) = 3.2e-11
Identities = 31/136 (22%), Positives = 51/136 (37%)
Query: 206 SSNIGAFDVSKLQKLRNKGGKKTDTVV-SKGSNPDPKKKITKKNRVWDDSPPESKLDFTD 264
SS I A K + K K +++ ++G P K K KKN+ + L +
Sbjct: 127 SSKIRAPTTMKKFEDSEKAKKPVRSMIETRGEKPKEKAKNNKKNKGAKKEGSDGPLATSK 186
Query: 265 PAGGNGSNIEVEAADHGESMMDKXXXXXXXXXXXXXXXXG-----KHNKPDA-KKTGWFS 318
A S + V ++GE + + G K +K DA K+ G +
Sbjct: 187 AAPAEKSGLPV-GPENGEELSKEEQIRRKREEFIQKHGRGMEKSSKSSKSDAPKEKGKKA 245
Query: 319 SMFQSIAGKANLDKAD 334
++ G AN + D
Sbjct: 246 PRVWALGGSANKEVLD 261
>UNIPROTKB|Q3MHE8 [details] [associations]
symbol:SRPR "Signal recognition particle receptor subunit
alpha" species:9913 "Bos taurus" [GO:0005525 "GTP binding"
evidence=IEA] [GO:0006614 "SRP-dependent cotranslational protein
targeting to membrane" evidence=IEA] [GO:0005785 "signal
recognition particle receptor complex" evidence=IEA] [GO:0005047
"signal recognition particle binding" evidence=IEA] [GO:0003924
"GTPase activity" evidence=IEA] InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR007222 InterPro:IPR011012
InterPro:IPR013822 Pfam:PF00448 Pfam:PF02881 Pfam:PF04086
PROSITE:PS00300 SMART:SM00382 SMART:SM00962 SMART:SM00963
GO:GO:0005525 GO:GO:0003924 SUPFAM:SSF64356 eggNOG:COG0552
GO:GO:0006614 SUPFAM:SSF47364 KO:K13431 GO:GO:0005785 GO:GO:0005047
EMBL:BC105264 IPI:IPI00695733 RefSeq:NP_001068590.1 UniGene:Bt.5518
HSSP:P08240 ProteinModelPortal:Q3MHE8 SMR:Q3MHE8 STRING:Q3MHE8
PRIDE:Q3MHE8 GeneID:281504 KEGG:bta:281504 CTD:6734
HOGENOM:HOG000201671 HOVERGEN:HBG047566 InParanoid:Q3MHE8
OrthoDB:EOG4W0XCP NextBio:20805473 Uniprot:Q3MHE8
Length = 639
Score = 510 (184.6 bits), Expect = 6.1e-66, Sum P(2) = 6.1e-66
Identities = 134/360 (37%), Positives = 188/360 (52%)
Query: 174 RGRKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVS-KLQKLRNKGGKKTDTVV 232
+G K E + + + +G+ G EN + K ++ K G+ +
Sbjct: 171 KGAKKEGSDGPLATSKAAPAEKSGLPVGPENGEELSKEEQIRRKREEFIQKHGRGMEKS- 229
Query: 233 SKGSNPD-PKKKITKKNRVW--DDSPPESKLDFTDPAGGNGSNIEVEAAD----HGESMM 285
SK S D PK+K K RVW S + LD++ P NG+ D G
Sbjct: 230 SKSSKSDAPKEKGKKAPRVWALGGSANKEVLDYSTPTT-NGAPEAAPPEDINLIRGTGP- 287
Query: 286 DKXXXXXXXXXXXXXXXXGKHNKPDAKK--TGWFSSMFQSIAGKANLDKADLEPALKALK 343
+ KP A K G M + + G +L + D+E L ++
Sbjct: 288 GRQLQDLDCSSSDDEGAAQNSTKPSATKGTLGGMFGMLKGLVGSKSLTREDMESVLDKMR 347
Query: 344 DRLMTKNVAEEIAEKLCESVAASLEGKKLASFTRISSIVQAAMEEALVRILTPRRSIDIL 403
D L+ KNVA +IA +LCESVA LEGK + +F+ ++S V+ A++E+LV+IL P+R +D+L
Sbjct: 348 DHLIAKNVAADIAVQLCESVANKLEGKVMGTFSTVTSTVKQALQESLVQILQPQRRVDML 407
Query: 404 RDVHAAKEQRKPYXXXXXXXXXXXKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLR 463
RD+ A+ ++PY KSTNLAK+++WLL++ SV++AACDTFR+GAVEQLR
Sbjct: 408 RDIMDAQRHQRPYVVTFCGVNGVGKSTNLAKISFWLLENGFSVLIAACDTFRAGAVEQLR 467
Query: 464 THARRLQ-------------VPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQ 510
TH RRL V +FEKGY KD A +A EAI A G DVVLVDTAGRMQ
Sbjct: 468 THTRRLSALHPPEKHGGRTMVQLFEKGYGKDAAGIAMEAIAFARNQGFDVVLVDTAGRMQ 527
Score = 179 (68.1 bits), Expect = 6.1e-66, Sum P(2) = 6.1e-66
Identities = 41/99 (41%), Positives = 62/99 (62%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
ML+ IF++GGL+LW + + ++ G P++ LIRS LL+ER G SF ++ A TLK
Sbjct: 1 MLDFFTIFSKGGLVLWCFQGVSDSCTG-PVNALIRSVLLQERGGNNSFTHE----ALTLK 55
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIY 99
+ N+ LVFV +Q+IL L YVD L+ + + F + Y
Sbjct: 56 YKLDNQFELVFVVGFQKILTLTYVDKLIDDVHRLFRDKY 94
Score = 52 (23.4 bits), Expect = 3.9e-11, Sum P(2) = 3.9e-11
Identities = 31/136 (22%), Positives = 51/136 (37%)
Query: 206 SSNIGAFDVSKLQKLRNKGGKKTDTVV-SKGSNPDPKKKITKKNRVWDDSPPESKLDFTD 264
SS I A K + K K +++ ++G P K K KKN+ + L +
Sbjct: 127 SSKIRAPTTMKKFEDSEKAKKPVRSMIETRGEKPKEKAKNNKKNKGAKKEGSDGPLATSK 186
Query: 265 PAGGNGSNIEVEAADHGESMMDKXXXXXXXXXXXXXXXXG-----KHNKPDA-KKTGWFS 318
A S + V ++GE + + G K +K DA K+ G +
Sbjct: 187 AAPAEKSGLPV-GPENGEELSKEEQIRRKREEFIQKHGRGMEKSSKSSKSDAPKEKGKKA 245
Query: 319 SMFQSIAGKANLDKAD 334
++ G AN + D
Sbjct: 246 PRVWALGGSANKEVLD 261
>UNIPROTKB|F1S754 [details] [associations]
symbol:SRPR "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006614 "SRP-dependent cotranslational protein
targeting to membrane" evidence=IEA] [GO:0005785 "signal
recognition particle receptor complex" evidence=IEA] [GO:0005525
"GTP binding" evidence=IEA] [GO:0005047 "signal recognition
particle binding" evidence=IEA] [GO:0003924 "GTPase activity"
evidence=IEA] InterPro:IPR000897 InterPro:IPR003593
InterPro:IPR007222 InterPro:IPR011012 InterPro:IPR013822
Pfam:PF00448 Pfam:PF02881 Pfam:PF04086 PROSITE:PS00300
SMART:SM00382 SMART:SM00962 SMART:SM00963 GO:GO:0005525
GO:GO:0003924 SUPFAM:SSF64356 GO:GO:0006614 SUPFAM:SSF47364
GO:GO:0005785 GO:GO:0005047 GeneTree:ENSGT00550000074936
OMA:KEGSDGP EMBL:CU466237 EMBL:FP102836 EMBL:GACC01000039
Ensembl:ENSSSCT00000016593 Uniprot:F1S754
Length = 638
Score = 504 (182.5 bits), Expect = 2.6e-65, Sum P(2) = 2.6e-65
Identities = 130/360 (36%), Positives = 188/360 (52%)
Query: 174 RGRKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDV--SKLQKLRNKGGKKTDTV 231
+G K E + + + +GV G EN + ++ K ++ K G+ +
Sbjct: 170 KGAKKEGSDGPLATSKAVPTEKSGVPVGPEN-GVELSKEELIRRKREEFIQKHGRGVEKS 228
Query: 232 VSKGSNPDPKKKITKKNRVW--DDSPPESKLDFTDPAGGNGSNIEVEAAD----HGESMM 285
+ PK+K K RVW S + LD++ P NG+ D G
Sbjct: 229 GKSTKSDAPKEKGKKAPRVWALGGSANKEVLDYSTPTT-NGAPEAAPPEDINLIRGTGPG 287
Query: 286 DKXXXXXXXXXXXXXXXXGKHNKPDAKK--TGWFSSMFQSIAGKANLDKADLEPALKALK 343
+ KP + K G M + + G +L + D+E L ++
Sbjct: 288 GQLQDLDCSSSDDEGATQNS-TKPSSTKGTLGGMFGMLKGLVGSKSLSREDMESVLDKMR 346
Query: 344 DRLMTKNVAEEIAEKLCESVAASLEGKKLASFTRISSIVQAAMEEALVRILTPRRSIDIL 403
D L+ KNVA +IA +LCESVA+ LEGK + +F+ ++S V+ A++E+LV+IL P+R +D+L
Sbjct: 347 DHLIAKNVAADIAVQLCESVASKLEGKVMGTFSTVTSTVKQALQESLVQILQPQRRVDML 406
Query: 404 RDVHAAKEQRKPYXXXXXXXXXXXKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLR 463
RD+ A+ ++PY KSTNLAK+++WLL++ SV++AACDTFR+GAVEQLR
Sbjct: 407 RDIMDAQRHQRPYVVTFCGVNGVGKSTNLAKISFWLLENGFSVLIAACDTFRAGAVEQLR 466
Query: 464 THARRLQ-------------VPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQ 510
TH RRL V +FEKGY KD A +A EAI A G DVVLVDTAGRMQ
Sbjct: 467 THTRRLSALHPPENHGGRTMVQLFEKGYGKDAAGIAMEAIAFARNQGFDVVLVDTAGRMQ 526
Score = 179 (68.1 bits), Expect = 2.6e-65, Sum P(2) = 2.6e-65
Identities = 41/99 (41%), Positives = 62/99 (62%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
ML+ IF++GGL+LW + + ++ G P++ LIRS LL+ER G SF ++ A TLK
Sbjct: 1 MLDFFTIFSKGGLVLWCFQGVSDSCTG-PVNALIRSVLLQERGGNNSFTHE----ALTLK 55
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIY 99
+ N+ LVFV +Q+IL L YVD L+ + + F + Y
Sbjct: 56 YKLDNQFELVFVVGFQKILTLTYVDKLIDDVHRLFRDKY 94
>UNIPROTKB|P08240 [details] [associations]
symbol:SRPR "Signal recognition particle receptor subunit
alpha" species:9606 "Homo sapiens" [GO:0003924 "GTPase activity"
evidence=IEA] [GO:0005047 "signal recognition particle binding"
evidence=IEA] [GO:0005785 "signal recognition particle receptor
complex" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=TAS] [GO:0006613
"cotranslational protein targeting to membrane" evidence=TAS]
[GO:0016021 "integral to membrane" evidence=TAS] [GO:0005789
"endoplasmic reticulum membrane" evidence=TAS] [GO:0006412
"translation" evidence=TAS] [GO:0006614 "SRP-dependent
cotranslational protein targeting to membrane" evidence=TAS]
[GO:0006987 "activation of signaling protein activity involved in
unfolded protein response" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0030968 "endoplasmic reticulum
unfolded protein response" evidence=TAS] [GO:0044267 "cellular
protein metabolic process" evidence=TAS] Reactome:REACT_71
Reactome:REACT_17015 InterPro:IPR000897 InterPro:IPR003593
InterPro:IPR007222 InterPro:IPR011012 InterPro:IPR013822
Pfam:PF00448 Pfam:PF02881 Pfam:PF04086 PROSITE:PS00300
SMART:SM00382 SMART:SM00962 SMART:SM00963 GO:GO:0005525
GO:GO:0016021 Reactome:REACT_116125 GO:GO:0006987 EMBL:CH471065
GO:GO:0006412 GO:GO:0003924 SUPFAM:SSF64356 eggNOG:COG0552
GO:GO:0006614 SUPFAM:SSF47364 KO:K13431 GO:GO:0005785 GO:GO:0005047
PDB:2GO5 PDBsum:2GO5 PDB:2FH5 PDBsum:2FH5 CTD:6734
HOGENOM:HOG000201671 HOVERGEN:HBG047566 OrthoDB:EOG4W0XCP
EMBL:X06272 EMBL:AK312377 EMBL:AP001318 EMBL:BC001162 EMBL:BC009110
EMBL:BC013583 IPI:IPI00385267 PIR:A29440 RefSeq:NP_001171313.1
RefSeq:NP_003130.2 UniGene:Hs.368376 ProteinModelPortal:P08240
SMR:P08240 IntAct:P08240 MINT:MINT-1404634 STRING:P08240
PhosphoSite:P08240 DMDM:20455516 PaxDb:P08240 PRIDE:P08240
DNASU:6734 Ensembl:ENST00000332118 GeneID:6734 KEGG:hsa:6734
UCSC:uc001qdh.3 GeneCards:GC11M126132 HGNC:HGNC:11307 MIM:182180
neXtProt:NX_P08240 PharmGKB:PA36131 InParanoid:P08240 OMA:KEGSDGP
ChiTaRS:SRPR EvolutionaryTrace:P08240 GenomeRNAi:6734 NextBio:26272
ArrayExpress:P08240 Bgee:P08240 CleanEx:HS_SRPR
Genevestigator:P08240 GermOnline:ENSG00000182934 Uniprot:P08240
Length = 638
Score = 501 (181.4 bits), Expect = 5.4e-65, Sum P(2) = 5.4e-65
Identities = 132/361 (36%), Positives = 193/361 (53%)
Query: 174 RGRKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDV--SKLQKLRNKGGKKTDTV 231
+G K E + + + +G+ G EN + ++ K ++ K G+ +
Sbjct: 170 KGAKKEGSDGPLATSKPVPAEKSGLPVGPEN-GVELSKEELIRRKREEFIQKHGRGMEKS 228
Query: 232 VSKGSNPD-PKKKITKKNRVWDDSPPESK--LDFTDPAGGNGSNIEVEAAD----HGESM 284
+K + D PK+K K RVW+ +K LD++ P NG+ + D G
Sbjct: 229 -NKSTKSDAPKEKGKKAPRVWELGGCANKEVLDYSTPTT-NGTPEAALSEDINLIRGTGS 286
Query: 285 MDKXXXXXXXXXXXXXXXXGKHNKPDAKK--TGWFSSMFQSIAGKANLDKADLEPALKAL 342
+ KP A K G M + + G +L + D+E L +
Sbjct: 287 GGQLQDLDCSSSDDEGAAQNS-TKPSATKGTLGGMFGMLKGLVGSKSLSREDMESVLDKM 345
Query: 343 KDRLMTKNVAEEIAEKLCESVAASLEGKKLASFTRISSIVQAAMEEALVRILTPRRSIDI 402
+D L+ KNVA +IA +LCESVA LEGK + +F+ ++S V+ A++E+LV+IL P+R +D+
Sbjct: 346 RDHLIAKNVAADIAVQLCESVANKLEGKVMGTFSTVTSTVKQALQESLVQILQPQRRVDM 405
Query: 403 LRDVHAAKEQRKPYXXXXXXXXXXXKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQL 462
LRD+ A+ +++PY KSTNLAK+++WLL++ SV++AACDTFR+GAVEQL
Sbjct: 406 LRDIMDAQRRQRPYVVTFCGVNGVGKSTNLAKISFWLLENGFSVLIAACDTFRAGAVEQL 465
Query: 463 RTHARRLQ-------------VPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRM 509
RTH RRL V +FEKGY KD A +A EAI A G DVVLVDTAGRM
Sbjct: 466 RTHTRRLSALHPPEKHGGRTMVQLFEKGYGKDAAGIAMEAIAFARNQGFDVVLVDTAGRM 525
Query: 510 Q 510
Q
Sbjct: 526 Q 526
Score = 179 (68.1 bits), Expect = 5.4e-65, Sum P(2) = 5.4e-65
Identities = 41/99 (41%), Positives = 62/99 (62%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
ML+ IF++GGL+LW + + ++ G P++ LIRS LL+ER G SF ++ A TLK
Sbjct: 1 MLDFFTIFSKGGLVLWCFQGVSDSCTG-PVNALIRSVLLQERGGNNSFTHE----ALTLK 55
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIY 99
+ N+ LVFV +Q+IL L YVD L+ + + F + Y
Sbjct: 56 YKLDNQFELVFVVGFQKILTLTYVDKLIDDVHRLFRDKY 94
>ZFIN|ZDB-GENE-030219-11 [details] [associations]
symbol:srpr "signal recognition particle receptor
(docking protein)" species:7955 "Danio rerio" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA] [GO:0005785 "signal recognition particle receptor
complex" evidence=IEA] [GO:0006614 "SRP-dependent cotranslational
protein targeting to membrane" evidence=IEA] [GO:0003924 "GTPase
activity" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005047
"signal recognition particle binding" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR007222 InterPro:IPR011012
InterPro:IPR013822 Pfam:PF00448 Pfam:PF02881 Pfam:PF04086
PROSITE:PS00300 SMART:SM00382 SMART:SM00962 SMART:SM00963
ZFIN:ZDB-GENE-030219-11 GO:GO:0005525 GO:GO:0003924 SUPFAM:SSF64356
GO:GO:0006614 SUPFAM:SSF47364 KO:K13431 GO:GO:0005785 GO:GO:0005047
CTD:6734 GeneTree:ENSGT00550000074936 EMBL:CU469519 IPI:IPI00799782
RefSeq:XP_697518.3 UniGene:Dr.79180 Ensembl:ENSDART00000086823
GeneID:569063 KEGG:dre:569063 NextBio:20889487 Uniprot:E7EZW6
Length = 650
Score = 527 (190.6 bits), Expect = 2.9e-64, Sum P(2) = 2.9e-64
Identities = 132/358 (36%), Positives = 199/358 (55%)
Query: 176 RKLENGHSNVGNVEIEESRVTGVAN---G----KENTSSNIGAFDVSKLQKLRNKGGKKT 228
+ +ENG ++ EIE +R ++ G K + S K+ ++ + GGK +
Sbjct: 195 KAVENGSESLTQDEIERNRAKFISKQLGGGKPEKPSKSPKPQGKPKGKVNRVWDMGGKSS 254
Query: 229 DTVVSKGSNPDPKKKITKKNRVWDDSPPESKLDFTDPAGGNGSNIEVEAADHGESMMDKX 288
+ G+N + ++ +D+ E + + G+ ++ E++D + +++
Sbjct: 255 GELDYSGTNGNNSNDAKSED---NDATAEPAIQ-VESMKGDLRGVDYESSDDEDEEVEEE 310
Query: 289 XXXXXXXXXXXXXXXGKHNKPDAKKTGWFSSMF---QSIAGKANLDKADLEPALKALKDR 345
K AK++G F MF + + G NL + D+EP L +KD
Sbjct: 311 EKKVVVTNT---------KKTGAKRSG-FGGMFGMLKGLVGSKNLTQEDMEPVLDKMKDH 360
Query: 346 LMTKNVAEEIAEKLCESVAASLEGKKLASFTRISSIVQAAMEEALVRILTPRRSIDILRD 405
L+ KNVA EIA +LC+SVA LEGK + +FT ++S V+ A++++LV+IL P+R +DILRD
Sbjct: 361 LIAKNVAAEIASQLCDSVAKKLEGKVMGTFTTVASTVKQALQDSLVQILQPKRRVDILRD 420
Query: 406 VHAAKEQRKPYXXXXXXXXXXXKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTH 465
V A+ QRKP+ KSTNLAK++YWL+++ +V++AACDTFR+GAVEQLRTH
Sbjct: 421 VLEARSQRKPFVITFCGVNGVGKSTNLAKISYWLIENGFTVLIAACDTFRAGAVEQLRTH 480
Query: 466 ARRLQ-------------VPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQ 510
RRL V +FEKGY KD A +A EAI A G DVVL+DTAGRMQ
Sbjct: 481 QRRLNSLHPPEKHGGQPAVQLFEKGYGKDAAGIAMEAIAFARNQGFDVVLIDTAGRMQ 538
Score = 146 (56.5 bits), Expect = 2.9e-64, Sum P(2) = 2.9e-64
Identities = 37/101 (36%), Positives = 58/101 (57%)
Query: 1 MLEQLLIFTRGGLILWTCKELG--NALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYT 58
ML+ IF++GG++LW + G + G P++ LIRS +L+ERSG F +++ +
Sbjct: 1 MLDFFAIFSKGGIVLWCFQGAGVTESFTG-PVNALIRSVILQERSGNNFFTHNTL----S 55
Query: 59 LKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIY 99
LK+ NE LVFV +Q L L YVD + ++ F + Y
Sbjct: 56 LKYKLDNEFELVFVVGFQANLMLKYVDKFIDDVQLHFRDRY 96
>UNIPROTKB|P06625 [details] [associations]
symbol:SRPR "Signal recognition particle receptor subunit
alpha" species:9615 "Canis lupus familiaris" [GO:0005789
"endoplasmic reticulum membrane" evidence=TAS] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0006614 "SRP-dependent cotranslational
protein targeting to membrane" evidence=IEA] [GO:0005785 "signal
recognition particle receptor complex" evidence=IEA] [GO:0005047
"signal recognition particle binding" evidence=IEA] [GO:0003924
"GTPase activity" evidence=IEA] Reactome:REACT_86357
InterPro:IPR000897 InterPro:IPR003593 InterPro:IPR007222
InterPro:IPR011012 InterPro:IPR013822 Pfam:PF00448 Pfam:PF02881
Pfam:PF04086 PROSITE:PS00300 SMART:SM00382 SMART:SM00962
SMART:SM00963 GO:GO:0005525 GO:GO:0005789 GO:GO:0003924
SUPFAM:SSF64356 eggNOG:COG0552 GO:GO:0006614 SUPFAM:SSF47364
GO:GO:0005785 Reactome:REACT_146484 GO:GO:0005047
HOGENOM:HOG000201671 HOVERGEN:HBG047566 OrthoDB:EOG4W0XCP
EMBL:X03184 PIR:A24570 ProteinModelPortal:P06625 SMR:P06625
STRING:P06625 PRIDE:P06625 InParanoid:P06625 Uniprot:P06625
Length = 638
Score = 492 (178.3 bits), Expect = 4.8e-64, Sum P(2) = 4.8e-64
Identities = 131/361 (36%), Positives = 191/361 (52%)
Query: 174 RGRKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDV--SKLQKLRNKGGKKTDTV 231
+G K E+ + + + +G+ G EN + ++ K ++ K G+ +
Sbjct: 170 KGAKKESSDGPLATGKAVPAEKSGLPAGPEN-GVELSKEELIRRKREEFIQKHGRGLEKS 228
Query: 232 VSKGSNPD-PKKKITKKNRVWDDSPPESK--LDFTDPAGGNGSNIEVEAAD----HGESM 284
SK + D PK+K K RVW +K LD++ P NG+ D G
Sbjct: 229 -SKSTKSDAPKEKGKKAPRVWALGGCANKEVLDYSAPTT-NGAPDAAPPEDINLIRGTGP 286
Query: 285 MDKXXXXXXXXXXXXXXXXGKHNKPDAKK--TGWFSSMFQSIAGKANLDKADLEPALKAL 342
+ +KP A K G M + + G +L + D+E L +
Sbjct: 287 GGQLQDLDCSSSDDEETAQNA-SKPSATKGTLGGMFGMLKGLVGSKSLSREDMESVLDKM 345
Query: 343 KDRLMTKNVAEEIAEKLCESVAASLEGKKLASFTRISSIVQAAMEEALVRILTPRRSIDI 402
+D L+ KNVA +IA +LCESVA LEGK + +F+ ++S V+ A++E+LV+IL P+R +D+
Sbjct: 346 RDHLIAKNVAADIAVQLCESVANKLEGKVMGTFSTVTSTVKQALQESLVQILQPQRRVDM 405
Query: 403 LRDVHAAKEQRKPYXXXXXXXXXXXKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQL 462
LRD+ A+ ++PY KSTNLAK+++WLL++ SV++AACDTFR+GAVE +
Sbjct: 406 LRDIMDAQRHQRPYVVTFCGVNGVGKSTNLAKISFWLLENGFSVLIAACDTFRAGAVEHV 465
Query: 463 RTHARRLQ-------------VPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRM 509
RTH RRL V +FEKGY KD A +A EAI A G DVVLVDTAGRM
Sbjct: 466 RTHTRRLSALHPPEKHAGPTMVQLFEKGYGKDAAGIAMEAIAFARNQGFDVVLVDTAGRM 525
Query: 510 Q 510
Q
Sbjct: 526 Q 526
Score = 179 (68.1 bits), Expect = 4.8e-64, Sum P(2) = 4.8e-64
Identities = 41/99 (41%), Positives = 62/99 (62%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
ML+ IF++GGL+LW + + ++ G P++ LIRS LL+ER G SF ++ A TLK
Sbjct: 1 MLDFFTIFSKGGLVLWCFQGVSDSCTG-PVNALIRSVLLQERGGNNSFTHE----ALTLK 55
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIY 99
+ N+ LVFV +Q+IL L YVD L+ + + F + Y
Sbjct: 56 YKLDNQFELVFVVGFQKILTLTYVDKLIDDVHRLFRDKY 94
>UNIPROTKB|F1PLH3 [details] [associations]
symbol:SRPR "Signal recognition particle receptor subunit
alpha" species:9615 "Canis lupus familiaris" [GO:0006614
"SRP-dependent cotranslational protein targeting to membrane"
evidence=IEA] [GO:0005785 "signal recognition particle receptor
complex" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0005047 "signal recognition particle binding" evidence=IEA]
[GO:0003924 "GTPase activity" evidence=IEA] InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR007222 InterPro:IPR011012
InterPro:IPR013822 Pfam:PF00448 Pfam:PF02881 Pfam:PF04086
PROSITE:PS00300 SMART:SM00382 SMART:SM00962 SMART:SM00963
GO:GO:0005525 GO:GO:0003924 SUPFAM:SSF64356 GO:GO:0006614
SUPFAM:SSF47364 KO:K13431 GO:GO:0005785 GO:GO:0005047 CTD:6734
GeneTree:ENSGT00550000074936 EMBL:AAEX03003376 EMBL:AAEX03003378
EMBL:AAEX03003377 EMBL:AAEX03003379 RefSeq:XP_546411.3
Ensembl:ENSCAFT00000016629 GeneID:489293 KEGG:cfa:489293
Uniprot:F1PLH3
Length = 638
Score = 500 (181.1 bits), Expect = 4.2e-61, Sum P(2) = 4.2e-61
Identities = 133/361 (36%), Positives = 192/361 (53%)
Query: 174 RGRKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDV--SKLQKLRNKGGKKTDTV 231
+G K E+ + + + +G+ G EN + ++ K ++ K G+ +
Sbjct: 170 KGAKKESSDGPLATGKAVPAEKSGLPAGPEN-GVELSKEELIRRKREEFIQKHGRGLEKS 228
Query: 232 VSKGSNPD-PKKKITKKNRVWDDSPPESK--LDFTDPAGGNGSNIEVEAAD----HGESM 284
SK + D PK+K K RVW +K LD++ P NG+ D G
Sbjct: 229 -SKSTKSDAPKEKGKKAPRVWALGGCANKEVLDYSAPTT-NGAPDAAPPEDINLIRGTGP 286
Query: 285 MDKXXXXXXXXXXXXXXXXGKHNKPDAKK--TGWFSSMFQSIAGKANLDKADLEPALKAL 342
+ +KP A K G M + + G +L + D+E L +
Sbjct: 287 GGQLQDLDCSSSDDEETAQNA-SKPSATKGTLGGMFGMLKGLVGSKSLSREDMESVLDKM 345
Query: 343 KDRLMTKNVAEEIAEKLCESVAASLEGKKLASFTRISSIVQAAMEEALVRILTPRRSIDI 402
+D L+ KNVA +IA +LCESVA LEGK + +F+ ++S V+ A++E+LV+IL P+R +D+
Sbjct: 346 RDHLIAKNVAADIAVQLCESVANKLEGKVMGTFSTVTSTVKQALQESLVQILQPQRRVDM 405
Query: 403 LRDVHAAKEQRKPYXXXXXXXXXXXKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQL 462
LRD+ A+ ++PY KSTNLAK+++WLL++ SV++AACDTFR+GAVEQL
Sbjct: 406 LRDIMDAQRHQRPYVVTFCGVNGVGKSTNLAKISFWLLENGFSVLIAACDTFRAGAVEQL 465
Query: 463 RTHARRLQ-------------VPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRM 509
RTH RRL V +FEKGY KD A +A EAI A G DVVLVDTAGRM
Sbjct: 466 RTHTRRLSALHPPEKHAGRTMVQLFEKGYGKDAAGIAMEAIAFARNQGFDVVLVDTAGRM 525
Query: 510 Q 510
Q
Sbjct: 526 Q 526
Score = 143 (55.4 bits), Expect = 4.2e-61, Sum P(2) = 4.2e-61
Identities = 36/99 (36%), Positives = 53/99 (53%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
ML+ IF++GGL+LW + G +D S +ER G SF ++ A TLK
Sbjct: 1 MLDFFTIFSKGGLVLWASRGASLGFLGG-LDVSETSSSFQERGGNNSFTHE----ALTLK 55
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIY 99
+ N+ LVFV +Q+IL L YVD L+ + + F + Y
Sbjct: 56 YKLDNQFELVFVVGFQKILTLTYVDKLIDDVHRLFRDKY 94
>WB|WBGene00009521 [details] [associations]
symbol:F38A1.8 species:6239 "Caenorhabditis elegans"
[GO:0005525 "GTP binding" evidence=IEA] [GO:0006614 "SRP-dependent
cotranslational protein targeting to membrane" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0003924
"GTPase activity" evidence=IEA] [GO:0005047 "signal recognition
particle binding" evidence=IEA] [GO:0005785 "signal recognition
particle receptor complex" evidence=IEA] [GO:0006184 "GTP catabolic
process" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0000003 "reproduction" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0018996
"molting cycle, collagen and cuticulin-based cuticle" evidence=IMP]
[GO:0048477 "oogenesis" evidence=IMP] InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR007222 InterPro:IPR011012
InterPro:IPR013822 Pfam:PF00448 Pfam:PF02881 Pfam:PF04086
PROSITE:PS00300 SMART:SM00382 SMART:SM00962 SMART:SM00963
GO:GO:0005525 GO:GO:0009792 GO:GO:0040007 GO:GO:0040010
GO:GO:0002119 GO:GO:0018996 GO:GO:0003924 GO:GO:0048477
SUPFAM:SSF64356 GO:GO:0006614 SUPFAM:SSF47364 KO:K13431
GO:GO:0005785 GO:GO:0005047 GeneTree:ENSGT00550000074936
OMA:KEGSDGP EMBL:FO080472 EMBL:FO081324 EMBL:FO081776
RefSeq:NP_741303.2 ProteinModelPortal:G4RYA5 SMR:G4RYA5
EnsemblMetazoa:F38A1.8 GeneID:185438 KEGG:cel:CELE_F38A1.8
CTD:185438 WormBase:F38A1.8 NextBio:928280 Uniprot:G4RYA5
Length = 625
Score = 502 (181.8 bits), Expect = 6.9e-61, Sum P(2) = 6.9e-61
Identities = 125/321 (38%), Positives = 179/321 (55%)
Query: 204 NTSSNIGAFDVSKLQKLRNKGGKKTDTVVSKG-SNPDPKKKITKKNRVW--DDSPPESK- 259
N++S G+ D L++ K + KG P K K+ RVW P + K
Sbjct: 194 NSASPPGSPDEEVLRRRDQMFKKMSGNTKKKGPEEPTSPKPKGKQARVWALSGKPADVKN 253
Query: 260 LDFTDPAGGNGSNIEVEAADHGESMMDKXXXXXXXXXXXXXXXXGKHNKPD---AKKTG- 315
LD +DP + + + E ESM ++ + D K++G
Sbjct: 254 LDRSDPKENDENAADEEKNRFVESMKEQIGTLKGDLKSLQESDDEDEDDNDQQVVKQSGG 313
Query: 316 WFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLASF 375
WFS M + + G+ L DL P ++ +++ L+ KNVA E AEK+C+SV + LEGK + +F
Sbjct: 314 WFS-MIKGLVGEKKLSAEDLNPLIEKMRENLILKNVASEPAEKICQSVVSKLEGKVVNNF 372
Query: 376 TRISSIVQAAMEEALVRILTPRRSIDILRDVHAAKEQRKPYXXXXXXXXXXXKSTNLAKV 435
+R++ V+ A+ E+LV++LTP+ +DILRDV AK +PY KSTNLAK+
Sbjct: 373 SRVAQEVKTAVRESLVQLLTPKHRVDILRDVIEAKRDGRPYVIVFCGVNGVGKSTNLAKI 432
Query: 436 AYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQ------VPIFEKGYEKDPAIVAKEA 489
+WL ++K V++AA DTFR+GAVEQLRTHAR L V + E+GY KDPA +A A
Sbjct: 433 TFWLTENKHRVLIAAGDTFRAGAVEQLRTHARYLNDLHKNSVLLHEQGYGKDPAGLAAAA 492
Query: 490 IQEATRNGSDVVLVDTAGRMQ 510
I++A DVVLVDTAGRMQ
Sbjct: 493 IKKAAEQDFDVVLVDTAGRMQ 513
Score = 139 (54.0 bits), Expect = 6.9e-61, Sum P(2) = 6.9e-61
Identities = 39/126 (30%), Positives = 62/126 (49%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
M+E IFT+GG+ LW +E + + LI+ L+EER + YT+K
Sbjct: 1 MIELFSIFTKGGVCLWNYQEGDYNFTEAINNELIKGTLMEERGNSGQKKVGN----YTMK 56
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSF----SE-------IYDPKRTDYSDF 109
+ NE ++F+ +YQ I++L Y + LL ++ SF SE + P Y +F
Sbjct: 57 FQLDNEYNVIFLVIYQTIVNLNYAEKLLNLVVDSFRGEFSENLREETALTTPPSNIYGNF 116
Query: 110 DEMFRQ 115
DE F +
Sbjct: 117 DETFHE 122
>UNIPROTKB|J9NTJ9 [details] [associations]
symbol:SRPR "Signal recognition particle receptor subunit
alpha" species:9615 "Canis lupus familiaris" [GO:0006614
"SRP-dependent cotranslational protein targeting to membrane"
evidence=IEA] [GO:0005785 "signal recognition particle receptor
complex" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0005047 "signal recognition particle binding" evidence=IEA]
[GO:0003924 "GTPase activity" evidence=IEA] InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR007222 InterPro:IPR011012
InterPro:IPR013822 Pfam:PF00448 Pfam:PF02881 Pfam:PF04086
PROSITE:PS00300 SMART:SM00382 SMART:SM00962 SMART:SM00963
GO:GO:0005525 GO:GO:0003924 SUPFAM:SSF64356 GO:GO:0006614
SUPFAM:SSF47364 GO:GO:0005785 GO:GO:0005047
GeneTree:ENSGT00550000074936 EMBL:AAEX03003376 EMBL:AAEX03003378
EMBL:AAEX03003377 EMBL:AAEX03003379 Ensembl:ENSCAFT00000045313
Uniprot:J9NTJ9
Length = 637
Score = 500 (181.1 bits), Expect = 4.8e-60, Sum P(2) = 4.8e-60
Identities = 133/361 (36%), Positives = 192/361 (53%)
Query: 174 RGRKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDV--SKLQKLRNKGGKKTDTV 231
+G K E+ + + + +G+ G EN + ++ K ++ K G+ +
Sbjct: 169 KGAKKESSDGPLATGKAVPAEKSGLPAGPEN-GVELSKEELIRRKREEFIQKHGRGLEKS 227
Query: 232 VSKGSNPD-PKKKITKKNRVWDDSPPESK--LDFTDPAGGNGSNIEVEAAD----HGESM 284
SK + D PK+K K RVW +K LD++ P NG+ D G
Sbjct: 228 -SKSTKSDAPKEKGKKAPRVWALGGCANKEVLDYSAPTT-NGAPDAAPPEDINLIRGTGP 285
Query: 285 MDKXXXXXXXXXXXXXXXXGKHNKPDAKK--TGWFSSMFQSIAGKANLDKADLEPALKAL 342
+ +KP A K G M + + G +L + D+E L +
Sbjct: 286 GGQLQDLDCSSSDDEETAQNA-SKPSATKGTLGGMFGMLKGLVGSKSLSREDMESVLDKM 344
Query: 343 KDRLMTKNVAEEIAEKLCESVAASLEGKKLASFTRISSIVQAAMEEALVRILTPRRSIDI 402
+D L+ KNVA +IA +LCESVA LEGK + +F+ ++S V+ A++E+LV+IL P+R +D+
Sbjct: 345 RDHLIAKNVAADIAVQLCESVANKLEGKVMGTFSTVTSTVKQALQESLVQILQPQRRVDM 404
Query: 403 LRDVHAAKEQRKPYXXXXXXXXXXXKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQL 462
LRD+ A+ ++PY KSTNLAK+++WLL++ SV++AACDTFR+GAVEQL
Sbjct: 405 LRDIMDAQRHQRPYVVTFCGVNGVGKSTNLAKISFWLLENGFSVLIAACDTFRAGAVEQL 464
Query: 463 RTHARRLQ-------------VPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRM 509
RTH RRL V +FEKGY KD A +A EAI A G DVVLVDTAGRM
Sbjct: 465 RTHTRRLSALHPPEKHAGRTMVQLFEKGYGKDAAGIAMEAIAFARNQGFDVVLVDTAGRM 524
Query: 510 Q 510
Q
Sbjct: 525 Q 525
Score = 133 (51.9 bits), Expect = 4.8e-60, Sum P(2) = 4.8e-60
Identities = 36/99 (36%), Positives = 54/99 (54%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
ML+ IF++GGL+LW + + G +D S +ER G SF ++ A TLK
Sbjct: 1 MLDFFTIFSKGGLVLWF-QGVSACCFGG-LDVSETSSSFQERGGNNSFTHE----ALTLK 54
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIY 99
+ N+ LVFV +Q+IL L YVD L+ + + F + Y
Sbjct: 55 YKLDNQFELVFVVGFQKILTLTYVDKLIDDVHRLFRDKY 93
>UNIPROTKB|J9P788 [details] [associations]
symbol:SRPR "Signal recognition particle receptor subunit
alpha" species:9615 "Canis lupus familiaris" [GO:0006614
"SRP-dependent cotranslational protein targeting to membrane"
evidence=IEA] [GO:0005785 "signal recognition particle receptor
complex" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0005047 "signal recognition particle binding" evidence=IEA]
[GO:0003924 "GTPase activity" evidence=IEA] InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR007222 InterPro:IPR011012
InterPro:IPR013822 Pfam:PF00448 Pfam:PF02881 Pfam:PF04086
PROSITE:PS00300 SMART:SM00382 SMART:SM00962 SMART:SM00963
GO:GO:0005525 GO:GO:0003924 SUPFAM:SSF64356 GO:GO:0006614
SUPFAM:SSF47364 GO:GO:0005785 GO:GO:0005047
GeneTree:ENSGT00550000074936 OMA:KEGSDGP EMBL:AAEX03003376
EMBL:AAEX03003378 EMBL:AAEX03003377 EMBL:AAEX03003379
Ensembl:ENSCAFT00000047935 Uniprot:J9P788
Length = 773
Score = 500 (181.1 bits), Expect = 9.0e-56, Sum P(2) = 9.0e-56
Identities = 133/361 (36%), Positives = 192/361 (53%)
Query: 174 RGRKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDV--SKLQKLRNKGGKKTDTV 231
+G K E+ + + + +G+ G EN + ++ K ++ K G+ +
Sbjct: 305 KGAKKESSDGPLATGKAVPAEKSGLPAGPEN-GVELSKEELIRRKREEFIQKHGRGLEKS 363
Query: 232 VSKGSNPD-PKKKITKKNRVWDDSPPESK--LDFTDPAGGNGSNIEVEAAD----HGESM 284
SK + D PK+K K RVW +K LD++ P NG+ D G
Sbjct: 364 -SKSTKSDAPKEKGKKAPRVWALGGCANKEVLDYSAPTT-NGAPDAAPPEDINLIRGTGP 421
Query: 285 MDKXXXXXXXXXXXXXXXXGKHNKPDAKK--TGWFSSMFQSIAGKANLDKADLEPALKAL 342
+ +KP A K G M + + G +L + D+E L +
Sbjct: 422 GGQLQDLDCSSSDDEETAQNA-SKPSATKGTLGGMFGMLKGLVGSKSLSREDMESVLDKM 480
Query: 343 KDRLMTKNVAEEIAEKLCESVAASLEGKKLASFTRISSIVQAAMEEALVRILTPRRSIDI 402
+D L+ KNVA +IA +LCESVA LEGK + +F+ ++S V+ A++E+LV+IL P+R +D+
Sbjct: 481 RDHLIAKNVAADIAVQLCESVANKLEGKVMGTFSTVTSTVKQALQESLVQILQPQRRVDM 540
Query: 403 LRDVHAAKEQRKPYXXXXXXXXXXXKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQL 462
LRD+ A+ ++PY KSTNLAK+++WLL++ SV++AACDTFR+GAVEQL
Sbjct: 541 LRDIMDAQRHQRPYVVTFCGVNGVGKSTNLAKISFWLLENGFSVLIAACDTFRAGAVEQL 600
Query: 463 RTHARRLQ-------------VPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRM 509
RTH RRL V +FEKGY KD A +A EAI A G DVVLVDTAGRM
Sbjct: 601 RTHTRRLSALHPPEKHAGRTMVQLFEKGYGKDAAGIAMEAIAFARNQGFDVVLVDTAGRM 660
Query: 510 Q 510
Q
Sbjct: 661 Q 661
Score = 101 (40.6 bits), Expect = 9.0e-56, Sum P(2) = 9.0e-56
Identities = 29/83 (34%), Positives = 42/83 (50%)
Query: 17 TCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLKWTFHNELGLVFVAVYQ 76
TC+ + T R+ EER G SF ++ A TLK+ N+ LVFV +Q
Sbjct: 151 TCRRRSGHTEVGARRTGPRARAAEERGGNNSFTHE----ALTLKYKLDNQFELVFVVGFQ 206
Query: 77 RILHLLYVDDLLAMMKQSFSEIY 99
+IL L YVD L+ + + F + Y
Sbjct: 207 KILTLTYVDKLIDDVHRLFRDKY 229
>ASPGD|ASPL0000006202 [details] [associations]
symbol:AN6627 species:162425 "Emericella nidulans"
[GO:0006184 "GTP catabolic process" evidence=IEA] [GO:0005785
"signal recognition particle receptor complex" evidence=IEA]
[GO:0003924 "GTPase activity" evidence=IEA] [GO:0006614
"SRP-dependent cotranslational protein targeting to membrane"
evidence=IEA] [GO:0045047 "protein targeting to ER" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0005047 "signal
recognition particle binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0005789
"endoplasmic reticulum membrane" evidence=IEA] InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR007222 InterPro:IPR011012
InterPro:IPR013822 Pfam:PF00448 Pfam:PF02881 Pfam:PF04086
PROSITE:PS00300 SMART:SM00382 SMART:SM00962 SMART:SM00963
GO:GO:0005525 GO:GO:0003924 EMBL:BN001301 SUPFAM:SSF64356
EMBL:AACD01000110 eggNOG:COG0552 GO:GO:0006614 SUPFAM:SSF47364
KO:K13431 GO:GO:0005785 GO:GO:0005047 HOGENOM:HOG000201671
OrthoDB:EOG42Z7ZQ RefSeq:XP_664231.1 ProteinModelPortal:Q5AYK3
STRING:Q5AYK3 EnsemblFungi:CADANIAT00007408 GeneID:2870372
KEGG:ani:AN6627.2 OMA:THETGRR Uniprot:Q5AYK3
Length = 636
Score = 421 (153.3 bits), Expect = 1.7e-54, Sum P(3) = 1.7e-54
Identities = 92/204 (45%), Positives = 126/204 (61%)
Query: 320 MFQSIAGKANLDKADLEPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLASFTRIS 379
+ ++I G L +ADLE LKA++D L+ KNVA E A +LCE V L GKK +F +
Sbjct: 326 LLRNIVGGKILTEADLEKPLKAMEDHLLKKNVAREAAVRLCEGVKQELVGKKTGNFQSVD 385
Query: 380 SIVQAAMEEALVRILTPRRSIDILRDVHAAKEQRK-----PYXXXXXXXXXXXKSTNLAK 434
+ +++AME +L +ILTP S+D+L ++ + K PY KSTNL K
Sbjct: 386 AALKSAMESSLRKILTPTSSLDLLHEIDTVTKANKQGTSRPYVISIVGVNGVGKSTNLGK 445
Query: 435 VAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQ----------VPIFEKGYEKDPAI 484
+ Y+LLQ+ +++AACDTFRSGAVEQLR HAR L+ V ++EKGY KD A
Sbjct: 446 ICYFLLQNNYRILIAACDTFRSGAVEQLRVHARNLKELSARENVGAVELYEKGYGKDAAN 505
Query: 485 VAKEAIQEATRNGSDVVLVDTAGR 508
VAK+A++ N DVVL+DTAGR
Sbjct: 506 VAKDAVEYGAANNFDVVLIDTAGR 529
Score = 131 (51.2 bits), Expect = 1.7e-54, Sum P(3) = 1.7e-54
Identities = 32/103 (31%), Positives = 54/103 (52%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGA----A 56
MLE I + G++LW+ K + +++L+ +EE++ L + +
Sbjct: 1 MLEAFEILSTSGVVLWS-KSYA-PVGAHVVNSLVNDVFIEEKAQLQNATNSVSPIFKKEK 58
Query: 57 YTLKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIY 99
YTLKW + L+FVAVYQ +LHL ++D LL + F ++Y
Sbjct: 59 YTLKWRKSKDFNLIFVAVYQSLLHLGWIDKLLDNISTIFVDLY 101
Score = 48 (22.0 bits), Expect = 1.7e-54, Sum P(3) = 1.7e-54
Identities = 16/43 (37%), Positives = 19/43 (44%)
Query: 229 DTVVSKGSNPDPKKKITKKNRVWD-----DSPPESKLDFTDPA 266
D V KG P KK+ RVWD D LD++ PA
Sbjct: 221 DEQVRKGKTPKSGKKL----RVWDADGLADEDDGRVLDYSAPA 259
>POMBASE|SPBC3B9.03 [details] [associations]
symbol:SPBC3B9.03 "signal recognition particle receptor
alpha subunit Srp101 (predicted)" species:4896 "Schizosaccharomyces
pombe" [GO:0003924 "GTPase activity" evidence=ISM] [GO:0005047
"signal recognition particle binding" evidence=ISO] [GO:0005525
"GTP binding" evidence=ISM] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005785 "signal recognition particle receptor complex"
evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0006614
"SRP-dependent cotranslational protein targeting to membrane"
evidence=IC] InterPro:IPR000897 InterPro:IPR003593
InterPro:IPR007222 InterPro:IPR011012 InterPro:IPR013822
Pfam:PF00448 Pfam:PF02881 Pfam:PF04086 PROSITE:PS00300
SMART:SM00382 SMART:SM00962 SMART:SM00963 PomBase:SPBC3B9.03
GO:GO:0005525 GO:GO:0005829 GO:GO:0005634 EMBL:CU329671
GO:GO:0003924 GenomeReviews:CU329671_GR SUPFAM:SSF64356
eggNOG:COG0552 GO:GO:0006614 SUPFAM:SSF47364 KO:K13431
GO:GO:0005785 GO:GO:0005047 HSSP:Q6MTB9 HOGENOM:HOG000201671
PIR:T40342 RefSeq:NP_596660.1 ProteinModelPortal:O43032
STRING:O43032 EnsemblFungi:SPBC3B9.03.1 GeneID:2540909
KEGG:spo:SPBC3B9.03 OMA:PVEANND OrthoDB:EOG42Z7ZQ NextBio:20802024
Uniprot:O43032
Length = 547
Score = 436 (158.5 bits), Expect = 1.8e-48, Sum P(2) = 1.8e-48
Identities = 108/319 (33%), Positives = 160/319 (50%)
Query: 200 NGKENTSSNIGAFDVSKLQKLRNKGGKKTDTVVSKGSNPDPKKKITKKNRVWDDSPPESK 259
N + S + A + + +K +N+ K SK +N PKK K+ R WDD E +
Sbjct: 126 NETDTKSLPVEANNDNSARK-KNEYEMKKKGAQSKQTNA-PKKG-KKQLRKWDDQITEEE 182
Query: 260 ---LDFTDPAGGNGSNIEVEAADHGESMMDKXXXXXXXXXXXXXXXXGKHNKPDAKKTGW 316
L+++ A ++ +K + K
Sbjct: 183 QAALNYSSQASSASQTVDNSQLSSIVGNNNKFQKTGSGDVIISDLEMDPNQTISNKSASS 242
Query: 317 FSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLASFT 376
S+F ++ G L + DL P LK +++ L KNVA IA +LCESV ASL KK+ SF
Sbjct: 243 AFSLFSNLIGGKYLKEEDLSPILKQMQEHLTKKNVANSIALELCESVKASLINKKVGSFD 302
Query: 377 RISSIVQAAMEEALVRILTPRRSIDILRDVHAA-KEQRKPYXXXXXXXXXXXKSTNLAKV 435
+ + V A + L +ILTP S+D+L + + K + +PY KST LAK+
Sbjct: 303 TVKNTVNKAFRDRLTQILTPSTSLDLLHSIRSVRKNENRPYTISLIGVNGVGKSTTLAKI 362
Query: 436 AYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQ------VPIFEKGYEKDPAIVAKEA 489
AYWLL + +++AACDTFRSGA+EQL H + LQ + +F +GY KD + V K A
Sbjct: 363 AYWLLSNNFRILVAACDTFRSGAIEQLGVHVKNLQSLKGSSIELFAQGYGKDSSFVVKNA 422
Query: 490 IQEATRNGSDVVLVDTAGR 508
++ A +N DV+L+DTAGR
Sbjct: 423 VEYAKQNSFDVILIDTAGR 441
Score = 87 (35.7 bits), Expect = 1.8e-48, Sum P(2) = 1.8e-48
Identities = 25/106 (23%), Positives = 48/106 (45%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLL-EERSGLASFNYDSAGAAYTL 59
M++ I +GG++LW K+ + + + L L E+R+ + +D YT+
Sbjct: 1 MIDLFAIVNKGGIVLW--KKTNSLVNLKCLQVLFHEAFLSEQRTVNNTVTFDR----YTM 54
Query: 60 KWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTD 105
++ + +VFV V+Q + + Y LL F ++ K D
Sbjct: 55 QYQEATQYSIVFVVVFQDLKCMAYSQSLLNSAHNIFLNLFKEKLED 100
>SGD|S000002700 [details] [associations]
symbol:SRP101 "Signal recognition particle (SRP) receptor
alpha subunit" species:4932 "Saccharomyces cerevisiae" [GO:0005525
"GTP binding" evidence=IEA;IPI] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0006614 "SRP-dependent
cotranslational protein targeting to membrane" evidence=IEA;IC;TAS]
[GO:0005047 "signal recognition particle binding" evidence=ISS;IMP]
[GO:0005785 "signal recognition particle receptor complex"
evidence=TAS] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IEA;IDA] [GO:0045047 "protein targeting to ER"
evidence=IMP] [GO:0006810 "transport" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR000897 InterPro:IPR003593 InterPro:IPR011012
InterPro:IPR013822 Pfam:PF00448 Pfam:PF02881 PROSITE:PS00300
SMART:SM00382 SMART:SM00962 SGD:S000002700 GO:GO:0005525
EMBL:BK006938 GO:GO:0017111 SUPFAM:SSF64356 EMBL:U51031
eggNOG:COG0552 GO:GO:0006614 SUPFAM:SSF47364 RefSeq:NP_010578.3
GeneID:851886 KEGG:sce:YDR292C KO:K13431 RefSeq:NP_010582.3
GeneID:851890 KEGG:sce:YDR296W GO:GO:0005785 TCDB:3.A.5.8.1
GO:GO:0005047 PDB:1NRJ PDBsum:1NRJ HOGENOM:HOG000201671
GeneTree:ENSGT00550000074936 OrthoDB:EOG42Z7ZQ EMBL:M77274
PIR:S70121 ProteinModelPortal:P32916 SMR:P32916 DIP:DIP-1672N
IntAct:P32916 MINT:MINT-364995 STRING:P32916 PaxDb:P32916
PeptideAtlas:P32916 EnsemblFungi:YDR292C CYGD:YDR292c OMA:HVENLAQ
EvolutionaryTrace:P32916 NextBio:969862 Genevestigator:P32916
GermOnline:YDR292C InterPro:IPR015284 Pfam:PF09201 Uniprot:P32916
Length = 621
Score = 337 (123.7 bits), Expect = 5.4e-30, Sum P(2) = 5.4e-30
Identities = 93/305 (30%), Positives = 157/305 (51%)
Query: 218 QKLRNKGGKKTDTVVSKGSNPDPKKKITKKNRVWDDSPPE--SKLDFTDPAGGNGSNIEV 275
+KLR+ GKK T N +K + + D+ E +KLDF+ N S + +
Sbjct: 189 KKLRDTKGKKQST-----GNVGSGRKWGRDGGMLDEMNHEDAAKLDFSSSNSHNSSQVAL 243
Query: 276 EAADHGESMMDKXXXXXXXXXXXXXXXXGKHNK----PDAKKTGWFSSMF----QSIAGK 327
++ + +S D+ ++ +AK +G+ S+ F + + G
Sbjct: 244 DSTINKDSFGDRTEGGDFLIKEIDDLLSSHKDEITSGNEAKNSGYVSTAFGFLQKHVLGN 303
Query: 328 ANLDKADLEPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLASFTRISSIVQAAME 387
++++DL+ L+ L +L+TKNVA E A+ L + V+ L G K A++T + + + ++
Sbjct: 304 KTINESDLKSVLEKLTQQLITKNVAPEAADYLTQQVSHDLVGSKTANWTSVENTARESLT 363
Query: 388 EALVRILTPRRSIDILRDVHAAK----EQRK--PYXXXXXXXXXXXKSTNLAKVAYWLLQ 441
+AL +ILTP S+D+LR++ + + E+ K PY KSTNL+K+A+WLLQ
Sbjct: 364 KALTQILTPGVSVDLLREIQSKRSKKDEEGKCDPYVFSIVGVNGVGKSTNLSKLAFWLLQ 423
Query: 442 HKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFE---KGYEKDPAIVAKEAIQ--EATRN 496
+ V++ ACDTFRSGAVEQLR H L + + +G + + ++ EA
Sbjct: 424 NNFKVLIVACDTFRSGAVEQLRVHVENLAQLMDDSHVRGSKNKRGKTGNDYVELFEAGYG 483
Query: 497 GSDVV 501
GSD+V
Sbjct: 484 GSDLV 488
Score = 48 (22.0 bits), Expect = 5.4e-30, Sum P(2) = 5.4e-30
Identities = 14/54 (25%), Positives = 25/54 (46%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCL---LEERSGLASFNYD 51
M +QL +FT G +L+ LG I++ I + + + +A+ N D
Sbjct: 1 MFDQLAVFTPQGQVLYQYNCLGKKFSEIQINSFISQLITSPVTRKESVANANTD 54
>CGD|CAL0003010 [details] [associations]
symbol:orf19.3952 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005789 "endoplasmic reticulum membrane" evidence=IEA]
[GO:0045047 "protein targeting to ER" evidence=IEA] [GO:0005525
"GTP binding" evidence=IEA] [GO:0005047 "signal recognition
particle binding" evidence=IEA] InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR007222 InterPro:IPR013822
Pfam:PF00448 Pfam:PF02881 Pfam:PF04086 PROSITE:PS00300
SMART:SM00382 SMART:SM00962 CGD:CAL0003010 GO:GO:0005525
GO:GO:0003924 EMBL:AACQ01000012 eggNOG:COG0552 GO:GO:0006614
SUPFAM:SSF47364 KO:K13431 GO:GO:0005785 GO:GO:0005047
RefSeq:XP_721861.1 ProteinModelPortal:Q5AK68 STRING:Q5AK68
GeneID:3636513 KEGG:cal:CaO19.3952 Uniprot:Q5AK68
Length = 535
Score = 323 (118.8 bits), Expect = 5.1e-27, P = 5.1e-27
Identities = 76/210 (36%), Positives = 115/210 (54%)
Query: 314 TGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLA 373
+G+FS + + G N+D+ K +++L+TKN+ IA + + + L K
Sbjct: 228 SGFFSKISSYLGGTINVDEVS-----KKFREQLITKNITPGIATTIIDKIKTKLSANKKV 282
Query: 374 SFTRISSIVQAAMEEALVRILTPRRSIDILRDVHAAKE-QRKPYXXXXXXXXXXXKSTNL 432
+ ++ + A+ + L +ILTP S D+L D+ E +PY KSTNL
Sbjct: 283 TM----AVYKQALTDELTKILTPNVSTDLLHDIKRNAELNTRPYVISVVGVNGVGKSTNL 338
Query: 433 AKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRL------------QVPIFEKGYEK 480
AK+A+W LQ+ ++V++ ACDTFRSGAVEQL+ H L ++ IFEKGY
Sbjct: 339 AKLAFWFLQNNLNVLICACDTFRSGAVEQLKVHVNNLNRLNEASTNTKSRIDIFEKGYGS 398
Query: 481 DPAIV--AKEAIQEATRNGSDVVLVDTAGR 508
+V AK+A+Q A N D+VL+DTAGR
Sbjct: 399 GDHVVQTAKQAVQYAEENKFDIVLIDTAGR 428
>TIGR_CMR|VC_0147 [details] [associations]
symbol:VC_0147 "signal recognition particle-docking protein
FtsY" species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0003924
"GTPase activity" evidence=ISS] [GO:0005047 "signal recognition
particle binding" evidence=ISS] [GO:0009306 "protein secretion"
evidence=ISS] HAMAP:MF_00920 InterPro:IPR000897 InterPro:IPR003593
InterPro:IPR004390 InterPro:IPR013822 Pfam:PF00448 Pfam:PF02881
PROSITE:PS00300 SMART:SM00382 SMART:SM00962 SMART:SM00963
GO:GO:0005525 GO:GO:0005737 GO:GO:0051301 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0003924 GO:GO:0031226 KO:K03110
ProtClustDB:PRK10416 GO:GO:0006614 SUPFAM:SSF47364
TIGRFAMs:TIGR00064 OMA:VEAVAIQ HSSP:P10121 PIR:B82360
RefSeq:NP_229805.1 ProteinModelPortal:Q9KVJ6 SMR:Q9KVJ6
DNASU:2614855 GeneID:2614855 KEGG:vch:VC0147 PATRIC:20079332
Uniprot:Q9KVJ6
Length = 391
Score = 201 (75.8 bits), Expect = 2.7e-13, P = 2.7e-13
Identities = 63/197 (31%), Positives = 93/197 (47%)
Query: 319 SMFQSIAGKANLDKADLEPALKAL-KDRLMTKNVAEEIAEKLC-ESVAASLEGKKLASFT 376
S F + + KA++ L K + + ++ EE+ E+L V K +A+ T
Sbjct: 87 SFFARLKRSLSRTKANIGAGFFGLFKGKKIDDDLFEELEEQLLIADVGMDTTSKIIANLT 146
Query: 377 RISSIVQAAMEEALVRILTPRRSIDILRDVH---AAKEQRKPYXXXXXXXXXXXKSTNLA 433
+S Q EAL +L + +IL V ++KPY K+T +
Sbjct: 147 ARASRQQLRDGEALYGLLKEEMA-EILSQVEQPLVIDTEKKPYVILMVGVNGVGKTTTIG 205
Query: 434 KVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEA 493
K+A VM+AA DTFR+ AVEQL+ R QVP+ + D A V +AI+ A
Sbjct: 206 KLAKQFQAQGKKVMLAAGDTFRAAAVEQLQVWGERNQVPVIAQHTGADSASVIYDAIEAA 265
Query: 494 TRNGSDVVLVDTAGRMQ 510
G DVV+ DTAGR+Q
Sbjct: 266 KARGIDVVIADTAGRLQ 282
>TIGR_CMR|GSU_0642 [details] [associations]
symbol:GSU_0642 "signal recognition particle protein"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0005048 "signal sequence binding"
evidence=ISS] [GO:0009306 "protein secretion" evidence=ISS]
[GO:0048501 "signal recognition particle, plasma membrane
targeting" evidence=ISS] HAMAP:MF_00306 InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR004125 InterPro:IPR004780
InterPro:IPR013822 InterPro:IPR022941 Pfam:PF00448 Pfam:PF02881
Pfam:PF02978 PROSITE:PS00300 SMART:SM00382 SMART:SM00962
SMART:SM00963 GO:GO:0005525 GO:GO:0003924 GO:GO:0006184
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0008312 GO:GO:0006614
SUPFAM:SSF47364 GO:GO:0005786 KO:K03106 Gene3D:1.10.260.30
SUPFAM:SSF47446 HOGENOM:HOG000036164 PANTHER:PTHR11564:SF7
TIGRFAMs:TIGR00959 OMA:GQQVVKI ProtClustDB:PRK10867
RefSeq:NP_951699.1 ProteinModelPortal:Q74FG7 GeneID:2685362
KEGG:gsu:GSU0642 PATRIC:22024031 BioCyc:GSUL243231:GH27-644-MONOMER
Uniprot:Q74FG7
Length = 452
Score = 200 (75.5 bits), Expect = 5.3e-13, P = 5.3e-13
Identities = 58/201 (28%), Positives = 104/201 (51%)
Query: 320 MFQSIAGKANLDKADLEPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKK-LASFTRI 378
+F+ + G+ + + +++ AL+ ++ L+ +V ++ + E V G + L S T
Sbjct: 12 LFKKLRGQGVMSEENIKEALREVRLVLLEADVNFKVVKDFVERVRVRAVGTQVLQSLTPG 71
Query: 379 SSIVQAAMEEALVRILT--PRRSIDILRDVHAAKEQRKPYXXXXXXXXXXXKSTNLAKVA 436
+++ EE LV ++ S+D+ AAK P K+T+ K+A
Sbjct: 72 QQVIKIVQEE-LVALMGGGEDNSLDL-----AAKP---PVPIMMVGLQGAGKTTSCGKLA 122
Query: 437 YWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRN 496
L + ++ D +R A+EQL+T R+L V +F+ ++DP + +EA++ AT N
Sbjct: 123 RLLKGQRRRPLLVPADVYRPAAIEQLKTLGRQLSVEVFDSRADQDPVDICREALRYATLN 182
Query: 497 GSDVVLVDTAGRMQVIIEYYL 517
G DVV++DTAGR Q I EY +
Sbjct: 183 GFDVVILDTAGRHQ-IDEYLM 202
>TIGR_CMR|APH_1227 [details] [associations]
symbol:APH_1227 "signal recognition particle-docking
protein FtsY" species:212042 "Anaplasma phagocytophilum HZ"
[GO:0003924 "GTPase activity" evidence=ISS] [GO:0005047 "signal
recognition particle binding" evidence=ISS] [GO:0009306 "protein
secretion" evidence=ISS] InterPro:IPR000897 InterPro:IPR003593
InterPro:IPR004390 InterPro:IPR013822 Pfam:PF00448 Pfam:PF02881
SMART:SM00382 SMART:SM00962 SMART:SM00963 GO:GO:0005525
GO:GO:0006184 EMBL:CP000235 GenomeReviews:CP000235_GR GO:GO:0017111
eggNOG:COG0552 HOGENOM:HOG000036278 KO:K03110 ProtClustDB:PRK10416
GO:GO:0006614 SUPFAM:SSF47364 TIGRFAMs:TIGR00064 OMA:ADMGVET
RefSeq:YP_505757.1 ProteinModelPortal:Q2GIP4 STRING:Q2GIP4
GeneID:3931129 KEGG:aph:APH_1227 PATRIC:20951240
BioCyc:APHA212042:GHPM-1232-MONOMER Uniprot:Q2GIP4
Length = 305
Score = 194 (73.4 bits), Expect = 5.5e-13, P = 5.5e-13
Identities = 55/181 (30%), Positives = 94/181 (51%)
Query: 332 KADLEPA-LKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLASFT-RISSIVQAAMEEA 389
KAD++ + LKAL+D L++ ++ ++A+ + ++ FT ++ V+ +
Sbjct: 33 KADVDQSTLKALRDLLISTDMGPDVADFFTQKIST-------LKFTDSVAEEVRLKLASE 85
Query: 390 LVRILTPRRS-IDILRDVHAAKEQRKPYXXXXXXXXXXXKSTNLAKVAYWLLQHKVSVMM 448
+ L PR + I I H P+ K+T +AK+A+ ++ +SV++
Sbjct: 86 IENFLQPRSAPITI---THT------PHIILLCGVNGSGKTTTVAKLAHKFMKKNMSVII 136
Query: 449 AACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGR 508
ACDTFR+ AVEQL A R+ PI D A VA + ++ A + DVV++DTAGR
Sbjct: 137 GACDTFRAAAVEQLNVWAERISCPIVTGTIGADAASVAYKTVERAVKEPFDVVIIDTAGR 196
Query: 509 M 509
+
Sbjct: 197 L 197
>TIGR_CMR|CBU_0450 [details] [associations]
symbol:CBU_0450 "signal recognition particle protein"
species:227377 "Coxiella burnetii RSA 493" [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0005048 "signal sequence binding"
evidence=ISS] [GO:0009306 "protein secretion" evidence=ISS]
[GO:0048501 "signal recognition particle, plasma membrane
targeting" evidence=ISS] HAMAP:MF_00306 InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR004125 InterPro:IPR004780
InterPro:IPR013822 InterPro:IPR022941 Pfam:PF00448 Pfam:PF02881
Pfam:PF02978 PROSITE:PS00300 SMART:SM00382 SMART:SM00962
SMART:SM00963 GO:GO:0005525 GO:GO:0003924 GO:GO:0006184
EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0008312 GO:GO:0006614
SUPFAM:SSF47364 GO:GO:0005786 KO:K03106 Gene3D:1.10.260.30
SUPFAM:SSF47446 HOGENOM:HOG000036164 PANTHER:PTHR11564:SF7
TIGRFAMs:TIGR00959 OMA:GQQVVKI ProtClustDB:PRK10867 HSSP:O07347
RefSeq:NP_819486.1 ProteinModelPortal:Q83E79 PRIDE:Q83E79
GeneID:1208334 KEGG:cbu:CBU_0450 PATRIC:17929591
BioCyc:CBUR227377:GJ7S-448-MONOMER Uniprot:Q83E79
Length = 461
Score = 190 (71.9 bits), Expect = 7.3e-12, P = 7.3e-12
Identities = 49/199 (24%), Positives = 97/199 (48%)
Query: 314 TGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLA 373
T ++ + G L + +++ L ++ L+ +VA + + E V G+++
Sbjct: 6 TNRLTTSINKLRGLGRLTEENIQSTLHDIRSALIEADVALPVVKDFIEHVREKALGQEVI 65
Query: 374 SFTRISSIVQAAMEEALVRILTPRRSIDILRDVHAAKEQRKPYXXXXXXXXXXXKSTNLA 433
R + +++ L +L D L +++ + P K+T +A
Sbjct: 66 GNVRPGEALVKVVQDELTHLLG-----DELVEINL--NAQPPIVIVMAGLQGSGKTTTVA 118
Query: 434 KVAYWLLQ-HKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQE 492
K+A WLL+ K SVM+A+ D +R A++QL T A ++ F ++ P +AK A+++
Sbjct: 119 KLARWLLEIQKKSVMVASADVYRPAAIQQLETLASQINAIFFPTQADQKPVEIAKAALKQ 178
Query: 493 ATRNGSDVVLVDTAGRMQV 511
A + DV+++DTAGR+ +
Sbjct: 179 AEKQFMDVLILDTAGRLHI 197
>TIGR_CMR|CJE_1340 [details] [associations]
symbol:CJE_1340 "signal recognition particle-docking
protein FtsY" species:195099 "Campylobacter jejuni RM1221"
[GO:0003924 "GTPase activity" evidence=ISS] [GO:0005047 "signal
recognition particle binding" evidence=ISS] [GO:0009306 "protein
secretion" evidence=ISS] HAMAP:MF_00920 InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR004390 InterPro:IPR013822
Pfam:PF00448 Pfam:PF02881 PROSITE:PS00300 SMART:SM00382
SMART:SM00962 GO:GO:0005525 GO:GO:0005737 GO:GO:0003924
EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0031226
eggNOG:COG0552 KO:K03110 ProtClustDB:PRK10416 GO:GO:0006614
SUPFAM:SSF47364 TIGRFAMs:TIGR00064 HOGENOM:HOG000036277
RefSeq:YP_179327.1 ProteinModelPortal:Q5HTQ8 STRING:Q5HTQ8
GeneID:3231847 KEGG:cjr:CJE1340 PATRIC:20044480 OMA:DLVTPKQ
BioCyc:CJEJ195099:GJC0-1366-MONOMER Uniprot:Q5HTQ8
Length = 288
Score = 183 (69.5 bits), Expect = 8.0e-12, P = 8.0e-12
Identities = 52/170 (30%), Positives = 85/170 (50%)
Query: 355 IAEKLCESVAASLEGKKLASFTRISSIVQAAME----EALVRILTPRRSI---DILRDV- 406
+A+ L V E KK+ +++A + E ++ L P+ + D+ R +
Sbjct: 9 LAKTLENIVGVKGENKKITKDLLEEILLEADVSYEIVEEIIYYLPPQNEVKKEDLKRVMG 68
Query: 407 ----HAAKE--QRKPYXXXXXXXXXXXKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVE 460
+ KE Q KP+ K+T++AK+AY V++ ACDTFR+GA+E
Sbjct: 69 SYFLYEKKETNQEKPFVELILGVNGAGKTTSIAKLAYLYKNQNQKVILGACDTFRAGAIE 128
Query: 461 QLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQ 510
QL+ A+++ V I DP+ VA + I +A D V++DTAGR+Q
Sbjct: 129 QLKLWAQKVDVDIVLTAQGHDPSAVAFDTISKAKAKDFDRVIIDTAGRLQ 178
>TIGR_CMR|NSE_0545 [details] [associations]
symbol:NSE_0545 "signal recognition particle-docking
protein FtsY" species:222891 "Neorickettsia sennetsu str. Miyayama"
[GO:0003924 "GTPase activity" evidence=ISS] [GO:0009306 "protein
secretion" evidence=ISS] InterPro:IPR000897 InterPro:IPR003593
InterPro:IPR004390 InterPro:IPR013822 Pfam:PF00448 Pfam:PF02881
SMART:SM00382 SMART:SM00962 SMART:SM00963 GO:GO:0005525
GO:GO:0006184 GO:GO:0017111 EMBL:CP000237 GenomeReviews:CP000237_GR
eggNOG:COG0552 HOGENOM:HOG000036278 KO:K03110 ProtClustDB:PRK10416
GO:GO:0006614 SUPFAM:SSF47364 TIGRFAMs:TIGR00064 RefSeq:YP_506428.1
ProteinModelPortal:Q2GDL8 STRING:Q2GDL8 GeneID:3931766
KEGG:nse:NSE_0545 PATRIC:22681139 OMA:RIISQNQ
BioCyc:NSEN222891:GHFU-564-MONOMER Uniprot:Q2GDL8
Length = 309
Score = 182 (69.1 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 53/198 (26%), Positives = 97/198 (48%)
Query: 312 KKTGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKK 371
K + SS +I K + ++ +E L++ L++ ++ + E++ ++V ++ K
Sbjct: 15 KSRDYLSSGIDNIFAKEKISESTIEQ----LEELLISADIGPTVTERIIKTVK-KIKVKD 69
Query: 372 LASFTRISSIVQAAMEEALVRILTPRRSIDILRDVHAAKEQRKPYXXXXXXXXXXXKSTN 431
S ++ SI + M+ ++L P I Q P K+T
Sbjct: 70 GESLEQVKSITREEMK----KVLDPTSKKLIF-------PQTGPQVIVFCGVNGNGKTTT 118
Query: 432 LAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQ 491
+ K+AY +Q +VM+AACD FR+ A+EQLR A R F K+ + A +A++
Sbjct: 119 IGKLAYKFIQENKTVMIAACDLFRAAAIEQLRFWAERASATFFSSETSKNASGTAYKALE 178
Query: 492 EATRNGSDVVLVDTAGRM 509
+A + DV++VDT+GR+
Sbjct: 179 KALEDKVDVLIVDTSGRL 196
>TIGR_CMR|BA_3985 [details] [associations]
symbol:BA_3985 "signal recognition particle-docking protein
FtsY" species:198094 "Bacillus anthracis str. Ames" [GO:0003924
"GTPase activity" evidence=ISS] [GO:0005047 "signal recognition
particle binding" evidence=ISS] [GO:0009306 "protein secretion"
evidence=ISS] HAMAP:MF_00920 InterPro:IPR000897 InterPro:IPR003593
InterPro:IPR004390 InterPro:IPR013822 Pfam:PF00448 Pfam:PF02881
PROSITE:PS00300 SMART:SM00382 SMART:SM00962 SMART:SM00963
GO:GO:0005525 GO:GO:0005737 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0003924 GO:GO:0031226 KO:K03110
ProtClustDB:PRK10416 GO:GO:0006614 SUPFAM:SSF47364
TIGRFAMs:TIGR00064 HSSP:P83749 HOGENOM:HOG000036277
RefSeq:NP_846227.1 RefSeq:YP_020624.1 RefSeq:YP_029949.1
ProteinModelPortal:Q81WJ0 SMR:Q81WJ0 DNASU:1086789
EnsemblBacteria:EBBACT00000008913 EnsemblBacteria:EBBACT00000016260
EnsemblBacteria:EBBACT00000019469 GeneID:1086789 GeneID:2817443
GeneID:2848220 KEGG:ban:BA_3985 KEGG:bar:GBAA_3985 KEGG:bat:BAS3698
OMA:LVYRYRK BioCyc:BANT260799:GJAJ-3756-MONOMER
BioCyc:BANT261594:GJ7F-3873-MONOMER Uniprot:Q81WJ0
Length = 329
Score = 175 (66.7 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 45/129 (34%), Positives = 67/129 (51%)
Query: 382 VQAAMEEALVRILTPRRSIDILRDVHAAKEQRKPYXXXXXXXXXXXKSTNLAKVAYWLLQ 441
VQA + E L+ I + D +V+ K+ K+T + K+A+
Sbjct: 91 VQAVISEKLIEIY--KGDSDFTNEVNMQKDGLT--VVLFVGVNGVGKTTTIGKMAHKFKS 146
Query: 442 HKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVV 501
SV++AA DTFR+GA+EQL R+ V + ++G DPA V +A+Q A DV+
Sbjct: 147 EGKSVLLAAGDTFRAGAIEQLEVWGDRVGVEVIKQGSGSDPAAVMYDAVQAAKARNVDVL 206
Query: 502 LVDTAGRMQ 510
L DTAGR+Q
Sbjct: 207 LCDTAGRLQ 215
Score = 46 (21.3 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 10/21 (47%), Positives = 14/21 (66%)
Query: 214 VSKLQKLRNKGGKKTDTVVSK 234
+S +KL+ K K+TDTV K
Sbjct: 1 MSFFKKLKEKISKQTDTVTEK 21
>TIGR_CMR|APH_0349 [details] [associations]
symbol:APH_0349 "signal recognition particle protein"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0005048 "signal sequence binding"
evidence=ISS] [GO:0006617 "SRP-dependent cotranslational protein
targeting to membrane, signal sequence recognition" evidence=ISS]
[GO:0009306 "protein secretion" evidence=ISS] [GO:0048501 "signal
recognition particle, plasma membrane targeting" evidence=ISS]
InterPro:IPR000897 InterPro:IPR003593 InterPro:IPR004125
InterPro:IPR004780 InterPro:IPR013822 Pfam:PF00448 Pfam:PF02881
Pfam:PF02978 PROSITE:PS00300 SMART:SM00382 SMART:SM00962
SMART:SM00963 GO:GO:0005525 GO:GO:0003924 GO:GO:0006184
EMBL:CP000235 GenomeReviews:CP000235_GR GO:GO:0008312 GO:GO:0006614
SUPFAM:SSF47364 eggNOG:COG0541 KO:K03106 Gene3D:1.10.260.30
SUPFAM:SSF47446 HOGENOM:HOG000036164 PANTHER:PTHR11564:SF7
TIGRFAMs:TIGR00959 OMA:GQQVVKI ProtClustDB:PRK10867 GO:GO:0048500
RefSeq:YP_504956.1 ProteinModelPortal:Q2GKZ5 STRING:Q2GKZ5
GeneID:3930944 KEGG:aph:APH_0349 PATRIC:20949288
BioCyc:APHA212042:GHPM-378-MONOMER Uniprot:Q2GKZ5
Length = 449
Score = 184 (69.8 bits), Expect = 3.2e-11, P = 3.2e-11
Identities = 56/202 (27%), Positives = 97/202 (48%)
Query: 314 TGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLA 373
T FSS Q ++GK + D + ++ + L+ +V + ++ E+V + + G +
Sbjct: 6 TKGFSSALQRLSGKREISSKDFDLVIEDITQALLDADVNLGVVDEFIENVKSKIVGGDVV 65
Query: 374 SFTRISSIVQAAMEEALVRILTPRRS-IDILRDVHAAKEQRKPYXXXXXXXXXXXKSTNL 432
+V +EE L+ +L +S +D+ + P K+TN
Sbjct: 66 KGVLPEQMVIKRIEECLIEVLGNEKSALDLKGKI--------PAVIMMVGLQGVGKTTNT 117
Query: 433 AKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQV---PIFEKGYEKDPAIVAKEA 489
KVA L + + ++A+ D +R A EQL+ A + + PI E E+ P +AK A
Sbjct: 118 VKVALRLKKDSKNPLVASLDVYRPAAREQLKVLADGVGIDSLPIVE---EQKPLDIAKRA 174
Query: 490 IQEATRNGSDVVLVDTAGRMQV 511
++EA G DVVL+DTAGR+ +
Sbjct: 175 MREARLKGHDVVLLDTAGRLHI 196
>UNIPROTKB|P10121 [details] [associations]
symbol:ftsY "SRP receptor" species:83333 "Escherichia coli
K-12" [GO:0006184 "GTP catabolic process" evidence=IEA;IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0031226 "intrinsic to
plasma membrane" evidence=IDA] [GO:0003924 "GTPase activity"
evidence=IDA] [GO:0006614 "SRP-dependent cotranslational protein
targeting to membrane" evidence=IEA;IDA] [GO:0005525 "GTP binding"
evidence=IEA;IDA] HAMAP:MF_00920 InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR004390 InterPro:IPR013822
Pfam:PF00448 Pfam:PF02881 PROSITE:PS00300 SMART:SM00382
SMART:SM00962 SMART:SM00963 GO:GO:0005525 GO:GO:0005829 EMBL:U00039
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0003924 GO:GO:0031226 EMBL:X04398
PIR:S03130 RefSeq:NP_417921.1 RefSeq:YP_491970.1 PDB:1FTS PDB:2QY9
PDB:2XXA PDB:2YHS PDBsum:1FTS PDBsum:2QY9 PDBsum:2XXA PDBsum:2YHS
ProteinModelPortal:P10121 SMR:P10121 DIP:DIP-9709N IntAct:P10121
MINT:MINT-1247716 TCDB:3.A.5.1.1 PRIDE:P10121
EnsemblBacteria:EBESCT00000004496 EnsemblBacteria:EBESCT00000016891
GeneID:12933505 GeneID:947978 KEGG:ecj:Y75_p3714 KEGG:eco:b3464
PATRIC:32122372 EchoBASE:EB0342 EcoGene:EG10346 eggNOG:COG0552
HOGENOM:HOG000036278 KO:K03110 OMA:AETNAEY ProtClustDB:PRK10416
BioCyc:EcoCyc:EG10346-MONOMER BioCyc:ECOL316407:JW3429-MONOMER
EvolutionaryTrace:P10121 Genevestigator:P10121 GO:GO:0006614
SUPFAM:SSF47364 TIGRFAMs:TIGR00064 Uniprot:P10121
Length = 497
Score = 184 (69.8 bits), Expect = 4.0e-11, P = 4.0e-11
Identities = 63/210 (30%), Positives = 98/210 (46%)
Query: 305 KHNKPDAKKTGWFSSMFQSIAG-KANLDKADLEPALKALKDRLMTKNVAEEIAEKLC-ES 362
+ KP K G+F+ + +S+ K NL + + + + ++ EE+ E+L
Sbjct: 186 EQEKPT--KEGFFARLKRSLLKTKENLGSG----FISLFRGKKIDDDLFEELEEQLLIAD 239
Query: 363 VAASLEGKKLASFTRISSIVQAAMEEALVRILTPRRSIDILRDVHAAK--EQRKPYXXXX 420
V K + + T +S Q EAL +L +IL V E + P+
Sbjct: 240 VGVETTRKIITNLTEGASRKQLRDAEALYGLLKEEMG-EILAKVDEPLNVEGKAPFVILM 298
Query: 421 XXXXXXXKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEK 480
K+T + K+A Q SVM+AA DTFR+ AVEQL+ +R +P+ +
Sbjct: 299 VGVNGVGKTTTIGKLARQFEQQGKSVMLAAGDTFRAAAVEQLQVWGQRNNIPVIAQHTGA 358
Query: 481 DPAIVAKEAIQEATRNGSDVVLVDTAGRMQ 510
D A V +AIQ A DV++ DTAGR+Q
Sbjct: 359 DSASVIFDAIQAAKARNIDVLIADTAGRLQ 388
>TAIR|locus:2150620 [details] [associations]
symbol:CPSRP54 "chloroplast signal recognition particle
54 kDa subunit" species:3702 "Arabidopsis thaliana" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003729 "mRNA binding"
evidence=ISS] [GO:0005048 "signal sequence binding" evidence=IDA]
[GO:0005525 "GTP binding" evidence=IEA;ISS] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0005786 "signal recognition particle, endoplasmic
reticulum targeting" evidence=ISS] [GO:0006614 "SRP-dependent
cotranslational protein targeting to membrane" evidence=IEA]
[GO:0006617 "SRP-dependent cotranslational protein targeting to
membrane, signal sequence recognition" evidence=ISS] [GO:0008312
"7S RNA binding" evidence=IEA;ISS] [GO:0009570 "chloroplast stroma"
evidence=IDA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0045038 "protein import into chloroplast
thylakoid membrane" evidence=IDA] [GO:0048500 "signal recognition
particle" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0080085 "signal recognition particle, chloroplast targeting"
evidence=IMP] [GO:0009507 "chloroplast" evidence=IDA] [GO:0010267
"production of ta-siRNAs involved in RNA interference"
evidence=RCA] [GO:0019288 "isopentenyl diphosphate biosynthetic
process, mevalonate-independent pathway" evidence=RCA] [GO:0035196
"production of miRNAs involved in gene silencing by miRNA"
evidence=RCA] [GO:0051607 "defense response to virus" evidence=RCA]
InterPro:IPR000897 InterPro:IPR003593 InterPro:IPR004125
InterPro:IPR004780 InterPro:IPR013822 InterPro:IPR022941
Pfam:PF00448 Pfam:PF02881 Pfam:PF02978 PROSITE:PS00300
SMART:SM00382 SMART:SM00962 SMART:SM00963 GO:GO:0005525
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009570 GO:GO:0003924
GO:GO:0006184 EMBL:AL162873 GO:GO:0008312 GO:GO:0006614
SUPFAM:SSF47364 GO:GO:0005786 PDB:2HUG PDB:3UI2 PDBsum:2HUG
PDBsum:3UI2 TCDB:3.A.5.1.2 GO:GO:0080085 eggNOG:COG0541 KO:K03106
Gene3D:1.10.260.30 SUPFAM:SSF47446 EMBL:Z21970 EMBL:AF092168
EMBL:AY050999 EMBL:BT000976 IPI:IPI00538977 PIR:S36637
RefSeq:NP_196014.1 UniGene:At.435 ProteinModelPortal:P37107
SMR:P37107 DIP:DIP-752N IntAct:P37107 MINT:MINT-126488
STRING:P37107 PaxDb:P37107 PRIDE:P37107 ProMEX:P37107
EnsemblPlants:AT5G03940.1 GeneID:830273 KEGG:ath:AT5G03940
GeneFarm:1888 TAIR:At5g03940 HOGENOM:HOG000036164 InParanoid:P37107
OMA:DSGKTEQ PhylomeDB:P37107 ProtClustDB:CLSN2686225
EvolutionaryTrace:P37107 Genevestigator:P37107 GermOnline:AT5G03940
PANTHER:PTHR11564:SF7 TIGRFAMs:TIGR00959 Uniprot:P37107
Length = 564
Score = 183 (69.5 bits), Expect = 6.5e-11, P = 6.5e-11
Identities = 49/198 (24%), Positives = 98/198 (49%)
Query: 314 TGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLA 373
TG + + + G+ L K ++ ++ ++ L+ +V+ + + +SV+ G +
Sbjct: 82 TGGLEAAWSKLKGEEVLTKDNIAEPMRDIRRALLEADVSLPVVRRFVQSVSDQAVGMGVI 141
Query: 374 SFTRISSIVQAAMEEALVRILTPRRSIDILRDVHAAKEQRKPYXXXXXXXXXXXKSTNLA 433
+ + + + LV+++ S ++ AK P K+T A
Sbjct: 142 RGVKPDQQLVKIVHDELVKLMGGEVS-----ELQFAKSG--PTVILLAGLQGVGKTTVCA 194
Query: 434 KVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEA 493
K+A +L + S M+ A D +R A++QL ++ VP++ G + PA +AK+ ++EA
Sbjct: 195 KLACYLKKQGKSCMLIAGDVYRPAAIDQLVILGEQVGVPVYTAGTDVKPADIAKQGLKEA 254
Query: 494 TRNGSDVVLVDTAGRMQV 511
+N DVV++DTAGR+Q+
Sbjct: 255 KKNNVDVVIMDTAGRLQI 272
>TIGR_CMR|CBU_1903 [details] [associations]
symbol:CBU_1903 "signal recognition particle-docking
protein FtsY" species:227377 "Coxiella burnetii RSA 493"
[GO:0003924 "GTPase activity" evidence=ISS] [GO:0005047 "signal
recognition particle binding" evidence=ISS] [GO:0009306 "protein
secretion" evidence=ISS] HAMAP:MF_00920 InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR004390 InterPro:IPR013822
Pfam:PF00448 Pfam:PF02881 PROSITE:PS00300 SMART:SM00382
SMART:SM00962 SMART:SM00963 GO:GO:0005525 GO:GO:0005737
GO:GO:0051301 GO:GO:0003924 EMBL:AE016828 GenomeReviews:AE016828_GR
GO:GO:0031226 HOGENOM:HOG000036278 KO:K03110 ProtClustDB:PRK10416
GO:GO:0006614 SUPFAM:SSF47364 TIGRFAMs:TIGR00064 OMA:NRIPDEL
RefSeq:NP_820880.1 HSSP:P10121 ProteinModelPortal:Q83AI3 SMR:Q83AI3
PRIDE:Q83AI3 GeneID:1209816 KEGG:cbu:CBU_1903 PATRIC:17932545
BioCyc:CBUR227377:GJ7S-1878-MONOMER Uniprot:Q83AI3
Length = 324
Score = 176 (67.0 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 57/217 (26%), Positives = 107/217 (49%)
Query: 305 KHNKPDAKKTGWFSSMFQSIA--------GKANL--DKADLEPAL-KALKDRLMTKNVAE 353
K+N+ K GW + +S+ G +NL K ++ +L + L+ L++ ++
Sbjct: 13 KNNETSKPKKGWLGRLNESLKRTRSRLTDGLSNLVLGKKTIDASLLEELEMILLSADIGI 72
Query: 354 EIAEKLCESVAASLEGKKLASFTRISSIVQAAMEEALVRILTP-RRSIDILRDVHAAKEQ 412
E + + +++ + K L+ +++ A E L+ IL P ++ ++I
Sbjct: 73 EATQSILNNLSQQVARKSLSD---PKALIDALKIE-LLNILEPCQKHLEI---------S 119
Query: 413 RKPYXXXXXXXXXXXKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVP 472
P+ K+T +AK+A++ K VM+AA DTFR+ A+EQL+T +R P
Sbjct: 120 ASPFVILTVGVNGVGKTTTIAKLAHFYQSQKKRVMLAAGDTFRAAAIEQLQTWGQRNNAP 179
Query: 473 IFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRM 509
+ + D A V +A++ AT D+++ DTAGR+
Sbjct: 180 VIAQQPGADSASVIYDAMEAATARHYDLLIADTAGRL 216
>UNIPROTKB|Q97QH0 [details] [associations]
symbol:ftsY "Signal recognition particle receptor FtsY"
species:170187 "Streptococcus pneumoniae TIGR4" [GO:0005515
"protein binding" evidence=IPI] HAMAP:MF_00920 InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR004390 InterPro:IPR013822
Pfam:PF00448 Pfam:PF02881 PROSITE:PS00300 SMART:SM00382
SMART:SM00962 SMART:SM00963 GO:GO:0005525 GO:GO:0005737
GO:GO:0003924 EMBL:AE005672 GenomeReviews:AE005672_GR GO:GO:0031226
HOGENOM:HOG000036278 KO:K03110 ProtClustDB:PRK10416 GO:GO:0006614
SUPFAM:SSF47364 TIGRFAMs:TIGR00064 HSSP:P83749 PIR:D95144
RefSeq:NP_345709.1 ProteinModelPortal:Q97QH0
EnsemblBacteria:EBSTRT00000026851 GeneID:931757 KEGG:spn:SP_1244
PATRIC:19706881 OMA:DEGKSVI Uniprot:Q97QH0
Length = 429
Score = 179 (68.1 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 58/186 (31%), Positives = 89/186 (47%)
Query: 328 ANLDKADLEPALKALKDRLMTKNVAEEIAEKLCESVA--ASLEGKKLASFTRISSIVQAA 385
AN D E + L++ L+ +V ++A L E + A LE K +++
Sbjct: 148 ANFRSVD-EEFFEELEELLIMSDVGVQVASNLTEELRYEAKLENAKKPD------VLRRV 200
Query: 386 MEEALVRILTPRRSIDILRDVHAAKEQRKPYXXXXXXXXXXXKSTNLAKVAYWLLQHKVS 445
+ E LV + S D +H Q K+T++ K+A+ Q
Sbjct: 201 IIEKLVELYEKDGSYD--ESIHF---QDNLTVMLFVGVNGVGKTTSIGKLAHRYKQAGKK 255
Query: 446 VMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEK-DPAIVAKEAIQEATRNGSDVVLVD 504
VM+ A DTFR+GAV QL RR+ VP+ G EK DPA V + ++ A G D++++D
Sbjct: 256 VMLVAADTFRAGAVAQLAEWGRRVDVPVVT-GPEKADPASVVFDGMERAVTEGIDILMID 314
Query: 505 TAGRMQ 510
TAGR+Q
Sbjct: 315 TAGRLQ 320
>TIGR_CMR|BA_3983 [details] [associations]
symbol:BA_3983 "signal recognition particle protein"
species:198094 "Bacillus anthracis str. Ames" [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0005048 "signal sequence binding"
evidence=ISS] [GO:0009306 "protein secretion" evidence=ISS]
[GO:0048501 "signal recognition particle, plasma membrane
targeting" evidence=ISS] HAMAP:MF_00306 InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR004125 InterPro:IPR004780
InterPro:IPR013822 InterPro:IPR022941 Pfam:PF00448 Pfam:PF02881
Pfam:PF02978 PROSITE:PS00300 SMART:SM00382 SMART:SM00962
SMART:SM00963 GO:GO:0005525 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0003924 GO:GO:0006184 GO:GO:0008312
GO:GO:0006614 SUPFAM:SSF47364 GO:GO:0005786 KO:K03106
Gene3D:1.10.260.30 SUPFAM:SSF47446 HOGENOM:HOG000036164
PANTHER:PTHR11564:SF7 TIGRFAMs:TIGR00959 OMA:GQQVVKI
ProtClustDB:PRK10867 RefSeq:NP_846225.1 RefSeq:YP_020622.1
RefSeq:YP_029947.1 HSSP:O07347 ProteinModelPortal:Q81WJ2 SMR:Q81WJ2
EnsemblBacteria:EBBACT00000009811 EnsemblBacteria:EBBACT00000016655
EnsemblBacteria:EBBACT00000023730 GeneID:1087538 GeneID:2820002
GeneID:2848277 KEGG:ban:BA_3983 KEGG:bar:GBAA_3983 KEGG:bat:BAS3696
BioCyc:BANT260799:GJAJ-3754-MONOMER
BioCyc:BANT261594:GJ7F-3871-MONOMER Uniprot:Q81WJ2
Length = 449
Score = 179 (68.1 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 49/192 (25%), Positives = 92/192 (47%)
Query: 322 QSIAGKANLDKADLEPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKK-LASFTRISS 380
Q I GK + +AD++ ++ ++ L+ +V ++ + + V+ G+ + S T
Sbjct: 15 QKIRGKGKVSEADVKEMMREVRLALLEADVNFKVVKDFVKRVSERAVGQDVMKSLTPGQQ 74
Query: 381 IVQAAMEEALVRILTPRRSIDILRDVHAAKEQRKPYXXXXXXXXXXXKSTNLAKVAYWLL 440
+++ EE L ++ +S A + P K+T K+A L
Sbjct: 75 VIKVVQEE-LTELMGGEQS-------KIAIANKPPTVIMMVGLQGAGKTTTTGKLANLLR 126
Query: 441 Q-HKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSD 499
+ H M+ A D +R A++QL T ++L +P+F G + P +AK+AI +A + D
Sbjct: 127 KKHNRKPMLVAADIYRPAAIKQLETLGKQLDMPVFSLGDQVSPVEIAKQAIAKAKEDHHD 186
Query: 500 VVLVDTAGRMQV 511
VL+DTAG + +
Sbjct: 187 YVLIDTAGHLHI 198
>TIGR_CMR|CHY_1442 [details] [associations]
symbol:CHY_1442 "signal recognition particle-docking
protein FtsY" species:246194 "Carboxydothermus hydrogenoformans
Z-2901" [GO:0003924 "GTPase activity" evidence=ISS] [GO:0005047
"signal recognition particle binding" evidence=ISS] [GO:0009306
"protein secretion" evidence=ISS] HAMAP:MF_00920 InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR004390 InterPro:IPR013822
Pfam:PF00448 Pfam:PF02881 PROSITE:PS00300 SMART:SM00382
SMART:SM00962 SMART:SM00963 GO:GO:0005525 GO:GO:0005737
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0003924 GO:GO:0031226
eggNOG:COG0552 KO:K03110 GO:GO:0006614 SUPFAM:SSF47364
TIGRFAMs:TIGR00064 RefSeq:YP_360274.1 ProteinModelPortal:Q3AC60
SMR:Q3AC60 STRING:Q3AC60 GeneID:3728659 KEGG:chy:CHY_1442
PATRIC:21276015 HOGENOM:HOG000036277 OMA:NRIPDEL
BioCyc:CHYD246194:GJCN-1441-MONOMER Uniprot:Q3AC60
Length = 303
Score = 174 (66.3 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 50/175 (28%), Positives = 85/175 (48%)
Query: 342 LKDRLMTKNVAEEIAEKLCESVAASLEGKKLASFTRISSIVQAAMEEALVRILTPRRSI- 400
++D V EE+ EKL E + G K S + + + A E + ++ +
Sbjct: 22 IEDVFKKSTVDEELFEKLEEILIEGDVGVK-PSLELVEKLRKTARERRITDSEQLKQVLK 80
Query: 401 -DILRDVHAAKEQ-----RKPYXXXXXXXXXXXKSTNLAKVAYWLLQHKVSVMMAACDTF 454
+IL+ + A + R P K+T + K+AY+ Q V++AA DTF
Sbjct: 81 EEILKILEAGDNKLKNVPRTPLVILVVGVNGVGKTTTIGKLAYYFKQQGKQVLLAAGDTF 140
Query: 455 RSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRM 509
R+ A+EQL ++ P+ ++ DPA VA +A++ A DV+++DTAGR+
Sbjct: 141 RAAAIEQLEIWGNKVGCPVIKQKEGSDPAAVAFDAVKAAIARKIDVLIIDTAGRL 195
>UNIPROTKB|Q2T9U1 [details] [associations]
symbol:SRP54 "Signal recognition particle 54 kDa protein"
species:9913 "Bos taurus" [GO:0042493 "response to drug"
evidence=ISS] [GO:0045047 "protein targeting to ER" evidence=ISS]
[GO:0003924 "GTPase activity" evidence=ISS] [GO:0005525 "GTP
binding" evidence=ISS] [GO:0008144 "drug binding" evidence=ISS]
[GO:0008312 "7S RNA binding" evidence=ISS] [GO:0019003 "GDP
binding" evidence=ISS] [GO:0030942 "endoplasmic reticulum signal
peptide binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005786 "signal recognition particle, endoplasmic reticulum
targeting" evidence=ISS] [GO:0043021 "ribonucleoprotein complex
binding" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0006614 "SRP-dependent cotranslational protein targeting to
membrane" evidence=IEA] InterPro:IPR000897 InterPro:IPR003593
InterPro:IPR004125 InterPro:IPR006325 InterPro:IPR013822
InterPro:IPR022941 Pfam:PF00448 Pfam:PF02881 Pfam:PF02978
PROSITE:PS00300 SMART:SM00382 SMART:SM00962 SMART:SM00963
GO:GO:0005525 GO:GO:0005634 GO:GO:0042493 GO:GO:0008144
GO:GO:0003924 GO:GO:0043021 GO:GO:0019003 GO:GO:0008312
GO:GO:0006614 SUPFAM:SSF47364 GO:GO:0045047 GO:GO:0005786
eggNOG:COG0541 HOGENOM:HOG000036165 KO:K03106 Gene3D:1.10.260.30
SUPFAM:SSF47446 TIGRFAMs:TIGR01425 GO:GO:0030942 EMBL:BC111270
IPI:IPI00698247 RefSeq:NP_001033290.1 UniGene:Bt.36654 HSSP:Q6MTB9
ProteinModelPortal:Q2T9U1 SMR:Q2T9U1 STRING:Q2T9U1 PRIDE:Q2T9U1
Ensembl:ENSBTAT00000025405 GeneID:614017 KEGG:bta:614017 CTD:6729
GeneTree:ENSGT00550000074824 HOVERGEN:HBG061072 InParanoid:Q2T9U1
OMA:GQQVVKI OrthoDB:EOG45MN54 NextBio:20898897 Uniprot:Q2T9U1
Length = 504
Score = 179 (68.1 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 46/192 (23%), Positives = 99/192 (51%)
Query: 318 SSMFQSIAGKANLDKADLEPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLASFTR 377
+S +S++ +++ L LK + L+ +V ++ ++L E+V ++++ +++AS
Sbjct: 11 TSALRSLSNATIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENVKSAIDLEEMASGLN 70
Query: 378 ISSIVQAAMEEALVRILTPRRSIDILRDVHA-AKEQRKPYXXXXXXXXXXXKSTNLAKVA 436
++Q A+ + LV+++ P V A + K K+T +K+A
Sbjct: 71 KRKMIQHAVFKELVKLVDP--------GVKAWTPTKGKQNVIMFVGLQGSGKTTTCSKLA 122
Query: 437 YWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRN 496
Y+ + + DTFR+GA +QL+ +A + ++P + E DP I+A E +++
Sbjct: 123 YYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGVEKFKNE 182
Query: 497 GSDVVLVDTAGR 508
++++VDT+GR
Sbjct: 183 NFEIIIVDTSGR 194
>UNIPROTKB|P61010 [details] [associations]
symbol:SRP54 "Signal recognition particle 54 kDa protein"
species:9615 "Canis lupus familiaris" [GO:0005829 "cytosol"
evidence=TAS] [GO:0030942 "endoplasmic reticulum signal peptide
binding" evidence=ISS;IMP] [GO:0042493 "response to drug"
evidence=ISS] [GO:0045047 "protein targeting to ER"
evidence=ISS;IMP] [GO:0003924 "GTPase activity" evidence=ISS]
[GO:0005525 "GTP binding" evidence=ISS] [GO:0008144 "drug binding"
evidence=ISS] [GO:0008312 "7S RNA binding" evidence=ISS]
[GO:0019003 "GDP binding" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005786 "signal recognition particle, endoplasmic
reticulum targeting" evidence=ISS] [GO:0006616 "SRP-dependent
cotranslational protein targeting to membrane, translocation"
evidence=IDA] [GO:0006617 "SRP-dependent cotranslational protein
targeting to membrane, signal sequence recognition" evidence=IMP]
[GO:0043021 "ribonucleoprotein complex binding" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] Reactome:REACT_86357
InterPro:IPR000897 InterPro:IPR003593 InterPro:IPR004125
InterPro:IPR006325 InterPro:IPR013822 InterPro:IPR022941
Pfam:PF00448 Pfam:PF02881 Pfam:PF02978 PROSITE:PS00300
SMART:SM00382 SMART:SM00962 SMART:SM00963 GO:GO:0005525
GO:GO:0005829 GO:GO:0005634 GO:GO:0042493 GO:GO:0008144
GO:GO:0003924 GO:GO:0043021 GO:GO:0019003 GO:GO:0008312
SUPFAM:SSF47364 GO:GO:0006616 GO:GO:0005786 GO:GO:0006617
eggNOG:COG0541 HOGENOM:HOG000036165 KO:K03106 Gene3D:1.10.260.30
SUPFAM:SSF47446 TIGRFAMs:TIGR01425 Reactome:REACT_146484
GO:GO:0030942 PDB:2J37 PDBsum:2J37 CTD:6729
GeneTree:ENSGT00550000074824 HOVERGEN:HBG061072 OMA:GQQVVKI
OrthoDB:EOG45MN54 EMBL:X16318 PIR:S05197 RefSeq:NP_001003272.1
UniGene:Cfa.3810 PDB:2GO5 PDBsum:2GO5 ProteinModelPortal:P61010
SMR:P61010 STRING:P61010 PRIDE:P61010 Ensembl:ENSCAFT00000021158
GeneID:403953 KEGG:cfa:403953 InParanoid:P61010
EvolutionaryTrace:P61010 NextBio:20817443 Uniprot:P61010
Length = 504
Score = 179 (68.1 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 46/192 (23%), Positives = 99/192 (51%)
Query: 318 SSMFQSIAGKANLDKADLEPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLASFTR 377
+S +S++ +++ L LK + L+ +V ++ ++L E+V ++++ +++AS
Sbjct: 11 TSALRSLSNATIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENVKSAIDLEEMASGLN 70
Query: 378 ISSIVQAAMEEALVRILTPRRSIDILRDVHA-AKEQRKPYXXXXXXXXXXXKSTNLAKVA 436
++Q A+ + LV+++ P V A + K K+T +K+A
Sbjct: 71 KRKMIQHAVFKELVKLVDP--------GVKAWTPTKGKQNVIMFVGLQGSGKTTTCSKLA 122
Query: 437 YWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRN 496
Y+ + + DTFR+GA +QL+ +A + ++P + E DP I+A E +++
Sbjct: 123 YYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGVEKFKNE 182
Query: 497 GSDVVLVDTAGR 508
++++VDT+GR
Sbjct: 183 NFEIIIVDTSGR 194
>UNIPROTKB|P61011 [details] [associations]
symbol:SRP54 "Signal recognition particle 54 kDa protein"
species:9606 "Homo sapiens" [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0008144 "drug
binding" evidence=IDA] [GO:0006617 "SRP-dependent cotranslational
protein targeting to membrane, signal sequence recognition"
evidence=ISS] [GO:0030942 "endoplasmic reticulum signal peptide
binding" evidence=IDA] [GO:0008312 "7S RNA binding" evidence=IDA]
[GO:0006616 "SRP-dependent cotranslational protein targeting to
membrane, translocation" evidence=ISS] [GO:0005525 "GTP binding"
evidence=IDA] [GO:0019003 "GDP binding" evidence=IDA] [GO:0003924
"GTPase activity" evidence=IDA] [GO:0005786 "signal recognition
particle, endoplasmic reticulum targeting" evidence=IDA]
[GO:0042493 "response to drug" evidence=IDA] [GO:0045047 "protein
targeting to ER" evidence=IMP] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006614
"SRP-dependent cotranslational protein targeting to membrane"
evidence=IC;TAS] [GO:0043021 "ribonucleoprotein complex binding"
evidence=IDA] [GO:0005829 "cytosol" evidence=TAS] [GO:0006412
"translation" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0044267 "cellular protein metabolic process"
evidence=TAS] [GO:0006184 "GTP catabolic process" evidence=IDA]
Reactome:REACT_71 Reactome:REACT_17015 InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR004125 InterPro:IPR006325
InterPro:IPR013822 InterPro:IPR022941 Pfam:PF00448 Pfam:PF02881
Pfam:PF02978 PROSITE:PS00300 SMART:SM00382 SMART:SM00962
SMART:SM00963 GO:GO:0005525 GO:GO:0005829 GO:GO:0005730
GO:GO:0042493 GO:GO:0006412 GO:GO:0016607 GO:GO:0008144
GO:GO:0003924 GO:GO:0006184 GO:GO:0043021 GO:GO:0019003
TCDB:3.A.5.9.1 GO:GO:0008312 SUPFAM:SSF47364 GO:GO:0006616
GO:GO:0005786 GO:GO:0006617 eggNOG:COG0541 HOGENOM:HOG000036165
KO:K03106 Gene3D:1.10.260.30 SUPFAM:SSF47446 TIGRFAMs:TIGR01425
GO:GO:0030942 PDB:1MFQ PDBsum:1MFQ CTD:6729 HOVERGEN:HBG061072
OMA:GQQVVKI OrthoDB:EOG45MN54 EMBL:X86373 EMBL:U51920 EMBL:AK300824
EMBL:AK312853 EMBL:AL049776 EMBL:BC000652 EMBL:BC003389
IPI:IPI00009822 IPI:IPI00929464 PIR:S54143 RefSeq:NP_001139754.1
RefSeq:NP_003127.1 UniGene:Hs.167535 PDB:1QB2 PDBsum:1QB2
ProteinModelPortal:P61011 SMR:P61011 IntAct:P61011 STRING:P61011
PhosphoSite:P61011 DMDM:46577650 PaxDb:P61011 PRIDE:P61011
DNASU:6729 Ensembl:ENST00000216774 Ensembl:ENST00000546080
Ensembl:ENST00000556994 GeneID:6729 KEGG:hsa:6729 UCSC:uc001wso.3
GeneCards:GC14P035452 HGNC:HGNC:11301 HPA:HPA048977 MIM:604857
neXtProt:NX_P61011 PharmGKB:PA36125 InParanoid:P61011
PhylomeDB:P61011 ChiTaRS:SRP54 EvolutionaryTrace:P61011
GenomeRNAi:6729 NextBio:26248 ArrayExpress:P61011 Bgee:P61011
CleanEx:HS_SRP54 Genevestigator:P61011 GermOnline:ENSG00000100883
Uniprot:P61011
Length = 504
Score = 179 (68.1 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 46/192 (23%), Positives = 99/192 (51%)
Query: 318 SSMFQSIAGKANLDKADLEPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLASFTR 377
+S +S++ +++ L LK + L+ +V ++ ++L E+V ++++ +++AS
Sbjct: 11 TSALRSLSNATIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENVKSAIDLEEMASGLN 70
Query: 378 ISSIVQAAMEEALVRILTPRRSIDILRDVHA-AKEQRKPYXXXXXXXXXXXKSTNLAKVA 436
++Q A+ + LV+++ P V A + K K+T +K+A
Sbjct: 71 KRKMIQHAVFKELVKLVDP--------GVKAWTPTKGKQNVIMFVGLQGSGKTTTCSKLA 122
Query: 437 YWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRN 496
Y+ + + DTFR+GA +QL+ +A + ++P + E DP I+A E +++
Sbjct: 123 YYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGVEKFKNE 182
Query: 497 GSDVVLVDTAGR 508
++++VDT+GR
Sbjct: 183 NFEIIIVDTSGR 194
>UNIPROTKB|F2Z5M9 [details] [associations]
symbol:SRP54 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043021 "ribonucleoprotein complex binding"
evidence=IEA] [GO:0042493 "response to drug" evidence=IEA]
[GO:0030942 "endoplasmic reticulum signal peptide binding"
evidence=IEA] [GO:0019003 "GDP binding" evidence=IEA] [GO:0008144
"drug binding" evidence=IEA] [GO:0005786 "signal recognition
particle, endoplasmic reticulum targeting" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0008312 "7S RNA binding"
evidence=IEA] [GO:0006614 "SRP-dependent cotranslational protein
targeting to membrane" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
HAMAP:MF_00306 InterPro:IPR000897 InterPro:IPR003593
InterPro:IPR004125 InterPro:IPR006325 InterPro:IPR013822
InterPro:IPR022941 Pfam:PF00448 Pfam:PF02881 Pfam:PF02978
PROSITE:PS00300 SMART:SM00382 SMART:SM00962 SMART:SM00963
GO:GO:0005525 GO:GO:0005634 GO:GO:0042493 GO:GO:0008144
GO:GO:0003924 GO:GO:0043021 GO:GO:0019003 GO:GO:0008312
GO:GO:0006614 SUPFAM:SSF47364 GO:GO:0005786 KO:K03106
Gene3D:1.10.260.30 SUPFAM:SSF47446 TIGRFAMs:TIGR01425 GO:GO:0030942
CTD:6729 GeneTree:ENSGT00550000074824 OMA:GQQVVKI EMBL:CU469145
RefSeq:XP_001927834.3 ProteinModelPortal:F2Z5M9 SMR:F2Z5M9
PRIDE:F2Z5M9 Ensembl:ENSSSCT00000002187 GeneID:100154361
KEGG:ssc:100154361 Uniprot:F2Z5M9
Length = 504
Score = 179 (68.1 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 46/192 (23%), Positives = 99/192 (51%)
Query: 318 SSMFQSIAGKANLDKADLEPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLASFTR 377
+S +S++ +++ L LK + L+ +V ++ ++L E+V ++++ +++AS
Sbjct: 11 TSALRSLSNATIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENVKSAIDLEEMASGLN 70
Query: 378 ISSIVQAAMEEALVRILTPRRSIDILRDVHA-AKEQRKPYXXXXXXXXXXXKSTNLAKVA 436
++Q A+ + LV+++ P V A + K K+T +K+A
Sbjct: 71 KRKMIQHAVFKELVKLVDP--------GVKAWTPTKGKQNVIMFVGLQGSGKTTTCSKLA 122
Query: 437 YWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRN 496
Y+ + + DTFR+GA +QL+ +A + ++P + E DP I+A E +++
Sbjct: 123 YYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGVEKFKNE 182
Query: 497 GSDVVLVDTAGR 508
++++VDT+GR
Sbjct: 183 NFEIIIVDTSGR 194
>UNIPROTKB|Q4R965 [details] [associations]
symbol:SRP54 "Signal recognition particle 54 kDa protein"
species:9541 "Macaca fascicularis" [GO:0005525 "GTP binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005786
"signal recognition particle, endoplasmic reticulum targeting"
evidence=ISS] [GO:0006184 "GTP catabolic process" evidence=ISS]
[GO:0008144 "drug binding" evidence=ISS] [GO:0008312 "7S RNA
binding" evidence=ISS] [GO:0019003 "GDP binding" evidence=ISS]
[GO:0030942 "endoplasmic reticulum signal peptide binding"
evidence=ISS] [GO:0042493 "response to drug" evidence=ISS]
[GO:0045047 "protein targeting to ER" evidence=ISS] [GO:0003924
"GTPase activity" evidence=ISS] InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR004125 InterPro:IPR006325
InterPro:IPR013822 InterPro:IPR022941 Pfam:PF00448 Pfam:PF02881
Pfam:PF02978 PROSITE:PS00300 SMART:SM00382 SMART:SM00962
SMART:SM00963 GO:GO:0005525 GO:GO:0005634 GO:GO:0042493
GO:GO:0016607 GO:GO:0008144 GO:GO:0003924 GO:GO:0006184
GO:GO:0019003 GO:GO:0008312 GO:GO:0006614 SUPFAM:SSF47364
GO:GO:0045047 GO:GO:0005786 Gene3D:1.10.260.30 SUPFAM:SSF47446
TIGRFAMs:TIGR01425 GO:GO:0030942 HOVERGEN:HBG061072 EMBL:AB168231
ProteinModelPortal:Q4R965 SMR:Q4R965 PRIDE:Q4R965 Uniprot:Q4R965
Length = 504
Score = 179 (68.1 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 46/192 (23%), Positives = 99/192 (51%)
Query: 318 SSMFQSIAGKANLDKADLEPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLASFTR 377
+S +S++ +++ L LK + L+ +V ++ ++L E+V ++++ +++AS
Sbjct: 11 TSALRSLSNATIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENVKSAIDLEEMASGLN 70
Query: 378 ISSIVQAAMEEALVRILTPRRSIDILRDVHA-AKEQRKPYXXXXXXXXXXXKSTNLAKVA 436
++Q A+ + LV+++ P V A + K K+T +K+A
Sbjct: 71 KRKMIQHAVFKELVKLVDP--------GVKAWTPTKGKQNVIMFVGLQGSGKTTTCSKLA 122
Query: 437 YWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRN 496
Y+ + + DTFR+GA +QL+ +A + ++P + E DP I+A E +++
Sbjct: 123 YYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGVEKFKNE 182
Query: 497 GSDVVLVDTAGR 508
++++VDT+GR
Sbjct: 183 NFEIIIVDTSGR 194
>UNIPROTKB|Q5R4R6 [details] [associations]
symbol:SRP54 "Signal recognition particle 54 kDa protein"
species:9601 "Pongo abelii" [GO:0005525 "GTP binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0005786 "signal recognition
particle, endoplasmic reticulum targeting" evidence=ISS]
[GO:0006184 "GTP catabolic process" evidence=ISS] [GO:0008144 "drug
binding" evidence=ISS] [GO:0008312 "7S RNA binding" evidence=ISS]
[GO:0019003 "GDP binding" evidence=ISS] [GO:0030942 "endoplasmic
reticulum signal peptide binding" evidence=ISS] [GO:0042493
"response to drug" evidence=ISS] [GO:0045047 "protein targeting to
ER" evidence=ISS] [GO:0003924 "GTPase activity" evidence=ISS]
InterPro:IPR000897 InterPro:IPR003593 InterPro:IPR004125
InterPro:IPR006325 InterPro:IPR013822 InterPro:IPR022941
Pfam:PF00448 Pfam:PF02881 Pfam:PF02978 PROSITE:PS00300
SMART:SM00382 SMART:SM00962 SMART:SM00963 GO:GO:0005525
GO:GO:0005634 GO:GO:0042493 GO:GO:0016607 GO:GO:0008144
GO:GO:0003924 GO:GO:0006184 GO:GO:0019003 GO:GO:0008312
GO:GO:0006614 SUPFAM:SSF47364 GO:GO:0045047 GO:GO:0005786 KO:K03106
Gene3D:1.10.260.30 SUPFAM:SSF47446 TIGRFAMs:TIGR01425 GO:GO:0030942
CTD:6729 HOVERGEN:HBG061072 EMBL:CR861178 RefSeq:NP_001126912.1
UniGene:Pab.3814 ProteinModelPortal:Q5R4R6 SMR:Q5R4R6 PRIDE:Q5R4R6
GeneID:100173929 KEGG:pon:100173929 InParanoid:Q5R4R6
Uniprot:Q5R4R6
Length = 504
Score = 179 (68.1 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 46/192 (23%), Positives = 99/192 (51%)
Query: 318 SSMFQSIAGKANLDKADLEPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLASFTR 377
+S +S++ +++ L LK + L+ +V ++ ++L E+V ++++ +++AS
Sbjct: 11 TSALRSLSNATIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENVKSAIDLEEMASGLN 70
Query: 378 ISSIVQAAMEEALVRILTPRRSIDILRDVHA-AKEQRKPYXXXXXXXXXXXKSTNLAKVA 436
++Q A+ + LV+++ P V A + K K+T +K+A
Sbjct: 71 KRKMIQHAVFKELVKLVDP--------GVKAWTPTKGKQNVIMFVGLQGSGKTTTCSKLA 122
Query: 437 YWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRN 496
Y+ + + DTFR+GA +QL+ +A + ++P + E DP I+A E +++
Sbjct: 123 YYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGVEKFKNE 182
Query: 497 GSDVVLVDTAGR 508
++++VDT+GR
Sbjct: 183 NFEIIIVDTSGR 194
>RGD|2323636 [details] [associations]
symbol:Fam177a1 "family with sequence similarity 177, member A1"
species:10116 "Rattus norvegicus" [GO:0003924 "GTPase activity"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0006614
"SRP-dependent cotranslational protein targeting to membrane"
evidence=IEA] [GO:0008312 "7S RNA binding" evidence=IEA]
[GO:0048500 "signal recognition particle" evidence=IEA]
HAMAP:MF_00306 InterPro:IPR000897 InterPro:IPR003593
InterPro:IPR004125 InterPro:IPR006325 InterPro:IPR013822
InterPro:IPR022941 Pfam:PF00448 Pfam:PF02881 Pfam:PF02978
PROSITE:PS00300 SMART:SM00382 SMART:SM00962 SMART:SM00963
RGD:2323636 GO:GO:0005525 GO:GO:0003924 GO:GO:0006184 GO:GO:0008312
GO:GO:0006614 SUPFAM:SSF47364 GO:GO:0005786 Gene3D:1.10.260.30
SUPFAM:SSF47446 TIGRFAMs:TIGR01425 GeneTree:ENSGT00550000074824
IPI:IPI00387699 PRIDE:F1M7P5 Ensembl:ENSRNOT00000052076
ArrayExpress:F1M7P5 Uniprot:F1M7P5
Length = 500
Score = 178 (67.7 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 46/192 (23%), Positives = 99/192 (51%)
Query: 318 SSMFQSIAGKANLDKADLEPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLASFTR 377
+S +S++ +++ L LK + L+ +V ++ ++L E+V ++++ +++AS
Sbjct: 11 TSALRSLSNATIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENVKSAIDLEEMASGLN 70
Query: 378 ISSIVQAAMEEALVRILTPRRSIDILRDVHA-AKEQRKPYXXXXXXXXXXXKSTNLAKVA 436
++Q A+ + LV+++ P V A + K K+T +K+A
Sbjct: 71 KRKMIQHAVFKELVKLVDP--------GVKAWTPTKGKQNVIMFVGLQGSGKTTTCSKLA 122
Query: 437 YWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRN 496
Y+ + + DTFR+GA +QL+ +A + ++P + E DP I+A E +++
Sbjct: 123 YFYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGVEKFKNE 182
Query: 497 GSDVVLVDTAGR 508
++++VDT+GR
Sbjct: 183 NFEIIIVDTSGR 194
>RGD|621390 [details] [associations]
symbol:Srp54 "signal recognition particle 54A" species:10116
"Rattus norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0003924 "GTPase activity" evidence=IEA;ISO] [GO:0005525 "GTP
binding" evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005786 "signal recognition particle, endoplasmic
reticulum targeting" evidence=IEA;ISO] [GO:0006184 "GTP catabolic
process" evidence=ISO] [GO:0006614 "SRP-dependent cotranslational
protein targeting to membrane" evidence=IEA] [GO:0008144 "drug
binding" evidence=IEA;ISO] [GO:0008150 "biological_process"
evidence=ND] [GO:0008312 "7S RNA binding" evidence=IEA;ISO]
[GO:0016607 "nuclear speck" evidence=IEA] [GO:0019003 "GDP binding"
evidence=IEA;ISO] [GO:0030942 "endoplasmic reticulum signal peptide
binding" evidence=IEA;ISO] [GO:0042493 "response to drug"
evidence=IEA;ISO] [GO:0043021 "ribonucleoprotein complex binding"
evidence=IEA;ISO] [GO:0045047 "protein targeting to ER"
evidence=ISO] InterPro:IPR000897 InterPro:IPR003593
InterPro:IPR004125 InterPro:IPR006325 InterPro:IPR013822
InterPro:IPR022941 Pfam:PF00448 Pfam:PF02881 Pfam:PF02978
PROSITE:PS00300 SMART:SM00382 SMART:SM00962 SMART:SM00963
RGD:621390 GO:GO:0005525 GO:GO:0042493 GO:GO:0016607 GO:GO:0008144
GO:GO:0003924 GO:GO:0043021 GO:GO:0019003 GO:GO:0008312
GO:GO:0006614 SUPFAM:SSF47364 GO:GO:0005786 eggNOG:COG0541
HOGENOM:HOG000036165 KO:K03106 Gene3D:1.10.260.30 SUPFAM:SSF47446
TIGRFAMs:TIGR01425 GO:GO:0030942 CTD:6729 HOVERGEN:HBG061072
OMA:GQQVVKI EMBL:BC079117 IPI:IPI00391089 RefSeq:NP_446323.1
UniGene:Rn.24880 ProteinModelPortal:Q6AYB5 SMR:Q6AYB5 STRING:Q6AYB5
PRIDE:Q6AYB5 Ensembl:ENSRNOT00000049937 GeneID:116650
KEGG:rno:116650 UCSC:RGD:621390 InParanoid:Q6AYB5 NextBio:619403
ArrayExpress:Q6AYB5 Genevestigator:Q6AYB5
GermOnline:ENSRNOG00000032776 Uniprot:Q6AYB5
Length = 504
Score = 178 (67.7 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 46/192 (23%), Positives = 99/192 (51%)
Query: 318 SSMFQSIAGKANLDKADLEPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLASFTR 377
+S +S++ +++ L LK + L+ +V ++ ++L E+V ++++ +++AS
Sbjct: 11 TSALRSLSNATIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENVKSAIDLEEMASGLN 70
Query: 378 ISSIVQAAMEEALVRILTPRRSIDILRDVHA-AKEQRKPYXXXXXXXXXXXKSTNLAKVA 436
++Q A+ + LV+++ P V A + K K+T +K+A
Sbjct: 71 KRKMIQHAVFKELVKLVDP--------GVKAWTPTKGKQNVIMFVGLQGSGKTTTCSKLA 122
Query: 437 YWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRN 496
Y+ + + DTFR+GA +QL+ +A + ++P + E DP I+A E +++
Sbjct: 123 YFYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGVEKFKNE 182
Query: 497 GSDVVLVDTAGR 508
++++VDT+GR
Sbjct: 183 NFEIIIVDTSGR 194
>ZFIN|ZDB-GENE-040426-818 [details] [associations]
symbol:srp54 "signal recognition particle 54"
species:7955 "Danio rerio" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0048500 "signal recognition particle"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0006614 "SRP-dependent
cotranslational protein targeting to membrane" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0008312 "7S RNA
binding" evidence=IEA] HAMAP:MF_00306 InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR004125 InterPro:IPR006325
InterPro:IPR013822 InterPro:IPR022941 Pfam:PF00448 Pfam:PF02881
Pfam:PF02978 PROSITE:PS00300 SMART:SM00382 SMART:SM00962
SMART:SM00963 ZFIN:ZDB-GENE-040426-818 GO:GO:0005525 GO:GO:0003924
GO:GO:0006184 GO:GO:0008312 GO:GO:0006614 SUPFAM:SSF47364
eggNOG:COG0541 HOGENOM:HOG000036165 KO:K03106 Gene3D:1.10.260.30
SUPFAM:SSF47446 TIGRFAMs:TIGR01425 CTD:6729
GeneTree:ENSGT00550000074824 HOVERGEN:HBG061072 OMA:GQQVVKI
OrthoDB:EOG45MN54 GO:GO:0048500 HSSP:P70722 EMBL:BX088587
EMBL:BC045474 EMBL:BC067588 IPI:IPI00483938 RefSeq:NP_957282.1
UniGene:Dr.7990 SMR:Q7ZVN5 STRING:Q7ZVN5 Ensembl:ENSDART00000018678
Ensembl:ENSDART00000133424 GeneID:393963 KEGG:dre:393963
InParanoid:Q7ZVN5 NextBio:20814934 Uniprot:Q7ZVN5
Length = 504
Score = 178 (67.7 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 47/192 (24%), Positives = 99/192 (51%)
Query: 318 SSMFQSIAGKANLDKADLEPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLASFTR 377
+S +S++ +++ L LK + L+ +V ++ ++L E+V A+++ +++AS
Sbjct: 11 TSALRSLSNATIINEEVLNAMLKEVCAALLEADVNIKLVKQLRENVKAAIDLEEMASGLN 70
Query: 378 ISSIVQAAMEEALVRILTPRRSIDILRDVHA-AKEQRKPYXXXXXXXXXXXKSTNLAKVA 436
++Q A+ + LV+++ P V A + K K+T +K+A
Sbjct: 71 KRRMIQHAVFKELVKLVDP--------GVKAWTPTKGKNNVIMFVGLQGSGKTTTCSKLA 122
Query: 437 YWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRN 496
Y+ + + DTFR+GA +QL+ +A + ++P + E DP I+A E +++
Sbjct: 123 YYFQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIAAEGVEKFKSE 182
Query: 497 GSDVVLVDTAGR 508
++++VDT+GR
Sbjct: 183 NFEIIIVDTSGR 194
>TIGR_CMR|ECH_1111 [details] [associations]
symbol:ECH_1111 "signal recognition particle-docking
protein FtsY" species:205920 "Ehrlichia chaffeensis str. Arkansas"
[GO:0003924 "GTPase activity" evidence=ISS] [GO:0005047 "signal
recognition particle binding" evidence=ISS] [GO:0009306 "protein
secretion" evidence=ISS] InterPro:IPR000897 InterPro:IPR003593
InterPro:IPR004390 InterPro:IPR013822 Pfam:PF00448 Pfam:PF02881
SMART:SM00382 SMART:SM00962 SMART:SM00963 GO:GO:0005525
EMBL:CP000236 GenomeReviews:CP000236_GR GO:GO:0006184 GO:GO:0017111
eggNOG:COG0552 HOGENOM:HOG000036278 KO:K03110 ProtClustDB:PRK10416
GO:GO:0006614 SUPFAM:SSF47364 TIGRFAMs:TIGR00064 RefSeq:YP_507895.1
ProteinModelPortal:Q2GF88 STRING:Q2GF88 GeneID:3927733
KEGG:ech:ECH_1111 PATRIC:20577558 OMA:ADMGVET
BioCyc:ECHA205920:GJNR-1114-MONOMER Uniprot:Q2GF88
Length = 310
Score = 171 (65.3 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 57/207 (27%), Positives = 101/207 (48%)
Query: 310 DAKKTGWFSSMFQSIAGKANLDKADLEPALKAL--KDRLMTKNVAEEIAEKLCESVA--- 364
DA G+FS++ + + K + + L +K + + + + EE+ E L +
Sbjct: 3 DATNKGFFSNIKKGLF-KTS---SKLSDGIKKIFSSGKKVDQETLEELKELLITADVGYD 58
Query: 365 -ASLEGKKLASFTRISSIVQAAMEEALVRILTPRRSIDILRDVHAAKE-QRKPYXXXXXX 422
ASL +KLAS T+ + + +++ L + +IL V KP+
Sbjct: 59 NASLLTQKLAS-TKFNEMDDNTVKQKLAESIE-----NILLQVEKPLSINNKPHVIMVCG 112
Query: 423 XXXXXKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDP 482
K+T + K+A+ V++AACDTFR+ A EQL ++++ P+ D
Sbjct: 113 TNGNGKTTTIGKLAHRFKNTGKKVLVAACDTFRAAATEQLIVWSQKVNFPVVTGNQGADA 172
Query: 483 AIVAKEAIQEATRNGSDVVLVDTAGRM 509
A +A +A+Q+A +DV+L+DTAGR+
Sbjct: 173 ASIAYQAMQQALNEQTDVLLIDTAGRL 199
>UNIPROTKB|E1C6G6 [details] [associations]
symbol:SRP54 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003924 "GTPase activity" evidence=IEA] [GO:0005525
"GTP binding" evidence=IEA] [GO:0006614 "SRP-dependent
cotranslational protein targeting to membrane" evidence=IEA]
[GO:0008312 "7S RNA binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0005786 "signal recognition particle, endoplasmic
reticulum targeting" evidence=IEA] [GO:0008144 "drug binding"
evidence=IEA] [GO:0019003 "GDP binding" evidence=IEA] [GO:0030942
"endoplasmic reticulum signal peptide binding" evidence=IEA]
[GO:0042493 "response to drug" evidence=IEA] [GO:0043021
"ribonucleoprotein complex binding" evidence=IEA] HAMAP:MF_00306
InterPro:IPR000897 InterPro:IPR003593 InterPro:IPR004125
InterPro:IPR006325 InterPro:IPR013822 InterPro:IPR022941
Pfam:PF00448 Pfam:PF02881 Pfam:PF02978 PROSITE:PS00300
SMART:SM00382 SMART:SM00962 SMART:SM00963 GO:GO:0005525
GO:GO:0005634 GO:GO:0042493 GO:GO:0008144 GO:GO:0003924
GO:GO:0043021 GO:GO:0019003 GO:GO:0008312 GO:GO:0006614
SUPFAM:SSF47364 GO:GO:0005786 KO:K03106 Gene3D:1.10.260.30
SUPFAM:SSF47446 TIGRFAMs:TIGR01425 GO:GO:0030942 CTD:6729
GeneTree:ENSGT00550000074824 OMA:GQQVVKI EMBL:AADN02003392
IPI:IPI00581279 RefSeq:XP_421238.1 ProteinModelPortal:E1C6G6
PRIDE:E1C6G6 Ensembl:ENSGALT00000016327 GeneID:423322
KEGG:gga:423322 NextBio:20825811 Uniprot:E1C6G6
Length = 504
Score = 175 (66.7 bits), Expect = 4.0e-10, P = 4.0e-10
Identities = 45/192 (23%), Positives = 99/192 (51%)
Query: 318 SSMFQSIAGKANLDKADLEPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLASFTR 377
+S +S++ +++ L LK + L+ +V ++ ++L E+V ++++ +++AS
Sbjct: 11 TSALRSLSNATIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENVKSAIDLEEMASGLN 70
Query: 378 ISSIVQAAMEEALVRILTPRRSIDILRDVHA-AKEQRKPYXXXXXXXXXXXKSTNLAKVA 436
++Q A+ + LV+++ P V A + K K+T +K+A
Sbjct: 71 KRKMIQHAVFKELVKLVDP--------GVKAWTPTKGKQNIIMFVGLQGSGKTTTCSKLA 122
Query: 437 YWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRN 496
Y+ + + DT+R+GA +QL+ +A + ++P + E DP I+A E +++
Sbjct: 123 YFYQRKGWKTCLICADTYRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGVEKFKNE 182
Query: 497 GSDVVLVDTAGR 508
++++VDT+GR
Sbjct: 183 NFEIIIVDTSGR 194
>TIGR_CMR|CHY_1434 [details] [associations]
symbol:CHY_1434 "signal recognition particle protein"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0003924 "GTPase activity" evidence=ISS] [GO:0005048 "signal
sequence binding" evidence=ISS] [GO:0009306 "protein secretion"
evidence=ISS] [GO:0048501 "signal recognition particle, plasma
membrane targeting" evidence=ISS] HAMAP:MF_00306 InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR004125 InterPro:IPR004780
InterPro:IPR013822 InterPro:IPR022941 Pfam:PF00448 Pfam:PF02881
Pfam:PF02978 PROSITE:PS00300 SMART:SM00382 SMART:SM00962
SMART:SM00963 GO:GO:0005525 EMBL:CP000141 GenomeReviews:CP000141_GR
GO:GO:0003924 GO:GO:0006184 GO:GO:0008312 GO:GO:0006614
SUPFAM:SSF47364 GO:GO:0005786 eggNOG:COG0541 HOGENOM:HOG000036165
KO:K03106 Gene3D:1.10.260.30 SUPFAM:SSF47446 PANTHER:PTHR11564:SF7
TIGRFAMs:TIGR00959 OMA:GQQVVKI RefSeq:YP_360266.1
ProteinModelPortal:Q3AC68 SMR:Q3AC68 STRING:Q3AC68 GeneID:3728502
KEGG:chy:CHY_1434 PATRIC:21275999
BioCyc:CHYD246194:GJCN-1433-MONOMER Uniprot:Q3AC68
Length = 446
Score = 172 (65.6 bits), Expect = 6.8e-10, P = 6.8e-10
Identities = 50/193 (25%), Positives = 91/193 (47%)
Query: 320 MFQSIAGKANLDKADLEPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKK-LASFTRI 378
+F+ + GK L + D+ AL+ ++ L+ +V ++ + V G + L S T
Sbjct: 13 VFKKLKGKGRLTEEDVNLALREVRIALLEADVNFQVVKDFIAKVKEKAVGHEVLESLTPG 72
Query: 379 SSIVQAAMEEALVRILTPRRSIDILRDVHAAKEQRKPYXXXXXXXXXXXKSTNLAKVAYW 438
+++ EE L+ ++ + L D + P K+T AK+AY
Sbjct: 73 QQVIKIVHEE-LINLMGKTNAK--LNDAGSP-----PTIIMLVGLQGAGKTTTAAKLAYL 124
Query: 439 LLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGS 498
L + ++ A D +R A++QL+ + VP+F G E+ P +AK +I A N
Sbjct: 125 LKKQGKKPLLVAADVYRPAAIKQLQVLGDTIDVPVFTMG-EQSPVDIAKASINFAKSNLK 183
Query: 499 DVVLVDTAGRMQV 511
+ V++DTAGR+ +
Sbjct: 184 NYVIIDTAGRLHI 196
>TIGR_CMR|CPS_4073 [details] [associations]
symbol:CPS_4073 "signal recognition particle protein"
species:167879 "Colwellia psychrerythraea 34H" [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0005786 "signal recognition particle,
endoplasmic reticulum targeting" evidence=ISS] [GO:0006617
"SRP-dependent cotranslational protein targeting to membrane,
signal sequence recognition" evidence=ISS] HAMAP:MF_00306
InterPro:IPR000897 InterPro:IPR003593 InterPro:IPR004125
InterPro:IPR004780 InterPro:IPR013822 InterPro:IPR022941
Pfam:PF00448 Pfam:PF02881 Pfam:PF02978 PROSITE:PS00300
SMART:SM00382 SMART:SM00962 SMART:SM00963 GO:GO:0005525
GO:GO:0003924 GO:GO:0006184 EMBL:CP000083 GenomeReviews:CP000083_GR
GO:GO:0008312 GO:GO:0006614 SUPFAM:SSF47364 GO:GO:0005786
eggNOG:COG0541 KO:K03106 Gene3D:1.10.260.30 SUPFAM:SSF47446
HOGENOM:HOG000036164 PANTHER:PTHR11564:SF7 TIGRFAMs:TIGR00959
OMA:GQQVVKI ProtClustDB:PRK10867 RefSeq:YP_270728.1
ProteinModelPortal:Q47WU4 SMR:Q47WU4 STRING:Q47WU4 GeneID:3519232
KEGG:cps:CPS_4073 PATRIC:21471017
BioCyc:CPSY167879:GI48-4086-MONOMER Uniprot:Q47WU4
Length = 463
Score = 172 (65.6 bits), Expect = 7.3e-10, P = 7.3e-10
Identities = 53/199 (26%), Positives = 94/199 (47%)
Query: 318 SSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA----EEIAEKLCESVAASLEGKKLA 373
S ++I+G+ L + +++ L+ ++ L+ +VA E K+ E + K L
Sbjct: 10 SKTLKNISGRGRLTEDNIKETLREVRMALLEADVALPVIREFIAKVKEKAVGTDVSKSLT 69
Query: 374 SFTRISSIVQAAMEEALVRILTPRRSIDILRDVHAAKEQRKPYXXXXXXXXXXXKSTNLA 433
IVQ +E A+ + +D+ AA P K+T++A
Sbjct: 70 PGQIFVKIVQKELESAMGEV---NEGLDL----RAAP----PAVVLMAGLQGAGKTTSVA 118
Query: 434 KVAYWLLQH-KVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQE 492
K+A +L + K V++ + D +R A++QL T A + V F ++ P +A AI
Sbjct: 119 KLAKFLTEREKKKVLVVSADVYRPAAIKQLETLAEEISVGFFPSDIKQKPIDIANAAIDH 178
Query: 493 ATRNGSDVVLVDTAGRMQV 511
A +N DV++VDTAGR+ +
Sbjct: 179 AKKNFYDVLIVDTAGRLHI 197
>TIGR_CMR|SPO_1339 [details] [associations]
symbol:SPO_1339 "signal recognition particle-docking
protein FtsY" species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003924
"GTPase activity" evidence=ISS] [GO:0009306 "protein secretion"
evidence=ISS] [GO:0048501 "signal recognition particle, plasma
membrane targeting" evidence=ISS] HAMAP:MF_00920 InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR004390 InterPro:IPR013822
Pfam:PF00448 Pfam:PF02881 SMART:SM00382 SMART:SM00962 SMART:SM00963
GO:GO:0005525 GO:GO:0005737 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0003924 GO:GO:0031226 HOGENOM:HOG000036278 KO:K03110
GO:GO:0006614 SUPFAM:SSF47364 TIGRFAMs:TIGR00064 OMA:ADMGVET
RefSeq:YP_166581.1 ProteinModelPortal:Q5LTS4 SMR:Q5LTS4
GeneID:3192959 KEGG:sil:SPO1339 PATRIC:23375989 Uniprot:Q5LTS4
Length = 390
Score = 170 (64.9 bits), Expect = 8.4e-10, P = 8.4e-10
Identities = 51/186 (27%), Positives = 95/186 (51%)
Query: 326 GKANLDKADLEP-ALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLASFTRISSIVQA 384
G A + + L+ L+ L++ L+ ++ + A ++ ++A G+KL++ ++A
Sbjct: 107 GGATVVRRTLDDDMLEQLEELLIAADMGVDTALRVTANMAEGRIGRKLST-----QEIKA 161
Query: 385 AMEEALVRILTPRRSIDILRDVHAAKEQRKPYXXXXXXXXXXXKSTNLAKVAYWLLQHKV 444
+ + + RI+ P + R + ++P K+T + K+A
Sbjct: 162 LLAQEITRIMEP-----VARPMPLYP--KRPQVVLVVGVNGSGKTTTIGKLASQFKAAGK 214
Query: 445 SVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVD 504
V++AA DTFR+ AVEQL+ R VP+ DPA +A +A+ A +G+D++L+D
Sbjct: 215 KVVIAAGDTFRAAAVEQLQVWGDRAGVPVLTAPEGSDPASLAFDAMTRAQEDGADLLLID 274
Query: 505 TAGRMQ 510
TAGR+Q
Sbjct: 275 TAGRLQ 280
>TIGR_CMR|SO_4586 [details] [associations]
symbol:SO_4586 "signal recognition particle-docking protein
FtsY" species:211586 "Shewanella oneidensis MR-1" [GO:0003924
"GTPase activity" evidence=ISS] [GO:0005047 "signal recognition
particle binding" evidence=ISS] [GO:0009306 "protein secretion"
evidence=ISS] HAMAP:MF_00920 InterPro:IPR000897 InterPro:IPR003593
InterPro:IPR004390 InterPro:IPR013822 Pfam:PF00448 Pfam:PF02881
PROSITE:PS00300 SMART:SM00382 SMART:SM00962 SMART:SM00963
GO:GO:0005525 GO:GO:0005737 GO:GO:0003924 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0031226 HOGENOM:HOG000036278
KO:K03110 GO:GO:0006614 SUPFAM:SSF47364 TIGRFAMs:TIGR00064
HSSP:P10121 RefSeq:NP_720102.1 ProteinModelPortal:Q8E8S5 SMR:Q8E8S5
GeneID:1172171 KEGG:son:SO_4586 PATRIC:23528839 OMA:PDNANGP
Uniprot:Q8E8S5
Length = 510
Score = 172 (65.6 bits), Expect = 8.8e-10, P = 8.8e-10
Identities = 50/161 (31%), Positives = 79/161 (49%)
Query: 353 EEIAEKLC-ESVAASLEGKKLASFTRISSIVQAAMEEALVRILTP--RRSIDILRDVHAA 409
EE+ E+L V G+ + S T +S Q EAL +L ++++D +
Sbjct: 238 EELEEQLLIADVGVETTGRLIKSLTEHASRKQLKDAEALYDLLRDEMQKTLDPVAIPLVP 297
Query: 410 KEQRKPYXXXXXXXXXXXKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRL 469
+ P+ K+T + K+A + SVM+AA DTFR+ AVEQL+ +R
Sbjct: 298 ENANGPFVILMVGVNGVGKTTTIGKLAKQYQRQGKSVMLAAGDTFRAAAVEQLQVWGQRN 357
Query: 470 QVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQ 510
+P+ + D A V +A+Q A DV++ DTAGR+Q
Sbjct: 358 NIPVVAQHTGADSASVLFDALQAAKARKIDVLIADTAGRLQ 398
>POMBASE|SPCC188.06c [details] [associations]
symbol:srp54 "signal recognition particle subunit Srp54"
species:4896 "Schizosaccharomyces pombe" [GO:0003924 "GTPase
activity" evidence=IMP] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=IDA] [GO:0005786
"signal recognition particle, endoplasmic reticulum targeting"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006614
"SRP-dependent cotranslational protein targeting to membrane"
evidence=IMP] [GO:0008312 "7S RNA binding" evidence=IMP]
InterPro:IPR000897 InterPro:IPR003593 InterPro:IPR004125
InterPro:IPR006325 InterPro:IPR013822 InterPro:IPR022941
Pfam:PF00448 Pfam:PF02881 Pfam:PF02978 PROSITE:PS00300
SMART:SM00382 SMART:SM00962 SMART:SM00963 PomBase:SPCC188.06c
GO:GO:0005525 GO:GO:0005783 GO:GO:0005829 EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0003924 GO:GO:0008312 GO:GO:0006614
SUPFAM:SSF47364 GO:GO:0005786 eggNOG:COG0541 HOGENOM:HOG000036165
KO:K03106 Gene3D:1.10.260.30 SUPFAM:SSF47446 TIGRFAMs:TIGR01425
OMA:GQQVVKI EMBL:X51613 EMBL:M55518 PIR:A33644 RefSeq:NP_588209.1
ProteinModelPortal:P21565 MINT:MINT-4687605 STRING:P21565
PRIDE:P21565 EnsemblFungi:SPCC188.06c.1 GeneID:2539290
KEGG:spo:SPCC188.06c OrthoDB:EOG4TMV9N NextBio:20800457
Uniprot:P21565
Length = 522
Score = 172 (65.6 bits), Expect = 9.2e-10, P = 9.2e-10
Identities = 49/188 (26%), Positives = 89/188 (47%)
Query: 335 LEPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLASFTRISSIVQAAMEEALVRIL 394
++ LK + L+ +V + ++L ++ + L IVQ A+ + L ++
Sbjct: 28 VDTLLKNICTALLETDVNVRLVQELRSNIKKKINVSTLPQGINGKRIVQKAVFDELCSLV 87
Query: 395 TPRRSIDILRDVHAAKEQRKPYXXXXXXXXXXXKSTNLAKVAYWLLQHKVSVMMAACDTF 454
P+ D K+ R P K+T +K+A + + + A DTF
Sbjct: 88 DPKV------DAFTPKKGR-PSVIMMVGLQGSGKTTTCSKLALHYQRRGLKSCLVAADTF 140
Query: 455 RSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQVIIE 514
R+GA +QL+ +A + +VP F E DP ++AKE + + + DV++VDT+GR Q E
Sbjct: 141 RAGAFDQLKQNAIKARVPYFGSYTETDPVVIAKEGVDKFKNDRFDVIIVDTSGRHQQEQE 200
Query: 515 YYLFLLHI 522
+ ++ I
Sbjct: 201 LFAEMVEI 208
>UNIPROTKB|Q97QD2 [details] [associations]
symbol:ffh "Signal recognition particle protein"
species:170187 "Streptococcus pneumoniae TIGR4" [GO:0005515
"protein binding" evidence=IPI] HAMAP:MF_00306 InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR004125 InterPro:IPR004780
InterPro:IPR013822 InterPro:IPR022941 Pfam:PF00448 Pfam:PF02881
Pfam:PF02978 PROSITE:PS00300 SMART:SM00382 SMART:SM00962
SMART:SM00963 GO:GO:0005525 GO:GO:0003924 GO:GO:0006184
EMBL:AE005672 GenomeReviews:AE005672_GR GO:GO:0008312 GO:GO:0006614
SUPFAM:SSF47364 GO:GO:0005786 KO:K03106 Gene3D:1.10.260.30
SUPFAM:SSF47446 HOGENOM:HOG000036164 PANTHER:PTHR11564:SF7
TIGRFAMs:TIGR00959 OMA:GQQVVKI ProtClustDB:PRK10867 HSSP:O07347
PIR:F95149 RefSeq:NP_345751.1 ProteinModelPortal:Q97QD2
EnsemblBacteria:EBSTRT00000025249 GeneID:931801 KEGG:spn:SP_1287
PATRIC:19706973 Uniprot:Q97QD2
Length = 523
Score = 172 (65.6 bits), Expect = 9.3e-10, P = 9.3e-10
Identities = 47/195 (24%), Positives = 99/195 (50%)
Query: 319 SMFQSIAGKANLDKADLEPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLASFTRI 378
++F+++ K + ++D++ A K ++ L+ +VA + + + V G ++
Sbjct: 12 NVFKNLRKKGKISESDVQEATKEIRLALLEADVALPVVKDFIKKVRERAVGHEVIDTLNP 71
Query: 379 SSIVQAAMEEALVRILTPRRSIDILRDVHAAKEQRKPYXXXXXXXXXXXKSTNLAKVAYW 438
+ + ++E L +L + +I+ K + P K+T K+A
Sbjct: 72 AQQIIKIVDEELTAVLGSDTA-EII------KSPKIPTIIMMVGLQGAGKTTFAGKLANK 124
Query: 439 LLQHK-VSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAI-VAKEAIQEATRN 496
L + + +M A D +R A++QL+T +++ VP+F G E PA+ + ++ +++A N
Sbjct: 125 LKKEENARPLMIAADIYRPAAIDQLKTLGQQIDVPVFALGTEV-PAVEIVRQGLEQAQTN 183
Query: 497 GSDVVLVDTAGRMQV 511
+D VL+DTAGR+Q+
Sbjct: 184 HNDYVLIDTAGRLQI 198
>UNIPROTKB|P66842 [details] [associations]
symbol:ftsY "Signal recognition particle receptor FtsY"
species:1773 "Mycobacterium tuberculosis" [GO:0005618 "cell wall"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
HAMAP:MF_00920 InterPro:IPR000897 InterPro:IPR003593
InterPro:IPR004390 InterPro:IPR013822 Pfam:PF00448 Pfam:PF02881
PROSITE:PS00300 SMART:SM00382 SMART:SM00962 SMART:SM00963
GO:GO:0005525 GO:GO:0005886 GO:GO:0005737 GO:GO:0005618
EMBL:AE000516 GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
GO:GO:0006184 EMBL:BX842581 GO:GO:0017111 eggNOG:COG0552
HOGENOM:HOG000036278 KO:K03110 ProtClustDB:PRK10416 GO:GO:0006614
SUPFAM:SSF47364 TIGRFAMs:TIGR00064 PIR:A70748 RefSeq:NP_217437.1
RefSeq:NP_337502.1 RefSeq:YP_006516374.1 ProteinModelPortal:P66842
SMR:P66842 TCDB:3.A.5.2.2 PhosSite:P12071727 PRIDE:P66842
EnsemblBacteria:EBMYCT00000000121 EnsemblBacteria:EBMYCT00000072194
GeneID:13317714 GeneID:887205 GeneID:925285 KEGG:mtc:MT2989
KEGG:mtu:Rv2921c KEGG:mtv:RVBD_2921c PATRIC:18128342
TubercuList:Rv2921c OMA:FIGIGEN Uniprot:P66842
Length = 422
Score = 170 (64.9 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 52/177 (29%), Positives = 86/177 (48%)
Query: 334 DL-EPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLASFTRISSIVQAAMEEALVR 392
DL E + + ++D L+ VA+ + SV + L + + R + +A + + L+
Sbjct: 149 DLDEDSWQDVEDTLL---VAD-LGPAATASVVSQLRSRLASGNVRTEADARAVLRDVLIN 204
Query: 393 ILTPRRSIDILRDVHAAKEQRKPYXXXXXXXXXXXKSTNLAKVAYWLLQHKVSVMMAACD 452
L P +D R + A P K+T + K+A L+ V++ A D
Sbjct: 205 ELQP--GMD--RSIRALPHAGHPSVLLVVGVNGTGKTTTVGKLARVLVADGRRVVLGAAD 260
Query: 453 TFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRM 509
TFR+ A +QL+T A R+ + DPA VA +A+ + G+DVVL+DTAGR+
Sbjct: 261 TFRAAAADQLQTWAARVGAAVVRGPEGADPASVAFDAVDKGIAAGADVVLIDTAGRL 317
>NCBI_NP|NP_355632.2 [details] [associations]
symbol:ffh "signal recognition particle protein"
species:176299 "Agrobacterium fabrum str. C58" [GO:0009306 "protein
secretion" evidence=ISS] REFSEQ:NC_003062 Ncbi:NP_355632
Length = 523
Score = 171 (65.3 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 55/194 (28%), Positives = 86/194 (44%)
Query: 319 SMFQSIAGKANLDKADLEPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLASFTRI 378
S+ + G+ L +AD+ AL+ ++ L+ +VA E+ + V G + +
Sbjct: 11 SILNGLTGRGALTEADVAAALREVRRALLEADVALEVVRSFTDRVREKAVGAAVLKSIKP 70
Query: 379 SSIVQAAMEEALVRILTPRRSIDILRDVHAAKEQRKPYXXXXXXXXXXXKSTNLAKVAYW 438
+V + + LV +L + I D+HAA P K+T K+A
Sbjct: 71 GQMVVKIVHDELVEMLGTE-GVSI--DLHAAA----PVVIMMVGLQGSGKTTTTGKIAKR 123
Query: 439 LLQH-KVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNG 497
L K V+MA+ DT R A EQLR + V + P +A A+Q A G
Sbjct: 124 LTDRDKKKVLMASLDTRRPAAQEQLRQLGVQTGVDTLPIIAGQSPTDIAARAVQAAKLGG 183
Query: 498 SDVVLVDTAGRMQV 511
DVV++DTAGR +
Sbjct: 184 HDVVILDTAGRTHI 197
>TIGR_CMR|CJE_0809 [details] [associations]
symbol:CJE_0809 "signal recognition particle protein"
species:195099 "Campylobacter jejuni RM1221" [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0005048 "signal sequence binding"
evidence=ISS] [GO:0009306 "protein secretion" evidence=ISS]
[GO:0048501 "signal recognition particle, plasma membrane
targeting" evidence=ISS] InterPro:IPR000897 InterPro:IPR003593
InterPro:IPR004125 InterPro:IPR004780 InterPro:IPR013822
Pfam:PF00448 Pfam:PF02881 Pfam:PF02978 PROSITE:PS00300
SMART:SM00382 SMART:SM00962 SMART:SM00963 GO:GO:0005525
GO:GO:0003924 GO:GO:0006184 EMBL:CP000025 GenomeReviews:CP000025_GR
GO:GO:0008312 GO:GO:0006614 SUPFAM:SSF47364 eggNOG:COG0541
KO:K03106 Gene3D:1.10.260.30 SUPFAM:SSF47446 HOGENOM:HOG000036164
OMA:DSGKTEQ PANTHER:PTHR11564:SF7 TIGRFAMs:TIGR00959
ProtClustDB:PRK10867 GO:GO:0048500 RefSeq:YP_178813.1
ProteinModelPortal:Q5HV72 STRING:Q5HV72 GeneID:3230759
KEGG:cjr:CJE0809 PATRIC:20043363 BioCyc:CJEJ195099:GJC0-824-MONOMER
Uniprot:Q5HV72
Length = 445
Score = 168 (64.2 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 57/196 (29%), Positives = 95/196 (48%)
Query: 318 SSMFQSIAGKANL--DKADLEPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLASF 375
S F+S K D+ L+ AL+ LK L+ +V ++ ++L + ++ +
Sbjct: 6 SESFKSAINKLRFVDDEKALKNALETLKKALLKADVHHKVTKELLTLIEEDVKQNGIGQK 65
Query: 376 TRISSIVQAAMEEALVRILTPRRSIDILRDVHAAKEQRKPYXXXXXXXXXXXKSTNLAKV 435
+++I + +E L + + V A+K P K+T+ K+
Sbjct: 66 QFLNAI-KVNLENIL-SVNGKNQGF-----VFASKP---PTVVLMAGLQGGGKTTSTIKL 115
Query: 436 AYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATR 495
A +L V++AACD R AVEQLR ++ +F EKDP VAKEA+++A
Sbjct: 116 ANYLKLRNKKVLVAACDLQRLAAVEQLRQLCEANEIELFFIENEKDPIRVAKEALKKAES 175
Query: 496 NGSDVVLVDTAGRMQV 511
+ DV+LVDTAGR+ +
Sbjct: 176 SMVDVLLVDTAGRLAI 191
>UNIPROTKB|O07347 [details] [associations]
symbol:ffh "Signal recognition particle protein"
species:271 "Thermus aquaticus" [GO:0005515 "protein binding"
evidence=IPI] HAMAP:MF_00306 InterPro:IPR000897 InterPro:IPR003593
InterPro:IPR004125 InterPro:IPR004780 InterPro:IPR013822
InterPro:IPR022941 Pfam:PF00448 Pfam:PF02881 Pfam:PF02978
PROSITE:PS00300 SMART:SM00382 SMART:SM00962 SMART:SM00963
GO:GO:0005525 GO:GO:0003924 GO:GO:0006184 GO:GO:0008312
GO:GO:0006614 SUPFAM:SSF47364 PDB:1OKK PDB:1RJ9 PDB:2CNW PDB:2J7P
PDB:2XKV PDBsum:1OKK PDBsum:1RJ9 PDBsum:2CNW PDBsum:2J7P
PDBsum:2XKV PDB:1RY1 PDBsum:1RY1 GO:GO:0005786 Gene3D:1.10.260.30
SUPFAM:SSF47446 PANTHER:PTHR11564:SF7 TIGRFAMs:TIGR00959
EMBL:U82109 PDB:1FFH PDB:1JPJ PDB:1JPN PDB:1LS1 PDB:1NG1 PDB:1O87
PDB:2C03 PDB:2C04 PDB:2FFH PDB:2IY3 PDB:2J45 PDB:2J46 PDB:2NG1
PDB:3NG1 PDBsum:1FFH PDBsum:1JPJ PDBsum:1JPN PDBsum:1LS1
PDBsum:1NG1 PDBsum:1O87 PDBsum:2C03 PDBsum:2C04 PDBsum:2FFH
PDBsum:2IY3 PDBsum:2J45 PDBsum:2J46 PDBsum:2NG1 PDBsum:3NG1
ProteinModelPortal:O07347 SMR:O07347 IntAct:O07347
EvolutionaryTrace:O07347 Uniprot:O07347
Length = 430
Score = 166 (63.5 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 49/188 (26%), Positives = 86/188 (45%)
Query: 324 IAGKANLDKADLEPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLASFTRISSIVQ 383
+ G+ + + DL+ L+ ++ LM +V E+A E V GK++ + ++
Sbjct: 16 LRGRGRITEEDLKATLREIRRALMDADVNLEVARDFVERVREEALGKQVLESLTPAEVIL 75
Query: 384 AAMEEALVRILTPRRSIDILRDVHAAKEQRKPYXXXXXXXXXXXKSTNLAKVAYWLLQHK 443
A + EAL L + +L+D R + K+T AK+A +
Sbjct: 76 ATVYEALKEALGGEARLPVLKD-------RNLWFLVGLQGSG--KTTTAAKLALYYKGKG 126
Query: 444 VSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLV 503
++ A DT R A EQLR ++ VP+ E + P + + ++A D++LV
Sbjct: 127 RRPLLVAADTQRPAAREQLRLLGEKVGVPVLEVMDGESPESIRRRVEEKARLEARDLILV 186
Query: 504 DTAGRMQV 511
DTAGR+Q+
Sbjct: 187 DTAGRLQI 194
>TIGR_CMR|SO_1356 [details] [associations]
symbol:SO_1356 "signal recognition particle protein Ffh"
species:211586 "Shewanella oneidensis MR-1" [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0005048 "signal sequence binding"
evidence=ISS] [GO:0009306 "protein secretion" evidence=ISS]
[GO:0048501 "signal recognition particle, plasma membrane
targeting" evidence=ISS] HAMAP:MF_00306 InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR004125 InterPro:IPR004780
InterPro:IPR013822 InterPro:IPR022941 Pfam:PF00448 Pfam:PF02881
Pfam:PF02978 PROSITE:PS00300 SMART:SM00382 SMART:SM00962
SMART:SM00963 GO:GO:0005525 GO:GO:0003924 GO:GO:0006184
EMBL:AE014299 GenomeReviews:AE014299_GR InterPro:IPR001251
PROSITE:PS50191 GO:GO:0008312 GO:GO:0006614 SUPFAM:SSF47364
GO:GO:0005786 KO:K03106 Gene3D:1.10.260.30 SUPFAM:SSF47446
HOGENOM:HOG000036164 PANTHER:PTHR11564:SF7 TIGRFAMs:TIGR00959
OMA:GQQVVKI ProtClustDB:PRK10867 HSSP:O07347 RefSeq:NP_716976.1
ProteinModelPortal:Q8EH73 GeneID:1169177 KEGG:son:SO_1356
PATRIC:23522366 Uniprot:Q8EH73
Length = 457
Score = 166 (63.5 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 49/200 (24%), Positives = 95/200 (47%)
Query: 314 TGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLA 373
T S ++I+G+ L + +++ L+ ++ L+ +VA + + +V G+++A
Sbjct: 6 TDRLSRTLKNISGRGRLTEENVKETLREVRMALLEADVALPVVREFVNNVKERAVGQEVA 65
Query: 374 -SFTRISSIVQAAMEEALVRILTPRRSIDILRDVHAAKEQRKPYXXXXXXXXXXXKSTNL 432
S + + ++ E + +++D+ + P K+T++
Sbjct: 66 KSLSPGQAFIKIVQSELEKSMGEANQALDLAT--------QPPAVVMMAGLQGAGKTTSV 117
Query: 433 AKVAYWL-LQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQ 491
AK+ L +HK SV++ + D +R A++QL T A + V F + P +AK AI
Sbjct: 118 AKLGKLLRTRHKKSVLVVSADVYRPAAIKQLETLATEVDVEFFPSDVSQKPIDIAKAAIA 177
Query: 492 EATRNGSDVVLVDTAGRMQV 511
A DVV++DTAGR+ V
Sbjct: 178 HAKLKFIDVVILDTAGRLHV 197
>DICTYBASE|DDB_G0275455 [details] [associations]
symbol:srp54 "signal recognition particle 54 kDa
subunit" species:44689 "Dictyostelium discoideum" [GO:0045335
"phagocytic vesicle" evidence=IDA] [GO:0048500 "signal recognition
particle" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0008312 "7S RNA binding" evidence=IEA]
[GO:0006614 "SRP-dependent cotranslational protein targeting to
membrane" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0003924
"GTPase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0005786 "signal recognition particle, endoplasmic reticulum
targeting" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR004125 InterPro:IPR006325
InterPro:IPR013822 InterPro:IPR022941 Pfam:PF00448 Pfam:PF02881
Pfam:PF02978 PROSITE:PS00300 SMART:SM00382 SMART:SM00962
SMART:SM00963 dictyBase:DDB_G0275455 GO:GO:0005525 GO:GO:0045335
GO:GO:0003924 GO:GO:0006184 GenomeReviews:CM000151_GR
EMBL:AAFI02000013 GO:GO:0008312 GO:GO:0006614 SUPFAM:SSF47364
GO:GO:0005786 eggNOG:COG0541 KO:K03106 Gene3D:1.10.260.30
SUPFAM:SSF47446 TIGRFAMs:TIGR01425 OMA:GQQVVKI RefSeq:XP_643640.1
HSSP:P61011 ProteinModelPortal:Q75K18 STRING:Q75K18
EnsemblProtists:DDB0232373 GeneID:8620227 KEGG:ddi:DDB_G0275455
Uniprot:Q75K18
Length = 542
Score = 167 (63.8 bits), Expect = 3.5e-09, P = 3.5e-09
Identities = 41/191 (21%), Positives = 97/191 (50%)
Query: 318 SSMFQSIAGKANLDKADLEPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLASFTR 377
SS +S+ +++ + LK + + L +V+ + ++ +++ ++ ++A+
Sbjct: 11 SSALRSLNETTIVNEDTINQLLKEVGNALSKSDVSMSLIIQMRKNIKDKIKLDQMAAGLN 70
Query: 378 ISSIVQAAMEEALVRILTPRRSIDILRDVHAAKEQRKPYXXXXXXXXXXXKSTNLAKVAY 437
I++ + + L+R+L P + + + K K+T++ K+AY
Sbjct: 71 KRKIIKQVVFDELIRLLDP--GVPLWKPTKG-----KSNIVMFVGLQGAGKTTSVTKLAY 123
Query: 438 WLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNG 497
+ + S + DTFR+GA +Q+R +A + ++ + EKDP +VA+ + ++G
Sbjct: 124 FYKKKGFSTAIVCADTFRAGAFDQVRHNAAKAKIHYYGSETEKDPVVVARTGVDIFKKDG 183
Query: 498 SDVVLVDTAGR 508
+++++VDT+GR
Sbjct: 184 TEIIIVDTSGR 194
>TAIR|locus:2037803 [details] [associations]
symbol:ATHSRP54A "signal recognition particle 54 kDa
subunit" species:3702 "Arabidopsis thaliana" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003729 "mRNA binding"
evidence=ISS] [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0005737 "cytoplasm" evidence=ISM;ISS] [GO:0005786 "signal
recognition particle, endoplasmic reticulum targeting"
evidence=ISS] [GO:0006614 "SRP-dependent cotranslational protein
targeting to membrane" evidence=IEA] [GO:0006617 "SRP-dependent
cotranslational protein targeting to membrane, signal sequence
recognition" evidence=ISS] [GO:0008312 "7S RNA binding"
evidence=IEA;ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0048500 "signal recognition particle"
evidence=IEA] [GO:0010267 "production of ta-siRNAs involved in RNA
interference" evidence=RCA] [GO:0035196 "production of miRNAs
involved in gene silencing by miRNA" evidence=RCA] [GO:0051607
"defense response to virus" evidence=RCA] InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR004125 InterPro:IPR006325
InterPro:IPR013822 InterPro:IPR022941 Pfam:PF00448 Pfam:PF02881
Pfam:PF02978 PROSITE:PS00300 SMART:SM00382 SMART:SM00962
SMART:SM00963 GO:GO:0005525 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0003924 GO:GO:0006184 EMBL:AC007591 GO:GO:0008312
GO:GO:0006614 SUPFAM:SSF47364 GO:GO:0005786 EMBL:L19997
EMBL:AF344329 EMBL:AY086187 IPI:IPI00526094 PIR:S42550
RefSeq:NP_563970.1 UniGene:At.24597 ProteinModelPortal:P37106
SMR:P37106 DIP:DIP-59002N STRING:P37106 PaxDb:P37106 PRIDE:P37106
EnsemblPlants:AT1G15310.1 GeneID:838100 KEGG:ath:AT1G15310
TAIR:At1g15310 eggNOG:COG0541 HOGENOM:HOG000036165
InParanoid:P37106 KO:K03106 OMA:KVIPPQM PhylomeDB:P37106
ProtClustDB:CLSN2686827 Genevestigator:P37106 GermOnline:AT1G15310
Gene3D:1.10.260.30 SUPFAM:SSF47446 TIGRFAMs:TIGR01425
Uniprot:P37106
Length = 479
Score = 165 (63.1 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 47/198 (23%), Positives = 89/198 (44%)
Query: 311 AKKTGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVAEEIAEKLCESVAASLEGK 370
A+ G + Q + +D+ L L + L+ +V+ + EK+ ++ +
Sbjct: 4 AELGGRITRAIQQMNNVTIIDEKVLNDFLNEITRALLQSDVSFGLVEKMQTNIKKIVNLD 63
Query: 371 KLASFTRISSIVQAAMEEALVRILTPRRSIDILRDVHAAKEQRKPYXXXXXXXXXXXKST 430
LA+ I++ A+ + L R+L P + A ++ KP K+T
Sbjct: 64 DLAAGHNKRLIIEQAIFKELCRMLDPGKPA-------FAPKKAKPSVVMFVGLQGAGKTT 116
Query: 431 NLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAI 490
K AY+ + + DTFR+GA +QL+ +A + ++P + E DP +A E +
Sbjct: 117 TCTKYAYYHQKKGYKAALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVKIAVEGV 176
Query: 491 QEATRNGSDVVLVDTAGR 508
+ D+++VDT+GR
Sbjct: 177 DRFKKEKCDLIIVDTSGR 194
>SGD|S000006292 [details] [associations]
symbol:SRP54 "Signal recognition particle (SRP) subunit
(homolog of mammalian SRP54)" species:4932 "Saccharomyces
cerevisiae" [GO:0008312 "7S RNA binding" evidence=IEA;IDA]
[GO:0006614 "SRP-dependent cotranslational protein targeting to
membrane" evidence=IEA;IMP] [GO:0006617 "SRP-dependent
cotranslational protein targeting to membrane, signal sequence
recognition" evidence=IC;ISA] [GO:0005525 "GTP binding"
evidence=IEA;ISA] [GO:0006184 "GTP catabolic process" evidence=IEA]
[GO:0005048 "signal sequence binding" evidence=IPI] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005096 "GTPase activator activity"
evidence=IEA] [GO:0048500 "signal recognition particle"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0045047
"protein targeting to ER" evidence=IPI] [GO:0005786 "signal
recognition particle, endoplasmic reticulum targeting"
evidence=IEA;IDA] [GO:0043547 "positive regulation of GTPase
activity" evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
InterPro:IPR000897 InterPro:IPR003593 InterPro:IPR004125
InterPro:IPR006325 InterPro:IPR013822 InterPro:IPR022941
Pfam:PF00448 Pfam:PF02881 Pfam:PF02978 PROSITE:PS00300
SMART:SM00382 SMART:SM00962 SMART:SM00963 SGD:S000006292
GO:GO:0005525 GO:GO:0005096 GO:GO:0043547 GO:GO:0003924
GO:GO:0006184 EMBL:BK006949 EMBL:U51033 GO:GO:0005048 GO:GO:0008312
SUPFAM:SSF47364 GO:GO:0005786 GO:GO:0006617 eggNOG:COG0541
HOGENOM:HOG000036165 KO:K03106 Gene3D:1.10.260.30 SUPFAM:SSF47446
TIGRFAMs:TIGR01425 GeneTree:ENSGT00550000074824 OrthoDB:EOG4TMV9N
EMBL:X16908 EMBL:M55517 EMBL:X51614 PIR:S69073 RefSeq:NP_015413.1
ProteinModelPortal:P20424 SMR:P20424 DIP:DIP-2943N IntAct:P20424
MINT:MINT-484768 STRING:P20424 PaxDb:P20424 PeptideAtlas:P20424
EnsemblFungi:YPR088C GeneID:856203 KEGG:sce:YPR088C CYGD:YPR088c
OMA:TAGRHKE NextBio:981405 Genevestigator:P20424 GermOnline:YPR088C
Uniprot:P20424
Length = 541
Score = 164 (62.8 bits), Expect = 7.5e-09, P = 7.5e-09
Identities = 46/174 (26%), Positives = 85/174 (48%)
Query: 339 LKALKDRLMTKNVAEEIAEKLCESVAASL--EGKKLASFTRISS--IVQAAMEEALVRIL 394
LK + L+ +V + KL ++ + L E + S T + ++Q + + L +++
Sbjct: 33 LKGIVTALLESDVNIALVSKLRNNIRSQLLSENRSEKSTTNAQTKKLIQKTVFDELCKLV 92
Query: 395 TPRRSIDILRDVHAAKEQRKPYXXXXXXXXXXXKSTNLAKVAYWLLQHKVSVMMAACDTF 454
T S + ++RK K+T+ K+A + + V + DTF
Sbjct: 93 TCEGS----EEKAFVPKKRKTNIIMFVGLQGSGKTTSCTKLAVYYSKRGFKVGLVCADTF 148
Query: 455 RSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGR 508
R+GA +QL+ +A R ++P + E DPA VA+E I + + D+++VDT+GR
Sbjct: 149 RAGAFDQLKQNAIRARIPFYGSYTETDPAKVAEEGINKFKKEKFDIIIVDTSGR 202
>FB|FBgn0010747 [details] [associations]
symbol:Srp54k "Signal recognition particle protein 54k"
species:7227 "Drosophila melanogaster" [GO:0005786 "signal
recognition particle, endoplasmic reticulum targeting"
evidence=ISS] [GO:0006614 "SRP-dependent cotranslational protein
targeting to membrane" evidence=ISS] [GO:0008312 "7S RNA binding"
evidence=ISS] [GO:0006617 "SRP-dependent cotranslational protein
targeting to membrane, signal sequence recognition" evidence=ISS]
[GO:0005048 "signal sequence binding" evidence=ISS] [GO:0005525
"GTP binding" evidence=IEA] [GO:0003924 "GTPase activity"
evidence=IEA] HAMAP:MF_00306 InterPro:IPR000897 InterPro:IPR003593
InterPro:IPR004125 InterPro:IPR006325 InterPro:IPR013822
InterPro:IPR022941 Pfam:PF00448 Pfam:PF02881 Pfam:PF02978
PROSITE:PS00300 SMART:SM00382 SMART:SM00962 SMART:SM00963
GO:GO:0005525 GO:GO:0003924 GO:GO:0006184 GO:GO:0005048
GO:GO:0008312 SUPFAM:SSF47364 GO:GO:0005786 GO:GO:0006617
eggNOG:COG0541 Gene3D:1.10.260.30 SUPFAM:SSF47446
TIGRFAMs:TIGR01425 HSSP:P70722 EMBL:AY094660
ProteinModelPortal:Q8T3P8 SMR:Q8T3P8 STRING:Q8T3P8 PaxDb:Q8T3P8
PRIDE:Q8T3P8 FlyBase:FBgn0010747 InParanoid:Q8T3P8
OrthoDB:EOG44TMQ3 ChiTaRS:Srp54k ArrayExpress:Q8T3P8 Bgee:Q8T3P8
Uniprot:Q8T3P8
Length = 569
Score = 164 (62.8 bits), Expect = 8.2e-09, P = 8.2e-09
Identities = 43/191 (22%), Positives = 94/191 (49%)
Query: 318 SSMFQSIAGKANLDKADLEPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLASFTR 377
++ S++ +++ L LK + L+ +V + ++L E+V A ++ ++A
Sbjct: 11 TTALHSLSKATVINEEALNSMLKEICAALLEADVNIRLVKQLRENVRAVIDFDEMAGGLN 70
Query: 378 ISSIVQAAMEEALVRILTPRRSIDILRDVHAAKEQRKPYXXXXXXXXXXXKSTNLAKVAY 437
++Q+A+ + LV+++ P ++ K K K+T K+AY
Sbjct: 71 KRRMIQSAVFKELVKLVDPG-----VKPYQPIKG--KANVVMFVGLQGSGKTTTCTKLAY 123
Query: 438 WLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNG 497
+ + DTFR+GA +Q++ +A + ++P + E DP ++A++ + R G
Sbjct: 124 HYQKRNWKSCLVCADTFRAGAYDQVKQNATKARIPFYGSYTEIDPVVIAQDGVDMFKREG 183
Query: 498 SDVVLVDTAGR 508
++++VDT+GR
Sbjct: 184 FEMIIVDTSGR 194
>TIGR_CMR|CPS_0157 [details] [associations]
symbol:CPS_0157 "signal recognition particle-docking
protein FtsY" species:167879 "Colwellia psychrerythraea 34H"
[GO:0000910 "cytokinesis" evidence=ISS] [GO:0003924 "GTPase
activity" evidence=ISS] HAMAP:MF_00920 InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR004390 InterPro:IPR013822
Pfam:PF00448 Pfam:PF02881 PROSITE:PS00300 SMART:SM00382
SMART:SM00962 SMART:SM00963 GO:GO:0005525 GO:GO:0005737
GO:GO:0003924 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0031226
eggNOG:COG0552 HOGENOM:HOG000036278 KO:K03110 GO:GO:0006614
SUPFAM:SSF47364 TIGRFAMs:TIGR00064 RefSeq:YP_266925.1
ProteinModelPortal:Q48AI8 SMR:Q48AI8 STRING:Q48AI8 GeneID:3519649
KEGG:cps:CPS_0157 PATRIC:21463731 OMA:VEAVAIQ
BioCyc:CPSY167879:GI48-260-MONOMER Uniprot:Q48AI8
Length = 481
Score = 161 (61.7 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 46/169 (27%), Positives = 77/169 (45%)
Query: 342 LKDRLMTKNVAEEIAEKLCESVAASLEGKKLASFTRISSIVQAAMEEALVRILTPRRSID 401
L+ L+ +V E K+ ES+ S K+L + + +++ +++ + + P
Sbjct: 216 LETHLLLADVGVETTMKIIESLTQSANRKQLKDASALYDLLKIELKKVIEDVSQPL---- 271
Query: 402 ILRDVHAAKEQRKPYXXXXXXXXXXXKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQ 461
E P+ K+T + K+A SVM+AA DTFR+ AVEQ
Sbjct: 272 ------VIPEDDGPFVILMVGVNGVGKTTTIGKLAKQFQAQGKSVMLAAGDTFRAAAVEQ 325
Query: 462 LRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQ 510
L+ R +P+ + D A V +AI A D+++ DTAGR+Q
Sbjct: 326 LQVWGERNNIPVIAQHTGADSASVIFDAISAAKARKVDIIIADTAGRLQ 374
>UNIPROTKB|P83749 [details] [associations]
symbol:ftsY "Signal recognition particle receptor FtsY"
species:271 "Thermus aquaticus" [GO:0005515 "protein binding"
evidence=IPI] HAMAP:MF_00920 InterPro:IPR000897 InterPro:IPR003593
InterPro:IPR004390 InterPro:IPR013822 Pfam:PF00448 Pfam:PF02881
PROSITE:PS00300 SMART:SM00382 SMART:SM00962 SMART:SM00963
GO:GO:0005525 GO:GO:0005886 GO:GO:0005737 GO:GO:0006184
GO:GO:0017111 GO:GO:0006614 SUPFAM:SSF47364 TIGRFAMs:TIGR00064
EMBL:AY484668 PDB:1OKK PDB:1RJ9 PDB:2CNW PDB:2IYL PDB:2J7P PDB:2Q9A
PDB:2Q9B PDB:2Q9C PDB:2XKV PDBsum:1OKK PDBsum:1RJ9 PDBsum:2CNW
PDBsum:2IYL PDBsum:2J7P PDBsum:2Q9A PDBsum:2Q9B PDBsum:2Q9C
PDBsum:2XKV ProteinModelPortal:P83749 SMR:P83749 IntAct:P83749
EvolutionaryTrace:P83749 Uniprot:P83749
Length = 304
Score = 156 (60.0 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 52/181 (28%), Positives = 84/181 (46%)
Query: 334 DLEPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLASFTRISSIVQAAMEEALVRI 393
+LE L+ L+ L+ +V E++ + V AS G+K ++ A++E LV +
Sbjct: 27 NLEEVLEELEMALLAADVGLSATEEILQEVRAS--GRK---------DLKEAVKEKLVGM 75
Query: 394 LTPRRSIDILRDVHAAKEQRKPYX-----XXXXXXXXXXKSTNLAKVAYWLLQHKVSVMM 448
L P LR + ++ KP K+T +AK+ + VM
Sbjct: 76 LEPDERRATLRKLGFNPQKPKPVEPKGRVVLVVGVNGVGKTTTIAKLGRYYQNLGKKVMF 135
Query: 449 AACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGR 508
A DTFR+ QL +RL +P+ + DPA +A +A+Q G D++ VDTAGR
Sbjct: 136 CAGDTFRAAGGTQLSEWGKRLSIPVIQGPEGTDPAALAYDAVQAMKARGYDLLFVDTAGR 195
Query: 509 M 509
+
Sbjct: 196 L 196
>WB|WBGene00009012 [details] [associations]
symbol:F21D5.7 species:6239 "Caenorhabditis elegans"
[GO:0005525 "GTP binding" evidence=IEA] [GO:0006614 "SRP-dependent
cotranslational protein targeting to membrane" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0008312 "7S
RNA binding" evidence=IEA] [GO:0048500 "signal recognition
particle" evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0006915 "apoptotic process"
evidence=IMP] HAMAP:MF_00306 InterPro:IPR000897 InterPro:IPR003593
InterPro:IPR004125 InterPro:IPR006325 InterPro:IPR013822
InterPro:IPR022941 Pfam:PF00448 Pfam:PF02881 Pfam:PF02978
PROSITE:PS00300 SMART:SM00382 SMART:SM00962 SMART:SM00963
GO:GO:0005525 GO:GO:0006915 GO:GO:0002119 GO:GO:0003924
GO:GO:0006184 GO:GO:0000003 GO:GO:0008312 GO:GO:0006614
SUPFAM:SSF47364 EMBL:Z68161 KO:K03106 Gene3D:1.10.260.30
SUPFAM:SSF47446 TIGRFAMs:TIGR01425 GeneTree:ENSGT00550000074824
OMA:GQQVVKI GO:GO:0048500 EMBL:Z54271 PIR:A88763 PIR:T21140
RefSeq:NP_501507.1 HSSP:P70722 ProteinModelPortal:G5EE80 SMR:G5EE80
EnsemblMetazoa:F21D5.7.1 EnsemblMetazoa:F21D5.7.2 GeneID:259584
KEGG:cel:CELE_F21D5.7 CTD:259584 WormBase:F21D5.7 NextBio:952170
Uniprot:G5EE80
Length = 496
Score = 159 (61.0 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 39/179 (21%), Positives = 89/179 (49%)
Query: 330 LDKADLEPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLASFTRISSIVQAAMEEA 389
+++ +L+ LK + L+ +V + ++L ++V ++ +++ +Q +
Sbjct: 23 INEGELDLMLKEVCTALIESDVHIRLVKQLKDNVKKAINFEEIVGGANKRRYIQKTVFNE 82
Query: 390 LVRILTPRRSIDILRDVHAAKEQRKPYXXXXXXXXXXXKSTNLAKVAYWLLQHKVSVMMA 449
L++++ P + K +R + K+T K+AY+ + +
Sbjct: 83 LLKLVDPG-----VTPFTPTKGRRNVFMFVGLQGSG--KTTTCTKMAYYYQRKGWKTCLI 135
Query: 450 ACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGR 508
DTFR+GA +QL+ +A + ++P + E DP +A E +++ T+ G ++++VDT+GR
Sbjct: 136 CADTFRAGAFDQLKQNATKARIPFYGSYSEIDPVKIAAEGVEKFTQEGFEIIIVDTSGR 194
>UNIPROTKB|P0AGD7 [details] [associations]
symbol:ffh species:83333 "Escherichia coli K-12"
[GO:0048500 "signal recognition particle" evidence=IEA;IMP]
[GO:0005525 "GTP binding" evidence=IEA;ISS;IMP;IDA] [GO:0006612
"protein targeting to membrane" evidence=IMP] [GO:0030529
"ribonucleoprotein complex" evidence=IDA] [GO:0003924 "GTPase
activity" evidence=IEA;ISS;IMP;IDA] [GO:0008312 "7S RNA binding"
evidence=IEA] [GO:0006614 "SRP-dependent cotranslational protein
targeting to membrane" evidence=IEA] [GO:0005786 "signal
recognition particle, endoplasmic reticulum targeting"
evidence=IEA] [GO:0006184 "GTP catabolic process" evidence=IEA;IMP]
[GO:0003723 "RNA binding" evidence=IEA] HAMAP:MF_00306
InterPro:IPR000897 InterPro:IPR003593 InterPro:IPR004125
InterPro:IPR004780 InterPro:IPR013822 InterPro:IPR022941
Pfam:PF00448 Pfam:PF02881 Pfam:PF02978 PROSITE:PS00300
SMART:SM00382 SMART:SM00962 SMART:SM00963 GO:GO:0005525 EMBL:U00096
EMBL:AP009048 GenomeReviews:AP009048_GR GenomeReviews:U00096_GR
GO:GO:0006612 GO:GO:0003924 GO:GO:0008312 PDB:2XXA PDBsum:2XXA
TCDB:3.A.5.1.1 GO:GO:0006614 SUPFAM:SSF47364 PDB:2XKV PDBsum:2XKV
EMBL:X01818 PDB:2J28 PDBsum:2J28 GO:GO:0005786 eggNOG:COG0541
KO:K03106 Gene3D:1.10.260.30 SUPFAM:SSF47446 HOGENOM:HOG000036164
PANTHER:PTHR11564:SF7 TIGRFAMs:TIGR00959 OMA:GQQVVKI PIR:E65039
RefSeq:NP_417101.1 RefSeq:YP_490833.1 PDB:1DUL PDB:1HQ1 PDB:2PXB
PDB:2PXD PDB:2PXE PDB:2PXF PDB:2PXK PDB:2PXL PDB:2PXP PDB:2PXQ
PDB:2PXT PDB:2PXU PDB:2PXV PDB:3LQX PDBsum:1DUL PDBsum:1HQ1
PDBsum:2PXB PDBsum:2PXD PDBsum:2PXE PDBsum:2PXF PDBsum:2PXK
PDBsum:2PXL PDBsum:2PXP PDBsum:2PXQ PDBsum:2PXT PDBsum:2PXU
PDBsum:2PXV PDBsum:3LQX ProteinModelPortal:P0AGD7 SMR:P0AGD7
DIP:DIP-31865N IntAct:P0AGD7 MINT:MINT-1218614 PRIDE:P0AGD7
EnsemblBacteria:EBESCT00000004690 EnsemblBacteria:EBESCT00000014850
GeneID:12933092 GeneID:947102 KEGG:ecj:Y75_p2558 KEGG:eco:b2610
PATRIC:32120619 EchoBASE:EB0296 EcoGene:EG10300
ProtClustDB:PRK10867 BioCyc:EcoCyc:EG10300-MONOMER
BioCyc:ECOL316407:JW5414-MONOMER EvolutionaryTrace:P0AGD7
Genevestigator:P0AGD7 GO:GO:0048500 Uniprot:P0AGD7
Length = 453
Score = 156 (60.0 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 48/200 (24%), Positives = 94/200 (47%)
Query: 314 TGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKL- 372
T S ++I+G+ L + +++ L+ ++ L+ +VA + + V G ++
Sbjct: 6 TDRLSRTLRNISGRGRLTEDNVKDTLREVRMALLEADVALPVVREFINRVKEKAVGHEVN 65
Query: 373 ASFTRISSIVQAAMEEALVRILTPRRSIDILRDVHAAKEQRKPYXXXXXXXXXXXKSTNL 432
S T V+ E + + +++++ AA+ P K+T++
Sbjct: 66 KSLTPGQEFVKIVRNELVAAMGEENQTLNL-----AAQP---PAVVLMAGLQGAGKTTSV 117
Query: 433 AKVAYWLLQ-HKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQ 491
K+ +L + HK V++ + D +R A++QL T A ++ V F + P + A++
Sbjct: 118 GKLGKFLREKHKKKVLVVSADVYRPAAIKQLETLAEQVGVDFFPSDVGQKPVDIVNAALK 177
Query: 492 EATRNGSDVVLVDTAGRMQV 511
EA DV+LVDTAGR+ V
Sbjct: 178 EAKLKFYDVLLVDTAGRLHV 197
>TAIR|locus:2028563 [details] [associations]
symbol:AT1G48900 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003729 "mRNA
binding" evidence=ISS] [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005786 "signal
recognition particle, endoplasmic reticulum targeting"
evidence=ISS] [GO:0006614 "SRP-dependent cotranslational protein
targeting to membrane" evidence=IEA] [GO:0006617 "SRP-dependent
cotranslational protein targeting to membrane, signal sequence
recognition" evidence=ISS] [GO:0008312 "7S RNA binding"
evidence=IEA;ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0048500 "signal recognition particle"
evidence=IEA] [GO:0005829 "cytosol" evidence=IDA] [GO:0010267
"production of ta-siRNAs involved in RNA interference"
evidence=RCA] [GO:0035196 "production of miRNAs involved in gene
silencing by miRNA" evidence=RCA] [GO:0051607 "defense response to
virus" evidence=RCA] InterPro:IPR000897 InterPro:IPR003593
InterPro:IPR004125 InterPro:IPR006325 InterPro:IPR013822
InterPro:IPR022941 Pfam:PF00448 Pfam:PF02881 Pfam:PF02978
PROSITE:PS00300 SMART:SM00382 SMART:SM00962 SMART:SM00963
GO:GO:0005525 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829
GO:GO:0003924 GO:GO:0006184 EMBL:AC084414 GO:GO:0008312
GO:GO:0006614 SUPFAM:SSF47364 GO:GO:0005786 eggNOG:COG0541
HOGENOM:HOG000036165 KO:K03106 ProtClustDB:CLSN2686827
Gene3D:1.10.260.30 SUPFAM:SSF47446 TIGRFAMs:TIGR01425 EMBL:U12127
EMBL:AY054273 EMBL:AY052331 EMBL:AF446864 IPI:IPI00531486
PIR:G96526 RefSeq:NP_564535.1 UniGene:At.23838
ProteinModelPortal:P49967 SMR:P49967 STRING:P49967 PaxDb:P49967
PRIDE:P49967 EnsemblPlants:AT1G48900.1 GeneID:841312
KEGG:ath:AT1G48900 GeneFarm:1889 TAIR:At1g48900 InParanoid:P49967
OMA:NVQHMSK PhylomeDB:P49967 Genevestigator:P49967
GermOnline:AT1G48900 Uniprot:P49967
Length = 495
Score = 155 (59.6 bits), Expect = 6.3e-08, P = 6.3e-08
Identities = 43/198 (21%), Positives = 89/198 (44%)
Query: 311 AKKTGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVAEEIAEKLCESVAASLEGK 370
A+ G + Q ++ +D+ L L + L+ +V+ + +++ ++ + +
Sbjct: 4 AELGGRITRAIQQMSNVTIIDEKALNECLNEITRALLQSDVSFPLVKEMQSNIKKIVNLE 63
Query: 371 KLASFTRISSIVQAAMEEALVRILTPRRSIDILRDVHAAKEQRKPYXXXXXXXXXXXKST 430
LA+ I++ A+ L ++L P + A ++ K K+T
Sbjct: 64 DLAAGHNKRRIIEQAIFSELCKMLDPGKPA-------FAPKKAKASVVMFVGLQGAGKTT 116
Query: 431 NLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAI 490
K AY+ + + DTFR+GA +QL+ +A + ++P + E DP +A E +
Sbjct: 117 TCTKYAYYHQKKGYKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVKIAVEGV 176
Query: 491 QEATRNGSDVVLVDTAGR 508
+ D+++VDT+GR
Sbjct: 177 DTFKKENCDLIIVDTSGR 194
>TIGR_CMR|GSU_1132 [details] [associations]
symbol:GSU_1132 "signal recognition particle-docking
protein FtsY" species:243231 "Geobacter sulfurreducens PCA"
[GO:0003924 "GTPase activity" evidence=ISS] [GO:0005047 "signal
recognition particle binding" evidence=ISS] [GO:0009306 "protein
secretion" evidence=ISS] HAMAP:MF_00920 InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR004390 InterPro:IPR013822
Pfam:PF00448 Pfam:PF02881 PROSITE:PS00300 SMART:SM00382
SMART:SM00962 SMART:SM00963 GO:GO:0005525 GO:GO:0005737
GO:GO:0003924 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0031226
HOGENOM:HOG000036278 KO:K03110 ProtClustDB:PRK10416 GO:GO:0006614
SUPFAM:SSF47364 TIGRFAMs:TIGR00064 RefSeq:NP_952185.1
ProteinModelPortal:Q74E32 SMR:Q74E32 GeneID:2686843
KEGG:gsu:GSU1132 PATRIC:22025026 OMA:HLMAELE
BioCyc:GSUL243231:GH27-1142-MONOMER Uniprot:Q74E32
Length = 350
Score = 149 (57.5 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 51/187 (27%), Positives = 84/187 (44%)
Query: 324 IAGKANLDKADLEPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLASFTRISSIVQ 383
+ GK +D AD L+ L++ L+T ++ + +L + L +L
Sbjct: 73 VLGKKEID-AD---TLEELEEILITADLGVQTTVELIRGLEQRLSRNELKD--------G 120
Query: 384 AAMEEALVRILTPRRSIDILRDVHAAKEQ-RKPYXXXXXXXXXXXKSTNLAKVAYWLLQH 442
A+ EAL + R + RD H P+ K+T + K+A
Sbjct: 121 EALREALKEDIHGR----LARDAHQLDVTGASPFVIMVIGVNGVGKTTTIGKLAARFTAQ 176
Query: 443 KVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVL 502
V++AA DTFR+ A EQL+ R V + DP+ V ++I+ A G+D+++
Sbjct: 177 GKKVILAAGDTFRAAAAEQLQIWGERTGVDVIRHKEGADPSAVVFDSIKAAVARGADILI 236
Query: 503 VDTAGRM 509
VDTAGR+
Sbjct: 237 VDTAGRL 243
>UNIPROTKB|G3V4F7 [details] [associations]
symbol:SRP54 "Signal recognition particle 54 kDa protein"
species:9606 "Homo sapiens" [GO:0003924 "GTPase activity"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0006614
"SRP-dependent cotranslational protein targeting to membrane"
evidence=IEA] [GO:0008312 "7S RNA binding" evidence=IEA]
[GO:0048500 "signal recognition particle" evidence=IEA]
InterPro:IPR000897 InterPro:IPR003593 InterPro:IPR004125
InterPro:IPR006325 Pfam:PF00448 Pfam:PF02978 PROSITE:PS00300
SMART:SM00382 SMART:SM00962 GO:GO:0005525 GO:GO:0003924
GO:GO:0006184 GO:GO:0008312 GO:GO:0006614 Gene3D:1.10.260.30
SUPFAM:SSF47446 TIGRFAMs:TIGR01425 GO:GO:0048500 EMBL:AL049776
HGNC:HGNC:11301 ChiTaRS:SRP54 ProteinModelPortal:G3V4F7 SMR:G3V4F7
Ensembl:ENST00000555557 ArrayExpress:G3V4F7 Bgee:G3V4F7
Uniprot:G3V4F7
Length = 440
Score = 149 (57.5 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 26/81 (32%), Positives = 49/81 (60%)
Query: 428 KSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAK 487
K+T +K+AY+ + + DTFR+GA +QL+ +A + ++P + E DP I+A
Sbjct: 50 KTTTCSKLAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIAS 109
Query: 488 EAIQEATRNGSDVVLVDTAGR 508
E +++ ++++VDT+GR
Sbjct: 110 EGVEKFKNENFEIIIVDTSGR 130
>CGD|CAL0003314 [details] [associations]
symbol:SRP54 species:5476 "Candida albicans" [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0005786 "signal
recognition particle, endoplasmic reticulum targeting"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0005048
"signal sequence binding" evidence=IEA] [GO:0003924 "GTPase
activity" evidence=IEA] [GO:0008312 "7S RNA binding" evidence=IEA]
[GO:0006614 "SRP-dependent cotranslational protein targeting to
membrane" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=IEA] HAMAP:MF_00306 InterPro:IPR000897 InterPro:IPR003593
InterPro:IPR004125 InterPro:IPR006325 InterPro:IPR013822
InterPro:IPR022941 Pfam:PF00448 Pfam:PF02881 Pfam:PF02978
PROSITE:PS00300 SMART:SM00382 SMART:SM00962 SMART:SM00963
CGD:CAL0003314 GO:GO:0005525 GO:GO:0003924 GO:GO:0006184
EMBL:AACQ01000049 EMBL:AACQ01000048 GO:GO:0008312 GO:GO:0006614
SUPFAM:SSF47364 KO:K03106 Gene3D:1.10.260.30 SUPFAM:SSF47446
TIGRFAMs:TIGR01425 GO:GO:0048500 RefSeq:XP_717868.1
RefSeq:XP_717934.1 ProteinModelPortal:Q5A885 STRING:Q5A885
GeneID:3640377 GeneID:3640507 KEGG:cal:CaO19.10753
KEGG:cal:CaO19.3243 Uniprot:Q5A885
Length = 556
Score = 149 (57.5 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 43/163 (26%), Positives = 82/163 (50%)
Query: 350 NVAEEIAEK-LCESVAASLEGKKLAS--FTRISSIVQAAMEEALVRIL-TPRRSIDILRD 405
N+ +I E + + +A + KKL F + ++V + +E + L T ++I+ +
Sbjct: 52 NIKNKIDESNVSKETSAMNKRKKLQKIIFDELCALVDSNVEPPKPKKLSTSTKTING-KK 110
Query: 406 VHAAKEQRKPYXXXXXXXXXXXKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTH 465
V +KE + K+T+ K+A + + V + DTFR+GA +QL+ +
Sbjct: 111 VRLSKESS--HVIMFVGLQGAGKTTSCTKLAVYYKKRGFKVGLVCADTFRAGAFDQLKQN 168
Query: 466 ARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGR 508
A + +P + E DP +A E +Q+ + D+++VDT+GR
Sbjct: 169 AIKANIPYYGSYLEPDPVKIAFEGVQKFKQEKFDIIIVDTSGR 211
>UNIPROTKB|P66844 [details] [associations]
symbol:ffh "Signal recognition particle protein"
species:1773 "Mycobacterium tuberculosis" [GO:0005618 "cell wall"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0040007 "growth" evidence=IMP] HAMAP:MF_00306
InterPro:IPR000897 InterPro:IPR003593 InterPro:IPR004125
InterPro:IPR004780 InterPro:IPR013822 InterPro:IPR022941
Pfam:PF00448 Pfam:PF02881 Pfam:PF02978 PROSITE:PS00300
SMART:SM00382 SMART:SM00962 SMART:SM00963 GO:GO:0005525
GO:GO:0005886 GO:GO:0040007 GO:GO:0005618 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR GO:GO:0003924
GO:GO:0006184 EMBL:BX842581 GO:GO:0008312 GO:GO:0006614
SUPFAM:SSF47364 TCDB:3.A.5.2.2 GO:GO:0005786 eggNOG:COG0541
KO:K03106 Gene3D:1.10.260.30 SUPFAM:SSF47446 HOGENOM:HOG000036164
PANTHER:PTHR11564:SF7 TIGRFAMs:TIGR00959 OMA:GQQVVKI
ProtClustDB:PRK10867 PIR:D70747 RefSeq:NP_217432.1
RefSeq:NP_337496.1 RefSeq:YP_006516369.1 ProteinModelPortal:P66844
SMR:P66844 PRIDE:P66844 EnsemblBacteria:EBMYCT00000003158
EnsemblBacteria:EBMYCT00000069261 GeneID:13317709 GeneID:888242
GeneID:925291 KEGG:mtc:MT2984 KEGG:mtu:Rv2916c KEGG:mtv:RVBD_2916c
PATRIC:18128328 TubercuList:Rv2916c Uniprot:P66844
Length = 525
Score = 147 (56.8 bits), Expect = 5.3e-07, P = 5.3e-07
Identities = 53/202 (26%), Positives = 85/202 (42%)
Query: 318 SSMFQSIAGKANLDKADLEPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLASFTR 377
++ Q + GK L AD++ + ++ L+ +V+ + + G +++S
Sbjct: 10 TAALQGLRGKGRLTDADIDATTREIRLALLEADVSLPVVRAFIHRIKERARGAEVSSALN 69
Query: 378 ISSIVQAAMEEALVRILTPRRSIDILRDVHAAKEQRKPYXXXXXXXXXXXKSTNLAKVAY 437
+ V + E L+ IL R++ AK P K+T K+A
Sbjct: 70 PAQQVVKIVNEELISILGGET-----RELAFAKTP--PTVVMLAGLQGSGKTTLAGKLAA 122
Query: 438 WLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIF--------EKGYEKDPAIVAKEA 489
L + ++ ACD R AV QL+ R VP+F E G DP VA
Sbjct: 123 RLRGQGHTPLLVACDLQRPAAVNQLQVVGERAGVPVFAPHPGASPESG-PGDPVAVAAAG 181
Query: 490 IQEATRNGSDVVLVDTAGRMQV 511
+ EA DVV+VDTAGR+ +
Sbjct: 182 LAEARAKHFDVVIVDTAGRLGI 203
>TIGR_CMR|SPO_3246 [details] [associations]
symbol:SPO_3246 "signal recognition particle protein"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0005048 "signal sequence binding"
evidence=ISS] [GO:0006617 "SRP-dependent cotranslational protein
targeting to membrane, signal sequence recognition" evidence=ISS]
[GO:0009306 "protein secretion" evidence=ISS] [GO:0048501 "signal
recognition particle, plasma membrane targeting" evidence=ISS]
HAMAP:MF_00306 InterPro:IPR000897 InterPro:IPR003593
InterPro:IPR004125 InterPro:IPR004780 InterPro:IPR013822
InterPro:IPR022941 Pfam:PF00448 Pfam:PF02881 Pfam:PF02978
PROSITE:PS00300 SMART:SM00382 SMART:SM00962 SMART:SM00963
GO:GO:0005525 EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0003924
GO:GO:0006184 GO:GO:0008312 GO:GO:0006614 SUPFAM:SSF47364
GO:GO:0005786 KO:K03106 Gene3D:1.10.260.30 SUPFAM:SSF47446
HOGENOM:HOG000036164 PANTHER:PTHR11564:SF7 TIGRFAMs:TIGR00959
OMA:GQQVVKI ProtClustDB:PRK10867 RefSeq:YP_168449.1
ProteinModelPortal:Q5LNF9 GeneID:3195205 KEGG:sil:SPO3246
PATRIC:23379937 Uniprot:Q5LNF9
Length = 510
Score = 144 (55.7 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 48/195 (24%), Positives = 87/195 (44%)
Query: 318 SSMFQSIAGKANLDKADLEPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLASFTR 377
S +F + + L + D++ AL+ ++ L+ +V+ +A ++V G+ +
Sbjct: 10 SGVFDRLTKQGALSEEDVKTALREVRVALLEADVSLPVARDFVKAVQDKATGQAVTKSVT 69
Query: 378 ISSIVQAAMEEALVRILTPRRSIDILRDVHAAKEQRKPYXXXXXXXXXXXKSTNLAKVAY 437
V + + LV +L R + D K P K+T AK+A
Sbjct: 70 PGQQVVKIVHDTLVDVL---RGAE---DPGKLKIDNPPAPILMVGLQGGGKTTTTAKLAK 123
Query: 438 WLLQHK-VSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRN 496
L + + V+MA+ D +R A++QL ++ V + P +AK A Q+A
Sbjct: 124 RLKEREGKKVLMASLDVYRPAAMDQLAVLGAQIGVDTLPIVPGQKPVDIAKRAKQQAMMG 183
Query: 497 GSDVVLVDTAGRMQV 511
G DV ++DTAGR+ +
Sbjct: 184 GYDVYMLDTAGRLHI 198
>TIGR_CMR|VC_0560 [details] [associations]
symbol:VC_0560 "signal recognition particle protein"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0005048 "signal sequence binding"
evidence=ISS] [GO:0009306 "protein secretion" evidence=ISS]
[GO:0048501 "signal recognition particle, plasma membrane
targeting" evidence=ISS] HAMAP:MF_00306 InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR004125 InterPro:IPR004780
InterPro:IPR013822 InterPro:IPR022941 Pfam:PF00448 Pfam:PF02881
Pfam:PF02978 PROSITE:PS00300 SMART:SM00382 SMART:SM00962
SMART:SM00963 GO:GO:0005525 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0003924 GO:GO:0006184 GO:GO:0008312 GO:GO:0006614
SUPFAM:SSF47364 GO:GO:0005786 KO:K03106 Gene3D:1.10.260.30
SUPFAM:SSF47446 PANTHER:PTHR11564:SF7 TIGRFAMs:TIGR00959
OMA:GQQVVKI ProtClustDB:PRK10867 PIR:H82306 RefSeq:NP_230211.1
HSSP:P07019 ProteinModelPortal:Q9KUG1 SMR:Q9KUG1 DNASU:2615237
GeneID:2615237 KEGG:vch:VC0560 PATRIC:20080238 Uniprot:Q9KUG1
Length = 461
Score = 141 (54.7 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 46/200 (23%), Positives = 92/200 (46%)
Query: 314 TGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLA 373
T S ++I+GK L + +++ L+ ++ L+ +VA + V G +++
Sbjct: 6 TDRLSKTLKNISGKGRLTEDNIKDTLREVRMALLEADVALPVVRDFVNRVKEGAVGVEVS 65
Query: 374 -SFTRISSIVQAAMEEALVRILTPRRSIDILRDVHAAKEQRKPYXXXXXXXXXXXKSTNL 432
S T ++ ++ + ++++ AA+ P K+T++
Sbjct: 66 KSLTPGQEFIKIVRQQLEAVMGESNEALNL-----AAQP---PAVILMAGLQGAGKTTSV 117
Query: 433 AKVAYWLLQH-KVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQ 491
K++ L + K V++ + D +R A++QL T A L V F ++ P +A AI
Sbjct: 118 GKLSKLLKERDKKKVLVVSADVYRPAAIKQLETLANDLGVDFFPSTPDQKPIDIANAAID 177
Query: 492 EATRNGSDVVLVDTAGRMQV 511
A + DV++VDTAGR+ +
Sbjct: 178 HAKKKFYDVLIVDTAGRLAI 197
>TIGR_CMR|ECH_0475 [details] [associations]
symbol:ECH_0475 "signal recognition particle protein"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0003924
"GTPase activity" evidence=ISS] [GO:0005048 "signal sequence
binding" evidence=ISS] [GO:0006617 "SRP-dependent cotranslational
protein targeting to membrane, signal sequence recognition"
evidence=ISS] [GO:0009306 "protein secretion" evidence=ISS]
[GO:0048501 "signal recognition particle, plasma membrane
targeting" evidence=ISS] InterPro:IPR000897 InterPro:IPR003593
InterPro:IPR004125 InterPro:IPR004780 InterPro:IPR013822
Pfam:PF00448 Pfam:PF02881 Pfam:PF02978 SMART:SM00382 SMART:SM00962
SMART:SM00963 GO:GO:0005525 EMBL:CP000236 GenomeReviews:CP000236_GR
GO:GO:0003924 GO:GO:0006184 GO:GO:0008312 GO:GO:0006614
SUPFAM:SSF47364 eggNOG:COG0541 KO:K03106 Gene3D:1.10.260.30
SUPFAM:SSF47446 HOGENOM:HOG000036164 PANTHER:PTHR11564:SF7
TIGRFAMs:TIGR00959 OMA:GQQVVKI ProtClustDB:PRK10867 GO:GO:0048500
RefSeq:YP_507291.1 ProteinModelPortal:Q2GGZ2 STRING:Q2GGZ2
GeneID:3927281 KEGG:ech:ECH_0475 PATRIC:20576422
BioCyc:ECHA205920:GJNR-477-MONOMER Uniprot:Q2GGZ2
Length = 448
Score = 136 (52.9 bits), Expect = 6.6e-06, P = 6.6e-06
Identities = 45/202 (22%), Positives = 90/202 (44%)
Query: 314 TGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLA 373
T +++ Q + K + D + A++ +K L+ +V+ + + +V + G
Sbjct: 6 TSSLTNVIQKMQSKHVISSEDFDAAMEEVKVALLEADVSLAVVKDFISNVKEKIVGGTTV 65
Query: 374 SFTRISSIVQAAMEEALVRILTPRR-SIDILRDVHAAKEQRKPYXXXXXXXXXXXKSTNL 432
+ ++ +++ L+ +L + +DI + + K+T
Sbjct: 66 KGVLPTQMIIKKIQDCLIEVLGSEKCELDISKPLSVIM---------MVGLQGVGKTTTT 116
Query: 433 AKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQV---PIFEKGYEKDPAIVAKEA 489
AK+A L K V+MA+ D +R A +QL +++ V PI E + P + K A
Sbjct: 117 AKLALKLKNKKKEVVMASLDVYRPAAQKQLEILGKQIDVQTLPIIEN---QAPIDIVKRA 173
Query: 490 IQEATRNGSDVVLVDTAGRMQV 511
+ A + DV+++DTAGR+ V
Sbjct: 174 MDNAQQANCDVLILDTAGRLHV 195
>GENEDB_PFALCIPARUM|PF14_0477 [details] [associations]
symbol:PF14_0477 "signal recognition particle
54 kDa protein, putative" species:5833 "Plasmodium falciparum"
[GO:0005048 "signal sequence binding" evidence=ISS] HAMAP:MF_00306
InterPro:IPR000897 InterPro:IPR003593 InterPro:IPR004125
InterPro:IPR006325 InterPro:IPR013822 InterPro:IPR022941
Pfam:PF00448 Pfam:PF02881 Pfam:PF02978 PROSITE:PS00300
SMART:SM00382 SMART:SM00962 SMART:SM00963 GO:GO:0005525
GO:GO:0003924 GO:GO:0006184 EMBL:AE014187 GO:GO:0005048
GO:GO:0008312 GO:GO:0006614 SUPFAM:SSF47364 HOGENOM:HOG000036165
KO:K03106 Gene3D:1.10.260.30 SUPFAM:SSF47446 TIGRFAMs:TIGR01425
GO:GO:0048500 HSSP:P70722 RefSeq:XP_001348651.1
ProteinModelPortal:Q8IKX4 EnsemblProtists:PF14_0477:mRNA
GeneID:812059 KEGG:pfa:PF14_0477 EuPathDB:PlasmoDB:PF3D7_1450100
OMA:QMANALP ProtClustDB:CLSZ2514463 Uniprot:Q8IKX4
Length = 500
Score = 135 (52.6 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 38/192 (19%), Positives = 88/192 (45%)
Query: 318 SSMFQSIAGKANLDKADLEPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLASF-T 376
++ F+ + D +E LK + L+ ++ + + ++ ++E K + +
Sbjct: 11 TNAFRKLQTSTLADDVVIEECLKEIIRALILSDINVSYLKDIKSNIKNNIE-KNIDIYGN 69
Query: 377 RISSIVQAAMEEALVRILTPRRSIDILRDVHAAKEQRKPYXXXXXXXXXXXKSTNLAKVA 436
+VQ + E L+++L ++ + K +R K+T K A
Sbjct: 70 NKKKLVQKYVVEELIKLLEGKKE-----GYNPVKGKRN--VILFVGLQGSGKTTTCTKYA 122
Query: 437 YWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRN 496
++ + + DTFR+GA +QL+ +A ++++P + E DP +A + + ++
Sbjct: 123 HYYQKKGFKTALVCADTFRAGAFDQLKQNAAKVKIPFYGSYSEVDPVKIATDGVNAFLKD 182
Query: 497 GSDVVLVDTAGR 508
D+++VD++GR
Sbjct: 183 KYDLIIVDSSGR 194
>UNIPROTKB|Q8IKX4 [details] [associations]
symbol:PF14_0477 "Signal recognition particle SRP54,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0005048
"signal sequence binding" evidence=ISS] HAMAP:MF_00306
InterPro:IPR000897 InterPro:IPR003593 InterPro:IPR004125
InterPro:IPR006325 InterPro:IPR013822 InterPro:IPR022941
Pfam:PF00448 Pfam:PF02881 Pfam:PF02978 PROSITE:PS00300
SMART:SM00382 SMART:SM00962 SMART:SM00963 GO:GO:0005525
GO:GO:0003924 GO:GO:0006184 EMBL:AE014187 GO:GO:0005048
GO:GO:0008312 GO:GO:0006614 SUPFAM:SSF47364 HOGENOM:HOG000036165
KO:K03106 Gene3D:1.10.260.30 SUPFAM:SSF47446 TIGRFAMs:TIGR01425
GO:GO:0048500 HSSP:P70722 RefSeq:XP_001348651.1
ProteinModelPortal:Q8IKX4 EnsemblProtists:PF14_0477:mRNA
GeneID:812059 KEGG:pfa:PF14_0477 EuPathDB:PlasmoDB:PF3D7_1450100
OMA:QMANALP ProtClustDB:CLSZ2514463 Uniprot:Q8IKX4
Length = 500
Score = 135 (52.6 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 38/192 (19%), Positives = 88/192 (45%)
Query: 318 SSMFQSIAGKANLDKADLEPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLASF-T 376
++ F+ + D +E LK + L+ ++ + + ++ ++E K + +
Sbjct: 11 TNAFRKLQTSTLADDVVIEECLKEIIRALILSDINVSYLKDIKSNIKNNIE-KNIDIYGN 69
Query: 377 RISSIVQAAMEEALVRILTPRRSIDILRDVHAAKEQRKPYXXXXXXXXXXXKSTNLAKVA 436
+VQ + E L+++L ++ + K +R K+T K A
Sbjct: 70 NKKKLVQKYVVEELIKLLEGKKE-----GYNPVKGKRN--VILFVGLQGSGKTTTCTKYA 122
Query: 437 YWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRN 496
++ + + DTFR+GA +QL+ +A ++++P + E DP +A + + ++
Sbjct: 123 HYYQKKGFKTALVCADTFRAGAFDQLKQNAAKVKIPFYGSYSEVDPVKIATDGVNAFLKD 182
Query: 497 GSDVVLVDTAGR 508
D+++VD++GR
Sbjct: 183 KYDLIIVDSSGR 194
>TAIR|locus:2157809 [details] [associations]
symbol:AT5G49500 "AT5G49500" species:3702 "Arabidopsis
thaliana" [GO:0003729 "mRNA binding" evidence=ISS] [GO:0005525 "GTP
binding" evidence=IEA;ISS] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0005786 "signal recognition particle, endoplasmic reticulum
targeting" evidence=ISS] [GO:0006614 "SRP-dependent cotranslational
protein targeting to membrane" evidence=IEA] [GO:0006617
"SRP-dependent cotranslational protein targeting to membrane,
signal sequence recognition" evidence=ISS] [GO:0008312 "7S RNA
binding" evidence=IEA;ISS] [GO:0048500 "signal recognition
particle" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0010267 "production of ta-siRNAs involved in RNA interference"
evidence=RCA] [GO:0035196 "production of miRNAs involved in gene
silencing by miRNA" evidence=RCA] [GO:0051607 "defense response to
virus" evidence=RCA] InterPro:IPR000897 InterPro:IPR004125
InterPro:IPR006325 InterPro:IPR013822 InterPro:IPR022941
Pfam:PF00448 Pfam:PF02881 Pfam:PF02978 PROSITE:PS00300
SMART:SM00962 SMART:SM00963 GO:GO:0005525 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003924 GO:GO:0006184 EMBL:AB023033
GO:GO:0008312 GO:GO:0006614 SUPFAM:SSF47364 GO:GO:0005786
eggNOG:COG0541 HOGENOM:HOG000036165 KO:K03106
ProtClustDB:CLSN2686827 Gene3D:1.10.260.30 SUPFAM:SSF47446
TIGRFAMs:TIGR01425 EMBL:U12126 IPI:IPI00534798 RefSeq:NP_199761.1
UniGene:At.29781 ProteinModelPortal:P49966 SMR:P49966 IntAct:P49966
STRING:P49966 PRIDE:P49966 GeneID:835010 KEGG:ath:AT5G49500
TAIR:At5g49500 InParanoid:P49966 Genevestigator:P49966
GermOnline:AT5G49500 Uniprot:P49966
Length = 497
Score = 132 (51.5 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 42/199 (21%), Positives = 86/199 (43%)
Query: 311 AKKTGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVAEEIAEKLCESVAASLEGK 370
A+ G S Q + +D+ L L + L+ +V+ + +++ ++ + +
Sbjct: 4 AELGGRIMSAIQKMNNVTIIDEKALNDCLNEITRALLQSDVSFPLVKEMQTNIKKIVNLE 63
Query: 371 KLASFTRISSIVQAAMEEALVRILTPRRSIDILRDVHAAKEQRKPYXXXXXXXXXXXKST 430
LA+ I++ A+ L ++L P +S A K+ + +
Sbjct: 64 DLAAGHNKRRIIEQAIFSELCKMLDPGKS------AFAPKKAKPSVVMFVGLQGEVLEKP 117
Query: 431 NLAKVAYWLLQHKVSVMMAAC-DTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEA 489
L +++ K C DTFR+GA +QL+ +A + ++P + DP +A E
Sbjct: 118 QLVPSMLIIIRRKGYKPALVCADTFRAGAFDQLKQNATKSKIPYYGSYTGSDPVKIAVEG 177
Query: 490 IQEATRNGSDVVLVDTAGR 508
+ + D+++VDT+GR
Sbjct: 178 VDRFKKENCDLIIVDTSGR 196
>UNIPROTKB|Q722L6 [details] [associations]
symbol:LMOf2365_0717 "Putative flagellar biosynthesis
protein FlhF" species:265669 "Listeria monocytogenes serotype 4b
str. F2365" [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR000897 InterPro:IPR020006 Pfam:PF00448 GO:GO:0005525
GO:GO:0005886 GO:GO:0019861 EMBL:AE017262 GenomeReviews:AE017262_GR
GO:GO:0043064 GO:GO:0006614 eggNOG:COG1419 KO:K02404
TIGRFAMs:TIGR03499 RefSeq:YP_013321.1 ProteinModelPortal:Q722L6
STRING:Q722L6 GeneID:2797398 KEGG:lmf:LMOf2365_0717 PATRIC:20322642
HOGENOM:HOG000254016 OMA:QFHGKKK ProtClustDB:PRK12726
Uniprot:Q722L6
Length = 407
Score = 121 (47.7 bits), Expect = 0.00025, P = 0.00025
Identities = 42/121 (34%), Positives = 61/121 (50%)
Query: 428 KSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAK 487
K+T L K+ + LL+ +V DTFRSGAVEQ + +A +L V + PA + +
Sbjct: 219 KTTTLVKLGWQLLKQNRTVGFITTDTFRSGAVEQFQGYADKLDVELI---VATSPAEL-E 274
Query: 488 EAIQEATR-NGSDVVLVDTAGRMQVIIEYYLFLLHIYLHTVCEHFVNIITFR-GMWSFDC 545
EA+Q T N D +L+DT GR + E + + Y V + TF GM S D
Sbjct: 275 EAVQYMTYVNCVDHILIDTVGR-NYLAEESVSEISAYTDVVHPD-LTCFTFSSGMKSADV 332
Query: 546 L 546
+
Sbjct: 333 M 333
>TIGR_CMR|CJE_0061 [details] [associations]
symbol:CJE_0061 "flagellar biosynthetic protein FlhF"
species:195099 "Campylobacter jejuni RM1221" [GO:0001539 "ciliary
or flagellar motility" evidence=ISS] [GO:0005525 "GTP binding"
evidence=ISS] [GO:0009296 "flagellum assembly" evidence=ISS]
InterPro:IPR000897 InterPro:IPR003593 InterPro:IPR020006
Pfam:PF00448 SMART:SM00382 SMART:SM00962 GO:GO:0005525
GO:GO:0005886 GO:GO:0019861 EMBL:CP000025 GenomeReviews:CP000025_GR
GO:GO:0017111 GO:GO:0043064 GO:GO:0006614 eggNOG:COG1419 KO:K02404
HOGENOM:HOG000254735 ProtClustDB:PRK05703 TIGRFAMs:TIGR03499
RefSeq:YP_178086.1 ProteinModelPortal:Q5HX99 STRING:Q5HX99
GeneID:3230824 KEGG:cjr:CJE0061 PATRIC:20041827 OMA:KVATNEY
BioCyc:CJEJ195099:GJC0-65-MONOMER Uniprot:Q5HX99
Length = 484
Score = 119 (46.9 bits), Expect = 0.00055, P = 0.00055
Identities = 62/239 (25%), Positives = 104/239 (43%)
Query: 312 KKTGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVAEEIAEKLCESVAASL--EG 369
KK F F+ K N DK DL L D +M + AE + AS+ +
Sbjct: 176 KKIENFEKQFEKQINKLN-DKIDL------LAD-MMWDDKAEARKNLIIPPEFASIYKQA 227
Query: 370 KKLASF-TRISSIVQAAMEEALVRILTPRRSID-----ILRDVHAAKEQ---RKPYXXXX 420
K+ + +I++A +E + T + ++ +LR++ + + +K
Sbjct: 228 KESGMLENHLEAIMKATIENMPAAMKTNKDAVQRYFHSLLRNILPCRVESDIKKQKIMML 287
Query: 421 XXXXXXXKSTNLAKVA----YWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEK 476
K+T LAK+A Y ++K ++ DT+R GAVEQL +A+ +++PI +
Sbjct: 288 VGPTGVGKTTTLAKLAFRYAYGDKRYKTGII--TLDTYRIGAVEQLFQYAKMMKLPIIDS 345
Query: 477 GYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQVIIEYYLFLLHIYLHTVCEHFVNII 535
KD EAI+ N +V+LVDT G Q +H+ E VN++
Sbjct: 346 IEPKD----LDEAIKSL--NNCEVILVDTIGNSQYDQSKLAKTKEFLMHSNAEIDVNLV 398
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.132 0.380 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 552 478 0.00079 119 3 11 22 0.41 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 77
No. of states in DFA: 617 (66 KB)
Total size of DFA: 276 KB (2146 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 37.14u 0.12s 37.26t Elapsed: 00:00:02
Total cpu time: 37.15u 0.12s 37.27t Elapsed: 00:00:02
Start: Sat May 11 01:19:14 2013 End: Sat May 11 01:19:16 2013