BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 008818
(552 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255540413|ref|XP_002511271.1| o-linked n-acetylglucosamine transferase, ogt, putative [Ricinus
communis]
gi|223550386|gb|EEF51873.1| o-linked n-acetylglucosamine transferase, ogt, putative [Ricinus
communis]
Length = 650
Score = 670 bits (1729), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 349/478 (73%), Positives = 394/478 (82%), Gaps = 11/478 (2%)
Query: 8 VPVKSESGTAESSTEDISKTGQASKLFILADLNNNPPETDADANTSPLVSAPELSRLTNE 67
P+K+E E+S +D SK Q KL +LADLN NPPETD N S +S P+LSRLTN+
Sbjct: 13 TPIKTELNAMETSLDDSSKAAQPPKLVVLADLNANPPETDT--NDSVNLSVPDLSRLTND 70
Query: 68 DSNHSSSHHDKGSILMSKEMDVAEVEGKKINKLGKCRSRISSKMDSALEFGVDADGDQSG 127
+S DK S+ KE D E EGKK+NKLGKCRSR +SK+D++L++G D D DQ G
Sbjct: 71 ES------QDKSSV-ACKEGDTVEFEGKKLNKLGKCRSR-NSKLDASLDYGPDIDADQPG 122
Query: 128 LGTSSSSREEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEIL 187
G SS REEKVSSLKTGLVHVA+KMPKNAHAHF+LGLMYQRLGQP KAV +YEKAEEIL
Sbjct: 123 QGPISS-REEKVSSLKTGLVHVAKKMPKNAHAHFILGLMYQRLGQPQKAVFAYEKAEEIL 181
Query: 188 LRCEADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQ 247
LR EA++ARPE LSLVQIHHAQC+L E+S DNSLDKELE EELEE+LS++KESMQSD RQ
Sbjct: 182 LRSEAEVARPEFLSLVQIHHAQCILLENSSDNSLDKELEAEELEEVLSRMKESMQSDVRQ 241
Query: 248 AVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQD 307
A VWNTLGLILLKSGRLQS+ISV SSLLA+D +N DC+GNLGIAY QSGD+E SAKCFQ+
Sbjct: 242 AAVWNTLGLILLKSGRLQSAISVWSSLLAMDTSNYDCLGNLGIAYLQSGDLELSAKCFQE 301
Query: 308 LILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKAD 367
LILKDQNHPAA +NYAALLLCKYGSV+AG GAN GEGA + A V+VA ECLLA LK D
Sbjct: 302 LILKDQNHPAAFVNYAALLLCKYGSVVAGPGANAGEGASVYWAEPVHVAMECLLAGLKVD 361
Query: 368 PKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQEPTE 427
PKAAH+WANLANAYYLTGD+RSS KCLEK+AKLEPNCM TRYAVAV RIKDAERSQ+P E
Sbjct: 362 PKAAHLWANLANAYYLTGDYRSSSKCLEKSAKLEPNCMCTRYAVAVQRIKDAERSQDPNE 421
Query: 428 QLSWAGNEMASILREGDPVQIEPPIAWAGFAAVQKTHHEVAAAFETEENELSKMEECA 485
QLSWAGNEMASILREG+ V IE PIAWAG A V K HE+AAAFETE NEL+ +EE A
Sbjct: 422 QLSWAGNEMASILREGESVPIEFPIAWAGLAMVHKAQHEIAAAFETERNELADVEERA 479
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 43/58 (74%), Positives = 47/58 (81%)
Query: 485 AGAGESAFLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEK 542
A AGE A + A V+VA ECLLA LK DPKAAH+WANLANAYYLTGD+RSS KCLEK
Sbjct: 333 ANAGEGASVYWAEPVHVAMECLLAGLKVDPKAAHLWANLANAYYLTGDYRSSSKCLEK 390
>gi|225456798|ref|XP_002275611.1| PREDICTED: probable UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase SPINDLY [Vitis vinifera]
gi|297733645|emb|CBI14892.3| unnamed protein product [Vitis vinifera]
Length = 658
Score = 657 bits (1695), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/535 (65%), Positives = 418/535 (78%), Gaps = 27/535 (5%)
Query: 7 PVPVKSESGTAESSTEDISKTGQASKLFILADLNNNPPETDADANTSPLVSAPELSRLTN 66
P+P+KSE G E+S ++ SK Q SK+ +LADLN +PPETD D S VSAP+L+RLTN
Sbjct: 11 PLPIKSEVGVTENSADESSKRPQISKVVVLADLNVDPPETDDD--DSLHVSAPDLTRLTN 68
Query: 67 EDSNHSSSHHDKGSILMSKEMDVAEVEGKKINKLGKCRSRISSKMDSALEFGVDADGDQS 126
+DS+ DK S L+SK+ D+ + EGK++NKLGK RSR++ K++ L++G DAD DQ
Sbjct: 69 DDSSQ-----DK-STLVSKDTDMVDGEGKRLNKLGKPRSRVT-KVEYPLDYGADADADQH 121
Query: 127 GLGTSSSSREEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEI 186
G G + +SREEKVSSLKTGLVHVARKMPKNAHAHF+LGLMYQRLGQP KAVS+YEKA EI
Sbjct: 122 GQG-APTSREEKVSSLKTGLVHVARKMPKNAHAHFILGLMYQRLGQPQKAVSAYEKAAEI 180
Query: 187 LLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTR 246
LLRCE +I RPELLSLVQIHHAQCLL SSGD+S DKELEPEELEEIL K+K+SMQSD R
Sbjct: 181 LLRCEEEIDRPELLSLVQIHHAQCLLLGSSGDHSADKELEPEELEEILLKMKDSMQSDIR 240
Query: 247 QAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQ 306
QA VWNTLGLILL++GRLQ++ISVLSSLL + P+N DC+GNLGIAY +SG++E + KCFQ
Sbjct: 241 QAAVWNTLGLILLRTGRLQNAISVLSSLLTIAPDNLDCLGNLGIAYLRSGNLELAEKCFQ 300
Query: 307 DLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKA 366
+LILKDQNHPAALINYAA+L+CKYGS++AGAGAN+GEGA DQ A NVAKECLLAA+K
Sbjct: 301 NLILKDQNHPAALINYAAVLMCKYGSIIAGAGANSGEGASEDQLIAANVAKECLLAAVKV 360
Query: 367 DPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQEPT 426
+PKAAH+WANLANAYYL GD RSS KC EKAAKLEPNCMSTRYAVAV +IKDAER Q+P+
Sbjct: 361 EPKAAHVWANLANAYYLMGDCRSSSKCFEKAAKLEPNCMSTRYAVAVHQIKDAERYQDPS 420
Query: 427 EQLSWAGNEMASILREGDPVQIEPPIAWAGFAAVQKTHHEVAAAFETEENELSKMEECAG 486
EQLSWAGNEMASILREGD IE PIAWAG A V K +E+AAAFETE L +MEE
Sbjct: 421 EQLSWAGNEMASILREGDSALIEHPIAWAGLAMVHKIQNEIAAAFETEHKGLMEMEE--- 477
Query: 487 AGESAFLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLE 541
AV++ K+ A+ DP A W L ++S K L+
Sbjct: 478 ----------RAVHILKQ----AIAEDPDDAVQWHQLGLHNLCVQQFKTSQKYLK 518
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/58 (72%), Positives = 46/58 (79%)
Query: 485 AGAGESAFLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEK 542
A +GE A DQ A NVAKECLLAA+K +PKAAH+WANLANAYYL GD RSS KC EK
Sbjct: 333 ANSGEGASEDQLIAANVAKECLLAAVKVEPKAAHVWANLANAYYLMGDCRSSSKCFEK 390
>gi|356507317|ref|XP_003522414.1| PREDICTED: tetratricopeptide repeat protein 37-like [Glycine max]
Length = 644
Score = 607 bits (1564), Expect = e-171, Method: Compositional matrix adjust.
Identities = 312/471 (66%), Positives = 369/471 (78%), Gaps = 11/471 (2%)
Query: 15 GTAESSTEDISKTGQASKLFILADLNNNPPETDADANTSPLVSAPELSRLTNEDSNHSSS 74
G AE S+ + A+KL +LADLN +PPE +A+ S LV P ++ L N++++
Sbjct: 6 GAAEESSNSKAFHHTATKLVVLADLNVDPPEAEAEEVDSSLVPPPPITILGNDENSQ--- 62
Query: 75 HHDKGSILMSKEMDVAEVEGKKINKLGKCRSRISSKMDSALEFGVDADGDQSGLGTSSSS 134
DK S +SK+ D E E KK+NKL K RSR K DS+L+ D DGDQ G SS
Sbjct: 63 --DKSS--LSKDTDSIEGESKKLNKLSKSRSR---KTDSSLDCVADVDGDQHVQGPPSS- 114
Query: 135 REEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADI 194
REEKVSS+KTGLVHVARKMPKNAHAHF+LGLMYQRL QP KAV +YEKAEEILLR EA+I
Sbjct: 115 REEKVSSVKTGLVHVARKMPKNAHAHFILGLMYQRLSQPQKAVLAYEKAEEILLRPEAEI 174
Query: 195 ARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTL 254
RPELLSLVQIHHAQCL+ ESS +NS DKELEP ELEEIL KLK+S++SD RQ VWNTL
Sbjct: 175 DRPELLSLVQIHHAQCLILESSSENSSDKELEPHELEEILFKLKQSVRSDIRQTAVWNTL 234
Query: 255 GLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQN 314
G ILLK+GR+QS+ISVLSSLL++ P N DC+GNLGIAY Q G++E SAKCFQ+LILKDQN
Sbjct: 235 GFILLKTGRMQSAISVLSSLLSIAPENYDCLGNLGIAYLQIGNLELSAKCFQELILKDQN 294
Query: 315 HPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIW 374
HPAAL+NYAALLLCKY SV+AG GA EGA DQ A NVAKECLLAA+KAD K+AH+W
Sbjct: 295 HPAALVNYAALLLCKYASVVAGPGAIAAEGALTDQIMAANVAKECLLAAVKADSKSAHVW 354
Query: 375 ANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQEPTEQLSWAGN 434
ANLA A+ ++GDHRSS KCLEKAAKLEPNCMSTRYAVA+ RIK+AERSQ+PTE LS AGN
Sbjct: 355 ANLAYAFSISGDHRSSSKCLEKAAKLEPNCMSTRYAVAIHRIKEAERSQDPTELLSCAGN 414
Query: 435 EMASILREGDPVQIEPPIAWAGFAAVQKTHHEVAAAFETEENELSKMEECA 485
EMASI+R+ D +E PI W+G A V K HE+AAA+E+E+N L ++EE A
Sbjct: 415 EMASIIRDSDSSLVEIPIVWSGLAMVHKAQHEIAAAYESEQNGLREVEERA 465
>gi|224119546|ref|XP_002318101.1| predicted protein [Populus trichocarpa]
gi|222858774|gb|EEE96321.1| predicted protein [Populus trichocarpa]
Length = 665
Score = 597 bits (1538), Expect = e-168, Method: Compositional matrix adjust.
Identities = 330/483 (68%), Positives = 387/483 (80%), Gaps = 18/483 (3%)
Query: 10 VKSESGTAES-STEDISKTGQAS-KLFILADLNNNPPETDADANTSPLVSAPELSRLTNE 67
+K E T ++ STE SK Q KL ILADLN NPPE+D S +S +L++L +E
Sbjct: 15 IKPELVTVDANSTETTSKIPQPPHKLVILADLNANPPESDT--TDSLHLSPSDLTKLKDE 72
Query: 68 DSNHSSSHHDKGSILMSKEMDV-AEVE----GKKINKLGKCRSRISSKMDSALEFGVDAD 122
D L SKE D A VE K +KLGK RSR +SK+D+ L++G D D
Sbjct: 73 -------AQDNKPNLTSKEADNNAAVEVTEGKKSSSKLGKSRSR-NSKLDNPLDYGPDND 124
Query: 123 GDQSGLGTSSSSREEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEK 182
DQ G SS REE+VSSLKTGL+HVA+KMPKNAHAHF+LGLMYQRL QP KA+ +YEK
Sbjct: 125 NDQPNQGPSSY-REERVSSLKTGLLHVAKKMPKNAHAHFILGLMYQRLSQPQKAILAYEK 183
Query: 183 AEEILLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQ 242
AEEILLRCEA++ARP+LLSLVQIHHAQC+L E+SGDNSL+KELE +ELE++L KLKESMQ
Sbjct: 184 AEEILLRCEAEVARPDLLSLVQIHHAQCILLETSGDNSLEKELEGQELEDVLFKLKESMQ 243
Query: 243 SDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSA 302
SD RQ VWNTLGLILLKSGR+QS++SVLS+L+AVDPNN DC+ NLGIA+ QSG++E SA
Sbjct: 244 SDIRQVAVWNTLGLILLKSGRVQSAVSVLSALMAVDPNNYDCLANLGIAFLQSGNLELSA 303
Query: 303 KCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLA 362
KCFQDLILKDQNHP++L+NYAA+LL KYGSV+AGAGAN G GA +DQA A+NVAKECLLA
Sbjct: 304 KCFQDLILKDQNHPSSLVNYAAVLLSKYGSVVAGAGANAGVGASVDQAEAINVAKECLLA 363
Query: 363 ALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERS 422
ALK +PKAAHIWANLANAY++ GDHRS+ KCLEKAAKLEPNCMSTRYAVAV RIKDAERS
Sbjct: 364 ALKLEPKAAHIWANLANAYFMIGDHRSASKCLEKAAKLEPNCMSTRYAVAVHRIKDAERS 423
Query: 423 QEPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFAAVQKTHHEVAAAFETEENELSKME 482
Q+P+EQLS AGNEMASILREGD V I+ PIAWAG V K HE+AAAF+TE NEL ++E
Sbjct: 424 QDPSEQLSLAGNEMASILREGDSVPIDLPIAWAGLGMVHKAQHEIAAAFDTESNELMEVE 483
Query: 483 ECA 485
E A
Sbjct: 484 ERA 486
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/50 (80%), Positives = 46/50 (92%)
Query: 493 LDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEK 542
+DQA A+NVAKECLLAALK +PKAAHIWANLANAY++ GDHRS+ KCLEK
Sbjct: 348 VDQAEAINVAKECLLAALKLEPKAAHIWANLANAYFMIGDHRSASKCLEK 397
>gi|356516597|ref|XP_003526980.1| PREDICTED: probable UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase SPINDLY-like [Glycine
max]
Length = 629
Score = 591 bits (1523), Expect = e-166, Method: Compositional matrix adjust.
Identities = 303/455 (66%), Positives = 363/455 (79%), Gaps = 12/455 (2%)
Query: 31 SKLFILADLNNNPPETDADANTSPLVSAPELSRLTNEDSNHSSSHHDKGSILMSKEMDVA 90
+KL +LADLN + ++S LV P ++ L N++++ DK S +SK+ D
Sbjct: 8 TKLVVLADLNVEAEAEAEEDDSS-LVPPPLITILANDENSQ-----DKSS--LSKDTDSI 59
Query: 91 EVEGKKINKLGKCRSRISSKMDSALEFGVDADGDQSGLGTSSSSREEKVSSLKTGLVHVA 150
E E KK+NKL K RSR K DS+L+F D DGDQ G SS REEKVSS+KTGLVHVA
Sbjct: 60 EAESKKLNKLSKSRSR---KTDSSLDFVADVDGDQHVQGPPSS-REEKVSSVKTGLVHVA 115
Query: 151 RKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQC 210
RKMPKNAHAHF+LGLMYQRL QP KAV +YEKAEEILLR EA+I RPELLSLVQIHHAQC
Sbjct: 116 RKMPKNAHAHFILGLMYQRLSQPQKAVLAYEKAEEILLRPEAEIDRPELLSLVQIHHAQC 175
Query: 211 LLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISV 270
L+ ESS +NS DKELEP+ELEEILSKLKES++SD RQ VWNTLG ILLK+GR++S++SV
Sbjct: 176 LILESSSENSSDKELEPDELEEILSKLKESVKSDIRQTAVWNTLGFILLKTGRVKSAVSV 235
Query: 271 LSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKY 330
LSSLL++ P N DC+GNLGIAY + G++E SAKCFQ+LILKDQNHPAAL+NYAALLLCKY
Sbjct: 236 LSSLLSIAPENYDCLGNLGIAYLKIGNLELSAKCFQELILKDQNHPAALVNYAALLLCKY 295
Query: 331 GSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSS 390
SV+AG GA+ EGA DQ + NVAKECLLAA+KAD K+AH+WANLA A+ ++GDHRSS
Sbjct: 296 ASVVAGPGASAAEGAMTDQIMSANVAKECLLAAVKADSKSAHVWANLACAFSISGDHRSS 355
Query: 391 GKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQEPTEQLSWAGNEMASILREGDPVQIEP 450
KCLEKAAKLEPNCMSTRYAVA RIK+AERSQ+P+E LS AGNEMASI+R+GD +E
Sbjct: 356 SKCLEKAAKLEPNCMSTRYAVAFHRIKEAERSQDPSELLSCAGNEMASIIRDGDSSLVEI 415
Query: 451 PIAWAGFAAVQKTHHEVAAAFETEENELSKMEECA 485
PIAW+G A V K HE+AAA+E+E+N L ++EE A
Sbjct: 416 PIAWSGLAMVHKAQHEIAAAYESEQNGLREVEERA 450
>gi|297793915|ref|XP_002864842.1| tetratricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297310677|gb|EFH41101.1| tetratricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 650
Score = 582 bits (1499), Expect = e-163, Method: Compositional matrix adjust.
Identities = 322/556 (57%), Positives = 406/556 (73%), Gaps = 32/556 (5%)
Query: 8 VPVKSESGTAESSTEDISKTGQASKLFILADLNNNPPETDADANTSPLVSAPELSRLTNE 67
+ VK E TA+S T T + KL +LADLN NPPE D D ++S + AP ++RLTNE
Sbjct: 7 IAVKYEPMTADSPT-----TARPPKLVVLADLNFNPPEND-DLDSSIQIPAPPITRLTNE 60
Query: 68 DSNHSSSHHDKGSILMSKEMDVAEVEGKKINKLGKCRSRISSKMDSALEFGVDADGDQSG 127
+S H +G L K+++ EVE KKI+K+GKCRSR SK++ + + G+DADGDQ+
Sbjct: 61 ES------HQEGDTLPCKDVEPGEVEAKKISKVGKCRSR--SKIEPSSDCGLDADGDQAN 112
Query: 128 LGTSSSSREEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEIL 187
G +S REEK+S+LK GL+HVARKMPKNAHAHF+LGLM+QRLGQP KA+ YEKAEEIL
Sbjct: 113 QGVPAS-REEKISNLKMGLIHVARKMPKNAHAHFILGLMFQRLGQPQKAIPEYEKAEEIL 171
Query: 188 LRCEADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQ 247
L CE +IARPELL LVQIHH QCLL + GD KELE EELEEILSKLK+S++ D RQ
Sbjct: 172 LGCEPEIARPELLLLVQIHHGQCLLLDGFGDTDSVKELEGEELEEILSKLKDSIKLDVRQ 231
Query: 248 AVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQD 307
A VWNTLGL+LLK+G L S++SVLSSLLA+ P+N DC+ NLG+AY QSGDME SAKCFQD
Sbjct: 232 AAVWNTLGLMLLKAGCLMSAVSVLSSLLALVPDNYDCLANLGVAYLQSGDMELSAKCFQD 291
Query: 308 LILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKAD 367
L+LKD NHPAALINYAA LLCK+ S +AGAGAN G DQ + +NVAKECLLAAL++D
Sbjct: 292 LVLKDHNHPAALINYAAELLCKHSSTVAGAGANGGADTSEDQKAPMNVAKECLLAALRSD 351
Query: 368 PKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQEPTE 427
PK+AH W NLAN+YY+ GDHRSS KCLEKAAKL+PNCM+TR+AVAV RIKDAERSQ ++
Sbjct: 352 PKSAHAWVNLANSYYMMGDHRSSSKCLEKAAKLDPNCMATRFAVAVQRIKDAERSQNASD 411
Query: 428 QLSWAGNEMASILREGDPVQIEPPIAWAGFAAVQKTHHEVAAAFETEENELSKMEECA-- 485
QLSWAGNEMAS++REG+ V I+PPIAWAG A K HE+AAAF + NEL++MEE A
Sbjct: 412 QLSWAGNEMASVIREGESVPIDPPIAWAGLAMAHKAQHEIAAAFVADRNELTEMEERAVY 471
Query: 486 GAGESAFLDQASAVN---------------VAKECLLAALKADPKAAHIWANLANAYYLT 530
++ D AV ++++ + AA+ + ++ W+NL + L+
Sbjct: 472 SLKQAVTEDPEDAVRWHQLGLHSLCSQQYKLSQKYIKAAVGRSRECSYAWSNLGISLQLS 531
Query: 531 GDHRSSGKCLEKVLMV 546
+H + + ++ L V
Sbjct: 532 DEHSEAEEVYKRALAV 547
>gi|449469594|ref|XP_004152504.1| PREDICTED: probable UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase SPINDLY-like [Cucumis
sativus]
Length = 647
Score = 576 bits (1484), Expect = e-161, Method: Compositional matrix adjust.
Identities = 309/478 (64%), Positives = 386/478 (80%), Gaps = 10/478 (2%)
Query: 8 VPVKSESGTAESSTEDISKTGQASKLFILADLNNNPPETDADANTSPLVSAPELSRLTNE 67
+P+K+E G +SS +D SK +SK+ +LADLN +PPE D D +S VSA +SRL+ +
Sbjct: 1 MPLKTEHGAPDSSLDDHSKAVYSSKVVVLADLNVDPPEMDDD--SSVHVSASTISRLSVD 58
Query: 68 DSNHSSSHHDKGSILMSKEMDVAEVEGKKINKLGKCRSRISSKMDSALEFGVDADGDQSG 127
+SNH DK ++ + K+ + EVEG++++K+GKCRSR ++K++ +L+ D DGDQ G
Sbjct: 59 ESNH-----DK-TVEICKDTNAMEVEGRRVSKIGKCRSR-NNKVEYSLDSAADPDGDQHG 111
Query: 128 LGTSSSSREEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEIL 187
G S+S REEKVSSLKTGLVHVARKMPKNAHAHF+LGLMYQRLGQP KAV +YEKAEEIL
Sbjct: 112 QGVSTS-REEKVSSLKTGLVHVARKMPKNAHAHFILGLMYQRLGQPQKAVLAYEKAEEIL 170
Query: 188 LRCEADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQ 247
L+ + +I RPE LSL+QIHHAQCLL ES GDN+ ++ELE EEL+++ SKLK SMQSD RQ
Sbjct: 171 LQSDVEIHRPEFLSLIQIHHAQCLLLESVGDNTSNEELEQEELDDVCSKLKHSMQSDVRQ 230
Query: 248 AVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQD 307
A VWNTLGL+LL +GR++S+I+VLSSLLA+ PNNCDC+GNLGIAY QSG+ME S KCFQ+
Sbjct: 231 AAVWNTLGLLLLTTGRVKSAITVLSSLLAIVPNNCDCLGNLGIAYLQSGNMELSEKCFQE 290
Query: 308 LILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKAD 367
LIL DQNH AAL+ YAA LLCKYGS + GAGAN GEG ++ +NVAKECLLAALK D
Sbjct: 291 LILTDQNHLAALVYYAAFLLCKYGSTVVGAGANAGEGGVDEKVVGMNVAKECLLAALKVD 350
Query: 368 PKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQEPTE 427
PKAAH WANLANAY++TGDHRSS KCLEK AKLEPNCMS RYAVA+ R+KDAERSQ+ +E
Sbjct: 351 PKAAHAWANLANAYFVTGDHRSSAKCLEKGAKLEPNCMSMRYAVAMHRLKDAERSQDRSE 410
Query: 428 QLSWAGNEMASILREGDPVQIEPPIAWAGFAAVQKTHHEVAAAFETEENELSKMEECA 485
QLSWAGNEMAS++R+GD + I+ +AWAGF+ V K HE+AA F T+++EL + E+ A
Sbjct: 411 QLSWAGNEMASVIRDGDGLTIDHSVAWAGFSMVHKIQHEIAAGFRTDQSELREKEDHA 468
>gi|51969340|dbj|BAD43362.1| unknown protein [Arabidopsis thaliana]
Length = 649
Score = 573 bits (1478), Expect = e-161, Method: Compositional matrix adjust.
Identities = 323/556 (58%), Positives = 407/556 (73%), Gaps = 33/556 (5%)
Query: 8 VPVKSESGTAESSTEDISKTGQASKLFILADLNNNPPETDADANTSPLVSAPELSRLTNE 67
+ VK E T +S + + KL +LADLN NPPETD ++ P+ + P ++RL+NE
Sbjct: 7 IAVKCEPMTVDSPSRPL-------KLVVLADLNFNPPETDDLDSSIPIPTPPPITRLSNE 59
Query: 68 DSNHSSSHHDKGSILMSKEMDVAEVEGKKINKLGKCRSRISSKMDSALEFGVDADGDQSG 127
+S H +G IL KE++ EVE KKI+K+GKCRSR SK++S+ + GVDADGD +
Sbjct: 60 ES------HQEGGILTCKEVEPGEVEAKKISKVGKCRSR--SKIESSSDCGVDADGDLAN 111
Query: 128 LGTSSSSREEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEIL 187
G +S REEK+S+LK GL+HVARKMPKNAHAHF+LGLM+QRLGQ KA+ YEKAEEIL
Sbjct: 112 QGVPAS-REEKISNLKMGLIHVARKMPKNAHAHFILGLMFQRLGQSQKAIPEYEKAEEIL 170
Query: 188 LRCEADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQ 247
L CE +IARPELL LVQIHH QCLL + GD KELE EELEEILSKLK+S++ D RQ
Sbjct: 171 LGCEPEIARPELLLLVQIHHGQCLLLDGFGDTDSVKELEGEELEEILSKLKDSIKLDVRQ 230
Query: 248 AVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQD 307
A VWNTLGL+LLK+GRL S+ISVLSSLLA+ P+N DC+ NLG+AY QSGDME SAKCFQD
Sbjct: 231 AAVWNTLGLMLLKAGRLMSAISVLSSLLALVPDNYDCLANLGVAYLQSGDMELSAKCFQD 290
Query: 308 LILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKAD 367
L+LKD NHPAALINYAA LLCK+ S +AGAGAN G A DQ + +NVAKECLLAAL++D
Sbjct: 291 LVLKDHNHPAALINYAAELLCKHSSTVAGAGANGGADASEDQKAPMNVAKECLLAALRSD 350
Query: 368 PKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQEPTE 427
PK+AH W NLAN+YY+ GDHRSS KCLEKAAKL+PNCM+TR+AVAV RIKDAERSQ+ ++
Sbjct: 351 PKSAHAWVNLANSYYMMGDHRSSSKCLEKAAKLDPNCMATRFAVAVQRIKDAERSQDASD 410
Query: 428 QLSWAGNEMASILREGDPVQIEPPIAWAGFAAVQKTHHEVAAAFETEENELSKMEECA-- 485
QLSWAGNEMAS++REG+ V I+PPIAWAG A K HE+AAAF + NEL++MEE A
Sbjct: 411 QLSWAGNEMASVIREGESVPIDPPIAWAGLAMAHKAQHEIAAAFVADRNELTEMEERAVY 470
Query: 486 GAGESAFLDQASAVN---------------VAKECLLAALKADPKAAHIWANLANAYYLT 530
++ D AV ++++ L AA+ + ++ W+NL + L+
Sbjct: 471 SLKQAVTEDPEDAVRWHQLGLHSLCSQQYKLSQKYLKAAVGRSRECSYAWSNLGISLQLS 530
Query: 531 GDHRSSGKCLEKVLMV 546
+H + + ++ L V
Sbjct: 531 DEHSEAEEVYKRALTV 546
>gi|30697806|ref|NP_201125.2| tetratricopeptide repeat (TPR)-containing protein [Arabidopsis
thaliana]
gi|51971054|dbj|BAD44219.1| unknown protein [Arabidopsis thaliana]
gi|51971080|dbj|BAD44232.1| unknown protein [Arabidopsis thaliana]
gi|332010335|gb|AED97718.1| tetratricopeptide repeat (TPR)-containing protein [Arabidopsis
thaliana]
Length = 649
Score = 570 bits (1468), Expect = e-159, Method: Compositional matrix adjust.
Identities = 322/556 (57%), Positives = 406/556 (73%), Gaps = 33/556 (5%)
Query: 8 VPVKSESGTAESSTEDISKTGQASKLFILADLNNNPPETDADANTSPLVSAPELSRLTNE 67
+ VK E T +S + + KL +LADLN NPPETD ++ P+ + P ++RL+NE
Sbjct: 7 IAVKCEPMTVDSPSRPL-------KLVVLADLNFNPPETDDLDSSIPIPTPPPITRLSNE 59
Query: 68 DSNHSSSHHDKGSILMSKEMDVAEVEGKKINKLGKCRSRISSKMDSALEFGVDADGDQSG 127
+S H +G IL KE++ EVE KKI+K+GKCRSR SK++S+ + GVDADGD +
Sbjct: 60 ES------HQEGGILTCKEVEPGEVEAKKISKVGKCRSR--SKIESSSDCGVDADGDLAN 111
Query: 128 LGTSSSSREEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEIL 187
G +S REEK+S+LK GL+HVARKMPKNAHAHF+LGLM+QRLGQ KA+ YEKAEEIL
Sbjct: 112 QGVPAS-REEKISNLKMGLIHVARKMPKNAHAHFILGLMFQRLGQSQKAIPEYEKAEEIL 170
Query: 188 LRCEADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQ 247
L CE +IARPELL LVQIHH QCLL + GD KELE EELEEILSKLK+S++ D RQ
Sbjct: 171 LGCEPEIARPELLLLVQIHHGQCLLLDGFGDTDSVKELEGEELEEILSKLKDSIKLDVRQ 230
Query: 248 AVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQD 307
A VWNTLGL+LLK+G L S+ISVLSSLLA+ P+N DC+ NLG+AY QSGDME SAKCFQD
Sbjct: 231 AAVWNTLGLMLLKAGCLMSAISVLSSLLALVPDNYDCLANLGVAYLQSGDMELSAKCFQD 290
Query: 308 LILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKAD 367
L+LKD NHPAALINYAA LLCK+ S +AGAGAN G A DQ + +NVAKECLLAAL++D
Sbjct: 291 LVLKDHNHPAALINYAAELLCKHSSTVAGAGANGGADASEDQKAPMNVAKECLLAALRSD 350
Query: 368 PKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQEPTE 427
PK+AH W NLAN+YY+ GDHRSS KCLEKAAKL+PNCM+TR+AVAV RIKDAERSQ+ ++
Sbjct: 351 PKSAHAWVNLANSYYMMGDHRSSSKCLEKAAKLDPNCMATRFAVAVQRIKDAERSQDASD 410
Query: 428 QLSWAGNEMASILREGDPVQIEPPIAWAGFAAVQKTHHEVAAAFETEENELSKMEECA-- 485
QLSWAGNEMAS++REG+ V I+PPIAWAG A K HE+AAAF + NEL++MEE A
Sbjct: 411 QLSWAGNEMASVIREGESVPIDPPIAWAGLAMAHKAQHEIAAAFVADRNELTEMEERAVY 470
Query: 486 GAGESAFLDQASAVN---------------VAKECLLAALKADPKAAHIWANLANAYYLT 530
++ D AV ++++ L AA+ + ++ W+NL + L+
Sbjct: 471 SLKQAVTEDPEDAVRWHQLGLHSLCSQQYKLSQKYLKAAVGRSRECSYAWSNLGISLQLS 530
Query: 531 GDHRSSGKCLEKVLMV 546
+H + + ++ L V
Sbjct: 531 DEHSEAEEVYKRALTV 546
>gi|358348985|ref|XP_003638521.1| UDP-N-acetylglucosamine-peptide N-acetylglucosaminyltransferase 110
kDa subunit [Medicago truncatula]
gi|355504456|gb|AES85659.1| UDP-N-acetylglucosamine-peptide N-acetylglucosaminyltransferase 110
kDa subunit [Medicago truncatula]
Length = 652
Score = 556 bits (1432), Expect = e-155, Method: Compositional matrix adjust.
Identities = 294/426 (69%), Positives = 350/426 (82%), Gaps = 9/426 (2%)
Query: 60 ELSRLTNEDSNHSSSHHDKGSILMSKEMDVAEVEGKKINKLGKCRSRISSKMDSALEFGV 119
E++RL N++++ S L+SK+ + E EGK +NKLGKCRS+ SK DS+++ G
Sbjct: 57 EITRLINDENSQDKS-------LLSKDTNSNEGEGKLLNKLGKCRSK-PSKTDSSIDCGA 108
Query: 120 DADGDQSGLGTSSSSREEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSS 179
DADGDQ G + S+REEKVSS+KTGLVHVARKMPKNAHAHF+LGLMYQRL QP KA+ +
Sbjct: 109 DADGDQHVQG-APSAREEKVSSMKTGLVHVARKMPKNAHAHFILGLMYQRLNQPQKAILA 167
Query: 180 YEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKE 239
YEKAEEILLR E +I R E L+LVQIHHAQCL+ ESS +NS D+ELEP ELEEI+SKLKE
Sbjct: 168 YEKAEEILLRPEVEIDRAEFLALVQIHHAQCLIIESSSENSSDQELEPHELEEIISKLKE 227
Query: 240 SMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDME 299
S QSD RQA VWNTLG ILLK+GR+QS+ISVLSSLLA+ P N DC+GNLGIAY Q GD+E
Sbjct: 228 STQSDIRQAAVWNTLGFILLKTGRVQSAISVLSSLLAISPENYDCLGNLGIAYLQIGDLE 287
Query: 300 QSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKEC 359
SAKCFQ+LILKDQNHPAAL+NYAALLLCK SV+AGAGAN EGA +Q+ A NVAKEC
Sbjct: 288 LSAKCFQELILKDQNHPAALVNYAALLLCKNASVVAGAGANAAEGASAEQSMAANVAKEC 347
Query: 360 LLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDA 419
LLAA+KAD K+AHIWANLA A+ +TG+HR S KCLEKAAKLEPNCMSTRYAVA RIK+A
Sbjct: 348 LLAAIKADGKSAHIWANLAYAFSITGNHRISSKCLEKAAKLEPNCMSTRYAVASHRIKEA 407
Query: 420 ERSQEPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFAAVQKTHHEVAAAFETEENELS 479
ERSQ+P+E LS AGNEMASI+R+GD +E PIAWAG A V K HE++AA+E+E++ L
Sbjct: 408 ERSQDPSELLSSAGNEMASIIRDGDSSLVELPIAWAGLAMVHKAQHEISAAYESEQDGLK 467
Query: 480 KMEECA 485
++EECA
Sbjct: 468 EIEECA 473
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/49 (71%), Positives = 42/49 (85%)
Query: 494 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEK 542
+Q+ A NVAKECLLAA+KAD K+AHIWANLA A+ +TG+HR S KCLEK
Sbjct: 336 EQSMAANVAKECLLAAIKADGKSAHIWANLAYAFSITGNHRISSKCLEK 384
>gi|388504348|gb|AFK40240.1| unknown [Medicago truncatula]
Length = 453
Score = 526 bits (1355), Expect = e-146, Method: Compositional matrix adjust.
Identities = 281/397 (70%), Positives = 329/397 (82%), Gaps = 9/397 (2%)
Query: 60 ELSRLTNEDSNHSSSHHDKGSILMSKEMDVAEVEGKKINKLGKCRSRISSKMDSALEFGV 119
E++RL N++++ S L+SK+ + E EGK +NKLGKCRS+ SK DS+++ G
Sbjct: 57 EITRLINDENSQDKS-------LLSKDTNSNEGEGKLLNKLGKCRSK-PSKADSSIDCGA 108
Query: 120 DADGDQSGLGTSSSSREEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSS 179
DADGDQ G + S+REEKVSS+KTGLVHVARKMPKNAHAHF+LGLMYQRL QP KA+ +
Sbjct: 109 DADGDQHVQG-APSAREEKVSSMKTGLVHVARKMPKNAHAHFILGLMYQRLNQPQKAILA 167
Query: 180 YEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKE 239
YEKAEEILLR E +I R E L+LVQIHHAQCL+ ESS +NS D+ELEP ELEEI+SKLKE
Sbjct: 168 YEKAEEILLRPEVEIDRAEFLALVQIHHAQCLIIESSSENSSDQELEPHELEEIISKLKE 227
Query: 240 SMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDME 299
S QSDTRQA VWNTLG ILLK+GR+QS+ISVLSSLLA+ P N DC+GNLGIAY Q GD+E
Sbjct: 228 STQSDTRQAAVWNTLGFILLKTGRVQSAISVLSSLLAISPENYDCLGNLGIAYLQIGDLE 287
Query: 300 QSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKEC 359
SAKCFQ+LILKDQNHPAAL+NYAALLLCK SV+AGAGAN EGA +Q+ A NVAKEC
Sbjct: 288 LSAKCFQELILKDQNHPAALVNYAALLLCKNASVVAGAGANAAEGASAEQSMAANVAKEC 347
Query: 360 LLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDA 419
LLAA+KAD K+AHIWANLA A+ +TG+HR S KCLEKAAKLEPNCMSTRYAVA RIK+A
Sbjct: 348 LLAAIKADGKSAHIWANLAYAFSITGNHRISSKCLEKAAKLEPNCMSTRYAVASHRIKEA 407
Query: 420 ERSQEPTEQLSWAGNEMASILREGDPVQIEPPIAWAG 456
ERSQ+P+E LS AGNEMASI+R+GD +E PIAWAG
Sbjct: 408 ERSQDPSELLSSAGNEMASIIRDGDSSLVELPIAWAG 444
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/49 (71%), Positives = 42/49 (85%)
Query: 494 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEK 542
+Q+ A NVAKECLLAA+KAD K+AHIWANLA A+ +TG+HR S KCLEK
Sbjct: 336 EQSMAANVAKECLLAAIKADGKSAHIWANLAYAFSITGNHRISSKCLEK 384
>gi|217075008|gb|ACJ85864.1| unknown [Medicago truncatula]
Length = 439
Score = 515 bits (1327), Expect = e-143, Method: Compositional matrix adjust.
Identities = 276/392 (70%), Positives = 324/392 (82%), Gaps = 9/392 (2%)
Query: 60 ELSRLTNEDSNHSSSHHDKGSILMSKEMDVAEVEGKKINKLGKCRSRISSKMDSALEFGV 119
E++RL N++++ S L+SK+ + E EGK +NKLGKCRS+ SK DS+++ G
Sbjct: 57 EITRLINDENSQDKS-------LLSKDTNSNEGEGKLLNKLGKCRSK-PSKADSSIDCGA 108
Query: 120 DADGDQSGLGTSSSSREEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSS 179
DADGDQ G + S+REEKVSS+KTGLVHVARKMPKNAHAHF+LGLMYQRL QP KA+ +
Sbjct: 109 DADGDQHVQG-APSAREEKVSSMKTGLVHVARKMPKNAHAHFILGLMYQRLNQPQKAILA 167
Query: 180 YEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKE 239
YEKAEEILLR E +I R E L+LVQIHHAQCL+ ESS +NS D+ELEP ELEEI+SKLKE
Sbjct: 168 YEKAEEILLRPEVEIDRAEFLALVQIHHAQCLIIESSSENSSDQELEPHELEEIISKLKE 227
Query: 240 SMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDME 299
S QSDTRQA VWNTLG ILLK+GR+QS+ISVLSSLLA+ P N DC+GNLGIAY Q GD+E
Sbjct: 228 STQSDTRQAAVWNTLGFILLKTGRVQSAISVLSSLLAISPENYDCLGNLGIAYLQIGDLE 287
Query: 300 QSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKEC 359
SAKCFQ+LILKDQNHPAAL+NYAALLLCK SV+AGAGAN EGA +Q+ A NVAKEC
Sbjct: 288 LSAKCFQELILKDQNHPAALVNYAALLLCKNASVVAGAGANAAEGASAEQSMAANVAKEC 347
Query: 360 LLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDA 419
LLAA+KAD K+AHIWANLA A+ +TG+HR S KCLEKAAKLEPNCMSTRYAVA RIK+A
Sbjct: 348 LLAAIKADGKSAHIWANLAYAFSITGNHRISSKCLEKAAKLEPNCMSTRYAVASHRIKEA 407
Query: 420 ERSQEPTEQLSWAGNEMASILREGDPVQIEPP 451
ERSQ+P+E LS AGNEMASI+R+GD +E P
Sbjct: 408 ERSQDPSELLSSAGNEMASIIRDGDSSLVELP 439
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/49 (71%), Positives = 42/49 (85%)
Query: 494 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEK 542
+Q+ A NVAKECLLAA+KAD K+AHIWANLA A+ +TG+HR S KCLEK
Sbjct: 336 EQSMAANVAKECLLAAIKADGKSAHIWANLAYAFSITGNHRISSKCLEK 384
>gi|115441709|ref|NP_001045134.1| Os01g0906600 [Oryza sativa Japonica Group]
gi|56785099|dbj|BAD82737.1| unknown protein [Oryza sativa Japonica Group]
gi|113534665|dbj|BAF07048.1| Os01g0906600 [Oryza sativa Japonica Group]
gi|215704783|dbj|BAG94811.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218189568|gb|EEC71995.1| hypothetical protein OsI_04846 [Oryza sativa Indica Group]
Length = 599
Score = 488 bits (1255), Expect = e-135, Method: Compositional matrix adjust.
Identities = 268/544 (49%), Positives = 351/544 (64%), Gaps = 61/544 (11%)
Query: 35 ILADLNNNPPETDADANTSPLVSAPELSRLTNE-------DSNHSSSHHDKGS----ILM 83
+LADLN +PPE+D + + DS+ SS+ D+GS ++
Sbjct: 1 MLADLNVDPPESDGEDQPPTPNPNVNPATAAVTAATVVAIDSSTRSSN-DEGSLAKSVIT 59
Query: 84 SKEMDVAEVEGKKINKLGKCRSRISSKMDSALEFGVDADGDQSGLGTSSSSREEKVSSLK 143
+KE D E E D DQ G +S +REEKVS+LK
Sbjct: 60 TKEPDTVECE----------------------------DADQHCQG-ASVAREEKVSNLK 90
Query: 144 TGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLV 203
LVHVARKMPKNAHAHF+LGLMYQRLGQP KA+++YEK+ EILL+ E ++ RP+LLS V
Sbjct: 91 AALVHVARKMPKNAHAHFMLGLMYQRLGQPQKAIAAYEKSSEILLQDEEEVRRPDLLSSV 150
Query: 204 QIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGR 263
+IHHAQC+L S GD + D+ELE EL+EIL K+K S++SD RQA VWN LGL+LL+SG+
Sbjct: 151 RIHHAQCILQTSMGD-TFDEELESGELDEILVKMKSSVESDPRQAAVWNILGLVLLRSGQ 209
Query: 264 LQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYA 323
LQS+ISVLSSL V P+ D + NLG+AY QSG++E + KCFQ+L++KDQNHPAAL+NYA
Sbjct: 210 LQSAISVLSSLTVVAPDYLDSLANLGVAYIQSGNLELATKCFQELVIKDQNHPAALVNYA 269
Query: 324 ALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYL 383
ALLLCKYGS AG+G N G+CL Q + VAKECLLAA+KADPKAA +W NLANAYY+
Sbjct: 270 ALLLCKYGSFAAGSGGNVSAGSCLHQKEGLAVAKECLLAAVKADPKAASVWVNLANAYYM 329
Query: 384 TGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQEPTEQLSWAGNEMASILREG 443
G+HR+S +CLE+AAK EP+ M RYA+AV RI+DA RSQ +QL WA NEMA++L+EG
Sbjct: 330 AGEHRNSKRCLEQAAKHEPSHMPARYAIAVHRIRDAVRSQCSDDQLLWASNEMATVLKEG 389
Query: 444 DPVQIEPPIAWAGFAAVQKTHHEVAAAFETEENELSKMEECA----------GAGESAFL 493
DP ++ PIAWAG A + HE+AAA++TE+ LS +EE A ++
Sbjct: 390 DPSAVDAPIAWAGLAMAHRAQHEIAAAYDTEQINLSDVEERALYTLKQAIQEDPDDAVQW 449
Query: 494 DQASAVNVAK-------ECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKVLMV 546
Q N+ L AA+ P +++W+NL A L+ D SS + + K ++
Sbjct: 450 HQLGLYNICTTQFSRSVNFLKAAVARSPDCSYVWSNLGIALQLSDD--SSCETVYKRALI 507
Query: 547 YCSS 550
SS
Sbjct: 508 LSSS 511
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 70/172 (40%), Gaps = 20/172 (11%)
Query: 231 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 290
E L LK+++Q D AV W+ LGL + + + S++ L + +A P+ NLGI
Sbjct: 429 ERALYTLKQAIQEDPDDAVQWHQLGLYNICTTQFSRSVNFLKAAVARSPDCSYVWSNLGI 488
Query: 291 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQA 350
A S D + LIL A+++ +L ++G
Sbjct: 489 ALQLSDDSSCETVYKRALILSSSQQSYAILSNLGILYRQHGR------------------ 530
Query: 351 SAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 402
+A+ LL +L+ P A NL G + + C EK+ + +P
Sbjct: 531 --YELARRMLLRSLELCPGHAPANNNLGLVSIAEGRYEEAISCFEKSLQSDP 580
>gi|222619718|gb|EEE55850.1| hypothetical protein OsJ_04469 [Oryza sativa Japonica Group]
Length = 618
Score = 483 bits (1243), Expect = e-133, Method: Compositional matrix adjust.
Identities = 260/517 (50%), Positives = 338/517 (65%), Gaps = 59/517 (11%)
Query: 35 ILADLNNNPPETDADANTSPLVSAPELSRLTNE-------DSNHSSSHHDKGS----ILM 83
+LADLN +PPE+D + + DS+ SS+ D+GS ++
Sbjct: 1 MLADLNVDPPESDGEDQPPTPNPNVNPATAAVTAATVVAIDSSTRSSN-DEGSLAKSVIT 59
Query: 84 SKEMDVAEVEGKKINKLGKCRSRISSKMDSALEFGVDADGDQSGLGTSSSSREEKVSSLK 143
+KE D E E D DQ G +S +REEKVS+LK
Sbjct: 60 TKEPDTVECE----------------------------DADQHCQG-ASVAREEKVSNLK 90
Query: 144 TGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLV 203
LVHVARKMPKNAHAHF+LGLMYQRLGQP KA+++YEK+ EILL+ E ++ RP+LLS V
Sbjct: 91 AALVHVARKMPKNAHAHFMLGLMYQRLGQPQKAIAAYEKSSEILLQDEEEVRRPDLLSSV 150
Query: 204 QIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGR 263
+IHHAQC+L S GD + D+ELE EL+EIL K+K S++SD RQA VWN LGL+LL+SG+
Sbjct: 151 RIHHAQCILQTSMGD-TFDEELESGELDEILVKMKSSVESDPRQAAVWNILGLVLLRSGQ 209
Query: 264 LQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYA 323
LQS+ISVLSSL V P+ D + NLG+AY QSG++E + KCFQ+L++KDQNHPAAL+NYA
Sbjct: 210 LQSAISVLSSLTVVAPDYLDSLANLGVAYIQSGNLELATKCFQELVIKDQNHPAALVNYA 269
Query: 324 ALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYL 383
ALLLCKYGS AG+G N G+CL Q + VAKECLLAA+KADPKAA +W NLANAYY+
Sbjct: 270 ALLLCKYGSFAAGSGGNVSAGSCLHQKEGLAVAKECLLAAVKADPKAASVWVNLANAYYM 329
Query: 384 TGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQEPTEQLSWAGNEMASILREG 443
G+HR+S +CLE+AAK EP+ M RYA+AV RI+DA RSQ +QL WA NEMA++L+EG
Sbjct: 330 AGEHRNSKRCLEQAAKHEPSHMPARYAIAVHRIRDAVRSQCSDDQLLWASNEMATVLKEG 389
Query: 444 DPVQIEPPIAWAGFAAVQKTHHEVAAAFETEENELSKMEECA----------GAGESAFL 493
DP ++ PIAWAG A + HE+AAA++TE+ LS +EE A ++
Sbjct: 390 DPSAVDAPIAWAGLAMAHRAQHEIAAAYDTEQINLSDVEERALYTLKQAIQEDPDDAVQW 449
Query: 494 DQASAVNVAK-------ECLLAALKADPKAAHIWANL 523
Q N+ L AA+ P +++W+NL
Sbjct: 450 HQLGLYNICTTQFSRSVNFLKAAVARSPDCSYVWSNL 486
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/50 (66%), Positives = 41/50 (82%)
Query: 493 LDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEK 542
L Q + VAKECLLAA+KADPKAA +W NLANAYY+ G+HR+S +CLE+
Sbjct: 293 LHQKEGLAVAKECLLAAVKADPKAASVWVNLANAYYMAGEHRNSKRCLEQ 342
>gi|15146191|gb|AAK83579.1| AT5g63200/MDC12_17 [Arabidopsis thaliana]
gi|27764942|gb|AAO23592.1| At5g63200/MDC12_17 [Arabidopsis thaliana]
Length = 523
Score = 477 bits (1227), Expect = e-132, Method: Compositional matrix adjust.
Identities = 259/419 (61%), Positives = 317/419 (75%), Gaps = 17/419 (4%)
Query: 145 GLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQ 204
GL+HVARKMPKNAHAHF+LGLM+QRLGQ KA+ YEKAEEILL CE +IARPELL LVQ
Sbjct: 2 GLIHVARKMPKNAHAHFILGLMFQRLGQSQKAIPEYEKAEEILLGCEPEIARPELLLLVQ 61
Query: 205 IHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRL 264
IHH QCLL + GD KELE EELEEILSKLK+S++ D RQA VWNTLGL+LLK+G L
Sbjct: 62 IHHGQCLLLDGFGDTDSVKELEGEELEEILSKLKDSIKLDVRQAAVWNTLGLMLLKAGCL 121
Query: 265 QSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAA 324
S+ISVLSSLLA+ P+N DC+ NLG+AY QSGDME SAKCFQDL+LKD NHPAALINYAA
Sbjct: 122 MSAISVLSSLLALVPDNYDCLANLGVAYLQSGDMELSAKCFQDLVLKDHNHPAALINYAA 181
Query: 325 LLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLT 384
LLCK+ S +AGAGAN G A DQ + +NVAKECLLAAL++DPK+AH W NLAN+YY+
Sbjct: 182 ELLCKHSSTVAGAGANGGADASEDQKAPMNVAKECLLAALRSDPKSAHAWVNLANSYYMM 241
Query: 385 GDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQEPTEQLSWAGNEMASILREGD 444
GDHRSS KCLEKAAKL+PNCM+TR+AVAV RIKDAERSQ+ ++QLSWAGNEMAS++REG+
Sbjct: 242 GDHRSSSKCLEKAAKLDPNCMATRFAVAVQRIKDAERSQDASDQLSWAGNEMASVIREGE 301
Query: 445 PVQIEPPIAWAGFAAVQKTHHEVAAAFETEENELSKMEECA--GAGESAFLDQASAVN-- 500
V I+PPIAWAG A K HE+AAAF + NEL++MEE A ++ D AV
Sbjct: 302 SVPIDPPIAWAGLAMAHKAQHEIAAAFVADRNELTEMEERAVYSLKQAVTEDPEDAVRWH 361
Query: 501 -------------VAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKVLMV 546
++++ L AA+ + ++ W+NL + L+ +H + + ++ L V
Sbjct: 362 QLGLHSLCSQQYKLSQKYLKAAVGRSRECSYAWSNLGISLQLSDEHSEAEEVYKRALTV 420
>gi|242059603|ref|XP_002458947.1| hypothetical protein SORBIDRAFT_03g043170 [Sorghum bicolor]
gi|241930922|gb|EES04067.1| hypothetical protein SORBIDRAFT_03g043170 [Sorghum bicolor]
Length = 612
Score = 474 bits (1221), Expect = e-131, Method: Compositional matrix adjust.
Identities = 261/526 (49%), Positives = 337/526 (64%), Gaps = 58/526 (11%)
Query: 35 ILADLNNNPPETDAD--------ANTSPLVSAPELSRLTNEDSNHSSSHHDKG---SILM 83
+LADLN P E+D + + A + DS S + + G +++
Sbjct: 13 MLADLNFEPAESDGEDRPPTPTPNPAATAAVAVAAAPAVTTDSFTRSGNEEGGLMKNVIA 72
Query: 84 SKEMDVAEVEGKKINKLGKCRSRISSKMDSALEFGVDADGDQSGLGTSSSSREEKVSSLK 143
+K+ D E E D DQ G +S+ REEKVS+LK
Sbjct: 73 TKDTDTVECE----------------------------DADQHCQG-ASAPREEKVSNLK 103
Query: 144 TGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLV 203
LVHVARKMPKNAHAHF+LGLMYQRLGQ KA++SYEK+ EILL+ E ++ RP+LLS V
Sbjct: 104 AALVHVARKMPKNAHAHFMLGLMYQRLGQAQKAIASYEKSTEILLQDEEEVRRPDLLSSV 163
Query: 204 QIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGR 263
+IHHAQC+L S GD S D+ELE E+++IL+KLK S++SD RQA VWN LGL+LL+ G+
Sbjct: 164 RIHHAQCILQASMGD-SFDEELETGEVDDILAKLKSSVESDHRQAAVWNILGLVLLRGGQ 222
Query: 264 LQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYA 323
+QS+ISVLSSL AV P+ D + NLG+AY QSGD+E SAKCFQ+L+LKDQNHPAAL+NYA
Sbjct: 223 IQSAISVLSSLTAVAPDYLDSLANLGVAYIQSGDLEMSAKCFQELLLKDQNHPAALVNYA 282
Query: 324 ALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYL 383
LLLC+YGS+ AGAG N G L Q A+ VAKECLLAA+KADP+AA +W NLANAYY+
Sbjct: 283 VLLLCRYGSLSAGAGGNVSTGPYLHQKEALVVAKECLLAAVKADPRAASVWVNLANAYYM 342
Query: 384 TGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQEPTEQLSWAGNEMASILREG 443
G+HR+S +CLE+AAKLEPN M RYA+AV RI+DA RSQ +QL WA NEMA++L+EG
Sbjct: 343 DGEHRNSKRCLEQAAKLEPNHMPARYAIAVHRIRDAVRSQCSDDQLLWAANEMATVLKEG 402
Query: 444 DPVQIEPPIAWAGFAAVQKTHHEVAAAFETEENELSKMEECA----------GAGESAFL 493
DP ++ PIAWAG A + HE+AAA++ E L+ EE A ++
Sbjct: 403 DPSAVDAPIAWAGLAMAHRAQHEIAAAYDNENINLNDAEERAQYTLKQAIQEDPDDAVQW 462
Query: 494 DQASAVNV-------AKECLLAALKADPKAAHIWANLANAYYLTGD 532
Q N+ + L AAL P ++ W+NL A L+ D
Sbjct: 463 HQLGLYNICMTRFSRSVNFLKAALARSPDCSYAWSNLGIALQLSDD 508
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 37/62 (59%), Positives = 48/62 (77%), Gaps = 4/62 (6%)
Query: 485 AGAGESA----FLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCL 540
AGAG + +L Q A+ VAKECLLAA+KADP+AA +W NLANAYY+ G+HR+S +CL
Sbjct: 294 AGAGGNVSTGPYLHQKEALVVAKECLLAAVKADPRAASVWVNLANAYYMDGEHRNSKRCL 353
Query: 541 EK 542
E+
Sbjct: 354 EQ 355
>gi|308080217|ref|NP_001183500.1| uncharacterized protein LOC100501933 [Zea mays]
gi|238011876|gb|ACR36973.1| unknown [Zea mays]
gi|414879127|tpg|DAA56258.1| TPA: hypothetical protein ZEAMMB73_120592 [Zea mays]
Length = 610
Score = 470 bits (1210), Expect = e-130, Method: Compositional matrix adjust.
Identities = 242/428 (56%), Positives = 306/428 (71%), Gaps = 19/428 (4%)
Query: 122 DGDQSGLGTSSSSREEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYE 181
D DQ G +S+ REEKVS+LK LVHVARKMPKNAHAHF+LGLMYQRLGQ KA++SYE
Sbjct: 81 DVDQHCQG-ASAPREEKVSNLKAALVHVARKMPKNAHAHFMLGLMYQRLGQAQKAIASYE 139
Query: 182 KAEEILLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESM 241
K+ EILL+ E ++ RP+LLS V+IHHAQC+L S GD S D+ELE EL++ILSKLK S+
Sbjct: 140 KSTEILLQDEEEVRRPDLLSSVRIHHAQCILQASMGD-SFDEELETGELDDILSKLKSSV 198
Query: 242 QSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQS 301
+ D RQA VWN LGL+LL+ G++QS+ISVLSSL AV P+ D + NLG+AY QSG +E S
Sbjct: 199 ELDHRQAAVWNILGLVLLRGGQIQSAISVLSSLTAVAPDYLDSLANLGVAYIQSGKLELS 258
Query: 302 AKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLL 361
AKCFQ+L+LKDQNHPAAL+NYA LLLC+YGS+ AGAG N G + Q A+ VAKECLL
Sbjct: 259 AKCFQELLLKDQNHPAALVNYAVLLLCRYGSLSAGAGGNVSTGPYVHQKEALVVAKECLL 318
Query: 362 AALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAER 421
AA+KADP+AA +W NLANAYY+ G+H++S +CLE+AAKLEPN M RYA+AV RI+DA R
Sbjct: 319 AAVKADPRAASVWVNLANAYYMDGEHKNSKRCLEQAAKLEPNHMPARYAIAVHRIRDAVR 378
Query: 422 SQEPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFAAVQKTHHEVAAAFETEENELSKM 481
SQ +QL WA NEMA++L+EGDP ++ PIAWAG A + HE+AA ++TE L+
Sbjct: 379 SQCSDDQLLWAANEMATVLKEGDPSAVDAPIAWAGLAMAHRAQHEIAAIYDTENINLNDA 438
Query: 482 EECA----------GAGESAFLDQASAVNV-------AKECLLAALKADPKAAHIWANLA 524
EE A ++ Q N+ + L AAL P ++ W+NL
Sbjct: 439 EERAQYTLKQAIQEDPDDAVQWHQLGLYNICMTRFSRSVNFLKAALARSPDCSYAWSNLG 498
Query: 525 NAYYLTGD 532
A L+ D
Sbjct: 499 IALQLSDD 506
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/62 (56%), Positives = 48/62 (77%), Gaps = 4/62 (6%)
Query: 485 AGAGESA----FLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCL 540
AGAG + ++ Q A+ VAKECLLAA+KADP+AA +W NLANAYY+ G+H++S +CL
Sbjct: 292 AGAGGNVSTGPYVHQKEALVVAKECLLAAVKADPRAASVWVNLANAYYMDGEHKNSKRCL 351
Query: 541 EK 542
E+
Sbjct: 352 EQ 353
Score = 40.0 bits (92), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 64/166 (38%), Gaps = 20/166 (12%)
Query: 237 LKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSG 296
LK+++Q D AV W+ LGL + R S++ L + LA P+ NLGIA S
Sbjct: 446 LKQAIQEDPDDAVQWHQLGLYNICMTRFSRSVNFLKAALARSPDCSYAWSNLGIALQLSD 505
Query: 297 DMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVA 356
D P++ Y L+ L +N G Q A
Sbjct: 506 D------------------PSSETVYKRALVLSSTQQLHAIFSNL--GILYRQHRNYEFA 545
Query: 357 KECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 402
++ LL +L+ P A NL + G + EKA + +P
Sbjct: 546 RKMLLRSLELCPGFAPASNNLGLVFVAEGRWEDAKSWFEKALQSDP 591
>gi|20804879|dbj|BAB92560.1| P0497A05.3 [Oryza sativa Japonica Group]
Length = 606
Score = 470 bits (1209), Expect = e-130, Method: Compositional matrix adjust.
Identities = 264/552 (47%), Positives = 350/552 (63%), Gaps = 68/552 (12%)
Query: 35 ILADLNNNPPETDADANTSPLVSAPELSRLTNE-------DSNHSSSHHDKGS----ILM 83
+LADLN +PPE+D + + DS+ SS+ D+GS ++
Sbjct: 1 MLADLNVDPPESDGEDQPPTPNPNVNPATAAVTAATVVAIDSSTRSSN-DEGSLAKSVIT 59
Query: 84 SKEMDVAEVEGKKINKLGKCRSRISSKMDSALEFGVDADGDQSGLGTSSSSREEKVSSLK 143
+KE D E E D DQ G +S +REEKVS+LK
Sbjct: 60 TKEPDTVECE----------------------------DADQHCQG-ASVAREEKVSNLK 90
Query: 144 TGLVHVARKMPKNAHAHFLLGLMYQRLGQ----PLKAVSSYEKAEEILLRCEADIARPEL 199
LVHVARKMPKNAHAHF+LGLMYQRL Q +A+++YEK+ EILL+ E ++ RP+L
Sbjct: 91 AALVHVARKMPKNAHAHFMLGLMYQRLAQLAAEIFQAIAAYEKSSEILLQDEEEVRRPDL 150
Query: 200 LSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILL 259
LS V+IHHAQC+L S GD + D+ELE EL+EIL K+K S++SD RQA VWN LGL+LL
Sbjct: 151 LSSVRIHHAQCILQTSMGD-TFDEELESGELDEILVKMKSSVESDPRQAAVWNILGLVLL 209
Query: 260 KSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAY---FQSGDMEQSAKCFQDLILKDQNHP 316
+SG+LQS+ISVLSSL V P+ D + NLG+AY F+ G++E + KCFQ+L++KDQNHP
Sbjct: 210 RSGQLQSAISVLSSLTVVAPDYLDSLANLGVAYIQRFERGNLELATKCFQELVIKDQNHP 269
Query: 317 AALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWAN 376
AAL+NYAALLLCKYGS AG+G N G+CL Q + VAKECLLAA+KADPKAA +W N
Sbjct: 270 AALVNYAALLLCKYGSFAAGSGGNVSAGSCLHQKEGLAVAKECLLAAVKADPKAASVWVN 329
Query: 377 LANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQEPTEQLSWAGNEM 436
LANAYY+ G+HR+S +CLE+AAK EP+ M RYA+AV RI+DA RSQ +QL WA NEM
Sbjct: 330 LANAYYMAGEHRNSKRCLEQAAKHEPSHMPARYAIAVHRIRDAVRSQCSDDQLLWASNEM 389
Query: 437 ASILREGDPVQIEPPIAWAGFAAVQKTHHEVAAAFETEENELSKMEECA----------G 486
A++L+EGDP ++ PIAWAG A + HE+AAA++TE+ LS +EE A
Sbjct: 390 ATVLKEGDPSAVDAPIAWAGLAMAHRAQHEIAAAYDTEQINLSDVEERALYTLKQAIQED 449
Query: 487 AGESAFLDQASAVNV-------AKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKC 539
++ Q N+ + L AA+ P +++W+NL A L+ D SS +
Sbjct: 450 PDDAVQWHQLGLYNICTTQFSRSVNFLKAAVARSPDCSYVWSNLGIALQLSDD--SSCET 507
Query: 540 LEKVLMVYCSSN 551
+ K ++ SS
Sbjct: 508 VYKRALILSSSQ 519
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 70/172 (40%), Gaps = 20/172 (11%)
Query: 231 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 290
E L LK+++Q D AV W+ LGL + + + S++ L + +A P+ NLGI
Sbjct: 436 ERALYTLKQAIQEDPDDAVQWHQLGLYNICTTQFSRSVNFLKAAVARSPDCSYVWSNLGI 495
Query: 291 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQA 350
A S D + LIL A+++ +L ++G
Sbjct: 496 ALQLSDDSSCETVYKRALILSSSQQSYAILSNLGILYRQHGR------------------ 537
Query: 351 SAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 402
+A+ LL +L+ P A NL G + + C EK+ + +P
Sbjct: 538 --YELARRMLLRSLELCPGHAPANNNLGLVSIAEGRYEEAISCFEKSLQSDP 587
>gi|357126398|ref|XP_003564874.1| PREDICTED: probable UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase SPINDLY-like
[Brachypodium distachyon]
Length = 612
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 237/452 (52%), Positives = 314/452 (69%), Gaps = 20/452 (4%)
Query: 32 KLFILADLNNNPPETDADANTSPLVSAPELSRLTNEDSNHSSSHHDKGSILMSKEMDVAE 91
+ +LADLN +PPE+D + + P P + + S
Sbjct: 11 RAMMLADLNVDPPESDGEDD--PPTPKPNPAIAAAVAVAAAVPVVAGDS-----STRYVF 63
Query: 92 VEGKKINKLGKCRSRISSKMDSALEFGVDADGDQSGLGTSSSSREEKVSSLKTGLVHVAR 151
+EG G ++ I++K A+E D +Q G +S SREEKVS+LK LVHVAR
Sbjct: 64 IEG------GLPKNIIATKDPDAVEC---EDAEQHCQG-ASVSREEKVSNLKAALVHVAR 113
Query: 152 KMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCL 211
KMPKNAHAHF+LGLMYQRLGQP KA+ +YEK+ EILL+ E ++ RP+LLS V+IHHAQC+
Sbjct: 114 KMPKNAHAHFMLGLMYQRLGQPQKAIIAYEKSSEILLQDEQEVRRPDLLSSVRIHHAQCI 173
Query: 212 LPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVL 271
L S GD S D+EL+ ELE+IL KLK S++ D RQA VWN LGL+LL+ +LQS+ISV
Sbjct: 174 LQASMGD-SFDEELDASELEDILVKLKSSVELDPRQAAVWNILGLVLLRGSQLQSAISVF 232
Query: 272 SSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYG 331
S+L V P+ D + NLG+AY QSG++E ++KCFQ+L+LKDQNHPAAL+NY ALLLCKYG
Sbjct: 233 STLRTVAPDYLDSLANLGVAYIQSGNLELASKCFQELVLKDQNHPAALVNYGALLLCKYG 292
Query: 332 SVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSG 391
S+ AGAG G+ L Q + VAKECLLAA+++DPKAA +W NLANAY++ G+HR+S
Sbjct: 293 SLAAGAGDTVSAGSYLHQKEGLVVAKECLLAAVRSDPKAASVWVNLANAYHMAGEHRNSK 352
Query: 392 KCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQEPTEQLSWAGNEMASILREGDPVQIEPP 451
+CLE+AAK EPN M RYA+AV RI++A RSQ +QL WA NEM+++++EGDPV + P
Sbjct: 353 RCLEQAAKFEPNHMPARYAIAVHRIREAVRSQCSDDQLLWAANEMSTVVKEGDPVDV--P 410
Query: 452 IAWAGFAAVQKTHHEVAAAFETEENELSKMEE 483
IAWAG A + HE+AAA++ E+ L++ EE
Sbjct: 411 IAWAGLAMAHRAQHEIAAAYDVEQISLNEAEE 442
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 49/62 (79%), Gaps = 4/62 (6%)
Query: 485 AGAGES----AFLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCL 540
AGAG++ ++L Q + VAKECLLAA+++DPKAA +W NLANAY++ G+HR+S +CL
Sbjct: 296 AGAGDTVSAGSYLHQKEGLVVAKECLLAAVRSDPKAASVWVNLANAYHMAGEHRNSKRCL 355
Query: 541 EK 542
E+
Sbjct: 356 EQ 357
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 45/96 (46%)
Query: 231 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 290
E L LK+++Q D AV W+ LGL + + + S++ L + +A P+ NLGI
Sbjct: 442 ERTLYTLKQAIQEDPDDAVQWHQLGLYNMCTTQFSRSVNFLKAAIARFPDCSYAWSNLGI 501
Query: 291 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL 326
A S D + L+L A+++ +L
Sbjct: 502 ALQLSDDPSSETVYKRALVLSSSQQSHAILSNLGIL 537
>gi|326508792|dbj|BAJ95918.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 617
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 233/442 (52%), Positives = 303/442 (68%), Gaps = 28/442 (6%)
Query: 131 SSSSREEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRC 190
+S SREEKVSSLK LV+VARKMPKNAHAHF+LGLMYQRLGQP KA+ +Y+K+ EILL+
Sbjct: 96 ASVSREEKVSSLKAALVNVARKMPKNAHAHFMLGLMYQRLGQPQKAIIAYDKSSEILLQD 155
Query: 191 EADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVV 250
E ++ RP+LLS V+IHHAQC+L S GD S D+EL+ EL EIL KLK S++ D RQA V
Sbjct: 156 EQEVRRPDLLSSVRIHHAQCILQASMGD-SFDEELDTSELSEILVKLKSSVELDPRQAAV 214
Query: 251 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 310
WN LGL+LL+ G+LQS+ISV S+L V P+ D + NLG+AY QSGD+E S KCFQ+L+L
Sbjct: 215 WNILGLVLLRGGQLQSAISVFSTLTTVAPDYLDSLANLGVAYIQSGDLELSTKCFQELVL 274
Query: 311 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 370
KDQ+HPAAL+NY ALLLCKYGS+ AGA G+ L Q A+ AKECLLAA+++DPKA
Sbjct: 275 KDQSHPAALMNYGALLLCKYGSLAAGASGAVSAGSYLRQKEALVAAKECLLAAVRSDPKA 334
Query: 371 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQEPTEQLS 430
A +W NLANAY+++G+HR+S +CLE+AAK EPN M RYA+AV RI+DA RSQ +QL
Sbjct: 335 ASVWVNLANAYHMSGEHRNSKRCLEQAAKFEPNHMPARYAIAVHRIRDAVRSQCSDDQLI 394
Query: 431 WAGNEMASILREGDPVQIEPPIAWAGFAAVQKTHHEVAAAFETEENELSKMEECA----- 485
WA +EMA++L+EGD ++ P+AWAG A + HE+AAA++ E+ L + EE A
Sbjct: 395 WAASEMATVLKEGDTSVVDLPVAWAGLAMAHRAQHEIAAAYDGEQAILIEAEERALYTLK 454
Query: 486 ----------------GAGESAFLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYL 529
G + +VN K AA+ P+ + W+NL A L
Sbjct: 455 QAIQEDPDDAVQWHQLGLYNMCTTQFSRSVNFLK----AAIARSPECCYAWSNLGIALQL 510
Query: 530 TGDHRSSGKCLEKVLMVYCSSN 551
+ D S + + K +V SS
Sbjct: 511 SND--PSSETVYKRALVLSSSQ 530
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 45/96 (46%)
Query: 231 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 290
E L LK+++Q D AV W+ LGL + + + S++ L + +A P C NLGI
Sbjct: 447 ERALYTLKQAIQEDPDDAVQWHQLGLYNMCTTQFSRSVNFLKAAIARSPECCYAWSNLGI 506
Query: 291 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL 326
A S D + L+L A+++ +L
Sbjct: 507 ALQLSNDPSSETVYKRALVLSSSQQSYAILSNIGIL 542
>gi|10177301|dbj|BAB10562.1| unnamed protein product [Arabidopsis thaliana]
Length = 404
Score = 433 bits (1114), Expect = e-118, Method: Compositional matrix adjust.
Identities = 248/390 (63%), Positives = 300/390 (76%), Gaps = 16/390 (4%)
Query: 8 VPVKSESGTAESSTEDISKTGQASKLFILADLNNNPPETDADANTSPLVSAPELSRLTNE 67
+ VK E T +S + + KL +LADLN NPPETD ++ P+ + P ++RL+NE
Sbjct: 7 IAVKCEPMTVDSPSRPL-------KLVVLADLNFNPPETDDLDSSIPIPTPPPITRLSNE 59
Query: 68 DSNHSSSHHDKGSILMSKEMDVAEVEGKKINKLGKCRSRISSKMDSALEFGVDADGDQSG 127
+S H +G IL KE++ EVE KKI+K+GKCRSR SK++S+ + GVDADGD +
Sbjct: 60 ES------HQEGGILTCKEVEPGEVEAKKISKVGKCRSR--SKIESSSDCGVDADGDLAN 111
Query: 128 LGTSSSSREEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEIL 187
G +S REEK+S+LK GL+HVARKMPKNAHAHF+LGLM+QRLGQ KA+ YEKAEEIL
Sbjct: 112 QGVPAS-REEKISNLKMGLIHVARKMPKNAHAHFILGLMFQRLGQSQKAIPEYEKAEEIL 170
Query: 188 LRCEADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQ 247
L CE +IARPELL LVQIHH QCLL + GD KELE EELEEILSKLK+S++ D RQ
Sbjct: 171 LGCEPEIARPELLLLVQIHHGQCLLLDGFGDTDSVKELEGEELEEILSKLKDSIKLDVRQ 230
Query: 248 AVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQD 307
A VWNTLGL+LLK+G L S+ISVLSSLLA+ P+N DC+ NLG+AY QSGDME SAKCFQD
Sbjct: 231 AAVWNTLGLMLLKAGCLMSAISVLSSLLALVPDNYDCLANLGVAYLQSGDMELSAKCFQD 290
Query: 308 LILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKAD 367
L+LKD NHPAALINYAA LLCK+ S +AGAGAN G A DQ + +NVAKECLLAAL++D
Sbjct: 291 LVLKDHNHPAALINYAAELLCKHSSTVAGAGANGGADASEDQKAPMNVAKECLLAALRSD 350
Query: 368 PKAAHIWANLANAYYLTGDHRSSGKCLEKA 397
PK+AH W NLAN+YY+ GDHRSS KCLEK
Sbjct: 351 PKSAHAWVNLANSYYMMGDHRSSSKCLEKV 380
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 38/54 (70%), Positives = 47/54 (87%)
Query: 494 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKVLMVY 547
DQ + +NVAKECLLAAL++DPK+AH W NLAN+YY+ GDHRSS KCLEKVL+ +
Sbjct: 331 DQKAPMNVAKECLLAALRSDPKSAHAWVNLANSYYMMGDHRSSSKCLEKVLLAH 384
>gi|302761724|ref|XP_002964284.1| hypothetical protein SELMODRAFT_438952 [Selaginella moellendorffii]
gi|302766761|ref|XP_002966801.1| hypothetical protein SELMODRAFT_439727 [Selaginella moellendorffii]
gi|300166221|gb|EFJ32828.1| hypothetical protein SELMODRAFT_439727 [Selaginella moellendorffii]
gi|300168013|gb|EFJ34617.1| hypothetical protein SELMODRAFT_438952 [Selaginella moellendorffii]
Length = 707
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 216/446 (48%), Positives = 287/446 (64%), Gaps = 30/446 (6%)
Query: 85 KEMDVAEVEGKKINKLGKCRSRISSKMDSALEFGVDADGDQSGLGTSSSSREEKVSSLKT 144
KE A+ EGKK K K RS+ SK E GVD GD G + +EEK+ SLK
Sbjct: 137 KEDSPADEEGKKSGKTFKSRSK--SKWS---ESGVD--GDLEYPGNVQNVKEEKIKSLKA 189
Query: 145 GLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADI---ARPELLS 201
GLVHV+RK+PKNAHAHF+LGLMYQR QPLKA+ ++E+A+EIL + + D+ R +LL+
Sbjct: 190 GLVHVSRKLPKNAHAHFVLGLMYQRSDQPLKAIPAFERAQEILKQADDDLCRQGRAQLLA 249
Query: 202 LVQIHHAQCLLP-ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLK 260
LVQ HHAQCLL + G S K+ E + I SK+KE++ D+ QA +WNTLGL+LL
Sbjct: 250 LVQNHHAQCLLQGKIGGQISPGKDFSKENMRLIGSKVKEAVPEDSGQASIWNTLGLLLLH 309
Query: 261 SGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALI 320
+GR+QS+ISV +SLL++ P++ D + NLG+AYFQSG+++ +A+C Q ++ KD HP ALI
Sbjct: 310 TGRIQSAISVFTSLLSILPDSLDALANLGVAYFQSGELDNAARCLQSVLEKDVYHPGALI 369
Query: 321 NYAALLLCKYGSVL--AGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLA 378
NY A+L+ ++GS L AGAGA+ GA Q A + A L +LK DPKA W NLA
Sbjct: 370 NYGAILVRQHGSFLPGAGAGASKETGAYATQLKAAHAACLYLQTSLKEDPKAGSAWVNLA 429
Query: 379 NAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQEPTEQLSWAGNEMAS 438
AY + GD ++ KCLE+A++LEP+ ++TRYAVA RIKDAERS +P+EQ+SWA NEMAS
Sbjct: 430 AAYEVLGDFTNASKCLEQASRLEPHRLATRYAVAAHRIKDAERSDDPSEQMSWAANEMAS 489
Query: 439 ILREGDPVQIEPPIAWAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASA 498
ILREGDP P +AWAG A V + HE AA+F+ +D
Sbjct: 490 ILREGDPGTFHPHLAWAGLAMVNRAQHESAASFDR-----------------GVMDSKDV 532
Query: 499 VNVAKECLLAALKADPKAAHIWANLA 524
A L A++ DP+ A W L
Sbjct: 533 EERAVHTLQQAIEEDPEDALKWHQLG 558
Score = 46.6 bits (109), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 35/62 (56%), Gaps = 4/62 (6%)
Query: 485 AGAGES----AFLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCL 540
AGAG S A+ Q A + A L +LK DPKA W NLA AY + GD ++ KCL
Sbjct: 386 AGAGASKETGAYATQLKAAHAACLYLQTSLKEDPKAGSAWVNLAAAYEVLGDFTNASKCL 445
Query: 541 EK 542
E+
Sbjct: 446 EQ 447
>gi|449498851|ref|XP_004160652.1| PREDICTED: probable UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase SEC-like [Cucumis
sativus]
Length = 366
Score = 188 bits (478), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 103/196 (52%), Positives = 120/196 (61%), Gaps = 37/196 (18%)
Query: 298 MEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAK 357
ME S KCFQ+LIL DQNH AAL+ YAA LLCKYGS +A AGAN GEG ++ +NVAK
Sbjct: 1 MELSEKCFQELILTDQNHLAALVYYAAFLLCKYGSTVASAGANAGEGGVDEKVVGMNVAK 60
Query: 358 ECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIK 417
ECLLAALK DPKAA W NLANAY++TGDHRSS KCLEK AK EPNCMS K
Sbjct: 61 ECLLAALKVDPKAAVAWENLANAYFVTGDHRSSAKCLEKGAKQEPNCMS----------K 110
Query: 418 DAERSQEPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFAAVQKTHHEVAAAFETEENE 477
+AERSQ+ T WAGF+ V K HE+AA F T+ +E
Sbjct: 111 NAERSQDHT---------------------------WAGFSMVHKIQHEIAAGFRTDLSE 143
Query: 478 LSKMEECAGAGESAFL 493
L + E+ A + F
Sbjct: 144 LREKEDHAVYSLNQFF 159
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/58 (68%), Positives = 45/58 (77%)
Query: 485 AGAGESAFLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEK 542
A AGE ++ +NVAKECLLAALK DPKAA W NLANAY++TGDHRSS KCLEK
Sbjct: 42 ANAGEGGVDEKVVGMNVAKECLLAALKVDPKAAVAWENLANAYFVTGDHRSSAKCLEK 99
>gi|449487817|ref|XP_004157815.1| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase-like [Cucumis sativus]
Length = 276
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 59/93 (63%), Positives = 76/93 (81%)
Query: 393 CLEKAAKLEPNCMSTRYAVAVSRIKDAERSQEPTEQLSWAGNEMASILREGDPVQIEPPI 452
CLEK AKLEPNCMS RYAVA+ R+KDAERSQ+ +EQLSWAGNEMAS++R+GD + I+ +
Sbjct: 5 CLEKGAKLEPNCMSMRYAVAMHRLKDAERSQDRSEQLSWAGNEMASVIRDGDGLTIDHSV 64
Query: 453 AWAGFAAVQKTHHEVAAAFETEENELSKMEECA 485
AWAG + V KT HE+AA F T+++EL + E+ A
Sbjct: 65 AWAGLSMVHKTQHEIAAGFRTDQSELREKEDHA 97
>gi|10177302|dbj|BAB10563.1| unnamed protein product [Arabidopsis thaliana]
Length = 262
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 67/159 (42%), Positives = 98/159 (61%), Gaps = 17/159 (10%)
Query: 405 MSTRYAVAVSRIKDAERSQEPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFAAVQKTH 464
M+TR+AVAV RIKDAERSQ+ ++QLSWAGNEMAS++REG+ V I+PPIAWAG A K
Sbjct: 1 MATRFAVAVQRIKDAERSQDASDQLSWAGNEMASVIREGESVPIDPPIAWAGLAMAHKAQ 60
Query: 465 HEVAAAFETEENELSKMEECA--GAGESAFLDQASAVN---------------VAKECLL 507
HE+AAAF + NEL++MEE A ++ D AV ++++ L
Sbjct: 61 HEIAAAFVADRNELTEMEERAVYSLKQAVTEDPEDAVRWHQLGLHSLCSQQYKLSQKYLK 120
Query: 508 AALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKVLMV 546
AA+ + ++ W+NL + L+ +H + + ++ L V
Sbjct: 121 AAVGRSRECSYAWSNLGISLQLSDEHSEAEEVYKRALTV 159
>gi|428175958|gb|EKX44845.1| hypothetical protein GUITHDRAFT_109267 [Guillardia theta CCMP2712]
Length = 581
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 92/348 (26%), Positives = 164/348 (47%), Gaps = 37/348 (10%)
Query: 137 EKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEIL------LRC 190
EK L+T LV V+++M ++ + F LGLMY R KA ++++ + L L+
Sbjct: 65 EKEKILRTALVAVSKRMGESFYCWFNLGLMYFRNQVYTKAKEAFKRCLDCLKGYKQPLKL 124
Query: 191 EADIARPELLSLVQIHHAQCLLPESS--GDNSLDKELEPEELEEILSKLKESMQSDTRQA 248
+ L + V HAQC + E + G + D E P +++E + ++ ++D Q
Sbjct: 125 INEKRYVTLEARVMSLHAQCCIYELTLPGMVATD-EHNPVDVQE---QFIQATKTDNMQP 180
Query: 249 VVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDL 308
+WN +GL+ + + + + +L D I NLG+++ +G++ +A+ FQ +
Sbjct: 181 DIWNNVGLLHMSLDKFDGAKMIFQPILMNFTQYNDAISNLGLSHLCNGELTDAARSFQTV 240
Query: 309 ILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADP 368
IL+D +H AL NY LLL + + V K A++ DP
Sbjct: 241 ILRDSSHLEALNNYGVLLLRHRNY----------------KNAIVFFEKATQKPAIELDP 284
Query: 369 KAAHIWANLANAYYLTGDHRSSGKCLEKAAKL-EPNCMST-RYAVAVSRIKDAERSQEP- 425
+++W+NLA AY G + + +A +L + N +T A ++ + +E E
Sbjct: 285 GQSYVWSNLACAYSAEGKLNEAARAFRQARELDDTNVQATCNLAHHITWMVQSEADPEAR 344
Query: 426 TEQLSWAGNEMASIL-REGDPVQIEPPIAWAGFAAVQKTHHEVAAAFE 472
+L A + +++L + VQ AW G AAV K+ E+A + E
Sbjct: 345 ARKLEQAEHMYSTVLCDQSSSVQ-----AWTGLAAVFKSQSEMATSEE 387
>gi|116748938|ref|YP_845625.1| hypothetical protein Sfum_1501 [Syntrophobacter fumaroxidans MPOB]
gi|116698002|gb|ABK17190.1| TPR repeat-containing protein [Syntrophobacter fumaroxidans MPOB]
Length = 629
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 124/302 (41%), Gaps = 73/302 (24%)
Query: 147 VHVARKMPKNAHAHF-LLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQI 205
+ A K+P+ + A + +G + R G+ KA SYEK +LR E D+ R V++
Sbjct: 78 IKKAEKLPEMSEADYERMGDTFARQGETTKAFISYEK----VLRKEPDLTR------VRL 127
Query: 206 HHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQS-------------------DTR 246
L D ++ + +++L+K + Q+ + R
Sbjct: 128 KRGMMFLARDMNDEAI------RDFQQVLAKEPGNAQAYEGIGHALFKRRRYDEAEKNFR 181
Query: 247 QAV-----VW---NTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDM 298
+AV +W N LG++ R + ++ + +AV P+ NLGI+Y GD
Sbjct: 182 EAVKLNNSLWMSHNFLGIVYDYKQRPELAVPEYQAAIAVRPDEGLLYNNLGISYAMMGDF 241
Query: 299 EQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKE 358
E++A FQ+ + K +P + N ++LC+ G Q+ A
Sbjct: 242 EKAAAAFQEAMQKRPTNP-KISNNLGIILCRLGR----------------QSEA------ 278
Query: 359 CLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKD 418
LAA A + NL AY + G+ + + E+A L +T YA A +K
Sbjct: 279 --LAAFGKAGDEAQAYNNLGCAYMMDGEFEKAARAFERAVSLR----TTYYAQASDNLKK 332
Query: 419 AE 420
AE
Sbjct: 333 AE 334
>gi|93279690|pdb|2FO7|A Chain A, Crystal Structure Of An 8 Repeat Consensus Tpr Superhelix
(Trigonal Crystal Form)
gi|168177007|pdb|2HYZ|A Chain A, Crystal Structure Of An 8 Repeat Consensus Tpr Superhelix
(Orthorombic Crystal Form)
Length = 136
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 67/155 (43%), Gaps = 21/155 (13%)
Query: 248 AVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQD 307
A W LG K G +I L +DP + + NLG AY++ GD +++ + +Q
Sbjct: 1 AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQK 60
Query: 308 LILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKAD 367
+ D A N L A G+ + A E AL+ D
Sbjct: 61 ALELDPRSAEAWYN------------LGNAYYKQGD---------YDEAIEYYQKALELD 99
Query: 368 PKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 402
P++A W NL NAYY GD+ + + +KA +L+P
Sbjct: 100 PRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDP 134
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 66/151 (43%), Gaps = 25/151 (16%)
Query: 157 AHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLR-CEADIARPELLSLVQIHHAQCLLPES 215
A A + LG Y + G +A+ Y+KA E+ R EA +L ++ Q
Sbjct: 1 AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEA------WYNLGNAYYKQ------ 48
Query: 216 SGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLL 275
GD +E + +++++ D R A W LG K G +I L
Sbjct: 49 -GD-----------YDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKAL 96
Query: 276 AVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQ 306
+DP + + NLG AY++ GD +++ + +Q
Sbjct: 97 ELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQ 127
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 57/131 (43%), Gaps = 21/131 (16%)
Query: 287 NLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGAC 346
NLG AY++ GD +++ + +Q + D A N L A G+
Sbjct: 6 NLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYN------------LGNAYYKQGD--- 50
Query: 347 LDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMS 406
+ A E AL+ DP++A W NL NAYY GD+ + + +KA +L+P
Sbjct: 51 ------YDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAE 104
Query: 407 TRYAVAVSRIK 417
Y + + K
Sbjct: 105 AWYNLGNAYYK 115
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 44/93 (47%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
+ +E + +++++ D R A W LG K G +I L +DP + + NL
Sbjct: 16 DYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNL 75
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALIN 321
G AY++ GD +++ + +Q + D A N
Sbjct: 76 GNAYYKQGDYDEAIEYYQKALELDPRSAEAWYN 108
>gi|73670079|ref|YP_306094.1| TPR repeat-containing protein [Methanosarcina barkeri str. Fusaro]
gi|72397241|gb|AAZ71514.1| TPR repeat [Methanosarcina barkeri str. Fusaro]
Length = 927
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 111/264 (42%), Gaps = 40/264 (15%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQC--- 210
P+N+ A + G Q LG +A+++Y KA EI + + L ++ +
Sbjct: 183 PRNSLAWYNKGSALQELGNYQEAITAYNKAIEIYPEYKEAWYKKGLAFYNSGNYEEAVKA 242
Query: 211 ------LLPES-----SGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILL 259
L P++ + N+L K EE ++ ES++ D + +V WN LG +
Sbjct: 243 CNKTIELDPQNPRVWANKGNALSK---LNSYEEAITAYNESIELDPQNSVAWNGLGFAVA 299
Query: 260 KSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLI-LKDQNHPAA 318
SG + +I + + +DP N + + N G A + G+ E++ K I + QN
Sbjct: 300 SSGNYEEAIKFYNKAIEIDPQNSEALSNKGFALYNVGNREEAIKALDKAIEVNPQN---- 355
Query: 319 LINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLA 378
A+ GS+L G D+A+ + DPK + W N
Sbjct: 356 -----AVAWYDKGSILKNLGNYEEAVEAFDKATEL-------------DPKKSSAWNNKG 397
Query: 379 NAYYLTGDHRSSGKCLEKAAKLEP 402
NA G++ + K +KA +++P
Sbjct: 398 NALSSLGNYDEAIKAYDKAIEIDP 421
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 76/180 (42%), Gaps = 14/180 (7%)
Query: 237 LKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSG 296
+S++ D R ++ W G L SG + I+ + +DP N D N G A G
Sbjct: 481 FDKSIEIDPRNSIAWVNKGNALYNSGEYEGVITACDKAIELDPKNLDAWTNKGKALSSLG 540
Query: 297 DMEQSAKCF--------QDLILKDQNHPAA--LINYAALLLCKYGSVLAGAG----ANTG 342
D E++ K + QD + + A L NY L +++ + +
Sbjct: 541 DYEEAIKAYDKALEIEPQDPLTWNNREIAFGHLNNYEEALRAHNREIVSDSEDPEVSWND 600
Query: 343 EGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 402
+G L + + + A++ DP+ A W N N+++ ++ + K +KA +L+P
Sbjct: 601 KGLALYYSGNYEESVKAYDKAIELDPEYADAWFNKGNSFFSLKNYEEAIKAYDKAIELKP 660
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 66/340 (19%), Positives = 131/340 (38%), Gaps = 38/340 (11%)
Query: 231 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 290
+E ++ ++++ D + WN G+ L + +I + + +DP N N G
Sbjct: 94 KEAINAYDKAIELDPQNPEAWNNKGVALSNLSNYEEAIKAYNKAIELDPQNSLFWYNKGK 153
Query: 291 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQA 350
++ G E+S K +++ + +N A+ L S+ A +G+ L +
Sbjct: 154 TLYELGKQEESTKAYKESLEASEN---------AIELDPRNSL-----AWYNKGSALQEL 199
Query: 351 SAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNC--MSTR 408
A A++ P+ W A+Y +G++ + K K +L+P +
Sbjct: 200 GNYQEAITAYNKAIEIYPEYKEAWYKKGLAFYNSGNYEEAVKACNKTIELDPQNPRVWAN 259
Query: 409 YAVAVSRIKDAERS---------QEPTEQLSW---------AGNEMASILREGDPVQIEP 450
A+S++ E + +P ++W +GN +I ++I+P
Sbjct: 260 KGNALSKLNSYEEAITAYNESIELDPQNSVAWNGLGFAVASSGNYEEAIKFYNKAIEIDP 319
Query: 451 PIAWA----GFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECL 506
+ A GFA + E A + E++ A + + L A E
Sbjct: 320 QNSEALSNKGFALYNVGNREEAIKALDKAIEVNPQNAVAWYDKGSILKNLGNYEEAVEAF 379
Query: 507 LAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKVLMV 546
A + DPK + W N NA G++ + K +K + +
Sbjct: 380 DKATELDPKKSSAWNNKGNALSSLGNYDEAIKAYDKAIEI 419
Score = 46.6 bits (109), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 66/334 (19%), Positives = 127/334 (38%), Gaps = 48/334 (14%)
Query: 231 EEILSKLKESMQS-------DTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCD 283
EE KES+++ D R ++ W G L + G Q +I+ + + + P +
Sbjct: 162 EESTKAYKESLEASENAIELDPRNSLAWYNKGSALQELGNYQEAITAYNKAIEIYPEYKE 221
Query: 284 CIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGE 343
G+A++ SG+ E++ K I D +P N +
Sbjct: 222 AWYKKGLAFYNSGNYEEAVKACNKTIELDPQNPRVWAN---------------------K 260
Query: 344 GACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 403
G L + ++ A +++ DP+ + W L A +G++ + K KA +++P
Sbjct: 261 GNALSKLNSYEEAITAYNESIELDPQNSVAWNGLGFAVASSGNYEEAIKFYNKAIEIDP- 319
Query: 404 CMSTRYAVAVSRIKDAERSQEPTEQLSWAGNEMASILREGDPVQIEP--PIAWAGFAAVQ 461
+++E L GN +I +++ P +AW ++
Sbjct: 320 -------------QNSEALSNKGFALYNVGNREEAIKALDKAIEVNPQNAVAWYDKGSIL 366
Query: 462 KT---HHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKADPKAAH 518
K + E AF+ + EL + A + L + A + A++ DP+
Sbjct: 367 KNLGNYEEAVEAFD-KATELDPKKSSAWNNKGNALSSLGNYDEAIKAYDKAIEIDPQDPG 425
Query: 519 IWANLANAYYLTGDHRSSGKCLEKVLMVYCSSNL 552
W N A G + S K +K + + SS++
Sbjct: 426 PWNNKGIALSNLGSYEESIKAFDKAIEINLSSSV 459
Score = 45.8 bits (107), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 41/196 (20%), Positives = 76/196 (38%), Gaps = 23/196 (11%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
+ E L+ ++++ + + + W G L GR + +++ + L +DP+N N
Sbjct: 712 DYEGALNAYNKAVEINPQYSDAWYNKGNTLCSLGRYEEAVTAFNKTLEIDPHNSFAWCNK 771
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLD 348
GIA G+ E++ K F + D + N +G L
Sbjct: 772 GIALSSLGNYEEAMKSFDKALEIDSQNSLIWSN---------------------KGLALF 810
Query: 349 QASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTR 408
+ A + ++ D W N +A++L G++ + K K +L+P
Sbjct: 811 EFGKYEEAVKAYNKTIEIDQSNTETWNNRGSAFFLIGNYEEAMKNYNKTIELDPEYSLAW 870
Query: 409 Y--AVAVSRIKDAERS 422
Y A S I D E+S
Sbjct: 871 YNRACLYSLINDKEQS 886
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 77/340 (22%), Positives = 131/340 (38%), Gaps = 44/340 (12%)
Query: 231 EEILSKLKESMQSDTRQA-VVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLG 289
EE L + SD+ V WN GL L SG + S+ + +DP D N G
Sbjct: 577 EEALRAHNREIVSDSEDPEVSWNDKGLALYYSGNYEESVKAYDKAIELDPEYADAWFNKG 636
Query: 290 IAYFQSGDMEQSAKCFQDLI-LKDQNHPA------ALIN--YAALLLCKYGSVL------ 334
++F + E++ K + I LK QN A AL N Y A L Y +
Sbjct: 637 NSFFSLKNYEEAIKAYDKAIELKPQNSLAWNNKGLALNNSSYYAEALKSYDKAIELNSQD 696
Query: 335 AGAGANTGE--GACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGK 392
+ A N G + D A+N + A++ +P+ + W N N G + +
Sbjct: 697 SAAWNNKGNTLSSLYDYEGALNAYNK----AVEINPQYSDAWYNKGNTLCSLGRYEEAVT 752
Query: 393 CLEKAAKLEP-NCMST-RYAVAVSRIKDAERSQEPTEQLSWAGNEMASILREGDPVQIEP 450
K +++P N + +A+S + + E + + ++ + +
Sbjct: 753 AFNKTLEIDPHNSFAWCNKGIALSSLGNYEEAMKSFDK--------------ALEIDSQN 798
Query: 451 PIAWA--GFAAVQKTHHE--VAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECL 506
+ W+ G A + +E V A +T E + S E G + FL A +
Sbjct: 799 SLIWSNKGLALFEFGKYEEAVKAYNKTIEIDQSNTETWNNRGSAFFL--IGNYEEAMKNY 856
Query: 507 LAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKVLMV 546
++ DP+ + W N A Y L D S L++ + +
Sbjct: 857 NKTIELDPEYSLAWYNRACLYSLINDKEQSISDLKRAIEI 896
Score = 43.9 bits (102), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 36/174 (20%), Positives = 65/174 (37%), Gaps = 25/174 (14%)
Query: 231 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 290
EE ++ ++++ D + W G+ L G + ++ L +D N N G+
Sbjct: 748 EEAVTAFNKTLEIDPHNSFAWCNKGIALSSLGNYEEAMKSFDKALEIDSQNSLIWSNKGL 807
Query: 291 AYFQSGDMEQSAKCFQDLILKDQNHPAALINY--AALLLCKYGSVLAGAGANTGEGACLD 348
A F+ G E++ K + I DQ++ N A L+ Y +
Sbjct: 808 ALFEFGKYEEAVKAYNKTIEIDQSNTETWNNRGSAFFLIGNYEEAMKNYN---------- 857
Query: 349 QASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 402
++ DP+ + W N A Y L D S L++A ++ P
Sbjct: 858 -------------KTIELDPEYSLAWYNRACLYSLINDKEQSISDLKRAIEINP 898
>gi|386002707|ref|YP_005921006.1| Tetratricopeptide TPR_2 [Methanosaeta harundinacea 6Ac]
gi|357210763|gb|AET65383.1| Tetratricopeptide TPR_2 [Methanosaeta harundinacea 6Ac]
Length = 949
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 85/411 (20%), Positives = 147/411 (35%), Gaps = 56/411 (13%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSL---------VQ 204
P++ H + G + LG +A+ Y++A E D+ R L+L V+
Sbjct: 90 PQDPHIWYSKGFVLYGLGIYDEAIDCYDRAME-FNSTGPDLWRARGLALYSLGRYEEAVR 148
Query: 205 IHHAQCLLPESSGDNSLDKELEP---EELEEILSKLKESMQSDTRQAVVWNTLGLILLKS 261
+ + + GD K L E+ + ++ D A W+ L L
Sbjct: 149 SYDEAIVFDPAQGDLWYQKGLALCGLGRYEKAIESYDFAITIDGDDAASWHGKALALYSL 208
Query: 262 GRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALIN 321
GR + +I + +DP+ D N GIA + G E++ KC+ + D + A N
Sbjct: 209 GRAEEAIDCYDRAIDIDPSLTDVWYNKGIALYALGRHEEAFKCYDAAVEIDPLYHPAWFN 268
Query: 322 YAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAY 381
+G V A +C A+ DP +W N NA
Sbjct: 269 ---------------------KGLAFYSLGRVEEAIDCYDRAIDIDPSLVAVWNNKGNAL 307
Query: 382 YLTGDHRSSGKCLEKAAKLEPNCMSTRY--AVAVSRIKDAERSQEPTEQLSWAGNEMASI 439
Y G + +C +A +++P + Y V + R+ E + E ++L
Sbjct: 308 YALGRFDEAQECYRRAVEIDPEYSNPWYNLGVVLQRLGRGEEALEAYDRL---------- 357
Query: 440 LREGDPVQIEPPI--AWA--GFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQ 495
++I+P + AW G A ++ AA E+ ++ L
Sbjct: 358 ------IEIDPNLSEAWYNRGLALYSLGRYDEAAGCYDRVLEIDPENGDVWYDKALALGS 411
Query: 496 ASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKVLMV 546
A +C AL+A P+ + N N Y + S C V+ +
Sbjct: 412 LGRYEEALDCYDEALEAGPRRPEVLNNRCNILYSLERYNESVGCYGDVIGI 462
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 70/347 (20%), Positives = 125/347 (36%), Gaps = 57/347 (16%)
Query: 230 LEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLG 289
L+E LS S++ D + +W + G +L G +I + + D G
Sbjct: 75 LDEALSCFNRSLEIDPQDPHIWYSKGFVLYGLGIYDEAIDCYDRAMEFNSTGPDLWRARG 134
Query: 290 IAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGS------------VLAGA 337
+A + G E++ + + + I+ D L L LC G + G
Sbjct: 135 LALYSLGRYEEAVRSYDEAIVFDPAQ-GDLWYQKGLALCGLGRYEKAIESYDFAITIDGD 193
Query: 338 GANTGEGACLDQASAVNV--AKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLE 395
A + G L S A +C A+ DP +W N A Y G H + KC +
Sbjct: 194 DAASWHGKALALYSLGRAEEAIDCYDRAIDIDPSLTDVWYNKGIALYALGRHEEAFKCYD 253
Query: 396 KAAKLEPNCMSTRY-----AVAVSRIKDA----ERS--QEPTEQLSW--AGNEMASILRE 442
A +++P + ++ R+++A +R+ +P+ W GN + ++ R
Sbjct: 254 AAVEIDPLYHPAWFNKGLAFYSLGRVEEAIDCYDRAIDIDPSLVAVWNNKGNALYALGR- 312
Query: 443 GDPVQIEPPIAWAGFAAVQKTHH---EVAAAFETEENELSKMEECAGAGESAFLDQASAV 499
F Q+ + E+ + L + + G GE A
Sbjct: 313 --------------FDEAQECYRRAVEIDPEYSNPWYNLGVVLQRLGRGEEAL------- 351
Query: 500 NVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKVLMV 546
E ++ DP + W N A Y G + + C ++VL +
Sbjct: 352 ----EAYDRLIEIDPNLSEAWYNRGLALYSLGRYDEAAGCYDRVLEI 394
Score = 46.6 bits (109), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 36/174 (20%), Positives = 61/174 (35%), Gaps = 27/174 (15%)
Query: 230 LEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLG 289
LEE + E ++ D VW GL L GR +I L + P+ N G
Sbjct: 551 LEEAVESFDEVIEIDPSYEGVWRLKGLALYALGRSDEAIDCYDEALEISPSEVSLWYNRG 610
Query: 290 IAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQ 349
+ F G ++ + + +I D+ +G L
Sbjct: 611 VVLFSLGRYGEAIESYDRVIELDRYE---------------------------KGEALYS 643
Query: 350 ASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 403
+ A EC L+ P A W A+ + GD+ S +C ++ +++P
Sbjct: 644 LGRYDEAIECYEKVLEVSPLEAKAWYQKGLAHQILGDYERSAECYDRVVEIDPG 697
Score = 45.4 bits (106), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 55/263 (20%), Positives = 102/263 (38%), Gaps = 48/263 (18%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 213
P A F GL + LG+ +A+ Y++A +I P SLV + + +
Sbjct: 260 PLYHPAWFNKGLAFYSLGRVEEAIDCYDRAIDI---------DP---SLVAVWNNKG--- 304
Query: 214 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 273
N+L +E +E + +++ D + W LG++L + GR + ++
Sbjct: 305 -----NALYALGRFDEAQECY---RRAVEIDPEYSNPWYNLGVVLQRLGRGEEALEAYDR 356
Query: 274 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL--LCKYG 331
L+ +DPN + N G+A + G +++A C+ ++ D + + A L L +Y
Sbjct: 357 LIEIDPNLSEAWYNRGLALYSLGRYDEAAGCYDRVLEIDPENGDVWYDKALALGSLGRYE 416
Query: 332 SVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSG 391
L +C AL+A P+ + N N Y + S
Sbjct: 417 EAL-----------------------DCYDEALEAGPRRPEVLNNRCNILYSLERYNESV 453
Query: 392 KCLEKAAKLEPNCMSTRYAVAVS 414
C ++P + Y V+
Sbjct: 454 GCYGDVIGIDPGYENAWYNRGVA 476
Score = 43.5 bits (101), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 73/356 (20%), Positives = 131/356 (36%), Gaps = 49/356 (13%)
Query: 231 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 290
EE L ++ D + W GL L GR + +L +DP N D + +
Sbjct: 348 EEALEAYDRLIEIDPNLSEAWYNRGLALYSLGRYDEAAGCYDRVLEIDPENGDVWYDKAL 407
Query: 291 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCK---------YGSVLAGAGANT 341
A G E++ C+ + + P L N +L YG V+ G +
Sbjct: 408 ALGSLGRYEEALDCYDEALEAGPRRPEVLNNRCNILYSLERYNESVGCYGDVI---GIDP 464
Query: 342 G-EGACLDQASAVNVAKECLLAALKADPKAA------HIWANLANAYYLTGDHRSSGKCL 394
G E A ++ A+ A+ AA W + +A+ G + + +
Sbjct: 465 GYENAWYNRGVALYTLGRYEEASASYGEAAALNGSRVDAWVGMGDAFAAAGIYDRAVEAY 524
Query: 395 EKAAKLEPNCMSTRYAVAV-----SRIKDAERSQ------EPTEQLSW--AGNEMASILR 441
+ A L P + Y + SR+++A S +P+ + W G + ++ R
Sbjct: 525 DGAIALYPGDPAVWYNRGLLLYNASRLEEAVESFDEVIEIDPSYEGVWRLKGLALYALGR 584
Query: 442 EGDPV-------QIEPPIA--WAGFAAVQKTHHEVAAAFETEEN--ELSKMEECAGAGES 490
+ + +I P W V + A E+ + EL + E+ GE+
Sbjct: 585 SDEAIDCYDEALEISPSEVSLWYNRGVVLFSLGRYGEAIESYDRVIELDRYEK----GEA 640
Query: 491 AFLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKVLMV 546
+ + A EC L+ P A W A+ + GD+ S +C ++V+ +
Sbjct: 641 LY--SLGRYDEAIECYEKVLEVSPLEAKAWYQKGLAHQILGDYERSAECYDRVVEI 694
Score = 39.7 bits (91), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 21/91 (23%), Positives = 42/91 (46%)
Query: 226 EPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCI 285
E LE+ ++ ++ D W+ G L+K+GRL+ + + +A+DP++ +
Sbjct: 813 EAGRLEDAVASFDRAIALDQEDPEAWSMRGRALMKAGRLEDAAASFDRAIALDPSSGEAQ 872
Query: 286 GNLGIAYFQSGDMEQSAKCFQDLILKDQNHP 316
G + G E++ C++ I D P
Sbjct: 873 RGRGSVFEAQGRAEEAIGCYEAAIALDPPTP 903
>gi|118350024|ref|XP_001008293.1| TPR Domain containing protein [Tetrahymena thermophila]
gi|89290060|gb|EAR88048.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
Length = 373
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 83/389 (21%), Positives = 148/389 (38%), Gaps = 88/389 (22%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 213
P+ +AH LG +Y+++G+P +KA+E +L+ +I + SL+++ + L
Sbjct: 60 PQFENAHTSLGYLYKKIGKP-------QKAKECILKA-LEINPKSVFSLLELGY----LY 107
Query: 214 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 273
E D ++ E+ + + L Q + + LGL K LQ +
Sbjct: 108 E-------DMNMQDEQKQTYMKIL----QIEPKNFEAQYGLGLYYFKQNMLQEARHWFLQ 156
Query: 274 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSV 333
+L ++PN + NLGI + G+ E + + +Q I Q +P Y L
Sbjct: 157 VLEINPNFKSVVYNLGIISEKLGEYENAKQFYQKAI---QLNPQDANTYFNL-------- 205
Query: 334 LAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKC 393
G ++ V A++C L + +PK+ + NL Y+ G + + KC
Sbjct: 206 ----------GVTYEKMKNVEEARKCYLKVQQLEPKSIYALNNLGAIYFDLGQFQEAQKC 255
Query: 394 LEKAAKLEPNCMSTRYAVAVSRIKDAERSQEPTEQLSWAGNEMASILREGDPVQIEPPIA 453
E K++P Y ++ IK GN SI +QI P
Sbjct: 256 FEDIIKIDPQNFGAYYNLSAIYIKK--------------GNIEESIQCLQKTIQINPEYI 301
Query: 454 WAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKAD 513
A H ++ F T+ + A +C A+K +
Sbjct: 302 NA--------HKQLGQIFYTK----------------------GQFDEAIQCYQQAIKIN 331
Query: 514 PKAAHIWANLANAYYLTGDHRSSGKCLEK 542
+ + + +AN Y L G+ + + EK
Sbjct: 332 SQDSDSYFMIANTYNLMGNQKEAKFYQEK 360
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 42/208 (20%), Positives = 80/208 (38%), Gaps = 10/208 (4%)
Query: 339 ANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAA 398
A+T G + AKEC+L AL+ +PK+ L Y + K
Sbjct: 65 AHTSLGYLYKKIGKPQKAKECILKALEINPKSVFSLLELGYLYEDMNMQDEQKQTYMKIL 124
Query: 399 KLEPNCMSTRYAVAVSRIKDAERSQEPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFA 458
++EP +Y + + K L A + +L E +P + + G
Sbjct: 125 QIEPKNFEAQYGLGLYYFKQ--------NMLQEARHWFLQVL-EINP-NFKSVVYNLGII 174
Query: 459 AVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKADPKAAH 518
+ + +E A F + +L+ + ++ V A++C L + +PK+ +
Sbjct: 175 SEKLGEYENAKQFYQKAIQLNPQDANTYFNLGVTYEKMKNVEEARKCYLKVQQLEPKSIY 234
Query: 519 IWANLANAYYLTGDHRSSGKCLEKVLMV 546
NL Y+ G + + KC E ++ +
Sbjct: 235 ALNNLGAIYFDLGQFQEAQKCFEDIIKI 262
>gi|325187990|emb|CCA22532.1| predicted protein putative [Albugo laibachii Nc14]
Length = 968
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 110/296 (37%), Gaps = 65/296 (21%)
Query: 251 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 310
+ LG L +SGRLQ SI+V + + P+ GNL AY+ SG M+ + F+ IL
Sbjct: 245 YTNLGNALRESGRLQDSINVYKKAIRIRPDFATAHGNLASAYYDSGQMDLAILTFRQAIL 304
Query: 311 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 370
+ N P A N L A G+ LDQ+ C AL+
Sbjct: 305 LEPNFPDAYNN------------LGNALREMGQ---LDQSIL------CYRTALRLKSDH 343
Query: 371 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQEPTEQLS 430
H + NL NA G + + C AA+L P+ A A S + + Q EQ
Sbjct: 344 PHAYNNLGNALKDKGMIKEAIHCYSTAARLMPHL-----AAAYSNLGSVLKEQGKLEQ-- 396
Query: 431 WAGNEMASILREGDPVQIEPPIAWAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGES 490
++ + I+P A AF N M
Sbjct: 397 -------ALAHYQQAITIDP---------------RFADAFSNMGNVFKDMNR------- 427
Query: 491 AFLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKVLMV 546
LD + +C A++ P+ ++NLA+AY G R + C K L +
Sbjct: 428 --LDDSI------QCYTTAIRLKPEFTDAYSNLASAYKDGGQLREAIACYRKALFL 475
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 51/107 (47%), Gaps = 2/107 (1%)
Query: 226 EPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCI 285
E +LE+ L+ ++++ D R A ++ +G + RL SI ++ + + P D
Sbjct: 390 EQGKLEQALAHYQQAITIDPRFADAFSNMGNVFKDMNRLDDSIQCYTTAIRLKPEFTDAY 449
Query: 286 GNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINY--AALLLCKY 330
NL AY G + ++ C++ + N P A NY + + +C +
Sbjct: 450 SNLASAYKDGGQLREAIACYRKALFLRPNFPDAFANYFHSMVFICDW 496
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 85/225 (37%), Gaps = 47/225 (20%)
Query: 226 EPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCI 285
E L++ ++ K++++ A L SG++ +I + ++PN D
Sbjct: 254 ESGRLQDSINVYKKAIRIRPDFATAHGNLASAYYDSGQMDLAILTFRQAILLEPNFPDAY 313
Query: 286 GNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINY-------------------AALL 326
NLG A + G ++QS C++ + +HP A N AA L
Sbjct: 314 NNLGNALREMGQLDQSILCYRTALRLKSDHPHAYNNLGNALKDKGMIKEAIHCYSTAARL 373
Query: 327 LCKYGSVLAGAGANTGEGACLDQASAV-------------------NVAK---------E 358
+ + + G+ E L+QA A NV K +
Sbjct: 374 MPHLAAAYSNLGSVLKEQGKLEQALAHYQQAITIDPRFADAFSNMGNVFKDMNRLDDSIQ 433
Query: 359 CLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 403
C A++ P+ ++NLA+AY G R + C KA L PN
Sbjct: 434 CYTTAIRLKPEFTDAYSNLASAYKDGGQLREAIACYRKALFLRPN 478
Score = 42.4 bits (98), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 115/281 (40%), Gaps = 51/281 (18%)
Query: 261 SGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALI 320
+G Q +IS+ L VD + + + LG A+FQSG+ +S Q I D A
Sbjct: 51 NGYYQETISLCEYLYEVDMYHTNNLLLLGAAHFQSGNFAESIYYNQQCIRLDPQFAEA-- 108
Query: 321 NYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANA 380
YG++ G L + + A + A++ P+ + + NLA +
Sbjct: 109 ---------YGNL----------GNALKETGDIVGAIHFYVKAIQLHPRFSDAYNNLAVS 149
Query: 381 YYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQEPTEQLSWAGNEMASIL 440
Y G + + + + A L+P+ + A S + + ++Q E + S
Sbjct: 150 YMQIGQWQQAIETYKTALTLDPSLVD-----AHSNLGNLYKAQGMYE-------DAKSCF 197
Query: 441 REGDPVQIEPP--IAWAGFAAVQKTHHEVAAAFETEENELSKMEECAGA--------GES 490
D ++++P IAW+ A V + ++ AA + + + A ES
Sbjct: 198 --TDAIRVKPTFAIAWSNLAGVYQHSGQLDAAIIHYQEAIRLAPDFVDAYTNLGNALRES 255
Query: 491 AFLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTG 531
L ++NV K+ A++ P A NLA+AYY +G
Sbjct: 256 GRLQ--DSINVYKK----AIRIRPDFATAHGNLASAYYDSG 290
>gi|220922402|ref|YP_002497704.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium
nodulans ORS 2060]
gi|219947009|gb|ACL57401.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium
nodulans ORS 2060]
Length = 818
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 88/411 (21%), Positives = 157/411 (38%), Gaps = 56/411 (13%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 213
PK+A A+ GL + R G+ +A++ Y++A LR + A + H
Sbjct: 57 PKSAVAYTHRGLAFYRKGEYDRAIADYDQA----LRLDPKSA------VAYTHRGLAFYR 106
Query: 214 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 273
+ E + ++ ++++ D + A ++ GL + G +I+
Sbjct: 107 KG-------------EYDRAIADYDQALRLDPKYANIYINRGLAFYRKGEYDRAIADYDQ 153
Query: 274 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCK--YG 331
L +D + N G A+ G+ +++ + + + +P A N K Y
Sbjct: 154 ALRLDLRDAVVYTNRGDAFRSKGEYDRAIADYDQALRFNPKYPYAYRNRGDTFQSKGEYD 213
Query: 332 SVLAG-----------AGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANA 380
+A A A T G S + A AL+ DPK A+I+ N A
Sbjct: 214 RAIADYDQALRLNPEDAAAYTHRGLAFQSKSEYDRAIADYDQALRLDPKYANIYINRGYA 273
Query: 381 YYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQEPTEQLSWAGNEMASIL 440
+ G++ + ++A +L+P + +A + DA RS+ G +I
Sbjct: 274 FRSKGEYNRAIADFDQALRLDPKSV-----IAYTGRGDAFRSK---------GENDRAIA 319
Query: 441 REGDPVQIEPPIAWA----GFAAVQKTHHEVAAAFETEENELSKMEECAGAGES-AFLDQ 495
++ P A+A G A K ++ A A T+ L A AF D+
Sbjct: 320 DYDQALRFNPKYAYAYRNRGDAFRNKGEYDRAIADYTQALRLDPQSATAYNNRGLAFQDK 379
Query: 496 ASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKVLMV 546
+ A AL+ DPK A + N A+Y G+H + E+ L +
Sbjct: 380 GE-YDRAIADYDQALRLDPKDAAAYTNRGAAFYRKGEHDRAIADYEEALRL 429
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 33/188 (17%), Positives = 73/188 (38%), Gaps = 15/188 (7%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
E + ++ ++++ D + AV + GL + G +I+ L +DP + +
Sbjct: 41 EYDRAIADYDQALRLDPKSAVAYTHRGLAFYRKGEYDRAIADYDQALRLDPKSAVAYTHR 100
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSV--------------L 334
G+A+++ G+ +++ + + D + IN L + G L
Sbjct: 101 GLAFYRKGEYDRAIADYDQALRLDPKYANIYIN-RGLAFYRKGEYDRAIADYDQALRLDL 159
Query: 335 AGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCL 394
A T G + A AL+ +PK + + N + + G++ +
Sbjct: 160 RDAVVYTNRGDAFRSKGEYDRAIADYDQALRFNPKYPYAYRNRGDTFQSKGEYDRAIADY 219
Query: 395 EKAAKLEP 402
++A +L P
Sbjct: 220 DQALRLNP 227
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 34/174 (19%), Positives = 68/174 (39%), Gaps = 21/174 (12%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
E + ++ ++++ D + A +N GL G +I+ L +DP + N
Sbjct: 347 EYDRAIADYTQALRLDPQSATAYNNRGLAFQDKGEYDRAIADYDQALRLDPKDAAAYTNR 406
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLD 348
G A+++ G+ +++ +++ + D AA G GA L+
Sbjct: 407 GAAFYRKGEHDRAIADYEEALRLDPKSAAAY---------------------NGRGAALN 445
Query: 349 QASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 402
+ + A L AL+ P + + A+ GD + L +A +L P
Sbjct: 446 KKGDYDRAIADLDQALRLKPGFTNPHYHRGMAFRHKGDLDRALADLNEAVRLNP 499
Score = 38.9 bits (89), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 59/303 (19%), Positives = 112/303 (36%), Gaps = 39/303 (12%)
Query: 248 AVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQD 307
A + G G +I+ L +DP + + G+A+++ G+ +++ +
Sbjct: 26 ATDYYNRGDAFRSKGEYDRAIADYDQALRLDPKSAVAYTHRGLAFYRKGEYDRAIADYDQ 85
Query: 308 LILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKAD 367
+ D P + + Y T G + + A AL+ D
Sbjct: 86 ALRLD---PKSAVAY------------------THRGLAFYRKGEYDRAIADYDQALRLD 124
Query: 368 PKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQEPTE 427
PK A+I+ N A+Y G++ + ++A +L+ R AV + DA RS+
Sbjct: 125 PKYANIYINRGLAFYRKGEYDRAIADYDQALRLD-----LRDAVVYTNRGDAFRSK---- 175
Query: 428 QLSWAGNEMASILREGDPVQIEPPIAWA----GFAAVQKTHHEVAAAFETEENELSKMEE 483
G +I ++ P +A G K ++ A A + L+ +
Sbjct: 176 -----GEYDRAIADYDQALRFNPKYPYAYRNRGDTFQSKGEYDRAIADYDQALRLNPEDA 230
Query: 484 CAGAGESAFLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKV 543
A S + A AL+ DPK A+I+ N A+ G++ + ++
Sbjct: 231 AAYTHRGLAFQSKSEYDRAIADYDQALRLDPKYANIYINRGYAFRSKGEYNRAIADFDQA 290
Query: 544 LMV 546
L +
Sbjct: 291 LRL 293
>gi|291288388|ref|YP_003505204.1| hypothetical protein Dacet_2488 [Denitrovibrio acetiphilus DSM
12809]
gi|290885548|gb|ADD69248.1| Tetratricopeptide TPR_2 repeat protein [Denitrovibrio acetiphilus
DSM 12809]
Length = 510
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 82/190 (43%), Gaps = 21/190 (11%)
Query: 231 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 290
E L +K+++ D V N LG I ++G+ + + LSS + PN D NLG+
Sbjct: 57 ESALELMKQAVSLDKTNPVFHNNLGEIYRQTGQFEHAEFHLSSAAELKPNYSDAFSNLGL 116
Query: 291 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQA 350
Y + G + + CF + + D + +ALIN L EG+ D
Sbjct: 117 LYKERGLVNDAKYCFAEALQSDPKNLSALINTGNLF--------------NSEGSYED-- 160
Query: 351 SAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYA 410
A +C AAL+ P + A+ AYY TG++ +S K + P R
Sbjct: 161 -----AIQCYEAALEISPDNPNALASAGAAYYKTGEYNTSAKYYSRLVNGHPELHRDRVN 215
Query: 411 VAVSRIKDAE 420
+A+ +++ +
Sbjct: 216 LALITLRNKD 225
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 68/163 (41%), Gaps = 21/163 (12%)
Query: 241 MQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQ 300
++ D A + LGLI + +G+ +S++ ++ +++D N NLG Y Q+G E
Sbjct: 33 LEVDRHNADAMHYLGLIHIANGKTESALELMKQAVSLDKTNPVFHNNLGEIYRQTGQFE- 91
Query: 301 SAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECL 360
H ++ AA L Y + G + VN AK C
Sbjct: 92 --------------HAEFHLSSAAELKPNYSDAFSNL------GLLYKERGLVNDAKYCF 131
Query: 361 LAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 403
AL++DPK N N + G + + +C E A ++ P+
Sbjct: 132 AEALQSDPKNLSALINTGNLFNSEGSYEDAIQCYEAALEISPD 174
>gi|386813873|ref|ZP_10101097.1| conserved hypothetical protein [planctomycete KSU-1]
gi|386403370|dbj|GAB63978.1| conserved hypothetical protein [planctomycete KSU-1]
Length = 576
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 109/264 (41%), Gaps = 44/264 (16%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 213
P A A+F LGL+Y + AVSS E+A ++ IA A L
Sbjct: 293 PDFAEAYFNLGLIYSEENKTKDAVSSLEQA----IKLNPKIAE-----------AHFTLG 337
Query: 214 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 273
E N + EE LS+ K+++ S A + + G SI+ S
Sbjct: 338 EIYTKNDMQ--------EEALSEYKKAIDSKPDYAEAYYNYAELNATKGMHDRSIAAWSK 389
Query: 274 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSV 333
+ ++PNN D NLGIAY+ GD++++ + +I + N ALIN
Sbjct: 390 TIELNPNNTDAYFNLGIAYYNQGDLDKAISLWIKVIEINPNDYDALIN------------ 437
Query: 334 LAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKC 393
LA A G LD+ + + P A ++ L NAY + ++
Sbjct: 438 LADAYNAKG---LLDKTI------QTWEKITEVYPNHAGLYYKLGNAYAKKNMYNTALVQ 488
Query: 394 LEKAAKLEPNCMSTRYAVAVSRIK 417
EKA +++PN ++ Y + ++ K
Sbjct: 489 WEKAIEIDPNLVNAYYNLGLTYQK 512
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 77/337 (22%), Positives = 137/337 (40%), Gaps = 51/337 (15%)
Query: 103 CRSRISSKMDSALEFG--VDADGDQSGLGTSSSSREEKVSSLKTGLVH--------VARK 152
CR+ +++++ + G A +G T + +S K G++ + K
Sbjct: 23 CRTPHYTEVENKTKKGYLTSATDKIAGANTPEQHKVIGISYFKKGMIDESLEELKLASEK 82
Query: 153 MPKNAHAHFLLGLMYQRLGQP-------LKAVSSY------EKAE---EILLRCEADIAR 196
+ ++A H LG +Y +P L AVS Y EKA+ ++ L + A
Sbjct: 83 IQEDAELHHYLGKIYYDNNKPDEAIAELLAAVSYYKITQTAEKADAYNDLGLAYKDKNAF 142
Query: 197 PELLSLVQIHHAQCLLPESSGDNSLDKELEPEE--LEEILSKLKESMQSDTRQAVVWNTL 254
E SL + L P ++ N L ++ L++ ++ LK+S++ D + A TL
Sbjct: 143 SE--SLTAFKESLELNPSATDTNYHVGLLYYKKNMLDDSITYLKKSIKLDLKNADAHFTL 200
Query: 255 GLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQN 314
GL+ + S + ++ + + LG+ Y+Q GD+E+S + +L DQN
Sbjct: 201 GLVYYTKSLYDKATSEFKQTIELNSKDAEAHNYLGLLYYQQGDLEESIAEHKAALLSDQN 260
Query: 315 HPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIW 374
+P A N L K NT + A++ K+ L+ P A +
Sbjct: 261 YPDAYNNLGIALYAK---------NNTKD--------AIDAFKKT----LELQPDFAEAY 299
Query: 375 ANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAV 411
NL Y + + LE+A KL P + +
Sbjct: 300 FNLGLIYSEENKTKDAVSSLEQAIKLNPKIAEAHFTL 336
>gi|113474349|ref|YP_720410.1| hypothetical protein Tery_0481 [Trichodesmium erythraeum IMS101]
gi|110165397|gb|ABG49937.1| TPR repeat [Trichodesmium erythraeum IMS101]
Length = 3145
Score = 62.4 bits (150), Expect = 7e-07, Method: Composition-based stats.
Identities = 56/250 (22%), Positives = 105/250 (42%), Gaps = 44/250 (17%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 213
P N+ +F LG + G KA + Y+KA + + D A Q H+ L+
Sbjct: 1126 PNNSQGNFNLGFAWAEKGDLSKASTYYQKA----INLQPDYA--------QAHNNLGLIF 1173
Query: 214 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 273
+ G+ L + + +++++ + A W LG+ILLK G+++ +I
Sbjct: 1174 QEKGN-----------LSKASNYYQQALEINPNYAEAWCNLGVILLKQGQIELAIEYFRK 1222
Query: 274 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSV 333
L ++P+ NLG + + G++ +++ +Q + + N+ A C G V
Sbjct: 1223 SLELNPDYAQAYNNLGFVFQEKGNLSKASNYYQQALEINPNYAEA--------WCNLGVV 1274
Query: 334 LAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKC 393
L G + +A E +L+ +P A +L + G+ +S
Sbjct: 1275 LRKQG-------------QIELAIEYFRKSLELNPDYAMTHNSLGVTFEEEGNFTASIAS 1321
Query: 394 LEKAAKLEPN 403
+KA +LEPN
Sbjct: 1322 YQKALELEPN 1331
Score = 54.7 bits (130), Expect = 1e-04, Method: Composition-based stats.
Identities = 47/189 (24%), Positives = 88/189 (46%), Gaps = 26/189 (13%)
Query: 149 VARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHA 208
+ ++ P N LLGL + Q +A++ Y+K+ + V ++A
Sbjct: 36 IIKRQPNNFLVLELLGLCAYKNNQIEQAIAYYQKSLK-----------------VNYNYA 78
Query: 209 QCLLPESSGDNSLDKELEP-EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSS 267
+ N+L L+ ++++ L K +++ A W+ LGLIL G+ +++
Sbjct: 79 ET-------HNNLAVALQDNQQIDAALRHCKIAIKLCPNYAEAWHNLGLILRDKGQFEAA 131
Query: 268 ISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLL 327
I L + PNN + +LG + G + +S K +Q+ + D+N+ A AA+LL
Sbjct: 132 IEHYQKSLEIKPNNAEVYHSLGTISLELGKLSESQKYYQEALKLDKNYLNAHFGLAAVLL 191
Query: 328 CKYGSVLAG 336
K GS++ G
Sbjct: 192 -KQGSLMQG 199
Score = 52.8 bits (125), Expect = 5e-04, Method: Composition-based stats.
Identities = 43/200 (21%), Positives = 93/200 (46%), Gaps = 16/200 (8%)
Query: 219 NSLDKELEPE-ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAV 277
++L K ++ E LEE ++ ++++ + + ++ LG I L+ G+++S+I + +
Sbjct: 1065 SNLAKLMKKEGRLEEAIAHYQKAISLEPNNSSNYSNLGFIFLEKGQIESAIINSEKSIEI 1124
Query: 278 DPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGA 337
+PNN NLG A+ + GD+ +++ +Q I ++ A N L+ + G++ +
Sbjct: 1125 NPNNSQGNFNLGFAWAEKGDLSKASTYYQKAINLQPDYAQAH-NNLGLIFQEKGNLSKAS 1183
Query: 338 ---------GANTGEGAC-----LDQASAVNVAKECLLAALKADPKAAHIWANLANAYYL 383
N E C L + + +A E +L+ +P A + NL +
Sbjct: 1184 NYYQQALEINPNYAEAWCNLGVILLKQGQIELAIEYFRKSLELNPDYAQAYNNLGFVFQE 1243
Query: 384 TGDHRSSGKCLEKAAKLEPN 403
G+ + ++A ++ PN
Sbjct: 1244 KGNLSKASNYYQQALEINPN 1263
Score = 39.3 bits (90), Expect = 5.8, Method: Composition-based stats.
Identities = 29/107 (27%), Positives = 50/107 (46%), Gaps = 9/107 (8%)
Query: 238 KESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGD 297
+++++ A W LG IL K G+ + +I L ++P+ + +LG +FQ G
Sbjct: 1804 QKAIEIHPNHAEAWCRLGNILQKQGQFELAIEYCQKSLELNPDYIEANHSLGYIFFQLGK 1863
Query: 298 MEQSAKCFQDLILK--------DQNHPAALINYAALLLCKYGSVLAG 336
+ +S K ++ I K + NH A A LL K G+ + G
Sbjct: 1864 LAESQKYYEQAIKKYYEQAIELNTNHVNAHFGLANALL-KQGNFIPG 1909
Score = 38.5 bits (88), Expect = 9.0, Method: Composition-based stats.
Identities = 27/121 (22%), Positives = 61/121 (50%), Gaps = 9/121 (7%)
Query: 219 NSLDKELEPE-ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAV 277
++L K ++ E LEE ++ +++++ + + +++LG I L+ G++ +I +
Sbjct: 1716 SNLAKLMKKEGRLEEAIAHYQKAIELEPNNSSNYSSLGWIFLQKGQIDLAIINYKKSRKI 1775
Query: 278 DPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGA 337
+PN+ NLG + ++G++ ++ +Q I NH A C+ G++L
Sbjct: 1776 NPNSSWININLGFVWEKNGNLPKANTYYQKAIEIHPNHAEA--------WCRLGNILQKQ 1827
Query: 338 G 338
G
Sbjct: 1828 G 1828
>gi|312137039|ref|YP_004004376.1| hypothetical protein Mfer_0815 [Methanothermus fervidus DSM 2088]
gi|311224758|gb|ADP77614.1| Tetratricopeptide TPR_2 repeat protein [Methanothermus fervidus DSM
2088]
Length = 225
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 75/169 (44%), Gaps = 17/169 (10%)
Query: 257 ILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHP 316
+LL GR ++ + + +L DP+NC+ + N GIA G E+S + F D +LK +N
Sbjct: 12 LLLNMGRFSDALYLYNKVLEEDPDNCEALNNSGIALLFLGKYEESIQYF-DEVLKIKNDS 70
Query: 317 AALINYAALL--LCKYGSVL--------------AGAGANTGEGACLDQASAVNVAKECL 360
A IN + L L +Y + A +G L + A +C
Sbjct: 71 GAWINKSNALINLGRYEEAIECCDRALEIAINDSEKVYALVNKGNALFSIDEYDEALDCY 130
Query: 361 LAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRY 409
ALK +P IW N N G + + +C +KA +++P + + Y
Sbjct: 131 DEALKINPNDVGIWNNKGNLLKSMGKYEEAIECFDKALEIDPRSIGSWY 179
Score = 38.5 bits (88), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 40/82 (48%)
Query: 228 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 287
+E +E L E+++ + +WN G +L G+ + +I L +DP + N
Sbjct: 121 DEYDEALDCYDEALKINPNDVGIWNNKGNLLKSMGKYEEAIECFDKALEIDPRSIGSWYN 180
Query: 288 LGIAYFQSGDMEQSAKCFQDLI 309
+A G+ E++ KC +++I
Sbjct: 181 KSLALEALGEYEEALKCIENVI 202
>gi|451947622|ref|YP_007468217.1| tetratricopeptide repeat protein [Desulfocapsa sulfexigens DSM
10523]
gi|451906970|gb|AGF78564.1| tetratricopeptide repeat protein [Desulfocapsa sulfexigens DSM
10523]
Length = 215
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 86/187 (45%), Gaps = 20/187 (10%)
Query: 228 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 287
E+L ++++L++ + + V + LGL+ LKSGR+ +I L L +D + N
Sbjct: 12 EDLPTVIAELEKKCKQNPDNVVTLHHLGLVYLKSGRIDEAIECLEKCLVIDEQANQPMIN 71
Query: 288 LGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL 347
LG YF G++++ A+ ++ +K Q A A+ G
Sbjct: 72 LGAIYFGQGNLDK-AQELNEMAIKVQPD-------------------TSAQAHANLGLIW 111
Query: 348 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 407
Q + ++ + A++ DPK A +W NL + + G+ + K KA +LEP+
Sbjct: 112 QQRNELDKSIASYEKAIQYDPKLATVWMNLTSVLTMKGEDDRALKAATKATQLEPDSALA 171
Query: 408 RYAVAVS 414
+ +AV+
Sbjct: 172 QNNLAVA 178
Score = 39.7 bits (91), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 74/164 (45%), Gaps = 22/164 (13%)
Query: 151 RKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQC 210
++ P N LGL+Y + G+ +A+ EK L + +P +++L I+ Q
Sbjct: 26 KQNPDNVVTLHHLGLVYLKSGRIDEAIECLEKC----LVIDEQANQP-MINLGAIYFGQG 80
Query: 211 LLPESSGDNSLDKELEPE-----------------ELEEILSKLKESMQSDTRQAVVWNT 253
L ++ N + +++P+ EL++ ++ ++++Q D + A VW
Sbjct: 81 NLDKAQELNEMAIKVQPDTSAQAHANLGLIWQQRNELDKSIASYEKAIQYDPKLATVWMN 140
Query: 254 LGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGD 297
L +L G ++ + ++P++ NL +A F SGD
Sbjct: 141 LTSVLTMKGEDDRALKAATKATQLEPDSALAQNNLAVALFFSGD 184
>gi|386000858|ref|YP_005919157.1| hypothetical protein Mhar_0143 [Methanosaeta harundinacea 6Ac]
gi|357208914|gb|AET63534.1| TPR repeat-containing protein [Methanosaeta harundinacea 6Ac]
Length = 609
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 73/183 (39%), Gaps = 21/183 (11%)
Query: 232 EILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIA 291
E + E+++ D A WN GL L G SI + +DP N GIA
Sbjct: 41 EAVQAYDEAIRLDPEYASAWNNKGLALDYQGNYDESIKAYDEAIRLDPEFAAAWNNKGIA 100
Query: 292 YFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQAS 351
G+ ++ +CF + I D + A N G L+ G TG D+
Sbjct: 101 LGNQGNYTEATRCFDEAIRLDPEYAGAWYN--------KGKALSERGNYTGAILAYDE-- 150
Query: 352 AVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAV 411
A++ DP+ A W +A + G++ + + ++A +L+P +T Y
Sbjct: 151 -----------AIRLDPELAAAWHKKGDALFERGNYTEAIQAFDEAIRLDPEDATTWYNK 199
Query: 412 AVS 414
V+
Sbjct: 200 GVA 202
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/174 (21%), Positives = 76/174 (43%), Gaps = 27/174 (15%)
Query: 232 EILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIA 291
E + E+++ D AV W+ G +L G+ +I + + PN D N G A
Sbjct: 279 EAIQAFDEAIRLDPELAVAWSNKGTVLADQGKYDEAIQAYDEAIRLHPNYVDAWINKGSA 338
Query: 292 YFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQAS 351
++ G+ ++ + + + I D ++ A+ G+ L+ G T
Sbjct: 339 LYEQGNYPEAIQAYDEAIRLDPDN--------AMTWYNKGNALSELGNYT---------- 380
Query: 352 AVNVAKECLLA---ALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 402
E +LA A++ DP+ A +W + N++ + G + + + ++A +L+P
Sbjct: 381 ------EGILAYDEAIRLDPEEADVWVSKGNSFRMQGKYDEAIQAYDEAIRLDP 428
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 62/320 (19%), Positives = 121/320 (37%), Gaps = 41/320 (12%)
Query: 232 EILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIA 291
E + E+++ D A WN G L + G+ +I L + +DP + N G
Sbjct: 211 EAIPAYDEAIRLDPEDADAWNNRGNALNELGKYDEAIHALDKAIELDPEDAAPWNNKGKP 270
Query: 292 YFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQAS 351
+ G+ ++ + F + I D A N G+VLA G
Sbjct: 271 LWMKGNYTEAIQAFDEAIRLDPELAVAWSN--------KGTVLADQG------------- 309
Query: 352 AVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAV 411
+ A + A++ P W N +A Y G++ + + ++A +L+P+ T Y
Sbjct: 310 KYDEAIQAYDEAIRLHPNYVDAWINKGSALYEQGNYPEAIQAYDEAIRLDPDNAMTWYNK 369
Query: 412 AVSRIKDAERSQEPTEQLSWAGNEMASILREGDPVQIEPPIA--WAGFA---AVQKTHHE 466
+ LS GN IL + ++++P A W +Q + E
Sbjct: 370 GNA--------------LSELGNYTEGILAYDEAIRLDPEEADVWVSKGNSFRMQGKYDE 415
Query: 467 VAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKADPKAAHIWANLANA 526
A++ E L E + + A + A++ DP+ A +W + N+
Sbjct: 416 AIQAYD-EAIRLDPEEADVWVSKGNSFRMQGKYDEAIQAYDEAIRLDPEEADVWVSKGNS 474
Query: 527 YYLTGDHRSSGKCLEKVLMV 546
+ + G + + + ++ + +
Sbjct: 475 FRMQGKYDEAIQAYDEAIRL 494
>gi|237833307|ref|XP_002365951.1| signal transduction protein, putative [Toxoplasma gondii ME49]
gi|211963615|gb|EEA98810.1| signal transduction protein, putative [Toxoplasma gondii ME49]
gi|221508918|gb|EEE34487.1| signal transduction protein, putative [Toxoplasma gondii VEG]
Length = 978
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 69/155 (44%), Gaps = 14/155 (9%)
Query: 248 AVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQD 307
A +WN G+ L GRLQ ++ L +DP N + + N+G+A + G++ Q+ + ++
Sbjct: 172 ADLWNCKGVTLRALGRLQEALDCCREALRLDPRNTNALNNIGVALKERGELLQAVEHYRA 231
Query: 308 LILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKAD 367
++ + + P N A L T G L Q + A C AL AD
Sbjct: 232 SLVANPHQPTCRTNLAVAL--------------TDLGTKLKQEKKLQAALVCYTEALTAD 277
Query: 368 PKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 402
P A + NL + T D ++ + +A +L P
Sbjct: 278 PTYAPCYYNLGVIHAETDDPHTALQMYREATRLNP 312
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 83/199 (41%), Gaps = 30/199 (15%)
Query: 126 SGLGTSSSSRE---EKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEK 182
+ LGT + E + +S K L++ P + A++ LG+ Y L + KA+ +Y+
Sbjct: 360 TDLGTQQKASEGAKKAISLYKKALIY----NPYYSDAYYNLGVAYADLHKFDKALVNYQL 415
Query: 183 AEEILLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQ 242
A RC E + + + H K+ E + + +
Sbjct: 416 AVAFNPRCA------EAYNNMGVIH---------------KDRENTDQATVYYNKALEIN 454
Query: 243 SDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSA 302
D Q + N LG++ +G++ ++ + V+PN + NLG+ Y GD+E S
Sbjct: 455 PDFSQTL--NNLGVLYTCTGKIGEALHFAKRAIEVNPNYAEAYNNLGVLYRDQGDIEDSV 512
Query: 303 KCFQDLILKDQNHPAALIN 321
K + +L D N P A N
Sbjct: 513 KAYDKCLLLDPNSPNAFHN 531
>gi|221488412|gb|EEE26626.1| signal transduction protein, putative [Toxoplasma gondii GT1]
Length = 978
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 69/155 (44%), Gaps = 14/155 (9%)
Query: 248 AVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQD 307
A +WN G+ L GRLQ ++ L +DP N + + N+G+A + G++ Q+ + ++
Sbjct: 172 ADLWNCKGVTLRALGRLQEALDCCREALRLDPGNTNALNNIGVALKERGELLQAVEHYRA 231
Query: 308 LILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKAD 367
++ + + P N A L T G L Q + A C AL AD
Sbjct: 232 SLVANPHQPTCRTNLAVAL--------------TDLGTKLKQEKKLQAALVCYTEALTAD 277
Query: 368 PKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 402
P A + NL + T D ++ + +A +L P
Sbjct: 278 PTYAPCYYNLGVIHAETDDPHTALQMYREATRLNP 312
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 83/199 (41%), Gaps = 30/199 (15%)
Query: 126 SGLGTSSSSRE---EKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEK 182
+ LGT + E + +S K L++ P + A++ LG+ Y L + KA+ +Y+
Sbjct: 360 TDLGTQQKASEGAKKAISLYKKALIY----NPYYSDAYYNLGVAYADLHKFDKALVNYQL 415
Query: 183 AEEILLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQ 242
A RC E + + + H K+ E + + +
Sbjct: 416 AVAFNPRCA------EAYNNMGVIH---------------KDRENTDQATVYYNKALEIN 454
Query: 243 SDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSA 302
D Q + N LG++ +G++ ++ + V+PN + NLG+ Y GD+E S
Sbjct: 455 PDFSQTL--NNLGVLYTCTGKIGEALHFAKRAIEVNPNYAEAYNNLGVLYRDQGDIEDSV 512
Query: 303 KCFQDLILKDQNHPAALIN 321
K + +L D N P A N
Sbjct: 513 KAYDKCLLLDPNSPNAFHN 531
>gi|386001554|ref|YP_005919853.1| putative membrane protein, containing TPR repeats [Methanosaeta
harundinacea 6Ac]
gi|357209610|gb|AET64230.1| putative membrane protein, containing TPR repeats [Methanosaeta
harundinacea 6Ac]
Length = 463
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 79/349 (22%), Positives = 131/349 (37%), Gaps = 55/349 (15%)
Query: 231 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 290
EE L+ S++ D A WN G++L GR ++ L VDP N G
Sbjct: 83 EEALACYNRSLEIDPDYAPAWNNRGVVLEALGRGDEALESYDRALEVDPAYALAWSNQGG 142
Query: 291 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQA 350
++ GD +S +C++ + D A N G L A
Sbjct: 143 VFYSRGDYNRSIECYERALEIDPRSREAWNNL---------------------GRSLFAA 181
Query: 351 SAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRY- 409
+ E ALK DP A W N A G H+ + C E+A K+EP+ + Y
Sbjct: 182 GEYERSIEGYDEALKIDPLYATAWNNKGIALGTLGRHQEALDCYEEALKIEPSHVMALYN 241
Query: 410 -AVAVSRIKDAERSQE---------PTEQLSWA---------GNEMASILREGDPVQIEP 450
+A+ + E + E P+ +W G + + + ++++P
Sbjct: 242 KGIALGLLGRQEEAVECYDAVLKVDPSYPPAWYNRGVALGLLGRQEQAAASYDEALKLDP 301
Query: 451 PIAWAGFAAVQKTHHEVAAAFETEENELSKME---ECAGAGESAFLDQA---SAVNVAKE 504
G+A + +E L + E A A+ +Q SA+ +E
Sbjct: 302 -----GYAQAWNNRGIALGSLGRQEEALQSYQRALEIDPAYSQAWYNQGVAFSALGRYQE 356
Query: 505 CLLA---ALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKVLMVYCSS 550
+ + AL+ DP+ + W N A G H+ + +C E+ L V +S
Sbjct: 357 AISSYDRALELDPELSEAWNNKGIALSALGRHQEAIECYERALEVGLAS 405
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 121/312 (38%), Gaps = 50/312 (16%)
Query: 93 EGKKINKLGKCRSRISSKMDSALEFGVDAD--GDQSGLGTSSSSREEKVSSLKTGLVHVA 150
+G +++LG+ ++S D+ALE + + G+ S+ R E+ + + +
Sbjct: 38 KGVALSELGRYEEAVAS-YDNALELDPEYALAWNNKGIALSALGRNEEALACYNRSLEID 96
Query: 151 RKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQC 210
P A A G++ + LG+ +A+ SY++A E+ D A +L +
Sbjct: 97 ---PDYAPAWNNRGVVLEALGRGDEALESYDRALEV------DPA----YALAWSNQGGV 143
Query: 211 LLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISV 270
S GD + E + +++ D R WN LG L +G + SI
Sbjct: 144 FY--SRGDYNRSIEC-----------YERALEIDPRSREAWNNLGRSLFAAGEYERSIEG 190
Query: 271 LSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKY 330
L +DP N GIA G +++ C+++ + + +H AL N
Sbjct: 191 YDEALKIDPLYATAWNNKGIALGTLGRHQEALDCYEEALKIEPSHVMALYN--------- 241
Query: 331 GSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSS 390
+G L A EC A LK DP W N A L G +
Sbjct: 242 ------------KGIALGLLGRQEEAVECYDAVLKVDPSYPPAWYNRGVALGLLGRQEQA 289
Query: 391 GKCLEKAAKLEP 402
++A KL+P
Sbjct: 290 AASYDEALKLDP 301
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 72/167 (43%), Gaps = 13/167 (7%)
Query: 249 VVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDL 308
+ W G+ L + GR + +++ + L +DP N GIA G E++ C+
Sbjct: 33 LAWYNKGVALSELGRYEEAVASYDNALELDPEYALAWNNKGIALSALGRNEEALACYNRS 92
Query: 309 ILKDQNHPAALINYAALL---------LCKYGSVL----AGAGANTGEGACLDQASAVNV 355
+ D ++ A N +L L Y L A A A + +G N
Sbjct: 93 LEIDPDYAPAWNNRGVVLEALGRGDEALESYDRALEVDPAYALAWSNQGGVFYSRGDYNR 152
Query: 356 AKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 402
+ EC AL+ DP++ W NL + + G++ S + ++A K++P
Sbjct: 153 SIECYERALEIDPRSREAWNNLGRSLFAAGEYERSIEGYDEALKIDP 199
>gi|385809655|ref|YP_005846051.1| hypothetical protein IALB_1072 [Ignavibacterium album JCM 16511]
gi|383801703|gb|AFH48783.1| TPR repeat protein [Ignavibacterium album JCM 16511]
Length = 471
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 107/272 (39%), Gaps = 36/272 (13%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 213
P+N A F LGL+YQR + +A+ +E+A ++ + D V++++
Sbjct: 139 PENEDAFFSLGLLYQRQFKYAEAIPYFERA----IKIDPD--------YVEVYYELGFCY 186
Query: 214 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 273
E+ N+ DK LE E + + D A W G+IL+K+G+L+ +++
Sbjct: 187 EAL--NNFDKALEAYE---------KFLDFDPYNASGWYNKGIILVKTGKLEEAVNCFDL 235
Query: 274 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL------- 326
+V + N G G +Q+ +CF +I D A N A++
Sbjct: 236 ATSVRDDFASAWYNKGNTLADLGKYQQAIECFHKVIEIDPYDETAFYNLASVYEEIGELQ 295
Query: 327 -LCKYGSVLAGAG-----ANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANA 380
KY S + A G C D +A A+ W A+
Sbjct: 296 QAVKYYSKAIESDEEYFEAYLARGYCYDSLGKYQLALRDFNKAISISSDDPDAWRAKADL 355
Query: 381 YYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVA 412
Y G S K +AA+L+P+ Y +A
Sbjct: 356 EYSLGHLEESIKSYLEAARLQPDGYDIWYNLA 387
>gi|398805152|ref|ZP_10564133.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Polaromonas sp. CF318]
gi|398092314|gb|EJL82729.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Polaromonas sp. CF318]
Length = 759
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 112/286 (39%), Gaps = 32/286 (11%)
Query: 146 LVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQ- 204
+ R P +A AHF LG + RL Q A SSY +A L + D A EL
Sbjct: 50 FMKAVRYKPDSAGAHFNLGATHARLDQHEAAASSYREA----LALKPDFAEAELALGAAL 105
Query: 205 ------------IHHAQCLLPE-SSGDNSLDKELEP-EELEEILSKLKESMQSDTRQAVV 250
HA L P + D+ L L E EE+ + ++++ A
Sbjct: 106 EELGQDEAAAESYRHALELQPSYADADDKLVNLLRRLERFEELADTYRRMLETNPHNADW 165
Query: 251 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 310
N LG + K GR + S + +A DP++ NLG G + ++ C++ +
Sbjct: 166 LNNLGAVQRKLGRFKDSAASFRRAVAADPDDALAHNNLGATLRTLGQLTEAVDCYRQALK 225
Query: 311 KDQNHPAALINYAALL--LCKYGSVLAG-----------AGANTGEGACLDQASAVNVAK 357
N A N LL L + S +A A + T GA L + A
Sbjct: 226 IRPNFIEAHHNLGNLLAELGQADSAVASYREALEINPDFAESLTAMGAVLQTRGQFDEAV 285
Query: 358 ECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 403
EC AL P A +NL NA G SS K +A +L+P+
Sbjct: 286 ECHRRALAIKPDYAQAHSNLGNALQDLGQLESSLKSTRRALELQPD 331
>gi|301094298|ref|XP_002896255.1| UDP-N-acetylglucosamine-peptide N-acetylglucosaminyltransferase,
putative [Phytophthora infestans T30-4]
gi|262109650|gb|EEY67702.1| UDP-N-acetylglucosamine-peptide N-acetylglucosaminyltransferase,
putative [Phytophthora infestans T30-4]
Length = 977
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 94/409 (22%), Positives = 152/409 (37%), Gaps = 92/409 (22%)
Query: 136 EEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIA 195
EE V + K ++ P+ AH LG +Y+ G+ + A Y A+ I ++ IA
Sbjct: 155 EEAVETYKMAIM----LDPRLVDAHSNLGNLYKVQGRLVDAKHCY--AQAIRVKPSFAIA 208
Query: 196 RPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLG 255
L L++ D LD +E +E+++ A ++ LG
Sbjct: 209 WSNLAGLLK------------DDGQLDAAVE---------HYREAIRLAPDFADAYSNLG 247
Query: 256 LILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNH 315
L +SGR+ +I S L + PN GNL Y+ +G ME + F+ I + N
Sbjct: 248 NALKESGRVDEAIQAYKSALQIRPNFAIAHGNLASCYYDAGQMELAIHTFRHAIQLEPNF 307
Query: 316 PAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWA 375
P A N G L + + A C AL+ P H +
Sbjct: 308 PDAYNNL---------------------GNALRECGHLEQAVTCYRTALQLKPDHPHAYN 346
Query: 376 NLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQEPTEQLSWAGNE 435
NL NA G + + C AA+L P ++A A S I + Q +Q
Sbjct: 347 NLGNALKDKGLVKEALHCYTTAARLLP-----QFAAAHSNIGSVLKEQGKLDQ------- 394
Query: 436 MASILREGDPVQIEPPIAWAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQ 495
++ + I+P A A + + F+ +L ++EE
Sbjct: 395 --ALAHYQQAITIDPNFADA--------YSNMGNVFK----DLCRLEE------------ 428
Query: 496 ASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKVL 544
A +C A++ P+ ++NLA+AY G + C K L
Sbjct: 429 ------AIQCYSTAIRLKPQFPDAYSNLASAYKDGGRLDDAITCYRKAL 471
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 77/350 (22%), Positives = 134/350 (38%), Gaps = 41/350 (11%)
Query: 151 RKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEI----------LLRCEADIARPELL 200
R P A A+ LG + G+ +A+ +Y+ A +I L C D + EL
Sbjct: 234 RLAPDFADAYSNLGNALKESGRVDEAIQAYKSALQIRPNFAIAHGNLASCYYDAGQMEL- 292
Query: 201 SLVQIHHAQCLLPE-SSGDNSLDKEL-EPEELEEILSKLKESMQSDTRQAVVWNTLGLIL 258
++ HA L P N+L L E LE+ ++ + ++Q +N LG L
Sbjct: 293 AIHTFRHAIQLEPNFPDAYNNLGNALRECGHLEQAVTCYRTALQLKPDHPHAYNNLGNAL 352
Query: 259 LKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAA 318
G ++ ++ ++ + P N+G + G ++Q+ +Q I D N
Sbjct: 353 KDKGLVKEALHCYTTAARLLPQFAAAHSNIGSVLKEQGKLDQALAHYQQAITIDPNF--- 409
Query: 319 LINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLA 378
A A + G + A +C A++ P+ ++NLA
Sbjct: 410 ------------------ADAYSNMGNVFKDLCRLEEAIQCYSTAIRLKPQFPDAYSNLA 451
Query: 379 NAYYLTGDHRSSGKCLEKAAKLEPNC--MSTRYAVAVSRIKDAERSQEPTEQLSWAGNE- 435
+AY G + C KA L P Y ++ I D + ++ TE L +E
Sbjct: 452 SAYKDGGRLDDAITCYRKALALRPQFPDAFANYFHSMVFICDWQSRKQDTETLQRFVDEQ 511
Query: 436 --MASILREGDPVQ-IEPPIAWAGFAAVQKTHHEVAAAFETEENELSKME 482
+A +L P + P++ F + + + E A + ELS M
Sbjct: 512 LSVADVLPSVQPFHALVYPLSMQRFQDISRRYAE-RAKMNVQLVELSPMR 560
Score = 42.4 bits (98), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 83/201 (41%), Gaps = 33/201 (16%)
Query: 136 EEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIA 195
E+ V+ +T L + P + HA Y LG LK ++A L C A
Sbjct: 325 EQAVTCYRTAL----QLKPDHPHA-------YNNLGNALKDKGLVKEA----LHCYTTAA 369
Query: 196 RPELLSLVQIHHAQCLLPESSGDNSLDKELEPEE--LEEILSKLKESMQSDTRQAVVWNT 253
R LLP+ + +S + E+ L++ L+ ++++ D A ++
Sbjct: 370 R--------------LLPQFAAAHSNIGSVLKEQGKLDQALAHYQQAITIDPNFADAYSN 415
Query: 254 LGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQ 313
+G + RL+ +I S+ + + P D NL AY G ++ + C++ +
Sbjct: 416 MGNVFKDLCRLEEAIQCYSTAIRLKPQFPDAYSNLASAYKDGGRLDDAITCYRKALALRP 475
Query: 314 NHPAALINY--AALLLCKYGS 332
P A NY + + +C + S
Sbjct: 476 QFPDAFANYFHSMVFICDWQS 496
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 110/273 (40%), Gaps = 35/273 (12%)
Query: 261 SGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALI 320
+G Q ++ + L D D + LG +FQ G++ +S I +Q I
Sbjct: 49 AGYYQEALRLCEQLYESDAYRTDNLLLLGALHFQLGNLSES-------IFYNQQ----CI 97
Query: 321 NYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANA 380
A YG++ G L + V A + + A+K +P+ + NLAN
Sbjct: 98 RVAPDFAEAYGNL----------GNALKELGDVAGAVQFYVRAIKLNPRFGDAYNNLANC 147
Query: 381 YYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQEPTEQLSWAGNEMASIL 440
Y L G + + + A L+P R A S + + + Q +L A + A +
Sbjct: 148 YMLLGQTEEAVETYKMAIMLDP-----RLVDAHSNLGNLYKVQ---GRLVDAKHCYAQAI 199
Query: 441 REGDPVQIEPPIAWAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESA--FLDQASA 498
R V+ IAW+ A + K ++ AA E + + A A + L ++
Sbjct: 200 R----VKPSFAIAWSNLAGLLKDDGQLDAAVEHYREAIRLAPDFADAYSNLGNALKESGR 255
Query: 499 VNVAKECLLAALKADPKAAHIWANLANAYYLTG 531
V+ A + +AL+ P A NLA+ YY G
Sbjct: 256 VDEAIQAYKSALQIRPNFAIAHGNLASCYYDAG 288
>gi|425453499|ref|ZP_18833256.1| TPR repeat protein (modular protein) [Microcystis aeruginosa PCC
9807]
gi|389802856|emb|CCI18142.1| TPR repeat protein (modular protein) [Microcystis aeruginosa PCC
9807]
Length = 1039
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 107/262 (40%), Gaps = 40/262 (15%)
Query: 220 SLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDP 279
SL K+L+ LE+ ++ ++ + + A W+ LG+I+ G++ +I L ++P
Sbjct: 383 SLQKQLK---LEDAIALYQQLINQSPQYAAAWHQLGVIMDSLGQIDQAILAYKQALLINP 439
Query: 280 NNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGA 339
N + NLGI GD++++ CF I +QN+ A A
Sbjct: 440 NYAESHNNLGIIAVSKGDLDEAIICFNQAIRSNQNY---------------------AFA 478
Query: 340 NTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAK 399
+ G L + A A++ +P NL N L G + + A K
Sbjct: 479 DNNLGLVLQMQDKLGDAGVKFQEAIRKNPNYPEAHFNLGNVLQLQGKTEEAIAYFQTAIK 538
Query: 400 LEPNCMSTRYAVAVSRIKDAERSQEPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFAA 459
L P +Y A + + A QE E E S+ ++ +Q P A+A +
Sbjct: 539 LNP-----KYIKAYNSLALALGRQEKIE-------EAMSVFKQALAIQPNSPEAFACLFS 586
Query: 460 VQKTHHEVAAAFETEENELSKM 481
++ E+ +ET E +L ++
Sbjct: 587 MK----EMTCNWETREADLIQL 604
>gi|348687602|gb|EGZ27416.1| hypothetical protein PHYSODRAFT_553979 [Phytophthora sojae]
Length = 986
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 72/319 (22%), Positives = 120/319 (37%), Gaps = 65/319 (20%)
Query: 226 EPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCI 285
E +LE + +E+++ A ++ LG L ++GR++ +I S L + PN
Sbjct: 218 EDGQLEAAIDHYREAIRLAPDFADAYSNLGNALKEAGRVEEAIQAYKSALQIRPNFAIAH 277
Query: 286 GNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGA 345
GNL Y+ +G ME + F+ I + N P A N G
Sbjct: 278 GNLASCYYDAGQMELAIHTFRHAIQLEPNFPDAYNNL---------------------GN 316
Query: 346 CLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 405
L + + A C AL+ P H + NL NA G + + C AA+L P
Sbjct: 317 ALRECGQLEQAVTCYRTALQLKPDHPHAYNNLGNALKDKGLVKEALHCYTTAARLLP--- 373
Query: 406 STRYAVAVSRIKDAERSQEPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFAAVQKTHH 465
++A A S I + Q +Q ++ + I+P A +
Sbjct: 374 --QFAAAHSNIGSVLKEQGKLDQ---------ALAHYQQAITIDPNFA--------DAYS 414
Query: 466 EVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKADPKAAHIWANLAN 525
+ F+ +L ++EE A +C A++ P+ ++NLA+
Sbjct: 415 NMGNVFK----DLCRLEE------------------AIQCYSTAIRLKPQFPDAYSNLAS 452
Query: 526 AYYLTGDHRSSGKCLEKVL 544
AY G + C K L
Sbjct: 453 AYKDGGRLDDAITCYRKAL 471
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 73/336 (21%), Positives = 129/336 (38%), Gaps = 40/336 (11%)
Query: 151 RKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEI----------LLRCEADIARPELL 200
R P A A+ LG + G+ +A+ +Y+ A +I L C D + EL
Sbjct: 234 RLAPDFADAYSNLGNALKEAGRVEEAIQAYKSALQIRPNFAIAHGNLASCYYDAGQMEL- 292
Query: 201 SLVQIHHAQCLLPE-SSGDNSLDKEL-EPEELEEILSKLKESMQSDTRQAVVWNTLGLIL 258
++ HA L P N+L L E +LE+ ++ + ++Q +N LG L
Sbjct: 293 AIHTFRHAIQLEPNFPDAYNNLGNALRECGQLEQAVTCYRTALQLKPDHPHAYNNLGNAL 352
Query: 259 LKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAA 318
G ++ ++ ++ + P N+G + G ++Q+ +Q I D N
Sbjct: 353 KDKGLVKEALHCYTTAARLLPQFAAAHSNIGSVLKEQGKLDQALAHYQQAITIDPNF--- 409
Query: 319 LINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLA 378
A A + G + A +C A++ P+ ++NLA
Sbjct: 410 ------------------ADAYSNMGNVFKDLCRLEEAIQCYSTAIRLKPQFPDAYSNLA 451
Query: 379 NAYYLTGDHRSSGKCLEKAAKLEPNC--MSTRYAVAVSRIKDAERSQEPTEQLSWAGNE- 435
+AY G + C KA L P+ Y ++ I D + + TE L +E
Sbjct: 452 SAYKDGGRLDDAITCYRKALALRPHFPDAFANYFHSMVFICDWQSRKHDTETLQRFVDEQ 511
Query: 436 --MASILREGDPVQ-IEPPIAWAGFAAVQKTHHEVA 468
M +L P + P++ F + + + E A
Sbjct: 512 LSMDGVLPSVQPFHALVYPLSMQRFQDISRRYAERA 547
Score = 42.4 bits (98), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 84/201 (41%), Gaps = 33/201 (16%)
Query: 136 EEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIA 195
E+ V+ +T L + P + HA Y LG LK ++A L C A
Sbjct: 325 EQAVTCYRTAL----QLKPDHPHA-------YNNLGNALKDKGLVKEA----LHCYTTAA 369
Query: 196 RPELLSLVQIHHAQCLLPESSGDNSLDKELEPEE--LEEILSKLKESMQSDTRQAVVWNT 253
R LLP+ + +S + E+ L++ L+ ++++ D A ++
Sbjct: 370 R--------------LLPQFAAAHSNIGSVLKEQGKLDQALAHYQQAITIDPNFADAYSN 415
Query: 254 LGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQ 313
+G + RL+ +I S+ + + P D NL AY G ++ + C++ +
Sbjct: 416 MGNVFKDLCRLEEAIQCYSTAIRLKPQFPDAYSNLASAYKDGGRLDDAITCYRKALALRP 475
Query: 314 NHPAALINY--AALLLCKYGS 332
+ P A NY + + +C + S
Sbjct: 476 HFPDAFANYFHSMVFICDWQS 496
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 73/323 (22%), Positives = 115/323 (35%), Gaps = 51/323 (15%)
Query: 231 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 290
+E L ++ +SD + LG + + G L SI + V PN + GNLG
Sbjct: 53 QEALRLCEQLYESDAYRTDNLLLLGALHFQLGNLSESIFYNQQCIRVAPNFAEAYGNLGN 112
Query: 291 AYFQSGDMEQSAKCFQDLI------------------LKDQNHPAALINYAALLLCKYGS 332
A + GD+ + + + I L QN+ A A++L
Sbjct: 113 ALKELGDLAGAVQFYVRAIKLNPRFGDAYNNLANCYMLLGQNNEAVETYKMAIML---DP 169
Query: 333 VLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGK 392
L A +N G V AK C A++A P A W+NLA G ++
Sbjct: 170 QLVDAHSNLGN--LYKVQGRVEDAKLCYEQAIRAKPSFAIAWSNLAGLLKEDGQLEAAID 227
Query: 393 CLEKAAKLEPNCMSTRYAVAVSRIKDAERSQEPTEQLSWAGNEMASILREGDPVQIEPPI 452
+A +L P+ + Y+ + +K+A R +E + A +QI P
Sbjct: 228 HYREAIRLAPD-FADAYSNLGNALKEAGRVEEAIQAYKSA-------------LQIRPNF 273
Query: 453 A---------WAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAK 503
A + ++ H A + E N A L + + A
Sbjct: 274 AIAHGNLASCYYDAGQMELAIHTFRHAIQLEPNFPDAYNNLGNA-----LRECGQLEQAV 328
Query: 504 ECLLAALKADPKAAHIWANLANA 526
C AL+ P H + NL NA
Sbjct: 329 TCYRTALQLKPDHPHAYNNLGNA 351
Score = 40.4 bits (93), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 108/280 (38%), Gaps = 51/280 (18%)
Query: 262 GRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALIN 321
G Q ++ + L D D + LG +FQ G++ +S I +Q N
Sbjct: 50 GYYQEALRLCEQLYESDAYRTDNLLLLGALHFQLGNLSES-------IFYNQQCIRVAPN 102
Query: 322 YAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAY 381
+A YG++ G L + + A + + A+K +P+ + NLAN Y
Sbjct: 103 FAE----AYGNL----------GNALKELGDLAGAVQFYVRAIKLNPRFGDAYNNLANCY 148
Query: 382 YLTGDHRSSGKCLEKAAKLEPNCMSTR------YAVAVSRIKDAERSQEPTEQLSWAGNE 435
L G + + + + A L+P + Y V R++DA+ E
Sbjct: 149 MLLGQNNEAVETYKMAIMLDPQLVDAHSNLGNLYKVQ-GRVEDAKLCYEQA--------- 198
Query: 436 MASILREGDPVQIEP--PIAWAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESA-- 491
++ +P IAW+ A + K ++ AA + + + A A +
Sbjct: 199 ----------IRAKPSFAIAWSNLAGLLKEDGQLEAAIDHYREAIRLAPDFADAYSNLGN 248
Query: 492 FLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTG 531
L +A V A + +AL+ P A NLA+ YY G
Sbjct: 249 ALKEAGRVEEAIQAYKSALQIRPNFAIAHGNLASCYYDAG 288
>gi|381160076|ref|ZP_09869308.1| tetratricopeptide repeat protein [Thiorhodovibrio sp. 970]
gi|380878140|gb|EIC20232.1| tetratricopeptide repeat protein [Thiorhodovibrio sp. 970]
Length = 250
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 82/182 (45%), Gaps = 21/182 (11%)
Query: 222 DKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNN 281
D+ E +++E + +E + D + + N LG++ + G + +++ + LA +P+
Sbjct: 50 DRLHEAGQIDEAETLYREVLNQDPYEPITLNQLGVLKINDGDPEGALTFIRRALASEPDA 109
Query: 282 CDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANT 341
+ NLG+A Q +E++A F + D ++ AA N A+L+ +
Sbjct: 110 SEYHYNLGVALTQLERIEEAASAFDRSLELDPSNAAACNNLGAMLMMQ------------ 157
Query: 342 GEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLE 401
+Q A A L A+K DP+ A + NL TG H+ + LE A +L
Sbjct: 158 ------EQTEAATAA---FLTAIKLDPQYAGAYNNLGRLLAQTGKHQDAETILEHAIRLS 208
Query: 402 PN 403
P
Sbjct: 209 PT 210
>gi|118384080|ref|XP_001025193.1| TPR Domain containing protein [Tetrahymena thermophila]
gi|89306960|gb|EAS04948.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
Length = 658
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 72/343 (20%), Positives = 137/343 (39%), Gaps = 51/343 (14%)
Query: 231 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 290
EE L K ++ ++R V +GL + GR+ +I V L ++P+ +C+ +L
Sbjct: 234 EEALILFKRCLEINSRNEVAHYNIGLEYIHQGRVDEAILVFLKSLDLNPSYEECLNSLAS 293
Query: 291 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL--LCKYGSVLAGAGANTGEGACLD 348
AY + G ME + + +Q + +QN+ AL N + C++
Sbjct: 294 AYEEKGMMEDAIETYQKCLQLNQNNEIALYNLGLIYKQQCQF------------------ 335
Query: 349 QASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTR 408
+ ++ K+C ++ +PK + L N+Y L G S + + KL PN S
Sbjct: 336 -SQSILYFKKC----IQINPKDPDYYNGLGNSYRLNGQLDDSIQTILICVKLNPNDDSYH 390
Query: 409 YAVAVSRIKDA---ERSQEPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFAAVQ---- 461
Y + ++ + E SQ ++ L + ++ G + A A VQ
Sbjct: 391 YNLGLAYYQKGCFLEASQYFSKSLEINPKDSQTLYHYGLCCYELEQLDKAVSAFVQSLEY 450
Query: 462 -----KTHHEVAAAFETEENELSKMEEC------AGAGESAFLD-------QASAVNVAK 503
T++ + A+ ++N++ + +C S + + Q ++
Sbjct: 451 DPKNENTYYNLGQAY-YDQNKIEESIQCFKICLEINPNNSLYYNSLGLCFCQKGQLDEGI 509
Query: 504 ECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKVLMV 546
C +L +P + NL N Y L G+ S KC + L +
Sbjct: 510 ACFKKSLDINPSDENTLNNLGNTYRLKGNIEDSIKCYKVCLEI 552
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 90/192 (46%), Gaps = 12/192 (6%)
Query: 126 SGLGTSSSSREEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEE 185
+GLG S + S++T L+ V + P + H+ LGL Y + G L+A + K+ E
Sbjct: 357 NGLGNSYRLNGQLDDSIQTILICV-KLNPNDDSYHYNLGLAYYQKGCFLEASQYFSKSLE 415
Query: 186 ILLRCEADIARPEL--LSLVQIHHA-----QCLLPESSGDNSL----DKELEPEELEEIL 234
I + + L L Q+ A Q L + +N+ + ++EE +
Sbjct: 416 INPKDSQTLYHYGLCCYELEQLDKAVSAFVQSLEYDPKNENTYYNLGQAYYDQNKIEESI 475
Query: 235 SKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQ 294
K ++ + ++ +N+LGL + G+L I+ L ++P++ + + NLG Y
Sbjct: 476 QCFKICLEINPNNSLYYNSLGLCFCQKGQLDEGIACFKKSLDINPSDENTLNNLGNTYRL 535
Query: 295 SGDMEQSAKCFQ 306
G++E S KC++
Sbjct: 536 KGNIEDSIKCYK 547
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 67/166 (40%), Gaps = 21/166 (12%)
Query: 237 LKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSG 296
+S++ + + + GL + +L ++S L DP N + NLG AY+
Sbjct: 410 FSKSLEINPKDSQTLYHYGLCCYELEQLDKAVSAFVQSLEYDPKNENTYYNLGQAYYDQN 469
Query: 297 DMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVA 356
+E+S +CF+ + + +P + Y +L G C Q ++
Sbjct: 470 KIEESIQCFKICL---EINPNNSLYYNSL------------------GLCFCQKGQLDEG 508
Query: 357 KECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 402
C +L +P + NL N Y L G+ S KC + ++ P
Sbjct: 509 IACFKKSLDINPSDENTLNNLGNTYRLKGNIEDSIKCYKVCLEINP 554
>gi|397780681|ref|YP_006545154.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
SEC [Methanoculleus bourgensis MS2]
gi|396939183|emb|CCJ36438.1| putative UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase SEC [Methanoculleus
bourgensis MS2]
Length = 276
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 114/299 (38%), Gaps = 52/299 (17%)
Query: 117 FGVDADGDQSGLGTSSSSREEKVSSLKTGLV--------HVARKMPKNAHAHFLLGLMYQ 168
FG D++G GT ++ + VS + G V + P+N G+ +
Sbjct: 8 FGKGEPEDRAGPGTDTAVSRQAVSLAQQGRFCEAIACFDRVLERDPENVKMWNNKGVFFD 67
Query: 169 RLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPE 228
LG+ +A++ +EKA I + D A P +S +H +
Sbjct: 68 LLGRDEEALACWEKALSI----DPDFA-PAWVSRGMLHRRR------------------N 104
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
L+E L ++ + AV W I RL +++ +LA+DP+ +L
Sbjct: 105 RLDEALVCYDRALALNPNSAVAWYNRSGIFTAMRRLDDAVACYERVLAIDPHFVAAWIDL 164
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLD 348
G A F E++ C+ I D + + S+ GA GE
Sbjct: 165 GYARFLQHRHEEAITCYDRAIADDPEN------------VRVWSLRGGALYALGE---YR 209
Query: 349 QASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 407
QA A C L DP+ A W+ + Y G +R + C +KA ++ P+C T
Sbjct: 210 QALA------CFDRVLSLDPRYAAGWSMKCSVLYHLGMYRHALACADKALEINPSCELT 262
>gi|145512772|ref|XP_001442298.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124409633|emb|CAK74901.1| unnamed protein product [Paramecium tetraurelia]
Length = 1421
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/305 (20%), Positives = 119/305 (39%), Gaps = 58/305 (19%)
Query: 143 KTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSL 202
K L + + P N A+ LGL+YQ Q L + + C +A + +
Sbjct: 1090 KKYLKYALKVSPNNPVANMRLGLIYQTKLQELNSA----------IECFQQVAIVDPTNY 1139
Query: 203 VQIHH-AQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKS 261
++ QC + EL+E + + +S++ + + W +G I+ +
Sbjct: 1140 KAYYYMGQCYFQKG-------------ELDEGIEYMNQSLKHNQSFGLAWKAVGNIMYEM 1186
Query: 262 GRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALIN 321
+ +++ + +D N+ + LG Y+ EQ+ + ++++ DQN
Sbjct: 1187 NQPATALRYFQKAIDLDKNDMEAKIRLGNCYYLQDQFEQAIQIYEEISHLDQNEELE--- 1243
Query: 322 YAALLLCKYGSVLAGAGANTGEGACLDQASAVNV-----------------------AKE 358
+ C Y N E A L A+++ A E
Sbjct: 1244 -QHMANCYYKK-------NDFEEAVLHYQRALSINSDKIECYYNLGDTYFTMEKFEEALE 1295
Query: 359 CLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKD 418
C +K DP+ + + N AN +++ D+ ++ K EKA +L+P + R VA IK
Sbjct: 1296 CFEKVVKNDPQHSAAFYNYANTFFVLEDYENAAKYFEKAIELQPQNVDWRNYVAQLYIKK 1355
Query: 419 AERSQ 423
+ +Q
Sbjct: 1356 CDLNQ 1360
>gi|94267075|ref|ZP_01290714.1| TPR repeat:Tetratricopeptide TPR_4 [delta proteobacterium MLMS-1]
gi|93452212|gb|EAT02868.1| TPR repeat:Tetratricopeptide TPR_4 [delta proteobacterium MLMS-1]
Length = 212
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 80/186 (43%), Gaps = 21/186 (11%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
ELE+I+++L++ + + L L+ K+GR+ +I+ L L +D + + + NL
Sbjct: 10 ELEKIIAELEQKCAELPDNVIAHHHLALVYRKAGRIDEAIARLEKCLQLDEHAKEPLINL 69
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLD 348
G YF+ GD+E++ + N A K LA A N G L
Sbjct: 70 GAIYFEQGDLERALEA---------NRRA----------VKVMPELAQAHTNI--GLILQ 108
Query: 349 QASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTR 408
Q A AL+ DPK + W N+A G+ + K +A KLEP
Sbjct: 109 QQGKFAEAVAAYEQALQHDPKQVNAWVNMATTQIADGNFELAAKAAREAIKLEPQFGMAH 168
Query: 409 YAVAVS 414
+AV+
Sbjct: 169 NNLAVA 174
Score = 38.5 bits (88), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 68/158 (43%), Gaps = 23/158 (14%)
Query: 152 KMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCL 211
++P N AH L L+Y++ G+ +A++ EK ++ + A+ L++L I+ Q
Sbjct: 24 ELPDNVIAHHHLALVYRKAGRIDEAIARLEKCLQL-----DEHAKEPLINLGAIYFEQ-- 76
Query: 212 LPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVL 271
GD LE L + +++ A +GLIL + G+ +++
Sbjct: 77 -----GD-----------LERALEANRRAVKVMPELAQAHTNIGLILQQQGKFAEAVAAY 120
Query: 272 SSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLI 309
L DP + N+ G+ E +AK ++ I
Sbjct: 121 EQALQHDPKQVNAWVNMATTQIADGNFELAAKAAREAI 158
>gi|146184699|ref|XP_001029949.2| SLEI family protein [Tetrahymena thermophila]
gi|146143045|gb|EAR82286.2| SLEI family protein [Tetrahymena thermophila SB210]
Length = 2342
Score = 59.3 bits (142), Expect = 4e-06, Method: Composition-based stats.
Identities = 63/275 (22%), Positives = 118/275 (42%), Gaps = 38/275 (13%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELL-SLVQIHHAQCLL 212
P AH+ GL Y++ +A+ SY+KA +I P+ L +L+++
Sbjct: 380 PDYYKAHYNSGLAYEKDNLIEEAIESYKKAIKI---------NPKFLKALIRL------- 423
Query: 213 PESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLS 272
GD +++E+ ++E + K+ +Q + +LG + L + +I
Sbjct: 424 ----GDICVEREM----IDEGIECFKKIVQLSPNSEYDFFSLGELYLTKKIYEEAIKCYK 475
Query: 273 SLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAAL----INYAALLLC 328
L ++P + NLG+AY +Q+ +C++ I D N+ A I+YA+ +
Sbjct: 476 KTLEINPQYIKALNNLGLAYEYQQMFDQAIECYKKAIEIDPNYHLAYYNCGISYASKKMV 535
Query: 329 K-----YGSVL----AGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLAN 379
Y VL A+T G Q + A EC +AL+ + + I NL
Sbjct: 536 DEAIECYKKVLEINPQYLNASTNMGYLYSQQKMYDKAIECYQSALQVNENSLKILNNLGY 595
Query: 380 AYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVS 414
AYY + H + + ++ +++P Y + V+
Sbjct: 596 AYYKSNMHDQAIEIYKRVIQIDPKSFLANYNIGVA 630
Score = 47.8 bits (112), Expect = 0.014, Method: Composition-based stats.
Identities = 92/461 (19%), Positives = 166/461 (36%), Gaps = 84/461 (18%)
Query: 133 SSREEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEA 192
S EE + LKT L P +A AH LG +Y++ A+ SY+ A E
Sbjct: 193 SMTEEAIRMLKTAL----EIDPNSAEAHERLGFIYEKQSMFDSALISYKIALE------- 241
Query: 193 DIARPELLS----LVQIHHAQCLLPESSGDNSLDKELEP----------------EELEE 232
P LS L I+ + L E+ E++P ++ EE
Sbjct: 242 --KNPNFLSVYISLAYIYFLKQLDQEAIKQLRKAIEIDPNFVQAYERLGFVFQNRKKYEE 299
Query: 233 ILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAY 292
+ K++++ D + LGL+ G+ S+ + +DP D NLG+ Y
Sbjct: 300 AIKNYKKAIELDPKYFNAQYNLGLLYYYQGKYNDSLLCYKKAIELDPKYVDAYNNLGLVY 359
Query: 293 FQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASA 352
F ++ + +Q + + ++ A Y S LA N E A A
Sbjct: 360 FGLDMNNEAIQYYQKALELNPDYYKA----------HYNSGLAYEKDNLIEEAIESYKKA 409
Query: 353 VNV-----------------------AKECLLAALKADPKAAHIWANLANAYYLTGDHRS 389
+ + EC ++ P + + + +L Y +
Sbjct: 410 IKINPKFLKALIRLGDICVEREMIDEGIECFKKIVQLSPNSEYDFFSLGELYLTKKIYEE 469
Query: 390 SGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQEPTEQLSWAGNEMASILREGDPVQIE 449
+ KC +K ++ P +Y A++ + A Q+ +Q +I ++I+
Sbjct: 470 AIKCYKKTLEINP-----QYIKALNNLGLAYEYQQMFDQ---------AIECYKKAIEID 515
Query: 450 PPIAWA----GFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKEC 505
P A G + K + A + E++ A Q + A EC
Sbjct: 516 PNYHLAYYNCGISYASKKMVDEAIECYKKVLEINPQYLNASTNMGYLYSQQKMYDKAIEC 575
Query: 506 LLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKVLMV 546
+AL+ + + I NL AYY + H + + ++V+ +
Sbjct: 576 YQSALQVNENSLKILNNLGYAYYKSNMHDQAIEIYKRVIQI 616
Score = 40.8 bits (94), Expect = 1.9, Method: Composition-based stats.
Identities = 64/330 (19%), Positives = 137/330 (41%), Gaps = 50/330 (15%)
Query: 225 LEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDC 284
L+ + ++ L K +++ + ++ V +N +GL+ ++ L +DPN
Sbjct: 1314 LDKHDNDQALECYKRALEINPKEIVAYNNIGLVYYNLKNSDQALEYYKKALEIDPNYELS 1373
Query: 285 IGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEG 344
I N G+AY Q E++ K + + + N +L L + K S+ N
Sbjct: 1374 IYNSGLAYEQKNQNEEALKYYNKVQQINPNEKKSL-----LRIQKINSL------NENFD 1422
Query: 345 ACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNC 404
+ + Q+ ++ +P+ A + YY+ S +CL+K+ +L+P
Sbjct: 1423 SKIQQS-------------IENNPQTAKDYYKQGFLYYVQMQDDKSIECLKKSVELDP-- 1467
Query: 405 MSTRYAVAVSRIKDAERSQEPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFAAVQKTH 464
Y A ++ + ++ E E +E ++I P + +++ + +
Sbjct: 1468 ---LYFEAYDKLGFVYQQKKMYE-------EALEYFKEA--IKINPK-CFNSISSIMRIY 1514
Query: 465 HEVAAAFETEE-----NELSKMEECAGAGE---SAFLDQASAVNVAKECLLAALKADPKA 516
E E +E NE++ +CA + + + DQ V+ A C A++ +P++
Sbjct: 1515 LEQKKIDEAKEYHKMINEMNP--DCAQTQQELGTVYQDQ-KMVDEAIACYQKAIELNPQS 1571
Query: 517 AHIWANLANAYYLTGDHRSSGKCLEKVLMV 546
+ L N+Y + + +C +KVL +
Sbjct: 1572 TSAYIELGNSYLGKVMYDKALECYKKVLEI 1601
Score = 39.3 bits (90), Expect = 5.0, Method: Composition-based stats.
Identities = 32/156 (20%), Positives = 66/156 (42%), Gaps = 23/156 (14%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 213
P+ A++ L ++YQ + +A+ Y+K ++ HA L
Sbjct: 719 PEYVQAYYYLAIIYQNTNRVDEAIDYYQKVIQL-----------------DPQHADAYL- 760
Query: 214 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 273
G+ L K L + LE ++++ + ++ +N +G I + ++
Sbjct: 761 -ELGNKYLHKNLTDKALE----CFYKTIEIEPKKYDAYNGVGAIFYAQKKDDQALEYFKK 815
Query: 274 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLI 309
L ++PN I N G+ Y Q G E++ +C++ +I
Sbjct: 816 ALEINPNYILSIYNSGLIYEQKGQSEKALECYKKVI 851
Score = 39.3 bits (90), Expect = 5.2, Method: Composition-based stats.
Identities = 35/156 (22%), Positives = 70/156 (44%), Gaps = 23/156 (14%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 213
PK + + GL+Y++ Q KA+ Y+K I + + R E ++
Sbjct: 1637 PKYELSIYNSGLIYEQKNQNDKALECYKKVLAINPTDKKTLTRIEKIN------------ 1684
Query: 214 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 273
+ +++ +L ++LEE L K+ + + QA ++ T+ +++ SI +L
Sbjct: 1685 ----EKNVNLKLSEKDLEEKLQKVPVTAKDHLEQAFLYLTIK-------KVEQSIELLKK 1733
Query: 274 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLI 309
+ +DPN D LG+ Y Q E + + ++ I
Sbjct: 1734 AIEIDPNYYDAYDKLGLIYKQKEMFEDAIQNYEKAI 1769
Score = 38.9 bits (89), Expect = 7.5, Method: Composition-based stats.
Identities = 78/397 (19%), Positives = 150/397 (37%), Gaps = 57/397 (14%)
Query: 164 GLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLDK 223
GL+Y+ Q KA+ Y K +I + + R E ++ +I + PE + +
Sbjct: 1104 GLVYEIQNQYEKALEYYNKVLKINPTEKKSLLRVEKIN-EKIGNINSEKPEETSKKEVQN 1162
Query: 224 ELEPE--------------ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSIS 269
L E E+ + L+++++ D ++ LGLI + G +I
Sbjct: 1163 TLSSAKEYYSKGYDFYAQMEDEKSIQCLQKAIEIDPNYYEAYDKLGLIYGEKGMFDEAIQ 1222
Query: 270 VLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCK 329
L ++P D I ++ YF +E++ + Q ++ + N L
Sbjct: 1223 NYLKALEINPKFFDIIPSIMNIYFDQNRIEEAKEFHQKIVDLNPNCTETLYEL------- 1275
Query: 330 YGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRS 389
G + ++ A EC LK DP+ L N Y D+
Sbjct: 1276 --------------GEVYQDQNMIDEAFECYQKILKIDPQYIDAHIELGNIYLDKHDNDQ 1321
Query: 390 SGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQEPTEQLSWAGNEMASILREGDPVQIE 449
+ +C ++A ++ P + VA + I + + ++Q E E DP E
Sbjct: 1322 ALECYKRALEINP-----KEIVAYNNIGLVYYNLKNSDQ----ALEYYKKALEIDP-NYE 1371
Query: 450 PPIAWAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKEC---- 505
I +G A QK +E A + + +++ E+ + L + +N E
Sbjct: 1372 LSIYNSGLAYEQKNQNEEALKYYNKVQQINPNEKKS-------LLRIQKINSLNENFDSK 1424
Query: 506 LLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEK 542
+ +++ +P+ A + YY+ S +CL+K
Sbjct: 1425 IQQSIENNPQTAKDYYKQGFLYYVQMQDDKSIECLKK 1461
Score = 38.9 bits (89), Expect = 7.7, Method: Composition-based stats.
Identities = 33/173 (19%), Positives = 69/173 (39%), Gaps = 19/173 (10%)
Query: 231 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 290
++ L ++ ++ DT+Q V +N +GL+ + ++ L ++P + N G+
Sbjct: 1861 DKALEVFQKILEIDTKQVVAYNNIGLVYYNQKKDDLALEYYQKALEINPKYLLSLYNSGL 1920
Query: 291 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQA 350
Y +++ +C+Q + + N L L L G D+
Sbjct: 1921 VYETKNQNDKALECYQKALDINPNDKQTLDRMMKLFL--------------KTGIIKDEF 1966
Query: 351 SAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 403
N L ++ + ++A+ + +Y S KCL KA +++PN
Sbjct: 1967 DVDN-----FLQKMEKNTQSAYDFYKQGYTFYSKKMKDQSIKCLNKAIEIDPN 2014
>gi|113476015|ref|YP_722076.1| hypothetical protein Tery_2383 [Trichodesmium erythraeum IMS101]
gi|110167063|gb|ABG51603.1| TPR repeat [Trichodesmium erythraeum IMS101]
Length = 1421
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 66/339 (19%), Positives = 139/339 (41%), Gaps = 37/339 (10%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
E E + ++++ D++ + ++ LG++ K+G Q +I+ + + ++PN + N
Sbjct: 943 EFNEAIELFSQALKVDSQDSQIYQNLGVVRFKAGDKQGAIADYNQAIKLNPNKPEAYYNR 1002
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYG-SVLAGAGANTGEGACL 347
GIAY G + + F ++ Q HP + Y + ++ + GA A+ + L
Sbjct: 1003 GIAYRFLGHNQDAMNDFTKVL---QLHPRVVDAYTQRGIVRFEVKDIEGAIADFNDAIKL 1059
Query: 348 DQASAVNVAKECLLAALKAD---------------PKAAHIWANLANAYYLTGDHRSSGK 392
+ + ++ L D PK + + + GDH + K
Sbjct: 1060 NPKHPEAIYNRAIIRRLTKDNQGSLDDLNKVIQLHPKYIDAYIKRSIVRFDLGDHEGALK 1119
Query: 393 CLEKAAKLEPNCMSTRYAVAVSRIKDAERSQEPTEQLSWAGNEMASILREGDPVQIEPPI 452
L+ A +L+PN Y A + +RS G+ +++I + +++ P
Sbjct: 1120 DLDSAVQLQPNNAEAYYQRA-----NTKRS---------MGDILSAIADFENAIRLNPKY 1165
Query: 453 --AWAGFAAVQKTHHEVAAAFETEENELSKMEECA-GAGESAFLD-QASAVNVAKECLLA 508
A+ V+ +++ A E E + A G F + + A + A
Sbjct: 1166 HQAYNDMGIVRLRRGDISGAMENFEAAIQINPNYAEGHNNRGFTKFRRGDIPGAMKDFEA 1225
Query: 509 ALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKVLMVY 547
A++ +P A + NL N+ + TGD + + + + L ++
Sbjct: 1226 AIQINPNYAEAYNNLGNSRFQTGDFQGAMRDFGETLRIH 1264
>gi|383319597|ref|YP_005380438.1| Tetratricopeptide repeat-containing protein [Methanocella conradii
HZ254]
gi|379320967|gb|AFC99919.1| Tetratricopeptide repeat-containing protein [Methanocella conradii
HZ254]
Length = 245
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/169 (21%), Positives = 70/169 (41%), Gaps = 21/169 (12%)
Query: 234 LSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYF 293
L ++++++ D +A W GL+ + G L ++ L L +DP + + G Y+
Sbjct: 56 LESIEKALELDPLRADAWFLKGLLFYQRGNLIKALGYLEQALDIDPRHAEAWCISGNCYY 115
Query: 294 QSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAV 353
GD +++ C++ I ++ +P A N +G L
Sbjct: 116 YIGDFQKAMDCYEATINIEREYPKAWYN---------------------KGVVLSDIRLY 154
Query: 354 NVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 402
N A +C AL+ +P A +W N + + + CL++A + P
Sbjct: 155 NEALQCYDEALRINPGVAVVWTNKGYCMAMLNKYEEALDCLDRALDINP 203
>gi|428223794|ref|YP_007107891.1| glycosyl transferase family protein [Geitlerinema sp. PCC 7407]
gi|427983695|gb|AFY64839.1| glycosyl transferase family 9 [Geitlerinema sp. PCC 7407]
Length = 2232
Score = 58.9 bits (141), Expect = 6e-06, Method: Composition-based stats.
Identities = 76/305 (24%), Positives = 118/305 (38%), Gaps = 45/305 (14%)
Query: 254 LGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQS-AKCFQDLILKD 312
LG++ ++GR Q +I++ LA+ PN + NLG+A ++GD+E + A C + + LK
Sbjct: 57 LGVLAYQTGRGQEAIALYRQALALKPNYAEVHSNLGVALKEAGDLEGAIAHCQRAVALKP 116
Query: 313 Q----------------NHPAALINY--AALLLCKYGSVLAGAGANTGEGACLDQASAVN 354
P A+ Y A L + L G N L Q +
Sbjct: 117 DYAGSYNNLGNALQAQGRIPEAIAAYRRAVELQPGFWEALGNLGNN------LRQQGQWS 170
Query: 355 VAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVS 414
A C AL+A P A W NL A+ G+ S +C E+A L P + ++
Sbjct: 171 EAMACYQQALQAQPTALDPWLNLGAAWREGGNWAESIRCYERAIALHPQAAEAHSGLGIT 230
Query: 415 RIKDAERSQEPTEQLSWAGNEMASILREGDPVQIEPPIAWA----GFA-AVQKTHHEVAA 469
+ AG +I + ++P A A G A +Q E A
Sbjct: 231 YKE--------------AGQLEGAIACYERAIALQPSFAEAHNNLGNAFQIQGRLQEAIA 276
Query: 470 AFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYL 529
++ + + A + L +A V A AL DP++ NL+ A L
Sbjct: 277 CYQQALTHQPRYVQ-AHSNLGVVLQEAGQVAAAIAQYRQALALDPESVDTHNNLSLALLL 335
Query: 530 TGDHR 534
TG R
Sbjct: 336 TGQLR 340
Score = 54.7 bits (130), Expect = 1e-04, Method: Composition-based stats.
Identities = 64/286 (22%), Positives = 116/286 (40%), Gaps = 49/286 (17%)
Query: 148 HVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHH 207
+ + P+N A LLG++ + G+ +A++ Y +A + +P + ++H
Sbjct: 42 QILAQQPQNLDALQLLGVLAYQTGRGQEAIALYRQALAL---------KP---NYAEVHS 89
Query: 208 AQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSS 267
+ + +GD LE ++ + ++ A +N LG L GR+ +
Sbjct: 90 NLGVALKEAGD-----------LEGAIAHCQRAVALKPDYAGSYNNLGNALQAQGRIPEA 138
Query: 268 ISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALI------- 320
I+ + + P + +GNLG Q G ++ C+Q + Q P AL
Sbjct: 139 IAAYRRAVELQPGFWEALGNLGNNLRQQGQWSEAMACYQQAL---QAQPTALDPWLNLGA 195
Query: 321 ------NYAALLLCKYGSVLA----GAGANTGEGACLDQASAVNVAKECLLAALKADPKA 370
N+A + C Y +A A A++G G +A + A C A+ P
Sbjct: 196 AWREGGNWAESIRC-YERAIALHPQAAEAHSGLGITYKEAGQLEGAIACYERAIALQPSF 254
Query: 371 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRI 416
A NL NA+ + G + + C ++A +P RY A S +
Sbjct: 255 AEAHNNLGNAFQIQGRLQEAIACYQQALTHQP-----RYVQAHSNL 295
Score = 46.2 bits (108), Expect = 0.043, Method: Composition-based stats.
Identities = 36/147 (24%), Positives = 67/147 (45%), Gaps = 23/147 (15%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 213
P+ A AH LG+ Y+ GQ A++ YE+A I L+ A L + QI
Sbjct: 218 PQAAEAHSGLGITYKEAGQLEGAIACYERA--IALQPSFAEAHNNLGNAFQIQG------ 269
Query: 214 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 273
L+E ++ ++++ R + LG++L ++G++ ++I+
Sbjct: 270 ---------------RLQEAIACYQQALTHQPRYVQAHSNLGVVLQEAGQVAAAIAQYRQ 314
Query: 274 LLAVDPNNCDCIGNLGIAYFQSGDMEQ 300
LA+DP + D NL +A +G + +
Sbjct: 315 ALALDPESVDTHNNLSLALLLTGQLRE 341
>gi|303326069|ref|ZP_07356512.1| TPR domain protein [Desulfovibrio sp. 3_1_syn3]
gi|302863985|gb|EFL86916.1| TPR domain protein [Desulfovibrio sp. 3_1_syn3]
Length = 252
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 51/100 (51%)
Query: 227 PEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIG 286
P EL + +++L++++ +D + A W LG + +G+ + +IS L P N D +
Sbjct: 113 PPELAQKIAELEKTLLADPKDAARWAALGNLYFDTGQAKQAISAYERSLTFAPGNPDVLT 172
Query: 287 NLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL 326
+LGI Y ++G EQ+ F+ H AL N +L
Sbjct: 173 DLGIMYREAGAYEQAVDSFRKASAARPGHENALFNEGVVL 212
>gi|345892965|ref|ZP_08843774.1| hypothetical protein HMPREF1022_02434 [Desulfovibrio sp.
6_1_46AFAA]
gi|345046770|gb|EGW50650.1| hypothetical protein HMPREF1022_02434 [Desulfovibrio sp.
6_1_46AFAA]
Length = 252
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 51/100 (51%)
Query: 227 PEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIG 286
P EL + +++L++++ +D + A W LG + +G+ + +IS L P N D +
Sbjct: 113 PPELAQKIAELEKTLLADPKDAARWAALGNLYFDTGQAKQAISAYERSLTFAPGNPDVLT 172
Query: 287 NLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL 326
+LGI Y ++G EQ+ F+ H AL N +L
Sbjct: 173 DLGIMYREAGAYEQAVDSFRKASAARPGHENALFNEGVVL 212
>gi|220922903|ref|YP_002498205.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium
nodulans ORS 2060]
gi|219947510|gb|ACL57902.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium
nodulans ORS 2060]
Length = 784
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 89/384 (23%), Positives = 141/384 (36%), Gaps = 62/384 (16%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 213
PK+A A+ GL + R G+ +A++ Y++A LR + A I+ + L
Sbjct: 57 PKSAVAYTHRGLAFYRKGEYDRAIADYDQA----LRLDPKYA--------NIYINRGLAF 104
Query: 214 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 273
G E + ++ ++++ D R AVV+ G G +I+
Sbjct: 105 YRKG-----------EYDRAIADYDQALRLDLRDAVVYTNRGDAFRSKGEYDRAIADYDQ 153
Query: 274 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSV 333
L +P AY GD QS K D + D +H AL L
Sbjct: 154 ALRFNPK-------YAYAYRNRGDAFQS-KGEYDRAIADYDH--------ALRLNP---- 193
Query: 334 LAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKC 393
A A T G S + A AL+ DPK A+I+ N A+ G++ +
Sbjct: 194 -EDAAAYTHRGLAFQSKSEYDRAIADYDQALRFDPKYANIYINRGYAFRSKGEYNRAIAD 252
Query: 394 LEKAAKLEPNCMSTRYAVAVSRIKDAERSQEPTEQLSWAGNEMASILREGDPVQIEPPIA 453
++A +L+P + +A + DA RS+ G +I ++ P A
Sbjct: 253 FDQALRLDPKSV-----IAYTGRGDAFRSK---------GENDRAIADYDQALRFNPKYA 298
Query: 454 WA----GFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAA 509
+A G A K ++ A A L A + A A
Sbjct: 299 YAYRNRGDAFRNKGEYDRAIADYDHALRLDPKSATAYNNRGLAFQNKGEYDRAIADYDQA 358
Query: 510 LKADPKAAHIWANLANAYYLTGDH 533
L+ DPK A + N A+Y G+H
Sbjct: 359 LRLDPKDAAAYTNRGAAFYRKGEH 382
Score = 45.1 bits (105), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 59/287 (20%), Positives = 107/287 (37%), Gaps = 40/287 (13%)
Query: 148 HVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEI-------------LLRCEADI 194
H R P++A A+ GL +Q + +A++ Y++A R + +
Sbjct: 187 HALRLNPEDAAAYTHRGLAFQSKSEYDRAIADYDQALRFDPKYANIYINRGYAFRSKGEY 246
Query: 195 ARPELLSLVQIHHAQCLLPES------SGDNSLDKELEPEELEEILSKLKESMQSDTRQA 248
R ++ A L P+S GD K E + ++ ++++ + + A
Sbjct: 247 NR----AIADFDQALRLDPKSVIAYTGRGDAFRSKG----ENDRAIADYDQALRFNPKYA 298
Query: 249 VVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDL 308
+ G G +I+ L +DP + N G+A+ G+ +++ +
Sbjct: 299 YAYRNRGDAFRNKGEYDRAIADYDHALRLDPKSATAYNNRGLAFQNKGEYDRAIADYDQA 358
Query: 309 ILKDQNHPAALINYAALLLCK---------YGSVL----AGAGANTGEGACLDQASAVNV 355
+ D AA N A K Y L A A G GA L++ +
Sbjct: 359 LRLDPKDAAAYTNRGAAFYRKGEHDRAIADYDEALRLDPKSAAAYNGRGAALNKKGEYDR 418
Query: 356 AKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 402
A L AL+ P A+ + + A+ GD + L +A +L P
Sbjct: 419 AIADLDQALRLKPGFANPYCHRGTAFRHKGDLDRALAELNEAVRLNP 465
>gi|145553124|ref|XP_001462237.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124430075|emb|CAK94864.1| unnamed protein product [Paramecium tetraurelia]
Length = 2950
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/287 (20%), Positives = 111/287 (38%), Gaps = 44/287 (15%)
Query: 143 KTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSL 202
K L H + P N A+ LG +YQ L + + C A ++R + +
Sbjct: 2619 KKYLKHALKSSPNNPVANMRLGRIYQTKLNELNSA----------IECFAKVSRVDPTNY 2668
Query: 203 VQIHH-AQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKS 261
++ QC + + EL + + + S++ + + W +G I+ +
Sbjct: 2669 KAYYYMGQCYIQKG-------------ELNKGIENMNMSLKHNQSFGLAWKAVGNIMYEK 2715
Query: 262 GRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHP----- 316
+ ++ + D N+ + LG Y+ EQ+ + ++++ DQN
Sbjct: 2716 NQPAKALRYFQKAIDSDKNDMEAKIGLGNCYYLQEQFEQAIQIYEEISHLDQNEELEYNM 2775
Query: 317 -----------AALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALK 365
A+++Y L + N G C+ A EC +K
Sbjct: 2776 ANCYYMKNDFEEAVLHYQKALSINPDKI--ECYYNLGNTYCI--MEKFEEALECFERVVK 2831
Query: 366 ADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVA 412
DPK + + N AN +++ D+ ++ K EKA +L+P + R VA
Sbjct: 2832 DDPKHSAAFYNYANTFFVLQDYENAAKYFEKAVELQPENVDWRNYVA 2878
>gi|406661890|ref|ZP_11070000.1| TPR repeat-containing protein yrrB [Cecembia lonarensis LW9]
gi|405554248|gb|EKB49358.1| TPR repeat-containing protein yrrB [Cecembia lonarensis LW9]
Length = 471
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 63/290 (21%), Positives = 113/290 (38%), Gaps = 49/290 (16%)
Query: 157 AHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESS 216
A H+LLG +++ + +A+ Y++ +I + E +L Q+ ++ E
Sbjct: 135 AEVHYLLGNLFRSENKTDQAIYHYKECVKIRINHED--------ALFQL----AMITEED 182
Query: 217 GDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLA 276
G EIL +E + D A W LG++ + GR + +I L
Sbjct: 183 GS-----------FNEILQFYQEFIDQDPYSAGAWYNLGVVYNRLGRYEDAIKAYDYALI 231
Query: 277 VDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLI-------------------LKDQNHPA 317
+D + NLG AY + +Q+ + +Q+ I L +
Sbjct: 232 IDESFASAYFNLGNAYMNTQQYDQALEAYQNTINCEGANAENCCYLGAAYEKLDQIDMAF 291
Query: 318 ALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANL 377
+A L +Y A G G C+ + S A A+K + + W L
Sbjct: 292 KYFKKSAKLDPEYDD------AWFGLGMCMLKKSKYFEAIHYFKKAIKLTEENPNYWVGL 345
Query: 378 ANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQEPTE 427
A+A Y G+ ++S + E+A LEP + T +++ D R +E +
Sbjct: 346 ADAEYQLGNLQASAEAYEEAINLEPGIVETYINLSIIYF-DQNRFEETID 394
>gi|386813211|ref|ZP_10100435.1| conserved hypothetical protein [planctomycete KSU-1]
gi|386814261|ref|ZP_10101485.1| conserved hypothetical protein [planctomycete KSU-1]
gi|386402708|dbj|GAB63316.1| conserved hypothetical protein [planctomycete KSU-1]
gi|386403758|dbj|GAB64366.1| conserved hypothetical protein [planctomycete KSU-1]
Length = 254
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 87/200 (43%), Gaps = 26/200 (13%)
Query: 230 LEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLG 289
+EE +++ K++++ D +N LG++ +GRL ++ L + + P + NLG
Sbjct: 64 MEEAINEYKKTLEIDPNFVKAYNNLGVVYHNAGRLDEAVGSLKKAVELSPQYVEAYYNLG 123
Query: 290 IAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQ 349
IAY++ +A F+ + + +PA Y L G
Sbjct: 124 IAYYKKKQYNDAAGAFEKAV---EFNPAFDKGYYNL------------------GIVYSS 162
Query: 350 ASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRY 409
++ A + A + +PK ++ + NL Y + + + L+KA +L PN + +
Sbjct: 163 MDNLDEAIDAFKKATEINPKYSNAYYNLGVTYAKKDHYDDAIQSLQKALELNPNNYNAHF 222
Query: 410 AVAV-----SRIKDAERSQE 424
A+ V + K+A S++
Sbjct: 223 ALGVIHQTKRKTKEANESRD 242
Score = 42.0 bits (97), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 73/175 (41%), Gaps = 33/175 (18%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELL----SLVQIHHAQ 209
P +A AH+ LG++Y G +A++ Y+K EI P + +L ++H
Sbjct: 45 PNSAEAHYNLGIVYHEKGMMEEAINEYKKTLEI---------DPNFVKAYNNLGVVYHNA 95
Query: 210 CLLPESSGDNSLDK--ELEPEELEEI----LSKLKESMQSDT----RQAVVWN------- 252
L E+ G SL K EL P+ +E ++ K+ +D +AV +N
Sbjct: 96 GRLDEAVG--SLKKAVELSPQYVEAYYNLGIAYYKKKQYNDAAGAFEKAVEFNPAFDKGY 153
Query: 253 -TLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQ 306
LG++ L +I ++P + NLG+ Y + + + + Q
Sbjct: 154 YNLGIVYSSMDNLDEAIDAFKKATEINPKYSNAYYNLGVTYAKKDHYDDAIQSLQ 208
>gi|218246150|ref|YP_002371521.1| hypothetical protein PCC8801_1300 [Cyanothece sp. PCC 8801]
gi|218166628|gb|ACK65365.1| TPR repeat-containing protein [Cyanothece sp. PCC 8801]
Length = 878
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 83/191 (43%), Gaps = 17/191 (8%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
+L+E ++ ++++Q + A +N LG L G+L+ +I+ + ++PN D NL
Sbjct: 78 KLDEAIAAYQKAIQLNPNDADAYNNLGNALSDQGKLEEAIAAYQKAIQLNPNYADAYYNL 137
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL---------LCKYGSVL----- 334
GIA G +E++ +Q I + N A N L + Y +
Sbjct: 138 GIALSDQGKLEEAIAAYQKAIQLNPNFTQAYYNLGIALSDQGKLEEAIAAYQKAIQLNPN 197
Query: 335 -AGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKC 393
A A N G A DQ ++ A A++ DP A+ + NL A Y G +
Sbjct: 198 YADAYYNLGN-ALFDQGK-LDEAIAAYQKAIQLDPNDANAYNNLGAALYKQGKLEEAIAA 255
Query: 394 LEKAAKLEPNC 404
+KA +L PN
Sbjct: 256 YQKAIQLNPNL 266
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 82/193 (42%), Gaps = 26/193 (13%)
Query: 231 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 290
+E ++ ++++Q D A +N LGL L G+ +I+ + ++PN NLG
Sbjct: 420 DEAIAAYQKAIQLDPNDANAYNNLGLALRNQGKRDEAITAYQKAIQLNPNFALAYNNLGN 479
Query: 291 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQA 350
A + G E++ +Q I + N AL G+ L+ G D+A
Sbjct: 480 ALYSQGKREEAIAAYQKAIQLNPNF--------ALAYNNLGNALSDQGKR-------DEA 524
Query: 351 SAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYA 410
A A++ +P A + NL NA G + +KA +L PN +A
Sbjct: 525 IA------AYQKAIQLNPNFALAYNNLGNALSDQGKLNEAIATYQKAIQLNPN-----FA 573
Query: 411 VAVSRIKDAERSQ 423
+A + + +A + Q
Sbjct: 574 LAYNNLGNALKDQ 586
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 83/397 (20%), Positives = 150/397 (37%), Gaps = 62/397 (15%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 213
P A++ LG+ G+ +A+++Y+KA +Q++
Sbjct: 162 PNFTQAYYNLGIALSDQGKLEEAIAAYQKA-------------------IQLNPNYADAY 202
Query: 214 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 273
+ G+ D+ +L+E ++ ++++Q D A +N LG L K G+L+ +I+
Sbjct: 203 YNLGNALFDQG----KLDEAIAAYQKAIQLDPNDANAYNNLGAALYKQGKLEEAIAAYQK 258
Query: 274 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSV 333
+ ++PN + NLG+A G +++ +Q I + N
Sbjct: 259 AIQLNPNLAEAYNNLGVALSDQGKRDEAIAAYQKAIQLNPN------------------- 299
Query: 334 LAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKC 393
LA A N G L + A A++ +P A + NL A G +
Sbjct: 300 LAEAYNNL--GVALSDQGKRDEAIAAYQKAIQLNPNFALAYNNLGVALSDQGKRDEAIAA 357
Query: 394 LEKAAKLEPNCMSTRYAVAVSRIKDAERSQEPTEQLSWAGNEMASILREGDPVQIEPPIA 453
+KA +L PN +A+A + + A LS G +I +Q+ P A
Sbjct: 358 YQKAIQLNPN-----FALAYNNLGVA---------LSDQGKRDEAIAAYQKAIQLNPNFA 403
Query: 454 WA----GFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAA 509
A G A + + A A + +L + A L + A A
Sbjct: 404 LAYNNLGVALRNQGKRDEAIAAYQKAIQLDPNDANAYNNLGLALRNQGKRDEAITAYQKA 463
Query: 510 LKADPKAAHIWANLANAYYLTGDHRSSGKCLEKVLMV 546
++ +P A + NL NA Y G + +K + +
Sbjct: 464 IQLNPNFALAYNNLGNALYSQGKREEAIAAYQKAIQL 500
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 71/180 (39%), Gaps = 13/180 (7%)
Query: 237 LKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSG 296
+ ++ D A +N LG L G+L +I+ + ++PN+ D NLG A G
Sbjct: 52 FRRVIELDPNLADAYNNLGNALYYQGKLDEAIAAYQKAIQLNPNDADAYNNLGNALSDQG 111
Query: 297 DMEQSAKCFQDLILKDQNHPAALINYAALL---------LCKYGSVLA----GAGANTGE 343
+E++ +Q I + N+ A N L + Y + A
Sbjct: 112 KLEEAIAAYQKAIQLNPNYADAYYNLGIALSDQGKLEEAIAAYQKAIQLNPNFTQAYYNL 171
Query: 344 GACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 403
G L + A A++ +P A + NL NA + G + +KA +L+PN
Sbjct: 172 GIALSDQGKLEEAIAAYQKAIQLNPNYADAYYNLGNALFDQGKLDEAIAAYQKAIQLDPN 231
Score = 46.2 bits (108), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 68/316 (21%), Positives = 123/316 (38%), Gaps = 52/316 (16%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 213
P A A+ LG+ G+ +A+++Y+KA ++ P L
Sbjct: 264 PNLAEAYNNLGVALSDQGKRDEAIAAYQKAIQL---------NPNL-------------- 300
Query: 214 ESSGDNSLDKELEPE-ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLS 272
+ N+L L + + +E ++ ++++Q + A+ +N LG+ L G+ +I+
Sbjct: 301 -AEAYNNLGVALSDQGKRDEAIAAYQKAIQLNPNFALAYNNLGVALSDQGKRDEAIAAYQ 359
Query: 273 SLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL------ 326
+ ++PN NLG+A G +++ +Q I + N A N L
Sbjct: 360 KAIQLNPNFALAYNNLGVALSDQGKRDEAIAAYQKAIQLNPNFALAYNNLGVALRNQGKR 419
Query: 327 ---LCKYGSVLA----GAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLAN 379
+ Y + A A G L + A A++ +P A + NL N
Sbjct: 420 DEAIAAYQKAIQLDPNDANAYNNLGLALRNQGKRDEAITAYQKAIQLNPNFALAYNNLGN 479
Query: 380 AYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQEPTEQLSWAGNEMASI 439
A Y G + +KA +L PN +A+A + + +A LS G +I
Sbjct: 480 ALYSQGKREEAIAAYQKAIQLNPN-----FALAYNNLGNA---------LSDQGKRDEAI 525
Query: 440 LREGDPVQIEPPIAWA 455
+Q+ P A A
Sbjct: 526 AAYQKAIQLNPNFALA 541
Score = 39.3 bits (90), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 122/297 (41%), Gaps = 52/297 (17%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 213
P +A+A+ LGL + G+ +A+++Y+KA +Q++ L
Sbjct: 434 PNDANAYNNLGLALRNQGKRDEAITAYQKA-------------------IQLNPNFALAY 474
Query: 214 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 273
+ G N+L + + EE ++ ++++Q + A+ +N LG L G+ +I+
Sbjct: 475 NNLG-NALYSQ---GKREEAIAAYQKAIQLNPNFALAYNNLGNALSDQGKRDEAIAAYQK 530
Query: 274 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSV 333
+ ++PN NLG A G + ++ +Q I + N AL G+
Sbjct: 531 AIQLNPNFALAYNNLGNALSDQGKLNEAIATYQKAIQLNPNF--------ALAYNNLGNA 582
Query: 334 LAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWA--NLANAYYLTGDHRSSG 391
L G L++A A L P AH A NL Y G +
Sbjct: 583 LKDQGK-------LNEAIAAYQKALSLPEDTSVTPTTAHTLAHNNLGLVYQPQGKLEEAL 635
Query: 392 KCLEKAAKLEPNCMSTRYAVAVSRIKDAERS--QEPTEQLSWAGNEMASILREGDPV 446
+ E A K++P YA+ + +DA + ++PTE L++ N + L DP
Sbjct: 636 REYEAALKIDPKF---EYAI---KNRDAVLALLKQPTE-LAYTTN---NYLPSDDPF 682
>gi|427734378|ref|YP_007053922.1| Flp pilus assembly protein TadD [Rivularia sp. PCC 7116]
gi|427369419|gb|AFY53375.1| Flp pilus assembly protein TadD [Rivularia sp. PCC 7116]
Length = 370
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 82/188 (43%), Gaps = 13/188 (6%)
Query: 225 LEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDC 284
L+ L+ + + E+++ + A + LGL L K G+ +++I+ L V+P +
Sbjct: 100 LQQNRLDAAVQEYGEAIRLNPNLAEAYYNLGLALHKQGQNEAAITAYRQALVVEPTMANA 159
Query: 285 IGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINY---------AALLLCKYGSVLA 335
NLG+A +Q G E++ +Q I D+N+ A N AA + Y VL
Sbjct: 160 NYNLGLALYQQGQTEEAIAAYQQSINLDRNNANAYFNLGLALQEQGDAAKAIIAYREVLQ 219
Query: 336 ----GAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSG 391
A A G L A E + A++ P + L A+Y G+++ +
Sbjct: 220 LSPNNAAAYNNLGNLLVARGQTPEAIETYIQAIRKVPNNPSAYYKLGVAFYKQGEYKKAQ 279
Query: 392 KCLEKAAK 399
+ L +A K
Sbjct: 280 QVLRRAHK 287
>gi|404449456|ref|ZP_11014446.1| hypothetical protein A33Q_08997 [Indibacter alkaliphilus LW1]
gi|403765144|gb|EJZ26029.1| hypothetical protein A33Q_08997 [Indibacter alkaliphilus LW1]
Length = 471
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 109/285 (38%), Gaps = 39/285 (13%)
Query: 157 AHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESS 216
A H+LLG +Y+ KA+ Y++ + LR + A +L ++ E
Sbjct: 135 AEVHYLLGNLYRAENDSEKAIFHYKQC--VKLRINHEDALFQL----------AMITEEE 182
Query: 217 GDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLA 276
G +EIL +E + D A W +G++ + GR + +I L
Sbjct: 183 GS-----------FDEILIFYQEFIDQDPYSAGAWYNMGVVYNRLGRYEEAIQAYDYALI 231
Query: 277 VDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAG 336
+D + NLG AY + E + + +Q+ I + A Y A K G +
Sbjct: 232 IDDSFASAYFNLGNAYMNTEQFELALEAYQNTI-NCEGANAENCCYLAAAYEKMGQIDMA 290
Query: 337 A--------------GANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYY 382
A G G C+ + A A+K A W LA+A Y
Sbjct: 291 FKYFKKSAKLDPEYDDAWFGLGMCMLKKEKFFEAIHYFRKAIKLCNDNATYWVGLADAEY 350
Query: 383 LTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQEPTE 427
G+ ++S + E+A LEP M T +A+ D R +E +
Sbjct: 351 NLGNLQASSEAYEEAINLEPGIMETYVNLAIIYF-DQNRFEETVD 394
>gi|134045937|ref|YP_001097423.1| hypothetical protein MmarC5_0901 [Methanococcus maripaludis C5]
gi|132663562|gb|ABO35208.1| TPR repeat-containing protein [Methanococcus maripaludis C5]
Length = 409
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 62/326 (19%), Positives = 113/326 (34%), Gaps = 45/326 (13%)
Query: 228 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 287
EE E+ L +S++ D W G+ L G SI
Sbjct: 106 EEYEKALYYFNKSLEIDNSIGKTWFYKGICLKMLGNYDESIESFDKSTGNYEEIVLIWNE 165
Query: 288 LGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL 347
LG Y+Q+ + E++ +CF +L ++N + G+G C
Sbjct: 166 LGYIYYQNEEYEKALECFDKALLLNRNLKYSF---------------------NGKGLCY 204
Query: 348 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLE---PNC 404
++ +A EC AL D W N YY ++ S+ C +KA +L P+C
Sbjct: 205 EKKEQYLLAIECFDKALLQDSFYYGAWHNKGIEYYKLKNYSSAVLCFDKALELNNSSPHC 264
Query: 405 MSTRYAVAVSRIKDAERSQEPTEQLSWAGNEMASILREGDPVQIEP--PIAWAGFAAVQK 462
+ + L G ++L Q++P P+ W+G
Sbjct: 265 YFYK-----------------ADSLKCLGEYEKAVLNYKKATQLDPENPVFWSGMGLSYS 307
Query: 463 THHEVAAAFETEEN--ELSKMEECAGAGESAFLDQASAVNVAKECLLAALKADPKAAHIW 520
+ + E E EL+ ++ + N + AL+ + + + W
Sbjct: 308 YLKDYNRSIEAYEKAVELTPNDDVLWSNIGYLQYNNKNYNESISYFEKALELNSENKYAW 367
Query: 521 ANLANAYYLTGDHRSSGKCLEKVLMV 546
L N+Y L ++ + C + + +
Sbjct: 368 NGLGNSYLLIKNYEKAVLCYNRAIEI 393
>gi|327401541|ref|YP_004342380.1| hypothetical protein Arcve_1665 [Archaeoglobus veneficus SNP6]
gi|327317049|gb|AEA47665.1| Tetratricopeptide TPR_1 repeat-containing protein [Archaeoglobus
veneficus SNP6]
Length = 222
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 54/92 (58%)
Query: 230 LEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLG 289
++E +S + +++ + A W G++L +G+ +I+ +A++P++ N+G
Sbjct: 52 IDEAISYIDRALELNPDYADAWYNRGIVLSDAGKYDEAIACFEKAIALNPDDAAAWNNMG 111
Query: 290 IAYFQSGDMEQSAKCFQDLILKDQNHPAALIN 321
+AY++SG+M ++ +C++ + D+ H AA N
Sbjct: 112 LAYYESGNMGKAIECYRKCVSIDEEHAAAWYN 143
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 76/175 (43%), Gaps = 24/175 (13%)
Query: 227 PEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIG 286
PEE E SK ++ + V N LG+ L + GR+ +IS + L ++P+ D
Sbjct: 18 PEEEVEFFSK---CLEMEPENIYVLNNLGIALYELGRIDEAISYIDRALELNPDYADAWY 74
Query: 287 NLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGAC 346
N GI +G +++ CF+ I + + AA N + L Y S N G+
Sbjct: 75 NRGIVLSDAGKYDEAIACFEKAIALNPDDAAAWNN---MGLAYYES------GNMGK--- 122
Query: 347 LDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLE 401
A EC + D + A W N+ AYY +G + + +KA +L+
Sbjct: 123 ---------AIECYRKCVSIDEEHAAAWYNMGLAYYESGRFNKAEESFKKALELD 168
>gi|302391517|ref|YP_003827337.1| hypothetical protein [Acetohalobium arabaticum DSM 5501]
gi|302203594|gb|ADL12272.1| Tetratricopeptide TPR_2 repeat protein [Acetohalobium arabaticum
DSM 5501]
Length = 251
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 103/223 (46%), Gaps = 28/223 (12%)
Query: 126 SGLGTSSSSREEKVSSLKTGLVHV-----ARKMPKNA----------HAHFLLGLMYQRL 170
+G ++SS ++VS+ K GL H +PK A + H++LGL Y RL
Sbjct: 21 TGFVATASSSNKEVSNYKLGLKHFRAGDYQSAVPKLAAAISENPDLMYPHYILGLTYYRL 80
Query: 171 GQPLKAVSSYEKAEEIL---LRCEADIARPELLSLVQIHHA-----QCLLPESSGDNSLD 222
+ A + +KA EI R ++ R L +I A Q + D++ +
Sbjct: 81 DKYKFAETQLKKAHEIKPEHYRVMVNLGRV-YLKQDKIDQAIEITKQAIETNQKIDDAYN 139
Query: 223 ----KELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVD 278
+ E+++E + K++++ + V N LG +++ + + +ISVL +A++
Sbjct: 140 VLGRAYRKAEKIKEAIDSFKKAVELNDENYYVLNNLGYTYIQTNQYKEAISVLKQAVALN 199
Query: 279 PNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALIN 321
P NLG AY +++++ K +++ + D + A +N
Sbjct: 200 PGIPYLYNNLGFAYENVDELKKAKKAYEEALAVDSTYQKAEVN 242
>gi|110636430|ref|YP_676637.1| TPR repeat-containing protein [Cytophaga hutchinsonii ATCC 33406]
gi|110279111|gb|ABG57297.1| TPR repeat containing protein [Cytophaga hutchinsonii ATCC 33406]
Length = 466
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 109/260 (41%), Gaps = 44/260 (16%)
Query: 160 HFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESSGDN 219
H+ +G++YQ +G ++++ ++A I+L + + A EL +++
Sbjct: 137 HYHMGVIYQDMGNFEESINHLKEA--IMLNSQHEDAIYELSYSLEV-------------- 180
Query: 220 SLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDP 279
LD+ LEE + K+ ++ D W LG+ K G+L ++ ++A++
Sbjct: 181 -LDR------LEESIDFFKQLIEKDPYSHFAWFCLGVSYFKQGKLDEALDAYEFVIAIND 233
Query: 280 NNCDCIGNLGIAY-------------FQSGDME-QSAKCFQDLILKDQN---HPAALINY 322
N+G Y FQ+ DME ++A F ++ ++ HP A+ Y
Sbjct: 234 KYSSAYYNIGECYVYKNEYEKALEYFFQTMDMEDKTADVFYNIGFCYEHLGMHPKAIEFY 293
Query: 323 AALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYY 382
K + A G G CL+ + ALK D A W ANA Y
Sbjct: 294 RK--ASKADAYF--HEAYYGIGKCLEAQDKSYESIHFFKRALKLDEANAEYWLAKANAEY 349
Query: 383 LTGDHRSSGKCLEKAAKLEP 402
TG+ SS + E+A LEP
Sbjct: 350 KTGNIISSLEAFEEACVLEP 369
>gi|374851919|dbj|BAL54865.1| tetratricopeptide repeat domain protein [uncultured Acidobacteria
bacterium]
Length = 1230
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 106/249 (42%), Gaps = 27/249 (10%)
Query: 94 GKKINKLGKCRSRISSKMDSALEFGVDADGDQSGLGTSSSSREEKVSSLKTGLVHVARKM 153
G + + G+ I++ + + G + G LG + + E +++ +A++
Sbjct: 82 GMALARRGELEEAIAAYERAIEQTGGNHPGAYHNLGLALFGKGEVERAIEAFRQAIAQRG 141
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 213
AHF LG G+ +A+++Y A E ++ P+ IH L
Sbjct: 142 GVFPRAHFHLGFALAHTGRIEEAIAAYRTAIE-----QSGGHSPD------IHFQLGWLL 190
Query: 214 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVV---WNTLGLILLKSGRLQSSISV 270
GD LEE + + ++ + R V LG LL GRL+ +I+
Sbjct: 191 MGKGD-----------LEEAIEAFRTAI--EQRGGVYPEAQYELGRALLARGRLEEAITT 237
Query: 271 LSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKY 330
+LL V+PN+ + NLG AY + GD+E + + + I + + AA + LLL +
Sbjct: 238 FRTLLQVNPNHPEAYFNLGRAYLRQGDLEAAREALETAIRQRGGNFAAAHHQLGLLLAQQ 297
Query: 331 GSVLAGAGA 339
G V A A
Sbjct: 298 GDVEQAAAA 306
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 93/208 (44%), Gaps = 30/208 (14%)
Query: 128 LGTSSSSR---EEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAE 184
LG + +R E+ +++ +T + H P AH+ LGL G+ +A +++ +A
Sbjct: 740 LGNAYFARGDLEQAIAAYRTAIEH----KPDFGQAHYRLGLALWERGEVAEARAAFHRAI 795
Query: 185 EILLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSD 244
E+ E + Q +++ ++ LE EL+ L L++++
Sbjct: 796 EV-----------EPQAFPQAYYSLGVML-----------LEHGELDAALEALRQAIAQC 833
Query: 245 TRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNC-DCIGNLGIAYFQSGDMEQSAK 303
+ + +LG + L GR++ +IS + + + + NLG AY + GD+ ++ +
Sbjct: 834 ELFPLAYYSLGNVFLAQGRIEDAISAYRTAIEQSSGRFPEALWNLGNAYVRQGDITRAIE 893
Query: 304 CFQDLILKDQNHPAALINYAALLLCKYG 331
++ I + AL + L+L + G
Sbjct: 894 AYRQAIEQTGGRDPALHHNLGLVLLQAG 921
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 63/317 (19%), Positives = 121/317 (38%), Gaps = 46/317 (14%)
Query: 225 LEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDC 284
L+ E E + L+++++ ++ LG LL GR++ +I LA+ P+
Sbjct: 608 LDAGEWEGAIQSLRQAIEQQPEFPEAYDHLGRALLHLGRVEEAIEAYRQALALRPDFVHA 667
Query: 285 IGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEG 344
LG+A + +G+++++ + + + + P A +
Sbjct: 668 YHGLGVALYLNGELDEAIRALERALELKPDLPRAHHDLGV-------------------- 707
Query: 345 ACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNC 404
A LD+ A A + +L NAY+ GD + A + +P+
Sbjct: 708 ALLDRGEIERAIAAFQAAIQTAGRPYPEGYYDLGNAYFARGDLEQAIAAYRTAIEHKPDF 767
Query: 405 MSTRYAVAVSRIKDAERSQEPTEQLSWAGNEMASILREGDPVQIEP---PIAWAGFAAVQ 461
Y + ++ + E ++ A+ R +++EP P A+ +
Sbjct: 768 GQAHYRLGLALWERGEVAE-----------ARAAFHR---AIEVEPQAFPQAYYSLGVML 813
Query: 462 KTHHEVAAAFETEENELSKMEECAGAGES---AFLDQAS---AVNVAKECLLAALKADPK 515
H E+ AA E +++ E A S FL Q A++ + + + P+
Sbjct: 814 LEHGELDAALEALRQAIAQCELFPLAYYSLGNVFLAQGRIEDAISAYRTAIEQSSGRFPE 873
Query: 516 AAHIWANLANAYYLTGD 532
A +W NL NAY GD
Sbjct: 874 A--LW-NLGNAYVRQGD 887
>gi|113475981|ref|YP_722042.1| hypothetical protein Tery_2349 [Trichodesmium erythraeum IMS101]
gi|110167029|gb|ABG51569.1| TPR repeat [Trichodesmium erythraeum IMS101]
Length = 649
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 71/348 (20%), Positives = 134/348 (38%), Gaps = 53/348 (15%)
Query: 222 DKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNN 281
DK + EE E+ L+ +++Q + + A +N G++ K G+ +++ L+ + ++P
Sbjct: 298 DKHHDREEFEQALADYNQAIQLNPKYADAYNNRGIVYRKQGKYDLALADLNQAIQLNPKY 357
Query: 282 CDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANT 341
D N G Y+ G DL L D N A L KY A A
Sbjct: 358 ADAYKNRGNVYYNQGKY--------DLALADYNQ-------AIQLNPKY------AEAYN 396
Query: 342 GEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLE 401
G D ++A A++ +PK A+ + N Y G + + +A +L
Sbjct: 397 NRGLVYDDQGKYDLAIAEFNQAIQLNPKYAYAYNNRGVVYDDQGKYDLALADYNQAIQLN 456
Query: 402 PN---CMSTRYAVAVSR------IKDAERSQEPTEQLSWAGNEMASILRE---------- 442
P + R V + + I D ++ + +L+ A N ++ R+
Sbjct: 457 PKYAEAYNNRGGVYLEQGKYDLAIADYNQAIQLNPKLAEAYNNRGAVYRKQGKYDLALAD 516
Query: 443 -GDPVQIEPPIAW-----AGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQA 496
+ +++ P W G + +++A A ++ +L+ + A D
Sbjct: 517 YNESIRLNNPQLWLPYNNRGLVYNDQRKYDLALADYSQAIQLNPKDAYAYYNRGNVYDDQ 576
Query: 497 SAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKVL 544
++A A++ +PK ANAYY G + +EK +
Sbjct: 577 GKYDLAIADYSQAIQLNPK-------YANAYYTRGLTNKDQRNMEKAI 617
>gi|196228972|ref|ZP_03127838.1| TPR repeat-containing protein [Chthoniobacter flavus Ellin428]
gi|196227253|gb|EDY21757.1| TPR repeat-containing protein [Chthoniobacter flavus Ellin428]
Length = 555
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 69/155 (44%), Gaps = 21/155 (13%)
Query: 251 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 310
W+ LGL++L+ GR ++ ++ +A+ P N +LG+AY GD+E++ F++ +
Sbjct: 43 WHQLGLVVLQLGRPAEAVDLIRQAVALQPGNAALHSDLGVAYRMRGDLEEAITSFRNAL- 101
Query: 311 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 370
+ HP A + L G L AG + E A SA+ A P
Sbjct: 102 --RLHPGAGHTHRNL-----GDALLAAGQS--EEAIASYRSAI-----------AAQPTD 141
Query: 371 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 405
A NL N Y G + C ++A LEP +
Sbjct: 142 AGAHNNLGNVYLHLGQLEDAAACYQRAVDLEPRLI 176
Score = 42.7 bits (99), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 104/259 (40%), Gaps = 50/259 (19%)
Query: 61 LSRLTNEDSNHSSSHHDKGSILMSKEMDVAEVEGKKINKLGKCRSRISSKMDSALEFGVD 120
L ++ NH+S+ H G +++ G+ + R ++ + +A
Sbjct: 29 LRQIVAVQPNHTSAWHQLGLVVLQL--------GRPAEAVDLIRQAVALQPGNA------ 74
Query: 121 ADGDQSGLGTSSSSR---EEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAV 177
S LG + R EE ++S + L R P H H LG GQ +A+
Sbjct: 75 --ALHSDLGVAYRMRGDLEEAITSFRNAL----RLHPGAGHTHRNLGDALLAAGQSEEAI 128
Query: 178 SSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESSG--DNSLDKELEPEELEEILS 235
+SY A IA AQ P +G +N + L +LE+ +
Sbjct: 129 ASYRSA----------IA------------AQ---PTDAGAHNNLGNVYLHLGQLEDAAA 163
Query: 236 KLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQS 295
+ ++ + R + LG +L K R + + +LA+DPN + N+G+AY++
Sbjct: 164 CYQRAVDLEPRLIQAQSNLGDMLTKLDRPEEGLVCAQRVLALDPNFAEGHLNMGVAYWRM 223
Query: 296 GDMEQSAKCFQDLILKDQN 314
G ++ C++ I + N
Sbjct: 224 GHFAEAETCYRRAIALNPN 242
>gi|257059198|ref|YP_003137086.1| peptidase S1 and S6 chymotrypsin/Hap [Cyanothece sp. PCC 8802]
gi|256589364|gb|ACV00251.1| peptidase S1 and S6 chymotrypsin/Hap [Cyanothece sp. PCC 8802]
Length = 810
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 76/176 (43%), Gaps = 21/176 (11%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
+LEE ++ ++++Q + A +N LG L G+L+ +I+ + ++PN NL
Sbjct: 112 KLEEAIAAYQKAIQLNPNFAQAYNNLGNALSDQGKLEEAIAAYQKAIQLNPNFTQAYYNL 171
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLD 348
GIA G +E++ +Q I + N+ A N L + LD
Sbjct: 172 GIALSDQGKLEEAIAAYQKAIQLNPNYADAYYNLGVALF---------------DQGKLD 216
Query: 349 QASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNC 404
+A A A++ DP A+ + NL A Y G + +KA +L PN
Sbjct: 217 EAIA------AYQKAIQLDPNDANAYNNLGAALYKQGKLEEAIAAYQKAIQLNPNL 266
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 82/193 (42%), Gaps = 26/193 (13%)
Query: 231 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 290
+E ++ ++++Q D A +N LGL L G+ +I+ + ++PN NLG
Sbjct: 352 DEAIAAYQKAIQLDPNDANAYNNLGLALRNQGKRDEAITAYQKAIQLNPNFALAYNNLGN 411
Query: 291 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQA 350
A + G E++ +Q I + N AL G+ L+ G D+A
Sbjct: 412 ALYSQGKREEAIAAYQKAIQLNPNF--------ALAYNNLGNALSDQGKR-------DEA 456
Query: 351 SAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYA 410
A A++ +P A + NL NA G + +KA +L PN +A
Sbjct: 457 IA------AYQKAIQLNPNFALAYNNLGNALSDQGKLNEAIATYQKAIQLNPN-----FA 505
Query: 411 VAVSRIKDAERSQ 423
+A + + +A + Q
Sbjct: 506 LAYNNLGNALKDQ 518
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 72/178 (40%), Gaps = 21/178 (11%)
Query: 237 LKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSG 296
+ ++ D A +N LG L G+L +I+ + ++PN+ D NLG A + G
Sbjct: 52 FRRVIELDPNLADAYNNLGNALYYQGKLDEAIAAYQKAIQLNPNDADAYNNLGNALYYQG 111
Query: 297 DMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVA 356
+E++ +Q I + N A N G+ L+ G L++A A
Sbjct: 112 KLEEAIAAYQKAIQLNPNFAQAYNN--------LGNALSDQGK-------LEEAIA---- 152
Query: 357 KECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVS 414
A++ +P + NL A G + +KA +L PN Y + V+
Sbjct: 153 --AYQKAIQLNPNFTQAYYNLGIALSDQGKLEEAIAAYQKAIQLNPNYADAYYNLGVA 208
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 63/155 (40%), Gaps = 21/155 (13%)
Query: 260 KSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAAL 319
K G+ + ++ ++ +DPN D NLG A + G ++++ +Q I + N A
Sbjct: 41 KMGKYTEAEAIFRRVIELDPNLADAYNNLGNALYYQGKLDEAIAAYQKAIQLNPNDADAY 100
Query: 320 INYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLAN 379
N G+ L G L++A A A++ +P A + NL N
Sbjct: 101 NN--------LGNALYYQGK-------LEEAIA------AYQKAIQLNPNFAQAYNNLGN 139
Query: 380 AYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVS 414
A G + +KA +L PN Y + ++
Sbjct: 140 ALSDQGKLEEAIAAYQKAIQLNPNFTQAYYNLGIA 174
>gi|67920262|ref|ZP_00513782.1| TPR repeat:Sel1-like repeat:Sel1-like repeat [Crocosphaera watsonii
WH 8501]
gi|67857746|gb|EAM52985.1| TPR repeat:Sel1-like repeat:Sel1-like repeat [Crocosphaera watsonii
WH 8501]
Length = 353
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 83/195 (42%), Gaps = 26/195 (13%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
+LEE + K++++ D + +N +G L K G+L+ +I+ + +DPN+ N+
Sbjct: 75 KLEEATAAYKKAIELDPNYSFAYNNMGNALRKQGKLEEAIAAYKKAIELDPNDAFAYNNM 134
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLD 348
G+A G +E++ ++ I D N+ A N G L+
Sbjct: 135 GLALDDQGKLEEAIAAYKKAIELDPNYATAYYNM---------------------GNALN 173
Query: 349 QASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTR 408
+ + A A++ DP + + N+ A G + + +KA ++ PN
Sbjct: 174 RQGKLEEAIAAYKKAIELDPNYSFAYNNMGVALRKQGKYDEAIAAYKKAIEINPN----- 228
Query: 409 YAVAVSRIKDAERSQ 423
YA A + + A R Q
Sbjct: 229 YAFAYNNMGVALRKQ 243
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 75/186 (40%), Gaps = 26/186 (13%)
Query: 238 KESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGD 297
++ + D+ A+ + +GL L K G+L+ + + + +DPN N+G A + G
Sbjct: 50 RQIISIDSNNAIAYFYIGLALRKQGKLEEATAAYKKAIELDPNYSFAYNNMGNALRKQGK 109
Query: 298 MEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAK 357
+E++ ++ I D N A A G LD + A
Sbjct: 110 LEEAIAAYKKAIELDPND---------------------AFAYNNMGLALDDQGKLEEAI 148
Query: 358 ECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIK 417
A++ DP A + N+ NA G + +KA +L+PN Y+ A + +
Sbjct: 149 AAYKKAIELDPNYATAYYNMGNALNRQGKLEEAIAAYKKAIELDPN-----YSFAYNNMG 203
Query: 418 DAERSQ 423
A R Q
Sbjct: 204 VALRKQ 209
Score = 45.8 bits (107), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 32/156 (20%), Positives = 74/156 (47%), Gaps = 23/156 (14%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 213
P +A A+ +GL G+ +A+++Y+KA E+ ++A
Sbjct: 125 PNDAFAYNNMGLALDDQGKLEEAIAAYKKAIEL-----------------DPNYATAYY- 166
Query: 214 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 273
+ N+L+++ +LEE ++ K++++ D + +N +G+ L K G+ +I+
Sbjct: 167 --NMGNALNRQ---GKLEEAIAAYKKAIELDPNYSFAYNNMGVALRKQGKYDEAIAAYKK 221
Query: 274 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLI 309
+ ++PN N+G+A + G +++ ++ I
Sbjct: 222 AIEINPNYAFAYNNMGVALRKQGKYDEAIAAYKKAI 257
Score = 39.7 bits (91), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 48/236 (20%), Positives = 103/236 (43%), Gaps = 44/236 (18%)
Query: 68 DSNHSSSHHDKGSILMSK-EMDVAEVEGKKINKLGKCRSRISSKMDSALEFGVDADGDQS 126
D N+S ++++ G+ L + +++ A KK +L + + M AL+ DQ
Sbjct: 90 DPNYSFAYNNMGNALRKQGKLEEAIAAYKKAIELDPNDAFAYNNMGLALD-------DQG 142
Query: 127 GLGTSSSSREEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEI 186
L EE +++ K + P A A++ +G R G+ +A+++Y+KA E+
Sbjct: 143 KL-------EEAIAAYKKAI----ELDPNYATAYYNMGNALNRQGKLEEAIAAYKKAIEL 191
Query: 187 LLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPE-ELEEILSKLKESMQSDT 245
P S N++ L + + +E ++ K++++ +
Sbjct: 192 ---------DPNY---------------SFAYNNMGVALRKQGKYDEAIAAYKKAIEINP 227
Query: 246 RQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQS 301
A +N +G+ L K G+ +I+ + ++PN+ N+G+A G +++
Sbjct: 228 NYAFAYNNMGVALRKQGKYDEAIAAYKKAIEINPNDAFGYNNMGLALDDQGKYDEA 283
>gi|427731479|ref|YP_007077716.1| hypothetical protein Nos7524_4360 [Nostoc sp. PCC 7524]
gi|427367398|gb|AFY50119.1| tetratricopeptide repeat protein [Nostoc sp. PCC 7524]
Length = 379
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 80/168 (47%), Gaps = 23/168 (13%)
Query: 231 EEILSKLKESMQSD-TRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLG 289
E ++ ++++ D TR A +N LGL+L + G+L +I+ DP+N + NL
Sbjct: 145 EAAITAYRQALVIDPTRTAAHYN-LGLVLYEQGQLPEAIAAYQQATNFDPSNANAYYNLA 203
Query: 290 IAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQ 349
IA +SG ME++ +Q ++ D + AA N GS++A G
Sbjct: 204 IALQESGKMEEAIVAYQQVLKLDPKNAAAYSN--------LGSLMALQGQT--------- 246
Query: 350 ASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKA 397
A A+ V + A++ DPK A + NL Y GD + + L++A
Sbjct: 247 AEAIAVYTQ----AVRQDPKNASAYYNLGVTLYNQGDLKKATAALKRA 290
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 72/167 (43%), Gaps = 21/167 (12%)
Query: 151 RKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQC 210
R P A++ LGL QR GQ A+++Y +A L+ A L LV Q
Sbjct: 122 RINPNLGEAYYNLGLALQRQGQKEAAITAYRQA---LVIDPTRTAAHYNLGLVLYEQGQ- 177
Query: 211 LLPESSGDNSLDKELEPE----------------ELEEILSKLKESMQSDTRQAVVWNTL 254
LPE+ +P ++EE + ++ ++ D + A ++ L
Sbjct: 178 -LPEAIAAYQQATNFDPSNANAYYNLAIALQESGKMEEAIVAYQQVLKLDPKNAAAYSNL 236
Query: 255 GLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQS 301
G ++ G+ +I+V + + DP N NLG+ + GD++++
Sbjct: 237 GSLMALQGQTAEAIAVYTQAVRQDPKNASAYYNLGVTLYNQGDLKKA 283
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 84/193 (43%), Gaps = 17/193 (8%)
Query: 237 LKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSG 296
++++Q D + N LG I L RL ++ + ++PN + NLG+A + G
Sbjct: 83 FRQALQRDPNLGMARNYLGNIFLMQNRLDIAVQEYGEAIRINPNLGEAYYNLGLALQRQG 142
Query: 297 DMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASA---V 353
E + ++ ++ D AA N L+L + G L A A + D ++A
Sbjct: 143 QKEAAITAYRQALVIDPTRTAAHYN-LGLVLYEQGQ-LPEAIAAYQQATNFDPSNANAYY 200
Query: 354 NVA---------KECLLA---ALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLE 401
N+A +E ++A LK DPK A ++NL + L G + +A + +
Sbjct: 201 NLAIALQESGKMEEAIVAYQQVLKLDPKNAAAYSNLGSLMALQGQTAEAIAVYTQAVRQD 260
Query: 402 PNCMSTRYAVAVS 414
P S Y + V+
Sbjct: 261 PKNASAYYNLGVT 273
>gi|320352889|ref|YP_004194228.1| hypothetical protein Despr_0763 [Desulfobulbus propionicus DSM
2032]
gi|320121391|gb|ADW16937.1| Tetratricopeptide TPR_1 repeat-containing protein [Desulfobulbus
propionicus DSM 2032]
Length = 210
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 95/212 (44%), Gaps = 26/212 (12%)
Query: 226 EPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCI 285
+P +L ++ +L++ ++ + + LGLI ++GR+ +I+ L + +D + + +
Sbjct: 6 KPADLSAVIGELEKIVEEKPNNVMARHHLGLIYRQAGRIDEAIAQLEKAIELDNQSMESM 65
Query: 286 GNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGA 345
NLG +F GD +++ + Q + + A +N L+ G V
Sbjct: 66 INLGAIFFDRGDTDRALELNQQALAISPDMAEAHVNI-GLIRQHRGEV------------ 112
Query: 346 CLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 405
D+A A C A++ DPK W NL +AY + + +A LEP+
Sbjct: 113 --DKAVA------CYSKAVQIDPKLITAWINLTSAYTMLEQDDKAVDAARQAVTLEPDSA 164
Query: 406 STRYAVAVS-----RIKDAERSQEPTEQLSWA 432
R +AV+ +++R+ E ++L ++
Sbjct: 165 MARNNLAVALYFKGDFAESQRNMEKAKELGYS 196
>gi|376003617|ref|ZP_09781425.1| hypothetical protein ARTHRO_1550003 [Arthrospira sp. PCC 8005]
gi|375327915|emb|CCE17178.1| hypothetical protein ARTHRO_1550003 [Arthrospira sp. PCC 8005]
Length = 499
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 79/183 (43%), Gaps = 24/183 (13%)
Query: 221 LDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPN 280
LDK+ ++ E +S K S+ ++ NT G +LLK G + +++S L + ++PN
Sbjct: 81 LDKQ---NKIAEAISVAKISLNLKPDSWILNNTYGWLLLKRGYIYTAVSYLQKGIELNPN 137
Query: 281 NCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGAN 340
NLG AY + + + Q I AL ++ K G VL G
Sbjct: 138 FFWLHYNLGDAYLRQQRLSDAINSVQQAI--------ALNPLSSDAHNKLGEVLLEKGEI 189
Query: 341 TGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKL 400
T AC +A A+N P +A + NL NA TG + S C +A ++
Sbjct: 190 TKAIACFHKAIAIN-------------PNSAWYYQNLGNAVAQTGSFKQSRACYTRAIQI 236
Query: 401 EPN 403
PN
Sbjct: 237 NPN 239
>gi|225850039|ref|YP_002730273.1| TPR repeat protein [Persephonella marina EX-H1]
gi|225646624|gb|ACO04810.1| TPR repeat protein [Persephonella marina EX-H1]
Length = 937
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 111/258 (43%), Gaps = 39/258 (15%)
Query: 240 SMQSDTRQAVVWNTLGLILLKSGRL--------------QSSISVLSSLLAVDPNNCDCI 285
++ D+ A W LGL KSG++ +++I + + ++PN D
Sbjct: 125 TVNIDSNLANAWYNLGLSWAKSGKIHKEKGNLDDAMNCFKNAIRYYENTVKINPNFADAW 184
Query: 286 GNLGIAYFQSG-------DMEQSAKCFQDLILKDQNHPAALIN-YAALLLCKYGSVLAGA 337
NLG+++ +SG +++ + CF++ I +N A IN A G A +
Sbjct: 185 YNLGLSWARSGEIHKEKGNLDDAMNCFKNAIRYCKN--AVKINPNLANAWSNLGFSWAKS 242
Query: 338 GANTGEGACLDQASAV--NVAKECLLAALKADPKAAHIWANLANAYYLTGD-HRSSG--- 391
G E LD A N + C A+K +P A+ W NL ++ G+ H+ G
Sbjct: 243 GEIRKEKGNLDDAMNCFKNAIRYCE-NAVKINPNLANAWYNLGVSWQKLGEIHKEKGNIF 301
Query: 392 ----KCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQEPTEQLSWAGNEMASILRE-GDPV 446
+CLE A K+ PN Y + VS + E +E L A N + +R + V
Sbjct: 302 DNSIRCLENAVKINPNFADAWYNLGVSWARSGEIHKEKG-NLDDAMNCFKNAIRYCENAV 360
Query: 447 QIEPPI--AWAGFAAVQK 462
I+P + AW+ + +
Sbjct: 361 NIDPNLANAWSDLGILWR 378
>gi|318040539|ref|ZP_07972495.1| TPR repeat-containing protein [Synechococcus sp. CB0101]
Length = 590
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 102/236 (43%), Gaps = 40/236 (16%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEI---LLRCEADIARPELLSLVQIHHAQC 210
P NA A LG LG+ KAV S+ +A + + + A++ +L IH
Sbjct: 77 PNNAEAWLNLGTAQHALGRSAKAVESFRQAASLKPTMAKAYANLGH----ALQAIHDLPG 132
Query: 211 LLPESSGDNSLDKELEPE-------------ELEEILSKLKESMQSDTRQAVVWNTLGLI 257
L S SL + L PE + E ++ L++++ + N LGL
Sbjct: 133 ALQAYSQALSL-QPLYPEVLSARGVALRKQGHINESIASLQQAINQRSPYPEALNNLGLS 191
Query: 258 LLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPA 317
L ++G+L+ +++ LA+ P + + + NLG+A + G ++Q+ CFQ + + +P
Sbjct: 192 LQEAGQLEEALNCFEQALALTPEHPEILSNLGLALMEQGRIDQAKTCFQQALNYNPLYPE 251
Query: 318 ALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHI 373
A + L C +G D A A+ C L L+ PKA H+
Sbjct: 252 A---HRHLAYCVHGR---------------DDAEPEQAARAC-LEELQDHPKAYHL 288
>gi|425449527|ref|ZP_18829366.1| TPR repeat protein (modular protein) [Microcystis aeruginosa PCC
7941]
gi|389763752|emb|CCI09797.1| TPR repeat protein (modular protein) [Microcystis aeruginosa PCC
7941]
Length = 1038
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/264 (21%), Positives = 107/264 (40%), Gaps = 40/264 (15%)
Query: 220 SLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDP 279
+L K+L+ LEE ++ ++ + + A W+ LG+I+ G++ +I L ++P
Sbjct: 382 TLQKQLK---LEEAIALYQQLINQSPQYAAAWHQLGVIMDSLGQIDQAILAYKQALLINP 438
Query: 280 NNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGA 339
N + NLGI GD++++ CF I +QN+ A A
Sbjct: 439 NYAESHNNLGIIAVSKGDLDEAIICFNQAIRSNQNY---------------------AFA 477
Query: 340 NTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAK 399
+ G L + A A++ +P NL N L G + + A K
Sbjct: 478 DNNLGLVLQMQDKLGDAVVNFQEAIRKNPNYPEAHFNLGNVLQLQGKIEEAIAYFQTAIK 537
Query: 400 LEPNCMSTRYAVAVSRIKDAERSQEPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFAA 459
L P +Y A + + A Q+ E S+ ++ +Q P A+A +
Sbjct: 538 LNP-----KYIKAYNSLALALGRQDKVE-------AAMSVFKQALAIQPNSPEAFACLFS 585
Query: 460 VQKTHHEVAAAFETEENELSKMEE 483
++ E+ +ET E +L ++ +
Sbjct: 586 MK----EMTCNWETREADLIQLWQ 605
>gi|118387255|ref|XP_001026739.1| TPR Domain containing protein [Tetrahymena thermophila]
gi|89308506|gb|EAS06494.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
Length = 1417
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 111/304 (36%), Gaps = 63/304 (20%)
Query: 144 TGLVHVARKM---------------PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILL 188
GLV+ +KM PK A++ GL+Y+ Q A+ YEKA E+
Sbjct: 525 IGLVYYDKKMFDEALESYNKAIEINPKYNQAYYNSGLVYELKNQKETAIEKYEKAIEL-- 582
Query: 189 RCEADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQA 248
P+ +S A L + D S + E + IL +S+ + R
Sbjct: 583 -------SPKYIS------ALIRLADIYAD-SQQYQRGIECFKRILEITPDSVYDNYR-- 626
Query: 249 VVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDL 308
LG I ++ L ++PN + I N+G+ Y+ + E++ KC++
Sbjct: 627 -----LGYIYYCLKNFDEAMYYYKKALEINPNYINAINNVGLVYYNQKNYEEALKCYEKA 681
Query: 309 ILKDQNHPAALINYAALLLCK-------------------YGSVLAGAGANTGEGACLDQ 349
I D+N+ A N L K Y S L +G LD+
Sbjct: 682 IEIDKNYFQAHYNSGILYEAKKMIDEALDCYKKVMEINPNYFSALIRSG-----NIYLDK 736
Query: 350 ASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRY 409
N A EC L+ DP NL Y + C KA ++ PN + Y
Sbjct: 737 YMTDN-ALECFKKILEIDPNYIDAINNLGIVYEDKQMFDEAIDCYIKAIQINPNYVKAHY 795
Query: 410 AVAV 413
+ V
Sbjct: 796 NLGV 799
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 64/291 (21%), Positives = 113/291 (38%), Gaps = 37/291 (12%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 213
P + A+ LGL+Y+ KA+ Y+KA EI +C I L I+ Q L
Sbjct: 992 PNYSEAYDKLGLIYEEKKMDEKAIEYYKKAIEIDSKCFNAIN-----GLGNIYLDQKLTA 1046
Query: 214 ESSGDNSLDKELEPEEL----------------EEILSKLKESMQSDTRQAVVWNTLGLI 257
E+ EL+P+ + ++ + K++++ D R +N LGLI
Sbjct: 1047 EAIKCYMAALELDPKSVKTHYNLGISFEDERNYDQAVYHYKKAVELDPRYINAYNNLGLI 1106
Query: 258 LLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPA 317
G+L +++ L ++PN + N+G+ Y+ ME + ++ + + N+
Sbjct: 1107 YEMKGKLDDALTCYQKALEINPNYVNAHNNVGLVYYAQNKMEDALINYRKALELNPNYYQ 1166
Query: 318 ALINYAALLLCKYGSVLAGA---------------GANTGEGACLDQASAVNVAKECLLA 362
AL N + L+ Y + A A G + ++ A +C
Sbjct: 1167 ALYN-SGLIYETYYKQIDQAIAFYKRVIELSPKYFSAYIRLGNIYLDSKMMDEALDCYQR 1225
Query: 363 ALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAV 413
L+ DP NL Y + KC +A +L P Y + +
Sbjct: 1226 ILEIDPNYIDAINNLGIVYEEKEMLDEALKCYRRAIELNPKYTKAYYNMGI 1276
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 62/304 (20%), Positives = 114/304 (37%), Gaps = 39/304 (12%)
Query: 228 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 287
+ L+E + L+++++ D A + LG + + +I + +DPN+ D +
Sbjct: 91 DNLDESIKFLEKAIEIDPNYAEAYERLGWVYENQNLIDQAIDSYKKAIEIDPNHLDSHYS 150
Query: 288 LGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL 347
LG+ Y G +++ + ++ ++ D N+ ALIN + C L
Sbjct: 151 LGVVYESQGKIDEGIEHYKKMLEIDPNNIKALINLSRNYFCD-----------------L 193
Query: 348 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 407
A+ +CL ++ +PK + L Y + + +K +L+PN S
Sbjct: 194 MHEDAI----KCLNKVIEIEPKNKVAYERLGFIYENQNKIDEAIQNYQKVIELDPNFQSV 249
Query: 408 RYAVAVSRIKDAERSQEPTEQLSWAGNEMASILREGDPVQIEPPIAWA----GFAAVQKT 463
++ T+ + E L++G +QI P A G+ K
Sbjct: 250 YISLGFMYF---------TKNMD---EEAIECLKKG--IQINPKFVQAYERLGYVYQMKN 295
Query: 464 HHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKADPKAAHIWANL 523
E A + + E+ A VN A+ C L AL+ DP + NL
Sbjct: 296 MTEEAFEYYKKAIEIDPKYFEAQFNLGLLYYNLKMVNEAEVCYLNALQIDPLDIYTHYNL 355
Query: 524 ANAY 527
Y
Sbjct: 356 GLVY 359
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 63/301 (20%), Positives = 120/301 (39%), Gaps = 58/301 (19%)
Query: 128 LGTSSSSREEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEI- 186
+ + + EE + LK G+ + PK A+ LG +YQ +A Y+KA EI
Sbjct: 256 MYFTKNMDEEAIECLKKGI----QINPKFVQAYERLGYVYQMKNMTEEAFEYYKKAIEID 311
Query: 187 -----------LLRC------EADIARPELLSL----VQIHHAQCLLPESSGDNSLDKEL 225
LL EA++ L + + H+ L+ E+
Sbjct: 312 PKYFEAQFNLGLLYYNLKMVNEAEVCYLNALQIDPLDIYTHYNLGLVYETK--------- 362
Query: 226 EPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCI 285
+ ++ LS +++++ + + + G I L++ + +I +L +DPN D I
Sbjct: 363 --KMFDKALSCYQKAIELNPKYLNAYIRSGNIYLETKKQDDAIQCYQKILELDPNYVDAI 420
Query: 286 GNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGA 345
NLGI Y + +++S +C++ + D P + A+ G
Sbjct: 421 NNLGIVYEEKKMLDESMECYKKALQID---PLYV------------------KAHYNLGI 459
Query: 346 CLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 405
+ + A E A++ DPK + + L N Y S+ +KA +++PN +
Sbjct: 460 VYELKKMHDQAIESYERAIEIDPKYINAYNKLGNIYLDKKILYSALNYYKKALEIDPNYV 519
Query: 406 S 406
+
Sbjct: 520 N 520
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 58/277 (20%), Positives = 100/277 (36%), Gaps = 58/277 (20%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEI---LLRCEADIARPELLSLVQIHHAQC 210
P + +H+ LG++Y+ G+ + + Y+K EI ++ +++R L+ +C
Sbjct: 142 PNHLDSHYSLGVVYESQGKIDEGIEHYKKMLEIDPNNIKALINLSRNYFCDLMHEDAIKC 201
Query: 211 LLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISV 270
L N + E+EP + V + LG I ++ +I
Sbjct: 202 L-------NKV-IEIEP------------------KNKVAYERLGFIYENQNKIDEAIQN 235
Query: 271 LSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKY 330
++ +DPN +LG YF E++ +C + I Q +P + Y L
Sbjct: 236 YQKVIELDPNFQSVYISLGFMYFTKNMDEEAIECLKKGI---QINPKFVQAYERL----- 287
Query: 331 GSVLAGAG---------------------ANTGEGACLDQASAVNVAKECLLAALKADPK 369
G V A G VN A+ C L AL+ DP
Sbjct: 288 GYVYQMKNMTEEAFEYYKKAIEIDPKYFEAQFNLGLLYYNLKMVNEAEVCYLNALQIDPL 347
Query: 370 AAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMS 406
+ NL Y + C +KA +L P ++
Sbjct: 348 DIYTHYNLGLVYETKKMFDKALSCYQKAIELNPKYLN 384
Score = 43.1 bits (100), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 90/243 (37%), Gaps = 50/243 (20%)
Query: 163 LGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLD 222
+GL+Y +A+ YEKA EI + Q H+ +L E+
Sbjct: 661 VGLVYYNQKNYEEALKCYEKAIEIDK------------NYFQAHYNSGILYEAK------ 702
Query: 223 KELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNC 282
+ ++E L K+ M+ + G I L +++ +L +DPN
Sbjct: 703 -----KMIDEALDCYKKVMEINPNYFSALIRSGNIYLDKYMTDNALECFKKILEIDPNYI 757
Query: 283 DCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTG 342
D I NLGI Y +++ C+ I + N+ A N L K+
Sbjct: 758 DAINNLGIVYEDKQMFDEAIDCYIKAIQINPNYVKAHYNLGVLYENKFK----------- 806
Query: 343 EGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLE---KAAK 399
D A A C L ++ DPK + N Y D + + K LE KA +
Sbjct: 807 ----FDDALA------CFLKVIEIDPKYMSAYNRAGNIY---LDRQMNEKALEFYKKALE 853
Query: 400 LEP 402
++P
Sbjct: 854 IDP 856
Score = 41.6 bits (96), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 34/181 (18%), Positives = 71/181 (39%), Gaps = 27/181 (14%)
Query: 226 EPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCI 285
E E L+E L + +++ + + + +G+I + +I+ +++ +DP + I
Sbjct: 1246 EKEMLDEALKCYRRAIELNPKYTKAYYNMGIIYEDQNKFDDAINCYKTIIELDPKYINAI 1305
Query: 286 GNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGA 345
LG Y + +++ C+Q + + N+ A N G
Sbjct: 1306 NRLGNIYLDLQNDDEALACYQKALEINPNYLYAFYN---------------------LGL 1344
Query: 346 CLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCL---EKAAKLEP 402
+ + A +C + DPK + NL + + + K L +KA K++P
Sbjct: 1345 VYSEKKKIGKAIQCYQKVISIDPKYIDGYINLG---VIFDEKKQMNKALTQYKKALKIDP 1401
Query: 403 N 403
N
Sbjct: 1402 N 1402
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 53/271 (19%), Positives = 101/271 (37%), Gaps = 65/271 (23%)
Query: 276 AVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLA 335
A + NN D + G+ + +SG+ +++ + F ++ + NH
Sbjct: 3 AEESNNIDFLLQKGLEFQESGNFDEAVEYFNRVLNINLNH-------------------- 42
Query: 336 GAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLE 395
AN G ++ ++ A EC + +P + ++A Y+ + S K LE
Sbjct: 43 -EDANYNLGFTYEKQDKLDQALECYKKVISINPSYIKAYVSIARVYFNQDNLDESIKFLE 101
Query: 396 KAAKLEPNCMSTRYAVAVSRIKDAERSQEPTEQLSWAGNEMASILREGDPVQIEPPIAWA 455
KA +++PN YA A R+ +Q +Q + + I DP ++
Sbjct: 102 KAIEIDPN-----YAEAYERLGWVYENQNLIDQAIDSYKKAIEI----DPNHLD------ 146
Query: 456 GFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKADPK 515
+H+ + +E++ K++E E L+ DP
Sbjct: 147 -------SHYSLGVVYESQ----GKIDE------------------GIEHYKKMLEIDPN 177
Query: 516 AAHIWANLANAYYLTGDHRSSGKCLEKVLMV 546
NL+ Y+ H + KCL KV+ +
Sbjct: 178 NIKALINLSRNYFCDLMHEDAIKCLNKVIEI 208
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 50/250 (20%), Positives = 95/250 (38%), Gaps = 44/250 (17%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 213
P AH+ LG++Y+ + A++ + K EI P+ +S
Sbjct: 788 PNYVKAHYNLGVLYENKFKFDDALACFLKVIEI---------DPKYMSAYN--------- 829
Query: 214 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 273
+G+ LD+++ E+ L K++++ D +N +GLI +L ++
Sbjct: 830 -RAGNIYLDRQMN----EKALEFYKKALEIDPTYVNAYNNIGLIFYNQRKLDDALEYYDK 884
Query: 274 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSV 333
L ++PN N G+ Y E + C+ + + N+ A I + ++
Sbjct: 885 ALQINPNYFQAQYNSGLVYELKFQNELAILCYTRALEINPNYTNAQI--------RLENI 936
Query: 334 LAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKC 393
L G E L + + N +P+ + L YY + + C
Sbjct: 937 LLKDGIKQEELEVLKKKAEENT----------NNPED---YYKLGYVYYTNFNMDEAISC 983
Query: 394 LEKAAKLEPN 403
L KA ++ PN
Sbjct: 984 LNKAIEINPN 993
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 103/270 (38%), Gaps = 44/270 (16%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 213
P A + GL+Y+ Q A+ Y +A EI P + QI LL
Sbjct: 890 PNYFQAQYNSGLVYELKFQNELAILCYTRALEI---------NPNYTN-AQIRLENILLK 939
Query: 214 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 273
+ ++ EELE LK+ + +T + LG + + + +IS L+
Sbjct: 940 DG---------IKQEELE----VLKKKAEENTNNPEDYYKLGYVYYTNFNMDEAISCLNK 986
Query: 274 LLAVDPNNCDCIGNLGIAY-----------FQSGDMEQSAKCFQDL-----ILKDQNHPA 317
+ ++PN + LG+ Y + +E +KCF + I DQ A
Sbjct: 987 AIEINPNYSEAYDKLGLIYEEKKMDEKAIEYYKKAIEIDSKCFNAINGLGNIYLDQKLTA 1046
Query: 318 ALIN-YAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWAN 376
I Y A L SV + G + + A A++ DP+ + + N
Sbjct: 1047 EAIKCYMAALELDPKSV----KTHYNLGISFEDERNYDQAVYHYKKAVELDPRYINAYNN 1102
Query: 377 LANAYYLTGDHRSSGKCLEKAAKLEPNCMS 406
L Y + G + C +KA ++ PN ++
Sbjct: 1103 LGLIYEMKGKLDDALTCYQKALEINPNYVN 1132
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 53/270 (19%), Positives = 102/270 (37%), Gaps = 38/270 (14%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 213
P AH+ LG++Y+ +A+ SYE+A EI P+ ++
Sbjct: 448 PLYVKAHYNLGIVYELKKMHDQAIESYERAIEI---------DPKYINAYN--------- 489
Query: 214 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 273
G+ LDK++ L L+ K++++ D +N +GL+ ++ +
Sbjct: 490 -KLGNIYLDKKI----LYSALNYYKKALEIDPNYVNAYNNIGLVYYDKKMFDEALESYNK 544
Query: 274 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAAL-------- 325
+ ++P N G+ Y E + + ++ I + +ALI A +
Sbjct: 545 AIEINPKYNQAYYNSGLVYELKNQKETAIEKYEKAIELSPKYISALIRLADIYADSQQYQ 604
Query: 326 --LLCKYGSVLA----GAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLAN 379
+ C + +L N G + A AL+ +P + N+
Sbjct: 605 RGIEC-FKRILEITPDSVYDNYRLGYIYYCLKNFDEAMYYYKKALEINPNYINAINNVGL 663
Query: 380 AYYLTGDHRSSGKCLEKAAKLEPNCMSTRY 409
YY ++ + KC EKA +++ N Y
Sbjct: 664 VYYNQKNYEEALKCYEKAIEIDKNYFQAHY 693
>gi|218439885|ref|YP_002378214.1| hypothetical protein PCC7424_2942 [Cyanothece sp. PCC 7424]
gi|218172613|gb|ACK71346.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 7424]
Length = 632
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 70/313 (22%), Positives = 131/313 (41%), Gaps = 49/313 (15%)
Query: 101 GKCRSRISSKMDSALEFGVDADGDQSGLGTSSSSR---EEKVSSLKTGLVHVARKMPKNA 157
GK I++ ++A+E + S LG + S++ EE +++ + P A
Sbjct: 108 GKLEEAIAA-YNTAIEINPNYAEVYSNLGFALSNQGKLEEAIAAYNKAI----EINPNYA 162
Query: 158 HAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESSG 217
A+ LG+ G+ +A+++Y KA EI P + +++ + G
Sbjct: 163 FAYIGLGIALYNQGKLEEAIAAYNKAIEI---------NP---NYAEVYSNLGFALYNQG 210
Query: 218 DNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAV 277
+LEE ++ +++ + A +N LG+ L G+L+ +I+ ++ + +
Sbjct: 211 -----------KLEEAIAAYNTAIEINPNDAFAYNNLGIALSNQGKLEEAIAAYNTAIEI 259
Query: 278 DPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGA 337
+PN+ NLG+A + G +E++ + I + N A I G
Sbjct: 260 NPNDAFAYNNLGVALYNQGKLEEAIAAYNTAIEINPNDAFAYI---------------GL 304
Query: 338 GANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYL--TGDHRSSGKCLE 395
G + L++A A K LA KAD + H A+ Y L G + E
Sbjct: 305 GIALHDQGKLEEAIAA-YNKTLSLADKKADRASVHTLAHTTLGYALQQQGKLEEAIAEYE 363
Query: 396 KAAKLEPNCMSTR 408
KA K++PN + +
Sbjct: 364 KALKIDPNNTTAQ 376
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 74/175 (42%), Gaps = 21/175 (12%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
+LEE ++ +++ + A V+N LG+ L G+L+ +I+ ++ + ++PN + NL
Sbjct: 75 KLEEAIAAYNTAIEINPNYAEVYNNLGVALYYQGKLEEAIAAYNTAIEINPNYAEVYSNL 134
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLD 348
G A G +E++ + I + N+ A I G G L
Sbjct: 135 GFALSNQGKLEEAIAAYNKAIEINPNYAFAYI---------------------GLGIALY 173
Query: 349 QASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 403
+ A A++ +P A +++NL A Y G + A ++ PN
Sbjct: 174 NQGKLEEAIAAYNKAIEINPNYAEVYSNLGFALYNQGKLEEAIAAYNTAIEINPN 228
>gi|157879370|pdb|1NA0|A Chain A, Design Of Stable Alpha-Helical Arrays From An Idealized
Tpr Motif
gi|157879371|pdb|1NA0|B Chain B, Design Of Stable Alpha-Helical Arrays From An Idealized
Tpr Motif
Length = 125
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 66/143 (46%), Gaps = 22/143 (15%)
Query: 276 AVDP-NNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVL 334
A+DP N+ + NLG AY++ GD +++ + +Q + D N+ A N L
Sbjct: 2 AMDPGNSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYN------------L 49
Query: 335 AGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCL 394
A G+ + A E AL+ DP A W NL NAYY GD+ + +
Sbjct: 50 GNAYYKQGD---------YDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYY 100
Query: 395 EKAAKLEPNCMSTRYAVAVSRIK 417
+KA +L+PN + + ++ K
Sbjct: 101 QKALELDPNNAEAKQNLGNAKQK 123
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 46/93 (49%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
+ +E + +++++ D A W LG K G +I L +DPNN + NL
Sbjct: 24 DYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNL 83
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALIN 321
G AY++ GD +++ + +Q + D N+ A N
Sbjct: 84 GNAYYKQGDYDEAIEYYQKALELDPNNAEAKQN 116
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 36/74 (48%)
Query: 248 AVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQD 307
A W LG K G +I L +DPNN + NLG AY++ GD +++ + +Q
Sbjct: 9 AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQK 68
Query: 308 LILKDQNHPAALIN 321
+ D N+ A N
Sbjct: 69 ALELDPNNAEAWYN 82
Score = 45.8 bits (107), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 33/66 (50%)
Query: 358 ECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIK 417
E AL+ DP A W NL NAYY GD+ + + +KA +L+PN Y + + K
Sbjct: 30 EYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYK 89
Query: 418 DAERSQ 423
+ +
Sbjct: 90 QGDYDE 95
>gi|91201886|emb|CAJ74946.1| hypothetical protein kuste4184 [Candidatus Kuenenia
stuttgartiensis]
Length = 423
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 73/345 (21%), Positives = 133/345 (38%), Gaps = 65/345 (18%)
Query: 72 SSSHHDKGSILMSKEM-DVAEVEGKKINKLGKCRSRISSKMDSALEFGVDADGDQSGLGT 130
SS D S L +++ DV V+G+ S S+ +AL+ A LG
Sbjct: 114 SSLQLDTDSFLAHEKLGDVYRVQGE--------YSEAVSEYKNALKINPKAVETMYNLGV 165
Query: 131 SSSSREEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRC 190
+ ++ +++T L V P AHF LG +Y G P A++++ K EI R
Sbjct: 166 VYVNNDQTEEAIQTLLDAVGIN-PNYTDAHFFLGQIYLNNGLPDNALNAFSKVTEINPRH 224
Query: 191 EADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVV 250
+L H + + D ++ + K+S++ D + V
Sbjct: 225 ----------ALAHYHLGLTFYEKGNVDGAV-------------ASYKKSIEIDAKNPQV 261
Query: 251 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 310
+LG++ ++I +++ +DP+N D LG+AY + ++
Sbjct: 262 HYSLGIVYSDEKLFDNAIEEFRTVVKLDPDNADAHYRLGLAYANKRTLVKAV-------- 313
Query: 311 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 370
SV A A+ A++ A L A++ +P
Sbjct: 314 --------------------SSVQKAASAHYNIKNPYSDKRALDEAITSLQMAIEINPYN 353
Query: 371 AHIWANLANAYYLTGDHR--SSGKCLEKAAKLEPNCMSTRYAVAV 413
I+ +L NAY + D R + + LE+ +++PN Y +A+
Sbjct: 354 PEIYFDLGNAY--SQDRRLDEAARALEETIRIDPNFAKAHYGLAL 396
Score = 38.5 bits (88), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 77/185 (41%), Gaps = 23/185 (12%)
Query: 136 EEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEI--------- 186
+E +SS + + R P A AHF L + Y +A+S+ KA EI
Sbjct: 38 DEVISSYQKAI----RINPGLAEAHFNLAIAYNSRTMLDEAISALVKAVEINPKYKEAYL 93
Query: 187 ---LLRCEA---DIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKES 240
LL E D A+ L S +Q+ L E GD + E E +S+ K +
Sbjct: 94 QLGLLYMEKEMWDNAKATLSSSLQLDTDSFLAHEKLGDVYRVQG----EYSEAVSEYKNA 149
Query: 241 MQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQ 300
++ + + LG++ + + + + +I L + ++PN D LG Y +G +
Sbjct: 150 LKINPKAVETMYNLGVVYVNNDQTEEAIQTLLDAVGINPNYTDAHFFLGQIYLNNGLPDN 209
Query: 301 SAKCF 305
+ F
Sbjct: 210 ALNAF 214
>gi|425437323|ref|ZP_18817742.1| TPR repeat protein (modular protein) [Microcystis aeruginosa PCC
9432]
gi|389677704|emb|CCH93372.1| TPR repeat protein (modular protein) [Microcystis aeruginosa PCC
9432]
Length = 1059
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/264 (21%), Positives = 107/264 (40%), Gaps = 40/264 (15%)
Query: 220 SLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDP 279
+L K+L+ LEE ++ ++ + + A W+ LG+I+ G++ +I L ++P
Sbjct: 403 TLQKQLK---LEEAIALYQQLINQSPQYAAAWHQLGVIMDSLGQIDQAILAYKQALLINP 459
Query: 280 NNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGA 339
N + NLGI GD++++ CF I +QN+ A A
Sbjct: 460 NYAESHNNLGIIAVSKGDLDEAIICFNQAIRSNQNY---------------------AFA 498
Query: 340 NTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAK 399
+ G L + A A++ +P NL N L G + + A K
Sbjct: 499 DNNLGLVLQMQDKLGDAVVNFQEAIRKNPNYPEAHFNLGNVLQLQGKIEEAIAYFQTAIK 558
Query: 400 LEPNCMSTRYAVAVSRIKDAERSQEPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFAA 459
L P +Y A + + A Q+ E S+ ++ +Q P A+A +
Sbjct: 559 LNP-----KYIKAYNSLALALGRQDKVE-------AAMSVFKQALAIQPNSPEAFACLFS 606
Query: 460 VQKTHHEVAAAFETEENELSKMEE 483
++ E+ +ET E +L ++ +
Sbjct: 607 MK----EMTCNWETREADLIQLWQ 626
>gi|428212874|ref|YP_007086018.1| capsular polysaccharide biosynthesis protein [Oscillatoria
acuminata PCC 6304]
gi|428001255|gb|AFY82098.1| capsular polysaccharide biosynthesis protein [Oscillatoria
acuminata PCC 6304]
Length = 791
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 73/175 (41%), Gaps = 25/175 (14%)
Query: 229 ELEEILSKLKES--MQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIG 286
ELE + K + +Q D +A N LGL+L K R + +IS + ++PN +
Sbjct: 227 ELESAIDCFKSTIELQPDWNEAH--NNLGLVLRKINREEEAISSFKKAIEINPNFAEAYR 284
Query: 287 NLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGAC 346
NLG Q G +E +A C +D I N A A+ G
Sbjct: 285 NLGTTLQQQGKLEAAAACLRDCIKIQPNF---------------------ALAHGNLGYV 323
Query: 347 LDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLE 401
L+Q ++ AK L A+ +P A + NL N + G+ S C + A K +
Sbjct: 324 LEQQGKLDEAKASLRHAIALEPDLAMAYGNLGNILHREGELEESISCFQNAIKYD 378
>gi|333987253|ref|YP_004519860.1| hypothetical protein MSWAN_1038 [Methanobacterium sp. SWAN-1]
gi|333825397|gb|AEG18059.1| Tetratricopeptide TPR_1 repeat-containing protein [Methanobacterium
sp. SWAN-1]
Length = 329
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 77/191 (40%), Gaps = 30/191 (15%)
Query: 255 GLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQN 314
G+ LL G+ S+ L L +DPN+ + + + G+A + G E+S KCF ++ D+
Sbjct: 16 GVKLLNQGKYGESLECLDKALELDPNDREILHSKGVALKELGKFEESIKCFDKVLELDKK 75
Query: 315 HPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVA-------KECLLA----- 362
+A N G + A G C D+A +N K LL
Sbjct: 76 VYSAWNN--------KGFIFAKLGQQRDALKCYDKALEINPKYFDAWNNKGGLLTKLGKY 127
Query: 363 ---------ALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAV 413
AL+ +PK W N A + G H C +K ++ P T Y V
Sbjct: 128 EESLKYYNKALELNPKYLKAWNNKAVVFGKLGKHEEELNCFDKILEMNPEDTDTWYNKGV 187
Query: 414 SRIKDAERSQE 424
S +++ E QE
Sbjct: 188 S-LQEMELYQE 197
Score = 41.6 bits (96), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 54/264 (20%), Positives = 99/264 (37%), Gaps = 58/264 (21%)
Query: 164 GLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLDK 223
G ++ +LGQ A+ Y+KA EI P+ ++ LL +
Sbjct: 84 GFIFAKLGQQRDALKCYDKALEI---------NPKYFD--AWNNKGGLLTKLG------- 125
Query: 224 ELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCD 283
+ EE L ++++ + + WN ++ K G+ + ++ +L ++P + D
Sbjct: 126 -----KYEESLKYYNKALELNPKYLKAWNNKAVVFGKLGKHEEELNCFDKILEMNPEDTD 180
Query: 284 CIGNLGIAYFQSGDMEQSAKCFQDLILK-DQNHPAALINYAALL--LCKYGSVLAGAGAN 340
N G++ Q ++ Q A D++LK D+ +A+ N + L KY L
Sbjct: 181 TWYNKGVS-LQEMELYQEALKSYDMVLKLDETDLSAINNKGVIFKELGKYNKALE----- 234
Query: 341 TGEGACLDQASAVNVAK---------------------ECLLAALKADPKAAHIWANLAN 379
C D+ +N K C LK +P W +
Sbjct: 235 -----CFDKVLELNPNKIETMGNKGITFRELGKFPESLNCFNKLLKLNPNDKMGWYHKGL 289
Query: 380 AYYLTGDHRSSGKCLEKAAKLEPN 403
A G H + K + + KL+P+
Sbjct: 290 ALEKLGKHVEAIKSFDNSLKLDPD 313
>gi|425448104|ref|ZP_18828084.1| TPR repeat protein (modular protein) [Microcystis aeruginosa PCC
9443]
gi|389731183|emb|CCI04721.1| TPR repeat protein (modular protein) [Microcystis aeruginosa PCC
9443]
Length = 1040
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 106/264 (40%), Gaps = 40/264 (15%)
Query: 220 SLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDP 279
SL K+L+ LE+ ++ ++ + + A W+ LG+I+ G+L +I L ++P
Sbjct: 384 SLQKQLK---LEDAIALYQQLINQYPQYAPAWHQLGVIMDSLGQLDQAILAYKQALFINP 440
Query: 280 NNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGA 339
N NLGI GD++++ CF I +QN+ A A
Sbjct: 441 NYAKSYNNLGIIAVSKGDLDEAIICFNQAIRSNQNY---------------------AFA 479
Query: 340 NTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAK 399
+ G L + A A++ +P NL N L G + + A K
Sbjct: 480 DNNLGLVLQMQDKLGDAGVKFQEAIRKNPNYPEAHFNLGNVLQLQGKTEEAIAYFQTAIK 539
Query: 400 LEPNCMSTRYAVAVSRIKDAERSQEPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFAA 459
L P +Y A + + A Q+ E S+ ++ +Q P A+A +
Sbjct: 540 LNP-----KYIKAYNSLALALGRQDKVE-------AAMSVFKQALAIQPNSPEAFACLFS 587
Query: 460 VQKTHHEVAAAFETEENELSKMEE 483
++ E+ +ET E +L ++ +
Sbjct: 588 MK----EMTCNWETREADLIQIWQ 607
>gi|390949284|ref|YP_006413043.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Thiocystis violascens DSM 198]
gi|390425853|gb|AFL72918.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Thiocystis violascens DSM 198]
Length = 749
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 80/190 (42%), Gaps = 16/190 (8%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
E E KL + SD A W LG +L K Q ++++L L++DP++ +C+ L
Sbjct: 152 EGETAARKLTKRYPSD---AFGWRALGTLLFKRDDYQGALTMLQKALSIDPHHAECLNTL 208
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAAL---------INYAALLLCKYGSVLAGAG- 338
G A G ++ CF + D ++ AA +N + Y LA A
Sbjct: 209 GNALNNLGRAREAIDCFNRALEIDPDYAAAHNSKGVALKDLNRMEEAIACYRRALALAPD 268
Query: 339 ---ANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLE 395
A+ GA ++ A EC AL +P+ A ++NL A G S E
Sbjct: 269 LAEAHNNLGAAFKGVGRLDEALECHRQALAINPRYAEAYSNLGGALQGLGRLDESIAAYE 328
Query: 396 KAAKLEPNCM 405
++ +L P +
Sbjct: 329 RSLQLNPKLI 338
>gi|307168162|gb|EFN61441.1| Tetratricopeptide repeat protein 37 [Camponotus floridanus]
Length = 1299
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 74/171 (43%), Gaps = 17/171 (9%)
Query: 251 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSG-DMEQSAKCFQDLI 309
W T G I G S+ + + D NN +C+ LG Y + G D+E+S +C+ +
Sbjct: 446 WLTFGKIYWDMGDYNHSLMAFLNGVQADRNNWECMVYLGHYYREHGNDVERSRRCYHTAL 505
Query: 310 LKDQNHPAALINY-----------AALLLCKYGSVLAGAGANTGEGAC----LDQASAVN 354
+ N A I A + L + ++ G GA LDQ A
Sbjct: 506 QINPNSEEAGIGLSTAYRLLKNTDANIHLLQRVTMQQGTGAKWAWLQLGLQHLDQGDATE 565
Query: 355 VAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 405
K L ++ADP H W +LA+AY + G H S+ K ++A +L P +
Sbjct: 566 AIK-ALQHVIRADPNDNHSWESLADAYLVRGAHTSALKSYQRALQLSPGAL 615
>gi|169832335|ref|YP_001718317.1| hypothetical protein Daud_2198 [Candidatus Desulforudis audaxviator
MP104C]
gi|169639179|gb|ACA60685.1| Tetratricopeptide TPR_2 repeat protein [Candidatus Desulforudis
audaxviator MP104C]
Length = 209
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 76/181 (41%), Gaps = 25/181 (13%)
Query: 226 EPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCI 285
EP+ EE +++ K ++ + A LG+ +++ RL + + +
Sbjct: 4 EPQGSEEFIAEQKRILKENEDCATAAYNLGVAMMQQNRLDEAREHFEKAIETGSRMFEAY 63
Query: 286 GNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALIN--YAALLLCKYGSVLAGAGANTGE 343
NLG YF+ GDME+ A+ + + + + N +A L + K TGE
Sbjct: 64 VNLGYIYFKEGDMEKVAEVNRKAVELEPRYARGYANLGFAYLQMAK-----------TGE 112
Query: 344 GACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 403
A E L AL+ +P+ A W NLANAY GD + + E+ L PN
Sbjct: 113 ------------AIEALQKALELNPEIAQAWNNLANAYLQRGDVDKAIEVGERLIALAPN 160
Query: 404 C 404
Sbjct: 161 F 161
Score = 42.7 bits (99), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 37/72 (51%)
Query: 232 EILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIA 291
E + L+++++ + A WN L L+ G + +I V L+A+ PN NL +A
Sbjct: 112 EAIEALQKALELNPEIAQAWNNLANAYLQRGDVDKAIEVGERLIALAPNFGLGHNNLAVA 171
Query: 292 YFQSGDMEQSAK 303
Y+ GD ++ K
Sbjct: 172 YYHKGDFPKAVK 183
>gi|410479070|ref|YP_006766707.1| hypothetical protein LFML04_1537 [Leptospirillum ferriphilum ML-04]
gi|424867786|ref|ZP_18291566.1| Putative TPR-domain containing protein [Leptospirillum sp. Group II
'C75']
gi|124514384|gb|EAY55897.1| putative TPR-domain containing protein [Leptospirillum rubarum]
gi|387221840|gb|EIJ76353.1| Putative TPR-domain containing protein [Leptospirillum sp. Group II
'C75']
gi|406774322|gb|AFS53747.1| putative TPR domain-containing protein [Leptospirillum ferriphilum
ML-04]
Length = 731
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 82/173 (47%), Gaps = 21/173 (12%)
Query: 149 VARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILL-RCEADIA-----------R 196
+ RK P + +F +G +Y++LG P KAV KA + + + D + R
Sbjct: 370 MIRKFPGSYQGYFSMGDLYRKLGNPQKAVFYLRKAHRLAPGKWQIDFSLALTLEDWKKYR 429
Query: 197 PELLSLVQIHHAQCLLPESS-----GDNSLDKELEPEELEEILSKLKESMQSDTRQAVVW 251
P + +L H A L P +S LD+ + L + + LKE+++ D R
Sbjct: 430 PAMAAL---HQAMVLKPGNSLLVFNRAVLLDQWNHRKYLSRVRADLKEAIRLDPRFPDAL 486
Query: 252 NTLGLI-LLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAK 303
N LG ++++G L ++ ++ L DP N +LG YF+ GDM+++ +
Sbjct: 487 NYLGYTDVVENGNLVNARYLILRALTFDPQNPSYRDSLGWCYFKMGDMKRAFR 539
>gi|374814596|ref|ZP_09718333.1| hypothetical protein TpriZ_12085 [Treponema primitia ZAS-1]
Length = 183
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 72/170 (42%), Gaps = 26/170 (15%)
Query: 252 NTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILK 311
N G+ L ++ R +I + L ++P N NLGIA ++GD E++ FQ +
Sbjct: 8 NDSGIALTEANRPYEAIPLFRKALIMEPENPLLWMNLGIAQQRTGDYEEALNSFQRAVYI 67
Query: 312 DQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAA 371
D + A ++ G + +++A+EC +AL D +
Sbjct: 68 DDDLTEAWVSM---------------------GLIYYEIEQLDLAEECYHSALVRDGNSP 106
Query: 372 HIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAER 421
W NL Y++ G + + C E+A + P Y A+ ++DA R
Sbjct: 107 KTWNNLGVLYFVEGSYEEARHCFEEAVTMLP-----MYYEALFNLRDACR 151
Score = 43.9 bits (102), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 43/93 (46%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
+ EE L+ + ++ D W ++GLI + +L + S L D N+ NL
Sbjct: 53 DYEEALNSFQRAVYIDDDLTEAWVSMGLIYYEIEQLDLAEECYHSALVRDGNSPKTWNNL 112
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALIN 321
G+ YF G E++ CF++ + + AL N
Sbjct: 113 GVLYFVEGSYEEARHCFEEAVTMLPMYYEALFN 145
>gi|302037836|ref|YP_003798158.1| hypothetical protein NIDE2523 [Candidatus Nitrospira defluvii]
gi|300605900|emb|CBK42233.1| conserved protein of unknown function, contains TPR repeats
[Candidatus Nitrospira defluvii]
Length = 567
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 86/193 (44%), Gaps = 18/193 (9%)
Query: 127 GLGTSSSSREEKVSSLKTGLVHVARKM---PKNAHAHFLLGLMYQRLGQPLKAVSSYEKA 183
GLG + R +LK L +A+ P+N F G++ QR G+ + AV +Y +A
Sbjct: 62 GLGLLTYRR----GNLKDALGWLAKACAAGPRNPVYWFNHGVVLQRAGRTVDAVEAYGQA 117
Query: 184 -----EEILLRCEADIARPEL--LSLVQIHHAQCLL--PE-SSGDNSLDKEL-EPEELEE 232
I R A EL L+ Q + Q L P+ + N+L L E L+E
Sbjct: 118 IQWNPRYIEARTNLGNAYKELGRLADAQAAYEQVLTLNPDHAEAHNNLGVVLKEQGRLDE 177
Query: 233 ILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAY 292
+ ++ A N LGL+LL+ GRL +I L + P + NLGIA+
Sbjct: 178 AAESYRRAIALKPSHAEAQNNLGLVLLEQGRLDDAIRCFERALQIVPGYGTALYNLGIAW 237
Query: 293 FQSGDMEQSAKCF 305
DM ++ +CF
Sbjct: 238 IWREDMPRALRCF 250
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 36/187 (19%), Positives = 73/187 (39%), Gaps = 21/187 (11%)
Query: 230 LEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLG 289
L++ L L ++ + R V W G++L ++GR ++ + +P + NLG
Sbjct: 73 LKDALGWLAKACAAGPRNPVYWFNHGVVLQRAGRTVDAVEAYGQAIQWNPRYIEARTNLG 132
Query: 290 IAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQ 349
AY + G + + ++ ++ + +H A A+ G L +
Sbjct: 133 NAYKELGRLADAQAAYEQVLTLNPDH---------------------AEAHNNLGVVLKE 171
Query: 350 ASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRY 409
++ A E A+ P A NL G + +C E+A ++ P + Y
Sbjct: 172 QGRLDEAAESYRRAIALKPSHAEAQNNLGLVLLEQGRLDDAIRCFERALQIVPGYGTALY 231
Query: 410 AVAVSRI 416
+ ++ I
Sbjct: 232 NLGIAWI 238
>gi|150403612|ref|YP_001330906.1| hypothetical protein MmarC7_1699 [Methanococcus maripaludis C7]
gi|150034642|gb|ABR66755.1| TPR repeat-containing protein [Methanococcus maripaludis C7]
Length = 409
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 60/326 (18%), Positives = 115/326 (35%), Gaps = 45/326 (13%)
Query: 228 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 287
E+ E+ L S++ D W G+ L G S+
Sbjct: 106 EDYEKALYYFNTSLEIDNSVGKTWFYKGVCLKMLGNYDESVEAFDKSTGNYEEIVLIWNE 165
Query: 288 LGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL 347
LG Y+Q+ +++ +CF + D+N + G+G C
Sbjct: 166 LGYIYYQNEKYDKAIECFDKALALDRNLKYSF---------------------NGKGLCY 204
Query: 348 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLE---PNC 404
++ ++A EC AL D N +Y ++ + C E A +L P C
Sbjct: 205 EKKEQYDLAIECFDKALLEDEFYYDAIYNKGIIHYNLKNYSVAISCFETALELNNSNPYC 264
Query: 405 MSTRYAVAVSRIKDAERSQEPTEQLSWAGNEMASILREGDPVQIEP--PIAWAGFAAVQK 462
+ + L G ++L + VQ++P PI W+G
Sbjct: 265 HFYK-----------------ADSLKGLGKYNEAVLSYKNAVQLDPKNPIFWSGMGLSYN 307
Query: 463 THHEVAAAFETEEN--ELSKMEECAGAGESAFLDQASAVNVAKECLLAALKADPKAAHIW 520
+E + + E +L+ ++ + + + + + C AL+ +P+ + W
Sbjct: 308 YLNEYNLSIQAYEKAAQLNPKDDVSWSNLGYMQYKNKNYSESISCFETALELNPENKYAW 367
Query: 521 ANLANAYYLTGDHRSSGKCLEKVLMV 546
L N+Y L ++ + C EK + +
Sbjct: 368 NGLGNSYILIKNYEKALMCYEKAIKI 393
>gi|390443928|ref|ZP_10231713.1| hypothetical protein A3SI_07739 [Nitritalea halalkaliphila LW7]
gi|389665701|gb|EIM77165.1| hypothetical protein A3SI_07739 [Nitritalea halalkaliphila LW7]
Length = 468
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 112/293 (38%), Gaps = 49/293 (16%)
Query: 157 AHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESS 216
A +LLG Y+ G+ KA+ +Y+ + LR + A +L +L E
Sbjct: 135 AEVQYLLGNFYRANGENEKALEAYKNC--VKLRISHEDALFQL----------AMLTEEE 182
Query: 217 GDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLA 276
G+ EEIL +E + D + W LG++ + GR + +I L
Sbjct: 183 GN-----------FEEILDFYREFIDQDPYSSGAWYNLGVVYNRLGRFEEAIQAYEYALL 231
Query: 277 VDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLI-------------------LKDQNHPA 317
+D + NLG AY E + + +Q+ I L D +
Sbjct: 232 IDDSFASAYFNLGNAYMNLEKFELAREAYQNTINCEGANAENSCYLGAAYEKLGDIDMAF 291
Query: 318 ALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANL 377
+A L +Y G G C+ + A A+K A+ + L
Sbjct: 292 KYFKKSAKLDPEYEDAFFGL------GMCMLRRDKYFEAVHYFKKAIKLADDNANFYVGL 345
Query: 378 ANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQEPTEQLS 430
A+A Y G+ +S + E+A LEP + T +++ + D R +E + ++
Sbjct: 346 ADAEYKLGNLAASSEAYEEAINLEPGILETYVNLSIIYL-DQNRFEEAIDVIN 397
>gi|334131406|ref|ZP_08505170.1| Tetratricopeptide TPR_2 repeat protein [Methyloversatilis
universalis FAM5]
gi|333443573|gb|EGK71536.1| Tetratricopeptide TPR_2 repeat protein [Methyloversatilis
universalis FAM5]
Length = 568
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 78/178 (43%), Gaps = 21/178 (11%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
L+E +++++ A + + LGL+ + GRLQ ++S + LA+ + + + NL
Sbjct: 58 RLDEAEQAFAGAVKANPGSAELLSNLGLVQQQRGRLQEALSTYTRALAIRRDFPELLYNL 117
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLD 348
G+ G ++++A ++ I AL N G+ LD
Sbjct: 118 GVVQDALGRLDEAATSYRRAIALQPRFAVALFNL---------------------GSVLD 156
Query: 349 QASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMS 406
+ A A E A++A+P W+NL A +G+ + +C +KA ++P +
Sbjct: 157 RQGARGEAIEVYRRAVEAEPGFVEAWSNLGAALQQSGEAEQAVRCYQKALDIQPTATA 214
Score = 45.8 bits (107), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 67/147 (45%), Gaps = 29/147 (19%)
Query: 163 LGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELL---SLVQIHHAQCLLPESSGDN 219
LGL+ Q+ G+ +A+S+Y +A L D PELL +VQ +
Sbjct: 83 LGLVQQQRGRLQEALSTYTRA----LAIRRDF--PELLYNLGVVQ--------------D 122
Query: 220 SLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDP 279
+L + L+E + + ++ R AV LG +L + G +I V + +P
Sbjct: 123 ALGR------LDEAATSYRRAIALQPRFAVALFNLGSVLDRQGARGEAIEVYRRAVEAEP 176
Query: 280 NNCDCIGNLGIAYFQSGDMEQSAKCFQ 306
+ NLG A QSG+ EQ+ +C+Q
Sbjct: 177 GFVEAWSNLGAALQQSGEAEQAVRCYQ 203
>gi|406889463|gb|EKD35644.1| hypothetical protein ACD_75C01829G0002 [uncultured bacterium]
Length = 209
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 82/177 (46%), Gaps = 21/177 (11%)
Query: 228 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 287
E+L +++++L++ + + + ++ LGL+ +K+GR+ +I L + +D + + + N
Sbjct: 7 EDLPQVIAELEKKCKEHPQSVMAFHHLGLVYMKAGRVAEAIKALEKAIGLDDLSSESMIN 66
Query: 288 LGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL 347
LG +F G++E++ K+ N A +N + A A+ G
Sbjct: 67 LGAIHFGQGNLEKA---------KELNERALAVNPES------------AQAHANLGLIW 105
Query: 348 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNC 404
Q S + A A+K DPK A W NL + + G+ + K +L+P+
Sbjct: 106 QQQSEFDKAIAAYEKAIKQDPKLASAWMNLTSVLTMKGEDARAVIAARKGLELDPDS 162
>gi|425442300|ref|ZP_18822552.1| TPR repeat protein (modular protein) [Microcystis aeruginosa PCC
9717]
gi|389716770|emb|CCH99039.1| TPR repeat protein (modular protein) [Microcystis aeruginosa PCC
9717]
Length = 1039
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/264 (21%), Positives = 106/264 (40%), Gaps = 40/264 (15%)
Query: 220 SLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDP 279
+L K+L+ LEE ++ ++ + + A W+ LG+I+ G++ +I L ++P
Sbjct: 383 TLQKQLK---LEEAIALYQQLINQHPQYAAAWHQLGVIMDSLGQIDQAILAYKQALLINP 439
Query: 280 NNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGA 339
N + NLGI GD++++ CF I +QN+ A A
Sbjct: 440 NYAESHNNLGIIAVSKGDLDEAIICFNQAIRSNQNY---------------------AFA 478
Query: 340 NTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAK 399
G L + A A++ +P NL N L G + + A K
Sbjct: 479 ENNLGLVLQMQDKLGDAVVNFQEAIRKNPNYPEAHFNLGNVLQLQGKIEEAIAYFQTAIK 538
Query: 400 LEPNCMSTRYAVAVSRIKDAERSQEPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFAA 459
L P +Y A + + A Q+ E S+ ++ +Q P A+A +
Sbjct: 539 LNP-----KYIKAYNSLALALGRQDKVE-------AAMSVFKQALAIQPNSPEAFACLFS 586
Query: 460 VQKTHHEVAAAFETEENELSKMEE 483
++ E+ +ET E +L ++ +
Sbjct: 587 MK----EMTCNWETREADLIQLWQ 606
>gi|440755074|ref|ZP_20934276.1| tetratricopeptide repeat family protein [Microcystis aeruginosa
TAIHU98]
gi|440175280|gb|ELP54649.1| tetratricopeptide repeat family protein [Microcystis aeruginosa
TAIHU98]
Length = 627
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 82/195 (42%), Gaps = 24/195 (12%)
Query: 220 SLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDP 279
+L K+L+ LEE ++ ++ + + A W+ LG+I+ G++ +I L ++P
Sbjct: 382 TLQKQLK---LEEAIALYQQLINQSPQYAPAWHQLGVIMDSLGQIDQAILAYKQALLINP 438
Query: 280 NNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGA 339
N + NLGI GD++++ CF I DQN+ A N L+ + L AG
Sbjct: 439 NYAESHNNLGIIAVSKGDLDEAIICFNQAIRSDQNYAFAENNLG--LVLQMQDKLGDAGV 496
Query: 340 NTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAK 399
E A++ +P NL N L G + + A K
Sbjct: 497 KFQE-------------------AIRKNPNYPEAHFNLGNVLQLQGKIEEAIAYFQTAIK 537
Query: 400 LEPNCMSTRYAVAVS 414
L P + ++A++
Sbjct: 538 LNPKYIKAYNSLALA 552
>gi|323452442|gb|EGB08316.1| putative O-linked GlcNAc transferase [Aureococcus anophagefferens]
Length = 1151
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 89/193 (46%), Gaps = 17/193 (8%)
Query: 226 EPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCI 285
E +++ +++ +++ + AV L + G L+ +I + L ++PN D
Sbjct: 276 EQGKVDAAIAEYARAIELNPGFAVAHGNLASCYFEKGDLERAIRIFRVALDIEPNFPDAC 335
Query: 286 GNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAA------------LINYAALLLCKYGSV 333
NLG A + GD+E++ C++ +L +H A L+N A + C +V
Sbjct: 336 NNLGNALREHGDLEEAIACYRRALLLRPDHAHAHNNLGNAMKDKGLVNEA--IQCYATAV 393
Query: 334 -LAG--AGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSS 390
LA A A++ G L + V+ A A+ DP+ A ++N+ NAY G +
Sbjct: 394 GLAPRFAAAHSNLGLVLKERGTVDDALAHYREAIAVDPQFADAYSNMGNAYKDLGRLDDA 453
Query: 391 GKCLEKAAKLEPN 403
+C +A KL P+
Sbjct: 454 IRCYGEALKLRPD 466
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 76/188 (40%), Gaps = 26/188 (13%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
L++ + +E+++ + LG +L + G++ ++I+ + + ++P GNL
Sbjct: 245 RLDDAAAYYREAIRRKPSAFDAHSNLGNVLKEQGKVDAAIAEYARAIELNPGFAVAHGNL 304
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLD 348
YF+ GD+E++ + F+ + + N P A N G L
Sbjct: 305 ASCYFEKGDLERAIRIFRVALDIEPNFPDACNNL---------------------GNALR 343
Query: 349 QASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTR 408
+ + A C AL P AH NL NA G + +C A L P R
Sbjct: 344 EHGDLEEAIACYRRALLLRPDHAHAHNNLGNAMKDKGLVNEAIQCYATAVGLAP-----R 398
Query: 409 YAVAVSRI 416
+A A S +
Sbjct: 399 FAAAHSNL 406
>gi|260829669|ref|XP_002609784.1| hypothetical protein BRAFLDRAFT_58685 [Branchiostoma floridae]
gi|229295146|gb|EEN65794.1| hypothetical protein BRAFLDRAFT_58685 [Branchiostoma floridae]
Length = 946
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 76/165 (46%), Gaps = 27/165 (16%)
Query: 271 LSSLLA---VDPNNCDCIGNLGIAYFQ-SGDMEQSAKCFQDLILKDQN--HPAALINYAA 324
++SLL +DP++ D LG Y +GD+++S +C+Q DQ+ A A
Sbjct: 13 MTSLLKAAKLDPHHSDTFLYLGHYYRDVAGDVQRSKRCYQKAFDLDQSSEEAGAAFGDAC 72
Query: 325 LLLCK-------YGSVLAGAGANTGEGACL----------DQASAVNVAKECLLAALKAD 367
+ L + Y SV + A A T + A L D AV + L AAL+AD
Sbjct: 73 IALGEEEAGLKLYVSVTSKASAGTAKWAWLRLGLYQLKHGDGTQAV----KSLQAALRAD 128
Query: 368 PKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVA 412
PK H W LA AY G + + K KAA+L P + Y VA
Sbjct: 129 PKDPHCWECLAEAYLSRGGYTGALKAFTKAAELNPEATYSLYQVA 173
>gi|330506685|ref|YP_004383113.1| TPR-repeat-containing protein [Methanosaeta concilii GP6]
gi|328927493|gb|AEB67295.1| TPR-repeat protein [Methanosaeta concilii GP6]
Length = 705
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 80/195 (41%), Gaps = 21/195 (10%)
Query: 230 LEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLG 289
L+E + L + ++ D W+ G I++++GR + + S L +DP N L
Sbjct: 96 LQEAIRSLDQVLRIDQSLDEAWSLKGEIMMETGRYRMAQLCFDSALRLDPGNMTLYNRLA 155
Query: 290 IAYFQSGDMEQSAKCFQ-----------------DLILKDQNHPAALINYAALLLCKYGS 332
+ D + + + ++ DL L +P AL ++ LL
Sbjct: 156 QSQLMLEDYDHALRSYKKALSLEANNTEILFNQGDLFLTLARYPEALNSFNLLLEQNKSD 215
Query: 333 VLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGK 392
+L A G C Q V+ A+E L+ +P+ W L Y T D+ SS +
Sbjct: 216 IL----ALKGRAECYRQLGQVDRAEEDYYTVLEKNPEDFESWRGLGMVRYATEDYSSSLQ 271
Query: 393 CLEKAAKLEPNCMST 407
++A K+ P+ + T
Sbjct: 272 AFDQALKINPHDIQT 286
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 87/230 (37%), Gaps = 54/230 (23%)
Query: 224 ELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCD 283
+L+ +L++ L +E + D+ + W G ILL + +I + L ++P N D
Sbjct: 396 QLDLGDLDQALQSYEELLGHDSNSSAAWIGRGEILLLQTNIDPAIESFNRALDIEPQNPD 455
Query: 284 CIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAAL--LLC---KYGS------ 332
+ L A Q G +E++ ++ I ++ ++ Y L +LC +YG
Sbjct: 456 ALMGLAEALHQKGRLEEARSYYEAAIAEE----PSVRGYRGLGNILCAQGEYGQSIPLFE 511
Query: 333 ------------------VLAGAGANTGEGACLDQASAVNV------------------- 355
LA G ++G C ++ ++N
Sbjct: 512 SALSQEPSDTESLMGKGLALAATGNSSGALQCFNEIVSLNPEDSAAWSNRGSIFAALGRY 571
Query: 356 --AKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 403
A+E L A +A IW NL Y L H S + E A +L P+
Sbjct: 572 DEARESLQKAAGISSSSADIWYNLGQVYRLMDRHNQSRQAFENATRLSPD 621
Score = 42.0 bits (97), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 78/177 (44%), Gaps = 13/177 (7%)
Query: 251 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 310
+ LG IL G SI + S L+ +P++ + + G+A +G+ + +CF +++
Sbjct: 490 YRGLGNILCAQGEYGQSIPLFESALSQEPSDTESLMGKGLALAATGNSSGALQCFNEIVS 549
Query: 311 KDQNHPAALINYAALL--LCKYG----SVLAGAGANTGEGACLDQASAV-------NVAK 357
+ AA N ++ L +Y S+ AG ++ V N ++
Sbjct: 550 LNPEDSAAWSNRGSIFAALGRYDEARESLQKAAGISSSSADIWYNLGQVYRLMDRHNQSR 609
Query: 358 ECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVS 414
+ A + P +W L A TG+ + + K L++A L+P +Y++A++
Sbjct: 610 QAFENATRLSPDDPVLWLELGLAQERTGEAKLALKSLQRAVVLDPKNEFAQYSLALA 666
Score = 39.7 bits (91), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 59/279 (21%), Positives = 92/279 (32%), Gaps = 54/279 (19%)
Query: 274 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSV 333
+L DP N + + A GD++Q+ + +++L+ D N AA I
Sbjct: 378 ILGQDPKNARALLGMAKAQLDLGDLDQALQSYEELLGHDSNSSAAWI------------- 424
Query: 334 LAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKC 393
G G L + ++ A E AL +P+ LA A + G +
Sbjct: 425 --------GRGEILLLQTNIDPAIESFNRALDIEPQNPDALMGLAEALHQKGRLEEARSY 476
Query: 394 LEKAAKLEPN-----------CMSTRYAVAVSRIKDAERSQEPTEQLSWAGNEMASILRE 442
E A EP+ C Y ++ + A SQEP++ S G
Sbjct: 477 YEAAIAEEPSVRGYRGLGNILCAQGEYGQSIPLFESA-LSQEPSDTESLMGK-------- 527
Query: 443 GDPVQIEPPIAWAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVA 502
G A + A E L+ + A + + + A
Sbjct: 528 -------------GLALAATGNSSGALQCFNEIVSLNPEDSAAWSNRGSIFAALGRYDEA 574
Query: 503 KECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLE 541
+E L A +A IW NL Y L H S + E
Sbjct: 575 RESLQKAAGISSSSADIWYNLGQVYRLMDRHNQSRQAFE 613
>gi|401408423|ref|XP_003883660.1| hypothetical protein NCLIV_034150 [Neospora caninum Liverpool]
gi|325118077|emb|CBZ53628.1| hypothetical protein NCLIV_034150 [Neospora caninum Liverpool]
Length = 987
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 68/155 (43%), Gaps = 14/155 (9%)
Query: 248 AVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQD 307
A +WN G+ L GR+ ++ L +DP N + + N+G+A + G++ Q+ + ++
Sbjct: 183 ANLWNCKGVALRALGRVHEALECCREALRLDPRNTNALNNIGVALKERGELLQAVEHYRA 242
Query: 308 LILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKAD 367
+ + + P +N A L T G L Q + A C AL AD
Sbjct: 243 SLAANPHQPTCRMNLAVAL--------------TDLGTKLKQEKKLQAALVCYTEALTAD 288
Query: 368 PKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 402
P A + NL + T D ++ + +A ++ P
Sbjct: 289 PTYAPCYYNLGVIHAETDDPHTALQMYREAVRINP 323
Score = 45.1 bits (105), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 36/70 (51%)
Query: 252 NTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILK 311
N LG++ +G++ ++ + V+P+ + NLG+ Y GD+E S K + ++
Sbjct: 473 NNLGVLYTCTGKIGEALQFAKRAIEVNPSYAEAYNNLGVLYRDQGDIEDSVKAYDKCLVL 532
Query: 312 DQNHPAALIN 321
D N P A N
Sbjct: 533 DPNSPNAFHN 542
>gi|297568796|ref|YP_003690140.1| TPR repeat-containing protein [Desulfurivibrio alkaliphilus AHT2]
gi|296924711|gb|ADH85521.1| TPR repeat-containing protein [Desulfurivibrio alkaliphilus AHT2]
Length = 197
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 54/125 (43%), Gaps = 15/125 (12%)
Query: 206 HHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQ 265
HH Q L PE + +LS L++++ + W LG + + R +
Sbjct: 49 HHPQGLSPEQ---------------QRVLSSLEQAVAENPENVQAWTQLGHLYFDTDRYE 93
Query: 266 SSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAAL 325
+I S L + P++ D + +LG+ Y ++G E + F+ I D H A N +
Sbjct: 94 QAIEAYSRSLELRPDDADVVTDLGVMYRRNGQPELAVTSFRQAIEIDPRHETARFNLGVV 153
Query: 326 LLCKY 330
LL +
Sbjct: 154 LLHDF 158
>gi|126178334|ref|YP_001046299.1| TPR repeat-containing protein [Methanoculleus marisnigri JR1]
gi|125861128|gb|ABN56317.1| TPR repeat-containing protein [Methanoculleus marisnigri JR1]
Length = 279
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 79/200 (39%), Gaps = 33/200 (16%)
Query: 220 SLDKELEP------------EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSS 267
S+D E P LEE L+ +++ + AV W + + R+ +
Sbjct: 87 SIDPEFAPAWVSRGMLHRRRNRLEEALACYDRAVELNPDSAVAWYNRSGVFVAMHRMDDA 146
Query: 268 ISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLL 327
++ +LA+DP+ +LG A+F E++ C+ + D P ++
Sbjct: 147 VACYERVLAIDPHFVAAWTDLGYAHFLGHRHEEAIACYDRAVADD---PGSV-------- 195
Query: 328 CKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDH 387
+ S+ GA GE A EC L DPK A W+ + Y G +
Sbjct: 196 -RVWSLKGGALYALGE---------YRKALECFDKVLSIDPKYAAGWSMKCSVLYHLGMY 245
Query: 388 RSSGKCLEKAAKLEPNCMST 407
R + C +KA ++ P C T
Sbjct: 246 RHALACADKALEINPTCELT 265
Score = 45.8 bits (107), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 89/222 (40%), Gaps = 35/222 (15%)
Query: 343 EGACLDQA---SAVNVAKE--------CLLAALKADPKAAHIWANLANAYYLTGDHRSSG 391
EGAC D AV++A++ C L++DP +W N L G + +
Sbjct: 20 EGACTDSTVSRKAVSLAQQGRFPEAIDCFDRVLESDPANVKMWNNKGVFLDLLGRDQDAL 79
Query: 392 KCLEKAAKLEPNCMSTRYAVA-VSRIKDAERSQEPTEQLSWAGNEMASILREGDPVQIEP 450
C EKA ++P +A A VSR R E L A + A V++ P
Sbjct: 80 DCWEKALSIDPE-----FAPAWVSRGMLHRRRNRLEEAL--ACYDRA--------VELNP 124
Query: 451 --PIAWAGFAAVQKTHHEVAAAFETEENELSKMEECAGA----GESAFLDQASAVNVAKE 504
+AW + V H + A E L+ A G + FL +A
Sbjct: 125 DSAVAWYNRSGVFVAMHRMDDAVACYERVLAIDPHFVAAWTDLGYAHFLGHRHEEAIA-- 182
Query: 505 CLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKVLMV 546
C A+ DP + +W+ A Y G++R + +C +KVL +
Sbjct: 183 CYDRAVADDPGSVRVWSLKGGALYALGEYRKALECFDKVLSI 224
>gi|75910999|ref|YP_325295.1| hypothetical protein Ava_4803 [Anabaena variabilis ATCC 29413]
gi|75704724|gb|ABA24400.1| Tetratricopeptide TPR_3 [Anabaena variabilis ATCC 29413]
Length = 340
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 76/167 (45%), Gaps = 21/167 (12%)
Query: 231 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 290
E ++ ++++ D R+ + LGL+L + G LQ +I+ + ++P+ + NL I
Sbjct: 106 EGAITAYRQALVIDPRRVEAYYNLGLVLYEQGLLQEAIAAYQDAINLEPSKVNAHHNLAI 165
Query: 291 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQA 350
A Q+G ME++ +++++ D + AA N GS++A G A Q
Sbjct: 166 ALQQTGKMEEAIVAYREVLKLDPQNAAAYSN--------LGSLMAMQGRPEEAIAAYTQ- 216
Query: 351 SAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKA 397
A++ DPK A + NL Y GD + + ++A
Sbjct: 217 ------------AVRQDPKNALAYYNLGITLYNQGDLQKASNAFKRA 251
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 71/153 (46%), Gaps = 23/153 (15%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 213
P+ A++ LGL+ G +A+++Y+ A + E S V HH +
Sbjct: 120 PRRVEAYYNLGLVLYEQGLLQEAIAAYQDA----INLEP--------SKVNAHHNLAIAL 167
Query: 214 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 273
+ +G ++EE + +E ++ D + A ++ LG ++ GR + +I+ +
Sbjct: 168 QQTG-----------KMEEAIVAYREVLKLDPQNAAAYSNLGSLMAMQGRPEEAIAAYTQ 216
Query: 274 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQ 306
+ DP N NLGI + GD+++++ F+
Sbjct: 217 AVRQDPKNALAYYNLGITLYNQGDLQKASNAFK 249
>gi|427728339|ref|YP_007074576.1| cytochrome c biogenesis factor [Nostoc sp. PCC 7524]
gi|427364258|gb|AFY46979.1| cytochrome c biogenesis factor [Nostoc sp. PCC 7524]
Length = 492
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 50/89 (56%)
Query: 230 LEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLG 289
LEE ++ +++++ + R A +N LG I + GR +I VL + +DP N NLG
Sbjct: 389 LEEAIAAYRQTIKLNPRHAHAYNNLGSIFGRQGRYNEAIQVLQQSIQLDPKNTPAYFNLG 448
Query: 290 IAYFQSGDMEQSAKCFQDLILKDQNHPAA 318
A +++G EQ+ + F+ + + N+ +A
Sbjct: 449 RALYETGRYEQAVEYFRQALKLEPNYSSA 477
Score = 46.6 bits (109), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 41/193 (21%), Positives = 82/193 (42%), Gaps = 13/193 (6%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
E+ ++SKL S ++ +A ++ LG+ L + Q + + +++++D +
Sbjct: 286 EINSVVSKLPVSKGINSSEAAIYFNLGMALFYEEKWQEASTAFQNVISLDIQHTKSYFMR 345
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAA--LINYAALLLCKYGSVLAG---------- 336
G A + ++ + ++ +I + N+ A L+ Y +A
Sbjct: 346 GRANLYLKNYAEAIQDYRQVIKLEPNNDEAHYLLGYTLTRTNNLEEAIAAYRQTIKLNPR 405
Query: 337 -AGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLE 395
A A G+ + N A + L +++ DPK + NL A Y TG + + +
Sbjct: 406 HAHAYNNLGSIFGRQGRYNEAIQVLQQSIQLDPKNTPAYFNLGRALYETGRYEQAVEYFR 465
Query: 396 KAAKLEPNCMSTR 408
+A KLEPN S +
Sbjct: 466 QALKLEPNYSSAQ 478
>gi|428218616|ref|YP_007103081.1| glycosyl transferase family protein [Pseudanabaena sp. PCC 7367]
gi|427990398|gb|AFY70653.1| glycosyl transferase family 9 [Pseudanabaena sp. PCC 7367]
Length = 2670
Score = 55.5 bits (132), Expect = 7e-05, Method: Composition-based stats.
Identities = 63/289 (21%), Positives = 118/289 (40%), Gaps = 38/289 (13%)
Query: 149 VARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSL-VQIHH 207
V + P + AH+ LGL Y+++G+ +A++SYE+A I P+ + + V + +
Sbjct: 97 VIQLQPDHKEAHYYLGLAYRQVGRLTEAIASYERAIAI---------NPDRIEIQVALGN 147
Query: 208 AQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSS 267
AQ L +L++ + +++ + A N LG ++ L +
Sbjct: 148 AQ---------------LSAGQLDQAEQSYRAAIELNPNLAEAHNGLGGVMSNRDLLDQA 192
Query: 268 ISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHP---------AA 318
S + + PN D NLG+ F+ ++ ++ Q + + NH AA
Sbjct: 193 ASSYERAIELMPNYADAYANLGMTQFRQKNLLEALANCQQALQHNPNHASTYMVLGLIAA 252
Query: 319 LINYAALLLCKYGSVLA----GAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIW 374
+ L + Y +A A A GA + A AL +P A +
Sbjct: 253 EQDNLGLAIAHYQKAIALNPNYANAYCNLGAAQMRQGEPETAIANYHKALAINPNLAEAY 312
Query: 375 ANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQ 423
NL A+ ++ + ++A + +PN +S A+A +K A+ Q
Sbjct: 313 HNLGEAHSQLYQFTTATEFYQRAIQTKPNYVSAHNALATVYLKQAQPDQ 361
>gi|186681165|ref|YP_001864361.1| hypothetical protein Npun_R0666 [Nostoc punctiforme PCC 73102]
gi|186463617|gb|ACC79418.1| TPR repeat-containing protein [Nostoc punctiforme PCC 73102]
Length = 532
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 79/201 (39%), Gaps = 13/201 (6%)
Query: 219 NSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVD 278
N D+ E ++LEE + K K ++ D N LG++L G+L +I+ L +D
Sbjct: 171 NEADRLREAKKLEEAVVKYKAALSLDPNSVYAHNALGVVLHTQGKLSEAIAAYQKALQID 230
Query: 279 PNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL---------LCK 329
PN + NLG A G + ++ +Q + D N N L +
Sbjct: 231 PNYVNAHCNLGKALHTQGKLSEAMAAYQRALRLDPNDADTHCNLGIALHDQGKLSEAIAA 290
Query: 330 YGSVLA----GAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTG 385
Y L A+ G L ++ A AL+ DP A NL Y G
Sbjct: 291 YQKALQIDPNYVNAHCNLGKALHTQGKLSEAMAAYQRALRVDPNYASAHCNLGVTLYHQG 350
Query: 386 DHRSSGKCLEKAAKLEPNCMS 406
+ +KA +++PN ++
Sbjct: 351 KLSEAIAAYQKALQIDPNYVN 371
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 107/262 (40%), Gaps = 46/262 (17%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 213
P + +AH LG++ G+ +A+++Y+KA +I P ++ A C
Sbjct: 197 PNSVYAHNALGVVLHTQGKLSEAIAAYQKALQI---------DPNYVN------AHC--- 238
Query: 214 ESSGDNSLDKELEPE-ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLS 272
+L K L + +L E ++ + +++ D A LG+ L G+L +I+
Sbjct: 239 ------NLGKALHTQGKLSEAMAAYQRALRLDPNDADTHCNLGIALHDQGKLSEAIAAYQ 292
Query: 273 SLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGS 332
L +DPN + NLG A G + ++ +Q + D N+ +A C G
Sbjct: 293 KALQIDPNYVNAHCNLGKALHTQGKLSEAMAAYQRALRVDPNYASAH--------CNLGV 344
Query: 333 VLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGK 392
L G L +A A AL+ DP + NL A + G +
Sbjct: 345 TLYHQGK-------LSEAIA------AYQKALQIDPNYVNAHCNLGKALHTQGKLSEAMA 391
Query: 393 CLEKAAKLEPNCMSTRYAVAVS 414
++A +++PN S + V+
Sbjct: 392 AYQRALRVDPNYASAHCNLGVT 413
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 80/189 (42%), Gaps = 33/189 (17%)
Query: 151 RKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQC 210
R P A AH LG+ G+ +A+++Y+KA +I P ++ A C
Sbjct: 330 RVDPNYASAHCNLGVTLYHQGKLSEAIAAYQKALQI---------DPNYVN------AHC 374
Query: 211 LLPESSGDNSLDKELEPE-ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSIS 269
+L K L + +L E ++ + +++ D A LG+ L G+L +I+
Sbjct: 375 ---------NLGKALHTQGKLSEAMAAYQRALRVDPNYASAHCNLGVTLYHQGKLSEAIA 425
Query: 270 VLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCK 329
L +DPN+ D NLGIA G + ++ +Q +L D N A C
Sbjct: 426 AYQRALRLDPNDADTHCNLGIALHDQGKLSEAIAAYQRALLIDPNDADA--------HCN 477
Query: 330 YGSVLAGAG 338
G L G G
Sbjct: 478 LGIALKGQG 486
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 110/285 (38%), Gaps = 38/285 (13%)
Query: 151 RKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQC 210
R P +A H LG+ G+ +A+++Y+KA +I P ++ A C
Sbjct: 262 RLDPNDADTHCNLGIALHDQGKLSEAIAAYQKALQI---------DPNYVN------AHC 306
Query: 211 LLPESSGDNSLDKELEPE-ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSIS 269
+L K L + +L E ++ + +++ D A LG+ L G+L +I+
Sbjct: 307 ---------NLGKALHTQGKLSEAMAAYQRALRVDPNYASAHCNLGVTLYHQGKLSEAIA 357
Query: 270 VLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL--- 326
L +DPN + NLG A G + ++ +Q + D N+ +A N L
Sbjct: 358 AYQKALQIDPNYVNAHCNLGKALHTQGKLSEAMAAYQRALRVDPNYASAHCNLGVTLYHQ 417
Query: 327 ------LCKYGSVLA----GAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWAN 376
+ Y L A + G L ++ A AL DP A N
Sbjct: 418 GKLSEAIAAYQRALRLDPNDADTHCNLGIALHDQGKLSEAIAAYQRALLIDPNDADAHCN 477
Query: 377 LANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAER 421
L A G + LE A +L PN R + + R + E+
Sbjct: 478 LGIALKGQGKLEEAIAELEIAVRLNPNNTVIRNNLEIYRNEKNEK 522
>gi|410670059|ref|YP_006922430.1| TPR repeat-containing protein [Methanolobus psychrophilus R15]
gi|409169187|gb|AFV23062.1| TPR repeat-containing protein [Methanolobus psychrophilus R15]
Length = 215
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 80/196 (40%), Gaps = 25/196 (12%)
Query: 213 PESSGDNSLDKELEPEELEEILSKLKES------MQSDTRQAVVWNTLGLILLKSGRLQS 266
PE + D E EPEE E + E + SD A++WN G+ G +
Sbjct: 6 PEEWFKLAFDAE-EPEEKIEYFDLILECETRDPVLWSDEALALIWNNKGIAYTFMGMYEE 64
Query: 267 SISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL 326
S+ L + ++ + N+G+A F E+S +C+ ++ D + A IN
Sbjct: 65 SMECFERSLKYNKSDTEVWYNMGVALFNLRRFEESIRCYNRILALDSRNDNAWIN----- 119
Query: 327 LCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGD 386
G VLA G + C + V K+ ++ D K A +W AY G
Sbjct: 120 ---KGDVLAYTGRHREAIECYSK-----VHKD-----IELDCKFAIVWNKKGLAYLDLGL 166
Query: 387 HRSSGKCLEKAAKLEP 402
+ ++ +C K ++P
Sbjct: 167 YENAAECFSKVLSIDP 182
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 35/60 (58%)
Query: 232 EILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIA 291
E SK+ + ++ D + A+VWN GL L G +++ S +L++DP + D I N+ +A
Sbjct: 135 ECYSKVHKDIELDCKFAIVWNKKGLAYLDLGLYENAAECFSKVLSIDPEHADAIENMRLA 194
>gi|389581569|ref|ZP_10171596.1| tetratricopeptide repeat protein [Desulfobacter postgatei 2ac9]
gi|389403204|gb|EIM65426.1| tetratricopeptide repeat protein [Desulfobacter postgatei 2ac9]
Length = 334
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 45/88 (51%)
Query: 238 KESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGD 297
+ ++ D N LG +L+++G + ++ +L + V P N D NLG+AYFQ
Sbjct: 35 RRALHVDRNHVSALNNLGFLLIETGAFEEAVLLLQRAIGVVPENEDAYNNLGLAYFQLEQ 94
Query: 298 MEQSAKCFQDLILKDQNHPAALINYAAL 325
E++ + F+ I + +H +A N L
Sbjct: 95 HERAQRAFETAIRYNPSHHSASFNLGVL 122
>gi|285803495|pdb|3KD7|A Chain A, Designed Tpr Module (Ctpr390) In Complex With Its
Peptide-Ligand (Hsp90 Peptide)
gi|285803496|pdb|3KD7|B Chain B, Designed Tpr Module (Ctpr390) In Complex With Its
Peptide-Ligand (Hsp90 Peptide)
gi|285803497|pdb|3KD7|C Chain C, Designed Tpr Module (Ctpr390) In Complex With Its
Peptide-Ligand (Hsp90 Peptide)
gi|285803498|pdb|3KD7|D Chain D, Designed Tpr Module (Ctpr390) In Complex With Its
Peptide-Ligand (Hsp90 Peptide)
gi|285803499|pdb|3KD7|E Chain E, Designed Tpr Module (Ctpr390) In Complex With Its
Peptide-Ligand (Hsp90 Peptide)
Length = 125
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 54/161 (33%), Gaps = 55/161 (34%)
Query: 248 AVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQD 307
A W LG K G Q +I L +DPNN NLG AY++ GD +Q
Sbjct: 9 AEAWKNLGNAYYKQGDYQKAIEYYQKALELDPNNASAWYNLGNAYYKQGD-------YQK 61
Query: 308 LILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKAD 367
I E AL+ D
Sbjct: 62 AI------------------------------------------------EYYQKALELD 73
Query: 368 PKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTR 408
P A W NAYY GD++ + + +KA +L+PN +
Sbjct: 74 PNNAKAWYRRGNAYYKQGDYQKAIEDYQKALELDPNNAKAK 114
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 44/93 (47%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
+ ++ + +++++ D A W LG K G Q +I L +DPNN
Sbjct: 24 DYQKAIEYYQKALELDPNNASAWYNLGNAYYKQGDYQKAIEYYQKALELDPNNAKAWYRR 83
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALIN 321
G AY++ GD +++ + +Q + D N+ A N
Sbjct: 84 GNAYYKQGDYQKAIEDYQKALELDPNNAKAKQN 116
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 367 DP-KAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAE 420
DP +A W NL NAYY GD++ + + +KA +L+PN S Y + + K +
Sbjct: 4 DPGNSAEAWKNLGNAYYKQGDYQKAIEYYQKALELDPNNASAWYNLGNAYYKQGD 58
>gi|206602734|gb|EDZ39215.1| putative TPR domain-containing protein [Leptospirillum sp. Group II
'5-way CG']
Length = 731
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 82/173 (47%), Gaps = 21/173 (12%)
Query: 149 VARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILL-RCEADIA-----------R 196
+ RK P + +F +G +Y++LG P KAV KA + + + D + R
Sbjct: 370 MIRKFPGSYQGYFSMGDLYRKLGNPQKAVFYLRKAHRLAPGKWQIDFSLALTLEDWKKYR 429
Query: 197 PELLSLVQIHHAQCLLPESS-----GDNSLDKELEPEELEEILSKLKESMQSDTRQAVVW 251
P + +L H A L P +S LD+ + L + + LKE+++ D R
Sbjct: 430 PAMAAL---HQAMVLKPGNSLLVFNRAVLLDQWNHRKYLSRVRADLKEAIRLDPRFPDAL 486
Query: 252 NTLGLI-LLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAK 303
N LG ++++G L ++ ++ L DP N +LG YF+ GD++++ +
Sbjct: 487 NYLGYTDVVENGNLVNARYLILRALTFDPQNPSYRDSLGWCYFKMGDLKRAFR 539
>gi|88602204|ref|YP_502382.1| hypothetical protein Mhun_0913 [Methanospirillum hungatei JF-1]
gi|88187666|gb|ABD40663.1| TPR repeat [Methanospirillum hungatei JF-1]
Length = 280
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 72/180 (40%), Gaps = 21/180 (11%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
+ E+ L L+ + ++ W+T G L+++G L +ISVL+ L +D N D NL
Sbjct: 111 DYEKALEALETATRTGPDNKYAWSTKGYSLIRTGALTEAISVLNKALELDANFSDAWNNL 170
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLD 348
G AY + +++ + D + A N+ +L TG
Sbjct: 171 GWAYAEDKRYDEAVEALSKATSLDPENGYAWNNFGRILYL------------TGR----- 213
Query: 349 QASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTR 408
A++ L A + P+ W NL N Y + S + KA +L P+ R
Sbjct: 214 ----TEEARDALYNATQTKPEFDQGWYNLGNVLYAMKSYNESIEAYRKAVQLNPDNQIAR 269
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 81/186 (43%), Gaps = 13/186 (6%)
Query: 230 LEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLG 289
+E L+ L+E ++S++ WN++G L GR + +I L + ++PN+ N+G
Sbjct: 44 FKEGLAILEEYVKSNSTNPEAWNSIGYALNNLGRFRDAIPPLENATRLEPNHTIAWTNMG 103
Query: 290 IAYFQSGDMEQSAKCFQDLILK--DQNHPAALINYAAL---LLCKYGSVLAGA---GANT 341
AY + GD E++ + + D + + Y+ + L + SVL A AN
Sbjct: 104 WAYNELGDYEKALEALETATRTGPDNKYAWSTKGYSLIRTGALTEAISVLNKALELDANF 163
Query: 342 GE-----GACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEK 396
+ G + + A E L A DP+ + W N YLTG + L
Sbjct: 164 SDAWNNLGWAYAEDKRYDEAVEALSKATSLDPENGYAWNNFGRILYLTGRTEEARDALYN 223
Query: 397 AAKLEP 402
A + +P
Sbjct: 224 ATQTKP 229
>gi|407772276|ref|ZP_11119578.1| hypothetical protein TH2_00215 [Thalassospira profundimaris WP0211]
gi|407284229|gb|EKF09745.1| hypothetical protein TH2_00215 [Thalassospira profundimaris WP0211]
Length = 629
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 79/190 (41%), Gaps = 31/190 (16%)
Query: 230 LEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLG 289
+E+ LS+ KE+M+S N GL ++S+ L +PN+ C L
Sbjct: 5 VEKALSRAKEAMKS--------NQFGL----------AVSICEEHLKAEPNSVVCWDMLA 46
Query: 290 IAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL--LCKYGSVLA-----------G 336
+F D E++ CF+ ++ P + N + K+ L
Sbjct: 47 NVHFLKKDYEKATLCFEKVVELAPKSPKSHQNLGMFYQSIGKFNEALQCFQRAVNCDTNY 106
Query: 337 AGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEK 396
A A G G L V+ A++ AL+ DP+ A ++N A +++ G +++ + K
Sbjct: 107 ARAYNGAGNVLVNVGQVDTAQQYFAKALQLDPQFADAYSNFARVFFIKGQFQAAAQGYAK 166
Query: 397 AAKLEPNCMS 406
A L+P S
Sbjct: 167 AYSLDPEMKS 176
Score = 40.0 bits (92), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 22/104 (21%), Positives = 47/104 (45%), Gaps = 2/104 (1%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
+ E L + ++ DT A +N G +L+ G++ ++ + L +DP D N
Sbjct: 88 KFNEALQCFQRAVNCDTNYARAYNGAGNVLVNVGQVDTAQQYFAKALQLDPQFADAYSNF 147
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALIN--YAALLLCKY 330
+F G + +A+ + D +AL + Y++ ++C +
Sbjct: 148 ARVFFIKGQFQAAAQGYAKAYSLDPEMKSALASQYYSSAMMCDW 191
>gi|118376183|ref|XP_001021274.1| SLEI family protein [Tetrahymena thermophila]
gi|89303041|gb|EAS01029.1| SLEI family protein [Tetrahymena thermophila SB210]
Length = 2889
Score = 54.7 bits (130), Expect = 1e-04, Method: Composition-based stats.
Identities = 44/147 (29%), Positives = 63/147 (42%), Gaps = 21/147 (14%)
Query: 257 ILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHP 316
I L+ L +IS L +L +DP N + LG Y ++Q+ KC++ I D N
Sbjct: 86 IYLEQKILDFAISCLKKVLEIDPYNANAHERLGFTYKAQNLIDQAIKCYKKAIEIDPNCT 145
Query: 317 AALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWAN 376
A N G V G G + A +C L A DPK + +
Sbjct: 146 EAYHN--------LGIVYEGKG-------------LIQQAYQCYLKAQSIDPKYTKSYIS 184
Query: 377 LANAYYLTGDHRSSGKCLEKAAKLEPN 403
LA YYL + + K L+KA ++EPN
Sbjct: 185 LARNYYLDFQIQDAIKSLKKAIEIEPN 211
Score = 45.4 bits (106), Expect = 0.069, Method: Composition-based stats.
Identities = 81/433 (18%), Positives = 171/433 (39%), Gaps = 71/433 (16%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 213
P A+ LG +YQ +A+ +Y+KA ++ + I ++V+I+H + +L
Sbjct: 2196 PNFYEAYGKLGFIYQSKKMFDEAIENYKKAIQLSPKSLESIR-----NIVEIYHNRNMLN 2250
Query: 214 E-SSGDNSLDKELE-----------PEELEEILSKLKESMQSDTRQAVVWNTLGLILLKS 261
E NS+ K E ++E + ++++Q + + + LG L
Sbjct: 2251 EVKEFFNSIPKNTETYYNIGNVFADKYMIDEAIDYYQKTIQLNPQHINAYIELGNTYLNK 2310
Query: 262 GRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALIN 321
+ + ++ + ++ ++P N+G+ +F+ +++ + + + D N+ + N
Sbjct: 2311 IQYEKALECYNKIVEINPKQAVAYNNIGLVHFKQNKYDEAIQFYNKALEVDPNYDLSYYN 2370
Query: 322 YAALLLCK---------YGSVLAGAGANTGEGACLDQASAVNVAKECLLAA----LKAD- 367
+ K Y VL N + L + +N K+ L LKAD
Sbjct: 2371 SGLVYETKKMNDKALECYNKVLK---INPNDKKTLTRIQKINENKDKNLEEIEIDLKADK 2427
Query: 368 -PKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN---------CMSTRYAVAVSRIK 417
P++A + + Y++ S CL+KA ++EPN + Y + I+
Sbjct: 2428 IPQSAKDYFIQGSTYFIKKIKDLSIDCLKKAIEIEPNYSEAYDKLGLVYQYYQMYEDAIQ 2487
Query: 418 DAERSQEPTEQLSWAGNEMASILREGDPV----QIEPPIAWAGFAAVQKTHHEVAAAFET 473
+ +++ E + A + +I E + + I V + HH++ A++
Sbjct: 2488 NFQKAFETNPKCYDAVLSLMAIYLEKKTLFEAKEFHNQIIEKN-PDVPELHHKIGVAYQ- 2545
Query: 474 EENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDH 533
E + D+A C A++ +PK A+ + L N Y +
Sbjct: 2546 ---------------EKSMFDEAIT------CFSKAIELNPKYANAYIKLGNIYLKQIKY 2584
Query: 534 RSSGKCLEKVLMV 546
+ +C EK + +
Sbjct: 2585 EKARECYEKAIEI 2597
Score = 44.7 bits (104), Expect = 0.12, Method: Composition-based stats.
Identities = 60/265 (22%), Positives = 100/265 (37%), Gaps = 40/265 (15%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEI-----------LLRCEADIARPELLS- 201
PK A+ +GL+Y G +A+ SY+KA EI L E + E +
Sbjct: 278 PKQVDAYNNIGLIYYYKGMIKEALESYKKALEIDPKYYKAYHNSALAYEKEKLIDEAIQC 337
Query: 202 ---LVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLIL 258
++I+ + GD +D L L+E + K+ +Q D + +L +
Sbjct: 338 YKKTIEINPSFLKSLTRLGDICIDNNL----LDEGIECFKKIIQLDPQSYFDHYSLADLY 393
Query: 259 LKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAA 318
K L +I+ L ++P LGI+Y + G++E++ +C++ I + N A
Sbjct: 394 YKKNMLVEAINHYKITLEINPQQLSAHLYLGISYKKQGNLEEALQCYKKAIQLNPNSQEA 453
Query: 319 LINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLA 378
N G V A EC AL+ +PK NL
Sbjct: 454 HFN---------------------SGIAYSHLGNVKEALECYKKALEINPKFVSALINLG 492
Query: 379 NAYYLTGDHRSSGKCLEKAAKLEPN 403
Y + + KC + +E N
Sbjct: 493 ALYTNQKIYEDAIKCYQTLLTIEEN 517
Score = 43.1 bits (100), Expect = 0.36, Method: Composition-based stats.
Identities = 69/342 (20%), Positives = 134/342 (39%), Gaps = 48/342 (14%)
Query: 230 LEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLG 289
L E ++ K +++ + +Q LG+ K G L+ ++ + ++PN+ + N G
Sbjct: 399 LVEAINHYKITLEINPQQLSAHLYLGISYKKQGNLEEALQCYKKAIQLNPNSQEAHFNSG 458
Query: 290 IAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCK---------YGSVLAGAGAN 340
IAY G+++++ +C++ + + +ALIN AL + Y ++L N
Sbjct: 459 IAYSHLGNVKEALECYKKALEINPKFVSALINLGALYTNQKIYEDAIKCYQTLLTIEENN 518
Query: 341 ----TGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEK 396
G Q + + A ++ DP + N+ AY + + LE
Sbjct: 519 LDGLNNLGYIYSQKNMFDEAINYFKKVIEIDPTYYLSYYNIGVAYE---SKQMLDEALEY 575
Query: 397 AAKLEPNCMSTRYAVAVSRIKDAERSQEPTEQLSWAGNEMA-SILREGDPVQIEPPIAWA 455
K+E MS +Y + R + + + N+++ IL+ + E I+ A
Sbjct: 576 YNKVEE--MSPKYFIVFVRQGNVYSQKNMQNEAFQCYNKVSEQILKNIYSLSEELEISRA 633
Query: 456 GFAAVQKTHHEVAAAFETE-----------ENELSKMEECAGAGESAFLDQASAVNVAKE 504
F ++E A + + +++MEE A
Sbjct: 634 SFVQESIKNYEDAVKLNPKYIQFYHSLGLLHSNINQMEE------------------AMR 675
Query: 505 CLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKVLMV 546
AA++ DPK + + L N Y + + +CLEK L +
Sbjct: 676 YFQAAIELDPKYINSYLELGNIYSGKAIYDKAQQCLEKALEI 717
Score = 42.0 bits (97), Expect = 0.80, Method: Composition-based stats.
Identities = 87/420 (20%), Positives = 155/420 (36%), Gaps = 40/420 (9%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELL----SLVQIHHAQ 209
P NA+AH LG Y+ +A+ Y+KA EI C ++ L+Q + Q
Sbjct: 108 PYNANAHERLGFTYKAQNLIDQAIKCYKKAIEIDPNCTEAYHNLGIVYEGKGLIQQAY-Q 166
Query: 210 CLLPESSGDNSLDKELEPE--------ELEEILSKLKESMQSDTRQAVVWNTLGLILLKS 261
C L S D K ++++ + LK++++ + + LG +
Sbjct: 167 CYLKAQSIDPKYTKSYISLARNYYLDFQIQDAIKSLKKAIEIEPNSVEAYERLGFVYQNE 226
Query: 262 GRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALIN 321
+I + +DPN + NL + Y + + S +C++ I D A N
Sbjct: 227 KNNSEAIKYYKKAIEIDPNYYNAQFNLALIYQNQNNFDDSFQCYRRAIEIDPKQVDAYNN 286
Query: 322 YAALLLCKYGSVLAGAGANTGEGACLD-------QASAVNVAKECLL-AALKADPKAAHI 373
L+ Y ++ A + + +D SA+ KE L+ A++ K I
Sbjct: 287 IG--LIYYYKGMIKEALESYKKALEIDPKYYKAYHNSALAYEKEKLIDEAIQCYKKTIEI 344
Query: 374 WANLANAYYLTGD-------HRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQEPT 426
+ + GD +C +K +L+P Y++A K
Sbjct: 345 NPSFLKSLTRLGDICIDNNLLDEGIECFKKIIQLDPQSYFDHYSLADLYYK--------K 396
Query: 427 EQLSWAGNEMASILREGDPVQIEPPIAWAGFAAVQKTHHEVAAAFETEENELSKMEECAG 486
L A N I E +P Q+ + + G + ++ + E A + +L+ + A
Sbjct: 397 NMLVEAINHY-KITLEINPQQLSAHL-YLGISYKKQGNLEEALQCYKKAIQLNPNSQEAH 454
Query: 487 AGESAFLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKVLMV 546
V A EC AL+ +PK NL Y + + KC + +L +
Sbjct: 455 FNSGIAYSHLGNVKEALECYKKALEINPKFVSALINLGALYTNQKIYEDAIKCYQTLLTI 514
Score = 41.2 bits (95), Expect = 1.4, Method: Composition-based stats.
Identities = 43/190 (22%), Positives = 81/190 (42%), Gaps = 23/190 (12%)
Query: 225 LEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDC 284
LE + L+ +S LK+ ++ D A LG + +I + +DPN +
Sbjct: 88 LEQKILDFAISCLKKVLEIDPYNANAHERLGFTYKAQNLIDQAIKCYKKAIEIDPNCTEA 147
Query: 285 IGNLGIAYFQSGDMEQSAKCFQDLILKDQN-HPAALINYAALLLCKYGSVLAGAGANTGE 343
NLGI Y G ++Q+ +C+ LK Q+ P +Y +L Y
Sbjct: 148 YHNLGIVYEGKGLIQQAYQCY----LKAQSIDPKYTKSYISLARNYY------------- 190
Query: 344 GACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 403
LD + A + L A++ +P + + L Y ++ + K +KA +++PN
Sbjct: 191 ---LD--FQIQDAIKSLKKAIEIEPNSVEAYERLGFVYQNEKNNSEAIKYYKKAIEIDPN 245
Query: 404 CMSTRYAVAV 413
+ ++ +A+
Sbjct: 246 YYNAQFNLAL 255
Score = 39.3 bits (90), Expect = 6.1, Method: Composition-based stats.
Identities = 34/169 (20%), Positives = 77/169 (45%), Gaps = 25/169 (14%)
Query: 152 KMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELL-SLVQIHHAQC 210
++PK A ++ GL+YQ +AV SY KA E+ P+ + + +Q+
Sbjct: 1446 QVPKCAETYYEFGLVYQDQKMLDEAVESYLKAIEL---------NPKYINAFIQL----- 1491
Query: 211 LLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISV 270
G+ LDK L ++ + K+ ++ D +A+ +N +GL+ + ++
Sbjct: 1492 ------GNAYLDKLL----FDKAIESYKKIIEIDPSKAIAYNNIGLVYFEQEMNDLALEQ 1541
Query: 271 LSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAAL 319
+ ++P + N G+ Y + +++ +C++ ++ + N +L
Sbjct: 1542 FQKAIEINPKYELSLYNSGLVYERKDQNDKALECYRKVLEINPNEQKSL 1590
Score = 38.9 bits (89), Expect = 7.9, Method: Composition-based stats.
Identities = 50/270 (18%), Positives = 107/270 (39%), Gaps = 23/270 (8%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIA-------RPELLSLVQIH 206
PK A+ LGL+Y+ +A+ SY+KA EI + + I +++ +
Sbjct: 855 PKYFDAYDKLGLLYKEKKMISQAIESYKKAFEINPKYYSAIGIIMGLYKEKKMMDEAKQF 914
Query: 207 HAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTR----QAVVWNTLGLILLKSG 262
H + + + +L + E + ++ + + Q T V+ +G I L
Sbjct: 915 HKKVIEDNQNSTQALAQIGEAYQENKMFDEAIDCYQKITELEPFNVDVYIEIGNIYLDKQ 974
Query: 263 RLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINY 322
++ ++L ++P N+G+ Y++ +++ + + + +L + + ++ N
Sbjct: 975 MNDQALECFENVLQINPQEIIAHNNIGLVYYEKKMFDKALEHYNNALLINPDFQQSIYNS 1034
Query: 323 AALLLCK---------YGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHI 373
K Y VL N E L + +++ + L + P A
Sbjct: 1035 GLAYESKNQIDKALECYNRVLQ---LNPDEERSLTRIKKISLQNKILEKKIDKAPSTAKE 1091
Query: 374 WANLANAYYLTGDHRSSGKCLEKAAKLEPN 403
+ Y+ S +CL+KA +L+PN
Sbjct: 1092 FYQQGYLYFQQLKDEQSIQCLKKAIELDPN 1121
>gi|171057178|ref|YP_001789527.1| hypothetical protein Lcho_0487 [Leptothrix cholodnii SP-6]
gi|170774623|gb|ACB32762.1| Tetratricopeptide TPR_2 repeat protein [Leptothrix cholodnii SP-6]
Length = 566
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 88/199 (44%), Gaps = 13/199 (6%)
Query: 222 DKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNN 281
D L+ +E S ++++Q A LGL+LL+ GRL+ + L + V+P+N
Sbjct: 3 DWLLQAGRHDEAESAYRKALQIKPLHARAQEGLGLVLLRIGRLEEAFLHLEAAHKVEPDN 62
Query: 282 CDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAAL------------LLCK 329
+ + + G+ + G++ +A F I +D +P A N + LL K
Sbjct: 63 AEILTHWGLVDLEMGNLGNAAGKFHRAIERDPRNPHAWHNLGLVALKQGQVDTSIELLRK 122
Query: 330 YGSVLAGAG-ANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHR 388
+ G A + L +A ++ A + A + A +W LA+ GD
Sbjct: 123 AIEIRPQHGLAYSNLAMALRRAERLDDALDAARKATEYKADNARVWVVLADVQMNLGDFD 182
Query: 389 SSGKCLEKAAKLEPNCMST 407
++G+ LE+A ++P + T
Sbjct: 183 AAGQSLERATAIDPQHVGT 201
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 88/234 (37%), Gaps = 30/234 (12%)
Query: 224 ELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCD 283
+LE L K +++ D R W+ LGL+ LK G++ +SI +L + + P +
Sbjct: 73 DLEMGNLGNAAGKFHRAIERDPRNPHAWHNLGLVALKQGQVDTSIELLRKAIEIRPQHGL 132
Query: 284 CIGNLGIAYFQSGDMEQSAKCFQDLI-LKDQNHPAALINYAALLLCKYGSVLAGAGANTG 342
NL +A ++ ++ + + K N + VLA N G
Sbjct: 133 AYSNLAMALRRAERLDDALDAARKATEYKADN-------------ARVWVVLADVQMNLG 179
Query: 343 EGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 402
+ + A + L A DP+ + L + TGD S + +A +L P
Sbjct: 180 D---------FDAAGQSLERATAIDPQHVGTFVGLGKRHAATGDPTRSREAYTRALQLNP 230
Query: 403 NCMSTRYAVAVSRIKDAERSQEPTEQLSWAGNEMASILREGDPVQIEPPIAWAG 456
+ R + + + S +W E A EG PV+ P W G
Sbjct: 231 DSADARGGLGELELLLGQWST------AWDLYE-ARRRVEGTPVRPYPFKPWQG 277
>gi|113475214|ref|YP_721275.1| hypothetical protein Tery_1518 [Trichodesmium erythraeum IMS101]
gi|110166262|gb|ABG50802.1| TPR repeat [Trichodesmium erythraeum IMS101]
Length = 597
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 98/221 (44%), Gaps = 22/221 (9%)
Query: 230 LEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDP--------NN 281
+EE ++ L++++ + V LG I G+L +IS L++DP NN
Sbjct: 141 IEEAIASLEKALTINPNYQQVNMALGDIFQTQGKLDKAISSYIKALSIDPKYSKNQNPNN 200
Query: 282 CDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCK---------YGS 332
D + +LG+A ++ G++++S ++ + + + L N AA + Y +
Sbjct: 201 FDALLSLGMALYRRGNLKESQITYEQALEINPHSTECLTNIAATFYEQGRVDIAEACYQA 260
Query: 333 VL----AGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHR 388
V+ A+ G L Q + A EC AALK D + + A LA + D +
Sbjct: 261 VVDLIPTSTDAHINLGFLLSQQEKYDEAIECYKAALKQDQNSVNAIAGLAEVFGKKSDWK 320
Query: 389 SSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQEPTEQL 429
+ + +K KL+ N + +S +++ +S+E Q
Sbjct: 321 TVFQLYQKILKLDSNSADAYAKLGIS-LREIGKSKEAIPQF 360
>gi|298714766|emb|CBJ25665.1| Methyltransferase [Ectocarpus siliculosus]
Length = 738
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 89/219 (40%), Gaps = 41/219 (18%)
Query: 245 TRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKC 304
T AVV N + +L +G LQ ++ L +DP + LG AY G + +
Sbjct: 289 TVGAVVMNLMARLLHDAGNLQGAVDAYLKALELDPTRSEVFRGLGGAYQSQGQHQMAFAS 348
Query: 305 FQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGAC------------------ 346
+Q I P L+ Y L + Y + G G+ A
Sbjct: 349 YQQAI---NLAPWDLLAYLKLGML-YEDLAVGKYEEAGDHAIRCFQYYLQHSGSEDTDVL 404
Query: 347 ----------LDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEK 396
LD SAV E AL D +++W NLANAY G+ + CL++
Sbjct: 405 TRLGNLQVMRLDPGSAV----ETYRRALAVDKSLSNVWFNLANAYLKLGEEEEAATCLKE 460
Query: 397 AAKLEPN---CMSTRYAVAVSRIKDAERSQEPTEQLSWA 432
+L+P+ +S RY +A S D R E ++QL++A
Sbjct: 461 KLRLDPDPNAGVSARYLLA-SLEADPGRLTE-SDQLAYA 497
>gi|94264126|ref|ZP_01287924.1| TPR repeat [delta proteobacterium MLMS-1]
gi|93455462|gb|EAT05656.1| TPR repeat [delta proteobacterium MLMS-1]
Length = 217
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 53/116 (45%), Gaps = 1/116 (0%)
Query: 215 SSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSL 274
++G + +EL PE+ ++ L+ ++++D W LG + + +I
Sbjct: 63 TAGGPEMSRELTPEQ-SRVMESLERAVEADPDNVQAWTQLGHLYFDTDHYSQAIKAYQRS 121
Query: 275 LAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKY 330
L ++P N D I +LG+ Y + G +++ F+ I H A N +LL +
Sbjct: 122 LQLEPENPDVITDLGVMYRRDGQPQKAIDAFEQAIAISPGHETARFNLGVVLLHDF 177
>gi|282164146|ref|YP_003356531.1| hypothetical protein MCP_1476 [Methanocella paludicola SANAE]
gi|282156460|dbj|BAI61548.1| conserved hypothetical protein [Methanocella paludicola SANAE]
Length = 348
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 79/342 (23%), Positives = 138/342 (40%), Gaps = 47/342 (13%)
Query: 230 LEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLG 289
+EE + KL++ +++D LGL G+ Q +I L + + + P N + +LG
Sbjct: 7 VEESIGKLQKMVEADPNNQEARMMLGLAYGTRGQYQEAIKELEAAVKMKPENPEAHFDLG 66
Query: 290 IAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCK---------YGSVLA----G 336
+AY D++ + K + + + +H A++N A L + ++A
Sbjct: 67 LAYNMMDDLDNAVKEYNETLRLKPDHLDAMLNLANAYLAMGNADDALGLFKDMIAKNPES 126
Query: 337 AGANTGEGACLDQASAVNVAKECLLAALKADPKA--AHIWANLANAYYLTGDHRSSGKCL 394
A G L A ++ A+E L A+ DP++ H++ LA Y G+ + K
Sbjct: 127 AEVFASFGVALASAGYLDDAEEMLKKAIAKDPRSFDGHLF--LAGVYMDKGEVDDAIKEY 184
Query: 395 EKAAKLEPNCMSTRYAVAVSRIKDAERSQEPTEQLSWAGNEMASILREGDPVQIEPPIAW 454
AA + P S Y + LS G M +I + V ++P
Sbjct: 185 RIAATISPEEPSVFYNWGFA--------------LSEKGLTMDAIEKYQIAVHLDP---- 226
Query: 455 AGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNV---AKECLLAAL- 510
GF + + A + +++++E A S F D + + V AKE AA+
Sbjct: 227 -GFVEARYNLASMLAKQNRLDEAITELKETIKADPS-FADAHNMLGVIYTAKEFTRAAIN 284
Query: 511 ------KADPKAAHIWANLANAYYLTGDHRSSGKCLEKVLMV 546
K DP A + NL YY + + K E+ L +
Sbjct: 285 ELEEAVKLDPDFAVAYNNLGMVYYGQEQYDEAIKVFEQALKI 326
Score = 43.5 bits (101), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 70/329 (21%), Positives = 118/329 (35%), Gaps = 73/329 (22%)
Query: 128 LGTSSSSREEKVSSLKTGLVHVARKM-PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEI 186
LG + +R + ++K + A KM P+N AHF LGL Y + AV Y +
Sbjct: 31 LGLAYGTRGQYQEAIKE--LEAAVKMKPENPEAHFDLGLAYNMMDDLDNAVKEYNET--- 85
Query: 187 LLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTR 246
LR +P+ L ++ A L + D++L K+ + +
Sbjct: 86 -LRL-----KPDHLD-AMLNLANAYLAMGNADDAL-------------GLFKDMIAKNPE 125
Query: 247 QAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQ 306
A V+ + G+ L +G L + +L +A DP + D L Y G+++ + K ++
Sbjct: 126 SAEVFASFGVALASAGYLDDAEEMLKKAIAKDPRSFDGHLFLAGVYMDKGEVDDAIKEYR 185
Query: 307 DLILKDQNHPAALINYAALL---------LCKY-----------------GSVLAGAG-- 338
P+ N+ L + KY S+LA
Sbjct: 186 IAATISPEEPSVFYNWGFALSEKGLTMDAIEKYQIAVHLDPGFVEARYNLASMLAKQNRL 245
Query: 339 ------------ANTGEGACLDQASAVNVAKECLLAAL-------KADPKAAHIWANLAN 379
A+ + + AKE AA+ K DP A + NL
Sbjct: 246 DEAITELKETIKADPSFADAHNMLGVIYTAKEFTRAAINELEEAVKLDPDFAVAYNNLGM 305
Query: 380 AYYLTGDHRSSGKCLEKAAKLEPNCMSTR 408
YY + + K E+A K++P +
Sbjct: 306 VYYGQEQYDEAIKVFEQALKIDPGYFEAQ 334
>gi|339501296|ref|YP_004699331.1| hypothetical protein Spica_2727 [Spirochaeta caldaria DSM 7334]
gi|338835645|gb|AEJ20823.1| Tetratricopeptide TPR_1 repeat-containing protein [Spirochaeta
caldaria DSM 7334]
Length = 1004
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 68/309 (22%), Positives = 120/309 (38%), Gaps = 39/309 (12%)
Query: 114 ALEFGVDADGDQSGLGTSSSSREEKVSSLKTGLVHVARKM---PKNAHAHFLLGLMYQRL 170
ALE ++ D + L + + +++S+ K + A+ + P+ A+ LG MY RL
Sbjct: 96 ALERAIELDPTRPELYYNLGNVYKQLSNYKAASMAYAKVIELDPRYVPAYNNLGTMYDRL 155
Query: 171 GQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEEL 230
+ KA + ++K D P L H L ES G +
Sbjct: 156 QESEKAFAIFQKG------LSLDRNNPVL------HFNYGLALESKG-----------KF 192
Query: 231 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 290
+E + + + +++S N LG++ LK GR ++ + + +L++DP N + N+G+
Sbjct: 193 DEAVREYEAALRSRPGWVEALNNLGILRLKQGRHSDALEIFNRILSIDPFNAEARNNIGV 252
Query: 291 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL--LCKYGSV------LAGAGANTG 342
+ G + ++ I D + A++N L + G L N+
Sbjct: 253 VFADQGKFNDAITNYRQAIEVDPKYVKAVVNLEHALESIGHQGDALIELEKLVKLVPNST 312
Query: 343 E-----GACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKA 397
E GA + A E AL+ DP AY G + C E+
Sbjct: 313 EVRINLGALYLKLQRYPEALEQATRALEWDPDNLQALRIQGAAYRAIGKDAEAQACFERI 372
Query: 398 AKLEPNCMS 406
+EP S
Sbjct: 373 LAIEPGNYS 381
Score = 45.8 bits (107), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 75/374 (20%), Positives = 130/374 (34%), Gaps = 77/374 (20%)
Query: 228 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 287
E+L + L L+ +++ D + ++ LG + + +++ + ++ +DP N
Sbjct: 88 EDLNKALDALERAIELDPTRPELYYNLGNVYKQLSNYKAASMAYAKVIELDPRYVPAYNN 147
Query: 288 LGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCK------------------ 329
LG Y + + E++ FQ + D+N+P NY L K
Sbjct: 148 LGTMYDRLQESEKAFAIFQKGLSLDRNNPVLHFNYGLALESKGKFDEAVREYEAALRSRP 207
Query: 330 -------------------------YGSVLA----GAGANTGEGACLDQASAVNVAKECL 360
+ +L+ A A G N A
Sbjct: 208 GWVEALNNLGILRLKQGRHSDALEIFNRILSIDPFNAEARNNIGVVFADQGKFNDAITNY 267
Query: 361 LAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAE 420
A++ DPK NL +A G + LEK KL PN R + +K +
Sbjct: 268 RQAIEVDPKYVKAVVNLEHALESIGHQGDALIELEKLVKLVPNSTEVRINLGALYLK-LQ 326
Query: 421 RSQEPTEQ----LSWAGNEMASILREGDPVQIEPPIAWAGFAAVQKTHHEVAAAFETEEN 476
R E EQ L W + + ++ +G A + A+ K E A FE
Sbjct: 327 RYPEALEQATRALEWDPDNLQALRIQG-----------AAYRAIGK-DAEAQACFE---- 370
Query: 477 ELSKMEECAGAGESAFLD------QASAVNVAKECLLAALKADPKAAHIWANLANAYYLT 530
++ S +LD Q A+E +LA L+ P+ + L Y T
Sbjct: 371 ---RILAIEPGNYSFYLDLADLHFQRKEYREAEERILAFLRRKPQDRNAKMMLGRLYVET 427
Query: 531 GDHRSSGKCLEKVL 544
G+ + E+++
Sbjct: 428 GNKAHAITIFEELI 441
Score = 40.0 bits (92), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 37/184 (20%), Positives = 67/184 (36%), Gaps = 25/184 (13%)
Query: 232 EILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIA 291
E L K S + R+A++ LG KSG+ ++ V SLL +P++ + + N+ +
Sbjct: 26 ERLLKYYLSKNKNDREALLL--LGSTYAKSGKYDEALDVFHSLLGSNPDDLEALNNIAVI 83
Query: 292 YFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQAS 351
Y + D+ ++ + I D P N G Q S
Sbjct: 84 YRKKEDLNKALDALERAIELDPTRPELYYNL---------------------GNVYKQLS 122
Query: 352 AVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN--CMSTRY 409
A ++ DP+ + NL Y + + +K L+ N + Y
Sbjct: 123 NYKAASMAYAKVIELDPRYVPAYNNLGTMYDRLQESEKAFAIFQKGLSLDRNNPVLHFNY 182
Query: 410 AVAV 413
+A+
Sbjct: 183 GLAL 186
>gi|344198703|ref|YP_004783029.1| hypothetical protein Acife_0495 [Acidithiobacillus ferrivorans SS3]
gi|343774147|gb|AEM46703.1| Tetratricopeptide TPR_2 repeat-containing protein
[Acidithiobacillus ferrivorans SS3]
Length = 545
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 63/124 (50%), Gaps = 6/124 (4%)
Query: 203 VQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSG 262
+Q HA L+ + +L+K+ +E E IL ++++ A LG +L K G
Sbjct: 427 IQPDHADALVNLGA---TLNKQGRWDEAETIL---RQAVAIKPEHADALINLGAVLSKQG 480
Query: 263 RLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINY 322
RL + ++L +A+ P+ D + NLG+ Q G +E++ FQ + + NH AL+N
Sbjct: 481 RLDEAETILRQAIAIKPDQVDALVNLGVILRQRGCLEEAEAAFQQALTANPNHSEALVNL 540
Query: 323 AALL 326
A +
Sbjct: 541 GATI 544
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 26/116 (22%), Positives = 48/116 (41%), Gaps = 21/116 (18%)
Query: 288 LGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL 347
L Y Q+G ++++ + +++++++ NH A N+ G
Sbjct: 63 LATHYHQTGRLKEAEQLYRNILVEQPNH---------------------AEVNSNMGVLA 101
Query: 348 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 403
Q VN A AL +DPK WAN Y TG + + L+++ ++ N
Sbjct: 102 SQTGRVNDALYFFQTALSSDPKNGKTWANYMMLLYNTGRIQEASSALQQSLAIDKN 157
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 65/169 (38%), Gaps = 26/169 (15%)
Query: 254 LGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQ 313
LG++L GR+ +I L + P + + LG+A G M+++ + +
Sbjct: 301 LGVMLSDQGRMDEAIGTFRKALIIKPGYREALMRLGVALGYQGRMDEAESTLRKALAIKS 360
Query: 314 NHPAALINYAALL-----------LCK--------YGSVLAGAGAN-TGEGACLDQASAV 353
++P A++N +L L + Y L GA + +G CLD+A +
Sbjct: 361 DYPEAIMNLGVILGHEGRWEETETLLRQALAIKPDYPEALMNLGAALSKQGRCLDEAETI 420
Query: 354 NVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 402
L AL P A NL G + L +A ++P
Sbjct: 421 ------LRQALAIQPDHADALVNLGATLNKQGRWDEAETILRQAVAIKP 463
>gi|304314872|ref|YP_003850019.1| tetratricopeptide repeat domain-containing protein
[Methanothermobacter marburgensis str. Marburg]
gi|302588331|gb|ADL58706.1| tetratricopeptide repeat domain-containing protein
[Methanothermobacter marburgensis str. Marburg]
Length = 406
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 74/185 (40%), Gaps = 13/185 (7%)
Query: 231 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 290
EE L + +Q + + WN GL+ + GR S+ L ++P + N G+
Sbjct: 203 EEALKCYDKVLQLNPQDDKAWNNKGLVFNELGRYDESLECYEKALQINPKLAEAWNNKGV 262
Query: 291 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL--LCKYGSVL-----------AGA 337
+ G E++ +C++ + D N +L L KY L A
Sbjct: 263 VLSELGRYEEALECYEKALEIDPEDDKTWNNKGLVLEELGKYEDALECFQKALEINPEFA 322
Query: 338 GANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKA 397
A +G L+ + +C ALK +P+ +W G H+ + KC EK+
Sbjct: 323 DAWKWKGIILEDLKEPEESLKCYKKALKLNPQNKTLWYMQGKTLQKLGKHKEALKCYEKS 382
Query: 398 AKLEP 402
K++P
Sbjct: 383 LKIDP 387
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 70/345 (20%), Positives = 122/345 (35%), Gaps = 50/345 (14%)
Query: 227 PEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIG 286
PE+ E K+ ++++ + A WN GL+L + GR ++ L ++P
Sbjct: 66 PEKALECYEKI---LKNNPKLAEAWNNKGLVLKELGRYDEALECYEKALKINPKYAGAWN 122
Query: 287 NLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGAC 346
N + + G +++ +C++ + + A N GSVL C
Sbjct: 123 NKALVLKELGRYDEALECYEKALQINPKLADAWYNK--------GSVLIYLKKYKKALKC 174
Query: 347 LDQASAVNV---------------------AKECLLAALKADPKAAHIWANLANAYYLTG 385
++A +N A +C L+ +P+ W N + G
Sbjct: 175 FEKAIELNPKNYRAWGTKGITLHNLKIYEEALKCYDKVLQLNPQDDKAWNNKGLVFNELG 234
Query: 386 DHRSSGKCLEKAAKLEPNCMS--TRYAVAVSRIKDAERSQEPTEQLSWAGNEMASILREG 443
+ S +C EKA ++ P V +S + E + E E+ E
Sbjct: 235 RYDESLECYEKALQINPKLAEAWNNKGVVLSELGRYEEALECYEKAL-----------EI 283
Query: 444 DPVQIEPPIAWAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGE--SAFLDQASAVNV 501
DP E W V + + A E + L E A A + L+
Sbjct: 284 DP---EDDKTWNNKGLVLEELGKYEDALECFQKALEINPEFADAWKWKGIILEDLKEPEE 340
Query: 502 AKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKVLMV 546
+ +C ALK +P+ +W G H+ + KC EK L +
Sbjct: 341 SLKCYKKALKLNPQNKTLWYMQGKTLQKLGKHKEALKCYEKSLKI 385
Score = 43.5 bits (101), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 67/310 (21%), Positives = 114/310 (36%), Gaps = 41/310 (13%)
Query: 259 LKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAA 318
LK G+ + ++ L PNN + + I + E++ +C++ ILK+ A
Sbjct: 27 LKQGKYKEALKEFRKALKARPNNPEILHYNAITLLKLKRPEKALECYEK-ILKNNPKLAE 85
Query: 319 LINYAALLLCKYGSVLAG--------------AGANTGEGACLDQASAVNVAKECLLAAL 364
N L+L + G AGA + L + + A EC AL
Sbjct: 86 AWNNKGLVLKELGRYDEALECYEKALKINPKYAGAWNNKALVLKELGRYDEALECYEKAL 145
Query: 365 KADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP---NCMSTRYAVAVSRIKDAER 421
+ +PK A W N + ++ + KC EKA +L P T+ + + +K E
Sbjct: 146 QINPKLADAWYNKGSVLIYLKKYKKALKCFEKAIELNPKNYRAWGTK-GITLHNLKIYEE 204
Query: 422 SQEPTEQLSWAGNEMASILREGDPVQIEPP--IAWAGFAAVQKTHHEVAAAFETEENELS 479
+ + +++ +Q+ P AW V + E E L
Sbjct: 205 ALKCYDKV----------------LQLNPQDDKAWNNKGLVFNELGRYDESLECYEKALQ 248
Query: 480 ---KMEECAGAGESAFLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSS 536
K+ E A + L + A EC AL+ DP+ W N G + +
Sbjct: 249 INPKLAE-AWNNKGVVLSELGRYEEALECYEKALEIDPEDDKTWNNKGLVLEELGKYEDA 307
Query: 537 GKCLEKVLMV 546
+C +K L +
Sbjct: 308 LECFQKALEI 317
>gi|430744814|ref|YP_007203943.1| serine/threonine protein kinase [Singulisphaera acidiphila DSM 18658]
gi|430016534|gb|AGA28248.1| serine/threonine protein kinase [Singulisphaera acidiphila DSM 18658]
Length = 1199
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 111/264 (42%), Gaps = 38/264 (14%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 213
P A AH LG G+ +AV+ YE A ++ + + +P
Sbjct: 828 PTFAKAHMNLGNELGNQGKWAEAVACYETATQL--------------------NPKDAVP 867
Query: 214 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 273
S +L K+ ++LEE ++ LK ++ D A LG+ L K +L +++ L
Sbjct: 868 HISLGVALSKQ---DKLEEAVASLKRAISLDPNYATAHYNLGVALSKQDKLDEAVASLKR 924
Query: 274 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSV 333
+A+DPN NLG AY + ++++ ++ I ++N+ +A +N L+ + G +
Sbjct: 925 TIALDPNYATAHYNLGNAYSEQRKLDEAVTSYRRAIELNRNYTSAHLNLGNELI-RQGKL 983
Query: 334 LAG--------------AGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLAN 379
+ A A+ G L + + A A+K DPK A + L
Sbjct: 984 VDAVTSFKRVIELDSNHARAHNQLGIALRRLKRWDEAVTAHRTAIKLDPKYARAYHELGV 1043
Query: 380 AYYLTGDHRSSGKCLEKAAKLEPN 403
G+ + ++A +LEPN
Sbjct: 1044 TLQAQGELGEAITSYKRAIELEPN 1067
Score = 43.5 bits (101), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 107/268 (39%), Gaps = 45/268 (16%)
Query: 136 EEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIA 195
+E V+SLK + P A AH+ LG Y + +AV+SY +A E+
Sbjct: 916 DEAVASLKRTIA----LDPNYATAHYNLGNAYSEQRKLDEAVTSYRRAIELNRNY----- 966
Query: 196 RPELLSLVQIHHAQCLLPESSGDNSLDKELEPE-ELEEILSKLKESMQSDTRQAVVWNTL 254
+S +L EL + +L + ++ K ++ D+ A N L
Sbjct: 967 -------------------TSAHLNLGNELIRQGKLVDAVTSFKRVIELDSNHARAHNQL 1007
Query: 255 GLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQN 314
G+ L + R +++ + + +DP LG+ G++ ++ ++ I + N
Sbjct: 1008 GIALRRLKRWDEAVTAHRTAIKLDPKYARAYHELGVTLQAQGELGEAITSYKRAIELEPN 1067
Query: 315 HPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIW 374
+ L + A LL A GE D A AV +A+ A+ P
Sbjct: 1068 NTERLADLAWLL------------ATCGEVKHRDPAGAVELAQR----AVDLSPDDDFHQ 1111
Query: 375 ANLANAYYLTGDHRSSGKCLEKAAKLEP 402
A L A+Y G+ +++ L + +L P
Sbjct: 1112 AALGVAHYRVGNWKNAVAALSRGMELRP 1139
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 107/269 (39%), Gaps = 41/269 (15%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIH-HAQCLL 212
P++A AH +LG+ + G+ +AV+SYE+A L+L H A C L
Sbjct: 692 PQSAAAHNVLGIALKVQGKFGEAVASYERA----------------LTLDPKHVPAHCNL 735
Query: 213 PESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLS 272
+ + ++LEE ++ + ++ D A LG L G+L ++
Sbjct: 736 GGAL--------MAQQKLEEANARFRAAIALDPNSAPAHTGLGWALCDQGKLDEAVESGR 787
Query: 273 SLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGS 332
+A+D + NLG A ++++ C++ I D A +N G+
Sbjct: 788 RAIALDSKSASAHYNLGRALALQKKLDEAISCYRQAIALDPTFAKAHMN--------LGN 839
Query: 333 VLAGAGANTGEGACLDQASAVN----VAKECLLAALKADPKAAHIWANLANAYYLTGD-- 386
L G AC + A+ +N V L AL K A+L A L +
Sbjct: 840 ELGNQGKWAEAVACYETATQLNPKDAVPHISLGVALSKQDKLEEAVASLKRAISLDPNYA 899
Query: 387 --HRSSGKCLEKAAKLEPNCMSTRYAVAV 413
H + G L K KL+ S + +A+
Sbjct: 900 TAHYNLGVALSKQDKLDEAVASLKRTIAL 928
>gi|254000485|ref|YP_003052548.1| hypothetical protein Msip34_2784 [Methylovorus glucosetrophus
SIP3-4]
gi|253987164|gb|ACT52021.1| TPR repeat-containing protein [Methylovorus glucosetrophus SIP3-4]
Length = 560
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 228 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 287
++ E LSK S+ D Q W +G I L++ + Q + + +L +DP+N D I
Sbjct: 33 QDYFEALSKYTASLSLDGNQVPTWVRIGKIFLRTMKYQQARETMEFVLGMDPHNVDAIYG 92
Query: 288 LGIAYFQSGDMEQSAKCFQD 307
L I+YF G +E+ A+ F D
Sbjct: 93 LAISYFYLGKLEE-ARAFID 111
>gi|442318341|ref|YP_007358362.1| hypothetical protein MYSTI_01330 [Myxococcus stipitatus DSM 14675]
gi|441485983|gb|AGC42678.1| hypothetical protein MYSTI_01330 [Myxococcus stipitatus DSM 14675]
Length = 639
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 111/287 (38%), Gaps = 32/287 (11%)
Query: 151 RKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIH---- 206
R P +A A + LG + L +P KAV K L+ E ++ P L +
Sbjct: 36 RASPDDADALYRLGTAFLALNKPKKAVEPLTK----LVELEPELIPPRLALARAVRLAGD 91
Query: 207 --HAQCLLPESSGDNSLDKELEPE---------ELEEILSKLKESMQSDTRQAVVWNTLG 255
A+ LL +S D L E E + +S+ +++ + A + LG
Sbjct: 92 AGKARTLLDQSIAAFPEDMSLRAERGLLARVLDETDVAISQYSIAVELAPKDAELRFNLG 151
Query: 256 LILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNH 315
L ++ R +I L +D NLG A + G ++ + ++ +
Sbjct: 152 EALQRANRTDDAIEAYREALKLDSKLNVARVNLGKALAEKGLNAEAKETLREATREKLGD 211
Query: 316 PAALINYAALLL---------CKYGSVLAG----AGANTGEGACLDQASAVNVAKECLLA 362
A N +LL +Y LA A A+ G L++ A E L
Sbjct: 212 AEAHYNLGVILLRENDYDGAIGEYQRALAAEPKHARAHNNLGVALNEKGDPRKATEAFLK 271
Query: 363 ALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRY 409
A+ ADPK A NL AY+ GD+ + K EKA LEP S Y
Sbjct: 272 AISADPKYAEAHFNLGLAYFQLGDNVRATKSFEKALVLEPRRSSGPY 318
Score = 39.3 bits (90), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 60/141 (42%), Gaps = 17/141 (12%)
Query: 174 LKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEI 233
L A+ Y AE L E + A L+ + I H++ P+ L ELE +
Sbjct: 464 LMAMGDYPGAETYLRPKEGEEADTAALARLGIVHSRRGRPD----------LAVTELEAV 513
Query: 234 LSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYF 293
++K D Q LG + L+ G + VL +L+V+P N + LG A +
Sbjct: 514 VAK-------DPAQIEARAELGNLYLRGGDGAKARQVLGDVLSVEPRNALALLYLGHALY 566
Query: 294 QSGDMEQSAKCFQDLILKDQN 314
Q G + + K F+ + D N
Sbjct: 567 QQGKTKDAEKSFRASVQVDPN 587
>gi|392413349|ref|YP_006449956.1| tetratricopeptide repeat protein [Desulfomonile tiedjei DSM 6799]
gi|390626485|gb|AFM27692.1| tetratricopeptide repeat protein [Desulfomonile tiedjei DSM 6799]
Length = 644
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 75/171 (43%), Gaps = 21/171 (12%)
Query: 238 KESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGD 297
+++++ A + N LG L ++G + ++ L + ++P D N G+ +F+ G+
Sbjct: 485 QQALEIQPNFATLHNNLGFALHEAGETELALEHLHKAMELNPQMPDAFNNAGLVFFRLGN 544
Query: 298 MEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAK 357
+++ F I + HP + YA L G+ L QA+ + A
Sbjct: 545 TQKAIDYFTRAI---ELHPGFVPAYANL------------------GSALIQANRIPDAI 583
Query: 358 ECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTR 408
L AL+ DP +A NL AYY +GD + + K ++EP R
Sbjct: 584 RILSKALQLDPYSAQTHNNLGFAYYRSGDSPKAVEHFRKTLEIEPGFQEAR 634
>gi|296081161|emb|CBI18187.3| unnamed protein product [Vitis vinifera]
Length = 325
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 69/143 (48%)
Query: 176 AVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILS 235
V ++ ++L+R E D++ EL V+ A G L ++ P + +L
Sbjct: 158 GVGTFFVIRQVLVRRELDLSAKELQEQVRSGDASATELFELGAVMLRRKFYPAATKFLLQ 217
Query: 236 KLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQS 295
+++ D A V+N LG+ ++ G+L+ I+ + + + P NLG AY +
Sbjct: 218 AIEKWDGDDQDLAQVYNALGVSYVRDGKLEKGITQFENAVKLQPGYVTAWNNLGDAYEKK 277
Query: 296 GDMEQSAKCFQDLILKDQNHPAA 318
D++ + K F++++L D N+ A
Sbjct: 278 KDLKSALKAFEEVLLFDPNNKVA 300
>gi|340506921|gb|EGR32964.1| hypothetical protein IMG5_065320 [Ichthyophthirius multifiliis]
Length = 384
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 87/202 (43%), Gaps = 24/202 (11%)
Query: 225 LEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDC 284
+E EE ++ KE+++ + R + + +G I K+ Q ++ L D N+ +
Sbjct: 110 IEKEEYKKATEAFKETLKINPRFSGAFKAIGSIFYKNNSEQIALKYYQKALECDQNDIE- 168
Query: 285 IGNLGIA--YFQSGDMEQSAKCFQDLILKDQNHPA----------------ALINYAALL 326
+GIA Y+ + + + + +++++ +QN A+I+Y L
Sbjct: 169 -SKIGIANCYYLIENFDLAIQYYKEILQIEQNEEIEYNLGNCYYMKSQIDNAVIHYQNCL 227
Query: 327 LCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGD 386
+ N G C+ Q A EC L ++ DP+ + NLAN YYL D
Sbjct: 228 KINFQK--PDCLYNLGNVYCIKQDFYK--ALECFLQTIQYDPENSAALYNLANTYYLLDD 283
Query: 387 HRSSGKCLEKAAKLEPNCMSTR 408
+ + EKA K+EP + R
Sbjct: 284 YELACDYFEKAIKIEPGNVQWR 305
>gi|224588324|gb|ACN58948.1| hypothetical protein AKSOIL_0107 [uncultured bacterium BLR7]
Length = 428
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 78/194 (40%), Gaps = 21/194 (10%)
Query: 231 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 290
+ L+ E+++ D A + G+ G +I S + +DP + GN GI
Sbjct: 232 DRALADYDEAIRLDPNYAEAYGNRGVSFKAKGDNDRAILEYSKAIELDPKFANAFGNRGI 291
Query: 291 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQA 350
AY+ GD E + + + D ++P N C LA AG
Sbjct: 292 AYYDKGDYEHAIQDDDQAVKLDPDNPERYNN-----RC---YALATAG------------ 331
Query: 351 SAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYA 410
A +C + AL P AA +W + AY G +R S + + A +L P Y
Sbjct: 332 RAQEALADCNI-ALARSPDAAFMWDSRGYAYLRLGQYRRSIEDYDAALRLNPTHAQALYG 390
Query: 411 VAVSRIKDAERSQE 424
V+++K+ + S +
Sbjct: 391 RGVAKLKNGDASGQ 404
Score = 39.3 bits (90), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 41/196 (20%), Positives = 77/196 (39%), Gaps = 22/196 (11%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
+ + ++ ++ D A ++ G++ +I+ + +DP
Sbjct: 162 DYDRAIADFARAIAIDPNDATSFSDRGMVFSNKKDYARAIADYDQAIKLDPKLTYAFNGR 221
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLD 348
G Y GD +++ + + I D N+ A N G G N + A L+
Sbjct: 222 GTVYNALGDDDRALADYDEAIRLDPNYAEAYGN--------RGVSFKAKGDN--DRAILE 271
Query: 349 QASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTR 408
+ A+ + DPK A+ + N AYY GD+ + + ++A KL+P+ R
Sbjct: 272 YSKAIEL-----------DPKFANAFGNRGIAYYDKGDYEHAIQDDDQAVKLDPDN-PER 319
Query: 409 YAVAVSRIKDAERSQE 424
Y + A R+QE
Sbjct: 320 YNNRCYALATAGRAQE 335
>gi|196012190|ref|XP_002115958.1| hypothetical protein TRIADDRAFT_59913 [Trichoplax adhaerens]
gi|190581734|gb|EDV21810.1| hypothetical protein TRIADDRAFT_59913 [Trichoplax adhaerens]
Length = 1265
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 93/208 (44%), Gaps = 40/208 (19%)
Query: 141 SLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPEL- 199
SLK L + AH++ LG+ Y+R G+ +A+S ++K+ EI L + P+L
Sbjct: 1046 SLKIRLSLFGHNHHQVAHSYSSLGICYRRQGKYKEAISMHKKSLEIRLSVQGH-NHPDLV 1104
Query: 200 LSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQ--------SDTRQAVVW 251
++ V I G+ LD+ + EE +S K S++ + + A ++
Sbjct: 1105 MTYVNI-----------GNVYLDQ----GKYEESISMYKNSLKIQLSILGDNHSDLAAIY 1149
Query: 252 NTLGLILLKSGRLQSSISVLSSLLAVD--------PNNCDCIGNLGIAYFQSGDMEQSAK 303
N +G K G+L+ +IS LL V P+ D NLG Y + E++
Sbjct: 1150 NNMGNAYFKQGKLKEAISTYKKLLKVQCSFLGHNHPSIADSYSNLGAIYCDQKNHEEAIS 1209
Query: 304 CFQD------LILKDQNHPAALINYAAL 325
F+ L+L D NHPA Y A+
Sbjct: 1210 MFKKSLRIRRLVL-DHNHPAIASLYFAI 1236
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 115/282 (40%), Gaps = 48/282 (17%)
Query: 141 SLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEAD-----IA 195
SL+ L + + P A ++ LG +YQ + A+S Y+K+ +I L D A
Sbjct: 250 SLQIRLSALGQTHPDVAKSYNNLGKIYQSQKKYKVAISLYKKSLKIKLSALGDNHLDVAA 309
Query: 196 RPELLSLVQIHHAQCLLPESSGDNSLDKE---LEPEELEEILSKLKESMQSDTRQAVVWN 252
+ L +V GD KE + + L+ LS L + D Q+ +N
Sbjct: 310 SYDNLGIVY------------GDQGKHKEAISMLEKSLKIRLSALGHN-HPDVTQS--YN 354
Query: 253 TLGLILLKSGRLQSSISVLSSLLAV--------DPNNCDCIGNLGIAYFQSGDMEQSAKC 304
+G I K G+L+ +IS+L L + P+ NLG Y E++
Sbjct: 355 NIGTIYRKQGKLEEAISMLEKSLKIRLSAHGHNHPDVAASYYNLGWVYCDQNKYEKAISV 414
Query: 305 FQD-----LILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKEC 359
F++ L + D NHP +Y ++ G V N E A S + +
Sbjct: 415 FEESLKIRLSVYDHNHPDVARSYNSI-----GIVY--RNQNKHEEAI----SMYEKSLKI 463
Query: 360 LLAALKADP-KAAHIWANLANAYYLTGDHRSSGKCLEKAAKL 400
L+ L ++ A ++ N+ N YY G + + EK+ K+
Sbjct: 464 YLSTLGSNHLDVAALYNNIGNIYYNQGKYEDAISMYEKSHKI 505
>gi|159906168|ref|YP_001549830.1| hypothetical protein MmarC6_1787 [Methanococcus maripaludis C6]
gi|159887661|gb|ABX02598.1| TPR repeat-containing protein [Methanococcus maripaludis C6]
Length = 543
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/314 (19%), Positives = 113/314 (35%), Gaps = 65/314 (20%)
Query: 231 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 290
EE + ++++S++ + VW GL L GR + +I + + +D N+ D N G+
Sbjct: 220 EESIECYDKALKSNSGYSYVWYNKGLALYDMGRYEEAIGCYNRAIELDSNDIDSWNNKGL 279
Query: 291 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQA 350
A + G E++ C+ + D N+ + N +G L
Sbjct: 280 ALYDLGRYEEAIVCYDRALELDSNYSDSQYN---------------------KGLALQYL 318
Query: 351 SAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYA 410
+ A C L+ +P+ W N + + G + + +C +K+ +L P
Sbjct: 319 ERYDEAIVCYDKTLELNPEDTDSWCNKGISLHEVGRYEEAIECYDKSLELNP-------- 370
Query: 411 VAVSRIKDAERSQEPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFAAVQKTHHEVAAA 470
E + L GN + + R + VQ + H++ A
Sbjct: 371 -------------EDVDILYNKGNSLYDLGRYEEAVQFYNNALNINSSCSDAWHNKGLAL 417
Query: 471 FETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLT 530
++L K EE G C A++ P + W N N+ Y
Sbjct: 418 -----HDLGKYEEAIG------------------CYNRAIELGPNNSDSWNNKGNSLYDL 454
Query: 531 GDHRSSGKCLEKVL 544
G + + +C +K L
Sbjct: 455 GRYEEAIECYDKSL 468
Score = 43.1 bits (100), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 92/256 (35%), Gaps = 65/256 (25%)
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLD 348
G+ Y+ + + E+S +CF + + D A N +L Y S
Sbjct: 40 GLNYYDNENYEKSIECFNNALELDPYDKTAWFNKGYILYGIYRS---------------- 83
Query: 349 QASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTR 408
N A C L+ DP+A W YY +++ + +CL+KA +L+P +
Sbjct: 84 -----NEALVCFDKVLELDPEAFDAWLYKGYTYYDLDNYQKTIECLDKALELDPENLDAY 138
Query: 409 YAVAVSRIKDAERSQEPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFAAVQKTHHEVA 468
Y S ER +E E + A +++ P T+ +
Sbjct: 139 YCEGDSYYF-LERYEESLECYNRA-------------LELNP------------TYTSLL 172
Query: 469 AAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKADPKAAHIWANLANAYY 528
T ++L + EE A C ALK DP A+ +N + Y
Sbjct: 173 VDKGTSLHKLGRYEE------------------AIICYDKALKIDPNYAYALSNKGLSLY 214
Query: 529 LTGDHRSSGKCLEKVL 544
G + S +C +K L
Sbjct: 215 DLGRYEESIECYDKAL 230
Score = 42.0 bits (97), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 41/190 (21%), Positives = 76/190 (40%), Gaps = 21/190 (11%)
Query: 228 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 287
E +E + ++++ + W G+ L + GR + +I L ++P + D + N
Sbjct: 319 ERYDEAIVCYDKTLELNPEDTDSWCNKGISLHEVGRYEEAIECYDKSLELNPEDVDILYN 378
Query: 288 LGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL 347
G + + G E++ + + + A IN S + A N +G L
Sbjct: 379 KGNSLYDLGRYEEAVQFYNN---------ALNIN----------SSCSDAWHN--KGLAL 417
Query: 348 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 407
A C A++ P + W N N+ Y G + + +C +K+ +L PN T
Sbjct: 418 HDLGKYEEAIGCYNRAIELGPNNSDSWNNKGNSLYDLGRYEEAIECYDKSLELNPNYSDT 477
Query: 408 RYAVAVSRIK 417
Y +S K
Sbjct: 478 WYNKGLSLCK 487
Score = 42.0 bits (97), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 72/186 (38%), Gaps = 15/186 (8%)
Query: 232 EILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIA 291
E L + ++ D W G Q +I L L +DP N D G +
Sbjct: 85 EALVCFDKVLELDPEAFDAWLYKGYTYYDLDNYQKTIECLDKALELDPENLDAYYCEGDS 144
Query: 292 YFQSGDMEQSAKCFQDLILKDQNHPAALIN----------YAALLLCKYGSVLA----GA 337
Y+ E+S +C+ + + + + L++ Y ++C Y L A
Sbjct: 145 YYFLERYEESLECYNRALELNPTYTSLLVDKGTSLHKLGRYEEAIIC-YDKALKIDPNYA 203
Query: 338 GANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKA 397
A + +G L + EC ALK++ +++W N A Y G + + C +A
Sbjct: 204 YALSNKGLSLYDLGRYEESIECYDKALKSNSGYSYVWYNKGLALYDMGRYEEAIGCYNRA 263
Query: 398 AKLEPN 403
+L+ N
Sbjct: 264 IELDSN 269
>gi|386813992|ref|ZP_10101216.1| conserved hypothetical protein [planctomycete KSU-1]
gi|386403489|dbj|GAB64097.1| conserved hypothetical protein [planctomycete KSU-1]
Length = 332
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 83/195 (42%), Gaps = 23/195 (11%)
Query: 230 LEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLG 289
+E + K+S+ + +N +GL + G ++I ++ P+N D NLG
Sbjct: 71 FDEAIEMFKKSLAKNPNNTDAYNNIGLAYAQKGMFDNAIEAFQKVIEQKPDNVDAYYNLG 130
Query: 290 IAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQ 349
AYF +G +++ + F+ + +H +A S+L A + G+
Sbjct: 131 SAYFDTGRFDKAIESFKKTVQIKPDHRSAY------------SLLGIAYSKIGK------ 172
Query: 350 ASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRY 409
+ A + L ++ DP A +NL Y + G + + + KA +++P S Y
Sbjct: 173 ---YDDAIQILKKRIELDPNLAIAHSNLGIVYSMKGMDKEAMEEYTKALEIDPGHESALY 229
Query: 410 AVAV--SRIKDAERS 422
A+ + D +R+
Sbjct: 230 NTALLYDKTGDTDRA 244
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 63/149 (42%), Gaps = 21/149 (14%)
Query: 255 GLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQN 314
GL + G +I + LA +PNN D N+G+AY Q G + + + FQ +I + +
Sbjct: 62 GLHYAQYGLFDEAIEMFKKSLAKNPNNTDAYNNIGLAYAQKGMFDNAIEAFQKVIEQKPD 121
Query: 315 HPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIW 374
+ A N L A +TG D+A E ++ P +
Sbjct: 122 NVDAYYN------------LGSAYFDTGR---FDKAI------ESFKKTVQIKPDHRSAY 160
Query: 375 ANLANAYYLTGDHRSSGKCLEKAAKLEPN 403
+ L AY G + + + L+K +L+PN
Sbjct: 161 SLLGIAYSKIGKYDDAIQILKKRIELDPN 189
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 96/249 (38%), Gaps = 40/249 (16%)
Query: 152 KMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCL 211
K P N A+ +GL Y + G A+ +++K E +P+ + A
Sbjct: 84 KNPNNTDAYNNIGLAYAQKGMFDNAIEAFQKVIE---------QKPDNVD------AYYN 128
Query: 212 LPESSGDNS-LDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISV 270
L + D DK +E K+++Q ++ LG+ K G+ +I +
Sbjct: 129 LGSAYFDTGRFDKAIES---------FKKTVQIKPDHRSAYSLLGIAYSKIGKYDDAIQI 179
Query: 271 LSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKY 330
L + +DPN NLGI Y G +++ + + + D H +AL N ALL K
Sbjct: 180 LKKRIELDPNLAIAHSNLGIVYSMKGMDKEAMEEYTKALEIDPGHESALYN-TALLYDKT 238
Query: 331 GSV--------------LAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWAN 376
G ++ A A G + + A A+ +P A I+ +
Sbjct: 239 GDTDRAIQYYIKATEANVSNADAQYRLGKNYIKKKQYDDAINAFQIAVMTNPDNAEIYQD 298
Query: 377 LANAYYLTG 385
+ NAY G
Sbjct: 299 IGNAYKAKG 307
>gi|225460696|ref|XP_002270347.1| PREDICTED: uncharacterized protein LOC100243534 [Vitis vinifera]
Length = 341
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 69/143 (48%)
Query: 176 AVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILS 235
V ++ ++L+R E D++ EL V+ A G L ++ P + +L
Sbjct: 174 GVGTFFVIRQVLVRRELDLSAKELQEQVRSGDASATELFELGAVMLRRKFYPAATKFLLQ 233
Query: 236 KLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQS 295
+++ D A V+N LG+ ++ G+L+ I+ + + + P NLG AY +
Sbjct: 234 AIEKWDGDDQDLAQVYNALGVSYVRDGKLEKGITQFENAVKLQPGYVTAWNNLGDAYEKK 293
Query: 296 GDMEQSAKCFQDLILKDQNHPAA 318
D++ + K F++++L D N+ A
Sbjct: 294 KDLKSALKAFEEVLLFDPNNKVA 316
>gi|188996284|ref|YP_001930535.1| hypothetical protein SYO3AOP1_0336 [Sulfurihydrogenibium sp.
YO3AOP1]
gi|188931351|gb|ACD65981.1| Tetratricopeptide TPR_2 repeat protein [Sulfurihydrogenibium sp.
YO3AOP1]
Length = 557
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 48/97 (49%), Gaps = 3/97 (3%)
Query: 237 LKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSG 296
LK+S+Q D + VW LG I +SG +I + ++L DPNN + + L Y
Sbjct: 187 LKKSLQIDKKYKPVWQLLGEIYRQSGNYDKAIEIYKNILKDDPNNLEALNRLFQIYVDKD 246
Query: 297 DMEQSAKCFQDLI-LKDQNHPAALINYAALLLCKYGS 332
D +A+ +I L +++ A L + LL KYG
Sbjct: 247 DFNNAAETIDKIIRLNPKDNDAILKKF--LLYIKYGK 281
>gi|118362609|ref|XP_001014531.1| TPR Domain containing protein [Tetrahymena thermophila]
gi|89296298|gb|EAR94286.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
Length = 1163
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 72/333 (21%), Positives = 128/333 (38%), Gaps = 43/333 (12%)
Query: 254 LGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQD------ 307
LG I + G L +I L++D N C NLGI ++G ++++ K FQ+
Sbjct: 679 LGNIYQQKGMLDEAIKQFQKYLSIDSENDTCQMNLGICLEKTGKLDEAIKQFQNCLDLNP 738
Query: 308 ------LILKDQNHPAALINYAALLLCKYGSVLAGAGAN----TGEGACLDQASAVNVAK 357
L + D A+IN A + Y L N G CL+ ++ +N A
Sbjct: 739 KNEICYLKIGDVYRKKAMINEA---ISAYKKCLEINPKNDICCLSLGICLENSNKINEAI 795
Query: 358 ECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIK 417
EC L ++ +P+ + NL N Y + + + K + P S Y + ++ K
Sbjct: 796 ECYLNCIEINPQNDICYMNLGNLYQNQNELDKAIESYYKCLNVNPQLDSCYYYLGEAQYK 855
Query: 418 DA---ERSQEPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFAAVQKTH---------- 464
+ E + + L N A L G Q + I A + +
Sbjct: 856 KSLFDESIKSYLKCLEINPNNEACYLSLGQTYQNQGMINEAILIYEKSLNLNIKIDVCCL 915
Query: 465 -----HEVAAAFETEENELSKMEECAGAGESAFLDQASA------VNVAKECLLAALKAD 513
+E+ + + + E A + FL+ +A + A + L+ +
Sbjct: 916 NLGVCYEIKGRIDEAIKKYQQSIEINPANDVCFLNLGNAYLNKGMFDEAIQAYQKCLQLN 975
Query: 514 PKAAHIWANLANAYYLTGDHRSSGKCLEKVLMV 546
PK + NL N Y + G+ + KC +K +++
Sbjct: 976 PKKEACYLNLGNVYQIKGELDKAIKCYQKCIIL 1008
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 53/255 (20%), Positives = 108/255 (42%), Gaps = 28/255 (10%)
Query: 66 NEDSNHSSSHHDKGSILMSKEMDVAEVEGKKINKLGKCRSRISSKMDSALEFGVDADGDQ 125
N + N+ + + G + + + + I + KC R++ K D+ L F + +
Sbjct: 395 NLNPNYDVCYFNLGIV-----YKIKRIYDEAIKQFQKCL-RLNRKYDACL-FNLGISYKK 447
Query: 126 SGLGTSSSSREEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEE 185
G+ + + +K SL PK H+ LG+ Y++ G +A+ S++ +
Sbjct: 448 KGMLNKAIKQYKKCLSLN----------PKYDACHYNLGIAYKKKGMVDEALKSFQDCID 497
Query: 186 ILLR---CEADIARPELL------SLVQIHHAQCLLP--ESSGDNSLDKELEPEELEEIL 234
+ + C +I L+ ++ Q L P E+ N + +EE +
Sbjct: 498 LNPKYGACYYNIGNIYLMKDLLEEAIAQYQKCLTLDPNYEACFFNLGVIYKKKCMIEEAV 557
Query: 235 SKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQ 294
+ ++ + + + + LGLI + G + +I + L ++PN C +LG+AY
Sbjct: 558 NLFEKCLSLNQKYYACYYNLGLIQNEKGIIDEAIKLFLKCLDINPNFDACYYSLGVAYKN 617
Query: 295 SGDMEQSAKCFQDLI 309
G + + K FQ+ I
Sbjct: 618 KGMLNDAIKQFQNCI 632
Score = 43.1 bits (100), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 78/181 (43%), Gaps = 17/181 (9%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQ--------- 204
PK + LG +YQ G+ KA+ Y+K I+L + DI L + Q
Sbjct: 976 PKKEACYLNLGNVYQIKGELDKAIKCYQKC--IILNPKKDICYLNLGNAYQNKGNLEESI 1033
Query: 205 IHHAQCLLPESSGDNSLDKELEPEE----LEEILSKLKESMQSDTRQAVVWNTLGLILLK 260
++ +CL D L+ + +EE + + + +Q + + + LG K
Sbjct: 1034 KNYQKCLNLNPKNDTCLENLGNAFKNKGMIEEAIKQYRFCLQLNPNKYSCYLNLGNTYQK 1093
Query: 261 SGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSA-KCFQDLILKDQNHPAAL 319
G L +I + + ++PNN NLG+ Y S DM+ A K FQ + + N+ L
Sbjct: 1094 KGMLDEAIECYNKCININPNNETSYANLGLCYL-SKDMKYDAIKQFQKCLQINPNNKTCL 1152
Query: 320 I 320
I
Sbjct: 1153 I 1153
Score = 42.0 bits (97), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 61/282 (21%), Positives = 99/282 (35%), Gaps = 61/282 (21%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 213
P N + LG YQ G +A+ YEK+ + L + D+ L +I
Sbjct: 874 PNNEACYLSLGQTYQNQGMINEAILIYEKS--LNLNIKIDVCCLNLGVCYEIKG------ 925
Query: 214 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 273
++E + K ++S++ + V + LG L G +I
Sbjct: 926 ---------------RIDEAIKKYQQSIEINPANDVCFLNLGNAYLNKGMFDEAIQAYQK 970
Query: 274 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSV 333
L ++P C NLG Y G+++++ KC+Q I+ + P I Y L G+
Sbjct: 971 CLQLNPKKEACYLNLGNVYQIKGELDKAIKCYQKCIILN---PKKDICYLNL-----GNA 1022
Query: 334 LAGAG--------------ANTGEGACLDQA-----------SAVNVAKECLLAALKADP 368
G N CL+ A+ + C L+ +P
Sbjct: 1023 YQNKGNLEESIKNYQKCLNLNPKNDTCLENLGNAFKNKGMIEEAIKQYRFC----LQLNP 1078
Query: 369 KAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYA 410
+ NL N Y G + +C K + PN T YA
Sbjct: 1079 NKYSCYLNLGNTYQKKGMLDEAIECYNKCININPN-NETSYA 1119
Score = 42.0 bits (97), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 103/269 (38%), Gaps = 50/269 (18%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLS----LVQIHHAQ 209
P+N + LG +YQ + KA+ SY K + P+L S L + + +
Sbjct: 806 PQNDICYMNLGNLYQNQNELDKAIESYYKCLNV---------NPQLDSCYYYLGEAQYKK 856
Query: 210 CLLPESSGDNSLDKELEPEE----------------LEEILSKLKESMQSDTRQAVVWNT 253
L ES E+ P + E + ++S+ + + V
Sbjct: 857 SLFDESIKSYLKCLEINPNNEACYLSLGQTYQNQGMINEAILIYEKSLNLNIKIDVCCLN 916
Query: 254 LGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQ 313
LG+ GR+ +I + ++P N C NLG AY G +++ + +Q + +
Sbjct: 917 LGVCYEIKGRIDEAIKKYQQSIEINPANDVCFLNLGNAYLNKGMFDEAIQAYQKCLQLNP 976
Query: 314 NHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHI 373
A +N G+V G LD+ A+ ++C++ +PK
Sbjct: 977 KKEACYLN--------LGNVYQIKGE-------LDK--AIKCYQKCII----LNPKKDIC 1015
Query: 374 WANLANAYYLTGDHRSSGKCLEKAAKLEP 402
+ NL NAY G+ S K +K L P
Sbjct: 1016 YLNLGNAYQNKGNLEESIKNYQKCLNLNP 1044
Score = 40.4 bits (93), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 81/185 (43%), Gaps = 10/185 (5%)
Query: 231 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 290
+E + + ++ ++ + + LG+ K G L +I L+++P C NLGI
Sbjct: 418 DEAIKQFQKCLRLNRKYDACLFNLGISYKKKGMLNKAIKQYKKCLSLNPKYDACHYNLGI 477
Query: 291 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLD-- 348
AY + G ++++ K FQD I + + A N + L K +L A A + LD
Sbjct: 478 AYKKKGMVDEALKSFQDCIDLNPKYGACYYNIGNIYLMK--DLLEEAIAQYQKCLTLDPN 535
Query: 349 -QASAVNVA----KECLL-AALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 402
+A N+ K+C++ A+ K + YY G ++ +++A KL
Sbjct: 536 YEACFFNLGVIYKKKCMIEEAVNLFEKCLSLNQKYYACYYNLGLIQNEKGIIDEAIKLFL 595
Query: 403 NCMST 407
C+
Sbjct: 596 KCLDI 600
>gi|388841092|gb|AFK79142.1| hypothetical protein PCC8801_1300 [uncultured bacterium F39-01]
Length = 645
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 70/173 (40%), Gaps = 57/173 (32%)
Query: 237 LKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSG 296
L+ +++ AV +N LG L K+GR Q +I + + ++PN+ + + NLG AY+ +
Sbjct: 274 LRNAVRLKGDDAVAYNNLGASLYKAGRYQEAIEAFGNAVRLNPNDVEALNNLGAAYYVTA 333
Query: 297 DMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVA 356
+++ + FQ AV V
Sbjct: 334 QYDRALQNFQ--------------------------------------------QAVRV- 348
Query: 357 KECLLAALKAD-PKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTR 408
KAD P A + NL NAYY+TG +R + +A +L+ + + R
Sbjct: 349 --------KADSPDAQY---NLGNAYYMTGKYREATAAYRQAIQLKADYVEAR 390
Score = 42.0 bits (97), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 63/150 (42%), Gaps = 29/150 (19%)
Query: 163 LGLMYQRLGQPLKAVSSYEKAEEILLRC---EADIARPELLSLVQIHHAQCLLPESSGDN 219
LG +Y +LGQ Y++A ++L R AD A Q + L
Sbjct: 471 LGAVYNKLGQ-------YQEAVDVLRRAVQGNADFAE------AQYNLGTALYNRG---- 513
Query: 220 SLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDP 279
+ E ++ L+++++ A +N+LG L K+ + +I L++ P
Sbjct: 514 ---------QFNEAVTSLQQAVRLKPDYAEAYNSLGSALYKAQQFDPAIEAYKKALSLKP 564
Query: 280 NNCDCIGNLGIAYFQSGDMEQSAKCFQDLI 309
+ NLG YF++ ++A F++ +
Sbjct: 565 GTAETNNNLGTVYFRTKRYPEAAGSFKEAV 594
>gi|337285534|ref|YP_004625007.1| hypothetical protein Thein_0158 [Thermodesulfatator indicus DSM
15286]
gi|335358362|gb|AEH44043.1| Tetratricopeptide repeat protein [Thermodesulfatator indicus DSM
15286]
Length = 206
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 73/170 (42%), Gaps = 21/170 (12%)
Query: 231 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 290
E+ L K ++ D V LG +L + G+L+ + L P + + + NLG+
Sbjct: 38 EDALKTFKYLLELDPPNFEVRVNLGTLLAQIGKLEEAKKHFEIALKAYPKSAEALVNLGL 97
Query: 291 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQA 350
F G+++++ + + + N P AL+N + + + +
Sbjct: 98 VNFHLGNLDEAQEYYLKALEVRPNWPPALVNLSTVYI---------------------EQ 136
Query: 351 SAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKL 400
A EC A+ +DP + + NLA AYY G + + + LEKA KL
Sbjct: 137 KKYKEAAECCEKAISSDPNFSMAYNNLAVAYYHLGKIKEAREALEKAKKL 186
>gi|357162940|ref|XP_003579571.1| PREDICTED: probable UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase SEC-like [Brachypodium
distachyon]
Length = 983
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 82/203 (40%), Gaps = 14/203 (6%)
Query: 230 LEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLG 289
LEE ++ + ++Q+ A+ + L I + +L SI S + DP + N+G
Sbjct: 279 LEEAIACYQRALQARPDYAMAYGNLATIYYEQRQLDMSIHCYSQAILCDPRFVEAHNNMG 338
Query: 290 IAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLL---------CKYGSVLAGAGAN 340
A +G +E++ CFQ ++ NHP AL N + + Y + +A
Sbjct: 339 NALKDAGRVEEAINCFQSCLILQANHPQALTNLGNIYMEWNMASAAASFYKAAIAVTSGL 398
Query: 341 TGE----GACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEK 396
T Q + A C L+ DP AA N N + G + + +
Sbjct: 399 TSPFNNLAVIYKQQGSYADAIACYTEVLRIDPTAADALVNRGNTFKEFGRVAEAIQDYMQ 458
Query: 397 AAKLEPNCMSTRYAVAVSRIKDA 419
AA + P M+ +A S KD+
Sbjct: 459 AATIMPT-MAEAHANLASAYKDS 480
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 66/162 (40%), Gaps = 13/162 (8%)
Query: 254 LGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQ 313
LG I + IS LAVDP +C GN+ A+ + GD++ + + I
Sbjct: 99 LGAIYFQLRDYDLCISKNEEALAVDPGFAECYGNMANAWKEKGDIDLAICYYLTAIKIRS 158
Query: 314 NHPAALINYA-----------ALLLCKYGSVLAG--AGANTGEGACLDQASAVNVAKECL 360
N A N A A C+ +L A++ G + V A C
Sbjct: 159 NFCDAWSNLASAYTRKGRLHDAAQCCRQALILNPRLVDAHSNLGNLMKAQGFVEEAYTCY 218
Query: 361 LAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 402
L A++ DP A W+NLA + GD + + ++A KL P
Sbjct: 219 LEAIRIDPHFAIAWSNLAGLFMEVGDLNKAMQYYKEAVKLNP 260
Score = 43.9 bits (102), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 69/189 (36%), Gaps = 18/189 (9%)
Query: 251 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 310
W+ L + GRL + L ++P D NLG G +E++ C+ + I
Sbjct: 164 WSNLASAYTRKGRLHDAAQCCRQALILNPRLVDAHSNLGNLMKAQGFVEEAYTCYLEAIR 223
Query: 311 KDQNHPAALINYAALLL---------------CKYGSVLAGAGANTGEGACLDQASAVNV 355
D + A N A L + K A A N +G +
Sbjct: 224 IDPHFAIAWSNLAGLFMEVGDLNKAMQYYKEAVKLNPSFADAHLN--QGNVYKAMGMLEE 281
Query: 356 AKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSR 415
A C AL+A P A + NLA YY S C +A +P + + +
Sbjct: 282 AIACYQRALQARPDYAMAYGNLATIYYEQRQLDMSIHCYSQAILCDPRFVEAHNNMG-NA 340
Query: 416 IKDAERSQE 424
+KDA R +E
Sbjct: 341 LKDAGRVEE 349
Score = 43.1 bits (100), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 108/268 (40%), Gaps = 46/268 (17%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELL----SLVQIHHAQ 209
P A AH G +Y+ +G +A++ Y++A + ARP+ +L I++ Q
Sbjct: 260 PSFADAHLNQGNVYKAMGMLEEAIACYQRALQ---------ARPDYAMAYGNLATIYYEQ 310
Query: 210 CLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSIS 269
+L+ + +++ D R N +G L +GR++ +I+
Sbjct: 311 ------------------RQLDMSIHCYSQAILCDPRFVEAHNNMGNALKDAGRVEEAIN 352
Query: 270 VLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLI-----LKDQNHPAALI---- 320
S L + N+ + NLG Y + +A ++ I L + A+I
Sbjct: 353 CFQSCLILQANHPQALTNLGNIYMEWNMASAAASFYKAAIAVTSGLTSPFNNLAVIYKQQ 412
Query: 321 -NYAALLLCKYGSVL----AGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWA 375
+YA + C Y VL A A G + V A + + A P A A
Sbjct: 413 GSYADAIAC-YTEVLRIDPTAADALVNRGNTFKEFGRVAEAIQDYMQAATIMPTMAEAHA 471
Query: 376 NLANAYYLTGDHRSSGKCLEKAAKLEPN 403
NLA+AY +G+ S+ +KA L P+
Sbjct: 472 NLASAYKDSGNQESAITSYKKALCLRPD 499
Score = 39.7 bits (91), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 34/174 (19%), Positives = 67/174 (38%), Gaps = 21/174 (12%)
Query: 230 LEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLG 289
+EE + E+++ D A+ W+ L + ++ G L ++ + ++P+ D N G
Sbjct: 211 VEEAYTCYLEAIRIDPHFAIAWSNLAGLFMEVGDLNKAMQYYKEAVKLNPSFADAHLNQG 270
Query: 290 IAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQ 349
Y G +E++ C+Q + Q P + Y L Y +
Sbjct: 271 NVYKAMGMLEEAIACYQRAL---QARPDYAMAYGNLATIYY------------------E 309
Query: 350 ASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 403
++++ C A+ DP+ N+ NA G + C + L+ N
Sbjct: 310 QRQLDMSIHCYSQAILCDPRFVEAHNNMGNALKDAGRVEEAINCFQSCLILQAN 363
>gi|428219241|ref|YP_007103706.1| hypothetical protein Pse7367_3029 [Pseudanabaena sp. PCC 7367]
gi|427991023|gb|AFY71278.1| Tetratricopeptide TPR_2 repeat-containing protein [Pseudanabaena
sp. PCC 7367]
Length = 1639
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 69/332 (20%), Positives = 138/332 (41%), Gaps = 48/332 (14%)
Query: 72 SSSHHDKGSILMSKEMDVAEVEGKKINKLGKCRSRISSKMDSALEFGVDADGDQSGLGTS 131
+ +H+ G++LM + A +E + A+E D D LG +
Sbjct: 84 AKAHYSLGNVLMDAKQLAAAIESYQ----------------RAIELDPDLDSAHFMLGYA 127
Query: 132 SSSREEKVSSLKTGLVHVARKM---PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEIL- 187
++ L+ + H + + P+ A++ LGL Y Q A+++ E+A ++L
Sbjct: 128 ----DQASGQLEQAIFHYQKAIDANPQRGDAYYNLGLAYGSRKQTNLAIANLEQAVQLLP 183
Query: 188 --LRCEADIARPEL----LSLVQIHHAQCLLPESSGDNSLDK----ELEPEELEEILSKL 237
L+ +A+ Q H+ Q + + + + + +L+ + +
Sbjct: 184 NDLKIRISLAKEYKKAGNFQAAQPHYEQAIAIDPDHAETQFQLGYVYHQTNQLDAAIRQY 243
Query: 238 KESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGD 297
+ ++ D + ++ LG IL + G L+++I++ L V+P N + NLG A+
Sbjct: 244 QRAIALDPNYELTYSNLGAILRRQGDLEAAIAMYEQALEVNPRNTSALYNLGNAFLAKHQ 303
Query: 298 MEQSAKCFQDLILKDQNHPAALINYAAL--LLCKYGSVLAGAGANTGEGAC--------L 347
+E + C++ ++ + P A+ + L LL K V A A C L
Sbjct: 304 IEDAIACYRQVV---EIKPDAIHAHQDLANLLFKTDIVAARTAAEDYHRGCAHIDPIATL 360
Query: 348 DQASAVNVAKECLLAALKADPKA-AHIWANLA 378
+ N+ + ALK + AH++ANL+
Sbjct: 361 ANLISTNIKSDYYDVALKYFLEVEAHVYANLS 392
>gi|307213772|gb|EFN89108.1| Tetratricopeptide repeat protein 37 [Harpegnathos saltator]
Length = 1264
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 83/190 (43%), Gaps = 20/190 (10%)
Query: 228 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 287
+ LEE ++ L+ +++S W G I S+ + + VD NN +C+ +
Sbjct: 426 KHLEEAINILELALESSE----AWLLFGQIYWDMNDYNHSLVAFLNGIKVDRNNWECMIH 481
Query: 288 LGIAYFQ-SGDMEQSAKCFQDLILKDQNHPAA----------LINYAALLLCKYGSVLAG 336
LG Y + + D+E+S +C+Q + + N A L N A + + G
Sbjct: 482 LGRYYCECANDIERSRRCYQTALQINPNSEEAGIGLSTAYRLLKNTDANIQLLQNVTMQG 541
Query: 337 AGANTGEGAC----LDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGK 392
G LD AV K L ++ADP H W +LA+AY + G H S+ K
Sbjct: 542 IGPKWAWLQLGLQHLDNGDAVEAIK-ALQHVIRADPNDNHSWESLADAYLVRGGHMSALK 600
Query: 393 CLEKAAKLEP 402
++A +L P
Sbjct: 601 SYQRALQLSP 610
>gi|410031484|ref|ZP_11281314.1| hypothetical protein MaAK2_19879 [Marinilabilia sp. AK2]
Length = 471
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 61/290 (21%), Positives = 110/290 (37%), Gaps = 49/290 (16%)
Query: 157 AHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESS 216
A H+LLG +++ + +A+ Y++ + LR + A +L ++ E
Sbjct: 135 AEVHYLLGNLFRSENKTEQAIHHYKEC--VKLRINHEDALFQL----------AMITEED 182
Query: 217 GDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLA 276
G EIL +E + D A W LG++ + GR + +I L
Sbjct: 183 GS-----------FHEILQFYQEFIDQDPYSAGAWYNLGVVYNRLGRYEEAIKAYDYALI 231
Query: 277 VDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLI-------------------LKDQNHPA 317
+D + NLG AY + + + + +Q+ I L +
Sbjct: 232 IDESFASAYFNLGNAYMNTHQFDLALEAYQNTINCEGANAENCCYLGAAYEKLDQIDMAF 291
Query: 318 ALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANL 377
+A L +Y A G G C+ + A A+K + + W L
Sbjct: 292 KYFKKSAKLDPEYDD------AWFGLGMCMLKKDKYFEAIHYFKKAIKLTGENPNYWVGL 345
Query: 378 ANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQEPTE 427
A+A Y G+ ++S + E+A LEP + T +++ D R +E +
Sbjct: 346 ADAEYHLGNLQASAEAYEEAINLEPGIIETYINLSIIYF-DQNRFEETID 394
>gi|297833104|ref|XP_002884434.1| hypothetical protein ARALYDRAFT_896453 [Arabidopsis lyrata subsp.
lyrata]
gi|297330274|gb|EFH60693.1| hypothetical protein ARALYDRAFT_896453 [Arabidopsis lyrata subsp.
lyrata]
Length = 977
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 108/264 (40%), Gaps = 38/264 (14%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 213
P A+ LG +Y+ LG+P +A+ Y+ A ++ C ++ I++ Q
Sbjct: 254 PAFPDAYLNLGNVYKALGRPTEAIMCYQHALQMRPNCAMAFG-----NIASIYYEQ---- 304
Query: 214 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 273
+L+ + K+++ D R +N LG L GR+ +I +
Sbjct: 305 --------------GQLDLAIRHYKQAISRDPRFLEAYNNLGNALKDIGRVDEAIRCYNQ 350
Query: 274 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLI-----LKDQNHPAALI-----NYA 323
LA+ PN+ + NLG Y + M ++ F+ + L + A+I NY+
Sbjct: 351 CLALQPNHPQAMANLGNIYMEWNMMGPASSLFKATLAVTTGLSAPFNNLAIIYKQQGNYS 410
Query: 324 ALLLCKYGSVLA----GAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLAN 379
+ C Y VL A A G + V A + + A+ P A ANLA+
Sbjct: 411 DAISC-YNEVLRIDPLAADALVNRGNTYKEIGRVTEAIQDYMHAINFRPTMAEAHANLAS 469
Query: 380 AYYLTGDHRSSGKCLEKAAKLEPN 403
AY +G ++ ++A L P+
Sbjct: 470 AYKDSGHVEAAITSYKQALLLRPD 493
Score = 42.7 bits (99), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 61/143 (42%), Gaps = 17/143 (11%)
Query: 275 LAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCK----- 329
L + P +C GN+ A+ + GD +++ + + I N A N A+ + K
Sbjct: 114 LRIQPQFAECYGNMANAWKEKGDTDRAIRYYLIAIELRPNFADAWSNLASAYMRKGRFSE 173
Query: 330 ----------YGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLAN 379
+L A +N G + ++ A C L A++ P A W+NLA
Sbjct: 174 ATQCCQQALSLNPLLVDAHSNLGN--LMKAQGLIHEAYSCYLEAVRIQPTFAIAWSNLAG 231
Query: 380 AYYLTGDHRSSGKCLEKAAKLEP 402
+ +GD + + ++A KL+P
Sbjct: 232 LFMESGDLNRALQYYKEAVKLKP 254
>gi|325959264|ref|YP_004290730.1| hypothetical protein Metbo_1528 [Methanobacterium sp. AL-21]
gi|325330696|gb|ADZ09758.1| Tetratricopeptide TPR_1 repeat-containing protein [Methanobacterium
sp. AL-21]
Length = 329
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 98/248 (39%), Gaps = 44/248 (17%)
Query: 155 KNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPE 214
KN A GL+Y++L Q +A+ SY+KA EI P+ +L + L
Sbjct: 41 KNETAWIYNGLIYEKLEQYPEAIESYDKALEI---------NPKN-ALTWFYKGLILT-- 88
Query: 215 SSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSL 274
E+ E + S++ D++ W G++L + G Q +I + +
Sbjct: 89 -----------NLEKFSEAIESYNTSIKYDSKIIGSWINKGVLLNELGNYQEAIECQNKV 137
Query: 275 LAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVL 334
L +DP N N G+ + G ++ +CF+++I + + +L LL
Sbjct: 138 LELDPQNETAWINKGLILEELGKYSEAIECFENVIRINPKNLDSLFKKGVLL-------- 189
Query: 335 AGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCL 394
G + A+N C L+ DPK A W N + G + K
Sbjct: 190 ---------GNLKNYQEAIN----CYNKVLERDPKNADSWNNKGATQAMLGKKDEALKSY 236
Query: 395 EKAAKLEP 402
+KA ++ P
Sbjct: 237 DKALEINP 244
Score = 45.8 bits (107), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 65/316 (20%), Positives = 121/316 (38%), Gaps = 35/316 (11%)
Query: 231 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 290
+E L K + ++ D++ W GLI K + +I L ++P N +
Sbjct: 26 QEALEKNDKFLEIDSKNETAWIYNGLIYEKLEQYPEAIESYDKALEINPKNA-------L 78
Query: 291 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQA 350
+F G + + + F + I +++ ++ KY S + G+ N +G L++
Sbjct: 79 TWFYKGLILTNLEKFSEAI---ESYNTSI---------KYDSKIIGSWIN--KGVLLNEL 124
Query: 351 SAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYA 410
A EC L+ DP+ W N G + + +C E ++ P + + +
Sbjct: 125 GNYQEAIECQNKVLELDPQNETAWINKGLILEELGKYSEAIECFENVIRINPKNLDSLFK 184
Query: 411 VAVSRIKDAERSQEPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFAAVQKTHHEVAAA 470
V + + + QE A N +L E DP + +W A Q + A
Sbjct: 185 KGV-LLGNLKNYQE-------AINCYNKVL-ERDPKNAD---SWNNKGATQAMLGKKDEA 232
Query: 471 FETEEN--ELSKMEECAGAGESAFLDQASAVNVAKECLLAALKADPKAAHIWANLANAYY 528
++ + E++ E ++ L + E +++ DP W N A
Sbjct: 233 LKSYDKALEINPKEADTWNNKALILSNQEKYQKSIELYDISIEIDPNFNDAWHNKGVALK 292
Query: 529 LTGDHRSSGKCLEKVL 544
G H + KC +KVL
Sbjct: 293 ALGKHEEALKCFDKVL 308
>gi|282163899|ref|YP_003356284.1| hypothetical protein MCP_1229 [Methanocella paludicola SANAE]
gi|282156213|dbj|BAI61301.1| hypothetical protein [Methanocella paludicola SANAE]
Length = 244
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/181 (19%), Positives = 77/181 (42%), Gaps = 23/181 (12%)
Query: 251 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 310
W GL+ + G L +++ L L +DP + + G ++ G+ +++ + ++ I
Sbjct: 72 WFLKGLLYYQRGNLMAALGYLEEALDIDPKHVEARSVAGNCHYYMGEYKEALEYYETAIK 131
Query: 311 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 370
D+ +P A N +G L N A +C L+ +P
Sbjct: 132 IDRAYPKAWYN---------------------KGVVLSDIRLYNEAIQCYEEVLRINPGV 170
Query: 371 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST--RYAVAVSRIKDAERSQEPTEQ 428
A +W N Y + + + +CL+++ ++ P ++T A A+ R+ + + E E+
Sbjct: 171 AVVWTNKGYCYAMLNQYTEALECLDRSLEINPEDVTTLNNKAAALRRLGRDDEAAEYDEK 230
Query: 429 L 429
+
Sbjct: 231 V 231
>gi|451979886|ref|ZP_21928294.1| conserved hypothetical protein [Nitrospina gracilis 3/211]
gi|451762906|emb|CCQ89508.1| conserved hypothetical protein [Nitrospina gracilis 3/211]
Length = 504
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 84/199 (42%), Gaps = 13/199 (6%)
Query: 230 LEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLG 289
L+E +++++ + R W LGL+ L+ G ++ +DP + D NLG
Sbjct: 92 LKEAAEAYQKAVRINDRLDPAWFNLGLVELEWGHHPQAVDAFRRAAEIDPTDPDYPFNLG 151
Query: 290 IAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL---------LCKYGSVL----AG 336
A GD++++ + F+ + D ++ A N +L + Y L
Sbjct: 152 NALSTLGDVKEARRQFERTVFLDPSYAHAWNNLGIMLRECGEIKEAMDAYQRALDINPQF 211
Query: 337 AGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEK 396
A A+ G + A A+KA+P+ A + NLAN YYL + + + E
Sbjct: 212 ADAHFNLGNLYEAQGNAEQALVSYQQAVKANPRFAKAYNNLANIYYLQMEMDRARETYET 271
Query: 397 AAKLEPNCMSTRYAVAVSR 415
+++P + R+ + R
Sbjct: 272 VLEIDPANHTARHMMDALR 290
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 66/302 (21%), Positives = 113/302 (37%), Gaps = 59/302 (19%)
Query: 259 LKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAA 318
L + RL+ + ++L +L +D ++ D + LG+ FQ G ++ + + D A
Sbjct: 19 LNAQRLEDARNLLQQVLELDASHFDALHILGVLAFQKGSPAEAEDFIRRALAVDDGFAEA 78
Query: 319 LINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLA 378
N G L + + A E A++ + + W NL
Sbjct: 79 HYNL---------------------GKVLRERGRLKEAAEAYQKAVRINDRLDPAWFNLG 117
Query: 379 NAYYLTGDHRSSGKCLEKAAKLEP----------NCMSTRYAVAVSRIKDAERSQEPTEQ 428
G H + +AA+++P N +ST + +K+A R E T
Sbjct: 118 LVELEWGHHPQAVDAFRRAAEIDPTDPDYPFNLGNALST-----LGDVKEARRQFERTVF 172
Query: 429 L----SWAGNEMASILREGDPVQIEPPIAWAGFAAVQKTHHEVAAAFETEENELSKMEEC 484
L + A N + +LRE ++ A Q+ ++ F L + E
Sbjct: 173 LDPSYAHAWNNLGIMLRECGEIK-------EAMDAYQRAL-DINPQFADAHFNLGNLYEA 224
Query: 485 AGAGESAFLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKVL 544
G E A + AV KA+P+ A + NLAN YYL + + + E VL
Sbjct: 225 QGNAEQALVSYQQAV-----------KANPRFAKAYNNLANIYYLQMEMDRARETYETVL 273
Query: 545 MV 546
+
Sbjct: 274 EI 275
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 73/165 (44%), Gaps = 13/165 (7%)
Query: 157 AHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCL--LPE 214
A AH+ LG + + G+ +A +Y+KA I R + L+ L HH Q +
Sbjct: 76 AEAHYNLGKVLRERGRLKEAAEAYQKAVRINDRLDPAWFNLGLVELEWGHHPQAVDAFRR 135
Query: 215 SSGDNSLDKELEPEELEEILSKL---KESMQSDTRQAVV-------WNTLGLILLKSGRL 264
++ + D + P L LS L KE+ + R + WN LG++L + G +
Sbjct: 136 AAEIDPTDPDY-PFNLGNALSTLGDVKEARRQFERTVFLDPSYAHAWNNLGIMLRECGEI 194
Query: 265 QSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLI 309
+ ++ L ++P D NLG Y G+ EQ+ +Q +
Sbjct: 195 KEAMDAYQRALDINPQFADAHFNLGNLYEAQGNAEQALVSYQQAV 239
>gi|406934936|gb|EKD69050.1| TPR Domain containing protein [uncultured bacterium]
Length = 488
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 67/315 (21%), Positives = 125/315 (39%), Gaps = 63/315 (20%)
Query: 163 LGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLD 222
LG++Y++ + KA+ Y + ++ +C E+++ + + +A+ ++ + ++D
Sbjct: 171 LGVLYEKKNELKKALECYLNSYKMDGKC------TEVINNIGLVYAKL----NNYNKAID 220
Query: 223 KELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNC 282
L+ ++E + ++A+ N LGLI +G+ SIS LL VD +
Sbjct: 221 SYLKTLDIE-----------PENKKAL--NNLGLIYGLTGKFYDSISTWKKLLNVDSGDY 267
Query: 283 DCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTG 342
NLG+AY G+ + F+ + + AL+N
Sbjct: 268 STHFNLGVAYLNVGNKTNARYYFESALKINPRSAEALMN--------------------- 306
Query: 343 EGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 402
G+ Q + + A +K DP + NL YY+ ++KA P
Sbjct: 307 SGSLYVQEARYDEAVGEFKKVIKVDPSFYKAYYNLGTIYYMRRQFLDCEAVMKKAVSYCP 366
Query: 403 NCMSTRYAVA--VSRIKDAERSQEPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFA-- 458
+ ++ Y + + D E+ G EM + E P E PIA +A
Sbjct: 367 DFVNAYYYLGKLYFELDDGEK-----------GLEMFKKIVEISP---ENPIALTDYAIM 412
Query: 459 -AVQKTHHEVAAAFE 472
++QK H E F+
Sbjct: 413 LSLQKRHEEAVKLFK 427
Score = 38.5 bits (88), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 61/153 (39%), Gaps = 21/153 (13%)
Query: 250 VWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLI 309
+ N LG++ K+ + +I + ++ + P D NLGIAY S K F D
Sbjct: 99 ILNNLGVLHAKTNNFEDAIKCWNEVIKIKPFELDAYYNLGIAY--------SEKGFVD-- 148
Query: 310 LKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPK 369
AA+ Y+ ++ GS A G ++ + + A EC L + K D K
Sbjct: 149 -------AAIFMYSRVVKTGKGS----AQLYNNLGVLYEKKNELKKALECYLNSYKMDGK 197
Query: 370 AAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 402
+ N+ Y ++ + K +EP
Sbjct: 198 CTEVINNIGLVYAKLNNYNKAIDSYLKTLDIEP 230
>gi|193216265|ref|YP_001997464.1| tetratricopeptide domain-containing protein [Chloroherpeton
thalassium ATCC 35110]
gi|193089742|gb|ACF15017.1| Tetratricopeptide TPR_2 repeat protein [Chloroherpeton thalassium
ATCC 35110]
Length = 365
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 82/195 (42%), Gaps = 45/195 (23%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEI----------LLRC--------EADIA 195
P A++ LGL Y+RL Q KAV++ KA +I L C +A +A
Sbjct: 178 PNFIDAYYNLGLSYKRLEQYDKAVAALNKAVQIGANDPAIFFSLGECYQGAGDNNQAIVA 237
Query: 196 R----------PELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDT 245
PE+L + + H EE ++ + +++ +
Sbjct: 238 FQNAFKLNSNDPEILYQIGVSHVNL-----------------EEYDQAIRAFGSALRMNK 280
Query: 246 RQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCF 305
A + LG+I K+ + Q+++ ++ + P N NLG+AY +GD E + + +
Sbjct: 281 DFAECYYNLGIIYTKTHKYQNALYAYEQVVRIQPENRTAYYNLGVAYINAGDTESARRTY 340
Query: 306 QDLILKDQNHPAALI 320
+ L+ D N +L+
Sbjct: 341 KSLLKLDINLAESLL 355
>gi|118364085|ref|XP_001015265.1| TPR Domain containing protein [Tetrahymena thermophila]
gi|89297032|gb|EAR95020.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
Length = 1052
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/268 (19%), Positives = 110/268 (41%), Gaps = 44/268 (16%)
Query: 146 LVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQI 205
L V + P +AH+ LGL+Y++ +A++ +KA ++ + + L+ L I
Sbjct: 331 LQKVIKIKPDYIYAHYNLGLIYEQKQMMNEAINCQKKAVDLNPK-----HKDSLIRLAVI 385
Query: 206 HHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQ 265
H + + ++ + ++ +Q + V N LG++ +S +L
Sbjct: 386 H------------------TQLKMFDQAIEYYQKVIQLNPNNTDVQNNLGILFEQSNKLD 427
Query: 266 SSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAAL 325
+I+ + ++PN+ NLGI Y + ++++ CF+ + + +P+ L
Sbjct: 428 EAINCYMKNIKINPNDSKTYFNLGIVYEKKKSIDEAMVCFKKAL---EINPSFL------ 478
Query: 326 LLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTG 385
A G V+ A C +++ DP + + + +L YY T
Sbjct: 479 ------------QAQISLGNAYSSKKMVDEAILCFKKSIQLDPNSFNAYNSLGLIYYDTQ 526
Query: 386 DHRSSGKCLEKAAKLEPNCMSTRYAVAV 413
+ +C +KA + PN + + +
Sbjct: 527 MMDQAFECFQKALDINPNYFFAHFNLGL 554
Score = 43.1 bits (100), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 70/167 (41%), Gaps = 23/167 (13%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 213
P ++ +F LG++Y++ +A+ ++KA EI P L AQ L
Sbjct: 441 PNDSKTYFNLGIVYEKKKSIDEAMVCFKKALEI---------NPSFL------QAQISLG 485
Query: 214 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 273
+ + ++E + K+S+Q D +N+LGLI + + +
Sbjct: 486 NAYSSKKM--------VDEAILCFKKSIQLDPNSFNAYNSLGLIYYDTQMMDQAFECFQK 537
Query: 274 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALI 320
L ++PN NLG+ Y E++ K +Q I + N AL+
Sbjct: 538 ALDINPNYFFAHFNLGLVYENRNQQEEALKHYQQAIQSNPNQANALL 584
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 111/279 (39%), Gaps = 41/279 (14%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 213
P AHF LGL+Y+ Q +A+ Y++A + + P + A LL
Sbjct: 543 PNYFFAHFNLGLVYENRNQQEEALKHYQQAIQ---------SNP--------NQANALLK 585
Query: 214 ESS---GDNSLDKELE--PEELEEILSK----LKESMQSDTRQAVVWNTLGLILLKSGRL 264
S + + DK L+ +++I K LK++++ D + LGLI ++
Sbjct: 586 ASDLYIQNKNFDKALQCYLYYIQKIKDKAILSLKQAVKLDPNYYQAYEQLGLIQQENKMF 645
Query: 265 QSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQ----DLILKDQN-HPAAL 319
+ SI ++ ++P + +L Y Q M A + D+ K +N H
Sbjct: 646 EESILYFKKVIEINPMFLNAYDSLACVY-QEMKMSNEALIYYQKALDINPKLENTHFKLG 704
Query: 320 INYAA------LLLCKYGSVLAG---AGANTGEGACLDQASAVNVAKECLLAALKADPKA 370
I Y +LC ++ A A G +Q + ++ A +C AL+ D
Sbjct: 705 ILYQEKKMLDEAILCYQKAIEINPKNANAYNNLGIIFEQKNMIDQAFDCYTKALEIDQSY 764
Query: 371 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRY 409
N+ YY + +C + + +L+PN + Y
Sbjct: 765 VKAHNNIGLLYYDLKQMDKAHQCFKLSIELDPNYEDSHY 803
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 34/167 (20%), Positives = 68/167 (40%), Gaps = 13/167 (7%)
Query: 255 GLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQN 314
G+I +L +I L ++ + P+ NLG+ Y Q M ++ C + + +
Sbjct: 315 GIIYFAQKKLDEAILELQKVIKIKPDYIYAHYNLGLIYEQKQMMNEAINCQKKAVDLNPK 374
Query: 315 HPAALINYAAL---------LLCKYGSVLAGAGANT----GEGACLDQASAVNVAKECLL 361
H +LI A + + Y V+ NT G +Q++ ++ A C +
Sbjct: 375 HKDSLIRLAVIHTQLKMFDQAIEYYQKVIQLNPNNTDVQNNLGILFEQSNKLDEAINCYM 434
Query: 362 AALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTR 408
+K +P + + NL Y + C +KA ++ P+ + +
Sbjct: 435 KNIKINPNDSKTYFNLGIVYEKKKSIDEAMVCFKKALEINPSFLQAQ 481
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 62/300 (20%), Positives = 117/300 (39%), Gaps = 49/300 (16%)
Query: 140 SSLKTGLVHVARKM---------------PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAE 184
+ K G+++ +KM PKNA+A+ LG+++++ +A Y KA
Sbjct: 699 THFKLGILYQEKKMLDEAILCYQKAIEINPKNANAYNNLGIIFEQKNMIDQAFDCYTKAL 758
Query: 185 EI---LLRCEADIARPELLSLVQIHHA-QCL-----LPESSGDNSLDKELEPE---ELEE 232
EI ++ +I L Q+ A QC L + D+ ++ L E + E
Sbjct: 759 EIDQSYVKAHNNIGLL-YYDLKQMDKAHQCFKLSIELDPNYEDSHYNQGLVYEFQGHITE 817
Query: 233 ILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAY 292
+ K ++Q + + ++ L I + +IS L+ ++P N D + +GI Y
Sbjct: 818 AMESYKRAIQINPKYTKAYSRLACIYSDLEMMIEAISCYLQLIELEPENIDAMNYVGIIY 877
Query: 293 FQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASA 352
Q + + FQ +L + H +L N G + LD+A +
Sbjct: 878 SQRNQPNTAIQLFQRALLINPEHINSLYN---------------LGNTYEDKEQLDEAIS 922
Query: 353 VNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVA 412
++ DP+ + N Y + + +KA ++ N + T Y +A
Sbjct: 923 Y------YQRIIQIDPQNVKAINKIGNIYIKKQMDQEALTQYKKALSIDKNFVQTYYNIA 976
>gi|425460197|ref|ZP_18839679.1| Similar to tr|Q96301|Q96301 [Microcystis aeruginosa PCC 9808]
gi|389827192|emb|CCI21792.1| Similar to tr|Q96301|Q96301 [Microcystis aeruginosa PCC 9808]
Length = 1271
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 62/303 (20%), Positives = 116/303 (38%), Gaps = 46/303 (15%)
Query: 138 KVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARP 197
++ S K + + P A ++ LG + + GQ +A+S Y++A + ++P
Sbjct: 1013 ELESAKNFYLQAIKVDPTYAKSYHNLGFLAAQQGQLQEAISYYQQAIQ---------SQP 1063
Query: 198 ELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLI 257
+ P + + L E + EE E+ ++ S+Q D+ V+ +L +
Sbjct: 1064 DY-------------PTAFYNLGLVYE-QLEETEKAIACYSHSVQLDSTNVEVYKSLAQL 1109
Query: 258 LLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPA 317
+ + L + P+N + NLG+ ++ +++ CFQ +I Q P
Sbjct: 1110 YDRQENYAKAEKYYRCALLLQPDNLELRYNLGVVLYEQKKFDKAVSCFQKII---QAKPQ 1166
Query: 318 ALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANL 377
I Y L G Q + AK C A++ DP A + NL
Sbjct: 1167 DAIAYLHL------------------GISYKQQKLLTKAKSCFEKAIELDPDYAMAYYNL 1208
Query: 378 ANAYYLTGDHRSSGKCLEKAAKLEP--NCMSTRYAVAVSRIKDAERSQEPTEQLSWAGNE 435
Y D + + C +A + +P T A+S IK+ + W N+
Sbjct: 1209 GVVYSCQPDEKKAVDCFRQALRCDPANKLAHTALLFALSGIKEVSSEEIYDASSRWYRNK 1268
Query: 436 MAS 438
+ +
Sbjct: 1269 IQT 1271
Score = 39.7 bits (91), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 34/166 (20%), Positives = 62/166 (37%), Gaps = 21/166 (12%)
Query: 248 AVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQD 307
A ++ LG +G L+S+ + + VDP NLG Q G ++++ +Q
Sbjct: 998 AAYYHQLGREKTLTGELESAKNFYLQAIKVDPTYAKSYHNLGFLAAQQGQLQEAISYYQQ 1057
Query: 308 LILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKAD 367
I ++P A N G +Q A C +++ D
Sbjct: 1058 AIQSQPDYPTAFYNL---------------------GLVYEQLEETEKAIACYSHSVQLD 1096
Query: 368 PKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAV 413
++ +LA Y ++ + K A L+P+ + RY + V
Sbjct: 1097 STNVEVYKSLAQLYDRQENYAKAEKYYRCALLLQPDNLELRYNLGV 1142
>gi|198282345|ref|YP_002218666.1| hypothetical protein Lferr_0200 [Acidithiobacillus ferrooxidans
ATCC 53993]
gi|198246866|gb|ACH82459.1| TPR repeat-containing protein [Acidithiobacillus ferrooxidans ATCC
53993]
Length = 505
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 53/105 (50%), Gaps = 3/105 (2%)
Query: 220 SLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDP 279
+L+K+ E E IL ++++ A LG +L K GRL + ++L L + P
Sbjct: 401 TLNKQGRWNEAETIL---RQAVAIKPEHADALINLGAVLSKQGRLDEAETILRQALTIMP 457
Query: 280 NNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAA 324
+ D + NLG+ Q G E++ FQ + + NHP AL+N A
Sbjct: 458 DQADALVNLGVILRQRGCPEEAKTAFQQALTANPNHPEALVNLGA 502
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 110/269 (40%), Gaps = 51/269 (18%)
Query: 138 KVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAE-EILLRCEADI-- 194
+ S + ++ V MP NA + F+LG + +V +E EI R I
Sbjct: 202 RYSEAEHAIMKVLSLMPDNAESIFILGAI---------SVGKKRLSEGEIAFRKALSIKP 252
Query: 195 ARPE-LLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNT 253
A PE L++L I Q + E+ G ++P+ LE ++
Sbjct: 253 AYPEALMNLGAILSDQGRVDEAIGTFRKALTIKPDYLEALMR------------------ 294
Query: 254 LGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQ 313
LG+ L + R+ + +VL LA+ P+ + + NLG+ G E++ + +
Sbjct: 295 LGVALGRQDRMDEAETVLRKALAIKPDYPEALMNLGVTLGHEGRWEETETLLRQALTIKP 354
Query: 314 NHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHI 373
++P AL+N A L + +G CLD+A N+ + L A++ D A +
Sbjct: 355 DYPEALMNLGAAL--------------SRQGRCLDEAE--NILRRTL--AIQPDHPDALV 396
Query: 374 WANLANAYYLTGDHRSSGKCLEKAAKLEP 402
NL G + L +A ++P
Sbjct: 397 --NLGATLNKQGRWNEAETILRQAVAIKP 423
Score = 42.0 bits (97), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 26/116 (22%), Positives = 49/116 (42%), Gaps = 21/116 (18%)
Query: 288 LGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL 347
L Y Q+G ++++ + +++++++ NH A N+ G
Sbjct: 23 LATHYHQTGRLKEAEQLYRNILVEQPNH---------------------AEVNSNMGVLA 61
Query: 348 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 403
Q +N A AAL +DPK WAN Y TG + + L+++ ++ N
Sbjct: 62 SQTGRINDALYFFQAALGSDPKNGQTWANYMLLLYNTGRTQEASSALQQSLAIDKN 117
>gi|386002705|ref|YP_005921004.1| Tetratricopeptide TPR_2 [Methanosaeta harundinacea 6Ac]
gi|357210761|gb|AET65381.1| Tetratricopeptide TPR_2 [Methanosaeta harundinacea 6Ac]
Length = 660
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 86/339 (25%), Positives = 115/339 (33%), Gaps = 57/339 (16%)
Query: 231 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 290
EE L++L ++ +D WN GLIL GR + ++ + L DP N G+
Sbjct: 253 EEALARLDGAVGADPGDKAAWNDRGLILGVLGRYEEAVESFDAALRADPGYLLAWNNRGL 312
Query: 291 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLC---------KYGSVL----AGA 337
A G E++ + + I D + A N L Y S L A A
Sbjct: 313 ALANLGRSEEALESYNRSIDIDPSFALAWYNRGRALFDLERYDEAVEAYDSALEVEPAFA 372
Query: 338 GANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDH---------- 387
A GA L A E AL+ DP W N + YL G +
Sbjct: 373 LAWNNRGAALAALGREEEALESYDRALEIDPGYEIAWYNRGSVLYLEGRYFDAIKAFDEA 432
Query: 388 ---------------------RSSGK---CLEKAAKLEPNCMSTRYAVAVSRIKDAERSQ 423
R G+ C EKA +L+P T + V+ + D R+
Sbjct: 433 IRFNPTSADAWHSKGHALYQMRRPGEALVCYEKALELDPGRAETWHHRGVA-LADLNRAA 491
Query: 424 EPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFAAVQKTHHEVAAAFETEENELSKMEE 483
E E A E DP + EPP G A E A A T EL
Sbjct: 492 EAAEAFDRA--------LELDP-EYEPPWYRKGILAYSSGRPEEALAHFTRAAELDPGHA 542
Query: 484 CAGAGESAFLDQASAVNVAKECLLAALKADPKAAHIWAN 522
A L + A E + AL+AD A W N
Sbjct: 543 EAWNNRGWILFTLGDTDEALESIDRALEADTALAEGWNN 581
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 87/382 (22%), Positives = 131/382 (34%), Gaps = 82/382 (21%)
Query: 219 NSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVD 278
N D+E+ E E L D VVW LG L GR+ ++ + L +D
Sbjct: 112 NLTDREMAVEAFERALG-------IDPEDGVVWYELGNALSFLGRVDEALQAYNRSLTID 164
Query: 279 PNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALIN----------------- 321
P N N G+ G E++A F+ I D + AA N
Sbjct: 165 PENGKAWNNRGLILGALGRYEEAASSFERAISSDPDLAAAWQNRGNALRALGRPEEALEC 224
Query: 322 YAALLLCKYGSV----------------------LAGA-GANTGEGACL-DQASAVNV-- 355
YA+ L G V L GA GA+ G+ A D+ + V
Sbjct: 225 YASALAIDSGLVGSWKGAAELLRALGRDEEALARLDGAVGADPGDKAAWNDRGLILGVLG 284
Query: 356 ----AKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAV 411
A E AAL+ADP W N A G + + ++ ++P+ Y
Sbjct: 285 RYEEAVESFDAALRADPGYLLAWNNRGLALANLGRSEEALESYNRSIDIDPSFALAWYNR 344
Query: 412 AVSRIKDAERSQEPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFAAVQKTHHEVAAAF 471
+ + D ER E E +++EP FA AA
Sbjct: 345 GRA-LFDLERYDEAVEAYD-------------SALEVEP-----AFALAWNNRGAALAAL 385
Query: 472 ETEENELSKME---ECAGAGESAFLDQASAVNV------AKECLLAALKADPKAAHIWAN 522
EE L + E E A+ ++ S + + A + A++ +P +A W +
Sbjct: 386 GREEEALESYDRALEIDPGYEIAWYNRGSVLYLEGRYFDAIKAFDEAIRFNPTSADAWHS 445
Query: 523 LANAYYLTGDHRSSGKCLEKVL 544
+A Y + C EK L
Sbjct: 446 KGHALYQMRRPGEALVCYEKAL 467
Score = 41.6 bits (96), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 54/252 (21%), Positives = 89/252 (35%), Gaps = 44/252 (17%)
Query: 151 RKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQC 210
R P +A A G ++ +P +A+ YEKA E+ D R E HH
Sbjct: 434 RFNPTSADAWHSKGHALYQMRRPGEALVCYEKALEL------DPGRAE-----TWHHRGV 482
Query: 211 LLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISV 270
L + L++ E E +++ D W G++ SGR + +++
Sbjct: 483 ALAD------LNRAAEAAE------AFDRALELDPEYEPPWYRKGILAYSSGRPEEALAH 530
Query: 271 LSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKY 330
+ +DP + + N G F GD +++ + + D N
Sbjct: 531 FTRAAELDPGHAEAWNNRGWILFTLGDTDEALESIDRALEADTALAEGWNN--------R 582
Query: 331 GSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSS 390
G VL G N A E + DP W N + Y G +R +
Sbjct: 583 GVVLTALGKN-------------EEALEAYNRTIDIDPAHPRAWNNKGASLYHLGRYREA 629
Query: 391 GKCLEKAAKLEP 402
C +A +L+P
Sbjct: 630 ADCYGRALELDP 641
>gi|94264810|ref|ZP_01288587.1| TPR repeat [delta proteobacterium MLMS-1]
gi|93454749|gb|EAT05007.1| TPR repeat [delta proteobacterium MLMS-1]
Length = 217
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 51/110 (46%), Gaps = 1/110 (0%)
Query: 221 LDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPN 280
+ +EL PE+ ++ L+ ++++D W LG + + +I L ++P+
Sbjct: 69 MSRELTPEQ-SRVMESLERAVEADPDNVQAWTQLGHLYFDTDHYSQAIKAYQRSLQLEPD 127
Query: 281 NCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKY 330
N D I +LG+ Y + G +++ F+ I H A N +LL +
Sbjct: 128 NPDVITDLGVMYRRDGQPQKAIDAFEQAIAISPGHETARFNLGVVLLHDF 177
>gi|340623750|ref|YP_004742203.1| hypothetical protein GYY_02905 [Methanococcus maripaludis X1]
gi|339904018|gb|AEK19460.1| hypothetical protein GYY_02905 [Methanococcus maripaludis X1]
Length = 409
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 62/330 (18%), Positives = 121/330 (36%), Gaps = 47/330 (14%)
Query: 225 LEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDC 284
L EE ++ L + ++ D W G+ L G S+ D
Sbjct: 103 LSQEEYDKALYYYNKLLEIDNSVGKTWFYKGICLKMLGNYDESVEAFDKSTG-DYETLVL 161
Query: 285 IGN-LGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGE 343
I N LG Y+Q+G+ +++ +CF + D N +L G+
Sbjct: 162 IWNDLGYCYYQNGEYDKATECFDKALTLDGNLKYSL---------------------NGK 200
Query: 344 GACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKL--- 400
G C ++ +A EC A+ D N + Y + + + C EKA L
Sbjct: 201 GLCYEKKEQYTMAIECFDKAVCQDECYYDAIYNKGISCYKSKKYSCAISCFEKALDLNNS 260
Query: 401 EPNCMSTRYAVAVSRIKDAERSQEPTEQLSWAGNEMASILREGDPVQIEP--PIAWAGFA 458
P C + A ++ + + E+ ++L ++++ P+ W+G
Sbjct: 261 NPYCYFYK-ANSLKSLGEYEK----------------AVLNYKKAIELDSKNPVFWSGLG 303
Query: 459 AVQKTHHEVAAAFETEEN--ELSKMEECAGAGESAFLDQASAVNVAKECLLAALKADPKA 516
+E ++ ++ E EL+ ++ + + + N + C AL +
Sbjct: 304 LSYNYLNEYNSSIQSYEKAVELNPKDDISWSNLGYLHYKTKKYNESIFCFEKALDLNSNN 363
Query: 517 AHIWANLANAYYLTGDHRSSGKCLEKVLMV 546
+ W L N+Y L ++ + C EK + +
Sbjct: 364 KYAWNGLGNSYLLLKNYEKALMCYEKAIEI 393
>gi|118354513|ref|XP_001010518.1| TPR Domain containing protein [Tetrahymena thermophila]
gi|89292285|gb|EAR90273.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
Length = 1619
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 124/300 (41%), Gaps = 43/300 (14%)
Query: 114 ALEFGVDADGDQSGLGTSSSSR---EEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRL 170
LE + DG LG + + + +E + S + L PKN + LG+ Y
Sbjct: 1282 CLEINLKNDGCYENLGIAYNEKGLQDEAIQSYQKCL----EINPKNDICYNNLGIAYYEK 1337
Query: 171 GQPLKAVSSYEKAEEILLRCEA-----DIARPE--LLSLVQIHHAQCLLPESSGD---NS 220
G +A+ SY+K EI + E I E L + +CL + D N+
Sbjct: 1338 GLQDEAIQSYQKCLEINPKNEGCYNNLGIVYNEKGLQDEAIQSYEKCLEINPTKDSCYNN 1397
Query: 221 LDKELEPEE-LEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDP 279
L + + L+E ++ ++ ++ + + LG+ + G L +I L ++P
Sbjct: 1398 LGNTYKAKGLLDEAINSYQKCLEINPKNDGCHENLGIAYNEKGLLDEAIKSYQKCLEINP 1457
Query: 280 NNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGA 339
N C NLGIAY++ G ++++ + +Q + + +P + Y L
Sbjct: 1458 KNDVCYKNLGIAYYEIGLLDEAIQSYQKCL---EINPKNDVCYNNL-------------- 1500
Query: 340 NTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDH----RSSGKCLE 395
G ++ + A + L+ +PK + NL NAYY G H +S KCLE
Sbjct: 1501 ----GIAYNEKGLQDEAIQSYQKYLEMNPKNDVCYNNLGNAYYEKGLHDEAIQSYQKCLE 1556
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 69/310 (22%), Positives = 112/310 (36%), Gaps = 53/310 (17%)
Query: 114 ALEFGVDADGDQSGLGTSSSSREEKVSSLKTGLVHVARKM----PKNAHAHFLLGLMYQR 169
LE D + LG S K+ L + RK PKN H LG+ Y
Sbjct: 432 CLEINPKNDDCYNNLGNSY-----KIKGLLDKAIKSYRKCLKINPKNDICHENLGIAYNE 486
Query: 170 LGQPLKAVSSYEKAEEILLRCEADIARPE----LLSLVQIHHAQCLLPESSGDNSLDKEL 225
+A+ SY+K EI P +L + A+ LL E+
Sbjct: 487 KDLQDEAIQSYQKCLEI---------NPNKDSCYYNLGNAYKAEGLLDEA---------- 527
Query: 226 EPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCI 285
+ ++ ++ + + +N LG+ + G L +I L ++P N C
Sbjct: 528 --------IQSYQKCLKINPKNNFCYNNLGIAYNEKGLLDEAIQSYQKCLEINPQNYVCY 579
Query: 286 GNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCK---------YGSVLAG 336
NLGIAY Q G +++ + +Q I + N + N L K Y L
Sbjct: 580 NNLGIAYNQKGLQDEAIQSYQKFIKINPNKDSCYQNLGNAYLAKGLQDEAIQSYQQCLEI 639
Query: 337 AGANTG----EGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGK 392
N G G ++ + A + L+ +P + NL NAY G + +
Sbjct: 640 NPQNYGCYENLGIAYNEKGLQDEAIQSYQKYLEINPNKDSCYQNLGNAYKAKGLLNEAIQ 699
Query: 393 CLEKAAKLEP 402
++ K+ P
Sbjct: 700 SYQQCLKINP 709
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 105/264 (39%), Gaps = 44/264 (16%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 213
PKN + LG++Y G +A+ SYEK EI +L + A+ LL
Sbjct: 1355 PKNEGCYNNLGIVYNEKGLQDEAIQSYEKCLEI-----NPTKDSCYNNLGNTYKAKGLLD 1409
Query: 214 ESSGDNSLDK--ELEPEE----------------LEEILSKLKESMQSDTRQAVVWNTLG 255
E+ NS K E+ P+ L+E + ++ ++ + + V + LG
Sbjct: 1410 EAI--NSYQKCLEINPKNDGCHENLGIAYNEKGLLDEAIKSYQKCLEINPKNDVCYKNLG 1467
Query: 256 LILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNH 315
+ + G L +I L ++P N C NLGIAY + G +++ + +Q + + +
Sbjct: 1468 IAYYEIGLLDEAIQSYQKCLEINPKNDVCYNNLGIAYNEKGLQDEAIQSYQKYL---EMN 1524
Query: 316 PAALINYAALLLCKYGSVLAGAG---------ANTGEGACLDQASAVNVAKECLLAALKA 366
P + Y L Y L N CL+ AK L AA+K+
Sbjct: 1525 PKNDVCYNNLGNAYYEKGLHDEAIQSYQKCLEINPKNDGCLENLGVAYKAKGLLDAAIKS 1584
Query: 367 DPKAAHI-------WANLANAYYL 383
K I + NL AY++
Sbjct: 1585 YQKCLEINPDKDSCYYNLGKAYWM 1608
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 104/270 (38%), Gaps = 52/270 (19%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 213
PKN H LG+ Y A+ SY+K EI P + S
Sbjct: 777 PKNDCCHENLGITYNEKDLHDDAIQSYQKCLEI---------NPNIDSFYY--------- 818
Query: 214 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 273
+ G+ K L L+E + ++ ++++ + +N LG+ + G +I
Sbjct: 819 -NLGNAYKAKGL----LDEAIKSYQKCLETNPKNNFCYNNLGIAYNEKGLHDEAIQSYQK 873
Query: 274 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSV 333
L ++PNN C NLGIAY Q G +++ + +Q + + +P + Y L G+
Sbjct: 874 CLEINPNNDVCYNNLGIAYNQKGLQDEAIQSYQKYL---EINPKDDVCYNNL-----GNA 925
Query: 334 LAGAG-----------------ANTG----EGACLDQASAVNVAKECLLAALKADPKAAH 372
G G N G G ++ + A + L L+ +P
Sbjct: 926 YKGKGLHDEAIQSYQKCLEINPKNDGCHENLGIAYNEKGLQDEAIQYYLQCLEINPNKDS 985
Query: 373 IWANLANAYYLTGDHRSSGKCLEKAAKLEP 402
+ NL NAY G + + K ++ ++ P
Sbjct: 986 CYQNLGNAYKAKGLYDEAIKSYQQCLEINP 1015
Score = 43.1 bits (100), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 107/271 (39%), Gaps = 32/271 (11%)
Query: 155 KNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIH-------- 206
KN + LG+ Y LG +A+ SY+K EI E D+ L + +
Sbjct: 1220 KNGGCYGNLGIAYNELGLQDEAIQSYQKYLEI--NPENDVCYNNLGNAYKTKGLLDEAIK 1277
Query: 207 -HAQCLLPESSGDNSLDK----ELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKS 261
+ +CL D + E +E + ++ ++ + + + +N LG+ +
Sbjct: 1278 SYQKCLEINLKNDGCYENLGIAYNEKGLQDEAIQSYQKCLEINPKNDICYNNLGIAYYEK 1337
Query: 262 GRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSA----KCFQDLILKDQNHPA 317
G +I L ++P N C NLGI Y + G +++ KC + KD +
Sbjct: 1338 GLQDEAIQSYQKCLEINPKNEGCYNNLGIVYNEKGLQDEAIQSYEKCLEINPTKDSCYNN 1397
Query: 318 ALINYAA--LL---LCKYGSVL----AGAGANTGEGACLDQASAVNVAKECLLAALKADP 368
Y A LL + Y L G + G ++ ++ A + L+ +P
Sbjct: 1398 LGNTYKAKGLLDEAINSYQKCLEINPKNDGCHENLGIAYNEKGLLDEAIKSYQKCLEINP 1457
Query: 369 KAAHIWANLANAYYLTG--DH--RSSGKCLE 395
K + NL AYY G D +S KCLE
Sbjct: 1458 KNDVCYKNLGIAYYEIGLLDEAIQSYQKCLE 1488
Score = 42.4 bits (98), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 106/261 (40%), Gaps = 32/261 (12%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLR---CEADIARPE----LLSLVQIH 206
P+N + LG+ Y G +A+ SY+K EI C ++ LL+
Sbjct: 641 PQNYGCYENLGIAYNEKGLQDEAIQSYQKYLEINPNKDSCYQNLGNAYKAKGLLNEAIQS 700
Query: 207 HAQCLL--PESSG--DNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSG 262
+ QCL P++ G +N + E L+E + ++ ++ + +N LG G
Sbjct: 701 YQQCLKINPKNDGCHENLGIAQYEKGLLDEAIQSYQKCLKISPKNDSCYNNLGNAYKAKG 760
Query: 263 RLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINY 322
L +I L ++P N C NLGI Y + + + + +Q + + N + N
Sbjct: 761 YLDEAIQSYQLCLEINPKNDCCHENLGITYNEKDLHDDAIQSYQKCLEINPNIDSFYYNL 820
Query: 323 AALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYY 382
G+ G LD+A + ++CL + +PK + NL AY
Sbjct: 821 --------GNAYKAKGL-------LDEA--IKSYQKCL----ETNPKNNFCYNNLGIAYN 859
Query: 383 LTGDHRSSGKCLEKAAKLEPN 403
G H + + +K ++ PN
Sbjct: 860 EKGLHDEAIQSYQKCLEINPN 880
Score = 38.5 bits (88), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 55/261 (21%), Positives = 104/261 (39%), Gaps = 32/261 (12%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLR---CEADIA----RPELLSLVQIH 206
PKN H LG+ Y G +A+ SY+K EI + C ++ + L
Sbjct: 369 PKNDACHENLGITYNEKGLQDEAIQSYQKCLEINSKNGGCYGNLGIAYNQKGLQDEAIQS 428
Query: 207 HAQCLLPESSGDNSLDKELEPEELEEILSK----LKESMQSDTRQAVVWNTLGLILLKSG 262
+ +CL D+ + +++ +L K ++ ++ + + + LG+ +
Sbjct: 429 YQKCLEINPKNDDCYNNLGNSYKIKGLLDKAIKSYRKCLKINPKNDICHENLGIAYNEKD 488
Query: 263 RLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINY 322
+I L ++PN C NLG AY G ++++ + +Q + + +P Y
Sbjct: 489 LQDEAIQSYQKCLEINPNKDSCYYNLGNAYKAEGLLDEAIQSYQKCL---KINPKNNFCY 545
Query: 323 AALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYY 382
L G E LD+ A+ ++C L+ +P+ + NL AY
Sbjct: 546 NNL------------GIAYNEKGLLDE--AIQSYQKC----LEINPQNYVCYNNLGIAYN 587
Query: 383 LTGDHRSSGKCLEKAAKLEPN 403
G + + +K K+ PN
Sbjct: 588 QKGLQDEAIQSYQKFIKINPN 608
Score = 38.5 bits (88), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 123/313 (39%), Gaps = 35/313 (11%)
Query: 114 ALEFGVDADGDQSGLGTSSSSR---EEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRL 170
LE + D LG + ++ +E + S + L P+N + LG+ Y
Sbjct: 976 CLEINPNKDSCYQNLGNAYKAKGLYDEAIKSYQQCL----EINPQNYGCYENLGIAYNEK 1031
Query: 171 GQPLKAVSSYEKAEEILLR---CEADIARPELLSLVQIH----HAQCLL--PESSG-DNS 220
G +A+ SY+K EI C ++ Q + +CL P++ G N+
Sbjct: 1032 GLQDEAIQSYQKCLEINPNKDSCYNNLGNAYYEKGFQDEAIQSYQKCLEINPKNEGCYNN 1091
Query: 221 LDKELEPEELE-EILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDP 279
L + L+ E + ++ ++ + + +N LG G +I L ++P
Sbjct: 1092 LGIAYNEKGLQDEAIQSYQKYLEINPKNDACYNNLGNAYQAKGLQDEAIKQYQKCLEINP 1151
Query: 280 NNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALIN----YAA--LLLCKYGSV 333
N C NLG AY Q G +++ + +Q + + N + N Y A LL S
Sbjct: 1152 KNEGCYENLGNAYNQKGLQDEAIQSYQKCLEMNPNKDSCYYNLGNAYKAKGLLDEAIKSY 1211
Query: 334 LAGAGANTGEGAC-------LDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTG- 385
N+ G C ++ + A + L+ +P+ + NL NAY G
Sbjct: 1212 QKCLEINSKNGGCYGNLGIAYNELGLQDEAIQSYQKYLEINPENDVCYNNLGNAYKTKGL 1271
Query: 386 -DH--RSSGKCLE 395
D +S KCLE
Sbjct: 1272 LDEAIKSYQKCLE 1284
>gi|338530109|ref|YP_004663443.1| hypothetical protein LILAB_02190 [Myxococcus fulvus HW-1]
gi|337256205|gb|AEI62365.1| TPR repeat-containing protein [Myxococcus fulvus HW-1]
Length = 639
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 127/314 (40%), Gaps = 38/314 (12%)
Query: 128 LGTSSSSREEKVSSLKTGLVHVAR--KMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEE 185
L T+ ++ + + +T V AR P +A A + LG + L P KAV+ +K
Sbjct: 11 LLTAQAAEPDTATLERTAAVESARLEDSPDDADALYRLGTAFLALNTPKKAVAPLKK--- 67
Query: 186 ILLRCEADIARPELLSLVQ--------------IHHAQCLLPESSGDNSLDKELEPEELE 231
L+ E D+ P+L +L + + A PE S + ++ L L+
Sbjct: 68 -LVAQEPDLIPPKL-ALARALRLSGEPEQAREVLDTAIAAFPEESTLRA-ERGLLARVLD 124
Query: 232 E---ILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
E +S+ +++ + A + LG L ++ R +I L +D NL
Sbjct: 125 ERDVAISQYAVAVELSPQDAELRFNLGEALQRASRTDDAIEAYREALKLDGKLNVARVNL 184
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLL---------CKYGSVLAG--- 336
G A + G ++ + ++ + A N LL+ +Y LA
Sbjct: 185 GKALAEKGLNGEAKETLREATRQKLGDTEAHYNLGVLLMRENDLDGAIAEYQRTLAADPK 244
Query: 337 -AGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLE 395
A A+ G L++ A + L A+ ADPK A NL AYY GD+ + K E
Sbjct: 245 HASAHNNMGVALNEKGDPRKATQAFLKAIAADPKFAEAHFNLGLAYYQLGDNVRALKAFE 304
Query: 396 KAAKLEPNCMSTRY 409
KA LEP S Y
Sbjct: 305 KAVVLEPRRSSGPY 318
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 7/86 (8%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
ELE +++K + Q D R LG I L+ G + VL+S+L+VDP + + +
Sbjct: 509 ELEAVVAK--DPAQLDARA-----ELGFIYLRGGDGAKARKVLTSVLSVDPRHTLGLLYM 561
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQN 314
G +Q G+ + + K F+D + D N
Sbjct: 562 GHTLYQQGNTKGAEKSFRDAVQVDPN 587
Score = 42.7 bits (99), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 3/89 (3%)
Query: 232 EILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIA 291
E L K K+ ++DT LG++ + GR ++S L +++A DP D LG
Sbjct: 474 EGLLKPKDGEEADT---AALARLGIVHSRRGRPDLAVSELEAVVAKDPAQLDARAELGFI 530
Query: 292 YFQSGDMEQSAKCFQDLILKDQNHPAALI 320
Y + GD ++ K ++ D H L+
Sbjct: 531 YLRGGDGAKARKVLTSVLSVDPRHTLGLL 559
>gi|17229291|ref|NP_485839.1| hypothetical protein alr1799 [Nostoc sp. PCC 7120]
gi|17130889|dbj|BAB73498.1| alr1799 [Nostoc sp. PCC 7120]
Length = 402
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 79/167 (47%), Gaps = 21/167 (12%)
Query: 231 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 290
E ++ ++++ D R+ + LGL+L + G LQ +I+ + ++P+ + NL I
Sbjct: 168 EGAITAYRQALVIDPRRVEAYYNLGLVLYEQGLLQEAIAAYQDAVNLEPSKINAHHNLAI 227
Query: 291 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQA 350
A Q+G ME++ +++++ D + AA Y++L GS++A G A Q
Sbjct: 228 ALQQTGKMEEAIVAYREVLKLDPKNAAA---YSSL-----GSLMAMQGRPEEAIAAYTQ- 278
Query: 351 SAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKA 397
A++ DPK A + NL Y G+ + + ++A
Sbjct: 279 ------------AVRQDPKNALAYYNLGITLYNQGELQKASNAFKRA 313
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/153 (21%), Positives = 72/153 (47%), Gaps = 23/153 (15%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 213
P+ A++ LGL+ G +A+++Y+ A + P S + HH +
Sbjct: 182 PRRVEAYYNLGLVLYEQGLLQEAIAAYQDAVNL---------EP---SKINAHHNLAIAL 229
Query: 214 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 273
+ +G ++EE + +E ++ D + A +++LG ++ GR + +I+ +
Sbjct: 230 QQTG-----------KMEEAIVAYREVLKLDPKNAAAYSSLGSLMAMQGRPEEAIAAYTQ 278
Query: 274 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQ 306
+ DP N NLGI + G++++++ F+
Sbjct: 279 AVRQDPKNALAYYNLGITLYNQGELQKASNAFK 311
>gi|337288211|ref|YP_004627683.1| hypothetical protein TOPB45_0653 [Thermodesulfobacterium sp. OPB45]
gi|334901949|gb|AEH22755.1| Tetratricopeptide TPR_2 repeat-containing protein
[Thermodesulfobacterium geofontis OPF15]
Length = 202
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 69/147 (46%), Gaps = 21/147 (14%)
Query: 254 LGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQ 313
LG++L + G L+ + + L PN+ + NLG+ F+ G+++++ KC++ + ++
Sbjct: 61 LGILLAQEGELEEAKKAFTFTLKYYPNSVEAWNNLGLIEFELGNLDEAEKCYRKALEINE 120
Query: 314 NHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHI 373
+ IN + +L+ K G + SA+ AK P+ A I
Sbjct: 121 TFAESWINLSTILIEK--------------GLFKEAISALEKAKTF-------APENAVI 159
Query: 374 WANLANAYYLTGDHRSSGKCLEKAAKL 400
+ NLA AYY D S+ K L A ++
Sbjct: 160 YNNLAVAYYYLKDKESALKNLNLAKEM 186
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 79/192 (41%), Gaps = 23/192 (11%)
Query: 231 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 290
EE L L++ + + L + G+ Q + +L +DP + + + NLGI
Sbjct: 4 EEALKALEKEAMENPHSVFAQHKLAIAYFNLGKFQEAKEAFKRVLKLDPFHFEAMINLGI 63
Query: 291 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQA 350
Q G++E++ K F + + +P ++ + L L ++ E LD+
Sbjct: 64 LLAQEGELEEAKKAFTFTL---KYYPNSVEAWNNLGLIEF------------ELGNLDE- 107
Query: 351 SAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN--CMSTR 408
A++C AL+ + A W NL+ G + + LEKA P +
Sbjct: 108 -----AEKCYRKALEINETFAESWINLSTILIEKGLFKEAISALEKAKTFAPENAVIYNN 162
Query: 409 YAVAVSRIKDAE 420
AVA +KD E
Sbjct: 163 LAVAYYYLKDKE 174
>gi|432330743|ref|YP_007248886.1| TPR repeat-containing protein [Methanoregula formicicum SMSP]
gi|432137452|gb|AGB02379.1| TPR repeat-containing protein [Methanoregula formicicum SMSP]
Length = 318
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 68/186 (36%), Gaps = 21/186 (11%)
Query: 231 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 290
+E L ++++D A W G L K GR + I +A+DP+N D N G
Sbjct: 31 KEALEAFTRALEADPSFAPAWVGRGFALGKQGRYEEEIECCEKAIALDPHNVDAWNNRGF 90
Query: 291 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQA 350
A E+ C + + D + A N G L G + GE +C D+A
Sbjct: 91 ACGMLARFEEKIHCCEQTLALDPENATAWNN--------KGVALGMLGRHEGEVSCCDRA 142
Query: 351 SAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYA 410
AV P+ W N A + C ++A K+ P +S
Sbjct: 143 LAVR-------------PRYLSAWVNKGFALGKLKRYEEEIACYDRALKIYPFFLSALVN 189
Query: 411 VAVSRI 416
V+ I
Sbjct: 190 KGVAHI 195
Score = 45.8 bits (107), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 81/205 (39%), Gaps = 13/205 (6%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
EE + ++++ D A WN G+ L GR + +S LAV P N
Sbjct: 97 RFEEKIHCCEQTLALDPENATAWNNKGVALGMLGRHEGEVSCCDRALAVRPRYLSAWVNK 156
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALIN--YAALLLCKYGSVL-----------A 335
G A + E+ C+ + +AL+N A + L +Y + A
Sbjct: 157 GFALGKLKRYEEEIACYDRALKIYPFFLSALVNKGVAHIHLKEYRDAIETLDRALSIDPA 216
Query: 336 GAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLE 395
A A +G L + A L AL+ DP A W L+N+ +LTG S + +
Sbjct: 217 HAKALYRKGLTLSLMGRHSEAIPVLEKALEIDPAIADAWVVLSNSCFLTGRLEESARAFD 276
Query: 396 KAAKLEPNCMSTRYAVAVSRIKDAE 420
A ++ + T +S +K+ +
Sbjct: 277 MAYYIDVKDVRTGLVKGMSLLKNGK 301
>gi|218438344|ref|YP_002376673.1| hypothetical protein PCC7424_1361 [Cyanothece sp. PCC 7424]
gi|218171072|gb|ACK69805.1| TPR repeat-containing protein [Cyanothece sp. PCC 7424]
Length = 1276
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 84/210 (40%), Gaps = 14/210 (6%)
Query: 231 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 290
+E L ++++ ++ +A WN G+ LL G+ + ++S L ++PN + + N G
Sbjct: 69 QEALQSFNKALELNSNEANAWNYRGVALLHLGKYEEALSTFDKALELNPNYAEALSNRGF 128
Query: 291 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL--LCKYGSVLA-----------GA 337
+ +++ F + + N+ AL N L L +Y A
Sbjct: 129 VLGKLERYQEALPTFDKALELNPNYAEALFNRGVALERLERYQEAFQSYDKALELNPNNA 188
Query: 338 GANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKA 397
A G L + A AL+ +P A +W N A ++ + + EKA
Sbjct: 189 VAWNYRGVALGKLERYQEALPTFDKALELNPNNAEVWFNRGVALVNLERYQEALQSYEKA 248
Query: 398 AKLEPNCMSTRYAVAVSRIKDAERSQEPTE 427
KL PN V+ ++ ER QE E
Sbjct: 249 LKLNPNYGEAWNYRGVA-LESLERYQEALE 277
Score = 47.0 bits (110), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 96/413 (23%), Positives = 143/413 (34%), Gaps = 75/413 (18%)
Query: 77 DKGSILMSKEMDVAEVEGKKINKLGKCRSRISSKMDSALEFGVDADGDQSGLGTSSSSRE 136
+K L S E + G + LGK +S+ D ALE + S G E
Sbjct: 76 NKALELNSNEANAWNYRGVALLHLGKYEEALST-FDKALELNPNYAEALSNRGFVLGKLE 134
Query: 137 EKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIAR 196
+L T P A A F G+ +RL + +A SY+KA E L A
Sbjct: 135 RYQEALPT-FDKALELNPNYAEALFNRGVALERLERYQEAFQSYDKALE-LNPNNAVAWN 192
Query: 197 PELLSLVQIHHAQCLLPESSGDNSLDK--ELEP----------------EELEEILSKLK 238
++L ++ Q LP + DK EL P E +E L +
Sbjct: 193 YRGVALGKLERYQEALP------TFDKALELNPNNAEVWFNRGVALVNLERYQEALQSYE 246
Query: 239 ESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAY------ 292
++++ + WN G+ L R Q ++ ++PNN + N G+A
Sbjct: 247 KALKLNPNYGEAWNYRGVALESLERYQEALEAFDKARELNPNNAESWNNRGVALEKLERY 306
Query: 293 ---FQS----------------------GDMEQSAKCFQ--DLILKDQNHPAALINYAAL 325
FQS G +E+ + FQ D +K + A NY L
Sbjct: 307 QEAFQSYDQAIQLNLNDAQAWYNRGFPLGKLERYEEAFQSFDQAIKLNPNYAEAWNYRGL 366
Query: 326 LLC---KYGSVLAG-----------AGANTGEGACLDQASAVNVAKECLLAALKADPKAA 371
L +Y A A +G L A + A+K +P A
Sbjct: 367 ALGNLERYEEAFQSYDQAIKLNPNYAEAWYNQGVALGMLERYEEAFQFYDQAIKLNPNHA 426
Query: 372 HIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQE 424
W N A + + + +KA KL PN Y V+ + ER QE
Sbjct: 427 QAWNNRGVALGNLERYEEAFQSFDKAIKLNPNHAEAWYNQGVA-LGKLERYQE 478
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 81/213 (38%), Gaps = 20/213 (9%)
Query: 228 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 287
E EE ++++ + A W G+ L R + + + ++PN+ N
Sbjct: 372 ERYEEAFQSYDQAIKLNPNYAEAWYNQGVALGMLERYEEAFQFYDQAIKLNPNHAQAWNN 431
Query: 288 LGIAYFQSGDMEQSAKCFQDL---ILKDQNHPAALINYAALL--LCKYGSVLAG------ 336
G+A G++E+ + FQ I + NH A N L L +Y L
Sbjct: 432 RGVAL---GNLERYEEAFQSFDKAIKLNPNHAEAWYNQGVALGKLERYQEALQSYDQAIK 488
Query: 337 -----AGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSG 391
A A +G L + A + A+K +P A W N A ++ +
Sbjct: 489 LNPNYAEAWYNQGVALGKLERYQEALQSYDQAIKLNPNYAEAWYNRGFALGNLECYQEAF 548
Query: 392 KCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQE 424
+ +KA +L PN S +++ ER QE
Sbjct: 549 QSFDKAIQLNPNDAEAWNNRGFS-LRNLERYQE 580
Score = 43.1 bits (100), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 48/226 (21%), Positives = 87/226 (38%), Gaps = 30/226 (13%)
Query: 228 EELEEILSKLKESMQSDTRQAVV----------------WNTLGLILLKSGRLQSSISVL 271
EE+E +L++ ++ + QA + WN G++L G+ Q ++
Sbjct: 16 EEIEALLNQGRDHFNAQNYQAALDALEQVLTLEPNKVEAWNGQGVVLFNLGKHQEALQSF 75
Query: 272 SSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL--LCK 329
+ L ++ N + G+A G E++ F + + N+ AL N +L L +
Sbjct: 76 NKALELNSNEANAWNYRGVALLHLGKYEEALSTFDKALELNPNYAEALSNRGFVLGKLER 135
Query: 330 YGSVLAG-----------AGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLA 378
Y L A A G L++ A + AL+ +P A W
Sbjct: 136 YQEALPTFDKALELNPNYAEALFNRGVALERLERYQEAFQSYDKALELNPNNAVAWNYRG 195
Query: 379 NAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQE 424
A ++ + +KA +L PN + V+ + + ER QE
Sbjct: 196 VALGKLERYQEALPTFDKALELNPNNAEVWFNRGVALV-NLERYQE 240
Score = 42.7 bits (99), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 71/195 (36%), Gaps = 13/195 (6%)
Query: 228 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 287
E EE ++++ + A WN GL L R + + + ++PN + N
Sbjct: 338 ERYEEAFQSFDQAIKLNPNYAEAWNYRGLALGNLERYEEAFQSYDQAIKLNPNYAEAWYN 397
Query: 288 LGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL--LCKYGSVLAG--------- 336
G+A E++ + + I + NH A N L L +Y
Sbjct: 398 QGVALGMLERYEEAFQFYDQAIKLNPNHAQAWNNRGVALGNLERYEEAFQSFDKAIKLNP 457
Query: 337 --AGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCL 394
A A +G L + A + A+K +P A W N A ++ + +
Sbjct: 458 NHAEAWYNQGVALGKLERYQEALQSYDQAIKLNPNYAEAWYNQGVALGKLERYQEALQSY 517
Query: 395 EKAAKLEPNCMSTRY 409
++A KL PN Y
Sbjct: 518 DQAIKLNPNYAEAWY 532
>gi|197120103|ref|YP_002140530.1| hypothetical protein [Geobacter bemidjiensis Bem]
gi|197089463|gb|ACH40734.1| TPR domain protein [Geobacter bemidjiensis Bem]
Length = 589
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 74/178 (41%), Gaps = 21/178 (11%)
Query: 231 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 290
EE ++L++ +Q D A W L +++ + G + +L L +P N + LG+
Sbjct: 26 EEARTQLQQLVQEDPGCARGWYLLAVLVGEQGFPDQAAKLLRQALRAEPENVKALNALGV 85
Query: 291 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQA 350
A Q G+ +Q A C+ + + D A +N A LL K G LA A A +G L
Sbjct: 86 ALQQMGERDQGAACYGEALRIDSRFQEARVNLA--LLLKEGMRLAEAEALLSQGIAL--- 140
Query: 351 SAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTR 408
+P++ + N AN + G + + +L+P + R
Sbjct: 141 ----------------EPESVRLRYNYANVLHYQGRSLEATGAYREVLRLDPQHLDAR 182
>gi|300867796|ref|ZP_07112439.1| Tetratricopeptide repeat domain protein [Oscillatoria sp. PCC 6506]
gi|300334213|emb|CBN57611.1| Tetratricopeptide repeat domain protein [Oscillatoria sp. PCC 6506]
Length = 1016
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 50/93 (53%)
Query: 237 LKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSG 296
L +S++ D+ QA+ + +LGL+ K G ++ +A++PN D NLG +F+ G
Sbjct: 311 LFKSLEIDSSQAIQYYSLGLVFEKLGDFTQAVLAYQEAIALNPNYVDAYNNLGNIFFKVG 370
Query: 297 DMEQSAKCFQDLILKDQNHPAALINYAALLLCK 329
+ Q+ ++ I + H + +N A +LL +
Sbjct: 371 RLSQAESTYRQAIAVNPEHYGSYLNLANILLAQ 403
Score = 42.4 bits (98), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 54/119 (45%), Gaps = 8/119 (6%)
Query: 236 KLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQS 295
K K++++ + Q VW+ L ++ + R Q + +L L +D + +LG+ + +
Sbjct: 276 KFKQALRWNRNQVEVWHHLAIVYYMTERYQDARDILFKSLEIDSSQAIQYYSLGLVFEKL 335
Query: 296 GDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVN 354
GD Q+ +Q+ I + N+ A N G++ G + + QA AVN
Sbjct: 336 GDFTQAVLAYQEAIALNPNYVDAYNN--------LGNIFFKVGRLSQAESTYRQAIAVN 386
>gi|302338865|ref|YP_003804071.1| hypothetical protein Spirs_2362 [Spirochaeta smaragdinae DSM 11293]
gi|301636050|gb|ADK81477.1| Tetratricopeptide TPR_2 repeat protein [Spirochaeta smaragdinae DSM
11293]
Length = 647
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 78/177 (44%), Gaps = 23/177 (12%)
Query: 240 SMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDME 299
++QSD V +NTLG + K + ++I ++P N D + LG A +++G +
Sbjct: 255 AIQSDPNLWVPYNTLGKVYSKQRQWNNAIDSYKQAARLNPENADLLFELGKAQYRAGKYD 314
Query: 300 QSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKEC 359
+ + F+ I D H A +N + + G+V A A G+ A +++ S V
Sbjct: 315 DARQSFEAAIHIDPQHEKAYLNL-GVTQRRLGNVNAAINA-FGKAAQINKESDV------ 366
Query: 360 LLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP--NCMSTRYAVAVS 414
+ L Y GD + + + +KAA L+P N YAVA++
Sbjct: 367 -------------AFYQLGELYKQKGDMKQASENYQKAAALQPDRNIYQGSYAVALT 410
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 57/286 (19%), Positives = 120/286 (41%), Gaps = 45/286 (15%)
Query: 147 VHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIH 206
+H+ P++ A+ LG+ +RLG A++++ KA +I E+D+A L +++
Sbjct: 324 IHID---PQHEKAYLNLGVTQRRLGNVNAAINAFGKAAQI--NKESDVA---FYQLGELY 375
Query: 207 HAQCLLPESSGDNSLDKELEPE----------------ELEEILSKLKESMQSDTRQAVV 250
+ + ++S + L+P+ + +E + K ++ +D+ V
Sbjct: 376 KQKGDMKQASENYQKAAALQPDRNIYQGSYAVALTALGKYQEAEAAYKRAIAADSEDPVA 435
Query: 251 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 310
+ L+ L+ G+ + + + +D ++ + LG+ G+ + + ++ I
Sbjct: 436 RYNIALVQLQLGKDNDAFENAAKAVQLDSSSAVYLYTLGLTSEAVGNSDGAVSAYRASIA 495
Query: 311 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 370
KD+ + IN G D + A + LLAA DPK+
Sbjct: 496 KDRGYLPPKINL---------------------GKLYDDQGKYDEALDQLLAAYAIDPKS 534
Query: 371 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRI 416
+ NL N Y ++ S K + A + +PN RY ++++ I
Sbjct: 535 LEVNNNLGNVYLHKELYQDSIKHYKAAIEKKPNATLMRYNLSLAYI 580
Score = 39.7 bits (91), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 43/99 (43%)
Query: 231 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 290
+E L +L + D + V N LG + L Q SI + + PN NL +
Sbjct: 518 DEALDQLLAAYAIDPKSLEVNNNLGNVYLHKELYQDSIKHYKAAIEKKPNATLMRYNLSL 577
Query: 291 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCK 329
AY ++GD + + Q+LI D ++ A LL K
Sbjct: 578 AYIETGDQDDAIASLQELIKVDPSYWDAYYQLGKLLFAK 616
>gi|291571512|dbj|BAI93784.1| TPR domain protein [Arthrospira platensis NIES-39]
Length = 491
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 83/196 (42%), Gaps = 25/196 (12%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
+L E + + ++ D A N LGL L G+L +I LA+D NN NL
Sbjct: 77 KLPEAIEAYRRALALDPNNAWAHNNLGLALADQGKLPEAIEAYRRALALDSNNAYAHNNL 136
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLD 348
G+A G + ++ + ++ + D N+ A N Y L G
Sbjct: 137 GVALRNQGKLPEAIEAYRRALALDPNNAYAHNN------LGYALYLQG-----------K 179
Query: 349 QASAVNVAKECL-LAALKADPKAAHIWA--NLANAYYLTGDHRSSGKCLEKAAKLEPNCM 405
A++ + L L + P +AH A NL A GD + +KA +L+PN
Sbjct: 180 LPEAIDAYRTALALPDRRGTPASAHTLAHNNLGLALQQQGDLPGAIAEYKKAIRLDPN-- 237
Query: 406 STRYAVAVSRIKDAER 421
+A+A S +++AER
Sbjct: 238 ---FAIAYSNLQEAER 250
>gi|225430656|ref|XP_002270163.1| PREDICTED: probable UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase SEC [Vitis vinifera]
gi|296085167|emb|CBI28662.3| unnamed protein product [Vitis vinifera]
Length = 986
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 76/175 (43%), Gaps = 21/175 (12%)
Query: 228 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 287
+ + +++ +E++Q D R A + + + G + +I + + PN CD N
Sbjct: 110 HDFDMCIARNEEALQIDPRFAECYGNMANAWKEKGNVDLAIRYYLIAIELRPNFCDAWSN 169
Query: 288 LGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL 347
L AY + G + ++A+C + A IN +L A +N G +
Sbjct: 170 LASAYMRKGRLNEAAQCCRQ---------ALAIN----------PLLVDAHSNLGN--FM 208
Query: 348 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 402
+ A C + AL+ P A W+NLA + +GD + + ++A KL+P
Sbjct: 209 KAQGLIQEAYSCYIEALRIQPSFAIAWSNLAGLFMESGDLTRALQYYKEAVKLKP 263
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 106/270 (39%), Gaps = 50/270 (18%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 213
P A A+ LG +Y+ LG P +A+ Y++A + RPE
Sbjct: 263 PTFADAYLNLGNVYKALGMPQEAIVCYQRALQ---------TRPEY-------------- 299
Query: 214 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 273
+ N E +++ + K++++ D+ +N LG L GR+ +I
Sbjct: 300 AMAYGNMAGTYYEQGQMDMAIVHYKQAIECDSGFLEAYNNLGNALKDVGRIDEAIQCYHQ 359
Query: 274 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKC--------------FQDL--ILKDQNHPA 317
LA+ PN+ + NLG Y + + +A F +L I K Q
Sbjct: 360 CLALQPNHPQALTNLGNIYMEWNMVAAAATYYKATLAVTTGLSAPFSNLAIIYKQQG--- 416
Query: 318 ALINYAALLLCKYGSVLA----GAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHI 373
NYA + C Y VL A G + V+ A + + A+ P A
Sbjct: 417 ---NYADAISC-YNEVLRIDPLAADGLVNRGNTFKEIGRVSEAIQDYIHAITIRPTMAEA 472
Query: 374 WANLANAYYLTGDHRSSGKCLEKAAKLEPN 403
ANLA+AY +G ++ K ++A L P+
Sbjct: 473 HANLASAYKDSGHVEAAVKSYKQALVLRPD 502
>gi|427707117|ref|YP_007049494.1| hypothetical protein Nos7107_1704 [Nostoc sp. PCC 7107]
gi|427359622|gb|AFY42344.1| Tetratricopeptide TPR_1 repeat-containing protein [Nostoc sp. PCC
7107]
Length = 552
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 94/238 (39%), Gaps = 44/238 (18%)
Query: 226 EPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCI 285
E +L E ++ ++S+Q D + A+ +N +G +L+ G+L +I+ + DP
Sbjct: 142 EQGKLNESIAAYQKSIQLDPKNALPYNGMGNVLIYQGKLDEAIASYRKAIQFDPKYAVTY 201
Query: 286 GNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGA 345
NLG+A + ++++ ++ I D KY S G E
Sbjct: 202 HNLGLALYNQKKLDEALAAYKKAIQID---------------PKYTSAYVSLGLALSEQG 246
Query: 346 CLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKL----- 400
LD+A A L A P H A H + G L++ KL
Sbjct: 247 KLDEAMAKYRQALSLPEDKSATPTTVHTLA-----------HNNLGFALQRQGKLKEAIE 295
Query: 401 ---EPNCMSTRYAVAVSRIKDAER----SQEPTEQLSWAGNEMASILREGDPVQIEPP 451
+ + + + A + +K+AER + P E+ +ASILR + IE P
Sbjct: 296 EYKQAISIDSNFVTAQTNLKEAERLLALQRNPQEE------SLASILRSVVRINIEIP 347
>gi|253702411|ref|YP_003023600.1| hypothetical protein GM21_3825 [Geobacter sp. M21]
gi|251777261|gb|ACT19842.1| Tetratricopeptide TPR_2 repeat protein [Geobacter sp. M21]
Length = 589
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 72/178 (40%), Gaps = 21/178 (11%)
Query: 231 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 290
EE ++L++ +Q D A W L +++ + G + +L L +P N + LG+
Sbjct: 26 EEARTQLQQLVQEDPGCARGWYLLAVLVGEQGHPDQAAKLLRQALRAEPENVKALNALGV 85
Query: 291 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQA 350
A Q G+ +Q+A C+ + + D A +N A L K G LA A A G L
Sbjct: 86 ALQQMGERDQAAACYGEALRIDPRFQEARVNLA--LFLKVGMRLAEAEALLSRGIAL--- 140
Query: 351 SAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTR 408
+P + + N AN + G + + +L+P + R
Sbjct: 141 ----------------EPASVRLRYNYANVLHYQGRSLEAAGAYREVLRLDPQHLDAR 182
>gi|108761475|ref|YP_630180.1| hypothetical protein MXAN_1942 [Myxococcus xanthus DK 1622]
gi|108465355|gb|ABF90540.1| MJ0042 family finger-like domain/tetratricopeptide repeat protein
[Myxococcus xanthus DK 1622]
Length = 1628
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 91/208 (43%), Gaps = 13/208 (6%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
+LEE +++L+++ D R + TLG +LL+ G L + S L L+ +P+N + + L
Sbjct: 1357 QLEEAVAELEKAKAEDPRSTTIPITLGAVLLERGDLPGAESNLGLALSNEPSNHEALYYL 1416
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL-----------LCKYGSVLAGA 337
+ + + Q+ + + + N P Y +L + L G+
Sbjct: 1417 ALVKARRLEFTQALDNMRKAVERAPNRPDYHYAYGVILRDAKNLPDAMSAWRKTVELDGS 1476
Query: 338 GANTGE--GACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLE 395
A+ E G L + + A A+LKADP+ + ++ +AY+ + K +
Sbjct: 1477 HADAHEALGHALLEGGQFDEAIASFEASLKADPRRTRVLGSIGDAYFAAARWNDAIKRYQ 1536
Query: 396 KAAKLEPNCMSTRYAVAVSRIKDAERSQ 423
A K +P Y VA + + A+ ++
Sbjct: 1537 SALKADPKLTYVYYKVARAFTEQAQHAK 1564
>gi|326498109|dbj|BAJ94917.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 986
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 72/171 (42%), Gaps = 25/171 (14%)
Query: 234 LSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYF 293
++K +E++ D + A + + + G + +I + + + PN CD NL AY
Sbjct: 116 IAKNEEALAIDPQFAECYGNMANAWKEKGDIDLAIRYYLTAIQLRPNFCDAWSNLASAYT 175
Query: 294 QSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAG--AGANTGEGACLDQAS 351
+ G + ++A+C CK VL A++ G +
Sbjct: 176 RKGRLNEAAQC-----------------------CKQALVLNPRLVDAHSNLGNLMKAQG 212
Query: 352 AVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 402
V A C L A++ DP A W+NLA + GD + + ++A KL+P
Sbjct: 213 LVQEAYTCYLEAIRIDPHFAIAWSNLAGLFMEVGDLNKAMQYYKEAVKLKP 263
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 108/268 (40%), Gaps = 46/268 (17%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELL----SLVQIHHAQ 209
P A AH G +Y+ +G +AV+ Y++A + ARP+ +L I++ Q
Sbjct: 263 PSFADAHLNQGNVYKAMGMLQEAVACYQRALQ---------ARPDYAMAYGNLATIYYEQ 313
Query: 210 CLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSIS 269
+L+ + +++ D+R +N +G L +GR++ +I+
Sbjct: 314 ------------------RQLDMAIHCYNQAIICDSRFVEAYNNMGNALKDAGRVEEAIN 355
Query: 270 VLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALIN-------- 321
S L + N+ + NLG Y + + +A ++ I + L N
Sbjct: 356 CFQSCLVLQANHPQALTNLGNIYMEWNMISTAASFYKAAIAVTSGLSSPLNNLAVIYKQQ 415
Query: 322 --YAALLLCKYGSVL----AGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWA 375
YA + C Y VL A A G + V A + + A+ P A A
Sbjct: 416 GSYADAIAC-YTEVLRIDPTAADALVNRGNTFKEFGRVAEAIQDYIQAVTIRPNMAEAHA 474
Query: 376 NLANAYYLTGDHRSSGKCLEKAAKLEPN 403
NLA+AY +G ++ ++A L P+
Sbjct: 475 NLASAYKDSGHQEAAIASYKQALCLRPD 502
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 81/203 (39%), Gaps = 14/203 (6%)
Query: 230 LEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLG 289
L+E ++ + ++Q+ A+ + L I + +L +I + + D + N+G
Sbjct: 282 LQEAVACYQRALQARPDYAMAYGNLATIYYEQRQLDMAIHCYNQAIICDSRFVEAYNNMG 341
Query: 290 IAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAAL-----LLCKYGSVLAGAGANTGE- 343
A +G +E++ CFQ ++ NHP AL N + ++ S A A T
Sbjct: 342 NALKDAGRVEEAINCFQSCLVLQANHPQALTNLGNIYMEWNMISTAASFYKAAIAVTSGL 401
Query: 344 -------GACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEK 396
Q + A C L+ DP AA N N + G + + +
Sbjct: 402 SSPLNNLAVIYKQQGSYADAIACYTEVLRIDPTAADALVNRGNTFKEFGRVAEAIQDYIQ 461
Query: 397 AAKLEPNCMSTRYAVAVSRIKDA 419
A + PN M+ +A S KD+
Sbjct: 462 AVTIRPN-MAEAHANLASAYKDS 483
Score = 39.3 bits (90), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 110/280 (39%), Gaps = 53/280 (18%)
Query: 260 KSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAAL 319
KSG+ ++ +++ +P D + LG YFQ D + I K++ A
Sbjct: 74 KSGKYSQALEHGNAVYEKNPRRTDNLLLLGAIYFQLRDYDLC-------IAKNEEALAID 126
Query: 320 INYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLAN 379
+A YG+ +A A G+ +++A L A++ P W+NLA+
Sbjct: 127 PQFAEC----YGN-MANAWKEKGD---------IDLAIRYYLTAIQLRPNFCDAWSNLAS 172
Query: 380 AYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQEPTEQLSWAGNEMAS- 438
AY G + +C ++A L P R+ DA + GN M +
Sbjct: 173 AYTRKGRLNEAAQCCKQALVLNP------------RLVDAHSN---------LGNLMKAQ 211
Query: 439 -ILREG-----DPVQIEP--PIAWAGFAAVQKTHHEVAAAFETEENELSKMEECAGA--G 488
+++E + ++I+P IAW+ A + ++ A + + + A A
Sbjct: 212 GLVQEAYTCYLEAIRIDPHFAIAWSNLAGLFMEVGDLNKAMQYYKEAVKLKPSFADAHLN 271
Query: 489 ESAFLDQASAVNVAKECLLAALKADPKAAHIWANLANAYY 528
+ + A C AL+A P A + NLA YY
Sbjct: 272 QGNVYKAMGMLQEAVACYQRALQARPDYAMAYGNLATIYY 311
>gi|108761603|ref|YP_629581.1| hypothetical protein MXAN_1324 [Myxococcus xanthus DK 1622]
gi|108465483|gb|ABF90668.1| tetratricopeptide repeat protein [Myxococcus xanthus DK 1622]
Length = 639
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 124/311 (39%), Gaps = 36/311 (11%)
Query: 130 TSSSSREEKVSSLKTGLVHVAR--KMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEIL 187
T+ ++ + + +T V AR + P +A A + LG + L P KAV+ +K L
Sbjct: 13 TAQAAEPDSATLERTAAVESARLAESPDDADALYRLGTAFLALNTPKKAVAPLKK----L 68
Query: 188 LRCEADIARPEL-----LSL--------VQIHHAQCLLPESSGDNSLDKELEPEELEE-- 232
+ E D+ P+L L L + A PE S + ++ L L+E
Sbjct: 69 VAQEPDLIPPKLALARALRLSGEPEQARTVLDTAIAAFPEESTLRA-ERGLLARVLDERD 127
Query: 233 -ILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIA 291
+S+ +++ + A + LG L ++ R +I L +D NLG A
Sbjct: 128 VAISQYAVAVELAPQDAELRFNLGEALQRANRTDDAIEAYREALKLDAKLNVARVNLGKA 187
Query: 292 YFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLL---------CKYGSVLAGA----G 338
+ G ++ + ++ + A N LL+ +Y LA A
Sbjct: 188 LAEKGLNGEAKETLREATRQKLGDTEAHYNLGVLLMRENDLDGAIAEYQRTLAAAPKHAS 247
Query: 339 ANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAA 398
A+ G ++ A + L A+ ADPK A NL AYY GD + K E+A
Sbjct: 248 AHNNMGVAFNEKGDPRKATDAFLKAIAADPKFAEAHFNLGLAYYQLGDFARATKAFERAV 307
Query: 399 KLEPNCMSTRY 409
LEP S Y
Sbjct: 308 VLEPQRSSGPY 318
Score = 42.4 bits (98), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 42/81 (51%)
Query: 234 LSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYF 293
+S+L+ + D Q LG I L+ G + VL+S+L+VDP + + +G +
Sbjct: 507 VSELEAVVAKDPAQLEARAELGFIYLRGGDGAKARKVLTSVLSVDPRHSLGLLYMGHTLY 566
Query: 294 QSGDMEQSAKCFQDLILKDQN 314
Q G+ + + K F++ + D N
Sbjct: 567 QQGNTKGAEKSFRNAVQADPN 587
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 42/89 (47%), Gaps = 3/89 (3%)
Query: 232 EILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIA 291
E L K K+ ++DT LG++ + GR ++S L +++A DP + LG
Sbjct: 474 EGLLKPKDGEEADT---AALARLGIVHSRRGRPDLAVSELEAVVAKDPAQLEARAELGFI 530
Query: 292 YFQSGDMEQSAKCFQDLILKDQNHPAALI 320
Y + GD ++ K ++ D H L+
Sbjct: 531 YLRGGDGAKARKVLTSVLSVDPRHSLGLL 559
>gi|418697816|ref|ZP_13258802.1| tetratricopeptide repeat protein [Leptospira kirschneri str. H1]
gi|421105548|ref|ZP_15566129.1| tetratricopeptide repeat protein [Leptospira kirschneri str. H2]
gi|409954425|gb|EKO13380.1| tetratricopeptide repeat protein [Leptospira kirschneri str. H1]
gi|410009452|gb|EKO63107.1| tetratricopeptide repeat protein [Leptospira kirschneri str. H2]
Length = 368
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 42/78 (53%)
Query: 232 EILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIA 291
E + K +++SD ++ + +LG + SG +S+I S L +DP+ D NLGI+
Sbjct: 185 EAIHLFKNAIKSDPEYSLSYLSLGYLYDSSGNFKSAIRYYKSALKIDPDYPDVWNNLGIS 244
Query: 292 YFQSGDMEQSAKCFQDLI 309
Y+ G ME S F+ I
Sbjct: 245 YYNDGQMENSISHFEKAI 262
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 1/94 (1%)
Query: 238 KESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGD 297
K +++ D VWN LG+ G++++SIS + ++P + NLG Y Q D
Sbjct: 225 KSALKIDPDYPDVWNNLGISYYNDGQMENSISHFEKAIQLNPTFAYPVNNLGFIYIQKDD 284
Query: 298 MEQSAKCFQDLILKDQNHPAAL-INYAALLLCKY 330
+ K F I P L +A L +C Y
Sbjct: 285 FSDAKKYFLRSIELKPLEPFLLGETFAGLSICNY 318
>gi|449130269|ref|ZP_21766490.1| hypothetical protein HMPREF9724_01155 [Treponema denticola SP37]
gi|448943108|gb|EMB24001.1| hypothetical protein HMPREF9724_01155 [Treponema denticola SP37]
Length = 992
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 66/163 (40%), Gaps = 21/163 (12%)
Query: 250 VWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLI 309
+ N +G+I + SI +L A+D N + NLG Y Q+GD + + +CF D++
Sbjct: 79 ILNNMGVIYRRLNMFNESIVILEKAKAIDSKNETTLYNLGNTYKQNGDYKHAIQCFTDVL 138
Query: 310 LKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPK 369
P + Y L GSV C D + A+ K LK DP
Sbjct: 139 ---DIKPDDALAYNHL-----GSVYF---------LCKDYSKALETYK----IGLKVDPN 177
Query: 370 AAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVA 412
+ NLA Y ++ + + A K +PN A+A
Sbjct: 178 HPFLNFNLAELYKEEKHYKEAINSYQTAMKTKPNWYEALAAIA 220
>gi|333987248|ref|YP_004519855.1| hypothetical protein MSWAN_1033 [Methanobacterium sp. SWAN-1]
gi|333825392|gb|AEG18054.1| Tetratricopeptide TPR_1 repeat-containing protein [Methanobacterium
sp. SWAN-1]
Length = 198
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/194 (20%), Positives = 74/194 (38%), Gaps = 30/194 (15%)
Query: 219 NSLDKE---------LEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSIS 269
N LDKE L+ + ++ L ++ D++ +WN GL ++
Sbjct: 9 NKLDKEECIMKGNKYLDEGKFDKALKCFDNGLKIDSKDVRLWNNKGLAFKGLKEFDKALK 68
Query: 270 VLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCK 329
L +DP D + + G+ ++ G+ E++ CF+ ++ D + A
Sbjct: 69 CFDKALKMDPEYVDVLQSKGVIFYDRGEYEKALSCFEKVVDLDPEYVKA----------- 117
Query: 330 YGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRS 389
NT +G L A +C AL+ D + +W ++
Sbjct: 118 ---------CNT-KGLVLGTTKKYQEAIKCFDKALELDSQNTDVWYGKGLVLGKAKKYQE 167
Query: 390 SGKCLEKAAKLEPN 403
+ KC +KA +L PN
Sbjct: 168 AIKCFDKALELNPN 181
>gi|256829994|ref|YP_003158722.1| PEP-CTERM system TPR-repeat lipoprotein [Desulfomicrobium baculatum
DSM 4028]
gi|256579170|gb|ACU90306.1| PEP-CTERM system TPR-repeat lipoprotein [Desulfomicrobium baculatum
DSM 4028]
Length = 884
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 74/172 (43%), Gaps = 21/172 (12%)
Query: 252 NTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILK 311
N G L K G +I + L DPN NLG+AY ++G M+Q+ + FQ ++L
Sbjct: 29 NAEGEALFKQGNYNGAIVHYKNALEKDPNFVAARYNLGLAYIETGKMDQAEREFQKVLL- 87
Query: 312 DQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAA 371
QN +N+ G A AV V ++A L+ P A
Sbjct: 88 -QNPYDGRVNF-----------------QLGRIANFQNKPAVAVP--LIMAYLQEHPDDA 127
Query: 372 HIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQ 423
LA + ++GD S+ LEKA +EP+ +S + + + +R++
Sbjct: 128 AALEQLAISATISGDPASAKGHLEKALAVEPDRISAKLGLVQIFMIQGDRAE 179
>gi|449449593|ref|XP_004142549.1| PREDICTED: probable UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase SEC-like [Cucumis
sativus]
Length = 975
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 110/263 (41%), Gaps = 38/263 (14%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 213
P+ A+ LG +Y+ LG P +A+ Y++A I +R IA L S
Sbjct: 262 PQFPDAYLNLGNVYKALGMPQEAIVCYQRA--IQMRPNYAIAYGNLAS------------ 307
Query: 214 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 273
E +L+ + K+++ D R +N LG L + GR++ +I +
Sbjct: 308 ---------TYYEQSQLDMAILHYKQAITCDPRFLEAYNNLGNALKEFGRVEEAIQCYNQ 358
Query: 274 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLI-----LKDQNHPAALI-----NYA 323
LA+ P++ + NLG Y + + +A ++ + L + A+I NYA
Sbjct: 359 CLALQPSHPQALTNLGNIYMEWNMVPAAASYYKATLRVTTGLSAPFNNLAIIYKQQGNYA 418
Query: 324 ALLLCKYGSVLA----GAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLAN 379
+ C Y VL A G + V+ A + + A+ P A ANLA+
Sbjct: 419 DAISC-YNEVLRIDPLAADGLVNRGNTYKEIGRVSEAIQDYIRAINIRPTMAEAHANLAS 477
Query: 380 AYYLTGDHRSSGKCLEKAAKLEP 402
AY +G ++ K ++A L P
Sbjct: 478 AYKDSGLVEAAIKSYKQALHLRP 500
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 76/174 (43%), Gaps = 21/174 (12%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
+ + ++K +E+++ + R A + + + G + +I + + PN CD NL
Sbjct: 110 DFDMCIAKNEEALRIEPRFAECYGNMANAWKEKGNIDLAIRYYLHAIELRPNFCDAWSNL 169
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLD 348
AY + G + ++A+C + AL L +L A +N G +
Sbjct: 170 ASAYMRKGRLGEAAQCCRQ----------------ALAL---NPLLVDAHSNLGN--LMK 208
Query: 349 QASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 402
V A C L AL+ P A W+NLA + +GD + + ++A KL+P
Sbjct: 209 AQGMVQEAYSCYLEALRIQPTFAIAWSNLAGLFMESGDLNRALQYYKEAVKLKP 262
Score = 40.0 bits (92), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 67/173 (38%), Gaps = 21/173 (12%)
Query: 230 LEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLG 289
++E S E+++ A+ W+ L + ++SG L ++ + + P D NLG
Sbjct: 213 VQEAYSCYLEALRIQPTFAIAWSNLAGLFMESGDLNRALQYYKEAVKLKPQFPDAYLNLG 272
Query: 290 IAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQ 349
Y G +++ C+Q I Q P I Y L Y +
Sbjct: 273 NVYKALGMPQEAIVCYQRAI---QMRPNYAIAYGNLASTYY------------------E 311
Query: 350 ASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 402
S +++A A+ DP+ + NL NA G + +C + L+P
Sbjct: 312 QSQLDMAILHYKQAITCDPRFLEAYNNLGNALKEFGRVEEAIQCYNQCLALQP 364
Score = 39.7 bits (91), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 79/203 (38%), Gaps = 16/203 (7%)
Query: 231 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 290
+E + + ++Q A+ + L + +L +I + DP + NLG
Sbjct: 282 QEAIVCYQRAIQMRPNYAIAYGNLASTYYEQSQLDMAILHYKQAITCDPRFLEAYNNLGN 341
Query: 291 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAG-------ANTGE 343
A + G +E++ +C+ + +HP AL N + + ++ V A A TG
Sbjct: 342 ALKEFGRVEEAIQCYNQCLALQPSHPQALTNLGNIYM-EWNMVPAAASYYKATLRVTTGL 400
Query: 344 GACLDQASAVNV-------AKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEK 396
A + + + A C L+ DP AA N N Y G + + +
Sbjct: 401 SAPFNNLAIIYKQQGNYADAISCYNEVLRIDPLAADGLVNRGNTYKEIGRVSEAIQDYIR 460
Query: 397 AAKLEPNCMSTRYAVAVSRIKDA 419
A + P M+ +A S KD+
Sbjct: 461 AINIRPT-MAEAHANLASAYKDS 482
>gi|449117458|ref|ZP_21753875.1| hypothetical protein HMPREF9726_01860 [Treponema denticola H-22]
gi|448950659|gb|EMB31480.1| hypothetical protein HMPREF9726_01860 [Treponema denticola H-22]
Length = 992
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 66/163 (40%), Gaps = 21/163 (12%)
Query: 250 VWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLI 309
+ N +G+I + SI +L A+D N + NLG Y Q+GD + + +CF D++
Sbjct: 79 ILNNMGVIYRRLNMFNESIVILEKAKAIDSKNETTLYNLGNTYKQNGDYKHAIQCFTDVL 138
Query: 310 LKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPK 369
P + Y L GSV C D + A+ K LK DP
Sbjct: 139 ---DIKPDDALAYNHL-----GSVYF---------LCKDYSKALETYK----IGLKVDPN 177
Query: 370 AAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVA 412
+ NLA Y ++ + + A K +PN A+A
Sbjct: 178 HPFLNFNLAELYKEEKHYKEAINSYQTAMKTKPNWYEALAAIA 220
>gi|449106403|ref|ZP_21743069.1| hypothetical protein HMPREF9729_01334 [Treponema denticola ASLM]
gi|451968112|ref|ZP_21921341.1| hypothetical protein HMPREF9728_00512 [Treponema denticola US-Trep]
gi|448964916|gb|EMB45582.1| hypothetical protein HMPREF9729_01334 [Treponema denticola ASLM]
gi|451703069|gb|EMD57451.1| hypothetical protein HMPREF9728_00512 [Treponema denticola US-Trep]
Length = 992
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 66/163 (40%), Gaps = 21/163 (12%)
Query: 250 VWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLI 309
+ N +G+I + SI +L A+D N + NLG Y Q+GD + + +CF D++
Sbjct: 79 ILNNMGVIYRRLNMFNESIVILEKAKAIDSKNETTLYNLGNTYKQNGDYKHAIQCFTDVL 138
Query: 310 LKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPK 369
P + Y L GSV C D + A+ K LK DP
Sbjct: 139 ---DIKPDDALAYNHL-----GSVYF---------LCKDYSKALETYK----IGLKVDPN 177
Query: 370 AAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVA 412
+ NLA Y ++ + + A K +PN A+A
Sbjct: 178 HPFLNFNLAELYKEEKHYKEAINSYQTAMKTKPNWYEALAAIA 220
>gi|326435668|gb|EGD81238.1| tetratricopeptide protein [Salpingoeca sp. ATCC 50818]
Length = 863
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 99/249 (39%), Gaps = 32/249 (12%)
Query: 163 LGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLD 222
+G + G+ KA++ YE A + LR E + +S + +A C S G+
Sbjct: 277 VGSVLSEFGEHDKAIAYYETALAVYLRTEKEKGENVAVSNNNLGNAYC----SKGEYDRA 332
Query: 223 KELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAV----- 277
++L + L E S A +N LG G +I LA+
Sbjct: 333 IAFYEKDLAITVETLGEKHPS---TASTYNNLGTAYYSKGDFDKAIHYYKKALAITVETL 389
Query: 278 ---DPNNCD-CIGNLGIAYFQSGDMEQSAKCFQDLILK-----DQNHPAALINYAALLLC 328
P+ D C+G LGIAY + G+++++ ++ + + HP Y +
Sbjct: 390 GEKHPSTADSCVG-LGIAYEKKGELDRAIAFYEQALAIMVEALGEKHPNTADTYNNI--- 445
Query: 329 KYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHR 388
GSV G C D+A AV V E L + P A + NL AY+ GD+
Sbjct: 446 --GSVYYSKGDYDRAIECFDKALAVRV--ETL---GEKHPSTAQTYNNLGGAYHDKGDYD 498
Query: 389 SSGKCLEKA 397
+ EKA
Sbjct: 499 KAIALYEKA 507
Score = 46.6 bits (109), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 65/161 (40%), Gaps = 31/161 (19%)
Query: 254 LGLILLKSGRLQSSISVLSSLLAV--------DPNNCDCIGNLGIAYFQSGDMEQSAKCF 305
LG+ K G L +I+ LA+ PN D N+G Y+ GD +++ +CF
Sbjct: 403 LGIAYEKKGELDRAIAFYEQALAIMVEALGEKHPNTADTYNNIGSVYYSKGDYDRAIECF 462
Query: 306 QDLI-----LKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECL 360
+ + HP+ Y + L GA + G D A+ + ++ L
Sbjct: 463 DKALAVRVETLGEKHPSTAQTY---------NNLGGAYHDKG-----DYDKAIALYEKAL 508
Query: 361 LAALKA----DPKAAHIWANLANAYYLTGDHRSSGKCLEKA 397
++A P A + NL AY G++ + C EKA
Sbjct: 509 AITVEALGEKHPSTATSYNNLGGAYARKGEYDKAIACYEKA 549
>gi|158521101|ref|YP_001528971.1| hypothetical protein Dole_1087 [Desulfococcus oleovorans Hxd3]
gi|158509927|gb|ABW66894.1| Tetratricopeptide TPR_2 repeat protein [Desulfococcus oleovorans
Hxd3]
Length = 808
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 83/193 (43%), Gaps = 23/193 (11%)
Query: 237 LKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSG 296
L+++++ +QA N+LG +LLK G+ + + +++DP NLG +G
Sbjct: 63 LRKAVEKAPKQAAFHNSLGQVLLKKGQTDEAAAAFQRAVSLDPGLAQAHFNLGKISKAAG 122
Query: 297 DMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVA 356
+++ F+ + +H AA N G++L AG N G AC +
Sbjct: 123 RADEAKTFFEKTLNLAPHHLAARNN--------LGNLLQQAGDNDGALACFE-------- 166
Query: 357 KECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRI 416
A LK +P+ A N+ N + L + + + E+A P + + ++RI
Sbjct: 167 -----AVLKINPRQAEAHYNIGNIHKLREEVEPAARYYEQAIACNPGFVPPY--IGLARI 219
Query: 417 KDAERSQEPTEQL 429
A R + E L
Sbjct: 220 HLANRRNDLAESL 232
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 72/173 (41%), Gaps = 23/173 (13%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 213
P+ A AH+ +G +++ + A YE+A + C P + L +IH A
Sbjct: 173 PRQAEAHYNIGNIHKLREEVEPAARYYEQA----IACNPGFV-PPYIGLARIHLA----- 222
Query: 214 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 273
+ N L + L ++++++ D + + L + L+ GR++ ++ V +
Sbjct: 223 --NRRNDLAESL-----------IRKALRMDPKNGEALSELANLYLREGRIEEAVPVFLA 269
Query: 274 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL 326
+ V P + G L AY G Q+ F+ + D + +Y LL
Sbjct: 270 AIRVSPEKAELHGALATAYSIRGATSQAMASFEKALELDPDSARTRFSYGNLL 322
>gi|4028023|gb|AAC96110.1| unknown [Desulfotomaculum thermocisternum]
Length = 224
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 63/146 (43%), Gaps = 21/146 (14%)
Query: 241 MQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQ 300
+QS+ A LG++L++ GRL+ + ++ +A + NLG YF+ G++E+
Sbjct: 18 LQSNPGCATAKYNLGVMLMEQGRLEEAKTLFEEAIADGTRMFEAYVNLGYIYFKQGNLEK 77
Query: 301 SAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECL 360
+C + L Q P YA L G Q + A E L
Sbjct: 78 VEECNR---LAVQIEPRYARGYANL------------------GFVYLQMEKPDEAIEVL 116
Query: 361 LAALKADPKAAHIWANLANAYYLTGD 386
A++ +P+ W NLANAY GD
Sbjct: 117 QKAIELNPRIIQAWCNLANAYLQKGD 142
Score = 41.6 bits (96), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 69/176 (39%), Gaps = 21/176 (11%)
Query: 225 LEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDC 284
+E LEE + +E++ TR + LG I K G L+ + ++P
Sbjct: 36 MEQGRLEEAKTLFEEAIADGTRMFEAYVNLGYIYFKQGNLEKVEECNRLAVQIEPRYARG 95
Query: 285 IGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEG 344
NLG Y Q +++ + Q I + A N LA A G+
Sbjct: 96 YANLGFVYLQMEKPDEAIEVLQKAIELNPRIIQAWCN------------LANAYLQKGD- 142
Query: 345 ACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKL 400
LD+A N L L+ P + NLA YYL GD + + L++A +L
Sbjct: 143 --LDRALETN------LKMLEIAPDFSLGHNNLAYVYYLKGDMNRAAEHLKQALEL 190
>gi|307718825|ref|YP_003874357.1| hypothetical protein STHERM_c11390 [Spirochaeta thermophila DSM
6192]
gi|306532550|gb|ADN02084.1| hypothetical protein STHERM_c11390 [Spirochaeta thermophila DSM
6192]
Length = 194
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 80/174 (45%), Gaps = 23/174 (13%)
Query: 258 LLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPA 317
LL+ GR + +I +L ++L +P++ + LG+A+ +SG ++ K + K++ P
Sbjct: 15 LLQQGRYEEAIPLLQNILYEEPDHAGALHRLGVAFTESGRQAEAIKTLSFALKKEEKDPD 74
Query: 318 ALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANL 377
Y A TG+ + AKE A++ P A NL
Sbjct: 75 IWEAYGC------------ACYRTGK---------LEEAKEAFEKAVELFPYHASALRNL 113
Query: 378 ANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVA--VSRIKDAERSQEPTEQL 429
++ D ++S +CLEK+ ++ P T +A++ +KD ++++E QL
Sbjct: 114 GVTLHVMKDFKASYRCLEKSREINPEDYLTLFALSNVCIHLKDFDQAREVLYQL 167
>gi|15678100|ref|NP_275215.1| O-linked GlcNAc transferase [Methanothermobacter thermautotrophicus
str. Delta H]
gi|2621106|gb|AAB84576.1| O-linked GlcNAc transferase [Methanothermobacter thermautotrophicus
str. Delta H]
Length = 403
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 66/305 (21%), Positives = 115/305 (37%), Gaps = 31/305 (10%)
Query: 259 LKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAA 318
LK G+ + ++ L PN+ + + + + E++ KC++ ++ + A
Sbjct: 27 LKQGKYKEALKEFRKALKASPNDPEILHYNAMTLLKLKRPEKALKCYEKILKNNPKLAEA 86
Query: 319 LINYAALL--LCKYGSVL-----------AGAGANTGEGACLDQASAVNVAKECLLAALK 365
N +L L +Y L G +GA LD A EC AL+
Sbjct: 87 WNNKGVVLKELKRYDEALECYERALQIDPQDDGTWNNKGALLDTIGKPEKAIECYEKALE 146
Query: 366 ADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQEP 425
+ K A W N N G + + +C EKA ++ + Y A+ ++ +R E
Sbjct: 147 INQKNAKAWYNKGNGLRSLGKYEEALECYEKALQINAEFVEAWYNKALI-FEELKRYDEA 205
Query: 426 TEQLSWAGNEMASILREGDPVQIEPPI--AWAGFAAVQKTHHEVAAAFETEEN--ELSKM 481
E G +QI+P W A+ T + A E E E+++
Sbjct: 206 LECY-------------GRALQIDPQDDGTWNNKGALLDTIGKPEKAIECYEKALEINQK 252
Query: 482 EECAGAGESAFLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLE 541
A + L++ + A EC AL+ + + WAN G + + +C E
Sbjct: 253 NAKAWNNKGVVLEELKRYDEALECYEKALEINLENDETWANKGVLLRKLGKYEEALECFE 312
Query: 542 KVLMV 546
K L +
Sbjct: 313 KALEI 317
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 102/261 (39%), Gaps = 36/261 (13%)
Query: 155 KNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPE 214
KNA A + G + LG+ +A+ YEKA L+ A+ V+ + + L+ E
Sbjct: 150 KNAKAWYNKGNGLRSLGKYEEALECYEKA----LQINAE--------FVEAWYNKALIFE 197
Query: 215 SSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSL 274
E + +E L ++Q D + WN G +L G+ + +I
Sbjct: 198 -----------ELKRYDEALECYGRALQIDPQDDGTWNNKGALLDTIGKPEKAIECYEKA 246
Query: 275 LAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL--LCKYGS 332
L ++ N N G+ + +++ +C++ + + + N LL L KY
Sbjct: 247 LEINQKNAKAWNNKGVVLEELKRYDEALECYEKALEINLENDETWANKGVLLRKLGKYEE 306
Query: 333 VLA-----------GAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAY 381
L A A +G L+ A +C ALK +P+ +W
Sbjct: 307 ALECFEKALEINPEFADAWEWKGIILEDLKKPEEALKCYEKALKLNPQDKTLWYMQGKTL 366
Query: 382 YLTGDHRSSGKCLEKAAKLEP 402
G H+ + K +KA K++P
Sbjct: 367 QKLGKHQKAKKSYKKALKIDP 387
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 67/325 (20%), Positives = 118/325 (36%), Gaps = 35/325 (10%)
Query: 241 MQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQ 300
++++ + A WN G++L + R ++ L +DP + N G G E+
Sbjct: 77 LKNNPKLAEAWNNKGVVLKELKRYDEALECYERALQIDPQDDGTWNNKGALLDTIGKPEK 136
Query: 301 SAKCFQDLILKDQNHPAALIN----------YAALLLCKYGSVLAGAG---ANTGEGACL 347
+ +C++ + +Q + A N Y L C ++ A A +
Sbjct: 137 AIECYEKALEINQKNAKAWYNKGNGLRSLGKYEEALECYEKALQINAEFVEAWYNKALIF 196
Query: 348 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 407
++ + A EC AL+ DP+ W N G + +C EKA LE N +
Sbjct: 197 EELKRYDEALECYGRALQIDPQDDGTWNNKGALLDTIGKPEKAIECYEKA--LEINQKNA 254
Query: 408 R----YAVAVSRIKDAERSQEPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFAAVQKT 463
+ V + +K + + E E+ + +E WA + +
Sbjct: 255 KAWNNKGVVLEELKRYDEALECYEK--------------ALEINLENDETWANKGVLLRK 300
Query: 464 HHEVAAAFETEENELSKMEECAGAGE--SAFLDQASAVNVAKECLLAALKADPKAAHIWA 521
+ A E E L E A A E L+ A +C ALK +P+ +W
Sbjct: 301 LGKYEEALECFEKALEINPEFADAWEWKGIILEDLKKPEEALKCYEKALKLNPQDKTLWY 360
Query: 522 NLANAYYLTGDHRSSGKCLEKVLMV 546
G H+ + K +K L +
Sbjct: 361 MQGKTLQKLGKHQKAKKSYKKALKI 385
Score = 46.2 bits (108), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 51/239 (21%), Positives = 89/239 (37%), Gaps = 44/239 (18%)
Query: 164 GLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLDK 223
G + +G+P KA+ YEKA EI +A+ + +G SL K
Sbjct: 125 GALLDTIGKPEKAIECYEKALEI-----------------NQKNAKAWYNKGNGLRSLGK 167
Query: 224 ELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCD 283
EE L ++++Q + W LI + R ++ L +DP +
Sbjct: 168 ------YEEALECYEKALQINAEFVEAWYNKALIFEELKRYDEALECYGRALQIDPQDDG 221
Query: 284 CIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGE 343
N G G E++ +C++ + +Q + A N +
Sbjct: 222 TWNNKGALLDTIGKPEKAIECYEKALEINQKNAKAWNN---------------------K 260
Query: 344 GACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 402
G L++ + A EC AL+ + + WAN G + + +C EKA ++ P
Sbjct: 261 GVVLEELKRYDEALECYEKALEINLENDETWANKGVLLRKLGKYEEALECFEKALEINP 319
>gi|118401580|ref|XP_001033110.1| TPR Domain containing protein [Tetrahymena thermophila]
gi|89287457|gb|EAR85447.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
Length = 3068
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/198 (21%), Positives = 88/198 (44%), Gaps = 16/198 (8%)
Query: 221 LDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPN 280
L+++ E ++E L +++Q D +LG + K G L+++I + +
Sbjct: 2553 LEQDKEENSIQEAFQYLTDAIQLDENNYECLISLGKLYDKQGELENAIKFTELAIQRPEH 2612
Query: 281 NCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLC--------KYGS 332
N + + LG Y ++ ++ +S +CF+ ++ ++ H +LI YA +L KY
Sbjct: 2613 NINSMYYLGTLYLKNKEITKSGECFKKVLQQNSEHIPSLIEYATILSLKGEFEKSKKYFK 2672
Query: 333 VLAGAGANT-------GEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTG 385
+ N G+ L++ + +N A +C + +PK + L AY
Sbjct: 2673 IALSKDPNNLICNLRLGK-IYLNKLNNINRAIDCFKQIISIEPKYSKAHFQLGMAYQSRK 2731
Query: 386 DHRSSGKCLEKAAKLEPN 403
D + + +C ++ + PN
Sbjct: 2732 DFKLAAECFKQCISINPN 2749
>gi|51244947|ref|YP_064831.1| hypothetical protein DP1095 [Desulfotalea psychrophila LSv54]
gi|50875984|emb|CAG35824.1| conserved hypothetical protein [Desulfotalea psychrophila LSv54]
Length = 209
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 81/176 (46%), Gaps = 21/176 (11%)
Query: 228 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 287
E+L +I+++L++ + + + LGL+ +K+GR+ +I+ L L +D + + + N
Sbjct: 7 EDLSQIIAELEKKCGQNPNSVMAVHHLGLVYMKAGRVDEAITCLEKALEIDDLSHESMIN 66
Query: 288 LGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL 347
LG YF G++ ++ + + I S A A+ G
Sbjct: 67 LGAIYFGQGNVAKAQELNERAI---------------------ASQPESAQAHANLGLIW 105
Query: 348 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 403
Q + ++ A A++ DPK +W NLA+ + G+ + + +KA ++P+
Sbjct: 106 QQQNELDKALASYEKAVQYDPKLITVWLNLASVLTMKGEDDRAVESSQKAIDIDPD 161
Score = 38.5 bits (88), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 71/158 (44%), Gaps = 22/158 (13%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 213
P + A LGL+Y + G+ +A++ EKA EI D++ +++L I+ Q +
Sbjct: 24 PNSVMAVHHLGLVYMKAGRVDEAITCLEKALEI-----DDLSHESMINLGAIYFGQGNVA 78
Query: 214 ESSGDNSLDKELEPE----------------ELEEILSKLKESMQSDTRQAVVWNTLGLI 257
++ N +PE EL++ L+ ++++Q D + VW L +
Sbjct: 79 KAQELNERAIASQPESAQAHANLGLIWQQQNELDKALASYEKAVQYDPKLITVWLNLASV 138
Query: 258 LLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIA-YFQ 294
L G ++ + +DP++ N+ +A YF+
Sbjct: 139 LTMKGEDDRAVESSQKAIDIDPDSPLAHNNMAVALYFK 176
>gi|357633166|ref|ZP_09131044.1| Tetratricopeptide TPR_1 repeat-containing protein [Desulfovibrio
sp. FW1012B]
gi|357581720|gb|EHJ47053.1| Tetratricopeptide TPR_1 repeat-containing protein [Desulfovibrio
sp. FW1012B]
Length = 741
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 75/191 (39%), Gaps = 21/191 (10%)
Query: 235 SKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQ 294
+K KE ++ W+ LGL L+ G +++ L +A PN+ D +LG AY
Sbjct: 146 AKAKEFLERFPESGKGWHLLGLSLVARGDGAAALEPLLRAVATLPNDVDLWDHLGSAYLH 205
Query: 295 SGDMEQSAKCFQDLILKDQNHPA-----------------ALINYAALLLCKYGSVLAGA 337
G EQ+A F+ + ++P+ A+ +Y L C+ +
Sbjct: 206 QGQPEQAANAFRRALALRPDYPSAHNNLGNALRELGQPQEAMASYRQALRCQPNHAM--- 262
Query: 338 GANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKA 397
A+T G L V A EC AL P N ANA G ++ +A
Sbjct: 263 -AHTNLGIVLQSQGQVQAALECHARALALAPANVEAHVNYANAQKELGHIEAAVAAYGRA 321
Query: 398 AKLEPNCMSTR 408
L+P + R
Sbjct: 322 LALDPERLEAR 332
>gi|313202444|ref|YP_004041102.1| hypothetical protein MPQ_2726 [Methylovorus sp. MP688]
gi|312441760|gb|ADQ85866.1| TPR repeat-containing protein [Methylovorus sp. MP688]
Length = 552
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 228 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 287
++ E LSK S+ + Q W +G I L++ + Q + + +L +DP+N D I
Sbjct: 23 QDYFEALSKYTASLSLEGNQVPTWVRIGKIFLRTMKYQQARETMEFVLGMDPHNVDAIYG 82
Query: 288 LGIAYFQSGDMEQSAKCFQD 307
L I+YF G +E+ A+ F D
Sbjct: 83 LAISYFYLGKLEE-ARAFID 101
>gi|405355263|ref|ZP_11024489.1| TPR repeat-containing protein [Chondromyces apiculatus DSM 436]
gi|397091605|gb|EJJ22407.1| TPR repeat-containing protein [Myxococcus sp. (contaminant ex DSM
436)]
Length = 639
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 116/297 (39%), Gaps = 34/297 (11%)
Query: 143 KTGLVHVAR--KMPKNAHAHFLLGLMYQRLGQPLKAVSSYEK---------------AEE 185
+T V AR P +A A + LG + L P KAV+ +K A
Sbjct: 26 RTAAVESARLESSPDDADALYRLGTAFLALNTPKKAVAPLKKLVAQEPDLIPPKLALARA 85
Query: 186 ILLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDT 245
+ L E + AR L + + + + L G L + L+ E + +S+ + +
Sbjct: 86 LRLSGEPEQARTVLDTAIAAYPDEATLRAERG--LLARVLD--ERDVAISQYAVAAELSP 141
Query: 246 RQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCF 305
+ A + LG L ++ R +I L +D NLG A + G ++ +
Sbjct: 142 QDAELRFNLGEALQRANRTDDAIEAYREALKLDAKLNVARVNLGKALAEKGLNGEAKETL 201
Query: 306 QDLILKDQNHPAALINYAALLL---------CKYGSVLAG----AGANTGEGACLDQASA 352
++ + A N LL+ +Y LA A A+ G L++
Sbjct: 202 REATRQKLGDTEAHYNLGVLLMRENDLDGAIAEYQRTLAADPKHAWAHNNLGVALNEKGD 261
Query: 353 VNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRY 409
A E L A+ ADPK A NL AYY GD+ + K EKA LEP S Y
Sbjct: 262 PRKATEAFLKAIAADPKFAEAQFNLGLAYYQLGDNVRALKAFEKAVVLEPRRSSGPY 318
Score = 45.8 bits (107), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 43/89 (48%), Gaps = 3/89 (3%)
Query: 232 EILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIA 291
E L K K+ ++DT LG++ + GR +++ L +++A DP + LG
Sbjct: 474 EGLLKPKDGEEADT---AALARLGIVHSRRGRPDQAVTELEAVVAKDPAQLEARAELGFI 530
Query: 292 YFQSGDMEQSAKCFQDLILKDQNHPAALI 320
Y + GD ++ K ++ D HP L+
Sbjct: 531 YLRGGDGAKAKKVLTSVLTVDPGHPLGLL 559
>gi|427715927|ref|YP_007063921.1| hypothetical protein Cal7507_0597 [Calothrix sp. PCC 7507]
gi|427348363|gb|AFY31087.1| Tetratricopeptide TPR_2 repeat-containing protein [Calothrix sp.
PCC 7507]
Length = 358
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 72/151 (47%), Gaps = 23/151 (15%)
Query: 248 AVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQD 307
A V+ LGL L + G+LQ +I+V + +D NN + NL IA G ++++ ++
Sbjct: 154 AAVYYNLGLALYEQGQLQEAIAVYQQAINLDSNNANAYFNLAIALQDQGQIQEAIANYRQ 213
Query: 308 LILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQAS-AVNVAKECLLAALKA 366
++ +D + A N GS++A G QAS A++ ++ A+
Sbjct: 214 VLQRDPKNDTAYNN--------IGSLMAIQG----------QASEAISAYQQ----AIDQ 251
Query: 367 DPKAAHIWANLANAYYLTGDHRSSGKCLEKA 397
+PK A + NL Y GD +++ L +A
Sbjct: 252 NPKNASAYYNLGVTLYKQGDIKTASDALNRA 282
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 79/161 (49%), Gaps = 14/161 (8%)
Query: 151 RKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLV---QIHH 207
R P + A++ LGL QR GQ A+++Y ++ +++ A + L+L Q+
Sbjct: 115 RVNPSSGEAYYNLGLALQRQGQKETAITAYRRS--LVINPTAAVYYNLGLALYEQGQLQE 172
Query: 208 A-----QCLLPESSGDNS---LDKELEPE-ELEEILSKLKESMQSDTRQAVVWNTLGLIL 258
A Q + +S+ N+ L L+ + +++E ++ ++ +Q D + +N +G ++
Sbjct: 173 AIAVYQQAINLDSNNANAYFNLAIALQDQGQIQEAIANYRQVLQRDPKNDTAYNNIGSLM 232
Query: 259 LKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDME 299
G+ +IS + +P N NLG+ ++ GD++
Sbjct: 233 AIQGQASEAISAYQQAIDQNPKNASAYYNLGVTLYKQGDIK 273
>gi|326430017|gb|EGD75587.1| mbre TPR repeat protein [Salpingoeca sp. ATCC 50818]
Length = 826
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 74/168 (44%), Gaps = 27/168 (16%)
Query: 248 AVVWNTLGLILLKSGRLQSSISVLSSLLAVD--------PNNCDCIGNLGIAYFQSGDME 299
A ++++LG+ K+G +I LA+ P+ GN G+ Y Q G+ +
Sbjct: 317 AGLYDSLGIAYTKTGEYDKAIEHFEKALAIKVEVLGEKHPSTAHTYGNFGLPYLQKGEND 376
Query: 300 QSAKCFQ-DLILK----DQNHPAALINYAALLLCKYGSVLAGAGANTGE-GACLDQ-ASA 352
Q+ K F+ L +K + HP + Y + + GA N E G ++Q A
Sbjct: 377 QAIKYFERSLAIKAETLGERHPDTALVY---------NNIGGAYENKAEYGKAIEQFQKA 427
Query: 353 VNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKL 400
+ V E L + P A + NL NAYY G H + + EKA ++
Sbjct: 428 LAVKVETLG---EKHPSTAQTYGNLGNAYYKQGKHDMAIEHAEKALQV 472
>gi|422340514|ref|ZP_16421455.1| TPR domain-containing protein [Treponema denticola F0402]
gi|325475688|gb|EGC78864.1| TPR domain-containing protein [Treponema denticola F0402]
Length = 992
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 65/163 (39%), Gaps = 21/163 (12%)
Query: 250 VWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLI 309
+ N +G+I + SI +L A+D N + NLG Y Q+GD + + +CF D++
Sbjct: 79 ILNNMGVIYRRLNMFNESIVILEKAKAIDSKNETTLYNLGNTYKQNGDYKHAIQCFTDVL 138
Query: 310 LKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPK 369
P + Y L GSV C D A+ K LK DP
Sbjct: 139 ---DIKPDDALAYNHL-----GSVYF---------LCKDYPKALETYK----IGLKVDPN 177
Query: 370 AAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVA 412
+ NLA Y ++ + + A K +PN A+A
Sbjct: 178 HPFLNFNLAELYKEEKHYKEAINSYQTAMKTKPNWYEALAAIA 220
>gi|124024108|ref|YP_001018415.1| hypothetical protein P9303_24171 [Prochlorococcus marinus str. MIT
9303]
gi|123964394|gb|ABM79150.1| Hypothetical protein P9303_24171 [Prochlorococcus marinus str. MIT
9303]
Length = 733
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 84/184 (45%), Gaps = 23/184 (12%)
Query: 163 LGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELL--------------SLVQIHHA 208
LG+ ++ G+ A++S+ KA EI + D PE+ + +
Sbjct: 258 LGIAFKAKGEISPAINSWRKALEI----KTDF--PEVYYNLGSIYLDQGNIETAINFFKK 311
Query: 209 QCLLPESSGD--NSLDKEL-EPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQ 265
+L E+ + N+L L E EL+ ++ K+++ N LG + G L+
Sbjct: 312 ALILKENYPEALNNLGNSLQEKGELDAAIAAYKKALNHKPSYREAQNNLGCVYRAQGDLE 371
Query: 266 SSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAAL 325
+SI + LA+ P++ + + NLG + + GD+E + F + I + N+P A N +
Sbjct: 372 NSIRIFKKALALHPDHPEILSNLGTSLEEKGDLEAAISSFNNAISNNSNYPTAHYNLSLC 431
Query: 326 LLCK 329
LL K
Sbjct: 432 LLSK 435
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 56/108 (51%), Gaps = 3/108 (2%)
Query: 220 SLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDP 279
SL +E +E EEI ++L +++ T + + +LG+I GR Q I++L L ++P
Sbjct: 23 SLFQEGRIKEAEEIYTRL---IKAGTNNHLTYGSLGIIYGIEGRWQELIAILEKALKLEP 79
Query: 280 NNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLL 327
N D +GIA + ++E + + FQ + + N P + N LL
Sbjct: 80 NYSDAHNYIGIALKRLDNLEAAVESFQKALSINPNCPKSNYNLGNALL 127
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 65/305 (21%), Positives = 114/305 (37%), Gaps = 50/305 (16%)
Query: 101 GKCRSRISSKMDSALEFGVDADGDQSGLGTSSSSREEKVSSLK--TGLVHVARKMPKNAH 158
GK S I+ + +A++F D LG + + + +++ +H+ P+
Sbjct: 130 GKLDSAIAF-LKTAVDFKPDFSEAHYNLGIAYLAIDNIAAAINYLNNSLHLKPAFPE--- 185
Query: 159 AHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESSGD 218
AH LGL Q G+ A+SS+ KA EI +PE PE+ +
Sbjct: 186 AHNSLGLALQAKGEKNLAISSFIKALEI---------KPEF-------------PEACYN 223
Query: 219 NSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVD 278
L ++E ++ +++ N LG+ G + +I+ L +
Sbjct: 224 LGF-IYLNQGDIETAINYFNKALLLKWNYPEALNNLGIAFKAKGEISPAINSWRKALEIK 282
Query: 279 PNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAG 338
+ + NLG Y G++E + F+ ++ +N+P AL N
Sbjct: 283 TDFPEVYYNLGSIYLDQGNIETAINFFKKALILKENYPEALNNL---------------- 326
Query: 339 ANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAA 398
G L + ++ A AL P NL Y GD +S + +KA
Sbjct: 327 -----GNSLQEKGELDAAIAAYKKALNHKPSYREAQNNLGCVYRAQGDLENSIRIFKKAL 381
Query: 399 KLEPN 403
L P+
Sbjct: 382 ALHPD 386
>gi|124008152|ref|ZP_01692850.1| O-linked GlcNAc transferase [Microscilla marina ATCC 23134]
gi|123986400|gb|EAY26213.1| O-linked GlcNAc transferase [Microscilla marina ATCC 23134]
Length = 425
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 79/178 (44%), Gaps = 9/178 (5%)
Query: 155 KNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPE 214
K A + LG Y L Q KA+ YEKA +I ++ + + ++I+ E
Sbjct: 198 KFEKAWYNLGATYVDLKQYEKAIPCYEKAIDIKPDFDSWYSLGLTYTDMKIYEKAIYCFE 257
Query: 215 SSGDNSLDKEL---------EPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQ 265
+ + + + EL ++ EE + K+S++ + +VW LG+ GR +
Sbjct: 258 KAIEINPETELWYILGVTYSNLQKHEEAIPYYKKSLEINPNNPLVWYNLGITYANLGRDR 317
Query: 266 SSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYA 323
++ + ++P NLGI Y G+ E+S CFQ ++ + N AL N A
Sbjct: 318 DALPCFEKAVGLNPEFDLVWYNLGIIYINLGEYEKSIPCFQRVVEEKPNFDKALYNIA 375
>gi|386346909|ref|YP_006045158.1| hypothetical protein [Spirochaeta thermophila DSM 6578]
gi|339411876|gb|AEJ61441.1| Tetratricopeptide TPR_2 repeat-containing protein [Spirochaeta
thermophila DSM 6578]
Length = 194
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 79/174 (45%), Gaps = 23/174 (13%)
Query: 258 LLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPA 317
LL+ GR + +I +L ++L +P++ + LG+A+ +SG ++ K + K++ P
Sbjct: 15 LLQQGRYEEAIPLLQNILYEEPDHAGALHRLGVAFTESGRQGEAIKTLSFALKKEEKDPD 74
Query: 318 ALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANL 377
Y AC + + AKE A++ P A NL
Sbjct: 75 IWEAYGC--------------------ACYRRGK-LEEAKEAFEKAVELFPYHASALRNL 113
Query: 378 ANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVA--VSRIKDAERSQEPTEQL 429
++ D ++S +CLEK+ ++ P T +A++ +KD ++++E QL
Sbjct: 114 GVTLHVMKDFKASYRCLEKSREINPEDYLTLFALSNVCIHLKDFDQAREVLYQL 167
>gi|386813343|ref|ZP_10100567.1| conserved hypothetical protein [planctomycete KSU-1]
gi|386402840|dbj|GAB63448.1| conserved hypothetical protein [planctomycete KSU-1]
Length = 411
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/189 (21%), Positives = 78/189 (41%), Gaps = 25/189 (13%)
Query: 214 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 273
E SGD+ L ++ + + ++++ D +Q + N G + L+ G + ++
Sbjct: 162 EKSGDDYLRRD----NIGMAFIQYDKALRLDPKQTGIRNKTGHLFLRRGLTEEAMREFEE 217
Query: 274 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSV 333
++ DP N G+ + G+++ + + F+ + D A
Sbjct: 218 VIKNDPLNAPAYEGKGMVFIARGNLDTAKEYFRQAVQLDSKRWQA--------------- 262
Query: 334 LAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKC 393
+T G D+ VA A+K +P A ++ NL +YYL G++ S +
Sbjct: 263 ------HTLLGIIHDRQGEFAVAINEYHNAIKINPNAGILYNNLGMSYYLKGEYEKSVEA 316
Query: 394 LEKAAKLEP 402
L A K+EP
Sbjct: 317 LTTALKIEP 325
>gi|269925204|ref|YP_003321827.1| hypothetical protein Tter_0083 [Thermobaculum terrenum ATCC BAA-798]
gi|269788864|gb|ACZ41005.1| Tetratricopeptide TPR_2 repeat protein [Thermobaculum terrenum ATCC
BAA-798]
Length = 2240
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 73/321 (22%), Positives = 130/321 (40%), Gaps = 37/321 (11%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
E EE LS +++ + D R A LG K GR+ ++ L L++DPNN L
Sbjct: 988 EEEEALSHFRKAARLDARNAQYALDLGACASKLGRVNEGLTWLEKALSLDPNNGQAHAEL 1047
Query: 289 GIAYFQSGDMEQSAKCFQ-DLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL 347
G+ G E++ F+ L++ +QN ++Y L YG ACL
Sbjct: 1048 GMLMGSRGQWEEALAHFRASLLIDEQN-----VDY----LHMYGI------------ACL 1086
Query: 348 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 407
A A + L AL DP+ A ++ A A + G + + L++A +L+ +S
Sbjct: 1087 -HTDATEDAIKTLERALALDPRRADVYVTYAEALEIAGKRDEAIQNLQEAVRLDDTNVSY 1145
Query: 408 RYAVAVSRIKDAERSQEPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFAAVQKT--HH 465
+ + S ++ Q+ + L ++ E E + + +K HH
Sbjct: 1146 KVKLG-SMLRRYGEYQDAEDLLLKCTDDHP----ESAQAHSELGMLYMDLGLQEKALRHH 1200
Query: 466 EVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKADPKAAHIWANLAN 525
E+A + + E A L A + +L A++A+P+AA + L
Sbjct: 1201 EIACSLDDRSPEYKYRMALA-------LIHLKRYAEAIDTILTAIQANPEAAEYYHALGR 1253
Query: 526 AYYLTGDHRSSGKCLEKVLMV 546
A+ + + + EK + +
Sbjct: 1254 AHMGLSQYEEAVQAFEKAVRI 1274
Score = 39.3 bits (90), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 69/325 (21%), Positives = 123/325 (37%), Gaps = 31/325 (9%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
EL L+ K++ D A +G I + G+ Q S+ L + + PN D + +
Sbjct: 1532 ELTSALALYKQAAMLDPLNADYHRKIGSIYRQLGKTQESLQSLQKAIDLAPNAPDSLFEI 1591
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLD 348
G Y Q+ +++ K Q ++P +Y ++ L L
Sbjct: 1592 GQLYLQTDRFDEACKVLQKATQLAPDNPTYRFHYGLAIM-----RLKEREDKLRSARLLA 1646
Query: 349 QASAVNVAK--ECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMS 406
+S V+ A+ E + AAL+ + A L Y L D+ S+ AA ++ +C
Sbjct: 1647 SSSQVSYAQAIEEIEAALRIEHNHADWHNTLGELYELVDDYESALHHFRWAADIDSDCAL 1706
Query: 407 TRY--AVAVSRIKDAERSQEPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFAAVQKTH 464
+Y +++D +R + +MA V+++P A A ++ + T+
Sbjct: 1707 FQYNQGRIYKKLRDYDR--------AIRAFQMA--------VRLDPEFAQA-YSELGATY 1749
Query: 465 HEVAAAFETEENELSKMEECAGAGES-----AFLDQASAVNVAKECLLAALKADPKAAHI 519
+ V E N ++ G + + Q A L A + DP+ I
Sbjct: 1750 NMVGNHSEALINYERALQIRPDDGLTLRRLGSTYRQMKRFKDAISILQKAAEIDPQDPEI 1809
Query: 520 WANLANAYYLTGDHRSSGKCLEKVL 544
+ L AY G HR + E L
Sbjct: 1810 YNELGLAYRAQGKHREALAEFEHAL 1834
Score = 38.9 bits (89), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 59/287 (20%), Positives = 120/287 (41%), Gaps = 47/287 (16%)
Query: 138 KVSSLKTGLVHVARKM---PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADI 194
K+ + GL + + + P N AH LG++ GQ +A++ + + LL E ++
Sbjct: 1019 KLGRVNEGLTWLEKALSLDPNNGQAHAELGMLMGSRGQWEEALAHFRAS---LLIDEQNV 1075
Query: 195 ARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTL 254
+ ++ CL +++ E+ + L+ ++ D R+A V+ T
Sbjct: 1076 ------DYLHMYGIACLHTDAT--------------EDAIKTLERALALDPRRADVYVTY 1115
Query: 255 GLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILK-DQ 313
L +G+ +I L + +D N LG + G+ + + +DL+LK
Sbjct: 1116 AEALEIAGKRDEAIQNLQEAVRLDDTNVSYKVKLGSMLRRYGEYQDA----EDLLLKCTD 1171
Query: 314 NHPAALINYAALLLCKYGSVLAGAGANTGEGAC-LDQASA----------VNVAK----- 357
+HP + ++ L + L E AC LD S +++ +
Sbjct: 1172 DHPESAQAHSELGMLYMDLGLQEKALRHHEIACSLDDRSPEYKYRMALALIHLKRYAEAI 1231
Query: 358 ECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNC 404
+ +L A++A+P+AA + L A+ + + + EKA ++ P+
Sbjct: 1232 DTILTAIQANPEAAEYYHALGRAHMGLSQYEEAVQAFEKAVRIAPSV 1278
Score = 38.9 bits (89), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 89/465 (19%), Positives = 172/465 (36%), Gaps = 96/465 (20%)
Query: 163 LGLMYQRLGQPLKAVSSYEKAEEI-------------LLRCEA--DIARPELLSLVQI-- 205
LG+ Y+R G +AV ++EKA E+ +LR + D+A L +++
Sbjct: 1319 LGICYERRGWLHEAVQAFEKAIELQPGEPVYLSNAGNVLRQQRKHDLALQHLQKAIELDS 1378
Query: 206 -----HHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLK 260
+H L+ + G ++ + S+ LG+++
Sbjct: 1379 NFAEPYHQMALVMQDMG-----------RFDDAYDLFQRSISLSPDNPRYHYNLGILMRS 1427
Query: 261 SGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQD------------- 307
G L +I+ +S + + PNN + L YFQ G ++++ K ++
Sbjct: 1428 QGDLHDAINQVSKAIDIQPNNAEWHSTLADLYFQIGMLDKARKEAEEASRLDPDNYRYHR 1487
Query: 308 ----LILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAA 363
+ + Q+ AL + L C A A + + A + SA+ + K+ +
Sbjct: 1488 QLSVIARETQDLDQALASARQALKCAPDEPQAIAELASVQEALGELTSALALYKQAAM-- 1545
Query: 364 LKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVA-----VSRIKD 418
DP A + + Y G + S + L+KA L PN + + + R +
Sbjct: 1546 --LDPLNADYHRKIGSIYRQLGKTQESLQSLQKAIDLAPNAPDSLFEIGQLYLQTDRFDE 1603
Query: 419 AERSQEPTEQL-----SWAGNEMASILR---EGDPVQIEPPIAWAGFAAVQKTHHEVAAA 470
A + + QL ++ + +I+R D ++ +A + + + E+ AA
Sbjct: 1604 ACKVLQKATQLAPDNPTYRFHYGLAIMRLKEREDKLRSARLLASSSQVSYAQAIEEIEAA 1663
Query: 471 FETEENE------LSKMEECAGAGESAFLDQASAVNVAKECLL----------------- 507
E N L ++ E ESA A ++ +C L
Sbjct: 1664 LRIEHNHADWHNTLGELYELVDDYESALHHFRWAADIDSDCALFQYNQGRIYKKLRDYDR 1723
Query: 508 ------AALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKVLMV 546
A++ DP+ A ++ L Y + G+H + E+ L +
Sbjct: 1724 AIRAFQMAVRLDPEFAQAYSELGATYNMVGNHSEALINYERALQI 1768
>gi|441498019|ref|ZP_20980223.1| TPR repeat protein [Fulvivirga imtechensis AK7]
gi|441438247|gb|ELR71587.1| TPR repeat protein [Fulvivirga imtechensis AK7]
Length = 254
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 102/223 (45%), Gaps = 23/223 (10%)
Query: 146 LVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILL-RCEADIARPEL-LSLV 203
L +V + +P +A +F +GL+ ++ + +A++ +++A ++ E I R + L
Sbjct: 30 LEYVKKSIPDSATVYFRMGLVKAKMRKFEEAIADFDQAWKLDSGNAETLINRGTVKYYLR 89
Query: 204 QIHHAQCLLPESSGDNSLDK---------ELEPEELEEILSKLKESMQSDTRQAVVWNTL 254
++ A+ L + + L+ E+E E+ ++ L + E++ + Q N
Sbjct: 90 RLDDAENDLKRALERSPLEPNAYNALALIEVEREDYDKALDLVNEALNYEPGQPYFLNNR 149
Query: 255 GLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQN 314
G + L GRL + + + + +DPNN N G Y+ SG+ + + Q ++ D
Sbjct: 150 GFVYLLQGRLDKAKADIDRSITIDPNNAWAYRNKGWYYYLSGNYTDAIRLLQRALVLD-- 207
Query: 315 HPAALINYAALLLCKYGSVLAGAGANTGEGAC--LDQASAVNV 355
++ LLL + A GA EG C L +A A NV
Sbjct: 208 ---PYVDRGHLLLAQ-----AQIGAGDIEGGCKSLRKAVANNV 242
>gi|406982243|gb|EKE03586.1| hypothetical protein ACD_20C00180G0001, partial [uncultured
bacterium]
Length = 521
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 99/244 (40%), Gaps = 32/244 (13%)
Query: 244 DTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAK 303
D QA + LG++L + RL SI+ ++ ++P+ + NLG + + G+ E++
Sbjct: 38 DYFQAYL--NLGILLAEKERLDDSIACFEKVIQLNPDYAEGYYNLGNSLQEKGEFEKAQL 95
Query: 304 CFQDLILKDQNHPAALINYAALLLCK----------YGSVL----AGAGANTGEGACLDQ 349
CFQ + + A N L+L K Y + + G+ L++
Sbjct: 96 CFQKSVELKSDFTEAYNN-LGLILSKQLQFDKAMEYYKKAIDLDPDYCDSYINLGSALNE 154
Query: 350 ASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRY 409
A++ AL+ P A + NL ++YL+ D S +C +KA ++P +
Sbjct: 155 KGQSEEARKYFHKALEIKPDFAEAYINLGKSFYLSTDLEESEECYQKALLIKPEYADAYF 214
Query: 410 AVAVSRIKDAERSQEPTEQLSWAGNEMASILRE----GDPVQIEPPIAWAGFAAVQKT-- 463
+A+ + + W E L + P +P WAG + KT
Sbjct: 215 GLALINLLKGNFDK------GWEYYEYRFSLYDQKFLKKPAFTKP--KWAGESLQNKTIL 266
Query: 464 -HHE 466
HHE
Sbjct: 267 IHHE 270
Score = 40.4 bits (93), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 51/103 (49%), Gaps = 3/103 (2%)
Query: 219 NSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVD 278
NSL ++ E E+ + K E ++SD +A +N LGLIL K + ++ + +D
Sbjct: 82 NSLQEKGEFEKAQLCFQKSVE-LKSDFTEA--YNNLGLILSKQLQFDKAMEYYKKAIDLD 138
Query: 279 PNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALIN 321
P+ CD NLG A + G E++ K F + + A IN
Sbjct: 139 PDYCDSYINLGSALNEKGQSEEARKYFHKALEIKPDFAEAYIN 181
>gi|147769448|emb|CAN74770.1| hypothetical protein VITISV_014241 [Vitis vinifera]
Length = 306
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 76/174 (43%), Gaps = 21/174 (12%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
+ + +++ +E++Q D R A + + + G + +I + + PN CD NL
Sbjct: 111 DFDMCIARNEEALQIDPRFAECYGNMANAWKEKGNVDLAIRYYLIAIELRPNFCDAWSNL 170
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLD 348
AY + G + ++A+C + A IN +L A +N G +
Sbjct: 171 ASAYMRKGRLNEAAQCCRQ---------ALAIN----------PLLVDAHSNLGN--FMK 209
Query: 349 QASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 402
+ A C + AL+ P A W+NLA + +GD + + ++A KL+P
Sbjct: 210 AQGLIQEAYSCYIEALRIQPSFAIAWSNLAGLFMESGDLTRALQYYKEAVKLKP 263
>gi|150395286|ref|YP_001325753.1| TonB-dependent receptor [Sinorhizobium medicae WSM419]
gi|150026801|gb|ABR58918.1| TonB-dependent receptor [Sinorhizobium medicae WSM419]
Length = 1198
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 74/175 (42%), Gaps = 21/175 (12%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
+LE LS L ++Q+ + +WN LGL+ G +++ + +A+DP + NL
Sbjct: 423 DLEGALSDLNRALQTAPGSSSIWNALGLVQGARGDNRAAEAAFKQAIALDPLDPVSHANL 482
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLD 348
I Y M ++ + + D + AL+ G
Sbjct: 483 AIQYLDEMRMAEAKREIDTALSVDPSFDVALV---------------------ARGRYQM 521
Query: 349 QASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 403
Q V+ A E LLA A+P ++ LA A+Y GD + + L+ A +L+PN
Sbjct: 522 QNGDVDRAVEDLLAGSTANPAYSNAQLLLAAAHYEKGDRIPAAQALDNADRLDPN 576
>gi|449103568|ref|ZP_21740313.1| hypothetical protein HMPREF9730_01210 [Treponema denticola AL-2]
gi|448964722|gb|EMB45390.1| hypothetical protein HMPREF9730_01210 [Treponema denticola AL-2]
Length = 992
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 65/163 (39%), Gaps = 21/163 (12%)
Query: 250 VWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLI 309
+ N +G+I + SI +L A+D N + NLG Y Q+GD + + +CF D++
Sbjct: 79 ILNNMGVIYRRLNMFNESIVILEKAKAIDSKNETTLYNLGNTYKQNGDYKHAIQCFTDVL 138
Query: 310 LKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPK 369
P + Y L GSV C D A+ K LK DP
Sbjct: 139 ---DIKPDDALAYNHL-----GSVYF---------LCKDYPKALETYK----IGLKVDPN 177
Query: 370 AAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVA 412
+ NLA Y ++ + + A K +PN A+A
Sbjct: 178 HPFLNFNLAELYKEEKHYKEAINSYQTAMKTKPNWYEALAAIA 220
>gi|449118470|ref|ZP_21754879.1| hypothetical protein HMPREF9725_00344 [Treponema denticola H1-T]
gi|449123612|ref|ZP_21759937.1| hypothetical protein HMPREF9727_02697 [Treponema denticola MYR-T]
gi|448945436|gb|EMB26308.1| hypothetical protein HMPREF9727_02697 [Treponema denticola MYR-T]
gi|448952847|gb|EMB33644.1| hypothetical protein HMPREF9725_00344 [Treponema denticola H1-T]
Length = 992
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 65/163 (39%), Gaps = 21/163 (12%)
Query: 250 VWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLI 309
+ N +G+I + SI +L A+D N + NLG Y Q+GD + + +CF D++
Sbjct: 79 ILNNMGVIYRRLNMFNESIVILEKAKAIDSKNETTLYNLGNTYKQNGDYKHAIQCFTDVL 138
Query: 310 LKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPK 369
P + Y L GSV C D A+ K LK DP
Sbjct: 139 ---DIKPDDALAYNHL-----GSVYF---------LCKDYPKALETYK----IGLKVDPN 177
Query: 370 AAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVA 412
+ NLA Y ++ + + A K +PN A+A
Sbjct: 178 HPFLNFNLAELYKEEKHYKEAINSYQTAMKTKPNWYEALAAIA 220
>gi|42525963|ref|NP_971061.1| TPR [Treponema denticola ATCC 35405]
gi|449112904|ref|ZP_21749450.1| hypothetical protein HMPREF9735_02499 [Treponema denticola ATCC
33521]
gi|449114880|ref|ZP_21751348.1| hypothetical protein HMPREF9721_01866 [Treponema denticola ATCC
35404]
gi|41816013|gb|AAS10942.1| TPR domain protein [Treponema denticola ATCC 35405]
gi|448954323|gb|EMB35105.1| hypothetical protein HMPREF9721_01866 [Treponema denticola ATCC
35404]
gi|448955021|gb|EMB35789.1| hypothetical protein HMPREF9735_02499 [Treponema denticola ATCC
33521]
Length = 992
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 65/163 (39%), Gaps = 21/163 (12%)
Query: 250 VWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLI 309
+ N +G+I + SI +L A+D N + NLG Y Q+GD + + +CF D++
Sbjct: 79 ILNNMGVIYRRLNMFNESIVILEKAKAIDSKNETTLYNLGNTYKQNGDYKHAIQCFTDVL 138
Query: 310 LKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPK 369
P + Y L GSV C D A+ K LK DP
Sbjct: 139 ---DIKPDDALAYNHL-----GSVYF---------LCKDYPKALETYK----IGLKVDPN 177
Query: 370 AAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVA 412
+ NLA Y ++ + + A K +PN A+A
Sbjct: 178 HPFLNFNLAELYKEEKHYKEAINSYQTAMKTKPNWYEALAAIA 220
>gi|182415012|ref|YP_001820078.1| hypothetical protein Oter_3198 [Opitutus terrae PB90-1]
gi|177842226|gb|ACB76478.1| Tetratricopeptide TPR_2 repeat protein [Opitutus terrae PB90-1]
Length = 645
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 92/208 (44%), Gaps = 18/208 (8%)
Query: 128 LGTSSSSREEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEIL 187
L S REE +++ + V R P + AH LGL RLG +A++ YE+A E+
Sbjct: 432 LARSPERREEAIAAYR----EVLRLKPDHPDAHHGLGLELARLGDKAQAMAEYERAIELR 487
Query: 188 L-------RCEADIARPELLSLVQIHHAQCLLPESSG-----DNSLDKELE-PEELEEIL 234
R ++AR I H + L G N D L+ P+ L E +
Sbjct: 488 PTYAEAHHRLGVELARLGGRDQDAIAHLEAALRVKPGLAEAHANLADLLLKTPDRLPEAM 547
Query: 235 SKLKESMQSDTRQAVVWNTLGLILLK-SGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYF 293
+ +E++ D A V +G +L GR +IS + L ++PN+ D L IAY
Sbjct: 548 AHYEEALHFDPTLAWVHCRIGFVLSHLPGRQHEAISRYETALRIEPNSIDAHNGLAIAYI 607
Query: 294 QSGDMEQSAKCFQDLILKDQNHPAALIN 321
G + + + ++ ++ D + +A N
Sbjct: 608 MMGRADAARREWETVVRIDPSQESARRN 635
>gi|405364956|ref|ZP_11026402.1| MJ0042 family finger-like domain/tetratricopeptide repeat protein
[Chondromyces apiculatus DSM 436]
gi|397089521|gb|EJJ20430.1| MJ0042 family finger-like domain/tetratricopeptide repeat protein
[Myxococcus sp. (contaminant ex DSM 436)]
Length = 1350
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 93/210 (44%), Gaps = 17/210 (8%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
+LEE +++L+++ D R + TLG +LL+ G L + S L L+ +P+N + + L
Sbjct: 1079 QLEEAVAELEKAKTEDPRSTTIPITLGAVLLERGDLPGAESNLGLALSNEPSNHEALYYL 1138
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLD 348
+ + + Q+ + + + N P +YA ++ + L A A + LD
Sbjct: 1139 ALVKAKRLEFTQAMDNMRKAVERAPNRPD--YHYAYGVILRDAKNLPDAMAAWRKAVELD 1196
Query: 349 ---------------QASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKC 393
++S + A ++LKADP+ + ++ +AY+ + K
Sbjct: 1197 RNHADGHEALGHALLESSQFDEAIAAFESSLKADPRRTRVLGSIGDAYFAAARWNDAIKR 1256
Query: 394 LEKAAKLEPNCMSTRYAVAVSRIKDAERSQ 423
+ A K +P Y VA + + A+ ++
Sbjct: 1257 YQSALKADPKLAYVYYKVARAFTEQAQHAK 1286
>gi|260893921|ref|YP_003240018.1| hypothetical protein Adeg_2091 [Ammonifex degensii KC4]
gi|260866062|gb|ACX53168.1| Tetratricopeptide TPR_2 repeat protein [Ammonifex degensii KC4]
Length = 212
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 66/172 (38%), Gaps = 21/172 (12%)
Query: 230 LEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLG 289
LEE E++Q+ R W LG I K G L+ I + + ++P NLG
Sbjct: 41 LEEAEDYFLEAIQNGLRMFEAWVNLGYIYFKRGELEKVIEANKAAIEIEPRYSRGYANLG 100
Query: 290 IAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQ 349
AY Q E++ + + + A N L A G D
Sbjct: 101 FAYLQLERTEEAISALEKALELEPRMAQAWCN------------LVSAYLQKG-----DI 143
Query: 350 ASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLE 401
A+ V K A++ P NLA AYYL GD+ + + LE A K +
Sbjct: 144 DKAIEVGK----TAVEVAPDFGLAHNNLACAYYLKGDYERAAEHLELALKYQ 191
Score = 42.4 bits (98), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 49/94 (52%), Gaps = 3/94 (3%)
Query: 225 LEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDC 284
L+ E EE +S L+++++ + R A W L L+ G + +I V + + V P+
Sbjct: 104 LQLERTEEAISALEKALELEPRMAQAWCNLVSAYLQKGDIDKAIEVGKTAVEVAPDFGLA 163
Query: 285 IGNLGIAYFQSGDMEQSAKCFQDLILKDQN--HP 316
NL AY+ GD E++A+ +L LK Q HP
Sbjct: 164 HNNLACAYYLKGDYERAAEHL-ELALKYQFPVHP 196
>gi|351707255|gb|EHB10174.1| Transmembrane and TPR repeat-containing protein 1 [Heterocephalus
glaber]
Length = 780
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 89/424 (20%), Positives = 172/424 (40%), Gaps = 68/424 (16%)
Query: 153 MPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEI-------------LLRCEADIARPEL 199
+P NA H+ + G+ +A+ Y A ++ L+R A+ R
Sbjct: 377 LPHNAKVHYNYANFLKDQGRNREAIYHYRTALKLYPRHASALNNLGTLMRDTAEAKRYYQ 436
Query: 200 LSLVQIH--HAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLI 257
+L Q+H H++ L + N L + E+ EE ++ LKES++ A +++L +
Sbjct: 437 RAL-QLHPKHSRALF---NLGNLLKSQ---EKKEEAVALLKESIKYGPEFADAYSSLASL 489
Query: 258 LLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPA 317
L + R + + + + + P++ D N G+ SG E++A +Q ++ +H
Sbjct: 490 LAEQERFKEAEEIYQAGIKNCPDSSDLHNNYGVFLVDSGSPEKAAAHYQQAVILSPHHHV 549
Query: 318 ALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANL 377
A++N G + G N ++A+E AL+ + A + L
Sbjct: 550 AMVN--------LGRLYRSLGEN-------------DMAEEWYKRALQVA-REAETLSPL 587
Query: 378 ANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVA-----VSRIKDAERSQEPTEQLSWA 432
YY TG + + + +A L+P R A+A + + K+AE+ TE +
Sbjct: 588 GALYYNTGRYEEALQVYHEAVALQPLQRELRLALAQVLAVMGQTKEAEKM---TEHIVSE 644
Query: 433 GNEMASILREGDPVQIEPPIAWAGFAAVQKTH----HEVAAAFETEENELSKMEECAGAG 488
G E R + + Q+ H H + A + + + + E
Sbjct: 645 GAECLECYR-----------LLSAIYSKQQDHDKALHAIDKALQLKPKDPKVVSELFFTK 693
Query: 489 ESAFLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKVLMVYC 548
+ +Q + ++ A E AA+ +P+ A W N+ ++ G + S+ E+ L +
Sbjct: 694 GNQLREQ-NLLDKAFESYNAAVALNPEQAQAWMNMGGIQHIKGKYMSARAYYERALQLVP 752
Query: 549 SSNL 552
S L
Sbjct: 753 DSKL 756
>gi|158522636|ref|YP_001530506.1| hypothetical protein Dole_2626 [Desulfococcus oleovorans Hxd3]
gi|158511462|gb|ABW68429.1| TPR repeat-containing protein [Desulfococcus oleovorans Hxd3]
Length = 587
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 71/155 (45%), Gaps = 23/155 (14%)
Query: 255 GLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQN 314
G +L GR +I L + LAVDPNN +LG A +G+ E + + F+ + +
Sbjct: 442 GEVLFLHGRNAEAIGQLEAALAVDPNNALAHYHLGRAMESAGNSEAAMRHFEKAVYLQPD 501
Query: 315 H-PAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHI 373
H PA N LLC G + D+A V+ AL ADP A +
Sbjct: 502 HVPAR--NSLGNLLCDTGRI--------------DEA-IVHYQN-----ALAADPSAFMV 539
Query: 374 WANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTR 408
+ NLA A L GD+ ++G L+KA + P + R
Sbjct: 540 YNNLATALTLKGDYEAAGDMLKKALAIHPGYATAR 574
>gi|333997725|ref|YP_004530337.1| hypothetical protein TREPR_2762 [Treponema primitia ZAS-2]
gi|333739048|gb|AEF84538.1| tetratricopeptide repeat protein [Treponema primitia ZAS-2]
Length = 183
Score = 52.0 bits (123), Expect = 8e-04, Method: Composition-based stats.
Identities = 39/170 (22%), Positives = 71/170 (41%), Gaps = 26/170 (15%)
Query: 252 NTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILK 311
N G+ L ++ R +I + L ++P N NLGIA ++GD E++ FQ +
Sbjct: 8 NDSGIALTEANRPYEAIPLFRKALIMEPENPLLWMNLGIAQQRTGDYEEALNSFQRAVFI 67
Query: 312 DQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAA 371
+ + A ++ G + ++++EC +AL D +
Sbjct: 68 NDDLTEAWVSM---------------------GLIYYEIEQFDLSEECYQSALVRDDSSP 106
Query: 372 HIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAER 421
W NL Y++ G + + C E+A + P Y A+ ++DA R
Sbjct: 107 KTWNNLGVLYFVEGSYEEARHCFEEAVSMAP-----MYYEALYNLRDACR 151
>gi|118379597|ref|XP_001022964.1| TPR Domain containing protein [Tetrahymena thermophila]
gi|89304731|gb|EAS02719.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
Length = 2086
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 102/463 (22%), Positives = 176/463 (38%), Gaps = 98/463 (21%)
Query: 155 KNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPE 214
KN + LG M +L +K + EK ++I + DI + + A L P
Sbjct: 1556 KNYLPYLKLGWMQVKLS-NIKHQEALEKNKQIDSATKTDIQNTLKQGIDNLQKAHSLEPN 1614
Query: 215 SS------GDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSI 268
+ G+ L E + E +E +S L ++ D + LG + G LQ +I
Sbjct: 1615 NVEINIKLGEAYLMNEEDNEGADEAISYLTNALNLDDKNYDCLIGLGKAYERKGDLQKAI 1674
Query: 269 SVLSSLLAVD---PN-NCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAA 324
S LA+D PN N + I LG+ Y Q+ +++ + K F+ ++ K+ H ALI YA
Sbjct: 1675 QF--SQLAIDLPNPNPNLNSIFFLGMLYLQNKEIKNAEKQFKSVLSKNSEHVGALIEYAT 1732
Query: 325 LLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLA-NAYYL 383
L + + + AK+ ALK D ++ ANL Y
Sbjct: 1733 TLSLQ---------------------NKYDKAKKYFRHALKLDK--NNVIANLRLGKIYQ 1769
Query: 384 T--GDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRI--KDAERSQEP-------TEQLSWA 432
T D + C +K +++P Y + ++ + KD + + E E+ + A
Sbjct: 1770 TKLNDIDGAISCYKKIIEVQPKFAKAHYQLGLALLEKKDYKGATEEFKETIRINERFTGA 1829
Query: 433 GNEMASILREG----------------DPVQIEPPIAWA-------GFAAVQKTHHEVAA 469
+ I E DP +E + A F A + + E++
Sbjct: 1830 YKAIGLIYYENNNPSNACKYYLRALECDPFDMESKLGLANCYYLMENFDAAIQNYEEISG 1889
Query: 470 AFETEENELSKMEEC---AGAGESAFLDQASAVNVAKE---------------------- 504
+ +E E + + C G A +A+N+ ++
Sbjct: 1890 IDQNDEIEYN-LANCYYMKGEINEAINHYKNALNLKQDKPDCLYNLGNAYCIQENFKEAL 1948
Query: 505 -CLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKVLMV 546
C A++ DP+ + NLAN YY+ DH + EK + +
Sbjct: 1949 ICFEKAIQYDPQNSAAMYNLANTYYVLEDHEKASDYFEKAIQL 1991
Score = 46.6 bits (109), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 83/201 (41%), Gaps = 28/201 (13%)
Query: 225 LEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDC 284
LE ++ + + KE+++ + R + +GLI ++ ++ L DP D
Sbjct: 1804 LEKKDYKGATEEFKETIRINERFTGAYKAIGLIYYENNNPSNACKYYLRALECDP--FDM 1861
Query: 285 IGNLGIA--YFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKY--GSVLAGAG-- 338
LG+A Y+ + + + + ++++ DQN I Y L C Y G +
Sbjct: 1862 ESKLGLANCYYLMENFDAAIQNYEEISGIDQNDE---IEYN-LANCYYMKGEINEAINHY 1917
Query: 339 --------------ANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLT 384
N G C+ + + C A++ DP+ + NLAN YY+
Sbjct: 1918 KNALNLKQDKPDCLYNLGNAYCIQENFKEALI--CFEKAIQYDPQNSAAMYNLANTYYVL 1975
Query: 385 GDHRSSGKCLEKAAKLEPNCM 405
DH + EKA +LEPN +
Sbjct: 1976 EDHEKASDYFEKAIQLEPNNI 1996
>gi|33866741|ref|NP_898300.1| TPR repeat-containing glycosyl transferase [Synechococcus sp. WH
8102]
gi|33639342|emb|CAE08724.1| Possible glycosyltransferase 2 fused to TPR-repeat domain
[Synechococcus sp. WH 8102]
Length = 400
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 48/94 (51%), Gaps = 2/94 (2%)
Query: 225 LEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDC 284
+E EL+E ++ + + Q A+ W LGL+L + G + +++ S + +DPNN C
Sbjct: 285 MEQGELDEAIALTQTATQRAPEVALGWYNLGLMLRRRGDIAAALEAYSRAVELDPNNAAC 344
Query: 285 IGNLGIAYFQSGDMEQSAKCFQDLI--LKDQNHP 316
N +A GD+E S F+ I L+ Q P
Sbjct: 345 HQNRAVALLLGGDIEGSRAAFRTAITLLETQGRP 378
>gi|410479980|ref|YP_006767617.1| hypothetical protein LFML04_2469 [Leptospirillum ferriphilum ML-04]
gi|406775232|gb|AFS54657.1| putative TPR domain-containing protein [Leptospirillum ferriphilum
ML-04]
Length = 315
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 235 SKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQ 294
S LKES+ S ++ V+ +T L +G L+ ++ +L+ LL DP N D + LG YF+
Sbjct: 98 SLLKESLTSMEKRDVLLHT-AFSLHGTGELRKAVRMLNELLDEDPLNTDALETLGKIYFE 156
Query: 295 SGDMEQSAKCFQDLILKDQNHP 316
G E++ + F +L D HP
Sbjct: 157 QGHFEEAERYFLELAEMDPAHP 178
>gi|150400257|ref|YP_001324024.1| hypothetical protein Mevan_1518 [Methanococcus vannielii SB]
gi|150012960|gb|ABR55412.1| TPR repeat-containing protein [Methanococcus vannielii SB]
Length = 375
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 50/261 (19%), Positives = 94/261 (36%), Gaps = 39/261 (14%)
Query: 288 LGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL 347
LG YF GD E++ KCF+ + ++N A G+G C
Sbjct: 132 LGYLYFDEGDYEKALKCFEKALTLNKNFEYAW---------------------NGKGLCY 170
Query: 348 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 407
++ ++A +C A +P+ W N+ Y+ ++ S C EKA ++ N
Sbjct: 171 EKKGKNDLAFKCFEKATFINPEYFDAWYNMGILSYIDQNYVFSLHCFEKAITIDDNNSKN 230
Query: 408 RYAVAVSRIKDAERSQEPTEQLSWAGNEMASILREGDPVQIEP--PIAW--AGFAAVQKT 463
+ A E L+ G ++ V++EP W G+
Sbjct: 231 YFYAA--------------ESLTSLGKYREAVFYFEKAVELEPNNSTFWNSKGYTHASLK 276
Query: 464 HHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKADPKAAHIWANL 523
+ A + +S ++ + + + A EC +L+ + + W L
Sbjct: 277 EYSTAKLCYEKSVGISPKDDISWSNLGYMNNNLEQCEEAVECFKKSLELNVNNKNAWNGL 336
Query: 524 ANAYYLTGDHRSSGKCLEKVL 544
N+Y L + + KC + +
Sbjct: 337 GNSYALLNNSEKALKCYDNAI 357
>gi|449107783|ref|ZP_21744430.1| hypothetical protein HMPREF9722_00126 [Treponema denticola ATCC
33520]
gi|448962734|gb|EMB43421.1| hypothetical protein HMPREF9722_00126 [Treponema denticola ATCC
33520]
Length = 992
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 65/163 (39%), Gaps = 21/163 (12%)
Query: 250 VWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLI 309
+ N +G+I + SI +L A+D N + NLG Y Q+GD + + +CF D++
Sbjct: 79 ILNNMGVIYRRLNMFNESIVILEKAKAIDSKNETTLYNLGNTYKQNGDYKHAIQCFTDVL 138
Query: 310 LKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPK 369
P + Y L GSV C D A+ K LK DP
Sbjct: 139 ---DIKPDDALAYNHL-----GSVYF---------LCKDYPKALETYK----IGLKVDPN 177
Query: 370 AAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVA 412
+ NLA Y ++ + + A K +PN A+A
Sbjct: 178 HPFLNFNLAELYKEERHYKEAINSYQTAIKTKPNWYEALAAIA 220
>gi|428309254|ref|YP_007120231.1| Flp pilus assembly protein TadD [Microcoleus sp. PCC 7113]
gi|428250866|gb|AFZ16825.1| Flp pilus assembly protein TadD [Microcoleus sp. PCC 7113]
Length = 325
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 94/232 (40%), Gaps = 27/232 (11%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
+L E ++ +++ Q + + A LGL L +SG+LQ+S VDPN NL
Sbjct: 82 KLPEAIAAFRQASQLNPQLAPAHYNLGLALRQSGQLQASADAFYQATQVDPNFALAFANL 141
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL---------LCKYGSVLAGAGA 339
G A + +++Q+ + + N A NY LL + ++ + L
Sbjct: 142 GAALLEGNNLQQARDYLTRALELEPNLGVAHYNYGLLLSQAGDQEQAIDQFKNALQ-VSP 200
Query: 340 NTGE-----GACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCL 394
N E G Q + AK+ ALK +PK A NL + + G+ ++
Sbjct: 201 NAPEPAYHIGLIYLQQGKIEDAKKLFQQALKINPKYAEAHYNLGSILFSQGNLDAALTAF 260
Query: 395 EKAAKLEPNCMSTRYAVAV-----SRIKDAERSQEPTEQL-------SWAGN 434
KAA+ N + Y + +R DA++ + + L WA N
Sbjct: 261 RKAAESNSNYPNAYYGAGLVFLRQNRFSDAQQVLQYAKMLYTVQGNSQWAAN 312
>gi|196011186|ref|XP_002115457.1| hypothetical protein TRIADDRAFT_59420 [Trichoplax adhaerens]
gi|190582228|gb|EDV22302.1| hypothetical protein TRIADDRAFT_59420 [Trichoplax adhaerens]
Length = 1106
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 99/438 (22%), Positives = 162/438 (36%), Gaps = 72/438 (16%)
Query: 135 REEKVS----SLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRC 190
EE +S SLK L + R P A ++ LG+ Y G+ +A+S YEK+ +I L
Sbjct: 489 HEEAISMYEKSLKIRLSVLGRYHPDVAKSYNNLGIAYNDQGKHEEALSMYEKSLKIQLSV 548
Query: 191 EADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQ--A 248
D P++ A+ S K E + E K++ S S A
Sbjct: 549 -FDHNHPDV--------AKSYNNMGSVYRHQGKHEEAISMYEKSLKIQLSAYSPNHPDVA 599
Query: 249 VVWNTLGLILLKSGRLQSSISVLS-----SLLAVDPNNCDC---IGNLGIAYFQSGDMEQ 300
+ +N LG++ G+ + +IS+ LL D N+ D N+G YF G E+
Sbjct: 600 ISYNNLGIVYNDQGKYEEAISMYKKSLKIQLLVYDHNHPDVAKSYSNIGEVYFNQGKHEE 659
Query: 301 SAKCFQD-----LILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNV 355
+ ++ L+ + NHP +Y L G+V G A+++
Sbjct: 660 AISMYEKSLEITLLEFNHNHPDVSASYNNL-----GNVYDDQGK---------YEEAISM 705
Query: 356 AKECLLAALKA----DPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRY-- 409
++ L L P A + NL N Y G H + EK+ K+ + +
Sbjct: 706 YEKSLKIRLSVFGHNHPDVAKSYNNLGNVYNSQGKHEEAISMYEKSIKIRLSVFGHDHSD 765
Query: 410 -AVAVSRIKDAERSQEPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFAAVQKTHHEVA 468
A + + I A +Q G +I ++I+ + V K+++ +
Sbjct: 766 VAGSYNNIGAAYSNQ---------GKHGEAISMYKKSLKIQLSVFGYNHPDVAKSYNNMG 816
Query: 469 AAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKADPKAAHIWANLANAYY 528
A+ + K EE E + Q S P A + NL N Y
Sbjct: 817 TAYSNQ----GKHEEAICMYEKSLKSQLSVFG----------HNHPDTAKSYNNLGNEYL 862
Query: 529 LTGDHRSSGKCLEKVLMV 546
G H + EK L +
Sbjct: 863 DQGKHEEAIALYEKSLKI 880
Score = 39.3 bits (90), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 75/338 (22%), Positives = 134/338 (39%), Gaps = 73/338 (21%)
Query: 135 REEKVS----SLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRC 190
EE +S SLK L + R P A ++ LG+MY G+ +A+S YEK+ +I L
Sbjct: 195 HEEAISMYEKSLKIRLSVLGRYHPDVAKSYNNLGIMYYNQGKHEEALSMYEKSLKIQLSV 254
Query: 191 EADIARPEL------LSLVQIHHAQCLLPESSGDNSLDKEL------EPE---------- 228
D P++ + V H + + SL +L P+
Sbjct: 255 -FDHNHPDVAKSYNNMGSVYRHQGKHEEAIFMYEKSLKIQLSVYSPNHPDVAKSYNNLGI 313
Query: 229 ------ELEEILSKLKESMQ--------SDTRQAVVWNTLGLILLKSGRLQSSISV---- 270
+ EE +S K+S++ + + +N +G G+ + +IS+
Sbjct: 314 VYNDQGKHEEAISMYKKSLKIQLSVYGHNHLDVSASYNNMGEAYSNQGKHEEAISMYEKS 373
Query: 271 ----LSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQ-----DLILKDQNHPAALIN 321
LS P+ N+G AYF G +E++ ++ L + NHP
Sbjct: 374 LKFQLSVFDHSHPDINKSYNNIGNAYFNLGKLEEAISMYKKSLKIQLSVFGHNHPD---- 429
Query: 322 YAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKA----DPKAAHIWANL 377
+ K + + A +N G+ A+++ K+ L A+ A P A + N+
Sbjct: 430 -----VAKLYNNMGAAHSNQGK-----HEEAISMYKKSLEIAISAYGHNHPNVASSYDNM 479
Query: 378 ANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSR 415
+A+ G H + EK+ K+ + + RY V++
Sbjct: 480 GSAFRHQGKHEEAISMYEKSLKIRLSVLG-RYHPDVAK 516
Score = 38.5 bits (88), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 91/441 (20%), Positives = 166/441 (37%), Gaps = 88/441 (19%)
Query: 141 SLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELL 200
SLK L+ P A ++ +G +Y G+ +A+S YEK+ EI L E + P++
Sbjct: 625 SLKIQLLVYDHNHPDVAKSYSNIGEVYFNQGKHEEAISMYEKSLEITL-LEFNHNHPDV- 682
Query: 201 SLVQIHHAQCLLPESSGDNSLDKELEPE-ELEEILSKLKESMQSDTRQAVV--------- 250
S+ N+L + + + EE +S ++S++ R +V
Sbjct: 683 --------------SASYNNLGNVYDDQGKYEEAISMYEKSLK--IRLSVFGHNHPDVAK 726
Query: 251 -WNTLGLILLKSGRLQSSISVLSSLLAV-----DPNNCDCIG---NLGIAYFQSGDMEQS 301
+N LG + G+ + +IS+ + + ++ D G N+G AY G ++
Sbjct: 727 SYNNLGNVYNSQGKHEEAISMYEKSIKIRLSVFGHDHSDVAGSYNNIGAAYSNQGKHGEA 786
Query: 302 AKCFQ-----DLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVA 356
++ L + NHP +Y + G+ + G + E C+ + S
Sbjct: 787 ISMYKKSLKIQLSVFGYNHPDVAKSYNNM-----GTAYSNQGKHE-EAICMYEKS----L 836
Query: 357 KECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLE--------PNCMSTR 408
K L P A + NL N Y G H + EK+ K++ PN
Sbjct: 837 KSQLSVFGHNHPDTAKSYNNLGNEYLDQGKHEEAIALYEKSLKIQLIIFDHNHPNV---- 892
Query: 409 YAVAVSRIKDAERSQEPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFAAVQKTHHEVA 468
A + + + A +Q E+ +I ++I+ + + K+++ +
Sbjct: 893 -ARSYNNMGAAYSNQGKHEE---------AIFMYKKSLKIQLSVFGHEHPDIAKSYNNIG 942
Query: 469 AAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKADPKAAHIWANLANAYY 528
AA+ + K EE E + + S + P A + N+ AY
Sbjct: 943 AAYSNQ----GKHEEAISMYEKSLKIKLSVFDY----------NHPDVAASYNNMGAAYS 988
Query: 529 LTGDHRSSGKCLEKVLMVYCS 549
G H + EK L + S
Sbjct: 989 NQGKHEEAISMYEKALKIRLS 1009
>gi|329850849|ref|ZP_08265694.1| tetratricopeptide repeat family protein [Asticcacaulis biprosthecum
C19]
gi|328841164|gb|EGF90735.1| tetratricopeptide repeat family protein [Asticcacaulis biprosthecum
C19]
Length = 612
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 78/188 (41%), Gaps = 26/188 (13%)
Query: 239 ESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDM 298
+++ D + A W+ L + K+G L+++I+ + L + P + +LG F+
Sbjct: 98 KALHVDEKSAQAWHVLAIAREKAGDLKTAITCFETALRISPEDAYIANDLGRLAFRLSLN 157
Query: 299 EQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKE 358
+ + K F + NHP A+ N A++L K N +GA E
Sbjct: 158 DLAQKFFLHFLASFPNHPEAMNNLASVLREK----------NDLDGAI-----------E 196
Query: 359 CLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRY-----AVAV 413
L A+ A P+ +W + GD ++G ++A K +P+ Y ++
Sbjct: 197 VLQTAIAAHPEDPQLWNAIGTVVNARGDTETAGVFYQEALKFDPDHCHGNYNYGNVLTSL 256
Query: 414 SRIKDAER 421
R +A R
Sbjct: 257 GRFDEARR 264
>gi|186686063|ref|YP_001869259.1| hypothetical protein Npun_R6026 [Nostoc punctiforme PCC 73102]
gi|186468515|gb|ACC84316.1| Tetratricopeptide TPR_4 [Nostoc punctiforme PCC 73102]
Length = 381
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/190 (21%), Positives = 76/190 (40%), Gaps = 21/190 (11%)
Query: 225 LEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDC 284
+E L+ L + E+++ + + + LGL+L + G+ ++I+ L +DP
Sbjct: 117 MEQNRLDVALQEYTEAIRINPNFSEAYYNLGLVLHRQGQKDAAITAYRQSLVIDPTKVAA 176
Query: 285 IGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEG 344
+ NLG+ ++ + ++ +Q I D ++ A N A
Sbjct: 177 LYNLGLVLYEQEQLPEAIAVYQQAINLDSSNANAYFNLA--------------------- 215
Query: 345 ACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNC 404
L Q A AL+ DP+ A + N+AN + G + +A +L P
Sbjct: 216 IALQQQGQTEQAIATYRQALQLDPQNATAYNNMANLLAIQGQASEAISVYRQAIRLNPKN 275
Query: 405 MSTRYAVAVS 414
S Y + V+
Sbjct: 276 ASAYYNLGVT 285
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 79/166 (47%), Gaps = 25/166 (15%)
Query: 234 LSKLKESMQSD-TRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAY 292
++ ++S+ D T+ A ++N LGL+L + +L +I+V + +D +N + NL IA
Sbjct: 160 ITAYRQSLVIDPTKVAALYN-LGLVLYEQEQLPEAIAVYQQAINLDSSNANAYFNLAIAL 218
Query: 293 FQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQAS- 351
Q G EQ+ ++ + D + A N A LL A QAS
Sbjct: 219 QQQGQTEQAIATYRQALQLDPQNATAYNNMANLL------------------AIQGQASE 260
Query: 352 AVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKA 397
A++V ++ A++ +PK A + NL Y GD + + L++A
Sbjct: 261 AISVYRQ----AIRLNPKNASAYYNLGVTLYNQGDIKKANGVLKRA 302
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 82/167 (49%), Gaps = 21/167 (12%)
Query: 151 RKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEI------------LLRCEADIARPE 198
R P + A++ LGL+ R GQ A+++Y ++ I L+ E + PE
Sbjct: 134 RINPNFSEAYYNLGLVLHRQGQKDAAITAYRQSLVIDPTKVAALYNLGLVLYEQE-QLPE 192
Query: 199 LLSLVQIHHAQCLLPESSGDNS---LDKELEPE-ELEEILSKLKESMQSDTRQAVVWNTL 254
+++ Q Q + +SS N+ L L+ + + E+ ++ ++++Q D + A +N +
Sbjct: 193 AIAVYQ----QAINLDSSNANAYFNLAIALQQQGQTEQAIATYRQALQLDPQNATAYNNM 248
Query: 255 GLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQS 301
+L G+ +ISV + ++P N NLG+ + GD++++
Sbjct: 249 ANLLAIQGQASEAISVYRQAIRLNPKNASAYYNLGVTLYNQGDIKKA 295
>gi|424866627|ref|ZP_18290459.1| Putative TPR-domain containing protein [Leptospirillum sp. Group II
'C75']
gi|124516587|gb|EAY58095.1| putative TPR-domain containing protein [Leptospirillum rubarum]
gi|387222716|gb|EIJ77135.1| Putative TPR-domain containing protein [Leptospirillum sp. Group II
'C75']
Length = 327
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 235 SKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQ 294
S LKES+ S ++ V+ +T L +G L+ ++ +L+ LL DP N D + LG YF+
Sbjct: 110 SLLKESLTSMEKRDVLLHT-AFSLHGTGELRKAVRMLNELLDEDPLNTDALETLGKIYFE 168
Query: 295 SGDMEQSAKCFQDLILKDQNHP 316
G E++ + F +L D HP
Sbjct: 169 QGHFEEAERYFLELAEMDPAHP 190
>gi|225849348|ref|YP_002729512.1| hypothetical protein SULAZ_1547 [Sulfurihydrogenibium azorense
Az-Fu1]
gi|225643614|gb|ACN98664.1| tetratricopeptide repeat domain protein [Sulfurihydrogenibium
azorense Az-Fu1]
Length = 556
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 96/449 (21%), Positives = 158/449 (35%), Gaps = 53/449 (11%)
Query: 128 LGTSSSSREEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEIL 187
L S +EE LK K + + Y + QP KA+S+ E+A +
Sbjct: 73 LAYSLGRKEEAFDILK----KYNEKFKNDPETYLFTAFFYSVIKQPEKAISTLEEAYKRF 128
Query: 188 LRCEADIAR--PELLSLVQIHHAQCLLPESSGDNSLDKE---------LEPEELEEILSK 236
E I+ L QI A+ LL + S D L L++
Sbjct: 129 PNNEKVISTLVDYYLENKQIDKARQLLEKLSTIKKDDPNVYFKLARIYLFENNLQKAEEY 188
Query: 237 LKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSG 296
LK++++ D W LG + + R +I + S+L +P N D + L Y
Sbjct: 189 LKQTLKIDKNFKPAWQILGELYKQQKRYDEAIKLYKSVLQDNPQNLDALNRLFQVYVDID 248
Query: 297 DMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGS---VLAGAGANTGE---------- 343
D E ++K +I + AL+ LL KY +L E
Sbjct: 249 DFENASKTIDKIITLNPKDNDALLK-KFLLYIKYDKAKEILEDLQKTVKENPDNLFAKFM 307
Query: 344 -GACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 402
G + + AKE + P + L Y ++ + K P
Sbjct: 308 LGMAYESLNDYKKAKEIYEELYQQQPDNQELVDRLTQVYVNLKEYDKALDVYNKLYTQNP 367
Query: 403 NCMSTRYAVAVSRIKDAERSQEPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFAAVQK 462
N R +A++ I+D GN ++ + +I+P A F ++
Sbjct: 368 N--DYRILLAMADIEDKR------------GNTQRALELVQEAEKIKPDDATVYF--LKA 411
Query: 463 THHEVAAAFETEENELSKMEECAGAGESA-------FLDQASAVNVAKECLLAALKADPK 515
+ + ++ E L K E A ++D+ V+ E + AL P
Sbjct: 412 IYLDKLKNWKEAEKALLKALELRPNYPDALNYLGYTYIDRDINVDKGIELVNKALSLAPD 471
Query: 516 AAHIWANLANAYYLTGDHRSSGKCLEKVL 544
+LA YY GD++ + + LEKVL
Sbjct: 472 NPAYLDSLAWGYYKKGDYKKAYEILEKVL 500
>gi|427739371|ref|YP_007058915.1| hypothetical protein Riv7116_6007 [Rivularia sp. PCC 7116]
gi|427374412|gb|AFY58368.1| tetratricopeptide repeat protein [Rivularia sp. PCC 7116]
Length = 471
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 71/182 (39%), Gaps = 21/182 (11%)
Query: 228 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 287
E EE L + ++ + + +W G+ L + G+LQ ++S L + + P+ +
Sbjct: 55 ENFEEALIDFERAITNSSHSHYIWYERGVSLFRLGKLQEALSSLDIAIEIQPDYLKALLL 114
Query: 288 LGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL 347
GI + +E + F+ +IL N+P A +G L
Sbjct: 115 QGIVMLEQKKLEPALISFEKIILIKPNYPKAWYE---------------------KGLTL 153
Query: 348 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 407
+ + A C A++ PK W + S+ C EKA ++EPN +T
Sbjct: 154 YELGQLEDALMCFDKAIQYKPKFDLAWYRKGITLFDLEQLESALICFEKAIEIEPNDANT 213
Query: 408 RY 409
Y
Sbjct: 214 WY 215
Score = 43.1 bits (100), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 58/294 (19%), Positives = 113/294 (38%), Gaps = 39/294 (13%)
Query: 139 VSSLKTGLVHVARKMPKNAHAHFLL---GLMYQRLGQPLKAVSSYEKAEEI--------- 186
+ + + L+ R + ++H+H++ G+ RLG+ +A+SS + A EI
Sbjct: 54 LENFEEALIDFERAITNSSHSHYIWYERGVSLFRLGKLQEALSSLDIAIEIQPDYLKALL 113
Query: 187 ---LLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQS 243
++ E P L+S +I + P++ + L E +LE+ L +++Q
Sbjct: 114 LQGIVMLEQKKLEPALISFEKIILIKPNYPKAWYEKGLTL-YELGQLEDALMCFDKAIQY 172
Query: 244 DTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAK 303
+ + W G+ L +L+S++ + ++PN+ + G ++ +E +
Sbjct: 173 KPKFDLAWYRKGITLFDLEQLESALICFEKAIEIEPNDANTWYEKGCTLWKMEKLEYAIF 232
Query: 304 CFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAA 363
CF I + NH L Y +G L A C A
Sbjct: 233 CFDKAI--EYNHDLNLAWY-------------------HKGIALFDLGNFESALTCFEKA 271
Query: 364 LKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP-NC-MSTRYAVAVSR 415
++ P + A Y G + + KL+P NC + R A+ +
Sbjct: 272 IQIQPDFSEALCRKAEILYSLGQLEDTIDTFNQVLKLDPQNCQVRNRLGTALGK 325
>gi|118375025|ref|XP_001020699.1| TPR Domain containing protein [Tetrahymena thermophila]
gi|89302466|gb|EAS00454.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
Length = 318
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 100/246 (40%), Gaps = 36/246 (14%)
Query: 190 CEADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPE--ELEEILSKLKESMQS--DT 245
C+ ++ +L+ I+H Q +L E+S ++EP+ E+ L ++ ES+ +
Sbjct: 15 CKFNLNVLKLIVFWGIYHQQNMLEEASQFYLKALQIEPKNHEIYGQLGRVYESLNNLEQA 74
Query: 246 RQ-------------AVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAY 292
RQ +V +N L + K L+ + + L + P C LG+ Y
Sbjct: 75 RQCYLNAINLNKFGPSVYYNDLATVYFKMNMLKEAKASYLKALEIFPEQPYCYNGLGLVY 134
Query: 293 FQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGA------- 345
Q ++QS +CFQ + N+ +A IN L Y L E A
Sbjct: 135 QQLSMLKQSKECFQKALEIYPNYVSAYINLGNLF---YQQNLLTEAKQQFEKALQLDPLD 191
Query: 346 --CLDQASAVNV-------AKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEK 396
CL + + AK+ L AL+ +P+ + NL Y + + +C K
Sbjct: 192 YKCLYNLGNIYIDMQMLEDAKQYFLKALEINPQYVNGHNNLGLVYIDMKMFQQAKQCFLK 251
Query: 397 AAKLEP 402
A +++P
Sbjct: 252 ALEIDP 257
>gi|45357839|ref|NP_987396.1| hypothetical protein MMP0276 [Methanococcus maripaludis S2]
gi|45047399|emb|CAF29832.1| Conserved hypothetical protein [Methanococcus maripaludis S2]
Length = 344
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 78/216 (36%), Gaps = 47/216 (21%)
Query: 234 LSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYF 293
L +S+ D+ + W G+ L R +I ++++ N D N G F
Sbjct: 113 LEMYDKSLNIDSENSEAWKNKGITLNNMQRYSEAIDCFDKSISINAKNSDVWYNKGETQF 172
Query: 294 QSGDMEQSAKCFQDLILKDQNHPAALI----------NYAALLLC--------------- 328
+ G+ E+S + +L D+ AL+ NY + + C
Sbjct: 173 KLGEYEKSIDSYNKALLIDEKMETALLGKGNSYLKLQNYESAIECFNTAETINPKSEYPP 232
Query: 329 ------------------KYGSVLAGAGANT----GEGACLDQASAVNVAKECLLAALKA 366
Y L +N+ +G CLD+ + A A++
Sbjct: 233 YYKADAYRDTENFEYALKYYDEALEINPSNSDILISKGICLDKMKNYSAAISNFDLAIQL 292
Query: 367 DPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 402
DPK IW N+Y D+ SS C +KA ++EP
Sbjct: 293 DPKNVQIWILKGNSYVGLKDYESSISCYKKALEIEP 328
Score = 45.4 bits (106), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 60/313 (19%), Positives = 112/313 (35%), Gaps = 31/313 (9%)
Query: 234 LSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYF 293
+S+ ++ + + A +W G LLK G S L +DP N + LG
Sbjct: 45 ISEYNLALLENPKSAEIWVNKGNSLLKLGIYGESTECFDKALLIDPENSEAFNGLGTVLS 104
Query: 294 QSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAV 353
++G+ +++ + + + D + A N +G L+
Sbjct: 105 KTGNYQKALEMYDKSLNIDSENSEAWKN---------------------KGITLNNMQRY 143
Query: 354 NVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAV 413
+ A +C ++ + K + +W N + G++ S KA ++ +
Sbjct: 144 SEAIDCFDKSISINAKNSDVWYNKGETQFKLGEYEKSIDSYNKALLIDEKMETALLGKGN 203
Query: 414 SRIKDAERSQEPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFAAVQKTHHEVAAAFET 473
S +K + + E + A +P PP A A + E A +
Sbjct: 204 SYLK-LQNYESAIECFNTA--------ETINPKSEYPPYYKAD-AYRDTENFEYALKYYD 253
Query: 474 EENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDH 533
E E++ + LD+ + A A++ DPK IW N+Y D+
Sbjct: 254 EALEINPSNSDILISKGICLDKMKNYSAAISNFDLAIQLDPKNVQIWILKGNSYVGLKDY 313
Query: 534 RSSGKCLEKVLMV 546
SS C +K L +
Sbjct: 314 ESSISCYKKALEI 326
>gi|78183920|ref|YP_376355.1| TPR repeat-containing protein [Synechococcus sp. CC9902]
gi|78168214|gb|ABB25311.1| TPR repeat [Synechococcus sp. CC9902]
Length = 400
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%)
Query: 225 LEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDC 284
+E ++L+E + + + Q A+ W LGL+L K G + S++ LA+DPNN C
Sbjct: 285 MEQDQLDEAIQLTQTATQRAPEVALGWYNLGLMLRKKGEIASALEAYGRSLALDPNNAAC 344
Query: 285 IGNLGIAYFQSGDMEQSAKCFQDLI 309
N +A GD+E + F+ I
Sbjct: 345 HQNHAVARLLGGDIEAARNGFRKAI 369
>gi|206603461|gb|EDZ39941.1| putative TPR domain-containing protein [Leptospirillum sp. Group II
'5-way CG']
Length = 327
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 235 SKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQ 294
S LKES+ S ++ V+ +T L +G L+ ++ +L+ LL DP N D + LG YF+
Sbjct: 110 SLLKESLTSMEKRDVLLHT-AFSLHGTGELRKAVRMLNELLDEDPLNTDALETLGKIYFE 168
Query: 295 SGDMEQSAKCFQDLILKDQNHP 316
G E++ + F +L D HP
Sbjct: 169 QGHFEEAERYFLELAEMDPAHP 190
>gi|218442020|ref|YP_002380349.1| hypothetical protein PCC7424_5131 [Cyanothece sp. PCC 7424]
gi|218174748|gb|ACK73481.1| TPR repeat-containing protein [Cyanothece sp. PCC 7424]
Length = 361
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 78/184 (42%), Gaps = 21/184 (11%)
Query: 234 LSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYF 293
+ L ++++ + + A ++ G + G + L+ + +DPN+ + N G+ Y
Sbjct: 168 MQDLNQAIRLNPKMAEAYSNRGNVRTTIGDTFGAFKDLNHAIGLDPNSAEAYNNRGVTYA 227
Query: 294 QSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAV 353
+ GD + K FQD N A L + G G E D A A+
Sbjct: 228 RVGDYQ---KAFQDF------------NQAIGLDPQLGLAYNNRGVMRREFG--DHAGAI 270
Query: 354 NVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAV 413
+ L AL+ DPK A + N + + G+HR + + ++A +L P+ + Y V
Sbjct: 271 ----QDLNQALRFDPKLAKAYNNRGDTHRELGNHREAIQDYDQAVRLIPDNPNIYYYRGV 326
Query: 414 SRIK 417
R +
Sbjct: 327 VRTQ 330
>gi|255594632|ref|XP_002536129.1| o-linked n-acetylglucosamine transferase, ogt, putative [Ricinus
communis]
gi|223520752|gb|EEF26254.1| o-linked n-acetylglucosamine transferase, ogt, putative [Ricinus
communis]
Length = 448
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 48/98 (48%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
+L+E ++ ++ ++ + A LG +L G+LQS++ + + PN D NL
Sbjct: 69 KLDEAMASYQQGLRIQPQDARGHFNLGTVLRDKGQLQSAVQSYERAIVLFPNYTDAYNNL 128
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL 326
G + GDM ++ + +Q + ++ HP A N L
Sbjct: 129 GETWRDQGDMTRAVQYYQQALQRNPQHPGANYNMGEFL 166
>gi|242065108|ref|XP_002453843.1| hypothetical protein SORBIDRAFT_04g019560 [Sorghum bicolor]
gi|241933674|gb|EES06819.1| hypothetical protein SORBIDRAFT_04g019560 [Sorghum bicolor]
Length = 1011
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 84/196 (42%), Gaps = 16/196 (8%)
Query: 238 KESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGD 297
+ ++Q+ A+ + L I + G+L +I + + DP + N+G A +G
Sbjct: 315 QRALQARPDYAMAYGNLATIYYEQGQLDMAIRCYNQAIVYDPQFVEAYNNMGNALKDAGR 374
Query: 298 MEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGA-------GANTGEGACLDQA 350
+E++ C++ + NHP AL N + + ++ + A A +G + L+
Sbjct: 375 VEEAINCYRSCLALQANHPQALTNLGNIYM-EWSMISAAASFYKAAISVTSGLSSPLNNL 433
Query: 351 SAV-----NVAK--ECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 403
+ + N A C L+ DP AA N N + G + + +AA + PN
Sbjct: 434 AVIYKQQGNYADAITCYTEVLRIDPTAADALVNRGNTFKEIGRVNEAIQDYVQAATIRPN 493
Query: 404 CMSTRYAVAVSRIKDA 419
M+ +A S KD+
Sbjct: 494 -MAEAHANLASAYKDS 508
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 72/169 (42%), Gaps = 21/169 (12%)
Query: 234 LSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYF 293
++K +E++ D + A + + + G + +I + + + PN CD NL AY
Sbjct: 141 IAKNEEALAIDPQFAECYGNMANAWKEKGDIDLAIRYYLTAIQLRPNFCDAWSNLASAYT 200
Query: 294 QSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAV 353
+ G + ++A+C + A IN L A +N G + +
Sbjct: 201 RKGRLNEAAQCCRQ---------ALAIN----------PRLVDAHSNLGN--LMKAQGFI 239
Query: 354 NVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 402
A C + AL+ DP A W+NLA + GD + ++A KL+P
Sbjct: 240 QEAYSCYIEALRIDPHFAIAWSNLAGLFMEAGDLDKALMYYKEAVKLKP 288
Score = 42.7 bits (99), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 60/292 (20%), Positives = 107/292 (36%), Gaps = 65/292 (22%)
Query: 254 LGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQ 313
LG I + I+ LA+DP +C GN+ A+ + GD++ + + + I
Sbjct: 127 LGAIYYQIRNYDMCIAKNEEALAIDPQFAECYGNMANAWKEKGDIDLAIRYYLTAIQLRP 186
Query: 314 NHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHI 373
N C S LA A G +N A +C AL +P+
Sbjct: 187 N------------FCDAWSNLASAYTRKGR---------LNEAAQCCRQALAINPRLVDA 225
Query: 374 WANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQEPTEQLSWAG 433
+NL N G + + C +A +++P+ +A+A S + AG
Sbjct: 226 HSNLGNLMKAQGFIQEAYSCYIEALRIDPH-----FAIAWSNLAGL---------FMEAG 271
Query: 434 NEMASILREGDPVQIEPPIAWAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFL 493
+ +++ + V+++P A A+ + N + G + A +
Sbjct: 272 DLDKALMYYKEAVKLKP---------------SFADAYLNQGNVYKAL----GMPQDAIM 312
Query: 494 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKVLM 545
C AL+A P A + NLA YY G + +C + ++
Sbjct: 313 -----------CYQRALQARPDYAMAYGNLATIYYEQGQLDMAIRCYNQAIV 353
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 73/321 (22%), Positives = 118/321 (36%), Gaps = 43/321 (13%)
Query: 251 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 310
W+ L + GRL + LA++P D NLG G ++++ C+ + +
Sbjct: 192 WSNLASAYTRKGRLNEAAQCCRQALAINPRLVDAHSNLGNLMKAQGFIQEAYSCYIEALR 251
Query: 311 KDQNHPAALINYAALL---------LCKYGSVL----AGAGANTGEGACLDQASAVNVAK 357
D + A N A L L Y + + A A +G A
Sbjct: 252 IDPHFAIAWSNLAGLFMEAGDLDKALMYYKEAVKLKPSFADAYLNQGNVYKALGMPQDAI 311
Query: 358 ECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIK 417
C AL+A P A + NLA YY G + +C +A +P + Y + +K
Sbjct: 312 MCYQRALQARPDYAMAYGNLATIYYEQGQLDMAIRCYNQAIVYDPQFVEA-YNNMGNALK 370
Query: 418 DAERSQEPTEQ----LSWAGNEMASILREGDPVQIEPPIAWAGFAAVQKTHHEVAAAFET 473
DA R +E L+ N ++ G+ + +E + A A+ K V + +
Sbjct: 371 DAGRVEEAINCYRSCLALQANHPQALTNLGN-IYMEWSMISAA-ASFYKAAISVTSGLSS 428
Query: 474 EENELSKMEECAGAGESAF--------LDQASA---------------VNVAKECLLAAL 510
N L+ + + G A +D +A VN A + + A
Sbjct: 429 PLNNLAVIYKQQGNYADAITCYTEVLRIDPTAADALVNRGNTFKEIGRVNEAIQDYVQAA 488
Query: 511 KADPKAAHIWANLANAYYLTG 531
P A ANLA+AY +G
Sbjct: 489 TIRPNMAEAHANLASAYKDSG 509
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 79/197 (40%), Gaps = 31/197 (15%)
Query: 236 KLKESMQSDTRQAVVWN--------TLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 287
+L E+ Q RQA+ N LG ++ G +Q + S L +DP+ N
Sbjct: 204 RLNEAAQC-CRQALAINPRLVDAHSNLGNLMKAQGFIQEAYSCYIEALRIDPHFAIAWSN 262
Query: 288 LGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL 347
L + ++GD++++ +++ + + A +N G+V G
Sbjct: 263 LAGLFMEAGDLDKALMYYKEAVKLKPSFADAYLN--------QGNVYKALGMPQD----- 309
Query: 348 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 407
A C AL+A P A + NLA YY G + +C +A +P +
Sbjct: 310 --------AIMCYQRALQARPDYAMAYGNLATIYYEQGQLDMAIRCYNQAIVYDPQFVEA 361
Query: 408 RYAVAVSRIKDAERSQE 424
Y + +KDA R +E
Sbjct: 362 -YNNMGNALKDAGRVEE 377
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 57/288 (19%), Positives = 104/288 (36%), Gaps = 86/288 (29%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELL----SLVQIHHAQ 209
P A A+ G +Y+ LG P A+ Y++A + ARP+ +L I++ Q
Sbjct: 288 PSFADAYLNQGNVYKALGMPQDAIMCYQRALQ---------ARPDYAMAYGNLATIYYEQ 338
Query: 210 CLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSIS 269
+L+ + +++ D + +N +G L +GR++ +I+
Sbjct: 339 ------------------GQLDMAIRCYNQAIVYDPQFVEAYNNMGNALKDAGRVEEAIN 380
Query: 270 VLSSLLAVDPNNCDCIGNLG----------------------------------IAYFQS 295
S LA+ N+ + NLG + Y Q
Sbjct: 381 CYRSCLALQANHPQALTNLGNIYMEWSMISAAASFYKAAISVTSGLSSPLNNLAVIYKQQ 440
Query: 296 GDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNV 355
G+ + C+ +++ D AL+N G + VN
Sbjct: 441 GNYADAITCYTEVLRIDPTAADALVN---------------------RGNTFKEIGRVNE 479
Query: 356 AKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 403
A + + A P A ANLA+AY +G ++ ++A +L P+
Sbjct: 480 AIQDYVQAATIRPNMAEAHANLASAYKDSGHVETAIVSYKQALRLRPD 527
>gi|163798112|ref|ZP_02192049.1| TPR repeat [alpha proteobacterium BAL199]
gi|159176603|gb|EDP61180.1| TPR repeat [alpha proteobacterium BAL199]
Length = 618
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 91/235 (38%), Gaps = 55/235 (23%)
Query: 254 LGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQ 313
LG I L G ++ ++ +A+ P + +GNLG+AY + ++ CF+ + +
Sbjct: 43 LGTIALGGGETARALELIGHAVAIAPTDGKTVGNLGVAYLAQNKLAEAEDCFRRALDLEP 102
Query: 314 NHPAALINYAALLLCK--------------------------YGSVLAGAG----ANTGE 343
PA N+A LL + G++LA G A
Sbjct: 103 GQPALHANFATALLARGDRATALKAQSRAVELAPDSAVQRYNLGNLLAATGQTAKAAEAY 162
Query: 344 GACLD-----------------QASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGD 386
GA LD QA ++ A+ L AL DP + AN A+ G
Sbjct: 163 GATLDIDPGHVGALNNLSVLHKQAGNLDEAEALLDEALLHDPMNPELLANHADILLQRGQ 222
Query: 387 HRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQEPTEQLSWAGNEMASILR 441
+ + + +AA L P + R A+ ++ +LS AG E+A+ +R
Sbjct: 223 GERALETMRRAAGLAPGQATLRLALGSMLLE--------LGRLSEAGQELAAAMR 269
>gi|21226280|ref|NP_632202.1| hypothetical protein MM_0178 [Methanosarcina mazei Go1]
gi|20904523|gb|AAM29874.1| conserved protein [Methanosarcina mazei Go1]
Length = 1711
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 92/217 (42%), Gaps = 17/217 (7%)
Query: 230 LEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLG 289
EE L L++S++ + +W GLILL +G+L+ +I + ++P+N C N+G
Sbjct: 318 FEEALGPLEKSLEKEPENYNLWLQKGLILLDTGKLEPAIDAFENAARLNPDNETCWMNMG 377
Query: 290 IAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAG------------- 336
A + E++ + F++ L+ + N ++L K G
Sbjct: 378 FALYSLERYEEALEAFKE-GLRLNPYLETGWNRKGIVLGKLGKTGEALEAFEEAIKLRPD 436
Query: 337 -AGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLE 395
A G L + A+E LK +P+ N + G ++ + LE
Sbjct: 437 FEDAWKNRGLLLFASEECEKAEEAFAEVLKINPEDIDSLYNRGISLLKLGRKETALEYLE 496
Query: 396 KAAKLEPNCMSTRYA--VAVSRIKDAERSQEPTEQLS 430
K L P+ Y+ VA++ + + E++ E E+L+
Sbjct: 497 KVVSLRPDYPDLSYSLGVALTELGEYEKALETFEKLA 533
Score = 38.9 bits (89), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 95/228 (41%), Gaps = 42/228 (18%)
Query: 120 DADGDQSGL--GTSSSSREEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAV 177
DAD + +G+ G + +E S+L+T V K P + A + G++ L + +A
Sbjct: 604 DADYEDAGVLKGFAQMKLKECASALET-FERVLEKKPDSDTAWYYRGMILYTLQRQEEAA 662
Query: 178 SSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKL 237
++E A + P L + + + A+CL + + E E +L K
Sbjct: 663 KAFESASRL---------NPGLYTAFE-YRAKCLFETGQYEAAF------EAFEAVLEKD 706
Query: 238 KESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL-------GI 290
E++ + ++A+ L LK + ++ LS+LL DP D L GI
Sbjct: 707 PENLSALEKRAIC-----LFELKKNK--EAVDALSTLLESDPERKDTKLRLEEAKLRLGI 759
Query: 291 AYFQSGDMEQSAKCFQDL---------ILKDQNHPAALINYAALLLCK 329
YF+ G E + + F+ + +D P +++ + L+ +
Sbjct: 760 EYFELGQYENALELFEGINEKAEGIYEKTRDPQKPNSVLYWKGLVFIR 807
>gi|40063048|gb|AAR37904.1| TPR domain protein [uncultured marine bacterium 560]
Length = 732
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 87/204 (42%), Gaps = 13/204 (6%)
Query: 213 PESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLS 272
P + NS+ +++E L ++ + + +++N G+ G+L ++
Sbjct: 6 PPQTEINSVITLYSSGQIQEALDTVETLTKDFPNEPLLYNISGVCYKTIGQLDVAVKSFE 65
Query: 273 SLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL------ 326
LA+ P+ + NLG+ + + G ++ + KC++D++ + H A N L
Sbjct: 66 KALAIKPDYTEVNYNLGLTFQELGQLDAAVKCYEDVLAVNPEHAEAHNNLGVTLKELEQL 125
Query: 327 ---LCKYGSVLA----GAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLAN 379
+ Y +A A A+ G L + ++VA + A+ P A NL N
Sbjct: 126 DAAVKSYEKAIAIKPDYAEAHNNLGNALKELGQLDVAVKSYEKAIAIKPDFAETHNNLGN 185
Query: 380 AYYLTGDHRSSGKCLEKAAKLEPN 403
A G + KC E+A ++P+
Sbjct: 186 ALQGLGQLDEAVKCYEQAIAIKPD 209
>gi|411118571|ref|ZP_11390952.1| methyltransferase, FkbM family [Oscillatoriales cyanobacterium
JSC-12]
gi|410712295|gb|EKQ69801.1| methyltransferase, FkbM family [Oscillatoriales cyanobacterium
JSC-12]
Length = 928
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/281 (19%), Positives = 117/281 (41%), Gaps = 52/281 (18%)
Query: 143 KTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEI---------------- 186
+T V P++ A F L L+ + G+P++A++ Y+K ++
Sbjct: 23 ETAYRQVVEDDPEHIEAWFWLALVTDQQGRPMEAIAHYQKVLQLQPNSAEAHGNLGSVWL 82
Query: 187 -LLRCEADIARPELLSLVQIHHAQC--LLPESSGD--NSLDKELEPEELEEILSKLKESM 241
L R + IA HH + L+P+++ N E +++E ++ ++++
Sbjct: 83 KLRRFDEAIA----------HHRKSVELMPQNAKAHYNLAIALYENNQVDEAITYYQQAV 132
Query: 242 QSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQS 301
A + LG+ L + G+ +I+ +A++PN+ +LG+A +Q G ++++
Sbjct: 133 ALMPEYANAHHNLGMALYRQGKADEAITHYQKAIALEPNHASARNSLGVALYQQGKIDEA 192
Query: 302 AKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLL 361
+ ++ I A L NY + A+ G L Q + A
Sbjct: 193 IEQYRQAI-------ATLPNYVS--------------AHDNLGIALKQQQKLEEAATHFQ 231
Query: 362 AALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 402
A+ P A+ + NL N G++ + ++ +L+P
Sbjct: 232 TAISLRPDYANAYINLGNTMRELGNYDQAIAYCRESIRLQP 272
Score = 39.3 bits (90), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 77/188 (40%), Gaps = 15/188 (7%)
Query: 153 MPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPEL-----------LS 201
MP+ A+AH LG+ R G+ +A++ Y+KA I L AR L +
Sbjct: 135 MPEYANAHHNLGMALYRQGKADEAITHYQKA--IALEPNHASARNSLGVALYQQGKIDEA 192
Query: 202 LVQIHHAQCLLPE--SSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILL 259
+ Q A LP S+ DN + ++LEE + + ++ A + LG +
Sbjct: 193 IEQYRQAIATLPNYVSAHDNLGIALKQQQKLEEAATHFQTAISLRPDYANAYINLGNTMR 252
Query: 260 KSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAAL 319
+ G +I+ + + P N D G G E++ C++ I + A
Sbjct: 253 ELGNYDQAIAYCRESIRLQPTNADAHNTYGCVLVDLGRFEEAIACYEAAIQHRPDFADAH 312
Query: 320 INYAALLL 327
+N +LL
Sbjct: 313 LNLGIILL 320
>gi|88603564|ref|YP_503742.1| hypothetical protein Mhun_2318 [Methanospirillum hungatei JF-1]
gi|88189026|gb|ABD42023.1| TPR repeat [Methanospirillum hungatei JF-1]
Length = 245
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 73/176 (41%), Gaps = 27/176 (15%)
Query: 231 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 290
+E + +E+++ + + W +G+ GR +I + +L +DP N + N G
Sbjct: 61 QEAVEAFEEALKLNDKDPRYWLYMGINYFFMGRYSKAIPCFNMVLEIDPTNLHALSNKGS 120
Query: 291 AYFQSGDMEQSAKCFQ---DLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL 347
A + ++S +CF +LI D N AL N L+
Sbjct: 121 ALAEIDRHQESVECFNRILELIPGDVN---ALFNKGISLM-----------------KLK 160
Query: 348 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 403
D SA+ KE LK D + + W L N T + + + KC ++ ++EPN
Sbjct: 161 DYKSAIGCFKE----ILKQDAEDSDAWFELGNCLSKTDNCKEAIKCFDRVIRIEPN 212
>gi|222423063|dbj|BAH19513.1| AT3G04240 [Arabidopsis thaliana]
Length = 750
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 109/264 (41%), Gaps = 38/264 (14%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 213
P A+ LG +Y+ LG+P +A+ Y+ A + +R + +A + S+
Sbjct: 254 PAFPDAYLNLGNVYKALGRPTEAIMCYQHALQ--MRPNSAMAFGNIASIY---------- 301
Query: 214 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 273
E +L+ + K+++ D R +N LG L GR+ ++ +
Sbjct: 302 -----------YEQGQLDLAIRHYKQALSRDPRFLEAYNNLGNALKDIGRVDEAVRCYNQ 350
Query: 274 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLI-----LKDQNHPAALI-----NYA 323
LA+ PN+ + NLG Y + M ++ F+ + L + A+I NY+
Sbjct: 351 CLALQPNHPQAMANLGNIYMEWNMMGPASSLFKATLAVTTGLSAPFNNLAIIYKQQGNYS 410
Query: 324 ALLLCKYGSVLA----GAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLAN 379
+ C Y VL A A G + V A + + A+ P A ANLA+
Sbjct: 411 DAISC-YNEVLRIDPLAADALVNRGNTYKEIGRVTEAIQDYMHAINFRPTMAEAHANLAS 469
Query: 380 AYYLTGDHRSSGKCLEKAAKLEPN 403
AY +G ++ ++A L P+
Sbjct: 470 AYKDSGHVEAAITSYKQALLLRPD 493
Score = 42.7 bits (99), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 74/175 (42%), Gaps = 21/175 (12%)
Query: 228 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 287
+E + +++ +E+++ + A + + + G +I + + PN D N
Sbjct: 101 QEYDMCIARNEEALRIQPQFAECYGNMANAWKEKGDTDRAIRYYLIAIELRPNFADAWSN 160
Query: 288 LGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL 347
L AY + G + ++ +C Q AL L +L A +N G +
Sbjct: 161 LASAYMRKGRLSEATQCCQQ----------------ALSL---NPLLVDAHSNLGN--LM 199
Query: 348 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 402
++ A C L A++ P A W+NLA + +GD + + ++A KL+P
Sbjct: 200 KAQGLIHEAYSCYLEAVRIQPTFAIAWSNLAGLFMESGDLNRALQYYKEAVKLKP 254
Score = 40.0 bits (92), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 36/174 (20%), Positives = 65/174 (37%), Gaps = 21/174 (12%)
Query: 230 LEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLG 289
+ E S E+++ A+ W+ L + ++SG L ++ + + P D NLG
Sbjct: 205 IHEAYSCYLEAVRIQPTFAIAWSNLAGLFMESGDLNRALQYYKEAVKLKPAFPDAYLNLG 264
Query: 290 IAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQ 349
Y G ++ C+Q + N A N A++ +
Sbjct: 265 NVYKALGRPTEAIMCYQHALQMRPNSAMAFGNIASIYY---------------------E 303
Query: 350 ASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 403
+++A AL DP+ + NL NA G + +C + L+PN
Sbjct: 304 QGQLDLAIRHYKQALSRDPRFLEAYNNLGNALKDIGRVDEAVRCYNQCLALQPN 357
>gi|167041835|gb|ABZ06576.1| putative TPR domain protein [uncultured marine microorganism
HF4000_097M14]
Length = 503
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/172 (21%), Positives = 79/172 (45%), Gaps = 23/172 (13%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 213
P A+AH+ LG+ ++ LG+ KA+ Y+KA +I P + H+ ++
Sbjct: 108 PNYANAHYNLGIAFKELGELKKAIHCYQKAIQI---------NP---NYANAHYNLGIVF 155
Query: 214 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 273
+ G EL++ + ++++Q + N LG++ + G L+ +I
Sbjct: 156 KELG-----------ELKKAIHCYQKAIQINPNHVAAHNNLGIVFKELGELKKAIHCYQK 204
Query: 274 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAAL 325
+ ++PN+ NLG+ ++ + +++ C++ I N+ A N +L
Sbjct: 205 AIQINPNHVAAHNNLGLVFYGLSECKKAIGCYKKAIQIQSNYSDAYWNLHSL 256
Score = 47.0 bits (110), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 34/163 (20%), Positives = 66/163 (40%), Gaps = 21/163 (12%)
Query: 241 MQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQ 300
+Q + N LG L + G + +I + ++PN + NLGIA+ + G++++
Sbjct: 70 IQINPNHVTAHNNLGAALKELGEQKKAIDCYQKAIQINPNYANAHYNLGIAFKELGELKK 129
Query: 301 SAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECL 360
+ C+Q I + N+ A A+ G + + A C
Sbjct: 130 AIHCYQKAIQINPNY---------------------ANAHYNLGIVFKELGELKKAIHCY 168
Query: 361 LAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 403
A++ +P NL + G+ + + C +KA ++ PN
Sbjct: 169 QKAIQINPNHVAAHNNLGIVFKELGELKKAIHCYQKAIQINPN 211
Score = 45.1 bits (105), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 33/166 (19%), Positives = 69/166 (41%), Gaps = 21/166 (12%)
Query: 238 KESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGD 297
++++Q + A LG+ + G L+ +I + ++PN + NLGI + + G+
Sbjct: 101 QKAIQINPNYANAHYNLGIAFKELGELKKAIHCYQKAIQINPNYANAHYNLGIVFKELGE 160
Query: 298 MEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAK 357
++++ C+Q I + NH A A+ G + + A
Sbjct: 161 LKKAIHCYQKAIQINPNHVA---------------------AHNNLGIVFKELGELKKAI 199
Query: 358 ECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 403
C A++ +P NL +Y + + + C +KA +++ N
Sbjct: 200 HCYQKAIQINPNHVAAHNNLGLVFYGLSECKKAIGCYKKAIQIQSN 245
Score = 39.3 bits (90), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 31/166 (18%), Positives = 67/166 (40%), Gaps = 21/166 (12%)
Query: 238 KESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGD 297
KE+++++ LG + ++ + ++ ++PN+ NLG A + G+
Sbjct: 33 KETLKTNPNHIETIFLLGSLSAQTNNFDKAKKFFKKVIQINPNHVTAHNNLGAALKELGE 92
Query: 298 MEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAK 357
+++ C+Q I + N+ A A+ G + + A
Sbjct: 93 QKKAIDCYQKAIQINPNY---------------------ANAHYNLGIAFKELGELKKAI 131
Query: 358 ECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 403
C A++ +P A+ NL + G+ + + C +KA ++ PN
Sbjct: 132 HCYQKAIQINPNYANAHYNLGIVFKELGELKKAIHCYQKAIQINPN 177
>gi|119484720|ref|ZP_01619202.1| TPR repeat protein [Lyngbya sp. PCC 8106]
gi|119457538|gb|EAW38662.1| TPR repeat protein [Lyngbya sp. PCC 8106]
Length = 335
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/195 (20%), Positives = 76/195 (38%), Gaps = 21/195 (10%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
+ E+ + LK +++ + ++N LGL + +SG + ++ + L +P N N
Sbjct: 86 KYEKAIKDLKIALKFNPTSDAIYNNLGLAIAQSGEYEDALKYYNKALLFNPKNHKTYHNR 145
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLD 348
G +++ G + + + F I N+ A IN G C
Sbjct: 146 GRSFYMGGRKQDAIQDFNKTIELSPNYTKAYIN---------------------RGLCHH 184
Query: 349 QASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTR 408
Q A E ALK D + + N YY + RS+ +A +L+P +
Sbjct: 185 QLGEHQAAIEDYNTALKIDAYNVYAYYNRGCVYYSLKEMRSAIDDFNQAIQLDPTYIKAY 244
Query: 409 YAVAVSRIKDAERSQ 423
++R K +++
Sbjct: 245 LNRGLARYKSGNQTE 259
>gi|343084159|ref|YP_004773454.1| hypothetical protein [Cyclobacterium marinum DSM 745]
gi|342352693|gb|AEL25223.1| Tetratricopeptide TPR_1 repeat-containing protein [Cyclobacterium
marinum DSM 745]
Length = 470
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 85/215 (39%), Gaps = 30/215 (13%)
Query: 230 LEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLG 289
+EIL+ +E + D A W LG++ + G+ + +I+ L +D NLG
Sbjct: 185 FDEILNFYQEFIDQDPYNANAWYNLGVVYNRLGKFEDAIAAYDYALLIDDTFSSAYFNLG 244
Query: 290 IAYFQSGDMEQSAKCFQDLI-------------------LKDQNHPAALINYAALLLCKY 330
A + E++ + + + I L + +A L +Y
Sbjct: 245 NALMNTNQYEKALEAYLNTINCEGSNAENCCYLAASYEKLDQIDMAFKYFKKSAKLDSEY 304
Query: 331 GSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSS 390
G G C+ + A A+K + A+ W LA+A Y G+ +SS
Sbjct: 305 DDAWFGL------GMCMIKKKKYFEAIHYFKKAIKLTAENANYWVGLADAEYELGNLQSS 358
Query: 391 GKCLEKAAKLEPNCMSTRYAVAV-----SRIKDAE 420
+ E+A LEP + T +++ +R ++AE
Sbjct: 359 SEAYEEAINLEPGILETYVNLSLIYFDQNRFEEAE 393
>gi|119487585|ref|ZP_01621195.1| TPR repeat protein [Lyngbya sp. PCC 8106]
gi|119455754|gb|EAW36890.1| TPR repeat protein [Lyngbya sp. PCC 8106]
Length = 1107
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 80/400 (20%), Positives = 153/400 (38%), Gaps = 68/400 (17%)
Query: 160 HFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESSGDN 219
+F G+ +Q G+ A++SY++A +I +A+I + L E+ N
Sbjct: 9 YFKTGIEFQEAGKWGSAIASYQQALQIAPH-QAEIYQK--------------LAEAFVLN 53
Query: 220 SLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDP 279
+LE + ++ ++ AV + ++G +L + +++ +I + L V P
Sbjct: 54 G--------QLEAGIKAIQTAVNLKPNFAVAYLSIGNVLQQQNQIELAIWAYTEALDVKP 105
Query: 280 NNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGA 339
+ NLG Y+ ++ +C+Q I D N +A+I +
Sbjct: 106 EFTEAQANLGSMYYHLQRFSEAIQCYQKAIYFDSN--SAIIYWML--------------- 148
Query: 340 NTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAK 399
G Q + A C A+ P + LA + G + + +
Sbjct: 149 ----GNAFSQTDQLEKAISCYQKAIDLQPNQVKFYLKLAAILDIQGKTIQAISYYQTILR 204
Query: 400 LEPNCMSTRYAV-AVSRIKDAERSQEPTEQLSWAGN----------EMASILREGDPVQI 448
L+P+C A+ ++++ D LS+ N ++AS L E +
Sbjct: 205 LQPDCSEAIVALRQLTQVDDPNNWANNLTGLSFVSNSREEFEEGGVDLASPLTEAIETEQ 264
Query: 449 EPPIAWAGFAAVQKTHHEVAAAFETEENEL----SKMEECAGAGESAFLDQASAVNVAKE 504
PI + + + E ET+ NEL S+ + C G+ A+ + ++
Sbjct: 265 HYPINHSQTDDIFVENAENITPLETKYNELKAYQSQAKFCVDQGQF-----EQAITICQQ 319
Query: 505 CLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKVL 544
ALK PK H + L NA + G ++ + +VL
Sbjct: 320 ----ALKIQPKFYHAYVILGNALHFQGKLEAAIRAYSQVL 355
Score = 42.7 bits (99), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 79/172 (45%), Gaps = 19/172 (11%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 213
P A H+ LG ++QRLG+ +++ S++ A EI EL +L+ Q
Sbjct: 393 PNFAVVHWNLGKIFQRLGRFEESIKSWKTALEIQPNLNGAKLHIELGNLL-TGQKQFKAA 451
Query: 214 ESSGDNSLDKELEPEELEEILS----------------KLKESMQSDTRQAVVWNTLGLI 257
SS +L E++P E+E L+ + +Q + + ++ +G
Sbjct: 452 ISSYQKAL--EIQPSEVEAHLNLGCLYSEQKQYETAIKTFQAGIQINPKNLDLYLNMGFA 509
Query: 258 LLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLI 309
L+K Q +I+ +LL + P+N + +LG Y +G ++Q+ + ++ I
Sbjct: 510 LVKLNHHQEAINCYQNLLNIQPDNKEAYASLGNIYANAGQVKQAIENYEQAI 561
>gi|196233636|ref|ZP_03132477.1| TPR repeat-containing protein [Chthoniobacter flavus Ellin428]
gi|196222306|gb|EDY16835.1| TPR repeat-containing protein [Chthoniobacter flavus Ellin428]
Length = 752
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 111/266 (41%), Gaps = 42/266 (15%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEIL-----------LRCEADIARPELLSL 202
P A AH LG + G+ +A++++++A E+ L +A R E L+
Sbjct: 105 PDYAQAHHNLGSALAKRGRFDEAIAAFQRAIELKPDYASAYNNLGLALKAQARRDEALAA 164
Query: 203 VQIHHAQCLLPESSG-----DNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLI 257
Q A L P+ + N + P+E ++ + +++ + A N LG+
Sbjct: 165 FQ--QAIALQPDHAEAHFNLGNIFREWARPQE---AMTAFRRALEINPDYADALNNLGIT 219
Query: 258 LLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPA 317
L +GRL +I+ L ++P + NLG A F+ ++++A F+
Sbjct: 220 LADAGRLDEAIACYRRALQINPAGAETNTNLGNALFELQRLDEAAAAFR----------- 268
Query: 318 ALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANL 377
A+I L Y ++ G L + A+N A L AL +P +A NL
Sbjct: 269 AVIELKPDLAQAYNNL----------GNALREQGALNEASAEFLHALAIEPNSADFHNNL 318
Query: 378 ANAYYLTGDHRSSGKCLEKAAKLEPN 403
NA G+ ++ +A +L P+
Sbjct: 319 GNALKDRGEIDAALDAYRRAMELAPD 344
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 107/263 (40%), Gaps = 36/263 (13%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLS-----------L 202
P++ AHF LG LG+ +A ++ +A E L+ + A L S +
Sbjct: 71 PQHVAAHFNLGNALSELGRMEEAADAFGRATE--LQPDYAQAHHNLGSALAKRGRFDEAI 128
Query: 203 VQIHHAQCLLPE-SSGDNSLDKELEPE-ELEEILSKLKESMQSDTRQAVVWNTLGLILLK 260
A L P+ +S N+L L+ + +E L+ ++++ A LG I +
Sbjct: 129 AAFQRAIELKPDYASAYNNLGLALKAQARRDEALAAFQQAIALQPDHAEAHFNLGNIFRE 188
Query: 261 SGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALI 320
R Q +++ L ++P+ D + NLGI +G ++++ C++ + Q +P
Sbjct: 189 WARPQEAMTAFRRALEINPDYADALNNLGITLADAGRLDEAIACYRRAL---QINP---- 241
Query: 321 NYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANA 380
AGA NT G L + ++ A A ++ P A + NL NA
Sbjct: 242 --------------AGAETNTNLGNALFELQRLDEAAAAFRAVIELKPDLAQAYNNLGNA 287
Query: 381 YYLTGDHRSSGKCLEKAAKLEPN 403
G + A +EPN
Sbjct: 288 LREQGALNEASAEFLHALAIEPN 310
>gi|428218502|ref|YP_007102967.1| hypothetical protein Pse7367_2276 [Pseudanabaena sp. PCC 7367]
gi|427990284|gb|AFY70539.1| Tetratricopeptide TPR_1 repeat-containing protein [Pseudanabaena
sp. PCC 7367]
Length = 418
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 74/181 (40%), Gaps = 15/181 (8%)
Query: 254 LGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQ 313
LGL ++G+LQ +I+ +DP NLG A Q G+ +Q+ FQ I
Sbjct: 201 LGLAFAQTGQLQEAINAFFRAAELDPTFPMTFSNLGAALLQGGNPQQAVAYFQRAIELKP 260
Query: 314 NHPAALINYAALLLCKYGSVLAGAGA--------------NTGEGACLDQASAVNVAKEC 359
+ P A N + + G + + N G + ++ ++ A +
Sbjct: 261 DLPIAHYNL-GIAYKEQGQITEAIASLREAQKLYPQSPETNYNLGLLVQESGDLDEAIKL 319
Query: 360 LLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDA 419
AAL+ +P A NL A+ L + L+KA +L PN + + V+R K
Sbjct: 320 YQAALEINPNYAQARYNLGAAFLLQEKMDQAIAELQKATQLRPNYADAFFTLGVARAKQG 379
Query: 420 E 420
+
Sbjct: 380 Q 380
>gi|145552589|ref|XP_001461970.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124429807|emb|CAK94597.1| unnamed protein product [Paramecium tetraurelia]
Length = 310
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 107/277 (38%), Gaps = 36/277 (12%)
Query: 146 LVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQI 205
L+ A ++ + + H G++ Q+ Q KA+SSY+ A ++L P
Sbjct: 23 LLQKASQIKDSPYIHNAYGIIAQKQKQTDKAISSYQMALQLL---------PTF------ 67
Query: 206 HHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQ 265
QCL N +E E+ + L LK+++++D A N LG++ K +L+
Sbjct: 68 --PQCL------SNQATLLIETEKYSQALDLLKQALKTDQNNAEAHNNLGVLYYKQNKLE 119
Query: 266 SSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAAL 325
S + + + +N + N G+ + D Q+ +CF + I + A N
Sbjct: 120 LSQNEYMEAIKLKVHNPEAHSNQGVIFCAKQDYSQALQCFDEAIKLKNDFVKAYHNKGTT 179
Query: 326 LLCK---------YGSVLAGAGAN----TGEGACLDQASAVNVAKECLLAALKADPKAAH 372
L K Y + G + + L + A L A K P+ A
Sbjct: 180 LYEKENFKEAVEIYDKAIKGKTQDPETYYNKSIALQGLEQFDDALNALEQAYKLSPEMAL 239
Query: 373 IWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRY 409
++ Y G + K + A +L+PNC Y
Sbjct: 240 LYVEKGTLMYRKGKVDEAIKNYDLAIQLQPNCAEAYY 276
>gi|383791819|ref|YP_005476393.1| Tfp pilus assembly protein PilF [Spirochaeta africana DSM 8902]
gi|383108353|gb|AFG38686.1| Tfp pilus assembly protein PilF [Spirochaeta africana DSM 8902]
Length = 1107
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 74/183 (40%), Gaps = 26/183 (14%)
Query: 232 EILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIA 291
E + L+ ++ D + LG+ L+ GRL+ + L P D + NLGI
Sbjct: 157 EAVRMLEAGLEHDENHPTLRYNLGISQLELGRLEDARDSFVRALRSRPGWVDALNNLGIV 216
Query: 292 YFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL--LCKYGSVLAGAGANTGEGACLDQ 349
+ + E++ + F++++ + +P AL N A++L L KY
Sbjct: 217 LQRLEEYEEAQRVFEEILSIESENPRALNNIASILSHLGKY------------------- 257
Query: 350 ASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRY 409
A E L +L+ DP ANL T D R + L K + L P RY
Sbjct: 258 ----EEAGEYLRRSLRRDPSYRKAAANLGQVLART-DGRGYLEELRKLSALSPQNTDLRY 312
Query: 410 AVA 412
+A
Sbjct: 313 QLA 315
Score = 42.4 bits (98), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 73/177 (41%), Gaps = 27/177 (15%)
Query: 147 VHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIH 206
+ + + P + HAH +LG +Y + ++EKAE
Sbjct: 27 LELVEEYPYSWHAHMMLGTIYTQ-------QRAFEKAEN------------------SFR 61
Query: 207 HAQCLLPESS-GDNSLDKELEPEE-LEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRL 264
A L PE++ G N+L ++ LE L + ++ +A + LG IL +SG +
Sbjct: 62 TAIKLQPENAEGYNNLAVLYRHQDRLEHALELARTALSFAPERADILYNLGNILKRSGDI 121
Query: 265 QSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALIN 321
++ + S + DP NLG Y SG ++ + + + D+NHP N
Sbjct: 122 DAARAAYSDAIHRDPGFVMAYNNLGTLYEHSGQHPEAVRMLEAGLEHDENHPTLRYN 178
>gi|15229253|ref|NP_187074.1| putative UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase SEC [Arabidopsis
thaliana]
gi|75336082|sp|Q9M8Y0.1|SEC_ARATH RecName: Full=Probable UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase SEC; AltName:
Full=Protein SECRET AGENT
gi|6721161|gb|AAF26789.1|AC016829_13 putative O-linked GlcNAc transferase [Arabidopsis thaliana]
gi|18139887|gb|AAL60196.1|AF441079_1 O-linked N-acetyl glucosamine transferase [Arabidopsis thaliana]
gi|20259324|gb|AAM13988.1| putative O-linked GlcNAc transferase [Arabidopsis thaliana]
gi|21436429|gb|AAM51415.1| putative O-linked GlcNAc transferase [Arabidopsis thaliana]
gi|110742062|dbj|BAE98963.1| O-linked GlcNAc transferase like protein [Arabidopsis thaliana]
gi|332640535|gb|AEE74056.1| putative UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase SEC [Arabidopsis
thaliana]
Length = 977
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 109/264 (41%), Gaps = 38/264 (14%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 213
P A+ LG +Y+ LG+P +A+ Y+ A + +R + +A + S+
Sbjct: 254 PAFPDAYLNLGNVYKALGRPTEAIMCYQHALQ--MRPNSAMAFGNIASIY---------- 301
Query: 214 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 273
E +L+ + K+++ D R +N LG L GR+ ++ +
Sbjct: 302 -----------YEQGQLDLAIRHYKQALSRDPRFLEAYNNLGNALKDIGRVDEAVRCYNQ 350
Query: 274 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLI-----LKDQNHPAALI-----NYA 323
LA+ PN+ + NLG Y + M ++ F+ + L + A+I NY+
Sbjct: 351 CLALQPNHPQAMANLGNIYMEWNMMGPASSLFKATLAVTTGLSAPFNNLAIIYKQQGNYS 410
Query: 324 ALLLCKYGSVLA----GAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLAN 379
+ C Y VL A A G + V A + + A+ P A ANLA+
Sbjct: 411 DAISC-YNEVLRIDPLAADALVNRGNTYKEIGRVTEAIQDYMHAINFRPTMAEAHANLAS 469
Query: 380 AYYLTGDHRSSGKCLEKAAKLEPN 403
AY +G ++ ++A L P+
Sbjct: 470 AYKDSGHVEAAITSYKQALLLRPD 493
Score = 42.7 bits (99), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 74/175 (42%), Gaps = 21/175 (12%)
Query: 228 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 287
+E + +++ +E+++ + A + + + G +I + + PN D N
Sbjct: 101 QEYDMCIARNEEALRIQPQFAECYGNMANAWKEKGDTDRAIRYYLIAIELRPNFADAWSN 160
Query: 288 LGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL 347
L AY + G + ++ +C Q AL L +L A +N G +
Sbjct: 161 LASAYMRKGRLSEATQCCQQ----------------ALSL---NPLLVDAHSNLGN--LM 199
Query: 348 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 402
++ A C L A++ P A W+NLA + +GD + + ++A KL+P
Sbjct: 200 KAQGLIHEAYSCYLEAVRIQPTFAIAWSNLAGLFMESGDLNRALQYYKEAVKLKP 254
Score = 40.0 bits (92), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 36/174 (20%), Positives = 65/174 (37%), Gaps = 21/174 (12%)
Query: 230 LEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLG 289
+ E S E+++ A+ W+ L + ++SG L ++ + + P D NLG
Sbjct: 205 IHEAYSCYLEAVRIQPTFAIAWSNLAGLFMESGDLNRALQYYKEAVKLKPAFPDAYLNLG 264
Query: 290 IAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQ 349
Y G ++ C+Q + N A N A++ +
Sbjct: 265 NVYKALGRPTEAIMCYQHALQMRPNSAMAFGNIASIYY---------------------E 303
Query: 350 ASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 403
+++A AL DP+ + NL NA G + +C + L+PN
Sbjct: 304 QGQLDLAIRHYKQALSRDPRFLEAYNNLGNALKDIGRVDEAVRCYNQCLALQPN 357
>gi|334121332|ref|ZP_08495403.1| Tetratricopeptide TPR_1 repeat-containing protein [Microcoleus
vaginatus FGP-2]
gi|333455148|gb|EGK83806.1| Tetratricopeptide TPR_1 repeat-containing protein [Microcoleus
vaginatus FGP-2]
Length = 1075
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 108/267 (40%), Gaps = 48/267 (17%)
Query: 232 EILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIA 291
E ++ +++++ D ++ + W+ LG+ L GR +I+ L +DP LGI
Sbjct: 234 EAIAAFEKALEIDPKEHIAWHGLGITLNALGRNSEAIAAFEKALEIDPKEHIAWHGLGIT 293
Query: 292 YFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQAS 351
G ++ F+ + D P A I + L G+ L G N+ A +
Sbjct: 294 LNALGRNSEAIAAFEKALEID---PKAHIAWKGL-----GNALNALGRNSEAIAAFKK-- 343
Query: 352 AVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP--------- 402
AL+ DPK H W L G + + EKA +++P
Sbjct: 344 -----------ALEIDPKFHHAWNGLGAPLNDLGRYSEAIAAFEKALEIDPKFHFAWHGL 392
Query: 403 -NCMST--RYAVAVSRIKDAERSQEPTEQLSW--AGNEMASILREGDPV-------QIEP 450
N ++ RY+ A++ + + +P +W GN + + R + + +I+P
Sbjct: 393 GNVLNALGRYSEAIA-VYEKALEIDPKFHFAWNGLGNALGELGRYSEAIAAYEKALEIDP 451
Query: 451 P--IAWAGFAAVQK---THHEVAAAFE 472
IAW G + ++ + E AAF+
Sbjct: 452 KFHIAWNGLGSARRGLGRNSEAIAAFD 478
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 75/359 (20%), Positives = 126/359 (35%), Gaps = 70/359 (19%)
Query: 230 LEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLG 289
L+ ++ +++++ D + WN LG L GR +I+ L +DP LG
Sbjct: 198 LKGAIAAFEKALEIDPKFHHAWNGLGAPLNDLGRNSEAIAAFEKALEIDPKEHIAWHGLG 257
Query: 290 IAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQ 349
I G ++ F+ + D P I + L G L G N+ A ++
Sbjct: 258 ITLNALGRNSEAIAAFEKALEID---PKEHIAWHGL-----GITLNALGRNSEAIAAFEK 309
Query: 350 ASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST-- 407
AL+ DPKA W L NA G + + +KA +++P
Sbjct: 310 -------------ALEIDPKAHIAWKGLGNALNALGRNSEAIAAFKKALEIDPKFHHAWN 356
Query: 408 ----------RYAVAVSRIKDAERSQEPTEQLSW--AGNEMASILREGDPV-------QI 448
RY+ A++ + A +P +W GN + ++ R + + +I
Sbjct: 357 GLGAPLNDLGRYSEAIAAFEKA-LEIDPKFHFAWHGLGNVLNALGRYSEAIAVYEKALEI 415
Query: 449 EPP--IAWAGF--------------AAVQKTHHEVAAAFETEENELSKMEECAGAGESAF 492
+P AW G AA +K E+ F N L G A
Sbjct: 416 DPKFHFAWNGLGNALGELGRYSEAIAAYEKA-LEIDPKFHIAWNGLGSARRGLGRNSEAI 474
Query: 493 LDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKVLMVYCSSN 551
A+ + A WAN +A + G + + + ++ L Y SN
Sbjct: 475 AAFDKALEITGNQFWQA----------WANRGSALFYLGRYSEAIQNWDEGLQKYQPSN 523
>gi|116621110|ref|YP_823266.1| hypothetical protein Acid_1991 [Candidatus Solibacter usitatus
Ellin6076]
gi|116224272|gb|ABJ82981.1| Tetratricopeptide TPR_2 repeat protein [Candidatus Solibacter
usitatus Ellin6076]
Length = 399
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 35/61 (57%)
Query: 252 NTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILK 311
N LG +L+ SGR ++ +LA DP N N G AY Q D++++A F+++I +
Sbjct: 189 NNLGFVLVNSGRADEGLAQFEKILAADPANNMARVNAGFAYLQKADLDRAAVEFREVIRR 248
Query: 312 D 312
D
Sbjct: 249 D 249
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 106/260 (40%), Gaps = 38/260 (14%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQC--- 210
PK++ A LGL QR G A+++Y +A + A++ L V ++ +
Sbjct: 148 PKSSEAWNQLGLSRQRTGDTAGAINAYRRAVTL---SPANLDARNNLGFVLVNSGRADEG 204
Query: 211 ------LLPESSGDNSLDKE-----LEPEELEEILSKLKESMQSDTRQAVVWNTLGLILL 259
+L +N L+ +L+ + +E ++ D A+ LG+ L
Sbjct: 205 LAQFEKILAADPANNMARVNAGFAYLQKADLDRAAVEFREVIRRDPESAIAHYDLGIALK 264
Query: 260 KSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAAL 319
+ L+++ L+ L +DP + LGI ++QSGD +Q+A+ + I
Sbjct: 265 QKDDLEAAKLELALALKLDPQLAEAHYTLGIIHWQSGDFDQAAREMRAAI---------A 315
Query: 320 INYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLAN 379
IN A YG GA G L Q + A+ L AA++ DP + LA
Sbjct: 316 INPA------YG------GAYFMLGTALKQNGELEAAETALRAAIRYDPANPGPYNTLAQ 363
Query: 380 AYYLTGDHRSSGKCLEKAAK 399
GD S ++ AK
Sbjct: 364 LLRQKGDLEGSRAVFQEGAK 383
>gi|224144666|ref|XP_002325368.1| predicted protein [Populus trichocarpa]
gi|222862243|gb|EEE99749.1| predicted protein [Populus trichocarpa]
Length = 873
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 106/264 (40%), Gaps = 38/264 (14%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 213
PK A+ LG +Y+ LG P +A+ Y++A + RP + C
Sbjct: 150 PKFPDAYLNLGNVYKALGMPQEAIMCYQRAVQ---------TRPNYAMAFGNLASTCY-- 198
Query: 214 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 273
E ++E + K+++ D R +N LG L GR+ ++ +
Sbjct: 199 ------------ERGQVELAILHYKQAIACDQRFLEAYNNLGNALKDVGRVDEALQCYNQ 246
Query: 274 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLI-----LKDQNHPAALI-----NYA 323
L++ PN+ + NLG Y + +A C++ + L + A+I NY+
Sbjct: 247 CLSIQPNHPQALTNLGNIYMEWNMSAAAASCYKATLAVTTGLSAPFNNLAVIYKQQGNYS 306
Query: 324 ALLLCKYGSVL----AGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLAN 379
+ C Y VL A G + V+ A + + A+ P A ANLA+
Sbjct: 307 DAISC-YNEVLRIEPMAADGLVNRGNTYKEIGRVSEAIQDYIHAINIRPTMAEAHANLAS 365
Query: 380 AYYLTGDHRSSGKCLEKAAKLEPN 403
AY +G ++ K +A L P+
Sbjct: 366 AYKDSGHVEAAIKSYRQALLLRPD 389
Score = 45.1 bits (105), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 72/169 (42%), Gaps = 21/169 (12%)
Query: 234 LSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYF 293
++K +E+++ R A + + + G + +I + + PN D NL AY
Sbjct: 3 IAKNEEALRLQPRFAECYGNMANAWKEKGDIDRAIRYYLVSIELRPNFADAWSNLASAYM 62
Query: 294 QSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAV 353
+ G + ++++C + AL L +L A +N G + V
Sbjct: 63 RKGRLNEASQCCRQ----------------ALAL---NPLLVDAHSNLGN--LMKAQGLV 101
Query: 354 NVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 402
A C L AL+ P A W+NLA + +GD + + ++A KL+P
Sbjct: 102 QEAYSCYLEALRIQPSFAIAWSNLAGLFMESGDLNRALQYYKEAVKLKP 150
Score = 40.4 bits (93), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 62/165 (37%), Gaps = 13/165 (7%)
Query: 230 LEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLG 289
++E S E+++ A+ W+ L + ++SG L ++ + + P D NLG
Sbjct: 101 VQEAYSCYLEALRIQPSFAIAWSNLAGLFMESGDLNRALQYYKEAVKLKPKFPDAYLNLG 160
Query: 290 IAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAA---------LLLCKYGSVLA----G 336
Y G +++ C+Q + N+ A N A+ L + Y +A
Sbjct: 161 NVYKALGMPQEAIMCYQRAVQTRPNYAMAFGNLASTCYERGQVELAILHYKQAIACDQRF 220
Query: 337 AGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAY 381
A G L V+ A +C L P NL N Y
Sbjct: 221 LEAYNNLGNALKDVGRVDEALQCYNQCLSIQPNHPQALTNLGNIY 265
>gi|338533149|ref|YP_004666483.1| hypothetical protein LILAB_17515 [Myxococcus fulvus HW-1]
gi|337259245|gb|AEI65405.1| TPR repeat-containing protein [Myxococcus fulvus HW-1]
Length = 1620
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 92/208 (44%), Gaps = 13/208 (6%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
+LEE +++L+++ D R + TLG +LL+ G L + S L L+ +P+N + + L
Sbjct: 1349 QLEEAVAELEKAKTEDPRSTTIPITLGAVLLERGDLPGAESNLGLALSNEPSNHEALYYL 1408
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL---------LCKYGSVL----A 335
+ + + Q+ + + + N P Y +L + + + +
Sbjct: 1409 ALVKAKRLEFTQALDNMRKAVERAPNRPDYHYAYGVILRDAKNLPDAMDSWRKTVELDAS 1468
Query: 336 GAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLE 395
A A+ G ++S + A A+LKADP+ + ++ +AY+ + K +
Sbjct: 1469 HADAHEALGHAQLESSQFDEAIASFEASLKADPRRTRVMGSIGDAYFAAARWNDAIKRYQ 1528
Query: 396 KAAKLEPNCMSTRYAVAVSRIKDAERSQ 423
A K +P Y VA + + A+ ++
Sbjct: 1529 SALKADPKLTYVYYKVARAFTEQAQHAK 1556
>gi|291234181|ref|XP_002737022.1| PREDICTED: P58IPK-like [Saccoglossus kowalevskii]
Length = 1148
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 51/90 (56%)
Query: 237 LKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSG 296
++S++ D++Q+ + + GL L G+++ SI V ++ L ++P DC +LG AY + G
Sbjct: 561 FQKSLELDSKQSEIMHFRGLALYHQGKIKDSIEVFNTTLKLEPLCVDCRRSLGHAYRELG 620
Query: 297 DMEQSAKCFQDLILKDQNHPAALINYAALL 326
D E S + F + ++H +L +LL
Sbjct: 621 DFETSMQHFNTALSLQEDHVQSLQLRGSLL 650
>gi|94271652|ref|ZP_01291989.1| TPR repeat:Tetratricopeptide TPR_4 [delta proteobacterium MLMS-1]
gi|93450385|gb|EAT01595.1| TPR repeat:Tetratricopeptide TPR_4 [delta proteobacterium MLMS-1]
Length = 249
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 72/173 (41%), Gaps = 21/173 (12%)
Query: 230 LEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLG 289
LE+ +++++ + W LG++L + GR + +I+ S + + P NL
Sbjct: 82 LEQAEGSYRQALRLNPELVAGWYNLGVVLRRQGRYEQAIAATSRAVKLAPELVAGWYNLA 141
Query: 290 IAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQ 349
+ + + GD + + ++ ++ D++ AA IN L A N G+ A
Sbjct: 142 VLHGKQGDQRREIETYRRVLELDEDFVAAWIN------------LGAAHGNAGQLAA--- 186
Query: 350 ASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 402
A E L A++ P+ A W L Y R + + + +L+P
Sbjct: 187 ------AVEALEKAVQLAPRRAQAWYTLGQLYAAADRQRDAKRAWRQLRQLDP 233
>gi|224123642|ref|XP_002319130.1| predicted protein [Populus trichocarpa]
gi|222857506|gb|EEE95053.1| predicted protein [Populus trichocarpa]
Length = 923
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 101/261 (38%), Gaps = 36/261 (13%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 213
PK A+ LG +Y+ LG P +A+ Y++A + ARP+
Sbjct: 203 PKFPDAYLNLGNVYKALGMPQEAIVCYQQAVQ---------ARPKY-------------- 239
Query: 214 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 273
+ N E +L+ + K+++ D R +N LG L GR+ +I +
Sbjct: 240 AMAFGNLASTYYERGQLDLAILHYKQAIACDQRFLEAYNNLGNALKDVGRVDEAIQCYNQ 299
Query: 274 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL------- 326
L++ PN+ + NLG Y + +A C++ + A N A +
Sbjct: 300 CLSLQPNHPQALTNLGNIYMEWNMSAAAASCYKATLAVTTGLSAPFSNLAVIYKQQGNYS 359
Query: 327 --LCKYGSVLA----GAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANA 380
+ Y VL A G + V+ A + + A+ P A ANLA+A
Sbjct: 360 DAISCYNEVLRIEPLAADGLVNRGNTYKEIGRVSEAIQDYINAITIRPNMAEAHANLASA 419
Query: 381 YYLTGDHRSSGKCLEKAAKLE 401
Y +G ++ K KA L
Sbjct: 420 YKDSGHVEAAIKSYRKALLLR 440
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 76/175 (43%), Gaps = 21/175 (12%)
Query: 228 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 287
++ + ++K +E+++ + R A + + + G + +I + + PN D N
Sbjct: 50 QDYDMCIAKNEEALRLEPRFAECYGNMANAWKEKGDIDLAIRYYLVSIELRPNFADAWSN 109
Query: 288 LGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL 347
L AY + G + ++++C + AL L + L A +N G +
Sbjct: 110 LASAYMRKGRLNEASQCCRQ----------------ALTLNPH---LVDAHSNLGN--LM 148
Query: 348 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 402
V A C L AL+ P A W+NLA + +GD + + ++A KL+P
Sbjct: 149 KAQGLVQEAYSCYLEALRIQPTFAIAWSNLAGLFMESGDLNRALQYYKEAVKLKP 203
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 112/277 (40%), Gaps = 37/277 (13%)
Query: 258 LLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPA 317
L KSG + ++ S + P D + LG Y+Q D + I K++
Sbjct: 12 LYKSGNYKQALEHSSVVYERSPQRTDNLLLLGAIYYQLQDYDMC-------IAKNEE--- 61
Query: 318 ALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANL 377
AL C YG+ +A A G+ +++A L +++ P A W+NL
Sbjct: 62 ALRLEPRFAEC-YGN-MANAWKEKGD---------IDLAIRYYLVSIELRPNFADAWSNL 110
Query: 378 ANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQEPTEQLSWAGNEMA 437
A+AY G + +C +A L P+ + A S + + ++Q + E
Sbjct: 111 ASAYMRKGRLNEASQCCRQALTLNPHLVD-----AHSNLGNLMKAQGLVQ-------EAY 158
Query: 438 SILREGDPVQIEPPIAWAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQAS 497
S E +Q IAW+ A + ++ A + + E K++ +
Sbjct: 159 SCYLEALRIQPTFAIAWSNLAGLFMESGDLNRALQYYK-EAVKLKPKFPDAYLNLGNVYK 217
Query: 498 AVNVAKE---CLLAALKADPKAAHIWANLANAYYLTG 531
A+ + +E C A++A PK A + NLA+ YY G
Sbjct: 218 ALGMPQEAIVCYQQAVQARPKYAMAFGNLASTYYERG 254
Score = 39.3 bits (90), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 33/172 (19%), Positives = 68/172 (39%), Gaps = 21/172 (12%)
Query: 231 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 290
+E + ++++Q+ + A+ + L + G+L +I +A D + NLG
Sbjct: 223 QEAIVCYQQAVQARPKYAMAFGNLASTYYERGQLDLAILHYKQAIACDQRFLEAYNNLGN 282
Query: 291 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQA 350
A G ++++ +C+ + NHP AL N + + +
Sbjct: 283 ALKDVGRVDEAIQCYNQCLSLQPNHPQALTNLGNIYM---------------------EW 321
Query: 351 SAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 402
+ A C A L + ++NLA Y G++ + C + ++EP
Sbjct: 322 NMSAAAASCYKATLAVTTGLSAPFSNLAVIYKQQGNYSDAISCYNEVLRIEP 373
>gi|406980633|gb|EKE02207.1| hypothetical protein ACD_20C00411G0008 [uncultured bacterium]
Length = 598
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 96/250 (38%), Gaps = 35/250 (14%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 213
P NA L G++ ++G AVS KA E+ P+ C
Sbjct: 35 PNNAEVLHLFGILMNQIGDFDTAVSVILKAIEL---------NPQ-------DSYYC--- 75
Query: 214 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 273
S G+ DK E + L ++++ + R +N LG++ +I
Sbjct: 76 -SLGNACFDKGDEDAAINCYL----KTIELNPRNLDAYNNLGMVYTAKEMFDDAIICYQK 130
Query: 274 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSV 333
L ++ + NLG +F+ +EQ+ KC++ I + N+ A N G+
Sbjct: 131 ALEINSGYPEIYNNLGSVFFEVNKIEQAIKCYEKAIELNPNYTQAYFN--------IGNA 182
Query: 334 LAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKC 393
G N +D ++ A AL+ P A ++ NL Y+ G C
Sbjct: 183 YKG---NDNFVRKIDNPEHLDKAVSYYQKALELMPDFADVYINLGKVYFYKGYTDKELSC 239
Query: 394 LEKAAKLEPN 403
+KA +L+P+
Sbjct: 240 YQKALELKPD 249
>gi|410940062|ref|ZP_11371881.1| tetratricopeptide repeat protein [Leptospira noguchii str.
2006001870]
gi|410784843|gb|EKR73815.1| tetratricopeptide repeat protein [Leptospira noguchii str.
2006001870]
Length = 367
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 40/73 (54%)
Query: 237 LKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSG 296
K +++SD A+ + +LG + SG +S+I S L +DP+ D NLGI+Y+ G
Sbjct: 190 FKNAIKSDPGYALSYLSLGYLYDSSGNFKSAIRYYKSALKIDPDYPDIWNNLGISYYNDG 249
Query: 297 DMEQSAKCFQDLI 309
+E S F+ I
Sbjct: 250 QIENSISHFEKAI 262
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 44/94 (46%), Gaps = 1/94 (1%)
Query: 238 KESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGD 297
K +++ D +WN LG+ G++++SIS + ++P + NLG Y Q D
Sbjct: 225 KSALKIDPDYPDIWNNLGISYYNDGQIENSISHFEKAIQLNPTFAYPVNNLGFIYIQKDD 284
Query: 298 MEQSAKCFQDLILKDQNHPAAL-INYAALLLCKY 330
++ K F I + P L YA L +C Y
Sbjct: 285 FSEAKKYFLRSIELKPSEPFLLGETYAGLSICNY 318
>gi|182417314|ref|ZP_02948653.1| putative tetratricopeptide repeat domain containing protein
[Clostridium butyricum 5521]
gi|237667079|ref|ZP_04527063.1| tetratricopeptide repeat domain protein [Clostridium butyricum E4
str. BoNT E BL5262]
gi|182378822|gb|EDT76341.1| putative tetratricopeptide repeat domain containing protein
[Clostridium butyricum 5521]
gi|237655427|gb|EEP52983.1| tetratricopeptide repeat domain protein [Clostridium butyricum E4
str. BoNT E BL5262]
Length = 986
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 67/171 (39%), Gaps = 16/171 (9%)
Query: 255 GLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQN 314
G ++LK SI + + ++A D N D N GIA G++E++ KCF+ I D
Sbjct: 359 GFVMLKRENYIESIDLFNKVIARDDKNIDAYINKGIALKNVGNIEEAIKCFEKAIYLDDK 418
Query: 315 HPAALI-------------NYAALLLCKYGSVLAGAG---ANTGEGACLDQASAVNVAKE 358
A N +L C ++ + A + LD + A
Sbjct: 419 FAYAYFLKGTTLFENNCCENIKEILECINKAIELNSKYFEAYFNKAIILDSIERYSEAIS 478
Query: 359 CLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRY 409
L +L K ++ L Y D++ S +C +KA L+ N + Y
Sbjct: 479 ILKESLSFTDKKEQVYLQLGATYCHMNDNKKSIECFDKAISLDSNYVEAYY 529
Score = 42.0 bits (97), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 51/251 (20%), Positives = 96/251 (38%), Gaps = 31/251 (12%)
Query: 97 INKLGKCRSRISSKMDSALEFGVDADGDQSGL---GTSSSSREEKVSSLKTGLVHVARKM 153
++KLG+ + +F + D G+ G RE + S+ +AR
Sbjct: 329 LDKLGRVEESLK-----VFDFVIANDKSIEGIYCKGFVMLKRENYIESIDLFNKVIARD- 382
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 213
KN A+ G+ + +G +A+ +EKA + + A L + C
Sbjct: 383 DKNIDAYINKGIALKNVGNIEEAIKCFEKA----IYLDDKFAYAYFLKGTTLFENNCCEN 438
Query: 214 ESSGDNSLDKELE------------------PEELEEILSKLKESMQSDTRQAVVWNTLG 255
++K +E E E +S LKES+ ++ V+ LG
Sbjct: 439 IKEILECINKAIELNSKYFEAYFNKAIILDSIERYSEAISILKESLSFTDKKEQVYLQLG 498
Query: 256 LILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNH 315
+ SI +++D N + N GI F G++ ++ +CF ++I K+ +
Sbjct: 499 ATYCHMNDNKKSIECFDKAISLDSNYVEAYYNKGIILFSQGELNEALQCFNEIIEKNDKY 558
Query: 316 PAALINYAALL 326
+ A++L
Sbjct: 559 IEVYLERASVL 569
>gi|355571187|ref|ZP_09042439.1| Tetratricopeptide TPR_2 repeat-containing protein [Methanolinea
tarda NOBI-1]
gi|354825575|gb|EHF09797.1| Tetratricopeptide TPR_2 repeat-containing protein [Methanolinea
tarda NOBI-1]
Length = 336
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 84/217 (38%), Gaps = 17/217 (7%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
E L + ++Q D A WN G L + GR + ++ + ++ P N
Sbjct: 114 RFSEKLVCCERAIQLDPSNARAWNARGHTLGELGRFEDELTCTAIATSLRPRYVGAWVNR 173
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSV--------------- 333
G A+ + ++ +CF + +A I + C+ G
Sbjct: 174 GYAFLKLRRFGEALECFSRALSIYPGFSSAWI-LKGIASCELGRFRDAVSCFARAEESRP 232
Query: 334 LAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKC 393
L+GA +G L + A L ++ DP+ W L+N Y+LTG+ S +C
Sbjct: 233 LSGARNLYWKGLALSRTGMRKDAIRILEGVVREDPRHVDAWIELSNCYFLTGEIEESVRC 292
Query: 394 LEKAAKLEPNCMSTRYAVAVSRIKDAERSQEPTEQLS 430
A L+ + + AV+ +K+ R +E LS
Sbjct: 293 FMVAYGLDKESIRDCLSRAVTLLKEG-RKEEGLRSLS 328
Score = 39.3 bits (90), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 48/232 (20%), Positives = 74/232 (31%), Gaps = 35/232 (15%)
Query: 231 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 290
E+ L+ ++Q D W G L K GR + I LA+DP N + N G
Sbjct: 48 EDALALFSRALQEDPTYVPAWVASGFALGKLGRFREEIKACDQALALDPQNVEAWINRGF 107
Query: 291 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQA 350
A + + C + I D ++ A A G L +
Sbjct: 108 ALGKLLRFSEKLVCCERAIQLDPSN---------------------ARAWNARGHTLGEL 146
Query: 351 SAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP-------- 402
C A P+ W N A+ + +C +A + P
Sbjct: 147 GRFEDELTCTAIATSLRPRYVGAWVNRGYAFLKLRRFGEALECFSRALSIYPGFSSAWIL 206
Query: 403 ----NCMSTRYAVAVSRIKDAERSQ--EPTEQLSWAGNEMASILREGDPVQI 448
+C R+ AVS AE S+ L W G ++ D ++I
Sbjct: 207 KGIASCELGRFRDAVSCFARAEESRPLSGARNLYWKGLALSRTGMRKDAIRI 258
>gi|428319215|ref|YP_007117097.1| glycosyl transferase group 1 [Oscillatoria nigro-viridis PCC 7112]
gi|428242895|gb|AFZ08681.1| glycosyl transferase group 1 [Oscillatoria nigro-viridis PCC 7112]
Length = 3281
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 82/199 (41%), Gaps = 15/199 (7%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
+L E + + +++ D A N LG++L G + ++S +A++P + NL
Sbjct: 1924 DLAEAAAYYQRAIEIDPNCAQAHNNLGILLQDRGNIPDAVSCFQKAIALNPIYVKALNNL 1983
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCK---------YGSVLAG--- 336
G Q GD+ + CF + + N+ AL+N + + Y +
Sbjct: 1984 GTILQQQGDLPTAIACFHQALSVNSNYVPALVNLGVAMQAQSQLDEAQRLYERAIEAEPN 2043
Query: 337 --AGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCL 394
AG CL A + A L A+ +P NL +A+ GD + C
Sbjct: 2044 DPAGHYHLGTLCLG-AGKIEQAISSLERAISLNPNYIEAITNLGSAFEQAGDINRAIVCY 2102
Query: 395 EKAAKLEPNCMSTRYAVAV 413
KA +++ +C+ + +++
Sbjct: 2103 NKALEIDADCVKAHFNLSL 2121
Score = 45.1 bits (105), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 44/74 (59%)
Query: 254 LGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQ 313
LG + L +G+++ +IS L ++++PN + I NLG A+ Q+GD+ ++ C+ + D
Sbjct: 2051 LGTLCLGAGKIEQAISSLERAISLNPNYIEAITNLGSAFEQAGDINRAIVCYNKALEIDA 2110
Query: 314 NHPAALINYAALLL 327
+ A N + +LL
Sbjct: 2111 DCVKAHFNLSLVLL 2124
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 77/181 (42%), Gaps = 28/181 (15%)
Query: 244 DTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAK 303
D A + LG++ +SG+L +I+ LA+D N + NLG A ++G+ E++
Sbjct: 1235 DPNYAAAHSNLGVVKQQSGQLTEAIAHYRQALAIDRNLAETASNLGSALAEAGETEEAIA 1294
Query: 304 CFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAA 363
++ + + N P ALIN G ++ V A C A
Sbjct: 1295 EYERALSLNPNCPEALINL---------------------GLLREEQGDVAEAISCYEQA 1333
Query: 364 LKADPKAAHIWANLANAYYLTGDHRSSG-------KCLEKAAKLEPNCMSTRYAVAVSRI 416
++ +P A + NL A G+ ++G E+A +EPN + + +A + I
Sbjct: 1334 IQVNPNCAAAYLNLGIALEEQGEEAAAGANYERAIANYERAIAIEPNYLDALHNLAYASI 1393
Query: 417 K 417
+
Sbjct: 1394 R 1394
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 45/82 (54%)
Query: 228 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 287
++L+E L+ ++++Q A LG++L K G+++ +I L++ P+ + N
Sbjct: 1430 DKLDEALAFCQQAIQKLPASAQAHCNLGIVLQKQGKIEDAIGCYQQALSLKPDFPQALNN 1489
Query: 288 LGIAYFQSGDMEQSAKCFQDLI 309
LG A+ ++G M ++ C+ I
Sbjct: 1490 LGQAFEEAGKMAEAIDCYHRAI 1511
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 81/184 (44%), Gaps = 14/184 (7%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
+L E ++ ++++ D A + LG L ++G + +I+ L+++PN + + NL
Sbjct: 1254 QLTEAIAHYRQALAIDRNLAETASNLGSALAEAGETEEAIAEYERALSLNPNCPEALINL 1313
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLD 348
G+ + GD+ ++ C++ I + N AA +N G L G GA +
Sbjct: 1314 GLLREEQGDVAEAISCYEQAIQVNPNCAAAYLN--------LGIALEEQGEEAAAGANYE 1365
Query: 349 QASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTR 408
+A A N + A+ +P NLA A G + ++A L+P+ T
Sbjct: 1366 RAIA-NYER-----AIAIEPNYLDALHNLAYASIRQGRVADAIAYYDRALALQPDLAETD 1419
Query: 409 YAVA 412
A+
Sbjct: 1420 LALG 1423
Score = 39.3 bits (90), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 37/175 (21%), Positives = 67/175 (38%), Gaps = 21/175 (12%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
E++ + + ++Q D+ + LG + + +L +I+ L V+PN + L
Sbjct: 133 EIDAAILYYQTALQLDSNLHETAHNLGHLYKQKNQLNEAIAYYLHALKVNPNLTYSLMGL 192
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLD 348
G Q G ++ C+Q + D N+P A+ GA
Sbjct: 193 GTVLQQQGKFAEAFNCYQQAVKLDPNNPE---------------------AHNNVGAFFH 231
Query: 349 QASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 403
+ VA ALK P NL +A G+ + + C +A +L+P+
Sbjct: 232 EQGNAKVAISHYRQALKLKPDFVEAINNLGHALVDLGEFQEAFSCHIRALELQPD 286
Score = 39.3 bits (90), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 61/283 (21%), Positives = 98/283 (34%), Gaps = 41/283 (14%)
Query: 255 GLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQN 314
G +L GR +I+ + L PN+ + NL + Q+GD+ ++A +Q I D N
Sbjct: 1882 GNVLKAQGRFSEAIACFKNALVWQPNSIEAATNLAVTLHQTGDLAEAAAYYQRAIEIDPN 1941
Query: 315 HPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIW 374
C A A+ G L + A C A+ +P
Sbjct: 1942 -------------C--------AQAHNNLGILLQDRGNIPDAVSCFQKAIALNPIYVKAL 1980
Query: 375 ANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAV-----SRIKDAERSQEPTEQL 429
NL GD ++ C +A + N + + V S++ +A+R E +
Sbjct: 1981 NNLGTILQQQGDLPTAIACFHQALSVNSNYVPALVNLGVAMQAQSQLDEAQRLYE--RAI 2038
Query: 430 SWAGNEMASILREGDPVQIEPPIAWAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGE 489
N+ A G G +++ + A N + + A E
Sbjct: 2039 EAEPNDPAGHYHLGTLC--------LGAGKIEQAISSLERAISLNPNYIEAITNLGSAFE 2090
Query: 490 SAFLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGD 532
QA +N A C AL+ D NL+ LTGD
Sbjct: 2091 -----QAGDINRAIVCYNKALEIDADCVKAHFNLSLVLLLTGD 2128
Score = 38.9 bits (89), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 48/117 (41%), Gaps = 16/117 (13%)
Query: 246 RQAVVW--------NTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGD 297
+ A+VW L + L ++G L + + + +DPN NLGI G+
Sbjct: 1899 KNALVWQPNSIEAATNLAVTLHQTGDLAEAAAYYQRAIEIDPNCAQAHNNLGILLQDRGN 1958
Query: 298 MEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVN 354
+ + CFQ I + + AL N G++L G AC QA +VN
Sbjct: 1959 IPDAVSCFQKAIALNPIYVKALNN--------LGTILQQQGDLPTAIACFHQALSVN 2007
>gi|398340129|ref|ZP_10524832.1| hypothetical protein LkirsB1_12213 [Leptospira kirschneri serovar
Bim str. 1051]
Length = 345
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 42/78 (53%)
Query: 232 EILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIA 291
E + K +++SD ++ + +LG + SG +S+I S L +DP+ D NLGI+
Sbjct: 185 EAIHLFKNAIKSDPEYSLSYLSLGYLYDSSGNFKSAIRYYKSALKIDPDYPDVWNNLGIS 244
Query: 292 YFQSGDMEQSAKCFQDLI 309
Y+ G +E S F+ I
Sbjct: 245 YYNDGQIENSISHFEKAI 262
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 1/94 (1%)
Query: 238 KESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGD 297
K +++ D VWN LG+ G++++SIS + ++P + NLG Y Q D
Sbjct: 225 KSALKIDPDYPDVWNNLGISYYNDGQIENSISHFEKAIQLNPTFAYPVNNLGFIYIQKDD 284
Query: 298 MEQSAKCFQDLILKDQNHPAAL-INYAALLLCKY 330
+ K F I P L +A L +C Y
Sbjct: 285 FSDAKKYFLRSIELKPLEPFLLGETFAGLSICNY 318
>gi|289191717|ref|YP_003457658.1| TPR repeat-containing protein [Methanocaldococcus sp. FS406-22]
gi|288938167|gb|ADC68922.1| TPR repeat-containing protein [Methanocaldococcus sp. FS406-22]
Length = 308
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 78/174 (44%), Gaps = 23/174 (13%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 213
PK A+FL G + LG+ E+A+EI L+ + + +L + +A +
Sbjct: 70 PKYILANFLKGALLVSLGRL-------EEAKEIFLKL-YRLKKSDL----SVKYAIAFIL 117
Query: 214 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 273
+ G E + L L E ++ + A+ W G IL K G+L+ S+ +
Sbjct: 118 KKLG-----------EYDSALKILDEVLKKYPQSAIAWAEKGEILYKEGKLKKSLECFDN 166
Query: 274 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLL 327
L ++PN+C + G F+ G ++ KCF+ + ++ AL+ +L+
Sbjct: 167 ALKINPNDCQSLQYKGEILFKLGRYGEALKCFKKVFERNDKDIRALMYIIQILI 220
>gi|418677215|ref|ZP_13238491.1| tetratricopeptide repeat protein [Leptospira kirschneri serovar
Grippotyphosa str. RM52]
gi|418685525|ref|ZP_13246701.1| tetratricopeptide repeat protein [Leptospira kirschneri serovar
Grippotyphosa str. Moskva]
gi|418741768|ref|ZP_13298142.1| tetratricopeptide repeat protein [Leptospira kirschneri serovar
Valbuzzi str. 200702274]
gi|421091411|ref|ZP_15552182.1| tetratricopeptide repeat protein [Leptospira kirschneri str.
200802841]
gi|400322163|gb|EJO70021.1| tetratricopeptide repeat protein [Leptospira kirschneri serovar
Grippotyphosa str. RM52]
gi|409999739|gb|EKO50424.1| tetratricopeptide repeat protein [Leptospira kirschneri str.
200802841]
gi|410740133|gb|EKQ84855.1| tetratricopeptide repeat protein [Leptospira kirschneri serovar
Grippotyphosa str. Moskva]
gi|410751216|gb|EKR08195.1| tetratricopeptide repeat protein [Leptospira kirschneri serovar
Valbuzzi str. 200702274]
Length = 368
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 42/78 (53%)
Query: 232 EILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIA 291
E + K +++SD ++ + +LG + SG +S+I S L +DP+ D NLGI+
Sbjct: 185 EAIHLFKNAIKSDPEYSLSYLSLGYLYDSSGNFKSAIRYYKSALKIDPDYPDVWNNLGIS 244
Query: 292 YFQSGDMEQSAKCFQDLI 309
Y+ G +E S F+ I
Sbjct: 245 YYNDGQIENSISHFEKAI 262
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 1/94 (1%)
Query: 238 KESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGD 297
K +++ D VWN LG+ G++++SIS + ++P + NLG Y Q D
Sbjct: 225 KSALKIDPDYPDVWNNLGISYYNDGQIENSISHFEKAIQLNPTFAYPVNNLGFIYIQKDD 284
Query: 298 MEQSAKCFQDLILKDQNHPAAL-INYAALLLCKY 330
+ K F I P L +A L +C Y
Sbjct: 285 FSDAKKYFLRSIELKPLEPFLLGETFAGLSICNY 318
>gi|381150819|ref|ZP_09862688.1| tetratricopeptide repeat protein [Methylomicrobium album BG8]
gi|380882791|gb|EIC28668.1| tetratricopeptide repeat protein [Methylomicrobium album BG8]
Length = 534
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 79/184 (42%), Gaps = 22/184 (11%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 213
P A HF LG++ +L P AV+SY KA + L+ A L +L+Q Q
Sbjct: 77 PGIAEIHFNLGVLQTQLNDPKAAVASYRKA--LQLKPALPSAHFNLGALLQ---GQGFPK 131
Query: 214 ESSGDNSLDKELEPEELE---------EILSKLKESMQSDTRQAVVWN-------TLGLI 257
E++ +LEP E + KL+E+ Q RQA+ + LG +
Sbjct: 132 EAAQHYRKAADLEPRFFEAHGNLGTVLQQQGKLEEAKQC-YRQALAIHADAQGRFNLGTV 190
Query: 258 LLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPA 317
L GR Q +I + +DP D +LG G+ME++ +C++ + H
Sbjct: 191 LYGLGRHQEAIEEFGEAVNLDPQFADAWNSLGETLRDRGEMEEAVRCYERALAAQPEHGR 250
Query: 318 ALIN 321
A N
Sbjct: 251 ARYN 254
Score = 43.5 bits (101), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 44/207 (21%), Positives = 74/207 (35%), Gaps = 46/207 (22%)
Query: 249 VVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDL 308
V++N +GL + G+L+ + + L+A+DP + NLG+ Q D + + ++
Sbjct: 47 VLYNVIGLCQQRQGKLKEAAASFRKLVAIDPGIAEIHFNLGVLQTQLNDPKAAVASYRKA 106
Query: 309 ILKDQNHPAALINYAALLLCK--------------------------YGSVLAGAGANTG 342
+ P+A N ALL + G+VL G
Sbjct: 107 LQLKPALPSAHFNLGALLQGQGFPKEAAQHYRKAADLEPRFFEAHGNLGTVLQQQGKLEE 166
Query: 343 EGACLDQASAVNV--------------------AKECLLAALKADPKAAHIWANLANAYY 382
C QA A++ A E A+ DP+ A W +L
Sbjct: 167 AKQCYRQALAIHADAQGRFNLGTVLYGLGRHQEAIEEFGEAVNLDPQFADAWNSLGETLR 226
Query: 383 LTGDHRSSGKCLEKAAKLEPNCMSTRY 409
G+ + +C E+A +P RY
Sbjct: 227 DRGEMEEAVRCYERALAAQPEHGRARY 253
>gi|148553984|ref|YP_001261566.1| hypothetical protein Swit_1062 [Sphingomonas wittichii RW1]
gi|148499174|gb|ABQ67428.1| Tetratricopeptide TPR_2 repeat protein [Sphingomonas wittichii RW1]
Length = 503
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 85/215 (39%), Gaps = 30/215 (13%)
Query: 226 EPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCI 285
+PE ++++L + D A V G+ +SG L ++ ++ LA DP+N +
Sbjct: 17 DPEAARPLVARLLAAHPGD---ADVLTVAGIAAQRSGGLDEALGHFAAALAADPDNPARL 73
Query: 286 GNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGA 345
GN +A Q+G + + + + P L N G+
Sbjct: 74 GNHAVALKQAGRFDAAIAALERALALRPGAPVTLANL---------------------GS 112
Query: 346 CLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 405
CL A A+ L AA+ A P W NL A TG + + +A L P
Sbjct: 113 CLIAADRPKEAEAPLRAAVAAKPDHVEAWNNLGVALARTGRAAEAEQAYARALALRPG-- 170
Query: 406 STRYA-VAVSRIKDAERSQEPTEQLSWAGNEMASI 439
YA A++R+ +R TE AG +AS+
Sbjct: 171 ---YAEAALNRVDALDRLGRGTEAERIAGAVLASL 202
>gi|159028889|emb|CAO90694.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length = 1271
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/303 (20%), Positives = 116/303 (38%), Gaps = 46/303 (15%)
Query: 138 KVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARP 197
++ S K + + P A ++ LG + + GQ +A+S Y++A E ++P
Sbjct: 1013 ELESAKNFYLQAIKVDPTYAKSYHNLGFLAAQQGQLEEAISYYQQAIE---------SQP 1063
Query: 198 ELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLI 257
+ P + + L E + +E E+ ++ S+Q D+ V+ +L +
Sbjct: 1064 DY-------------PSAFYNLGLVYE-QLKETEKAIACYSHSVQLDSTNVEVYKSLAQL 1109
Query: 258 LLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPA 317
+ + L + P+N + NLG+ ++ +++ CFQ +I Q P
Sbjct: 1110 YDRQENYAKAEKYYRCALLLQPHNLELRYNLGVVLYEQEKFDKAVSCFQKII---QAKPQ 1166
Query: 318 ALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANL 377
I Y L G Q + AK C A++ DP A + NL
Sbjct: 1167 DAIAYLHL------------------GISYKQQKLLTKAKSCFEKAIELDPDYAMAYYNL 1208
Query: 378 ANAYYLTGDHRSSGKCLEKAAKLEP--NCMSTRYAVAVSRIKDAERSQEPTEQLSWAGNE 435
Y D + + C ++ + +P T A+S IK+ + W N+
Sbjct: 1209 GVVYSCQPDEKKAVDCFRQSLRCDPANKLAHTALLFALSGIKEVSSEEIYDASSRWYRNK 1268
Query: 436 MAS 438
+ +
Sbjct: 1269 IQT 1271
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 35/166 (21%), Positives = 63/166 (37%), Gaps = 21/166 (12%)
Query: 248 AVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQD 307
A ++ LG +G L+S+ + + VDP NLG Q G +E++ +Q
Sbjct: 998 AAYYHQLGREKTLTGELESAKNFYLQAIKVDPTYAKSYHNLGFLAAQQGQLEEAISYYQQ 1057
Query: 308 LILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKAD 367
I ++P+A N G +Q A C +++ D
Sbjct: 1058 AIESQPDYPSAFYNL---------------------GLVYEQLKETEKAIACYSHSVQLD 1096
Query: 368 PKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAV 413
++ +LA Y ++ + K A L+P+ + RY + V
Sbjct: 1097 STNVEVYKSLAQLYDRQENYAKAEKYYRCALLLQPHNLELRYNLGV 1142
Score = 38.9 bits (89), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 91/217 (41%), Gaps = 30/217 (13%)
Query: 128 LGTSSSSREEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEIL 187
L EE +S + + P A + LGL+Y++L + KA++ Y + ++
Sbjct: 1041 LAAQQGQLEEAISYYQQAI----ESQPDYPSAFYNLGLVYEQLKETEKAIACYSHSVQL- 1095
Query: 188 LRCEADIARPELL-SLVQIH-----------HAQCLLPESSGDNSLDKEL-----EPEEL 230
D E+ SL Q++ + +C L + L L E E+
Sbjct: 1096 -----DSTNVEVYKSLAQLYDRQENYAKAEKYYRCALLLQPHNLELRYNLGVVLYEQEKF 1150
Query: 231 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 290
++ +S ++ +Q+ + A+ + LG+ + L + S + +DP+ NLG+
Sbjct: 1151 DKAVSCFQKIIQAKPQDAIAYLHLGISYKQQKLLTKAKSCFEKAIELDPDYAMAYYNLGV 1210
Query: 291 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLL 327
Y D +++ CF+ + D PA + + ALL
Sbjct: 1211 VYSCQPDEKKAVDCFRQSLRCD---PANKLAHTALLF 1244
>gi|390440633|ref|ZP_10228859.1| conserved hypothetical protein [Microcystis sp. T1-4]
gi|389836095|emb|CCI32985.1| conserved hypothetical protein [Microcystis sp. T1-4]
Length = 607
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 74/186 (39%), Gaps = 21/186 (11%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
+LEE ++ ++ + + A W+ LG+I+ G++ +I L ++PN + NL
Sbjct: 408 KLEEAIALYQQLINQHPQYAADWHQLGVIMDSLGQIDQAILAYKQALLINPNYAETHNNL 467
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLD 348
GI G+++++ CF I +QN+ A A G L
Sbjct: 468 GIIAVSKGNLDEAIICFNQAIRSNQNY---------------------AFAENNLGLVLQ 506
Query: 349 QASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTR 408
+ A A++ +P NL N L G + + A KL P +
Sbjct: 507 MQDKLGDAAVKFQEAIRKNPNYPEAHFNLGNVLQLQGKTEEAIAYFQTAIKLNPKYIKAY 566
Query: 409 YAVAVS 414
++A++
Sbjct: 567 NSLALA 572
>gi|427717067|ref|YP_007065061.1| hypothetical protein Cal7507_1771 [Calothrix sp. PCC 7507]
gi|427349503|gb|AFY32227.1| hypothetical protein Cal7507_1771 [Calothrix sp. PCC 7507]
Length = 1269
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 72/188 (38%), Gaps = 13/188 (6%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
EL+ ++ ++++ +N LG L G+++ +I+ LL ++PN NL
Sbjct: 598 ELKAAVASFTKAIRLQPDYIAAYNQLGNALQGLGQIEGAIAAYQKLLTINPNVAQAHCNL 657
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLA------------- 335
G + G +++ +Q I N A +N L + + A
Sbjct: 658 GSIWQMQGKTQEAIAAYQRAIQLQPNFAVAYLNLGRLYANQQSWLEAKQCLQQAVRLQPE 717
Query: 336 GAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLE 395
A G L Q + A CL ALK P W +L + GD + C +
Sbjct: 718 SVAAYYNLGNVLGQIGQIEKAIACLHHALKHQPDFVDTWHSLGCLWMAQGDMDKAQTCFQ 777
Query: 396 KAAKLEPN 403
+ L+P+
Sbjct: 778 QVVTLQPD 785
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 78/163 (47%), Gaps = 23/163 (14%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 213
P A AH LG ++Q G+ +A+++Y++A I L+ +A L+L +++ Q
Sbjct: 648 PNVAQAHCNLGSIWQMQGKTQEAIAAYQRA--IQLQPNFAVA---YLNLGRLYANQ---- 698
Query: 214 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 273
LE ++ L+++++ + LG +L + G+++ +I+ L
Sbjct: 699 --------QSWLEAKQC------LQQAVRLQPESVAAYYNLGNVLGQIGQIEKAIACLHH 744
Query: 274 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHP 316
L P+ D +LG + GDM+++ CFQ ++ ++P
Sbjct: 745 ALKHQPDFVDTWHSLGCLWMAQGDMDKAQTCFQQVVTLQPDYP 787
>gi|118357165|ref|XP_001011832.1| DNA polymerase family B containing protein [Tetrahymena thermophila]
gi|89293599|gb|EAR91587.1| DNA polymerase family B containing protein [Tetrahymena thermophila
SB210]
Length = 2315
Score = 50.4 bits (119), Expect = 0.002, Method: Composition-based stats.
Identities = 47/175 (26%), Positives = 75/175 (42%), Gaps = 22/175 (12%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
+ ++ L K ES+Q + Q ++NT+G I + +I L + P+ + NL
Sbjct: 1839 KFQDALQKFNESLQINPLQVDIYNTIGSIYDQQNMKDQAIKQYQKALEIQPSYYTALLNL 1898
Query: 289 GIAYFQSGDMEQSA-KCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL 347
G YF +M + A +CFQ A IN +L + K ++ +
Sbjct: 1899 GNLYFWDKNMVKEANECFQK---------ALDINPNSLQVLKRAALFYYSNNQF------ 1943
Query: 348 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 402
Q + N K AL DP+ I+ LA Y+ G+ + + K LEKA K P
Sbjct: 1944 -QEAIQNYEK-----ALSIDPQDYEIFGCLAQVYHQIGNIQKAIKILEKAIKQNP 1992
Score = 45.8 bits (107), Expect = 0.054, Method: Composition-based stats.
Identities = 33/142 (23%), Positives = 63/142 (44%), Gaps = 21/142 (14%)
Query: 262 GRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALIN 321
G ++ +I L ++PN+ D + N+ + +F +G+ E+S CF+ + +H AL N
Sbjct: 2111 GMIEEAIFWCEKALKINPNSVDVLSNIALLHFMNGNTEESKICFEKTLKIKPDHSYALTN 2170
Query: 322 YAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAY 381
+ L G D + A++ ++ +++ DP H + NL Y
Sbjct: 2171 LGFIYY------LQG-----------DYSKAISFYQQ----SIEIDPSMHHGFNNLGLIY 2209
Query: 382 YLTGDHRSSGKCLEKAAKLEPN 403
G + + EKA ++ PN
Sbjct: 2210 QHQGLAEQAKQQYEKALQILPN 2231
Score = 41.2 bits (95), Expect = 1.5, Method: Composition-based stats.
Identities = 52/255 (20%), Positives = 96/255 (37%), Gaps = 40/255 (15%)
Query: 164 GLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLS-LVQIHHAQCLLPESSGDNSLD 222
L Y Q +A+ +YEKA I D E+ L Q++H
Sbjct: 1934 ALFYYSNNQFQEAIQNYEKALSI------DPQDYEIFGCLAQVYH--------------- 1972
Query: 223 KELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNC 282
+ +++ + L+++++ + R LG + G +I + L ++P
Sbjct: 1973 ---QIGNIQKAIKILEKAIKQNPRNHQFHYDLGNYSSEVGLKNEAIQCYLNALEINPEFY 2029
Query: 283 DCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLL--------------C 328
+ NLG Y +E++ CF ++ ALI L + C
Sbjct: 2030 QALNNLGGEYIFMERLEEAQSCFLKILETYPQDFNALIQLVVLCIERGMIEEAKDYLQKC 2089
Query: 329 KYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHR 388
+ L N G C + + A ALK +P + + +N+A +++ G+
Sbjct: 2090 LLNNNLDYDACN-GIAQCYEALGMIEEAIFWCEKALKINPNSVDVLSNIALLHFMNGNTE 2148
Query: 389 SSGKCLEKAAKLEPN 403
S C EK K++P+
Sbjct: 2149 ESKICFEKTLKIKPD 2163
>gi|411117171|ref|ZP_11389658.1| ChAPs family protein (Chs5p-Arf1p-binding),tetratricopeptide repeat
protein [Oscillatoriales cyanobacterium JSC-12]
gi|410713274|gb|EKQ70775.1| ChAPs family protein (Chs5p-Arf1p-binding),tetratricopeptide repeat
protein [Oscillatoriales cyanobacterium JSC-12]
Length = 295
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 100/252 (39%), Gaps = 41/252 (16%)
Query: 186 ILLRCEADIARPELLSLVQIHHAQCLLP----------ESSGDNSLDKEL----EPEELE 231
++L C IA+P AQ LLP E G N L +E + ++ E
Sbjct: 11 LVLACYWGIAQPA--------QAQALLPHTLRIDLKKLEQQGVN-LAQEASQLAQFQQYE 61
Query: 232 EILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIA 291
L + K + Q + + VW LG + L++ L I+ L +D N + LG A
Sbjct: 62 LALQRAKLATQLAPKSSEVWALLGALYLQTNALDDGIAALKKAQTLDSKNSAVLFALGSA 121
Query: 292 YFQSGDMEQSAKCFQDLILKDQNHPAALINY--AALLLCKYGSVLAGAGANTGE------ 343
+FQ G QS + + + N P AL + A L+L KY ++ +
Sbjct: 122 HFQKGKYTQSVEYITEGLKVRPNVPGALFDLGNAYLMLRKYPEAISQYDKAIAQDKNFWP 181
Query: 344 -----GACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAA 398
G ++ V+ A AA DPKAA +A A Y GD E A
Sbjct: 182 AINNIGLIHYESGNVDEAIRRWQAAADIDPKAAEPRLAIAVATYTKGDREKGLTLGESAI 241
Query: 399 KLEPNCMSTRYA 410
+L+ +RYA
Sbjct: 242 RLD-----SRYA 248
>gi|213962696|ref|ZP_03390957.1| tetratricopeptide TPR_2 repeat protein [Capnocytophaga sputigena
Capno]
gi|213954691|gb|EEB66012.1| tetratricopeptide TPR_2 repeat protein [Capnocytophaga sputigena
Capno]
Length = 447
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 62/164 (37%), Gaps = 15/164 (9%)
Query: 262 GRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALIN 321
G +Q + S L+ L +P LG Y GD + + +C I+ D A
Sbjct: 177 GDVQEATSFLNHYLDQNPYCEVAWYYLGRLYLAIGDYKNALRCLDFAIISDDTFTGAYFE 236
Query: 322 YAALL---------LCKYGSVLA----GAGANTGEGACLDQASAVNVAKECLLAALKADP 368
A +L + Y L A A G C ++ A+E A DP
Sbjct: 237 KARVLEMMEDYEKAIENYKITLTLDDPSALAYLHIGRCYEKMHNDTKAEEYYFRATHEDP 296
Query: 369 KAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN--CMSTRYA 410
+ W LA+ YYL +H + K ++K EPN RYA
Sbjct: 297 QLDKAWITLADFYYLRHNHSKALKYIQKVLTFEPNEPYYWRRYA 340
>gi|327401465|ref|YP_004342304.1| hypothetical protein Arcve_1589 [Archaeoglobus veneficus SNP6]
gi|327316973|gb|AEA47589.1| Tetratricopeptide TPR_1 repeat-containing protein [Archaeoglobus
veneficus SNP6]
Length = 454
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 41/84 (48%), Gaps = 2/84 (2%)
Query: 324 ALLLCKYGSVL--AGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAY 381
A+ LC + + A A G+GA L + A EC ALK +PK + W N NA
Sbjct: 265 AMTLCNWALAVDPTYADAWNGKGAVLYKFGKYYEAIECFTKALKINPKFVNAWNNKGNAL 324
Query: 382 YLTGDHRSSGKCLEKAAKLEPNCM 405
G +R + KC KA +++P M
Sbjct: 325 CRLGKYRDAIKCYNKALEIDPEYM 348
Score = 39.7 bits (91), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 22/99 (22%), Positives = 44/99 (44%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
E E+ ++ ++ D A WN G +L K G+ +I + L ++P + N
Sbjct: 261 EYEKAMTLCNWALAVDPTYADAWNGKGAVLYKFGKYYEAIECFTKALKINPKFVNAWNNK 320
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLL 327
G A + G + KC+ + D + A++N + + +
Sbjct: 321 GNALCRLGKYRDAIKCYNKALEIDPEYMEAIMNLSEIFI 359
Score = 39.7 bits (91), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 29/62 (46%)
Query: 485 AGAGESAFLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKVL 544
A G+ A L + A EC ALK +PK + W N NA G +R + KC K L
Sbjct: 282 AWNGKGAVLYKFGKYYEAIECFTKALKINPKFVNAWNNKGNALCRLGKYRDAIKCYNKAL 341
Query: 545 MV 546
+
Sbjct: 342 EI 343
>gi|443646867|ref|ZP_21129545.1| tetratricopeptide repeat family protein [Microcystis aeruginosa
DIANCHI905]
gi|443335696|gb|ELS50160.1| tetratricopeptide repeat family protein [Microcystis aeruginosa
DIANCHI905]
Length = 1254
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/303 (20%), Positives = 116/303 (38%), Gaps = 46/303 (15%)
Query: 138 KVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARP 197
++ S K + + P A ++ LG + + GQ +A+S Y++A E ++P
Sbjct: 996 ELESAKNFYLQAIKVDPTYAKSYHNLGFLAAQQGQLEEAISYYQQAIE---------SQP 1046
Query: 198 ELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLI 257
+ P + + L E + +E E+ ++ S+Q D+ V+ +L +
Sbjct: 1047 DY-------------PSAFYNLGLVYE-QLKETEKAIACYSHSVQLDSTNVEVYKSLAQL 1092
Query: 258 LLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPA 317
+ + L + P+N + NLG+ ++ +++ CFQ +I Q P
Sbjct: 1093 YDRQENYAKAEKYYRCALLLQPHNLELRYNLGVVLYEQEKFDKAVSCFQKII---QAKPQ 1149
Query: 318 ALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANL 377
I Y L G Q + AK C A++ DP A + NL
Sbjct: 1150 DAIAYLHL------------------GISYKQQKLLTKAKSCFEKAIELDPDYAMAYYNL 1191
Query: 378 ANAYYLTGDHRSSGKCLEKAAKLEP--NCMSTRYAVAVSRIKDAERSQEPTEQLSWAGNE 435
Y D + + C ++ + +P T A+S IK+ + W N+
Sbjct: 1192 GVVYSCQPDEKKAVDCFRQSLRCDPANKLAHTALLFALSGIKEVSSEEIYDASSRWYRNK 1251
Query: 436 MAS 438
+ +
Sbjct: 1252 IQT 1254
Score = 40.4 bits (93), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 35/166 (21%), Positives = 63/166 (37%), Gaps = 21/166 (12%)
Query: 248 AVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQD 307
A ++ LG +G L+S+ + + VDP NLG Q G +E++ +Q
Sbjct: 981 AAYYHQLGREKTLTGELESAKNFYLQAIKVDPTYAKSYHNLGFLAAQQGQLEEAISYYQQ 1040
Query: 308 LILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKAD 367
I ++P+A N G +Q A C +++ D
Sbjct: 1041 AIESQPDYPSAFYNL---------------------GLVYEQLKETEKAIACYSHSVQLD 1079
Query: 368 PKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAV 413
++ +LA Y ++ + K A L+P+ + RY + V
Sbjct: 1080 STNVEVYKSLAQLYDRQENYAKAEKYYRCALLLQPHNLELRYNLGV 1125
Score = 38.5 bits (88), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 91/217 (41%), Gaps = 30/217 (13%)
Query: 128 LGTSSSSREEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEIL 187
L EE +S + + P A + LGL+Y++L + KA++ Y + ++
Sbjct: 1024 LAAQQGQLEEAISYYQQAI----ESQPDYPSAFYNLGLVYEQLKETEKAIACYSHSVQL- 1078
Query: 188 LRCEADIARPELL-SLVQIH-----------HAQCLLPESSGDNSLDKEL-----EPEEL 230
D E+ SL Q++ + +C L + L L E E+
Sbjct: 1079 -----DSTNVEVYKSLAQLYDRQENYAKAEKYYRCALLLQPHNLELRYNLGVVLYEQEKF 1133
Query: 231 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 290
++ +S ++ +Q+ + A+ + LG+ + L + S + +DP+ NLG+
Sbjct: 1134 DKAVSCFQKIIQAKPQDAIAYLHLGISYKQQKLLTKAKSCFEKAIELDPDYAMAYYNLGV 1193
Query: 291 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLL 327
Y D +++ CF+ + D PA + + ALL
Sbjct: 1194 VYSCQPDEKKAVDCFRQSLRCD---PANKLAHTALLF 1227
>gi|443324671|ref|ZP_21053408.1| capsular polysaccharide biosynthesis protein [Xenococcus sp. PCC
7305]
gi|442795712|gb|ELS05062.1| capsular polysaccharide biosynthesis protein [Xenococcus sp. PCC
7305]
Length = 903
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 85/221 (38%), Gaps = 22/221 (9%)
Query: 207 HAQCLLPESSGDNSLDKELEP---------EELEEILSKLKESMQSDTRQAVVWNTLGLI 257
HA + + DN +E+ P + ++ ++ S+ + QA + LGL+
Sbjct: 21 HAIAICAQLLKDNPEQQEVYPLLAKAYANQGDFDKAITAYHISLGNQPEQAQICAELGLL 80
Query: 258 LLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPA 317
K + +IS +A+ P + NL + + + GD EQ+ +Q + N+ A
Sbjct: 81 YSKQKKFTQAISNYQKAIALKPTWAEIYYNLAVIWHEVGDWEQTITAYQQAVKHKPNYTA 140
Query: 318 ALINYAALL---------LCKYGSVL----AGAGANTGEGACLDQASAVNVAKECLLAAL 364
A N L + Y + A + G+ L + A E L L
Sbjct: 141 AYFNLGLLYDNRGQWNEAVANYQRAIELQPYNIRAYSNLGSTLARHQKYESAIEVLQQGL 200
Query: 365 KADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 405
K DP A + NL +L G + E A LEP+ +
Sbjct: 201 KIDPTWATLHNNLGQVLWLEGRLDQALVSFELALSLEPDMV 241
Score = 39.3 bits (90), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 80/186 (43%), Gaps = 23/186 (12%)
Query: 144 TGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLV 203
T + P A+F LGL+Y GQ +AV++Y++A E L+ A L S +
Sbjct: 126 TAYQQAVKHKPNYTAAYFNLGLLYDNRGQWNEAVANYQRAIE--LQPYNIRAYSNLGSTL 183
Query: 204 QIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGR 263
H ++ E + L++ ++ D A + N LG +L GR
Sbjct: 184 ARH---------------------QKYESAIEVLQQGLKIDPTWATLHNNLGQVLWLEGR 222
Query: 264 LQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYA 323
L ++ L+++P+ NL + Q + +++ Q++ + N+ +A N
Sbjct: 223 LDQALVSFELALSLEPDMVLANHNLSRLWQQESNYDRAFSYLQEVTELEPNNSSAHNNCL 282
Query: 324 ALLLCK 329
++LL K
Sbjct: 283 SILLKK 288
>gi|113476446|ref|YP_722507.1| sulfotransferase [Trichodesmium erythraeum IMS101]
gi|110167494|gb|ABG52034.1| sulfotransferase [Trichodesmium erythraeum IMS101]
Length = 681
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 117/285 (41%), Gaps = 36/285 (12%)
Query: 153 MPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEE------ILLRCEADI---ARPELLSLV 203
P A AH +G MY + KA Y+KA I+ R A + E L+
Sbjct: 75 FPDFAEAHANIGSMYAKQRDWEKAFFYYQKAIHIKPNLAIVYRNLAKVCECTEKEELATE 134
Query: 204 QIHHAQCLLPESSGD----NSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILL 259
+ A L PES+ N K LE ++E + + +++ + + + LG +L+
Sbjct: 135 YTYKALILEPESATAIEHLNIGKKLLELNKIEAAIKCYRNAVKINPNLSAGYQNLGELLV 194
Query: 260 KSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLI-LKDQNHPAA 318
K+G L+S++ L + +D N C LG + + G + + + I LK +NH
Sbjct: 195 KNGELESALIALREGIKIDAKNPRCYYLLGEVWQKQGQYKLAISDYSRAIELKPENH--- 251
Query: 319 LINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLA 378
L K G V G ++VA C A++ +P + +L
Sbjct: 252 ------LFHKKLGDVWEKMG-------------KLDVAISCYEKAIEINPNFFWSYHSLG 292
Query: 379 NAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQ 423
N Y + +KA + PN +T Y +A + + ++++ +
Sbjct: 293 NVYTKQQKWDKAIAAYDKATIINPNFSNTYYNLADAFLHNSQKEE 337
>gi|118350326|ref|XP_001008444.1| TPR Domain containing protein [Tetrahymena thermophila]
gi|89290211|gb|EAR88199.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
Length = 550
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 124/286 (43%), Gaps = 50/286 (17%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 213
P+N +A F LG+ ++ + +A+ +++K L + D L LV+I+H+ L+
Sbjct: 233 PENINALFELGVTQFQIEELDEAIHNFKKT----LMIQPDHFNA-LFKLVEIYHSADLIE 287
Query: 214 ESSGDNSLDKELEPEELEE--ILSKL--------------KESMQSDTRQAVVWNTLGLI 257
+ +++P ++ IL+ + ++ ++ D+R A LG+I
Sbjct: 288 YAQEYLEQAIKIQPHNVKANLILAGIYLAQKMILEAKQLCEQVIKVDSRNADALYYLGII 347
Query: 258 LLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPA 317
K +Q +IS+ + ++P LG Y Q G +E + ++ ++ N+
Sbjct: 348 YQKENNIQKAISIFKEVTQINPTKYIAQIQLGQLYHQQGKVEDAIISYKRILQVQPNNYF 407
Query: 318 ALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVN------------VAKECLL---- 361
AL NY + LL + G N E C +A AV+ + ++ LL
Sbjct: 408 AL-NYLSFLLYELGDF------NQAELLC-KKALAVDPNAYEPYHNLGLIYQDKLLYEQA 459
Query: 362 -----AALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 402
+ALK++P A + NL YY G+ + + E+A K P
Sbjct: 460 IKFYQSALKSNPDCAEAYNNLGCIYYEKGNLKEAINQFEEAIKANP 505
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 94/227 (41%), Gaps = 44/227 (19%)
Query: 155 KNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPE 214
+NA A + LG++YQ+ KA+S +++ +I IA+ + L Q++H Q
Sbjct: 336 RNADALYYLGIIYQKENNIQKAISIFKEVTQI--NPTKYIAQ---IQLGQLYHQQG---- 386
Query: 215 SSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSL 274
++E+ + K +Q N L +L + G + +
Sbjct: 387 --------------KVEDAIISYKRILQVQPNNYFALNYLSFLLYELGDFNQAELLCKKA 432
Query: 275 LAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVL 334
LAVDPN + NLG+ Y EQ+ K +Q + +++P Y L G +
Sbjct: 433 LAVDPNAYEPYHNLGLIYQDKLLYEQAIKFYQSAL---KSNPDCAEAYNNL-----GCIY 484
Query: 335 AGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAY 381
G N E A+N +E A+KA+PK A NL+ Y
Sbjct: 485 YEKG-NLKE--------AINQFEE----AIKANPKFAEAHKNLSIIY 518
>gi|429751740|ref|ZP_19284648.1| tetratricopeptide repeat protein [Capnocytophaga sp. oral taxon 326
str. F0382]
gi|429180085|gb|EKY21315.1| tetratricopeptide repeat protein [Capnocytophaga sp. oral taxon 326
str. F0382]
Length = 448
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 62/164 (37%), Gaps = 15/164 (9%)
Query: 262 GRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALIN 321
G +Q + S L+ L +P LG Y GD + + +C I+ D A
Sbjct: 177 GDVQEATSFLNHYLDQNPYCEVAWYYLGRLYLAIGDYKNALRCLDFAIISDDTFTGAYFE 236
Query: 322 YAALL---------LCKYGSVLA----GAGANTGEGACLDQASAVNVAKECLLAALKADP 368
A +L + Y L A A G C ++ A+E A DP
Sbjct: 237 KARVLEMMEDYEKAIENYKITLTLDDPSALAYLHIGRCYEKMHNDTKAEEYYFRATHEDP 296
Query: 369 KAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN--CMSTRYA 410
+ W LA+ YYL +H + K ++K EPN RYA
Sbjct: 297 QLDKAWITLADFYYLRHNHSKALKYIQKVLTFEPNEPYYWRRYA 340
>gi|406951596|gb|EKD81486.1| hypothetical protein ACD_39C01785G0001, partial [uncultured
bacterium]
Length = 387
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 111/262 (42%), Gaps = 47/262 (17%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 213
P + A+ LGL+Y + G +EKAE++L R A + + P
Sbjct: 70 PYSEQAYNFLGLIYLQEGL-------FEKAEDMLKRAVA---------------IEPMYP 107
Query: 214 ESSGDNSLDK-ELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLS 272
E+ +L K L + +E + L+ ++ D Q W LG+ SG++ SI+
Sbjct: 108 EAL--RNLGKLYLRQDRFDEATTYLRRTLALDVNQPYTWYLLGMAQYFSGKITESITSYE 165
Query: 273 SLLAVDPN-NCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYG 331
+ +++PN + NLG+AY ++ ++ + +++++ ++ H AL N G
Sbjct: 166 NAFSMEPNLPVEAHYNLGVAYHETSRYLEAVRSYEEVLKQEPAHINALNN--------LG 217
Query: 332 SVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSG 391
V + G ++ A+++ + LK D NL N + T D +
Sbjct: 218 LVYSILG---------EKDRAIDLFNQV----LKIDNGNIKARINLGNVFLSTRDLVEAE 264
Query: 392 KCLEKAAKLEPNCMSTRYAVAV 413
K A L+ + +S R + V
Sbjct: 265 KIYRSAISLDQSDISPRLNLGV 286
>gi|170738881|ref|YP_001767536.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium sp.
4-46]
gi|168193155|gb|ACA15102.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium sp.
4-46]
Length = 1056
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/177 (21%), Positives = 69/177 (38%), Gaps = 23/177 (12%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
+ + + +++Q + + + +N G + G +I+ +S L +DP + N
Sbjct: 245 QYDSAIENYNQALQLNPKSKIAYNNRGFVFYNKGEYDRAIADYNSALQIDPRYVVALVNR 304
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAAL-INYAALLLCKYGSVLAGAGANTGEGACL 347
G A+ GD +++ + D H + NYA A G G L
Sbjct: 305 GDAFVSKGDYDRA--------IGDYGHALQINPNYAF--------------AYNGRGVAL 342
Query: 348 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNC 404
+ A AL+ DPK +AN +A+ G+H + +A +L PN
Sbjct: 343 QNKGEYDRAIMDYDQALRLDPKYVFAFANRGDAFRSKGEHDVAIADYNQALRLSPNY 399
Score = 42.0 bits (97), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 59/309 (19%), Positives = 112/309 (36%), Gaps = 65/309 (21%)
Query: 225 LEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDC 284
EE + ++ ++++ D + G G +I+ + +L +DP +
Sbjct: 139 FSKEEYDRAIADYNQALRLDPKYLSAALNRGDAFRSKGEYDRAIADYNQVLQIDPRSVVS 198
Query: 285 IGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEG 344
N G+A+ G+ +++ + + D + ALIN + K
Sbjct: 199 YNNRGLAFQGKGEYDRAVADYNQALTLDPGYTIALINRGDVFRIK--------------- 243
Query: 345 ACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNC 404
+ A E AL+ +PK+ + N +Y G++ + A +++P
Sbjct: 244 ------GQYDSAIENYNQALQLNPKSKIAYNNRGFVFYNKGEYDRAIADYNSALQIDP-- 295
Query: 405 MSTRYAVAVSRIKDAERSQEPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFAAVQKTH 464
RY VA+ DA S+ G+ +I G +QI P A+A +
Sbjct: 296 ---RYVVALVNRGDAFVSK---------GDYDRAIGDYGHALQINPNYAFA--------Y 335
Query: 465 HEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKADPKAAHIWANLA 524
+ A + + G + A +D AL+ DPK +AN
Sbjct: 336 NGRGVALQNK-----------GEYDRAIMDYDQ-----------ALRLDPKYVFAFANRG 373
Query: 525 NAYYLTGDH 533
+A+ G+H
Sbjct: 374 DAFRSKGEH 382
>gi|146284591|ref|YP_001165544.1| TPR repeat-containing protein [Enterobacter sp. 638]
gi|145320724|gb|ABP62870.1| Tetratricopeptide TPR_2 repeat protein [Enterobacter sp. 638]
Length = 697
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 77/150 (51%), Gaps = 21/150 (14%)
Query: 230 LEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLG 289
L+E + +++ + + A+ WN LG+IL ++G+ ++S+ L + ++ P+N + NL
Sbjct: 98 LQEAEQAARRAVEQEPQLALAWNNLGIILQEAGKFKASLECLQYVASLQPDNAEVHNNLA 157
Query: 290 IAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQ 349
+ + GD++++ + +Q + ++ N A+LL E C+D+
Sbjct: 158 NTWKRLGDLQRAQESYQRALNLRPDYAEVYSNLASLL---------------SELGCIDE 202
Query: 350 ASAVNVAKECLLAALKADPKAAHIWANLAN 379
A+A A++ A+ +P+ A + NLA+
Sbjct: 203 AAA--SARQ----AIDINPQLADAYLNLAD 226
>gi|408790965|ref|ZP_11202576.1| anaphase-promoting complex, cyclosome, subunit 3 [Leptospira meyeri
serovar Hardjo str. Went 5]
gi|408464994|gb|EKJ88718.1| anaphase-promoting complex, cyclosome, subunit 3 [Leptospira meyeri
serovar Hardjo str. Went 5]
Length = 700
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 87/206 (42%), Gaps = 23/206 (11%)
Query: 128 LGTSSSSREEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKA---- 183
LGT RE+ + V R +A +++ LGL+Y + P +A ++KA
Sbjct: 292 LGTIFYQRED-YDRAEFYFREVIRLKTNDAKSYYNLGLVYLKKKVPEEAAKYFQKALDSN 350
Query: 184 --EEILLRCEADIARPELLSLVQIHHA-----QCLLPESSGDNSL-------DKELEPEE 229
E + R AD LS+ Q + A + LL + S +SL K+ E E
Sbjct: 351 ANEPEVYRYIADA----FLSMGQTNMAITALKKALLLKPSDVDSLFALSELYYKKGELVE 406
Query: 230 LEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLG 289
E + ++ DT + LG+IL + R SI+ LA++P N NLG
Sbjct: 407 AESLFRRIIRLTPGDTYSETAYVNLGIILDEMERYSESITSFEGALALNPKNQSAYYNLG 466
Query: 290 IAYFQSGDMEQSAKCFQDLILKDQNH 315
+AY +G + + + D NH
Sbjct: 467 LAYLHAGKPTMAIESLRKSQALDPNH 492
Score = 46.6 bits (109), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 83/204 (40%), Gaps = 21/204 (10%)
Query: 231 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 290
EE ++++ S+ + V+ + L G+ +I+ L L + P++ D + L
Sbjct: 337 EEAAKYFQKALDSNANEPEVYRYIADAFLSMGQTNMAITALKKALLLKPSDVDSLFALSE 396
Query: 291 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQA 350
Y++ G++ ++ F+ +I + Y L G LD+
Sbjct: 397 LYYKKGELVEAESLFRRIIRLTPGDTYSETAYVNL------------------GIILDEM 438
Query: 351 SAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYA 410
+ + AL +PK + NL AY G + + L K+ L+PN +R A
Sbjct: 439 ERYSESITSFEGALALNPKNQSAYYNLGLAYLHAGKPTMAIESLRKSQALDPNHTQSRLA 498
Query: 411 VAVSRIKDAERSQ---EPTEQLSW 431
+A +++ S+ E E ++W
Sbjct: 499 IADYYLENRFYSEAIAEYEEAIAW 522
>gi|405965071|gb|EKC30496.1| Tetratricopeptide repeat protein 37 [Crassostrea gigas]
Length = 1452
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 98/232 (42%), Gaps = 36/232 (15%)
Query: 261 SGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQ-SGDMEQSAKCFQDLILKDQNHPAA- 318
S LQ+ + L +DP + + LG Y + D + +C+Q D+N+ A
Sbjct: 467 SNNLQTCYTALLKSAKLDPYSSEPFEYLGRFYTEIQKDKGKGKRCYQKAFDLDRNNDKAG 526
Query: 319 -----LIN--------YAALLLCKYGSVLAGAGANTGEGACLD------QASAVNVAKEC 359
L+ Y LL SV + A A + A L + ++VA
Sbjct: 527 EALCDLMTELGEEEDAYQLLL-----SVTSSASAGCCKWAWLRLGLHQVKHDTISVAISS 581
Query: 360 LLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDA 419
+AL+ADPK H++ LA AYY G + ++ K KA++L P + + + +A IK
Sbjct: 582 FQSALRADPKDPHVFECLAEAYYKRGSYTAALKAFIKASELNPKSLYSLFMIAC--IKQT 639
Query: 420 ERSQEPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFAAVQKTHHEVAAAF 471
R LS A + IL EG P + P + G V + H ++ F
Sbjct: 640 LRV------LSEAVDNYKHIL-EGSPNYV-PALKGLGETYVLQAKHHLSQGF 683
>gi|294495545|ref|YP_003542038.1| hypothetical protein Mmah_0870 [Methanohalophilus mahii DSM 5219]
gi|292666544|gb|ADE36393.1| Tetratricopeptide TPR_2 repeat protein [Methanohalophilus mahii DSM
5219]
Length = 288
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 72/181 (39%), Gaps = 2/181 (1%)
Query: 231 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 290
EE L + ++ D + A W G ++ G+ Q ++ S L ++P D
Sbjct: 97 EEALEVIDSFLEDDPQDADKWFGHGFVMQSIGQHQKAVESFSKCLDLNPAFSDAWYCKAT 156
Query: 291 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLA-GAGANTGEGACLDQ 349
+ + + Q+ +C++ A Y+ L + + AG G+G L +
Sbjct: 157 LLYHNDEFTQALECYEMAAQHSDVKDFAFPRYSFLNIDPKPKLKKDAAGILYGKGNTLFK 216
Query: 350 ASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP-NCMSTR 408
A E AL +P++ IW LAN Y G+ + K K +L+P N +
Sbjct: 217 LERFEEAIEAFKGALDIEPESPKIWQGLANTYLKIGNDDRANKAFAKLLELDPENSQAKE 276
Query: 409 Y 409
Y
Sbjct: 277 Y 277
>gi|406952433|gb|EKD82044.1| hypothetical protein ACD_39C01506G0001, partial [uncultured
bacterium]
Length = 994
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 82/397 (20%), Positives = 154/397 (38%), Gaps = 66/397 (16%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 213
P A ++ LG +YQ + + KA+++ KA E DI E A +
Sbjct: 2 PNFAQGYYELGRVYQDINENEKALANLRKA------VELDIDYTE---------AHFAIG 46
Query: 214 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 273
S + + D E +L +++ LGL+ ++GR Q +I +S
Sbjct: 47 RISFEENQD--------ETARIRLTRTIELAPAHDQAHYYLGLLHHRNGRYQQAIDEFNS 98
Query: 274 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSV 333
+A+ P +L + Y SG+ +++ + ++ + + A+I YA
Sbjct: 99 AIALSPKPSRIQFDLAMLYADSGNWQEAKTILEKVLEHEHDFIDAIIQYAI--------- 149
Query: 334 LAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKC 393
L+ + A+E L A++ P+ NLA Y T +
Sbjct: 150 ------------TLEHLEMLKEAEEEYLRAIELQPEGLRAHENLARLYESTNQIYKAEDE 197
Query: 394 LEKAAKLEPNCMSTRYAVA-VSRIKDAERSQEPTEQLSWAGNEMASILREGDPVQIEPPI 452
K +++PN ++ + ++A + I+D A N + ++ V IEP I
Sbjct: 198 FRKVVEIKPNHVAAQMSLAKIYIIRDLHDK---------ALNALHTV------VDIEPEI 242
Query: 453 AWAGFAAVQKTHHEVA--AAFETEENELSKMEECAGAG---ESAFLDQASAVNVAKECLL 507
A + HH A + E+ ++ + E A +L + +E L
Sbjct: 243 FEAHLELGRIYHHHNALEKSVESYKSAIRIRAEAPQAHVELAEVYLAMEKSARAIEEYKL 302
Query: 508 AALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKVL 544
A L+ DP A ANL + Y ++ + +G C +++
Sbjct: 303 A-LEIDPSLAEALANLGDLYNMSEQYELAGNCYRRLV 338
Score = 45.1 bits (105), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 82/406 (20%), Positives = 154/406 (37%), Gaps = 88/406 (21%)
Query: 99 KLGKCRSRIS------SKMDSALEFGVDADGDQSGLGTSSSSREEKVSSLKTGLVHVARK 152
+LG+ I+ + + A+E +D +G S E + + + L
Sbjct: 10 ELGRVYQDINENEKALANLRKAVELDIDYTEAHFAIGRISFE-ENQDETARIRLTRTIEL 68
Query: 153 MPKNAHAHFLLGLMYQRLGQPLKAVSSY---------------------------EKAEE 185
P + AH+ LGL++ R G+ +A+ + ++A+
Sbjct: 69 APAHDQAHYYLGLLHHRNGRYQQAIDEFNSAIALSPKPSRIQFDLAMLYADSGNWQEAKT 128
Query: 186 IL---LRCEADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELE--EILSKLKES 240
IL L E D + + + H + +L E+ + EL+PE L E L++L ES
Sbjct: 129 ILEKVLEHEHDFIDAIIQYAITLEHLE-MLKEAEEEYLRAIELQPEGLRAHENLARLYES 187
Query: 241 M------QSDTRQAV--------VWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIG 286
+ + R+ V +L I + +++ L +++ ++P +
Sbjct: 188 TNQIYKAEDEFRKVVEIKPNHVAAQMSLAKIYIIRDLHDKALNALHTVVDIEPEIFEAHL 247
Query: 287 NLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGAC 346
LG Y +E+S + ++ I P A + A + L A
Sbjct: 248 ELGRIYHHHNALEKSVESYKSAIRIRAEAPQAHVELAEVYL-----------------AM 290
Query: 347 LDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMS 406
A A+ K AL+ DP A ANL + Y ++ + +G C + +++P S
Sbjct: 291 EKSARAIEEYK----LALEIDPSLAEALANLGDLYNMSEQYELAGNCYRRLVEMDPQNHS 346
Query: 407 TRYAVAVS-------------RIKDAERSQEPTEQLSWAGNEMASI 439
R+ +A + +K AE ++E T+ L G AS+
Sbjct: 347 ARFRLAETCYHCGQLEKALDEYLKVAEINEERTDALIRLGKIYASL 392
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 57/278 (20%), Positives = 107/278 (38%), Gaps = 44/278 (15%)
Query: 147 VHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQI- 205
V V P+N+ H LG +Y L + A+ +E A E + PE+L+ + +
Sbjct: 403 VRVFETDPQNSLIHLELGKVYDHLNRLTDALREFEAA------LEREPNNPEILTQIGLM 456
Query: 206 HHAQCLLP----------ESSGDNSL-DKEL-----EPEELEEILSKLKESMQSDTRQAV 249
H Q L + G N L +EL +++ + + KE++ + V
Sbjct: 457 HRKQGNLDMAIERFNRAIQIDGSNPLPHRELAMAYINKGRVDKAIGEFKEALNYEPSNIV 516
Query: 250 VWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLI 309
V L G + ++ ++ +DP N + LGI Y G + + F+ +I
Sbjct: 517 VNIELAKAYASQGIIDDAVDSYRKVIGLDPRNSNAHFELGIIYSTQGLNDNAISEFKTVI 576
Query: 310 LKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPK 369
+H A + G L V+ A + L A + DP+
Sbjct: 577 GLSPDHKRAHLEL---------------------GRHLRDTGRVDEAIDELRKASQLDPE 615
Query: 370 AAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 407
A I+ L + YY +++ + ++A +L+ + +
Sbjct: 616 NAVIYYELGDVYYQRDEYQDALVKFKRALELQDDYVDV 653
>gi|449126796|ref|ZP_21763074.1| hypothetical protein HMPREF9733_00477 [Treponema denticola SP33]
gi|448945737|gb|EMB26606.1| hypothetical protein HMPREF9733_00477 [Treponema denticola SP33]
Length = 939
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 64/163 (39%), Gaps = 21/163 (12%)
Query: 250 VWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLI 309
N +G+I + SI +L A+D N + NLG Y Q+GD + + +CF D++
Sbjct: 79 TLNNMGVIYRRLNMFNESIVILEKTKAIDNKNETTLYNLGNTYKQNGDYKHAIQCFTDVL 138
Query: 310 LKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPK 369
P + Y L GSV C D A+ K LK DP
Sbjct: 139 ---DIKPDDALAYNHL-----GSVYF---------LCKDYPKALETYK----IGLKVDPN 177
Query: 370 AAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVA 412
+ NLA Y ++ + + A K +PN A+A
Sbjct: 178 HPFLNFNLAELYKEKKLYKEAINSYQTAIKTKPNWYEALAAIA 220
Score = 47.4 bits (111), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 34/180 (18%), Positives = 70/180 (38%), Gaps = 21/180 (11%)
Query: 233 ILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAY 292
+LS+ K+ + + + LG + ++SG ++ + + L +++PNN D + N+G+ Y
Sbjct: 28 LLSQFKKQKNTPDEYYQLKSLLGKLYIRSGDMKKGLEIYKELNSLNPNNLDTLNNMGVIY 87
Query: 293 FQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASA 352
+ +S + D + L N G Q
Sbjct: 88 RRLNMFNESIVILEKTKAIDNKNETTLYNL---------------------GNTYKQNGD 126
Query: 353 VNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVA 412
A +C L P A + +L + Y+L D+ + + + K++PN + +A
Sbjct: 127 YKHAIQCFTDVLDIKPDDALAYNHLGSVYFLCKDYPKALETYKIGLKVDPNHPFLNFNLA 186
>gi|300868980|ref|ZP_07113584.1| hypothetical protein OSCI_3880037 [Oscillatoria sp. PCC 6506]
gi|300333047|emb|CBN58776.1| hypothetical protein OSCI_3880037 [Oscillatoria sp. PCC 6506]
Length = 725
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 74/188 (39%), Gaps = 20/188 (10%)
Query: 251 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQD-LI 309
WN GL+L + GR++ +I+ + PN + N G A F+ E++ CF + L+
Sbjct: 77 WNNRGLVLYELGRIEEAIASYKQAIKFKPNFHEAWNNRGFALFKLERFEEAIACFDEALV 136
Query: 310 LKDQNHPAALINYAALLLCKYGSVLAG----------------AGANTGEGACLDQASAV 353
+K +H + N + L +G++ A A N G C DQ
Sbjct: 137 IKRDDHK--VWNNRGIALAHFGNLEAALASFDQALAIKSDFYQAWNNRGILLC-DQLGQY 193
Query: 354 NVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAV 413
A A+K P W N A D + +KA ++P+ S+
Sbjct: 194 EEALASFDQAIKFKPDYHDAWYNRGIALGHLEDFEGAINSFDKALAIKPDYYSSLSLEKT 253
Query: 414 SRIKDAER 421
+ +K +R
Sbjct: 254 ATVKQLQR 261
>gi|218782228|ref|YP_002433546.1| hypothetical protein Dalk_4399 [Desulfatibacillum alkenivorans
AK-01]
gi|218763612|gb|ACL06078.1| Tetratricopeptide TPR_2 repeat protein [Desulfatibacillum
alkenivorans AK-01]
Length = 268
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 82/190 (43%), Gaps = 22/190 (11%)
Query: 237 LKESMQS---DTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYF 293
L+E +++ D + V + LGL+LL GR Q ++ + ++P + NLG AY
Sbjct: 66 LREFLKAEALDPQDVEVQDYLGLVLLTLGRPQEAVEHFQRAVDLNPGYLNAQNNLGCAYL 125
Query: 294 QSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAV 353
+ + +++ + F+DL L + +P K + L A N G+ +
Sbjct: 126 ELAEWDKAIEVFKDL-LANLTYPTPW---------KPAANLGWAYFNKGD---------M 166
Query: 354 NVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAV 413
+ A E L ++ P A W L Y TG+ + + LEKA P Y +
Sbjct: 167 DAALEYYLMSVDQSPNYAIGWRGLGQVYMETGNPQKAVISLEKALVAAPQFAEAYYDLGE 226
Query: 414 SRIKDAERSQ 423
+ ++ R++
Sbjct: 227 AYLRTGLRTK 236
>gi|157879372|pdb|1NA3|A Chain A, Design Of Stable Alpha-Helical Arrays From An Idealized
Tpr Motif
gi|157879373|pdb|1NA3|B Chain B, Design Of Stable Alpha-Helical Arrays From An Idealized
Tpr Motif
Length = 91
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 36/74 (48%)
Query: 248 AVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQD 307
A W LG K G +I L +DPNN + NLG AY++ GD +++ + +Q
Sbjct: 9 AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQK 68
Query: 308 LILKDQNHPAALIN 321
+ D N+ A N
Sbjct: 69 ALELDPNNAEAKQN 82
Score = 43.1 bits (100), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 32/60 (53%)
Query: 358 ECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIK 417
E AL+ DP A W NL NAYY GD+ + + +KA +L+PN + + ++ K
Sbjct: 30 EYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGNAKQK 89
>gi|435853473|ref|YP_007314792.1| Tfp pilus assembly protein PilF [Halobacteroides halobius DSM 5150]
gi|433669884|gb|AGB40699.1| Tfp pilus assembly protein PilF [Halobacteroides halobius DSM 5150]
Length = 250
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 64/141 (45%), Gaps = 23/141 (16%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 213
P + H++LGL Y RL + A + EKA +I PE H + L+
Sbjct: 62 PDLLYPHYILGLSYDRLEKYSFAETQLEKAHQI---------NPE--------HYRVLI- 103
Query: 214 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 273
+ G LD+ +++E + LK ++Q Q +N LG +K G L+ SI
Sbjct: 104 -NLGRVYLDQG----KIKEAIKVLKRAIQVKQDQDEAYNILGRAYMKQGLLKKSIKYYKQ 158
Query: 274 LLAVDPNNCDCIGNLGIAYFQ 294
+ + NC I NLG+AY +
Sbjct: 159 AVHKNKKNCYAINNLGLAYIR 179
>gi|253998548|ref|YP_003050611.1| hypothetical protein Msip34_0836 [Methylovorus glucosetrophus
SIP3-4]
gi|253985227|gb|ACT50084.1| Tetratricopeptide TPR_2 repeat protein [Methylovorus glucosetrophus
SIP3-4]
Length = 927
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 100/243 (41%), Gaps = 36/243 (14%)
Query: 73 SSHHDKGSILMSKEMDVAEVEGKKINKLGKCR---SRISSKMDSALE---FGVDADGDQS 126
+ HD + +++ +N LG RIS ++ L+ D+ S
Sbjct: 426 TGQHDLAKEYFERALEIDPRFTDALNNLGNLHHSHDRISQAIECYLKSIAIKPDSARAYS 485
Query: 127 GLGTSSSS---REEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKA 183
LG S SS E+ + + KT + R P+ + A++ LG + Q A+ SY++
Sbjct: 486 NLGNSYSSLKDYEKAIDAYKTAI----RLDPQYSDAYYNLGTAQMEIKQFRDAIYSYKQV 541
Query: 184 EEILLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQS 243
EI E D + ++ + A L E ++ EEI SK+
Sbjct: 542 LEI----EPDSVK----AMNNLGVAHTALNEF------------KQAEEIFSKV---FSY 578
Query: 244 DTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAK 303
+T + +G + + +L+ SI L +D N + + NLG+ Y + GD EQ K
Sbjct: 579 ETGHLEAYGNMGNVCCSNNQLEESIKWYEKALEIDAKNPETLWNLGLVYLRQGDFEQGWK 638
Query: 304 CFQ 306
++
Sbjct: 639 HYE 641
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 59/272 (21%), Positives = 108/272 (39%), Gaps = 47/272 (17%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 213
P++A AH+ LG+ + + Q +A++SY +A I L+ + R E + + HA
Sbjct: 70 PRHADAHYNLGIAFGAVRQYPQAIASYMQA--IALKPD----RAEAYYNLGVSHAAL--- 120
Query: 214 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 273
+LE + KE+++ + + LG++L G+ + + S
Sbjct: 121 --------------GQLEPATASYKEAIRLNPAYIKAYRNLGVVLEAQGKHTEATAAYQS 166
Query: 274 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKY-GS 332
LL P++ + L I + + K F + I+ H + I + Y
Sbjct: 167 LLKFRPDDAEAHHQLAINF-------STQKKFDEAII----HYSRAIEINPEFVDAYCNK 215
Query: 333 VLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGK 392
+A N E A L +A+ + P A I+ NL N + +
Sbjct: 216 AIALGKLNKLEDAILMYKAAIELV-----------PDEASIYNNLGNIFSRKRQFEEALS 264
Query: 393 CLEKAAKLEPNCMSTRYAVAVSRIKDAERSQE 424
C E A +L+P + + A + + D ER +E
Sbjct: 265 CFENAIRLQPTYLKA-HCNAGNALIDLERVEE 295
>gi|427738410|ref|YP_007057954.1| tetratricopeptide repeat protein,protein kinase family protein
[Rivularia sp. PCC 7116]
gi|427373451|gb|AFY57407.1| tetratricopeptide repeat protein,protein kinase family protein
[Rivularia sp. PCC 7116]
Length = 564
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 77/172 (44%), Gaps = 21/172 (12%)
Query: 231 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 290
+E ++++ + + + ++N LG I + + +I+ L +DPNN NLG
Sbjct: 354 DEAWGYYQKALYYNPKDSRIYNNLGFICQRQKKYSCAINNFEKSLNLDPNNYITRYNLGE 413
Query: 291 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQ- 349
Y +GD++ + K +Q I+ + + P A A +N G LD
Sbjct: 414 LYEDTGDLKNAEKQYQ--IVMESDSPIA----------------TNAASNLGRLLILDMR 455
Query: 350 -ASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKL 400
+ A+ E L +AA ++ NL AYY+ D++ + LE+A +L
Sbjct: 456 ISEAIKRISEGLKKTDNPRVQAA-LYKNLGWAYYIQTDYKQAKVALEEAIRL 506
>gi|320536427|ref|ZP_08036464.1| tetratricopeptide repeat protein, partial [Treponema phagedenis
F0421]
gi|320146737|gb|EFW38316.1| tetratricopeptide repeat protein [Treponema phagedenis F0421]
Length = 865
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 87/193 (45%), Gaps = 21/193 (10%)
Query: 225 LEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDC 284
L E+ ++ LS K+ + + A V N LG + + G+L S+++L + L + N
Sbjct: 55 LRSEQFQKALSVYKKLQMQNAQDADVLNNLGTVYRRLGKLPESVAILKTALKLGKNRETV 114
Query: 285 IGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEG 344
+ NLG Y + +++A CF+ ++ + +P ++ Y L G++ A
Sbjct: 115 LYNLGNTYKEGEVYDRAADCFKQVL---ELNPNDVLAYNHL-----GTIQA--------- 157
Query: 345 ACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNC 404
L++ + +A E L DP + NLAN +Y G ++ + +A K P
Sbjct: 158 --LEKKTE--LAIETYYKGLLLDPNHPFLHFNLANIFYKQGKLTAALESYLEAVKTMPGF 213
Query: 405 MSTRYAVAVSRIK 417
+ + +A +K
Sbjct: 214 IEAQKNIADIYLK 226
>gi|421131808|ref|ZP_15591985.1| tetratricopeptide repeat protein [Leptospira kirschneri str.
2008720114]
gi|410356744|gb|EKP04050.1| tetratricopeptide repeat protein [Leptospira kirschneri str.
2008720114]
Length = 368
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 42/78 (53%)
Query: 232 EILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIA 291
E + K +++SD ++ + +LG + SG +S+I S L +DP+ D NLGI+
Sbjct: 185 EAIHLFKNAIKSDPEYSLSYLSLGYLYDSSGDFKSAIRYYKSALKIDPDYPDVWNNLGIS 244
Query: 292 YFQSGDMEQSAKCFQDLI 309
Y+ G +E S F+ I
Sbjct: 245 YYNDGQIENSISHFEKAI 262
Score = 45.4 bits (106), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 72/169 (42%), Gaps = 26/169 (15%)
Query: 164 GLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPEL-LSLVQIHHAQCLLPESSGDNSLD 222
G +Y LG+ +A+ ++ A ++D PE LS + + + L +SSGD
Sbjct: 174 GWIYFYLGKSAEAIHLFKNA------IKSD---PEYSLSYLSLGY----LYDSSGD---- 216
Query: 223 KELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNC 282
+ + K +++ D VWN LG+ G++++SIS + ++P
Sbjct: 217 -------FKSAIRYYKSALKIDPDYPDVWNNLGISYYNDGQIENSISHFEKAIQLNPTFA 269
Query: 283 DCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAAL-INYAALLLCKY 330
+ NLG Y Q D + K F I P L +A L +C Y
Sbjct: 270 YPVNNLGFIYIQKDDFSDAKKYFLRSIELKPLEPFLLGETFAGLSICNY 318
Score = 39.7 bits (91), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 88/234 (37%), Gaps = 43/234 (18%)
Query: 274 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL------- 326
LL P + N+G YF GD + S F ++ N+ A NY L
Sbjct: 87 LLPDVPYKYEIYNNIGACYFYIGDYKNSLHYFNLSKTENPNYKIAEKNYILLQNAISVKN 146
Query: 327 LCKYGS----------VLAGAGANTGEGACL----DQASAVNVAKECLLAALKADPKAAH 372
L K S V++ A A+ G A A+++ K A+K+DP+ +
Sbjct: 147 LEKLESTRENFPDTFLVVSSASADISTGWIYFYLGKSAEAIHLFKN----AIKSDPEYSL 202
Query: 373 IWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQEPTEQLSWA 432
+ +L Y +GD +S+ + + A K++P+ + +S D
Sbjct: 203 SYLSLGYLYDSSGDFKSAIRYYKSALKIDPDYPDVWNNLGISYYND-------------- 248
Query: 433 GNEMASILREGDPVQIEPPIAWA----GFAAVQKTHHEVAAAFETEENELSKME 482
G SI +Q+ P A+ GF +QK A + EL +E
Sbjct: 249 GQIENSISHFEKAIQLNPTFAYPVNNLGFIYIQKDDFSDAKKYFLRSIELKPLE 302
>gi|443474936|ref|ZP_21064901.1| Tetratricopeptide TPR_1 repeat-containing protein [Pseudanabaena
biceps PCC 7429]
gi|443020263|gb|ELS34241.1| Tetratricopeptide TPR_1 repeat-containing protein [Pseudanabaena
biceps PCC 7429]
Length = 303
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 56/258 (21%), Positives = 101/258 (39%), Gaps = 24/258 (9%)
Query: 186 ILLRCEADIA----RPELLSLVQIHHAQCLLPESSGDNSLDK---ELEPEELEEILSKLK 238
+++ C A+ A RP+ VQ+ + P + D L++ + LE + +
Sbjct: 13 VIMICGAEGAIAQLRPKPPQKVQVQQEIVVPPNETADQLLERGNAYVRLGNLEGAIVIFR 72
Query: 239 ESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDM 298
++Q + V LGL ++G+L+ +I +DP NLG A QSGD
Sbjct: 73 AAIQKNPELTVAHYNLGLAYAQAGKLKEAIHSFQRATRLDPKFAIAYSNLGAALLQSGDA 132
Query: 299 EQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKE 358
++ Q I D A N L K + GA AN + L+ + +
Sbjct: 133 NRAIPSLQRAISLDPKLSVAYYNLG--LALKEKKDINGAIANLNQALKLNPQAPETIYNL 190
Query: 359 CLLA---------------ALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 403
LL AL+ +P+ A + NL A + G ++ L A + +
Sbjct: 191 GLLIQTQGNITKAIAYYAKALQLNPEYAEAYYNLGAALLIQGQTENAIGQLRNALQFRKD 250
Query: 404 CMSTRYAVAVSRIKDAER 421
Y + V++++ ++
Sbjct: 251 YAEAFYTLGVAQVRAGQK 268
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 74/162 (45%), Gaps = 15/162 (9%)
Query: 151 RKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPEL-LSLVQIHHAQ 209
+K P+ AH+ LGL Y + G+ +A+ S+++A L + IA L +L+Q A
Sbjct: 76 QKNPELTVAHYNLGLAYAQAGKLKEAIHSFQRATR--LDPKFAIAYSNLGAALLQSGDAN 133
Query: 210 CLLPESSGDNSLDKEL------------EPEELEEILSKLKESMQSDTRQAVVWNTLGLI 257
+P SLD +L E +++ ++ L ++++ + + LGL+
Sbjct: 134 RAIPSLQRAISLDPKLSVAYYNLGLALKEKKDINGAIANLNQALKLNPQAPETIYNLGLL 193
Query: 258 LLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDME 299
+ G + +I+ + L ++P + NLG A G E
Sbjct: 194 IQTQGNITKAIAYYAKALQLNPEYAEAYYNLGAALLIQGQTE 235
>gi|304315338|ref|YP_003850485.1| tetratricopeptide repeat domain-containing protein
[Methanothermobacter marburgensis str. Marburg]
gi|302588797|gb|ADL59172.1| tetratricopeptide repeat domain-containing protein
[Methanothermobacter marburgensis str. Marburg]
Length = 386
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 64/307 (20%), Positives = 116/307 (37%), Gaps = 35/307 (11%)
Query: 259 LKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAA 318
LK G+ + ++ L PN+ + + + + E++ +C++ ++ + A
Sbjct: 27 LKQGKYKEALKEFRKALKASPNDPEILHYNAMTLLKLKRPEKALECYEKILKNNPKLAEA 86
Query: 319 LINYAALL--LCKYGSVLA-----------GAGANTGEGACLDQASAVNVAKECLLAALK 365
N +L L +Y L G +GA LD A EC AL+
Sbjct: 87 WNNKGVVLKELKRYDEALECYERALQIDPEDDGTWNNKGALLDTIGKPEKAIECYEKALE 146
Query: 366 ADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRY--AVAVSRIKDAERSQ 423
+ K A W N N G + + +C EKA ++ + Y A+ + +K + +
Sbjct: 147 INQKNAKAWYNKGNGLRSLGKYEEALECYEKALQINAEFVEAWYNKALILEELKRYDEAL 206
Query: 424 EPTEQLSWAGNEMASILREGDPVQIEPPI--AWAGFAAVQKTHHEVAAAFETEEN--ELS 479
E E+ +QI+P W A+ T + A E E E++
Sbjct: 207 ECYER----------------ALQIDPEDDGTWNNKGALLDTIGKPEKAIECYEKALEIN 250
Query: 480 KMEECAGAGESAFLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKC 539
+ A + L++ + A EC AL+ + + WAN G + + +C
Sbjct: 251 QKNAKAWNNKGVVLEELKRYDEALECYEKALEINLENDETWANKGVLLRKLGKYEEALEC 310
Query: 540 LEKVLMV 546
EK L +
Sbjct: 311 FEKALEI 317
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 90/239 (37%), Gaps = 44/239 (18%)
Query: 164 GLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLDK 223
G + +G+P KA+ YEKA EI +A+ + +G SL K
Sbjct: 125 GALLDTIGKPEKAIECYEKALEI-----------------NQKNAKAWYNKGNGLRSLGK 167
Query: 224 ELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCD 283
EE L ++++Q + W LIL + R ++ L +DP +
Sbjct: 168 ------YEEALECYEKALQINAEFVEAWYNKALILEELKRYDEALECYERALQIDPEDDG 221
Query: 284 CIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGE 343
N G G E++ +C++ + +Q + A N +
Sbjct: 222 TWNNKGALLDTIGKPEKAIECYEKALEINQKNAKAWNN---------------------K 260
Query: 344 GACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 402
G L++ + A EC AL+ + + WAN G + + +C EKA ++ P
Sbjct: 261 GVVLEELKRYDEALECYEKALEINLENDETWANKGVLLRKLGKYEEALECFEKALEINP 319
>gi|328784392|ref|XP_395911.4| PREDICTED: tetratricopeptide repeat protein 37-like [Apis
mellifera]
Length = 1254
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 73/172 (42%), Gaps = 26/172 (15%)
Query: 251 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSG-DMEQSAKCFQD-- 307
W LG+I + S+ + + D N C+ LG Y + G DME+S KC+Q
Sbjct: 444 WLFLGIIYWEMAEYNYSLMAFLNGIKADRYNWKCLVYLGHYYREYGNDMERSRKCYQSAL 503
Query: 308 -----------------LILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQA 350
+LK+Q+ L+ +L GS A G LDQ
Sbjct: 504 QINPNSEEAGIGLSTAYRLLKNQDANIKLLQ----VLTVQGSGPRWAWLQLGLQY-LDQG 558
Query: 351 SAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 402
+A K ++ DP +H W +LA+AY++ G + S+ K ++ +L P
Sbjct: 559 NAEQAIK-AFQHVIRVDPNDSHCWESLADAYFIRGAYTSALKSYQRVLELCP 609
>gi|311747683|ref|ZP_07721468.1| hypothetical protein ALPR1_15169 [Algoriphagus sp. PR1]
gi|126575671|gb|EAZ79981.1| hypothetical protein ALPR1_15169 [Algoriphagus sp. PR1]
Length = 315
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 101/215 (46%), Gaps = 22/215 (10%)
Query: 121 ADGDQSGLGTSSSSREEKVSSLKTGLVHVARKM--------PKNAHAHFLLGLMYQRLGQ 172
+DG Q + S + ++ L G + AR+ K+ ++FL GL+ ++L
Sbjct: 89 SDGIQVNQSSFESYFQRGLAYLDNGEFYKAREDAQQLVQMDSKSWKSYFLTGLVEEKLNN 148
Query: 173 PLKAVSSYEKAEEI------LLRCEADIARPELLS---LVQIHHAQCLLPESSGDNSLDK 223
+A++S+EKA E+ LL +A + E S L+ + A+ + P ++L
Sbjct: 149 YPQALASFEKAVELDPTNSDLLVNQATLLYYEQKSEEALIILDKAEEVNPAEPNLHNLRS 208
Query: 224 --ELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNN 281
+ E +E L + +++ + QA +N GL ++ +G L+ + +++ + ++ NN
Sbjct: 209 MIYFDRESYQEALDAVNKAIALNNTQAYFYNNKGLYMMFTGDLEGGLDLVNQSIKMNENN 268
Query: 282 CDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHP 316
+ N GI Y +GD Q L ++N+P
Sbjct: 269 PYALRNKGIYYVLTGD---KVTALQYLAELNENYP 300
>gi|386827305|ref|ZP_10114412.1| tetratricopeptide repeat protein,tetratricopeptide repeat
protein,sulfotransferase family protein [Beggiatoa alba
B18LD]
gi|386428189|gb|EIJ42017.1| tetratricopeptide repeat protein,tetratricopeptide repeat
protein,sulfotransferase family protein [Beggiatoa alba
B18LD]
Length = 561
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 85/194 (43%), Gaps = 31/194 (15%)
Query: 232 EILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIA 291
E + LK+++ + + +A+ N LG +L + G + +I+ + L PN+ + + NL
Sbjct: 62 EAIKLLKKAIANKSDEAIYHNNLGNLLNEQGNIAQAITAYRAALRHKPNHLNALYNLACL 121
Query: 292 YFQSGDMEQSAKCFQDLI-LKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQA 350
+ GD + + +C + L+ L Q+ A A G+CL +
Sbjct: 122 LEKQGDYDGATQCLRHLVKLAPQD----------------------AQAWNQLGSCLLED 159
Query: 351 SAVNVAKE---CLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 407
N + E C A++ P A W NL AY +G+ +++ C +A + P
Sbjct: 160 WRYNHSAEAIACYQKAVQYQPNYADAWNNLGIAYMDSGNSQTAIDCYRQALRCNP----- 214
Query: 408 RYAVAVSRIKDAER 421
+YA A + A++
Sbjct: 215 QYARAYENLARAKK 228
>gi|313680127|ref|YP_004057866.1| tetratricopeptide tpr_1 repeat-containing protein [Oceanithermus
profundus DSM 14977]
gi|313152842|gb|ADR36693.1| Tetratricopeptide TPR_1 repeat-containing protein [Oceanithermus
profundus DSM 14977]
Length = 364
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 101/251 (40%), Gaps = 33/251 (13%)
Query: 152 KMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCL 211
K P N +A + LG ++ Q A+ + ++A + + A P ++L Q + + L
Sbjct: 65 KEPNNVYALYGLGRTQLKMHQFTAAIENLKRA----IAIDGSYA-PLYVALAQAYTDRYL 119
Query: 212 LPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVL 271
E DK + L++ L L ++ D ++N GL+ G L + +
Sbjct: 120 YAE-------DKTAAEKFLDQALLILDDARTIDPNYHAIYNQRGLVYQYKGELDKAEAAF 172
Query: 272 SSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYG 331
LA+ P++ NL Y G ++++ + D PA +A L YG
Sbjct: 173 KQALAIAPDDAVVRYNLAQVYLSQGKLDEALDMLAQGVALD---PA-----SAQLQLLYG 224
Query: 332 SVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSG 391
VLA G + A++ L A + P A W NL YYL +
Sbjct: 225 KVLAVKG-------------RLVEAEQALAKATELAPLNASTWLNLGQVYYLEKKFAEAI 271
Query: 392 KCLEKAAKLEP 402
L+KA +L+P
Sbjct: 272 DTLDKAIELDP 282
>gi|427708392|ref|YP_007050769.1| hypothetical protein Nos7107_3027 [Nostoc sp. PCC 7107]
gi|427360897|gb|AFY43619.1| Tetratricopeptide TPR_1 repeat-containing protein [Nostoc sp. PCC
7107]
Length = 308
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 74/179 (41%), Gaps = 21/179 (11%)
Query: 242 QSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQS 301
QS + AV W GL +++GR+Q +I+ + +DP NLG+AY Q+G ++ +
Sbjct: 41 QSVNQAAVDWLNQGLQSIQAGRIQDAIASFQKAIQLDPKLAAGYYNLGLAYRQTGQLKPA 100
Query: 302 AKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLL 361
A F D S A A AN G GA L+ + + A + L
Sbjct: 101 ADAFYQATQAD-------------------SQFAPAFANLG-GALLE-GNNIQQANDYLQ 139
Query: 362 AALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAE 420
A++ DPK NL D + +KAA+ N Y + + ++ +
Sbjct: 140 RAIELDPKLGFAHYNLGLVQQQQQDWERAIASFKKAAEYSQNAPEPHYHLGICYLQQGK 198
Score = 38.9 bits (89), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 40/196 (20%), Positives = 75/196 (38%), Gaps = 22/196 (11%)
Query: 237 LKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSG 296
++ Q+D++ A + LG LL+ +Q + L + +DP NLG+ Q
Sbjct: 104 FYQATQADSQFAPAFANLGGALLEGNNIQQANDYLQRAIELDPKLGFAHYNLGLVQQQQQ 163
Query: 297 DMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVA 356
D E++ F+ QN P + G C Q ++ A
Sbjct: 164 DWERAIASFKKAAEYSQNAPE---------------------PHYHLGICYLQQGKLDKA 202
Query: 357 KECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRI 416
K A+K +PK NL +++ + + K+A+ N + Y + +
Sbjct: 203 KNAFRQAIKINPKYTEAHYNLGTIWFVQNKLKEALAAFRKSAEANSNYPNAYYGAGLVFM 262
Query: 417 KDAERSQEPTEQLSWA 432
+ ++ E T+ L +A
Sbjct: 263 QQ-KKYAEATQVLQYA 277
>gi|449125251|ref|ZP_21761553.1| hypothetical protein HMPREF9723_01597 [Treponema denticola OTK]
gi|448939220|gb|EMB20137.1| hypothetical protein HMPREF9723_01597 [Treponema denticola OTK]
Length = 372
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 65/163 (39%), Gaps = 21/163 (12%)
Query: 250 VWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLI 309
+ N +G+I + SI +L A+D N + NLG Y Q+GD + + +CF D++
Sbjct: 79 ILNNMGVIYRRLNMFNESIVILEKAKAIDSKNETTLYNLGNTYKQNGDYKHAIQCFTDVL 138
Query: 310 LKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPK 369
P + Y L GSV C D A+ K LK DP
Sbjct: 139 ---DIKPDDALAYNHL-----GSVYF---------LCKDYPKALETYK----IGLKVDPN 177
Query: 370 AAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVA 412
+ NLA Y ++ + + A K +PN A+A
Sbjct: 178 HPFLNFNLAELYKEEKHYKEAINSYQTAMKTKPNWYEALAAIA 220
>gi|326430069|gb|EGD75639.1| TPR repeat-containing protein [Salpingoeca sp. ATCC 50818]
Length = 598
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 110/274 (40%), Gaps = 30/274 (10%)
Query: 149 VARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHA 208
+ K P A+ + LGL Y G+ KA++ YEKA I + + P S Q ++
Sbjct: 200 LGEKHPSTANTYGNLGLAYYSKGEYDKAIAFYEKALAIRVETLGE-KHP---STAQTYNN 255
Query: 209 QCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSI 268
+ S GD DK + E + + K++ A+ +N LG+ G +I
Sbjct: 256 LGIAYHSKGD--YDKAIAYHE-KALAIKVETLGAKHPSTAITYNNLGIAFKNKGDYDRAI 312
Query: 269 SVLSSLLAVD--------PNNCDCIGNLGIAYFQSGDMEQSAKCFQ-DLILK----DQNH 315
+ LA+ P+ NLGIA+ GD +++ ++ DL + + H
Sbjct: 313 AFYEKDLAITVEALGEKHPSTAQTYNNLGIAFKNKGDYDRAIAFYEKDLAITVETLGEKH 372
Query: 316 PAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWA 375
P+ Y L GS G A ++A A+ A + P A +
Sbjct: 373 PSTASTYNNL-----GSAYYSKGEYDRAIALYEKALAITAE-----ALGEKHPSTAQTYN 422
Query: 376 NLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRY 409
NL AY G++ + + E+A ++ + ++
Sbjct: 423 NLGAAYADKGEYDKAVEVYEQALAIKVEALGEKH 456
Score = 42.4 bits (98), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 101/251 (40%), Gaps = 38/251 (15%)
Query: 163 LGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLD 222
+GL+ ++ G+ +A++ YE A + LR E + R ++ +++ + G+ D
Sbjct: 130 VGLVLKQFGEHDRAIAYYETALAVYLRTEGEKGR----NVAALYNNLGIAYSDKGE--YD 183
Query: 223 KELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAV----- 277
K + E + + K++ + A + LGL G +I+ LA+
Sbjct: 184 KAIVFYE-KALAIKVETLGEKHPSTANTYGNLGLAYYSKGEYDKAIAFYEKALAIRVETL 242
Query: 278 ---DPNNCDCIGNLGIAYFQSGDMEQSAKCFQD-LILKDQN----HPAALINYAALLLCK 329
P+ NLGIAY GD +++ + L +K + HP+ I Y L +
Sbjct: 243 GEKHPSTAQTYNNLGIAYHSKGDYDKAIAYHEKALAIKVETLGAKHPSTAITYNNLGI-- 300
Query: 330 YGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKA----DPKAAHIWANLANAYYLTG 385
A N G D A+ ++ L ++A P A + NL A+ G
Sbjct: 301 -------AFKNKG-----DYDRAIAFYEKDLAITVEALGEKHPSTAQTYNNLGIAFKNKG 348
Query: 386 DHRSSGKCLEK 396
D+ + EK
Sbjct: 349 DYDRAIAFYEK 359
>gi|218190772|gb|EEC73199.1| hypothetical protein OsI_07263 [Oryza sativa Indica Group]
Length = 1004
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 67/174 (38%), Gaps = 37/174 (21%)
Query: 254 LGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQ 313
LG I + I+ LA+DPN +C GN+ A+ + GD++ + + + I
Sbjct: 118 LGAIYYQIRNYDMCIAKNEEALAIDPNFAECYGNMANAWKEKGDVDLAIRYYLTAIQLRP 177
Query: 314 NHPAALINYAALLLCKYGSVLAGAGANTGE----GACLDQASAVNV-------------- 355
N C S LA A G C QA A+N
Sbjct: 178 N------------FCDAWSNLASAYTRKGRLNEAAQCCRQALAINPRLVDAHSNLGNLMK 225
Query: 356 -------AKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 402
A C + AL+ DP+ A W+NLA + GD + ++A KL+P
Sbjct: 226 AQGFIQEAYNCYIEALRIDPQFAIAWSNLAGLFMEAGDLDKALLYYKEAVKLKP 279
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 86/203 (42%), Gaps = 16/203 (7%)
Query: 231 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 290
+E + + ++Q+ A+ + L I + G+L +I + + DP + N+G
Sbjct: 299 QEAIISYQRAVQARPDYAMAYGNLATIYYEQGQLDIAIRCYNQAIICDPQFVEAYNNMGN 358
Query: 291 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGA-------GANTGE 343
A +G +E++ C++ + NHP AL N + + ++ + A A +G
Sbjct: 359 ALKDAGRVEEAINCYRSCLALQANHPQALTNLGNIYM-EWNLISAAASFYKAAISVTSGL 417
Query: 344 GACLDQASAV-----NVAK--ECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEK 396
+ L+ + + N A C L+ DP AA N N + G + + +
Sbjct: 418 SSPLNNLAVIYKQQGNYADAITCYTEVLRVDPTAADALVNRGNTFKEIGRVNEAIQDYIQ 477
Query: 397 AAKLEPNCMSTRYAVAVSRIKDA 419
AA + P M+ +A S KD+
Sbjct: 478 AATIRPT-MAEAHANLASAYKDS 499
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 112/268 (41%), Gaps = 46/268 (17%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELL----SLVQIHHAQ 209
P A A+ G +Y+ +G +A+ SY++A + ARP+ +L I++ Q
Sbjct: 279 PSFADAYLNQGNVYKTMGMSQEAIISYQRAVQ---------ARPDYAMAYGNLATIYYEQ 329
Query: 210 CLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSIS 269
+L+ + +++ D + +N +G L +GR++ +I+
Sbjct: 330 ------------------GQLDIAIRCYNQAIICDPQFVEAYNNMGNALKDAGRVEEAIN 371
Query: 270 VLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLI-----LKDQNHPAALI---- 320
S LA+ N+ + NLG Y + + +A ++ I L + A+I
Sbjct: 372 CYRSCLALQANHPQALTNLGNIYMEWNLISAAASFYKAAISVTSGLSSPLNNLAVIYKQQ 431
Query: 321 -NYAALLLCKYGSVL----AGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWA 375
NYA + C Y VL A A G + VN A + + A P A A
Sbjct: 432 GNYADAITC-YTEVLRVDPTAADALVNRGNTFKEIGRVNEAIQDYIQAATIRPTMAEAHA 490
Query: 376 NLANAYYLTGDHRSSGKCLEKAAKLEPN 403
NLA+AY +G ++ ++A +L P+
Sbjct: 491 NLASAYKDSGHVETAIVSYKQALRLRPD 518
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 65/299 (21%), Positives = 114/299 (38%), Gaps = 41/299 (13%)
Query: 251 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 310
W+ L + GRL + LA++P D NLG G ++++ C+ + +
Sbjct: 183 WSNLASAYTRKGRLNEAAQCCRQALAINPRLVDAHSNLGNLMKAQGFIQEAYNCYIEALR 242
Query: 311 KDQNHPAALINYAALLL---------------CKYGSVLAGAGANTGEGACLDQASAVNV 355
D A N A L + K A A N G + + +
Sbjct: 243 IDPQFAIAWSNLAGLFMEAGDLDKALLYYKEAVKLKPSFADAYLNQG-----NVYKTMGM 297
Query: 356 AKECLLA---ALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVA 412
++E +++ A++A P A + NLA YY G + +C +A +P + Y
Sbjct: 298 SQEAIISYQRAVQARPDYAMAYGNLATIYYEQGQLDIAIRCYNQAIICDPQFVEA-YNNM 356
Query: 413 VSRIKDAERSQEPTE----QLSWAGNEMASILREGDPVQIEPPIAWAGFAAVQKTHHEVA 468
+ +KDA R +E L+ N ++ G+ + +E + A A+ K V
Sbjct: 357 GNALKDAGRVEEAINCYRSCLALQANHPQALTNLGN-IYMEWNLISAA-ASFYKAAISVT 414
Query: 469 AAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKADPKAAHIWANLANAY 527
+ + N L+ + + G + A A+ C L+ DP AA N N +
Sbjct: 415 SGLSSPLNNLAVIYKQQG-------NYADAIT----CYTEVLRVDPTAADALVNRGNTF 462
>gi|220927089|ref|YP_002502391.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium
nodulans ORS 2060]
gi|219951696|gb|ACL62088.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium
nodulans ORS 2060]
Length = 988
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 76/389 (19%), Positives = 138/389 (35%), Gaps = 60/389 (15%)
Query: 148 HVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHH 207
V R PKN A+ G YQ G+ +A++ Y++A +Q++
Sbjct: 85 QVLRLNPKNVIAYNNRGFAYQSKGEYDRAIADYDQA-------------------LQLNP 125
Query: 208 AQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSS 267
+ + GD K E + ++ ++++ + + +N GL+ G +
Sbjct: 126 KYAIAYRNRGDVFRSKG----EHDRAIADYSQALRFNPKYIFAYNNRGLVFQSKGEYDRA 181
Query: 268 ISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLL 327
I+ L +DP N G+A+ + +++ F + D + A N
Sbjct: 182 IADFDQALRLDPKYVVAYNNRGLAFQSKREYDRAIADFDQALRLDSKYKFAYNN------ 235
Query: 328 CKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDH 387
G G + A DQ AL+ DPK + N +A+ G++
Sbjct: 236 --RGLTFQSKGEHDRAIADFDQ-------------ALRLDPKYTFAYRNRGDAFRSKGEY 280
Query: 388 RSSGKCLEKAAKLEPNCM--STRYAVAVSRIKDAERSQEPTEQ-LSWAGNEMASILREGD 444
+ ++A L+P T A A +D +R+ +Q L +A+ GD
Sbjct: 281 DRAIADYDQALLLDPKYTFAYTARAFAFQSKRDYDRALADYDQALRLDPKSVAAYRNRGD 340
Query: 445 PVQIEPPIAWAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKE 504
+ K ++ A A E L + A + N+A
Sbjct: 341 FFR-------------SKGDYDRAIADYDEALRLDPKNKLAYNNRGLVFQSKNEYNLAIA 387
Query: 505 CLLAALKADPKAAHIWANLANAYYLTGDH 533
AL DPK A I+ N + + G++
Sbjct: 388 DFDQALLIDPKDAVIYRNRGDVFRSKGEY 416
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 58/280 (20%), Positives = 109/280 (38%), Gaps = 24/280 (8%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKA------EEILLRCEADIARPE---LLSLVQ 204
PKN A+ GL++Q + A++ +++A + ++ R D+ R + ++
Sbjct: 363 PKNKLAYNNRGLVFQSKNEYNLAIADFDQALLIDPKDAVIYRNRGDVFRSKGEYDRAIAN 422
Query: 205 IHHAQCLLPESSG--DNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSG 262
A L P+ + +N E + L+ +S+Q D +QAVV+ G + G
Sbjct: 423 YDQALQLDPKYAAVHNNRGLAFYRKGEYDRALADYDQSLQLDPKQAVVYTNRGDVFRIKG 482
Query: 263 RLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINY 322
+I+ L +DP N G+ + G+ ++ + + D + A N
Sbjct: 483 EHDRAIADYDQALRLDPKYIFAYNNRGLVFQNKGEYNRAILDYDQTLRLDPKYAIAYANR 542
Query: 323 AALLLCK--YGSVLAGAG-----------ANTGEGACLDQASAVNVAKECLLAALKADPK 369
K Y +A A G G + + A AL+ DPK
Sbjct: 543 GDTFQSKGEYDRAIADYDQALQHNPKYVIAYNGRGLAFYRKGEHDRAIADYEEALRLDPK 602
Query: 370 AAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRY 409
+A + N A G++ + L++A +L+P + Y
Sbjct: 603 SAAAFNNRGAALNKKGEYDRAIADLDQALRLKPGFTNPHY 642
Score = 43.1 bits (100), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 60/312 (19%), Positives = 120/312 (38%), Gaps = 49/312 (15%)
Query: 110 KMDSALEFGVDADGDQSGLGTSSSSREEK-VSSLKTGLVHVARKMPKNAHAHFLLGLMYQ 168
++DS +F + GL S ++ ++ L R PK A+ G ++
Sbjct: 224 RLDSKYKFAYN----NRGLTFQSKGEHDRAIADFDQAL----RLDPKYTFAYRNRGDAFR 275
Query: 169 RLGQPLKAVSSYEKAEEILLRCEADIA-----------RPELLSLVQIHHAQCLLPES-- 215
G+ +A++ Y++A +LL + A R +L A L P+S
Sbjct: 276 SKGEYDRAIADYDQA--LLLDPKYTFAYTARAFAFQSKRDYDRALADYDQALRLDPKSVA 333
Query: 216 SGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLL 275
+ N D + + ++ E+++ D + + +N GL+ +I+ L
Sbjct: 334 AYRNRGDFFRSKGDYDRAIADYDEALRLDPKNKLAYNNRGLVFQSKNEYNLAIADFDQAL 393
Query: 276 AVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINY--AALLLCKYGSV 333
+DP + N G + G+ ++ A+ NY A L KY +V
Sbjct: 394 LIDPKDAVIYRNRGDVFRSKGEYDR-----------------AIANYDQALQLDPKYAAV 436
Query: 334 LAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKC 393
+ G + + A +L+ DPK A ++ N + + + G+H +
Sbjct: 437 ------HNNRGLAFYRKGEYDRALADYDQSLQLDPKQAVVYTNRGDVFRIKGEHDRAIAD 490
Query: 394 LEKAAKLEPNCM 405
++A +L+P +
Sbjct: 491 YDQALRLDPKYI 502
>gi|428214019|ref|YP_007087163.1| glycosyl transferase group 1,tetratricopeptide repeat
protein,tetratricopeptide repeat protein [Oscillatoria
acuminata PCC 6304]
gi|428002400|gb|AFY83243.1| glycosyl transferase group 1,tetratricopeptide repeat
protein,tetratricopeptide repeat protein [Oscillatoria
acuminata PCC 6304]
Length = 2510
Score = 50.1 bits (118), Expect = 0.003, Method: Composition-based stats.
Identities = 47/185 (25%), Positives = 87/185 (47%), Gaps = 11/185 (5%)
Query: 133 SSREEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKA-----EEIL 187
S +E +++ + V ++P + A LG++ + G +AV+ Y +A +E+
Sbjct: 605 SHQEGNLTAAERLYRQVLAEIPNHPVALTNLGMLLKAEGNCQEAVTCYHRALPYAPQEVG 664
Query: 188 LRCEADIARPEL----LSLVQIHHAQCLLPES-SGDNSLDKEL-EPEELEEILSKLKESM 241
L A EL ++ Q H L P G N+L L E ELE + ++++
Sbjct: 665 LHYNLGNALWELGNRFAAIAQFHRVIVLQPNHVEGYNNLGMVLHELGELEPAIPHFEQAI 724
Query: 242 QSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQS 301
+ A +N LGL+L GR++ +I+ ++ L + PN + N GIA G++ Q
Sbjct: 725 TLNPNYAQGYNNLGLVLQDLGRVEEAIACYNTALRLQPNYAEAHNNRGIALLIQGNLRQG 784
Query: 302 AKCFQ 306
+ ++
Sbjct: 785 FRDYE 789
Score = 40.8 bits (94), Expect = 2.0, Method: Composition-based stats.
Identities = 41/188 (21%), Positives = 75/188 (39%), Gaps = 24/188 (12%)
Query: 238 KESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGD 297
K+++ +D R + LG L GR +IS L+ +AVD + NLG A G+
Sbjct: 1136 KQAIVADCRYLPAYINLGATLRSLGRTSEAISYLAQAIAVDSHCLAAHYNLGNALSDEGN 1195
Query: 298 MEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAK 357
+++ ++ +I D +H A + G+ L G T A + +A+A+
Sbjct: 1196 FQEATAHYRQVIALDAHHSQAHYH--------LGNALKELGNVTEAIAQIQEATAL---- 1243
Query: 358 ECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIK 417
DP L N + G + C ++A L+ + + + ++
Sbjct: 1244 ---------DPNYTEAHNTLGNLFLKAGRITEAMACFQRATALDSQYIDAQINLGIAL-- 1292
Query: 418 DAERSQEP 425
E+ Q P
Sbjct: 1293 -QEQHQTP 1299
Score = 40.8 bits (94), Expect = 2.1, Method: Composition-based stats.
Identities = 57/254 (22%), Positives = 92/254 (36%), Gaps = 42/254 (16%)
Query: 151 RKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIAR----PELLSLVQIH 206
R+ P A LLG + + G+ AV Y++A I+ C A L SL +
Sbjct: 1106 RQSPNQAQGWQLLGAIAHQGGKLNTAVGYYKQA--IVADCRYLPAYINLGATLRSLGRTS 1163
Query: 207 HA------------QCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTL 254
A CL + N+L E +E + ++ + D + L
Sbjct: 1164 EAISYLAQAIAVDSHCLAAHYNLGNALSDE---GNFQEATAHYRQVIALDAHHSQAHYHL 1220
Query: 255 GLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQN 314
G L + G + +I+ + A+DPN + LG + ++G + ++ CFQ D
Sbjct: 1221 GNALKELGNVTEAIAQIQEATALDPNYTEAHNTLGNLFLKAGRITEAMACFQRATALDSQ 1280
Query: 315 HPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIW 374
+ A IN G L + A AL+ P +A
Sbjct: 1281 YIDAQINL---------------------GIALQEQHQTPAAIGTYHRALQIQPDSAEAH 1319
Query: 375 ANLANAYYLTGDHR 388
NLA + + GD R
Sbjct: 1320 LNLALSLLIAGDLR 1333
>gi|118375735|ref|XP_001021051.1| TPR Domain containing protein [Tetrahymena thermophila]
gi|89302818|gb|EAS00806.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
Length = 443
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 94/224 (41%), Gaps = 27/224 (12%)
Query: 225 LEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDC 284
L ++ +E + L+E+++ + N LGL SG LQ ++++ L+ DPNN +
Sbjct: 61 LHLKQYKEAIQHLEEAVKLNKLDYGAQNNLGLAYASSGDLQKALNIFEDLVKKDPNNLEV 120
Query: 285 IGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLC---------------K 329
N +A ++ +++ DLI +Q + A Y L+ C +
Sbjct: 121 FFNKAVALIENKKFDEAILILMDLI--NQKYEKA---YFKLVDCFVSLNKREEAMKYLQQ 175
Query: 330 YGSVLAGAGANT---GEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGD 386
Y + +G T GE A V+ A EC A++ DPK + L YY
Sbjct: 176 YYQINSGDSQKTYLLGEKAI--DIQEVDYAVECFEKAVQLDPKHQNACLFLGMTYYNKKM 233
Query: 387 HRSSGKCLEKAAKLEPNCMSTRYAVAVSRI--KDAERSQEPTEQ 428
+ S K +++ P + + + + K+ E++ + EQ
Sbjct: 234 YEKSIHYYLKTSEINPKNFTCLNGLGIVYLEQKEYEKALQYFEQ 277
Score = 45.1 bits (105), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 42/78 (53%)
Query: 250 VWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLI 309
V+N LGL L + + +I L + ++ + NLG+AY SGD++++ F+DL+
Sbjct: 52 VYNNLGLACLHLKQYKEAIQHLEEAVKLNKLDYGAQNNLGLAYASSGDLQKALNIFEDLV 111
Query: 310 LKDQNHPAALINYAALLL 327
KD N+ N A L+
Sbjct: 112 KKDPNNLEVFFNKAVALI 129
>gi|392374236|ref|YP_003206069.1| hypothetical protein DAMO_1174 [Candidatus Methylomirabilis
oxyfera]
gi|258591929|emb|CBE68234.1| protein of unknown function [Candidatus Methylomirabilis oxyfera]
Length = 352
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 78/190 (41%), Gaps = 20/190 (10%)
Query: 231 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 290
+++ ++LK D V WN LG++ K GR +I+ L + + P + D NLG
Sbjct: 82 DQVGTELKAKADQDGADFVSWNLLGVLYAKQGRWAEAIAALERTVQIQPADVDAWTNLG- 140
Query: 291 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQA 350
+ S +++QS K + A L YG AG G +
Sbjct: 141 --WLSSELKQSQKAREAF------------RRALALDSAYGRAHAGLA-----GLYAETE 181
Query: 351 SAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYA 410
+ A E AL A+P + ++ YY G + K L +A+ L P+ + R
Sbjct: 182 GEYDKAIEEYRLALAAEPGNSDYLYDMGWVYYRKGMTDDALKILTEASTLSPDDPAGRTK 241
Query: 411 VAVSRIKDAE 420
+ +R++ E
Sbjct: 242 IGWARLRRKE 251
>gi|440752107|ref|ZP_20931310.1| tetratricopeptide repeat family protein [Microcystis aeruginosa
TAIHU98]
gi|440176600|gb|ELP55873.1| tetratricopeptide repeat family protein [Microcystis aeruginosa
TAIHU98]
Length = 1254
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 61/303 (20%), Positives = 115/303 (37%), Gaps = 46/303 (15%)
Query: 138 KVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARP 197
++ S K + + P A ++ LG + + GQ +A+S Y++A E ++P
Sbjct: 996 ELESAKNFYLQAIKVDPTYAKSYHNLGFLAAQQGQLEEAISYYQQAIE---------SQP 1046
Query: 198 ELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLI 257
+ P + + L E + +E E+ ++ S+Q D+ V+ +L +
Sbjct: 1047 DY-------------PSAFYNLGLVYE-QLKETEKAIACYSHSVQLDSTNVEVYKSLAQL 1092
Query: 258 LLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPA 317
+ + L + P+N + NLG+ ++ +++ CFQ +I Q P
Sbjct: 1093 YDRQENYAKAEKYYRCALLLQPHNLELRYNLGVVLYEQEKFDKAVSCFQKII---QAKPQ 1149
Query: 318 ALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANL 377
I Y L G Q + AK C A++ DP A + NL
Sbjct: 1150 DAIAYLHL------------------GISYKQQKLLTKAKSCFEKAIELDPDYAMAYYNL 1191
Query: 378 ANAYYLTGDHRSSGKCLEKAAKLEP--NCMSTRYAVAVSRIKDAERSQEPTEQLSWAGNE 435
Y D + + C ++ + +P T A+S IK + W N+
Sbjct: 1192 GVVYSCQPDEKKAVDCFRQSLRCDPANKLAHTALLFALSGIKQVSSEEIYDASSRWYRNK 1251
Query: 436 MAS 438
+ +
Sbjct: 1252 IQT 1254
Score = 40.4 bits (93), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 35/166 (21%), Positives = 63/166 (37%), Gaps = 21/166 (12%)
Query: 248 AVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQD 307
A ++ LG +G L+S+ + + VDP NLG Q G +E++ +Q
Sbjct: 981 AAYYHQLGREKTLTGELESAKNFYLQAIKVDPTYAKSYHNLGFLAAQQGQLEEAISYYQQ 1040
Query: 308 LILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKAD 367
I ++P+A N G +Q A C +++ D
Sbjct: 1041 AIESQPDYPSAFYNL---------------------GLVYEQLKETEKAIACYSHSVQLD 1079
Query: 368 PKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAV 413
++ +LA Y ++ + K A L+P+ + RY + V
Sbjct: 1080 STNVEVYKSLAQLYDRQENYAKAEKYYRCALLLQPHNLELRYNLGV 1125
Score = 38.9 bits (89), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 91/217 (41%), Gaps = 30/217 (13%)
Query: 128 LGTSSSSREEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEIL 187
L EE +S + + P A + LGL+Y++L + KA++ Y + ++
Sbjct: 1024 LAAQQGQLEEAISYYQQAI----ESQPDYPSAFYNLGLVYEQLKETEKAIACYSHSVQL- 1078
Query: 188 LRCEADIARPELL-SLVQIH-----------HAQCLLPESSGDNSLDKEL-----EPEEL 230
D E+ SL Q++ + +C L + L L E E+
Sbjct: 1079 -----DSTNVEVYKSLAQLYDRQENYAKAEKYYRCALLLQPHNLELRYNLGVVLYEQEKF 1133
Query: 231 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 290
++ +S ++ +Q+ + A+ + LG+ + L + S + +DP+ NLG+
Sbjct: 1134 DKAVSCFQKIIQAKPQDAIAYLHLGISYKQQKLLTKAKSCFEKAIELDPDYAMAYYNLGV 1193
Query: 291 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLL 327
Y D +++ CF+ + D PA + + ALL
Sbjct: 1194 VYSCQPDEKKAVDCFRQSLRCD---PANKLAHTALLF 1227
>gi|293334567|ref|NP_001167956.1| uncharacterized protein LOC100381672 [Zea mays]
gi|223945123|gb|ACN26645.1| unknown [Zea mays]
Length = 1009
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 79/195 (40%), Gaps = 14/195 (7%)
Query: 238 KESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGD 297
+ ++Q+ A+ + L I + G+L +I + + DP + N+G A +G
Sbjct: 313 QRALQARPDYAMAYGNLATIYYEQGQLDMAIRCYNQAIVYDPQFIEAYNNMGNALKDAGR 372
Query: 298 MEQSAKCFQDLILKDQNHPAALINYAALLL------CKYGSVLAGAGANTGEGACLDQAS 351
+E++ C++ + NHP AL N + + A +G + L+ +
Sbjct: 373 VEEAINCYRSCLALQANHPQALTNLGNIYMEWNMISAATSFYKAAISVTSGLSSPLNNLA 432
Query: 352 AV-----NVAK--ECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNC 404
+ N A C L+ DP AA N N + G + + +AA + PN
Sbjct: 433 VIYKQQGNYADAITCYTEVLRIDPTAADALVNRGNTFKEIGRVNEAIQDYVQAATIRPN- 491
Query: 405 MSTRYAVAVSRIKDA 419
M +A S KD+
Sbjct: 492 MPEAHANLASAYKDS 506
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 71/169 (42%), Gaps = 21/169 (12%)
Query: 234 LSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYF 293
++K +E++ D A + + + G + +I + + + PN CD NL AY
Sbjct: 139 IAKNEEALAIDPHFAECYGNMANAWKEKGDIDLAIRYYLTAIQLRPNFCDAWSNLASAYT 198
Query: 294 QSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAV 353
+ G + ++A+C + A IN L A +N G + +
Sbjct: 199 RKGRLNEAAQCCRQ---------ALAIN----------PRLVDAHSNLGN--LMKAQGFI 237
Query: 354 NVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 402
A C + AL+ DP A W+NLA + GD + ++A KL+P
Sbjct: 238 QEAYSCYIEALRIDPHFAIAWSNLAGLFMEAGDLDKALMYYKEAVKLKP 286
Score = 43.1 bits (100), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 60/292 (20%), Positives = 108/292 (36%), Gaps = 65/292 (22%)
Query: 254 LGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQ 313
LG I + I+ LA+DP+ +C GN+ A+ + GD++ + + + I
Sbjct: 125 LGAIYYQIRNYDMCIAKNEEALAIDPHFAECYGNMANAWKEKGDIDLAIRYYLTAIQLRP 184
Query: 314 NHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHI 373
N C S LA A G +N A +C AL +P+
Sbjct: 185 N------------FCDAWSNLASAYTRKGR---------LNEAAQCCRQALAINPRLVDA 223
Query: 374 WANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQEPTEQLSWAG 433
+NL N G + + C +A +++P+ +A+A S + AG
Sbjct: 224 HSNLGNLMKAQGFIQEAYSCYIEALRIDPH-----FAIAWSNLAGL---------FMEAG 269
Query: 434 NEMASILREGDPVQIEPPIAWAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFL 493
+ +++ + V+++P A A+ + N + G + A +
Sbjct: 270 DLDKALMYYKEAVKLKP---------------SFADAYLNQGNVYKAL----GMPQDAIM 310
Query: 494 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKVLM 545
C AL+A P A + NLA YY G + +C + ++
Sbjct: 311 -----------CYQRALQARPDYAMAYGNLATIYYEQGQLDMAIRCYNQAIV 351
Score = 41.6 bits (96), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 79/197 (40%), Gaps = 31/197 (15%)
Query: 236 KLKESMQSDTRQAVVWN--------TLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 287
+L E+ Q RQA+ N LG ++ G +Q + S L +DP+ N
Sbjct: 202 RLNEAAQC-CRQALAINPRLVDAHSNLGNLMKAQGFIQEAYSCYIEALRIDPHFAIAWSN 260
Query: 288 LGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL 347
L + ++GD++++ +++ + + A +N G+V G
Sbjct: 261 LAGLFMEAGDLDKALMYYKEAVKLKPSFADAYLN--------QGNVYKALGMPQD----- 307
Query: 348 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 407
A C AL+A P A + NLA YY G + +C +A +P +
Sbjct: 308 --------AIMCYQRALQARPDYAMAYGNLATIYYEQGQLDMAIRCYNQAIVYDPQFIEA 359
Query: 408 RYAVAVSRIKDAERSQE 424
Y + +KDA R +E
Sbjct: 360 -YNNMGNALKDAGRVEE 375
Score = 38.9 bits (89), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 56/272 (20%), Positives = 108/272 (39%), Gaps = 54/272 (19%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELL----SLVQIHHAQ 209
P A A+ G +Y+ LG P A+ Y++A + ARP+ +L I++ Q
Sbjct: 286 PSFADAYLNQGNVYKALGMPQDAIMCYQRALQ---------ARPDYAMAYGNLATIYYEQ 336
Query: 210 CLLPESSGDNSLDKELEPEELE---EILSKLKES---------------MQSDTRQAVVW 251
L + + +P+ +E + + LK++ +Q++ QA+
Sbjct: 337 GQLDMAIRCYNQAIVYDPQFIEAYNNMGNALKDAGRVEEAINCYRSCLALQANHPQALT- 395
Query: 252 NTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILK 311
LG I ++ + ++ S + ++V + NL + Y Q G+ + C+ +++
Sbjct: 396 -NLGNIYMEWNMISAATSFYKAAISVTSGLSSPLNNLAVIYKQQGNYADAITCYTEVLRI 454
Query: 312 DQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAA 371
D AL+N G + VN A + + A P
Sbjct: 455 DPTAADALVN---------------------RGNTFKEIGRVNEAIQDYVQAATIRPNMP 493
Query: 372 HIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 403
ANLA+AY +G ++ ++A +L P+
Sbjct: 494 EAHANLASAYKDSGHVETAIISYKQALRLRPD 525
>gi|359789328|ref|ZP_09292277.1| TPR repeat-containing protein [Mesorhizobium alhagi CCNWXJ12-2]
gi|359254819|gb|EHK57790.1| TPR repeat-containing protein [Mesorhizobium alhagi CCNWXJ12-2]
Length = 281
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 104/268 (38%), Gaps = 48/268 (17%)
Query: 136 EEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIA 195
+E +SSL V + P + A+ + G Y R G+ +A+ ++KA ++
Sbjct: 48 DENISSLTA----VIERNPSDPEAYNVRGSAYGRGGKYQEALRDFDKALQL--------- 94
Query: 196 RPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLG 255
RP + Q + + L+ GD + L+ S+Q + + G
Sbjct: 95 RP---NFYQAYANRALIHRFLGDQA-----------SALADYNRSIQLNPSYDAAYIGRG 140
Query: 256 LILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNH 315
+ K+GR+Q + S + +D + N G+ Y G Q A +D
Sbjct: 141 NLYRKAGRVQEAFSDFQRAIQLDTTDPRAYHNRGLIYQSQG---QHAFAIEDFSTAISLA 197
Query: 316 PAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWA 375
P A Y G L+ N E A D N+A +K D K A WA
Sbjct: 198 PDAAEPYN-------GRGLSYIATNDEENAFAD----FNMA-------IKLDGKIAESWA 239
Query: 376 NLANAYYLTGDHRSSGKCLEKAAKLEPN 403
N A Y GD + + K +AA+L+PN
Sbjct: 240 NQALIYERRGDKQRAAKSYARAAQLDPN 267
>gi|425450472|ref|ZP_18830298.1| Similar to tr|Q96301|Q96301 [Microcystis aeruginosa PCC 7941]
gi|389768683|emb|CCI06276.1| Similar to tr|Q96301|Q96301 [Microcystis aeruginosa PCC 7941]
Length = 1254
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 80/213 (37%), Gaps = 23/213 (10%)
Query: 228 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 287
EE E+ ++ S+Q D+ V+ +L + + + L + P+N + N
Sbjct: 1063 EETEKAIACYSHSVQLDSTNMEVYKSLAQLYDRQENYAKAEKYYRCALLLQPDNLELRYN 1122
Query: 288 LGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL 347
LG+ ++ +++ CFQ +I Q P I Y L G
Sbjct: 1123 LGVVLYEQEKFDKAVSCFQKII---QAKPQDAIAYLHL------------------GISY 1161
Query: 348 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP--NCM 405
Q + AK C A++ DP A + NL Y D + + C + + +P
Sbjct: 1162 KQQKLLTKAKSCFEKAIELDPDYAMAYYNLGVVYSCQPDEKKAVDCFRQCLRCDPANKLA 1221
Query: 406 STRYAVAVSRIKDAERSQEPTEQLSWAGNEMAS 438
T A+S IK+ + W N++ +
Sbjct: 1222 HTALLFALSGIKEVSSEEIYDASSRWYRNKIQT 1254
Score = 43.5 bits (101), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 42/202 (20%), Positives = 80/202 (39%), Gaps = 21/202 (10%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
ELE + ++++ D A ++ LG + + G+L+ +IS + P+ NL
Sbjct: 996 ELESAKNFYLQAIKVDATYAKSYHNLGFLAAQQGQLEEAISYYQQAIESQPDYPTAFYNL 1055
Query: 289 GIAYFQSGDMEQSAKCFQ-----------------DLILKDQNHPAALINYAALLLCKYG 331
G+ Y Q + E++ C+ L + +N+ A Y LL +
Sbjct: 1056 GLVYEQLEETEKAIACYSHSVQLDSTNMEVYKSLAQLYDRQENYAKAEKYYRCALLLQPD 1115
Query: 332 SVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSG 391
++ G L + + A C ++A P+ A + +L +Y +
Sbjct: 1116 NL----ELRYNLGVVLYEQEKFDKAVSCFQKIIQAKPQDAIAYLHLGISYKQQKLLTKAK 1171
Query: 392 KCLEKAAKLEPNCMSTRYAVAV 413
C EKA +L+P+ Y + V
Sbjct: 1172 SCFEKAIELDPDYAMAYYNLGV 1193
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 61/288 (21%), Positives = 118/288 (40%), Gaps = 63/288 (21%)
Query: 98 NKLGKCRSRISSKMDSALEF-----GVDADGDQS-----GLGTSSSSREEKVSSLKTGLV 147
++LG+ ++ ++ +++SA F VDA +S L EE +S + +
Sbjct: 985 HQLGREKT-LTGELESAKNFYLQAIKVDATYAKSYHNLGFLAAQQGQLEEAISYYQQAI- 1042
Query: 148 HVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELL-SLVQIH 206
P A + LGL+Y++L + KA++ Y + ++ D E+ SL Q++
Sbjct: 1043 ---ESQPDYPTAFYNLGLVYEQLEETEKAIACYSHSVQL------DSTNMEVYKSLAQLY 1093
Query: 207 HAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQS 266
Q ++ L+P+ LE + +N LG++L + +
Sbjct: 1094 DRQENYAKAEKYYRCALLLQPDNLE-----------------LRYN-LGVVLYEQEKFDK 1135
Query: 267 SISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL 326
++S ++ P + +LGI+Y Q + ++ CF+ I D ++ A N +
Sbjct: 1136 AVSCFQKIIQAKPQDAIAYLHLGISYKQQKLLTKAKSCFEKAIELDPDYAMAYYNLGVVY 1195
Query: 327 LCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADP--KAAH 372
C+ D+ AV+ ++C L+ DP K AH
Sbjct: 1196 SCQ-----------------PDEKKAVDCFRQC----LRCDPANKLAH 1222
>gi|118378373|ref|XP_001022362.1| TPR Domain containing protein [Tetrahymena thermophila]
gi|89304129|gb|EAS02117.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
Length = 390
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/255 (20%), Positives = 107/255 (41%), Gaps = 32/255 (12%)
Query: 159 AHFLLGLMYQRLGQPLKAVSSYEKA-------EEILLRCEADIARPELLSLVQIHHAQCL 211
++ LGL+YQ+ GQ +++ Y+K E L + A + + + +C+
Sbjct: 49 VYYNLGLVYQQKGQLDESIKWYKKCLNLNPNDESCLQKIGAVYFQKNMFDECIEKNLRCI 108
Query: 212 LPESSGDNSLDK----ELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSS 267
N + +E +E L+ K+S++ + Q + +G+I + G L+ +
Sbjct: 109 QINPKNINYYNNLGFIFIEKNMNDEALNYFKKSLEINPNQDQINYNIGVIYDRKGLLEEA 168
Query: 268 ISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLL 327
I + + ++P C NLG+ + +++ + +Q I+ + H + N LL
Sbjct: 169 IKHYQNCINLNPEYSKCYYNLGVCFRNKNMFDEAIQNYQKCIILNPQHESCYYNLGNALL 228
Query: 328 CKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDH 387
E LD+ A++ ++C L +PK + N+ NA+ +
Sbjct: 229 ---------------EKNMLDE--AISAFQKC----LNINPKKDSCYENMGNAFLRKEMY 267
Query: 388 RSSGKCLEKAAKLEP 402
+ K +K+ +L P
Sbjct: 268 NEAIKSYQKSIELNP 282
Score = 38.9 bits (89), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 38/75 (50%), Gaps = 6/75 (8%)
Query: 236 KLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQS 295
KL +++D V+ LGL+ + G+L SI L ++PN+ C+ +G YFQ
Sbjct: 37 KLYAQLEADDND--VYYNLGLVYQQKGQLDESIKWYKKCLNLNPNDESCLQKIGAVYFQK 94
Query: 296 GD----MEQSAKCFQ 306
+E++ +C Q
Sbjct: 95 NMFDECIEKNLRCIQ 109
>gi|340621977|ref|YP_004740429.1| hypothetical protein Ccan_12060 [Capnocytophaga canimorsus Cc5]
gi|339902243|gb|AEK23322.1| TPR repeat protein [Capnocytophaga canimorsus Cc5]
Length = 459
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 74/176 (42%), Gaps = 18/176 (10%)
Query: 265 QSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAA 324
Q I+ L+ L P LG Y +++++ +CF I+ D A A
Sbjct: 183 QECIAFLNQFLNQSPYCEIAWYYLGKQYIHQENLQEALRCFDFAIISDDTFTGAYFEKAK 242
Query: 325 LL---------LCKYGSVLAGAGAN----TGEGACLDQASAVNVAKECLLAALKADPKAA 371
+L + Y L A+ G C ++ + A++ A++ DP+ +
Sbjct: 243 VLEMFGEYQKAIENYKITLTLDDASPLVFLHIGKCYEKMNDDESAEKYYFKAVQEDPQLS 302
Query: 372 HIWANLANAYYLTGDHRSSGKCLEKAAKLEPN--CMSTRYA---VAVSRIKDAERS 422
W NL+ YYL G+ S K L K +LE RYA +AV+ +K AE++
Sbjct: 303 KSWMNLSEFYYLRGEFAKSLKYLYKVLQLEEENPFYWKRYAEINLAVNDLKKAEQA 358
>gi|394988448|ref|ZP_10381283.1| hypothetical protein SCD_00848 [Sulfuricella denitrificans skB26]
gi|393791827|dbj|GAB70922.1| hypothetical protein SCD_00848 [Sulfuricella denitrificans skB26]
Length = 735
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 73/168 (43%), Gaps = 17/168 (10%)
Query: 253 TLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKD 312
LG++L++ GRL + + L L + PN+ D NLGIA + + ++ CFQ +
Sbjct: 89 NLGVVLVEQGRLSEAEANLRRALEIKPNHADAHNNLGIALMKQERLSEAEPCFQQALKIK 148
Query: 313 QNHPAALINYAALLLCKYGSVLAGAGANTGE---------------GACLDQASAVNVAK 357
++ AL N +LL + +LA A + E G CL Q + ++
Sbjct: 149 PDYHEALNNLGSLLTEQ--GLLAEAEISCVEALKIKPDYVPALSNLGVCLQQQGRLAESE 206
Query: 358 ECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 405
C AL+ P +A L G + L +A +++P+ +
Sbjct: 207 ACFRRALEIKPDSAEALCGLGITLNDQGRFPEAEANLRRALEIKPDYV 254
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 37/70 (52%)
Query: 252 NTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILK 311
+ LG+IL K GR+ +I+ + L +DP+N D + N G+A G +E+S + +
Sbjct: 258 SNLGMILEKQGRIDEAIASYNRALELDPDNPDILNNFGLALQDQGRLEESIPLMRHALKS 317
Query: 312 DQNHPAALIN 321
H AA N
Sbjct: 318 KPGHLAAQNN 327
>gi|340505437|gb|EGR31764.1| hypothetical protein IMG5_102640 [Ichthyophthirius multifiliis]
Length = 1411
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 82/197 (41%), Gaps = 24/197 (12%)
Query: 225 LEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDC 284
+E +E ++ +LK++++ + R + + +GLI ++ Q + L DP + +C
Sbjct: 1139 IEKKEYKKASEELKQTLKINPRFSGAFKAMGLIFYRNANEQIACKYYQKALECDPTDMEC 1198
Query: 285 IGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKY--GSVLAGAG---- 338
L Y+ + + + + ++++ DQN I Y L C Y G +
Sbjct: 1199 KVGLANCYYLLENFDLAIQYYEEISNIDQNEE---IEY-NLGNCYYMKGEIDEAISHYKN 1254
Query: 339 ------------ANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGD 386
N G C+ Q A EC + +P + NLAN YY+ G+
Sbjct: 1255 SIDIKPDKTDCLYNLGNAFCIVQ--NFEKALECFQKTVDIEPHNSSAIYNLANTYYILGE 1312
Query: 387 HRSSGKCLEKAAKLEPN 403
H + EKA LEPN
Sbjct: 1313 HELAFIQFEKALDLEPN 1329
Score = 39.7 bits (91), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 80/392 (20%), Positives = 145/392 (36%), Gaps = 98/392 (25%)
Query: 239 ESMQSDTRQAVVWNTLG---LILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQS 295
+S+Q D + V LG L+L + +I L+ L++D N+ DC+ LG AY +
Sbjct: 945 QSLQPDNFEITV--KLGKAYLLLNNEDGIDDAIFHLTKALSIDENDYDCLIGLGKAYEKK 1002
Query: 296 GDMEQSAKCFQD-------------------LILKDQNHPAALINYAALL---------L 327
GD+++S + Q L LK ++ A + +L L
Sbjct: 1003 GDIDKSIQFTQVAISLPNSLPNINSILFLGMLYLKKKDIYNASEQFKKILQIDPKNVNAL 1062
Query: 328 CKYGSVLAGAG------ANTGEGACLDQASAV----------------NVAKECLLAALK 365
+Y + L+ G E LDQ + V + A EC ++
Sbjct: 1063 IEYATSLSLQGQYDKAVQYFKEAVSLDQENIVGNLRLGKIFQNKLNDLDGAIECYKKIIQ 1122
Query: 366 ADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQEP 425
P+ + L AY +++ + + L++ K+ P A+ + ++A
Sbjct: 1123 VQPEFSKAHYQLGLAYIEKKEYKKASEELKQTLKINPRFSGAFKAMGLIFYRNA------ 1176
Query: 426 TEQLSWAGNEMASILREGDPVQIEPPIAWA-------GFAAVQKTHHEVAAAFETEENEL 478
EQ++ + A E DP +E + A F + + E++ + EE E
Sbjct: 1177 NEQIACKYYQKA---LECDPTDMECKVGLANCYYLLENFDLAIQYYEEISNIDQNEEIEY 1233
Query: 479 SKMEEC---AGAGESAFLDQASAVNV-----------------------AKECLLAALKA 512
+ + C G + A +++++ A EC +
Sbjct: 1234 N-LGNCYYMKGEIDEAISHYKNSIDIKPDKTDCLYNLGNAFCIVQNFEKALECFQKTVDI 1292
Query: 513 DPKAAHIWANLANAYYLTGDHRSSGKCLEKVL 544
+P + NLAN YY+ G+H + EK L
Sbjct: 1293 EPHNSSAIYNLANTYYILGEHELAFIQFEKAL 1324
>gi|409196336|ref|ZP_11224999.1| tetratricopeptide repeat protein [Marinilabilia salmonicolor JCM
21150]
Length = 713
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 66/152 (43%), Gaps = 21/152 (13%)
Query: 251 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 310
+N G++ K ++SI L VDP N + + NLGIAY Q+ D E++ + + +++
Sbjct: 96 YNLRGIVHQKLENPKASIDDYKQGLDVDPLNMNLMINLGIAYIQTKDFEKATQVYSEILD 155
Query: 311 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 370
+ N A +N LA AN GA D + AV + +P
Sbjct: 156 ESPNMVTAYLNRG----------LARFSANDTVGALQDFSQAV-----------ERNPYI 194
Query: 371 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 402
+ N + YY G+ + K ++ A L P
Sbjct: 195 PDGFVNRSMVYYHQGEFEKALKDVDAAVLLRP 226
>gi|409992949|ref|ZP_11276112.1| hypothetical protein APPUASWS_17665 [Arthrospira platensis str.
Paraca]
gi|291567436|dbj|BAI89708.1| TPR domain protein [Arthrospira platensis NIES-39]
gi|409936195|gb|EKN77696.1| hypothetical protein APPUASWS_17665 [Arthrospira platensis str.
Paraca]
Length = 883
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 50/102 (49%)
Query: 225 LEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDC 284
LE + +E ++K ++ +Q + + TLGL L KS RL+++ + + +DPN
Sbjct: 22 LEEGKFDEAIAKCQQVIQQQPEWVMAYKTLGLALQKSNRLEAAENAYKKAINLDPNLVAA 81
Query: 285 IGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL 326
GNLG Y Q G E++ + I D N N A +L
Sbjct: 82 YGNLGSLYAQQGRWEEAETTLKQAINIDPNFRGVYRNLARVL 123
>gi|451980918|ref|ZP_21929300.1| hypothetical protein NITGR_310031 [Nitrospina gracilis 3/211]
gi|451761840|emb|CCQ90543.1| hypothetical protein NITGR_310031 [Nitrospina gracilis 3/211]
Length = 268
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 83/203 (40%), Gaps = 26/203 (12%)
Query: 123 GDQSGLGTSSSSREEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEK 182
GD+S + S +KTG R + + +F + + R A+ YEK
Sbjct: 47 GDESISVVPNESDRATTEKMKTGFD--PRSLDDKSR-YFNIATFHHRNKDYFAALKYYEK 103
Query: 183 AEEILLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQ 242
A+ R + AR IH+ + L+ + G + +E + +L ++++
Sbjct: 104 AK----RLDPTNAR--------IHNNRALIYKEMG-----------KPQEAIGELLQAVR 140
Query: 243 SDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSA 302
D+ +N LGLI K G +++ +DP N + I NL I Y Q ++
Sbjct: 141 LDSNYGKAYNNLGLIYYKMGDGINAVRYFEKATELDPANVESINNLAILYKQQRHYRRAE 200
Query: 303 KCFQDLILKDQNHPAALINYAAL 325
++ +I + HP N A L
Sbjct: 201 LLYRKVINLEPRHPEGYYNLALL 223
>gi|302039657|ref|YP_003799979.1| hypothetical protein NIDE4395 [Candidatus Nitrospira defluvii]
gi|300607721|emb|CBK44054.1| protein of unknown function, TPR-like [Candidatus Nitrospira
defluvii]
Length = 345
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 108/263 (41%), Gaps = 40/263 (15%)
Query: 156 NAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPES 215
NA H + GL + GQ ++++SY++A ++ + A P L QIH
Sbjct: 89 NAQTHLVQGLFLAQSGQSEQSMASYKEAAKLAPQS----AYPHYF-LAQIHE-------- 135
Query: 216 SGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLL 275
+ LE + + +E+++ A LG+ + GRL+ +I ++
Sbjct: 136 ----------RADHLEMAIKEYREAVKLAPAFAPARTNLGVAYQEQGRLEMAIPQYREVI 185
Query: 276 AVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAA----------- 324
++PN+ NLG A + G E + + +++ + N + I++A
Sbjct: 186 KLNPNDALAHANLGCALAEQGKFEPALQAYKEAL--RLNPSDSEIHFALGGVYETKGRMD 243
Query: 325 LLLCKYGSVLA----GAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANA 380
L L +Y A A+T G L + S + A E A+KA+P+ A +
Sbjct: 244 LALREYREATQLNPEFASAHTALGWLLMEQSRASEAMESFSKAVKANPEEAQALYGIGRI 303
Query: 381 YYLTGDHRSSGKCLEKAAKLEPN 403
Y G S+ + KA + E +
Sbjct: 304 YAAKGKRESAAENFSKAIRFEKD 326
>gi|13472041|ref|NP_103608.1| hypothetical protein mll2208 [Mesorhizobium loti MAFF303099]
gi|14022786|dbj|BAB49394.1| mll2208 [Mesorhizobium loti MAFF303099]
Length = 551
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 104/265 (39%), Gaps = 40/265 (15%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 213
P +A A+ GL + R G +A++ Y +A L P
Sbjct: 160 PGDARAYHNRGLNWARKGDKERAIADYSQA-------------------------ISLDP 194
Query: 214 E--SSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVL 271
+ SS +N D + + ++ + + DT+ A + GLI + G +I+
Sbjct: 195 KNASSYNNRGDAWDSKGDDDRAMADYNQVIILDTKNAHAYYRRGLIWSRKGDDSRAIADY 254
Query: 272 SSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCK-- 329
S ++++DP + N G+A+ + GD +++ F + I D AA + L K
Sbjct: 255 SQVISLDPTDPSIRYNKGLAWLRKGDGDRAIADFDEAIRLDPKMAAAYYDRGTEWLRKGD 314
Query: 330 -------YGSVL----AGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLA 378
Y V+ A A G L++ A L A+ DPK A I++N A
Sbjct: 315 RDRAITDYSEVITLEPTNAMALNDRGFVLNELGEYERALADLNRAIGLDPKQAKIYSNRA 374
Query: 379 NAYYLTGDHRSSGKCLEKAAKLEPN 403
A GD + +A L+PN
Sbjct: 375 IARAAKGDFAPALADYNQAIALDPN 399
Score = 46.2 bits (108), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 81/213 (38%), Gaps = 24/213 (11%)
Query: 155 KNAHAHFLLGLMYQRLGQPLKAVSSY---------------EKAEEILLRCEADIARPEL 199
KNAHA++ GL++ R G +A++ Y K L + + D A +
Sbjct: 229 KNAHAYYRRGLIWSRKGDDSRAIADYSQVISLDPTDPSIRYNKGLAWLRKGDGDRAIADF 288
Query: 200 LSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILL 259
+++ G L K + + ++ E + + A+ N G +L
Sbjct: 289 DEAIRLDPKMAAAYYDRGTEWLRKG----DRDRAITDYSEVITLEPTNAMALNDRGFVLN 344
Query: 260 KSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAA- 318
+ G + +++ L+ + +DP N IA GD + + I D N P A
Sbjct: 345 ELGEYERALADLNRAIGLDPKQAKIYSNRAIARAAKGDFAPALADYNQAIALDPNFPNAY 404
Query: 319 ----LINYAALLLCKYGSVLAGAGANTGEGACL 347
+N+ + +L K A A A + A L
Sbjct: 405 AGRGFVNFYSGMLAKAEPDFAKAAALAPDNAYL 437
>gi|406983319|gb|EKE04534.1| TPR Domain containing protein [uncultured bacterium]
Length = 257
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 81/186 (43%), Gaps = 37/186 (19%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEI-------------LLRCEADIARPELL 200
P N + + LG +Y +LG+P +A+ SY+KA EI + DIA+
Sbjct: 32 PDNPYLYNNLGTIYYKLGKPDEAIESYKKALEIDPNVQGIYQNLADIYLANEDIAQ---- 87
Query: 201 SLVQIHHAQCLLPESSG-----------DNSLDKELEPEELEEILSKLKESMQSDTRQAV 249
+L+++ HA + P++ G D D + +ELE+++ K + + A
Sbjct: 88 ALIELQHAIIINPDNPGPRYHYARVLMRDFRFDAAI--DELEKVIEKAPNNTDAHYDLAT 145
Query: 250 VWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLI 309
+ + G +IS + + P+N D +L + Y + ++++ K F I
Sbjct: 146 AY-------FQMGNYDGAISEYEKVQEMVPDNADIYYHLAVTYEANDQIDEAIKGFSKAI 198
Query: 310 LKDQNH 315
+Q H
Sbjct: 199 ELNQAH 204
>gi|255571800|ref|XP_002526843.1| tetratricopeptide repeat protein, tpr, putative [Ricinus communis]
gi|223533847|gb|EEF35578.1| tetratricopeptide repeat protein, tpr, putative [Ricinus communis]
Length = 258
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 67/143 (46%)
Query: 176 AVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILS 235
V ++ ++L+R E D++ EL V+ A G L ++ P + +L
Sbjct: 91 GVGTFFVIRQVLVRRELDLSAKELQEQVRSGDASATELFELGAVMLRRKFYPAANKFLLQ 150
Query: 236 KLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQS 295
+++ D A V+N LG+ ++ G+L I+ + + + P NLG AY +
Sbjct: 151 AIEKWDGDDQDLAQVYNALGVSYVRDGKLDKGITQFETAVKLQPGYVTAWNNLGDAYEKK 210
Query: 296 GDMEQSAKCFQDLILKDQNHPAA 318
+ + + K F++++L D N+ A
Sbjct: 211 KEYKSALKAFEEVLLFDPNNKVA 233
>gi|413936918|gb|AFW71469.1| hypothetical protein ZEAMMB73_864118 [Zea mays]
Length = 706
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 79/195 (40%), Gaps = 14/195 (7%)
Query: 238 KESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGD 297
+ ++Q+ A+ + L I + G+L +I + + DP + N+G A +G
Sbjct: 10 QRALQARPDYAMAYGNLATIYYEQGQLDMAIRCYNQAIVYDPQFIEAYNNMGNALKDAGR 69
Query: 298 MEQSAKCFQDLILKDQNHPAALINYAALLL------CKYGSVLAGAGANTGEGACLDQAS 351
+E++ C++ + NHP AL N + + A +G + L+ +
Sbjct: 70 VEEAINCYRSCLALQANHPQALTNLGNIYMEWNMISAATSFYKAAISVTSGLSSPLNNLA 129
Query: 352 AV-----NVAK--ECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNC 404
+ N A C L+ DP AA N N + G + + +AA + PN
Sbjct: 130 VIYKQQGNYADAITCYTEVLRIDPTAADALVNRGNTFKEIGRVNEAIQDYVQAATIRPN- 188
Query: 405 MSTRYAVAVSRIKDA 419
M +A S KD+
Sbjct: 189 MPEAHANLASAYKDS 203
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 82/192 (42%), Gaps = 15/192 (7%)
Query: 226 EPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCI 285
E +L+ + +++ D + +N +G L +GR++ +I+ S LA+ N+ +
Sbjct: 32 EQGQLDMAIRCYNQAIVYDPQFIEAYNNMGNALKDAGRVEEAINCYRSCLALQANHPQAL 91
Query: 286 GNLGIAYFQSGDMEQSAKCFQDLI-----LKDQNHPAALI-----NYAALLLCKYGSVL- 334
NLG Y + + + ++ I L + A+I NYA + C Y VL
Sbjct: 92 TNLGNIYMEWNMISAATSFYKAAISVTSGLSSPLNNLAVIYKQQGNYADAITC-YTEVLR 150
Query: 335 ---AGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSG 391
A A G + VN A + + A P ANLA+AY +G ++
Sbjct: 151 IDPTAADALVNRGNTFKEIGRVNEAIQDYVQAATIRPNMPEAHANLASAYKDSGHVETAI 210
Query: 392 KCLEKAAKLEPN 403
++A +L P+
Sbjct: 211 ISYKQALRLRPD 222
>gi|229577037|ref|NP_001153421.1| tetratricopeptide repeat domain 37 [Nasonia vitripennis]
Length = 1302
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 101/238 (42%), Gaps = 37/238 (15%)
Query: 191 EADIARPELLSLVQIHHAQCLLPESSGDNS------------LDKELEPEELEEILSKLK 238
++ I R L L++ A+ L+ D + L +E EE ++L +
Sbjct: 381 KSSILRAHLYVLLRDKRAKVLINNLKNDQNTKIEGTVLHAMDLLQERHLEEAADVLGSIL 440
Query: 239 ESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQ--SG 296
E+ ++ W TLG I + S+ + DPNN +C+ LG Y Q S
Sbjct: 441 ETSEA-------WLTLGKIHWEMADYGHSLMAFLKGIRADPNNWECLVYLG-RYHQEHSK 492
Query: 297 DMEQSAKCFQDLILKDQNHPAALINYAAL-LLCKYGS---VLAGAGANTGEG-------- 344
D ++S KC+Q + + N A I + + L K L N G G
Sbjct: 493 DYDRSKKCYQKALQINPNSEQAGIGLSLVHRLLKNNEENLKLLTQLTNQGRGPKWALLQL 552
Query: 345 --ACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKL 400
LDQ ++ + A L A+KADP ++ W LA+AY G H S+ K E+A KL
Sbjct: 553 GLQYLDQGNS-SEAVAILRNAVKADPIDSNCWECLADAYLARGAHLSAIKSYERALKL 609
>gi|386001044|ref|YP_005919343.1| Tetratricopeptide TPR_2 [Methanosaeta harundinacea 6Ac]
gi|357209100|gb|AET63720.1| Tetratricopeptide TPR_2 [Methanosaeta harundinacea 6Ac]
Length = 351
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 56/146 (38%), Gaps = 21/146 (14%)
Query: 231 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 290
EE L + + D++ WN G +L + GRL+ +++ + LA+DP + D + G
Sbjct: 125 EEALESYNRAAEFDSKDPDAWNGRGTVLARLGRLEEALASTDTALAMDPEDADAWNSKGA 184
Query: 291 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQA 350
Q G E++ C+ I D P N G+ L Q
Sbjct: 185 ILLQLGRPEEALACYDRAIEIDPEDPDLWNN---------------------RGSALHQL 223
Query: 351 SAVNVAKECLLAALKADPKAAHIWAN 376
A++ A+ DP + W N
Sbjct: 224 GRYQEAQDSYSWAIALDPLHEYAWYN 249
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 45/97 (46%)
Query: 230 LEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLG 289
LEE L+ ++ D A WN+ G ILL+ GR + +++ + +DP + D N G
Sbjct: 158 LEEALASTDTALAMDPEDADAWNSKGAILLQLGRPEEALACYDRAIEIDPEDPDLWNNRG 217
Query: 290 IAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL 326
A Q G +++ + I D H A N L+
Sbjct: 218 SALHQLGRYQEAQDSYSWAIALDPLHEYAWYNRGLLV 254
>gi|186682271|ref|YP_001865467.1| hypothetical protein Npun_R1867 [Nostoc punctiforme PCC 73102]
gi|186464723|gb|ACC80524.1| Tetratricopeptide TPR_2 repeat protein [Nostoc punctiforme PCC
73102]
Length = 409
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 111/277 (40%), Gaps = 42/277 (15%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 213
P ++ A+F LGL RL Q A++ Y+KA L E + A +L + Q L
Sbjct: 114 PHDSGAYFNLGLTLARLNQLEPAIAQYKKA----LSLEPNYADAHY-NLGNALYTQGKLT 168
Query: 214 ESSGDNSLDKELEPE----------------ELEEILSKLKESMQSDTRQAVVWNTLGLI 257
E+ + + L+P EL E +++ K+S+ D + A LG
Sbjct: 169 EAVTEYTAAIRLKPSYAPTYTRLGNALYDRGELAEAVTQYKKSISFDPKYADAHYYLGNA 228
Query: 258 LLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPA 317
L G+ +I+ ++ + + P N LG + G +E++ ++ + + N+
Sbjct: 229 LYAQGKSAEAIAEYTAAIRLSPKNPAGYNALGNTLYAQGKLEEAIAQYKQALNLEPNYAD 288
Query: 318 ALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANL 377
A N A+ + G + A D A+ + DPK A + L
Sbjct: 289 AHYNLASAFYAQ-GKLTE---------AITDYTEAIRI-----------DPKHAQAYTGL 327
Query: 378 ANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVS 414
ANA G + + +KA L PN T Y + ++
Sbjct: 328 ANAMDDQGKPQEAIAHYKKAISLVPNDAFTYYNLGIT 364
Score = 42.0 bits (97), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 88/209 (42%), Gaps = 20/209 (9%)
Query: 219 NSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVD 278
N+LD + +P+E ++ K+++ D + + LGL L + +L+ +I+ L+++
Sbjct: 91 NTLDDQGKPQE---AIAHYKKAISLDPHDSGAYFNLGLTLARLNQLEPAIAQYKKALSLE 147
Query: 279 PNNCDCIGNLGIAYFQSGDMEQSAKCFQDLI-LKDQNHPA------ALINYAAL--LLCK 329
PN D NLG A + G + ++ + I LK P AL + L + +
Sbjct: 148 PNYADAHYNLGNALYTQGKLTEAVTEYTAAIRLKPSYAPTYTRLGNALYDRGELAEAVTQ 207
Query: 330 YGSVL------AGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYL 383
Y + A A G SA +A+ AA++ PK + L N Y
Sbjct: 208 YKKSISFDPKYADAHYYLGNALYAQGKSAEAIAEYT--AAIRLSPKNPAGYNALGNTLYA 265
Query: 384 TGDHRSSGKCLEKAAKLEPNCMSTRYAVA 412
G + ++A LEPN Y +A
Sbjct: 266 QGKLEEAIAQYKQALNLEPNYADAHYNLA 294
>gi|380018362|ref|XP_003693099.1| PREDICTED: LOW QUALITY PROTEIN: tetratricopeptide repeat protein
37-like [Apis florea]
Length = 1298
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 73/172 (42%), Gaps = 26/172 (15%)
Query: 251 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSG-DMEQSAKCFQD-- 307
W LG+I + S+ + + D N C+ LG Y + G DME+S +C+Q
Sbjct: 444 WLLLGIIYWEMAEYNYSLMAFLNGIKADRYNWKCLVYLGHYYREYGNDMERSRRCYQSAL 503
Query: 308 -----------------LILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQA 350
+LK+Q+ L+ +L GS A G LDQ
Sbjct: 504 QINPNSEEAGIGLSTAYRLLKNQDANIKLLQ----VLTVQGSGPRWAWLQLGLQY-LDQG 558
Query: 351 SAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 402
+A K ++ DP +H W +LA+AY++ G + S+ K ++ +L P
Sbjct: 559 NAEQAIK-AFQHVIRVDPNDSHCWESLADAYFIRGAYTSALKSYQRVLELCP 609
>gi|343509819|ref|ZP_08747081.1| hypothetical protein VIS19158_05338 [Vibrio scophthalmi LMG 19158]
gi|342803616|gb|EGU38966.1| hypothetical protein VIS19158_05338 [Vibrio scophthalmi LMG 19158]
Length = 337
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 77/177 (43%), Gaps = 32/177 (18%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEI-LLRCEADIARPELLSLVQIHHAQCLL 212
P N A LG +Y R G+ + +S Y KA LLR D
Sbjct: 116 PNNVGALEELGSLYSRNGRTDEGMSYYIKAVNADLLRLGED------------------- 156
Query: 213 PESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLS 272
P + +N L E + E LK QS +N LG++L G + S+
Sbjct: 157 PTITANN-----LSVESVAE----LKHDAQSPDG---AYNGLGVLLDVKGEHDLAQSLFV 204
Query: 273 SLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCK 329
S + +D N D I NLG +Y+ SGD ++A + +++D+N+ AL N A + L +
Sbjct: 205 SAIEIDDKNLDAIINLGYSYYMSGDYPKAAVYTKAAVMRDENNEKALNNLALVYLAQ 261
>gi|118369961|ref|XP_001018183.1| TPR Domain containing protein [Tetrahymena thermophila]
gi|89299950|gb|EAR97938.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
Length = 3418
Score = 49.7 bits (117), Expect = 0.004, Method: Composition-based stats.
Identities = 73/296 (24%), Positives = 120/296 (40%), Gaps = 59/296 (19%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELL---SLVQIHHAQC 210
PK + + +LG Y++ Q L+A+ Y+K +I + E+L +L+QI +
Sbjct: 2888 PKFPNINGILGEAYEQDQQYLEALIHYQKQTQI------NPENTEILFKMALIQISYDNF 2941
Query: 211 LLPESSGDNSLDK--ELEPEE----------------LEEILSKLKESMQSDTRQAVVWN 252
+ +DK EL+P++ L+E + +S+
Sbjct: 2942 ----NQAKQLIDKLIELKPQDYLVYSAQAYLYKRQGNLQEAIKSFDQSLSIQPTNTFTLF 2997
Query: 253 TLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKD 312
L L + G ++ + + + PN+ + NLGI Y Q G E++ + F I D
Sbjct: 2998 NLALCHGELGNIKQEKKMYKEIQKISPNDRKMLNNLGIIYRQKGKYEKAIQLFSQCIKLD 3057
Query: 313 QNHPAALINYAALLLCKYGSV-LAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAA 371
Q N L LC Y GA +G LD+ +NV ECLL
Sbjct: 3058 QYFCDYFTN---LGLCYYAKGDYDGAINYFQKGYTLDR---INV--ECLL---------- 3099
Query: 372 HIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAV-----SRIKDAERS 422
NLA+A G+ + + K L+K K+ PN + Y + + I DA+ S
Sbjct: 3100 ----NLASALKAKGEPQQAIKYLQKIIKINPNYTAAYYNLGIIQKQNGNISDAQTS 3151
Score = 48.1 bits (113), Expect = 0.011, Method: Composition-based stats.
Identities = 42/186 (22%), Positives = 80/186 (43%), Gaps = 13/186 (6%)
Query: 252 NTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILK 311
N LG+I + G+ + +I + S + +D CD NLG+ Y+ GD + + FQ
Sbjct: 3031 NNLGIIYRQKGKYEKAIQLFSQCIKLDQYFCDYFTNLGLCYYAKGDYDGAINYFQKGYTL 3090
Query: 312 DQNHPAALINYAALL--------LCKYGSVLAGAGANTGE-----GACLDQASAVNVAKE 358
D+ + L+N A+ L KY + N G Q ++ A+
Sbjct: 3091 DRINVECLLNLASALKAKGEPQQAIKYLQKIIKINPNYTAAYYNLGIIQKQNGNISDAQT 3150
Query: 359 CLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKD 418
+++ DP + LA Y D+ +S K L++A +++ N + +A+ +
Sbjct: 3151 SFKLSIEKDPYHINSVIQLAIIYREQNDYDNSKKLLKQALEIDSNNELANFNIALLYRQK 3210
Query: 419 AERSQE 424
+ ++E
Sbjct: 3211 CKHAKE 3216
>gi|413936917|gb|AFW71468.1| hypothetical protein ZEAMMB73_864118 [Zea mays]
Length = 517
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 79/195 (40%), Gaps = 14/195 (7%)
Query: 238 KESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGD 297
+ ++Q+ A+ + L I + G+L +I + + DP + N+G A +G
Sbjct: 10 QRALQARPDYAMAYGNLATIYYEQGQLDMAIRCYNQAIVYDPQFIEAYNNMGNALKDAGR 69
Query: 298 MEQSAKCFQDLILKDQNHPAALINYAALLL------CKYGSVLAGAGANTGEGACLDQAS 351
+E++ C++ + NHP AL N + + A +G + L+ +
Sbjct: 70 VEEAINCYRSCLALQANHPQALTNLGNIYMEWNMISAATSFYKAAISVTSGLSSPLNNLA 129
Query: 352 AV-----NVAK--ECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNC 404
+ N A C L+ DP AA N N + G + + +AA + PN
Sbjct: 130 VIYKQQGNYADAITCYTEVLRIDPTAADALVNRGNTFKEIGRVNEAIQDYVQAATIRPN- 188
Query: 405 MSTRYAVAVSRIKDA 419
M +A S KD+
Sbjct: 189 MPEAHANLASAYKDS 203
Score = 40.0 bits (92), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 82/192 (42%), Gaps = 15/192 (7%)
Query: 226 EPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCI 285
E +L+ + +++ D + +N +G L +GR++ +I+ S LA+ N+ +
Sbjct: 32 EQGQLDMAIRCYNQAIVYDPQFIEAYNNMGNALKDAGRVEEAINCYRSCLALQANHPQAL 91
Query: 286 GNLGIAYFQSGDMEQSAKCFQDLI-----LKDQNHPAALI-----NYAALLLCKYGSVL- 334
NLG Y + + + ++ I L + A+I NYA + C Y VL
Sbjct: 92 TNLGNIYMEWNMISAATSFYKAAISVTSGLSSPLNNLAVIYKQQGNYADAITC-YTEVLR 150
Query: 335 ---AGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSG 391
A A G + VN A + + A P ANLA+AY +G ++
Sbjct: 151 IDPTAADALVNRGNTFKEIGRVNEAIQDYVQAATIRPNMPEAHANLASAYKDSGHVETAI 210
Query: 392 KCLEKAAKLEPN 403
++A +L P+
Sbjct: 211 ISYKQALRLRPD 222
>gi|430747186|ref|YP_007206315.1| O-linked N-acetylglucosamine transferase, SPINDLY family
[Singulisphaera acidiphila DSM 18658]
gi|430018906|gb|AGA30620.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Singulisphaera acidiphila DSM 18658]
Length = 827
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 55/263 (20%), Positives = 108/263 (41%), Gaps = 36/263 (13%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 213
P A AH LG++ ++ G+ +A+ + E+ I +PEL P
Sbjct: 137 PDLAEAHRHLGVLLRKQGKWGEAIVALEQVLRI---------KPEL-------------P 174
Query: 214 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 273
E+ D L E+ +LEE + + + +++ A ++ + ++L + GRL +I+
Sbjct: 175 ETLNDLGLLLEMT-GQLEEAVVRFQAAIRLRPEFAGAYSNMSVVLKQLGRLDEAITSGRE 233
Query: 274 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL------- 326
+ +DP NLG+ + G +++ CF + + D A N ++L
Sbjct: 234 AVRLDPGFAGAHNNLGVILEKEGGWDEATTCFHEALRLDPRFVEAYYNLGSVLSRLGRFE 293
Query: 327 ----LCKYGSVL--AGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANA 380
+C+ L A A+ L + + A+ A++ P+ + NL +
Sbjct: 294 DAESICRQAITLDPDSAEAHHNLAFALSERGQLTEAETNYRRAIQLKPEFVDPYVNLTSV 353
Query: 381 YYLTGDHRSSGKCLEKAAKLEPN 403
G + C +A +L+PN
Sbjct: 354 LGKFGKLDEAEACSREAVRLDPN 376
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 71/174 (40%), Gaps = 13/174 (7%)
Query: 254 LGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQ 313
LG++L K G+ +I L +L + P + + +LG+ +G +E++ FQ I
Sbjct: 146 LGVLLRKQGKWGEAIVALEQVLRIKPELPETLNDLGLLLEMTGQLEEAVVRFQAAIRLRP 205
Query: 314 NHPAALINYAALL--LCKYGSVLAG-----------AGANTGEGACLDQASAVNVAKECL 360
A N + +L L + + AGA+ G L++ + A C
Sbjct: 206 EFAGAYSNMSVVLKQLGRLDEAITSGREAVRLDPGFAGAHNNLGVILEKEGGWDEATTCF 265
Query: 361 LAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVS 414
AL+ DP+ + NL + G + +A L+P+ + +A +
Sbjct: 266 HEALRLDPRFVEAYYNLGSVLSRLGRFEDAESICRQAITLDPDSAEAHHNLAFA 319
Score = 41.6 bits (96), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 62/296 (20%), Positives = 110/296 (37%), Gaps = 45/296 (15%)
Query: 238 KESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGD 297
++ + +D W LG+ G L ++ L + P++ + +LGI + Q+G
Sbjct: 28 RQVLSADPSYIPAWYLLGVACHGLGNLTGALGAFQQTLRLQPDHAEAQNHLGIVWAQAGS 87
Query: 298 MEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAK 357
+E++ +CF +L Q P +L Y L AV +
Sbjct: 88 LEEAVRCF---LLTLQLQPNSLDAYKNL--------------------------AVTFER 118
Query: 358 ECLL-AALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRI 416
+ L A+ D K + +LA A HR G L K K ++ V RI
Sbjct: 119 QGRLDEAVACDRKVVELKPDLAEA------HRHLGVLLRKQGKWGEAIVALE---QVLRI 169
Query: 417 KD--AERSQEPTEQLSWAGNEMASILREGDPVQIEPPI--AWAGFAAVQKTHHEVAAAFE 472
K E + L G +++R +++ P A++ + V K + A
Sbjct: 170 KPELPETLNDLGLLLEMTGQLEEAVVRFQAAIRLRPEFAGAYSNMSVVLKQLGRLDEAIT 229
Query: 473 TEENELSKMEECAGAGES--AFLDQASAVNVAKECLLAALKADPKAAHIWANLANA 526
+ + AGA + L++ + A C AL+ DP+ + NL +
Sbjct: 230 SGREAVRLDPGFAGAHNNLGVILEKEGGWDEATTCFHEALRLDPRFVEAYYNLGSV 285
Score = 39.3 bits (90), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 106/256 (41%), Gaps = 40/256 (15%)
Query: 163 LGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPEL-LSLVQI----------HHAQCL 211
LGL+ + GQ +AV ++ A I LR E A + + L Q+ A L
Sbjct: 180 LGLLLEMTGQLEEAVVRFQAA--IRLRPEFAGAYSNMSVVLKQLGRLDEAITSGREAVRL 237
Query: 212 LPESSG-DNSLDKELEPEE-LEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSIS 269
P +G N+L LE E +E + E+++ D R + LG +L + GR + + S
Sbjct: 238 DPGFAGAHNNLGVILEKEGGWDEATTCFHEALRLDPRFVEAYYNLGSVLSRLGRFEDAES 297
Query: 270 VLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAAL--LL 327
+ + +DP++ + NL A + G + ++ ++ I Q P + Y L +L
Sbjct: 298 ICRQAITLDPDSAEAHHNLAFALSERGQLTEAETNYRRAI---QLKPEFVDPYVNLTSVL 354
Query: 328 CKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDH 387
K+G LD+A A C A++ DP + NL G
Sbjct: 355 GKFGK--------------LDEAEA------CSREAVRLDPNRSEALVNLGFVLIEKGHI 394
Query: 388 RSSGKCLEKAAKLEPN 403
+ +A +++PN
Sbjct: 395 AEALAAYREAERVDPN 410
>gi|434391113|ref|YP_007126060.1| Tetratricopeptide TPR_1 repeat-containing protein [Gloeocapsa sp.
PCC 7428]
gi|428262954|gb|AFZ28900.1| Tetratricopeptide TPR_1 repeat-containing protein [Gloeocapsa sp.
PCC 7428]
Length = 231
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 51/89 (57%), Gaps = 2/89 (2%)
Query: 228 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 287
E+ EE ++ +++++ ++R A+ +N +G++ + GR Q +I+ L ++P + + +
Sbjct: 119 EKAEEAIAAYQQAIEHNSRYALAYNAIGMVRARQGRWQEAITEYQKALEINPEYGEALTH 178
Query: 288 LGIAYFQSGDMEQSAKCFQDL--ILKDQN 314
LG A++Q G +++ + I + QN
Sbjct: 179 LGQAFWQQGRRDEALASLEKALSIFRSQN 207
>gi|220907898|ref|YP_002483209.1| hypothetical protein Cyan7425_2491 [Cyanothece sp. PCC 7425]
gi|219864509|gb|ACL44848.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 7425]
Length = 689
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 106/267 (39%), Gaps = 44/267 (16%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 213
P + AH+ LG Q+ G P AVS Y +A ++ +P+L+ A C L
Sbjct: 137 PDLSLAHYKLGTALQQQGDPKAAVSCYLQALQL---------QPDLVV------AHCNL- 180
Query: 214 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 273
G LD +LE ++ + ++Q LGL +++ +I+
Sbjct: 181 ---GSAYLDLG----QLEAAITAFQSALQLQPDHTGALFNLGLARQTQQQMREAIACYEK 233
Query: 274 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSV 333
++ ++P N + NLG AY G E++ F+ AL L G
Sbjct: 234 VIQLEPQNSEVYNNLGNAYLAVGQPERAIDVFR--------WATALKPDDLTLWYNLGKT 285
Query: 334 LAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKC 393
L TG AC A+N P+ ++I L +A GD ++
Sbjct: 286 LLEQADWTGAAACFRHVLALN-------------PQLSYIHVLLGSALVGQGDLPAASAA 332
Query: 394 LEKAAKLEPNCMSTRYAVAVSRIKDAE 420
++A KL+P ++ + +A + ++ E
Sbjct: 333 YQQALKLDPELVAAHHGIASALLESGE 359
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 78/200 (39%), Gaps = 13/200 (6%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
EL E + +Q Q LG+I + G ++++IS + V P D NL
Sbjct: 19 ELAEASQLYQRVLQQHPGQLDALQVLGMIAAQQGDVETAISYFRQAVQVAPAQADLHYNL 78
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALIN----------YAALLLCKYGSVLAGAG 338
G A GD + +Q + ++NH AA N YA + C ++
Sbjct: 79 GYALEAWGDGPAAIAAYQQALKLNRNHLAACYNLGELHLQRGEYAGAIPCFQWAIQLQPD 138
Query: 339 ---ANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLE 395
A+ G L Q A C L AL+ P NL +AY G ++ +
Sbjct: 139 LSLAHYKLGTALQQQGDPKAAVSCYLQALQLQPDLVVAHCNLGSAYLDLGQLEAAITAFQ 198
Query: 396 KAAKLEPNCMSTRYAVAVSR 415
A +L+P+ + + ++R
Sbjct: 199 SALQLQPDHTGALFNLGLAR 218
>gi|345302037|ref|YP_004823939.1| hypothetical protein Rhom172_0153 [Rhodothermus marinus
SG0.5JP17-172]
gi|345111270|gb|AEN72102.1| Tetratricopeptide TPR_2 repeat-containing protein [Rhodothermus
marinus SG0.5JP17-172]
Length = 465
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 71/185 (38%), Gaps = 21/185 (11%)
Query: 230 LEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLG 289
EE L + ++Q D ++ LG+ L + RL+ ++ L ++P++ + LG
Sbjct: 122 FEEALQTYERALQIDPLNDEIYYNLGITLERMDRLEEAVQALEEAARLNPDHPEVWYELG 181
Query: 290 IAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQ 349
Y + GD E+S C+ + D A N G L++
Sbjct: 182 FCYDRLGDDERSLACYDRHLELDPYSADAWYN---------------------RGIVLNR 220
Query: 350 ASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRY 409
A E AL W N NA GD R + + EK ++E +T Y
Sbjct: 221 MGRFREAVESYDYALAIQEDFGSAWYNRGNALTNLGDLRGAIESYEKVLEIEGGDPATYY 280
Query: 410 AVAVS 414
+A++
Sbjct: 281 NIALA 285
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 82/214 (38%), Gaps = 20/214 (9%)
Query: 228 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 287
+ LEE + L+E+ + + VW LG + G + S++ L +DP + D N
Sbjct: 154 DRLEEAVQALEEAARLNPDHPEVWYELGFCYDRLGDDERSLACYDRHLELDPYSADAWYN 213
Query: 288 LGIAYFQSGDMEQSAKCFQDLILKDQ--------NHPAALINYAALL--LCKYGSVLAGA 337
GI + G ++ + + D L Q N AL N L + Y VL
Sbjct: 214 RGIVLNRMGRFREAVESY-DYALAIQEDFGSAWYNRGNALTNLGDLRGAIESYEKVLEIE 272
Query: 338 GANTGE----GACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKC 393
G + ++ A + AL+ DP A W L Y + C
Sbjct: 273 GGDPATYYNIALAYEELQEYETAIQYFQLALEEDPAYAEAWYGLGCCYDALERFEEAIAC 332
Query: 394 LEKAAKLEPNCMSTRYAVA-----VSRIKDAERS 422
+E+A L+P YA A R++DA +S
Sbjct: 333 MERAVTLQPETSEFWYAKADCEYNARRLQDALQS 366
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 68/351 (19%), Positives = 125/351 (35%), Gaps = 39/351 (11%)
Query: 217 GDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLA 276
G + D L+P +E++++ + S + + + GR + ++ + LLA
Sbjct: 7 GFDDADDALDPSHIEQLVAAYEAQGSSAYFDSDTLEEIATYYYERGRFEDALGAIDRLLA 66
Query: 277 VDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL---------L 327
+ P D GI G E++ + ++ + + L+N L L
Sbjct: 67 LHPTASDAWMRRGILLSHLGRHEEALQAYERALSLNPTDTETLVNLGITLDNLGRFEEAL 126
Query: 328 CKYGSVLAGAGAN----TGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYL 383
Y L N G L++ + A + L A + +P +W L Y
Sbjct: 127 QTYERALQIDPLNDEIYYNLGITLERMDRLEEAVQALEEAARLNPDHPEVWYELGFCYDR 186
Query: 384 TGDHRSSGKCLEKAAKLEPNCMSTRY--AVAVSRIKDAERSQEPTEQLSWAGNEMASILR 441
GD S C ++ +L+P Y + ++R+ R +E E +A
Sbjct: 187 LGDDERSLACYDRHLELDPYSADAWYNRGIVLNRMG---RFREAVESYDYAL-------- 235
Query: 442 EGDPVQIEPPIAWAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNV 501
+Q + AW ++ A E+ E K+ E G + + + A A
Sbjct: 236 ---AIQEDFGSAWYNRGNALTNLGDLRGAIESYE----KVLEIEGGDPATYYNIALAYEE 288
Query: 502 AKECLLA------ALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKVLMV 546
+E A AL+ DP A W L Y + C+E+ + +
Sbjct: 289 LQEYETAIQYFQLALEEDPAYAEAWYGLGCCYDALERFEEAIACMERAVTL 339
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 53/263 (20%), Positives = 99/263 (37%), Gaps = 36/263 (13%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 213
P N ++ LG+ +R+ + +AV + E+A R D PE + +
Sbjct: 137 PLNDEIYYNLGITLERMDRLEEAVQALEEAA----RLNPD--HPE------VWYELGFCY 184
Query: 214 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 273
+ GD+ E L+ ++ D A W G++L + GR + ++
Sbjct: 185 DRLGDD-----------ERSLACYDRHLELDPYSADAWYNRGIVLNRMGRFREAVESYDY 233
Query: 274 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL--LCKYG 331
LA+ + N G A GD+ + + ++ ++ + PA N A L +Y
Sbjct: 234 ALAIQEDFGSAWYNRGNALTNLGDLRGAIESYEKVLEIEGGDPATYYNIALAYEELQEYE 293
Query: 332 SVL-----------AGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANA 380
+ + A A A G G C D A C+ A+ P+ + W A+
Sbjct: 294 TAIQYFQLALEEDPAYAEAWYGLGCCYDALERFEEAIACMERAVTLQPETSEFWYAKADC 353
Query: 381 YYLTGDHRSSGKCLEKAAKLEPN 403
Y + + + + +L+P
Sbjct: 354 EYNARRLQDALQSYRRVIELDPQ 376
>gi|118381790|ref|XP_001024055.1| TPR Domain containing protein [Tetrahymena thermophila]
gi|89305822|gb|EAS03810.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
Length = 376
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 65/317 (20%), Positives = 114/317 (35%), Gaps = 41/317 (12%)
Query: 252 NTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILK 311
N LG I ++ + L ++P C I NLG Y+ G +E + + ++ +
Sbjct: 58 NDLGKICQNKKNIEDAKLHYEKALKINPQYCMAIVNLGTVYYGQGMIEDAQQQYEKALQL 117
Query: 312 DQNHPAALINYAALLLCK---------YGSVLAGAG----ANTGEGACLDQASAVNVAKE 358
D A N A L K Y L A G A+
Sbjct: 118 DNKFYQAHFNLALLYDDKGMIEEAKQYYEQTLQANQEYYPALYNLGLIYQNEGHYQEARR 177
Query: 359 CLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAV----- 413
C L L +P+ + +L Y+ G + EKA ++ + +A
Sbjct: 178 CYLITLDINPQFYQAYISLGCIYFSLGMLEDAQNYCEKALQINNKSLDAHLNLAFIYDSK 237
Query: 414 SRIKDAERSQEPTEQ----LSWAGNEMASILREGDPVQIEPPIAWAGFAAVQKTHHEVAA 469
I++A +S E Q L A N + I R+ + ++ E + + + +++
Sbjct: 238 DMIEEARQSYEQVLQINPKLYQAQNNLGLIYRKKEMLE-EAKVCYEKSIQINDQYYQAYY 296
Query: 470 AFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYL 529
S + DQ + + AK+CL A+K +P NL YY
Sbjct: 297 NLS-----------------SIYYDQGN-IQEAKQCLEKAIKINPLYDQAHYNLGLIYYN 338
Query: 530 TGDHRSSGKCLEKVLMV 546
G+ + +C KV+++
Sbjct: 339 QGELEEAKRCFMKVVLI 355
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 78/187 (41%), Gaps = 15/187 (8%)
Query: 230 LEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLG 289
+EE ++++Q++ LGLI G Q + L ++P +LG
Sbjct: 138 IEEAKQYYEQTLQANQEYYPALYNLGLIYQNEGHYQEARRCYLITLDINPQFYQAYISLG 197
Query: 290 IAYFQSGDMEQSAK-CFQDLILKDQNHPAALINYAALLLCK---------YGSVLAG--- 336
YF G +E + C + L + +++ A L N A + K Y VL
Sbjct: 198 CIYFSLGMLEDAQNYCEKALQINNKSLDAHL-NLAFIYDSKDMIEEARQSYEQVLQINPK 256
Query: 337 -AGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLE 395
A G + + AK C +++ + + + NL++ YY G+ + + +CLE
Sbjct: 257 LYQAQNNLGLIYRKKEMLEEAKVCYEKSIQINDQYYQAYYNLSSIYYDQGNIQEAKQCLE 316
Query: 396 KAAKLEP 402
KA K+ P
Sbjct: 317 KAIKINP 323
Score = 40.0 bits (92), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 41/83 (49%)
Query: 228 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 287
E LEE ++S+Q + + + L I G +Q + L + ++P N
Sbjct: 272 EMLEEAKVCYEKSIQINDQYYQAYYNLSSIYYDQGNIQEAKQCLEKAIKINPLYDQAHYN 331
Query: 288 LGIAYFQSGDMEQSAKCFQDLIL 310
LG+ Y+ G++E++ +CF ++L
Sbjct: 332 LGLIYYNQGELEEAKRCFMKVVL 354
>gi|47848089|dbj|BAD21873.1| putative O-linked N-acetyl glucosamine transferase [Oryza sativa
Japonica Group]
gi|47848095|dbj|BAD21878.1| putative O-linked N-acetyl glucosamine transferase [Oryza sativa
Japonica Group]
Length = 953
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 86/203 (42%), Gaps = 16/203 (7%)
Query: 231 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 290
+E + + ++Q+ A+ + L I + G+L +I + + DP + N+G
Sbjct: 299 QEAIISYQRAVQARPDYAMAYGNLATIYYEQGQLDIAIRCYNQAIICDPQFVEAYNNMGN 358
Query: 291 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGA-------GANTGE 343
A +G +E++ C++ + NHP AL N + + ++ + A A +G
Sbjct: 359 ALKDAGRVEEAINCYRSCLALQANHPQALTNLGNIYM-EWNLISAAASFYKAAISVTSGL 417
Query: 344 GACLDQASAV-----NVAK--ECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEK 396
+ L+ + + N A C L+ DP AA N N + G + + +
Sbjct: 418 SSPLNNLAVIYKQQGNYADAITCYTEVLRVDPTAADALVNRGNTFKEIGRVNEAIQDYIQ 477
Query: 397 AAKLEPNCMSTRYAVAVSRIKDA 419
AA + P M+ +A S KD+
Sbjct: 478 AATIRPT-MAEAHANLASAYKDS 499
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 69/163 (42%), Gaps = 15/163 (9%)
Query: 254 LGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQ 313
LG I + I+ LA+DPN +C GN+ A+ + GD++ + + + I
Sbjct: 118 LGAIYYQIRNYDMCIAKNEEALAIDPNFAECYGNMANAWKEKGDVDLAIRYYLTAIQLRP 177
Query: 314 NHPAALINYAALLLCKYGSVLAGA--------------GANTGEGACLDQASAVNVAKEC 359
N A N A+ K G + A A++ G + + A C
Sbjct: 178 NFCDAWSNLASAYTWK-GRLNEAAQCCRQALAINPRLVDAHSNLGNLMKAQGFIQEAYNC 236
Query: 360 LLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 402
+ AL+ DP+ A W+NLA + GD + ++A KL+P
Sbjct: 237 YIEALRIDPQFAIAWSNLAGLFMEAGDLDKALLYYKEAVKLKP 279
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 112/268 (41%), Gaps = 46/268 (17%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELL----SLVQIHHAQ 209
P A A+ G +Y+ +G +A+ SY++A + ARP+ +L I++ Q
Sbjct: 279 PSFADAYLNQGNVYKTMGMSQEAIISYQRAVQ---------ARPDYAMAYGNLATIYYEQ 329
Query: 210 CLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSIS 269
+L+ + +++ D + +N +G L +GR++ +I+
Sbjct: 330 ------------------GQLDIAIRCYNQAIICDPQFVEAYNNMGNALKDAGRVEEAIN 371
Query: 270 VLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLI-----LKDQNHPAALI---- 320
S LA+ N+ + NLG Y + + +A ++ I L + A+I
Sbjct: 372 CYRSCLALQANHPQALTNLGNIYMEWNLISAAASFYKAAISVTSGLSSPLNNLAVIYKQQ 431
Query: 321 -NYAALLLCKYGSVL----AGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWA 375
NYA + C Y VL A A G + VN A + + A P A A
Sbjct: 432 GNYADAITC-YTEVLRVDPTAADALVNRGNTFKEIGRVNEAIQDYIQAATIRPTMAEAHA 490
Query: 376 NLANAYYLTGDHRSSGKCLEKAAKLEPN 403
NLA+AY +G ++ ++A +L P+
Sbjct: 491 NLASAYKDSGHVETAIVSYKQALRLRPD 518
Score = 42.4 bits (98), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 75/192 (39%), Gaps = 24/192 (12%)
Query: 251 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 310
W+ L GRL + LA++P D NLG G ++++ C+ + +
Sbjct: 183 WSNLASAYTWKGRLNEAAQCCRQALAINPRLVDAHSNLGNLMKAQGFIQEAYNCYIEALR 242
Query: 311 KDQNHPAALINYAALLL---------------CKYGSVLAGAGANTGEGACLDQASAVNV 355
D A N A L + K A A N G + + +
Sbjct: 243 IDPQFAIAWSNLAGLFMEAGDLDKALLYYKEAVKLKPSFADAYLNQG-----NVYKTMGM 297
Query: 356 AKECLLA---ALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVA 412
++E +++ A++A P A + NLA YY G + +C +A +P + Y
Sbjct: 298 SQEAIISYQRAVQARPDYAMAYGNLATIYYEQGQLDIAIRCYNQAIICDPQFVEA-YNNM 356
Query: 413 VSRIKDAERSQE 424
+ +KDA R +E
Sbjct: 357 GNALKDAGRVEE 368
>gi|383454518|ref|YP_005368507.1| hypothetical protein COCOR_02522 [Corallococcus coralloides DSM
2259]
gi|380728694|gb|AFE04696.1| hypothetical protein COCOR_02522 [Corallococcus coralloides DSM
2259]
Length = 271
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 75/165 (45%), Gaps = 14/165 (8%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 213
P +AHAH L +Y Q +A+ Y A + L E+ A L + H ++ +
Sbjct: 42 PTSAHAHDNLATVYAEKKQFREALGEYLTA--LKLEPESATAHYNLACFLSTHASEMAVE 99
Query: 214 ESSGDNSLDKELEPEEL------------EEILSKLKESMQSDTRQAVVWNTLGLILLKS 261
E LD E L EE + +L+ +++ D + A + L +++
Sbjct: 100 EYKEAIELDPEYPDAHLNLGLTYADQGRVEEAMRELQSAIELDPQDAFPRHELAALMMDE 159
Query: 262 GRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQ 306
G +SSI+ L ++ ++P+N + +LGI Y Q G ++ + ++
Sbjct: 160 GDYRSSITQLKEVVRLEPDNFEAQLDLGICYAQKGFYAEAERAYE 204
>gi|220922451|ref|YP_002497753.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium
nodulans ORS 2060]
gi|219947058|gb|ACL57450.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium
nodulans ORS 2060]
Length = 1022
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 54/279 (19%), Positives = 102/279 (36%), Gaps = 37/279 (13%)
Query: 164 GLMYQRLGQPLKAVSSYEKA-------------EEILLRCEADIARPELLSLVQIHHAQC 210
G +Q G+ +A++ Y +A R + + R ++ + A
Sbjct: 33 GYSFQNKGEYDRAIADYNQALRLDPKLTAAYVNRGFTFRSKGEYDR----AIADYNQALR 88
Query: 211 LLPES--SGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSI 268
L P S + +N D + E ++ ++Q D + +V+N G G +I
Sbjct: 89 LDPRSVIAYNNRGDAFYHKGDYERAIADYNRALQLDPKHPIVYNNRGFAFHGKGEYDRAI 148
Query: 269 SVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLC 328
+ + L +DPN N G A+ G+ +++ + + D + A N +
Sbjct: 149 ADYNQALQLDPNYTFAYNNRGFAFQGKGEYDRAIADYSQALRLDPKYAIAYTNRGDVFRS 208
Query: 329 K--YGSVLAGAG-----------ANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWA 375
K Y +A A G + A AL+ +PK
Sbjct: 209 KGEYNRAIADYNQALQFDPKPIIAYNNRGLAFQNMGEYDRAISDYTEALRLEPKYVIAVV 268
Query: 376 NLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVS 414
N A+A+ + G++ + ++A L PN YA+A +
Sbjct: 269 NRADAFRIKGEYDRAIVDYDQALHLNPN-----YAIAYN 302
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 38/195 (19%), Positives = 74/195 (37%), Gaps = 26/195 (13%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
E + ++ ++++ D + + G G +I+ + L +DP + N
Sbjct: 41 EYDRAIADYNQALRLDPKLTAAYVNRGFTFRSKGEYDRAIADYNQALRLDPRSVIAYNNR 100
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLD 348
G A++ GD E++ + + D HP ++ G G G A +
Sbjct: 101 GDAFYHKGDYERAIADYNRALQLDPKHP--------IVYNNRGFAFHGKGEYDRAIADYN 152
Query: 349 QASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTR 408
Q AL+ DP + N A+ G++ + +A +L+P +
Sbjct: 153 Q-------------ALQLDPNYTFAYNNRGFAFQGKGEYDRAIADYSQALRLDP-----K 194
Query: 409 YAVAVSRIKDAERSQ 423
YA+A + D RS+
Sbjct: 195 YAIAYTNRGDVFRSK 209
>gi|406955606|gb|EKD84014.1| hypothetical protein ACD_39C00303G0002, partial [uncultured
bacterium]
Length = 675
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 58/270 (21%), Positives = 105/270 (38%), Gaps = 40/270 (14%)
Query: 160 HFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPE------LLSLVQIHHAQCLLP 213
H LG+ Y +L + +A+ ++KA EI ++D +L + A
Sbjct: 316 HHKLGIAYSKLNKTQEAIFQWQKAIEI----DSDHFEAHHNLGIAYYNLQRFDEALNEWE 371
Query: 214 ESSGDNSLDKEL---------EPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRL 264
++ N D +L + +L+ +S K +++ D LG + G +
Sbjct: 372 KAKAQNPTDPDLYFKLGHAYRQKRKLDSAISSWKRTIELDPNNPNTHFVLGNAYDEKGLI 431
Query: 265 QSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAA 324
+I + + PN+ D NLGIAYFQ +Q+ ++D I
Sbjct: 432 DDAILAWRKVCELAPNDVDAHNNLGIAYFQKNMFDQAISEWEDAI--------------- 476
Query: 325 LLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLT 384
+ + G + G + D+A EC ALK P+ A I +NLA AY+
Sbjct: 477 RITPENGELYNKLGIAYIKLELFDKAV------ECWEKALKYKPEDADILSNLATAYHNR 530
Query: 385 GDHRSSGKCLEKAAKLEPNCMSTRYAVAVS 414
+ + + ++ K P R + ++
Sbjct: 531 EMYDKAIEIWKRVIKYNPQDSEARNKLGIA 560
Score = 46.2 bits (108), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 79/173 (45%), Gaps = 11/173 (6%)
Query: 160 HFLLGLMYQRLGQPLKAVSSYEKA-------EEILLRCEADIARPEL--LSLVQIHHAQC 210
HF LG+ Y LG+ +A+S +EKA +I R L S++ +
Sbjct: 78 HFKLGIAYYNLGKEDQAISLWEKAANLNPDDSDIFFRLGVAYYNKGLDDKSVIAFSKSIE 137
Query: 211 LLPESS-GDNSLDKELEPEEL-EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSI 268
L P++S N+L E+ ++ + + K+++ RQ ++N LG K + + +I
Sbjct: 138 LNPKNSEAHNNLAIVFYRLEMYQQAIDEWKKALALSPRQPEIFNNLGNAYSKLNQHREAI 197
Query: 269 SVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALIN 321
+L + P N + LG AY + D+E++ K ++ I + N A N
Sbjct: 198 ETWQKILDLTPENSEVYFKLGSAYGKLDDLEKAIKSWEKCISLNPNDIEAHFN 250
>gi|330508351|ref|YP_004384779.1| TPR-repeat-containing protein [Methanosaeta concilii GP6]
gi|328929159|gb|AEB68961.1| TPR-repeat protein [Methanosaeta concilii GP6]
Length = 440
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 72/188 (38%), Gaps = 13/188 (6%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
+ +E + E+++ D W G+ L G+ +I + +DP + GN
Sbjct: 175 KYDEAIEAYDEAIRLDPANVAAWGNKGVSLADQGKYDEAIEAYDEAIRLDPTDAAVWGNK 234
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLL--CKYGSVL-----------A 335
G++ G +++ + + + I D A N L+ KY + A
Sbjct: 235 GVSLADQGKHDEAIEAYDEAIRLDPTDAAVWGNKGVSLVDQGKYDEAIEAYDEAIRLDPA 294
Query: 336 GAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLE 395
A A +G L + A E A++ DP A W N N+ + S K +
Sbjct: 295 NAAAWGNKGVSLADQGKYDEAIEAYDEAIRLDPTDATAWFNKGNSLNKQKKYDESIKAYD 354
Query: 396 KAAKLEPN 403
+A +L P+
Sbjct: 355 EAIRLNPD 362
Score = 47.0 bits (110), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 34/183 (18%), Positives = 70/183 (38%), Gaps = 21/183 (11%)
Query: 231 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 290
+E + E+++ D A VW G+ L+ G+ +I + +DP N GN G+
Sbjct: 245 DEAIEAYDEAIRLDPTDAAVWGNKGVSLVDQGKYDEAIEAYDEAIRLDPANAAAWGNKGV 304
Query: 291 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQA 350
+ G +++ + + + I D A N +G L++
Sbjct: 305 SLADQGKYDEAIEAYDEAIRLDPTDATAWFN---------------------KGNSLNKQ 343
Query: 351 SAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYA 410
+ + + A++ +P A W N+ G H + + ++A +L+ + Y
Sbjct: 344 KKYDESIKAYDEAIRLNPDLAEPWIGKGNSLDDQGKHDEAIQAYDEAIRLDSTDANAWYN 403
Query: 411 VAV 413
V
Sbjct: 404 KGV 406
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 46/239 (19%), Positives = 88/239 (36%), Gaps = 25/239 (10%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
+ +E + E+++ D A W+ G+ G+ +I + +DP + GN
Sbjct: 39 KYDEAIKAYDEAIRLDPTIAAAWSNKGVAFADQGKHDEAIEAYDEAIRLDPTDAAAWGNK 98
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL--LCKYGSVLAGA----GAN-- 340
G + G +++ + + + I D A N L KY + G N
Sbjct: 99 GASLADQGKYDEAIEAYDEAIRLDPTDAIAWFNKGNSLNKQKKYDESIKAYDEAIGLNPV 158
Query: 341 -----TGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLE 395
G+G L + A E A++ DP W N + G + + + +
Sbjct: 159 LAEPWIGKGKSLADQGKYDEAIEAYDEAIRLDPANVAAWGNKGVSLADQGKYDEAIEAYD 218
Query: 396 KAAKLEPNCMSTRYAVAVSRIKDAERSQ-----------EPTEQLSWAGNEMASILREG 443
+A +L+P + VS + + +PT+ W GN+ S++ +G
Sbjct: 219 EAIRLDPTDAAVWGNKGVSLADQGKHDEAIEAYDEAIRLDPTDAAVW-GNKGVSLVDQG 276
>gi|406953657|gb|EKD82827.1| TPR Domain containing protein, partial [uncultured bacterium]
Length = 1487
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/251 (20%), Positives = 110/251 (43%), Gaps = 20/251 (7%)
Query: 228 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 287
E+ +++ L+E+ Q+ + + + ++G + +I L +L++ DP+N
Sbjct: 650 EDFAQVIEILQEARQTQPGNNEISSIISEAYARTGDHEMAILELKTLISNDPSNTQARIQ 709
Query: 288 LGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL 347
LG Y S ++Q++ F+D+I + ++P A + G + G + + + +
Sbjct: 710 LGRVYSISNMIDQASMTFKDIIADEPDNPVA--------RTELGCIYLSMGNSYSDSSMI 761
Query: 348 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP-NCMS 406
+ S VN K ALK DP++A+ L AY+ G + + +L+P +
Sbjct: 762 E--SGVNELK----TALKLDPQSANAHYELGKAYHDLGKVDEALSEFTRVLELDPLHIQG 815
Query: 407 TRYAVAVSRIKDAERSQEPTEQ---LSWAGNEMASILREGDPVQIEP--PIAWAGFAAVQ 461
Y ++ +K + ++ + +Q S G ++L ++I+P +AW +
Sbjct: 816 KEYYNSLVHVKVSSQANDGIKQARIFSERGMFKNAVLEYEKVIEIQPENQVAWYELGNLH 875
Query: 462 KTHHEVAAAFE 472
T A E
Sbjct: 876 FTMENYDKALE 886
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 69/161 (42%), Gaps = 21/161 (13%)
Query: 252 NTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILK 311
NTLG + L++G+ +I + +++ P+N D +LG Y Q +++ F I
Sbjct: 29 NTLGSLYLQTGQTDQAIEIYDRAISLAPDNKDLQFDLGQLYLQRNSFDKAEMHFNRAIDI 88
Query: 312 DQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAA 371
D+ A+I A L + + D SAV + ++ A++ D A
Sbjct: 89 DKKFTGAIIELARLKITQN-----------------DIDSAVTLYQQ----AIENDQDNA 127
Query: 372 HIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVA 412
+ A L AY +G + + KA L+PN + +A
Sbjct: 128 ILHAELGEAYEFSGLYNDAMMEYRKAEYLDPNNPDIHFKIA 168
>gi|340505436|gb|EGR31763.1| hypothetical protein IMG5_102630 [Ichthyophthirius multifiliis]
Length = 355
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 60/138 (43%), Gaps = 22/138 (15%)
Query: 267 SISVLSSLLAVDPNNCDCI-GNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAAL 325
+I ++A N D I NLG +++ GD++QS +++ + Q P L
Sbjct: 30 AIQYYKQIIASSSQNIDDIHYNLGNCFYKKGDVDQSIIHYKNALEIKQQKPDCL------ 83
Query: 326 LLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTG 385
N G C+ Q A++C A+K DP+ + NLAN YY+ G
Sbjct: 84 -------------YNLGNAYCIKQNYE--KAQKCFQKAIKFDPQNSSAIYNLANTYYVLG 128
Query: 386 DHRSSGKCLEKAAKLEPN 403
+ + K E A KLE N
Sbjct: 129 NSEQAAKQFEIALKLEQN 146
>gi|427731903|ref|YP_007078140.1| glycosyl transferase family protein [Nostoc sp. PCC 7524]
gi|427367822|gb|AFY50543.1| glycosyl transferase [Nostoc sp. PCC 7524]
Length = 395
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 69/158 (43%), Gaps = 21/158 (13%)
Query: 160 HFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESSGDN 219
H+ LG+ Y RL P +A+S Y+ A ++ + +L L ++ LL N
Sbjct: 242 HYHLGIAYNRLNNPQQAISHYQNAIKLPIY--------PMLKLGAYNNLGNLLKAVGDIN 293
Query: 220 SLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDP 279
K E +++ D A+ + LG+I G +I+ + + P
Sbjct: 294 GAKKAYE------------TALKIDPNFAIGYYNLGMIFKAVGMFTDAIACYQKAIRLQP 341
Query: 280 NNCDCIGNLGIAYFQSGDMEQSAKCFQD-LILKDQNHP 316
+ NLG+ + G+++ S F++ ++L +QN+P
Sbjct: 342 KYAEAYQNLGVVQLKVGNVQASVTAFKNAILLHEQNNP 379
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 71/172 (41%), Gaps = 22/172 (12%)
Query: 250 VWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIG----NLGIAYFQSGDMEQSAKCF 305
V + LG + ++ G+L I +L + N + + +LGIAY + + +Q+ +
Sbjct: 203 VCSKLGALYVEIGKLNQGIELLKRGITACQENYEVLYELHYHLGIAYNRLNNPQQAISHY 262
Query: 306 QDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALK 365
Q+ A+ L Y + GA N G L +N AK+ ALK
Sbjct: 263 QN----------------AIKLPIYPMLKLGAYNNLGN--LLKAVGDINGAKKAYETALK 304
Query: 366 ADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIK 417
DP A + NL + G + C +KA +L+P + V ++K
Sbjct: 305 IDPNFAIGYYNLGMIFKAVGMFTDAIACYQKAIRLQPKYAEAYQNLGVVQLK 356
>gi|354566048|ref|ZP_08985221.1| Tetratricopeptide TPR_1 repeat-containing protein [Fischerella sp.
JSC-11]
gi|353546556|gb|EHC16004.1| Tetratricopeptide TPR_1 repeat-containing protein [Fischerella sp.
JSC-11]
Length = 357
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/240 (21%), Positives = 102/240 (42%), Gaps = 42/240 (17%)
Query: 68 DSNHSSSHHDKGSILMSK-EMDVAEVEGKKINKLGKCRSRISSKMDSALEFGVDADGDQS 126
DSN +++H+ G+I++ + D A E + KL + AL AD
Sbjct: 76 DSNIAAAHNYLGNIMLQQSRFDAAVQEYAEAIKLNPNLGEAYYNLGLALHKRGQADA--- 132
Query: 127 GLGTSSSSREEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEI 186
+++ + L+ P A+A + LGL GQ +A+++Y++A I
Sbjct: 133 -----------AITAYRQALI----INPTMANAQYNLGLALYEKGQANEAIAAYQQA--I 175
Query: 187 LLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTR 246
L A L +Q E +LEE ++ +++++ +
Sbjct: 176 NLNSNNANAYFNLAIALQ---------------------EQGKLEEAIAAYRQTLKLNPD 214
Query: 247 QAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQ 306
AV +N +G +L G+ +++ + + PNN + NLG+A + G+ ++++ F+
Sbjct: 215 NAVAYNNMGSLLTIQGQTSEAVATYQTAIKRIPNNAEAYYNLGVALYNQGEFKKASSAFK 274
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 64/160 (40%), Gaps = 13/160 (8%)
Query: 251 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 310
+ LGL L K G+ ++I+ L ++P + NLG+A ++ G ++ +Q I
Sbjct: 117 YYNLGLALHKRGQADAAITAYRQALIINPTMANAQYNLGLALYEKGQANEAIAAYQQAIN 176
Query: 311 KDQNHPAALINYAALL---------LCKYGSVLA----GAGANTGEGACLDQASAVNVAK 357
+ N+ A N A L + Y L A A G+ L + A
Sbjct: 177 LNSNNANAYFNLAIALQEQGKLEEAIAAYRQTLKLNPDNAVAYNNMGSLLTIQGQTSEAV 236
Query: 358 ECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKA 397
A+K P A + NL A Y G+ + + ++A
Sbjct: 237 ATYQTAIKRIPNNAEAYYNLGVALYNQGEFKKASSAFKRA 276
Score = 39.7 bits (91), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 48/248 (19%), Positives = 91/248 (36%), Gaps = 28/248 (11%)
Query: 235 SKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQ 294
S ++++Q D+ A N LG I+L+ R +++ + + ++PN + NLG+A +
Sbjct: 67 SAFRQALQIDSNIAAAHNYLGNIMLQQSRFDAAVQEYAEAIKLNPNLGEAYYNLGLALHK 126
Query: 295 SGDMEQSAKCFQDLILKDQNHPAALINYAALLLCK---------YGSVL----AGAGANT 341
G + + ++ ++ + A N L K Y + A A
Sbjct: 127 RGQADAAITAYRQALIINPTMANAQYNLGLALYEKGQANEAIAAYQQAINLNSNNANAYF 186
Query: 342 GEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLE 401
L + + A LK +P A + N+ + + G + + A K
Sbjct: 187 NLAIALQEQGKLEEAIAAYRQTLKLNPDNAVAYNNMGSLLTIQGQTSEAVATYQTAIKRI 246
Query: 402 PNCMSTRYAVAVS---------------RIKDAERSQEPTEQLSWAGNEMASILREGDPV 446
PN Y + V+ R ++ R Q EQ + M + + +P
Sbjct: 247 PNNAEAYYNLGVALYNQGEFKKASSAFKRARNQYRKQGNIEQANKVEQLMQQVAQMQEPK 306
Query: 447 QIEPPIAW 454
Q + AW
Sbjct: 307 QPQVSQAW 314
>gi|222612959|gb|EEE51091.1| hypothetical protein OsJ_31796 [Oryza sativa Japonica Group]
Length = 357
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 63/135 (46%)
Query: 184 EEILLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQS 243
++L+R E D++ EL V+ A G L ++ P ++ + +++ +
Sbjct: 199 RQVLVRRELDLSAKELQEQVRSGDASATEYFELGAVMLRRKFYPAAIKYLQQAIQKWDRD 258
Query: 244 DTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAK 303
+ A V+N LG+ + +L SI + + P NLG AY Q D++ + K
Sbjct: 259 EQDLAQVYNALGVSYKRDNKLDKSIQQFEKAVELQPGYVTAWNNLGDAYEQKKDLKSALK 318
Query: 304 CFQDLILKDQNHPAA 318
F++++L D N+ A
Sbjct: 319 AFEEVLLFDPNNTVA 333
>gi|294495566|ref|YP_003542059.1| hypothetical protein Mmah_0891 [Methanohalophilus mahii DSM 5219]
gi|292666565|gb|ADE36414.1| TPR repeat-containing protein [Methanohalophilus mahii DSM 5219]
Length = 1022
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 104/276 (37%), Gaps = 47/276 (17%)
Query: 137 EKVSSLKTGLV---HVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEAD 193
+K L+T L V K P N A + GL+Y +LG A ++Y+K L E
Sbjct: 696 QKAGDLQTALYAYGRVVEKDPNNGDALYNRGLIYDKLGSFRNAANAYQK----YLNLEPK 751
Query: 194 IARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNT 253
L H A+ + N++ + +P + + ++SD
Sbjct: 752 DMDTWYLLAQSAHKARMYDVSLNAINTVIND-QPSNQDALY------LKSDN-------- 796
Query: 254 LGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQ 313
L K GR +I V +L DP N D + N G+A+ G +++ +C++ L+ +
Sbjct: 797 ----LEKMGRFSDAIVVYDEILESDPQNQDALFNKGLAFENIGQYQKAIECYEQLLDVNP 852
Query: 314 NHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHI 373
H A+ +G L N A L+ +P A
Sbjct: 853 QHVTAM---------------------EHKGFDLYLLGEYNKADVVYNQILEIEPNNADA 891
Query: 374 WANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRY 409
+ A YL + S ++ +++PNC++ Y
Sbjct: 892 LYHKATIKYLLSSYAGSIMYYDRLLEVKPNCITAWY 927
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 17/73 (23%), Positives = 38/73 (52%)
Query: 237 LKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSG 296
K+++ ++ +W+ ++ K+G LQ+++ ++ DPNN D + N G+ Y + G
Sbjct: 674 FKQALSVNSDSVQLWHKYAIVSQKAGDLQTALYAYGRVVEKDPNNGDALYNRGLIYDKLG 733
Query: 297 DMEQSAKCFQDLI 309
+A +Q +
Sbjct: 734 SFRNAANAYQKYL 746
Score = 38.5 bits (88), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 90/437 (20%), Positives = 159/437 (36%), Gaps = 66/437 (15%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEAD-----IARPELLSL-VQIHH 207
P + +A ++ GL ++L KA+ YEKA L E + P+L +L V
Sbjct: 86 PNSTYALYMAGLSLEKLASENKAIQYYEKALRNLKDTENQNITELVNNPDLETLPVLFLK 145
Query: 208 AQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSS 267
+ E + ++SL + + LS + ++N GL G + +
Sbjct: 146 GKISHLEGNYNDSLTYQ------DAALSAYGYHSED------LYNK-GLYHKNEGNHEDA 192
Query: 268 ISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYA---- 323
I + L ++P+ D LG Y G+ + + + + + N L+ Y
Sbjct: 193 IEHFQAALRINPSKTDSWAQLGECYEAIGEYQTAQDNYDKALQRKPNDSELLLKYGLVAE 252
Query: 324 -----ALLLCKYGSVLAGAGANTG----EGACLDQASAVNVAKECLLAALKADPKAAHIW 374
+L + Y VL N + L+ N A C ALK DP+ +W
Sbjct: 253 KMDDHSLAIEYYDRVLEIQPYNVDSWKYKARSLEALDQNNYALTCYNQALKYDPENKALW 312
Query: 375 ANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDA--------------E 420
G + S +C ++A KL P+ +A + R+ +A E
Sbjct: 313 NLKGQLLDKMGRYEESIECYDQALKLNPD-----HARGIGRVSEAPSIIISADSHEVFYE 367
Query: 421 RSQEPTEQLSWAGNEMASILR----------EGDPVQIEP-PIAWAGFAAVQKTHHEVAA 469
Q +E N+ + R D ++ EP + W A + K + + +
Sbjct: 368 TPQFDSEAAQTLFNKGEAFYRLEKYDDALECYNDVIETEPHAVVWYRKATILKNNGDFSE 427
Query: 470 AFETEENELSKMEECAGA---GESAFLDQASAVNVAKECLLAALKADPKAAHIWANLANA 526
A ++ E L +E A A ++ LD+ A + A + D W +A
Sbjct: 428 AIDSYEEALD-IESDAPAVWYEQAVLLDRIGEYRKAVKSYDEATERDENYTLAWYEMAVD 486
Query: 527 YYLTGDHRSSGKCLEKV 543
+ G + S +KV
Sbjct: 487 LKILGKYDQSLAAYDKV 503
>gi|334117447|ref|ZP_08491538.1| histidine kinase [Microcoleus vaginatus FGP-2]
gi|333460556|gb|EGK89164.1| histidine kinase [Microcoleus vaginatus FGP-2]
Length = 949
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 78/188 (41%), Gaps = 23/188 (12%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
+ E+ ++S+Q AV + L +G+L+ + L ++PNN +
Sbjct: 279 QFEKAWQFFEQSLQIKPDNAVTLSCYANALASNGQLEKAWQFFERSLQIEPNNQRILNQY 338
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLD 348
A +G E+ + + + + N P L +YA L A+TG+
Sbjct: 339 ATALASTGQHEKVVQILERSLQLEPNDPITLNHYATAL------------ASTGQHEK-- 384
Query: 349 QASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST- 407
E L +LK +P A + ANA TG H + + E++ +LEPN T
Sbjct: 385 -------TLELLKRSLKLEPNAPITLSRYANALASTGQHEKALQFFERSLQLEPNDAITL 437
Query: 408 -RYAVAVS 414
RYA A++
Sbjct: 438 SRYANALA 445
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 50/243 (20%), Positives = 92/243 (37%), Gaps = 49/243 (20%)
Query: 231 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 290
E+ + L+ +++ + + N L+K+ + + +L LL ++P N +
Sbjct: 145 EKAIGILESALKFEPGNKITLNVYAEALIKNENYRKAFDILERLLVIEPTNNTTVRTYAN 204
Query: 291 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYA--------------------------A 324
A +G E++ + F+ + ++ ++P L YA A
Sbjct: 205 ALASNGQFEKAQQIFERALQREPDNPITLSQYANALASNGQLDQALEFFERSLQIPPDDA 264
Query: 325 LLLCKYGSVLAGAGA-----------------NTGEGACLDQASAVN----VAKECLLAA 363
+ L +Y + LA G N +C A A N A + +
Sbjct: 265 VTLSRYANALASNGQFEKAWQFFEQSLQIKPDNAVTLSCYANALASNGQLEKAWQFFERS 324
Query: 364 LKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST--RYAVAVSRIKDAER 421
L+ +P I A A TG H + LE++ +LEPN T YA A++ E+
Sbjct: 325 LQIEPNNQRILNQYATALASTGQHEKVVQILERSLQLEPNDPITLNHYATALASTGQHEK 384
Query: 422 SQE 424
+ E
Sbjct: 385 TLE 387
>gi|94967946|ref|YP_589994.1| hypothetical protein Acid345_0917 [Candidatus Koribacter versatilis
Ellin345]
gi|94549996|gb|ABF39920.1| Tetratricopeptide repeat protein [Candidatus Koribacter versatilis
Ellin345]
Length = 566
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 75/182 (41%), Gaps = 23/182 (12%)
Query: 234 LSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYF 293
L K++ Q + + LGL + G + ++IS +A P N D +LG+A+
Sbjct: 238 LQNYKDAAQRSSEFPGLQERLGLTAQRVGEMPTAISAFQKAIAQSPQNPDLHNDLGLAFM 297
Query: 294 QSGDMEQSAKCF-QDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASA 352
Q+GD E + + F Q L LK ++ + Y L GA Q S
Sbjct: 298 QAGDGEGAIREFNQALNLKPED-----VGYLGNL-----------------GAAYLQLSE 335
Query: 353 VNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVA 412
+ A + AL+ P A + +LA L D + L +A +L+P Y +
Sbjct: 336 FDNAVDNFRKALQIAPANASLHHDLALTLKLKDDLAGAAAELREAIRLDPKLYDAHYTLG 395
Query: 413 VS 414
V+
Sbjct: 396 VT 397
>gi|297569640|ref|YP_003690984.1| TPR repeat-containing protein [Desulfurivibrio alkaliphilus AHT2]
gi|296925555|gb|ADH86365.1| TPR repeat-containing protein [Desulfurivibrio alkaliphilus AHT2]
Length = 212
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 75/176 (42%), Gaps = 21/176 (11%)
Query: 228 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 287
E+L +I+++L++ + L L+ K+GR+ +I L L +D + + N
Sbjct: 9 EQLNKIIAELEQKCADKPENVPAHHHLALVYRKAGRIDDAIRELEKCLELDEQSVEAYIN 68
Query: 288 LGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL 347
LG YF+ G+++Q A +N A+ + S A+ G
Sbjct: 69 LGAIYFEQGNLDQ----------------ALAVNLKAVKVLPEMS-----RAHNNIGLIK 107
Query: 348 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 403
Q A A++ DPK + W N+A+ + GD + + ++A KL P+
Sbjct: 108 QQQGDAAAAIAAYEEAVRHDPKLTNAWVNMASCRIMAGDFEQALQAAKEAIKLAPD 163
>gi|253998757|ref|YP_003050820.1| hypothetical protein Msip34_1046 [Methylovorus glucosetrophus
SIP3-4]
gi|253985436|gb|ACT50293.1| Tetratricopeptide TPR_2 repeat protein [Methylovorus glucosetrophus
SIP3-4]
Length = 566
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 91/190 (47%), Gaps = 24/190 (12%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQ--------- 204
PK A HF LG++ LG+ +A++SY KA I L+ + +A L +Q
Sbjct: 77 PKIAEIHFNLGVVLGHLGRMDEAIASYRKA--ISLKPDLAVAYFNLGFALQTLGRYEEAI 134
Query: 205 --IHHAQCLLP---ESSGDNSLDKELEPE-ELEEILSKLKESMQ--SDTRQAVVWNTLGL 256
A + P E+ G+ L L+ + ++E+ ++ +++++ +D R + L
Sbjct: 135 PSYRKAAAMQPTFYEAHGN--LGTVLQKQGKMEDAIASYRKALEIHADPRG---YFNLAT 189
Query: 257 ILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHP 316
L G+L+ +++ S L + P+ D NLG A G+M+++ K +Q + D H
Sbjct: 190 ALRDHGQLEDAVTAYRSALRMQPDYVDAWNNLGEALRDQGNMDEAVKAYQQALSLDAAHA 249
Query: 317 AALINYAALL 326
AA N A L
Sbjct: 250 AANYNLAEFL 259
>gi|91202600|emb|CAJ72239.1| hypothetical protein kustd1494 [Candidatus Kuenenia
stuttgartiensis]
Length = 847
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 100/256 (39%), Gaps = 46/256 (17%)
Query: 155 KNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPE 214
+ A H+ +G Y++ Q +A+SSY+KA L+ + D +
Sbjct: 561 RYATVHYNMGNAYKKKNQLPQAISSYKKA----LQIKQDYKQ------------------ 598
Query: 215 SSGDNSLDK-ELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 273
N+L K E E+ ++ + ++ D A N LG++ K G + +I+
Sbjct: 599 --AHNNLGKIYFEMEQYDDAFEEYNTALAIDPGFADAHNNLGVLYNKRGMDEDAIAAYKK 656
Query: 274 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSV 333
+A DP N D NLG Y E + + +Q + DQ
Sbjct: 657 AVAADPLNSDAYYNLGNVYESKNQFELAVEAYQSALAIDQ-------------------- 696
Query: 334 LAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKC 393
A A A+ GA D+ ++ A E A+K DP + NL + GD S+
Sbjct: 697 -ALAYAHNNLGALYDKKGILDKAIEEYRQAIKYDPLYPYAHNNLGASLAKKGDMDSALSE 755
Query: 394 LEKAAKLEPNCMSTRY 409
++A L P+ R+
Sbjct: 756 FQEAVHLLPDNPDFRF 771
Score = 38.9 bits (89), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 93/232 (40%), Gaps = 36/232 (15%)
Query: 98 NKLGKCRSRISSKMDSALEFGV---------DADGDQSGLGTSSSSREEKVSSLKTGLVH 148
N LGK + D+ E+ DA + L E+ +++ K +
Sbjct: 601 NNLGKIYFEMEQYDDAFEEYNTALAIDPGFADAHNNLGVLYNKRGMDEDAIAAYKKAVA- 659
Query: 149 VARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHA 208
P N+ A++ LG +Y+ Q AV +Y+ A I D A L H+
Sbjct: 660 ---ADPLNSDAYYNLGNVYESKNQFELAVEAYQSALAI------DQA------LAYAHNN 704
Query: 209 QCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSI 268
L + G LDK +E + +++++ D N LG L K G + S++
Sbjct: 705 LGALYDKKG--ILDKAIE---------EYRQAIKYDPLYPYAHNNLGASLAKKGDMDSAL 753
Query: 269 SVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALI 320
S + + P+N D NLG + + G+ + + F++ I +H AL
Sbjct: 754 SEFQEAVHLLPDNPDFRFNLGYVFLRMGNNALALQAFEETIRIKPSHTEALF 805
>gi|222053746|ref|YP_002536108.1| Exostosin family protein [Geobacter daltonii FRC-32]
gi|221563035|gb|ACM19007.1| Exostosin family protein [Geobacter daltonii FRC-32]
Length = 794
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 43/83 (51%)
Query: 239 ESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDM 298
+++Q RQ V N LGL ++SGRL + + +A+DP N + NL + +GD+
Sbjct: 29 QALQLAPRQPAVLNNLGLAYVESGRLDEAKVIFERFIALDPENAEPWNNLAVVVQMAGDL 88
Query: 299 EQSAKCFQDLILKDQNHPAALIN 321
E + + F+ + + + A N
Sbjct: 89 ETATELFRKALALNPQYAEAWYN 111
>gi|117924934|ref|YP_865551.1| hypothetical protein Mmc1_1636 [Magnetococcus marinus MC-1]
gi|117608690|gb|ABK44145.1| Tetratricopeptide TPR_2 repeat protein [Magnetococcus marinus MC-1]
Length = 968
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 75/188 (39%), Gaps = 21/188 (11%)
Query: 225 LEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDC 284
L+ +L++ ++ + + W +G LL +G+ ++ LA+DP +
Sbjct: 15 LQQGQLQQAINSYQNLLAQHPESVAAWQGIGSALLAAGQPLQAVDFFERALALDPQHYPS 74
Query: 285 IGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEG 344
I LG Y Q G +E++ + F N P N G VLA G
Sbjct: 75 ILALGTLYQQQGRLERAVQLFLRGAQLQPNQPLVHFN--------LGVVLAAQGRTEQAQ 126
Query: 345 ACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNC 404
+ +A A+N + P+A W NL N TG+ + + C ++A + P+
Sbjct: 127 SAYRKALALN----------ENIPEA---WLNLGNLLSRTGELQQALVCYQQALQRRPSF 173
Query: 405 MSTRYAVA 412
+ +A
Sbjct: 174 TQAGFGLA 181
Score = 38.5 bits (88), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 57/136 (41%), Gaps = 23/136 (16%)
Query: 171 GQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEEL 230
GQPL+AV +E+A + P +L+L ++ Q L
Sbjct: 52 GQPLQAVDFFERALAL-----DPQHYPSILALGTLYQQQG------------------RL 88
Query: 231 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 290
E + Q Q +V LG++L GR + + S LA++ N + NLG
Sbjct: 89 ERAVQLFLRGAQLQPNQPLVHFNLGVVLAAQGRTEQAQSAYRKALALNENIPEAWLNLGN 148
Query: 291 AYFQSGDMEQSAKCFQ 306
++G+++Q+ C+Q
Sbjct: 149 LLSRTGELQQALVCYQ 164
>gi|224135899|ref|XP_002327331.1| predicted protein [Populus trichocarpa]
gi|222835701|gb|EEE74136.1| predicted protein [Populus trichocarpa]
Length = 225
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 68/143 (47%), Gaps = 1/143 (0%)
Query: 176 AVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILS 235
V ++ ++L+R E D++ EL ++ + L E G L ++ P + +L
Sbjct: 60 GVGTFFVIRQVLMRRELDLSAKELQAIRSGDASATGLFEL-GAVMLRRKFYPAATKYLLQ 118
Query: 236 KLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQS 295
+++ D A V+N LG+ + G+L I + + + P NLG AY +
Sbjct: 119 AIEKWDGEDQDLAQVYNALGVSYILDGKLDKGIKQFEAAVKLQPGYVTAWNNLGDAYEKK 178
Query: 296 GDMEQSAKCFQDLILKDQNHPAA 318
D++ + K F++++L D N+ A
Sbjct: 179 KDLKSALKAFEEVLLFDPNNKVA 201
>gi|443328579|ref|ZP_21057175.1| TPR repeat-containing protein [Xenococcus sp. PCC 7305]
gi|442791878|gb|ELS01369.1| TPR repeat-containing protein [Xenococcus sp. PCC 7305]
Length = 1614
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 107/298 (35%), Gaps = 37/298 (12%)
Query: 114 ALEFGVDADGDQSGLGTSSSSREEKVSSLKTGLVHVARKMPK--------NAHAHFLLGL 165
+L+ G DA Q LG + R +S L V AR + + A AH L G
Sbjct: 446 SLQVGEDASQIQPWLG---NGRVYDLSPLLKDFVDTARVIEQLDLVITVDTAVAH-LAGA 501
Query: 166 MYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLDKEL 225
M G+P+ + LL C+ P + Q L L
Sbjct: 502 M----GKPVWVLLPCVPDWRWLLECQDSPWYPTMRLFRQPKRGDWASVFEQVKKKLQAVL 557
Query: 226 EPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCI 285
E E + +L +Q + LG+ KSG++ ++ S +L P++
Sbjct: 558 EGESPIFPVKRLTIQLQPTNHTEIKKFELGIKHYKSGQISAAQSCFQEVLQEQPDHVIAY 617
Query: 286 GNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGA 345
NLG+ Y + D ++ KC+ I + N A ++ G
Sbjct: 618 FNLGVIYEKQRDWSKALKCYHRAIQLNPN---------------------DARFHSNMGN 656
Query: 346 CLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 403
+ +N A EC A+K P + NL Y G + +C +KA L+P+
Sbjct: 657 IYLKKVQLNQAFECYQRAIKTQPDYVQAYTNLGKVYLDQGKSAEAFQCNQKAIALKPD 714
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 64/167 (38%), Gaps = 21/167 (12%)
Query: 237 LKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSG 296
+E +Q + + LG+I K ++ + ++PN+ N+G Y +
Sbjct: 603 FQEVLQEQPDHVIAYFNLGVIYEKQRDWSKALKCYHRAIQLNPNDARFHSNMGNIYLKKV 662
Query: 297 DMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVA 356
+ Q+ +C+Q I ++ A N G V G + C +A
Sbjct: 663 QLNQAFECYQRAIKTQPDYVQAYTN--------LGKVYLDQGKSAEAFQCNQKA------ 708
Query: 357 KECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 403
ALK D AH +NLA Y ++ C +KA L+P+
Sbjct: 709 -----IALKPDYAEAH--SNLAVVYQELEQFDNAITCCQKAISLKPD 748
>gi|405973294|gb|EKC38016.1| Bardet-Biedl syndrome 4 protein [Crassostrea gigas]
Length = 583
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/157 (20%), Positives = 66/157 (42%), Gaps = 21/157 (13%)
Query: 246 RQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCF 305
R + + LG I L G ++++I + + P N D + LG+ Y Q G +++ +
Sbjct: 190 RHEISYVMLGKIHLMEGNIEAAIEIYKQAVEYSPENPDMLTTLGLLYMQVGQYQRAFENL 249
Query: 306 QDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALK 365
+ + D +H A+++ G+ + +VA A
Sbjct: 250 GNAMTYDPSHVKAIMS---------------------AGSMMQTHGDFDVALNKYRIAAV 288
Query: 366 ADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 402
A P++ +W N+ A++ + ++ CL++A L P
Sbjct: 289 ATPESPPLWNNIGMAFFGKKKYVAAISCLKRANYLAP 325
>gi|403213589|emb|CCK68091.1| hypothetical protein KNAG_0A04120 [Kazachstania naganishii CBS
8797]
Length = 602
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 80/215 (37%), Gaps = 30/215 (13%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
+L E + ++Q + W LGL+ +++ + + IS L + L +DPNN D + NL
Sbjct: 314 KLSEAAMAFEAAVQEKEQHIDAWLKLGLVQIQNEKEINGISALENCLKLDPNNLDAMKNL 373
Query: 289 GIAYFQSGDMEQSAKCF-------------------------QDLILKDQNHPAALINYA 323
I+Y G A F L+ + P +L
Sbjct: 374 AISYINEG---YDASAFTILNKWIETKYSTIDTSSPEIITDGHKLVESEMEDPLSLSEKI 430
Query: 324 ALLLCKYGSVLAGAGANTG--EGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAY 381
K + L ++ G N +C AL+ +P +W L A
Sbjct: 431 TKRFLKLANQLPVVDSDVQLCLGLLFYANDDFNKTIDCFKTALQVNPNDELMWNRLGAAL 490
Query: 382 YLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRI 416
+ S K +A +L+P+ + RY +AVS +
Sbjct: 491 ANSNRSEESIKAYHRALQLKPSFVRARYNLAVSSM 525
>gi|73670401|ref|YP_306416.1| hypothetical protein Mbar_A2941 [Methanosarcina barkeri str.
Fusaro]
gi|72397563|gb|AAZ71836.1| hypothetical protein Mbar_A2941 [Methanosarcina barkeri str.
Fusaro]
Length = 560
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 84/206 (40%), Gaps = 29/206 (14%)
Query: 199 LLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLIL 258
L+ L I+HA +S N ++ +E E+ L + +S+ D WN G +L
Sbjct: 350 LVGLYTIYHA------NSPYNEVNDLMELGRDEDALKVINKSIDIDPNNDYAWNIKGNVL 403
Query: 259 LKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAA 318
GR ++ +A++PN D + G A ++ G +++ L+ N A
Sbjct: 404 YHLGRYDEALQAYDKAIAINPNYVDAWNSKGNALYRLGKYDEA--------LQASNKAIA 455
Query: 319 L-INYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANL 377
+ NYA K G+ L G G D+A A+N P A+ W
Sbjct: 456 INPNYADAWNGK-GNALYGLGRYDEALQAYDKAIAIN-------------PNYAYAWNGK 501
Query: 378 ANAYYLTGDHRSSGKCLEKAAKLEPN 403
NA Y G + + + +KA + PN
Sbjct: 502 GNALYRLGRYDEALQAYDKAIAINPN 527
>gi|301058162|ref|ZP_07199214.1| tetratricopeptide repeat protein [delta proteobacterium NaphS2]
gi|300447794|gb|EFK11507.1| tetratricopeptide repeat protein [delta proteobacterium NaphS2]
Length = 482
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 76/190 (40%), Gaps = 21/190 (11%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
+L+E L + ++++Q AV + +GLI + G + ++ + + P N N
Sbjct: 273 KLDEALLQYEKALQLRPNFAVAHDNMGLIFMAKGNIPEAVKHTGMAVRIRPGNAIIQNNY 332
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLD 348
G + G +E++AK F A + +Y A A G L
Sbjct: 333 GQLLLRQGRIEEAAKHFYQ---------------AVRIKPRY------AKAQNNLGIALA 371
Query: 349 QASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTR 408
Q + AKE LL A + DP I N+ + L G+ + + + E + PN
Sbjct: 372 QQKKLKEAKEHLLLAARLDPNNPEILNNVGQVFMLQGNSKEAVRYFEATIQQNPNFAQAL 431
Query: 409 YAVAVSRIKD 418
+ R+K+
Sbjct: 432 TNLGFMRLKE 441
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 84/189 (44%), Gaps = 21/189 (11%)
Query: 149 VARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHA 208
V K P N A++ LG + QR G+ +A+ YEKA + LR +A ++ I A
Sbjct: 250 VTSKSPHNHRAYYNLGNVLQRRGKLDEALLQYEKALQ--LRPNFAVAHD---NMGLIFMA 304
Query: 209 QCLLPESSGDNSLDKELEPE----------------ELEEILSKLKESMQSDTRQAVVWN 252
+ +PE+ + + P +EE ++++ R A N
Sbjct: 305 KGNIPEAVKHTGMAVRIRPGNAIIQNNYGQLLLRQGRIEEAAKHFYQAVRIKPRYAKAQN 364
Query: 253 TLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKD 312
LG+ L + +L+ + L +DPNN + + N+G + G+ +++ + F+ I ++
Sbjct: 365 NLGIALAQQKKLKEAKEHLLLAARLDPNNPEILNNVGQVFMLQGNSKEAVRYFEATIQQN 424
Query: 313 QNHPAALIN 321
N AL N
Sbjct: 425 PNFAQALTN 433
>gi|434402457|ref|YP_007145342.1| Tfp pilus assembly protein PilF [Cylindrospermum stagnale PCC 7417]
gi|428256712|gb|AFZ22662.1| Tfp pilus assembly protein PilF [Cylindrospermum stagnale PCC 7417]
Length = 496
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 65/299 (21%), Positives = 117/299 (39%), Gaps = 46/299 (15%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEI-----LLRCEADIARPELL----SLVQ 204
P A A++ G LG A++ Y++A +I + AR +L ++
Sbjct: 128 PNFADAYYNRGNARAELGDMPGAITDYDQAIKINPNFAVAYYNRGNARAKLGDMQGAITD 187
Query: 205 IHHAQCLLPESSGDNSLDKELEPE--ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSG 262
+ A + P + + L E +++ ++ L ++++ + A + G + K G
Sbjct: 188 FNQAININPNYAEAYTNRGTLRAELGDMQGAITDLNQAIKINPNFAKAYYNRGTLRGKLG 247
Query: 263 RLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINY 322
+Q +I+ L+ + ++PN + GN G A + GDM+ + F I + N P N
Sbjct: 248 DMQGAITDLNQAIKINPNYTEAYGNRGNARAELGDMQTAITDFNQAIKTNPNDPLPYNNR 307
Query: 323 A---ALLLCKYGSV------------LAGAGANTG---------EGACLDQASAVNVAKE 358
A A L G++ A A N G +GA D A+N+
Sbjct: 308 ANARAKLGDMQGAITDFNQAININPNYANAYKNRGFVRAKLGDMQGAITDYNQAINI--- 364
Query: 359 CLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIK 417
+P A + N NA Y GD + + +A + PN + +R K
Sbjct: 365 --------NPNYADAYFNRGNARYKLGDMQGAITDYNQAININPNFADAYFNRGNARYK 415
Score = 43.5 bits (101), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 34/176 (19%), Positives = 71/176 (40%), Gaps = 21/176 (11%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
+++ ++ ++++++ + +N K G +Q +I+ + + ++PN + N
Sbjct: 282 DMQTAITDFNQAIKTNPNDPLPYNNRANARAKLGDMQGAITDFNQAININPNYANAYKNR 341
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLD 348
G + GDM+ + + I + N+ A N K G + +GA D
Sbjct: 342 GFVRAKLGDMQGAITDYNQAININPNYADAYFNRGNARY-KLGDM---------QGAITD 391
Query: 349 QASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNC 404
A+N+ +P A + N NA Y GD + + +A + PN
Sbjct: 392 YNQAINI-----------NPNFADAYFNRGNARYKLGDMQGAITDYNQAININPNF 436
>gi|170575722|ref|XP_001893358.1| TPR Domain containing protein [Brugia malayi]
gi|158600696|gb|EDP37806.1| TPR Domain containing protein [Brugia malayi]
Length = 247
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 75/175 (42%), Gaps = 23/175 (13%)
Query: 222 DKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNN 281
D+ LE E+L L+++++ A W LGL L R + + + L++
Sbjct: 71 DRNLEAEQL------LRKAIKIRPNFAAAWMNLGLAQLAQKRYKDAENSFEQALSLRFPY 124
Query: 282 CDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL--------------- 326
DC+ N+G+ Y Q + + +Q++ + +H A +N LL
Sbjct: 125 PDCLYNMGLLYLQQNQKTYAREIWQNITRANPSHKQAWLNLLVLLDETNNCAEVISLADK 184
Query: 327 LCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAY 381
+ KY S A + G C + + A++ LL+A++ +P A W N+ +
Sbjct: 185 VLKYHS--KDASILSQLGTCYGKLGQYDSAEKFLLSAVELEPTAITYWKNIGRWF 237
>gi|325106717|ref|YP_004267785.1| methyltransferase type 11 [Planctomyces brasiliensis DSM 5305]
gi|324966985|gb|ADY57763.1| Methyltransferase type 11 [Planctomyces brasiliensis DSM 5305]
Length = 1391
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 103/253 (40%), Gaps = 47/253 (18%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 213
P +A A LLG++ + G+ L AV E+A + L+ +A + R L S +
Sbjct: 39 PNHAQALHLLGVIDHQRGEHLAAVEKIERA--LKLKPDAVLFRKNLASAAR--------- 87
Query: 214 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 273
S+G +LE+ + + ++ + V++ LG I + +
Sbjct: 88 -SAG-----------QLEKARKSCENVLAAEPNEPVMFTLLGRICETEEKWTEAARHYEE 135
Query: 274 LLAVDPNNCDCIG---NLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKY 330
L + NN + + +LG Y + G + +C++D+I +D H A+ N A L ++
Sbjct: 136 SLRIGLNNSETLETLLHLGDCYSKVGRSTDAERCYRDIIDRDPWHLFAVHNLAREL--QF 193
Query: 331 GSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSS 390
LA A + L DP A W NL Y G+ +
Sbjct: 194 AGKLAAA-------------------ESFYEQTLDIDPNCASAWNNLGVVYQTRGNFSEA 234
Query: 391 GKCLEKAAKLEPN 403
+C+EKA +L P+
Sbjct: 235 RRCMEKARQLLPS 247
>gi|40063716|gb|AAR38497.1| TPR repeat protein [uncultured marine bacterium 583]
Length = 733
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 80/189 (42%), Gaps = 15/189 (7%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
EL+E + ++++ A V LGL L G+L +++ +A+ P+ + NL
Sbjct: 56 ELDEAVKSFEKALAIKPDYAEVHYNLGLTLQDLGQLDAAVKSYEKAIAIKPDYANACNNL 115
Query: 289 GIAYFQSGDMEQSAKCFQ-------DLILKDQNHPAALINYAAL---LLCKYGSVLA--- 335
G+ G ++ + K ++ D + N AL N L + C Y LA
Sbjct: 116 GVTLQDLGQLDAAVKSYEKAIAIKPDFSDANNNLGIALKNLGQLDAAVEC-YKKALAIKP 174
Query: 336 -GAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCL 394
A A+ G L ++ A EC AL P A NL NA G ++ KC
Sbjct: 175 DYAEAHYNLGNALKNLGQLDAAVECYKKALAIKPDYADACNNLGNALKNLGQLDAAVKCY 234
Query: 395 EKAAKLEPN 403
EKA ++P+
Sbjct: 235 EKAVAIKPD 243
Score = 42.7 bits (99), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 99/241 (41%), Gaps = 27/241 (11%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARP------ELLSLVQI-- 205
P A H+ LGL Q LGQ AV SYEKA + + D A L L Q+
Sbjct: 72 PDYAEVHYNLGLTLQDLGQLDAAVKSYEKA----IAIKPDYANACNNLGVTLQDLGQLDA 127
Query: 206 -----HHAQCLLPE-SSGDNSLDKELEP-EELEEILSKLKESMQSDTRQAVVWNTLGLIL 258
A + P+ S +N+L L+ +L+ + K+++ A LG L
Sbjct: 128 AVKSYEKAIAIKPDFSDANNNLGIALKNLGQLDAAVECYKKALAIKPDYAEAHYNLGNAL 187
Query: 259 LKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAA 318
G+L +++ LA+ P+ D NLG A G ++ + KC++ + ++ A
Sbjct: 188 KNLGQLDAAVECYKKALAIKPDYADACNNLGNALKNLGQLDAAVKCYEKAVAIKPDYAEA 247
Query: 319 LINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLA 378
N GSV+ A + A A+ + +L L + + IW +LA
Sbjct: 248 YHN--------NGSVMRRLKRQDEALASYESAIAIKPNLDFILGDLLSTKMSLCIWDDLA 299
Query: 379 N 379
+
Sbjct: 300 H 300
Score = 42.7 bits (99), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 80/204 (39%), Gaps = 13/204 (6%)
Query: 213 PESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLS 272
P + NSL +++E L + ++ +++N G+ G L ++
Sbjct: 6 PPQTEINSLIALYSSGQIQEALDSVGALIKEYPNDPLLYNLSGICYKTIGELDEAVKSFE 65
Query: 273 SLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL------ 326
LA+ P+ + NLG+ G ++ + K ++ I ++ A N L
Sbjct: 66 KALAIKPDYAEVHYNLGLTLQDLGQLDAAVKSYEKAIAIKPDYANACNNLGVTLQDLGQL 125
Query: 327 ---LCKYGSVLA----GAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLAN 379
+ Y +A + AN G L ++ A EC AL P A NL N
Sbjct: 126 DAAVKSYEKAIAIKPDFSDANNNLGIALKNLGQLDAAVECYKKALAIKPDYAEAHYNLGN 185
Query: 380 AYYLTGDHRSSGKCLEKAAKLEPN 403
A G ++ +C +KA ++P+
Sbjct: 186 ALKNLGQLDAAVECYKKALAIKPD 209
>gi|313200841|ref|YP_004039499.1| hypothetical protein MPQ_1099 [Methylovorus sp. MP688]
gi|312440157|gb|ADQ84263.1| Tetratricopeptide TPR_2 repeat protein [Methylovorus sp. MP688]
Length = 566
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 91/190 (47%), Gaps = 24/190 (12%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQ--------- 204
PK A HF LG++ LG+ +A++SY KA I L+ + +A L +Q
Sbjct: 77 PKIAEIHFNLGVVLGHLGRMDEAIASYRKA--ISLKPDLAVAYFNLGFALQTLGRYEEAI 134
Query: 205 --IHHAQCLLP---ESSGDNSLDKELEPE-ELEEILSKLKESMQ--SDTRQAVVWNTLGL 256
A + P E+ G+ L L+ + ++E+ ++ +++++ +D R + L
Sbjct: 135 PSYRKAAAMQPTFYEAHGN--LGTVLQKQGKMEDAIASYRKALEIHADPRG---YFNLAT 189
Query: 257 ILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHP 316
L G+L+ +++ S L + P+ D NLG A G+M+++ K +Q + D H
Sbjct: 190 ALRDHGQLEDAVTAYRSALRMQPDYVDAWNNLGEALRDQGNMDEAVKAYQHALSLDAAHA 249
Query: 317 AALINYAALL 326
AA N A L
Sbjct: 250 AANYNLAEFL 259
>gi|222622881|gb|EEE57013.1| hypothetical protein OsJ_06783 [Oryza sativa Japonica Group]
Length = 1004
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 69/163 (42%), Gaps = 15/163 (9%)
Query: 254 LGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQ 313
LG I + I+ LA+DPN +C GN+ A+ + GD++ + + + I
Sbjct: 118 LGAIYYQIRNYDMCIAKNEEALAIDPNFAECYGNMANAWKEKGDVDLAIRYYLTAIQLRP 177
Query: 314 NHPAALINYAALLLCKYGSVLAGA--------------GANTGEGACLDQASAVNVAKEC 359
N A N A+ K G + A A++ G + + A C
Sbjct: 178 NFCDAWSNLASAYTWK-GRLNEAAQCCRQALAINPRLVDAHSNLGNLMKAQGFIQEAYNC 236
Query: 360 LLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 402
+ AL+ DP+ A W+NLA + GD + ++A KL+P
Sbjct: 237 YIEALRIDPQFAIAWSNLAGLFMEAGDLDKALLYYKEAVKLKP 279
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 112/268 (41%), Gaps = 46/268 (17%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELL----SLVQIHHAQ 209
P A A+ G +Y+ +G +A+ SY++A + ARP+ +L I++ Q
Sbjct: 279 PSFADAYLNQGNVYKTMGMSQEAIISYQRAVQ---------ARPDYAMAYGNLATIYYEQ 329
Query: 210 CLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSIS 269
+L+ + +++ D + +N +G L +GR++ +I+
Sbjct: 330 ------------------GQLDIAIRCYNQAIICDPQFVEAYNNMGNALKDAGRVKEAIN 371
Query: 270 VLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLI-----LKDQNHPAALI---- 320
S LA+ N+ + NLG Y + + +A ++ I L + A+I
Sbjct: 372 CYRSCLALQANHPQALTNLGNIYMEWNLISAAASFYKAAISVTSGLSSPLNNLAVIYKQQ 431
Query: 321 -NYAALLLCKYGSVL----AGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWA 375
NYA + C Y VL A A G + VN A + + A P A A
Sbjct: 432 GNYADAITC-YTEVLRVDPTAADALVNRGNTFKEIGRVNEAIQDYIQAATIRPTMAEAHA 490
Query: 376 NLANAYYLTGDHRSSGKCLEKAAKLEPN 403
NLA+AY +G ++ ++A +L P+
Sbjct: 491 NLASAYKDSGHVETAIVSYKQALRLRPD 518
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 86/203 (42%), Gaps = 16/203 (7%)
Query: 231 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 290
+E + + ++Q+ A+ + L I + G+L +I + + DP + N+G
Sbjct: 299 QEAIISYQRAVQARPDYAMAYGNLATIYYEQGQLDIAIRCYNQAIICDPQFVEAYNNMGN 358
Query: 291 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGA-------GANTGE 343
A +G ++++ C++ + NHP AL N + + ++ + A A +G
Sbjct: 359 ALKDAGRVKEAINCYRSCLALQANHPQALTNLGNIYM-EWNLISAAASFYKAAISVTSGL 417
Query: 344 GACLDQASAV-----NVAK--ECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEK 396
+ L+ + + N A C L+ DP AA N N + G + + +
Sbjct: 418 SSPLNNLAVIYKQQGNYADAITCYTEVLRVDPTAADALVNRGNTFKEIGRVNEAIQDYIQ 477
Query: 397 AAKLEPNCMSTRYAVAVSRIKDA 419
AA + P M+ +A S KD+
Sbjct: 478 AATIRPT-MAEAHANLASAYKDS 499
Score = 42.4 bits (98), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 75/192 (39%), Gaps = 24/192 (12%)
Query: 251 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 310
W+ L GRL + LA++P D NLG G ++++ C+ + +
Sbjct: 183 WSNLASAYTWKGRLNEAAQCCRQALAINPRLVDAHSNLGNLMKAQGFIQEAYNCYIEALR 242
Query: 311 KDQNHPAALINYAALLL---------------CKYGSVLAGAGANTGEGACLDQASAVNV 355
D A N A L + K A A N G + + +
Sbjct: 243 IDPQFAIAWSNLAGLFMEAGDLDKALLYYKEAVKLKPSFADAYLNQG-----NVYKTMGM 297
Query: 356 AKECLLA---ALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVA 412
++E +++ A++A P A + NLA YY G + +C +A +P + Y
Sbjct: 298 SQEAIISYQRAVQARPDYAMAYGNLATIYYEQGQLDIAIRCYNQAIICDPQFVEA-YNNM 356
Query: 413 VSRIKDAERSQE 424
+ +KDA R +E
Sbjct: 357 GNALKDAGRVKE 368
>gi|220922062|ref|YP_002497363.1| hypothetical protein Mnod_2075 [Methylobacterium nodulans ORS 2060]
gi|219946668|gb|ACL57060.1| TPR repeat-containing protein [Methylobacterium nodulans ORS 2060]
Length = 292
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 45/92 (48%)
Query: 234 LSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYF 293
++ L + +Q + A +NT G ++G +I+ + + +DPN+ N +AY
Sbjct: 56 IASLSDVIQRNPNDAAAYNTRGAAYARAGSYNEAIADFTKAIQLDPNSASAYSNRALAYR 115
Query: 294 QSGDMEQSAKCFQDLILKDQNHPAALINYAAL 325
QSG + + + F I D N+ AA I A L
Sbjct: 116 QSGRNDSALQDFTRAINADPNYSAAYIGRANL 147
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 78/197 (39%), Gaps = 31/197 (15%)
Query: 106 RISSKMDSALE---FGVDADGDQSGLGTSSSSREEKVSSLK---TGLVHVARKMPKNAHA 159
R S + DSAL+ ++AD + S ++ + + + + + L R P++A A
Sbjct: 115 RQSGRNDSALQDFTRAINADPNYSAAYIGRANLQRALGNYEAAYSDLSQAIRLTPESAEA 174
Query: 160 HFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESSGDN 219
+ GL+ Q GQ A+ ++ A I R ++ Q L+ N
Sbjct: 175 YHARGLVRQAQGQHRAAIGDFDAA----------IDRNPFVNAPYAARGQSLIAT----N 220
Query: 220 SLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDP 279
DK +E ++ + + A W GL KSGR Q ++ A+DP
Sbjct: 221 QFDKAIE---------DYNAALNVNNKDADSWAYRGLAYEKSGRRQEAMESYQRASAIDP 271
Query: 280 NNCDCIGNLGIAYFQSG 296
NN + G+ Q G
Sbjct: 272 NN--AVARQGLGRVQGG 286
>gi|170094074|ref|XP_001878258.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164646712|gb|EDR10957.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 793
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 80/192 (41%), Gaps = 28/192 (14%)
Query: 216 SGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLL 275
SG S+D E+LE+ ++ + ++++D R W LG L+ +++ + +
Sbjct: 609 SGHESID-----EDLEKAINFFQSALRADPRHYNAWYGLGTCYLRMSKIRLAEYHYRKAV 663
Query: 276 AVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLI-LKDQNHPAALINYAALLLCKYGSVL 334
+ PNN +G +G+A + GD + + F + + L N AL+ Y
Sbjct: 664 EIHPNNAVLLGCVGMAVDRRGDRDAALALFDEAVRLAPDN---ALVRYR----------- 709
Query: 335 AGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCL 394
L A E L++ + P+ +++ LA Y L GD +S K L
Sbjct: 710 --------RAKILVSMRKYERAVEDLVSLRNSTPEESNVVFQLAKVYRLLGDEVNSAKTL 761
Query: 395 EKAAKLEPNCMS 406
A + P M+
Sbjct: 762 ALARDISPKSMN 773
>gi|345871985|ref|ZP_08823926.1| Tetratricopeptide TPR_2 repeat-containing protein [Thiorhodococcus
drewsii AZ1]
gi|343919796|gb|EGV30539.1| Tetratricopeptide TPR_2 repeat-containing protein [Thiorhodococcus
drewsii AZ1]
Length = 2237
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 80/205 (39%), Gaps = 15/205 (7%)
Query: 252 NTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILK 311
N LG L GRL ++ +L +DP N+G A G +++ C+ +L
Sbjct: 1642 NALGSALQHLGRLSEALGCFQRVLDIDPRFVLAYANMGAALSDLGRFDEALNCYDQALLI 1701
Query: 312 DQNHPAALINYAALL--LCKYGSVLAG-----------AGANTGEGACLDQASAVNVAKE 358
+Q+ N + L + ++ LA A G L A
Sbjct: 1702 NQDSAEVHANRSLTLYRMGRFEDALASFDHLLNIRPDDVDALNKRGILLQNCGRFREALA 1761
Query: 359 CLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRY-AVAVSRIK 417
AAL P++A N N + GD ++ C +A ++PN + + + +
Sbjct: 1762 SFDAALVVKPESADALTNRGNVFKDQGDLETASSCYRQAMGIQPNLIEAWHNRLLCLNYQ 1821
Query: 418 DA-ERSQEPTEQLSWAGNEMASILR 441
DA R Q E LS+ ++ +S+ R
Sbjct: 1822 DAVSRDQVYAEHLSFDRHQASSVFR 1846
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 49/109 (44%), Gaps = 8/109 (7%)
Query: 246 RQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCF 305
R W LG L+K R + ++ L + + P + +CI LG A G + ++ CF
Sbjct: 1602 RAMFGWKILGTTLVKLNRHEDALPHLLAANRLAPGDAECINALGSALQHLGRLSEALGCF 1661
Query: 306 QDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVN 354
Q ++ D P ++ YA + G+ L+ G C DQA +N
Sbjct: 1662 QRVLDID---PRFVLAYANM-----GAALSDLGRFDEALNCYDQALLIN 1702
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 66/167 (39%), Gaps = 15/167 (8%)
Query: 251 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 310
W LG IL+K R +++I L + + P + I NLG A E++ CF+ I
Sbjct: 897 WKALGTILVKIERNEAAIPYLLEAIRLCPEEDESIHNLGYALLNLSRFEEAIGCFKRAIE 956
Query: 311 KDQNHPAALIN----------YAALLLCKYGSVL----AGAGANTGEGACLDQASAVNVA 356
+ ++ A IN + + C Y L + G LD+ + A
Sbjct: 957 INPDYVEAHINLGTSYKDTNRFDEAMKC-YDKALDLNPENPEVHCNRGVALDELGRLGEA 1015
Query: 357 KECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 403
+ + AL+ P NL N Y G + C KA + +P+
Sbjct: 1016 VDSQIRALELLPIYPQAHNNLGNVYKNIGLLDDAVSCYRKALESQPD 1062
>gi|430741335|ref|YP_007200464.1| hypothetical protein Sinac_0326 [Singulisphaera acidiphila DSM
18658]
gi|430013055|gb|AGA24769.1| tetratricopeptide repeat protein [Singulisphaera acidiphila DSM
18658]
Length = 779
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 72/171 (42%), Gaps = 23/171 (13%)
Query: 151 RKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQC 210
R P +A A+F G + + K ++ Y +A +R + D A P + HA
Sbjct: 201 RLDPDDASAYFNRGYAWSKKKDYDKTIADYNEA----IRLDPDDA-PTYFNRA---HAWS 252
Query: 211 LLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISV 270
+ E+ ++ ++ E+++ D A + G + G L +I+
Sbjct: 253 ---------------QKEDYDKTIADYNEAIRLDPDDASAYFNRGHAWSQKGDLDKAIAD 297
Query: 271 LSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALIN 321
+ + +DP N N G A+ Q GD++++ F + I D N +A +N
Sbjct: 298 YNETIRLDPTNTPAYFNRGYAWNQKGDLDKAIADFDEAIRLDPNDASAYVN 348
Score = 43.5 bits (101), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 79/410 (19%), Positives = 150/410 (36%), Gaps = 60/410 (14%)
Query: 135 REEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADI 194
+EE ++ + R P +A A+F G + + KA++ Y +A +R +
Sbjct: 121 KEEDIAEYDEAI----RLNPNDASAYFNRGYAWSERQEYDKAIADYNEA----IRLD--- 169
Query: 195 ARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTL 254
P+L + H+ S N DK ++ E+++ D A +
Sbjct: 170 --PQLT--LAYHNRGYAW---SQKNDYDK---------AITDYNEAIRLDPDDASAYFNR 213
Query: 255 GLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQN 314
G K +I+ + + +DP++ N A+ Q D +++ + + I D +
Sbjct: 214 GYAWSKKKDYDKTIADYNEAIRLDPDDAPTYFNRAHAWSQKEDYDKTIADYNEAIRLDPD 273
Query: 315 HPAALINYAALL---------LCKYGSVLAGAGANT----GEGACLDQASAVNVAKECLL 361
+A N + Y + NT G +Q ++ A
Sbjct: 274 DASAYFNRGHAWSQKGDLDKAIADYNETIRLDPTNTPAYFNRGYAWNQKGDLDKAIADFD 333
Query: 362 AALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAER 421
A++ DP A + N A+ G+H + +A +L+P T ++R
Sbjct: 334 EAIRLDPNDASAYVNQGCAWGEKGEHDKAIADFNEAIRLDP----TNTWAYLNRSHAWSE 389
Query: 422 SQEPTEQLSWAGNEMASILREGDPVQIEPPIAWA----GFAAVQKTHHEVAAAFETEENE 477
+E + ++ NE+ ++++P AWA G+A +K H+ A A + E
Sbjct: 390 KEEYDKAIA-DANEI---------IRLDPQNAWAYFKRGYAWGKKKEHDKAIADDNEAIR 439
Query: 478 LSKMEECAGAGESAFLDQASAVNVAKECLLAALKADPKAAHIWANLANAY 527
L A D+ + A A++ DP + WA Y
Sbjct: 440 LDPTNAWAYLNRGYAWDEKEEHDKAITDFNKAIRLDP--TNTWAYFNRGY 487
Score = 42.0 bits (97), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 85/211 (40%), Gaps = 17/211 (8%)
Query: 228 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 287
+E ++ ++ E+++ D A + G + +I+ + + +DP N N
Sbjct: 425 KEHDKAIADDNEAIRLDPTNAWAYLNRGYAWDEKEEHDKAITDFNKAIRLDPTNTWAYFN 484
Query: 288 LGIAYFQSGDMEQSAKCFQDLILKDQNHPAALIN--YAALLLCKYGSVLA---------- 335
G A+ Q D +++ F + I D N+ +A +N YA Y +A
Sbjct: 485 RGYAWGQKEDYDKAIADFNEAIQLDPNYTSAYLNRGYAWSQKNDYDKAIADFNKAIRLDP 544
Query: 336 -GAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCL 394
A A G Q + A A++ DP A + N +A T +H +
Sbjct: 545 INAPAYFNRGHAWSQKEGYDKAIADYNEAIRLDPNNALAYLNRGHARSKTQEHDKAIADY 604
Query: 395 EKAAKLEP---NCMSTRYAVAVSRIKDAERS 422
+A +++P N R A+ SR KD +++
Sbjct: 605 NEAIRIDPKAANAYIYR-AITWSRKKDYDKA 634
>gi|328947737|ref|YP_004365074.1| hypothetical protein Tresu_0849 [Treponema succinifaciens DSM 2489]
gi|328448061|gb|AEB13777.1| Tetratricopeptide TPR_2 repeat-containing protein [Treponema
succinifaciens DSM 2489]
Length = 887
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 70/346 (20%), Positives = 132/346 (38%), Gaps = 49/346 (14%)
Query: 241 MQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQ 300
++SD + + ++LG + +KSG + +++ S ++ +D N + + +LG Y + +
Sbjct: 35 LKSDPQNIELLSSLGNLYVKSGDDEKALAYFSEIIRIDSKNVEALNSLGGIYRRLKKYDD 94
Query: 301 SAKCFQDLILKDQNHPAALIN--YAALLLCKYGSVL----AGAGANTGEGACLDQASAVN 354
S + ++ D+++ + N + L+ KY L N + + ++
Sbjct: 95 SISVLEQAVISDESNVQSFYNLGFTFKLMGKYDDALNCFNRVVEENPEDVLAFNHIGSIY 154
Query: 355 VAKE-------CLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM-- 405
K L LK DP + NLA +Y G+ + E A K +P +
Sbjct: 155 ALKNQNKDAVSSYLRGLKIDPNHPILHLNLAKSYDALGEFEKAQAEYEAALKTKPGWLEA 214
Query: 406 ------------STRYAVAVSR------IKDAERSQE----PTEQLSWAGNEMASILREG 443
TR A + R KDA + T+Q + E+ E
Sbjct: 215 IENYADLLLKKNKTRNAGELVRHALNLNPKDAAMHTKLGDVYTKQSDFDNAEVE--YNEA 272
Query: 444 DPVQIEPPIAWAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAF------LDQAS 497
++ E P A +G A+ ++ A E + +ME + S L A
Sbjct: 273 LKIRPEFPKALSGLASAYESTGRNEDALEI----MGRMENASPEDSSMLCQYAHILLSAD 328
Query: 498 AVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKV 543
+ A + + A + +P H+ L Y GD R + C +K+
Sbjct: 329 RIEEAGKKIQCAYEKNPDDLHVLNLLGQYYICIGDERKASGCFKKI 374
>gi|356535232|ref|XP_003536152.1| PREDICTED: probable UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase SEC-like [Glycine max]
Length = 988
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 108/264 (40%), Gaps = 38/264 (14%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 213
P A+ LG +Y+ LG P +A++ Y+ A + R +A L S+
Sbjct: 265 PSFPDAYLNLGNVYKALGMPQEAIACYQHALQT--RPNYGMAYGNLASIY---------- 312
Query: 214 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 273
E +L+ + K+++ D R +N LG L GR++ +I +
Sbjct: 313 -----------YEQGQLDMAILHYKQAVACDPRFLEAYNNLGNALKDVGRVEEAIQCYNQ 361
Query: 274 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLI-----LKDQNHPAALI-----NYA 323
L + PN+ + NLG Y + + +A+ ++ + L + A+I NY
Sbjct: 362 CLTLQPNHPQALTNLGNIYMEWNMVAAAAQYYKATLNVTTGLSAPYNNLAIIYKQQGNYV 421
Query: 324 ALLLCKYGSVLA----GAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLAN 379
+ C Y VL A G + V+ A + + A+ P A ANLA+
Sbjct: 422 DAISC-YNEVLRIDPLAADGLVNRGNTYKEIGRVSDAIQDYIRAIVVRPTMAEAHANLAS 480
Query: 380 AYYLTGDHRSSGKCLEKAAKLEPN 403
AY +G ++ K ++A L P+
Sbjct: 481 AYKDSGHVEAAVKSYKQALILRPD 504
Score = 45.4 bits (106), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 74/175 (42%), Gaps = 21/175 (12%)
Query: 228 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 287
+ + ++K +E+++ + A + + + G + +I + + PN D N
Sbjct: 112 HDFDMCVAKNEEALRIEPHFAECYGNMANAWKEKGNIDLAIRYYLIAIELRPNFADAWSN 171
Query: 288 LGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL 347
L AY + G + ++A+C + A IN ++ A +N G +
Sbjct: 172 LASAYMRKGRLTEAAQCCRQ---------ALAIN----------PLMVDAHSNLGN--LM 210
Query: 348 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 402
V A C L AL+ P A W+NLA + +GD + + ++A KL+P
Sbjct: 211 KAQGLVQEAYSCYLEALRIQPTFAIAWSNLAGLFMESGDFNRALQYYKEAVKLKP 265
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 70/174 (40%), Gaps = 21/174 (12%)
Query: 230 LEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLG 289
++E S E+++ A+ W+ L + ++SG ++ + + P+ D NLG
Sbjct: 216 VQEAYSCYLEALRIQPTFAIAWSNLAGLFMESGDFNRALQYYKEAVKLKPSFPDAYLNLG 275
Query: 290 IAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQ 349
Y G +++ C+Q + N+ A N A++ E LD
Sbjct: 276 NVYKALGMPQEAIACYQHALQTRPNYGMAYGNLASIYY---------------EQGQLDM 320
Query: 350 ASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 403
A+ K+ A+ DP+ + NL NA G + +C + L+PN
Sbjct: 321 --AILHYKQ----AVACDPRFLEAYNNLGNALKDVGRVEEAIQCYNQCLTLQPN 368
>gi|357441257|ref|XP_003590906.1| O-linked GlcNAc transferase like protein [Medicago truncatula]
gi|355479954|gb|AES61157.1| O-linked GlcNAc transferase like protein [Medicago truncatula]
Length = 744
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 108/262 (41%), Gaps = 38/262 (14%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 213
P A+ LG +Y+ LG P +A++ Y+ A + R +A L S IH+ Q
Sbjct: 21 PSFPDAYLNLGNVYKALGMPQEAIACYQHALQT--RPNYGMAYGNLAS---IHYEQ---- 71
Query: 214 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 273
+L+ + K+++ D R +N LG L GR++ +I +
Sbjct: 72 --------------GQLDMAILHYKQAIACDPRFLEAYNNLGNALKDVGRVEEAIQCYNQ 117
Query: 274 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLI-----LKDQNHPAALI-----NYA 323
L++ PN+ + NLG Y + + +A ++ + L + A+I NYA
Sbjct: 118 CLSLQPNHPQALTNLGNIYMEWNMVAAAASYYKATLNVTTGLSAPYNNLAIIYKQQGNYA 177
Query: 324 ALLLCKYGSVLA----GAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLAN 379
+ C Y VL A G + V+ A + + A+ P A ANLA+
Sbjct: 178 DAISC-YNEVLRIDPLAADGLVNRGNTYKEIGRVSDAIQDYIRAITVRPTMAEAHANLAS 236
Query: 380 AYYLTGDHRSSGKCLEKAAKLE 401
AY +G ++ K +A L
Sbjct: 237 AYKDSGHVEAAVKSYRQALILR 258
Score = 45.4 bits (106), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 83/203 (40%), Gaps = 16/203 (7%)
Query: 231 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 290
+E ++ + ++Q+ + + L I + G+L +I +A DP + NLG
Sbjct: 41 QEAIACYQHALQTRPNYGMAYGNLASIHYEQGQLDMAILHYKQAIACDPRFLEAYNNLGN 100
Query: 291 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGA-------GANTGE 343
A G +E++ +C+ + NHP AL N + + ++ V A A TG
Sbjct: 101 ALKDVGRVEEAIQCYNQCLSLQPNHPQALTNLGNIYM-EWNMVAAAASYYKATLNVTTGL 159
Query: 344 GACLDQASAV-----NVAK--ECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEK 396
A + + + N A C L+ DP AA N N Y G + + +
Sbjct: 160 SAPYNNLAIIYKQQGNYADAISCYNEVLRIDPLAADGLVNRGNTYKEIGRVSDAIQDYIR 219
Query: 397 AAKLEPNCMSTRYAVAVSRIKDA 419
A + P M+ +A S KD+
Sbjct: 220 AITVRPT-MAEAHANLASAYKDS 241
>gi|344345623|ref|ZP_08776459.1| hypothetical protein MarpuDRAFT_3273 [Marichromatium purpuratum
984]
gi|343802795|gb|EGV20725.1| hypothetical protein MarpuDRAFT_3273 [Marichromatium purpuratum
984]
Length = 425
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 73/184 (39%), Gaps = 21/184 (11%)
Query: 225 LEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDC 284
+E LEE LSK + + R +W +G +L +S +S++ + LA++P + +
Sbjct: 152 VEDNRLEEALSKARLLCKKYPRDFFLWKAMGTVLYRSDDCRSALPAMQQALALNPKDPEL 211
Query: 285 IGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEG 344
+ LG G + QS CF I ++ A A+ G
Sbjct: 212 LNTLGNILHDLGRLAQSQSCFSRAIALSPDY---------------------AEAHNSLG 250
Query: 345 ACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNC 404
A L + A AL P + ++N+ Y TG+ + + E A +P+
Sbjct: 251 AVLKSLGRFDEAIASYRRALALKPDLSEAYSNIGIVYKDTGELDKARRYYEMALDKDPDN 310
Query: 405 MSTR 408
++ R
Sbjct: 311 LNAR 314
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 41/75 (54%)
Query: 252 NTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILK 311
N+LG +L GR +I+ LA+ P+ + N+GI Y +G+++++ + ++ + K
Sbjct: 247 NSLGAVLKSLGRFDEAIASYRRALALKPDLSEAYSNIGIVYKDTGELDKARRYYEMALDK 306
Query: 312 DQNHPAALINYAALL 326
D ++ A N +L
Sbjct: 307 DPDNLNARNNLGGVL 321
>gi|189500702|ref|YP_001960172.1| hypothetical protein Cphamn1_1773 [Chlorobium phaeobacteroides BS1]
gi|189496143|gb|ACE04691.1| Tetratricopeptide TPR_2 repeat protein [Chlorobium phaeobacteroides
BS1]
Length = 466
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 78/196 (39%), Gaps = 23/196 (11%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
E + L KL + T + ++ GLIL K R + S L LA++P+ + L
Sbjct: 118 EYKTALDKLDSILCDSTLEKEMYFYRGLILQKMERYRESEKYLEKCLALEPDFAEAWYEL 177
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLD 348
G ME+SA C+Q I +D + A N +G L
Sbjct: 178 AFCKDVLGKMEESATCYQKTIDQDPYNVNAWYN---------------------KGLVLS 216
Query: 349 QASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTR 408
+ + A EC A+ + W N AN +TG + + K + EP+ ++
Sbjct: 217 KLKKYDDALECYDMAIAIADDFSSAWYNRANVLAITGKIEEAAESYLKTIEFEPDDINAL 276
Query: 409 Y--AVAVSRIKDAERS 422
Y +A ++D +++
Sbjct: 277 YNLGIAFEELEDYDKA 292
>gi|17231874|ref|NP_488422.1| hypothetical protein all4382 [Nostoc sp. PCC 7120]
gi|17133518|dbj|BAB76081.1| all4382 [Nostoc sp. PCC 7120]
Length = 311
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 70/166 (42%), Gaps = 21/166 (12%)
Query: 255 GLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQN 314
GL +++GRLQ +I+ S + +DPN NLG+A Q+G ++ +A F D N
Sbjct: 52 GLQAIQAGRLQDAIAAFQSAIQLDPNLAAAHYNLGLALRQTGQLQPAADAFYRATQSDPN 111
Query: 315 HPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIW 374
A N GS+L EG L QA+ + L AL+ +P+
Sbjct: 112 FALAFANLG-------GSLL--------EGNNLQQAN------DYLQRALELEPRLGFAH 150
Query: 375 ANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAE 420
NL + + +KA +L N Y + +S ++ +
Sbjct: 151 YNLGLVRQQQQNWEGAIASFQKAVELSKNAPEPHYYLGISYLQQGK 196
>gi|357441255|ref|XP_003590905.1| O-linked GlcNAc transferase like protein [Medicago truncatula]
gi|355479953|gb|AES61156.1| O-linked GlcNAc transferase like protein [Medicago truncatula]
Length = 986
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 108/262 (41%), Gaps = 38/262 (14%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 213
P A+ LG +Y+ LG P +A++ Y+ A + R +A L S IH+ Q
Sbjct: 263 PSFPDAYLNLGNVYKALGMPQEAIACYQHALQT--RPNYGMAYGNLAS---IHYEQ---- 313
Query: 214 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 273
+L+ + K+++ D R +N LG L GR++ +I +
Sbjct: 314 --------------GQLDMAILHYKQAIACDPRFLEAYNNLGNALKDVGRVEEAIQCYNQ 359
Query: 274 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLI-----LKDQNHPAALI-----NYA 323
L++ PN+ + NLG Y + + +A ++ + L + A+I NYA
Sbjct: 360 CLSLQPNHPQALTNLGNIYMEWNMVAAAASYYKATLNVTTGLSAPYNNLAIIYKQQGNYA 419
Query: 324 ALLLCKYGSVLA----GAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLAN 379
+ C Y VL A G + V+ A + + A+ P A ANLA+
Sbjct: 420 DAISC-YNEVLRIDPLAADGLVNRGNTYKEIGRVSDAIQDYIRAITVRPTMAEAHANLAS 478
Query: 380 AYYLTGDHRSSGKCLEKAAKLE 401
AY +G ++ K +A L
Sbjct: 479 AYKDSGHVEAAVKSYRQALILR 500
Score = 45.4 bits (106), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 74/175 (42%), Gaps = 21/175 (12%)
Query: 228 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 287
+ + ++K +E+++ + A + + + G + +I + + PN D N
Sbjct: 110 HDFDMCVAKNEEALRIEPHFAECYGNMANAWKEKGNIDLAIRYYLIAIELRPNFADAWSN 169
Query: 288 LGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL 347
L AY + G + ++A+C + A IN ++ A +N G +
Sbjct: 170 LASAYMRKGRLTEAAQCCRQ---------ALAIN----------PLMVDAHSNLGN--LM 208
Query: 348 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 402
V A C L AL+ P A W+NLA + +GD + + ++A KL+P
Sbjct: 209 KAQGLVQEAYSCYLEALRIQPTFAIAWSNLAGLFMESGDFNRALQYYKEAVKLKP 263
Score = 45.4 bits (106), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 83/203 (40%), Gaps = 16/203 (7%)
Query: 231 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 290
+E ++ + ++Q+ + + L I + G+L +I +A DP + NLG
Sbjct: 283 QEAIACYQHALQTRPNYGMAYGNLASIHYEQGQLDMAILHYKQAIACDPRFLEAYNNLGN 342
Query: 291 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGA-------GANTGE 343
A G +E++ +C+ + NHP AL N + + ++ V A A TG
Sbjct: 343 ALKDVGRVEEAIQCYNQCLSLQPNHPQALTNLGNIYM-EWNMVAAAASYYKATLNVTTGL 401
Query: 344 GACLDQASAV-----NVAK--ECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEK 396
A + + + N A C L+ DP AA N N Y G + + +
Sbjct: 402 SAPYNNLAIIYKQQGNYADAISCYNEVLRIDPLAADGLVNRGNTYKEIGRVSDAIQDYIR 461
Query: 397 AAKLEPNCMSTRYAVAVSRIKDA 419
A + P M+ +A S KD+
Sbjct: 462 AITVRPT-MAEAHANLASAYKDS 483
Score = 39.7 bits (91), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 68/174 (39%), Gaps = 21/174 (12%)
Query: 230 LEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLG 289
++E S E+++ A+ W+ L + ++SG ++ + + P+ D NLG
Sbjct: 214 VQEAYSCYLEALRIQPTFAIAWSNLAGLFMESGDFNRALQYYKEAVKLKPSFPDAYLNLG 273
Query: 290 IAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQ 349
Y G +++ C+Q + Q P YG + E LD
Sbjct: 274 NVYKALGMPQEAIACYQHAL---QTRP------------NYGMAYGNLASIHYEQGQLDM 318
Query: 350 ASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 403
A+ K+ A+ DP+ + NL NA G + +C + L+PN
Sbjct: 319 --AILHYKQ----AIACDPRFLEAYNNLGNALKDVGRVEEAIQCYNQCLSLQPN 366
>gi|119510182|ref|ZP_01629320.1| hypothetical protein N9414_10368 [Nodularia spumigena CCY9414]
gi|119465132|gb|EAW46031.1| hypothetical protein N9414_10368 [Nodularia spumigena CCY9414]
Length = 304
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 68/176 (38%), Gaps = 21/176 (11%)
Query: 248 AVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQD 307
+ W GL +++GRLQ +I+ +DPN NLG+A Q+G ++ +A F
Sbjct: 43 STTWLNQGLQAIQAGRLQDAIAAFQQATQLDPNLATAHYNLGLALRQTGKLKPAADAFYQ 102
Query: 308 LILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKAD 367
D A N LL EG+ L QAS + L A++ D
Sbjct: 103 ATQADPQFAPAFANLGGALL---------------EGSNLQQAS------DYLERAIELD 141
Query: 368 PKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQ 423
PK NL D + +KA + N Y + S ++ + +Q
Sbjct: 142 PKLGFAHYNLGLVRQQQQDWERAIASFKKAMEYSKNAPEPPYHLGTSYLQQGKVNQ 197
Score = 41.6 bits (96), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 37/177 (20%), Positives = 66/177 (37%), Gaps = 21/177 (11%)
Query: 237 LKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSG 296
++ Q+D + A + LG LL+ LQ + L + +DP NLG+ Q
Sbjct: 100 FYQATQADPQFAPAFANLGGALLEGSNLQQASDYLERAIELDPKLGFAHYNLGLVRQQQQ 159
Query: 297 DMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVA 356
D E++ F+ + +N P + G Q VN A
Sbjct: 160 DWERAIASFKKAMEYSKNAPEPPYHL---------------------GTSYLQQGKVNQA 198
Query: 357 KECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAV 413
++ A+K +P+ NL ++ G + + K+A+ PN + Y +
Sbjct: 199 RDAFFQAIKNNPQYPEAHYNLGMIWFNQGQLKEALAAFRKSAEANPNYPNAYYGAGL 255
>gi|333980826|ref|YP_004518771.1| hypothetical protein Desku_3490 [Desulfotomaculum kuznetsovii DSM
6115]
gi|333824307|gb|AEG16970.1| Tetratricopeptide TPR_1 repeat-containing protein [Desulfotomaculum
kuznetsovii DSM 6115]
Length = 211
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 70/163 (42%), Gaps = 21/163 (12%)
Query: 241 MQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQ 300
+QS+ A LG++L++ GRL + ++ ++ + NLG YF+ G++E+
Sbjct: 18 LQSNPGCATAKYNLGVMLMEQGRLDEAKTLFEEAISDGTRMFEAYVNLGYIYFKQGNLEK 77
Query: 301 SAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECL 360
+C + + + P YA L G Q + A E L
Sbjct: 78 VEECNRKAV---EIEPRYARGYANL------------------GFAYLQMEKTDEAIEVL 116
Query: 361 LAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 403
A++ +P+ W NLANAY G+ + + +K ++ P+
Sbjct: 117 HKAIELNPRIVQAWCNLANAYLQKGELDRAIETNQKLLEMAPD 159
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 73/176 (41%), Gaps = 21/176 (11%)
Query: 225 LEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDC 284
+E L+E + +E++ TR + LG I K G L+ + ++P
Sbjct: 36 MEQGRLDEAKTLFEEAISDGTRMFEAYVNLGYIYFKQGNLEKVEECNRKAVEIEPRYARG 95
Query: 285 IGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEG 344
NLG AY Q ME++ + + L H A +N + + LA A GE
Sbjct: 96 YANLGFAYLQ---MEKTDEAIEVL------HKAIELNPR---IVQAWCNLANAYLQKGE- 142
Query: 345 ACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKL 400
LD+A N L + D H NLA AYYL GD + L++A +L
Sbjct: 143 --LDRAIETNQK----LLEMAPDFSLGH--NNLACAYYLKGDMIRAAGHLKRALEL 190
>gi|183221520|ref|YP_001839516.1| hypothetical protein LEPBI_I2138 [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
gi|189911604|ref|YP_001963159.1| hypothetical protein LBF_2084 [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167776280|gb|ABZ94581.1| Conserved hypothetical protein containing tetratricopeptide repeat
(TPR) domains [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Ames)']
gi|167779942|gb|ABZ98240.1| Putative TPR-repeat-containing protein [Leptospira biflexa serovar
Patoc strain 'Patoc 1 (Paris)']
Length = 700
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 87/208 (41%), Gaps = 27/208 (12%)
Query: 128 LGTSSSSREEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEIL 187
LGT RE+ + V R +A A++ LGL+Y + P +A ++KA
Sbjct: 292 LGTIFYQRED-YDRAEYYFREVIRLKTGDAKAYYNLGLVYLKKKVPEEAAKYFQKA---- 346
Query: 188 LRCEADIARPE--------LLSLVQIHHA-----QCLLPESSGDNSL-------DKELEP 227
+A+ PE LS+ Q + A + LL + S +SL K+ E
Sbjct: 347 --LDANANEPEVYRYIADAFLSMGQTNMAITALKKALLLKPSDVDSLFALAELYYKKGEL 404
Query: 228 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 287
E E + ++ DT + LG+IL + R SI+ L+++P N N
Sbjct: 405 VEAESLFRRIIRLTPGDTYSETAYVNLGIILDEMERYSESIAAFEGALSLNPKNQSAYYN 464
Query: 288 LGIAYFQSGDMEQSAKCFQDLILKDQNH 315
LG++Y +G + + + D NH
Sbjct: 465 LGLSYLHAGKPTMAIESLRKSQALDPNH 492
Score = 43.9 bits (102), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 40/204 (19%), Positives = 83/204 (40%), Gaps = 21/204 (10%)
Query: 231 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 290
EE ++++ ++ + V+ + L G+ +I+ L L + P++ D + L
Sbjct: 337 EEAAKYFQKALDANANEPEVYRYIADAFLSMGQTNMAITALKKALLLKPSDVDSLFALAE 396
Query: 291 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQA 350
Y++ G++ ++ F+ +I + Y L G LD+
Sbjct: 397 LYYKKGELVEAESLFRRIIRLTPGDTYSETAYVNL------------------GIILDEM 438
Query: 351 SAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYA 410
+ + AL +PK + NL +Y G + + L K+ L+PN + +R A
Sbjct: 439 ERYSESIAAFEGALSLNPKNQSAYYNLGLSYLHAGKPTMAIESLRKSQALDPNHVPSRLA 498
Query: 411 VAVSRIKDA---ERSQEPTEQLSW 431
+A +++ E E E ++W
Sbjct: 499 IADYYLENRFYNEAISEYEEAIAW 522
>gi|430746859|ref|YP_007205988.1| O-linked N-acetylglucosamine transferase, SPINDLY family
[Singulisphaera acidiphila DSM 18658]
gi|430018579|gb|AGA30293.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Singulisphaera acidiphila DSM 18658]
Length = 873
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 2/94 (2%)
Query: 222 DKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNN 281
D P E+L ++++ +D A W LGLI ++G + + L + P N
Sbjct: 25 DHRAGPFHQAELL--YRQALVADPNNAETWQLLGLIAHQAGYHDKGAAHIHQALLLSPGN 82
Query: 282 CDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNH 315
+ +LG Y + GD EQ+ CFQ++I + H
Sbjct: 83 AAYLNSLGSIYQEKGDYEQAIPCFQEVIRLEPTH 116
>gi|293651727|pdb|2WQH|A Chain A, Crystal Structure Of Ctpr3y3
Length = 125
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 59/134 (44%), Gaps = 22/134 (16%)
Query: 276 AVDP-NNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVL 334
A+DP N+ + NLG AY++ GD +++ + +Q + N+ A N L
Sbjct: 2 AMDPGNSAEAWYNLGNAYYKQGDYDEAIEYYQKALELYPNNAEAWYN------------L 49
Query: 335 AGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCL 394
A G+ + A E AL+ P A W NL NAYY GD+ + +
Sbjct: 50 GNAYYKQGD---------YDEAIEYYQKALELYPNNAEAWYNLGNAYYKQGDYDEAIEYY 100
Query: 395 EKAAKLEPNCMSTR 408
+KA +L PN +
Sbjct: 101 QKALELYPNNAEAK 114
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 38/78 (48%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
+ +E + +++++ A W LG K G +I L + PNN + NL
Sbjct: 24 DYDEAIEYYQKALELYPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELYPNNAEAWYNL 83
Query: 289 GIAYFQSGDMEQSAKCFQ 306
G AY++ GD +++ + +Q
Sbjct: 84 GNAYYKQGDYDEAIEYYQ 101
Score = 45.8 bits (107), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 29/59 (49%)
Query: 248 AVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQ 306
A W LG K G +I L + PNN + NLG AY++ GD +++ + +Q
Sbjct: 9 AEAWYNLGNAYYKQGDYDEAIEYYQKALELYPNNAEAWYNLGNAYYKQGDYDEAIEYYQ 67
>gi|226944845|ref|YP_002799918.1| glycosyl transferase family protein [Azotobacter vinelandii DJ]
gi|226719772|gb|ACO78943.1| glycosyl transferase,TPR repeat protein [Azotobacter vinelandii DJ]
Length = 1221
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%)
Query: 249 VVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQS 301
+ W GL LL+S R Q +I VL +DP + D + NLGIAY + G+++++
Sbjct: 28 LAWKVWGLALLESRRPQQAIEVLHRADGIDPEDPDTLHNLGIAYLKQGNIQKA 80
>gi|116071463|ref|ZP_01468731.1| TPR repeat [Synechococcus sp. BL107]
gi|116065086|gb|EAU70844.1| TPR repeat [Synechococcus sp. BL107]
Length = 400
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 43/85 (50%)
Query: 225 LEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDC 284
+E +L+E + + + Q A+ W LGL+L K G + +++ LA+DPNN C
Sbjct: 285 MEQNQLDEAIQLTQTATQRAPEVALGWYNLGLMLRKKGEIAAALESYGRSLALDPNNAAC 344
Query: 285 IGNLGIAYFQSGDMEQSAKCFQDLI 309
N +A GD+E + F+ I
Sbjct: 345 HQNHAVARLLGGDIEAARNGFRTAI 369
>gi|22165103|gb|AAM93720.1| putative stress inducible protein [Oryza sativa Japonica Group]
Length = 380
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 63/135 (46%)
Query: 184 EEILLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQS 243
++L+R E D++ EL V+ A G L ++ P ++ + +++ +
Sbjct: 222 RQVLVRRELDLSAKELQEQVRSGDASATEYFELGAVMLRRKFYPAAIKYLQQAIQKWDRD 281
Query: 244 DTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAK 303
+ A V+N LG+ + +L SI + + P NLG AY Q D++ + K
Sbjct: 282 EQDLAQVYNALGVSYKRDNKLDKSIQQFEKAVELQPGYVTAWNNLGDAYEQKKDLKSALK 341
Query: 304 CFQDLILKDQNHPAA 318
F++++L D N+ A
Sbjct: 342 AFEEVLLFDPNNTVA 356
>gi|78708787|gb|ABB47762.1| tetratricopeptide repeat, putative, expressed [Oryza sativa
Japonica Group]
Length = 381
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 63/135 (46%)
Query: 184 EEILLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQS 243
++L+R E D++ EL V+ A G L ++ P ++ + +++ +
Sbjct: 223 RQVLVRRELDLSAKELQEQVRSGDASATEYFELGAVMLRRKFYPAAIKYLQQAIQKWDRD 282
Query: 244 DTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAK 303
+ A V+N LG+ + +L SI + + P NLG AY Q D++ + K
Sbjct: 283 EQDLAQVYNALGVSYKRDNKLDKSIQQFEKAVELQPGYVTAWNNLGDAYEQKKDLKSALK 342
Query: 304 CFQDLILKDQNHPAA 318
F++++L D N+ A
Sbjct: 343 AFEEVLLFDPNNTVA 357
>gi|451982186|ref|ZP_21930513.1| exported hypothetical protein, contains TPR repeats [Nitrospina
gracilis 3/211]
gi|451760606|emb|CCQ91795.1| exported hypothetical protein, contains TPR repeats [Nitrospina
gracilis 3/211]
Length = 755
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 74/172 (43%), Gaps = 23/172 (13%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 213
P+N + LG++Y +GQP KA+ +Y +A +R ++D P +L ++ P
Sbjct: 594 PENYRIYNQLGVIYSEIGQPDKAIHAYSEA----IRLKSDYFEPRF-NLGVLYDLLGRYP 648
Query: 214 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 273
++ L+ L +++ D + G +LL+ R + ++
Sbjct: 649 DA------------------LTSLDGALRVDAENPSAHFSRGWVLLQLKRYREAVWAFQQ 690
Query: 274 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAAL 325
DP+N D NLG+A+ + ++ F+ + D +H AL A L
Sbjct: 691 AARYDPSNADAHFNLGVAFAAAHRRGEARSAFRMALRIDPDHTGALTRLAEL 742
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 102/490 (20%), Positives = 183/490 (37%), Gaps = 125/490 (25%)
Query: 76 HDKGSILMSKEMDVAEVEGKKINKLGKCRSRISSKMDSALEF--GVDADGD----QSGLG 129
+DK K ++V + ++G+ S++ ++A F V D + Q GLG
Sbjct: 69 YDKAIAEFKKVLEVEPLYSGAYYQIGEAHSQLGHTKEAAEAFREAVLLDPNFADAQFGLG 128
Query: 130 TSS---SSREEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEI 186
++ EE + L L R P AHF LG Y + +A+ Y A
Sbjct: 129 YANLELKKYEEALEHLTNSL----RINPGMPRAHFALGRTYAETDRHTEAIPEYLIA--- 181
Query: 187 LLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEP-EELEEILSKLKESMQSDT 245
L L +H PE +L K +E + + +S+ K+++ ++
Sbjct: 182 -------------LELSPLH------PEWRF--ALAKSMEALSQFDSAISQYKQTLDLNS 220
Query: 246 RQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCF 305
A + +G I + +G+L+ ++ L + L +DP N + LG A + G ++ F
Sbjct: 221 NFADAYAAIGRIRVATGQLKKALEPLENALRIDPQNALALEYLGRALSRMGKHREAMLAF 280
Query: 306 QDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALK 365
++L A + G L+ VN A+E AL+
Sbjct: 281 KELTFVQPQQ-------------------AKSHYQLGR-EYLELGQLVN-ARESFENALR 319
Query: 366 ADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNC--------MSTRYAVAVSRIK 417
D NL ++L G+ LE ++E ++ ++ A RI
Sbjct: 320 FDSN------NLDIRFHL-------GQTLENLGQMEKAIVEYMRVLNLNPKHVRAHHRIA 366
Query: 418 DAERSQEPTEQLSWAGNEMASILR---EGDPVQIEPPIAWAGFAAVQKTHHEVAAAFETE 474
D QE + A E ++LR E PVQ+ ++A A+E
Sbjct: 367 DLSLLQENYHR---AAEEFENVLRLDPENGPVQL-----------------KLARAYE-- 404
Query: 475 ENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHR 534
EL++ ++ A + +L+ P + IW +L N + G++R
Sbjct: 405 --ELNRWQDAISAYQK------------------SLRFFPDSVEIWQSLGNTQWQLGNYR 444
Query: 535 SSGKCLEKVL 544
++ L + L
Sbjct: 445 AAIVPLRETL 454
Score = 39.3 bits (90), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 102/267 (38%), Gaps = 44/267 (16%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIAR-PELLSLVQIHHAQCLL 212
P+ A F LG++ RLG + E+ ++ E +AR P+ AQ +L
Sbjct: 492 PELPQADFGLGIILTRLG----------RHEQAVIHLERTVARNPDNFQ------AQAML 535
Query: 213 PESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLS 272
+S LE E E + L+ +M TR+ LG + Q ++
Sbjct: 536 GDSY--------LELERYAEAVPALRAAMGDVTRRQQTLLKLGSAYWHLRQYQMALKAYH 587
Query: 273 SLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAAL--LLCKY 330
+ +DP N LG+ Y + G +++ + + I ++ N L LL +Y
Sbjct: 588 QSVQLDPENYRIYNQLGVIYSEIGQPDKAIHAYSEAIRLKSDYFEPRFNLGVLYDLLGRY 647
Query: 331 GSVLA---GA--------GANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLAN 379
L GA A+ G L Q A A + DP A NL
Sbjct: 648 PDALTSLDGALRVDAENPSAHFSRGWVLLQLKRYREAVWAFQQAARYDPSNADAHFNLGV 707
Query: 380 AY---YLTGDHRSSGKCLEKAAKLEPN 403
A+ + G+ RS+ + A +++P+
Sbjct: 708 AFAAAHRRGEARSAFRM---ALRIDPD 731
>gi|20092504|ref|NP_618579.1| hypothetical protein MA3704 [Methanosarcina acetivorans C2A]
gi|19917772|gb|AAM07059.1| TPR-domain containing protein [Methanosarcina acetivorans C2A]
Length = 1004
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 74/188 (39%), Gaps = 15/188 (7%)
Query: 230 LEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLG 289
E+ L ++ + + + W G IL R + ++ LA DP+N G
Sbjct: 13 FEKALEAFDALLEINPQDTIAWQYKGNILRYLDRPEEALEAFEKALAFDPDNVSARYFKG 72
Query: 290 IAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYG------SVLAGA------ 337
+ E++ + F+ ++ KD H AL Y+ L L + G S L+GA
Sbjct: 73 LTLGYLNLPERALEAFERVLEKDPEHSGALY-YSGLALNQLGKHTEAASALSGALEINPE 131
Query: 338 --GANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLE 395
GA G L A + L +P A W A AY G R + K E
Sbjct: 132 NPGAWYYRGESLYILGKSAEALKAFEETLALEPSHAGAWEGKAKAYLSLGRKREALKASE 191
Query: 396 KAAKLEPN 403
KA KL+P+
Sbjct: 192 KALKLKPS 199
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 66/161 (40%), Gaps = 17/161 (10%)
Query: 171 GQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEEL 230
G+ L ++ YE+A E E+ + LS +I + LL + +LD
Sbjct: 242 GKLLGSLGRYEEALEAF---ESSLWMDSSLSEAKIKRGKTLLALGNFQQALDS------- 291
Query: 231 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 290
+++++ D W G L G+ ++ L+++P N + +G
Sbjct: 292 ------FRKNLEEDPENFENWGGTGSCFLAFGKYYEAMKAYEKALSIEPENSCIMSGIGE 345
Query: 291 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYG 331
Y+Q GD ++ + F+ + D + A N +LCK G
Sbjct: 346 IYYQLGDYSRALEAFEQALRLDIENGFAW-NGKGNVLCKLG 385
>gi|293607393|ref|ZP_06689732.1| conserved hypothetical protein [Achromobacter piechaudii ATCC
43553]
gi|292814237|gb|EFF73379.1| conserved hypothetical protein [Achromobacter piechaudii ATCC
43553]
Length = 623
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 53/98 (54%)
Query: 230 LEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLG 289
L+E + ++ D +QA WN LG+IL + G+L++S+ L + A+ P++ NLG
Sbjct: 98 LDEAQEAARRAVALDPQQAEGWNNLGIILQEQGQLEASLQCLRRVAALLPDSPQAHNNLG 157
Query: 290 IAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLL 327
Q GD Q+ + ++ + D ++ AL+N + L
Sbjct: 158 NTCKQLGDNAQALEHYRRALALDPDYAQALVNLSVALF 195
>gi|402076639|gb|EJT72062.1| RCM-1 [Gaeumannomyces graminis var. tritici R3-111a-1]
Length = 895
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 53/252 (21%), Positives = 92/252 (36%), Gaps = 44/252 (17%)
Query: 196 RPELLSLVQIHHAQ-CLLPESSGDNSLDKELEPEE---------------LEEILSKLKE 239
RP VQ+HH +P S N + P L E+L L+E
Sbjct: 5 RPSPPMSVQMHHGPGAPIPPGSVPNGGPSFISPSRRMAEATEGVWMQIGSLSELLGNLEE 64
Query: 240 SMQSDTRQAVV-------WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAY 292
+M + R + N + LIL Q + L+++L +DP N + G+LG Y
Sbjct: 65 AMNAYERALTINPQSIPAMNAMSLILRTKEEFQKACEFLNAILKLDPQNGEAWGSLGHCY 124
Query: 293 FQSGDMEQSAKCFQDLILKDQNHPAALINYA-ALLLCKYGSVLAGAGANTGE-------- 343
D++Q+ +Q+ ++ + Y +L +YGS+ A +
Sbjct: 125 LMIDDLQQAYSAYQNALMNLPKPRDPKLWYGIGILYDRYGSLDHAEEAFSSVMQMQPDFE 184
Query: 344 ---------GACLDQASAVNVAKECLLAALKADP---KAAHIWANLANAYYLTGDHRSSG 391
G Q S N + EC + + P IW + + + D+ ++
Sbjct: 185 KANEIYFRLGIIYKQQSKFNQSLECFKYIVHSPPLPLTEEDIWFQIGHVHEQQKDYDNAK 244
Query: 392 KCLEKAAKLEPN 403
+ + EPN
Sbjct: 245 AAYLRVLEREPN 256
>gi|345869212|ref|ZP_08821172.1| tetratricopeptide repeat family protein [Bizionia argentinensis
JUB59]
gi|344046374|gb|EGV42038.1| tetratricopeptide repeat family protein [Bizionia argentinensis
JUB59]
Length = 415
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 60/128 (46%), Gaps = 8/128 (6%)
Query: 262 GRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALIN 321
G L ++ + +DPNN D NLG+ ++ D +++ + +Q +I D + A N
Sbjct: 266 GNLDEYRVLIEKAIELDPNNIDLFYNLGVLASEAKDNDKAKEYYQKVIDMDPTYINAQTN 325
Query: 322 YAALLLCKYGSVLA---GAGANTGEGACLDQ--ASAVNVAKEC---LLAALKADPKAAHI 373
AAL+L + S++ G G ++ + D+ N+ K L A L+ DP + +
Sbjct: 326 LAALILGEEASLIEEMNGLGTSSADNKRYDELKKERTNIYKTAIPYLEAVLEIDPNSIEV 385
Query: 374 WANLANAY 381
L N Y
Sbjct: 386 TTTLMNIY 393
>gi|405362768|ref|ZP_11025821.1| hypothetical protein A176_1960 [Chondromyces apiculatus DSM 436]
gi|397090228|gb|EJJ21102.1| hypothetical protein A176_1960 [Myxococcus sp. (contaminant ex DSM
436)]
Length = 624
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 114/264 (43%), Gaps = 38/264 (14%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKA-EEILLRCEADIARPELLSLVQIHHAQCLL 212
P + GL+++R+ + A ++E +E + +A + R LSLV H L
Sbjct: 323 PGEPRLAYYAGLVHERMRRFSDAAVAFEGVPQESDVFADARVRRARSLSLVGEHSRAITL 382
Query: 213 --------PE-----SSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILL 259
PE + +L++ P E +L +E++ + A +++ L +L
Sbjct: 383 YRAAIQDAPEDVDLRAQFARALERGGTPGRAEALL---REALDAGP-SAALYDALAAMLH 438
Query: 260 KSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAAL 319
+ GR ++ +L +A P + D + LG A+ + GD+ + + ++ +H AAL
Sbjct: 439 RQGRGDEALRLLGDAVARFPRDEDLLYVLGAAHERQGDVPGALARMRAVLAVSPDHAAAL 498
Query: 320 INYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLAN 379
N+ G +LA AG N E A+ + AL+ P+ +L
Sbjct: 499 -NF-------LGYLLAQAGQNLDE------------AERRVRRALELRPETGAYLDSLGW 538
Query: 380 AYYLTGDHRSSGKCLEKAAKLEPN 403
Y+ GD+ + LE+A+ L P+
Sbjct: 539 VYFRRGDYTRAVDALERASSLSPD 562
>gi|422303532|ref|ZP_16390883.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9806]
gi|389791492|emb|CCI12702.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9806]
Length = 403
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Query: 226 EPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCI 285
E E E LS +++++ D+R A + LGL+ + RL SI L ++P+N
Sbjct: 289 EAENYETALSIFEKTVEIDSRYADGYYNLGLVFKQLHRLPESIKAYKKALKLNPDNPAIY 348
Query: 286 GNLGIAYFQSGDMEQSAKCFQD--LILKDQ 313
NLG+AY G ++ + +Q +LKDQ
Sbjct: 349 QNLGVAYIAFGSYNEAIEIWQKGLKLLKDQ 378
>gi|390440286|ref|ZP_10228629.1| Similar to tr|Q4BXF8|Q4BXF8_CROWT Glycosyl transferase [Microcystis
sp. T1-4]
gi|389836296|emb|CCI32755.1| Similar to tr|Q4BXF8|Q4BXF8_CROWT Glycosyl transferase [Microcystis
sp. T1-4]
Length = 403
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Query: 226 EPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCI 285
E E E LS +++++ D A + LGL+L + RL SI L ++P+N
Sbjct: 289 EAENYEAALSVFEKTVEIDPSYADGYYNLGLVLKQLHRLPESIKAYKKALKLNPDNPAIY 348
Query: 286 GNLGIAYFQSGDMEQSAKCFQD--LILKDQ 313
NLG+AY G+ ++ K +Q +LKDQ
Sbjct: 349 QNLGVAYITFGNYNEAIKIWQKGLQLLKDQ 378
>gi|333987462|ref|YP_004520069.1| hypothetical protein MSWAN_1251 [Methanobacterium sp. SWAN-1]
gi|333825606|gb|AEG18268.1| Tetratricopeptide TPR_2 repeat-containing protein [Methanobacterium
sp. SWAN-1]
Length = 1161
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 107/286 (37%), Gaps = 39/286 (13%)
Query: 156 NAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPEL-LSLVQIHHAQCLLPE 214
NA A F G++++ LG+ +A+ YEKA EI P+L LS +I +L +
Sbjct: 264 NAEAWFNKGVIFETLGKYDEAIEYYEKALEI---------APDLALSYHRISEILRILGK 314
Query: 215 SSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSL 274
EE + +S+ D++ A W + GL L GR + SI+
Sbjct: 315 ---------------YEEAIKYQDKSIALDSKNAEFWFSKGLSLSDLGRFEESINPFDKA 359
Query: 275 LAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALIN----------YAA 324
L ++PN D + E + C I + N P N Y
Sbjct: 360 LNINPNFSDAYSAKCASLRNLRKNEDALNCINTAIEFNPNSPELWFNKGLSLIDLKRYEE 419
Query: 325 LLLCKYGSVLAG---AGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAY 381
+ C +V A A +G L+ N A +C AL D + N ++
Sbjct: 420 SIRCFNEAVTLNHKFALAYNSKGFSLNHLDKFNEAIKCFNRALNIDSTLETAFNNKGISH 479
Query: 382 YLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQEPTE 427
G + + +C +A ++ P + Y S + + E E E
Sbjct: 480 LALGQYEKALECFNEALRINP-YFTEVYVNKGSALGNMEEYNEEIE 524
Score = 38.9 bits (89), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 35/179 (19%), Positives = 69/179 (38%), Gaps = 21/179 (11%)
Query: 225 LEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDC 284
++ + EE + E++ + + A+ +N+ G L + +I + L +D
Sbjct: 412 IDLKRYEESIRCFNEAVTLNHKFALAYNSKGFSLNHLDKFNEAIKCFNRALNIDSTLETA 471
Query: 285 IGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEG 344
N GI++ G E++ +CF + AL + Y + + +G
Sbjct: 472 FNNKGISHLALGQYEKALECFNE----------------ALRINPYFTEVY-----VNKG 510
Query: 345 ACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 403
+ L N EC AL+ + W N +A G + S C ++ ++ PN
Sbjct: 511 SALGNMEEYNEEIECYDKALELNQYIFEAWYNKGSALSNLGKYNESINCFNQSIEINPN 569
>gi|428305223|ref|YP_007142048.1| hypothetical protein Cri9333_1649 [Crinalium epipsammum PCC 9333]
gi|428246758|gb|AFZ12538.1| Tetratricopeptide TPR_1 repeat-containing protein [Crinalium
epipsammum PCC 9333]
Length = 832
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 68/172 (39%), Gaps = 21/172 (12%)
Query: 231 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 290
+E L ++++ Q VWN G++L+ GR Q +I+ L V P+ + N GI
Sbjct: 647 QEALIAFDQTLKVKPDQYEVWNNKGIVLVNLGRYQEAITAFDQTLKVKPDQYEVWNNKGI 706
Query: 291 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQA 350
A + G +++ F D LK + + N + L G A DQ
Sbjct: 707 ALGKLGRYQEALAAF-DQTLKVKPDQYEVWNNKGIALVNLGRYQEAITA-------FDQ- 757
Query: 351 SAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 402
LK P I+ N A Y L G+ + L++A L+P
Sbjct: 758 ------------TLKVKPDDDKIFYNKACCYALQGNVEQAINNLQQAINLDP 797
Score = 39.3 bits (90), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 38/193 (19%), Positives = 69/193 (35%), Gaps = 15/193 (7%)
Query: 231 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 290
+E L+ ++++ Q VW G++L+ G Q ++ L V PN+ + N GI
Sbjct: 579 QEALAAFDQALKVKPDQHQVWKNKGIVLVNLGCYQEALVAFDQALKVKPNDHEPWSNKGI 638
Query: 291 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGAN---------- 340
G +++ F D LK + + N ++L G A
Sbjct: 639 VLVNLGRYQEALIAF-DQTLKVKPDQYEVWNNKGIVLVNLGRYQEAITAFDQTLKVKPDQ 697
Query: 341 ----TGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEK 396
+G L + A LK P +W N A G ++ + ++
Sbjct: 698 YEVWNNKGIALGKLGRYQEALAAFDQTLKVKPDQYEVWNNKGIALVNLGRYQEAITAFDQ 757
Query: 397 AAKLEPNCMSTRY 409
K++P+ Y
Sbjct: 758 TLKVKPDDDKIFY 770
>gi|73671072|ref|YP_307087.1| TPR domain-containing protein [Methanosarcina barkeri str. Fusaro]
gi|72398234|gb|AAZ72507.1| TPR-domain containing protein [Methanosarcina barkeri str. Fusaro]
Length = 1979
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 92/236 (38%), Gaps = 17/236 (7%)
Query: 230 LEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLG 289
+EE L L +S++ + +W GLILL +G+ + ++ L + + P+N C N G
Sbjct: 429 IEEALDSLAQSLEKEPENYGLWLQQGLILLDNGKFEPALKALEKVAELKPDNDACWMNKG 488
Query: 290 IAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAG------------- 336
A + E++ + F++ L+ + N ++L K G
Sbjct: 489 YALYSMDRYEEALEDFEE-GLRLNPYLEKGWNNKGIVLGKLGRTEEALEAFEKAVSLRPD 547
Query: 337 -AGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLE 395
A G L A E LK +P+ N A G ++ +C E
Sbjct: 548 FEDAWKNRGLILLAVDDYEKASEAFDEVLKTNPEDLDSIYNRGTALLKLGKTETALECFE 607
Query: 396 KAAKLEPNCMSTRYAVAVSRIK--DAERSQEPTEQLSWAGNEMASILREGDPVQIE 449
K L P+ Y++AV++ K E + E E+L+ E I R +E
Sbjct: 608 KILSLNPDYPDLLYSLAVAQAKLGKQEEALETFEKLAAKNPEDLKIQRRKGKFAME 663
Score = 45.1 bits (105), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 67/157 (42%), Gaps = 23/157 (14%)
Query: 255 GLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCF-QDLILKDQ 313
GL L+K R + SI+V + ++ D + + N G+A + E++ F Q L + +
Sbjct: 12 GLGLIKQKRYEKSINVFNKIVDKDSGHTGALFNRGLALLKIKKPEEALDSFDQVLHFEPE 71
Query: 314 NHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHI 373
N A L K G LA L++ A A E AL+ +P I
Sbjct: 72 NFDA---------LYKKGIALA----------TLEKFEA---ALETYDNALEINPDNPKI 109
Query: 374 WANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYA 410
W A+ + +S C EKA +LEP C S YA
Sbjct: 110 WYQKGLAFAELEKNEASILCFEKAIELEPECGSAWYA 146
Score = 39.3 bits (90), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 41/220 (18%), Positives = 82/220 (37%), Gaps = 32/220 (14%)
Query: 231 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 290
EE L +E ++ + WN G++L K GR + ++ +++ P+ D N G+
Sbjct: 498 EEALEDFEEGLRLNPYLEKGWNNKGIVLGKLGRTEEALEAFEKAVSLRPDFEDAWKNRGL 557
Query: 291 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQA 350
D E++++ F +++ + ++ N G L +
Sbjct: 558 ILLAVDDYEKASEAFDEVLKTNPEDLDSIYN---------------------RGTALLKL 596
Query: 351 SAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST--- 407
A EC L +P + +LA A G + + EK A P +
Sbjct: 597 GKTETALECFEKILSLNPDYPDLLYSLAVAQAKLGKQEEALETFEKLAAKNPEDLKIQRR 656
Query: 408 --RYAVAVSRIK------DAERSQEPTEQLSWAGNEMASI 439
++A+ + + D S++P + +W +A I
Sbjct: 657 KGKFAMEIGKYDTALQAFDQVLSEKPESREAWYRKGLALI 696
>gi|398833242|ref|ZP_10591379.1| tetratricopeptide repeat protein,tetratricopeptide repeat protein
[Herbaspirillum sp. YR522]
gi|398221902|gb|EJN08297.1| tetratricopeptide repeat protein,tetratricopeptide repeat protein
[Herbaspirillum sp. YR522]
Length = 653
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 88/204 (43%), Gaps = 27/204 (13%)
Query: 136 EEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIA 195
+E + S KT L+ PK+ +AH + Y +L QP A Y++ EI + A
Sbjct: 208 KESLESHKTALL----MDPKDTYAHSKIADAYLKLDQPDLAHEHYQQIIEIAPKDPNSYA 263
Query: 196 RPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLG 255
R V I Q + ++E + K++++ D R A+ +N LG
Sbjct: 264 R----LAVSIAATQ------------------QRIDEAMELFKKALEIDPRHALTYNNLG 301
Query: 256 LILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQD-LILKDQN 314
++L G+ ++S L P + N+ + G +++ K + LI++++
Sbjct: 302 VVLHDQGKTMEALSYFEKALENQPTYLTALHNMSLGQLLHGRLKEGWKNHESRLIVRERT 361
Query: 315 HPAALINYAALLLCKYGSVLAGAG 338
H +I+ L+ K+ V + AG
Sbjct: 362 HVYRVIHKLFNLIPKWDGVSSLAG 385
>gi|159904605|ref|YP_001548267.1| hypothetical protein MmarC6_0213 [Methanococcus maripaludis C6]
gi|159886098|gb|ABX01035.1| TPR repeat-containing protein [Methanococcus maripaludis C6]
Length = 409
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/191 (21%), Positives = 82/191 (42%), Gaps = 19/191 (9%)
Query: 228 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 287
E+ +E + +S + ++WN LG I ++ + S+I LA+D N
Sbjct: 140 EKYDESIEAFDKSTGNYEEIVLIWNELGYIYYQNEKYDSAIVCFDKALALDRNLKYSFNG 199
Query: 288 LGIAYFQSGDMEQSAKCFQDLILKDQNHPAALI----------NYAALLLCKYGSVLAGA 337
G+ Y + +Q+ +CF + I +D+ + A+ NY+ +LC ++
Sbjct: 200 KGLCYEKKEQYDQAIECFDNAIAQDKFYYDAIYNKGIVCYSLKNYSGTILCFEKAIELN- 258
Query: 338 GANTGEGACLDQASAVNVAKECLLA------ALKADPKAAHIWANLANAYYLTGDHRSSG 391
NT +A ++ +E A A++ DP+ W+ + +Y ++ S
Sbjct: 259 --NTNAYCYFYKADSLKCMEEYEKAVLNYEKAVELDPENPVFWSGIGLSYNYLKEYNLSI 316
Query: 392 KCLEKAAKLEP 402
+ EKA ++ P
Sbjct: 317 QAYEKAVQINP 327
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 60/323 (18%), Positives = 112/323 (34%), Gaps = 39/323 (12%)
Query: 228 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 287
EE E+ L +S++ D+ W G+ L + SI
Sbjct: 106 EEYEKALYYFNKSLEIDSSVGKTWFYKGVCLKMLEKYDESIEAFDKSTGNYEEIVLIWNE 165
Query: 288 LGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL 347
LG Y+Q+ + + CF + D+N + G+G C
Sbjct: 166 LGYIYYQNEKYDSAIVCFDKALALDRNLKYSF---------------------NGKGLCY 204
Query: 348 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 407
++ + A EC A+ D N Y ++ + C EKA +L
Sbjct: 205 EKKEQYDQAIECFDNAIAQDKFYYDAIYNKGIVCYSLKNYSGTILCFEKAIELNNTNAYC 264
Query: 408 RYAVAVSRIKDAERSQEPTEQLSWAGNEMASILREGDPVQIEP--PIAWAGFAAVQKTHH 465
+ A D+ + E E+ ++L V+++P P+ W+G
Sbjct: 265 YFYKA-----DSLKCMEEYEK---------AVLNYEKAVELDPENPVFWSGIGLSYNYLK 310
Query: 466 EVAAAFETEEN--ELSKMEECAGAGESAFLDQASAVNVAKECLLAALKADPKAAHIWANL 523
E + + E +++ ++ + + N + C AL+ + K + W L
Sbjct: 311 EYNLSIQAYEKAVQINPKDDVLWSNLGYLQYKNKNYNESISCFEKALELNNKNKYAWNGL 370
Query: 524 ANAYYLTGDHRSSGKCLEKVLMV 546
N+Y L ++ S C EK + +
Sbjct: 371 GNSYLLIKNYEKSLICYEKAIEI 393
>gi|45358236|ref|NP_987793.1| hypothetical protein MMP0673 [Methanococcus maripaludis S2]
gi|44920993|emb|CAF30229.1| TPR repeat [Methanococcus maripaludis S2]
Length = 409
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 61/335 (18%), Positives = 123/335 (36%), Gaps = 57/335 (17%)
Query: 225 LEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCD- 283
L EE ++ L + ++ D W G+ L G S+ A D + D
Sbjct: 103 LSQEEYDKALYYYNKLLEIDNSVGKTWFYKGICLKMLGNYDESVE------AFDKSTGDY 156
Query: 284 -----CIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAG 338
+LG Y+Q+G+ +++ CF + D N +L
Sbjct: 157 ETLFLTWNDLGYCYYQNGEYDKAIGCFDKALTLDGNLKYSL------------------- 197
Query: 339 ANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAA 398
G+G C ++ +A EC A+ D N + Y + + + C EKA
Sbjct: 198 --NGKGLCCEKKEQYTMAVECFDKAVIQDECYYDAIYNKGISCYKSKKYSCAISCFEKAL 255
Query: 399 KLE---PNCMSTRYAVAVSRIKDAERSQEPTEQLSWAGNEMASILREGDPVQIEP--PIA 453
L P C + A +++R+ + E++ +L ++++ PI
Sbjct: 256 DLNNSNPYCYFYK-ADSLNRLGEYEKA----------------VLNYKKAIELDSKNPIF 298
Query: 454 WAGFAAVQKTHHEVAAAFETEEN--ELSKMEECAGAGESAFLDQASAVNVAKECLLAALK 511
W+G +E ++ ++ E EL+ ++ + + + N + +L
Sbjct: 299 WSGLGLSYNYLNEYNSSIQSYEKAVELNPEDDISWSNLGYLQYKNKNYNESISYFEKSLD 358
Query: 512 ADPKAAHIWANLANAYYLTGDHRSSGKCLEKVLMV 546
+ + W L N+Y L ++ + C +K + +
Sbjct: 359 LNSNNKYAWNGLGNSYLLLKNYEKALMCYDKAIEI 393
>gi|268325019|emb|CBH38607.1| conserved hypothetical protein, containing tetratricopeptide
repeats [uncultured archaeon]
Length = 425
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 84/209 (40%), Gaps = 17/209 (8%)
Query: 228 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 287
++ E + ++++ D A +N GL + + +I + + + PN+ N
Sbjct: 215 KQYERAIEDFNKTIELDPNSAAAYNNRGLTYDNLKQYERAIEDFNKTIELIPNHTFAYNN 274
Query: 288 LGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINY--AALLLCKYGSVLAG--------- 336
G+ Y E++ + F I D N AA N A L +Y +
Sbjct: 275 RGLTYNNLKQYERAIEDFNKTIELDPNSAAAYNNRGNAYRKLEEYERAIEDFNKTIELDS 334
Query: 337 --AGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCL 394
AG+ G D A E ++ DP +A I+ N NA+ G + + +
Sbjct: 335 NYAGSYYNRGLTYDDLKQYERAIEDFNKTIELDPNSAVIYTNRGNAFKDLGQYERAIEDY 394
Query: 395 EKAAKLEPN---CMSTRYAVAVSRIKDAE 420
KA +L+PN R +A+S++K+ E
Sbjct: 395 NKAIELDPNDTDAYENR-ELALSKLKEQE 422
>gi|194578961|ref|NP_001124099.1| tetratricopeptide repeat protein 13 precursor [Danio rerio]
gi|190338937|gb|AAI63293.1| Zgc:194598 [Danio rerio]
Length = 826
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 50/105 (47%), Gaps = 1/105 (0%)
Query: 234 LSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYF 293
+ ++S++ Q + GL G L+ +I V L + + D +LG AY
Sbjct: 235 MEDFQQSLELKKNQPIAMLYKGLTFFHRGLLKEAIEVFKEALKLKSDFIDAYKSLGQAYR 294
Query: 294 QSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAG 338
+ GD+E + + FQ +L DQNH +L ++L +GS+ G
Sbjct: 295 ELGDIENAMESFQKALLLDQNHIQSL-QLRGMMLYHHGSLQEAIG 338
>gi|242278108|ref|YP_002990237.1| hypothetical protein Desal_0632 [Desulfovibrio salexigens DSM 2638]
gi|242121002|gb|ACS78698.1| TPR repeat-containing protein [Desulfovibrio salexigens DSM 2638]
Length = 158
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 55/113 (48%), Gaps = 4/113 (3%)
Query: 230 LEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLG 289
E+ + + K+ ++S +W LG + + + +I S LA++P+N + +LG
Sbjct: 22 FEQQIEETKKLLESQPDSVNLWTKLGNLYFDTDQYAKAIDAYSKSLAIEPDNAHVLTDLG 81
Query: 290 IAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLC----KYGSVLAGAG 338
+ Y +SG+ +++ + F IL H A +N +L K G++ A G
Sbjct: 82 VMYRRSGNPQKAVENFDKAILAAPKHETARLNKGIVLYYDLKDKAGAIQAWNG 134
>gi|113478010|ref|YP_724071.1| hypothetical protein Tery_4626 [Trichodesmium erythraeum IMS101]
gi|110169058|gb|ABG53598.1| TPR repeat [Trichodesmium erythraeum IMS101]
Length = 452
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 64/171 (37%), Gaps = 21/171 (12%)
Query: 230 LEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLG 289
+E +S ++Q A WN G+ L++ Q +I+ + V P+ D N G
Sbjct: 274 FDEAISSYDRALQIRADYADAWNNRGVCLIELQHYQEAINSFEQGIKVKPDYADAWNNRG 333
Query: 290 IAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQ 349
+ + +++ K + N A+ N YG A GACL +
Sbjct: 334 VCLAKIQKYQEAVKSY--------NQAIAIKN-------DYGD------AWNNRGACLMK 372
Query: 350 ASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKL 400
A C A+K P W N A Y L GD + K EKA L
Sbjct: 373 LGIYGEAIACFDNAVKIQPDFFSAWYNQARCYSLKGDVDMALKSFEKAVSL 423
>gi|83814061|ref|YP_446792.1| hypothetical protein SRU_2700 [Salinibacter ruber DSM 13855]
gi|83755455|gb|ABC43568.1| TPR repeat protein [Salinibacter ruber DSM 13855]
Length = 554
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 94/414 (22%), Positives = 151/414 (36%), Gaps = 62/414 (14%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKA-------EEILLRC-----------EADIA 195
P + A G++ LG+P +A+ +YE+A E L+ EA A
Sbjct: 153 PYTSDAWMRRGILLNNLGRPEEALEAYEQALDVNPTDTETLINLGITLDSLGRVDEALEA 212
Query: 196 RPELLSLVQIHHAQCLLPESSGDNSLDKELE-PEELEEILSKLKESMQSDTRQAVVWNTL 254
E LS+ + H + L +L LE E+LE + + VW L
Sbjct: 213 YDEALSINPL-HGEALF-------NLGVTLERDEQLEAAVEAFQRCADVYPEHPEVWYEL 264
Query: 255 GLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQN 314
G + G + S+ + L +DP + D N GI + G ++ + + +
Sbjct: 265 GYCYDRLGEDEKSVEAYDNHLDIDPYSKDAWYNRGIVLNRLGRFGEAVESYDMALAIHDE 324
Query: 315 HPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIW 374
+A N A AN G+ + A E L+ + A +
Sbjct: 325 FASAYYN------------RGNAEANQGD---------LEAAVESYERVLELEGPDAATY 363
Query: 375 ANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQEPTEQLSWAGN 434
NLA AY GD R++ EK L+ N Y + D ER +E E +A N
Sbjct: 364 YNLALAYEEQGDLRAARTYYEKTLDLKSNYPEAWYGLGCCFDTD-ERPEEALECFRYAVN 422
Query: 435 EMASILREGDPVQIEPPIAWAGFAAVQKTHHEVAAAFETEEN--ELSKMEECAGAGESAF 492
A++ P W A ++ A E+ ++ L + E A G +
Sbjct: 423 LDANV-----------PKFWTARADCAYKVGKLDEALESYQHAVRLDESNEHAWTGYAET 471
Query: 493 LDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKVLMV 546
L + A E AL+ DPK+A+ + A A G S + L+ +
Sbjct: 472 LLEKEQPEEALEAYRQALELDPKSANTYFRQAKALLALGRADESIRALKTAFRL 525
>gi|427735486|ref|YP_007055030.1| hypothetical protein Riv7116_1944 [Rivularia sp. PCC 7116]
gi|427370527|gb|AFY54483.1| tetratricopeptide repeat protein [Rivularia sp. PCC 7116]
Length = 314
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 82/224 (36%), Gaps = 22/224 (9%)
Query: 231 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 290
++ ++ K+++Q D A + LGL L + G+LQ + V+P NLG
Sbjct: 68 QDAINAFKQAIQLDPSLAPAYYNLGLALRQVGQLQPAADAFYQATRVNPKFALAYANLGG 127
Query: 291 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAAL---------------LLCKYGSVLA 335
A + ++ Q+ Q + D A N L KY +
Sbjct: 128 ALLEGNNLGQAENYLQRSLEIDSKLGVAYYNLGLLHQQKEDCSKAVKSFRKAMKYSNKAP 187
Query: 336 GAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLE 395
G C Q AK A+K +PK NL + Y G H + +
Sbjct: 188 EPAYQI--GLCYMQERKFKRAKTAFNQAIKMNPKYPEAHYNLGSILYTQGKHEQALEAFR 245
Query: 396 KAAKLEPNCMSTRYAVAVSRIK-----DAERSQEPTEQLSWAGN 434
KAA+ +P+ S Y ++ I+ DA R + L A N
Sbjct: 246 KAAEADPDYPSAYYGAGLAFIQMKQFPDAMRVLQYARDLFLAQN 289
>gi|91201196|emb|CAJ74256.1| hypothetical protein kuste3493 [Candidatus Kuenenia
stuttgartiensis]
Length = 234
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/189 (20%), Positives = 73/189 (38%), Gaps = 22/189 (11%)
Query: 231 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 290
EE + +++++D +N L +I K + +I + +A+ P + + NLGI
Sbjct: 64 EEAIGAYIKTIETDANFVKAYNNLSVIYYKLKQTDKAIETIKKAIAISPKYSEALYNLGI 123
Query: 291 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQA 350
Y++ ++ K F+D + ++ N G A A A +
Sbjct: 124 YYYEKTQYNEAIKAFKDAVKRNTRFDMGFYN--------LGVAYAAIDATDESIAAFKRV 175
Query: 351 SAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYA 410
+N PK + NL AY + + L+KA ++ P T +A
Sbjct: 176 IELN-------------PKYPDAYYNLGVAYSKKNQFDEAIQLLKKALEINPKDSKTHFA 222
Query: 411 VA-VSRIKD 418
+ + +KD
Sbjct: 223 LGIIYTVKD 231
>gi|198422562|ref|XP_002123464.1| PREDICTED: similar to tetratricopeptide repeat domain 8 isoform 3
[Ciona intestinalis]
Length = 468
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 53/253 (20%), Positives = 101/253 (39%), Gaps = 42/253 (16%)
Query: 161 FLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESSGDNS 220
LLG +YQR+ QPL+++++Y++ E + D R L+++ ++H
Sbjct: 216 LLLGKVYQRMDQPLQSIATYKQGLE---KFPDD--RSLLVAIARVHD------------- 257
Query: 221 LDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPN 280
E +L++ K+ +++D ++ + + + SI + LL + +
Sbjct: 258 -----EMGQLDDATKWYKDVLETDGVNVEAIASIAANYFYTDQPEISIRLYRRLLQMGIH 312
Query: 281 NCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGAN 340
N + NLG+ + + + + CF + ++ + Y V G G N
Sbjct: 313 NVELFNNLGLCCYFAQQYDMTMNCFDRALSLAEDEQLGDVWY------NISHVALGIGDN 366
Query: 341 TGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKL 400
N+A +CL A+ AD + NLA GD + L AA+L
Sbjct: 367 -------------NLAYQCLRLAIAADNGHTEAYNNLAVLELRRGDVERAKSLLRSAAEL 413
Query: 401 EPNCMSTRYAVAV 413
P+ Y +A
Sbjct: 414 APHAYEHHYNLAT 426
>gi|323491541|ref|ZP_08096720.1| TPR repeat-containing protein [Vibrio brasiliensis LMG 20546]
gi|323314117|gb|EGA67202.1| TPR repeat-containing protein [Vibrio brasiliensis LMG 20546]
Length = 334
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 69/163 (42%), Gaps = 22/163 (13%)
Query: 258 LLKSGRLQSSISVLS-----SLLAV--DPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 310
L GR+ S L+ L+A+ +PNN + LGI Y ++GD+EQ F +
Sbjct: 87 LFNIGRIHQSRGNLALAEKAYLIAIEENPNNIKVLEQLGILYSRNGDIEQGTSYFMRAVN 146
Query: 311 KDQ---NHPAALIN--------YAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKEC 359
DQ N+ L N A L + K+ A G G D +A+
Sbjct: 147 ADQIRFNNNKTLSNNDLTTVESVAKLQVDKHSPEYALMGL----GVVADLNKDHELAQAF 202
Query: 360 LLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 402
AL DP + N+ ++Y+ GD+R + + + +A +P
Sbjct: 203 YKQALSIDPDSVKTLTNVGYSFYMAGDYRKAQRFILQALDKDP 245
>gi|145506301|ref|XP_001439116.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124406290|emb|CAK71719.1| unnamed protein product [Paramecium tetraurelia]
Length = 815
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 87/186 (46%), Gaps = 15/186 (8%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIA----------RPELLSLV 203
PK+A A++ G+++ G+ KA+ Y A I L DIA + E +
Sbjct: 37 PKSAIAYYNRGILFCEKGEKEKALKDYNMA--IKLNPNYDIAYYNRGVLFGEQGEKDKAI 94
Query: 204 QIHHAQCLLPESSGDNSLDKELEPEEL---EEILSKLKESMQSDTRQAVVWNTLGLILLK 260
Q ++ L E++ + +++ + ++L E+ L +++ + A +N LG +L
Sbjct: 95 QDYNTVIKLNENNTNAYINRGILFKQLGEHEKALQDYNMAIKLNPNDADAFNNLGNLLDD 154
Query: 261 SGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALI 320
G+ ++ ++ + ++PN+ N G+ + Q G+ E++ + F I D N+ A I
Sbjct: 155 QGQKDKALQNFNTAIKLNPNDATAYYNRGVVFKQKGEKEKALEDFNMAIKFDSNYIDAYI 214
Query: 321 NYAALL 326
N L
Sbjct: 215 NRGVLF 220
Score = 42.7 bits (99), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 55/281 (19%), Positives = 115/281 (40%), Gaps = 32/281 (11%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLR-CEADIARPELLS-------LVQI 205
P A A++ G+++++ G+ KA+ + A + +A I R L ++
Sbjct: 241 PNYATAYYNRGVVFKQKGEKQKALEDFNMAIKFDSNYIDAYINRGVLFKQQGEKEKALKD 300
Query: 206 HHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQS---DTRQAVVWNTLGLILLKSG 262
++ L + D +++ + ++L E L++ Q+ + + A+ + G++ + G
Sbjct: 301 YNTAIKLNRNYADAYINRGVLFKQLGETKKALQDYNQAIRLNPQYAIGYYNRGVLFCELG 360
Query: 263 RLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINY 322
Q ++ +++ ++PN N G+ Y + G++E + K F I + N+ A N
Sbjct: 361 EKQKALQDFKNVIRLNPNYATAYQNRGVLYGEQGEIENALKDFDMAIKLNPNYATAYQN- 419
Query: 323 AALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYY 382
+L + G + E A D A+K +P A + N N +
Sbjct: 420 RGVLFGEQGQI---------ENALTD-----------FDIAIKLNPTYASAYQNRGNLFD 459
Query: 383 LTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQ 423
G+ + + A KL PN Y + + E+ Q
Sbjct: 460 KKGEKDKALQDYNMAIKLNPNYDIAYYTRGLIFKQQGEKVQ 500
Score = 42.0 bits (97), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 104/260 (40%), Gaps = 50/260 (19%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 213
P A A+ G ++ + G+ KA+ Y A I L DIA ++ + L+
Sbjct: 445 PTYASAYQNRGNLFDKKGEKDKALQDYNMA--IKLNPNYDIA----------YYTRGLIF 492
Query: 214 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 273
+ G E + L +++Q + A + G++ + G ++ ++ +
Sbjct: 493 KQQG-----------EKVQALQDFDKAIQLNLNYATAYYNRGVLYGEQGEIEKALQDFNM 541
Query: 274 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSV 333
+ ++PN N G+ Y Q G+ E K FQD + + +P NYA +
Sbjct: 542 AIKLNPNYDTAYQNRGVLYKQQGEKE---KAFQDYNMAIKLNP----NYATAYQNR---- 590
Query: 334 LAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYY----LTGDHRS 389
G +++ +G Q A + A+K +P N A AYY L G+
Sbjct: 591 --GKQSSSRKGVLYKQQGEKEKALQDYHTAIKLNP-------NFATAYYNRGVLFGEQGE 641
Query: 390 SGKCLE---KAAKLEPNCMS 406
K L+ +A +L PN +
Sbjct: 642 KEKALQDYNEAIQLNPNYAT 661
Score = 39.3 bits (90), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 32/173 (18%), Positives = 75/173 (43%), Gaps = 23/173 (13%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 213
P +A A++ G+++++ G+ KA+ + A ++ ++ + + + + +L
Sbjct: 173 PNDATAYYNRGVVFKQKGEKEKALEDFNMA----IKFDS--------NYIDAYINRGVLF 220
Query: 214 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 273
+ G E E+ L +++ + A + G++ + G Q ++ +
Sbjct: 221 KQQG-----------EKEKALHDYNLAIKLNPNYATAYYNRGVVFKQKGEKQKALEDFNM 269
Query: 274 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL 326
+ D N D N G+ + Q G+ E++ K + I ++N+ A IN L
Sbjct: 270 AIKFDSNYIDAYINRGVLFKQQGEKEKALKDYNTAIKLNRNYADAYINRGVLF 322
>gi|118581067|ref|YP_902317.1| hypothetical protein Ppro_2656 [Pelobacter propionicus DSM 2379]
gi|118503777|gb|ABL00260.1| Tetratricopeptide TPR_2 repeat protein [Pelobacter propionicus DSM
2379]
Length = 568
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 99/228 (43%), Gaps = 30/228 (13%)
Query: 94 GKKINKLGKCRSRIS---SKMDSALEFGVDADGDQSGLGTSSSSREEKVSSLKTGLVHVA 150
GK +G R+ I SK D+ L V T EE V++LK+ +
Sbjct: 123 GKDTEAVGYLRTAIQLDPSKEDAYLHLAVSL--------TRMFEYEEAVTTLKS----LV 170
Query: 151 RKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEI---LLRCEADIARP-----ELLSL 202
++ P++ ++ LG Y ++ AV ++K+ E+ + D+A +
Sbjct: 171 KQNPESVLGYYYLGRSYSQMKLYRDAVGYFKKSIELRPEFSQAAIDMAASYEALGDYTKA 230
Query: 203 VQIHHAQCLLPESSGDNSLDKEL-----EPEELEEILSKLKESMQSDTRQAVVWNTLGLI 257
++I+H LL E ++ + L + +E L L +S S A +GLI
Sbjct: 231 IEIYHD--LLDEDESRTAVQQRLIQLLIQQRRFQEALEYLNQSAGSGLSSAETMRKIGLI 288
Query: 258 LLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCF 305
L+ + +I+V + LL DP+ LG+AY + GD++++ F
Sbjct: 289 HLELEQYDEAIAVFNDLLEKDPSAHHVRLYLGVAYEEKGDLDRAKAEF 336
>gi|196000432|ref|XP_002110084.1| hypothetical protein TRIADDRAFT_53679 [Trichoplax adhaerens]
gi|190588208|gb|EDV28250.1| hypothetical protein TRIADDRAFT_53679 [Trichoplax adhaerens]
Length = 1330
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 126/319 (39%), Gaps = 61/319 (19%)
Query: 120 DADGDQSGLGTS---SSSREEKVS----SLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQ 172
D G + LG + EE +S SLK L + P A ++ +G +Y G+
Sbjct: 1031 DVAGSYNNLGNAYRHQGKHEEAISMYEKSLKITLSVLGHNHPDIAASYNNMGAVYSNQGK 1090
Query: 173 PLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEE 232
+A+S YEK+ +I L D P++ S +N + +LEE
Sbjct: 1091 YEEAISMYEKSLKIRLSV-LDHNHPDI--------------AGSYNNLGNAHRHQGKLEE 1135
Query: 233 ILSKLKESMQ--------SDTRQAVVWNTLGLILLKSGRLQSSISV--------LSSLLA 276
+S ++S++ + AV +N LG G+L+ +IS+ LS L
Sbjct: 1136 AISMYEKSLKIRLSVLDHNHPDVAVSYNNLGNAHRHQGKLEEAISMYEKSLKITLSVLDH 1195
Query: 277 VDPNNCDCIGNLGIAYFQSGDMEQSAKCFQD-----LILKDQNHPAALINYAALLLCKYG 331
P+ N+G Y G E++ ++ L + D NHP ++Y
Sbjct: 1196 NHPHVAAIYNNMGAVYVDQGKHEEAISMYEKSLKITLSVLDHNHPHVAVSY--------- 1246
Query: 332 SVLAGAGANTGEGACLDQASAVNVAKECLLAALKA----DPKAAHIWANLANAYYLTGDH 387
+ + +N G+ A+++ K+ L P A + NL NAY G H
Sbjct: 1247 NNIRAVYSNQGK-----HEEAISMYKKSLKITSSVLGHNHPDVALSYNNLGNAYDKQGKH 1301
Query: 388 RSSGKCLEKAAKLEPNCMS 406
+ EK+ K+ + +S
Sbjct: 1302 EEAISMYEKSLKVTSSVLS 1320
Score = 46.2 bits (108), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 78/350 (22%), Positives = 140/350 (40%), Gaps = 76/350 (21%)
Query: 120 DADGDQSGLGTSSSSR---EEKVS----SLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQ 172
D G S +G S++ EE +S SLK L + P A ++ +G +Y+ G+
Sbjct: 527 DVAGSYSNMGAVYSNQGKYEEAISMNKKSLKIRLSVLGHNHPDVAASYNNMGEVYRHQGK 586
Query: 173 PLKAVSSYEKAEEILLRC----EADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPE 228
+A+S YEK+ +I L D+A +S +N +
Sbjct: 587 HEEAISMYEKSLKITLSVLGHNHPDVA-------------------ASYNNLGNTYFNQG 627
Query: 229 ELEEILSKLKESMQ--------SDTRQAVVWNTLGLILLKSGRLQSSISV--------LS 272
+ EE +S ++S++ + AV++N +G + L G+ + +IS+ LS
Sbjct: 628 KYEEAISMYEKSLKIRLSVLGHNHPDVAVLYNNMGAVNLDQGKYEEAISMYEKSLKITLS 687
Query: 273 SLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQD-----LILKDQNHPAALINYAALLL 327
L P+ N+G AY G E++ ++ L + NHP
Sbjct: 688 VLGHNHPDVAASYNNMGEAYRYQGKHEEAISMYEKSLKITLSVLGHNHPD---------- 737
Query: 328 CKYGSVLAGAGANTG-----EGACLDQASAVNVAKECLLAALKAD-PKAAHIWANLANAY 381
+AG+ N G +G + S + + L+ L + P A + NL NAY
Sbjct: 738 ------IAGSYNNLGNAYRHQGKHEEAISMYEKSLKITLSVLGHNHPDVAGSYNNLGNAY 791
Query: 382 YLTGDHRSSGKCLEKAAKLEPNCMSTRY---AVAVSRIKDAERSQEPTEQ 428
G + + EK+ K+ + + + A + + + +A R Q E+
Sbjct: 792 SNQGKYEEAISMYEKSLKIRLSVLDHNHPDIAASYNNMGEAYRHQGKREE 841
Score = 45.4 bits (106), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 81/371 (21%), Positives = 150/371 (40%), Gaps = 76/371 (20%)
Query: 120 DADGDQSGLGTSSSSR---EEKVS----SLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQ 172
D G + +GT S++ EE +S SLK L + P A ++ +G +Y+ G+
Sbjct: 905 DVAGSYNNIGTVYSNQGKHEEAISMKKKSLKIRLSVLGHNHPDVAASYNNMGEVYRHQGK 964
Query: 173 PLKAVSSYEKAEEILL-------------------------RCEADIARPE---LLSLVQ 204
+A+S YEK+ +I L + E I+ E + L
Sbjct: 965 HEEAISMYEKSLKITLSVLGHNHPHVAASYNNLGNAYLDHGKHEEAISMYEKSLKIRLAV 1024
Query: 205 IHHAQCLLPESSGD-NSLDKELEPE-ELEEILSKLKESMQ--------SDTRQAVVWNTL 254
+ H P+ +G N+L + + EE +S ++S++ + A +N +
Sbjct: 1025 LGHNH---PDVAGSYNNLGNAYRHQGKHEEAISMYEKSLKITLSVLGHNHPDIAASYNNM 1081
Query: 255 GLILLKSGRLQSSISVLSSLLAV-----DPNNCDCIG---NLGIAYFQSGDMEQSAKCFQ 306
G + G+ + +IS+ L + D N+ D G NLG A+ G +E++ ++
Sbjct: 1082 GAVYSNQGKYEEAISMYEKSLKIRLSVLDHNHPDIAGSYNNLGNAHRHQGKLEEAISMYE 1141
Query: 307 D-----LILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLL 361
L + D NHP ++Y L A+ +G + S + + L
Sbjct: 1142 KSLKIRLSVLDHNHPDVAVSYNNL-----------GNAHRHQGKLEEAISMYEKSLKITL 1190
Query: 362 AALKAD-PKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRY---AVAVSRIK 417
+ L + P A I+ N+ Y G H + EK+ K+ + + + AV+ + I+
Sbjct: 1191 SVLDHNHPHVAAIYNNMGAVYVDQGKHEEAISMYEKSLKITLSVLDHNHPHVAVSYNNIR 1250
Query: 418 DAERSQEPTEQ 428
+Q E+
Sbjct: 1251 AVYSNQGKHEE 1261
Score = 43.5 bits (101), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 114/284 (40%), Gaps = 36/284 (12%)
Query: 135 REEKVS----SLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRC 190
EE +S SLK L P A ++ +G +Y G+ +A+S Y+K+ +I L
Sbjct: 251 HEEAISMYEKSLKITLSIFGHNHPDVAVSYNNIGAVYSNQGKYEEAISMYKKSLKIRLSV 310
Query: 191 EADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVV 250
+S + L +S + ++ + + LE I+S L + D AV
Sbjct: 311 FGHNHPNAAVSYNNL--GTVYLDQSKHEEAIS--MYKKSLEIIISVLGHN-HPDV--AVS 363
Query: 251 WNTLGLILLKSGRLQSSISV--------LSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSA 302
+N +G + G+ + +IS+ LS L P+ NLG AY G E++
Sbjct: 364 YNNMGAVYSNQGKHEEAISMYEKSLKIKLSVLGHNHPDITVSYNNLGNAYLDQGKYEEAI 423
Query: 303 KCFQD-----LILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAK 357
++ L + D NHP ++Y + A +G + S +
Sbjct: 424 SMYEKSLKIRLSVLDHNHPDIAVSYNNM-----------GEAYRHQGKHEEAISMYEQSL 472
Query: 358 ECLLAALKAD-PKAAHIWANLANAYYLTGDHRSSGKCLEKAAKL 400
+ L+ L + P A + NL NAY H + EK+ K+
Sbjct: 473 KIRLSVLGHNHPDVAMSYNNLGNAYRHQSKHEEAISMYEKSLKI 516
Score = 42.7 bits (99), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 118/306 (38%), Gaps = 47/306 (15%)
Query: 120 DADGDQSGLGTSSSSR---EEKVS----SLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQ 172
D G + LG + S++ EE +S SLK L + P A ++ +G Y+ G+
Sbjct: 779 DVAGSYNNLGNAYSNQGKYEEAISMYEKSLKIRLSVLDHNHPDIAASYNNMGEAYRHQGK 838
Query: 173 PLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLD--KELEPEEL 230
+A+S YEK+ +I L L H +L + G LD K E +
Sbjct: 839 REEAISMYEKSLKIRLSV-----------LGHNHPDVAVLYNNMGAVYLDQGKHEEAISM 887
Query: 231 EEILSKLKESMQSDTRQAVV--WNTLGLILLKSGRLQSSISV--------LSSLLAVDPN 280
E K++ S+ V +N +G + G+ + +IS+ LS L P+
Sbjct: 888 HEKSLKIRLSVLGHNHPDVAGSYNNIGTVYSNQGKHEEAISMKKKSLKIRLSVLGHNHPD 947
Query: 281 NCDCIGNLGIAYFQSGDMEQSAKCFQD-----LILKDQNHPAALINYAALLLCKYGSVLA 335
N+G Y G E++ ++ L + NHP +Y L
Sbjct: 948 VAASYNNMGEVYRHQGKHEEAISMYEKSLKITLSVLGHNHPHVAASYNNL---------- 997
Query: 336 GAGANTGEGACLDQASAVNVAKECLLAALKAD-PKAAHIWANLANAYYLTGDHRSSGKCL 394
A G + S + + LA L + P A + NL NAY G H +
Sbjct: 998 -GNAYLDHGKHEEAISMYEKSLKIRLAVLGHNHPDVAGSYNNLGNAYRHQGKHEEAISMY 1056
Query: 395 EKAAKL 400
EK+ K+
Sbjct: 1057 EKSLKI 1062
>gi|88603649|ref|YP_503827.1| tetratricopeptide TPR_2 [Methanospirillum hungatei JF-1]
gi|88189111|gb|ABD42108.1| Tetratricopeptide TPR_2 [Methanospirillum hungatei JF-1]
Length = 436
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 99/247 (40%), Gaps = 36/247 (14%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 213
P A LLG Y+ L Q +A+ +YE+A E+ D + + A L
Sbjct: 223 PDYTAAWLLLGNSYKVLNQFDEAIDAYEEAMEL------DPGSTKYRKYI----ADVYL- 271
Query: 214 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 273
G +L KE +P+E E K +++ W + G+ K G +++ +
Sbjct: 272 -VMGKEALYKEGKPQEAIEYFDK---TIRMIANHITAWFSKGVAYKKLGAYRNATACFLK 327
Query: 274 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSV 333
++ +DP N + ++G+ E++ +C+ + I D +H A+ K G++
Sbjct: 328 VVEMDPQNGHAYYEMAQILEKTGNNEEAIRCYLETIRCDPSHTDAMY--------KVGNL 379
Query: 334 LAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKC 393
L G A D+ L P+++ W A G + + +C
Sbjct: 380 LMEGGDYKNAIAYFDR-------------VLDKIPESSVAWFAKGKALQRRGQQKDADRC 426
Query: 394 LEKAAKL 400
E+A+KL
Sbjct: 427 FERASKL 433
>gi|29653887|ref|NP_819579.1| hypothetical protein CBU_0547 [Coxiella burnetii RSA 493]
gi|161831595|ref|YP_001596478.1| TPR repeat-containing methyltransferase [Coxiella burnetii RSA 331]
gi|29541150|gb|AAO90093.1| tetratricopeptide repeat family protein [Coxiella burnetii RSA 493]
gi|161763462|gb|ABX79104.1| tetratricopeptide repeat protein/methyltransferase [Coxiella
burnetii RSA 331]
Length = 561
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 90/223 (40%), Gaps = 31/223 (13%)
Query: 225 LEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDC 284
+E E + +++LK ++ + + ++ L + + G +I+ LA++P N D
Sbjct: 149 IELENYHQAIAELKRTVAMSSHHSAAFSQLAHVYMYLGDFSKAITYYEKRLALEPENADA 208
Query: 285 IGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEG 344
+ G+A+ + +++ F + +L + HP C Y LA A G+
Sbjct: 209 QYDCGLAHLKDNQFQKAIDYFTNALLLNPEHPD----------CHYS--LATAYLQRGDH 256
Query: 345 ACLDQASAVNVAKECLLAALKADPKAAHI--WANLANAYYLTGDHRSSGKCLEKAAKLEP 402
KE LL L+ K I + N+ + HR + ++A L+P
Sbjct: 257 ------------KEALLHYLRQLEKKPQIECYYNVGVLHMYQERHREAIDYFKQALTLDP 304
Query: 403 NCMSTRYAVA-----VSRIKDAERSQEPTEQLSWAGNEMASIL 440
N +A +++IK A E T L +E+ IL
Sbjct: 305 NYREAHLNIAAVYLKINQIKQAIEHYESTLVLKPNDSEIEHIL 347
>gi|356601809|gb|AET24906.1| magnetosome protein [Candidatus Desulfamplus magnetomortis BW-1]
Length = 249
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 70/155 (45%), Gaps = 13/155 (8%)
Query: 260 KSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAAL 319
+ G + + L +++ +D + D I LG+AY ++G + + K ++ +I ++ A
Sbjct: 92 QKGDTKKCVEFLENVVRIDNRDADIIYRLGVAYEKNGQPDSAIKAYKKVISLAPDNAKAH 151
Query: 320 INYAALLLCK--YGSVLA-----------GAGANTGEGACLDQASAVNVAKECLLAALKA 366
A LL+ K Y + L A N G D+ + A E A++
Sbjct: 152 YRKAVLLIKKQDYENALTDLEEAIQEKPDSAELNFRLGQVNDRLKNYDKAIEYFTRAVEL 211
Query: 367 DPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLE 401
+P+ + N+A Y DH S KCL++A ++E
Sbjct: 212 NPQFLAAFKNMALTYDSLNDHEGSLKCLKRALEIE 246
>gi|198422556|ref|XP_002123270.1| PREDICTED: similar to tetratricopeptide repeat domain 8 isoform 1
[Ciona intestinalis]
Length = 498
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 53/253 (20%), Positives = 101/253 (39%), Gaps = 42/253 (16%)
Query: 161 FLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESSGDNS 220
LLG +YQR+ QPL+++++Y++ E + D R L+++ ++H
Sbjct: 246 LLLGKVYQRMDQPLQSIATYKQGLE---KFPDD--RSLLVAIARVHD------------- 287
Query: 221 LDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPN 280
E +L++ K+ +++D ++ + + + SI + LL + +
Sbjct: 288 -----EMGQLDDATKWYKDVLETDGVNVEAIASIAANYFYTDQPEISIRLYRRLLQMGIH 342
Query: 281 NCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGAN 340
N + NLG+ + + + + CF + ++ + Y V G G N
Sbjct: 343 NVELFNNLGLCCYFAQQYDMTMNCFDRALSLAEDEQLGDVWY------NISHVALGIGDN 396
Query: 341 TGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKL 400
N+A +CL A+ AD + NLA GD + L AA+L
Sbjct: 397 -------------NLAYQCLRLAIAADNGHTEAYNNLAVLELRRGDVERAKSLLRSAAEL 443
Query: 401 EPNCMSTRYAVAV 413
P+ Y +A
Sbjct: 444 APHAYEHHYNLAT 456
>gi|294508725|ref|YP_003572784.1| hypothetical protein SRM_02912 [Salinibacter ruber M8]
gi|294345055|emb|CBH25833.1| Conserved hypothetical protein containing TPR domain [Salinibacter
ruber M8]
Length = 554
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 94/414 (22%), Positives = 151/414 (36%), Gaps = 62/414 (14%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKA-------EEILLRC-----------EADIA 195
P + A G++ LG+P +A+ +YE+A E L+ EA A
Sbjct: 153 PYTSDAWMRRGILLNNLGRPEEALEAYEQALDVNPTDTETLINLGITLDSLGRVDEALEA 212
Query: 196 RPELLSLVQIHHAQCLLPESSGDNSLDKELE-PEELEEILSKLKESMQSDTRQAVVWNTL 254
E LS+ + H + L +L LE E+LE + + VW L
Sbjct: 213 YDEALSINPL-HGEALF-------NLGVTLERDEQLEAAVEAFQRCADVYPEHPEVWYEL 264
Query: 255 GLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQN 314
G + G + S+ + L +DP + D N GI + G ++ + + +
Sbjct: 265 GYCYDRLGEDEKSVEAYDNHLDIDPYSKDAWYNRGIVLNRLGRFGEAVESYDMALAIHDE 324
Query: 315 HPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIW 374
+A N A AN G+ + A E L+ + A +
Sbjct: 325 FASAYYN------------RGNAEANQGD---------LEAAVESYERVLELEGPDAATY 363
Query: 375 ANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQEPTEQLSWAGN 434
NLA AY GD R++ EK L+ N Y + D ER +E E +A N
Sbjct: 364 YNLALAYEEQGDLRAARTYYEKTLDLKSNYPEAWYGLGCCFDTD-ERPEEALECFRYAVN 422
Query: 435 EMASILREGDPVQIEPPIAWAGFAAVQKTHHEVAAAFETEEN--ELSKMEECAGAGESAF 492
A++ P W A ++ A E+ ++ L + E A G +
Sbjct: 423 LDANV-----------PKFWTARADCAYKVGKLDEALESYQHAVRLDESNEHAWTGYAET 471
Query: 493 LDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKVLMV 546
L + A E AL+ DPK+A+ + A A G S + L+ +
Sbjct: 472 LLEKEQPEEALEAYRQALELDPKSANTYFRQAKALLALGRADESIRALKTAFRL 525
>gi|239946448|ref|ZP_04698204.1| tetratricopeptide TPR_2 [Rickettsia endosymbiont of Ixodes
scapularis]
gi|239920724|gb|EER20751.1| tetratricopeptide TPR_2 [Rickettsia endosymbiont of Ixodes
scapularis]
Length = 375
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/185 (21%), Positives = 73/185 (39%), Gaps = 21/185 (11%)
Query: 230 LEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLG 289
EE + + ++++ + G+ L G + SI + + P++ D N G
Sbjct: 131 YEEAIKEYNKAIKLKPDYVESYYNKGISLYNIGEYEESIIAYEKAIELKPDDADIYNNKG 190
Query: 290 IAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQ 349
+ F G E++ K + I + N A +IN +G L
Sbjct: 191 TSLFNLGQYEEAIKAYNKAIELNPND-AVVIN--------------------NKGTSLSD 229
Query: 350 ASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRY 409
A +C A++ +P A + N N++Y G + + K KA KL+P+ + + Y
Sbjct: 230 LEKYEEAIKCYNQAIELNPNDACSYYNKGNSFYKLGKYEEAIKEYNKAIKLKPDYVESYY 289
Query: 410 AVAVS 414
+S
Sbjct: 290 NKGIS 294
>gi|124024101|ref|YP_001018408.1| hypothetical protein P9303_24101 [Prochlorococcus marinus str. MIT
9303]
gi|123964387|gb|ABM79143.1| Hypothetical protein P9303_24101 [Prochlorococcus marinus str. MIT
9303]
Length = 725
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 86/191 (45%), Gaps = 27/191 (14%)
Query: 136 EEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIA 195
EE ++S + + P A A+F LGL+ + G +A++SY KA E+
Sbjct: 227 EEAIASYRKAI----EVKPDFADAYFALGLVMKEEGDVEEAIASYRKAIEV--------- 273
Query: 196 RPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLG 255
+P+ + A L+ + GD +EE ++ +++++ A + LG
Sbjct: 274 KPDF---ADAYFALGLVMKEEGD-----------VEEAIASYRKAIEVKPDFADAYFALG 319
Query: 256 LILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNH 315
L++ + G ++ +I+ + V P+ D LG+ + GD+E++ ++ I +
Sbjct: 320 LVMKEEGDVEEAIASYRKAIEVKPDFADAYFALGLVMKEEGDVEEAIASYRKAIEVKPDF 379
Query: 316 PAALINYAALL 326
A +N +L
Sbjct: 380 ADAYLNLGNVL 390
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 79/173 (45%), Gaps = 27/173 (15%)
Query: 136 EEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIA 195
EE ++S + + P A A+F LGL+ + G +A++SY KA E+
Sbjct: 261 EEAIASYRKAI----EVKPDFADAYFALGLVMKEEGDVEEAIASYRKAIEV--------- 307
Query: 196 RPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLG 255
+P+ + A L+ + GD +EE ++ +++++ A + LG
Sbjct: 308 KPDF---ADAYFALGLVMKEEGD-----------VEEAIASYRKAIEVKPDFADAYFALG 353
Query: 256 LILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDL 308
L++ + G ++ +I+ + V P+ D NLG + G+++++ + L
Sbjct: 354 LVMKEEGDVEEAIASYRKAIEVKPDFADAYLNLGNVLKEEGEIDEARQIITTL 406
>gi|149178854|ref|ZP_01857434.1| hypothetical protein PM8797T_17774 [Planctomyces maris DSM 8797]
gi|148842329|gb|EDL56712.1| hypothetical protein PM8797T_17774 [Planctomyces maris DSM 8797]
Length = 467
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 55/253 (21%), Positives = 97/253 (38%), Gaps = 52/253 (20%)
Query: 157 AHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCL-LPES 215
A+ H+ G++Y L +P +A + E + L H A L LP++
Sbjct: 145 ANFHYQRGMIYLPLNKPQEAAQDFT----------------ETIKLSPDHFAALLALPDA 188
Query: 216 ---SGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLS 272
+G+N E L+ + +Q VV+N + + G+LQ +I+ S
Sbjct: 189 YALAGNN-----------EMALASFNQVIQKQPNSPVVYNNRAMFYQQQGKLQEAINDFS 237
Query: 273 SLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGS 332
+ ++P I N G AY + G + + + + N P +L G
Sbjct: 238 RAIQIEPKYHHAITNRGFAYLEGGKPDTAEADLTQSLSIEPNQP--------FVLGMRGE 289
Query: 333 VLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGK 392
G T A DQ AV + DP+ + ++L +Y+ ++ S+
Sbjct: 290 ARLLQGKIT--EAIADQKKAVQM-----------DPQNPALHSDLGFSYFFNKEYPSALS 336
Query: 393 CLEKAAKLEPNCM 405
+ AA+L P M
Sbjct: 337 EFKLAAQLAPEQM 349
>gi|404253183|ref|ZP_10957151.1| sulfotransferase [Sphingomonas sp. PAMC 26621]
Length = 715
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 75/180 (41%), Gaps = 25/180 (13%)
Query: 148 HVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLS-LVQIH 206
HV P + A L+GLM G A+ +A C+A LS L ++
Sbjct: 36 HVLALWPGQSDALHLMGLMAHAYGNLDIAIDHLRRA------CQAPRVHATYLSNLAEMC 89
Query: 207 HAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQS 266
+ LLPE+ + + D WN LG+IL +SG+L+
Sbjct: 90 RQKGLLPEAE------------------DAARRGVTMDPAMVAGWNNLGIILQESGKLEE 131
Query: 267 SISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL 326
S+S L +LA+ P+ + NLG + G +EQ+ ++ + + A+ N + LL
Sbjct: 132 SLSCLERVLALQPDYPEAHNNLGNTLKRLGRLEQARGQYEAALRLSPAYAEAMSNLSNLL 191
>gi|395762114|ref|ZP_10442783.1| hypothetical protein JPAM2_10234 [Janthinobacterium lividum PAMC
25724]
Length = 892
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 70/160 (43%), Gaps = 13/160 (8%)
Query: 257 ILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHP 316
+L ++ R + +I++ + L ++P N D + NLGIA + G +E + F+ + L ++P
Sbjct: 297 LLRETRRKEPAIAIYQAALLLEPGNIDALNNLGIALQEDGQLEAALASFRQVALLAPDNP 356
Query: 317 AALINYAALL-----------LCKYGSVLA--GAGANTGEGACLDQASAVNVAKECLLAA 363
N AA+L C+ L A+ G CL + ++ A
Sbjct: 357 VTHSNIAAVLNAMGQREAALESCRRAVKLGPKSTAAHVNLGTCLMEMGRLSDAVNSFETV 416
Query: 364 LKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 403
+K DP + NL+ A G + + KA K+ P+
Sbjct: 417 VKLDPHHRRAYVNLSAALTRLGRIDQAIEHCRKALKINPD 456
>gi|289209659|ref|YP_003461725.1| PEP-CTERM system TPR-repeat lipoprotein [Thioalkalivibrio sp.
K90mix]
gi|288945290|gb|ADC72989.1| PEP-CTERM system TPR-repeat lipoprotein [Thioalkalivibrio sp.
K90mix]
Length = 935
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 70/176 (39%), Gaps = 21/176 (11%)
Query: 228 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 287
E+ E+ L + D +N +G LL G + + + L++ P+N N
Sbjct: 463 EQYEQALEATQRLRDKDPENPQGFNLMGAALLGLGEIHEARLIYQEGLSLHPDNSTLALN 522
Query: 288 LGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL 347
L + G++E + + +DL +D HP + I A L + G + AG
Sbjct: 523 LSSLEVRQGNLETAREILEDLQERDPGHPTSAIRLATLHFQQ-GEMEAG----------- 570
Query: 348 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 403
K L A++A P + LA A DH ++ LEKA + PN
Sbjct: 571 ---------KRWLQDAIEAHPDRIEPYLMLARAQNQQEDHAAARSTLEKAREHHPN 617
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 36/70 (51%)
Query: 247 QAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQ 306
Q + +TLG++LL+ G +S++ L + P D +L AY SG+ EQ+
Sbjct: 854 QPAILDTLGVVLLEGGDTESALETLQRAYRMSPQAPDIGFHLAQAYQASGETEQARALLT 913
Query: 307 DLILKDQNHP 316
+L+ ++ P
Sbjct: 914 ELLEAHEDFP 923
>gi|399021040|ref|ZP_10723160.1| Tfp pilus assembly protein PilF [Herbaspirillum sp. CF444]
gi|398093271|gb|EJL83658.1| Tfp pilus assembly protein PilF [Herbaspirillum sp. CF444]
Length = 702
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Query: 251 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 310
WN LG+IL +SG+ +S+ L +++++P+N + NL Y + G EQ+ C++ +
Sbjct: 119 WNNLGIILQESGKFDASLECLQRVVSLEPDNPEPYNNLANTYKRLGQFEQAQDCYRRALA 178
Query: 311 KDQNHPAALINYAALL--LCKYGSVLAGA 337
++ N A LL L ++ +A A
Sbjct: 179 LRPDYAEVHSNLAFLLNDLGRFDEAVASA 207
>gi|406887121|gb|EKD33989.1| hypothetical protein ACD_75C02516G0009 [uncultured bacterium]
Length = 209
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 80/180 (44%), Gaps = 25/180 (13%)
Query: 228 EELEEILSKLKESMQSDTRQ----AVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCD 283
EEL+E L K+ E ++ ++ + ++ LGL+ +K+GR +I L + +D +
Sbjct: 3 EELQEDLPKVIEELEKKCKEHPKSVMAFHHLGLVYMKAGRTAEAIKALEKAIELDNLGSE 62
Query: 284 CIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGE 343
+ NLG YF G+++++ Q+L N A +N + A A+
Sbjct: 63 SMINLGAIYFGQGNLDKA----QEL-----NEQALSVNPES------------AQAHANL 101
Query: 344 GACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 403
G Q S + A+K +P+ A W NL + + G+ + K +L+P+
Sbjct: 102 GLIWQQRSEFEKSIAAYEKAIKQNPQLASAWMNLTSVLTMKGEDARAVLAARKGLELDPD 161
Score = 38.5 bits (88), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 74/167 (44%), Gaps = 21/167 (12%)
Query: 151 RKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQC 210
++ PK+ A LGL+Y + G+ +A+ + EKA E+ ++ +++L I+ Q
Sbjct: 21 KEHPKSVMAFHHLGLVYMKAGRTAEAIKALEKAIEL-----DNLGSESMINLGAIYFGQG 75
Query: 211 LLPESSGDNSLDKELEPE----------------ELEEILSKLKESMQSDTRQAVVWNTL 254
L ++ N + PE E E+ ++ +++++ + + A W L
Sbjct: 76 NLDKAQELNEQALSVNPESAQAHANLGLIWQQRSEFEKSIAAYEKAIKQNPQLASAWMNL 135
Query: 255 GLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQS 301
+L G ++ L +DP++ NL +A + GD ++
Sbjct: 136 TSVLTMKGEDARAVLAARKGLELDPDSPLGHNNLAVALYFCGDFSEA 182
>gi|220918109|ref|YP_002493413.1| hypothetical protein A2cp1_3012 [Anaeromyxobacter dehalogenans
2CP-1]
gi|219955963|gb|ACL66347.1| Tetratricopeptide TPR_2 repeat protein [Anaeromyxobacter
dehalogenans 2CP-1]
Length = 254
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 67/156 (42%), Gaps = 23/156 (14%)
Query: 151 RKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQC 210
R P + L G++Y+ G +A + +A LR E +A H A
Sbjct: 55 RGAPGRPEGYLLRGIVYREQGLQAEAEADLREA----LRLERKLA--------AAHSALA 102
Query: 211 LLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISV 270
+L ++ G ++ +E +++ + + R A N +G L GR + +I V
Sbjct: 103 ILYDTQGRSAEAQEHH-----------RQAAELEPRNAGYLNNVGFSLFAHGRAREAIPV 151
Query: 271 LSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQ 306
L L P + NLG AY SGD+ ++A+ F+
Sbjct: 152 LHEALRAAPADARIRNNLGFAYAASGDLSRAAEQFE 187
>gi|198422560|ref|XP_002123334.1| PREDICTED: similar to tetratricopeptide repeat domain 8 isoform 2
[Ciona intestinalis]
Length = 509
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 53/253 (20%), Positives = 101/253 (39%), Gaps = 42/253 (16%)
Query: 161 FLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESSGDNS 220
LLG +YQR+ QPL+++++Y++ E + D R L+++ ++H
Sbjct: 257 LLLGKVYQRMDQPLQSIATYKQGLE---KFPDD--RSLLVAIARVHD------------- 298
Query: 221 LDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPN 280
E +L++ K+ +++D ++ + + + SI + LL + +
Sbjct: 299 -----EMGQLDDATKWYKDVLETDGVNVEAIASIAANYFYTDQPEISIRLYRRLLQMGIH 353
Query: 281 NCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGAN 340
N + NLG+ + + + + CF + ++ + Y V G G N
Sbjct: 354 NVELFNNLGLCCYFAQQYDMTMNCFDRALSLAEDEQLGDVWY------NISHVALGIGDN 407
Query: 341 TGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKL 400
N+A +CL A+ AD + NLA GD + L AA+L
Sbjct: 408 -------------NLAYQCLRLAIAADNGHTEAYNNLAVLELRRGDVERAKSLLRSAAEL 454
Query: 401 EPNCMSTRYAVAV 413
P+ Y +A
Sbjct: 455 APHAYEHHYNLAT 467
>gi|357142312|ref|XP_003572530.1| PREDICTED: probable UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase SEC-like [Brachypodium
distachyon]
Length = 1001
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 84/202 (41%), Gaps = 14/202 (6%)
Query: 231 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 290
++ + + ++Q+ A+ + L I + G+L ++ + + DP + N+G
Sbjct: 298 QDAIMSYQRALQARPDYAMAYGNLATIYYEQGQLDMAVRCYNQAIVCDPQFIEAYNNMGN 357
Query: 291 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAAL-----LLCKYGSVL-AGAGANTGEG 344
A SG +E++ C++ + NHP AL N + L+ S A +G
Sbjct: 358 ALKDSGRVEEAINCYRSCLALQANHPQALTNLGNIYMEWNLVTTAASFYKAAISVTSGLS 417
Query: 345 ACLDQASAV-----NVAK--ECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKA 397
+ L+ + + N A C L+ DP AA N N + G + + +A
Sbjct: 418 SPLNNLALIYKQQGNYADAITCYTEVLRIDPTAADALVNRGNTFKEIGRVNEAIQDYVQA 477
Query: 398 AKLEPNCMSTRYAVAVSRIKDA 419
A + P M+ +A S KD+
Sbjct: 478 ATIRPT-MAEAHANLASAYKDS 498
Score = 45.8 bits (107), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 64/174 (36%), Gaps = 37/174 (21%)
Query: 254 LGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQ 313
LG I + I LA+DP +C GN+ A+ + GD++ + + + I
Sbjct: 117 LGAIYYQIRNYDMCIEKNEEALAIDPQFAECYGNMANAWKEKGDVDLAIRYYLTAIQLRS 176
Query: 314 NHPAALINYAALLLCKYGSVLAGAGANTGE----GACLDQASAVNV-------------- 355
N C S LA A G C QA A+N
Sbjct: 177 N------------FCDAWSNLASAYTRKGRLNDAAQCCRQALAINPRLVDAHSNLGNLMK 224
Query: 356 -------AKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 402
A C + AL DP+ A W+NLA + GD + ++A KL+P
Sbjct: 225 SQGFIQEAYSCYIEALHIDPRFAIAWSNLAGLFMEAGDLDKALLYYKEAIKLKP 278
Score = 43.1 bits (100), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 71/187 (37%), Gaps = 14/187 (7%)
Query: 251 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 310
W+ L + GRL + LA++P D NLG G ++++ C+ + +
Sbjct: 182 WSNLASAYTRKGRLNDAAQCCRQALAINPRLVDAHSNLGNLMKSQGFIQEAYSCYIEALH 241
Query: 311 KDQNHPAALINYAALL---------LCKYGSVL----AGAGANTGEGACLDQASAVNVAK 357
D A N A L L Y + + A A+ +G A
Sbjct: 242 IDPRFAIAWSNLAGLFMEAGDLDKALLYYKEAIKLKPSFADAHLNQGNVYKAMGKPQDAI 301
Query: 358 ECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIK 417
AL+A P A + NLA YY G + +C +A +P + Y + +K
Sbjct: 302 MSYQRALQARPDYAMAYGNLATIYYEQGQLDMAVRCYNQAIVCDPQFIEA-YNNMGNALK 360
Query: 418 DAERSQE 424
D+ R +E
Sbjct: 361 DSGRVEE 367
Score = 43.1 bits (100), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 59/288 (20%), Positives = 105/288 (36%), Gaps = 86/288 (29%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELL----SLVQIHHAQ 209
P A AH G +Y+ +G+P A+ SY++A + ARP+ +L I++ Q
Sbjct: 278 PSFADAHLNQGNVYKAMGKPQDAIMSYQRALQ---------ARPDYAMAYGNLATIYYEQ 328
Query: 210 CLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSIS 269
+L+ + +++ D + +N +G L SGR++ +I+
Sbjct: 329 ------------------GQLDMAVRCYNQAIVCDPQFIEAYNNMGNALKDSGRVEEAIN 370
Query: 270 VLSSLLAVDPNNCDCIGNLG----------------------------------IAYFQS 295
S LA+ N+ + NLG + Y Q
Sbjct: 371 CYRSCLALQANHPQALTNLGNIYMEWNLVTTAASFYKAAISVTSGLSSPLNNLALIYKQQ 430
Query: 296 GDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNV 355
G+ + C+ +++ D AL+N G + VN
Sbjct: 431 GNYADAITCYTEVLRIDPTAADALVN---------------------RGNTFKEIGRVNE 469
Query: 356 AKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 403
A + + A P A ANLA+AY +G ++ ++A L P+
Sbjct: 470 AIQDYVQAATIRPTMAEAHANLASAYKDSGHVETAIVSYKQALHLRPD 517
>gi|115380381|ref|ZP_01467379.1| tetratricopeptide repeat family [Stigmatella aurantiaca DW4/3-1]
gi|310822651|ref|YP_003955009.1| tpr domain-containing protein [Stigmatella aurantiaca DW4/3-1]
gi|115362616|gb|EAU61853.1| tetratricopeptide repeat family [Stigmatella aurantiaca DW4/3-1]
gi|309395723|gb|ADO73182.1| TPR domain protein [Stigmatella aurantiaca DW4/3-1]
Length = 622
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 69/155 (44%), Gaps = 22/155 (14%)
Query: 250 VWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQS-AKCFQDL 308
++ L + GR + VL LA P + + LG+AY Q G ++Q+ A+ L
Sbjct: 427 LYEALATTRQRQGRPAEGVEVLREALAQHPRDEALLYALGVAYEQQGQVDQALAQMRAVL 486
Query: 309 ILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADP 368
++ N PA +N+ +L +G +A A+ +L AL P
Sbjct: 487 LVNPSNAPA--LNFLGYMLVLHGRDIAE-------------------AERLVLRALALRP 525
Query: 369 KAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 403
+ +L Y+ +++ + + LE+A++LEP+
Sbjct: 526 ETGAFLDSLGWIYFRRKEYQRAVETLERASQLEPD 560
>gi|427722289|ref|YP_007069566.1| hypothetical protein Lepto7376_0290 [Leptolyngbya sp. PCC 7376]
gi|427354009|gb|AFY36732.1| Tetratricopeptide TPR_1 repeat-containing protein [Leptolyngbya sp.
PCC 7376]
Length = 305
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 75/180 (41%), Gaps = 40/180 (22%)
Query: 253 TLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKD 312
T GL ++ G++ +I + + +A+DP NLG+AY Q+GD++++A F ++
Sbjct: 57 TQGLQRIQQGQVAQAIQLFNEAIALDPELWQAHYNLGLAYRQAGDLQKAADAFYQTVVIQ 116
Query: 313 QNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAH 372
N AL G +L + L+QA AV DP
Sbjct: 117 PNF--------ALGFASIGGILLDVQNWSQAQQYLEQAIAV-------------DP---- 151
Query: 373 IWANLANAYYLTG-DHRSSGK------CLEKAAKLEPNCMSTRYAVAVS-----RIKDAE 420
NLA A+Y G HR G+ E A +L PN +A + RIK AE
Sbjct: 152 ---NLAIAHYNFGLLHRQFGRTAAAIQAWETANQLAPNLTEAAIQLAEAYLDGDRIKQAE 208
>gi|268315734|ref|YP_003289453.1| hypothetical protein Rmar_0157 [Rhodothermus marinus DSM 4252]
gi|262333268|gb|ACY47065.1| TPR repeat-containing protein [Rhodothermus marinus DSM 4252]
Length = 465
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 71/185 (38%), Gaps = 21/185 (11%)
Query: 230 LEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLG 289
EE L + ++Q D ++ LG+ L + RL+ ++ L ++P++ + LG
Sbjct: 122 FEEALQAYERALQIDPLNDEIYYNLGITLERMDRLEEAVQALEEAARLNPDHPEVWYELG 181
Query: 290 IAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQ 349
Y + GD E+S C+ + D A N G L++
Sbjct: 182 FCYDRLGDDERSLACYDRHLELDPYSADAWYN---------------------RGIVLNR 220
Query: 350 ASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRY 409
A E A+ W N NA GD R + + EK ++E +T Y
Sbjct: 221 MGRYREAVESYDYAIAIQEDFGSAWYNRGNALTNLGDLRGAIESYEKVLEIEGGDPATYY 280
Query: 410 AVAVS 414
+A++
Sbjct: 281 NIALA 285
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 81/213 (38%), Gaps = 18/213 (8%)
Query: 228 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 287
+ LEE + L+E+ + + VW LG + G + S++ L +DP + D N
Sbjct: 154 DRLEEAVQALEEAARLNPDHPEVWYELGFCYDRLGDDERSLACYDRHLELDPYSADAWYN 213
Query: 288 LGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL---------LCKYGSVLAGAG 338
GI + G ++ + + I ++ +A N L + Y VL G
Sbjct: 214 RGIVLNRMGRYREAVESYDYAIAIQEDFGSAWYNRGNALTNLGDLRGAIESYEKVLEIEG 273
Query: 339 ANTGE----GACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCL 394
+ ++ A + AL+ DP A W L Y + C+
Sbjct: 274 GDPATYYNIALAYEELQEYETAIQYFQLALEEDPAYAEAWYGLGCCYDALERFEEAIACM 333
Query: 395 EKAAKLEPNCMSTRYAVA-----VSRIKDAERS 422
E+A L+P YA A R++DA +S
Sbjct: 334 ERAVTLQPETSEFWYAKADCEYNARRLQDALQS 366
Score = 46.6 bits (109), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 69/351 (19%), Positives = 126/351 (35%), Gaps = 39/351 (11%)
Query: 217 GDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLA 276
G + D L+P +E++++ + S + + + GR + ++ V+ LLA
Sbjct: 7 GFDDADDALDPSHIEQLVAAYEAQGSSAYFDSDTLEEIATYYYERGRFEDALGVIDRLLA 66
Query: 277 VDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL---------L 327
+ P D GI G E++ + ++ + + L+N L L
Sbjct: 67 LHPTASDAWMRRGILLSHLGRHEEALQAYERALSLNPTDTETLVNLGITLDNLGRFEEAL 126
Query: 328 CKYGSVLAGAGAN----TGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYL 383
Y L N G L++ + A + L A + +P +W L Y
Sbjct: 127 QAYERALQIDPLNDEIYYNLGITLERMDRLEEAVQALEEAARLNPDHPEVWYELGFCYDR 186
Query: 384 TGDHRSSGKCLEKAAKLEPNCMSTRY--AVAVSRIKDAERSQEPTEQLSWAGNEMASILR 441
GD S C ++ +L+P Y + ++R+ R +E E +A
Sbjct: 187 LGDDERSLACYDRHLELDPYSADAWYNRGIVLNRMG---RYREAVESYDYAI-------- 235
Query: 442 EGDPVQIEPPIAWAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNV 501
+Q + AW ++ A E+ E K+ E G + + + A A
Sbjct: 236 ---AIQEDFGSAWYNRGNALTNLGDLRGAIESYE----KVLEIEGGDPATYYNIALAYEE 288
Query: 502 AKECLLA------ALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKVLMV 546
+E A AL+ DP A W L Y + C+E+ + +
Sbjct: 289 LQEYETAIQYFQLALEEDPAYAEAWYGLGCCYDALERFEEAIACMERAVTL 339
Score = 39.3 bits (90), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 52/263 (19%), Positives = 99/263 (37%), Gaps = 36/263 (13%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 213
P N ++ LG+ +R+ + +AV + E+A R D PE + +
Sbjct: 137 PLNDEIYYNLGITLERMDRLEEAVQALEEAA----RLNPD--HPE------VWYELGFCY 184
Query: 214 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 273
+ GD+ E L+ ++ D A W G++L + GR + ++
Sbjct: 185 DRLGDD-----------ERSLACYDRHLELDPYSADAWYNRGIVLNRMGRYREAVESYDY 233
Query: 274 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL--LCKYG 331
+A+ + N G A GD+ + + ++ ++ + PA N A L +Y
Sbjct: 234 AIAIQEDFGSAWYNRGNALTNLGDLRGAIESYEKVLEIEGGDPATYYNIALAYEELQEYE 293
Query: 332 SVL-----------AGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANA 380
+ + A A A G G C D A C+ A+ P+ + W A+
Sbjct: 294 TAIQYFQLALEEDPAYAEAWYGLGCCYDALERFEEAIACMERAVTLQPETSEFWYAKADC 353
Query: 381 YYLTGDHRSSGKCLEKAAKLEPN 403
Y + + + + +L+P
Sbjct: 354 EYNARRLQDALQSYRRVIELDPQ 376
>gi|227820344|ref|YP_002824315.1| TonB-dependent receptor [Sinorhizobium fredii NGR234]
gi|227339343|gb|ACP23562.1| putative exported protein, TonB-dependent receptor protein
[Sinorhizobium fredii NGR234]
Length = 1198
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 71/175 (40%), Gaps = 21/175 (12%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
+LE L+ L+ ++++ +WN +G++ G +++ + +DP + + NL
Sbjct: 423 DLEGALADLQRALETAPGSPTIWNAIGIVQGDRGDNRAAERAFKKAIELDPADPNYHANL 482
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLD 348
I Y + ++ + + D + L+ G
Sbjct: 483 AIQYLGELRVAEAKREIDAALAVDPSFDIVLV---------------------ARGWYQL 521
Query: 349 QASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 403
Q V A E LLA A+P A LA AYY GDH + + L+ A +L+PN
Sbjct: 522 QNGDVEKAVEDLLAGSTANPAFAGAQMLLAAAYYEKGDHGPAAQALDSADRLDPN 576
>gi|428305189|ref|YP_007142014.1| hypothetical protein Cri9333_1614 [Crinalium epipsammum PCC 9333]
gi|428246724|gb|AFZ12504.1| Tetratricopeptide TPR_2 repeat-containing protein [Crinalium
epipsammum PCC 9333]
Length = 423
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 109/280 (38%), Gaps = 36/280 (12%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 213
P A AH+LLG +G AV+ Y LV I+ Q LP
Sbjct: 88 PSLAMAHYLLGNSLAEVGDFSGAVNEY---------------------LVTIN-LQPSLP 125
Query: 214 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 273
E +N++ + L+E +++ + ++ + + LGLIL G+ ++I+
Sbjct: 126 EVYYNNAVALS-KLGRLDEAINQYQYALSFNPSLVDAYYNLGLILEAQGKTDAAIAQYQQ 184
Query: 274 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCK---- 329
+ ++PN NLG+ Y + E + FQ + D + A LL +
Sbjct: 185 AIRINPNYAAAQYNLGLLYLKQEQTEPAIAAFQQAVKSDPSFAPAHYQLGLLLALRNDLD 244
Query: 330 ---------YGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANA 380
G A A G G Q A L A+K DPK + + L
Sbjct: 245 AAKTSLNKAVGLNQGLAQAQYGLGVVHAQQGDYKAAIGRLEQAIKQDPKNVNAYQQLGTV 304
Query: 381 YYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAE 420
G+++++ ++A +L + T Y +AV+ +D +
Sbjct: 305 LTQRGNYKAAIATFKQAIRLSSDDALTHYNLAVALHRDKQ 344
>gi|332800529|ref|YP_004462028.1| hypothetical protein TepRe1_2623 [Tepidanaerobacter acetatoxydans
Re1]
gi|332698264|gb|AEE92721.1| Tetratricopeptide TPR_1 repeat-containing protein
[Tepidanaerobacter acetatoxydans Re1]
Length = 175
Score = 48.1 bits (113), Expect = 0.011, Method: Composition-based stats.
Identities = 26/107 (24%), Positives = 49/107 (45%)
Query: 219 NSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVD 278
N + +E E ++ E + D A+ +N LG+I ++ L+ + L ++
Sbjct: 6 NKAEHHMERGEYQQARKIYNEILLIDPNNAIAYNKLGVISVREENLEQAKIYFIKALELN 65
Query: 279 PNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAAL 325
P NLG YF+ G+ E++ C++ I D ++P N A +
Sbjct: 66 PKLSSASSNLGNIYFEKGNFEKAKDCYEKAIAIDPDNPVPYNNLAVI 112
>gi|443327009|ref|ZP_21055645.1| amino acid adenylation enzyme/thioester reductase family protein
[Xenococcus sp. PCC 7305]
gi|442793374|gb|ELS02825.1| amino acid adenylation enzyme/thioester reductase family protein
[Xenococcus sp. PCC 7305]
Length = 1731
Score = 48.1 bits (113), Expect = 0.011, Method: Composition-based stats.
Identities = 43/204 (21%), Positives = 88/204 (43%), Gaps = 23/204 (11%)
Query: 222 DKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNN 281
+ + + E L + +++++ + + + + LG +L + GR++ +I++L+ + ++PNN
Sbjct: 1517 EAQTKQENLTAAAASYQQAVELEPQHSWFYQKLGQVLQRLGRIEKAITILTERIKLEPNN 1576
Query: 282 CDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANT 341
C+ L A GD + + DQ IN A + C+ G G T
Sbjct: 1577 CNAYSQLASAQISKGDFKGAISNL------DQALKLLPIN-PAKIYCQLGHAYHKQGVVT 1629
Query: 342 GEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKL- 400
E C C A+ +P ++ L NA +G +++ E+A +L
Sbjct: 1630 -EAIC------------CYQKAITLNPSHPAVYTFLGNAQLKSGKFQNAVVSYEQAIQLN 1676
Query: 401 --EPNCMSTRYAVAVSRIKDAERS 422
+P + A+S+ D E++
Sbjct: 1677 SQQPFGVYKNLGDALSKEGDLEKA 1700
>gi|260771469|ref|ZP_05880394.1| TPR repeat protein [Vibrio furnissii CIP 102972]
gi|260613595|gb|EEX38789.1| TPR repeat protein [Vibrio furnissii CIP 102972]
Length = 352
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 72/148 (48%), Gaps = 10/148 (6%)
Query: 253 TLGLILLKSGRLQSSISVLSSLLAVD--PNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 310
T+G I G L+ +S + LLA+D PNN + LG Y + GD+EQ F I
Sbjct: 90 TIGRIHQSRGNLE--LSEKAYLLALDANPNNIKVLQQLGSNYTKQGDVEQGESYFIRAIN 147
Query: 311 KDQNHPAAL----INYAALLLCKYGSV--LAGAGANTGEGACLDQASAVNVAKECLLAAL 364
DQ A+ +N ++ + S + A A G G D + +VAK AL
Sbjct: 148 ADQLRLASREKLALNSVSITAIEQLSSDNQSPALAYMGLGILYDMKAKHHVAKAFYQHAL 207
Query: 365 KADPKAAHIWANLANAYYLTGDHRSSGK 392
K +PK++ N+ +YY++G++ ++ +
Sbjct: 208 KIEPKSSKALMNMGYSYYMSGEYDNAKR 235
>gi|149183670|ref|ZP_01862084.1| TPR domain protein [Bacillus sp. SG-1]
gi|148848618|gb|EDL62854.1| TPR domain protein [Bacillus sp. SG-1]
Length = 221
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 85/201 (42%), Gaps = 14/201 (6%)
Query: 225 LEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDC 284
L+ ++EE + E+++ + V + G +LL G + + L +++D
Sbjct: 11 LQEGKVEEAVKFFTEAIEENPTDPVAYINFGNVLLSVGENEKAEKFLKRAISLDGEAASA 70
Query: 285 IGNLGIAYFQSGDMEQSAKCFQDLILKDQNHP-------AALINYA----ALLLCKYGSV 333
+LG YF + + + + + F+ I K + +L+N AL
Sbjct: 71 YYSLGNLYFNAENFDAAKEAFETAIKKGLENEDVFFMLGISLVNLELPKLALPYLMRSVE 130
Query: 334 LAG--AGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYY-LTGDHRSS 390
L G A A G CL + A A E L ++ DP+ A + NL AY T D +
Sbjct: 131 LNGEDAEARFQYGLCLAKTEAYKEAIEQLEIVVEQDPEHADAYYNLGVAYAGFTDDADKA 190
Query: 391 GKCLEKAAKLEPNCMSTRYAV 411
C EKA +++P+ M Y +
Sbjct: 191 RSCFEKALEIQPDHMLAGYGL 211
>gi|386392026|ref|ZP_10076807.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Desulfovibrio sp. U5L]
gi|385732904|gb|EIG53102.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Desulfovibrio sp. U5L]
Length = 741
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 78/198 (39%), Gaps = 28/198 (14%)
Query: 228 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 287
++ + L + ES + W+ LGL L+ G +++ L +A PN+ D +
Sbjct: 146 DQAKRFLERFPESGKG-------WHLLGLSLVARGDGAAALEPLLRAVATLPNDVDLWDH 198
Query: 288 LGIAYFQSGDMEQSAKCFQDLILKDQNHPA-----------------ALINYAALLLCKY 330
LG AY G E++A F+ + ++P+ A+ +Y L C+
Sbjct: 199 LGSAYLHQGQPERAAHAFRRALALRPDYPSAHNNLGNALRELGQPQEAMASYRQALRCQP 258
Query: 331 GSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSS 390
+ A+T G L V A EC AL P N ANA G ++
Sbjct: 259 NHAM----AHTNLGIMLQSQGQVQAALECHARALALAPANVEAHVNSANALKELGRIEAA 314
Query: 391 GKCLEKAAKLEPNCMSTR 408
+A L+P+ + R
Sbjct: 315 VAAYGRALALDPDRLEAR 332
>gi|444915193|ref|ZP_21235329.1| Tetratricopeptide repeat family [Cystobacter fuscus DSM 2262]
gi|444713775|gb|ELW54667.1| Tetratricopeptide repeat family [Cystobacter fuscus DSM 2262]
Length = 477
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 86/203 (42%), Gaps = 25/203 (12%)
Query: 145 GLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIAR-PELLSLV 203
G V + P++ +A F LG++ +R G+ A ++YEK + D P LL+L
Sbjct: 96 GFQEVLHRAPQSLNAQFNLGVIAERQGRLADAQAAYEKVRFL------DAGHVPTLLNLG 149
Query: 204 QIHHAQCLLPES-----SGDNSLDKELEPEELE------EILSKLKESMQSDTR------ 246
+++ Q E+ +G + ++ EP L + KL ++ + R
Sbjct: 150 RLYRMQGKFAEAISLYEAGLKTPGRDTEPALLNNLSVAYRLAGKLPQAEATSRRVLSRHP 209
Query: 247 -QAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCF 305
A + L L+ + GR + + +VL + + + NLG+ Y + D ++ F
Sbjct: 210 DDAEAYKNLALVYYEQGRYRLAETVLVNARKLAEKDPGISNNLGMVYLKLEDRPRALAQF 269
Query: 306 QDLILKDQNHPAALINYAALLLC 328
Q + D+ +N AL L
Sbjct: 270 QKAVSLDERFAPGYVNLGALALA 292
>gi|374289602|ref|YP_005036687.1| hypothetical protein BMS_2965 [Bacteriovorax marinus SJ]
gi|301168143|emb|CBW27731.1| conserved hypothetical protein [Bacteriovorax marinus SJ]
Length = 283
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 47/86 (54%)
Query: 224 ELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCD 283
+L ++ E L LK++ + D + + N LG+ G+ +++ L L +D N D
Sbjct: 44 KLLQKDYREALKYLKQAYEIDPKDTKILNNLGMSYYFLGQTKTAFKYLEESLDIDSKNSD 103
Query: 284 CIGNLGIAYFQSGDMEQSAKCFQDLI 309
+ N+G YF++ + ++S K +Q+++
Sbjct: 104 ALNNIGSLYFKNKEYDKSLKSYQEVL 129
>gi|317154775|ref|YP_004122823.1| tetratricopeptide domain-containing protein [Desulfovibrio
aespoeensis Aspo-2]
gi|316945026|gb|ADU64077.1| Tetratricopeptide TPR_1 repeat-containing protein [Desulfovibrio
aespoeensis Aspo-2]
Length = 443
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Query: 227 PEELEEILSKLKESM-QSDTRQAV-VWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDC 284
PE E+ L K+ E+ QS + + ++N LG+ L G+ + +I S LA+ P++
Sbjct: 303 PEMSEKYLLKVIETKGQSLNKDDIALFNKLGIALRGQGKWREAIDNYSRALAISPDDEGL 362
Query: 285 IGNLGIAYFQSGDMEQSAKCF 305
N+G+AYF GD +A+CF
Sbjct: 363 HYNMGMAYFDGGDKRMAARCF 383
>gi|438003936|ref|YP_007273679.1| TPR repeat:Sel1-like repeat [Tepidanaerobacter acetatoxydans Re1]
gi|432180730|emb|CCP27703.1| TPR repeat:Sel1-like repeat [Tepidanaerobacter acetatoxydans Re1]
Length = 173
Score = 48.1 bits (113), Expect = 0.011, Method: Composition-based stats.
Identities = 26/107 (24%), Positives = 49/107 (45%)
Query: 219 NSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVD 278
N + +E E ++ E + D A+ +N LG+I ++ L+ + L ++
Sbjct: 6 NKAEHHMERGEYQQARKIYNEILLIDPNNAIAYNKLGVISVREENLEQAKIYFIKALELN 65
Query: 279 PNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAAL 325
P NLG YF+ G+ E++ C++ I D ++P N A +
Sbjct: 66 PKLSSASSNLGNIYFEKGNFEKAKDCYEKAIAIDPDNPVPYNNLAVI 112
>gi|118395435|ref|XP_001030067.1| SLEI family protein [Tetrahymena thermophila]
gi|89284355|gb|EAR82404.1| SLEI family protein [Tetrahymena thermophila SB210]
Length = 2406
Score = 48.1 bits (113), Expect = 0.011, Method: Composition-based stats.
Identities = 54/251 (21%), Positives = 102/251 (40%), Gaps = 40/251 (15%)
Query: 153 MPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLL 212
+PK A H+ LG +YQ +A+ SY+ A E+ + + +Q+
Sbjct: 1696 VPKCAETHYHLGRVYQDQNMLDEAIGSYQNAIEL--------DSKYIDAYIQL------- 1740
Query: 213 PESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLS 272
G+ LDK + ++ L K+ ++ D ++ V +N +GL+ ++ +
Sbjct: 1741 ----GNAYLDKPM----FDQALETYKKILEIDPQKPVAYNNIGLVYFDQNMNDEALEQFN 1792
Query: 273 SLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGS 332
L ++P + N G+AY + E++ +C+ ++ + +L ALL S
Sbjct: 1793 KALEINPKYELSLYNSGLAYERKNQTEKALECYNKVLEINPTESRSLARKIALLKKNNSS 1852
Query: 333 VLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGK 392
NTG D + + A N A YY+ + S +
Sbjct: 1853 -------NTGFDFLKDLQDKFGPSYK----------STAEEKFNQAFHYYMQMEDDKSIE 1895
Query: 393 CLEKAAKLEPN 403
CL+KA +++PN
Sbjct: 1896 CLKKAIEIDPN 1906
Score = 45.4 bits (106), Expect = 0.071, Method: Composition-based stats.
Identities = 38/189 (20%), Positives = 84/189 (44%), Gaps = 21/189 (11%)
Query: 225 LEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDC 284
L+ + +EE + L+++++ D + A LG K +I L + +DPN +
Sbjct: 83 LQKKMIEEAVVCLQKALEIDPKSAKAHERLGFAYKKQNLTDKAIDCLKKAIEIDPNFTEA 142
Query: 285 IGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEG 344
NLG Y ++Q+ C+++++ D N+ A I+ A +Y + E
Sbjct: 143 HHNLGFTYESKKMIDQAYDCYKNILNIDPNYVKAYISLARNYYIEYKT----------ED 192
Query: 345 ACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNC 404
+ A+ + + C ++A + +I+ N++ S K +KA +++PN
Sbjct: 193 SIKYLKKAIEMDQNC----VEAYERLGYIYQNISK-------KEESIKYFKKAIEIDPNY 241
Query: 405 MSTRYAVAV 413
+ ++ + +
Sbjct: 242 FNAQFNLGL 250
Score = 44.7 bits (104), Expect = 0.14, Method: Composition-based stats.
Identities = 39/173 (22%), Positives = 68/173 (39%), Gaps = 25/173 (14%)
Query: 231 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 290
+E + LK++++ D + + ++ LGL+ ++ + + +I + PNN DCI L
Sbjct: 2174 QECIKCLKKAIEIDPKYSEAYDKLGLVYEENEQFEEAIECYKKAIEHKPNNLDCISALMT 2233
Query: 291 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQA 350
Y M AK F Y SV A G +
Sbjct: 2234 IYINQ-KMTDEAKEF------------------------YNSVSQSADIYYELGRVYEDK 2268
Query: 351 SAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 403
S V+ A A++ DPK + + L N Y + + + +K ++EPN
Sbjct: 2269 SMVDEAISSHKKAIELDPKYVNSYIQLGNIYSEKASYEQAIEYFQKILEIEPN 2321
Score = 43.5 bits (101), Expect = 0.25, Method: Composition-based stats.
Identities = 43/187 (22%), Positives = 82/187 (43%), Gaps = 27/187 (14%)
Query: 217 GDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLA 276
G+ LDK L + +E ++ ++ D+ ++V +N +GLI L+ L ++ + +
Sbjct: 1475 GNAYLDKPLYDQAME----CYQKIIEIDSTKSVAYNNIGLIYLRQNMLDEALEQFNKAIE 1530
Query: 277 VDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAG 336
+DP I N G+ Y + +++ +C+ + + +PA +Y + SVL
Sbjct: 1531 IDPKYVLSIYNSGLVYEKKQQKDKALECYNKAL---EINPAHKNSYNRI------SVLKK 1581
Query: 337 AGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEK 396
+G E +Q +N+ + A + YY + S KCL K
Sbjct: 1582 SGKQAQETDKEEQ-QEINL-------------QTAKDYYEEGYKYYTELNDDESIKCLNK 1627
Query: 397 AAKLEPN 403
A +L+PN
Sbjct: 1628 AIELDPN 1634
Score = 41.2 bits (95), Expect = 1.6, Method: Composition-based stats.
Identities = 65/318 (20%), Positives = 125/318 (39%), Gaps = 20/318 (6%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
E ++ L ++ +Q + ++AV +N +GL+ K +I + L +DPN N
Sbjct: 2021 EYDQALECYQKIIQINPQKAVAYNNIGLVHYKQKMDDKAIEYYNKALELDPNYDLSYYNS 2080
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLD 348
G+ Y Q D +++ +C++ +L+ +N L+ G + A EG+ +
Sbjct: 2081 GLVYEQKKDFDKALECYKK-VLQINPKDKKTLNRINLIKKNNGDKIDNQ-AQEDEGSEPE 2138
Query: 349 QASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTR 408
+ K D + A + N YY + KCL+KA +++P +
Sbjct: 2139 DYDDDYEDGD----EQKKDLQTAEDYYNQGFKYYNQMKDQECIKCLKKAIEIDP-----K 2189
Query: 409 YAVAVSRIKDAERSQEPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFAAVQKTHHEVA 468
Y+ A ++ E E+ E E P ++ A QK E
Sbjct: 2190 YSEAYDKLGLVYEENEQFEE----AIECYKKAIEHKPNNLDCISALMTIYINQKMTDEAK 2245
Query: 469 AAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKADPKAAHIWANLANAYY 528
+ N +S+ + + D+ S V+ A A++ DPK + + L N Y
Sbjct: 2246 EFY----NSVSQSADIYYELGRVYEDK-SMVDEAISSHKKAIELDPKYVNSYIQLGNIYS 2300
Query: 529 LTGDHRSSGKCLEKVLMV 546
+ + + +K+L +
Sbjct: 2301 EKASYEQAIEYFQKILEI 2318
Score = 40.8 bits (94), Expect = 1.9, Method: Composition-based stats.
Identities = 59/278 (21%), Positives = 105/278 (37%), Gaps = 42/278 (15%)
Query: 153 MPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLL 212
+PK A++ LG Y+ A+ +Y+KA +Q+ +
Sbjct: 1156 VPKCTEAYYELGRTYEEQNMLDDAIVNYKKA-------------------IQLDPSHINS 1196
Query: 213 PESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLS 272
G++ LDK + + L K+ ++ D ++AV +N +G++ K G +++
Sbjct: 1197 YIYLGNSYLDKL----QFDLALDSYKKIIEIDPKKAVAYNNVGVVYNKQGLYDAALEYYK 1252
Query: 273 SLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGS 332
L VDP+ + N G+ Y + G+ +++ + F + + +L + K S
Sbjct: 1253 KALDVDPHYELALFNSGLVYEKKGEQDKALEFFYKTLEINPTEKKSLNRIKVIQQNKQTS 1312
Query: 333 -------------------VLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHI 373
VL+ A EG Q + A ECL AL+ DP
Sbjct: 1313 KDDKEFSLFKDLFKNDKKKVLSTADDYYYEGLVYYQQQNDDKAIECLKKALELDPNFYEA 1372
Query: 374 WANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAV 411
+ L Y + S +KA +L P S V
Sbjct: 1373 YDKLGLVYKVKKMFDESIIHYKKALELNPKFYSAMETV 1410
Score = 40.8 bits (94), Expect = 2.0, Method: Composition-based stats.
Identities = 42/184 (22%), Positives = 81/184 (44%), Gaps = 25/184 (13%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELL----SLVQIHHAQ 209
PK + A+ LGL+Y+ Q +A+ Y+KA E +P L +L+ I+ Q
Sbjct: 2188 PKYSEAYDKLGLVYEENEQFEEAIECYKKAIE---------HKPNNLDCISALMTIYINQ 2238
Query: 210 CLLPES-----SGDNSLDKELE-------PEELEEILSKLKESMQSDTRQAVVWNTLGLI 257
+ E+ S S D E ++E +S K++++ D + + LG I
Sbjct: 2239 KMTDEAKEFYNSVSQSADIYYELGRVYEDKSMVDEAISSHKKAIELDPKYVNSYIQLGNI 2298
Query: 258 LLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPA 317
+ + +I +L ++PNN N+G+ Y+ G +Q+ + + + + +
Sbjct: 2299 YSEKASYEQAIEYFQKILEIEPNNEIAYNNIGLIYYDQGKYDQALEQYNKALEINPKYEL 2358
Query: 318 ALIN 321
+L N
Sbjct: 2359 SLYN 2362
Score = 40.4 bits (93), Expect = 2.6, Method: Composition-based stats.
Identities = 55/250 (22%), Positives = 95/250 (38%), Gaps = 55/250 (22%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 213
PK A LGL+ Q + Q +A+ Y A E+ +C +P L L I+ A+
Sbjct: 643 PKYTQAFCNLGLLNQAIKQMEEAIRFYLAAIELDPKC----LKP-YLGLGSIYSAK---- 693
Query: 214 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 273
G N E+ L ++ + D A +N++G + L ++ L
Sbjct: 694 ---GIN-----------EKALECFSKAQEIDANNAETFNSIGFMYYNWKILDQALDNLKK 739
Query: 274 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSV 333
L ++PN I N G+ Y Q +++ +C+Q ++ N A +
Sbjct: 740 ALEINPNYELAIYNTGLVYEQKKQNDKALECYQKVLQIKPNDKKAKVR------------ 787
Query: 334 LAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKC 393
+ Q + N ++ PK A + YY+ S +C
Sbjct: 788 -------------IFQINQKNQQED-------KTPKTAKEFYQQGYKYYIQLKDEQSIEC 827
Query: 394 LEKAAKLEPN 403
L+KA +L+PN
Sbjct: 828 LQKALELDPN 837
>gi|333987314|ref|YP_004519921.1| hypothetical protein MSWAN_1100 [Methanobacterium sp. SWAN-1]
gi|333825458|gb|AEG18120.1| Tetratricopeptide TPR_1 repeat-containing protein [Methanobacterium
sp. SWAN-1]
Length = 197
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 65/166 (39%), Gaps = 13/166 (7%)
Query: 251 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 310
WN G+ L KSG+ + +I +L +DP N + N G+ Y G +++ F ++
Sbjct: 14 WNNKGINLGKSGKYKEAIECFDKVLKIDPKNVRALDNKGVTYGLLGKAQEALDYFDKVLE 73
Query: 311 KDQNHPAALINYAALL--LCKYGSVLAGAGA------NTGE-----GACLDQASAVNVAK 357
D + A N + KY + N E G L + A
Sbjct: 74 LDPKNAEAWNNKGLAFEDIGKYQEAIKSYDKSLELDPNNSETWYNKGISLKKLEKYQEAL 133
Query: 358 ECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 403
+ ALK+ P W N A ++ + +C +K KL+PN
Sbjct: 134 KSFNKALKSYPNYVDAWNNKGLALAQLKKYQEALECFDKVLKLDPN 179
Score = 42.7 bits (99), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 54/138 (39%), Gaps = 21/138 (15%)
Query: 231 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 290
+E L + ++ D + A WN GL G+ Q +I L +DPNN + N GI
Sbjct: 62 QEALDYFDKVLELDPKNAEAWNNKGLAFEDIGKYQEAIKSYDKSLELDPNNSETWYNKGI 121
Query: 291 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQA 350
+ + +++ K F + +++P NY A +G L Q
Sbjct: 122 SLKKLEKYQEALKSFNKAL---KSYP----NY--------------VDAWNNKGLALAQL 160
Query: 351 SAVNVAKECLLAALKADP 368
A EC LK DP
Sbjct: 161 KKYQEALECFDKVLKLDP 178
Score = 42.0 bits (97), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 63/151 (41%), Gaps = 22/151 (14%)
Query: 280 NNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGA 339
NN N GI +SG +++ +CF ++ D + AL N YG L G
Sbjct: 9 NNVKAWNNKGINLGKSGKYKEAIECFDKVLKIDPKNVRALDNKGVT----YG--LLGKAQ 62
Query: 340 NTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAK 399
LD V L+ DPK A W N A+ G ++ + K +K+ +
Sbjct: 63 -----EALDYFDKV----------LELDPKNAEAWNNKGLAFEDIGKYQEAIKSYDKSLE 107
Query: 400 LEPNCMSTRYAVAVSRIKDAERSQEPTEQLS 430
L+PN T Y +S +K E+ QE + +
Sbjct: 108 LDPNNSETWYNKGIS-LKKLEKYQEALKSFN 137
>gi|321462775|gb|EFX73796.1| hypothetical protein DAPPUDRAFT_215448 [Daphnia pulex]
Length = 689
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 65/155 (41%), Gaps = 14/155 (9%)
Query: 263 RLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINY 322
R + + L LL +DP N + NLG+ +GDM + F+ +L N +AL N
Sbjct: 497 RRREATKRLKHLLQLDPINERALFNLGMLAMDNGDMPSAEHYFKGSVLLKPNFRSALFNL 556
Query: 323 AALL--------LCKYGSVLAGAGANTGEGACLDQASAVNVAKE------CLLAALKADP 368
A LL + L + +G L +N K+ C + L+ DP
Sbjct: 557 ALLLSDTGRPLEAVPFLKQLVHHHQDHIKGLILLGDIYINSMKDLEAAEGCYIRILELDP 616
Query: 369 KAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 403
NL Y GD ++ KCL++A +L P+
Sbjct: 617 MNVQGQHNLCVVYVERGDLSAAEKCLQQAHRLAPH 651
Score = 43.5 bits (101), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 108/284 (38%), Gaps = 61/284 (21%)
Query: 159 AHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESSGD 218
AH +G Y LG+ +++AEE L+ A+ LLP +
Sbjct: 307 AHINVGRTYNNLGR-------FKEAEEAYLK------------------AKSLLPRAKPG 341
Query: 219 NSLDKELEPEELEEIL----------SKLKE---------SMQSDTRQAVVWNTLGLILL 259
S + P L L ++L E SM++D QA + G IL+
Sbjct: 342 ESYQARIAPNHLNVFLNLANLIARNETRLGEADALYRQAISMRADYTQAYI--NRGDILI 399
Query: 260 KSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAAL 319
K R + + V L D NN D NLG+ + G Q+ + + + +H A+L
Sbjct: 400 KMNRTKEAQEVYEKALFYDRNNPDIYYNLGVVLLEQGKPSQALAYLERALELEPDHQASL 459
Query: 320 INYAALLLCKYGSVLAGAGANTGEGACLDQA-SAVNV---------AKECLLAALKADPK 369
+N A +L +A + A D + S VNV A + L L+ DP
Sbjct: 460 LNSAIVL-----QEMAANDKGHQDNAESDSSQSEVNVEVTQWRRREATKRLKHLLQLDPI 514
Query: 370 AAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAV 413
NL GD S+ + + L+PN S + +A+
Sbjct: 515 NERALFNLGMLAMDNGDMPSAEHYFKGSVLLKPNFRSALFNLAL 558
>gi|255562045|ref|XP_002522031.1| o-linked n-acetylglucosamine transferase, ogt, putative [Ricinus
communis]
gi|223538835|gb|EEF40435.1| o-linked n-acetylglucosamine transferase, ogt, putative [Ricinus
communis]
Length = 979
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 105/264 (39%), Gaps = 38/264 (14%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 213
P A+ LG +Y+ LG P +A+ Y++A + RP
Sbjct: 256 PTFPDAYLNLGNVYRALGMPQEAIVCYQRAVQ---------TRPNY-------------- 292
Query: 214 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 273
+ N E +L+ + K+++ D R +N LG L GR++ +I +
Sbjct: 293 AVAFGNLASTYYERGQLDLAIHHYKQAIACDGRFLEAYNNLGNALKDVGRVEEAIQCYNQ 352
Query: 274 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLI-----LKDQNHPAALI-----NYA 323
LA+ P++ + NLG Y + +A ++ + L + A+I NYA
Sbjct: 353 CLALQPSHPQALTNLGNIYMEWNMASTAASYYKATLAVTTGLSAPFNNLAVIYKQQGNYA 412
Query: 324 ALLLCKYGSVLA----GAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLAN 379
+ C Y VL A G + V+ A + + A+ P A ANLA+
Sbjct: 413 DAISC-YNEVLRIDPLAADGLVNRGNTYKEIGRVSDAIQDYIRAITIRPTMAEAHANLAS 471
Query: 380 AYYLTGDHRSSGKCLEKAAKLEPN 403
AY +G ++ K +A L P+
Sbjct: 472 AYKDSGRVEAAVKSYRQALVLRPD 495
Score = 46.2 bits (108), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 72/169 (42%), Gaps = 21/169 (12%)
Query: 234 LSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYF 293
+ K +E+++ + R A + + + G + +I + + PN D NL AY
Sbjct: 109 IEKNEEALRLEPRFAECYGNMANAWKEKGDIDLAIRYYLIAIELRPNFADAWSNLASAYM 168
Query: 294 QSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAV 353
+ G + ++A+C + AL L +L A +N G + V
Sbjct: 169 RKGRLNEAAQCCRQ----------------ALAL---NPLLVDAHSNLGN--LMKAQGLV 207
Query: 354 NVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 402
A C L AL+ P A W+NLA + +GD + + ++A KL+P
Sbjct: 208 QEAYSCYLEALRIQPTFAIAWSNLAGLFLESGDLNRALQYYKEAVKLKP 256
Score = 42.7 bits (99), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 62/165 (37%), Gaps = 13/165 (7%)
Query: 230 LEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLG 289
++E S E+++ A+ W+ L + L+SG L ++ + + P D NLG
Sbjct: 207 VQEAYSCYLEALRIQPTFAIAWSNLAGLFLESGDLNRALQYYKEAVKLKPTFPDAYLNLG 266
Query: 290 IAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAA---------LLLCKYGSVLAGAG-- 338
Y G +++ C+Q + N+ A N A+ L + Y +A G
Sbjct: 267 NVYRALGMPQEAIVCYQRAVQTRPNYAVAFGNLASTYYERGQLDLAIHHYKQAIACDGRF 326
Query: 339 --ANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAY 381
A G L V A +C L P NL N Y
Sbjct: 327 LEAYNNLGNALKDVGRVEEAIQCYNQCLALQPSHPQALTNLGNIY 371
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 65/175 (37%), Gaps = 28/175 (16%)
Query: 251 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 310
W+ L ++ GRL + LA++P D NLG G ++++ C+ + +
Sbjct: 160 WSNLASAYMRKGRLNEAAQCCRQALALNPLLVDAHSNLGNLMKAQGLVQEAYSCYLEALR 219
Query: 311 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 370
A N A L L ++ +N A + A+K P
Sbjct: 220 IQPTFAIAWSNLAGLFL---------------------ESGDLNRALQYYKEAVKLKPTF 258
Query: 371 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDA--ERSQ 423
+ NL N Y G + + C ++A + PN YAVA + ER Q
Sbjct: 259 PDAYLNLGNVYRALGMPQEAIVCYQRAVQTRPN-----YAVAFGNLASTYYERGQ 308
>gi|149058911|gb|EDM09918.1| similar to KIAA0372 gene product (predicted), isoform CRA_b [Rattus
norvegicus]
gi|149058912|gb|EDM09919.1| similar to KIAA0372 gene product (predicted), isoform CRA_b [Rattus
norvegicus]
gi|149058915|gb|EDM09922.1| similar to KIAA0372 gene product (predicted), isoform CRA_b [Rattus
norvegicus]
gi|149058916|gb|EDM09923.1| similar to KIAA0372 gene product (predicted), isoform CRA_b [Rattus
norvegicus]
Length = 609
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 45/92 (48%), Gaps = 2/92 (2%)
Query: 216 SGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTL--GLILLKSGRLQSSISVLSS 273
SG ++D +E E+ E L+ L Q + A W L GL LK+G +++ L +
Sbjct: 64 SGAAAVDLSVELEDTETALAILTAVTQKASSGAAKWAWLRRGLYYLKAGHHSQAVADLQA 123
Query: 274 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCF 305
L DP +C+C +LG AY G + K F
Sbjct: 124 ALRADPKDCNCWESLGEAYLSRGSYTTALKSF 155
>gi|397781371|ref|YP_006545844.1| TPR repeat-containing protein [Methanoculleus bourgensis MS2]
gi|396939873|emb|CCJ37128.1| TPR repeat-containing protein MJ1345 [Methanoculleus bourgensis
MS2]
Length = 184
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 67/164 (40%), Gaps = 15/164 (9%)
Query: 251 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 310
W + LL++G ++S+L+ L ++P + D N G + G E++ +C+ D +L
Sbjct: 11 WLNEAVTLLENGDYSGALSILNKSLELNPMSADAWNNKGFVLDELGRSEEALQCY-DQVL 69
Query: 311 KDQNHPAALINYAALLLCK----------YGSVLA----GAGANTGEGACLDQASAVNVA 356
K + A N L LC Y VL A A GA LD+ A
Sbjct: 70 KLRPDDAGAWNSRGLALCALDRFEEALQCYDQVLELRPDDADAWNNMGAVLDELDRFEEA 129
Query: 357 KECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKL 400
+C LK DP W N + G + +C +A +L
Sbjct: 130 LQCYDRVLKLDPDDMAAWHNKSVTLDKLGRSEEAARCYSRALEL 173
>gi|340345065|ref|ZP_08668197.1| TPR-repeat protein [Candidatus Nitrosoarchaeum koreensis MY1]
gi|339520206|gb|EGP93929.1| TPR-repeat protein [Candidatus Nitrosoarchaeum koreensis MY1]
Length = 273
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 92/213 (43%), Gaps = 36/213 (16%)
Query: 249 VVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDL 308
+++N + L L+ + + +IS+ + +L DP N + N G+A Q + CF DL
Sbjct: 13 MMYNAMSL--LEKNQPKGAISIFTKILKQDPKNISALYNKGLALNQIKKYSDAVTCF-DL 69
Query: 309 ILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADP 368
+L+ AA IN + + + G++ +GA EC A++ DP
Sbjct: 70 LLEINPKDAAAINNKGIAMAELGNI---------QGAS-----------ECYDKAMEVDP 109
Query: 369 KAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRY--AVAVSRIKDAERS---- 422
K + N +H + C EKA ++ P+ + ++ + + ++K E +
Sbjct: 110 KYGPSYFNKGVLLDKLQEHEEALNCFEKAIQVSPSKPNAQFYKGIILGKLKRHEEALNCF 169
Query: 423 -----QEPTEQLSW--AGNEMASILREGDPVQI 448
+ PT ++ G E+A I + ++I
Sbjct: 170 ENIYRKNPTHMDAFFHKGIELAEIGKHEKAIEI 202
>gi|225871857|ref|YP_002753311.1| hypothetical protein ACP_0165 [Acidobacterium capsulatum ATCC
51196]
gi|225793226|gb|ACO33316.1| TPR domain protein [Acidobacterium capsulatum ATCC 51196]
Length = 436
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 71/178 (39%), Gaps = 21/178 (11%)
Query: 237 LKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSG 296
+K ++ D + IL G+L +I+ L L + P+N L AY QSG
Sbjct: 237 VKSALTRDPDDPTLNAEYAAILSAEGKLTEAIASLEKLHQLHPHNPTVANMLADAYLQSG 296
Query: 297 DMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVA 356
DM+++A + +I + AL +Y G L + A
Sbjct: 297 DMDKAAALYPQVIAAQPGNTDALDSY---------------------GQVLIRQKRFPEA 335
Query: 357 KECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVS 414
ALKA P + +A A TG ++ LE+ A+L PN +T + +A +
Sbjct: 336 VSTFQQALKAQPGDIDALSGVAFASNETGQYQQEIAALEQRAQLTPNTPATLFLLATA 393
>gi|88604422|ref|YP_504600.1| hypothetical protein Mhun_3199 [Methanospirillum hungatei JF-1]
gi|88189884|gb|ABD42881.1| TPR repeat [Methanospirillum hungatei JF-1]
Length = 565
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 73/185 (39%), Gaps = 23/185 (12%)
Query: 225 LEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDC 284
E + E L+ ++ D + A W G + G +I L S L +DP+N
Sbjct: 165 FEEGKHREALAWFIKATTYDQKNAPAWYFTGTTYTELGNYAQAIDALQSALTLDPSNAGA 224
Query: 285 IGNLGIAYFQSGDMEQSAKCFQDLI-LKDQNHPAALINYAALLLCKYGSVLAGAGANTGE 343
+G AY + G+ + ++ I L N + YG LA +G
Sbjct: 225 YYEMGRAYEKLGNRTAARNYYETAIKLNPDNVWTRFV---------YGKNLAISG----- 270
Query: 344 GACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 403
D SA+ KE L +LK A W LANAYY TG + + + + A ++P
Sbjct: 271 ----DYESAI---KE-LKTSLKGSSCQASAWYELANAYYQTGQYDQALEAINSALTIDPY 322
Query: 404 CMSTR 408
R
Sbjct: 323 TKEYR 327
>gi|20090471|ref|NP_616546.1| hypothetical protein MA1613 [Methanosarcina acetivorans C2A]
gi|19915489|gb|AAM05026.1| TPR-domain containing protein [Methanosarcina acetivorans C2A]
Length = 1885
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 73/182 (40%), Gaps = 27/182 (14%)
Query: 225 LEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDC 284
LE E+L+E L +++ + + L+K R+Q S+ +L + P N D
Sbjct: 1673 LELEDLKEALKAFEKAALFNPKNEEALYNAATTLIKLNRIQESLGYFDRILEISPENYDA 1732
Query: 285 IGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEG 344
+ G+A+ ++ K F +++ KD N+ A+ N +
Sbjct: 1733 MNYKGVAFCMLEQYREALKSFDNVLKKDPNNIKAVYNVGVV------------------- 1773
Query: 345 ACLDQA---SAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLE 401
C Q +A KE L +P ++ +LA TGD+ + K EK +++
Sbjct: 1774 -CFKQKLYETAARAFKEALTINPWHEPSLRYLGLSLAK----TGDYEDALKAFEKLLRIK 1828
Query: 402 PN 403
P
Sbjct: 1829 PQ 1830
Score = 43.9 bits (102), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 72/178 (40%), Gaps = 22/178 (12%)
Query: 255 GLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQN 314
GL L+K R + +I+ + +L DP++ + + + G+A ++ +++ F D + +
Sbjct: 12 GLDLVKRKRYEKAINTFNKILDKDPDHKEALFHRGLALLETEKTQEALDSFNDALQLEPG 71
Query: 315 HPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIW 374
+ AL +G C A E +AL++ P IW
Sbjct: 72 NSDALYR---------------------KGTCFAALGRFEEALEAYESALESSPDTPEIW 110
Query: 375 ANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQEPTEQLSWA 432
+ A+ +S C EKA +L+P + A+ K AER +E E A
Sbjct: 111 YMMGLAFAEMERAEASILCFEKALELKPEYTAACCAMGTVAGK-AERYEEALEDFERA 167
Score = 38.9 bits (89), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 85/189 (44%), Gaps = 24/189 (12%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 213
P+ A + +G+ +LG+ +A + +KA EI P L I++ L
Sbjct: 945 PQFAEGWYFIGMSCSKLGKHEEASKALKKALEI---------DPAFRDLHDIYYRLGLSC 995
Query: 214 ESSGDNSLDKELEPEELEEILSKLKESMQS--DTRQAVVWNTLGLILLKSGRLQSSISVL 271
G+ ++ L+ EE LS + E+ + D Q +++ L LL+ GR + S
Sbjct: 996 FELGN--FEEALKA--FEEALSTVPENSERNPDEAQDIMYKK-SLSLLRLGRYAEAESGF 1050
Query: 272 SSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYG 331
+LA+DP N + + +L A F+ G +++ + F+ ++ +PA +L + G
Sbjct: 1051 KEVLALDPANTEALAHLSTACFKKGHYKEALEIFERVL---SQNPA-----RKTILFRKG 1102
Query: 332 SVLAGAGAN 340
L G N
Sbjct: 1103 LALKAFGKN 1111
>gi|421099375|ref|ZP_15560029.1| tetratricopeptide repeat protein [Leptospira borgpetersenii str.
200901122]
gi|410797577|gb|EKR99682.1| tetratricopeptide repeat protein [Leptospira borgpetersenii str.
200901122]
Length = 1194
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/169 (18%), Positives = 74/169 (43%), Gaps = 23/169 (13%)
Query: 135 REEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADI 194
R+ ++ +TG + K P + ++H+ +G+++ + + ++ S++++ L D
Sbjct: 685 RKGEIDKAETGFKEILAKKPDSYYSHYQMGIIHLQRKKYEASIDSFDRS----LLLNTDF 740
Query: 195 ARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTL 254
+ + ++H SG L KE + + +MQ D+ + +
Sbjct: 741 VAARIGKGISMYH--------SGSKKLAKE-----------EFETAMQQDSANELAPYNI 781
Query: 255 GLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAK 303
G+IL +I++ ++ +P D + Y++ GD+EQ+ K
Sbjct: 782 GIILFNDNLYNEAIAIFKEIIQKNPEFSDAHYQISYIYYKRGDLEQAEK 830
>gi|407772275|ref|ZP_11119577.1| hypothetical protein TH2_00210 [Thalassospira profundimaris WP0211]
gi|407284228|gb|EKF09744.1| hypothetical protein TH2_00210 [Thalassospira profundimaris WP0211]
Length = 628
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 78/190 (41%), Gaps = 31/190 (16%)
Query: 230 LEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLG 289
+E+ LS+ K++M+S N GL +IS+ L +P+ L
Sbjct: 5 VEKALSRAKQAMKS--------NQFGL----------AISICEKHLKTEPDAAVIWVLLA 46
Query: 290 IAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL--LCKYGSVLA-----------G 336
A+ D EQ+ CF+ ++ +P + N A + K+ L
Sbjct: 47 NAHSAQKDYEQAYACFKKVVDLAPQNPKSYQNLAVFYQGIGKFNEALQCYQKAASCDANY 106
Query: 337 AGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEK 396
A A G G L ++ A++ AL+ DP+ A + NLA+ ++ TG ++ + K
Sbjct: 107 APAYNGAGIVLMTVGQLDAAQQYFAKALQLDPQFADAYNNLAHVFFTTGRFPAAAQSYAK 166
Query: 397 AAKLEPNCMS 406
A L P S
Sbjct: 167 ATDLNPYLTS 176
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/107 (21%), Positives = 48/107 (44%), Gaps = 2/107 (1%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
+ E L +++ D A +N G++L+ G+L ++ + L +DP D NL
Sbjct: 88 KFNEALQCYQKAASCDANYAPAYNGAGIVLMTVGQLDAAQQYFAKALQLDPQFADAYNNL 147
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALIN--YAALLLCKYGSV 333
+F +G +A+ + + +AL N Y+ ++C + +
Sbjct: 148 AHVFFTTGRFPAAAQSYAKATDLNPYLTSALANRFYSLAMMCDWSGI 194
>gi|330995749|ref|ZP_08319646.1| tetratricopeptide repeat protein [Paraprevotella xylaniphila YIT
11841]
gi|329574479|gb|EGG56044.1| tetratricopeptide repeat protein [Paraprevotella xylaniphila YIT
11841]
Length = 491
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 78/172 (45%), Gaps = 23/172 (13%)
Query: 258 LLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPA 317
L+ S R + +I +L+SLL ++P N + +LG AYF D ++ + + D++
Sbjct: 180 LISSNRPKEAIEILNSLLDINPYNLNAWHSLGEAYFVCEDFSKTMETADFALAIDEHDAQ 239
Query: 318 ALINYAALLLCK---------YGSVLAGAGANT----GEGACLDQASAVNVAKECLLAAL 364
AL+ A LL + Y +N +G CL SA+ E L L
Sbjct: 240 ALLLKANSLLQQQNLDEAHQLYLRYFKEHPSNEIPYLFDGVCL---SALERYDEALSQLL 296
Query: 365 KAD-------PKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRY 409
KA+ P+ HI+ANL++ Y D + + ++K ++ P+ + Y
Sbjct: 297 KAEELSQGYSPEQQHIYANLSDVYSKLYDTDKAFEYIDKIKEINPDYDTDLY 348
>gi|315637376|ref|ZP_07892591.1| conserved hypothetical protein [Arcobacter butzleri JV22]
gi|315478350|gb|EFU69068.1| conserved hypothetical protein [Arcobacter butzleri JV22]
Length = 503
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 83/189 (43%), Gaps = 23/189 (12%)
Query: 226 EPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCI 285
E E++E +E+++ D + + +N L L+L G + + + + +D N +
Sbjct: 316 EKGEMDEAEKLFREAIKIDDKNSNTYNNLALLLKNKGEIDEAEKLYREAIKIDDKNSNTY 375
Query: 286 GNLGIAYFQSGDMEQSAKCFQDLI-LKDQNHPAALINYAALLLCKYGSVLAGAGANTGEG 344
NL + G+++++ K +++ I + D+N A N A LL + G + GE
Sbjct: 376 NNLALLLANKGEIDEAEKLYKEAIKIDDKNSKAY--NNLAFLLSEKGEI--------GE- 424
Query: 345 ACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNC 404
A++ A+K D K + I+ NLA GD + K +A K++
Sbjct: 425 -----------AEKLYREAIKIDDKDSDIYYNLALLLKNKGDIDEAEKLYREAIKIDDKD 473
Query: 405 MSTRYAVAV 413
+ +AV
Sbjct: 474 LDVYNNLAV 482
>gi|159477305|ref|XP_001696751.1| PsbB mRNA maturation factor [Chlamydomonas reinhardtii]
gi|20532161|sp|Q9FNS4.1|MBB1_CHLRE RecName: Full=PsbB mRNA maturation factor Mbb1, chloroplastic;
Flags: Precursor
gi|11990205|emb|CAC19558.1| Mbb1 protein [Chlamydomonas reinhardtii]
gi|158275080|gb|EDP00859.1| PsbB mRNA maturation factor [Chlamydomonas reinhardtii]
Length = 662
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 50/256 (19%), Positives = 100/256 (39%), Gaps = 53/256 (20%)
Query: 147 VHVARKMPK--NAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQ 204
+ R+ P+ NA+ + LG M +LG+ +A S +E+ E + V
Sbjct: 257 IQRCRRKPQSQNAYLYNALGCMAAQLGRVGEARSWFEEGTRSA----------EGAASVA 306
Query: 205 IHHAQCLLPESSGDNSLDKELEPEEL-----------------------EEILSKLKESM 241
+ A +L GD ++ + L + L + L+ L+
Sbjct: 307 LWQAWAVLEAKQGDPTVVRYLFRKALGANPRSRYVHLAWALWERRQGNPQHCLALLRRGC 366
Query: 242 QSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQS 301
+ + ++ L+ ++GR++ + + L DP++ G+ + G+M+++
Sbjct: 367 ELNPTDPALYQAWALVEKQAGRIERARELFEQGLRADPSDLYMWQAYGVMEAEQGNMDRA 426
Query: 302 AKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLL 361
+ FQ+ + D P+ + + A GA QA V A+E
Sbjct: 427 RQLFQEGVWADPRSPSTVYVFHAW------------------GALEWQAGNVQTARELFK 468
Query: 362 AALKADPKAAHIWANL 377
AA++ DPK+ WA+
Sbjct: 469 AAVRVDPKSETTWASW 484
>gi|255034468|ref|YP_003085089.1| hypothetical protein Dfer_0662 [Dyadobacter fermentans DSM 18053]
gi|254947224|gb|ACT91924.1| Tetratricopeptide TPR_2 repeat protein [Dyadobacter fermentans DSM
18053]
Length = 330
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 38/185 (20%), Positives = 86/185 (46%), Gaps = 23/185 (12%)
Query: 239 ESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDM 298
E+ + D Q++ N G+IL +G+++ +I+ +A +P+N NLG A Q GD
Sbjct: 2 ENHEIDLSQSL--NNEGVILFLNGQIEEAIAKYRQAIAAEPDNASAHNNLGFALAQQGDF 59
Query: 299 EQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKE 358
EQ+++ ++ + D + +N G++ +G +G + +A+N+ ++
Sbjct: 60 EQASEHYRLSLELDPENDNTWLN--------LGNLKMMSGDYSGARDLFE--NALNITRD 109
Query: 359 CLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKD 418
A++W + A ++ D ++ ++A ++ P+ + ++ I D
Sbjct: 110 I-----------ANVWESYAKLMTISDDPSAAVNAWQQALRIHPHSPDYHLELGIALIAD 158
Query: 419 AERSQ 423
+ SQ
Sbjct: 159 GKHSQ 163
>gi|154707419|ref|YP_001424860.1| tetratricopeptide repeat family protein [Coxiella burnetii Dugway
5J108-111]
gi|154356705|gb|ABS78167.1| tetratricopeptide repeat family protein [Coxiella burnetii Dugway
5J108-111]
Length = 561
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 90/223 (40%), Gaps = 31/223 (13%)
Query: 225 LEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDC 284
+E E + +++LK ++ + + ++ L + + G +I+ LA++P N D
Sbjct: 149 IELENYHQAIAELKRTVAMSSHHSAAFSQLAHVYMYLGDFSKAITYYEKRLALEPENADA 208
Query: 285 IGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEG 344
+ G+A+ + +++ F + +L + HP C Y LA A G+
Sbjct: 209 QYDCGLAHLKDNQFQKAIDHFTNALLLNPEHPD----------CHYS--LATAYLQRGDH 256
Query: 345 ACLDQASAVNVAKECLLAALKADPKAAHI--WANLANAYYLTGDHRSSGKCLEKAAKLEP 402
KE LL L+ K I + N+ + HR + ++A L+P
Sbjct: 257 ------------KEALLHYLRQLEKKPQIECYYNVGVLHMYQERHREAIDYFKQALTLDP 304
Query: 403 NCMSTRYAVA-----VSRIKDAERSQEPTEQLSWAGNEMASIL 440
N +A +++IK A E T L +E+ IL
Sbjct: 305 NYREAHLNIAAVYLKINQIKQAIEHYESTLVLKPNDSEIEHIL 347
>gi|218887207|ref|YP_002436528.1| hypothetical protein DvMF_2117 [Desulfovibrio vulgaris str.
'Miyazaki F']
gi|218758161|gb|ACL09060.1| Tetratricopeptide TPR_2 repeat protein [Desulfovibrio vulgaris str.
'Miyazaki F']
Length = 207
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 47/99 (47%)
Query: 225 LEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDC 284
L+ +L+ L +E+ Q + V W+ +G + L+ G + +I L L DP+
Sbjct: 71 LQRGDLDGCLRYNEEAAQCRAKFPVPWSNIGFVHLQRGEPEEAIKALKKALKWDPDFIQA 130
Query: 285 IGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYA 323
+ +G AYF GD E S + ++ I ++ A N A
Sbjct: 131 MATMGAAYFMQGDYEASIQISREAIKREPGFGPAYNNLA 169
>gi|433284508|emb|CCO06710.1| Magnetosome protein MamA [Candidatus Desulfamplus magnetomortis
BW-1]
Length = 234
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 70/155 (45%), Gaps = 13/155 (8%)
Query: 260 KSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAAL 319
+ G + + L +++ +D + D I LG+AY ++G + + K ++ +I ++ A
Sbjct: 77 QKGDTKKCVEFLENVVRIDNRDADIIYRLGVAYEKNGQPDSAIKAYKKVISLAPDNAKAH 136
Query: 320 INYAALLLCK--YGSVLA-----------GAGANTGEGACLDQASAVNVAKECLLAALKA 366
A LL+ K Y + L A N G D+ + A E A++
Sbjct: 137 YRKAVLLIKKQDYENALTDLEEAIQEKPDSAELNFRLGQVNDRLKNYDKAIEYFTRAVEL 196
Query: 367 DPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLE 401
+P+ + N+A Y DH S KCL++A ++E
Sbjct: 197 NPQFLAAFKNMALTYDSLNDHEGSLKCLKRALEIE 231
>gi|220925996|ref|YP_002501298.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium
nodulans ORS 2060]
gi|219950603|gb|ACL60995.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium
nodulans ORS 2060]
Length = 1056
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 37/176 (21%), Positives = 70/176 (39%), Gaps = 25/176 (14%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
E E ++ ++++ D + + +N GLI +I+ L +DP + N
Sbjct: 279 EHERAIADYDQALRLDPKYKLAYNNRGLIFQNKSEYDQAIADFDQALRLDPKDAVIYRNR 338
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCK--YGSVLAGAGANTGEGAC 346
G A+ G+ +++ + + D + A N K YG LA
Sbjct: 339 GDAFRSKGEYDRAIANYDQALQLDSKYAAVHNNRGLAFYGKGEYGRALAD---------- 388
Query: 347 LDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 402
DQ AL+ DPK A ++ N + + + G+H + ++A +L+P
Sbjct: 389 YDQ-------------ALQLDPKQAIVYTNRGDVFRIKGEHERAIADYDQALRLDP 431
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 38/180 (21%), Positives = 74/180 (41%), Gaps = 27/180 (15%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
E E ++ ++++ D + + +N GLI +I+ L +DP + N
Sbjct: 415 EHERAIADYDQALRLDPKYKLAYNNRGLIFQNKSEYDQAIADFDQALRLDPKDAVIYRNR 474
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCK---YGSVLAGAGANTGEGA 345
G A+ G+ +++ + + D + AA+ N L + YG LA
Sbjct: 475 GDAFRSKGEYDRAIANYDQALQLDPKY-AAVHNNRGLAFYRKGEYGRALAD--------- 524
Query: 346 CLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 405
DQ AL+ DPK A ++ N + + + G+H + ++A +L+P +
Sbjct: 525 -YDQ-------------ALQLDPKQAVVYTNRGDVFRIKGEHDRAIADYDQALRLDPKYI 570
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 56/280 (20%), Positives = 108/280 (38%), Gaps = 24/280 (8%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKA------EEILLRCEADIARPE---LLSLVQ 204
PK A+ GL++Q + +A++ +++A + ++ R D R + ++
Sbjct: 431 PKYKLAYNNRGLIFQNKSEYDQAIADFDQALRLDPKDAVIYRNRGDAFRSKGEYDRAIAN 490
Query: 205 IHHAQCLLPESSG--DNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSG 262
A L P+ + +N E L+ +++Q D +QAVV+ G + G
Sbjct: 491 YDQALQLDPKYAAVHNNRGLAFYRKGEYGRALADYDQALQLDPKQAVVYTNRGDVFRIKG 550
Query: 263 RLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINY 322
+I+ L +DP N G+ + G+ +++ + + D + A N
Sbjct: 551 EHDRAIADYDQALRLDPKYIFAYNNRGLVFQNKGEYDRAIVDYDQTLRLDPKYAIAYANR 610
Query: 323 AALLLCK--YGSVLAGAG-----------ANTGEGACLDQASAVNVAKECLLAALKADPK 369
K Y +A A G G + + A AL+ DPK
Sbjct: 611 GDTFQSKGEYDRAIADYDQALQHNPKYVIAYNGRGLAFYRKGEHDRAIADYEEALRLDPK 670
Query: 370 AAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRY 409
+A + N A G++ + L++A +L+P + Y
Sbjct: 671 SAAAFNNRGAALNKKGEYDRAITDLDQALRLKPGFANPHY 710
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 63/308 (20%), Positives = 114/308 (37%), Gaps = 39/308 (12%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
E ++ ++ ++++ D + AV++ G G +I+ L +DP N
Sbjct: 449 EYDQAIADFDQALRLDPKDAVIYRNRGDAFRSKGEYDRAIANYDQALQLDPKYAAVHNNR 508
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLD 348
G+A+++ G+ ++ L D + L A++ G V G + A D
Sbjct: 509 GLAFYRKGEYGRA--------LADYDQALQLDPKQAVVYTNRGDVFRIKGEHDRAIADYD 560
Query: 349 QASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTR 408
Q AL+ DPK + N + G++ + ++ +L+P +
Sbjct: 561 Q-------------ALRLDPKYIFAYNNRGLVFQNKGEYDRAIVDYDQTLRLDP-----K 602
Query: 409 YAVAVSRIKDAERSQEPTEQLSWAGNEMASILREGDPVQIEPPIAWA----GFAAVQKTH 464
YA+A + D +S+ G +I +Q P A G A +K
Sbjct: 603 YAIAYANRGDTFQSK---------GEYDRAIADYDQALQHNPKYVIAYNGRGLAFYRKGE 653
Query: 465 HEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKADPKAAHIWANLA 524
H+ A A E L A A L++ + A L AL+ P A+ +
Sbjct: 654 HDRAIADYEEALRLDPKSAAAFNNRGAALNKKGEYDRAITDLDQALRLKPGFANPHYHRG 713
Query: 525 NAYYLTGD 532
A+ GD
Sbjct: 714 TAFRHKGD 721
Score = 42.0 bits (97), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 54/265 (20%), Positives = 99/265 (37%), Gaps = 42/265 (15%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 213
PK A H GL + R G+ +A++ Y++A +Q+ Q ++
Sbjct: 499 PKYAAVHNNRGLAFYRKGEYGRALADYDQA-------------------LQLDPKQAVVY 539
Query: 214 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 273
+ GD K E + ++ ++++ D + +N GL+ G +I
Sbjct: 540 TNRGDVFRIKG----EHDRAIADYDQALRLDPKYIFAYNNRGLVFQNKGEYDRAIVDYDQ 595
Query: 274 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKY--- 330
L +DP N G + G+ +++ + + Q++P +I Y L Y
Sbjct: 596 TLRLDPKYAIAYANRGDTFQSKGEYDRAIADYDQAL---QHNPKYVIAYNGRGLAFYRKG 652
Query: 331 --GSVLA-----------GAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANL 377
+A A A GA L++ + A L AL+ P A+ +
Sbjct: 653 EHDRAIADYEEALRLDPKSAAAFNNRGAALNKKGEYDRAITDLDQALRLKPGFANPHYHR 712
Query: 378 ANAYYLTGDHRSSGKCLEKAAKLEP 402
A+ GD + L +A +L P
Sbjct: 713 GTAFRHKGDLDRALADLNEAVRLNP 737
>gi|296127341|ref|YP_003634593.1| hypothetical protein [Brachyspira murdochii DSM 12563]
gi|296019157|gb|ADG72394.1| TPR repeat-containing protein [Brachyspira murdochii DSM 12563]
Length = 750
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 76/168 (45%), Gaps = 23/168 (13%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 213
P NA +F + L+ + LG A+S EK EI + D+A ++L++I
Sbjct: 277 PNNADTYFKIFLIKRALGDYDGALSCLEKILEI---DDTDVAIYNEIALIKI-------- 325
Query: 214 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 273
E E EE L L +++ D A ++NT+GL+ + +I +
Sbjct: 326 ------------ELELYEEALYYLNKALCIDNNNAEIYNTIGLVYHYKRNYEEAIKNFNK 373
Query: 274 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALIN 321
L ++ + N+G++Y++ D E++ + + + + + AA IN
Sbjct: 374 ALELNTSMDMAYYNIGLSYYEMHDYEKAIEYYNKALEINTQYSAAYIN 421
>gi|340359105|ref|ZP_08681600.1| tetratricopeptide (TPR) domain protein [Actinomyces sp. oral taxon
448 str. F0400]
gi|339885115|gb|EGQ74853.1| tetratricopeptide (TPR) domain protein [Actinomyces sp. oral taxon
448 str. F0400]
Length = 260
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 224 ELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCD 283
E EP + EE ++LK ++D+ LG + LK+ Q +++ L +L VDP+N D
Sbjct: 181 EAEPVDTEE-ETRLKTEAEADSANVSARQQLGEMYLKAALYQDAVTYLQQILDVDPDNLD 239
Query: 284 CIGNLGIAYFQSGDME 299
+ +G+A +QS E
Sbjct: 240 ALLTIGVAEYQSNQYE 255
>gi|218184685|gb|EEC67112.1| hypothetical protein OsI_33911 [Oryza sativa Indica Group]
Length = 291
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 63/134 (47%)
Query: 185 EILLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSD 244
++L+R E D++ EL V+ A G L ++ P ++ + +++ + +
Sbjct: 134 QVLVRRELDLSAKELQEQVRSGDASATEYFELGAVMLRRKFYPAAIKYLQQAIQKWDRDE 193
Query: 245 TRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKC 304
A V+N LG+ + +L SI + + P NLG AY Q D++ + K
Sbjct: 194 QDLAQVYNALGVSYKRDNKLDKSIQQFEKAVELQPGYVTAWNNLGDAYEQKKDLKSALKA 253
Query: 305 FQDLILKDQNHPAA 318
F++++L D N+ A
Sbjct: 254 FEEVLLFDPNNTIA 267
>gi|196234492|ref|ZP_03133317.1| Tetratricopeptide TPR_2 repeat protein [Chthoniobacter flavus
Ellin428]
gi|196221473|gb|EDY16018.1| Tetratricopeptide TPR_2 repeat protein [Chthoniobacter flavus
Ellin428]
Length = 333
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 39/77 (50%)
Query: 253 TLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKD 312
TLG++ G+ +IS L+ +AVD N LG+ + Q G EQ+ + F+ I D
Sbjct: 182 TLGIVYYTQGKYDVAISELNKAIAVDGKNATAHNYLGVTWSQKGHQEQAQREFETAIALD 241
Query: 313 QNHPAALINYAALLLCK 329
N+ A N A LL K
Sbjct: 242 PNYADADYNLAVLLATK 258
>gi|388509246|gb|AFK42689.1| unknown [Lotus japonicus]
Length = 347
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 65/140 (46%)
Query: 179 SYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLK 238
++ ++L+R E D++ EL V+ A + G L ++ P + +L ++
Sbjct: 183 TFYVIRQVLVRRELDLSAKELQEQVRSGDASAIGLFELGAVMLRRKFYPAATKYLLQAIE 242
Query: 239 ESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDM 298
+ + A V N LG+ ++ G+L+ I+ + + + P NLG AY D
Sbjct: 243 KWDGENQDLAQVHNALGVSYVRDGKLEKGIAQFETAVKIQPGYVTAWNNLGDAYESKKDY 302
Query: 299 EQSAKCFQDLILKDQNHPAA 318
+ + K F++ +L D N+ A
Sbjct: 303 KSALKAFEEALLFDPNNQIA 322
>gi|212212959|ref|YP_002303895.1| tetratricopeptide repeat family protein [Coxiella burnetii
CbuG_Q212]
gi|212011369|gb|ACJ18750.1| tetratricopeptide repeat family protein [Coxiella burnetii
CbuG_Q212]
Length = 561
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 90/223 (40%), Gaps = 31/223 (13%)
Query: 225 LEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDC 284
+E E + +++LK ++ + + ++ L + + G +I+ LA++P N D
Sbjct: 149 IELENYHQAIAELKRTVAMSSHHSAAFSQLAHVYMYLGDFSKAITYYEKRLALEPENADA 208
Query: 285 IGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEG 344
+ G+A+ + +++ F + +L + HP C Y LA A G+
Sbjct: 209 QYDCGLAHLKDNQFQKAIDYFTNALLLNPEHPD----------CHYS--LATAYLQRGDH 256
Query: 345 ACLDQASAVNVAKECLLAALKADPKAAHI--WANLANAYYLTGDHRSSGKCLEKAAKLEP 402
KE LL L+ K I + N+ + HR + ++A L+P
Sbjct: 257 ------------KEALLHYLRQLEKKPQIECYYNVGVLHMYQERHREAIDYFKQALILDP 304
Query: 403 NCMSTRYAVA-----VSRIKDAERSQEPTEQLSWAGNEMASIL 440
N +A +++IK A E T L +E+ IL
Sbjct: 305 NYREAHLNIAAVYLKINQIKQAIEHYESTLVLKPNDSEIEHIL 347
>gi|118095504|ref|XP_413706.2| PREDICTED: Bardet-Biedl syndrome 4 protein [Gallus gallus]
Length = 532
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 65/158 (41%), Gaps = 21/158 (13%)
Query: 245 TRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKC 304
R + + LG I L G + +I V + P N D + LG+ Y Q GD +++ +
Sbjct: 165 NRHDLTYMMLGKIHLLEGETEKAIEVYKKAVEFSPENTDLLTKLGLIYLQLGDYQKAFEH 224
Query: 305 FQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAAL 364
+ DQ NY A L GS++ G +VA A +
Sbjct: 225 LGKALTYDQG------NYKATLAA--GSMMQAHG-------------DYDVALSKYRAVV 263
Query: 365 KADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 402
+ P++ +W N+ ++ + ++ CL++A L P
Sbjct: 264 SSMPESPPLWNNIGMCFFGKKKYVAAISCLKRANYLAP 301
>gi|347733085|ref|ZP_08866150.1| tetratricopeptide repeat family protein [Desulfovibrio sp. A2]
gi|347518112|gb|EGY25292.1| tetratricopeptide repeat family protein [Desulfovibrio sp. A2]
Length = 207
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 47/99 (47%)
Query: 225 LEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDC 284
L+ +LE L +E+ Q + V W+ +G + L+ G + +I L L DP+
Sbjct: 71 LQRGDLEGCLRYNEEAAQCRAKFPVPWSNIGFVHLQRGEPEEAIKALKKALKWDPDFIQA 130
Query: 285 IGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYA 323
+ +G AY+ GD E S + ++ I ++ A N A
Sbjct: 131 MATMGAAYYMQGDYEASIQISREAIKREPGFGPAYNNLA 169
>gi|443317371|ref|ZP_21046784.1| Tfp pilus assembly protein PilF [Leptolyngbya sp. PCC 6406]
gi|442783060|gb|ELR92987.1| Tfp pilus assembly protein PilF [Leptolyngbya sp. PCC 6406]
Length = 304
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 65/150 (43%), Gaps = 21/150 (14%)
Query: 255 GLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQN 314
GL L++ G++ S+I+ +DP NLG+ Q+GD++ +A F I D
Sbjct: 52 GLALIQQGQVASAIAAFQEATGLDPALAPAHYNLGLVLRQTGDLQGAASAFWQAIQAD-- 109
Query: 315 HPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIW 374
P + Y+ L GA+ EG LDQA + L A++ P +
Sbjct: 110 -PQFAMAYSNL------------GASLWEGGNLDQAV------DYLERAIEIQPDLGNAH 150
Query: 375 ANLANAYYLTGDHRSSGKCLEKAAKLEPNC 404
NL + GD S+ L +A +L P+
Sbjct: 151 YNLGLVHMARGDLESARAALHRATELTPSA 180
>gi|411119538|ref|ZP_11391918.1| TPR repeat-containing protein [Oscillatoriales cyanobacterium
JSC-12]
gi|410711401|gb|EKQ68908.1| TPR repeat-containing protein [Oscillatoriales cyanobacterium
JSC-12]
Length = 2384
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 64/165 (38%), Gaps = 13/165 (7%)
Query: 251 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 310
+N LGL L G+L+ +I+ LA+ PN NLG + ++++ +Q I
Sbjct: 244 FNNLGLALQHQGKLEEAIATFQQALALQPNFPGVCNNLGNLLLEVNRVDEAIASYQQAIA 303
Query: 311 KDQNHPAALINYAALL---------LCKYGSVLA----GAGANTGEGACLDQASAVNVAK 357
+ N+P AL N L + Y L A + GA L + A
Sbjct: 304 QHPNYPEALNNLGNALQRQGKLDEAITHYQKALELRPNFVEALSNLGAVLKDQHKLEAAV 363
Query: 358 ECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 402
L A+ P A I NL NAY + C A L+P
Sbjct: 364 SYLEQAVSLGPSYAEIHNNLGNAYQEQKRVDEAIACYRTAVALKP 408
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 75/176 (42%), Gaps = 21/176 (11%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
++EE + + +Q A W+ LGLI +L +I+ + L + N+ D NL
Sbjct: 889 QVEEARRRCEAFLQKCPDSADGWHLLGLIAHHDRKLDEAIAYYQNTLKANDNHLDTYNNL 948
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLD 348
+A + G ++++ +Q + ++P A NYA LL E + LD
Sbjct: 949 AVALHEQGKLDEAMPYYQKALALKPDNPDAHNNYANLL---------------RERSRLD 993
Query: 349 QASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNC 404
+A A+ A P + NL AYY G+ S+ + +A + +P+
Sbjct: 994 EAIY------HYQQAIAARPDYPDAYNNLGLAYYAKGNFASAAEAYRQAIERKPHF 1043
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 67/163 (41%), Gaps = 21/163 (12%)
Query: 252 NTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILK 311
N +L + RL +I +A P+ D NLG+AY+ G+ +A+ ++ I +
Sbjct: 980 NNYANLLRERSRLDEAIYHYQQAIAARPDYPDAYNNLGLAYYAKGNFASAAEAYRQAIER 1039
Query: 312 DQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAA 371
+ P A L G+ L G N E A Q A+ P A
Sbjct: 1040 KPHFPQA--------LNHLGNALKELG-NFAEAARYYQ------------QAIALKPDYA 1078
Query: 372 HIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVS 414
+ N N + GD +++ + ++A +++PN + A++
Sbjct: 1079 KAYNNWGNIFRDEGDLQTAVQYYDQATEIDPNFAEAHWNKALT 1121
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 41/190 (21%), Positives = 76/190 (40%), Gaps = 13/190 (6%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
+L+E L+ +E+++ A + +G++L + +L +I +A+ P+ D +L
Sbjct: 154 KLDEALACYREAIRLKPNYAEAHHNMGIVLRQQNKLDDAIHYFRQAIALKPHYIDAYTSL 213
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL---------LCKYGSVLA---- 335
G Q G+ E++ C+Q ++ N+ N L + + LA
Sbjct: 214 GSTLQQQGNGEEAIACYQQVVTLKPNYAEGFNNLGLALQHQGKLEEAIATFQQALALQPN 273
Query: 336 GAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLE 395
G G L + + V+ A A+ P NL NA G + +
Sbjct: 274 FPGVCNNLGNLLLEVNRVDEAIASYQQAIAQHPNYPEALNNLGNALQRQGKLDEAITHYQ 333
Query: 396 KAAKLEPNCM 405
KA +L PN +
Sbjct: 334 KALELRPNFV 343
>gi|118580891|ref|YP_902141.1| hypothetical protein Ppro_2478 [Pelobacter propionicus DSM 2379]
gi|118503601|gb|ABL00084.1| Tetratricopeptide TPR_2 repeat protein [Pelobacter propionicus DSM
2379]
Length = 884
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 80/191 (41%), Gaps = 27/191 (14%)
Query: 132 SSSREEKVSSLKTGLVHV---------------ARKMPKNAHAHFLLGL-MYQRLGQPLK 175
S R E +++ K+GL+ + ++ PK A H L GL +YQR Q +
Sbjct: 222 SMDRSETLAAYKSGLIQIEKGDLPKADGIADSMIKEFPKRAEGHRLKGLVLYQR-KQYAE 280
Query: 176 AVSSYEKAEEILLRCEA-------DIARPEL-LSLVQIHHAQCLLPESSGDNSLDKE--L 225
A++S + + +I EA R EL SL Q +P S + L
Sbjct: 281 AMTSLQNSIKIAPTLEAYYFMGLCQYGRGELESSLSQFRQVLDRVPSSRQARLMTATVLL 340
Query: 226 EPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCI 285
+ +++ + ++K+ +Q+D AV N LG + G + L+ ++DP D
Sbjct: 341 AQKRVDDAIGEIKKVLQADDNDAVAHNLLGNAYMAKGMFDEGMRELNRATSIDPRIVDAY 400
Query: 286 GNLGIAYFQSG 296
G YF G
Sbjct: 401 LKKGYFYFSRG 411
>gi|91775613|ref|YP_545369.1| TPR repeat-containing protein [Methylobacillus flagellatus KT]
gi|91709600|gb|ABE49528.1| TPR repeat [Methylobacillus flagellatus KT]
Length = 573
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 82/184 (44%), Gaps = 12/184 (6%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEI-------LLRCEADIARPELLSLVQIH 206
P + HF LG + +LG +A++SY++A +I + + +LL H
Sbjct: 77 PSISEMHFNLGSVLSQLGHEDEAITSYKRAIQISPGLAVAHFNLGTLLQKKQLLEEAIAH 136
Query: 207 HAQCLLPESS---GDNSLDKELEPE-ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSG 262
+ Q ++ E ++ L+ + L++ ++ ++S+ + + A+ L L G
Sbjct: 137 YRQAVVIEPGFFEAYGAMGTALQQQGHLDDAIACYRQSL-AISDHALGHFNLATALRDRG 195
Query: 263 RLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINY 322
L+ ++S +A+ PN D NLG + GDME + C+ + H AA N
Sbjct: 196 ALEQAVSHYRQAIALQPNYADAHNNLGEVFRDQGDMENAVACYLQALRMKPGHQAASFNM 255
Query: 323 AALL 326
A L
Sbjct: 256 AQFL 259
>gi|433610413|ref|YP_007193874.1| Flp pilus assembly protein TadD, contains TPR repeats
[Sinorhizobium meliloti GR4]
gi|429555355|gb|AGA10275.1| Flp pilus assembly protein TadD, contains TPR repeats
[Sinorhizobium meliloti GR4]
Length = 1202
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 75/175 (42%), Gaps = 21/175 (12%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
+LE L+ L+ ++++ + +WN+LGL+ G +++ + +A+DP + NL
Sbjct: 423 DLEGALADLERALKTAPGSSSIWNSLGLVQGARGDNRAAEAAFKQAIALDPLDPVSHANL 482
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLD 348
I Y M ++ + + D + AL+ G
Sbjct: 483 AIQYMDEMRMAEAKREIDTALSVDPSFDVALV---------------------ARGRYHM 521
Query: 349 QASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 403
Q + A E LLA A+P ++ LA A+Y GD + + L+ A +L+PN
Sbjct: 522 QNGEADKAVEDLLAGSTANPAYSNAQLLLAAAHYEKGDRIPAAQALDNADRLDPN 576
>gi|399076961|ref|ZP_10752228.1| hypothetical protein PMI01_03318 [Caulobacter sp. AP07]
gi|398036207|gb|EJL29427.1| hypothetical protein PMI01_03318 [Caulobacter sp. AP07]
Length = 598
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 83/191 (43%), Gaps = 13/191 (6%)
Query: 159 AHFLLGLMYQRLGQPLKAVSSYEKAEEILLR---CEADIAR-------PELLSLVQIHHA 208
A +LG+ ++ G ++ YE A +L R D+ R PE+ + IH+
Sbjct: 94 AWHVLGIAREKTGDFAGSMRCYEAALTLLPRHGAVAGDLGRLAFRMDMPEIAAKFFIHYL 153
Query: 209 QCLLPESSGDNSLDKEL-EPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSS 267
+ + G N+L L E +E + L+ ++Q++ Q ++WNTLG ++ G Q+
Sbjct: 154 RERPDDLEGINNLACALRELNRCDEAIDVLRPAIQANPEQPLLWNTLGTVMCSLGDGQTG 213
Query: 268 ISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQS-AKCFQDLILKDQNHPAALINYA-AL 325
++ L + P N A GD+E + A C + L + A + + A
Sbjct: 214 VTFFDETLRLAPQFGKAYHNRAYAKIDLGDVEGALADCDSAIALAESAEDLATMQFGRAT 273
Query: 326 LLCKYGSVLAG 336
+L G V G
Sbjct: 274 ILLALGRVEEG 284
Score = 38.9 bits (89), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 35/178 (19%), Positives = 70/178 (39%), Gaps = 21/178 (11%)
Query: 239 ESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDM 298
++++ D R V W+ LG+ K+G S+ + L + P + G+LG F+
Sbjct: 83 KALERDDRLGVAWHVLGIAREKTGDFAGSMRCYEAALTLLPRHGAVAGDLGRLAFRMDMP 142
Query: 299 EQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKE 358
E +AK F + + + + N A L + + + A +
Sbjct: 143 EIAAKFFIHYLRERPDDLEGINNLA---------------------CALRELNRCDEAID 181
Query: 359 CLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRI 416
L A++A+P+ +W L GD ++ ++ +L P + A ++I
Sbjct: 182 VLRPAIQANPEQPLLWNTLGTVMCSLGDGQTGVTFFDETLRLAPQFGKAYHNRAYAKI 239
>gi|158522425|ref|YP_001530295.1| hypothetical protein Dole_2414 [Desulfococcus oleovorans Hxd3]
gi|158511251|gb|ABW68218.1| TPR repeat-containing protein [Desulfococcus oleovorans Hxd3]
Length = 589
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 232 EILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIA 291
E L + ++ QAV L LL+ GR+ +I+ L++DP N NLG A
Sbjct: 412 ETLYRHAAALHPGNIQAV--TNLADTLLEKGRIDEAIAFYRQALSMDPENALVHNNLGAA 469
Query: 292 YFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLL 327
+ ++GD +++A F+ + D HP A N LL+
Sbjct: 470 FLKAGDRQRAAAGFRQALKYDPGHPMAGNNLGNLLV 505
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 50/108 (46%), Gaps = 2/108 (1%)
Query: 207 HAQCLLPES--SGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRL 264
HA L P + + N D LE ++E ++ ++++ D A+V N LG LK+G
Sbjct: 417 HAAALHPGNIQAVTNLADTLLEKGRIDEAIAFYRQALSMDPENALVHNNLGAAFLKAGDR 476
Query: 265 QSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKD 312
Q + + L DP + NLG + G +++ CF+ + D
Sbjct: 477 QRAAAGFRQALKYDPGHPMAGNNLGNLLVEMGRTDEAIACFEKTLTPD 524
>gi|229593982|ref|XP_001025913.2| TPR Domain containing protein [Tetrahymena thermophila]
gi|225567182|gb|EAS05668.2| TPR Domain containing protein [Tetrahymena thermophila SB210]
Length = 804
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 98/250 (39%), Gaps = 44/250 (17%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 213
PK +F LG+ Y+ G +A+ SY+K EI P+ H CL
Sbjct: 568 PKEDSCYFNLGIAYENKGMSGEAIKSYQKCVEI---------NPQ--------HDSCLY- 609
Query: 214 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 273
+ G K + L+E + ++ ++ + ++ + LG+ G +I
Sbjct: 610 -NLGIAYKAKGM----LDEAIKSYQKCLEINPKKDICLYNLGIAYKAKGVYDEAIKSYYK 664
Query: 274 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSV 333
L ++P + +C NLG+ Y+ G ++ + K +Q + + H +N
Sbjct: 665 CLEINPKHDNCHMNLGLTYYDKGMLDDAIKSYQKCLKINPKHDICYMNLGI--------- 715
Query: 334 LAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKC 393
A G+G A+ ++CL + +PK + NL AY G + +
Sbjct: 716 -----AYKGKGML---EEAIQFYQKCL----EINPKKDSCYYNLGIAYKAKGMMDKAIQS 763
Query: 394 LEKAAKLEPN 403
+K L PN
Sbjct: 764 YKKCLSLNPN 773
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 106/262 (40%), Gaps = 46/262 (17%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 213
PK ++ LG+ Y+ G +A+ +Y+K EI + E +L + A+ L+
Sbjct: 432 PKEDSCYYNLGIAYKDKGMLDEAIKAYQKCLEINPKKEIC-----FYNLGIAYKAKGLID 486
Query: 214 ESSGDNSLDKELEPEE----------------LEEILSKLKESMQSDTRQAVVWNTLGLI 257
E+ E+ PE+ L+E + ++ ++ + ++ + + LGL
Sbjct: 487 EAIQSYQKCLEINPEKDTCLHNLGIAYKAKGLLDEAIKSYQKCIEINPKKDIYYMNLGLA 546
Query: 258 LLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPA 317
++ G L +I + ++P C NLGIAY G ++ K +Q + + H +
Sbjct: 547 YMEKGMLNEAIKQYQKCIEINPKEDSCYFNLGIAYENKGMSGEAIKSYQKCVEINPQHDS 606
Query: 318 ALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANL 377
L N G LD+ A+ ++C L+ +PK NL
Sbjct: 607 CLYN---------------LGIAYKAKGMLDE--AIKSYQKC----LEINPKKDICLYNL 645
Query: 378 ANAYYLTGDH----RSSGKCLE 395
AY G + +S KCLE
Sbjct: 646 GIAYKAKGVYDEAIKSYYKCLE 667
Score = 42.7 bits (99), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 72/168 (42%), Gaps = 23/168 (13%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 213
PK + LG+ Y+ G +A+ SY K EI P+ H C +
Sbjct: 636 PKKDICLYNLGIAYKAKGVYDEAIKSYYKCLEI---------NPK--------HDNCHM- 677
Query: 214 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 273
+ G DK + L++ + ++ ++ + + + + LG+ G L+ +I
Sbjct: 678 -NLGLTYYDKGM----LDDAIKSYQKCLKINPKHDICYMNLGIAYKGKGMLEEAIQFYQK 732
Query: 274 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALIN 321
L ++P C NLGIAY G M+++ + ++ + + NH L N
Sbjct: 733 CLEINPKKDSCYYNLGIAYKAKGMMDKAIQSYKKCLSLNPNHKNCLKN 780
>gi|381158848|ref|ZP_09868081.1| Flp pilus assembly protein TadD [Thiorhodovibrio sp. 970]
gi|380880206|gb|EIC22297.1| Flp pilus assembly protein TadD [Thiorhodovibrio sp. 970]
Length = 685
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 39/186 (20%), Positives = 75/186 (40%), Gaps = 21/186 (11%)
Query: 231 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 290
E+ L++++ +A + LGL L GR++ S + +A +P + D NLG
Sbjct: 56 EQAAKYLRQALIEAPERAELHFMLGLALEPIGRIRESAAAFEQTIARNPGHADAWNNLGA 115
Query: 291 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQA 350
+ + + EQ+ F + Q P Y+ L G+ L +
Sbjct: 116 MHIRLREYEQATNAF---VRAAQLQPGNSHYYSNL------------------GSALREQ 154
Query: 351 SAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYA 410
+ A+ L ++ DP A W NL + + +C ++A +L P+ + Y
Sbjct: 155 GKLEEARPILEKTVELDPNNACAWTNLGDVLSACNQPQEGSRCYQRALELNPDEPAAAYN 214
Query: 411 VAVSRI 416
++ R+
Sbjct: 215 QSIERL 220
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 78/186 (41%), Gaps = 27/186 (14%)
Query: 136 EEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIA 195
E+ L+ L+ + P+ A HF+LGL + +G+ ++ +++E+ IA
Sbjct: 56 EQAAKYLRQALI----EAPERAELHFMLGLALEPIGRIRESAAAFEQT----------IA 101
Query: 196 RPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLG 255
R HA +N + E E+ + + Q + ++ LG
Sbjct: 102 R-------NPGHADAW------NNLGAMHIRLREYEQATNAFVRAAQLQPGNSHYYSNLG 148
Query: 256 LILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNH 315
L + G+L+ + +L + +DPNN NLG ++ ++C+Q + + +
Sbjct: 149 SALREQGKLEEARPILEKTVELDPNNACAWTNLGDVLSACNQPQEGSRCYQRALELNPDE 208
Query: 316 PAALIN 321
PAA N
Sbjct: 209 PAAAYN 214
>gi|149058910|gb|EDM09917.1| similar to KIAA0372 gene product (predicted), isoform CRA_a [Rattus
norvegicus]
gi|149058913|gb|EDM09920.1| similar to KIAA0372 gene product (predicted), isoform CRA_a [Rattus
norvegicus]
gi|149058914|gb|EDM09921.1| similar to KIAA0372 gene product (predicted), isoform CRA_a [Rattus
norvegicus]
Length = 809
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 45/92 (48%), Gaps = 2/92 (2%)
Query: 216 SGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTL--GLILLKSGRLQSSISVLSS 273
SG ++D +E E+ E L+ L Q + A W L GL LK+G +++ L +
Sbjct: 264 SGAAAVDLSVELEDTETALAILTAVTQKASSGAAKWAWLRRGLYYLKAGHHSQAVADLQA 323
Query: 274 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCF 305
L DP +C+C +LG AY G + K F
Sbjct: 324 ALRADPKDCNCWESLGEAYLSRGSYTTALKSF 355
>gi|433608140|ref|YP_007040509.1| hypothetical protein BN6_63930 [Saccharothrix espanaensis DSM
44229]
gi|407885993|emb|CCH33636.1| hypothetical protein BN6_63930 [Saccharothrix espanaensis DSM
44229]
Length = 691
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 70/160 (43%), Gaps = 15/160 (9%)
Query: 255 GLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQN 314
G++L + GR + +++ +L + P + NL + + GD+ ++ F ++ D
Sbjct: 477 GVLLRRLGRNEEAVAAFERVLPLTPPFPEVHYNLADVWLELGDVRRALAAFDYVLELDPG 536
Query: 315 HPAALINYAALLLCKYG-------SVLAGAGANTG-------EGACLDQASAVNVAKECL 360
H AL+N A+ L C+ G V AG + +G L +A A + +
Sbjct: 537 HVPALVNRAS-LRCEVGDSHGAWDDVRAGLALSPDNVHLLCVQGRLLVEAGDPRRASDVV 595
Query: 361 LAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKL 400
AAL+ADP A WA + GD + ++A L
Sbjct: 596 SAALRADPGFAPGWALRGQVRFEAGDFDGALTDFDRAVAL 635
>gi|158522430|ref|YP_001530300.1| hypothetical protein Dole_2419 [Desulfococcus oleovorans Hxd3]
gi|158511256|gb|ABW68223.1| Tetratricopeptide TPR_2 repeat protein [Desulfococcus oleovorans
Hxd3]
Length = 792
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 43/77 (55%)
Query: 251 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 310
WN LGL L +G + +++ ++ L +DP+ + NLG+ Y +G +++ +CF+++I
Sbjct: 428 WNNLGLALRTAGLSEEALTAFNTALTLDPHYTEARNNLGVLYQHTGKTQKAVQCFENVIK 487
Query: 311 KDQNHPAALINYAALLL 327
+ +N +LL
Sbjct: 488 LNPGFAPGYLNMGKVLL 504
>gi|300865590|ref|ZP_07110367.1| TPR repeat-containing protein (fragment) [Oscillatoria sp. PCC
6506]
gi|300336405|emb|CBN55517.1| TPR repeat-containing protein (fragment) [Oscillatoria sp. PCC
6506]
Length = 410
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 82/229 (35%), Gaps = 23/229 (10%)
Query: 194 IARPELLSLVQIHHA--QCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVW 251
A PE+ + + + L+ S D EE + +++Q A W
Sbjct: 158 FADPEIQEFTPVKYGDRKQLMSGSDYAKQGDAYFFENRYEEAVDAYNQALQIQPDLADTW 217
Query: 252 NTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL- 310
N G++L + R Q +I + PN D N G+ + + ++ C++ I
Sbjct: 218 NNRGVVLTRMQRYQEAIDSYEQATKLRPNYPDAWNNRGVVLLEMQQLSEAIACYEQAIQA 277
Query: 311 ----------------KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVN 354
K Q + A+I+Y L+ K A G L + +
Sbjct: 278 KADYADAWNNRGVALSKMQKYEDAVISYNQALVIKNDYT----DAWNNRGVALTKLQKYD 333
Query: 355 VAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 403
A + A K P IW N A Y L G+ + + L++A L N
Sbjct: 334 AAIDSYDNATKIRPDFYRIWYNKARCYALQGEIELALENLKRAFNLNQN 382
>gi|82617844|gb|ABB84838.1| Tetratricopeptide repeat-TPR protein [uncultured delta
proteobacterium DeepAnt-32C6]
Length = 333
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 67/162 (41%), Gaps = 12/162 (7%)
Query: 156 NAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPES 215
+A H LG RLG+ AV +Y++A LR E +A + + A L E
Sbjct: 167 DAGLHLALGRTLARLGELTSAVDAYKEA----LRLEPGLAS----AWFNLGRAYARLGEL 218
Query: 216 SGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLL 275
+ + S + L ++ E +++ D A W L + GR+ I L S +
Sbjct: 219 AEEASERRRLTKQQQE----AYTQTVTCDPSFAKAWYNLAITYFTQGRVADEIGALESAV 274
Query: 276 AVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPA 317
P+ + NL AY +GD ++ K + I + PA
Sbjct: 275 RARPDYPGALYNLAHAYEGTGDQARALKTWTKYIRVSETDPA 316
>gi|297539636|ref|YP_003675405.1| hypothetical protein M301_2466 [Methylotenera versatilis 301]
gi|297258983|gb|ADI30828.1| TPR repeat-containing protein [Methylotenera versatilis 301]
Length = 510
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 70/175 (40%), Gaps = 28/175 (16%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 213
P HF LG+ L + +A +SY KA I L+ A L +++Q
Sbjct: 78 PNTPDLHFNLGITLTNLNRYEEAEASYRKA--IALQAGFFEAHGNLGTVLQ--------- 126
Query: 214 ESSGDNSLDKELEPEELEEILSKLKE--SMQSDTRQAVVWNTLGLILLKSGRLQSSISVL 271
+ LEE ++ ++ S+ D R LG L G+L +I+
Sbjct: 127 ------------KQGRLEEAVTSYRKALSIHEDPRGHF---NLGTALRDKGKLDEAITHF 171
Query: 272 SSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL 326
+ + PN D LG Y G+ME + KC+ D + +QNH A N L
Sbjct: 172 KQAIKMFPNYADAHNYLGECYRDQGNMEDAIKCYFDTLALNQNHAGANYNMGEFL 226
>gi|56751783|ref|YP_172484.1| hypothetical protein syc1774_c [Synechococcus elongatus PCC 6301]
gi|81301137|ref|YP_401345.1| TPR repeat-containing protein [Synechococcus elongatus PCC 7942]
gi|56686742|dbj|BAD79964.1| hypothetical protein [Synechococcus elongatus PCC 6301]
gi|81170018|gb|ABB58358.1| TPR repeat [Synechococcus elongatus PCC 7942]
Length = 363
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 68/168 (40%), Gaps = 21/168 (12%)
Query: 230 LEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLG 289
L E + ++++ D +Q VWN G++L K GRL+ +I+ +A+ + N G
Sbjct: 80 LPEAVESYEQALAIDRQQPEVWNNRGIVLRKLGRLEDAIASYQQAIALAAHYAQAWANCG 139
Query: 290 IAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQ 349
A +Q G ++ + ++ + D + +A + G + CLDQ
Sbjct: 140 FALWQQGRYREAVRHYEQSVAIDPDQSSA--------WRQLGQIYLSVDQPDQALRCLDQ 191
Query: 350 ASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKA 397
A A+ P+ A W +A Y G + ++ E A
Sbjct: 192 AIALQ-------------PQQATAWTWRGHALYNLGQYAAALTSYENA 226
Score = 43.1 bits (100), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 43/221 (19%), Positives = 86/221 (38%), Gaps = 31/221 (14%)
Query: 228 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 287
+ LE +L+ ++ + R +WN G++L + R +++ + L + P + + N
Sbjct: 10 QSLEALLAAYDFRLRHEPRNCTLWNNRGILLERLNRWTEALASYNCALEITPQRQEALNN 69
Query: 288 LGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSV-------------- 333
I G + ++ + ++ + D+ P + N ++L K G +
Sbjct: 70 RAIVLEHLGRLPEAVESYEQALAIDRQQPE-VWNNRGIVLRKLGRLEDAIASYQQAIALA 128
Query: 334 --LAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSG 391
A A AN G L Q A ++ DP + W L Y +
Sbjct: 129 AHYAQAWANCG--FALWQQGRYREAVRHYEQSVAIDPDQSSAWRQLGQIYLSVDQPDQAL 186
Query: 392 KCLEKAAKLEPNCMST------------RYAVAVSRIKDAE 420
+CL++A L+P + +YA A++ ++AE
Sbjct: 187 RCLDQAIALQPQQATAWTWRGHALYNLGQYAAALTSYENAE 227
>gi|384208242|ref|YP_005593962.1| TPR domain-containing protein [Brachyspira intermedia PWS/A]
gi|343385892|gb|AEM21382.1| putative TPR domain-containing protein [Brachyspira intermedia
PWS/A]
Length = 817
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 44/210 (20%), Positives = 91/210 (43%), Gaps = 27/210 (12%)
Query: 234 LSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYF 293
LS L + ++ D V++N + LI ++ ++S L+ L +D NN + ++G+ Y+
Sbjct: 367 LSCLNKILEIDNTDVVIYNEIALIKVELELYDEALSYLNKALDIDTNNAEIYNSIGLVYY 426
Query: 294 QSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGA--CLDQAS 351
D E++ K F I + + +A A N G D +
Sbjct: 427 YKKDYEEAIKNFNKAI-------------------ELNTSMASAYYNIGLAYYEMHDYEN 467
Query: 352 AVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAV 411
++ + AL+ +P+ A + NL + G+++ + +KA ++ P+ Y +
Sbjct: 468 SIQYYNK----ALEINPQYASAYINLGLIKHNLGNYKEAIDYYKKALEINPDYSLAYYNI 523
Query: 412 AVSR--IKDAERSQEPTEQLSWAGNEMASI 439
A++ ++D + S E + G + A I
Sbjct: 524 ALAEMSLEDYKNSLEDFNKALELGYDEAEI 553
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 51/98 (52%)
Query: 224 ELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCD 283
++E E +E LS L +++ DT A ++N++GL+ + +I + + ++ +
Sbjct: 391 KVELELYDEALSYLNKALDIDTNNAEIYNSIGLVYYYKKDYEEAIKNFNKAIELNTSMAS 450
Query: 284 CIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALIN 321
N+G+AY++ D E S + + + + + +A IN
Sbjct: 451 AYYNIGLAYYEMHDYENSIQYYNKALEINPQYASAYIN 488
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 125/306 (40%), Gaps = 53/306 (17%)
Query: 253 TLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKD 312
+GL L + +I++ ++A P+N + N G+ F E++ F +I D
Sbjct: 112 NVGLCYLYMKNYKEAINIYDEVIADFPDNINSYNNRGLCKFYLSQFEEAINDFNKVIELD 171
Query: 313 QNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAH 372
+N A++ Y + LCKY LD+ + ALK KA
Sbjct: 172 KNSTASMA-YNYIGLCKYH---------------LDEIT----------EALKYYEKAIE 205
Query: 373 IWANLANAYYLTGDHRSSGKC-------LEKAAKLEPNCMSTRYAVAVSRIK-DAERSQE 424
I NL NAY+ + SG+ L KA +++P + T + + IK D E E
Sbjct: 206 INPNLINAYHNIALIKHSGEFDDEALSYLNKALEIDPGNLETY--LKIYSIKLDLELYDE 263
Query: 425 PTEQLS----WAGNEMASILREGDPVQIEPPIAWAGFAAVQKTHHEVAAAFETEENELSK 480
E L+ +++ R G+ ++I+ AG+ ++++ + A E N +
Sbjct: 264 ANEYLNKILEMYPDDLYVYDRIGN-IKID-----AGY--MEESLEYLKKALEINPNFIDA 315
Query: 481 MEECAGAGESAFLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCL 540
+ A A L + N A E L AL+ P +A + + D+ + CL
Sbjct: 316 YYDIAFA-----LHKLDLNNEALEYLEKALQIYPNSADTYFKMFLVKRALRDYEGALSCL 370
Query: 541 EKVLMV 546
K+L +
Sbjct: 371 NKILEI 376
Score = 40.4 bits (93), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 69/308 (22%), Positives = 117/308 (37%), Gaps = 62/308 (20%)
Query: 159 AHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESS-- 216
A+ +GL L + +A+ YEKA EI P +L+ +H L+ S
Sbjct: 179 AYNYIGLCKYHLDEITEALKYYEKAIEI---------NP---NLINAYHNIALIKHSGEF 226
Query: 217 GDNSLDK-----ELEPEELE-------------------EILSKLKESMQSDTRQAVVWN 252
D +L E++P LE E L+K+ E D V++
Sbjct: 227 DDEALSYLNKALEIDPGNLETYLKIYSIKLDLELYDEANEYLNKILEMYPDDL---YVYD 283
Query: 253 TLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKD 312
+G I + +G ++ S+ L L ++PN D ++ A D+ A + + L
Sbjct: 284 RIGNIKIDAGYMEESLEYLKKALEINPNFIDAYYDIAFA-LHKLDLNNEALEYLEKAL-- 340
Query: 313 QNHPAALINYAALLLCK-----YGSVLAGAG----ANTGEGACLDQASAVNVAKEC---- 359
Q +P + Y + L K Y L+ + + ++ + + V E
Sbjct: 341 QIYPNSADTYFKMFLVKRALRDYEGALSCLNKILEIDNTDVVIYNEIALIKVELELYDEA 400
Query: 360 ---LLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAV--AVS 414
L AL D A I+ ++ YY D+ + K KA +L + S Y + A
Sbjct: 401 LSYLNKALDIDTNNAEIYNSIGLVYYYKKDYEEAIKNFNKAIELNTSMASAYYNIGLAYY 460
Query: 415 RIKDAERS 422
+ D E S
Sbjct: 461 EMHDYENS 468
>gi|196004358|ref|XP_002112046.1| hypothetical protein TRIADDRAFT_55686 [Trichoplax adhaerens]
gi|190585945|gb|EDV26013.1| hypothetical protein TRIADDRAFT_55686 [Trichoplax adhaerens]
Length = 445
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 51/107 (47%), Gaps = 14/107 (13%)
Query: 275 LAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVL 334
+ +DP + D NLG Y++ +ME + CF D I + +N + L +Y VL
Sbjct: 103 VKLDPTSIDAWNNLGECYWKKKNMEAAKNCFNDAITRSRNKDS---------LRRYSMVL 153
Query: 335 AGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAY 381
G++T E + +V++AKE A+ D + W L NAY
Sbjct: 154 RQLGSDTSE-KFKNICESVDIAKE----AVSLDVSDGNSWLVLGNAY 195
>gi|116329905|ref|YP_799623.1| hypothetical protein LBJ_0121 [Leptospira borgpetersenii serovar
Hardjo-bovis str. JB197]
gi|116123594|gb|ABJ74865.1| TPR-repeat-containing protein [Leptospira borgpetersenii serovar
Hardjo-bovis str. JB197]
Length = 1197
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 30/169 (17%), Positives = 75/169 (44%), Gaps = 23/169 (13%)
Query: 135 REEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADI 194
R+ ++ ++G + K P + ++H+ +G+++ + + ++ S++++ L D
Sbjct: 688 RKGEIDKAESGFKEILAKKPDSYYSHYQMGIIHLQRKKYEASIDSFDRS----LLLNTDF 743
Query: 195 ARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTL 254
+ + ++H SG+ L KE + + +MQ D+ + +
Sbjct: 744 VAARIGKGISMYH--------SGNKKLAKE-----------EFETAMQQDSANELAPYNI 784
Query: 255 GLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAK 303
G+IL +I++ ++ +P D + Y++ GD+EQ+ K
Sbjct: 785 GIILFNDNLYNEAIAIFKEIIQKNPEFSDAHYQISYIYYKRGDLEQAEK 833
>gi|124486883|ref|NP_001074821.1| tetratricopeptide repeat protein 37 [Mus musculus]
gi|162318356|gb|AAI56422.1| Tetratricopeptide repeat domain 37 [synthetic construct]
Length = 1563
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 46/92 (50%), Gaps = 2/92 (2%)
Query: 216 SGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTL--GLILLKSGRLQSSISVLSS 273
SG ++D LE E+ E L+ L Q + A W L GL LK+G+ +++ L +
Sbjct: 530 SGAAAVDLSLELEDTETALAILTAVTQKASAGAAKWAWLRRGLYHLKAGQHSQAVADLQA 589
Query: 274 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCF 305
L DP +C+C +LG AY G + K F
Sbjct: 590 ALRADPKDCNCWESLGEAYLSRGGYTTALKSF 621
Score = 38.9 bits (89), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 31/53 (58%)
Query: 360 LLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVA 412
L AAL+ADPK + W +L AY G + ++ K KA++L P+ + + VA
Sbjct: 587 LQAALRADPKDCNCWESLGEAYLSRGGYTTALKSFMKASELNPDSTYSVFKVA 639
>gi|307154454|ref|YP_003889838.1| hypothetical protein Cyan7822_4657 [Cyanothece sp. PCC 7822]
gi|306984682|gb|ADN16563.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 7822]
Length = 434
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 78/182 (42%), Gaps = 26/182 (14%)
Query: 148 HVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHH 207
V R+ PK AHA++ G+ Y +G +A+ Y +A + P LL I +
Sbjct: 273 QVIRRQPKEAHAYYGRGINYAEIGSFQQAIDDYIQATNL---------NPRLL----ITN 319
Query: 208 AQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSS 267
LL G N L + E IL +++Q + +V ++ G I + + +
Sbjct: 320 FDVLL----GRNPL------KNAEAILQPFNQAIQENPVSSVAYHNRGNIRYQLKDYRGA 369
Query: 268 ISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKC--FQDLILKDQNHPAALINYAAL 325
I + + D N N G+A +Q GD +Q AK Q +IL Q AA + A
Sbjct: 370 IEDYTLAIRFDNNYALAYNNRGVARYQVGD-KQGAKADLQQAVILFQQQKDAAKVQQALA 428
Query: 326 LL 327
+L
Sbjct: 429 VL 430
>gi|384534193|ref|YP_005716857.1| FecR protein [Sinorhizobium meliloti BL225C]
gi|333816369|gb|AEG09036.1| FecR protein [Sinorhizobium meliloti BL225C]
Length = 1202
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 75/175 (42%), Gaps = 21/175 (12%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
+LE L+ L+ ++++ + +WN+LGL+ G +++ + +A+DP + NL
Sbjct: 423 DLEGALADLERALKTAPGSSSIWNSLGLVQGARGDNRAAEAAFKQAIALDPLDPVSHANL 482
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLD 348
I Y M ++ + + D + AL+ G
Sbjct: 483 AIQYMDEMRMAEAKREIDTALSVDPSFDVALV---------------------ARGRYHM 521
Query: 349 QASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 403
Q + A E LLA A+P ++ LA A+Y GD + + L+ A +L+PN
Sbjct: 522 QNGEADKAVEDLLAGSTANPAYSNAQLLLAAAHYEKGDRIPAAQALDNADRLDPN 576
>gi|428220576|ref|YP_007104746.1| hypothetical protein Syn7502_00451 [Synechococcus sp. PCC 7502]
gi|427993916|gb|AFY72611.1| tetratricopeptide repeat protein [Synechococcus sp. PCC 7502]
Length = 271
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 110/279 (39%), Gaps = 62/279 (22%)
Query: 148 HVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKA---EEILLRCEADIAR----PELL 200
HV R M K A A Y L +PLKA++ YE+ E +++AR L
Sbjct: 5 HVGR-MQKQAEA-------YLSLDKPLKAIAIYEQIISQEPNFAPAHSELARVLESQGWL 56
Query: 201 SLVQIHHAQCLL--PESSGDNSLDKELEPEEL-------EEILSKLKESMQSDTRQAVVW 251
L H+AQ L P S SLD L +L + +S + ++ + + +
Sbjct: 57 ELAIPHYAQALTLAPNSY---SLDSHLNFGKLLHSRGNIDGAISSYQRAININPQYIRAY 113
Query: 252 NTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIG-----NLGIAYFQSGDMEQSAKCFQ 306
T L++S RL VL+ + + D IG +LGIAY G + ++ CFQ
Sbjct: 114 QTWAETLIQSQRLDE---VLTLYAQAELYDLDLIGAKDYSDLGIAYINQGKVIEAITCFQ 170
Query: 307 DLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLA---A 363
I ++ A A N G A L Q N KE L++ A
Sbjct: 171 KSISIQPSY-------------------ASAHCNLG-NALLQQ----NNYKEALISFYEA 206
Query: 364 LKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 402
L DP+ A ++ NL H + C E A L P
Sbjct: 207 LSIDPEFAEVYFNLGITLTKINRHDEAIACFEAALSLNP 245
>gi|375131877|ref|YP_004993977.1| TPR repeat protein [Vibrio furnissii NCTC 11218]
gi|315181051|gb|ADT87965.1| TPR repeat protein [Vibrio furnissii NCTC 11218]
Length = 352
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 72/148 (48%), Gaps = 10/148 (6%)
Query: 253 TLGLILLKSGRLQSSISVLSSLLAVD--PNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 310
T+G I G L+ +S + LLA+D PNN + LG Y + GD+EQ F I
Sbjct: 90 TIGRIHQSRGNLE--LSEKAYLLALDANPNNIKVLQQLGSNYTKQGDVEQGESYFIRAIN 147
Query: 311 KDQNHPAAL----INYAALLLCKYGSV--LAGAGANTGEGACLDQASAVNVAKECLLAAL 364
DQ A+ +N ++ + S + A A G G D + +VAK AL
Sbjct: 148 ADQLRLASREKLALNSVSITAIEQLSSDNQSPALAYMGLGILYDVKAKHHVAKAFYQHAL 207
Query: 365 KADPKAAHIWANLANAYYLTGDHRSSGK 392
K +PK++ N+ +YY++G++ ++ +
Sbjct: 208 KIEPKSSKALMNMGYSYYMSGEYDNAKR 235
>gi|392338478|ref|XP_001059136.2| PREDICTED: tetratricopeptide repeat protein 37 [Rattus norvegicus]
gi|392345221|ref|XP_226606.5| PREDICTED: tetratricopeptide repeat protein 37 [Rattus norvegicus]
Length = 1563
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 45/92 (48%), Gaps = 2/92 (2%)
Query: 216 SGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTL--GLILLKSGRLQSSISVLSS 273
SG ++D +E E+ E L+ L Q + A W L GL LK+G +++ L +
Sbjct: 530 SGAAAVDLSVELEDTETALAILTAVTQKASSGAAKWAWLRRGLYYLKAGHHSQAVADLQA 589
Query: 274 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCF 305
L DP +C+C +LG AY G + K F
Sbjct: 590 ALRADPKDCNCWESLGEAYLSRGSYTTALKSF 621
Score = 38.5 bits (88), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 31/53 (58%)
Query: 360 LLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVA 412
L AAL+ADPK + W +L AY G + ++ K +A++L P+ + + VA
Sbjct: 587 LQAALRADPKDCNCWESLGEAYLSRGSYTTALKSFTRASELSPDSTYSVFKVA 639
>gi|333982592|ref|YP_004511802.1| type 12 methyltransferase [Methylomonas methanica MC09]
gi|333806633|gb|AEF99302.1| Methyltransferase type 12 [Methylomonas methanica MC09]
Length = 449
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 60/149 (40%), Gaps = 21/149 (14%)
Query: 254 LGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQ 313
G++ + G + + + L V PN D +LG Y Q G E + +CF+ I
Sbjct: 60 FGMLRNQLGFAEEGVEYIKKALQVAPNYIDAENSLGNIYLQIGQPELAEQCFRRTI---- 115
Query: 314 NHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHI 373
+ A A AN G L + A++ LL A++ +P AH
Sbjct: 116 ---------------ELNPRFASAYANL--GIALKELGRAIEAEDFLLQAIRYEPDVAHH 158
Query: 374 WANLANAYYLTGDHRSSGKCLEKAAKLEP 402
+ NL N Y G + + EKA ++ P
Sbjct: 159 YQNLGNVYRNLGRYDDAVALYEKAIQMHP 187
>gi|225871875|ref|YP_002753329.1| non-specific serine/threonine protein kinase [Acidobacterium
capsulatum ATCC 51196]
gi|225792350|gb|ACO32440.1| non-specific serine/threonine protein kinase [Acidobacterium
capsulatum ATCC 51196]
Length = 877
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 66/155 (42%), Gaps = 21/155 (13%)
Query: 234 LSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYF 293
L + + +MQ D R A + L + +GR Q + + + P++ D LG+ Y
Sbjct: 594 LEQFQRAMQLDPRNADALDGLARVHENAGRFQDAKAEFVRAANLQPDSWDGYNALGMFYD 653
Query: 294 QSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAV 353
+ G Q+ +Q ++ L+N LAGA + G+ A L +A +
Sbjct: 654 RQGKYPQAIAAYQSARAITPDNATVLLN------------LAGAYEDQGDPASLHKAEGL 701
Query: 354 NVAKECLLAALKADPKAAHIWANLANAYYLTGDHR 388
L +L P A WANL N YYL +HR
Sbjct: 702 ------LRRSLALHPTYAG-WANLGNLYYL--EHR 727
>gi|218438243|ref|YP_002376572.1| hypothetical protein PCC7424_1257 [Cyanothece sp. PCC 7424]
gi|218170971|gb|ACK69704.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 7424]
Length = 237
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 68/153 (44%), Gaps = 23/153 (15%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 213
PKN A+F G +Y +L KA++ Y+KA E PEL+
Sbjct: 82 PKNVDAYFNRGFVYSQLKDFPKALADYQKALEF---------EPELVE------------ 120
Query: 214 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 273
+ N + LE E+ ++ ++ E+++ + +A N L L G + + L+
Sbjct: 121 --AYINRGNVYLELEDYQKAITDYTEALKFNPDEAFAHNNLALAYFNLGNPERAKLELTK 178
Query: 274 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQ 306
+ +DP + N G+ +F+ GD +++ FQ
Sbjct: 179 AVELDPAYGEAYFNRGLVFFELGDEQKARADFQ 211
Score = 42.4 bits (98), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 63/157 (40%), Gaps = 25/157 (15%)
Query: 248 AVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQD 307
AV W G+ ++G Q +I + + +DP N D N G Y Q
Sbjct: 51 AVNWVEQGIDKTETGHYQQAIENFNQAIILDPKNVDAYFNRGFVYSQ------------- 97
Query: 308 LILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGA--CLDQASAVNVAKECLLAALK 365
LKD P AL +Y L ++ L A N G D A+ E ALK
Sbjct: 98 --LKD--FPKALADYQKAL--EFEPELVEAYINRGNVYLELEDYQKAITDYTE----ALK 147
Query: 366 ADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 402
+P A NLA AY+ G+ + L KA +L+P
Sbjct: 148 FNPDEAFAHNNLALAYFNLGNPERAKLELTKAVELDP 184
>gi|118381868|ref|XP_001024094.1| TPR Domain containing protein [Tetrahymena thermophila]
gi|89305861|gb|EAS03849.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
Length = 850
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 82/201 (40%), Gaps = 38/201 (18%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 213
PK +A+ +GL Q+LGQ +A+ Y+KA I + L+ ++ + +L
Sbjct: 204 PKFTNAYINVGLTLQQLGQNQEAIQHYDKA--------IQIDKNAFLA----YYNKAILC 251
Query: 214 ESSGDN-----SLDK--ELEPE----------------ELEEILSKLKESMQSDTRQAVV 250
+ G N + +K E+ P + EE + + +Q D V
Sbjct: 252 KQLGKNQEALNNYNKVIEINPNYSNAYLNKGSLFLFSGKYEEAIKNYDKVIQLDPNHKQV 311
Query: 251 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 310
+ G+ L GR Q SI + + +DPNNC N G+A G + + C+ I
Sbjct: 312 YYNKGISLKALGRYQESIENYNKAIQLDPNNCKIQNNKGLALEALGKSQDALDCYNKAIQ 371
Query: 311 KDQNHPAALINYAALLLCKYG 331
D P ++YA L +
Sbjct: 372 ID---PFFTLSYANRALVNFN 389
Score = 45.4 bits (106), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 59/279 (21%), Positives = 114/279 (40%), Gaps = 45/279 (16%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 213
P AH GL + L Q +A++++ KA L+C+ + L+ I + L
Sbjct: 102 PNYKQAHLNKGLCFFNLNQFQEALNNFNKA----LQCDPKYS----LACYNIALSYQKLG 153
Query: 214 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 273
+S ++ L+ +++ D + GL+ + G+ Q ++
Sbjct: 154 QS---------------QQALTYYDKAINLDPNYKNAYLNRGLLYMNEGQKQQALQDFRQ 198
Query: 274 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSV 333
++A+DP + N+G+ Q G +++ + + I D+N A L Y +LCK
Sbjct: 199 IIAIDPKFTNAYINVGLTLQQLGQNQEAIQHYDKAIQIDKN--AFLAYYNKAILCK---- 252
Query: 334 LAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKC 393
G N Q + N K ++ +P ++ + N + + +G + + K
Sbjct: 253 --QLGKN--------QEALNNYNK-----VIEINPNYSNAYLNKGSLFLFSGKYEEAIKN 297
Query: 394 LEKAAKLEPNCMSTRYAVAVSRIKDAERSQEPTEQLSWA 432
+K +L+PN Y +S +K R QE E + A
Sbjct: 298 YDKVIQLDPNHKQVYYNKGIS-LKALGRYQESIENYNKA 335
Score = 43.1 bits (100), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 69/366 (18%), Positives = 144/366 (39%), Gaps = 46/366 (12%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCL-- 211
PK + A + + L YQ+LGQ +A++ Y+KA + + LL + + Q L
Sbjct: 136 PKYSLACYNIALSYQKLGQSQQALTYYDKAINLDPNYKNAYLNRGLLYMNEGQKQQALQD 195
Query: 212 ------LPESSGDNSLDKELEPEEL---EEILSKLKESMQSDTRQAVVWNTLGLILLKSG 262
+ + ++ L ++L +E + +++Q D + + ++ + G
Sbjct: 196 FRQIIAIDPKFTNAYINVGLTLQQLGQNQEAIQHYDKAIQIDKNAFLAYYNKAILCKQLG 255
Query: 263 RLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINY 322
+ Q +++ + ++ ++PN + N G + SG E++ K + +I D NH N
Sbjct: 256 KNQEALNNYNKVIEINPNYSNAYLNKGSLFLFSGKYEEAIKNYDKVIQLDPNHKQVYYNK 315
Query: 323 AALL--LCKYGSVLAGAGA-----------NTGEGACLDQASAVNVAKECLLAALKADPK 369
L L +Y + +G L+ A +C A++ DP
Sbjct: 316 GISLKALGRYQESIENYNKAIQLDPNNCKIQNNKGLALEALGKSQDALDCYNKAIQIDPF 375
Query: 370 AAHIWANLANAYYLTGDHRSSGKCLEKAAK-LEPNCMSTRYAVAVSRIKDA--------- 419
+AN A + G+ + + +++A+K LE + ++ IK+
Sbjct: 376 FTLSYANRALVNFNLGNKDQAVEDMKQASKLLEQGHLKDMSQQNINHIKNTIQKLNEIEQ 435
Query: 420 ------------ERSQEPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFAAVQKTHHEV 467
+ +QE E++ N+ S+L+E Q +A A+ +K
Sbjct: 436 QGSEILKKTDQLQGNQEEKEKVQKIANDFVSLLKEKAKKQAIQDVAQITRASEEKNDSNS 495
Query: 468 AAAFET 473
+ F+
Sbjct: 496 STQFDN 501
>gi|289548835|ref|YP_003473823.1| hypothetical protein Thal_1064 [Thermocrinis albus DSM 14484]
gi|289182452|gb|ADC89696.1| Tetratricopeptide TPR_2 repeat protein [Thermocrinis albus DSM
14484]
Length = 538
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 70/315 (22%), Positives = 124/315 (39%), Gaps = 56/315 (17%)
Query: 147 VHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEK---------------AEEILLRCE 191
+ ++ PK A+ L +Y G+ KA+S+ E+ A+E + R +
Sbjct: 68 LEFRKQYPKLPEAYLTLHSVYSVRGEQHKAMSALEEGYRVVPDSPQILLLLADEYMRRSQ 127
Query: 192 ADIARPELLSLVQI-------HHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSD 244
D A P L L ++ ++ L + GD ++ + L++S++
Sbjct: 128 YDKATPLLQRLSELNPQNPLPYYLLARLYMAQGDQ-----------KKAIEYLEKSLRVK 176
Query: 245 TRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKC 304
+ TLG + G L + ++ S+L DPNN + L Y SG E++ +
Sbjct: 177 PTFEAGFITLGGLYESRGELSKAETLYKSILEKDPNNRVALERLASLYASSGRWEEAKET 236
Query: 305 FQDLILKDQNHPAALINY-AALLLCK---YGSVLA-----------GAGANTGEGACLDQ 349
++ LI +P + Y AL+L K Y L N G L+
Sbjct: 237 YRKLI---DLYPDSGYQYQYALVLIKASQYEEALQVLSELRQKNKDDLQVNFTYGVVLEL 293
Query: 350 ASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRY 409
AK+ L+ DP I LA Y GD+ + + +K K++P+ +
Sbjct: 294 LKRTEEAKKVYEELLQKDPNNVRIMERLAGVYADLGDYTKAEETAQKVLKIDPSNYNMLL 353
Query: 410 AVA-----VSRIKDA 419
+A +R++DA
Sbjct: 354 LMAHLLSETNRLQDA 368
>gi|148705169|gb|EDL37116.1| mCG116369 [Mus musculus]
Length = 1595
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 46/92 (50%), Gaps = 2/92 (2%)
Query: 216 SGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTL--GLILLKSGRLQSSISVLSS 273
SG ++D LE E+ E L+ L Q + A W L GL LK+G+ +++ L +
Sbjct: 562 SGAAAVDLSLELEDTETALAILTAVTQKASAGAAKWAWLRRGLYHLKAGQHSQAVADLQA 621
Query: 274 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCF 305
L DP +C+C +LG AY G + K F
Sbjct: 622 ALRADPKDCNCWESLGEAYLSRGGYTTALKSF 653
Score = 38.9 bits (89), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 31/53 (58%)
Query: 360 LLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVA 412
L AAL+ADPK + W +L AY G + ++ K KA++L P+ + + VA
Sbjct: 619 LQAALRADPKDCNCWESLGEAYLSRGGYTTALKSFMKASELNPDSTYSVFKVA 671
>gi|94969466|ref|YP_591514.1| hypothetical protein Acid345_2439 [Candidatus Koribacter versatilis
Ellin345]
gi|94551516|gb|ABF41440.1| Tetratricopeptide repeat protein [Candidatus Koribacter versatilis
Ellin345]
Length = 448
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 66/174 (37%), Gaps = 23/174 (13%)
Query: 211 LLPESS-GDNSLDKELEPE-ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSI 268
L PE + NSL + L E + E+ +++++ A +N LG LLK G+ +I
Sbjct: 98 LAPEDAVAHNSLGRTLFHEGKYEDSAGSYRKAIEIHDDYAEAYNGLGAALLKLGKTDEAI 157
Query: 269 SVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLC 328
S + DP N D + N G A + + + + + P L NYA
Sbjct: 158 GAFQSAASKDPKNVDALSNAGAALLHAQKAQDALPYLEKAKALKPDAPDVLENYA----- 212
Query: 329 KYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYY 382
L Q N A ALK DPK+A WA L Y
Sbjct: 213 ----------------NALQQLGRTNEAITEYEKALKGDPKSAVAWAQLGQTQY 250
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 77/187 (41%), Gaps = 27/187 (14%)
Query: 237 LKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSG 296
+S+ D Q V LG + G+ + ++ LA+ P+N D + NLG AY
Sbjct: 262 FNKSLHLDAHQPEVLFLLGAAYTEQGKSKEAMHSYEKGLALKPDNPDGLYNLGHAY---- 317
Query: 297 DMEQSAKCFQDLILKDQNHPAALINYAALLLCK--YGSVLAGAGANTGEGACLDQASAVN 354
+ +P A+ +Y L + + LAG GA LD A
Sbjct: 318 -------------ETQKEYPRAIDSYQKALAARPEFTHALAGLGACQLASNKLDDA---- 360
Query: 355 VAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVS 414
+A L +++D I N A A + G+ + + + +A KL+P+ Y + +S
Sbjct: 361 IATYRKLVPMQSDDPG--IRFNFATALFNKGNFKEAAENYREAVKLKPDFAHAHYNLGMS 418
Query: 415 --RIKDA 419
R+ DA
Sbjct: 419 LLRLNDA 425
>gi|418735677|ref|ZP_13292087.1| tetratricopeptide repeat protein [Leptospira borgpetersenii serovar
Castellonis str. 200801910]
gi|410748811|gb|EKR01705.1| tetratricopeptide repeat protein [Leptospira borgpetersenii serovar
Castellonis str. 200801910]
Length = 1197
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/169 (17%), Positives = 75/169 (44%), Gaps = 23/169 (13%)
Query: 135 REEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADI 194
R+ ++ ++G + K P + ++H+ +G+++ + + ++ S++++ L D
Sbjct: 688 RKGEIDKAESGFKEILAKKPDSYYSHYQMGIIHLQRKKYEASIDSFDRS----LLLNTDF 743
Query: 195 ARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTL 254
+ + ++H SG+ L KE + + +MQ D+ + +
Sbjct: 744 VAARIGKGISMYH--------SGNKKLAKE-----------EFETAMQQDSANELAPYNI 784
Query: 255 GLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAK 303
G+IL +I++ ++ +P D + Y++ GD+EQ+ K
Sbjct: 785 GIILFNDNLYNEAIAIFKEIIQKNPEFSDAHYQISYIYYKRGDLEQAEK 833
>gi|421095316|ref|ZP_15556029.1| tetratricopeptide repeat protein [Leptospira borgpetersenii str.
200801926]
gi|410362026|gb|EKP13066.1| tetratricopeptide repeat protein [Leptospira borgpetersenii str.
200801926]
Length = 1197
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/169 (17%), Positives = 75/169 (44%), Gaps = 23/169 (13%)
Query: 135 REEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADI 194
R+ ++ ++G + K P + ++H+ +G+++ + + ++ S++++ L D
Sbjct: 688 RKGEIDKAESGFKEILAKKPDSYYSHYQMGIIHLQRKKYEASIDSFDRS----LLLNTDF 743
Query: 195 ARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTL 254
+ + ++H SG+ L KE + + +MQ D+ + +
Sbjct: 744 VAARIGKGISMYH--------SGNKKLAKE-----------EFETAMQQDSANELAPYNI 784
Query: 255 GLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAK 303
G+IL +I++ ++ +P D + Y++ GD+EQ+ K
Sbjct: 785 GIILFNDNLYNEAIAIFKEIIQKNPEFSDAHYQISYIYYKRGDLEQAEK 833
>gi|165923888|ref|ZP_02219720.1| tetratricopeptide repeat protein/methyltransferase [Coxiella
burnetii Q321]
gi|165916673|gb|EDR35277.1| tetratricopeptide repeat protein/methyltransferase [Coxiella
burnetii Q321]
Length = 561
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 47/223 (21%), Positives = 90/223 (40%), Gaps = 31/223 (13%)
Query: 225 LEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDC 284
+E E + +++LK ++ + + ++ L + + G +I+ LA++P N D
Sbjct: 149 IELENYHQAIAELKRTVAMSSHHSAAFSQLAHVYMYLGDFSKAITYYEKRLALEPENADA 208
Query: 285 IGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEG 344
+ G+A+ + +++ F + +L + HP C Y LA A G+
Sbjct: 209 QYDCGLAHLKDNQFQKAIDYFTNALLLNPEHPD----------CHYS--LATAYLQRGDH 256
Query: 345 ACLDQASAVNVAKECLLAALKADPKAAHI--WANLANAYYLTGDHRSSGKCLEKAAKLEP 402
KE L+ L+ K I + N+ + HR + ++A L+P
Sbjct: 257 ------------KEALIHYLRQLEKKPQIECYYNVGVLHMYQERHREAIDYFKQALTLDP 304
Query: 403 NCMSTRYAVA-----VSRIKDAERSQEPTEQLSWAGNEMASIL 440
N +A +++IK A E T L +E+ IL
Sbjct: 305 NYREAHLNIAAVYLKINQIKQAIEHYESTLVLKPNDSEIEHIL 347
>gi|312110112|ref|YP_003988428.1| hypothetical protein GY4MC1_1005 [Geobacillus sp. Y4.1MC1]
gi|336234537|ref|YP_004587153.1| hypothetical protein Geoth_1075 [Geobacillus thermoglucosidasius
C56-YS93]
gi|423719149|ref|ZP_17693331.1| tetratricopeptide repeat family protein [Geobacillus
thermoglucosidans TNO-09.020]
gi|311215213|gb|ADP73817.1| Tetratricopeptide TPR_1 repeat-containing protein [Geobacillus sp.
Y4.1MC1]
gi|335361392|gb|AEH47072.1| Tetratricopeptide TPR_2 repeat-containing protein [Geobacillus
thermoglucosidasius C56-YS93]
gi|383368052|gb|EID45327.1| tetratricopeptide repeat family protein [Geobacillus
thermoglucosidans TNO-09.020]
Length = 220
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 51/109 (46%), Gaps = 21/109 (19%)
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLD 348
GIAY Q G+ E++ KCF D I ++ N P IN +G+VLA AG +
Sbjct: 8 GIAYMQKGNYEEAIKCFHDAIEENPNDPVGYIN--------FGTVLAAAG---------E 50
Query: 349 QASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKA 397
+ A+N K+ A++ D AA + + + +Y + E+A
Sbjct: 51 EEKALNFFKK----AIELDSNAAAAYYGMGSVFYKRQQFAQAKDMFEQA 95
>gi|153207820|ref|ZP_01946420.1| tetratricopeptide repeat protein/methyltransferase [Coxiella
burnetii 'MSU Goat Q177']
gi|212218831|ref|YP_002305618.1| tetratricopeptide repeat family protein [Coxiella burnetii
CbuK_Q154]
gi|120576372|gb|EAX32996.1| tetratricopeptide repeat protein/methyltransferase [Coxiella
burnetii 'MSU Goat Q177']
gi|212013093|gb|ACJ20473.1| tetratricopeptide repeat family protein [Coxiella burnetii
CbuK_Q154]
Length = 561
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 47/223 (21%), Positives = 90/223 (40%), Gaps = 31/223 (13%)
Query: 225 LEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDC 284
+E E + +++LK ++ + + ++ L + + G +I+ LA++P N D
Sbjct: 149 IELENYHQAIAELKRTVAMSSHHSAAFSQLAHVYMYLGDFSKAITYYEKRLALEPENADA 208
Query: 285 IGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEG 344
+ G+A+ + +++ F + +L + HP C Y LA A G+
Sbjct: 209 QYDCGLAHLKDNQFQKAIDYFTNALLLNPEHPD----------CHYS--LATAYLQRGDH 256
Query: 345 ACLDQASAVNVAKECLLAALKADPKAAHI--WANLANAYYLTGDHRSSGKCLEKAAKLEP 402
KE L+ L+ K I + N+ + HR + ++A L+P
Sbjct: 257 ------------KEALIHYLRQLEKKPQIECYYNVGVLHMYQERHREAIDYFKQALTLDP 304
Query: 403 NCMSTRYAVA-----VSRIKDAERSQEPTEQLSWAGNEMASIL 440
N +A +++IK A E T L +E+ IL
Sbjct: 305 NYREAHLNIAAVYLKINQIKQAIEHYESTLVLKPNDSEIEHIL 347
>gi|110289194|gb|ABG66115.1| tetratricopeptide repeat, putative, expressed [Oryza sativa
Japonica Group]
Length = 271
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 63/135 (46%)
Query: 184 EEILLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQS 243
++L+R E D++ EL V+ A G L ++ P ++ + +++ +
Sbjct: 113 RQVLVRRELDLSAKELQEQVRSGDASATEYFELGAVMLRRKFYPAAIKYLQQAIQKWDRD 172
Query: 244 DTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAK 303
+ A V+N LG+ + +L SI + + P NLG AY Q D++ + K
Sbjct: 173 EQDLAQVYNALGVSYKRDNKLDKSIQQFEKAVELQPGYVTAWNNLGDAYEQKKDLKSALK 232
Query: 304 CFQDLILKDQNHPAA 318
F++++L D N+ A
Sbjct: 233 AFEEVLLFDPNNTVA 247
>gi|340623460|ref|YP_004741913.1| hypothetical protein GYY_01415 [Methanococcus maripaludis X1]
gi|339903728|gb|AEK19170.1| hypothetical protein GYY_01415 [Methanococcus maripaludis X1]
Length = 344
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 45/216 (20%), Positives = 75/216 (34%), Gaps = 47/216 (21%)
Query: 234 LSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYF 293
L +S+ ++ + W G+ L +I ++++ N D N G A F
Sbjct: 113 LEMYDKSLNINSENSEAWKNKGITLTNMQSYSEAIECFDKSISINAKNSDVWYNKGEAQF 172
Query: 294 QSGDMEQSAKCFQDLILKDQNHPAALI----------NYAALLLC--------------- 328
+ G E+S + +L D+ AL+ NY + + C
Sbjct: 173 KLGQYEKSIDSYNKALLIDEKMETALLGKGNSYLKLQNYESAIECFNTAETINPKSEYPP 232
Query: 329 ------------------KYGSVL----AGAGANTGEGACLDQASAVNVAKECLLAALKA 366
Y L + A +G C D+ + A A++
Sbjct: 233 YYKADAYRDTENFEDALKYYDEALEINPSNADVLINKGICFDKMKNYSAAISNFDLAIQI 292
Query: 367 DPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 402
DPK IW N+Y D+ SS C +KA ++EP
Sbjct: 293 DPKNVQIWILKGNSYVGLKDYESSISCYKKALEIEP 328
Score = 42.0 bits (97), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 66/310 (21%), Positives = 111/310 (35%), Gaps = 25/310 (8%)
Query: 251 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 310
+N GL L G SIS + L +P + + N G + + G +S +CF +L
Sbjct: 28 YNDKGLELYNQGNYVDSISEYNLALLENPKSAEIWVNKGNSLLKLGIYGESRECFNKALL 87
Query: 311 KDQNHPAALINYAALLLCKYGSVLA--------------GAGANTGEGACLDQASAVNVA 356
D + A N +L K G+ + A +G L + + A
Sbjct: 88 IDSENSEAF-NGLGTVLSKTGNYQKALEMYDKSLNINSENSEAWKNKGITLTNMQSYSEA 146
Query: 357 KECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRI 416
EC ++ + K + +W N A + G + S KA ++ + S +
Sbjct: 147 IECFDKSISINAKNSDVWYNKGEAQFKLGQYEKSIDSYNKALLIDEKMETALLGKGNSYL 206
Query: 417 KDAERSQEPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFAAVQKTHHEVAAAFETEEN 476
K + + E + A +P PP A A + E A + E
Sbjct: 207 K-LQNYESAIECFNTA--------ETINPKSEYPPYYKAD-AYRDTENFEDALKYYDEAL 256
Query: 477 ELSKMEECAGAGESAFLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSS 536
E++ + D+ + A A++ DPK IW N+Y D+ SS
Sbjct: 257 EINPSNADVLINKGICFDKMKNYSAAISNFDLAIQIDPKNVQIWILKGNSYVGLKDYESS 316
Query: 537 GKCLEKVLMV 546
C +K L +
Sbjct: 317 ISCYKKALEI 326
>gi|390949282|ref|YP_006413041.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Thiocystis violascens DSM 198]
gi|390425851|gb|AFL72916.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Thiocystis violascens DSM 198]
Length = 883
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 114/289 (39%), Gaps = 53/289 (18%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELL------------- 200
P +A LG YQ + AV SY KA EI ++D PE+
Sbjct: 197 PGDAETLNSLGRAYQSQQRLEDAVDSYRKALEI----QSD--SPEIWNNLGISQQSQGYP 250
Query: 201 --SLVQIHHAQCLLPES-SGDNSLDKEL-EPEELEEILSKLKESMQSDTRQAVVWNTLGL 256
+L A L P+ NS + L E +EE L+ ++ D + A N GL
Sbjct: 251 NQALASFERALTLQPDYVKAHNSRGRALRELGRVEEALACHDRALNLDPKNADAHNNRGL 310
Query: 257 ILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHP 316
L+ GR+ +I+ + L + P + D + LG+A G +++ C++ + +
Sbjct: 311 TLMLLGRIGEAIASYTQALLLRPEDADTLIVLGLALSDVGRFDEALTCYKHALAIAPDSV 370
Query: 317 AALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWAN 376
A +N G + G + AC DQ AL DP A W+N
Sbjct: 371 PAYVN--------QGISMHYLGRDDTALACFDQ-------------ALSIDPDAIEAWSN 409
Query: 377 LANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSR----IKDAER 421
G + L +A +++P+ +A+A++ +KD +R
Sbjct: 410 RGIVMQHLGRKEEALTALNRALEIKPD-----FAMALNNRGNVLKDQDR 453
>gi|149918347|ref|ZP_01906838.1| tetratricopeptide repeat protein [Plesiocystis pacifica SIR-1]
gi|149820873|gb|EDM80282.1| tetratricopeptide repeat protein [Plesiocystis pacifica SIR-1]
Length = 478
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 77/193 (39%), Gaps = 29/193 (15%)
Query: 250 VWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLI 309
+N +G L++G+ + S D N NLG+ Y GD + + CF
Sbjct: 185 AYNLMGFAYLQAGKRVDAFRSFKSAAETDDKNASAWNNLGVQYMWRGDPKTAESCF---- 240
Query: 310 LKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPK 369
+YAA L K+ A A+ GA L + A+ +A K P
Sbjct: 241 -----------SYAAELDPKF------AEAHLNHGASLRANGKLTEAELAFNSAAKLRPD 283
Query: 370 AAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST--RYAVAVSRIKDA-ERSQEPT 426
A + NL YL D + ++ AKLE C+ RY V + K + ERS + +
Sbjct: 284 WAEVQFNLG-VLYLDADQIGT---FDEIAKLE-ACIKAFERYKSLVGQGKSSLERSTKQS 338
Query: 427 EQLSWAGNEMASI 439
GNE+ S+
Sbjct: 339 GPTDAMGNELVSV 351
>gi|371777955|ref|ZP_09484277.1| hypothetical protein AnHS1_11097 [Anaerophaga sp. HS1]
Length = 707
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 88/214 (41%), Gaps = 22/214 (10%)
Query: 204 QIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGR 263
QI A+ L E +L K E+ L+ E+++ + +N G++ K +
Sbjct: 50 QIIKAKPFLAEPYFYRALGKYY-LEDFNGALNDCNEALKRNPYLVDAYNLRGILYQKLNK 108
Query: 264 LQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYA 323
++S++ L VDP N + + NLGIAY Q+ +++ + + D++ N A +N
Sbjct: 109 PEASVTDFKQGLKVDPLNVNLLINLGIAYIQTEQYDKAIETYSDVLKLSPNLIRAYLNRG 168
Query: 324 ALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYL 383
LA A GA D + A++V +P + N + Y
Sbjct: 169 ----------LAKFSAQDTSGALEDFSKAIDV-----------NPYIPDGYVNRSMIQYY 207
Query: 384 TGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIK 417
D + + +A KL P+ S A+ R +
Sbjct: 208 KSDFEGALSDINEAIKLRPDESSFYMNRAIIRYQ 241
>gi|256422077|ref|YP_003122730.1| hypothetical protein Cpin_3056 [Chitinophaga pinensis DSM 2588]
gi|256036985|gb|ACU60529.1| TPR repeat-containing protein [Chitinophaga pinensis DSM 2588]
Length = 543
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 82/183 (44%), Gaps = 13/183 (7%)
Query: 234 LSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYF 293
++ ++ D + ++ G + +++ +L+S+I+ LS+ + +DP+ N G+AY+
Sbjct: 329 IADFTSAITLDPQSSLALGYRGALYIETKQLESAIADLSAAIKIDPDALQHYYNRGLAYY 388
Query: 294 QSGDMEQSAKCFQDLILKDQNHPAA---------LINYAALLLCKYGSVLAGAGANTGEG 344
Q G E + F LI K + A +N AL + + A
Sbjct: 389 QWGAYEPAIADFTTLITKGPPNAVAYRYRGNLYTYVNKPALAIADISKAIDLAPKEAESY 448
Query: 345 ACLDQASAVNV----AKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKL 400
A A A+ A + ++K DP + I+ N A AY +++++ K +A +L
Sbjct: 449 AVRGLAYALQADYKQAVQDFSTSIKLDPGSKTIYVNRALAYKYLNNYKAAIKDYTQAIEL 508
Query: 401 EPN 403
+PN
Sbjct: 509 DPN 511
>gi|380019747|ref|XP_003693764.1| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit-like
isoform 1 [Apis florea]
Length = 1095
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 64/155 (41%), Gaps = 21/155 (13%)
Query: 251 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 310
++ LG + + G+LQ ++ + + P+ D NL A +GDMEQ+ + +
Sbjct: 141 YSNLGNVFKERGQLQEALENYRHAVRLKPDFIDGYINLAAALVAAGDMEQAVQAY----- 195
Query: 311 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 370
+ Y L C + G L + ++ AK C L A++ P
Sbjct: 196 ------VTALQYNPDLYC----------VRSDLGNLLKALARLDEAKACYLKAIETRPDF 239
Query: 371 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 405
A W+NL + G+ + EKA L+PN +
Sbjct: 240 AVAWSNLGCVFNAQGEIWLAIHHFEKAVALDPNFL 274
Score = 40.0 bits (92), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 125/306 (40%), Gaps = 57/306 (18%)
Query: 248 AVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQD 307
AV W+ LG + G + +I +A+DPN D AY G++ + A+ F
Sbjct: 240 AVAWSNLGCVFNAQGEIWLAIHHFEKAVALDPNFLD-------AYINLGNVLKEARIFDR 292
Query: 308 LILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL-DQASAVNVAKECLLAALKA 366
+ AA + AL L +V+ G AC+ + +++A + A++
Sbjct: 293 AV-------AAYLR--ALNLSPNNAVV------HGNLACVYYEQGLIDLAIDTYRRAIEL 337
Query: 367 DPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVA-VSR----IKDAER 421
P + NLANA G + C A +L P+ + +A + R I++A R
Sbjct: 338 QPNFPDAYCNLANALKEKGQVVEAEDCYNTALRLCPSHADSLNNLANIKREQGYIEEATR 397
Query: 422 ----SQEPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFAAVQKTHHEVAAAFETEENE 477
+ E + + A + +AS+L++ + E + + +Q T A A+ N
Sbjct: 398 LYLKALEVFPEFAAAHSNLASVLQQQGKLN-EALMHYKEAIRIQPT---FADAYSNMGNT 453
Query: 478 LSKMEECAGAGESAFLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSG 537
L +M++ G A +C A++ +P A +NLA+ H+ SG
Sbjct: 454 LKEMQDIQG---------------ALQCYTRAIQINPAFADAHSNLASI------HKDSG 492
Query: 538 KCLEKV 543
E +
Sbjct: 493 NIPEAI 498
>gi|163794023|ref|ZP_02187996.1| TPR repeat [alpha proteobacterium BAL199]
gi|159180637|gb|EDP65156.1| TPR repeat [alpha proteobacterium BAL199]
Length = 619
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 64/150 (42%), Gaps = 21/150 (14%)
Query: 254 LGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQ 313
LG I L+ G + ++ ++ +A+ P + +GNLG+ Y + ++ CF+ + +
Sbjct: 43 LGTIALRGGEVSRALELIGHAVAIAPTDGMTVGNLGVVYLAQNKLIEAEDCFRRALDLEP 102
Query: 314 NHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHI 373
+ P N+A+ LL + E A Q AV++A + AA
Sbjct: 103 SQPELHANFASTLLAR----------GDRETALKAQRRAVDLASD----------SAAQR 142
Query: 374 WANLANAYYLTGDHRSSGKCLEKAAKLEPN 403
+ NL N G + E A ++EPN
Sbjct: 143 F-NLGNVLVAVGRSAEGAEAYESALEIEPN 171
>gi|110760723|ref|XP_623820.2| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit isoform
2 [Apis mellifera]
Length = 1095
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 64/155 (41%), Gaps = 21/155 (13%)
Query: 251 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 310
++ LG + + G+LQ ++ + + P+ D NL A +GDMEQ+ + +
Sbjct: 141 YSNLGNVFKERGQLQEALENYRHAVRLKPDFIDGYINLAAALVAAGDMEQAVQAY----- 195
Query: 311 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 370
+ Y L C + G L + ++ AK C L A++ P
Sbjct: 196 ------VTALQYNPDLYC----------VRSDLGNLLKALARLDEAKACYLKAIETRPDF 239
Query: 371 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 405
A W+NL + G+ + EKA L+PN +
Sbjct: 240 AVAWSNLGCVFNAQGEIWLAIHHFEKAVALDPNFL 274
Score = 39.7 bits (91), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 125/306 (40%), Gaps = 57/306 (18%)
Query: 248 AVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQD 307
AV W+ LG + G + +I +A+DPN D AY G++ + A+ F
Sbjct: 240 AVAWSNLGCVFNAQGEIWLAIHHFEKAVALDPNFLD-------AYINLGNVLKEARIFDR 292
Query: 308 LILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL-DQASAVNVAKECLLAALKA 366
+ AA + AL L +V+ G AC+ + +++A + A++
Sbjct: 293 AV-------AAYLR--ALNLSPNNAVV------HGNLACVYYEQGLIDLAIDTYRRAIEL 337
Query: 367 DPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVA-VSR----IKDAER 421
P + NLANA G + C A +L P+ + +A + R I++A R
Sbjct: 338 QPNFPDAYCNLANALKEKGQVVEAEDCYNTALRLCPSHADSLNNLANIKREQGYIEEATR 397
Query: 422 ----SQEPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFAAVQKTHHEVAAAFETEENE 477
+ E + + A + +AS+L++ + E + + +Q T A A+ N
Sbjct: 398 LYLKALEVFPEFAAAHSNLASVLQQQGKLN-EALMHYKEAIRIQPT---FADAYSNMGNT 453
Query: 478 LSKMEECAGAGESAFLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSG 537
L +M++ G A +C A++ +P A +NLA+ H+ SG
Sbjct: 454 LKEMQDIQG---------------ALQCYTRAIQINPAFADAHSNLASI------HKDSG 492
Query: 538 KCLEKV 543
E +
Sbjct: 493 NIPEAI 498
>gi|344301498|gb|EGW31810.1| hypothetical protein SPAPADRAFT_56571 [Spathaspora passalidarum
NRRL Y-27907]
Length = 821
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 56/253 (22%), Positives = 107/253 (42%), Gaps = 37/253 (14%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 213
P+N LLG Y L +A ++Y++A L E ++ ++ H +L
Sbjct: 121 PENGDTWGLLGHCYLMLDDLQRAYAAYQRALYYL----------ENPNVPKLWHGIGILY 170
Query: 214 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 273
+ G SL E EE ++ E + ++ LG+I G+LQS++
Sbjct: 171 DRYG--SL------EYAEEAFVRVLELDPHFDKSNEIYFRLGIIYKHQGKLQSALECFQY 222
Query: 274 LLAVDPN---NCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKY 330
+L+ P+ D +G Q D + + ++ ++ + H A +L +
Sbjct: 223 ILSTPPHPLTQPDVWFQIGSVLEQQKDWNGAKEAYEKVLQVNPQH--------AKVLQQL 274
Query: 331 GSVLAGAGAN------TGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLT 384
G + + A +N +G+G L Q +N+A + L +L+ D AH W L + +
Sbjct: 275 GCLYSQAESNPSTPNTSGQGQPLQQD--LNIALKYLTKSLEIDQNDAHSWYYLGRVHMIR 332
Query: 385 GDHRSSGKCLEKA 397
GD ++ + ++A
Sbjct: 333 GDFNAAYEAFQQA 345
>gi|380019749|ref|XP_003693765.1| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit-like
isoform 2 [Apis florea]
Length = 1065
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 64/155 (41%), Gaps = 21/155 (13%)
Query: 251 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 310
++ LG + + G+LQ ++ + + P+ D NL A +GDMEQ+ + +
Sbjct: 111 YSNLGNVFKERGQLQEALENYRHAVRLKPDFIDGYINLAAALVAAGDMEQAVQAY----- 165
Query: 311 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 370
+ Y L C + G L + ++ AK C L A++ P
Sbjct: 166 ------VTALQYNPDLYC----------VRSDLGNLLKALARLDEAKACYLKAIETRPDF 209
Query: 371 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 405
A W+NL + G+ + EKA L+PN +
Sbjct: 210 AVAWSNLGCVFNAQGEIWLAIHHFEKAVALDPNFL 244
Score = 39.7 bits (91), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 125/306 (40%), Gaps = 57/306 (18%)
Query: 248 AVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQD 307
AV W+ LG + G + +I +A+DPN D AY G++ + A+ F
Sbjct: 210 AVAWSNLGCVFNAQGEIWLAIHHFEKAVALDPNFLD-------AYINLGNVLKEARIFDR 262
Query: 308 LILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL-DQASAVNVAKECLLAALKA 366
+ AA + AL L +V+ G AC+ + +++A + A++
Sbjct: 263 AV-------AAYLR--ALNLSPNNAVV------HGNLACVYYEQGLIDLAIDTYRRAIEL 307
Query: 367 DPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVA-VSR----IKDAER 421
P + NLANA G + C A +L P+ + +A + R I++A R
Sbjct: 308 QPNFPDAYCNLANALKEKGQVVEAEDCYNTALRLCPSHADSLNNLANIKREQGYIEEATR 367
Query: 422 ----SQEPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFAAVQKTHHEVAAAFETEENE 477
+ E + + A + +AS+L++ + E + + +Q T A A+ N
Sbjct: 368 LYLKALEVFPEFAAAHSNLASVLQQQGKLN-EALMHYKEAIRIQPT---FADAYSNMGNT 423
Query: 478 LSKMEECAGAGESAFLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSG 537
L +M++ G A +C A++ +P A +NLA+ H+ SG
Sbjct: 424 LKEMQDIQG---------------ALQCYTRAIQINPAFADAHSNLASI------HKDSG 462
Query: 538 KCLEKV 543
E +
Sbjct: 463 NIPEAI 468
>gi|418405031|ref|ZP_12978461.1| TonB-dependent receptor protein [Sinorhizobium meliloti CCNWSX0020]
gi|359501020|gb|EHK73652.1| TonB-dependent receptor protein [Sinorhizobium meliloti CCNWSX0020]
Length = 1192
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 75/175 (42%), Gaps = 21/175 (12%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
+LE L+ L+ ++++ + +WN+LGL+ G +++ + +A+DP + NL
Sbjct: 415 DLEGALADLERALKTAPGSSSIWNSLGLVQGARGDNRAAEAAFKQAIALDPLDPVSHANL 474
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLD 348
I Y M ++ + + D + AL+ G
Sbjct: 475 AIQYMDEMRMAEAKREIDAALSVDPSFDVALV---------------------ARGRYHM 513
Query: 349 QASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 403
Q + A E LLA A+P ++ LA A+Y GD + + L+ A +L+PN
Sbjct: 514 QNGEADKAVEDLLAGSTANPAYSNAQLLLAAAHYEKGDRIPAAQALDNADRLDPN 568
>gi|383784212|ref|YP_005468781.1| TPR-domaincontaining protein [Leptospirillum ferrooxidans C2-3]
gi|383083124|dbj|BAM06651.1| putative TPR-domaincontaining protein [Leptospirillum ferrooxidans
C2-3]
Length = 769
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 109/250 (43%), Gaps = 42/250 (16%)
Query: 149 VARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEI----------LLRCEADIARPE 198
+ ++ P + +FLLG +Y+RL P A+ ++ KAE++ + E D+ R
Sbjct: 392 MIQRFPSSDMGYFLLGDLYRRLENPKAAIKNFLKAEKLAPSKWEIPFSISLAEMDLKR-- 449
Query: 199 LLSLVQ--IHHAQCLLPESS-----GDNSLDKELEPEELEEILSKLKESMQSDTRQAVVW 251
+ Q + A L P+S+ D+ + L++ L+ S+ D + A
Sbjct: 450 -FPVAQKYLSKAMELRPDSAVLYFNRGVLFDQWNHKKYLKQSQRDLERSIALDPKMADAL 508
Query: 252 NTLGLI-LLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 310
N LG ++ +G L ++ ++ L VDP N ++G YF+ G + ++ L
Sbjct: 509 NYLGYTWVVDNGNLIAARYLILRALTVDPKNGSFRDSIGWCYFRMGQIYKA--------L 560
Query: 311 KDQNHPAALINYAALLLCKYGSV-------LAGAGANTGEGACLDQASAV------NVAK 357
++++ L+ + A +L + L+G A + Q++A+ N +K
Sbjct: 561 REESTAYGLMPHDATVLAHLARIEMAVAKDLSGNSTTPRRQAIISQSAAMSSLSQKNFSK 620
Query: 358 ECLLAALKAD 367
E + LK D
Sbjct: 621 EFSIKRLKED 630
>gi|321476570|gb|EFX87530.1| hypothetical protein DAPPUDRAFT_311979 [Daphnia pulex]
Length = 622
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 91/231 (39%), Gaps = 39/231 (16%)
Query: 218 DNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAV 277
+ L K LE +L + + +++ D W LGL L ++ + +I+ LA+
Sbjct: 332 NTGLQKRLE-GDLPSAILLFEAALKKDPEHVKAWEVLGLTLAENEQDPGAITAYKRCLAL 390
Query: 278 DPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHP---------AALINYAALLLC 328
+P N + L ++Y Q+ + +D + +N+P +A +N
Sbjct: 391 EPTNLVAMMGLAVSYTNESYQLQACQALEDWL---RNNPKYGHLTSPSSARVNERER--- 444
Query: 329 KYGSVLAGAGAN-----------------------TGEGACLDQASAVNVAKECLLAALK 365
+ S+++G N TG G L+ + + A +C AAL+
Sbjct: 445 TFTSLVSGDTFNRVQDMYLTAARLQPSQDLDPDVQTGLGVLLNLSGDFDKAPDCFRAALQ 504
Query: 366 ADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRI 416
P + +W L G + + KA +L P + RY +AVS I
Sbjct: 505 MKPNDSLLWNRLGATLANGGKSEEAIESYYKALELSPGFIRARYNLAVSCI 555
>gi|386876076|ref|ZP_10118214.1| tetratricopeptide repeat protein [Candidatus Nitrosopumilus salaria
BD31]
gi|386806122|gb|EIJ65603.1| tetratricopeptide repeat protein [Candidatus Nitrosopumilus salaria
BD31]
Length = 297
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 58/271 (21%), Positives = 101/271 (37%), Gaps = 54/271 (19%)
Query: 255 GLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQN 314
G+ L+ G+ ++ V L +DPNN + N G+A + G +++ +CF I + N
Sbjct: 11 GVALVNQGKYHKALKVYDKALNIDPNNWNVWYNKGVALDELGRNDEALECFNQAIQINPN 70
Query: 315 HPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIW 374
A N G L G N DQ +K DP A W
Sbjct: 71 DAWAWSN--------KGITLGKLGRNDEAVMAFDQ-------------EIKIDPNDAA-W 108
Query: 375 ANLANAYYLTGDHRSSGKCLEKAAKLEPNCMS--TRYAVAVSRI-KDAERSQEPTEQLSW 431
N A G + + +C +A ++ PN +S + + + +I K+ ER
Sbjct: 109 YNRGMALDNLGRNDEALECFNQAIQINPNNLSACVKKDITLDKIGKNVER---------- 158
Query: 432 AGNEMASILREGDPVQIEPPIAWAGFAAVQKTHHEVAAAFE--TEENELSKMEECAGAGE 489
EM + W + ++ A E E ++S+ +
Sbjct: 159 ---EMVRM--------------WTNKGVALEKIDKLNEALECYDEALKISRNYMWPWDNK 201
Query: 490 SAFLDQASAVNVAKECLLAALKADPKAAHIW 520
L++ + +N A EC A++ +P A +W
Sbjct: 202 GIILNKLNRINEALECFNQAIQINPNDATVW 232
Score = 45.1 bits (105), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 73/175 (41%), Gaps = 4/175 (2%)
Query: 231 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 290
+E L +++Q + A W+ G+ L K GR ++ + +DPN+ N G+
Sbjct: 55 DEALECFNQAIQINPNDAWAWSNKGITLGKLGRNDEAVMAFDQEIKIDPNDA-AWYNRGM 113
Query: 291 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGAN--TGEGACLD 348
A G +++ +CF I + N+ +A + + L K G + T +G L+
Sbjct: 114 ALDNLGRNDEALECFNQAIQINPNNLSACVK-KDITLDKIGKNVEREMVRMWTNKGVALE 172
Query: 349 QASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 403
+ +N A EC ALK W N + +C +A ++ PN
Sbjct: 173 KIDKLNEALECYDEALKISRNYMWPWDNKGIILNKLNRINEALECFNQAIQINPN 227
>gi|328777929|ref|XP_003249419.1| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit isoform
1 [Apis mellifera]
Length = 1065
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 64/155 (41%), Gaps = 21/155 (13%)
Query: 251 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 310
++ LG + + G+LQ ++ + + P+ D NL A +GDMEQ+ + +
Sbjct: 111 YSNLGNVFKERGQLQEALENYRHAVRLKPDFIDGYINLAAALVAAGDMEQAVQAY----- 165
Query: 311 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 370
+ Y L C + G L + ++ AK C L A++ P
Sbjct: 166 ------VTALQYNPDLYC----------VRSDLGNLLKALARLDEAKACYLKAIETRPDF 209
Query: 371 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 405
A W+NL + G+ + EKA L+PN +
Sbjct: 210 AVAWSNLGCVFNAQGEIWLAIHHFEKAVALDPNFL 244
Score = 39.7 bits (91), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 125/306 (40%), Gaps = 57/306 (18%)
Query: 248 AVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQD 307
AV W+ LG + G + +I +A+DPN D AY G++ + A+ F
Sbjct: 210 AVAWSNLGCVFNAQGEIWLAIHHFEKAVALDPNFLD-------AYINLGNVLKEARIFDR 262
Query: 308 LILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL-DQASAVNVAKECLLAALKA 366
+ AA + AL L +V+ G AC+ + +++A + A++
Sbjct: 263 AV-------AAYLR--ALNLSPNNAVV------HGNLACVYYEQGLIDLAIDTYRRAIEL 307
Query: 367 DPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVA-VSR----IKDAER 421
P + NLANA G + C A +L P+ + +A + R I++A R
Sbjct: 308 QPNFPDAYCNLANALKEKGQVVEAEDCYNTALRLCPSHADSLNNLANIKREQGYIEEATR 367
Query: 422 ----SQEPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFAAVQKTHHEVAAAFETEENE 477
+ E + + A + +AS+L++ + E + + +Q T A A+ N
Sbjct: 368 LYLKALEVFPEFAAAHSNLASVLQQQGKLN-EALMHYKEAIRIQPT---FADAYSNMGNT 423
Query: 478 LSKMEECAGAGESAFLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSG 537
L +M++ G A +C A++ +P A +NLA+ H+ SG
Sbjct: 424 LKEMQDIQG---------------ALQCYTRAIQINPAFADAHSNLASI------HKDSG 462
Query: 538 KCLEKV 543
E +
Sbjct: 463 NIPEAI 468
>gi|197104847|ref|YP_002130224.1| flagellin modification protein FlmG [Phenylobacterium zucineum
HLK1]
gi|196478267|gb|ACG77795.1| flagellin modification protein FlmG [Phenylobacterium zucineum
HLK1]
Length = 596
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 73/179 (40%), Gaps = 23/179 (12%)
Query: 239 ESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDM 298
++++ D R W LG+ ++G SS++ S L + P++ + +LG ++ G
Sbjct: 80 KALERDERSGFGWYLLGIARERAGDFASSVTAYESALKLLPDHAEIANDLGRLAYRMGMR 139
Query: 299 EQSAKCFQDLILK-DQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAK 357
Q+ K F+ + + +NH GAN A DQ A
Sbjct: 140 TQAEKLFRHFLARHPENH---------------------EGANNLACALRDQ-ERYEEAV 177
Query: 358 ECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRI 416
E L A+ P+ A +W + GD +S +A +L+ + RY + +R+
Sbjct: 178 EVLKPAIIKSPEVAMLWNTMGTVMAEQGDFPTSEVFFREALRLDGDQARPRYNLGNARL 236
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 69/156 (44%), Gaps = 15/156 (9%)
Query: 155 KNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQ---------- 204
++ +LLG+ +R G +V++YE A + LL A+IA +L L
Sbjct: 87 RSGFGWYLLGIARERAGDFASSVTAYESALK-LLPDHAEIAN-DLGRLAYRMGMRTQAEK 144
Query: 205 -IHHAQCLLPES-SGDNSLDKELEPEE-LEEILSKLKESMQSDTRQAVVWNTLGLILLKS 261
H PE+ G N+L L +E EE + LK ++ A++WNT+G ++ +
Sbjct: 145 LFRHFLARHPENHEGANNLACALRDQERYEEAVEVLKPAIIKSPEVAMLWNTMGTVMAEQ 204
Query: 262 GRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGD 297
G +S L +D + NLG A GD
Sbjct: 205 GDFPTSEVFFREALRLDGDQARPRYNLGNARLMQGD 240
>gi|163851391|ref|YP_001639434.1| hypothetical protein Mext_1964 [Methylobacterium extorquens PA1]
gi|254561150|ref|YP_003068245.1| hypothetical protein METDI2727 [Methylobacterium extorquens DM4]
gi|163662996|gb|ABY30363.1| Tetratricopeptide TPR_2 repeat protein [Methylobacterium extorquens
PA1]
gi|254268428|emb|CAX24385.1| conserved hypothetical protein; putative exported protein
[Methylobacterium extorquens DM4]
Length = 286
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 44/92 (47%)
Query: 234 LSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYF 293
++ L + + + A +NT G ++G+ +I+ S + +DPN+ N +AY
Sbjct: 54 IASLSDVISRNPSDAGAYNTRGAAYARAGQFGEAITDFSKAIQLDPNSASAYNNRALAYR 113
Query: 294 QSGDMEQSAKCFQDLILKDQNHPAALINYAAL 325
Q+G + + + F I D N AA I A L
Sbjct: 114 QTGRADAAMQDFSKAIANDPNFSAAYIGRANL 145
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 87/193 (45%), Gaps = 23/193 (11%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPN-NCDCIGN 287
+ E ++ +++Q D A +N L ++GR +++ S +A DPN + IG
Sbjct: 83 QFGEAITDFSKAIQLDPNSASAYNNRALAYRQTGRADAAMQDFSKAIANDPNFSAAYIGR 142
Query: 288 LGIAYFQSGDME--------------QSAKCF--QDLILKDQNH-PAALINYAALLLCKY 330
+ Q GD++ +SA+ + + L+ + QNH P A+ ++AA +
Sbjct: 143 ANLERAQ-GDLDGALNDLNVAIRLAPESAEAYHARGLVRQKQNHNPEAIGDFAAAI--DR 199
Query: 331 GSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSS 390
+A A G+ L + A E AAL + K A WA AY T + +
Sbjct: 200 NPFVAAPYAARGQ--SLISLGQYDKAIEDFNAALNVNSKDAGSWAYRGLAYEKTNRRKEA 257
Query: 391 GKCLEKAAKLEPN 403
+ ++AA+L+PN
Sbjct: 258 NESYQQAARLDPN 270
>gi|383866051|ref|XP_003708485.1| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit-like
[Megachile rotundata]
Length = 1094
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 64/155 (41%), Gaps = 21/155 (13%)
Query: 251 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 310
++ LG + + G+LQ ++ + + P+ D NL A +GDMEQ+ + +
Sbjct: 141 YSNLGNVFKERGQLQEALENYRHAVRLKPDFIDGYINLAAALVAAGDMEQAVQAY----- 195
Query: 311 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 370
+ Y L C + G L + ++ AK C L A++ P
Sbjct: 196 ------VTALQYNPDLYC----------VRSDLGNLLKALARLDEAKACYLKAIETRPDF 239
Query: 371 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 405
A W+NL + G+ + EKA L+PN +
Sbjct: 240 AVAWSNLGCVFNAQGEIWLAIHHFEKAVALDPNFL 274
Score = 39.7 bits (91), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 125/306 (40%), Gaps = 57/306 (18%)
Query: 248 AVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQD 307
AV W+ LG + G + +I +A+DPN D AY G++ + A+ F
Sbjct: 240 AVAWSNLGCVFNAQGEIWLAIHHFEKAVALDPNFLD-------AYINLGNVLKEARIFDR 292
Query: 308 LILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL-DQASAVNVAKECLLAALKA 366
+ AA + AL L +V+ G AC+ + +++A + A++
Sbjct: 293 AV-------AAYLR--ALNLSPNNAVV------HGNLACVYYEQGLIDLAIDTYRRAIEL 337
Query: 367 DPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVA-VSR----IKDAER 421
P + NLANA G + C A +L P+ + +A + R I++A R
Sbjct: 338 QPNFPDAYCNLANALKEKGQVVEAEDCYNTALRLCPSHADSLNNLANIKREQGYIEEATR 397
Query: 422 ----SQEPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFAAVQKTHHEVAAAFETEENE 477
+ E + + A + +AS+L++ + E + + +Q T A A+ N
Sbjct: 398 LYLKALEVFPEFAAAHSNLASVLQQQGKLN-EALMHYKEAIRIQPT---FADAYSNMGNT 453
Query: 478 LSKMEECAGAGESAFLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSG 537
L +M++ G A +C A++ +P A +NLA+ H+ SG
Sbjct: 454 LKEMQDIQG---------------ALQCYTRAIQINPAFADAHSNLASI------HKDSG 492
Query: 538 KCLEKV 543
E +
Sbjct: 493 NIPEAI 498
>gi|126179259|ref|YP_001047224.1| TPR repeat-containing protein [Methanoculleus marisnigri JR1]
gi|125862053|gb|ABN57242.1| Tetratricopeptide TPR_2 repeat protein [Methanoculleus marisnigri
JR1]
Length = 1069
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 101/451 (22%), Positives = 155/451 (34%), Gaps = 99/451 (21%)
Query: 149 VARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHA 208
VA P + + +G++Y LG+ +AV S+++ IL + VQI +A
Sbjct: 278 VALADPDHVPVRYAMGMVYDALGRYERAVKSFDR---ILKHDQGQ---------VQIWYA 325
Query: 209 QCLLPESSGD-----NSLDKELEP------------------EELEEILSKLKESMQSDT 245
+ + G S D+ LE E E + ++ ++ D
Sbjct: 326 RGMALFRFGQYAEAIRSFDRVLESRATTGMKWIGDGTDLALFERDEGGAPRRQKPLKFDA 385
Query: 246 RQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCF 305
+V N G LL GR + +L DP N + G A G E++A+C
Sbjct: 386 LNELVHNCRGTALLHLGRYAEAQKEFEHVLDADPGNVSVLQRSGTALLHLGRYEEAARCL 445
Query: 306 QDLILKDQNHPAALINYAALLLCKYG----------SVLAGAGAN----TGEGACLDQAS 351
D +L+ + H A + A L G SV GA +GA L
Sbjct: 446 -DAVLEKEPHNAVAGSMKADALMNLGRHDDALACLDSVQGAGGAEPHLLYRKGAALLHIG 504
Query: 352 AVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP--NCMSTRY 409
A E A L +P A + A G + + C ++A P
Sbjct: 505 RYTEAVEAFEALLNVNPADAAAENSRGEALVHLGRYEEALACYDRALSAVPADRAALLGR 564
Query: 410 AVAVSRIKDAERSQEPTEQLSWAG-NEMASILREGDPVQIEPPIAW-------------- 454
+ A+ R+ E + E ++L+ AG + ++LR+ AW
Sbjct: 565 STALERLGRYEEALESIDRLTQAGPGDTGTLLRK----------AWILEALGRYDAAVEC 614
Query: 455 --AGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKA 512
A AA KT + V F L + EE AG E A +A
Sbjct: 615 YEALLAADPKTGYPVNLGFVL--AMLGRYEEAAGRFEE------------------ATRA 654
Query: 513 DPKAAHIWANLANAYYLTGDHRSSGKCLEKV 543
DP W N A G + + C KV
Sbjct: 655 DPDNFFAWFNRGRALERMGQYADAAGCYAKV 685
Score = 46.2 bits (108), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 33/171 (19%), Positives = 64/171 (37%), Gaps = 21/171 (12%)
Query: 243 SDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSA 302
D V+ G + + G + + + +L +P + D + +G AY GD ++
Sbjct: 145 GDPENTVLRERCGRMFERIGDFREAAACFEKILRTNPGSTDLLSRIGAAYLNQGDYSKAV 204
Query: 303 KCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLA 362
F ++ + + AL YG A L+ A +C
Sbjct: 205 GLFDRVLDTEPQNIDAL----------YGKARA-----------LEHLGLFQEAADCGAG 243
Query: 363 ALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAV 413
+ +P+ W + + G H + +C EK A +P+ + RYA+ +
Sbjct: 244 IVALEPENIPAWYHRGSMLLRAGKHEDALECFEKVALADPDHVPVRYAMGM 294
>gi|16265215|ref|NP_438007.1| TonB-dependent receptor protein [Sinorhizobium meliloti 1021]
gi|15141355|emb|CAC49867.1| hypothetical exported protein, TonB-dependent receptor protein
[Sinorhizobium meliloti 1021]
Length = 1200
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 75/175 (42%), Gaps = 21/175 (12%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
+LE L+ L+ ++++ + +WN+LGL+ G +++ + +A+DP + NL
Sbjct: 423 DLEGALADLERALKTAPGSSSIWNSLGLVQGARGDNRAAEAAFKQAIALDPLDPVSHANL 482
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLD 348
I Y M ++ + + D + AL+ G
Sbjct: 483 AIQYMDEMRMAEAKREIDAALSVDPSFDVALV---------------------ARGRYHM 521
Query: 349 QASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 403
Q + A E LLA A+P ++ LA A+Y GD + + L+ A +L+PN
Sbjct: 522 QNGEADKAVEDLLAGSTANPAYSNAQLLLAAAHYEKGDRIPAAQALDNADRLDPN 576
>gi|91776987|ref|YP_546743.1| tetratricopeptide TPR_2 [Methylobacillus flagellatus KT]
gi|91710974|gb|ABE50902.1| Tetratricopeptide TPR_2 [Methylobacillus flagellatus KT]
Length = 552
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 37/70 (52%)
Query: 232 EILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIA 291
E LSK S+++ Q W +G + L++ + Q + + +L +DP N + I L IA
Sbjct: 27 EALSKYTASLEAGNGQIQTWLRIGNLFLRTMKYQQAAETMEFVLGMDPQNIEAIYGLAIA 86
Query: 292 YFQSGDMEQS 301
YF G E++
Sbjct: 87 YFYLGRHEEA 96
>gi|218530199|ref|YP_002421015.1| hypothetical protein Mchl_2240 [Methylobacterium extorquens CM4]
gi|240138554|ref|YP_002963026.1| hypothetical protein MexAM1_META1p1938 [Methylobacterium extorquens
AM1]
gi|418061679|ref|ZP_12699523.1| Tetratricopeptide TPR_1 repeat-containing protein [Methylobacterium
extorquens DSM 13060]
gi|218522502|gb|ACK83087.1| Tetratricopeptide TPR_2 repeat protein [Methylobacterium extorquens
CM4]
gi|240008523|gb|ACS39749.1| conserved hypothetical protein; putative exported protein
[Methylobacterium extorquens AM1]
gi|373564765|gb|EHP90850.1| Tetratricopeptide TPR_1 repeat-containing protein [Methylobacterium
extorquens DSM 13060]
Length = 286
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 44/92 (47%)
Query: 234 LSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYF 293
++ L + + + A +NT G ++G+ +I+ S + +DPN+ N +AY
Sbjct: 54 IASLSDVISRNPSDAGAYNTRGAAYARAGQFGEAITDFSKAIQLDPNSASAYNNRALAYR 113
Query: 294 QSGDMEQSAKCFQDLILKDQNHPAALINYAAL 325
Q+G + + + F I D N AA I A L
Sbjct: 114 QTGRADAAMQDFSKAIANDPNFSAAYIGRANL 145
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 87/193 (45%), Gaps = 23/193 (11%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPN-NCDCIGN 287
+ E ++ +++Q D A +N L ++GR +++ S +A DPN + IG
Sbjct: 83 QFGEAITDFSKAIQLDPNSASAYNNRALAYRQTGRADAAMQDFSKAIANDPNFSAAYIGR 142
Query: 288 LGIAYFQSGDME--------------QSAKCF--QDLILKDQNH-PAALINYAALLLCKY 330
+ Q GD++ +SA+ + + L+ + QNH P A+ ++AA +
Sbjct: 143 ANLERAQ-GDLDGALNDLNVAIRLAPESAEAYHARGLVRQKQNHNPEAIGDFAAAI--DR 199
Query: 331 GSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSS 390
+A A G+ L + A E AAL + K A WA AY T + +
Sbjct: 200 NPFVAAPYAARGQ--SLISLGQYDKAIEDFNAALNVNAKDAGSWAYRGLAYEKTNRRKEA 257
Query: 391 GKCLEKAAKLEPN 403
+ ++AA+L+PN
Sbjct: 258 NESYQQAARLDPN 270
>gi|154150715|ref|YP_001404333.1| hypothetical protein Mboo_1172 [Methanoregula boonei 6A8]
gi|153999267|gb|ABS55690.1| TPR repeat-containing protein [Methanoregula boonei 6A8]
Length = 4079
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 117/305 (38%), Gaps = 48/305 (15%)
Query: 153 MPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLL 212
+P +A AH+ GL LG+ KA+ S+ A E D + + L + +A L
Sbjct: 2416 VPGHAQAHYHKGLALFALGKNEKAIRSFTHA------LEHDPSLSDALFHTGLAYA-ALS 2468
Query: 213 PESSGDNSLDKELE--PEELEEILSK----------------LKESMQSDTRQAVVWNTL 254
S ++ DK LE P+ E + K L+ S+ + A VW
Sbjct: 2469 RYSPALSAFDKLLESGPQNAEALFQKGRMLAKLGRPDEALAVLETSLGLENNIADVWLLK 2528
Query: 255 GLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQN 314
G +LL+ RL+ ++ V LA+ P N G A+ ++ +CF ++ D
Sbjct: 2529 GSVLLEQERLEDALEVFDRALALTPENNAAWYRKGKAFSGLHRYPEAIQCFDRVVTSDTG 2588
Query: 315 HPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIW 374
C A A +G+ L + A E L AL+ P A+ W
Sbjct: 2589 -------------C--------AQAWFRKGSALLSNGDLRAAIEALTKALELKPDNANGW 2627
Query: 375 ANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRY--AVAVSRIKDAERSQEPTEQLSWA 432
+ A A G + S ++A L P S + A+SR+ ++ E E S
Sbjct: 2628 YDRAVALAGLGRYEESIPSYDRALSLNPKYTSAYFDKGSALSRLGRDRQAIEAFEMASAI 2687
Query: 433 GNEMA 437
E A
Sbjct: 2688 DPEFA 2692
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 79/194 (40%), Gaps = 31/194 (15%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 213
P A A + +GL LG+ AV++Y++A +I RP+ V H L
Sbjct: 411 PGCASAAYQIGLASASLGRYSDAVAAYDRALKI---------RPDYPDAV-YHKGFALAK 460
Query: 214 ESSGDNSL---DKELEPE------------------ELEEILSKLKESMQSDTRQAVVWN 252
+ +++L D+ L LEE L L +S+ A V+
Sbjct: 461 LGNSEDALLEFDRALTENPGNAPAYHQKGQLLVRTGRLEEALEALNKSIALKPDNAQVYY 520
Query: 253 TLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKD 312
G LLK+ R ++ + + PN + N GIA+ ++G +++ + F I D
Sbjct: 521 DKGSALLKAERFGPALEAFDQAIGIYPNYVNAYYNKGIAFSRTGMRKEALEAFDHAIAID 580
Query: 313 QNHPAALINYAALL 326
H AL + +L
Sbjct: 581 PTHTLALYHRGTML 594
Score = 43.5 bits (101), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 58/270 (21%), Positives = 108/270 (40%), Gaps = 48/270 (17%)
Query: 70 NHSSSHHDKGSILM--SKEMDVAEVEGKKINK----------LGKCRSRISSKMDSALEF 117
++S+ ++KG LM S+ D AE G+ + + G C + + D+ F
Sbjct: 616 QNTSALYEKGVALMQLSRWKDAAEAFGQAVEQDPGLIDAWLAFGTCNANLGKFPDAIAAF 675
Query: 118 ----GVDADGDQS----GLGTSSSSR-EEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQ 168
+ Q+ G+ ++ + EE +++L L P++ A + G+
Sbjct: 676 DRVIALSPKNTQAFIHKGIALVTTGKFEEAIAALNRAL----EDAPRDERAWYYKGMSLA 731
Query: 169 RLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPE 228
L + +AV S+E+ EI RC + Q +A L +
Sbjct: 732 ALQRFEEAVRSFERVLEINRRCSP--------AFFQKGNALAHL--------------GK 769
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
+LE I+S ++++ D V G+ L + R +I LL ++P N + L
Sbjct: 770 QLEAIIS-YDQALEIDPDNPVTLYQKGIALAQRERYDDAIKTFERLLTLEPENAQALYYL 828
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAA 318
GIAY +++ F+ + D +P A
Sbjct: 829 GIAYAGRQRFDEAIVAFERSLEIDPKNPLA 858
Score = 42.4 bits (98), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 70/174 (40%), Gaps = 32/174 (18%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLS----LVQIHHAQ 209
P N+ AH+ +GL G+P A++++E A +I D P + L+ + Q
Sbjct: 1159 PHNSEAHYHMGLALAGSGRPKDALAAFESALKI-----RDTFAPAWYNKGKMLLDLGKYQ 1213
Query: 210 CLLPESSGDNSLDKELEPEE--------------LEEILSKLKESMQSDTRQAVVWNTLG 255
L ++ D +L++E E E + + +++ DT A + G
Sbjct: 1214 EAL--AAFDQALEREPAYTEVFYSRGVALSKLGRFPEAIEAFERNLEKDTSNAPGYYFKG 1271
Query: 256 LILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLI 309
+ L K GR Q ++ L DP N + YFQ G FQ+ +
Sbjct: 1272 IALSKLGRYQEALDAFDRALVYDPENA-------LVYFQKGRALDGLNRFQEAV 1318
Score = 42.4 bits (98), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 75/217 (34%), Gaps = 20/217 (9%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
+L + +Q+D W G+ L GR +IS L + P N D +
Sbjct: 3353 KLTNAMEAFDHVIQADPGSVQGWLHRGMALFDLGRFNDAISSYKKALEIGPTNADAWYLV 3412
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLC---KYGSVLAGAG------- 338
G +Y+ +++ F D L Q A Y L KYG ++
Sbjct: 3413 GRSYYALNTYDEAIAAF-DRALDLQGEFAEAWYYKGRTLFAMGKYGEAVSAYDSTLVLRP 3471
Query: 339 ----ANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCL 394
A +G L + A AL+ P ++IW A H+ + C
Sbjct: 3472 KHDEAFYHKGMALLKLQRAGDAVSAFDQALRLRPNFSYIWTGKGMALAALDRHKDAISCY 3531
Query: 395 EKAAKLEPNCMSTRYAVAVS-----RIKDAERSQEPT 426
KA L+ Y +S R +DA R+ E T
Sbjct: 3532 TKAIALDRKDSRAYYQAGLSYLSLGRYQDAIRNFEAT 3568
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 39/194 (20%), Positives = 73/194 (37%), Gaps = 15/194 (7%)
Query: 230 LEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLG 289
+ +S ++ D A V+ G+ L GR +I+ + + P N+G
Sbjct: 124 FRDAISAYDHALAIDPTYAKVYYNKGIALADLGRHDEAIAAYGKAVGIVPEYAKAYYNMG 183
Query: 290 IAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCK---YGSVLAGAGANTG---- 342
I+ ++ G +++ F+ D + P + Y A +L K Y AG
Sbjct: 184 ISLYEIGRYDEALGAFEKAHDLDPSDPW-VWYYRAFILAKQERYAQAAEAAGVFLSFEPE 242
Query: 343 -------EGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLE 395
+G L + ++ A + A++ DP A W + + + + L+
Sbjct: 243 HADIWVIQGISLYRLRRLDEAADAFDRAIEQDPLAPDAWLYKGFSLFDMERYEDATYALD 302
Query: 396 KAAKLEPNCMSTRY 409
KAA+L P Y
Sbjct: 303 KAAELSPQTTKIYY 316
Score = 40.0 bits (92), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 82/199 (41%), Gaps = 25/199 (12%)
Query: 93 EGKKINKLGKCRSRISSKMDSALEFGVDADGDQSGLGTSSSSREEKVSSLKTGLVHVARK 152
+G + LGK I S D ALE D G + + RE ++KT +
Sbjct: 760 KGNALAHLGKQLEAIIS-YDQALEIDPDNPVTLYQKGIALAQRERYDDAIKT-FERLLTL 817
Query: 153 MPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLL 212
P+NA A + LG+ Y + +A+ ++E++ EI D P + + +C
Sbjct: 818 EPENAQALYYLGIAYAGRQRFDEAIVAFERSLEI------DPKNPLAHHYMGVSLVEC-- 869
Query: 213 PESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLS 272
+ ++ L E++ D A + G+ L+S + + +I+ L+
Sbjct: 870 ---------------DRYDDALRSFSEALLLDASNASTYYYQGIAFLQSHQYEEAIAALN 914
Query: 273 SLLAVDPNNCDCIGNLGIA 291
+ + +D + D LGI+
Sbjct: 915 TAIRMDTSLSDAFTYLGIS 933
Score = 39.7 bits (91), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 62/156 (39%), Gaps = 29/156 (18%)
Query: 153 MPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLL 212
+PK A AH L G+ G ++ +Y++A L C+
Sbjct: 1464 LPKYAPAHHLKGVSLAAQGLYQDSIYAYDRA----LECDP-------------------- 1499
Query: 213 PESSGDNSLDKELEPEEL---EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSIS 269
SG+++L+K + L E+ L+ ++++ A W GLIL GR Q S+
Sbjct: 1500 --GSGESALNKAMSLHNLGQDEDALAAAVKAIEIQPDFAEAWRYRGLILSNLGRYQESVE 1557
Query: 270 VLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCF 305
L LA DP N G A+ G E + +
Sbjct: 1558 ALDHALAGDPKNARVNYQKGRAFDGLGQYENAISAY 1593
Score = 38.5 bits (88), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 57/159 (35%), Gaps = 21/159 (13%)
Query: 239 ESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDM 298
E ++ D AV W G+ L +++I LA+DP+ G A+ G
Sbjct: 3941 EGLRRDPENAVGWTRRGMSLAGLNDHKAAIESYDRALAIDPSFSIAYFTRGSAFEALGQF 4000
Query: 299 EQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKE 358
E++ F+ +I + A I+ +G L + A
Sbjct: 4001 EEAEASFRAMISLQPDFVDAWIH---------------------QGRALQEQEKYQEALT 4039
Query: 359 CLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKA 397
AL+ DP IW ++ + G H + C EKA
Sbjct: 4040 SFKRALEIDPSRKEIWNDVGSTLDKLGKHEEAQICYEKA 4078
>gi|428777845|ref|YP_007169632.1| hypothetical protein PCC7418_3303 [Halothece sp. PCC 7418]
gi|428692124|gb|AFZ45418.1| Tetratricopeptide TPR_1 repeat-containing protein [Halothece sp.
PCC 7418]
Length = 1043
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 67/148 (45%), Gaps = 21/148 (14%)
Query: 259 LKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAA 318
L + Q++IS+ +L +DPN NLG A GD+E +A+ +Q I + P++
Sbjct: 43 LVQKKFQNAISLCRQILKLDPNFALAYHNLGKALAAIGDLETAAETYQQAITLE---PSS 99
Query: 319 LINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLA 378
+ YA L GS+ A + A +C A++ P A ++ NLA
Sbjct: 100 ALAYANL-----GSIYA-------------KKEKWQDALKCYQKAIELKPDLAGVYRNLA 141
Query: 379 NAYYLTGDHRSSGKCLEKAAKLEPNCMS 406
+ + + + E+A LEPN ++
Sbjct: 142 RVWERLDQPQQAVEARERAYSLEPNQVT 169
>gi|452964763|gb|EME69797.1| SPY protein [Magnetospirillum sp. SO-1]
Length = 794
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 95/261 (36%), Gaps = 33/261 (12%)
Query: 174 LKAVSSYEKAEEILLR---CEADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEEL 230
L+A +AE LR CE D A L + AQ L ES G L P +
Sbjct: 81 LQAAGRLPEAEREFLRLRECEPDQAE-HRFGLGLVTSAQGRLAESIGHFRDGLALAPHDA 139
Query: 231 E---------EILSKLKESMQSDTRQAVV-------WNTLGLILLKSGRLQSSISVLSSL 274
E +L E++ + R A + LG L +GR +
Sbjct: 140 EACCNLGLAYRAAGRLDEAVDAFARAARLAPGLAKAHGNLGGALFAAGRWAEAAEAWKKA 199
Query: 275 LAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL-------- 326
L +DPN+ + +LGIA G ++++ + F+ + D HP N L
Sbjct: 200 LVLDPNHPEVEADLGIALANLGRLDEAVQAFERAVRLDPRHPVFHYNLGRALHDMGRLDE 259
Query: 327 -LCKYGSVLA----GAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAY 381
YG V+A A A+ G L + A A+ +P AH N +
Sbjct: 260 ACAVYGQVVALDPGHASAHLNRGVILRKQKNYAEAVAAYDRAIALEPGNAHAHLNRSKVL 319
Query: 382 YLTGDHRSSGKCLEKAAKLEP 402
Y G H+ + A L+P
Sbjct: 320 YDMGRHQEALASCRDAIALKP 340
>gi|322795771|gb|EFZ18450.1| hypothetical protein SINV_10406 [Solenopsis invicta]
Length = 1301
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 83/199 (41%), Gaps = 38/199 (19%)
Query: 228 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 287
E EE ++ L+ ++++ W G I S+ + + +D NN +C+
Sbjct: 430 ERYEEAINALELALENSE----AWLLFGKIYWDMRDYNHSLMAFLNGVQMDRNNWECMVY 485
Query: 288 LGIAYFQ-SGDMEQSAKCFQDLILKDQNHPAALIN----YAALLLCKYGSVLAGAGAN-- 340
LG Y + + D+E+S KC+ H A IN A + L +L AN
Sbjct: 486 LGHYYREHNNDLERSRKCY---------HAALQINPNSEEAGIGLSTTYRLLKNTDANIQ 536
Query: 341 -----TGEGA------------CLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYL 383
T +G LDQ A A L ++ADP H W +LA+AY +
Sbjct: 537 LLQKVTMQGTGPRWAWLQLGLHYLDQGDA-GQAITALQHVIRADPNDNHSWESLADAYLV 595
Query: 384 TGDHRSSGKCLEKAAKLEP 402
G H S+ K ++A +L P
Sbjct: 596 RGAHTSALKSYQRALQLSP 614
>gi|223937044|ref|ZP_03628952.1| TPR repeat-containing protein [bacterium Ellin514]
gi|223894325|gb|EEF60778.1| TPR repeat-containing protein [bacterium Ellin514]
Length = 466
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 57/266 (21%), Positives = 104/266 (39%), Gaps = 44/266 (16%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 213
PK+A A+ Y + G KA+S Y +A +QI+
Sbjct: 125 PKDAWAYAKRAADYHKKGDSEKAISDYTQA-------------------IQINPKDANYY 165
Query: 214 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 273
+S G K + ++ ++ + ++ + +Q +N+ GL G + +I LS
Sbjct: 166 DSRGRAYAMKR----DWDKAIADYDQVVKLNPKQVSAYNSRGLAYAMKGDMDKAIRDLSE 221
Query: 274 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLI-LKDQNHPAALINYAALLLC---- 328
++ ++P + G+ G++Y GD +++ F +LI LK P I Y +
Sbjct: 222 VIKLNPKDAPAYGSRGLSYAMKGDWDKAVSDFSELIKLK----PTDSIGYDSRATAYQNQ 277
Query: 329 -KYGSVLAG-----------AGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWAN 376
K LA AGA G A E +++ +P+ A +A
Sbjct: 278 GKLDEALADFSEAIKLNDKDAGAFHNRGLIYVGKGDWEKAIENFSKSIQLNPQDADAFAK 337
Query: 377 LANAYYLTGDHRSSGKCLEKAAKLEP 402
AYY G+++ + +A +L P
Sbjct: 338 RGYAYYQKGEYQKGIDDINEALRLNP 363
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 69/155 (44%), Gaps = 23/155 (14%)
Query: 146 LVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQI 205
L V + PK+A A+ GL Y G KAVS + +E I L+ I
Sbjct: 219 LSEVIKLNPKDAPAYGSRGLSYAMKGDWDKAVSDF--SELIKLKPTDSIG---------- 266
Query: 206 HHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQ 265
+ ++ ++ G +L+E L+ E+++ + + A ++ GLI + G +
Sbjct: 267 YDSRATAYQNQG-----------KLDEALADFSEAIKLNDKDAGAFHNRGLIYVGKGDWE 315
Query: 266 SSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQ 300
+I S + ++P + D G AY+Q G+ ++
Sbjct: 316 KAIENFSKSIQLNPQDADAFAKRGYAYYQKGEYQK 350
>gi|145537418|ref|XP_001454423.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124422183|emb|CAK87026.1| unnamed protein product [Paramecium tetraurelia]
Length = 537
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 69/334 (20%), Positives = 121/334 (36%), Gaps = 27/334 (8%)
Query: 228 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 287
++ EE + E++ + + A W G+ L + + +I + ++++P D N
Sbjct: 161 KQYEEAIKCYNEAIYINPKDASAWQNKGITLYNLNQNEEAIECYNEAISINPKYVDAWNN 220
Query: 288 LGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL--LCKYGSVL----------- 334
GIA E++ +C+ + I + A N L L +Y +
Sbjct: 221 KGIALDDLNQYEEAIECYNEAISISPKYVDAWYNKGITLGNLNQYNEAIECYNEAISINP 280
Query: 335 AGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCL 394
A A +G L A EC A+ +PK ++W N N + + +C
Sbjct: 281 KYAEAWNYKGITLGNLQQYEEAIECYNEAISINPKVDYVWFNKGNVLGNLNQYNEAIECY 340
Query: 395 EKAAKLEPNCMSTRYAVAVSRIKDAERSQEPTEQLSWAGNEMASILREGDPVQIEPPIAW 454
+A + P +YA A + A R+ E+ NE SI +P E AW
Sbjct: 341 NEAISINP-----KYAEAWNNKGIALRNLNQYEEAFKCYNEAISI----NPKFAE---AW 388
Query: 455 --AGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKA 512
GF + A E ++ A + L + A EC A+
Sbjct: 389 YNKGFTLNNLNQFDEAIECFNEAISINPKYASAWYNKGITLRNLNQYEEAIECYNEAISI 448
Query: 513 DPKAAHIWANLANAYYLTGDHRSSGKCLEKVLMV 546
+PK A W + A + + KC + + +
Sbjct: 449 NPKYAEAWNDKGIALRNLNQYEEAIKCYNEAISI 482
Score = 39.7 bits (91), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 39/200 (19%), Positives = 74/200 (37%), Gaps = 13/200 (6%)
Query: 228 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 287
++ EE + E++ + + VW G +L + +I + ++++P + N
Sbjct: 297 QQYEEAIECYNEAISINPKVDYVWFNKGNVLGNLNQYNEAIECYNEAISINPKYAEAWNN 356
Query: 288 LGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL--LCKYGSVL----------- 334
GIA E++ KC+ + I + A N L L ++ +
Sbjct: 357 KGIALRNLNQYEEAFKCYNEAISINPKFAEAWYNKGFTLNNLNQFDEAIECFNEAISINP 416
Query: 335 AGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCL 394
A A +G L + A EC A+ +PK A W + A + + KC
Sbjct: 417 KYASAWYNKGITLRNLNQYEEAIECYNEAISINPKYAEAWNDKGIALRNLNQYEEAIKCY 476
Query: 395 EKAAKLEPNCMSTRYAVAVS 414
+A + P Y ++
Sbjct: 477 NEAISINPKFAEAWYNKGIT 496
>gi|428313677|ref|YP_007124654.1| hypothetical protein Mic7113_5616 [Microcoleus sp. PCC 7113]
gi|428255289|gb|AFZ21248.1| hypothetical protein Mic7113_5616 [Microcoleus sp. PCC 7113]
Length = 1041
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 68/184 (36%), Gaps = 24/184 (13%)
Query: 228 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 287
E +E +S ++ + + VW+ G L K GR + +IS L+++PN + N
Sbjct: 223 ERYKEAISSYDHALLINPNVSEVWSNRGFALWKLGRYEEAISSYDYALSINPNVSEVWSN 282
Query: 288 LGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL 347
G A ++ G E++ F +L + N N G+ L
Sbjct: 283 RGFALWKLGRYEEAVSSFDHALLINPNDSLVWSN---------------------RGSAL 321
Query: 348 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN---C 404
D + A AL DP+ W NA + + ++A L PN C
Sbjct: 322 DDLNRYEEAISSWDRALSLDPENTSAWYGRGNALEDLEQYEEAIASWDRALTLNPNLPEC 381
Query: 405 MSTR 408
+ R
Sbjct: 382 WTNR 385
>gi|384538401|ref|YP_005722485.1| hypothetical protein SM11_pD0151 [Sinorhizobium meliloti SM11]
gi|336037054|gb|AEH82984.1| hypothetical exported protein, TonB-dependent receptor protein
[Sinorhizobium meliloti SM11]
Length = 1190
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 75/175 (42%), Gaps = 21/175 (12%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
+LE L+ L+ ++++ + +WN+LGL+ G +++ + +A+DP + NL
Sbjct: 423 DLEGALADLERALKTAPGSSSIWNSLGLVQGARGDNRAAEAAFKQAIALDPLDPVSHANL 482
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLD 348
I Y M ++ + + D + AL+ G
Sbjct: 483 AIQYMDEMRMAEAKREIDAALSVDPSFDVALV---------------------ARGRYHM 521
Query: 349 QASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 403
Q + A E LLA A+P ++ LA A+Y GD + + L+ A +L+PN
Sbjct: 522 QNGEADKAVEDLLAGSTANPAYSNAQLLLAAAHYEKGDRIPAAQALDNADRLDPN 576
>gi|196230691|ref|ZP_03129552.1| Tetratricopeptide TPR_2 repeat protein [Chthoniobacter flavus
Ellin428]
gi|196225032|gb|EDY19541.1| Tetratricopeptide TPR_2 repeat protein [Chthoniobacter flavus
Ellin428]
Length = 684
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 83/197 (42%), Gaps = 15/197 (7%)
Query: 222 DKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNN 281
D+ L L E + ++ + V + LGLI +++GRL + ++ L +D N
Sbjct: 12 DQHLYAGRLAEAEAIYRQILGVQPNHVGVLHNLGLIAVQTGRLAMAEELIRKALGLDAGN 71
Query: 282 CDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVL-AGAGAN 340
+LG Y G +++ + +Q + +P A N L+L G + A A
Sbjct: 72 AIIHCSLGEVYRTQGRPQEAMESYQRALQLRPGYPEAASNL-GLVLADQGRLSEAAAACR 130
Query: 341 TGEGACLDQASAVNVAKECLLA-------------ALKADPKAAHIWANLANAYYLTGDH 387
+ + D A A N+ + L + AL P A W NL Y+ +G
Sbjct: 131 SALQSRPDFAPAHNILGKILGSSGDFAQAIASFQQALAIQPHFAEAWNNLGVTYHESGQA 190
Query: 388 RSSGKCLEKAAKLEPNC 404
+ + L++AA+L PN
Sbjct: 191 GPALEALQRAAQLNPNA 207
Score = 45.8 bits (107), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 72/171 (42%), Gaps = 23/171 (13%)
Query: 156 NAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPES 215
NA H LG +Y+ G+P +A+ SY++A ++ RP PE+
Sbjct: 71 NAIIHCSLGEVYRTQGRPQEAMESYQRALQL---------RPGY-------------PEA 108
Query: 216 SGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLL 275
+ + L + L E + + ++QS A N LG IL SG +I+ L
Sbjct: 109 ASNLGLVLA-DQGRLSEAAAACRSALQSRPDFAPAHNILGKILGSSGDFAQAIASFQQAL 167
Query: 276 AVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL 326
A+ P+ + NLG+ Y +SG + + Q + N P N LL
Sbjct: 168 AIQPHFAEAWNNLGVTYHESGQAGPALEALQRAAQLNPNAPEIHNNLGRLL 218
>gi|425435522|ref|ZP_18815972.1| Similar to tr|Q96301|Q96301 [Microcystis aeruginosa PCC 9432]
gi|389679929|emb|CCH91334.1| Similar to tr|Q96301|Q96301 [Microcystis aeruginosa PCC 9432]
Length = 1254
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 44/213 (20%), Positives = 78/213 (36%), Gaps = 23/213 (10%)
Query: 228 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 287
+E E+ ++ S+Q D V+ +L + + + L + P+N + N
Sbjct: 1063 KETEKAIACYSHSVQLDATNVEVYKSLAQLYDRQENYAKAEKYYRCALLLQPHNLELRYN 1122
Query: 288 LGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL 347
LG+ ++ +++ CFQ +I Q P I Y L G
Sbjct: 1123 LGVVLYEQEKFDKAVSCFQKII---QAKPQDAIAYLHL------------------GISY 1161
Query: 348 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP--NCM 405
Q + AK C A+ DP A + NL Y D + + C + + +P
Sbjct: 1162 KQQKLLTKAKSCFEKAIDLDPDYAMAYYNLGVVYSCQPDEKKAVDCFRQCLRCDPANKLA 1221
Query: 406 STRYAVAVSRIKDAERSQEPTEQLSWAGNEMAS 438
T A+S IK+ + W N++ +
Sbjct: 1222 HTALLFALSGIKEVSSEEIYDASSRWYRNKIQT 1254
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 90/222 (40%), Gaps = 48/222 (21%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELL-SLVQIHHAQCLL 212
P A + LGL+Y++L + KA++ Y + ++ D E+ SL Q++ Q
Sbjct: 1046 PDYPTAFYNLGLVYEQLKETEKAIACYSHSVQL------DATNVEVYKSLAQLYDRQENY 1099
Query: 213 PESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLS 272
++ L+P LE + +N LG++L + + ++S
Sbjct: 1100 AKAEKYYRCALLLQPHNLE-----------------LRYN-LGVVLYEQEKFDKAVSCFQ 1141
Query: 273 SLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGS 332
++ P + +LGI+Y Q + ++ CF+ I D ++ A N + C+
Sbjct: 1142 KIIQAKPQDAIAYLHLGISYKQQKLLTKAKSCFEKAIDLDPDYAMAYYNLGVVYSCQ--- 1198
Query: 333 VLAGAGANTGEGACLDQASAVNVAKECLLAALKADP--KAAH 372
D+ AV+ ++C L+ DP K AH
Sbjct: 1199 --------------PDEKKAVDCFRQC----LRCDPANKLAH 1222
>gi|410459952|ref|ZP_11313640.1| TPR -repeat containing protein [Bacillus azotoformans LMG 9581]
gi|409927790|gb|EKN64916.1| TPR -repeat containing protein [Bacillus azotoformans LMG 9581]
Length = 221
Score = 47.4 bits (111), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 50/113 (44%), Gaps = 21/113 (18%)
Query: 288 LGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL 347
+GI Y Q G E++A+ F +++ +D N P A IN +G++LA G N A
Sbjct: 7 IGIQYMQQGKYEEAARIFNEILEQDPNDPIAYIN--------FGNLLAAVGENVRAIAFF 58
Query: 348 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKL 400
++ A++ D A + N YY D+ + E+A KL
Sbjct: 59 NK-------------AIEIDDSLATAYFGAGNTYYNQEDYVKAKDNFEQAVKL 98
>gi|398335102|ref|ZP_10519807.1| hypothetical protein LkmesMB_05250 [Leptospira kmetyi serovar
Malaysia str. Bejo-Iso9]
Length = 1197
Score = 47.4 bits (111), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 36/192 (18%), Positives = 84/192 (43%), Gaps = 27/192 (14%)
Query: 135 REEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADI 194
R+ ++ + G + K P + ++H+ +G+++ + + ++ S++++ L AD
Sbjct: 688 RKGELDKAEAGFKEILSKKPDSYYSHYQMGIIHLQRKKYDASIDSFDRS----LLLNADF 743
Query: 195 ARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTL 254
+ + +H SG+ L KE + + +MQ D+ + +
Sbjct: 744 VAARIGKGISTYH--------SGNKKLAKE-----------EFEAAMQQDSANELAPYNI 784
Query: 255 GLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQN 314
G+IL +I++ ++ +P D + Y++ GD+EQ+ K + + ++N
Sbjct: 785 GIILFNDNLYNEAITIFKEIIQKNPEFSDAHYQISYIYYKRGDLEQAEKEIRKALDLERN 844
Query: 315 HPAALINYAALL 326
IN AL+
Sbjct: 845 E----INLFALI 852
>gi|168054571|ref|XP_001779704.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668902|gb|EDQ55500.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 922
Score = 47.4 bits (111), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 77/176 (43%), Gaps = 21/176 (11%)
Query: 228 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 287
+ + ++K +E+++ + + A + + L + G + +I S + + PN CD N
Sbjct: 46 HDFDMCIAKNEEAIRIEPQFAECYGNMANALKEKGNIDLAIQYYSVAIELKPNFCDAWSN 105
Query: 288 LGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL 347
L AY + G ++++A+C Q AL L L A +N G L
Sbjct: 106 LASAYMRKGRLQEAAECCQH----------------ALTL---NPRLVDAHSNLGN--LL 144
Query: 348 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 403
+ A C + A++ P A W+NLA G+ + + ++A +L+PN
Sbjct: 145 KAQGLTHHAYLCYVEAIRLQPTFAIAWSNLAGLLMEAGELQKALAYYKEAIRLKPN 200
Score = 45.4 bits (106), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 35/172 (20%), Positives = 69/172 (40%), Gaps = 21/172 (12%)
Query: 231 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 290
+E +S S+Q A+ + L + + G L +I L +D + + NLG
Sbjct: 219 QEAISCYNRSIQLRPDYAIAYGNLASVYYEQGLLDYAILYYKQALLLDSSFIEAYNNLGN 278
Query: 291 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQA 350
A +G +E+S C+++ + NHP AL N + + +
Sbjct: 279 ALKDAGRVEESISCYENCLQLQNNHPQALTNLGNIYM---------------------EW 317
Query: 351 SAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 402
+ ++ A A L + ++NLA Y G++ + C + +++P
Sbjct: 318 NMISTAATFYKATLSVTTGLSAPYSNLATIYKQQGNYADAIACYNEVMRVDP 369
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 107/264 (40%), Gaps = 36/264 (13%)
Query: 151 RKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQ------ 204
R P A AH LG + + +G+ +A+S Y ++ I LR + IA L S+
Sbjct: 196 RLKPNFADAHLNLGNVLKAIGRHQEAISCYNRS--IQLRPDYAIAYGNLASVYYEQGLLD 253
Query: 205 ---IHHAQCLLPESS---GDNSLDKEL-EPEELEEILSKLKESMQSDTRQAVVWNTLGLI 257
+++ Q LL +SS N+L L + +EE +S + +Q LG I
Sbjct: 254 YAILYYKQALLLDSSFIEAYNNLGNALKDAGRVEESISCYENCLQLQNNHPQALTNLGNI 313
Query: 258 LLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPA 317
++ + ++ + + L+V NL Y Q G+ + C+ +++ D
Sbjct: 314 YMEWNMISTAATFYKATLSVTTGLSAPYSNLATIYKQQGNYADAIACYNEVMRVDPMAAD 373
Query: 318 ALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANL 377
L+N G L + V+ A + + A+ P A ANL
Sbjct: 374 GLVN---------------------RGNTLKEIGRVSEAIQDYIRAVAIRPTMAEAHANL 412
Query: 378 ANAYYLTGDHRSSGKCLEKAAKLE 401
A+AY +G ++ K ++A L
Sbjct: 413 ASAYKDSGHVEAAIKSYKQALFLR 436
>gi|189218643|ref|YP_001939284.1| TPR repeats containing protein [Methylacidiphilum infernorum V4]
gi|189185501|gb|ACD82686.1| TPR repeats containing protein [Methylacidiphilum infernorum V4]
Length = 294
Score = 47.4 bits (111), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 71/159 (44%), Gaps = 26/159 (16%)
Query: 150 ARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQ 209
+R+ P+ A HF LGL Y+ LG+ KA Y+KA LR + D + A
Sbjct: 101 SREFPQEAAPHFFLGLAYESLGRYRKATGEYKKA----LRLKEDFPK-----------AW 145
Query: 210 CLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSIS 269
C L S L + + + K +++ A W+ LG ++ G +S+I+
Sbjct: 146 CNL--GSCYVYLKR------YSKAIEAFKRAIEEYPSFARAWSNLGGCYIELGDYRSAIN 197
Query: 270 VLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDL 308
L +++ P+ + NLG AY G++++ K L
Sbjct: 198 ALEKAISLRPDLPEAWCNLGSAY---GEIKEYKKAIDSL 233
Score = 39.7 bits (91), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 29/60 (48%)
Query: 344 GACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 403
G+C + A E A++ P A W+NL Y GD+RS+ LEKA L P+
Sbjct: 149 GSCYVYLKRYSKAIEAFKRAIEEYPSFARAWSNLGGCYIELGDYRSAINALEKAISLRPD 208
>gi|83311456|ref|YP_421720.1| SPY protein [Magnetospirillum magneticum AMB-1]
gi|82946297|dbj|BAE51161.1| SPY protein [Magnetospirillum magneticum AMB-1]
Length = 798
Score = 47.4 bits (111), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 66/165 (40%), Gaps = 13/165 (7%)
Query: 252 NTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILK 311
LG L +GR ++ LA++PN+ + ++G+A + G E++A+CF+ +
Sbjct: 176 GNLGGALFAAGRWADAVGAWGRALALEPNHAEVRADMGVALAKLGRQEEAAECFRRAMEL 235
Query: 312 DQNHPAALINYAALL--LCK-------YGSVLA----GAGANTGEGACLDQASAVNVAKE 358
D +PA N L L + Y V+A A A+ G + + A
Sbjct: 236 DPGNPAHGYNLGRALQDLGRLEDAAEIYAKVIAVAPDHASAHMNSGVIFKKLGQPDQAVA 295
Query: 359 CLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 403
L+ DP W N A Y G + A +L P+
Sbjct: 296 SYDRVLELDPANGPAWLNRGKALYEAGRVEDALDSFRSALRLMPD 340
>gi|343502640|ref|ZP_08740486.1| TPR repeat-containing protein [Vibrio tubiashii ATCC 19109]
gi|418481255|ref|ZP_13050303.1| hypothetical protein VT1337_22459 [Vibrio tubiashii NCIMB 1337 =
ATCC 19106]
gi|342813759|gb|EGU48718.1| TPR repeat-containing protein [Vibrio tubiashii ATCC 19109]
gi|384571207|gb|EIF01745.1| hypothetical protein VT1337_22459 [Vibrio tubiashii NCIMB 1337 =
ATCC 19106]
Length = 335
Score = 47.4 bits (111), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 74/160 (46%), Gaps = 14/160 (8%)
Query: 258 LLKSGRLQSSISVLS-----SLLAV--DPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 310
L GR+ S + L+ L+A+ +PNN + LGI Y ++GD+EQ F +
Sbjct: 87 LFNIGRIHQSRNNLALAEKAYLIAIEENPNNIKVLEQLGILYSRNGDIEQGRSYFLRAVN 146
Query: 311 KDQ--NHPAALINYAALLLCKYGSVL-----AGAGANTGEGACLDQASAVNVAKECLLAA 363
DQ + A + L+ K + L + A G G D +A+ A
Sbjct: 147 ADQLRFNNAETLESEDLVTVKSVTNLKVDQHSPEYAFMGLGVAADLDKQHELAQAFYKQA 206
Query: 364 LKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 403
L +P++ N+ ++Y++GD+R + + + +A ++P+
Sbjct: 207 LSIEPESVKTLTNVGYSFYMSGDYRKAQRFVLQALDIDPD 246
>gi|397690319|ref|YP_006527573.1| TPR repeat-containing protein [Melioribacter roseus P3M]
gi|395811811|gb|AFN74560.1| TPR repeat-containing protein [Melioribacter roseus P3M]
Length = 470
Score = 47.4 bits (111), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 60/307 (19%), Positives = 111/307 (36%), Gaps = 68/307 (22%)
Query: 135 REEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADI 194
++EK + K P A + LG Y+ +G+ A+++YE + D
Sbjct: 152 KKEKYNEAVEYFRMAVEKAPDYLEAWYELGYCYESMGELKDALAAYE------MYLNGD- 204
Query: 195 ARPELLSLVQIHHAQCLLPESSGD--NSLDKELEPEELEEILSKLKESMQSDTRQAVVWN 252
PE+ N L EE E+ ++ + S+ + W
Sbjct: 205 ------------------PENYAGWYNKGIVHLRLEEFEKAINAFELSIALKDDFSSSWF 246
Query: 253 TLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKD 312
G K+G+ + +++ L +DP++ NLG Y + G + + KC+ + I D
Sbjct: 247 NCGYAYYKTGKYKQAMTAYKKALKIDPDDETIYYNLGQTYEEMGSIANAIKCYTEAINLD 306
Query: 313 QNHPAALINYAALLLCKYGSVLAGAGANTGEG----ACLDQASAVNVAKECLLA------ 362
++ Y + LA G A D A+ +A E + A
Sbjct: 307 PDY--------------YEAYLARGNCYDASGKFQLALRDFNKAITIASEPVDAWYAKAD 352
Query: 363 -----------------ALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 405
A++ DP + W LA A++ G+ S K ++ +++ N
Sbjct: 353 LEYSLGKLNESIESYKNAVEIDPDNFNGWLKLAEAFFEVGNWLESLKAYKECIRIDKNYA 412
Query: 406 STRYAVA 412
Y++A
Sbjct: 413 RAYYSIA 419
>gi|333986950|ref|YP_004519557.1| hypothetical protein MSWAN_0723 [Methanobacterium sp. SWAN-1]
gi|333825094|gb|AEG17756.1| Tetratricopeptide TPR_1 repeat-containing protein [Methanobacterium
sp. SWAN-1]
Length = 401
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 65/336 (19%), Positives = 127/336 (37%), Gaps = 35/336 (10%)
Query: 228 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 287
E E L ++++ D VW G +K + + ++ L +DPN N
Sbjct: 60 ENYPESLECYDKALELDPNYFNVWYNKGYTFVKLEKYREALECYDKALELDPNYFGVWFN 119
Query: 288 LGIAYFQSGDMEQSAKCFQDLILKDQNHPAALIN--YAALLLCKYGSVLAGAGANTG--- 342
G A + G+ ++ +C+ + + D N+ N YA L +Y + G
Sbjct: 120 KGYALTELGEYLEALECYDEALELDPNYFGVWFNKGYALTELGEYSEAVKSYDTALGIDP 179
Query: 343 --------EGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCL 394
G L + A E AL+ +PK + W +A H + +
Sbjct: 180 SDATTWYNRGNILTKLKKYVEAIESYDKALEINPKFTYAWTGRGSALTELKKHLEAVESY 239
Query: 395 EKAAKLEPNCMSTRYAVAVSRIKDAERSQEPTEQLSWAGNEMASILREGDPVQIEP--PI 452
+KA +++P + + S L+ G + ++ ++I+P PI
Sbjct: 240 DKALEIDPKHVLAWFNRGYS--------------LAALGKYLEAVKSYDRALEIDPGDPI 285
Query: 453 AW--AGFAAVQKTHHEVAAAFETEENELS--KMEECAGAGESAFLDQASAVNVAKECLLA 508
W G+A + + + A E+ + L+ ++ A ++ + + A E
Sbjct: 286 TWFSKGYALAELGKY--SDALESYDKALAIDPIDSIALYNKANIMLEIGKYPEALESFDK 343
Query: 509 ALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKVL 544
AL+ DP + W + + +++ + KC EK L
Sbjct: 344 ALEIDPDYVNAWNDKGETFTKLENYQEALKCYEKAL 379
Score = 39.7 bits (91), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 51/250 (20%), Positives = 90/250 (36%), Gaps = 44/250 (17%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 213
P +A + G + +L + ++A+ SY+KA EI P+
Sbjct: 179 PSDATTWYNRGNILTKLKKYVEAIESYDKALEI---------NPKF--------TYAWTG 221
Query: 214 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 273
S L K LE E ++++ D + + W G L G+ ++
Sbjct: 222 RGSALTELKKHLEAVE------SYDKALEIDPKHVLAWFNRGYSLAALGKYLEAVKSYDR 275
Query: 274 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSV 333
L +DP + + G A + G + + + + D AL N A ++L
Sbjct: 276 ALEIDPGDPITWFSKGYALAELGKYSDALESYDKALAIDPIDSIALYNKANIML------ 329
Query: 334 LAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKC 393
+ A E AL+ DP + W + + +++ + KC
Sbjct: 330 ---------------EIGKYPEALESFDKALEIDPDYVNAWNDKGETFTKLENYQEALKC 374
Query: 394 LEKAAKLEPN 403
EKA KL+PN
Sbjct: 375 YEKALKLDPN 384
>gi|339494606|ref|YP_004714899.1| cytochrome c-type biogenesis protein [Pseudomonas stutzeri ATCC
17588 = LMG 11199]
gi|338801978|gb|AEJ05810.1| cytochrome c-type biogenesis protein [Pseudomonas stutzeri ATCC
17588 = LMG 11199]
Length = 406
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 81/197 (41%), Gaps = 23/197 (11%)
Query: 88 DVAEVEGKKINKLGKCRSRISSKMDSALEFGVD---ADGDQSGLGTSSSSREEKVSSLKT 144
D + KI KLG+ I++ + + +G+ D+ + S + V +
Sbjct: 78 DTENSDSPKIAKLGRSVPLIAAVLVPLVGYGLYMHWGASDKVQMARQFSEQPRTVEEMTA 137
Query: 145 GLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQ 204
L ++ P +A A + LG Y +P A ++ + E+ R +PELL Q
Sbjct: 138 HLEQAVKEQPDSAEAWYFLGRTYMNQERPADAAKAFARVVELAGR------QPELLG--Q 189
Query: 205 IHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRL 264
AQ +GD ++L+ + E++Q+D ++ LG+ + GR
Sbjct: 190 WAQAQYF----AGDRQWSEQLQ--------ALTDEALQADPQELTSLGLLGIAAYEEGRY 237
Query: 265 QSSISVLSSLLAVDPNN 281
Q ++ L+A P N
Sbjct: 238 QDAVRFWEQLVAALPEN 254
>gi|307152519|ref|YP_003887903.1| hypothetical protein Cyan7822_2660 [Cyanothece sp. PCC 7822]
gi|306982747|gb|ADN14628.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 7822]
Length = 543
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 116/275 (42%), Gaps = 38/275 (13%)
Query: 166 MYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESSGD-NSLDKE 224
+Y RLG+ L+ +++A ++ +A + P L + PE + D N L
Sbjct: 53 VYLRLGKALQKNQQFQEA--LIAYDKAFLINPRL----------NVEPELAKDLNRLGVA 100
Query: 225 LEPE-ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCD 283
L E +L + ++ + ++ D N LG LL Q + V + ++ DP N
Sbjct: 101 LSKENDLLDAITAYQRAVSVDPLLIEAQNNLGEALLSQEEWQEASQVFAQIIQFDPENAA 160
Query: 284 CIGNLGIAYFQSGDMEQSAKCFQD-LILKDQNHPAALINYAALLLCK----------YGS 332
NLG A+FQ Q+++ ++ L LK QN A +++ A L K Y
Sbjct: 161 AYTNLGNAFFQGEQWSQASEAYEKALELKPQN--ATILDRYAQALVKLERFQIAENIYLK 218
Query: 333 VLAGAGANTGE-----GACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDH 387
+ A N G+ G L Q + A AL+ PK A I+ NL A + +
Sbjct: 219 AITLA-PNRGDLYNGLGEVLYQQQKIPEAIAAYQQALRLGPKKAVIYKNLCYARHTQRQY 277
Query: 388 RSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERS 422
+ K +A L+P+ ++ I++ ER+
Sbjct: 278 EEALKLCRQARALDPSEGGAKF-----YIQEVERT 307
>gi|78213860|ref|YP_382639.1| hypothetical protein Syncc9605_2352 [Synechococcus sp. CC9605]
gi|78198319|gb|ABB36084.1| hypothetical protein Syncc9605_2352 [Synechococcus sp. CC9605]
Length = 400
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 59/134 (44%), Gaps = 22/134 (16%)
Query: 173 PLKAVSSYEKAEEILLRCEADI-ARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELE 231
P++AVS Y +A EI L + AR L + + +E LE
Sbjct: 253 PVQAVSCYRQALEIPLDTRVSLGARLNLAA---------------------RLMEQGNLE 291
Query: 232 EILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIA 291
E +S + + Q A+ W LGL+ + G L +++ LA+DPNN +C N +A
Sbjct: 292 EAISLTQTAAQRAPEVALAWYNLGLMQRRRGDLAAALEAYGRALALDPNNAECHQNNAVA 351
Query: 292 YFQSGDMEQSAKCF 305
G+++ + F
Sbjct: 352 QLLGGNIDAARSSF 365
>gi|334320210|ref|YP_004556839.1| FecR protein [Sinorhizobium meliloti AK83]
gi|407722853|ref|YP_006842514.1| FecR protein [Sinorhizobium meliloti Rm41]
gi|334097949|gb|AEG55959.1| FecR protein [Sinorhizobium meliloti AK83]
gi|407322913|emb|CCM71514.1| FecR protein [Sinorhizobium meliloti Rm41]
Length = 1197
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 75/175 (42%), Gaps = 21/175 (12%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
+LE L+ L+ ++++ + +WN+LGL+ G +++ + +A+DP + NL
Sbjct: 423 DLEGALADLERALKTAPGSSSIWNSLGLVQGARGDNRAAEAAFKQAIALDPLDPVAHANL 482
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLD 348
I Y M ++ + + D + AL+ G
Sbjct: 483 AIQYMDEMRMAEAKREIDAALSVDPSFDVALV---------------------ARGRYHM 521
Query: 349 QASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 403
Q + A E LLA A+P ++ LA A+Y GD + + L+ A +L+PN
Sbjct: 522 QNGEADNAVEDLLAGSTANPAYSNAQLLLAAAHYEKGDRIPAAQALDNADRLDPN 576
>gi|332020166|gb|EGI60610.1| Tetratricopeptide repeat protein 37 [Acromyrmex echinatior]
Length = 1306
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 71/176 (40%), Gaps = 34/176 (19%)
Query: 251 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGD-MEQSAKCFQDLI 309
W G I G S+ + + D NN +C+ LG Y + G+ +E+S +C+
Sbjct: 446 WLLFGKIYWDMGDYNHSLMAFLNGVQADRNNWECMVYLGHYYREHGNNIERSRRCY---- 501
Query: 310 LKDQNHPAALIN----YAALLLCKYGSVLAGAGAN-------TGEGA------------C 346
H A IN A + L +L AN T +G
Sbjct: 502 -----HAALQINPNSEEAGIGLSTAYRLLKNTDANIKLLQRVTMQGTGPRWAWLQLGLHY 556
Query: 347 LDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 402
LDQ A A L ++ADP H W +LA+AY G H S+ K ++A +L P
Sbjct: 557 LDQGDA-GQAITALQHVIRADPNDNHCWESLADAYLARGAHASALKSYQRALQLSP 611
>gi|443665625|ref|ZP_21133648.1| glycosyl transferase 2 family protein [Microcystis aeruginosa
DIANCHI905]
gi|443331339|gb|ELS46001.1| glycosyl transferase 2 family protein [Microcystis aeruginosa
DIANCHI905]
Length = 396
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Query: 226 EPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCI 285
E E+ E LS +++++ D A + LGL+L + RL SI L ++P+N
Sbjct: 282 EAEKYETALSVFEKTVEIDPSYADGYYNLGLVLKQLHRLPESIKAYKKALKLNPDNPTIY 341
Query: 286 GNLGIAYFQSGDMEQSAKCFQD--LILKDQ 313
NLG+AY G ++ + +Q +LKDQ
Sbjct: 342 QNLGVAYIVFGSYNEAIEIWQKGLQLLKDQ 371
>gi|298710892|emb|CBJ26401.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase,
family GT41 [Ectocarpus siliculosus]
Length = 1080
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 68/311 (21%), Positives = 119/311 (38%), Gaps = 27/311 (8%)
Query: 251 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 310
+N L ++ G + +I L ++ D NLG Y G + ++ +C+ + I
Sbjct: 143 YNNLASAYMQLGHTKEAIETYQMALVLNRGLVDAHSNLGNLYKAQGMLAEAKRCYLEAIR 202
Query: 311 KDQNHPAALINYAALL---------LCKYGSVLA----GAGANTGEGACLDQASAVNVAK 357
+ A N A + + Y + A A++ G L + V+ A
Sbjct: 203 IQPSFAIAWSNLAGIFKEEGNLTTAVAYYREAIRLCPEFADAHSNLGNVLKERGLVHDAM 262
Query: 358 ECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIK 417
+C A+K P A + NLA+ YY G + K A +LEPN + A + +
Sbjct: 263 QCYQTAIKLRPDFAIAYGNLASCYYDCGCQDLAIKTFRYAIQLEPN-----FPDAYNNLG 317
Query: 418 DAERSQEPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFAAVQKTHHEVAAAFETEENE 477
+A R + QL A N + LR ++ + P A+ K + A
Sbjct: 318 NALRE---SGQLEEAINCYRTTLR----LKPDHPHAYNNLGNAMKDKGLIKEAIHCYVTA 370
Query: 478 LSKMEECAGAGES--AFLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRS 535
+ M + A + + L + + A A+ DP A ++N+ NAY G
Sbjct: 371 VQLMPKFAAVHSNLGSVLKEQGKLAHALAHYHEAIAIDPGFADAYSNMGNAYKDMGRLPE 430
Query: 536 SGKCLEKVLMV 546
+ KC + +
Sbjct: 431 AIKCYSAAINI 441
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 76/183 (41%), Gaps = 13/183 (7%)
Query: 234 LSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYF 293
+ + ++Q + +N LG L +SG+L+ +I+ + L + P++ NLG A
Sbjct: 296 IKTFRYAIQLEPNFPDAYNNLGNALRESGQLEEAINCYRTTLRLKPDHPHAYNNLGNAMK 355
Query: 294 QSGDMEQSAKCFQDLILKDQNHPAALINYAALL---------LCKYGSVLA----GAGAN 340
G ++++ C+ + A N ++L L Y +A A A
Sbjct: 356 DKGLIKEAIHCYVTAVQLMPKFAAVHSNLGSVLKEQGKLAHALAHYHEAIAIDPGFADAY 415
Query: 341 TGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKL 400
+ G + A +C AA+ P A ++NLA+AY D + C KA L
Sbjct: 416 SNMGNAYKDMGRLPEAIKCYSAAINIKPTFADAFSNLASAYKEGNDVLQAIACYRKALSL 475
Query: 401 EPN 403
P+
Sbjct: 476 RPD 478
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 67/174 (38%), Gaps = 25/174 (14%)
Query: 248 AVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQD 307
A+ + L G +I + ++PN D NLG A +SG +E++ C++
Sbjct: 276 AIAYGNLASCYYDCGCQDLAIKTFRYAIQLEPNFPDAYNNLGNALRESGQLEEAINCYRT 335
Query: 308 LILKDQNHPAALINY-------------------AALLLCKYGSVLAGAGANTGEGACLD 348
+ +HP A N A L+ K+ +V + G+ E L
Sbjct: 336 TLRLKPDHPHAYNNLGNAMKDKGLIKEAIHCYVTAVQLMPKFAAVHSNLGSVLKEQGKLA 395
Query: 349 QASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 402
A A A+ DP A ++N+ NAY G + KC A ++P
Sbjct: 396 HALA------HYHEAIAIDPGFADAYSNMGNAYKDMGRLPEAIKCYSAAINIKP 443
Score = 42.4 bits (98), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 65/322 (20%), Positives = 114/322 (35%), Gaps = 63/322 (19%)
Query: 239 ESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDM 298
E+++ A+ W+ L I + G L ++++ + + P D NLG + G +
Sbjct: 199 EAIRIQPSFAIAWSNLAGIFKEEGNLTTAVAYYREAIRLCPEFADAHSNLGNVLKERGLV 258
Query: 299 EQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGE--------------- 343
+ +C+Q I + P I Y L C Y T
Sbjct: 259 HDAMQCYQTAI---KLRPDFAIAYGNLASCYYDCGCQDLAIKTFRYAIQLEPNFPDAYNN 315
Query: 344 -GACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 402
G L ++ + A C L+ P H + NL NA G + + C A +L P
Sbjct: 316 LGNALRESGQLEEAINCYRTTLRLKPDHPHAYNNLGNAMKDKGLIKEAIHCYVTAVQLMP 375
Query: 403 NCMSTRYAVAVSRIKDAERSQEPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFAAVQK 462
++A S + + Q G ++ + + I+P GFA
Sbjct: 376 -----KFAAVHSNLGSVLKEQ---------GKLAHALAHYHEAIAIDP-----GFA---D 413
Query: 463 THHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKADPKAAHIWAN 522
+ + A++ ++ ++ E A +C AA+ P A ++N
Sbjct: 414 AYSNMGNAYK----DMGRLPE------------------AIKCYSAAINIKPTFADAFSN 451
Query: 523 LANAYYLTGDHRSSGKCLEKVL 544
LA+AY D + C K L
Sbjct: 452 LASAYKEGNDVLQAIACYRKAL 473
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 69/165 (41%), Gaps = 21/165 (12%)
Query: 238 KESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGD 297
++ ++ D A ++ LG L + G + +I + + P CD NL AY Q G
Sbjct: 96 QQCIRIDPNFAEAYSNLGNALKELGDVGGAIQFYLKAVKLKPRFCDAYNNLASAYMQLGH 155
Query: 298 MEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAK 357
+++ + +Q AL+L + G V A++ G + AK
Sbjct: 156 TKEAIETYQ----------------MALVLNR-GLV----DAHSNLGNLYKAQGMLAEAK 194
Query: 358 ECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 402
C L A++ P A W+NLA + G+ ++ +A +L P
Sbjct: 195 RCYLEAIRIQPSFAIAWSNLAGIFKEEGNLTTAVAYYREAIRLCP 239
Score = 39.3 bits (90), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 41/80 (51%)
Query: 230 LEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLG 289
++E + ++Q + A V + LG +L + G+L +++ +A+DP D N+G
Sbjct: 360 IKEAIHCYVTAVQLMPKFAAVHSNLGSVLKEQGKLAHALAHYHEAIAIDPGFADAYSNMG 419
Query: 290 IAYFQSGDMEQSAKCFQDLI 309
AY G + ++ KC+ I
Sbjct: 420 NAYKDMGRLPEAIKCYSAAI 439
>gi|451982583|ref|ZP_21930892.1| exported hypothetical protein, contains TPR repeats [Nitrospina
gracilis 3/211]
gi|451760229|emb|CCQ92187.1| exported hypothetical protein, contains TPR repeats [Nitrospina
gracilis 3/211]
Length = 395
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 64/155 (41%), Gaps = 16/155 (10%)
Query: 265 QSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAA 324
Q I+ +S L DP + D LGIAY G+ + A +D I ++NH AL +
Sbjct: 27 QRRIAEYASRLQTDPQDADAHFQLGIAYLSMGNWKAGASHLKDTIRLNKNHTQALRD-LG 85
Query: 325 LLLCKYGSVLAG-------AGANTGEGACLDQASAVNVAKECLLAALK--------ADPK 369
L + G + A N + + AV +A+E AA+ DP
Sbjct: 86 WALYQMGDLAAAEKWLRQSYRLNAKDPKTVANLGAVLIARERYSAAVAVLDNSVPGGDPA 145
Query: 370 AAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNC 404
I NLA AY G+ + L A++L PN
Sbjct: 146 HFQIHNNLAIAYRHLGEKTKAANQLRIASRLAPNV 180
>gi|15606922|ref|NP_214303.1| hypothetical protein aq_1896 [Aquifex aeolicus VF5]
gi|2984175|gb|AAC07708.1| hypothetical protein aq_1896 [Aquifex aeolicus VF5]
Length = 342
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 18/76 (23%), Positives = 42/76 (55%)
Query: 232 EILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIA 291
E ++ ++++++ + +WN LGL +++ + + L+++PN + NLGI
Sbjct: 43 EAIANFHKALRANPDEPRIWNALGLAYMEAKEYKKAEESFKKALSINPNYSEARKNLGIL 102
Query: 292 YFQSGDMEQSAKCFQD 307
Y++ G E++ K Q+
Sbjct: 103 YYKLGRYEEALKYLQE 118
>gi|219850611|ref|YP_002465044.1| TPR repeat-containing serine/threonine protein kinase [Chloroflexus
aggregans DSM 9485]
gi|219544870|gb|ACL26608.1| serine/threonine protein kinase with TPR repeats [Chloroflexus
aggregans DSM 9485]
Length = 863
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 41/94 (43%)
Query: 216 SGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLL 275
+G + D E + + +E++ + A +N LG ILL R +I LS L
Sbjct: 718 TGFQNADNETAGDWYSQAEEAYREALNRNDYDAFAYNGLGWILLYQDRYDEAIEALSQAL 777
Query: 276 AVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLI 309
+D N + LG AYF S ++ FQ I
Sbjct: 778 RLDNQNAEIFNGLGWAYFYSNRYSEATTFFQQAI 811
>gi|363748450|ref|XP_003644443.1| hypothetical protein Ecym_1396 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888075|gb|AET37626.1| hypothetical protein Ecym_1396 [Eremothecium cymbalariae
DBVPG#7215]
Length = 573
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 41/194 (21%), Positives = 79/194 (40%), Gaps = 15/194 (7%)
Query: 237 LKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSG 296
+ ++Q + + A W LGL+ ++ + S I+ L L VDPNN + + I+Y G
Sbjct: 308 FEAAVQENRQHADAWLRLGLVQTQNEKELSGINALEHCLKVDPNNLTAMMTVAISYINEG 367
Query: 297 DMEQSAKC---------FQDLILKDQNHPAALINYAALLLCKYGSVL-----AGAGANTG 342
+ SA + +++ K + A + + ++ +Y V+ G
Sbjct: 368 -YDVSALTMLGKWLETKYPEVVQKRTDEQADRFSLSKVITDQYLKVINTLPEIDPDVQLG 426
Query: 343 EGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 402
G + +C AAL P +W L + + + + +A +L+P
Sbjct: 427 LGVLFYANDEFDKTIDCFKAALHVRPNDECMWNRLGASLANSNRSEEAIQAYHRAIQLKP 486
Query: 403 NCMSTRYAVAVSRI 416
+ RY +AVS +
Sbjct: 487 AFVRARYNLAVSSM 500
>gi|182677316|ref|YP_001831462.1| hypothetical protein Bind_0319 [Beijerinckia indica subsp. indica
ATCC 9039]
gi|182633199|gb|ACB93973.1| TPR repeat-containing protein [Beijerinckia indica subsp. indica
ATCC 9039]
Length = 301
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 47/103 (45%)
Query: 227 PEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIG 286
P+E L+ L + + + R + ++T G+ K G+ +IS S + +DPNN
Sbjct: 64 PQEASANLASLSDVVSRNPRSSEAYDTRGVAYAKLGKYSEAISDFSQAIKLDPNNAPAYT 123
Query: 287 NLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCK 329
N +AY QS + + F I + H A + A LL +
Sbjct: 124 NRALAYRQSNRNDAALADFNRAIEVNPRHAPAYLGRANLLRVQ 166
Score = 43.9 bits (102), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 71/175 (40%), Gaps = 21/175 (12%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 213
P NA A+ L Y++ + A++ + +A E+ R P L + Q L
Sbjct: 116 PNNAPAYTNRALAYRQSNRNDAALADFNRAIEVNPRHA-----PAYLGRANLLRVQGNLD 170
Query: 214 ESSGDNSLDKELEPEELE----------------EILSKLKESMQSDTRQAVVWNTLGLI 257
E+ D +L PE + + ++ ++ D + G
Sbjct: 171 EAKSDLDQAIKLNPENAQAFHARGLIYQREGNQPQAITDFDNAIDRDPFAGAPYLARGQS 230
Query: 258 LLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKD 312
L+ +G+ +I ++ L VD N D LG+AY +SG+ ++A+ +Q + D
Sbjct: 231 LIATGKYDKAIEDFNAALHVDNKNPDAWAGLGLAYEKSGNRTKAAESYQRALTFD 285
Score = 42.4 bits (98), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 57/277 (20%), Positives = 112/277 (40%), Gaps = 44/277 (15%)
Query: 126 SGLGTSSSSREEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEE 185
+G+ ++ ++ S+ L V + P+++ A+ G+ Y +LG+ +A+S + +A
Sbjct: 54 TGVAEVANQSPQEASANLASLSDVVSRNPRSSEAYDTRGVAYAKLGKYSEAISDFSQA-- 111
Query: 186 ILLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDT 245
++ + + A + + L S N + L+ +++ +
Sbjct: 112 --IKLDPNNA--------PAYTNRALAYRQSNRN-----------DAALADFNRAIEVNP 150
Query: 246 RQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCF 305
R A + +L G L + S L + ++P N G+ Y + G+ Q+ F
Sbjct: 151 RHAPAYLGRANLLRVQGNLDEAKSDLDQAIKLNPENAQAFHARGLIYQREGNQPQAITDF 210
Query: 306 QDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALK 365
+ I +D P A A L + S++A TG+ + A E AAL
Sbjct: 211 DNAIDRD---PFA----GAPYLARGQSLIA-----TGK---------YDKAIEDFNAALH 249
Query: 366 ADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 402
D K WA L AY +G+ + + ++A +P
Sbjct: 250 VDNKNPDAWAGLGLAYEKSGNRTKAAESYQRALTFDP 286
>gi|217978433|ref|YP_002362580.1| hypothetical protein Msil_2286 [Methylocella silvestris BL2]
gi|217503809|gb|ACK51218.1| TPR repeat-containing protein [Methylocella silvestris BL2]
Length = 291
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 46/99 (46%), Gaps = 1/99 (1%)
Query: 227 PEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIG 286
P+E + ++ L + +Q + A +NT G+ KSGR +I+ S + + P +
Sbjct: 55 PQEAQANIASLTDVVQRNPNSADAYNTRGVAYAKSGRYNEAIADFSQAIKIAP-TAASLT 113
Query: 287 NLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAAL 325
N +AY Q G + + F I D NH A + A L
Sbjct: 114 NRALAYRQIGRNDAALTDFNSAIAADANHAPAYLGRANL 152
Score = 40.4 bits (93), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 61/281 (21%), Positives = 108/281 (38%), Gaps = 49/281 (17%)
Query: 125 QSGLGTS---SSSREEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYE 181
+SG G + S S +E +++ + L V ++ P +A A+ G+ Y + G+ +A++ +
Sbjct: 42 KSGAGVAEVASQSPQEAQANIAS-LTDVVQRNPNSADAYNTRGVAYAKSGRYNEAIADFS 100
Query: 182 KAEEILLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESM 241
+A +I P SL + L G N + L+ ++
Sbjct: 101 QAIKIA---------PTAASLTN----RALAYRQIGRN-----------DAALTDFNSAI 136
Query: 242 QSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQS 301
+D A + + SG L ++ + L S + ++P N G+ Y + G+ Q+
Sbjct: 137 AADANHAPAYLGRANLERASGDLPAAHADLDSAIKLNPENAQAFHARGLIYQREGNHPQA 196
Query: 302 AKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLL 361
F + I +D P A Y A G L + A E
Sbjct: 197 ITDFDNAIDRD---PFAGAPYLA------------------RGQSLIAIGKYDKAIEDFN 235
Query: 362 AALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 402
AAL D K WA L AY +G+ + + +A +P
Sbjct: 236 AALNVDNKNPDAWAGLGLAYEKSGNRAKASESYSRAIVFDP 276
>gi|322432943|ref|YP_004210192.1| hypothetical protein AciX9_4094 [Granulicella tundricola MP5ACTX9]
gi|321165170|gb|ADW70874.1| Tetratricopeptide TPR_1 repeat-containing protein [Granulicella
tundricola MP5ACTX9]
Length = 663
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 81/207 (39%), Gaps = 33/207 (15%)
Query: 262 GRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALIN 321
G+ Q +I+ ++L + P++ + LG + G+ +++ + + I ++P AL N
Sbjct: 184 GQTQQAINSFENVLLLKPDDAETFNYLGTLFHLLGETDKAKESYLLAIKHKPDYPLALCN 243
Query: 322 YAALLLCKYGS------VLAGA--------GANTGEGACLDQASAVNVAKECLLAALKAD 367
ALL+ +G +L A A G+ L Q A E L L+ D
Sbjct: 244 LGALLM-DFGQWQVAEMMLRKAIELDPDLLAAYCNLGSVLAQQGNTVAAIEALRQVLQRD 302
Query: 368 PKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAV-------------- 413
P A L N GD + KC A K P TR+ ++
Sbjct: 303 PAHAEALCTLGNTMNNLGDEAGAMKCFHLALKANPGHALTRFNMSTLTLAAGNFAEGWPD 362
Query: 414 ----SRIKDAERSQEPTEQLSWAGNEM 436
+++++ R++ Q W G ++
Sbjct: 363 YELRWQVRESSRNERHLTQPRWTGEDL 389
>gi|409408369|ref|ZP_11256804.1| TPR repeat-containing protein [Herbaspirillum sp. GW103]
gi|386431691|gb|EIJ44519.1| TPR repeat-containing protein [Herbaspirillum sp. GW103]
Length = 691
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 52/102 (50%), Gaps = 2/102 (1%)
Query: 238 KESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGD 297
+ + + + + W+ LG+IL +SG+ ++ + L + A+ P N + NLG + + G
Sbjct: 95 RRATEQEPQLVAAWSNLGIILQESGKFEAGLQCLERVAALQPENAEVFNNLGNTFVRLGR 154
Query: 298 MEQSAKCFQDLILKDQNHPAALINYAALL--LCKYGSVLAGA 337
++Q+ + + + ++ A N A LL L +Y +A A
Sbjct: 155 LDQAQESYARALTLHPSYAEAHSNLAYLLHDLGRYDEAIAAA 196
>gi|242006797|ref|XP_002424231.1| smile protein, putative [Pediculus humanus corporis]
gi|212507600|gb|EEB11493.1| smile protein, putative [Pediculus humanus corporis]
Length = 963
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 80/203 (39%), Gaps = 41/203 (20%)
Query: 208 AQCLLPESSGDNSLDKELEPEELEEIL----------SKLKE---------SMQSDTRQA 248
A+ LLP++ S + P L L ++L+E SM++D QA
Sbjct: 505 AKSLLPKAKPGESYQTRIAPNHLNVFLNLANLIAKNVTRLEEADLLYRQAISMRADYTQA 564
Query: 249 VVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDL 308
+ G ILLK R + + V L D NN D NLG+ + + G Q+
Sbjct: 565 YI--NRGDILLKLNRTKEAQEVYERALFYDNNNPDIYYNLGVVFLEQGKASQALAYLDKA 622
Query: 309 ILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADP 368
+ D +H AL+N +A+LL + G V +A++ LL L D
Sbjct: 623 LEFDPDHEQALLN-SAILLQELGRV-----------------ELRKIARDRLLKLLNKDA 664
Query: 369 KAAHIWANLANAYYLTGDHRSSG 391
++ NL DH SG
Sbjct: 665 TNERVYFNLGML--AMDDHDVSG 685
>gi|146282886|ref|YP_001173039.1| cytochrome c-type biogenesis protein [Pseudomonas stutzeri A1501]
gi|145571091|gb|ABP80197.1| cytochrome c-type biogenesis protein [Pseudomonas stutzeri A1501]
Length = 406
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 81/197 (41%), Gaps = 23/197 (11%)
Query: 88 DVAEVEGKKINKLGKCRSRISSKMDSALEFGVD---ADGDQSGLGTSSSSREEKVSSLKT 144
D + KI KLG+ I++ + + +G+ D+ + S + V +
Sbjct: 78 DTENSDSPKIAKLGRSVPLIAAVLVPLVGYGLYMHWGASDKVQMARQFSEQPRTVEEMTA 137
Query: 145 GLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQ 204
L ++ P +A A + LG Y +P A ++ + E+ R +PELL Q
Sbjct: 138 HLEQAVKEQPDSAEAWYFLGRTYMNQERPADAAKAFARVVELAGR------QPELLG--Q 189
Query: 205 IHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRL 264
AQ +GD ++L+ + E++Q+D ++ LG+ + GR
Sbjct: 190 WAQAQYF----AGDRQWSEQLQ--------ALTDEALQADPQELTSLGLLGIAAYEEGRY 237
Query: 265 QSSISVLSSLLAVDPNN 281
Q ++ L+A P N
Sbjct: 238 QDAVRFWEQLVAALPEN 254
>gi|198283711|ref|YP_002220032.1| type IV pilus biogenesis/stability protein PilW [Acidithiobacillus
ferrooxidans ATCC 53993]
gi|198248232|gb|ACH83825.1| type IV pilus biogenesis/stability protein PilW [Acidithiobacillus
ferrooxidans ATCC 53993]
Length = 255
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 68/164 (41%), Gaps = 19/164 (11%)
Query: 240 SMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDME 299
S SD +A ++ +LG L+ G + +I L +A + D +G+AY Q +
Sbjct: 28 SANSDKAKAGIYTSLGTAYLQDGHPRQAIRELQLAIAANSRYADAYNVMGLAYEQLQQRD 87
Query: 300 QSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKEC 359
+ F+ + D +P L NY A L+ N GE AV K
Sbjct: 88 LARNAFRRALSLDAKNPEYLNNYGAFLIN---------SRNYGE--------AVIELKRA 130
Query: 360 LLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 403
L + P+ A W NLA AY D ++ L++A L PN
Sbjct: 131 TSDPLYSTPQFA--WTNLAQAYAGLKDLSAARDALDRALYLVPN 172
>gi|110597820|ref|ZP_01386103.1| TPR repeat:Tetratricopeptide TPR_3 [Chlorobium ferrooxidans DSM
13031]
gi|110340545|gb|EAT59028.1| TPR repeat:Tetratricopeptide TPR_3 [Chlorobium ferrooxidans DSM
13031]
Length = 592
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 44/219 (20%), Positives = 88/219 (40%), Gaps = 15/219 (6%)
Query: 199 LLSLVQIHHAQCLLPESSGD--NSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGL 256
++ L H AQ E + + N ++ E+E ++ +L + + + W LG
Sbjct: 252 IIDLPNRHAAQTKTNELATEWVNKVNAEVEQQDWISLLDICQRWSTAQPQNCSSWRYLGY 311
Query: 257 ILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHP 316
+++G L +I + ++P N +LG AY ++G + + +Q + D +
Sbjct: 312 AYIQNGELSKAIPAYQEAVRINPANAHYWSDLGAAYGRAGQQTKKIEAYQQAVSLDPDLE 371
Query: 317 AALINYAALL---------LCKYGSVLA----GAGANTGEGACLDQASAVNVAKECLLAA 363
+ IN L Y L AG+ T G + + E A
Sbjct: 372 NSWINLGIAYNENGNSEKSLNAYQQALRISPDNAGSWTQLGIIYGRIGRQDKQIESFQKA 431
Query: 364 LKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 402
++ + ++ W NL +AY TG + + ++A ++ P
Sbjct: 432 VRINSDYSNAWLNLGSAYQKTGQFAKAIEAFKQALRINP 470
Score = 38.5 bits (88), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 60/152 (39%), Gaps = 23/152 (15%)
Query: 279 PNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAG 338
P NC LG AY Q+G++ ++ +Q+ A IN A Y S L A
Sbjct: 300 PQNCSSWRYLGYAYIQNGELSKAIPAYQE---------AVRINPAN---AHYWSDLGAAY 347
Query: 339 ANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAA 398
G+ Q + E A+ DP + W NL AY G+ S ++A
Sbjct: 348 GRAGQ-----QTKKI----EAYQQAVSLDPDLENSWINLGIAYNENGNSEKSLNAYQQAL 398
Query: 399 KLEPNCMS--TRYAVAVSRIKDAERSQEPTEQ 428
++ P+ T+ + RI ++ E ++
Sbjct: 399 RISPDNAGSWTQLGIIYGRIGRQDKQIESFQK 430
>gi|427722230|ref|YP_007069507.1| hypothetical protein Lepto7376_0229 [Leptolyngbya sp. PCC 7376]
gi|427353950|gb|AFY36673.1| Tetratricopeptide TPR_1 repeat-containing protein [Leptolyngbya sp.
PCC 7376]
Length = 371
Score = 47.0 bits (110), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 63/291 (21%), Positives = 117/291 (40%), Gaps = 25/291 (8%)
Query: 159 AHFLLGLMYQRLGQPLKAVSSYEKAEEILLRC-EADIARPELLSLVQIHHAQCL------ 211
A F GL Y G+ ++SY+KA I +A R L + + + +
Sbjct: 73 AWFEQGLEYGAQGRYEDEIASYDKALAINPEFHDAWFYRGLALGFLNRYEDEVISYDRAI 132
Query: 212 -LPESSGDNSLDKELEPEELEEI---LSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSS 267
L ++GD ++ + E L +I ++ + + +++ A W G++L GR +
Sbjct: 133 TLQPNNGDTWFNRAVALENLGQIDAAITSYEAAGEANPEDAEAWYNRGILLGGLGRFEEE 192
Query: 268 ISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL- 326
I+ L++DP + D N G++ G +E+ + + + +D + A N
Sbjct: 193 IASYDKSLSIDPTSTDTWYNRGVSLGDLGRLEEEIESYDKALEQDPENQDAWYNRGVAFG 252
Query: 327 --------LCKYGSVLA----GAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIW 374
+ Y +LA A G L + A A++ DP+ ++
Sbjct: 253 LLGEFEKEIESYDILLALNPEDADTWYNRGISLSDLGQESEAIVSYREAIRLDPQRDIVF 312
Query: 375 ANLANAYYLTGDHRSSGKCLEKAAKLEP-NCMSTRYAVAVSRIKDAERSQE 424
N+A + G+ ++ LEKA +L P N V + + D R QE
Sbjct: 313 YNIAVSQVRLGEIDAALDSLEKAIELNPANRSFAETDVEFTELFDHPRFQE 363
>gi|74210446|dbj|BAE23402.1| unnamed protein product [Mus musculus]
Length = 942
Score = 47.0 bits (110), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 73/336 (21%), Positives = 134/336 (39%), Gaps = 50/336 (14%)
Query: 228 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 287
E+ EE + LKES++ A +++L +L + R + + + + + P++ D N
Sbjct: 622 EKTEEAIMLLKESIKYGPDFADAYSSLASLLAEQERFKEAEDIYQAGIKNCPDSSDLHNN 681
Query: 288 LGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL 347
+ SG E++ +Q I +H A++N G + G N+
Sbjct: 682 YAVFLVDSGFPEKAVAHYQQAIQLSPSHHVAVVNL--------GRLYRSLGENSK----- 728
Query: 348 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 407
A+E ALK + A + + L YY TG H+ + + +A L+P+
Sbjct: 729 --------AEEWYRRALKVA-RTAEVLSPLGALYYNTGRHKEALEVYREAVSLQPSQREL 779
Query: 408 RYAVA-----VSRIKDAERSQEPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFAAVQK 462
R A+A + + K+AE+ + S + +P +E + +A+
Sbjct: 780 RLALAQVLAVMGQTKEAEK--------------ITSHIVSEEPRCLE---CYRLLSAIHS 822
Query: 463 THHEVAAAFETEENELS-KMEECAGAGESAF-----LDQASAVNVAKECLLAALKADPKA 516
A E E L K ++ E F L + + ++ A E AA+ DP
Sbjct: 823 KQEHHGKALEAIEKALQLKPKDPKVISELFFTKGNQLREQNLLDKAFESYEAAVTLDPDQ 882
Query: 517 AHIWANLANAYYLTGDHRSSGKCLEKVLMVYCSSNL 552
A W N+ ++ G + S+ E+ L + S L
Sbjct: 883 AQAWMNMGGIRHIQGSYVSARAYYERALKLVPDSKL 918
>gi|118383764|ref|XP_001025036.1| TPR Domain containing protein [Tetrahymena thermophila]
gi|89306803|gb|EAS04791.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
Length = 670
Score = 47.0 bits (110), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 39/187 (20%), Positives = 75/187 (40%), Gaps = 15/187 (8%)
Query: 238 KESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGD 297
++++Q + + N LGL S + + S+ + L + PN+ D + N G +++ G
Sbjct: 392 QKAIQINPNNILALNNLGLAFQHSNQFEFSLQTYQNALKISPNDIDILNNQGTLFYKLGQ 451
Query: 298 MEQSAKCFQDLILKDQNHPAALINYAALLL--------CKYGSVLAGAGANTGE-----G 344
E++ F+ + + H ++ N L L KY L E G
Sbjct: 452 YEKAIASFKKALRINSEHNSSYFNLGMLYLKMQKYNKSIKYFESLVKMTPLDNEALFHLG 511
Query: 345 ACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNC 404
Q + + ALK P+ A N+ Y + S L+++ +L+P
Sbjct: 512 FSYKQVQNHQKSLKYFYQALKIAPQKAKYLFNIGQVYMEKLLKQKSYTYLQRSLQLKP-- 569
Query: 405 MSTRYAV 411
+S +Y +
Sbjct: 570 LSEKYVI 576
>gi|357610970|gb|EHJ67246.1| hypothetical protein KGM_00811 [Danaus plexippus]
Length = 667
Score = 47.0 bits (110), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 105/255 (41%), Gaps = 30/255 (11%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARP--ELLSLVQIHHAQCL 211
P + AH +G + LG+ +A ++Y KA+ +L + A+P + + +H
Sbjct: 286 PDDVGAHINVGRTFNHLGKYQEAEAAYVKAKSLLPK-----AKPGESYQARIAPNHLNVF 340
Query: 212 LPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVL 271
L + N + K E ++L + SM++D QA + G IL+K R + + V
Sbjct: 341 L---NLANLISKNATRLEEADMLYRQAISMRADYTQAYI--NRGDILIKLNRTKEAQEVY 395
Query: 272 SSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYG 331
L D N D NLG+ + G Q+ + + H AL+N +A+LL + G
Sbjct: 396 ERALLYDSGNPDIYYNLGVVLLEQGKASQALAYLDKALELEPEHEQALLN-SAILLQELG 454
Query: 332 SVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSG 391
+ A ++A++ LL L D + NL GD +
Sbjct: 455 A-----------------ADLRHLARQRLLKLLDKDATNERVHFNLGMVCMDEGDAECAE 497
Query: 392 KCLEKAAKLEPNCMS 406
+ A L+P+ S
Sbjct: 498 RWFRAAVHLKPDFRS 512
>gi|376296674|ref|YP_005167904.1| response regulator receiver [Desulfovibrio desulfuricans ND132]
gi|323459236|gb|EGB15101.1| response regulator receiver [Desulfovibrio desulfuricans ND132]
Length = 444
Score = 47.0 bits (110), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Query: 226 EPEELEEILSKLKESMQS--DTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCD 283
+P E+ L+K+ E+ S D ++N LG+ L G+ + +I +S L + P +
Sbjct: 300 DPGMSEKYLTKVLEAKGSRLDKEDIALFNKLGIALRGQGKWREAIDNYASALRISPEDEG 359
Query: 284 CIGNLGIAYFQSGDMEQSAKCFQ 306
N+G+AY+ GD ++ +CFQ
Sbjct: 360 LHYNMGMAYYDGGDKRRAGQCFQ 382
>gi|108805943|ref|YP_645880.1| hypothetical protein Rxyl_3161 [Rubrobacter xylanophilus DSM 9941]
gi|108767186|gb|ABG06068.1| Tetratricopeptide TPR_2 [Rubrobacter xylanophilus DSM 9941]
Length = 444
Score = 47.0 bits (110), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 69/147 (46%), Gaps = 21/147 (14%)
Query: 253 TLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKD 312
TLG L +G + ++ +L +DP N + LGI + + G+ +++ K F + + D
Sbjct: 284 TLGEARLANGDEEGAMDAYRRVLELDPENPEAHLELGILHDRRGERQRAEKHFLESLKAD 343
Query: 313 QNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAH 372
++P AL +YA + +GE + A+E L AL ADP +
Sbjct: 344 PSNPRALYSYANVYYT------------SGE---------LETAEELLARALAADPGYSP 382
Query: 373 IWANLANAYYLTGDHRSSGKCLEKAAK 399
+ LA+ G++ +S + LEKA +
Sbjct: 383 ALSALASIRARRGEYAASLEYLEKAVE 409
>gi|422003049|ref|ZP_16350282.1| TPR repeat-containing protein [Leptospira santarosai serovar
Shermani str. LT 821]
gi|417258270|gb|EKT87662.1| TPR repeat-containing protein [Leptospira santarosai serovar
Shermani str. LT 821]
gi|456875527|gb|EMF90728.1| tetratricopeptide repeat protein [Leptospira santarosai str. ST188]
Length = 1197
Score = 47.0 bits (110), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 34/169 (20%), Positives = 78/169 (46%), Gaps = 23/169 (13%)
Query: 135 REEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADI 194
R+ ++ +TG + K P + ++H+ +G+++ + + + S++++ +LL +
Sbjct: 688 RKGEIDKAETGFKEILAKKPDSYYSHYQMGIIHLQRKKYEASADSFDRS--LLLNIDFVA 745
Query: 195 ARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTL 254
AR + + ++H S +K+L EE E +MQ D+ + +
Sbjct: 746 AR--IGKGISLYH------------SGNKKLAKEEFEI-------AMQQDSANELAPYNI 784
Query: 255 GLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAK 303
G+IL +I++ ++ +P D + Y++ GD+EQ+ K
Sbjct: 785 GIILFNDNLYNEAITIFKEIIQKNPEFSDAHYQISYIYYKRGDLEQAEK 833
>gi|425466629|ref|ZP_18845927.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9809]
gi|389830795|emb|CCI26971.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9809]
Length = 403
Score = 47.0 bits (110), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Query: 226 EPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCI 285
E E+ E LS +++++ D A + LGL+L + RL SI L ++P+N
Sbjct: 289 EAEKYETALSIFEKTVEIDPSYADGYYNLGLVLKQLHRLPESIKAYKKALKLNPDNPTIY 348
Query: 286 GNLGIAYFQSGDMEQSAKCFQD--LILKDQ 313
NLG+AY G ++ + +Q +LKDQ
Sbjct: 349 QNLGVAYIAFGSYNEAIEIWQKGLQLLKDQ 378
>gi|323447882|gb|EGB03789.1| putative O-linked GlcNAc transferase [Aureococcus anophagefferens]
Length = 971
Score = 47.0 bits (110), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 75/178 (42%), Gaps = 13/178 (7%)
Query: 239 ESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDM 298
E+++ + A+ W+ L + G+L ++I+ + + P D NLG A + G++
Sbjct: 194 EAIRLNPAFAIAWSNLAGLFKDEGQLSTAIAYYREAIRLCPPFADVYSNLGSAMQEQGNL 253
Query: 299 EQSAKCFQDLILKDQNHPAALINYAALLLCKY---GSVLA----------GAGANTGEGA 345
++ +C+Q I + A N + LL + G+V A A G
Sbjct: 254 IEAKQCYQTAIRLRPDFAIAHGNLGSCLLTSHDAEGAVRALRHAIQLEPNFPDAYNNLGN 313
Query: 346 CLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 403
L + + A C AL+ P H ++NL A G R + C AA+L P+
Sbjct: 314 ALRSLAHMREAIACYRTALRLKPDHPHAYSNLGTAMRDRGLIREAIHCNVTAARLMPH 371
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 64/174 (36%), Gaps = 25/174 (14%)
Query: 248 AVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQD 307
A+ LG LL S + ++ L + ++PN D NLG A M ++ C++
Sbjct: 271 AIAHGNLGSCLLTSHDAEGAVRALRHAIQLEPNFPDAYNNLGNALRSLAHMREAIACYRT 330
Query: 308 LILKDQNHPAALINY-------------------AALLLCKYGSVLAGAGANTGEGACLD 348
+ +HP A N AA L+ + A G+ E LD
Sbjct: 331 ALRLKPDHPHAYSNLGTAMRDRGLIREAIHCNVTAARLMPHFAPAHANLGSLLREQGQLD 390
Query: 349 QASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 402
QA A A+ DP A + NL N Y + KC A K+ P
Sbjct: 391 QALA------HYHQAIALDPDFAEAYTNLGNTYRELCQFEDAIKCYTTALKIAP 438
Score = 43.1 bits (100), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 67/329 (20%), Positives = 118/329 (35%), Gaps = 39/329 (11%)
Query: 239 ESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDM 298
++++ R +N L + G++ +I L +DP D NLG G +
Sbjct: 126 KAIKYKPRFGDAYNNLATAHMHLGQVSDAIETYQMGLVIDPGLVDAHCNLGNLLKAQGKL 185
Query: 299 EQSAKCFQDLI----------------LKDQNHPAALINYA--ALLLC-KYGSVLAGAGA 339
E + +C+ + I KD+ + I Y A+ LC + V + G+
Sbjct: 186 EAARRCYLEAIRLNPAFAIAWSNLAGLFKDEGQLSTAIAYYREAIRLCPPFADVYSNLGS 245
Query: 340 NTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAK 399
E L + AK+C A++ P A NL + + D + + L A +
Sbjct: 246 AMQEQGNLIE------AKQCYQTAIRLRPDFAIAHGNLGSCLLTSHDAEGAVRALRHAIQ 299
Query: 400 LEPNCMSTRYAVAVSRIKDAERSQEPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFAA 459
LEPN + A + + +A RS E + R ++ + P A++
Sbjct: 300 LEPN-----FPDAYNNLGNALRSLAHMR-------EAIACYRTALRLKPDHPHAYSNLGT 347
Query: 460 VQKTHHEVAAAFETEENELSKMEECAGAGES--AFLDQASAVNVAKECLLAALKADPKAA 517
+ + A M A A + + L + ++ A A+ DP A
Sbjct: 348 AMRDRGLIREAIHCNVTAARLMPHFAPAHANLGSLLREQGQLDQALAHYHQAIALDPDFA 407
Query: 518 HIWANLANAYYLTGDHRSSGKCLEKVLMV 546
+ NL N Y + KC L +
Sbjct: 408 EAYTNLGNTYRELCQFEDAIKCYTTALKI 436
>gi|253698929|ref|YP_003020118.1| hypothetical protein GM21_0276 [Geobacter sp. M21]
gi|251773779|gb|ACT16360.1| Tetratricopeptide TPR_2 repeat protein [Geobacter sp. M21]
Length = 624
Score = 47.0 bits (110), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 83/197 (42%), Gaps = 17/197 (8%)
Query: 232 EILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIA 291
E ++ +E+++ + V LG + + G L ++ S + +DP D L
Sbjct: 323 EAIAAYEEALRRKEGSSAVLYNLGTLYERKGDLDQAMRRFSEAIRLDPEYGDARRRLAEI 382
Query: 292 YFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQAS 351
+ GD+ + +++L+ + ++P L Y L + G A A A + LDQ S
Sbjct: 383 HSVRGDLNAAIAQYRELVSRHGDNP--LSYYKLARLYEQGRQYADAIAAYSKAIELDQDS 440
Query: 352 AV---------------NVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEK 396
V A++ LL L+ DPK A L + Y + + K L+
Sbjct: 441 EVAHQGIARLYLKRKQAEEAEKHLLEVLRLDPKHAEARELLISLYVKARRYDDTEKLLKA 500
Query: 397 AAKLEPNCMSTRYAVAV 413
+A+L P+ + +Y + V
Sbjct: 501 SAELNPDSANDQYRLGV 517
>gi|164519037|ref|NP_945318.2| transmembrane and TPR repeat-containing protein 1 [Mus musculus]
gi|342187061|sp|Q3UV71.2|TMTC1_MOUSE RecName: Full=Transmembrane and TPR repeat-containing protein 1
Length = 942
Score = 47.0 bits (110), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 73/336 (21%), Positives = 134/336 (39%), Gaps = 50/336 (14%)
Query: 228 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 287
E+ EE + LKES++ A +++L +L + R + + + + + P++ D N
Sbjct: 622 EKTEEAIMLLKESIKYGPDFADAYSSLASLLAEQERFKEAEDIYQAGIKNCPDSSDLHNN 681
Query: 288 LGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL 347
+ SG E++ +Q I +H A++N G + G N+
Sbjct: 682 YAVFLVDSGFPEKAVAHYQQAIQLSPSHHVAVVNL--------GRLYRSLGENSK----- 728
Query: 348 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 407
A+E ALK + A + + L YY TG H+ + + +A L+P+
Sbjct: 729 --------AEEWYRRALKVA-RTAEVLSPLGALYYNTGRHKEALEVYREAVSLQPSQREL 779
Query: 408 RYAVA-----VSRIKDAERSQEPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFAAVQK 462
R A+A + + K+AE+ + S + +P +E + +A+
Sbjct: 780 RLALAQVLAVMGQTKEAEK--------------ITSHIVSEEPRCLE---CYRLLSAIHS 822
Query: 463 THHEVAAAFETEENELS-KMEECAGAGESAF-----LDQASAVNVAKECLLAALKADPKA 516
A E E L K ++ E F L + + ++ A E AA+ DP
Sbjct: 823 KQEHHGKALEAIEKALQLKPKDPKVISELFFTKGNQLREQNLLDKAFESYEAAVTLDPDQ 882
Query: 517 AHIWANLANAYYLTGDHRSSGKCLEKVLMVYCSSNL 552
A W N+ ++ G + S+ E+ L + S L
Sbjct: 883 AQAWMNMGGIRHIQGSYVSARAYYERALKLVPDSKL 918
>gi|416009428|ref|ZP_11561251.1| TPR domain/sulfotransferase domain protein [Acidithiobacillus sp.
GGI-221]
gi|339836569|gb|EGQ64152.1| TPR domain/sulfotransferase domain protein [Acidithiobacillus sp.
GGI-221]
Length = 695
Score = 47.0 bits (110), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 42/89 (47%)
Query: 238 KESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGD 297
+E++ D + + WN LG++L + GR S L + A +P N + NLG + D
Sbjct: 104 REALARDPQLSGAWNNLGILLQEMGRFDESREYLERVRAAEPKNPKVLNNLGNTCLRQRD 163
Query: 298 MEQSAKCFQDLILKDQNHPAALINYAALL 326
+ + ++ + D +P N A LL
Sbjct: 164 FSSAEQYWRQAMALDPAYPQPYSNLAKLL 192
Score = 42.4 bits (98), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 97/258 (37%), Gaps = 33/258 (12%)
Query: 230 LEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLG 289
L+ + L+++ S AV W+ L +L + G+L LA DP NLG
Sbjct: 62 LDPAIEYLRQACASPQAAAVYWSNLAEMLRQRGQLAEGERAAREALARDPQLSGAWNNLG 121
Query: 290 IAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQ 349
I + G ++S + + + + +P L N NT CL Q
Sbjct: 122 ILLQEMGRFDESREYLERVRAAEPKNPKVLNNL----------------GNT----CLRQ 161
Query: 350 ASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRY 409
+ A++ A+ DP ++NLA G+ ++ + +A L+P+
Sbjct: 162 RD-FSSAEQYWRQAMALDPAYPQPYSNLAKLLTDRGETEAAIEAGRRAITLDPHLTDAYI 220
Query: 410 AVAVSRIKDAERSQEPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFAAVQKTHHEVAA 469
+A + + ER Q P L W +A R G AW+ A + K +
Sbjct: 221 NLAAA---EQER-QNPAAALRWVEALLAFQPRNGQ--------AWSTKATLLKEAERLPE 268
Query: 470 AFETEENELSKMEECAGA 487
A + E + E A A
Sbjct: 269 ALQAAEQAVQHAPESADA 286
>gi|159029464|emb|CAO87611.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length = 403
Score = 47.0 bits (110), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Query: 226 EPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCI 285
E E+ E LS +++++ D A + LGL+L + RL SI L ++P+N
Sbjct: 289 EAEKYETALSVFEKTVEIDPSYADGYYNLGLVLKQLHRLPESIKAYKKALKLNPDNPTIY 348
Query: 286 GNLGIAYFQSGDMEQSAKCFQD--LILKDQ 313
NLG+AY G ++ + +Q +LKDQ
Sbjct: 349 QNLGVAYIVFGSYNEAIEIWQKGLQLLKDQ 378
>gi|145478081|ref|XP_001425063.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124392131|emb|CAK57665.1| unnamed protein product [Paramecium tetraurelia]
Length = 1339
Score = 47.0 bits (110), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 60/277 (21%), Positives = 106/277 (38%), Gaps = 36/277 (12%)
Query: 146 LVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQI 205
L+ A ++ + + H G++ Q+ Q KA+SSY+ A ++L P
Sbjct: 1052 LLQKASQIKDSPYIHNAYGIIAQKQKQTDKAISSYQMAIQLL---------PTF------ 1096
Query: 206 HHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQ 265
QCL N +E E+ + L LK+++++D A N LG++ K +L+
Sbjct: 1097 --PQCL------SNQATLLIETEKYSQALDLLKQALKTDQNNAEAHNNLGVLYYKQNKLE 1148
Query: 266 SSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAAL 325
S + + + +N + N G+ + D Q+ +CF + I + A N
Sbjct: 1149 LSQNEYMEAIKLKVHNPEAHSNQGVIFCAKQDYSQALQCFDEAIKLKSDFVKAYHNKGTT 1208
Query: 326 LLCK---------YGSVLAGAGAN----TGEGACLDQASAVNVAKECLLAALKADPKAAH 372
L K Y + + + L + A L A K P+ A
Sbjct: 1209 LYEKENFKEAVEIYDRAIKAKTQDPETYYNKSIALQGLEQFDDALNALEQAYKLAPEMAL 1268
Query: 373 IWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRY 409
++ Y G + K + A +L+PNC Y
Sbjct: 1269 LYVEKGTLMYRKGKVDEAIKNYDLAIQLQPNCAEAYY 1305
>gi|118385554|ref|XP_001025906.1| TPR Domain containing protein [Tetrahymena thermophila]
gi|89307673|gb|EAS05661.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
Length = 1032
Score = 47.0 bits (110), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 101/259 (38%), Gaps = 44/259 (16%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 213
PK+ + LG Y+ G +A+ SY+K EI + DI L
Sbjct: 505 PKDDDYYNGLGSAYKEKGLVDEAIKSYQKCLEI--NPKDDIYNYNL-------------- 548
Query: 214 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 273
G+ DK L L+E + ++S++ + + + LG+ G L +I
Sbjct: 549 ---GNAYDDKGL----LDEAIKSYQKSIEINPKNDSCYYNLGIAYKLKGLLDEAIKSYQK 601
Query: 274 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSV 333
L ++P N C NLGIAY + G ++++ K +Q I + N
Sbjct: 602 CLEINPKNDSCYYNLGIAYKEKGLLDEAIKSYQKSIEINPND---------------DDY 646
Query: 334 LAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKC 393
G G LDQ A+ ++C L+ +P + NL N Y G + K
Sbjct: 647 YKGLGNAYKAKGLLDQ--AIKSYQKC----LEINPNNDICYYNLGNTYKEIGLLDETIKS 700
Query: 394 LEKAAKLEPNCMSTRYAVA 412
+K+ ++ P Y++
Sbjct: 701 YQKSIEINPKDDDYYYSLG 719
Score = 45.8 bits (107), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 65/333 (19%), Positives = 136/333 (40%), Gaps = 45/333 (13%)
Query: 114 ALEFGVDADGDQSGLGTSSSSR---EEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRL 170
++E + D GLG + ++ ++ + S + L P N ++ LG Y+ +
Sbjct: 636 SIEINPNDDDYYKGLGNAYKAKGLLDQAIKSYQKCL----EINPNNDICYYNLGNTYKEI 691
Query: 171 GQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEE- 229
G + + SY+K+ EI + + SL + + LL E+ E+ P++
Sbjct: 692 GLLDETIKSYQKSIEINPKDD-----DYYYSLGSAYDDKGLLDEAIKSYQKCLEINPKDD 746
Query: 230 ---------------LEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSL 274
L+E ++ ++S++ + + +N+LG G L +I +
Sbjct: 747 ICYYNLGKAYKSKGLLDEAITSYQKSIEINPKDDDCYNSLGSAYDDKGLLDEAIQSYQNC 806
Query: 275 LAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVL 334
L ++P + C NLG Y + G ++++ + +Q+ I + + + N + CK +L
Sbjct: 807 LEINPMDDSCYYNLGNTYKEKGLLDEAIRSYQESIEINPENDSCYYNLG--IACKSKGLL 864
Query: 335 AGAGANTGE---------------GACLDQASAVNVAKECLLAALKADPKAAHIWANLAN 379
A + + G V+ A + ++++ +PK + +L N
Sbjct: 865 DKAIQSYQKCLEIHPKNDSCYYNLGKAYKSKGLVDEAIKSYQSSIEINPKVDAYYNSLGN 924
Query: 380 AYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVA 412
AY + G + K + K+ PN S Y +
Sbjct: 925 AYKVKGLLDEAIKSYQNCLKINPNYNSCYYKLG 957
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 109/272 (40%), Gaps = 32/272 (11%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLR---CEADIARPE----LLSLVQIH 206
PK+ ++ LG Y+ G +A++SY+K+ EI + C + LL
Sbjct: 743 PKDDICYYNLGKAYKSKGLLDEAITSYQKSIEINPKDDDCYNSLGSAYDDKGLLDEAIQS 802
Query: 207 HAQCL----LPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSG 262
+ CL + +S N + E L+E + +ES++ + + LG+ G
Sbjct: 803 YQNCLEINPMDDSCYYNLGNTYKEKGLLDEAIRSYQESIEINPENDSCYYNLGIACKSKG 862
Query: 263 RLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINY 322
L +I L + P N C NLG AY G ++++ K +Q I + +P Y
Sbjct: 863 LLDKAIQSYQKCLEIHPKNDSCYYNLGKAYKSKGLVDEAIKSYQSSI---EINPKVDAYY 919
Query: 323 AALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYY 382
+L G+ G LD+ A+ + C LK +P + L AY
Sbjct: 920 NSL-----GNAYKVKGL-------LDE--AIKSYQNC----LKINPNYNSCYYKLGQAYK 961
Query: 383 LTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVS 414
G + K +K ++ P S Y + ++
Sbjct: 962 SKGLLDEAIKSYQKYLEINPKNDSCYYNLGLA 993
Score = 39.7 bits (91), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 65/309 (21%), Positives = 119/309 (38%), Gaps = 49/309 (15%)
Query: 114 ALEFGVDADGDQSGLGTSSSSR---EEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRL 170
++E D +GLG++ ++ +E + S + L PKN + LG Y
Sbjct: 398 SIEINPKDDDYYNGLGSAYRAKSLLDEAIKSYQKCL----EINPKNDSCFYNLGNAYDDK 453
Query: 171 GQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEE- 229
G +A+ SY+K EI + DI +L + LL E+ E+ P++
Sbjct: 454 GLLDEAIKSYQKCLEI--NPKDDIC---YYNLGNTQKEKGLLDEAIKSYQKSIEINPKDD 508
Query: 230 ---------------LEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSL 274
++E + ++ ++ + + + LG G L +I
Sbjct: 509 DYYNGLGSAYKEKGLVDEAIKSYQKCLEINPKDDIYNYNLGNAYDDKGLLDEAIKSYQKS 568
Query: 275 LAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVL 334
+ ++P N C NLGIAY G ++++ K +Q + + +P K S
Sbjct: 569 IEINPKNDSCYYNLGIAYKLKGLLDEAIKSYQKCL---EINP------------KNDSCY 613
Query: 335 AGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCL 394
G E LD+A + +++ +P + L NAY G + K
Sbjct: 614 YNLGIAYKEKGLLDEAI------KSYQKSIEINPNDDDYYKGLGNAYKAKGLLDQAIKSY 667
Query: 395 EKAAKLEPN 403
+K ++ PN
Sbjct: 668 QKCLEINPN 676
>gi|374294026|ref|YP_005041049.1| hypothetical protein AZOLI_p30561 [Azospirillum lipoferum 4B]
gi|357427429|emb|CBS90373.1| conserved protein of unknown function (TPR domain protein)
[Azospirillum lipoferum 4B]
Length = 769
Score = 47.0 bits (110), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 97/268 (36%), Gaps = 48/268 (17%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPEL---LSLVQIHHAQC 210
P +A LLG + R G+P A+ Y A ++ A P L +L + A
Sbjct: 108 PDDADVLCLLGAILGRQGRPAPALRCYRTAARLV----PGAAEPRLGMGRALEDLRQAGA 163
Query: 211 LLPESSGDNSLDKELEPEE----------------LEEILSKLKESMQSDTRQAVVWNTL 254
L G L + P++ L E S +E+++ A VW L
Sbjct: 164 AL----GCYRLAARMRPQDPAIRIALANALRRCGLLGEAASAYRETLRLGVDNASVWANL 219
Query: 255 GLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQN 314
G L GRL + + L P++ + NLG+ G + + F+ + D
Sbjct: 220 GATLQGLGRLSDAEAAYVQALRRQPDHAETRNNLGLLLHAQGRHADARQRFRAALALDPA 279
Query: 315 HPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIW 374
H AL+N L A A G ++A+ A+ D + A W
Sbjct: 280 HLPALVN------------LGLAEAALGR---------YDLAERWQRRAIARDGRQAEGW 318
Query: 375 ANLANAYYLTGDHRSSGKCLEKAAKLEP 402
NL NA G + C ++A L P
Sbjct: 319 NNLGNACKAQGRREEAEDCWKRALALNP 346
>gi|421112475|ref|ZP_15572932.1| tetratricopeptide repeat protein [Leptospira santarosai str. JET]
gi|410802120|gb|EKS08281.1| tetratricopeptide repeat protein [Leptospira santarosai str. JET]
Length = 1197
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 34/169 (20%), Positives = 78/169 (46%), Gaps = 23/169 (13%)
Query: 135 REEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADI 194
R+ ++ +TG + K P + ++H+ +G+++ + + + S++++ +LL +
Sbjct: 688 RKGEIDKAETGFKEILAKKPDSYYSHYQMGIIHLQRKKYEASADSFDRS--LLLNIDFVA 745
Query: 195 ARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTL 254
AR + + ++H S +K+L EE E +MQ D+ + +
Sbjct: 746 AR--IGKGISLYH------------SGNKKLAKEEFEI-------AMQQDSANELAPYNI 784
Query: 255 GLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAK 303
G+IL +I++ ++ +P D + Y++ GD+EQ+ K
Sbjct: 785 GIILFNDNLYNEAITIFKEIIQKNPEFSDAHYQISYIYYKRGDLEQAEK 833
>gi|392954380|ref|ZP_10319931.1| hypothetical protein WQQ_40030 [Hydrocarboniphaga effusa AP103]
gi|391857037|gb|EIT67568.1| hypothetical protein WQQ_40030 [Hydrocarboniphaga effusa AP103]
Length = 232
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 36/73 (49%)
Query: 254 LGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQ 313
LG+I KS RLQ + S + +P N LGI Y +SG+ + + ++ +
Sbjct: 102 LGIIYAKSNRLQIATSAFNKAATSNPQNAAAFNWLGIVYRESGNYPMAQQAYEKALAVKP 161
Query: 314 NHPAALINYAALL 326
N+PA +N LL
Sbjct: 162 NYPAVHLNLGILL 174
>gi|186684446|ref|YP_001867642.1| hypothetical protein Npun_R4324 [Nostoc punctiforme PCC 73102]
gi|186466898|gb|ACC82699.1| TPR repeat-containing protein [Nostoc punctiforme PCC 73102]
Length = 763
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 77/191 (40%), Gaps = 13/191 (6%)
Query: 230 LEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLG 289
LEE ++ +++ + WN G+ L++ GRL+ +I+ L P++ N G
Sbjct: 551 LEEAIASYDQALNFKPDKDNAWNNRGIALVELGRLEEAIASYDQALNFKPDDHQAWYNRG 610
Query: 290 IAYFQSGDMEQSAKCF-QDLILKDQNHPAALINYAALL-LCKYGSVLAGAG--------- 338
IA F G +E++ F Q L K H A AL+ L + +A
Sbjct: 611 IALFNLGRLEEAIASFDQALNFKPDYHEAWYNRGTALVELGRLEEAIASFDQAIKIKSDD 670
Query: 339 --ANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEK 396
A G L + + A ALK P + W N A Y L G+ + + L++
Sbjct: 671 HQAWNNWGYALVKLERLEEAIASFDEALKIKPDKDNAWYNKACCYGLLGNVDLAIENLQQ 730
Query: 397 AAKLEPNCMST 407
+ L P T
Sbjct: 731 SINLNPKYRET 741
>gi|428221793|ref|YP_007105963.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Synechococcus sp. PCC 7502]
gi|427995133|gb|AFY73828.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Synechococcus sp. PCC 7502]
Length = 773
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 51/249 (20%), Positives = 99/249 (39%), Gaps = 51/249 (20%)
Query: 288 LGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL 347
L Y Q+GD+ ++ + ++ ++++ +H AN G
Sbjct: 8 LAFKYHQAGDLAEAERLYRQILIQQPHH---------------------IDANHLLGVLA 46
Query: 348 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 407
Q +VA + A+K +P+ + NL AY L+G + +KA KL+P+ T
Sbjct: 47 HQVGNYDVAIAYIETAIKLNPRNPDFYGNLGEAYRLSGKFTEAIASFQKALKLQPHNGKT 106
Query: 408 RYAVAVS---------RIKDAERSQEPTEQLSWAGNEMASILR-EGDPVQIEPPIAWAGF 457
Y + + I +R+ + L+ A + + +L+ +GD +
Sbjct: 107 HYNLGNALQAQGNLEQAISHYQRAIDLIPNLAQAHHNLGFLLKAQGDTTK--------AI 158
Query: 458 AAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKADPKAA 517
AA ++ A N L + A L ++ + A + + AL+ P++A
Sbjct: 159 AAYRQ-------ALAINPNYLQALHSLGNA-----LQESGLILEALDIYMKALELSPQSA 206
Query: 518 HIWANLANA 526
I+ +L NA
Sbjct: 207 EIYNDLGNA 215
>gi|428218345|ref|YP_007102810.1| hypothetical protein Pse7367_2115 [Pseudanabaena sp. PCC 7367]
gi|427990127|gb|AFY70382.1| Tetratricopeptide TPR_2 repeat-containing protein [Pseudanabaena
sp. PCC 7367]
Length = 628
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 66/166 (39%), Gaps = 21/166 (12%)
Query: 237 LKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSG 296
LK+++ D N LG G L +I A++P + D + NLGIAY + G
Sbjct: 94 LKQAIHLDPNNFGYLNNLGNFYRAVGALDQAIDCYDRAAAINPQSADSLLNLGIAYTEQG 153
Query: 297 DMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVA 356
+Q+ + ++ + HP A LL K LD+A A
Sbjct: 154 KSDQAIVTLEKALILNPLHPRAQTMLGDLLQAK---------------GNLDRAIA---- 194
Query: 357 KECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 402
AL P + + A+L A++ GD ++ E A +EP
Sbjct: 195 --SYTKALALQPNSFNALASLGMAFFRKGDLENAQHAYENALAIEP 238
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 84/174 (48%), Gaps = 25/174 (14%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 213
P++A + LG+ Y G+ +A+ + EKA ++L A+ L L+Q
Sbjct: 136 PQSADSLLNLGIAYTEQGKSDQAIVTLEKA--LILNPLHPRAQTMLGDLLQ--------- 184
Query: 214 ESSGDNSLDKELEPEELEEILSKLKE-SMQSDTRQAVVWNTLGLILLKSGRLQSSISVLS 272
+LD+ I S K ++Q ++ A+ +LG+ + G L+++
Sbjct: 185 ---AKGNLDR--------AIASYTKALALQPNSFNALA--SLGMAFFRKGDLENAQHAYE 231
Query: 273 SLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL 326
+ LA++P + D + N+G +++ G+++ + C++++I P A IN A LL
Sbjct: 232 NALAIEPLSIDALTNIGATFYERGNIKMALACYREVINIVPRSPTAHINLAFLL 285
Score = 42.0 bits (97), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 62/148 (41%), Gaps = 21/148 (14%)
Query: 255 GLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQN 314
GL L KSG L ++ + +SLLA P++ + G+ Q GD + + + + I D N
Sbjct: 44 GLALHKSGNLAAAKEIYASLLAKTPDHPRLLNYFGVLKGQMGDPKGAIELLKQAIHLDPN 103
Query: 315 HPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIW 374
+ L N G+ GA C D+A+A+N P++A
Sbjct: 104 NFGYLNN--------LGNFYRAVGALDQAIDCYDRAAAIN-------------PQSADSL 142
Query: 375 ANLANAYYLTGDHRSSGKCLEKAAKLEP 402
NL AY G + LEKA L P
Sbjct: 143 LNLGIAYTEQGKSDQAIVTLEKALILNP 170
>gi|218666334|ref|YP_002426340.1| type IV pilus biogenesis/stability protein PilW [Acidithiobacillus
ferrooxidans ATCC 23270]
gi|218518547|gb|ACK79133.1| type IV pilus biogenesis/stability protein PilW [Acidithiobacillus
ferrooxidans ATCC 23270]
Length = 249
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 68/164 (41%), Gaps = 19/164 (11%)
Query: 240 SMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDME 299
S SD +A ++ +LG L+ G + +I L +A + D +G+AY Q +
Sbjct: 22 SANSDKAKAGIYTSLGTAYLQDGHPRQAIRELQLAIAANSRYADAYNVMGLAYEQLQQRD 81
Query: 300 QSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKEC 359
+ F+ + D +P L NY A L+ N GE AV K
Sbjct: 82 LARNAFRRALSLDAKNPEYLNNYGAFLINS---------RNYGE--------AVIELKRA 124
Query: 360 LLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 403
L + P+ A W NLA AY D ++ L++A L PN
Sbjct: 125 TSDPLYSTPQFA--WTNLAQAYAGLKDLSAARDALDRALYLVPN 166
>gi|410449277|ref|ZP_11303336.1| tetratricopeptide repeat protein [Leptospira sp. Fiocruz LV3954]
gi|418745196|ref|ZP_13301537.1| tetratricopeptide repeat protein [Leptospira santarosai str.
CBC379]
gi|418753445|ref|ZP_13309691.1| tetratricopeptide repeat protein [Leptospira santarosai str.
MOR084]
gi|409966199|gb|EKO34050.1| tetratricopeptide repeat protein [Leptospira santarosai str.
MOR084]
gi|410016936|gb|EKO79009.1| tetratricopeptide repeat protein [Leptospira sp. Fiocruz LV3954]
gi|410793988|gb|EKR91902.1| tetratricopeptide repeat protein [Leptospira santarosai str.
CBC379]
Length = 1197
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 34/169 (20%), Positives = 78/169 (46%), Gaps = 23/169 (13%)
Query: 135 REEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADI 194
R+ ++ +TG + K P + ++H+ +G+++ + + + S++++ +LL +
Sbjct: 688 RKGEIDKAETGFKEILAKKPDSYYSHYQMGIIHLQRKKYEASADSFDRS--LLLNIDFVA 745
Query: 195 ARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTL 254
AR + + ++H S +K+L EE E +MQ D+ + +
Sbjct: 746 AR--IGKGISLYH------------SGNKKLAKEEFEI-------AMQQDSANELAPYNI 784
Query: 255 GLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAK 303
G+IL +I++ ++ +P D + Y++ GD+EQ+ K
Sbjct: 785 GIILFNDNLYNEAITIFKEIIQKNPEFSDAHYQISYIYYKRGDLEQAEK 833
>gi|395492794|ref|ZP_10424373.1| sulfotransferase [Sphingomonas sp. PAMC 26617]
Length = 707
Score = 47.0 bits (110), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 75/180 (41%), Gaps = 25/180 (13%)
Query: 148 HVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLS-LVQIH 206
HV P + A L+GLM G A+ +A C+A LS L ++
Sbjct: 28 HVLALWPGQSDALHLMGLMAHAYGNLDIAIDHLRRA------CQAPRVHATYLSNLAEMC 81
Query: 207 HAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQS 266
+ LLPE+ + + D WN LG+IL +SG+L+
Sbjct: 82 RQKGLLPEAE------------------DAARRGVTMDPAMVAGWNNLGIILQESGKLEE 123
Query: 267 SISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL 326
S+S L +LA+ P+ + NLG + G ++Q+ ++ + + A+ N + LL
Sbjct: 124 SLSCLERVLALQPDYPEAHNNLGNTLKRLGRLKQARGQYEAALRLSPAYAEAMSNLSNLL 183
>gi|222056573|ref|YP_002538935.1| hypothetical protein Geob_3491 [Geobacter daltonii FRC-32]
gi|221565862|gb|ACM21834.1| Tetratricopeptide TPR_2 repeat protein [Geobacter daltonii FRC-32]
Length = 264
Score = 47.0 bits (110), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 78/198 (39%), Gaps = 22/198 (11%)
Query: 232 EILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIA 291
E + +K ++ W +LG IL +SG+ + +I+ ++ + P D +LG+
Sbjct: 57 EAIESIKAGLKRAPEDIEAWTSLGDILFESGQHKEAIAAYKKVIELRPAEADGYVSLGLV 116
Query: 292 YFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQAS 351
Y +E++ Q N L + L G + G G N DQA
Sbjct: 117 Y---NSLERADDALQAF-----NKALELDPHNVFALNALGDLYYGLGNN-------DQAI 161
Query: 352 AVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAV 411
E + DP A NL + +Y GD S+ K +A +L+PN + Y
Sbjct: 162 ------EAYRKGIALDPNDAAARFNLGDLFYDLGDLESAEKETLEAVRLDPN-FTMSYLT 214
Query: 412 AVSRIKDAERSQEPTEQL 429
+ D ER E T+
Sbjct: 215 LGNICIDQERLAEATKYF 232
Score = 42.4 bits (98), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 75/172 (43%), Gaps = 27/172 (15%)
Query: 132 SSSREEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCE 191
+ + E + S+K GL ++ P++ A LG + GQ +A+++Y+K E L E
Sbjct: 52 TGKQAEAIESIKAGL----KRAPEDIEAWTSLGDILFESGQHKEAIAAYKKVIE-LRPAE 106
Query: 192 ADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVW 251
AD +SL ++ NSL E ++ L ++++ D
Sbjct: 107 AD----GYVSLGLVY------------NSL------ERADDALQAFNKALELDPHNVFAL 144
Query: 252 NTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAK 303
N LG + G +I +A+DPN+ NLG ++ GD+E + K
Sbjct: 145 NALGDLYYGLGNNDQAIEAYRKGIALDPNDAAARFNLGDLFYDLGDLESAEK 196
Score = 38.5 bits (88), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 67/173 (38%), Gaps = 23/173 (13%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 213
P NA +F LG G+ +A+ S + L R DI L + Q
Sbjct: 36 PDNAEGYFYLGEALAETGKQAEAIESIKAG---LKRAPEDIEAWTSLGDILFESGQH--- 89
Query: 214 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 273
+E ++ K+ ++ +A + +LGL+ R ++ +
Sbjct: 90 -----------------KEAIAAYKKVIELRPAEADGYVSLGLVYNSLERADDALQAFNK 132
Query: 274 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL 326
L +DP+N + LG Y+ G+ +Q+ + ++ I D N AA N L
Sbjct: 133 ALELDPHNVFALNALGDLYYGLGNNDQAIEAYRKGIALDPNDAAARFNLGDLF 185
>gi|115378507|ref|ZP_01465664.1| tetratricopeptide repeat family [Stigmatella aurantiaca DW4/3-1]
gi|310819976|ref|YP_003952334.1| hypothetical protein STAUR_2709 [Stigmatella aurantiaca DW4/3-1]
gi|115364476|gb|EAU63554.1| tetratricopeptide repeat family [Stigmatella aurantiaca DW4/3-1]
gi|309393048|gb|ADO70507.1| tetratricopeptide repeat protein [Stigmatella aurantiaca DW4/3-1]
Length = 1369
Score = 47.0 bits (110), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 41/79 (51%)
Query: 228 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 287
E L E +++ KE+++ D A + LG L++ ++ +I S LA DP +G
Sbjct: 1200 ERLPEAIAEWKETIKRDPNHADTYEQLGKAYLETNKMDEAIPAFESALAADPKRKRVLGA 1259
Query: 288 LGIAYFQSGDMEQSAKCFQ 306
+G +F G +++ + ++
Sbjct: 1260 IGDVFFSEGRWDEAIRRYE 1278
Score = 39.7 bits (91), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 39/79 (49%)
Query: 234 LSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYF 293
+ ++K +++ +A LG+I + RL +I+ + DPN+ D LG AY
Sbjct: 1172 IDQMKSAVEKAPHRADYHYALGVIYRDAERLPEAIAEWKETIKRDPNHADTYEQLGKAYL 1231
Query: 294 QSGDMEQSAKCFQDLILKD 312
++ M+++ F+ + D
Sbjct: 1232 ETNKMDEAIPAFESALAAD 1250
>gi|118365236|ref|XP_001015839.1| TPR Domain containing protein [Tetrahymena thermophila]
gi|89297606|gb|EAR95594.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
Length = 430
Score = 47.0 bits (110), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 58/278 (20%), Positives = 101/278 (36%), Gaps = 31/278 (11%)
Query: 250 VWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLI 309
+ N LIL +L I +L + L +P + D + +LG+ Y +S +C
Sbjct: 5 LLNCFNLILQTDNQLLQQIELLKNSLKNNPQDIDTLSSLGLCYQIQKQYNESIQC----- 59
Query: 310 LKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPK 369
LI + YG+ A +G + AK+ LL +L+ +PK
Sbjct: 60 ---------LIECQKIAPQNYGAYFNLAQVYISQG-------KLEEAKKQLLRSLEIEPK 103
Query: 370 AAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQEPTEQL 429
+H + L+ YY G + + ++ K P ++A + + D Q
Sbjct: 104 YSHPYFQLSQIYYQQGMLEEAKQNIQNYLKFNP-----QHAESYLFLADINEQMNNLNQA 158
Query: 430 SWAGNEMASILREGDPVQIEPPIAWAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGE 489
E I + D ++ I + T A +++ + A
Sbjct: 159 KKCYQEAIKINPKDDQTYLKLGILNLKMELFEDTKQCYLEAL-----KINTLNTQAHNYL 213
Query: 490 SAFLDQASAVNVAKECLLAALKADPKAAHIWANLANAY 527
F Q + AK +L AL+ DP+ A + NL Y
Sbjct: 214 GLFYLQIKKLKEAKNQILKALEIDPQLAITYVNLGKVY 251
>gi|425462685|ref|ZP_18842152.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9808]
gi|389824244|emb|CCI26980.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9808]
Length = 403
Score = 47.0 bits (110), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Query: 226 EPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCI 285
E E+ E LS +++++ D A + LGL+L + RL SI L ++P+N
Sbjct: 289 EAEKYETALSVFEKTVEIDPSYADGYYNLGLVLKQLHRLPESIKAYKKALKLNPDNPTIY 348
Query: 286 GNLGIAYFQSGDMEQSAKCFQD--LILKDQ 313
NLG+AY G ++ + +Q +LKDQ
Sbjct: 349 QNLGVAYIVFGSYNEAIEIWQKGLQLLKDQ 378
>gi|359684210|ref|ZP_09254211.1| TPR repeat-containing protein [Leptospira santarosai str.
2000030832]
Length = 1197
Score = 47.0 bits (110), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 34/169 (20%), Positives = 78/169 (46%), Gaps = 23/169 (13%)
Query: 135 REEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADI 194
R+ ++ +TG + K P + ++H+ +G+++ + + + S++++ +LL +
Sbjct: 688 RKGEIDKAETGFKEILAKKPDSYYSHYQMGIIHLQRKKYEASADSFDRS--LLLNIDFVA 745
Query: 195 ARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTL 254
AR + + ++H S +K+L EE E +MQ D+ + +
Sbjct: 746 AR--IGKGISLYH------------SGNKKLAKEEFEI-------AMQQDSANELAPYNI 784
Query: 255 GLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAK 303
G+IL +I++ ++ +P D + Y++ GD+EQ+ K
Sbjct: 785 GIILFNDNLYNEAITIFKEIIQKNPEFSDAHYQISYIYYKRGDLEQAEK 833
>gi|91204151|emb|CAJ71804.1| conserved hypothetical tpr repeat protein [Candidatus Kuenenia
stuttgartiensis]
Length = 817
Score = 47.0 bits (110), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 101/248 (40%), Gaps = 38/248 (15%)
Query: 72 SSSHHDKGSILMSKEM-DVAEVEGKKINKLGKCRSRISSKMDSALEFGVDADGDQSGLGT 130
+ +HH+ G + SK M + AE E KK LE + G LG
Sbjct: 419 ARAHHNLGVVYNSKGMYEKAEYEYKK-----------------TLEIKPNDAGAYYNLG- 460
Query: 131 SSSSREEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRC 190
+ R+E + + P +A A+ +G +Y++ Q AV YEKA +RC
Sbjct: 461 NLYERKELIGDAIAAYEKAIQSNPYHADAYNNIGNIYKKKKQYPAAVKMYEKA----IRC 516
Query: 191 E-ADIARPELLSLVQIH------------HAQCLLPE-SSGDNSLDKEL-EPEELEEILS 235
D L L+ + A + P+ SS NSL L E + +
Sbjct: 517 NPFDFRYHSNLGLIYLETKNYRESVDAFLKALKIAPDKSSTHNSLGNVLKEMGDFDGAEE 576
Query: 236 KLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQS 295
K ++Q D A + N+LG++ + ++ + + +DP NLGIAY
Sbjct: 577 AYKTALQLDPADANIHNSLGMLYTNMKQFDKAMREFDTAIRLDPKMASAYNNLGIAYANK 636
Query: 296 GDMEQSAK 303
GD E++A+
Sbjct: 637 GDGEKAAE 644
>gi|289192263|ref|YP_003458204.1| TPR repeat-containing protein [Methanocaldococcus sp. FS406-22]
gi|288938713|gb|ADC69468.1| TPR repeat-containing protein [Methanocaldococcus sp. FS406-22]
Length = 310
Score = 47.0 bits (110), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 57/282 (20%), Positives = 116/282 (41%), Gaps = 52/282 (18%)
Query: 166 MYQRLGQPLKAVSSYEKAEEIL---LRCEADIARPE------LLSLVQIHHAQCLLPESS 216
Y R G+ LK++ Y++A E L L+ + D +R L+SL ++ ++ + +
Sbjct: 41 FYVRKGRLLKSLGRYDEALECLDKALKLKPDYSRAYFLKGVLLMSLGRLKESKEVFLKLL 100
Query: 217 GDNSLDKE--------------LEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSG 262
LDK+ + E +E L L+ + + A+ W G IL G
Sbjct: 101 ---ELDKQESNIGAKCITATILMRLGEFDEALKILETMFEDYPKSAIAWAEKGEILYSEG 157
Query: 263 RLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINY 322
+L+ ++ L V+P + + G F+ G ++ +CF+ +I K++ AL+
Sbjct: 158 KLKEALECFEKALEVNPKDYLSLLYKGEILFELGKFREALECFEKIIQKNEKDIRALLYV 217
Query: 323 AALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYY 382
+L+ + AKE + ALK +P ++ ++
Sbjct: 218 IQILIF---------------------LGRITEAKEYIEKALKLNPNSSLLYVYYGIVLN 256
Query: 383 LTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVS-----RIKDA 419
G ++ + + +K ++ P + + AV+ +I+DA
Sbjct: 257 KLGKYKKALEWFDKVLEISPTNVYAWHGKAVALEKLGKIEDA 298
>gi|428219228|ref|YP_007103693.1| hypothetical protein Pse7367_3015 [Pseudanabaena sp. PCC 7367]
gi|427991010|gb|AFY71265.1| Tetratricopeptide TPR_1 repeat-containing protein [Pseudanabaena
sp. PCC 7367]
Length = 1089
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 81/200 (40%), Gaps = 37/200 (18%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELL---SLVQIHHAQC 210
P AH+ LG Y + G P A+S Y E + + E A L SLV+ H
Sbjct: 807 PDLVFAHWFLGQSYDQQGLPELALSQY--IEALTIEPETFTAESHFLLGNSLVERHRY-- 862
Query: 211 LLPESSGDNSLDK-----ELEPEELEEILSKLKE-SMQSDTRQAVVWNT----------- 253
D +L+ EL+P L+ +++K ++Q + AV T
Sbjct: 863 -------DQALEFYQRAIELKPGYLDAHRNRIKALALQGNLAAAVQAQTDLVAADPDLLS 915
Query: 254 ------LGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQD 307
LG+ +++ +L +I + + +DP N D NLG + Q + + C+Q+
Sbjct: 916 AKECNELGMHCIQAEKLAEAIHCFENAIQIDPENADAHFNLGNTFAQRNQVRDAIICYQE 975
Query: 308 LILKDQNHPAALINYAALLL 327
I D N N LLL
Sbjct: 976 AIAIDPNFAQIYFNLGVLLL 995
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 76/159 (47%), Gaps = 23/159 (14%)
Query: 163 LGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLD 222
LG+ +LGQ +A++SYE+A A PE LS + + L S N D
Sbjct: 97 LGVALSKLGQLDEAIASYEQALA---------ANPEDLSALYL-----LGVAYSRQNQWD 142
Query: 223 KELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNC 282
+ +++L+ +QS A + LG+ L+S L+ ++ L+ + PN+
Sbjct: 143 SAIA--SYQKVLN-----LQSAHIPARM--NLGVAFLRSSNLKQAVREFEQLVTIAPNSS 193
Query: 283 DCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALIN 321
D NLGIA+ + G++E +A + I + +H AL N
Sbjct: 194 DAHCNLGIAHHRLGELETAAASLETAIALEPSHMQALYN 232
>gi|425453430|ref|ZP_18833188.1| Similar to tr|Q4BXF8|Q4BXF8_CROWT Glycosyl transferase [Microcystis
aeruginosa PCC 9807]
gi|389804272|emb|CCI16859.1| Similar to tr|Q4BXF8|Q4BXF8_CROWT Glycosyl transferase [Microcystis
aeruginosa PCC 9807]
Length = 403
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Query: 226 EPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCI 285
E E+ E LS +++++ D A + LGL+L + RL SI L ++P+N
Sbjct: 289 EAEKYETALSVFEKTVEIDPSYADGYYNLGLVLKQLHRLPESIKAYKKALKLNPDNPTIY 348
Query: 286 GNLGIAYFQSGDMEQSAKCFQD--LILKDQ 313
NLG+AY G ++ + +Q +LKDQ
Sbjct: 349 QNLGVAYIVFGSYNEAIEIWQKGLQLLKDQ 378
>gi|410964078|ref|XP_003988583.1| PREDICTED: transmembrane and TPR repeat-containing protein 1-like
[Felis catus]
Length = 338
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 75/334 (22%), Positives = 135/334 (40%), Gaps = 46/334 (13%)
Query: 228 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 287
E+ EE ++ LK+S++ A +++L +L + R + + + + + P++ D N
Sbjct: 18 EKKEEAITLLKDSIKYGPEFADAYSSLASLLAEQERFKEAEEIYQAGIKNCPDSSDLHNN 77
Query: 288 LGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL 347
G+ +G E++ +Q I +H A++N G + G N+
Sbjct: 78 YGVFLVDTGSPEKAVAHYQQAITLSPSHHVAMVN--------LGRLYRSLGENS------ 123
Query: 348 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 407
+A+E AL+ K A I + L YY TG + + + +AA L+P+
Sbjct: 124 -------LAEEWYKRALQVSRK-AEILSPLGALYYNTGRYEEALQIYREAAALQPSQREL 175
Query: 408 RYAVA-----VSRIKDAERSQEPTEQLSWAGNEMASILREGDPVQIEPPIAWAGF-AAVQ 461
R A+A + + K+AE+ E +L Q A A+Q
Sbjct: 176 RLALAQVLAVMGQTKEAEKMTNHIVSEETGCLECYRLLSAIYSKQERHDKALDAIDKALQ 235
Query: 462 ---KTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKADPKAAH 518
K V+ F T+ N+L E LD+A E AA++ +P A
Sbjct: 236 LKPKDPKVVSELFFTKGNQLR---------EQNLLDKAF------ESYKAAVELNPDQAQ 280
Query: 519 IWANLANAYYLTGDHRSSGKCLEKVLMVYCSSNL 552
W N+ ++ G++ S+ E+ L + S L
Sbjct: 281 AWMNMGGIQHIKGNYVSARAYYERALQLVPDSKL 314
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 111/273 (40%), Gaps = 53/273 (19%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCL-- 211
P ++ H G+ G P KAV+ Y++A ++L HH +
Sbjct: 69 PDSSDLHNNYGVFLVDTGSPEKAVAHYQQA----------------ITLSPSHHVAMVNL 112
Query: 212 --LPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSIS 269
L S G+NSL +E K ++Q +R+A + + LG + +GR + ++
Sbjct: 113 GRLYRSLGENSLAEEW-----------YKRALQV-SRKAEILSPLGALYYNTGRYEEALQ 160
Query: 270 VLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAK--------------CFQDL---ILKD 312
+ A+ P+ + L G +++ K C++ L K
Sbjct: 161 IYREAAALQPSQRELRLALAQVLAVMGQTKEAEKMTNHIVSEETGCLECYRLLSAIYSKQ 220
Query: 313 QNHPAAL--INYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 370
+ H AL I+ A L K V++ G L + + ++ A E AA++ +P
Sbjct: 221 ERHDKALDAIDKALQLKPKDPKVVSELFFTKGNQ--LREQNLLDKAFESYKAAVELNPDQ 278
Query: 371 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 403
A W N+ ++ G++ S+ E+A +L P+
Sbjct: 279 AQAWMNMGGIQHIKGNYVSARAYYERALQLVPD 311
>gi|170693696|ref|ZP_02884854.1| TPR repeat-containing protein [Burkholderia graminis C4D1M]
gi|170141478|gb|EDT09648.1| TPR repeat-containing protein [Burkholderia graminis C4D1M]
Length = 615
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 86/208 (41%), Gaps = 36/208 (17%)
Query: 254 LGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQ-DLILKD 312
LG L G++ +I + L + P+ NLG AY +G E +A F+ L L+
Sbjct: 75 LGNALKALGQIDEAIDQFRNALTLAPSFPMAHYNLGNAYAATGRHEDAADAFRRSLHLQP 134
Query: 313 QN----------------HPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVA 356
+ H A+ ++ L + G AGA G L+ + A
Sbjct: 135 DDASSHNNLGNALHALGRHEEAIASFRRTLELRPGH----AGALNNMGMSLNALGRADEA 190
Query: 357 KECLLAALKADPK--AAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAV--- 411
C AAL A+P+ AAH NLAN + TG H + E A L+PN Y +
Sbjct: 191 IPCFKAALAAEPRFVAAHF--NLANTFDATGRHAQAVASFEAALALQPNLPPAIYGMGNA 248
Query: 412 --AVSRIKDA----ERSQ--EPTEQLSW 431
A+ R +A ERS +P L+W
Sbjct: 249 LAALGRHTEAIPYLERSVGLDPQFALAW 276
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 76/189 (40%), Gaps = 13/189 (6%)
Query: 231 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 290
E+ + S+ A N LG L GR + +I+ L + P + + N+G+
Sbjct: 120 EDAADAFRRSLHLQPDDASSHNNLGNALHALGRHEEAIASFRRTLELRPGHAGALNNMGM 179
Query: 291 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYA---------ALLLCKYGSVLA----GA 337
+ G +++ CF+ + + AA N A A + + + LA
Sbjct: 180 SLNALGRADEAIPCFKAALAAEPRFVAAHFNLANTFDATGRHAQAVASFEAALALQPNLP 239
Query: 338 GANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKA 397
A G G L A L ++ DP+ A W +L A+ G H ++ + ++A
Sbjct: 240 PAIYGMGNALAALGRHTEAIPYLERSVGLDPQFALAWLSLGTAHQALGAHATALRAFDQA 299
Query: 398 AKLEPNCMS 406
+L+P+ S
Sbjct: 300 LRLQPDLAS 308
>gi|116329495|ref|YP_799215.1| hypothetical protein LBL_2968 [Leptospira borgpetersenii serovar
Hardjo-bovis str. L550]
gi|116122239|gb|ABJ80282.1| TPR-repeat-containing protein [Leptospira borgpetersenii serovar
Hardjo-bovis str. L550]
Length = 1197
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 30/169 (17%), Positives = 74/169 (43%), Gaps = 23/169 (13%)
Query: 135 REEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADI 194
R+ ++ + G + K P + ++H+ +G+++ + + ++ S++++ L D
Sbjct: 688 RKGEIDKAEFGFKEILAKKPDSYYSHYQMGIIHLQRKKYEASIDSFDRS----LLLNTDF 743
Query: 195 ARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTL 254
+ + ++H SG+ L KE + + +MQ D+ + +
Sbjct: 744 VAARIGKGISMYH--------SGNKKLAKE-----------EFETAMQQDSANELAPYNI 784
Query: 255 GLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAK 303
G+IL +I++ ++ +P D + Y++ GD+EQ+ K
Sbjct: 785 GIILFNDNLYNEAIAIFKEIIQKNPEFSDAHYQISYIYYKRGDLEQAEK 833
>gi|435852070|ref|YP_007313656.1| tetratricopeptide repeat protein [Methanomethylovorans hollandica DSM
15978]
gi|433662700|gb|AGB50126.1| tetratricopeptide repeat protein [Methanomethylovorans hollandica DSM
15978]
Length = 1078
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 62/281 (22%), Positives = 115/281 (40%), Gaps = 49/281 (17%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 213
P+N+ A G Y L + A SSY++A E L R DI + Q +
Sbjct: 778 PENSQAFSDRGDAYYALEKYPDAASSYDQALE-LDRGNVDIL-----------YKQSVAY 825
Query: 214 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 273
E G D+ + ++I+++ Q D++ A+ GL L + GR +++
Sbjct: 826 EKLG--QFDRAIG--SYDKIIAE-----QPDSKDAIYHK--GLALDRMGRYDDAVACYDQ 874
Query: 274 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSV 333
LL +DP++ +G +++ GD +Q+ F ++ D +A+ + G++
Sbjct: 875 LLELDPSDTLVMGTKAFSFYLRGDYQQALAGFDQVLAIDPTSVSAMYH--------KGTI 926
Query: 334 LAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKC 393
+ G D+ L+ DP W N Y L G +S C
Sbjct: 927 SYLVSSYKGSIYYYDK-------------TLELDPTCVTAWYNKGFIYNLIGQVETSISC 973
Query: 394 LEKAAKLEPNCMST----RYAV-AVSRIKDAERSQEPTEQL 429
+ A ++P+ S R+A+ ++ + +AE +E E +
Sbjct: 974 YDSALAIDPSSRSVLYNKRFALYSIGKSSEAEICKETLESI 1014
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 33/168 (19%), Positives = 69/168 (41%), Gaps = 13/168 (7%)
Query: 255 GLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQN 314
G +L +G ++ ++++++DP N + G AY+ +A + + D+
Sbjct: 754 GRVLFSTGSYDQALQYANTVISIDPENSQAFSDRGDAYYALEKYPDAASSYDQALELDRG 813
Query: 315 HPAAL----INYAAL-----LLCKYGSVLA----GAGANTGEGACLDQASAVNVAKECLL 361
+ L + Y L + Y ++A A +G LD+ + A C
Sbjct: 814 NVDILYKQSVAYEKLGQFDRAIGSYDKIIAEQPDSKDAIYHKGLALDRMGRYDDAVACYD 873
Query: 362 AALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRY 409
L+ DP + A ++YL GD++ + ++ ++P +S Y
Sbjct: 874 QLLELDPSDTLVMGTKAFSFYLRGDYQQALAGFDQVLAIDPTSVSAMY 921
>gi|229577290|ref|NP_001153341.1| O-glycosyltransferase [Nasonia vitripennis]
Length = 1061
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 64/155 (41%), Gaps = 21/155 (13%)
Query: 251 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 310
++ LG + + G+LQ ++ + + P+ D NL A +GDMEQ+ + +
Sbjct: 106 YSNLGNVYKERGQLQEALENYRHAVRLKPDFIDGYINLAAALVAAGDMEQAVQAY----- 160
Query: 311 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 370
+ Y L C + G L + ++ AK C L A++ P
Sbjct: 161 ------VTALQYNPDLYC----------VRSDLGNLLKALARLDEAKACYLKAIETRPDF 204
Query: 371 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 405
A W+NL + G+ + EKA L+PN +
Sbjct: 205 AVAWSNLGCVFNAQGEIWLAIHHFEKAVALDPNFL 239
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 125/306 (40%), Gaps = 57/306 (18%)
Query: 248 AVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQD 307
AV W+ LG + G + +I +A+DPN D AY G++ + A+ F
Sbjct: 205 AVAWSNLGCVFNAQGEIWLAIHHFEKAVALDPNFLD-------AYINLGNVLKEARIFDR 257
Query: 308 LILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL-DQASAVNVAKECLLAALKA 366
+ AA + AL L +V+ G AC+ + +++A + A++
Sbjct: 258 AV-------AAYLR--ALNLSPNNAVV------HGNLACVYYEQGLIDLAIDTYRRAIEL 302
Query: 367 DPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVA-VSR----IKDAER 421
P + NLANA G + +C A +L P + +A + R I++A R
Sbjct: 303 QPNFPDAYCNLANALKEKGQVVEAEECYNTALRLCPTHADSLNNLANIKREQGYIEEATR 362
Query: 422 ----SQEPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFAAVQKTHHEVAAAFETEENE 477
+ E + + A + +AS+L++ + E + + +Q T A A+ N
Sbjct: 363 LYLKALEVFPEFAAAHSNLASVLQQQGKLN-EALMHYKEAIRIQPT---FADAYSNMGNT 418
Query: 478 LSKMEECAGAGESAFLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSG 537
L +M++ G A +C A++ +P A +NLA+ H+ SG
Sbjct: 419 LKEMQDVQG---------------ALQCYTRAIQINPAFADAHSNLASI------HKDSG 457
Query: 538 KCLEKV 543
E +
Sbjct: 458 NIPEAI 463
>gi|66524297|ref|XP_393964.2| PREDICTED: transmembrane and TPR repeat-containing protein
CG4050-like isoform 1 [Apis mellifera]
Length = 996
Score = 46.6 bits (109), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 90/226 (39%), Gaps = 38/226 (16%)
Query: 159 AHFLLGLMYQRLGQPLKAVSSYEKAEEILLRC------EADIARPELLSLVQIHHAQCLL 212
AH +G Y L +A +Y KA+ +L + +A IA L V +
Sbjct: 483 AHINVGRTYNHLKMFKEAEDAYLKAKSLLPKAKPGESYQARIAPNHLNVFVNL------- 535
Query: 213 PESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLS 272
N + K E ++L + SM++D QA + G +L+K R + + V
Sbjct: 536 -----ANLIAKNATRLEEADLLYRQAISMRADYTQAYI--NRGDVLIKLNRTKEAQEVYE 588
Query: 273 SLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGS 332
L D NN D NLG+ + + G Q+ + D H AL+N +A+LL + G
Sbjct: 589 RALFYDSNNPDIYYNLGVVFLEQGKASQALAYLDKALEFDPEHEQALLN-SAILLQELG- 646
Query: 333 VLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLA 378
+A VA+E LL L+ D + NL
Sbjct: 647 ----------------RAELRKVARERLLKLLRKDSNNERVHFNLG 676
>gi|380012016|ref|XP_003690086.1| PREDICTED: transmembrane and TPR repeat-containing protein
CG4050-like [Apis florea]
Length = 997
Score = 46.6 bits (109), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 90/226 (39%), Gaps = 38/226 (16%)
Query: 159 AHFLLGLMYQRLGQPLKAVSSYEKAEEILLRC------EADIARPELLSLVQIHHAQCLL 212
AH +G Y L +A +Y KA+ +L + +A IA L V +
Sbjct: 483 AHINVGRTYNHLKMFKEAEDAYLKAKSLLPKAKPGESYQARIAPNHLNVFVNL------- 535
Query: 213 PESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLS 272
N + K E ++L + SM++D QA + G +L+K R + + V
Sbjct: 536 -----ANLIAKNATRLEEADLLYRQAISMRADYTQAYI--NRGDVLIKLNRTKEAQEVYE 588
Query: 273 SLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGS 332
L D NN D NLG+ + + G Q+ + D H AL+N +A+LL + G
Sbjct: 589 RALFYDSNNPDIYYNLGVVFLEQGKASQALAYLDKALEFDPEHEQALLN-SAILLQELG- 646
Query: 333 VLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLA 378
+A VA+E LL L+ D + NL
Sbjct: 647 ----------------RAELRKVARERLLKLLRKDSNNERVHFNLG 676
>gi|307173081|gb|EFN64211.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
110 kDa subunit [Camponotus floridanus]
Length = 1092
Score = 46.6 bits (109), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 64/155 (41%), Gaps = 21/155 (13%)
Query: 251 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 310
++ LG + + G+LQ ++ + + P+ D NL A +GDMEQ+ + +
Sbjct: 131 YSNLGNVYKERGQLQEALENYRHAVRLKPDFIDGYINLAAALVAAGDMEQAVQAY----- 185
Query: 311 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 370
+ Y L C + G L + ++ AK C L A++ P
Sbjct: 186 ------VTALQYNPDLYC----------VRSDLGNLLKALARLDEAKACYLKAIETRPDF 229
Query: 371 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 405
A W+NL + G+ + EKA L+PN +
Sbjct: 230 AVAWSNLGCVFNAQGEIWLAIHHFEKAVALDPNFL 264
Score = 45.8 bits (107), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 71/314 (22%), Positives = 126/314 (40%), Gaps = 65/314 (20%)
Query: 248 AVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQD 307
AV W+ LG + G + +I +A+DPN D AY G++ + A+ F
Sbjct: 230 AVAWSNLGCVFNAQGEIWLAIHHFEKAVALDPNFLD-------AYINLGNVLKEARIFDR 282
Query: 308 LILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL-DQASAVNVAKECLLAALKA 366
+ AA + AL L +V+ G AC+ + +++A + A++
Sbjct: 283 AV-------AAYLR--ALNLSPNNAVV------HGNLACVYYEQGLIDLAIDTYRRAIEL 327
Query: 367 DPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP------NCMSTRYAVAVSRIKDAE 420
P + NLANA G + +C A +L P N + YAV+ + IK +
Sbjct: 328 QPNFPDAYCNLANALKEKGQVVEAEECYNTALRLCPTHADSLNNLVQTYAVSTANIKREQ 387
Query: 421 -----------RSQEPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFAAVQKTHHEVAA 469
++ E + + A + +AS+L++ + E + + +Q T A
Sbjct: 388 GYIEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLN-EALMHYKEAIRIQPT---FAD 443
Query: 470 AFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYL 529
A+ N L +M++ G A +C A++ +P A +NLA+
Sbjct: 444 AYSNMGNTLKEMQDIQG---------------ALQCYTRAIQINPAFADAHSNLASI--- 485
Query: 530 TGDHRSSGKCLEKV 543
H+ SG E +
Sbjct: 486 ---HKDSGNIPEAI 496
>gi|448747260|ref|ZP_21728921.1| Tetratricopeptide-like helical [Halomonas titanicae BH1]
gi|445565172|gb|ELY21284.1| Tetratricopeptide-like helical [Halomonas titanicae BH1]
Length = 437
Score = 46.6 bits (109), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 77/204 (37%), Gaps = 15/204 (7%)
Query: 213 PESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLS 272
P S N+ + LE + + L K KE W LG L + G+ ++ L
Sbjct: 6 PYRSSSNARQRNLEVKGTAQALKKAKERTVQQPANLAAWKQLGAELSEVGQFDEALIALE 65
Query: 273 SLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAA--LINYAALLLCKY 330
A+ ++ + + G Q+G+ EQ+ D I + N+ A I Y ++
Sbjct: 66 RASALVSDDAETLALKGRITHQAGNPEQALIFLHDAIKLNPNYAKAQHYIGYIYYTQARF 125
Query: 331 GSVLAGAGA------------NTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLA 378
L A NT G L QA N AK+ L A + PK W NL
Sbjct: 126 NEALQHAEIACELVPDDVDMLNT-LGNTLMQAFEYNRAKDALEKAARLAPKNYLSWNNLG 184
Query: 379 NAYYLTGDHRSSGKCLEKAAKLEP 402
N Y GD + +A ++ P
Sbjct: 185 NVYNAIGDLDKGLESYWQAHRVNP 208
>gi|417781814|ref|ZP_12429550.1| tetratricopeptide repeat protein [Leptospira weilii str.
2006001853]
gi|410778000|gb|EKR62642.1| tetratricopeptide repeat protein [Leptospira weilii str.
2006001853]
Length = 1197
Score = 46.6 bits (109), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 32/169 (18%), Positives = 78/169 (46%), Gaps = 23/169 (13%)
Query: 135 REEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADI 194
R+ ++ + G + K P + ++H+ +G+++ + + ++ S++++ +LL +
Sbjct: 688 RKGEIDKAEAGFKEILAKKPDSYYSHYQMGIIHLQRKEYEASIDSFDRS--LLLNIDFVA 745
Query: 195 ARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTL 254
AR + + ++H SG+ L KE + + +MQ D+ + +
Sbjct: 746 AR--IGKGISMYH--------SGNKKLAKE-----------EFETAMQQDSANELAPYNI 784
Query: 255 GLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAK 303
G+IL +I++ ++ +P D + Y++ GD+EQ+ K
Sbjct: 785 GIILFNDNLYNEAIAIFKEIIQKNPEFSDAHYQISYIYYKRGDLEQAEK 833
>gi|193213026|ref|YP_001998979.1| TPR repeat-containing protein [Chlorobaculum parvum NCIB 8327]
gi|193086503|gb|ACF11779.1| TPR repeat-containing protein [Chlorobaculum parvum NCIB 8327]
Length = 536
Score = 46.6 bits (109), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 36/178 (20%), Positives = 67/178 (37%), Gaps = 21/178 (11%)
Query: 231 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 290
+ +S + ++Q + WN LG + +G +I + + NN N+GI
Sbjct: 272 QNAISAFQNAVQIKPDNSKAWNDLGFAYVVAGMKLEAIEAYKKSILTNQNNAAAWQNIGI 331
Query: 291 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQA 350
Y + GD++ + + FQ + ++ +A +N G L
Sbjct: 332 LYLKKGDLDMATESFQQAVQIKPDYLSAWVNL---------------------GISLQAN 370
Query: 351 SAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTR 408
+ A + A+ + + IW NL AY G+ S A ++ PN + R
Sbjct: 371 GSPKEAIQAFTKAISINGNNSVIWNNLGLAYRDNGNVDQSIDAFRHALQINPNYDTAR 428
Score = 45.4 bits (106), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 75/170 (44%), Gaps = 23/170 (13%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 213
P N+ A LG Y G L+A+ +Y+K+ +L + + A + + ++
Sbjct: 286 PDNSKAWNDLGFAYVVAGMKLEAIEAYKKS---ILTNQNNAAAWQNIGILY--------- 333
Query: 214 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 273
L+ +L+ ++++Q W LG+ L +G + +I +
Sbjct: 334 -----------LKKGDLDMATESFQQAVQIKPDYLSAWVNLGISLQANGSPKEAIQAFTK 382
Query: 274 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYA 323
++++ NN NLG+AY +G+++QS F+ + + N+ A N A
Sbjct: 383 AISINGNNSVIWNNLGLAYRDNGNVDQSIDAFRHALQINPNYDTARNNLA 432
>gi|108757730|ref|YP_632805.1| TPR domain-containing protein [Myxococcus xanthus DK 1622]
gi|108461610|gb|ABF86795.1| TPR domain protein [Myxococcus xanthus DK 1622]
Length = 624
Score = 46.6 bits (109), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 71/156 (45%), Gaps = 20/156 (12%)
Query: 248 AVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQD 307
A +++ L L + GR + ++++L +A P + D + LG A+ + GD+ + +
Sbjct: 427 AALYDALAATLHRQGRGREALTLLRGAVARFPRDEDLLYVLGAAHERQGDVTGALARMRA 486
Query: 308 LILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKAD 367
++ +H AAL N+ G +LA AG N E A+ + AL+
Sbjct: 487 VLAVSPDHAAAL-NF-------LGYLLAQAGQNLDE------------AERRVRRALELR 526
Query: 368 PKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 403
P +L Y+ GD+ + LE+A+ L P+
Sbjct: 527 PDTGAYLDSLGWVYFRRGDYARAVDALERASTLAPD 562
>gi|440756140|ref|ZP_20935341.1| glycosyl transferase 2 family protein [Microcystis aeruginosa
TAIHU98]
gi|440173362|gb|ELP52820.1| glycosyl transferase 2 family protein [Microcystis aeruginosa
TAIHU98]
Length = 403
Score = 46.6 bits (109), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Query: 226 EPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCI 285
E E+ E LS +++++ D A + LGL+L + RL SI L ++P+N
Sbjct: 289 EAEKYEAALSVFEKTVEIDPSYADGYYNLGLVLKQLHRLPESIKAYKKALKLNPDNPTIY 348
Query: 286 GNLGIAYFQSGDMEQSAKCFQD--LILKDQ 313
NLG+AY G ++ + +Q +LKDQ
Sbjct: 349 QNLGVAYIVFGSYNEAIEIWQKGLQLLKDQ 378
>gi|418720490|ref|ZP_13279688.1| tetratricopeptide repeat protein [Leptospira borgpetersenii str. UI
09149]
gi|410743468|gb|EKQ92211.1| tetratricopeptide repeat protein [Leptospira borgpetersenii str. UI
09149]
Length = 1197
Score = 46.6 bits (109), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 30/169 (17%), Positives = 74/169 (43%), Gaps = 23/169 (13%)
Query: 135 REEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADI 194
R+ ++ ++G + K P + ++H+ +G+++ + + ++ S++++ L D
Sbjct: 688 RKGEIDKAESGFKEILAKKPDSYYSHYQMGIIHLQRKKYEASIDSFDRS----LLLNTDF 743
Query: 195 ARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTL 254
+ + ++H SG+ L KE + +MQ D+ + +
Sbjct: 744 VAARIGKGISMYH--------SGNKKLAKE-----------GFETAMQQDSANELAPYNI 784
Query: 255 GLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAK 303
G+IL +I++ ++ +P D + Y++ GD+EQ+ K
Sbjct: 785 GIILFNDNLYNEAIAIFKEIIQKNPEFSDAHYQISYIYYKRGDLEQAEK 833
>gi|359729137|ref|ZP_09267833.1| TPR repeat-containing protein [Leptospira weilii str. 2006001855]
Length = 1092
Score = 46.6 bits (109), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 32/169 (18%), Positives = 78/169 (46%), Gaps = 23/169 (13%)
Query: 135 REEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADI 194
R+ ++ + G + K P + ++H+ +G+++ + + ++ S++++ +LL +
Sbjct: 688 RKGEIDKAEAGFKEILAKKPDSYYSHYQMGIIHLQRKEYEASIDSFDRS--LLLNIDFVA 745
Query: 195 ARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTL 254
AR + + ++H SG+ L KE + + +MQ D+ + +
Sbjct: 746 AR--IGKGISMYH--------SGNKKLAKE-----------EFETAMQQDSANELAPYNI 784
Query: 255 GLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAK 303
G+IL +I++ ++ +P D + Y++ GD+EQ+ K
Sbjct: 785 GIILFNDNLYNEAIAIFKEIIQKNPEFSDAHYQISYIYYKRGDLEQAEK 833
>gi|451981544|ref|ZP_21929896.1| hypothetical protein NITGR_590036 [Nitrospina gracilis 3/211]
gi|451761217|emb|CCQ91160.1| hypothetical protein NITGR_590036 [Nitrospina gracilis 3/211]
Length = 660
Score = 46.6 bits (109), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 76/331 (22%), Positives = 132/331 (39%), Gaps = 44/331 (13%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 213
P A H LGL++ R A +++E A + L E D A L +L H + L
Sbjct: 119 PDYALPHNNLGLLHARRQDFEGARAAFETA--MRLDPEYDQAHYNLGNLY-FDHQKYALA 175
Query: 214 ESSGDNSL----DKELEPEEL----------EEILSKLKESMQSDTRQAVVWNTLGLILL 259
E + SL D EL EE + +ES+ D + +LG + +
Sbjct: 176 EKAYKESLRLNPDSAFTHHELGNLYHHLGRYEEAEQEFQESLFLDPKLEAAHVSLGNLYV 235
Query: 260 KSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAAL 319
+ RL + ++ L++D N+ D +L + +FQSG EQ+ K ++ + ++ ++ +
Sbjct: 236 DTDRLNDAEDAINKALSIDSNSVDARHSLALIHFQSGLFEQAEKEWRACLRREPDNASFY 295
Query: 320 INYAALL---------LCKYGSVLAGAGAN----TGEGACLDQASAVNVAKECLLAALKA 366
N L + Y A N G + A++ L AL+
Sbjct: 296 NNLGNSLSSMERYEEAIETYQKAFALEPDNPLPLFNLGLVYEDLDRFQEAEDNYLHALRL 355
Query: 367 DPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAV-----SRIKDAER 421
+P+ N+AN Y G + L +A +L+ + +A + AE+
Sbjct: 356 NPQHLSALVNIANLYSNLGRSEEAIPYLRQALELDSKHAKAHFGMACILEDERKFLQAEQ 415
Query: 422 ------SQEPTEQLSWAGNEMASI-LREGDP 445
QEP Q +W ++ S+ L G+P
Sbjct: 416 HLCNVLDQEPDNQFAW--RKLGSVHLESGNP 444
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 36/69 (52%)
Query: 253 TLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKD 312
LGL+L + GR + +V L V P++ NLG+A F ++++ + ++ + +D
Sbjct: 535 NLGLVLDRIGRFDEAETVYRRALEVSPDDAQIWNNLGLARFARNRLQEAEEALKEAVQRD 594
Query: 313 QNHPAALIN 321
+P A N
Sbjct: 595 PTYPLAHFN 603
Score = 42.0 bits (97), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 63/287 (21%), Positives = 105/287 (36%), Gaps = 40/287 (13%)
Query: 146 LVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQI 205
L + R+ P + H LG Y L + +A + Y +A L +AD A LL L +
Sbjct: 9 LKQIIRQNPGDPDPHCDLGDYYVELNRYEEAEAHYNQA----LGYDADCAEA-LLGLGIV 63
Query: 206 HHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQ 265
H Q PE+ + S++ DT + N LG + R +
Sbjct: 64 RHRQQRYPEAE------------------KYYRASLKLDTENSRTLNNLGSLYHDQERWE 105
Query: 266 SSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAAL 325
+ L +DP+ NLG+ + + D E + F+ + D + A N L
Sbjct: 106 EAEREYLKALEIDPDYALPHNNLGLLHARRQDFEGARAAFETAMRLDPEYDQAHYNLGNL 165
Query: 326 LLCKYGSVLA-------------GAGANTGEGACLDQASAVNVAKECLLAALKADPK--A 370
LA A + G A++ +L DPK A
Sbjct: 166 YFDHQKYALAEKAYKESLRLNPDSAFTHHELGNLYHHLGRYEEAEQEFQESLFLDPKLEA 225
Query: 371 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIK 417
AH+ +L N Y T + + KA ++ N + R+++A+ +
Sbjct: 226 AHV--SLGNLYVDTDRLNDAEDAINKALSIDSNSVDARHSLALIHFQ 270
>gi|326431610|gb|EGD77180.1| hypothetical protein PTSG_08273 [Salpingoeca sp. ATCC 50818]
Length = 693
Score = 46.6 bits (109), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 62/147 (42%), Gaps = 15/147 (10%)
Query: 163 LGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLD 222
+GL+ G+ A++ YE A I LR E D ++ +H + +S G+
Sbjct: 276 VGLVLDDFGEYDGAIAFYETALPIYLRTEGDKGE----NVAGLHGNLGIAYDSKGEYDKA 331
Query: 223 KELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAV----- 277
E + L ++ L E S A +N LG + G +I + LA+
Sbjct: 332 VEFYEKALAIMVETLGEKHPS---TADTYNNLGNTYDRKGDYDRAIELYEKALAIYVETL 388
Query: 278 ---DPNNCDCIGNLGIAYFQSGDMEQS 301
P+ D GNLGIAY GD +++
Sbjct: 389 GEKHPSTADTYGNLGIAYHSKGDYDRA 415
>gi|308198147|ref|XP_001386876.2| glucose repression mediator protein [Scheffersomyces stipitis CBS
6054]
gi|149388888|gb|EAZ62853.2| glucose repression mediator protein [Scheffersomyces stipitis CBS
6054]
Length = 815
Score = 46.6 bits (109), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 41/187 (21%), Positives = 74/187 (39%), Gaps = 40/187 (21%)
Query: 250 VWNTLGLILLKSGRLQSSISVLSSLLAVDPN---NCDCIGNLGIAYFQSGDMEQSAKCFQ 306
+W+ +G++ + G L+ + +L +DPN + LGI Y G ++ + +CFQ
Sbjct: 180 LWHGIGILYDRYGSLEYAEEAFVRVLELDPNFDKANEIYFRLGIIYKHQGKLQSALECFQ 239
Query: 307 DLILKDQNHP---------------------AALINYAALLLC--KYGSVLAGAG----- 338
IL + HP A Y +L ++ VL G
Sbjct: 240 -YILNNPPHPLTQPDVWFQIGSVLEQQKDWVGAKDAYEKVLQVNPQHAKVLQQLGCLYSQ 298
Query: 339 --------ANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSS 390
+ G GA +N+A + L+ +L+ D AH W L + + GD ++
Sbjct: 299 AESSPSTPSQNGSGAAQPFQQDLNIALKYLMQSLEIDNSDAHSWYYLGRVHMIRGDFNAA 358
Query: 391 GKCLEKA 397
+ ++A
Sbjct: 359 YEAFQQA 365
>gi|359690312|ref|ZP_09260313.1| TPR-repeat-containing protein [Leptospira licerasiae serovar
Varillal str. MMD0835]
Length = 690
Score = 46.6 bits (109), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 78/186 (41%), Gaps = 22/186 (11%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTL--GLILLKSGRLQSSISVLSSLLAVDPNNCDCIG 286
+LEE + L+ + Q+ + ++ ++ G L G + SI+ L L +PNN D +
Sbjct: 327 KLEESVKYLELANQAGSNDPELFRSIAEGFEQLNQG--EQSINALQKGLKYNPNNLDLLF 384
Query: 287 NLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGAC 346
L Y+ GD+ + + ++ ++ + P ALL G
Sbjct: 385 QLAETYYNKGDLLAAEETYRRIV---DSTPGDSFTETALLNL---------------GVV 426
Query: 347 LDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMS 406
LDQ A L L +PK A + NL Y TG+ + + KA+ L+P+ +
Sbjct: 427 LDQMERYGEAITYLNRVLDLNPKNAKAYYNLGLVYKHTGNGTQAIENFRKASYLDPDDIK 486
Query: 407 TRYAVA 412
+ A+
Sbjct: 487 PKEALG 492
Score = 42.0 bits (97), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 61/138 (44%), Gaps = 22/138 (15%)
Query: 231 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 290
EE ++ +S D+ LG++L + R +I+ L+ +L ++P N NLG+
Sbjct: 400 EETYRRIVDSTPGDSFTETALLNLGVVLDQMERYGEAITYLNRVLDLNPKNAKAYYNLGL 459
Query: 291 AYFQSGDMEQSAKCFQ-----------------DLILKDQNHPAALINYAALLLCK--YG 331
Y +G+ Q+ + F+ D L+++ + A+ Y+AL K Y
Sbjct: 460 VYKHTGNGTQAIENFRKASYLDPDDIKPKEALGDYYLENKFYREAIEEYSALFKQKEDYY 519
Query: 332 SV---LAGAGANTGEGAC 346
V LA A TGE +
Sbjct: 520 KVALKLAEAYMGTGESSS 537
>gi|307730646|ref|YP_003907870.1| hypothetical protein [Burkholderia sp. CCGE1003]
gi|307585181|gb|ADN58579.1| Tetratricopeptide TPR_1 repeat-containing protein [Burkholderia sp.
CCGE1003]
Length = 627
Score = 46.6 bits (109), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 37/174 (21%), Positives = 71/174 (40%), Gaps = 21/174 (12%)
Query: 231 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 290
EE ++ + +++ A N +G+ L GR +I + LA +P NL
Sbjct: 166 EEAIASFRRTLELRPGHAGALNNMGMSLNALGRADEAIPCFKAALAAEPRFVAAHFNLAN 225
Query: 291 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQA 350
+ +G EQ+ F+ + N P A+ G+ LA G + L+++
Sbjct: 226 TFDATGRHEQAVASFEATLALQPNLPPAIFGI--------GNALAALGRHAQAIPYLERS 277
Query: 351 SAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNC 404
+ DP+ A W +L A+ G H ++ + ++A +L+P+
Sbjct: 278 VGL-------------DPQFALAWLSLGTAHQALGAHATAVRAFDQALRLQPDL 318
Score = 45.8 bits (107), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 73/177 (41%), Gaps = 25/177 (14%)
Query: 254 LGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQ-DLILKD 312
LG L G++ +I + L + P+ NLG AY +G E +A F+ L L+
Sbjct: 87 LGNALKALGQIDEAIEQFRNALTLAPSFPMAHYNLGNAYAAAGRHEDAADAFRRSLRLQP 146
Query: 313 QN----------------HPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVA 356
++ H A+ ++ L + G AGA G L+ + A
Sbjct: 147 EDASSHNNLGNALHALGRHEEAIASFRRTLELRPGH----AGALNNMGMSLNALGRADEA 202
Query: 357 KECLLAALKADPK--AAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAV 411
C AAL A+P+ AAH NLAN + TG H + E L+PN + +
Sbjct: 203 IPCFKAALAAEPRFVAAHF--NLANTFDATGRHEQAVASFEATLALQPNLPPAIFGI 257
>gi|425452866|ref|ZP_18832681.1| Similar to tr|Q4BXF8|Q4BXF8_CROWT Glycosyl transferase [Microcystis
aeruginosa PCC 7941]
gi|389765193|emb|CCI08881.1| Similar to tr|Q4BXF8|Q4BXF8_CROWT Glycosyl transferase [Microcystis
aeruginosa PCC 7941]
Length = 403
Score = 46.6 bits (109), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Query: 226 EPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCI 285
E E+ E LS +++++ D A + LGL+L + RL SI L ++P+N
Sbjct: 289 EAEKYEAALSVFEKTVEIDPSYADGYYNLGLVLKQLHRLPESIKAYKKALKLNPDNPTIY 348
Query: 286 GNLGIAYFQSGDMEQSAKCFQD--LILKDQ 313
NLG+AY G ++ + +Q +LKDQ
Sbjct: 349 QNLGVAYIVFGSYNEAIEIWQKGLQLLKDQ 378
>gi|284106837|ref|ZP_06386280.1| TPR repeat-containing protein [Candidatus Poribacteria sp. WGA-A3]
gi|283830016|gb|EFC34292.1| TPR repeat-containing protein [Candidatus Poribacteria sp. WGA-A3]
Length = 351
Score = 46.6 bits (109), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 72/181 (39%), Gaps = 21/181 (11%)
Query: 231 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 290
++ ++ LK++++ A + LGL+ L ++ +VL + + P D NL
Sbjct: 84 DQAVTHLKKAVELHPNFARAYFDLGLVYQHQKNLDAAATVLKKAIEIYPRFADAQLNLAF 143
Query: 291 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQA 350
AY Q GD EQ+ +Q + D + AL N A L D
Sbjct: 144 AYDQLGDREQAISAYQAALKMDPSQLTALFNLATL---------------------YDMQ 182
Query: 351 SAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYA 410
+ A + L DP+ A W LA + + + + EKA + P+ + YA
Sbjct: 183 GDTDQAMKELQTLTSQDPQDAKAWLLLAQLAEKSLSEKQAIEAYEKALGISPDLLEAHYA 242
Query: 411 V 411
+
Sbjct: 243 L 243
>gi|219884155|gb|ACL52452.1| unknown [Zea mays]
gi|414886538|tpg|DAA62552.1| TPA: hypothetical protein ZEAMMB73_083629 [Zea mays]
Length = 211
Score = 46.6 bits (109), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 62/134 (46%)
Query: 185 EILLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSD 244
++L+R E D++ EL V+ A G L ++ P ++ + + + + +
Sbjct: 54 QVLVRRELDLSAKELQEQVRSGDASATEYFELGAVMLRRKFYPAAIKYLQQAIDKWDRDE 113
Query: 245 TRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKC 304
A V+N LG+ + +L +I + + P NLG AY Q D++ + K
Sbjct: 114 QDLAQVYNALGVSYKRENKLDKAIQQFQKAVELQPGYVTAWNNLGDAYEQQKDLKSALKA 173
Query: 305 FQDLILKDQNHPAA 318
F++++L D N+ A
Sbjct: 174 FEEVLLFDPNNKVA 187
>gi|158522428|ref|YP_001530298.1| hypothetical protein Dole_2417 [Desulfococcus oleovorans Hxd3]
gi|158511254|gb|ABW68221.1| Tetratricopeptide TPR_2 repeat protein [Desulfococcus oleovorans
Hxd3]
Length = 762
Score = 46.6 bits (109), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 69/172 (40%), Gaps = 21/172 (12%)
Query: 231 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 290
E L ++++ D N G IL + GR + +I L ++P D NLG+
Sbjct: 444 EAALQAFQKAIALDPNHMEAHNNSGFILRELGRPKEAIKFFRRALEINPAYADAHYNLGL 503
Query: 291 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQA 350
A+F DM Q+ F+ + + + A N +L+ EG D
Sbjct: 504 AFFDLKDMAQARTAFEQTLRVNPLYSKAHNNLGVILM--------------QEG---DHE 546
Query: 351 SAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 402
+AV + ALK DP+ A + NL Y G+ + +KA +P
Sbjct: 547 AAVAAYQR----ALKTDPRFAQAYNNLGIIAYQQGNPDQAASFFKKALTADP 594
Score = 42.7 bits (99), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 36/170 (21%), Positives = 74/170 (43%), Gaps = 23/170 (13%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 213
P + AH G + + LG+P +A+ + +A EI P + H+ L
Sbjct: 458 PNHMEAHNNSGFILRELGRPKEAIKFFRRALEI---------NP---AYADAHYNLGL-- 503
Query: 214 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 273
+ +++ + + +++++ + + N LG+IL++ G +++++
Sbjct: 504 ---------AFFDLKDMAQARTAFEQTLRVNPLYSKAHNNLGVILMQEGDHEAAVAAYQR 554
Query: 274 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYA 323
L DP NLGI +Q G+ +Q+A F+ + D + A N A
Sbjct: 555 ALKTDPRFAQAYNNLGIIAYQQGNPDQAASFFKKALTADPAYAGAANNLA 604
>gi|456888365|gb|EMF99348.1| tetratricopeptide repeat protein [Leptospira borgpetersenii str.
200701203]
Length = 689
Score = 46.6 bits (109), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 30/169 (17%), Positives = 75/169 (44%), Gaps = 23/169 (13%)
Query: 135 REEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADI 194
R+ ++ ++G + K P + ++H+ +G+++ + + ++ S++++ L D
Sbjct: 180 RKGEIDKAESGFKEILAKKPDSYYSHYQMGIIHLQRKKYEASIDSFDRS----LLLNTDF 235
Query: 195 ARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTL 254
+ + ++H SG+ L KE + + +MQ D+ + +
Sbjct: 236 VAARIGKGISMYH--------SGNKKLAKE-----------EFETAMQQDSANELAPYNI 276
Query: 255 GLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAK 303
G+IL +I++ ++ +P D + Y++ GD+EQ+ K
Sbjct: 277 GIILFNDNLYNEAIAIFKEIIQKNPEFSDAHYQISYIYYKRGDLEQAEK 325
>gi|340715916|ref|XP_003396453.1| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit-like
isoform 1 [Bombus terrestris]
Length = 1065
Score = 46.6 bits (109), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 64/155 (41%), Gaps = 21/155 (13%)
Query: 251 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 310
++ LG + + G+LQ ++ + + P+ D NL A +GDMEQ+ + +
Sbjct: 111 YSNLGNVYKERGQLQEALENYRHAVRLKPDFIDGYINLAAALVAAGDMEQAVQAY----- 165
Query: 311 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 370
+ Y L C + G L + ++ AK C L A++ P
Sbjct: 166 ------VTALQYNPDLYC----------VRSDLGNLLKALARLDEAKACYLKAIETRPDF 209
Query: 371 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 405
A W+NL + G+ + EKA L+PN +
Sbjct: 210 AVAWSNLGCVFNAQGEIWLAIHHFEKAVALDPNFL 244
Score = 39.7 bits (91), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 125/306 (40%), Gaps = 57/306 (18%)
Query: 248 AVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQD 307
AV W+ LG + G + +I +A+DPN D AY G++ + A+ F
Sbjct: 210 AVAWSNLGCVFNAQGEIWLAIHHFEKAVALDPNFLD-------AYINLGNVLKEARIFDR 262
Query: 308 LILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL-DQASAVNVAKECLLAALKA 366
+ AA + AL L +V+ G AC+ + +++A + A++
Sbjct: 263 AV-------AAYLR--ALNLSPNNAVV------HGNLACVYYEQGLIDLAIDTYRRAIEL 307
Query: 367 DPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVA-VSR----IKDAER 421
P + NLANA G + C A +L P+ + +A + R I++A R
Sbjct: 308 QPNFPDAYCNLANALKEKGQVVEAEDCYNTALRLCPSHADSLNNLANIKREQGYIEEATR 367
Query: 422 ----SQEPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFAAVQKTHHEVAAAFETEENE 477
+ E + + A + +AS+L++ + E + + +Q T A A+ N
Sbjct: 368 LYLKALEVFPEFAAAHSNLASVLQQQGKLN-EALMHYKEAIRIQPT---FADAYSNMGNT 423
Query: 478 LSKMEECAGAGESAFLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSG 537
L +M++ G A +C A++ +P A +NLA+ H+ SG
Sbjct: 424 LKEMQDIQG---------------ALQCYTRAIQINPAFADAHSNLASI------HKDSG 462
Query: 538 KCLEKV 543
E +
Sbjct: 463 NIPEAI 468
>gi|288941664|ref|YP_003443904.1| TPR repeat-containing protein [Allochromatium vinosum DSM 180]
gi|288897036|gb|ADC62872.1| Tetratricopeptide TPR_2 repeat protein [Allochromatium vinosum DSM
180]
Length = 666
Score = 46.6 bits (109), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 38/79 (48%)
Query: 248 AVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQD 307
A W LG IL + R Q ++SVL + L + P + +C+ LG A G ME++ +
Sbjct: 41 AFGWKILGAILTTTQRHQEAVSVLKTALKLSPEDAECLNTLGAALEDEGRMEEAGVLYAR 100
Query: 308 LILKDQNHPAALINYAALL 326
+ AA N A LL
Sbjct: 101 AARQAPGFVAAFYNLAKLL 119
>gi|350396796|ref|XP_003484668.1| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit-like
[Bombus impatiens]
Length = 1065
Score = 46.6 bits (109), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 64/155 (41%), Gaps = 21/155 (13%)
Query: 251 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 310
++ LG + + G+LQ ++ + + P+ D NL A +GDMEQ+ + +
Sbjct: 111 YSNLGNVYKERGQLQEALENYRHAVRLKPDFIDGYINLAAALVAAGDMEQAVQAY----- 165
Query: 311 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 370
+ Y L C + G L + ++ AK C L A++ P
Sbjct: 166 ------VTALQYNPDLYC----------VRSDLGNLLKALARLDEAKACYLKAIETRPDF 209
Query: 371 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 405
A W+NL + G+ + EKA L+PN +
Sbjct: 210 AVAWSNLGCVFNAQGEIWLAIHHFEKAVALDPNFL 244
Score = 39.7 bits (91), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 125/306 (40%), Gaps = 57/306 (18%)
Query: 248 AVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQD 307
AV W+ LG + G + +I +A+DPN D AY G++ + A+ F
Sbjct: 210 AVAWSNLGCVFNAQGEIWLAIHHFEKAVALDPNFLD-------AYINLGNVLKEARIFDR 262
Query: 308 LILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL-DQASAVNVAKECLLAALKA 366
+ AA + AL L +V+ G AC+ + +++A + A++
Sbjct: 263 AV-------AAYLR--ALNLSPNNAVV------HGNLACVYYEQGLIDLAIDTYRRAIEL 307
Query: 367 DPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVA-VSR----IKDAER 421
P + NLANA G + C A +L P+ + +A + R I++A R
Sbjct: 308 QPNFPDAYCNLANALKEKGQVVEAEDCYNTALRLCPSHADSLNNLANIKREQGYIEEATR 367
Query: 422 ----SQEPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFAAVQKTHHEVAAAFETEENE 477
+ E + + A + +AS+L++ + E + + +Q T A A+ N
Sbjct: 368 LYLKALEVFPEFAAAHSNLASVLQQQGKLN-EALMHYKEAIRIQPT---FADAYSNMGNT 423
Query: 478 LSKMEECAGAGESAFLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSG 537
L +M++ G A +C A++ +P A +NLA+ H+ SG
Sbjct: 424 LKEMQDIQG---------------ALQCYTRAIQINPAFADAHSNLASI------HKDSG 462
Query: 538 KCLEKV 543
E +
Sbjct: 463 NIPEAI 468
>gi|302340547|ref|YP_003805753.1| hypothetical protein Spirs_4077 [Spirochaeta smaragdinae DSM 11293]
gi|301637732|gb|ADK83159.1| Tetratricopeptide TPR_2 repeat protein [Spirochaeta smaragdinae DSM
11293]
Length = 820
Score = 46.6 bits (109), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 100/272 (36%), Gaps = 70/272 (25%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 213
P + A+ LG +Y+ Q +A+++YE+ + D P L + I
Sbjct: 136 PSFSFAYNNLGTIYESQDQTDRAITTYEEG------LQYDTNHPTLRYNLGISL------ 183
Query: 214 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 273
ES GD E + + K S++S N LG+ L K+G+L+ + +
Sbjct: 184 ESQGD-----------YEAAIREYKRSLKSRPGWPSGINNLGVALQKAGKLEEAERMFRD 232
Query: 274 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAAL-------- 325
L+ + P + NLG + G E++ +C++ + D + A +N ++L
Sbjct: 233 LVRIAPGSVKGNNNLGTVLAEQGKAEEAERCYRKALSLDAGYGKAALNLSSLKRETESPE 292
Query: 326 ------------------LLCKYGSVLAGAG----------------ANTGEGACL---- 347
L ++ AG + GE CL
Sbjct: 293 EALKSIQALAAEFPDDVALQLRFVQAYIDAGKVHKAGVILAPLLKNDPDNGEAHCLMGRI 352
Query: 348 -DQASAVNVAKECLLAALKADPKAAHIWANLA 378
Q +A++ ALK DP A W +LA
Sbjct: 353 RRQQGKKELAEQHFKLALKKDPPAIEAWLHLA 384
>gi|383863362|ref|XP_003707150.1| PREDICTED: transmembrane and TPR repeat-containing protein
CG4050-like [Megachile rotundata]
Length = 1007
Score = 46.6 bits (109), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 90/226 (39%), Gaps = 38/226 (16%)
Query: 159 AHFLLGLMYQRLGQPLKAVSSYEKAEEILLR------CEADIARPELLSLVQIHHAQCLL 212
AH +G Y L +A +Y KA+ +L + +A IA L V +
Sbjct: 483 AHINVGRTYNHLKMFKEAEDAYLKAKSLLPKPKPGESYQARIAPNHLNVFVNL------- 535
Query: 213 PESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLS 272
N + K E ++L + SM++D QA + G +L+K R + + V
Sbjct: 536 -----ANLIAKNATRLEEADLLYRQAISMRADYTQAYI--NRGDVLIKLNRTKEAQEVYE 588
Query: 273 SLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGS 332
L D NN D NLG+ + + G Q+ + D H AL+N +A+LL + G
Sbjct: 589 RALFYDSNNPDIYYNLGVVFLEQGKASQALAYLDKALEFDPEHEQALLN-SAILLQELG- 646
Query: 333 VLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLA 378
+A VA+E LL L+ D + NL
Sbjct: 647 ----------------RAELRKVARERLLKLLRKDSNNERVHFNLG 676
>gi|322787461|gb|EFZ13549.1| hypothetical protein SINV_08719 [Solenopsis invicta]
Length = 847
Score = 46.6 bits (109), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 90/226 (39%), Gaps = 38/226 (16%)
Query: 159 AHFLLGLMYQRLGQPLKAVSSYEKAEEILLRC------EADIARPELLSLVQIHHAQCLL 212
AH +G Y L +A +Y KA+ +L + +A IA L V +
Sbjct: 346 AHINVGRTYNHLKMFKEAEDAYLKAKSLLPKAKPGESYQARIAPNHLNVFVNLA------ 399
Query: 213 PESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLS 272
N + K E ++L + SM++D QA + G +L+K R + + V
Sbjct: 400 ------NLIAKNATRLEEADLLYRQAISMRADYTQAYI--NRGDVLIKLNRTKEAQEVYE 451
Query: 273 SLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGS 332
L D NN D NLG+ + + G Q+ + D H AL+N +A+LL + G
Sbjct: 452 RALFYDSNNPDIYYNLGVVFLEQGKASQALAYLDKALEFDPEHEQALLN-SAILLQELG- 509
Query: 333 VLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLA 378
+A VA+E LL L+ D + NL
Sbjct: 510 ----------------RAELRKVARERLLKLLRKDSNNERVHFNLG 539
>gi|254166562|ref|ZP_04873416.1| Tetratricopeptide repeat family [Aciduliprofundum boonei T469]
gi|289596148|ref|YP_003482844.1| TPR repeat-containing protein [Aciduliprofundum boonei T469]
gi|197624172|gb|EDY36733.1| Tetratricopeptide repeat family [Aciduliprofundum boonei T469]
gi|289533935|gb|ADD08282.1| TPR repeat-containing protein [Aciduliprofundum boonei T469]
Length = 1297
Score = 46.6 bits (109), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%)
Query: 251 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 310
W LG R++ +I+ L + +DPN+ NLGI Y + G+ E++ KCF++ I
Sbjct: 214 WVYLGAAYANIDRMREAINALKKAIKIDPNDKKSWINLGILYKKRGEYEEALKCFKEAIK 273
Query: 311 KDQN 314
D N
Sbjct: 274 IDPN 277
Score = 43.9 bits (102), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 69/173 (39%), Gaps = 40/173 (23%)
Query: 257 ILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSA-------------- 302
I+ K G+ + IS+ +L ++PN+ + + AY + G +E +
Sbjct: 390 IMKKKGQWERVISICEDILKIEPNDIGSLVDEAKAYREVGKLESALNFAIRATEIEPSNI 449
Query: 303 ---KCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEG---ACLDQASAVNV- 355
K +D I KD N P +IN AG + EG LD A A +
Sbjct: 450 ELWKLRKD-IAKDLNKPQEIIN-------------AGTQIISMEGDFETYLDLARAYYIV 495
Query: 356 -----AKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 403
AK+ L LK + + W L YY GD ++ EKA+ + PN
Sbjct: 496 SRYDDAKKTLERGLKLNEDSDEGWNLLGMIYYKLGDLENARYSFEKASTINPN 548
>gi|449465368|ref|XP_004150400.1| PREDICTED: uncharacterized protein LOC101215394 [Cucumis sativus]
gi|449496895|ref|XP_004160255.1| PREDICTED: uncharacterized LOC101215394 [Cucumis sativus]
Length = 313
Score = 46.6 bits (109), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 66/142 (46%)
Query: 177 VSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSK 236
V ++ ++L+R E D++ EL V+ A + G L ++ P + +L
Sbjct: 148 VGTFFVIRQVLVRRELDLSAKELQEQVRSGDASAMEYFELGAVMLRRKFYPAATKFLLQA 207
Query: 237 LKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSG 296
+ + D A V+N LG+ ++ +L I+ + + + P NLG AY +
Sbjct: 208 IDKWDGDDQDLAQVYNALGVSYVRDDKLDKGIAQFETAVKLQPGYVTAWNNLGDAYEKKK 267
Query: 297 DMEQSAKCFQDLILKDQNHPAA 318
+ + + K F++++L D N+ A
Sbjct: 268 EYKSALKAFEEVLLFDPNNKLA 289
>gi|350424769|ref|XP_003493906.1| PREDICTED: transmembrane and TPR repeat-containing protein
CG4050-like [Bombus impatiens]
Length = 1007
Score = 46.6 bits (109), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 90/226 (39%), Gaps = 38/226 (16%)
Query: 159 AHFLLGLMYQRLGQPLKAVSSYEKAEEILLR------CEADIARPELLSLVQIHHAQCLL 212
AH +G Y L +A +Y KA+ +L + +A IA L V +
Sbjct: 483 AHINVGRTYNHLKMFKEAEDAYLKAKSLLPKPKPGESYQARIAPNHLNVFVNL------- 535
Query: 213 PESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLS 272
N + K E ++L + SM++D QA + G IL+K R + + V
Sbjct: 536 -----ANLIAKNATRLEEADLLYRQAISMRADYTQAYI--NRGDILIKLNRTKEAQEVYE 588
Query: 273 SLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGS 332
L D NN D NLG+ + + G Q+ + D H AL+N +A+LL + G
Sbjct: 589 RALFYDSNNPDIYYNLGVVFLEQGKASQALAYLDKALEFDPEHEQALLN-SAILLQELG- 646
Query: 333 VLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLA 378
+A VA+E LL L+ D + NL
Sbjct: 647 ----------------RAELRKVARERLLKLLRKDSNNERVHFNLG 676
>gi|254168890|ref|ZP_04875730.1| Tetratricopeptide repeat family [Aciduliprofundum boonei T469]
gi|197622154|gb|EDY34729.1| Tetratricopeptide repeat family [Aciduliprofundum boonei T469]
Length = 1297
Score = 46.6 bits (109), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%)
Query: 251 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 310
W LG R++ +I+ L + +DPN+ NLGI Y + G+ E++ KCF++ I
Sbjct: 214 WVYLGAAYANIDRMREAINALKKAIKIDPNDKKSWINLGILYKKRGEYEEALKCFKEAIK 273
Query: 311 KDQN 314
D N
Sbjct: 274 IDPN 277
Score = 43.1 bits (100), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 68/173 (39%), Gaps = 40/173 (23%)
Query: 257 ILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSA-------------- 302
I+ K G+ + IS+ +L ++PN+ + + AY + G +E +
Sbjct: 390 IMKKKGQWERVISICEDILKIEPNDIGSLVDEAKAYREVGKLESALNFAIRATEIEPSNI 449
Query: 303 ---KCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEG---ACLDQASAVNV- 355
K +D I KD N P +IN AG + EG LD A A +
Sbjct: 450 ELWKLRKD-IAKDLNKPQEIIN-------------AGTQIISMEGDFETYLDLARAYYIV 495
Query: 356 -----AKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 403
AK+ L LK + W L YY GD ++ EKA+ + PN
Sbjct: 496 SRYDDAKKTLERGLKLKEDSDEGWNLLGMIYYKLGDLENARYSFEKASTINPN 548
>gi|253996225|ref|YP_003048289.1| hypothetical protein Mmol_0852 [Methylotenera mobilis JLW8]
gi|253982904|gb|ACT47762.1| Tetratricopeptide TPR_2 repeat protein [Methylotenera mobilis JLW8]
Length = 701
Score = 46.6 bits (109), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 70/170 (41%), Gaps = 20/170 (11%)
Query: 254 LGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQ 313
LGL+ ++ R ++ L LA++P D + + G+A +G+++ S K FQ IL
Sbjct: 42 LGLVYYQTNRNALAVKHLEQALAINPKQVDYLNHYGLALRAAGNIDASIKSFQQAILLQP 101
Query: 314 NHPAALINYAALLLC---------KYGSVLAGAGANTGEGACL--------DQASAV--- 353
+N LL Y VL A L +QA +
Sbjct: 102 KDLDLQLNLGNTLLAANRFEEAASYYHRVLKVKPREDEVRAALCHCLSSLGNQAHTIGNF 161
Query: 354 NVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 403
A+ C AL+ P+ A + NL NA G + K +KA +L+PN
Sbjct: 162 TQAEACFQEALQLGPQDARLLYNLGNAQRELGKPNDAAKQYQKALQLDPN 211
>gi|254412549|ref|ZP_05026323.1| tetratricopeptide repeat domain protein [Coleofasciculus
chthonoplastes PCC 7420]
gi|196180859|gb|EDX75849.1| tetratricopeptide repeat domain protein [Coleofasciculus
chthonoplastes PCC 7420]
Length = 884
Score = 46.6 bits (109), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 77/345 (22%), Positives = 130/345 (37%), Gaps = 30/345 (8%)
Query: 94 GKKINKLGKCRSRISSKMDSALEFGVDADGDQSGLGTSSSSR---EEKVSSLKTGLVHVA 150
G + KLG+ I+S D AL+F D G++ EE ++S L
Sbjct: 431 GIALRKLGRLEEAIAS-FDKALQFKPDKHEAWYNRGSALDELGRIEEAIASFDKALQF-- 487
Query: 151 RKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKA---EEILLRCEADIARPELLSLVQIHH 207
P A + G+ +LG+ +A++SY++A I LR + E ++
Sbjct: 488 --KPDYHQAWYNRGIALDKLGRIEEAIASYDQAWYNRGIALRKLGQL--EEAITCFDKAL 543
Query: 208 AQCLLPESSGDNSLDKELEPEELEEILSKLKESMQ--SDTRQAVVWNTLGLILLKSGRLQ 265
L + N + + LEE ++ +++Q D QA WN G+ L K G+L+
Sbjct: 544 QFKLDDHQAWYNRGNALFDLGRLEEGIASFDKALQFKRDCHQA--WNNRGIALKKLGQLE 601
Query: 266 SSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAAL 325
+I+ L P+ N G A F G +E++ + + + P A +
Sbjct: 602 EAIASYDKALQFKPDLHQAWNNRGNALFNLGQLEEAIASYDKALQFKPDDPEAWYSRGIA 661
Query: 326 L---------LCKYGSVLA----GAGANTGEGACLDQASAVNVAKECLLAALKADPKAAH 372
L + Y L A G L + A AL+
Sbjct: 662 LGNLGQLEEAIASYDKALQFKPDDPEAWYSRGIALGNLGQLEEAIASYDNALQFKSDDPE 721
Query: 373 IWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIK 417
W N NA G + + +KA +++P+ RY ++R K
Sbjct: 722 AWYNRGNALDGLGQLKEAIASYDKALQIKPDYHQARYNRGIARRK 766
Score = 45.4 bits (106), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 70/320 (21%), Positives = 122/320 (38%), Gaps = 40/320 (12%)
Query: 94 GKKINKLGKCRSRISSKMDSALEFGVDADGDQSGLGTSSSSREEKVSSLKTGLVHVARKM 153
G +++LG+ I+S + AL+F D G S S K+ L + + +
Sbjct: 295 GYAMDELGEIEEAIAS-FEQALQFKRDCHQAWKNRGNSQS----KLGRLFKAIASYDKAL 349
Query: 154 ---PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQC 210
P A + G+ ++LG+ +A++SY+ A + +PE +
Sbjct: 350 QFKPDYHQAWYNRGIALRKLGRLEEAIASYDNALQF---------KPE--------QHEV 392
Query: 211 LLPESSGDNSLDKELEPEELEEILSKLKESMQ--SDTRQAVVWNTLGLILLKSGRLQSSI 268
L S L + LEE ++ +++Q D QA G+ L K GRL+ +I
Sbjct: 393 WLDRSIALRKLGR------LEEAIASYDKALQFEPDDHQACY--NRGIALRKLGRLEEAI 444
Query: 269 SVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLC 328
+ L P+ + N G A + G +E++ F + ++ A N + L
Sbjct: 445 ASFDKALQFKPDKHEAWYNRGSALDELGRIEEAIASFDKALQFKPDYHQAWYN-RGIALD 503
Query: 329 KYGSVLAGAG----ANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLT 384
K G + A G L + + A C AL+ W N NA +
Sbjct: 504 KLGRIEEAIASYDQAWYNRGIALRKLGQLEEAITCFDKALQFKLDDHQAWYNRGNALFDL 563
Query: 385 GDHRSSGKCLEKAAKLEPNC 404
G +KA + + +C
Sbjct: 564 GRLEEGIASFDKALQFKRDC 583
>gi|340715918|ref|XP_003396454.1| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit-like
isoform 2 [Bombus terrestris]
Length = 1095
Score = 46.6 bits (109), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 64/155 (41%), Gaps = 21/155 (13%)
Query: 251 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 310
++ LG + + G+LQ ++ + + P+ D NL A +GDMEQ+ + +
Sbjct: 141 YSNLGNVYKERGQLQEALENYRHAVRLKPDFIDGYINLAAALVAAGDMEQAVQAY----- 195
Query: 311 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 370
+ Y L C + G L + ++ AK C L A++ P
Sbjct: 196 ------VTALQYNPDLYC----------VRSDLGNLLKALARLDEAKACYLKAIETRPDF 239
Query: 371 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 405
A W+NL + G+ + EKA L+PN +
Sbjct: 240 AVAWSNLGCVFNAQGEIWLAIHHFEKAVALDPNFL 274
Score = 39.7 bits (91), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 125/306 (40%), Gaps = 57/306 (18%)
Query: 248 AVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQD 307
AV W+ LG + G + +I +A+DPN D AY G++ + A+ F
Sbjct: 240 AVAWSNLGCVFNAQGEIWLAIHHFEKAVALDPNFLD-------AYINLGNVLKEARIFDR 292
Query: 308 LILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL-DQASAVNVAKECLLAALKA 366
+ AA + AL L +V+ G AC+ + +++A + A++
Sbjct: 293 AV-------AAYLR--ALNLSPNNAVV------HGNLACVYYEQGLIDLAIDTYRRAIEL 337
Query: 367 DPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVA-VSR----IKDAER 421
P + NLANA G + C A +L P+ + +A + R I++A R
Sbjct: 338 QPNFPDAYCNLANALKEKGQVVEAEDCYNTALRLCPSHADSLNNLANIKREQGYIEEATR 397
Query: 422 ----SQEPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFAAVQKTHHEVAAAFETEENE 477
+ E + + A + +AS+L++ + E + + +Q T A A+ N
Sbjct: 398 LYLKALEVFPEFAAAHSNLASVLQQQGKLN-EALMHYKEAIRIQPT---FADAYSNMGNT 453
Query: 478 LSKMEECAGAGESAFLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSG 537
L +M++ G A +C A++ +P A +NLA+ H+ SG
Sbjct: 454 LKEMQDIQG---------------ALQCYTRAIQINPAFADAHSNLASI------HKDSG 492
Query: 538 KCLEKV 543
E +
Sbjct: 493 NIPEAI 498
>gi|302878313|ref|YP_003846877.1| hypothetical protein Galf_1083 [Gallionella capsiferriformans ES-2]
gi|302581102|gb|ADL55113.1| Tetratricopeptide TPR_1 repeat-containing protein [Gallionella
capsiferriformans ES-2]
Length = 750
Score = 46.6 bits (109), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 80/182 (43%), Gaps = 40/182 (21%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 213
P + AH+ LGL+ Q LGQ +A +SY +A L+ D A+
Sbjct: 195 PDDFEAHYNLGLILQALGQLDEAAASYRRA----LQLNPDYAQ----------------- 233
Query: 214 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVV-------WNTLGLILLKSGRLQS 266
G N+L L+ L K +E+ S R ++ ++ LG++L R
Sbjct: 234 ---GYNNLGVTLQE------LGKFEEAEASYRRAVLIKPDYLNAYHNLGIVLQCLSRFDE 284
Query: 267 SISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL 326
+ ++ +L ++P+ + NLGI G +++ KCF+ + Q P ++ ++ L+
Sbjct: 285 AEAIHRKILQLNPDYPEAHCNLGIVLLSLGKNDEAVKCFRRAL---QLKPDFVVAHSNLI 341
Query: 327 LC 328
C
Sbjct: 342 FC 343
>gi|428297452|ref|YP_007135758.1| hypothetical protein Cal6303_0715 [Calothrix sp. PCC 6303]
gi|428233996|gb|AFY99785.1| Tetratricopeptide TPR_1 repeat-containing protein [Calothrix sp.
PCC 6303]
Length = 222
Score = 46.6 bits (109), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 75/186 (40%), Gaps = 14/186 (7%)
Query: 232 EILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIA 291
++++ E +Q + + + W G +L G Q +++ L V+P+ D +LG
Sbjct: 10 DVMTSDGEVLQVEVEEYLAWFNRGNLLDDLGLYQEAVAAYQQSLKVNPDYEDAWNSLGAV 69
Query: 292 YFQSGDM-EQSAKCFQDLILKDQNHPAALINYAALL--LCKYGSVLAGAG---------- 338
+ +M E++ KCF + D A N +L L +Y +A
Sbjct: 70 FCDQLEMYEEALKCFDQALRIDYLDNFAWYNRGNVLEHLGRYEDAIASYNLALKINSEDE 129
Query: 339 -ANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKA 397
A G L + A ALK P+ W N A Y + G+ + + + L KA
Sbjct: 130 MAWYSRGWALYEMGEFESAIASFNQALKIKPQDDSSWYNKACCYAVLGNVKKAVESLRKA 189
Query: 398 AKLEPN 403
KL PN
Sbjct: 190 IKLSPN 195
>gi|86608982|ref|YP_477744.1| TPR repeat-containing protein kinase [Synechococcus sp.
JA-2-3B'a(2-13)]
gi|86557524|gb|ABD02481.1| tetratricopeptide repeat/protein kinase domain protein
[Synechococcus sp. JA-2-3B'a(2-13)]
Length = 1270
Score = 46.6 bits (109), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 83/188 (44%), Gaps = 13/188 (6%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEI-LLRCEADI----ARPELLS------L 202
P++ A+F G + LG L A+ Y +A + + EADI AR ++ + L
Sbjct: 754 PQSGLAYFHRGQVRAALGDGLGAIQDYHQALALGVAVAEADIRRDLARAQIQTGDLQAAL 813
Query: 203 VQIHHAQCLLPESSGDNSLDKEL--EPEELEEILSKLKESMQSDTRQAVVWNTLGLILLK 260
Q++ A L PE EL + E ++ E ++ D + W G+ +
Sbjct: 814 EQLNEAVRLQPERRDLRQERAELCRQLGRWPEAIADYDEVLRQDPQDWTAWLGRGMAHGQ 873
Query: 261 SGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALI 320
G S+I LS +L DP++ + + + G A Q G E + + L+ +D H A +
Sbjct: 874 VGNWDSAIQDLSRVLQQDPDHREALWHRGQALQQLGQTEAALQDLNRLLQRDPQHRMARL 933
Query: 321 NYAALLLC 328
+LLL
Sbjct: 934 ARGSLLLT 941
>gi|425434973|ref|ZP_18815436.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9432]
gi|389675386|emb|CCH95506.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9432]
Length = 403
Score = 46.6 bits (109), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Query: 226 EPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCI 285
E E+ E LS +++++ D A + LGL+L + RL SI L ++P+N
Sbjct: 289 EAEKYEAALSVFEKTVEIDPSYADGYYNLGLVLKQLHRLPESIKAYKKALKLNPDNPTIY 348
Query: 286 GNLGIAYFQSGDMEQSAKCFQD--LILKDQ 313
NLG+AY G ++ + +Q +LKDQ
Sbjct: 349 QNLGVAYIVFGSYNEAIEIWQKGLQLLKDQ 378
>gi|197120109|ref|YP_002140536.1| hypothetical protein [Geobacter bemidjiensis Bem]
gi|197089469|gb|ACH40740.1| TPR domain protein [Geobacter bemidjiensis Bem]
Length = 1450
Score = 46.6 bits (109), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 48/99 (48%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
EL+E ++ +E++ D WN +G+ L G L+ ++ LA+ P+ + NL
Sbjct: 1045 ELDEAMASFRENLSRDPGYLPSWNAMGISLQVLGLLEEAVDCYQKALALKPDYLHALNNL 1104
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLL 327
G A G + Q+ C++ ++ D + A N A + L
Sbjct: 1105 GTASRSLGLLAQAKSCYEKVLELDPEYADARWNLALVQL 1143
Score = 40.0 bits (92), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 39/186 (20%), Positives = 72/186 (38%), Gaps = 27/186 (14%)
Query: 251 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 310
W+ L L L G + ++ L + V P+ + LG + + G+++++ F++ +
Sbjct: 999 WHNLALALKAQGAVDEALHALRRAVRVAPDYLEARHTLGQLHHERGELDEAMASFRENLS 1058
Query: 311 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 370
+D P L ++ A+ G L + A +C AL P
Sbjct: 1059 RD---PGYLPSWNAM------------------GISLQVLGLLEEAVDCYQKALALKPDY 1097
Query: 371 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQEPTEQLS 430
H NL A G + C EK +L+P R+ +A+ +++ E +
Sbjct: 1098 LHALNNLGTASRSLGLLAQAKSCYEKVLELDPEYADARWNLALVQLQLGEYRE------G 1151
Query: 431 WAGNEM 436
W G E
Sbjct: 1152 WQGYEW 1157
>gi|428313243|ref|YP_007124220.1| hypothetical protein Mic7113_5158 [Microcoleus sp. PCC 7113]
gi|428254855|gb|AFZ20814.1| tetratricopeptide repeat protein [Microcoleus sp. PCC 7113]
Length = 484
Score = 46.6 bits (109), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 81/234 (34%), Gaps = 47/234 (20%)
Query: 237 LKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSG 296
L+ ++Q D + LG L + G+ + LA+DPN + NLG+ ++ G
Sbjct: 64 LRRALQFDPFIPMAHYLLGNSLFQQGKTDLATDQYRRALALDPNMAEAYYNLGLTMYRQG 123
Query: 297 DMEQSAKCFQDLILKDQNHPAALINYAALL---------LCKYGSVLA------GAGANT 341
++ ++ +Q + N P A N A L L +Y +A GA N
Sbjct: 124 NVSEAISQYQKALSLKPNLPEARYNMALALESQGRTQEALAEYNQAIALNPDNVGAPYNM 183
Query: 342 G-----------EGACLDQASAVNV---------------------AKECLLAALKADPK 369
G A QA +N A+E L K DPK
Sbjct: 184 GLLYVRQNQIEPAIAAFQQAVKLNPDLIEGHYQLGILQARQGRWKEAEESLRTVSKLDPK 243
Query: 370 AAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQ 423
L GD +G A LEPN + + +R+K + Q
Sbjct: 244 FVQAQYQLGMVLSERGDFEGAGDRFAWVANLEPNNVDVHRRLGAARLKTRQYDQ 297
>gi|47222450|emb|CAG12970.1| unnamed protein product [Tetraodon nigroviridis]
Length = 788
Score = 46.6 bits (109), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 48/105 (45%), Gaps = 1/105 (0%)
Query: 234 LSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYF 293
+ ++S++ Q + GL G L+ +I L + + D +LG AY
Sbjct: 179 MEDFQQSLELKKNQPIAMLYKGLTFFHRGLLKEAIETFKEALKLKSDFIDAYKSLGQAYR 238
Query: 294 QSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAG 338
+ GD E + + FQ +L DQNH +L ++L +GS+ G
Sbjct: 239 ELGDFESAMESFQRALLLDQNHIQSL-QLRGMMLYHHGSLQEAIG 282
>gi|374999498|ref|YP_004975586.1| hypothetical protein AZOLI_p60001 [Azospirillum lipoferum 4B]
gi|357428469|emb|CBS91426.1| protein of unknown function [Azospirillum lipoferum 4B]
Length = 639
Score = 46.6 bits (109), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 79/184 (42%), Gaps = 18/184 (9%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILL----------RCEADIARPELLSLV 203
P+NAHA LLGL +RLG+P KA+ A +IL A++ R + V
Sbjct: 35 PRNAHAMHLLGLAERRLGRPDKALEMIRSALDILPGMADACYNLGSVLAELGRID--EAV 92
Query: 204 QIHH-AQCLLPE-SSGDNSLDKEL----EPEELEEILSKLKESMQSDTRQAVVWNTLGLI 257
H A L PE N+L L P + + + ++ + + ++ LG+
Sbjct: 93 AAHRRALVLAPELEDAYNALAALLCDRGGPRDWGMAILTFRRVLRLNPHRVAAYHDLGIA 152
Query: 258 LLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPA 317
L ++G L+ + + L++ P+ NLG + GD + + CF +L +
Sbjct: 153 LRQTGALEEAQTSQRLALSLQPDFGGAYANLGNIRIEMGDPDGAMACFHRSLLLEPEQGG 212
Query: 318 ALIN 321
L N
Sbjct: 213 VLYN 216
>gi|386021254|ref|YP_005939278.1| cytochrome c-type biogenesis protein [Pseudomonas stutzeri DSM
4166]
gi|327481226|gb|AEA84536.1| cytochrome c-type biogenesis protein [Pseudomonas stutzeri DSM
4166]
Length = 406
Score = 46.6 bits (109), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 81/197 (41%), Gaps = 23/197 (11%)
Query: 88 DVAEVEGKKINKLGKCRSRISSKMDSALEFGVD---ADGDQSGLGTSSSSREEKVSSLKT 144
D + KI KLG+ I++ + + +G+ D+ + S + V +
Sbjct: 78 DTENSDSPKIAKLGRSVPLIAAVLVPLVGYGLYMHWGASDKVQMARQFSEQPRTVEEMTA 137
Query: 145 GLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQ 204
L ++ P +A A + LG Y +P A ++ + E+ R +PELL Q
Sbjct: 138 HLEQAVKEQPDSAEAWYFLGRTYMNQERPSDAAKAFARVVELAGR------QPELLG--Q 189
Query: 205 IHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRL 264
AQ +GD ++L+ + E++Q+D ++ LG+ + GR
Sbjct: 190 WAQAQYF----AGDRQWSEQLQ--------ALTDEALQADPQELTSLGLLGIAAYEEGRY 237
Query: 265 QSSISVLSSLLAVDPNN 281
Q ++ L+A P N
Sbjct: 238 QDAVRFWEQLVAALPEN 254
>gi|443324900|ref|ZP_21053622.1| tetratricopeptide repeat protein,sulfotransferase family protein
[Xenococcus sp. PCC 7305]
gi|442795502|gb|ELS04867.1| tetratricopeptide repeat protein,sulfotransferase family protein
[Xenococcus sp. PCC 7305]
Length = 789
Score = 46.6 bits (109), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 73/166 (43%), Gaps = 15/166 (9%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
+L+E +S K+ ++ + R ++ +G +L + +L+ +I + ++PN C L
Sbjct: 25 KLDEAISTYKQGIKVEARSHECYHFIGEVLAQKDQLEQAIKSYEKSIKINPNYCWSYHCL 84
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVL---------AGAGA 339
G+ YF G +++ A + L L+ + A + L L + G++ G
Sbjct: 85 GLVYFWQGQLDK-AIAYSRLSLEKAPNIAVFYYHLGLYLKRQGNLYEAIYCCQKAIGLDP 143
Query: 340 NTGE-----GACLDQASAVNVAKECLLAALKADPKAAHIWANLANA 380
N + G CL + + E + ALK D ++ NLA+
Sbjct: 144 NLAQAHHILGQCLAKKKQWKQSYEAYIKALKLDSNLPNLRRNLADV 189
>gi|354475677|ref|XP_003500054.1| PREDICTED: tetratricopeptide repeat protein 37-like [Cricetulus
griseus]
gi|344242299|gb|EGV98402.1| Tetratricopeptide repeat protein 37 [Cricetulus griseus]
Length = 1563
Score = 46.6 bits (109), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 46/92 (50%), Gaps = 2/92 (2%)
Query: 216 SGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTL--GLILLKSGRLQSSISVLSS 273
SG ++D +E E+ E L+ L Q + A W L GL LK+G+ +++ L +
Sbjct: 530 SGAAAVDLSVELEDTETALAILTAVTQKASAGAAKWAWLRRGLYHLKAGQHSQAVADLQA 589
Query: 274 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCF 305
L DP +C+C +LG AY G + K F
Sbjct: 590 ALRADPKDCNCWESLGEAYLSRGGYTTALKSF 621
Score = 40.0 bits (92), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 32/53 (60%)
Query: 360 LLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVA 412
L AAL+ADPK + W +L AY G + ++ K +A++L P+ M + + VA
Sbjct: 587 LQAALRADPKDCNCWESLGEAYLSRGGYTTALKSFIRASELNPDSMYSVFKVA 639
>gi|340725051|ref|XP_003400888.1| PREDICTED: transmembrane and TPR repeat-containing protein
CG4050-like [Bombus terrestris]
Length = 1007
Score = 46.6 bits (109), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 90/226 (39%), Gaps = 38/226 (16%)
Query: 159 AHFLLGLMYQRLGQPLKAVSSYEKAEEILLR------CEADIARPELLSLVQIHHAQCLL 212
AH +G Y L +A +Y KA+ +L + +A IA L V +
Sbjct: 483 AHINVGRTYNHLKMFKEAEDAYLKAKSLLPKPKPGESYQARIAPNHLNVFVNL------- 535
Query: 213 PESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLS 272
N + K E ++L + SM++D QA + G IL+K R + + V
Sbjct: 536 -----ANLIAKNATRLEEADLLYRQAISMRADYTQAYI--NRGDILIKLNRTKEAQEVYE 588
Query: 273 SLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGS 332
L D NN D NLG+ + + G Q+ + D H AL+N +A+LL + G
Sbjct: 589 RALFYDSNNPDIYYNLGVVFLEQGKASQALAYLDKALEFDPEHEQALLN-SAILLQELG- 646
Query: 333 VLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLA 378
+A VA+E LL L+ D + NL
Sbjct: 647 ----------------RAELRKVARERLLKLLRKDSNNERVHFNLG 676
>gi|338536124|ref|YP_004669458.1| hypothetical protein LILAB_32495 [Myxococcus fulvus HW-1]
gi|337262220|gb|AEI68380.1| TPR repeat-containing protein [Myxococcus fulvus HW-1]
Length = 271
Score = 46.6 bits (109), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 75/165 (45%), Gaps = 14/165 (8%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 213
P +AHAH L +Y +A+S Y A + L E+ A L + H + +
Sbjct: 42 PSSAHAHDNLATVYAEKKLFREALSEYLTA--LKLEPESATAHYNLACFLSTHAGEMAVE 99
Query: 214 ESSGDNSLDKELEPEEL------------EEILSKLKESMQSDTRQAVVWNTLGLILLKS 261
E LD E L EE + +L+ +++ D++ A + L +++
Sbjct: 100 EYKEAIELDPEYPDAHLNLGLTYADQGRVEEAMRELQTAIELDSQDAFPRHELAALMMDE 159
Query: 262 GRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQ 306
G +S+I+ L ++ ++P+N + +LGI Y Q G ++ + ++
Sbjct: 160 GDYRSAITQLKEVVRLEPDNFEAQLDLGICYAQKGFYAEAERAYE 204
>gi|254784361|ref|YP_003071789.1| hypothetical protein TERTU_0098 [Teredinibacter turnerae T7901]
gi|237687029|gb|ACR14293.1| tetratricopeptide repeat domain protein [Teredinibacter turnerae
T7901]
Length = 733
Score = 46.6 bits (109), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 40/70 (57%)
Query: 237 LKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSG 296
L++ +Q + V + L I L +G L+ +I+ +L + P N + NLGI+Y+ G
Sbjct: 487 LEDCIQRHPKDFVNYKDLARIYLDNGNLEKAITNYKKVLEITPQNNAALNNLGISYYFLG 546
Query: 297 DMEQSAKCFQ 306
+++Q+ K F+
Sbjct: 547 ELKQARKYFE 556
>gi|40063717|gb|AAR38498.1| TPR repeat protein [uncultured marine bacterium 583]
Length = 733
Score = 46.6 bits (109), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 86/209 (41%), Gaps = 14/209 (6%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
EL+E + ++++ V LGL L + GRL +++ L + P+ + NL
Sbjct: 58 ELDEAVKSFEKALAIKPDYTEVNYNLGLTLQELGRLDAAVKSYEQALDIQPDYAEAHNNL 117
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL---------LCKYGSVLA---- 335
GI + G ++ + +C++ + + ++ A N L + Y LA
Sbjct: 118 GITLKELGQLDAAVQCYEKALAINPDYAEAHNNLGNALKDLNQLDAAVKSYEKTLAINPD 177
Query: 336 GAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLE 395
A A+ G L ++ A +C L +P A NL N ++ KC E
Sbjct: 178 YAEAHNNLGNVLKDLGQLDAAVKCYEKTLAINPDYAEAHNNLGNVLQDIDQLDAAVKCYE 237
Query: 396 KAAKLEPNCMSTRYAVAVSRIKDAERSQE 424
KA + P+ + Y+ + +KD R E
Sbjct: 238 KALAINPD-FAEAYSNRGNVLKDLNRLDE 265
>gi|428223797|ref|YP_007107894.1| glycosyl transferase family protein [Geitlerinema sp. PCC 7407]
gi|427983698|gb|AFY64842.1| glycosyl transferase family 9 [Geitlerinema sp. PCC 7407]
Length = 4135
Score = 46.6 bits (109), Expect = 0.037, Method: Composition-based stats.
Identities = 48/197 (24%), Positives = 81/197 (41%), Gaps = 24/197 (12%)
Query: 241 MQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQ 300
+Q D QA LG L R +++ +A+DP D NLG Y D+ Q
Sbjct: 2281 LQPDFAQAHY--NLGTALQAQKRDDEALAAYQRAIALDPGLADAYNNLGNLYRSRRDIPQ 2338
Query: 301 SAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECL 360
+ ++ I P A I ++ L GS+L A G A QA
Sbjct: 2339 AIAAYRQAI---DLQPQAAIYHSNL-----GSILQQADQYEGAIAHYQQA---------- 2380
Query: 361 LAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAE 420
+ DP+ + NL NAYY G+ + ++ + +P+C+ ++A+A+ ++ +
Sbjct: 2381 ---IDLDPQLSVARYNLGNAYYDLGEFDRAIALYQQVLRADPDCVQAQFAMALVWLQQGD 2437
Query: 421 -RSQEPTEQLSWAGNEM 436
R + WA E+
Sbjct: 2438 FRRGFAGYEARWALGEL 2454
Score = 40.0 bits (92), Expect = 2.9, Method: Composition-based stats.
Identities = 42/161 (26%), Positives = 70/161 (43%), Gaps = 15/161 (9%)
Query: 151 RKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQ------ 204
R P A AH L Q LGQP A+ Y +A + L A L +L++
Sbjct: 1241 RLAPTLADAHARLASTLQELGQPDDAIDHYRQA--VTLDSNLAGAHNNLANLLRSRDDFE 1298
Query: 205 -----IHHAQCLLPE-SSGDNSLDKEL-EPEELEEILSKLKESMQSDTRQAVVWNTLGLI 257
A LLP+ + G +L L E L E ++ ++++ A N LG
Sbjct: 1299 GASRHYQAALALLPDFAEGHYNLGGVLKELGRLPEAIAAYQQALDLKPGLARAHNNLGAC 1358
Query: 258 LLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDM 298
++G L+ +I+ +A++P+ + NLG ++GD+
Sbjct: 1359 YAETGDLERAIAAHERAIALEPDYVEAHDNLGHVLLRAGDL 1399
Score = 39.3 bits (90), Expect = 5.9, Method: Composition-based stats.
Identities = 21/84 (25%), Positives = 45/84 (53%)
Query: 240 SMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDME 299
++ ++ A++ LG++ + R +++++ +A+DP D NLG+A D+E
Sbjct: 3270 ALLTEQPTALLQTMLGILAFQEQRPEAALAHYRQAIALDPGYADAHYNLGVALSCHSDLE 3329
Query: 300 QSAKCFQDLILKDQNHPAALINYA 323
+ C+Q +++ + AAL N A
Sbjct: 3330 GAIACYQRVLVLQPRYFAALHNLA 3353
>gi|386811938|ref|ZP_10099163.1| conserved hypothetical protein [planctomycete KSU-1]
gi|386404208|dbj|GAB62044.1| conserved hypothetical protein [planctomycete KSU-1]
Length = 258
Score = 46.6 bits (109), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 69/199 (34%), Gaps = 47/199 (23%)
Query: 251 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 310
W+ LG L G +I L + P+N N GIA ++ G+ E++ K + I
Sbjct: 52 WDGLGSALYCLGNYDMAIQAYDKALTIKPDNYTTWVNKGIALYKKGNHEEALKLYNKAIE 111
Query: 311 KDQNHPAALIN------------------------------------YAALLLCKYGSVL 334
D +A N Y +LL +Y L
Sbjct: 112 SDPKLSSAWYNKGVIFIALGRNTEAMWAFEKAIAISPQDDLAWHGKGYLLILLERYEEAL 171
Query: 335 ------AGAGANTGE-----GACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYL 383
A N G G LD+ + A + A+ +PK+A W N AN Y
Sbjct: 172 QLFTKAAQGNPNRGWAWNNMGITLDKLHMYDEAIKAFDKAIDINPKSARAWHNKANTLYS 231
Query: 384 TGDHRSSGKCLEKAAKLEP 402
G + S + KA L+P
Sbjct: 232 QGKYEESMRTYNKAVALDP 250
>gi|296411907|ref|XP_002835670.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295629458|emb|CAZ79827.1| unnamed protein product [Tuber melanosporum]
Length = 309
Score = 46.6 bits (109), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 56/116 (48%), Gaps = 4/116 (3%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
ELE +L + ++ ++ D + +LL GR + I L+SLL+ PN+ + +L
Sbjct: 102 ELESVLQRYQDILKEDPTNMPIEKRRISLLLSLGRTEDGIEALTSLLSHSPNDAESWAHL 161
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGA-GANTGE 343
YF G +QS C ++++L P A +A + Y S AGA G N E
Sbjct: 162 SSLYFTQGLYQQSVFCLEEVLLI---LPNAYNIFARIGEVTYISASAGASGTNQTE 214
>gi|253702418|ref|YP_003023607.1| hypothetical protein GM21_3832 [Geobacter sp. M21]
gi|251777268|gb|ACT19849.1| TPR repeat-containing protein [Geobacter sp. M21]
Length = 688
Score = 46.6 bits (109), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 48/99 (48%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
EL+E + +E++ D WN LG+ L G L+ ++ LA+ P+ + NL
Sbjct: 283 ELDEAQACFRENLSRDPGYLPSWNALGISLQLQGLLEEAVDCYQKALALKPDYLHALNNL 342
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLL 327
G A G +EQ+ C+ ++ D+ + A N A + L
Sbjct: 343 GTASRSLGLLEQAKACYLRVLEIDEGYADARWNLALVQL 381
>gi|196232460|ref|ZP_03131313.1| Tetratricopeptide TPR_2 repeat protein [Chthoniobacter flavus
Ellin428]
gi|196223532|gb|EDY18049.1| Tetratricopeptide TPR_2 repeat protein [Chthoniobacter flavus
Ellin428]
Length = 792
Score = 46.6 bits (109), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 98/250 (39%), Gaps = 46/250 (18%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 213
P A AH+ LG + LGQ +A++SY +A EI Q HA
Sbjct: 102 PGFADAHYNLGAVLAELGQMEEALASYRRALEI-----------------QPTHA----- 139
Query: 214 ESSGDNSLDKEL-EPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLS 272
+N+L L E L+E ++ + ++Q A N LG+ L + G+ +I+
Sbjct: 140 --VAENNLGNILRELRRLDEAIAAYRRAIQLQPAYADAHNNLGVALSEQGKSDEAIAAYG 197
Query: 273 SLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGS 332
L + P+ NLG A SG ++ ++ + Q+ PA L +C+
Sbjct: 198 RALELKPDGNAVHANLGNALRASGRYAEAVVAYRRSL---QSSPARLD------ICQ--- 245
Query: 333 VLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGK 392
G G L + A E ++ +P WA+LAN +
Sbjct: 246 ---------GLGEALVLLGRFDEAGEVFRLIVRCNPDDPEAWASLANVLQRGEKLDDAIA 296
Query: 393 CLEKAAKLEP 402
C +A +L+P
Sbjct: 297 CYRQALRLDP 306
Score = 43.9 bits (102), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 74/183 (40%), Gaps = 46/183 (25%)
Query: 260 KSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAAL 319
++GRL + S+ +LAV P + + + LG Q G E + + + I D NH AAL
Sbjct: 15 QAGRLVEAESLYRQILAVQPGHAETLHLLGALAQQVGRTEMAIEFMRQAIAADPNHAAAL 74
Query: 320 INYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLAN 379
N AA LL AG GE A + +A + A+
Sbjct: 75 SNLAATLL---------AGGRAGEAAEYAR-------------------RAVEVAPGFAD 106
Query: 380 AYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQEPTEQLSWAGNEMASI 439
A+Y + G L + ++E S R A+ + +PT + A N + +I
Sbjct: 107 AHY------NLGAVLAELGQMEEALASYRRALEI----------QPTHAV--AENNLGNI 148
Query: 440 LRE 442
LRE
Sbjct: 149 LRE 151
>gi|163782812|ref|ZP_02177808.1| hypothetical protein HG1285_15791 [Hydrogenivirga sp. 128-5-R1-1]
gi|159881933|gb|EDP75441.1| hypothetical protein HG1285_15791 [Hydrogenivirga sp. 128-5-R1-1]
Length = 546
Score = 46.6 bits (109), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 103/265 (38%), Gaps = 44/265 (16%)
Query: 138 KVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARP 197
++ K L A P N ++LLG +Y G+ +A+ ++A +I EA
Sbjct: 133 RMKEAKEVLQRFAELSPNNPFPYYLLGQLYLSEGKVDRAIEYLQRALDIRKTFEA----- 187
Query: 198 ELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLI 257
++L +I+ E S S E E+L S LKE + R A+ L +
Sbjct: 188 AFVTLGKIY-------ERSERFS-----EAEKLYR--SILKED--PNNRSAL--EKLAQL 229
Query: 258 LLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPA 317
+ +GR+Q + + L +DP N + QSG+ E++ + +L + HP
Sbjct: 230 YMATGRIQEAKELYERLYRIDPTNYQYKHQFAVTLLQSGEFERAKEILAELY---RLHPE 286
Query: 318 ALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANL 377
L Y LA E A E K PK I L
Sbjct: 287 DLN-------VSYSYALALELTGNPEKAL-----------EIYEKLHKLVPKNQRIIERL 328
Query: 378 ANAYYLTGDHRSSGKCLEKAAKLEP 402
AN Y + G ++ + + +EK +L P
Sbjct: 329 ANTYIILGRYKEAEELIEKGLQLNP 353
Score = 41.6 bits (96), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 34/168 (20%), Positives = 69/168 (41%), Gaps = 23/168 (13%)
Query: 259 LKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAA 318
+KSGR++ + VL + PNN LG Y G ++++ + Q + + AA
Sbjct: 129 IKSGRMKEAKEVLQRFAELSPNNPFPYYLLGQLYLSEGKVDRAIEYLQRALDIRKTFEAA 188
Query: 319 LINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLA 378
+ G +++ + A++ + LK DP LA
Sbjct: 189 FVTL---------------------GKIYERSERFSEAEKLYRSILKEDPNNRSALEKLA 227
Query: 379 NAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIK--DAERSQE 424
Y TG + + + E+ +++P ++ AV+ ++ + ER++E
Sbjct: 228 QLYMATGRIQEAKELYERLYRIDPTNYQYKHQFAVTLLQSGEFERAKE 275
>gi|307168705|gb|EFN61737.1| Transmembrane and TPR repeat-containing protein CG4050 [Camponotus
floridanus]
Length = 980
Score = 46.6 bits (109), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 90/226 (39%), Gaps = 38/226 (16%)
Query: 159 AHFLLGLMYQRLGQPLKAVSSYEKAEEILLRC------EADIARPELLSLVQIHHAQCLL 212
AH +G Y L +A +Y KA+ +L + +A IA L V +
Sbjct: 478 AHINVGRTYNHLKMFKEAEDAYLKAKSLLPKAKPGESYQARIAPNHLNVFVNL------- 530
Query: 213 PESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLS 272
N + K E ++L + SM++D QA + G +L+K R + + V
Sbjct: 531 -----ANLIAKNATRLEEADLLYRQAISMRADYTQAYI--NRGDVLIKLNRTKEAQEVYE 583
Query: 273 SLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGS 332
L D NN D NLG+ + + G Q+ + D H AL+N +A+LL + G
Sbjct: 584 RALFYDSNNPDIYYNLGVVFLEQGKASQALAYLDKALEFDPEHEQALLN-SAILLQELG- 641
Query: 333 VLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLA 378
+A VA+E LL L+ D + NL
Sbjct: 642 ----------------RAELRKVARERLLKLLRKDSNNERVHFNLG 671
>gi|359460635|ref|ZP_09249198.1| TPR domain-containing protein [Acaryochloris sp. CCMEE 5410]
Length = 562
Score = 46.2 bits (108), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 74/174 (42%), Gaps = 23/174 (13%)
Query: 148 HVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHH 207
V + PK+A A+F G+ Y ++G A++ Y KA ++ + A + LVQ++
Sbjct: 323 QVIKFQPKSALAYFNRGVAYSKVGDNATALADYSKAIQLDPKYAAALYN---RGLVQLNQ 379
Query: 208 AQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSS 267
NS D ++ S+Q DT+ A + G LK+G +++
Sbjct: 380 G----------NSQD----------AIADFTASIQMDTKYAAAYKNRGTAHLKAGNTEAA 419
Query: 268 ISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALIN 321
I+ + + + + N GIA+ +G E + + ++ D AA N
Sbjct: 420 IADFTQAITFNAEDTLAYYNRGIAHSTAGQNEAAIADYSQVLTLDPKFAAAYTN 473
Score = 38.9 bits (89), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 66/169 (39%), Gaps = 21/169 (12%)
Query: 234 LSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYF 293
L+ +++Q D + A GL+ L G Q +I+ ++ + +D N G A+
Sbjct: 352 LADYSKAIQLDPKYAAALYNRGLVQLNQGNSQDAIADFTASIQMDTKYAAAYKNRGTAHL 411
Query: 294 QSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAV 353
++G+ E + F I + A L Y +A + A E A D + +
Sbjct: 412 KAGNTEAAIADFTQAITFN----------AEDTLAYYNRGIAHSTAGQNEAAIADYSQVL 461
Query: 354 NVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 402
+ DPK A + N N + GD ++ K +A + P
Sbjct: 462 TL-----------DPKFAAAYTNRGNLHAAQGDRDAALKDYSQAIEANP 499
>gi|322421642|ref|YP_004200865.1| hypothetical protein GM18_4175 [Geobacter sp. M18]
gi|320128029|gb|ADW15589.1| Tetratricopeptide TPR_1 repeat-containing protein [Geobacter sp.
M18]
Length = 1104
Score = 46.2 bits (108), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 72/172 (41%), Gaps = 23/172 (13%)
Query: 254 LGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQ 313
LG L + GR++ + L + P N NLG+A G+ EQ+ F + I D
Sbjct: 81 LGFALARVGRMEEAAQKLREACRLAPENAGYRNNLGLALSALGEGEQAQASFLEAIRLDP 140
Query: 314 NHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKAD-PKAAH 372
+P L N A+L ++G A A+ E L L+ D P+A H
Sbjct: 141 LYPEPLSNL-AILFERFG----------------QSAEAIRSLSEAL--RLRPDYPEAHH 181
Query: 373 IWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQE 424
NLAN G HR + +A +L P + A+ + + AE ++E
Sbjct: 182 ---NLANTLKSQGRHREAIAHYREALRLRPGYEEAQSALLFTLLYPAEGAEE 230
>gi|386812211|ref|ZP_10099436.1| conserved hypothetical protein [planctomycete KSU-1]
gi|386404481|dbj|GAB62317.1| conserved hypothetical protein [planctomycete KSU-1]
Length = 418
Score = 46.2 bits (108), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 103/266 (38%), Gaps = 29/266 (10%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 213
P++A H+ LGL Y V EK E I A + P + H CL
Sbjct: 149 PQDAVTHYHLGLAY---------VGENEKEEAICAFMAAIVINP---NYTDAHF--CL-- 192
Query: 214 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 273
G LD +L L+E LS+ K+ + A LGL G +++
Sbjct: 193 ---GQVYLDMKL----LDEALSEFKKVTDINPHHAPAHYHLGLTYYAKGDTDNAMDAYKK 245
Query: 274 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALIN----YA--ALLL 327
+ +DP N NLGI Y + + + F ++ D + A YA +L
Sbjct: 246 SIEIDPKNPKVHYNLGIVYADERLFDNAIEEFSTVVKLDSDDAEAHYRLGKAYADKRVLA 305
Query: 328 CKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDH 387
SV A A+ A++ A L +++ +P ++ +L +AY +
Sbjct: 306 KAIASVQKAAAAHYNIQNPYSDKRALDEAIISLQKSIEVNPYDPSVYFDLGSAYSQSKVL 365
Query: 388 RSSGKCLEKAAKLEPNCMSTRYAVAV 413
+ K LE+ +++PN Y + +
Sbjct: 366 DDAAKALEETIRIDPNFAKAHYGLGM 391
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 43/202 (21%), Positives = 88/202 (43%), Gaps = 27/202 (13%)
Query: 232 EILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIA 291
E +++LK++++ D + LGL+ + G + +++ L S++ +DPN+ +A
Sbjct: 68 EAIAELKKTVEIDPTCKDAFFQLGLLYMNKGLWEEAVAALQSVVQLDPNH-------ELA 120
Query: 292 YFQSGDMEQSAKCFQDLI-----LKDQNHPAALINYAALL-----------LCKYGSVLA 335
Y + GD+ +S K F++ + + D N A+ +Y L +C + + +
Sbjct: 121 YSKLGDIYRSKKMFREAVQEYKKVLDINPQDAVTHYHLGLAYVGENEKEEAICAFMAAIV 180
Query: 336 GAGANTGEGACLDQASA-VNVAKECLLAALKA---DPKAAHIWANLANAYYLTGDHRSSG 391
T CL Q + + E L K +P A +L YY GD ++
Sbjct: 181 INPNYTDAHFCLGQVYLDMKLLDEALSEFKKVTDINPHHAPAHYHLGLTYYAKGDTDNAM 240
Query: 392 KCLEKAAKLEPNCMSTRYAVAV 413
+K+ +++P Y + +
Sbjct: 241 DAYKKSIEIDPKNPKVHYNLGI 262
>gi|410925671|ref|XP_003976303.1| PREDICTED: tetratricopeptide repeat protein 13-like [Takifugu
rubripes]
Length = 824
Score = 46.2 bits (108), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 48/105 (45%), Gaps = 1/105 (0%)
Query: 234 LSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYF 293
+ ++S++ Q + GL G L+ +I L + + D +LG AY
Sbjct: 233 MEDFQQSLELKKNQPIAMLYKGLTFFHRGLLKEAIETFREALKLKSDFIDAYKSLGQAYR 292
Query: 294 QSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAG 338
+ GD E + + FQ +L DQNH +L ++L +GS+ G
Sbjct: 293 ELGDFESAMESFQKALLLDQNHIQSL-QLRGMMLYHHGSLQEAIG 336
>gi|91203185|emb|CAJ72824.1| hypothetical protein kustd2079 [Candidatus Kuenenia
stuttgartiensis]
Length = 319
Score = 46.2 bits (108), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 67/170 (39%), Gaps = 13/170 (7%)
Query: 225 LEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDC 284
+ EE E + LK++++ + V ++ LG+ KSG+ ++ VL + +DPN
Sbjct: 124 FDMEEYEPAIEYLKKTIEMNPDYKVAYSLLGISYAKSGKYDEAVKVLKKRIELDPNLAIT 183
Query: 285 IGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL---------LCKYGSVL- 334
NLG+ Y G +++ + + + H L N A L L Y +
Sbjct: 184 YSNLGLVYTMKGSNKEALVEYNKALGINPYHEETLFNIAFLYENMGQIDEALAYYNKTVE 243
Query: 335 ---AGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAY 381
A A G + + A +L A+P + NL N Y
Sbjct: 244 CNSGNAKAQYNLGLNYLKKKQYDEAINAFEISLMANPDNIEAYNNLGNVY 293
>gi|13775066|gb|AAK39123.1|AF363030_1 UDP-N-acetylglucosaminyltransferase [Mus musculus]
Length = 1046
Score = 46.2 bits (108), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 62/155 (40%), Gaps = 21/155 (13%)
Query: 251 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 310
++ LG + + G+LQ +I L + P+ D NL A +GDME + + +
Sbjct: 92 YSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAY----- 146
Query: 311 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 370
+ + Y L C + G L + AK C L A++ P
Sbjct: 147 ------VSALQYNPDLYC----------VRSDLGNLLKALGRLEEAKACYLKAIETQPNF 190
Query: 371 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 405
A W+NL + G+ + EKA L+PN +
Sbjct: 191 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL 225
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 129/330 (39%), Gaps = 67/330 (20%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
LEE + +++++ AV W+ LG + G + +I + +DPN D
Sbjct: 172 RLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLD----- 226
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL- 347
AY G++ + A+ F + AA + AL L +V+ G AC+
Sbjct: 227 --AYINLGNVLKEARIFDRAV-------AAYLR--ALSLSPNHAVV------HGNLACVY 269
Query: 348 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 407
+ +++A + A++ P + NLANA G + C A +L P
Sbjct: 270 YEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPT---- 325
Query: 408 RYAVAVSRIKDAERSQ--------------EPTEQLSWAGNEMASILREGDPVQIEPPIA 453
+A +++ + + +R Q E + + A + +AS+L++ +Q A
Sbjct: 326 -HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQ----EA 380
Query: 454 WAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKAD 513
+ + A A+ N L +M++ G A +C A++ +
Sbjct: 381 LMHYKEAIRISPTFADAYSNMGNTLKEMQDVQG---------------ALQCYTRAIQIN 425
Query: 514 PKAAHIWANLANAYYLTGDHRSSGKCLEKV 543
P A +NLA+ H+ SG E +
Sbjct: 426 PAFADAHSNLASI------HKDSGNIPEAI 449
>gi|395858889|ref|XP_003801787.1| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit isoform
1 [Otolemur garnettii]
Length = 1046
Score = 46.2 bits (108), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 62/155 (40%), Gaps = 21/155 (13%)
Query: 251 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 310
++ LG + + G+LQ +I L + P+ D NL A +GDME + + +
Sbjct: 92 YSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAY----- 146
Query: 311 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 370
+ + Y L C + G L + AK C L A++ P
Sbjct: 147 ------VSALQYNPDLYC----------VRSDLGNLLKALGRLEEAKACYLKAIETQPNF 190
Query: 371 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 405
A W+NL + G+ + EKA L+PN +
Sbjct: 191 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL 225
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 129/330 (39%), Gaps = 67/330 (20%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
LEE + +++++ AV W+ LG + G + +I + +DPN D
Sbjct: 172 RLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLD----- 226
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL- 347
AY G++ + A+ F + AA + AL L +V+ G AC+
Sbjct: 227 --AYINLGNVLKEARIFDRAV-------AAYLR--ALSLSPNHAVV------HGNLACVY 269
Query: 348 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 407
+ +++A + A++ P + NLANA G + C A +L P
Sbjct: 270 YEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPT---- 325
Query: 408 RYAVAVSRIKDAERSQ--------------EPTEQLSWAGNEMASILREGDPVQIEPPIA 453
+A +++ + + +R Q E + + A + +AS+L++ +Q A
Sbjct: 326 -HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQ----EA 380
Query: 454 WAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKAD 513
+ + A A+ N L +M++ G A +C A++ +
Sbjct: 381 LMHYKEAIRISPTFADAYSNMGNTLKEMQDVQG---------------ALQCYTRAIQIN 425
Query: 514 PKAAHIWANLANAYYLTGDHRSSGKCLEKV 543
P A +NLA+ H+ SG E +
Sbjct: 426 PAFADAHSNLASI------HKDSGNIPEAI 449
>gi|298246522|ref|ZP_06970328.1| serine/threonine protein kinase with TPR repeats [Ktedonobacter
racemifer DSM 44963]
gi|297554003|gb|EFH87868.1| serine/threonine protein kinase with TPR repeats [Ktedonobacter
racemifer DSM 44963]
Length = 747
Score = 46.2 bits (108), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 33/173 (19%), Positives = 69/173 (39%), Gaps = 21/173 (12%)
Query: 231 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 290
E+ L+ ++ D R A+ W+ LIL + + + ++ L+ +PN+ + G+
Sbjct: 460 EQALNAFDTALSFDPRMALAWSNKSLILRQMRKYEEALQASEQALSYEPNSALNWNSKGL 519
Query: 291 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQA 350
+ G + ++ + +Q+ + +D AL G G L
Sbjct: 520 ILLEMGRLREAYQAYQEALKRDSRFAPALY---------------------GMGNVLYAQ 558
Query: 351 SAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 403
A + AL+ DP +W G++R S + E+A +++P+
Sbjct: 559 QKFKSALDNYDRALQFDPNYVKVWERRGQLLQELGNYRRSLESFERATQIDPS 611
>gi|432118087|gb|ELK37988.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
110 kDa subunit [Myotis davidii]
Length = 1046
Score = 46.2 bits (108), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 62/155 (40%), Gaps = 21/155 (13%)
Query: 251 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 310
++ LG + + G+LQ +I L + P+ D NL A +GDME + + +
Sbjct: 92 YSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAY----- 146
Query: 311 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 370
+ + Y L C + G L + AK C L A++ P
Sbjct: 147 ------VSALQYNPDLYC----------VRSDLGNLLKALGRLEEAKACYLKAIETQPNF 190
Query: 371 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 405
A W+NL + G+ + EKA L+PN +
Sbjct: 191 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL 225
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 129/330 (39%), Gaps = 67/330 (20%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
LEE + +++++ AV W+ LG + G + +I + +DPN D
Sbjct: 172 RLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLD----- 226
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL- 347
AY G++ + A+ F + AA + AL L +V+ G AC+
Sbjct: 227 --AYINLGNVLKEARIFDRAV-------AAYLR--ALSLSPNHAVV------HGNLACVY 269
Query: 348 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 407
+ +++A + A++ P + NLANA G + C A +L P
Sbjct: 270 YEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPT---- 325
Query: 408 RYAVAVSRIKDAERSQ--------------EPTEQLSWAGNEMASILREGDPVQIEPPIA 453
+A +++ + + +R Q E + + A + +AS+L++ +Q A
Sbjct: 326 -HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQ----EA 380
Query: 454 WAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKAD 513
+ + A A+ N L +M++ G A +C A++ +
Sbjct: 381 LMHYKEAIRISPTFADAYSNMGNTLKEMQDVQG---------------ALQCYTRAIQIN 425
Query: 514 PKAAHIWANLANAYYLTGDHRSSGKCLEKV 543
P A +NLA+ H+ SG E +
Sbjct: 426 PAFADAHSNLASI------HKDSGNIPEAI 449
>gi|406981036|gb|EKE02561.1| hypothetical protein ACD_20C00362G0010 [uncultured bacterium]
Length = 630
Score = 46.2 bits (108), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 114/272 (41%), Gaps = 44/272 (16%)
Query: 152 KMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCL 211
K P+ ++LL L +++ G +A+ +Y KA EI R + L+L +++ Q
Sbjct: 137 KYPQLDDCYYLLALNHEKTGNIPQAIENYRKAIEINSR-----SHKSYLALGILYYNQKQ 191
Query: 212 LPESSGD--NSLDKELE--------------PEELEEILSKLKESMQSDTRQAVVWNTLG 255
L E++ + N+L + E E+ +++ K + + + +N LG
Sbjct: 192 LDEANKELQNALSIDFNNTKIHFYLGLIYNAQENFEKAIAEFKYVVTFEPKNIEAYNNLG 251
Query: 256 LILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNH 315
L G L+ +I + +A++P+N + LG YF + + + Q I +H
Sbjct: 252 LAYGFLGWLEEAIQEFKTAIALNPDNPEVRYALGYIYFMKKNYQYAQIELQTAIRLKPDH 311
Query: 316 PAALINYAALLLCKYGSVLAGAGANTGEGACLDQ-ASAVNVAKECLLAALKADPKAAHIW 374
+ L+L G V A LD+ A++ E ALK +P +
Sbjct: 312 ELSY-----LIL---GQVYAH----------LDRFKEAIDEYNE----ALKLNPNNPTTY 349
Query: 375 ANLANAYYLTGDHRSSGKCLEKAAKLEPNCMS 406
NLA A G + +C +K +L P +S
Sbjct: 350 YNLAFALNTLGMSEKATECYKKVIELNPAYLS 381
Score = 45.8 bits (107), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 91/394 (23%), Positives = 156/394 (39%), Gaps = 70/394 (17%)
Query: 148 HVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPEL-LSLVQIH 206
+V PKN A+ LGL Y LG +A+ ++ A I L + PE+ +L I+
Sbjct: 235 YVVTFEPKNIEAYNNLGLAYGFLGWLEEAIQEFKTA--IALNPD----NPEVRYALGYIY 288
Query: 207 HAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQS 266
+ K + ++E L+ +++ + + LG + R +
Sbjct: 289 F-------------MKKNYQYAQIE-----LQTAIRLKPDHELSYLILGQVYAHLDRFKE 330
Query: 267 SISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL 326
+I + L ++PNN NL A G E++ +C++ +I + +PA L Y L
Sbjct: 331 AIDEYNEALKLNPNNPTTYYNLAFALNTLGMSEKATECYKKVI---ELNPAYLSAYLDL- 386
Query: 327 LCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGD 386
G++L G + AKEC AA+ + +L Y + +
Sbjct: 387 ----GNILLSNGQQ-------------DFAKECFEAAINRSSNFGEAYYSLGLCYIRSEE 429
Query: 387 HRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDA--ERSQEPTEQLSWAGNEMASILRE-G 443
++ + C + A + PN Y + KD E + E EQ E A+ + G
Sbjct: 430 YQKALYCFDHAIAINPNLSDAYYQKGLIYKKDGNMELAIENIEQAIKLDTENAASYNDLG 489
Query: 444 DPVQI----EPPIAWAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAV 499
QI E I +A +K A+F +N L + G + F +
Sbjct: 490 LAYQILGNQEKAI-----SAFKK------ASFLDPDNSLYR----HNLGIALFEGKRYKE 534
Query: 500 NVAKECLLAALKADPKAAHIWANLANAYYLTGDH 533
++ + L A++ P A I+ NLAN Y GD+
Sbjct: 535 SIVE--LRRAIRLSPYNADIYFNLANIYEKIGDY 566
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 67/171 (39%), Gaps = 25/171 (14%)
Query: 251 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDME----------- 299
+ +LGL ++S Q ++ +A++PN D G+ Y + G+ME
Sbjct: 417 YYSLGLCYIRSEEYQKALYCFDHAIAINPNLSDAYYQKGLIYKKDGNMELAIENIEQAIK 476
Query: 300 ---QSAKCFQDL-----ILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQAS 351
++A + DL IL +Q + A+ L G EG + S
Sbjct: 477 LDTENAASYNDLGLAYQILGNQEKAISAFKKASFLDPDNSLYRHNLGIALFEGKRYKE-S 535
Query: 352 AVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 402
V + + A++ P A I+ NLAN Y GD+ + E K P
Sbjct: 536 IVELRR-----AIRLSPYNADIYFNLANIYEKIGDYADAVDSYENFVKHNP 581
>gi|270005381|gb|EFA01829.1| hypothetical protein TcasGA2_TC007431 [Tribolium castaneum]
Length = 921
Score = 46.2 bits (108), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 70/176 (39%), Gaps = 39/176 (22%)
Query: 170 LGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEE 229
+G+ + +++AEE LR A+ LLP++ S + P
Sbjct: 485 VGRTYNHLKMFKEAEEAYLR------------------AKSLLPKAKPGESYQARIAPNH 526
Query: 230 LEEIL----------SKLKE---------SMQSDTRQAVVWNTLGLILLKSGRLQSSISV 270
L L ++L+E SM++D QA + G IL+K R + + V
Sbjct: 527 LNVFLNLANLISKNSTRLEEADMLYRQAISMRADYTQAYI--NRGDILIKLNRTKEAQEV 584
Query: 271 LSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL 326
L D NN D NLG+ + + G Q+ + D H AL+N A LL
Sbjct: 585 YERALLYDSNNPDIYYNLGVVFLEQGKASQALAYLDKALEFDPEHEQALLNSAILL 640
>gi|46909607|ref|NP_631883.2| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
110 kDa subunit [Mus musculus]
gi|146325019|sp|Q8CGY8.2|OGT1_MOUSE RecName: Full=UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit;
AltName: Full=O-GlcNAc transferase subunit p110;
AltName: Full=O-linked N-acetylglucosamine transferase
110 kDa subunit; Short=OGT
gi|34785719|gb|AAH57319.1| O-linked N-acetylglucosamine (GlcNAc) transferase
(UDP-N-acetylglucosamine:polypeptide-N-
acetylglucosaminyl transferase) [Mus musculus]
gi|148682191|gb|EDL14138.1| O-linked N-acetylglucosamine (GlcNAc) transferase
(UDP-N-acetylglucosamine:polypeptide-N-
acetylglucosaminyl transferase), isoform CRA_b [Mus
musculus]
Length = 1046
Score = 46.2 bits (108), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 62/155 (40%), Gaps = 21/155 (13%)
Query: 251 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 310
++ LG + + G+LQ +I L + P+ D NL A +GDME + + +
Sbjct: 92 YSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAY----- 146
Query: 311 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 370
+ + Y L C + G L + AK C L A++ P
Sbjct: 147 ------VSALQYNPDLYC----------VRSDLGNLLKALGRLEEAKACYLKAIETQPNF 190
Query: 371 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 405
A W+NL + G+ + EKA L+PN +
Sbjct: 191 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL 225
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 129/330 (39%), Gaps = 67/330 (20%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
LEE + +++++ AV W+ LG + G + +I + +DPN D
Sbjct: 172 RLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLD----- 226
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL- 347
AY G++ + A+ F + AA + AL L +V+ G AC+
Sbjct: 227 --AYINLGNVLKEARIFDRAV-------AAYLR--ALSLSPNHAVV------HGNLACVY 269
Query: 348 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 407
+ +++A + A++ P + NLANA G + C A +L P
Sbjct: 270 YEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPT---- 325
Query: 408 RYAVAVSRIKDAERSQ--------------EPTEQLSWAGNEMASILREGDPVQIEPPIA 453
+A +++ + + +R Q E + + A + +AS+L++ +Q A
Sbjct: 326 -HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQ----EA 380
Query: 454 WAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKAD 513
+ + A A+ N L +M++ G A +C A++ +
Sbjct: 381 LMHYKEAIRISPTFADAYSNMGNTLKEMQDVQG---------------ALQCYTRAIQIN 425
Query: 514 PKAAHIWANLANAYYLTGDHRSSGKCLEKV 543
P A +NLA+ H+ SG E +
Sbjct: 426 PAFADAHSNLASI------HKDSGNIPEAI 449
>gi|427711565|ref|YP_007060189.1| hypothetical protein Syn6312_0417 [Synechococcus sp. PCC 6312]
gi|427375694|gb|AFY59646.1| tetratricopeptide repeat protein [Synechococcus sp. PCC 6312]
Length = 335
Score = 46.2 bits (108), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 34/168 (20%), Positives = 73/168 (43%), Gaps = 21/168 (12%)
Query: 238 KESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGD 297
+++++ + R + L +IL + G Q++I ++ ++P N + +LGI Y GD
Sbjct: 107 RQAIRLNPRYVQAYQGLAVILARLGDTQTAIQTYRQIIVMEPRNWEAFQSLGILYLNQGD 166
Query: 298 MEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAK 357
Q+ + N+P +N G L +G T A L+QA+++
Sbjct: 167 ANQALTALRQASQFVPNNPNVQLN--------LGQALLQSGDKTQGLAALEQAASLG--- 215
Query: 358 ECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 405
+ D +I + + L +++ + + ++A +L PN +
Sbjct: 216 -------QGD---GNIQLTVGKVFLLQNNYQGAIRAFQRATQLLPNSI 253
>gi|27499606|gb|AAO17363.1| O-linked GlcNAc transferase [Mus musculus]
Length = 1046
Score = 46.2 bits (108), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 62/155 (40%), Gaps = 21/155 (13%)
Query: 251 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 310
++ LG + + G+LQ +I L + P+ D NL A +GDME + + +
Sbjct: 92 YSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAY----- 146
Query: 311 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 370
+ + Y L C + G L + AK C L A++ P
Sbjct: 147 ------VSALQYNPDLYC----------VRSDLGNLLKALGRLEEAKACYLKAIETQPNF 190
Query: 371 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 405
A W+NL + G+ + EKA L+PN +
Sbjct: 191 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL 225
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 129/330 (39%), Gaps = 67/330 (20%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
LEE + +++++ AV W+ LG + G + +I + +DPN D
Sbjct: 172 RLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLD----- 226
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL- 347
AY G++ + A+ F + AA + AL L +V+ G AC+
Sbjct: 227 --AYINLGNVLKEARIFDRAV-------AAYLR--ALSLSPNHAVV------HGNLACVY 269
Query: 348 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 407
+ +++A + A++ P + NLANA G + C A +L P
Sbjct: 270 YEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPT---- 325
Query: 408 RYAVAVSRIKDAERSQ--------------EPTEQLSWAGNEMASILREGDPVQIEPPIA 453
+A +++ + + +R Q E + + A + +AS+L++ +Q A
Sbjct: 326 -HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQ----EA 380
Query: 454 WAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKAD 513
+ + A A+ N L +M++ G A +C A++ +
Sbjct: 381 LMHYKEAIRISPTFADAYSNMGNTLKEMQDVQG---------------ALQCYTRAIQIN 425
Query: 514 PKAAHIWANLANAYYLTGDHRSSGKCLEKV 543
P A +NLA+ H+ SG E +
Sbjct: 426 PAFADAHSNLASI------HKDSGNIPEAI 449
>gi|74007670|ref|XP_849392.1| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit isoform
2 [Canis lupus familiaris]
Length = 1046
Score = 46.2 bits (108), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 62/155 (40%), Gaps = 21/155 (13%)
Query: 251 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 310
++ LG + + G+LQ +I L + P+ D NL A +GDME + + +
Sbjct: 92 YSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAY----- 146
Query: 311 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 370
+ + Y L C + G L + AK C L A++ P
Sbjct: 147 ------VSALQYNPDLYC----------VRSDLGNLLKALGRLEEAKACYLKAIETQPNF 190
Query: 371 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 405
A W+NL + G+ + EKA L+PN +
Sbjct: 191 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL 225
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 129/330 (39%), Gaps = 67/330 (20%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
LEE + +++++ AV W+ LG + G + +I + +DPN D
Sbjct: 172 RLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLD----- 226
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL- 347
AY G++ + A+ F + AA + AL L +V+ G AC+
Sbjct: 227 --AYINLGNVLKEARIFDRAV-------AAYLR--ALSLSPNHAVV------HGNLACVY 269
Query: 348 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 407
+ +++A + A++ P + NLANA G + C A +L P
Sbjct: 270 YEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPT---- 325
Query: 408 RYAVAVSRIKDAERSQ--------------EPTEQLSWAGNEMASILREGDPVQIEPPIA 453
+A +++ + + +R Q E + + A + +AS+L++ +Q A
Sbjct: 326 -HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQ----EA 380
Query: 454 WAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKAD 513
+ + A A+ N L +M++ G A +C A++ +
Sbjct: 381 LMHYKEAIRISPTFADAYSNMGNTLKEMQDVQG---------------ALQCYTRAIQIN 425
Query: 514 PKAAHIWANLANAYYLTGDHRSSGKCLEKV 543
P A +NLA+ H+ SG E +
Sbjct: 426 PAFADAHSNLASI------HKDSGNIPEAI 449
>gi|354502726|ref|XP_003513433.1| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit
[Cricetulus griseus]
Length = 1046
Score = 46.2 bits (108), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 62/155 (40%), Gaps = 21/155 (13%)
Query: 251 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 310
++ LG + + G+LQ +I L + P+ D NL A +GDME + + +
Sbjct: 92 YSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAY----- 146
Query: 311 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 370
+ + Y L C + G L + AK C L A++ P
Sbjct: 147 ------VSALQYNPDLYC----------VRSDLGNLLKALGRLEEAKACYLKAIETQPNF 190
Query: 371 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 405
A W+NL + G+ + EKA L+PN +
Sbjct: 191 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL 225
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 130/330 (39%), Gaps = 67/330 (20%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
LEE + +++++ AV W+ LG + G + +I + +DPN D
Sbjct: 172 RLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLD----- 226
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL- 347
AY G++ + A+ F + AA + AL L +V+ G AC+
Sbjct: 227 --AYINLGNVLKEARIFDRAV-------AAYLR--ALSLSPNHAVV------HGNLACVY 269
Query: 348 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 407
+ +++A + A++ P + NLANA G + C A +L P
Sbjct: 270 YEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPT---- 325
Query: 408 RYAVAVSRIKDAERSQ--------------EPTEQLSWAGNEMASILREGDPVQIEPPIA 453
+A +++ + + +R Q E + + A + +AS+L++ +Q A
Sbjct: 326 -HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQ----EA 380
Query: 454 WAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKAD 513
+ + + A A+ N L +M++ G A +C A++ +
Sbjct: 381 LMHYKEAIRISPKFADAYSNMGNTLKEMQDVQG---------------ALQCYTRAIQIN 425
Query: 514 PKAAHIWANLANAYYLTGDHRSSGKCLEKV 543
P A +NLA+ H+ SG E +
Sbjct: 426 PAFADAHSNLASI------HKDSGNIPEAI 449
>gi|190340092|gb|AAI63923.1| O-linked N-acetylglucosamine (GlcNAc) transferase
(UDP-N-acetylglucosamine:polypeptide-N-
acetylglucosaminyl transferase) [Danio rerio]
Length = 1046
Score = 46.2 bits (108), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 62/155 (40%), Gaps = 21/155 (13%)
Query: 251 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 310
++ LG + + G+LQ +I L + P+ D NL A +GDME + + +
Sbjct: 92 YSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAY----- 146
Query: 311 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 370
+ + Y L C + G L + AK C L A++ P
Sbjct: 147 ------VSALQYNPDLYC----------VRSDLGNLLKALGRLEEAKACYLKAIETQPNF 190
Query: 371 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 405
A W+NL + G+ + EKA L+PN +
Sbjct: 191 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL 225
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 88/422 (20%), Positives = 161/422 (38%), Gaps = 84/422 (19%)
Query: 151 RKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQC 210
++ P A A+ LG +Y+ GQ +A+ Y A LR + D I+ A
Sbjct: 83 KQNPMLAEAYSNLGNVYKERGQLQEAIEHYRHA----LRLKPDFIDG------YINLAAA 132
Query: 211 LLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISV 270
L+ ++GD +E + ++Q + V + LG +L GRL+ + +
Sbjct: 133 LV--AAGD-----------MEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKAC 179
Query: 271 LSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKY 330
+ PN NLG + G++ + F+ + D N A IN +L K
Sbjct: 180 YLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVL--KE 237
Query: 331 GSVLAGAGANT--------------GEGACL-DQASAVNVAKECLLAALKADPKAAHIWA 375
+ A A G AC+ + +++A + A++ P +
Sbjct: 238 ARIFDRAVAGYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYC 297
Query: 376 NLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQ------------ 423
NLANA G+ + +C A +L P +A +++ + + +R Q
Sbjct: 298 NLANALKEKGNVSEAEECYNTALRLCPT-----HADSLNNLANIKREQGNIEEAVQLYRK 352
Query: 424 --EPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFAAVQKTHHEVAAAFETEENELSKM 481
E + + A + +AS+L++ +Q A + + A A+ N L +M
Sbjct: 353 ALEVFPEFAAAHSNLASVLQQQGKLQ----EALMHYKEAIRISPTFADAYSNMGNTLKEM 408
Query: 482 EECAGAGESAFLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLE 541
++ G A +C A++ +P A +NLA+ H+ SG E
Sbjct: 409 QDVQG---------------ALQCYTRAIQINPAFADAHSNLASI------HKDSGNIPE 447
Query: 542 KV 543
+
Sbjct: 448 AI 449
>gi|91080933|ref|XP_974172.1| PREDICTED: similar to GA17918-PA [Tribolium castaneum]
Length = 947
Score = 46.2 bits (108), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 70/176 (39%), Gaps = 39/176 (22%)
Query: 170 LGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEE 229
+G+ + +++AEE LR A+ LLP++ S + P
Sbjct: 511 VGRTYNHLKMFKEAEEAYLR------------------AKSLLPKAKPGESYQARIAPNH 552
Query: 230 LEEIL----------SKLKE---------SMQSDTRQAVVWNTLGLILLKSGRLQSSISV 270
L L ++L+E SM++D QA + G IL+K R + + V
Sbjct: 553 LNVFLNLANLISKNSTRLEEADMLYRQAISMRADYTQAYI--NRGDILIKLNRTKEAQEV 610
Query: 271 LSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL 326
L D NN D NLG+ + + G Q+ + D H AL+N A LL
Sbjct: 611 YERALLYDSNNPDIYYNLGVVFLEQGKASQALAYLDKALEFDPEHEQALLNSAILL 666
>gi|32307148|ref|NP_858058.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
110 kDa subunit isoform 1 [Homo sapiens]
gi|397498834|ref|XP_003820179.1| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit isoform
1 [Pan paniscus]
gi|426396356|ref|XP_004064413.1| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit isoform
1 [Gorilla gorilla gorilla]
gi|68067509|sp|O15294.3|OGT1_HUMAN RecName: Full=UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit;
AltName: Full=O-GlcNAc transferase subunit p110;
AltName: Full=O-linked N-acetylglucosamine transferase
110 kDa subunit; Short=OGT
gi|18250915|emb|CAC86128.1| UDP-N-acetylglucosamine: polypeptide-N-acetylglucosaminyl
transferase [Homo sapiens]
gi|23315618|gb|AAH38180.1| O-linked N-acetylglucosamine (GlcNAc) transferase
(UDP-N-acetylglucosamine:polypeptide-N-
acetylglucosaminyl transferase) [Homo sapiens]
gi|30268372|emb|CAD89970.1| hypothetical protein [Homo sapiens]
gi|119625691|gb|EAX05286.1| O-linked N-acetylglucosamine (GlcNAc) transferase
(UDP-N-acetylglucosamine:polypeptide-N-
acetylglucosaminyl transferase), isoform CRA_b [Homo
sapiens]
gi|410227760|gb|JAA11099.1| O-linked N-acetylglucosamine (GlcNAc) transferase
(UDP-N-acetylglucosamine:polypeptide-N-
acetylglucosaminyl transferase) [Pan troglodytes]
gi|410227764|gb|JAA11101.1| O-linked N-acetylglucosamine (GlcNAc) transferase
(UDP-N-acetylglucosamine:polypeptide-N-
acetylglucosaminyl transferase) [Pan troglodytes]
gi|410257116|gb|JAA16525.1| O-linked N-acetylglucosamine (GlcNAc) transferase
(UDP-N-acetylglucosamine:polypeptide-N-
acetylglucosaminyl transferase) [Pan troglodytes]
gi|410342219|gb|JAA40056.1| O-linked N-acetylglucosamine (GlcNAc) transferase
(UDP-N-acetylglucosamine:polypeptide-N-
acetylglucosaminyl transferase) [Pan troglodytes]
Length = 1046
Score = 46.2 bits (108), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 62/155 (40%), Gaps = 21/155 (13%)
Query: 251 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 310
++ LG + + G+LQ +I L + P+ D NL A +GDME + + +
Sbjct: 92 YSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAY----- 146
Query: 311 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 370
+ + Y L C + G L + AK C L A++ P
Sbjct: 147 ------VSALQYNPDLYC----------VRSDLGNLLKALGRLEEAKACYLKAIETQPNF 190
Query: 371 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 405
A W+NL + G+ + EKA L+PN +
Sbjct: 191 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL 225
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 129/330 (39%), Gaps = 67/330 (20%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
LEE + +++++ AV W+ LG + G + +I + +DPN D
Sbjct: 172 RLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLD----- 226
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL- 347
AY G++ + A+ F + AA + AL L +V+ G AC+
Sbjct: 227 --AYINLGNVLKEARIFDRAV-------AAYLR--ALSLSPNHAVV------HGNLACVY 269
Query: 348 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 407
+ +++A + A++ P + NLANA G + C A +L P
Sbjct: 270 YEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPT---- 325
Query: 408 RYAVAVSRIKDAERSQ--------------EPTEQLSWAGNEMASILREGDPVQIEPPIA 453
+A +++ + + +R Q E + + A + +AS+L++ +Q A
Sbjct: 326 -HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQ----EA 380
Query: 454 WAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKAD 513
+ + A A+ N L +M++ G A +C A++ +
Sbjct: 381 LMHYKEAIRISPTFADAYSNMGNTLKEMQDVQG---------------ALQCYTRAIQIN 425
Query: 514 PKAAHIWANLANAYYLTGDHRSSGKCLEKV 543
P A +NLA+ H+ SG E +
Sbjct: 426 PAFADAHSNLASI------HKDSGNIPEAI 449
>gi|31873825|emb|CAD97853.1| hypothetical protein [Homo sapiens]
Length = 1046
Score = 46.2 bits (108), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 62/155 (40%), Gaps = 21/155 (13%)
Query: 251 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 310
++ LG + + G+LQ +I L + P+ D NL A +GDME + + +
Sbjct: 92 YSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAY----- 146
Query: 311 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 370
+ + Y L C + G L + AK C L A++ P
Sbjct: 147 ------VSALQYNPDLYC----------VRSDLGNLLKALGRLEEAKACYLKAIETQPNF 190
Query: 371 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 405
A W+NL + G+ + EKA L+PN +
Sbjct: 191 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL 225
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 129/330 (39%), Gaps = 67/330 (20%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
LEE + +++++ AV W+ LG + G + +I + +DPN D
Sbjct: 172 RLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLD----- 226
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL- 347
AY G++ + A+ F + AA + AL L +V+ G AC+
Sbjct: 227 --AYINLGNVLKEARIFDRAV-------AAYLR--ALSLSPNHAVV------HGNLACVY 269
Query: 348 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 407
+ +++A + A++ P + NLANA G + C A +L P
Sbjct: 270 YEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPT---- 325
Query: 408 RYAVAVSRIKDAERSQ--------------EPTEQLSWAGNEMASILREGDPVQIEPPIA 453
+A +++ + + +R Q E + + A + +AS+L++ +Q A
Sbjct: 326 -HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQ----EA 380
Query: 454 WAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKAD 513
+ + A A+ N L +M++ G A +C A++ +
Sbjct: 381 LMHYKEAIRISPTFADAYSNMGNTLKEMQDVQG---------------ALQCYTRAIQIN 425
Query: 514 PKAAHIWANLANAYYLTGDHRSSGKCLEKV 543
P A +NLA+ H+ SG E +
Sbjct: 426 PAFADAHSNLASI------HKDSGNIPEAI 449
>gi|403305181|ref|XP_003943148.1| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit isoform
1 [Saimiri boliviensis boliviensis]
Length = 1046
Score = 46.2 bits (108), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 62/155 (40%), Gaps = 21/155 (13%)
Query: 251 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 310
++ LG + + G+LQ +I L + P+ D NL A +GDME + + +
Sbjct: 92 YSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAY----- 146
Query: 311 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 370
+ + Y L C + G L + AK C L A++ P
Sbjct: 147 ------VSALQYNPDLYC----------VRSDLGNLLKALGRLEEAKACYLKAIETQPNF 190
Query: 371 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 405
A W+NL + G+ + EKA L+PN +
Sbjct: 191 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL 225
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 129/330 (39%), Gaps = 67/330 (20%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
LEE + +++++ AV W+ LG + G + +I + +DPN D
Sbjct: 172 RLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLD----- 226
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL- 347
AY G++ + A+ F + AA + AL L +V+ G AC+
Sbjct: 227 --AYINLGNVLKEARIFDRAV-------AAYLR--ALSLSPNHAVV------HGNLACVY 269
Query: 348 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 407
+ +++A + A++ P + NLANA G + C A +L P
Sbjct: 270 YEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPT---- 325
Query: 408 RYAVAVSRIKDAERSQ--------------EPTEQLSWAGNEMASILREGDPVQIEPPIA 453
+A +++ + + +R Q E + + A + +AS+L++ +Q A
Sbjct: 326 -HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQ----EA 380
Query: 454 WAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKAD 513
+ + A A+ N L +M++ G A +C A++ +
Sbjct: 381 LMHYKEAIRISPTFADAYSNMGNTLKEMQDVQG---------------ALQCYTRAIQIN 425
Query: 514 PKAAHIWANLANAYYLTGDHRSSGKCLEKV 543
P A +NLA+ H+ SG E +
Sbjct: 426 PAFADAHSNLASI------HKDSGNIPEAI 449
>gi|158337072|ref|YP_001518247.1| hypothetical protein AM1_3945 [Acaryochloris marina MBIC11017]
gi|158307313|gb|ABW28930.1| TPR domain protein [Acaryochloris marina MBIC11017]
Length = 594
Score = 46.2 bits (108), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 73/174 (41%), Gaps = 23/174 (13%)
Query: 148 HVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHH 207
V + PK+A A+F G+ Y ++G A++ Y KA ++ + A + L+ L Q
Sbjct: 355 QVIKFQPKSALAYFNRGVAYSKVGDNATALADYSKALQLDPKYAAALYNRGLVQLNQ--- 411
Query: 208 AQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSS 267
NS D ++ S+Q DT+ A + G LK+G +++
Sbjct: 412 ----------GNSQD----------AIADFTASIQMDTKYAAAYKNRGTAHLKAGNTEAA 451
Query: 268 ISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALIN 321
I+ + + + + N GIA+ +G E + + ++ D AA N
Sbjct: 452 IADFTQAITFNAEDTLAYYNRGIAHSTAGQNEAAIADYSQVLKLDPKFAAAYTN 505
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 66/169 (39%), Gaps = 21/169 (12%)
Query: 234 LSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYF 293
L+ +++Q D + A GL+ L G Q +I+ ++ + +D N G A+
Sbjct: 384 LADYSKALQLDPKYAAALYNRGLVQLNQGNSQDAIADFTASIQMDTKYAAAYKNRGTAHL 443
Query: 294 QSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAV 353
++G+ E + F I + A L Y +A + A E A D +
Sbjct: 444 KAGNTEAAIADFTQAITFN----------AEDTLAYYNRGIAHSTAGQNEAAIADYSQV- 492
Query: 354 NVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 402
LK DPK A + N N + GD ++ K +A + P
Sbjct: 493 ----------LKLDPKFAAAYTNRGNLHAAQGDRDAALKDYSQAIEANP 531
>gi|148682190|gb|EDL14137.1| O-linked N-acetylglucosamine (GlcNAc) transferase
(UDP-N-acetylglucosamine:polypeptide-N-
acetylglucosaminyl transferase), isoform CRA_a [Mus
musculus]
Length = 1036
Score = 46.2 bits (108), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 62/155 (40%), Gaps = 21/155 (13%)
Query: 251 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 310
++ LG + + G+LQ +I L + P+ D NL A +GDME + + +
Sbjct: 82 YSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAY----- 136
Query: 311 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 370
+ + Y L C + G L + AK C L A++ P
Sbjct: 137 ------VSALQYNPDLYC----------VRSDLGNLLKALGRLEEAKACYLKAIETQPNF 180
Query: 371 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 405
A W+NL + G+ + EKA L+PN +
Sbjct: 181 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL 215
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 129/330 (39%), Gaps = 67/330 (20%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
LEE + +++++ AV W+ LG + G + +I + +DPN D
Sbjct: 162 RLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLD----- 216
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL- 347
AY G++ + A+ F + AA + AL L +V+ G AC+
Sbjct: 217 --AYINLGNVLKEARIFDRAV-------AAYLR--ALSLSPNHAVV------HGNLACVY 259
Query: 348 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 407
+ +++A + A++ P + NLANA G + C A +L P
Sbjct: 260 YEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPT---- 315
Query: 408 RYAVAVSRIKDAERSQ--------------EPTEQLSWAGNEMASILREGDPVQIEPPIA 453
+A +++ + + +R Q E + + A + +AS+L++ +Q A
Sbjct: 316 -HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQ----EA 370
Query: 454 WAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKAD 513
+ + A A+ N L +M++ G A +C A++ +
Sbjct: 371 LMHYKEAIRISPTFADAYSNMGNTLKEMQDVQG---------------ALQCYTRAIQIN 415
Query: 514 PKAAHIWANLANAYYLTGDHRSSGKCLEKV 543
P A +NLA+ H+ SG E +
Sbjct: 416 PAFADAHSNLASI------HKDSGNIPEAI 439
>gi|148230096|ref|NP_001087833.1| O-linked N-acetylglucosamine (GlcNAc) transferase [Xenopus laevis]
gi|51949982|gb|AAH82353.1| Ogt-prov protein [Xenopus laevis]
Length = 1063
Score = 46.2 bits (108), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 62/155 (40%), Gaps = 21/155 (13%)
Query: 251 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 310
++ LG + + G+LQ +I L + P+ D NL A +GDME + + +
Sbjct: 92 YSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAY----- 146
Query: 311 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 370
+ + Y L C + G L + AK C L A++ P
Sbjct: 147 ------VSALQYNPDLYC----------VRSDLGNLLKALGRLEEAKACYLKAIETQPNF 190
Query: 371 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 405
A W+NL + G+ + EKA L+PN +
Sbjct: 191 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL 225
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 130/330 (39%), Gaps = 67/330 (20%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
LEE + +++++ AV W+ LG + G + +I + +DPN D
Sbjct: 172 RLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLD----- 226
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL- 347
AY G++ + A+ F + AA + AL L +V+ G AC+
Sbjct: 227 --AYINLGNVLKEARIFDRAV-------AAYLR--ALSLSPNHAVV------HGNLACVY 269
Query: 348 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 407
+ +++A + A++ P + NLANA G + +C A +L P
Sbjct: 270 YEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVVDAEECYNTALRLCPT---- 325
Query: 408 RYAVAVSRIKDAERSQ--------------EPTEQLSWAGNEMASILREGDPVQIEPPIA 453
+A +++ + + +R Q E + + A + +AS+L++ +Q A
Sbjct: 326 -HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQ----EA 380
Query: 454 WAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKAD 513
+ + A A+ N L +M++ G A +C A++ +
Sbjct: 381 LMHYKEAIRISPTFADAYSNMGNTLKEMQDVQG---------------ALQCYTRAIQIN 425
Query: 514 PKAAHIWANLANAYYLTGDHRSSGKCLEKV 543
P A +NLA+ H+ SG E +
Sbjct: 426 PAFADAHSNLASI------HKDSGNIPEAI 449
>gi|89886173|ref|NP_001034837.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
110 kDa subunit [Sus scrofa]
gi|122142735|sp|Q27HV0.1|OGT1_PIG RecName: Full=UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit;
AltName: Full=O-GlcNAc transferase subunit p110;
AltName: Full=O-linked N-acetylglucosamine transferase
110 kDa subunit; Short=OGT
gi|89114276|gb|ABD61726.1| O-linked N-acetylglucosamine transferase [Sus scrofa]
Length = 1046
Score = 46.2 bits (108), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 62/155 (40%), Gaps = 21/155 (13%)
Query: 251 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 310
++ LG + + G+LQ +I L + P+ D NL A +GDME + + +
Sbjct: 92 YSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAY----- 146
Query: 311 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 370
+ + Y L C + G L + AK C L A++ P
Sbjct: 147 ------VSALQYNPDLYC----------VRSDLGNLLKALGRLEEAKACYLKAIETQPNF 190
Query: 371 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 405
A W+NL + G+ + EKA L+PN +
Sbjct: 191 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL 225
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 129/330 (39%), Gaps = 67/330 (20%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
LEE + +++++ AV W+ LG + G + +I + +DPN D
Sbjct: 172 RLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLD----- 226
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL- 347
AY G++ + A+ F + AA + AL L +V+ G AC+
Sbjct: 227 --AYINLGNVLKEARIFDRAV-------AAYLR--ALSLSPNHAVV------HGNLACVY 269
Query: 348 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 407
+ +++A + A++ P + NLANA G + C A +L P
Sbjct: 270 YEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPT---- 325
Query: 408 RYAVAVSRIKDAERSQ--------------EPTEQLSWAGNEMASILREGDPVQIEPPIA 453
+A +++ + + +R Q E + + A + +AS+L++ +Q A
Sbjct: 326 -HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQ----EA 380
Query: 454 WAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKAD 513
+ + A A+ N L +M++ G A +C A++ +
Sbjct: 381 LMHYKEAIRISPTFADAYSNMGNTLKEMQDVQG---------------ALQCYTRAIQIN 425
Query: 514 PKAAHIWANLANAYYLTGDHRSSGKCLEKV 543
P A +NLA+ H+ SG E +
Sbjct: 426 PAFADAHSNLASI------HKDSGNIPEAI 449
>gi|344282022|ref|XP_003412774.1| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit isoform
1 [Loxodonta africana]
Length = 1046
Score = 46.2 bits (108), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 62/155 (40%), Gaps = 21/155 (13%)
Query: 251 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 310
++ LG + + G+LQ +I L + P+ D NL A +GDME + + +
Sbjct: 92 YSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAY----- 146
Query: 311 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 370
+ + Y L C + G L + AK C L A++ P
Sbjct: 147 ------VSALQYNPDLYC----------VRSDLGNLLKALGRLEEAKACYLKAIETQPNF 190
Query: 371 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 405
A W+NL + G+ + EKA L+PN +
Sbjct: 191 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL 225
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 129/330 (39%), Gaps = 67/330 (20%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
LEE + +++++ AV W+ LG + G + +I + +DPN D
Sbjct: 172 RLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLD----- 226
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL- 347
AY G++ + A+ F + AA + AL L +V+ G AC+
Sbjct: 227 --AYINLGNVLKEARIFDRAV-------AAYLR--ALSLSPNHAVV------HGNLACVY 269
Query: 348 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 407
+ +++A + A++ P + NLANA G + C A +L P
Sbjct: 270 YEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPT---- 325
Query: 408 RYAVAVSRIKDAERSQ--------------EPTEQLSWAGNEMASILREGDPVQIEPPIA 453
+A +++ + + +R Q E + + A + +AS+L++ +Q A
Sbjct: 326 -HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQ----EA 380
Query: 454 WAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKAD 513
+ + A A+ N L +M++ G A +C A++ +
Sbjct: 381 LMHYKEAIRISPTFADAYSNMGNTLKEMQDVQG---------------ALQCYTRAIQIN 425
Query: 514 PKAAHIWANLANAYYLTGDHRSSGKCLEKV 543
P A +NLA+ H+ SG E +
Sbjct: 426 PAFADAHSNLASI------HKDSGNIPEAI 449
>gi|332707691|ref|ZP_08427719.1| hypothetical protein LYNGBM3L_54490 [Moorea producens 3L]
gi|332353600|gb|EGJ33112.1| hypothetical protein LYNGBM3L_54490 [Moorea producens 3L]
Length = 463
Score = 46.2 bits (108), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 36/170 (21%), Positives = 65/170 (38%), Gaps = 21/170 (12%)
Query: 251 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 310
+ LG+ K G S+I+ L+ +P + D NLG+A G+ E++ + +Q I
Sbjct: 118 YYNLGIAFYKEGAPDSAIAAYRQALSFNPESADIYYNLGLALESQGNQEEAIEHYQATIR 177
Query: 311 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 370
D ++ A N G L + + A L A++ PK
Sbjct: 178 LDPDYGKAYYNM---------------------GLILVEQDQIGPATTALRQAVRTQPKL 216
Query: 371 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAE 420
L G+ ++ + +A K++P +Y +AV + E
Sbjct: 217 VKAHYQLGLLLVEQGEKSAAEESFREAVKVDPKLAPAQYQLAVILFEKGE 266
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 69/171 (40%), Gaps = 23/171 (13%)
Query: 136 EEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIA 195
++++ T L R PK AH+ LGL+ G+ A S+ +A ++ + +A
Sbjct: 196 QDQIGPATTALRQAVRTQPKLVKAHYQLGLLLVEQGEKSAAEESFREA----VKVDPKLA 251
Query: 196 RPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLG 255
P L I + L E+ L ELEPE ++ + LG
Sbjct: 252 -PAQYQLAVILFEKGELAEAITRFRLVTELEPENVD------------------AYRQLG 292
Query: 256 LILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQ 306
L +G +++ L + +DP + NLG+A Q E++ +Q
Sbjct: 293 AALTANGEYAEAVTTLKLAVQLDPYHALTHYNLGVALQQQEQYEEAMAEYQ 343
>gi|327287040|ref|XP_003228237.1| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit-like
isoform 3 [Anolis carolinensis]
Length = 1046
Score = 46.2 bits (108), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 62/155 (40%), Gaps = 21/155 (13%)
Query: 251 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 310
++ LG + + G+LQ +I L + P+ D NL A +GDME + + +
Sbjct: 92 YSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAY----- 146
Query: 311 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 370
+ + Y L C + G L + AK C L A++ P
Sbjct: 147 ------VSALQYNPDLYC----------VRSDLGNLLKALGRLEEAKACYLKAIETQPNF 190
Query: 371 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 405
A W+NL + G+ + EKA L+PN +
Sbjct: 191 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL 225
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 130/330 (39%), Gaps = 67/330 (20%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
LEE + +++++ AV W+ LG + G + +I + +DPN D
Sbjct: 172 RLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLD----- 226
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL- 347
AY G++ + A+ F + AA + AL L +V+ G AC+
Sbjct: 227 --AYINLGNVLKEARIFDRAV-------AAYLR--ALSLSPNHAVV------HGNLACVY 269
Query: 348 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 407
+ +++A + A++ P + NLANA G + +C A +L P
Sbjct: 270 YEQGLIDLAIDTYKRAIELQPHFPDAYCNLANALKEKGSVAEAEECYNTALRLCPT---- 325
Query: 408 RYAVAVSRIKDAERSQ--------------EPTEQLSWAGNEMASILREGDPVQIEPPIA 453
+A +++ + + +R Q E + + A + +AS+L++ +Q A
Sbjct: 326 -HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQ----EA 380
Query: 454 WAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKAD 513
+ + A A+ N L +M++ G A +C A++ +
Sbjct: 381 LMHYKEAIRISPTFADAYSNMGNTLKEMQDVQG---------------ALQCYTRAIQIN 425
Query: 514 PKAAHIWANLANAYYLTGDHRSSGKCLEKV 543
P A +NLA+ H+ SG E +
Sbjct: 426 PAFADAHSNLASI------HKDSGNIPEAI 449
>gi|297183434|gb|ADI19566.1| FOG: tpr repeat-protein [uncultured Acidobacteria bacterium
HF0770_27F21]
Length = 333
Score = 46.2 bits (108), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 70/169 (41%), Gaps = 12/169 (7%)
Query: 234 LSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYF 293
++K +E M ++ V +G +G ++ + LLA +P+N N+G +
Sbjct: 158 VAKYEEFMVANPHLDAVHGNIGNAYRDAGDVEKAREAYEKLLAAEPDNVMANYNMGEMFV 217
Query: 294 QSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAV 353
++GDME++ F+ ++ ++ + PA N A L + VL CL+
Sbjct: 218 EAGDMEEALPYFESVLQQNPDDPAVYYNVAELYFSQ--QVL----------GCLEPVPEC 265
Query: 354 NVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 402
A AL+ DP + A GD ++ EK +L P
Sbjct: 266 QGAISYYNRALETDPNYLPAHMQIGFALVRLGDIDNAVLAFEKYVELAP 314
>gi|281337757|gb|EFB13341.1| hypothetical protein PANDA_021118 [Ailuropoda melanoleuca]
Length = 1037
Score = 46.2 bits (108), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 62/155 (40%), Gaps = 21/155 (13%)
Query: 251 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 310
++ LG + + G+LQ +I L + P+ D NL A +GDME + + +
Sbjct: 83 YSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAY----- 137
Query: 311 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 370
+ + Y L C + G L + AK C L A++ P
Sbjct: 138 ------VSALQYNPDLYC----------VRSDLGNLLKALGRLEEAKACYLKAIETQPNF 181
Query: 371 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 405
A W+NL + G+ + EKA L+PN +
Sbjct: 182 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL 216
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 129/330 (39%), Gaps = 67/330 (20%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
LEE + +++++ AV W+ LG + G + +I + +DPN D
Sbjct: 163 RLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLD----- 217
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL- 347
AY G++ + A+ F + AA + AL L +V+ G AC+
Sbjct: 218 --AYINLGNVLKEARIFDRAV-------AAYLR--ALSLSPNHAVV------HGNLACVY 260
Query: 348 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 407
+ +++A + A++ P + NLANA G + C A +L P
Sbjct: 261 YEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPT---- 316
Query: 408 RYAVAVSRIKDAERSQ--------------EPTEQLSWAGNEMASILREGDPVQIEPPIA 453
+A +++ + + +R Q E + + A + +AS+L++ +Q A
Sbjct: 317 -HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQ----EA 371
Query: 454 WAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKAD 513
+ + A A+ N L +M++ G A +C A++ +
Sbjct: 372 LMHYKEAIRISPTFADAYSNMGNTLKEMQDVQG---------------ALQCYTRAIQIN 416
Query: 514 PKAAHIWANLANAYYLTGDHRSSGKCLEKV 543
P A +NLA+ H+ SG E +
Sbjct: 417 PAFADAHSNLASI------HKDSGNIPEAI 440
>gi|395825639|ref|XP_003786032.1| PREDICTED: tetratricopeptide repeat protein 37 [Otolemur garnettii]
Length = 1564
Score = 46.2 bits (108), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 88/212 (41%), Gaps = 15/212 (7%)
Query: 216 SGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTL--GLILLKSGRLQSSISVLSS 273
SG ++D +E E++E L+ L Q + W L GL LK+G+ +++ L +
Sbjct: 530 SGGAAVDLSVELEDMETALAILTTVTQKASAGTAKWAWLRRGLYYLKAGQPSQAVADLQA 589
Query: 274 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAAL--LLCKYG 331
L DP + +C +LG AY G + K F + ++ AA+ +L KY
Sbjct: 590 ALRADPKDSNCWESLGEAYLSRGGYTTALKSFTKASELNPESTYSVFKVAAIQQVLGKYK 649
Query: 332 SVLAGAGANTGEGACLDQASAVNVAKECLLAALKA------DPKAAHIWANLANAYYLTG 385
+A + D A+ EC L KA D KA +
Sbjct: 650 EAVAQYQLIIKKTE--DYVPALKGLGECHLMMAKAALVDYLDGKAVDYIEKALEYFTWAL 707
Query: 386 DHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIK 417
HR+ CL KL + ++ YAV+ S++K
Sbjct: 708 QHRADVSCL---WKLVGDACTSLYAVSPSKVK 736
>gi|301791309|ref|XP_002930623.1| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit-like
isoform 2 [Ailuropoda melanoleuca]
gi|410988810|ref|XP_004000670.1| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit isoform
1 [Felis catus]
gi|355708635|gb|AES03331.1| O-linked N-acetylglucosamine transferase [Mustela putorius furo]
Length = 1046
Score = 46.2 bits (108), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 62/155 (40%), Gaps = 21/155 (13%)
Query: 251 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 310
++ LG + + G+LQ +I L + P+ D NL A +GDME + + +
Sbjct: 92 YSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAY----- 146
Query: 311 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 370
+ + Y L C + G L + AK C L A++ P
Sbjct: 147 ------VSALQYNPDLYC----------VRSDLGNLLKALGRLEEAKACYLKAIETQPNF 190
Query: 371 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 405
A W+NL + G+ + EKA L+PN +
Sbjct: 191 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL 225
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 129/330 (39%), Gaps = 67/330 (20%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
LEE + +++++ AV W+ LG + G + +I + +DPN D
Sbjct: 172 RLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLD----- 226
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL- 347
AY G++ + A+ F + AA + AL L +V+ G AC+
Sbjct: 227 --AYINLGNVLKEARIFDRAV-------AAYLR--ALSLSPNHAVV------HGNLACVY 269
Query: 348 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 407
+ +++A + A++ P + NLANA G + C A +L P
Sbjct: 270 YEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPT---- 325
Query: 408 RYAVAVSRIKDAERSQ--------------EPTEQLSWAGNEMASILREGDPVQIEPPIA 453
+A +++ + + +R Q E + + A + +AS+L++ +Q A
Sbjct: 326 -HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQ----EA 380
Query: 454 WAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKAD 513
+ + A A+ N L +M++ G A +C A++ +
Sbjct: 381 LMHYKEAIRISPTFADAYSNMGNTLKEMQDVQG---------------ALQCYTRAIQIN 425
Query: 514 PKAAHIWANLANAYYLTGDHRSSGKCLEKV 543
P A +NLA+ H+ SG E +
Sbjct: 426 PAFADAHSNLASI------HKDSGNIPEAI 449
>gi|449267896|gb|EMC78787.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
110 kDa subunit, partial [Columba livia]
Length = 1036
Score = 46.2 bits (108), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 62/155 (40%), Gaps = 21/155 (13%)
Query: 251 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 310
++ LG + + G+LQ +I L + P+ D NL A +GDME + + +
Sbjct: 83 YSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAY----- 137
Query: 311 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 370
+ + Y L C + G L + AK C L A++ P
Sbjct: 138 ------VSALQYNPDLYC----------VRSDLGNLLKALGRLEEAKACYLKAIETQPNF 181
Query: 371 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 405
A W+NL + G+ + EKA L+PN +
Sbjct: 182 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL 216
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 130/330 (39%), Gaps = 67/330 (20%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
LEE + +++++ AV W+ LG + G + +I + +DPN D
Sbjct: 163 RLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLD----- 217
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL- 347
AY G++ + A+ F + AA + AL L +V+ G AC+
Sbjct: 218 --AYINLGNVLKEARIFDRAV-------AAYLR--ALSLSPNHAVV------HGNLACVY 260
Query: 348 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 407
+ +++A + A++ P + NLANA G + +C A +L P
Sbjct: 261 YEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVVEAEECYNTALRLCPT---- 316
Query: 408 RYAVAVSRIKDAERSQ--------------EPTEQLSWAGNEMASILREGDPVQIEPPIA 453
+A +++ + + +R Q E + + A + +AS+L++ +Q A
Sbjct: 317 -HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQ----EA 371
Query: 454 WAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKAD 513
+ + A A+ N L +M++ G A +C A++ +
Sbjct: 372 LMHYKEAIRISPTFADAYSNMGNTLKEMQDVQG---------------ALQCYTRAIQIN 416
Query: 514 PKAAHIWANLANAYYLTGDHRSSGKCLEKV 543
P A +NLA+ H+ SG E +
Sbjct: 417 PAFADAHSNLASI------HKDSGNIPEAI 440
>gi|66347871|ref|NP_001018116.1| O-linked N-acetylglucosamine transferase isoform 3 [Danio rerio]
gi|56967376|gb|AAW31872.1| O-GlcNAc transferase variant 3 [Danio rerio]
Length = 1046
Score = 46.2 bits (108), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 62/155 (40%), Gaps = 21/155 (13%)
Query: 251 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 310
++ LG + + G+LQ +I L + P+ D NL A +GDME + + +
Sbjct: 92 YSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAY----- 146
Query: 311 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 370
+ + Y L C + G L + AK C L A++ P
Sbjct: 147 ------VSALQYNPDLYC----------VRSDLGNLLKALGRLEEAKACYLKAIETQPNF 190
Query: 371 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 405
A W+NL + G+ + EKA L+PN +
Sbjct: 191 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL 225
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 88/422 (20%), Positives = 161/422 (38%), Gaps = 84/422 (19%)
Query: 151 RKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQC 210
++ P A A+ LG +Y+ GQ +A+ Y A LR + D I+ A
Sbjct: 83 KQNPMLAEAYSNLGNVYKERGQLQEAIEHYRHA----LRLKPDFIDG------YINLAAA 132
Query: 211 LLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISV 270
L+ ++GD +E + ++Q + V + LG +L GRL+ + +
Sbjct: 133 LV--AAGD-----------MEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKAC 179
Query: 271 LSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKY 330
+ PN NLG + G++ + F+ + D N A IN +L K
Sbjct: 180 YLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVL--KE 237
Query: 331 GSVLAGAGANT--------------GEGACL-DQASAVNVAKECLLAALKADPKAAHIWA 375
+ A A G AC+ + +++A + A++ P +
Sbjct: 238 ARIFDRAVAGYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYC 297
Query: 376 NLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQ------------ 423
NLANA G+ + +C A +L P +A +++ + + +R Q
Sbjct: 298 NLANALKEKGNVSEAEECYNTALRLCPT-----HADSLNNLANIKREQGNIEEAVQLYRK 352
Query: 424 --EPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFAAVQKTHHEVAAAFETEENELSKM 481
E + + A + +AS+L++ +Q A + + A A+ N L +M
Sbjct: 353 ALEVFPEFAAAHSNLASVLQQQGKLQ----EALMHYKEAIRISPTFADAYSNMGNTLKEM 408
Query: 482 EECAGAGESAFLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLE 541
++ G A +C A++ +P A +NLA+ H+ SG E
Sbjct: 409 QDVQG---------------ALQCYTRAIQINPAFADAHSNLASI------HKDSGNIPE 447
Query: 542 KV 543
+
Sbjct: 448 AI 449
>gi|326433006|gb|EGD78576.1| mbre TPR repeat protein [Salpingoeca sp. ATCC 50818]
Length = 828
Score = 46.2 bits (108), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 71/180 (39%), Gaps = 22/180 (12%)
Query: 160 HFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESSGDN 219
H LG+ +R G KA+ Y+KA L ++ + + + H+ L GD
Sbjct: 318 HNNLGIACRRKGAYDKAIQHYKKA----LAIRVEVLGEKHPTTAETHNNLGELHRHKGDY 373
Query: 220 SLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAV-- 277
E E + L + D+ + + LG+ L G +I + LA+
Sbjct: 374 DSAIECYSRANEVFVETLGDK---DSNTGMTYGNLGIAYLSKGEYDKAIEFIEKALAIMV 430
Query: 278 ------DPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLI------LKDQNHPAALINYAAL 325
PN +GNLGIAY + GD +++ F+ + D+ HPA Y L
Sbjct: 431 EILGDKHPNTAMTLGNLGIAYLEKGDHDKATDQFEKALAIYLEAFGDK-HPATADTYTNL 489
>gi|257093693|ref|YP_003167334.1| type IV pilus biogenesis/stability protein PilW [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
gi|257046217|gb|ACV35405.1| type IV pilus biogenesis/stability protein PilW [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
Length = 267
Score = 46.2 bits (108), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 80/202 (39%), Gaps = 18/202 (8%)
Query: 231 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 290
+E+ S+ + +A + LG + L+SG L ++ L + +DP+ G +
Sbjct: 33 DEVDSRRPTPPRDARTRAKLHTELGSLYLQSGNLAVALQELLIAIDIDPDYGKAYGTRAL 92
Query: 291 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAG------------ 338
A+F ++E + + FQ + D+N P NY LC+ G G
Sbjct: 93 AHFGIRELELADRDFQRALSIDRNDPDISNNY-GWFLCQIGRGKEGITYLQRALKDPLYE 151
Query: 339 ----ANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCL 394
A G C ++ A+ + +L+ P LAN YY GD + + + L
Sbjct: 152 TPERAYLNAGGCYATLGDLDRAETFVQQSLRLAPGNPQAELQLANIYYRRGDLQLANEQL 211
Query: 395 EK-AAKLEPNCMSTRYAVAVSR 415
K EPN + V V R
Sbjct: 212 ASLVRKTEPNAEALWLMVRVER 233
>gi|149758509|ref|XP_001493422.1| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit isoform
1 [Equus caballus]
gi|291407677|ref|XP_002720149.1| PREDICTED: O-linked GlcNAc transferase isoform 2 [Oryctolagus
cuniculus]
gi|296235743|ref|XP_002763023.1| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit isoform
1 [Callithrix jacchus]
gi|348570518|ref|XP_003471044.1| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit-like
isoform 2 [Cavia porcellus]
gi|402910496|ref|XP_003917911.1| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit isoform
1 [Papio anubis]
gi|426257214|ref|XP_004022227.1| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit isoform
2 [Ovis aries]
gi|378405191|sp|P81436.2|OGT1_RABIT RecName: Full=UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit;
AltName: Full=O-GlcNAc transferase subunit p110;
AltName: Full=O-linked N-acetylglucosamine transferase
110 kDa subunit; Short=OGT
gi|355757457|gb|EHH60982.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
110 kDa subunit [Macaca fascicularis]
gi|380817296|gb|AFE80522.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
110 kDa subunit isoform 1 [Macaca mulatta]
gi|383422239|gb|AFH34333.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
110 kDa subunit isoform 1 [Macaca mulatta]
gi|384949880|gb|AFI38545.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
110 kDa subunit isoform 1 [Macaca mulatta]
Length = 1046
Score = 46.2 bits (108), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 62/155 (40%), Gaps = 21/155 (13%)
Query: 251 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 310
++ LG + + G+LQ +I L + P+ D NL A +GDME + + +
Sbjct: 92 YSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAY----- 146
Query: 311 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 370
+ + Y L C + G L + AK C L A++ P
Sbjct: 147 ------VSALQYNPDLYC----------VRSDLGNLLKALGRLEEAKACYLKAIETQPNF 190
Query: 371 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 405
A W+NL + G+ + EKA L+PN +
Sbjct: 191 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL 225
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 129/330 (39%), Gaps = 67/330 (20%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
LEE + +++++ AV W+ LG + G + +I + +DPN D
Sbjct: 172 RLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLD----- 226
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL- 347
AY G++ + A+ F + AA + AL L +V+ G AC+
Sbjct: 227 --AYINLGNVLKEARIFDRAV-------AAYLR--ALSLSPNHAVV------HGNLACVY 269
Query: 348 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 407
+ +++A + A++ P + NLANA G + C A +L P
Sbjct: 270 YEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPT---- 325
Query: 408 RYAVAVSRIKDAERSQ--------------EPTEQLSWAGNEMASILREGDPVQIEPPIA 453
+A +++ + + +R Q E + + A + +AS+L++ +Q A
Sbjct: 326 -HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQ----EA 380
Query: 454 WAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKAD 513
+ + A A+ N L +M++ G A +C A++ +
Sbjct: 381 LMHYKEAIRISPTFADAYSNMGNTLKEMQDVQG---------------ALQCYTRAIQIN 425
Query: 514 PKAAHIWANLANAYYLTGDHRSSGKCLEKV 543
P A +NLA+ H+ SG E +
Sbjct: 426 PAFADAHSNLASI------HKDSGNIPEAI 449
>gi|149042178|gb|EDL95885.1| O-linked N-acetylglucosamine (GlcNAc) transferase
(UDP-N-acetylglucosamine:polypeptide-N-
acetylglucosaminyl transferase), isoform CRA_a [Rattus
norvegicus]
gi|149042179|gb|EDL95886.1| O-linked N-acetylglucosamine (GlcNAc) transferase
(UDP-N-acetylglucosamine:polypeptide-N-
acetylglucosaminyl transferase), isoform CRA_a [Rattus
norvegicus]
Length = 1046
Score = 46.2 bits (108), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 62/155 (40%), Gaps = 21/155 (13%)
Query: 251 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 310
++ LG + + G+LQ +I L + P+ D NL A +GDME + + +
Sbjct: 92 YSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAY----- 146
Query: 311 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 370
+ + Y L C + G L + AK C L A++ P
Sbjct: 147 ------VSALQYNPDLYC----------VRSDLGNLLKALGRLEEAKACYLKAIETQPNF 190
Query: 371 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 405
A W+NL + G+ + EKA L+PN +
Sbjct: 191 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL 225
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 129/330 (39%), Gaps = 67/330 (20%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
LEE + +++++ AV W+ LG + G + +I + +DPN D
Sbjct: 172 RLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLD----- 226
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL- 347
AY G++ + A+ F + AA + AL L +V+ G AC+
Sbjct: 227 --AYINLGNVLKEARIFDRAV-------AAYLR--ALSLSPNHAVV------HGNLACVY 269
Query: 348 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 407
+ +++A + A++ P + NLANA G + C A +L P
Sbjct: 270 YEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPT---- 325
Query: 408 RYAVAVSRIKDAERSQ--------------EPTEQLSWAGNEMASILREGDPVQIEPPIA 453
+A +++ + + +R Q E + + A + +AS+L++ +Q A
Sbjct: 326 -HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQ----EA 380
Query: 454 WAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKAD 513
+ + A A+ N L +M++ G A +C A++ +
Sbjct: 381 LMHYKEAIRISPTFADAYSNMGNTLKEMQDVQG---------------ALQCYTRAIQIN 425
Query: 514 PKAAHIWANLANAYYLTGDHRSSGKCLEKV 543
P A +NLA+ H+ SG E +
Sbjct: 426 PAFADAHSNLASI------HKDSGNIPEAI 449
>gi|427722160|ref|YP_007069437.1| glycosyl transferase family protein [Leptolyngbya sp. PCC 7376]
gi|427353880|gb|AFY36603.1| glycosyl transferase family 9 [Leptolyngbya sp. PCC 7376]
Length = 2322
Score = 46.2 bits (108), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 240 SMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDME 299
+++ + R A N LG LL + + +I+ +LA+DPN D ++G+ + GD +
Sbjct: 162 ALKLEPRNANFHNNLGHALLGLDQYEQAIATFKKVLAIDPNRLDAKIHVGMVLHEKGDYK 221
Query: 300 QSAKCFQDLILKDQNHPAALINYAALLLCKYG 331
+ + ++ ++ HP L NYA +L +YG
Sbjct: 222 DAIQHYKKILETHPRHPGLLNNYAN-VLKEYG 252
>gi|62821820|ref|NP_001017359.1| O-linked N-acetylglucosamine transferase isoform 1 [Danio rerio]
gi|56967372|gb|AAW31870.1| O-GlcNAc transferase variant 1 [Danio rerio]
Length = 1062
Score = 46.2 bits (108), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 62/155 (40%), Gaps = 21/155 (13%)
Query: 251 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 310
++ LG + + G+LQ +I L + P+ D NL A +GDME + + +
Sbjct: 92 YSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAY----- 146
Query: 311 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 370
+ + Y L C + G L + AK C L A++ P
Sbjct: 147 ------VSALQYNPDLYC----------VRSDLGNLLKALGRLEEAKACYLKAIETQPNF 190
Query: 371 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 405
A W+NL + G+ + EKA L+PN +
Sbjct: 191 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL 225
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 88/422 (20%), Positives = 161/422 (38%), Gaps = 84/422 (19%)
Query: 151 RKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQC 210
++ P A A+ LG +Y+ GQ +A+ Y A LR + D I+ A
Sbjct: 83 KQNPMLAEAYSNLGNVYKERGQLQEAIEHYRHA----LRLKPDFIDG------YINLAAA 132
Query: 211 LLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISV 270
L+ ++GD +E + ++Q + V + LG +L GRL+ + +
Sbjct: 133 LV--AAGD-----------MEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKAC 179
Query: 271 LSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKY 330
+ PN NLG + G++ + F+ + D N A IN +L K
Sbjct: 180 YLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVL--KE 237
Query: 331 GSVLAGAGANT--------------GEGACL-DQASAVNVAKECLLAALKADPKAAHIWA 375
+ A A G AC+ + +++A + A++ P +
Sbjct: 238 ARIFDRAVAGYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYC 297
Query: 376 NLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQ------------ 423
NLANA G+ + +C A +L P +A +++ + + +R Q
Sbjct: 298 NLANALKEKGNVSEAEECYNTALRLCPT-----HADSLNNLANIKREQGNIEEAVQLYRK 352
Query: 424 --EPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFAAVQKTHHEVAAAFETEENELSKM 481
E + + A + +AS+L++ +Q A + + A A+ N L +M
Sbjct: 353 ALEVFPEFAAAHSNLASVLQQQGKLQ----EALMHYKEAIRISPTFADAYSNMGNTLKEM 408
Query: 482 EECAGAGESAFLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLE 541
++ G A +C A++ +P A +NLA+ H+ SG E
Sbjct: 409 QDVQG---------------ALQCYTRAIQINPAFADAHSNLASI------HKDSGNIPE 447
Query: 542 KV 543
+
Sbjct: 448 AI 449
>gi|148678797|gb|EDL10744.1| cDNA sequence BC023818 [Mus musculus]
Length = 569
Score = 46.2 bits (108), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 73/336 (21%), Positives = 134/336 (39%), Gaps = 50/336 (14%)
Query: 228 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 287
E+ EE + LKES++ A +++L +L + R + + + + + P++ D N
Sbjct: 249 EKTEEAIMLLKESIKYGPDFADAYSSLASLLAEQERFKEAEDIYQAGIKNCPDSSDLHNN 308
Query: 288 LGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL 347
+ SG E++ +Q I +H A++N G + G N+
Sbjct: 309 YAVFLVDSGFPEKAVAHYQQAIQLSPSHHVAVVNL--------GRLYRSLGENSK----- 355
Query: 348 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 407
A+E ALK + A + + L YY TG H+ + + +A L+P+
Sbjct: 356 --------AEEWYRRALKV-ARTAEVLSPLGALYYNTGRHKEALEVYREAVSLQPSQREL 406
Query: 408 RYAVA-----VSRIKDAERSQEPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFAAVQK 462
R A+A + + K+AE+ + S + +P +E + +A+
Sbjct: 407 RLALAQVLAVMGQTKEAEK--------------ITSHIVSEEPRCLE---CYRLLSAIHS 449
Query: 463 THHEVAAAFETEENELS-KMEECAGAGESAF-----LDQASAVNVAKECLLAALKADPKA 516
A E E L K ++ E F L + + ++ A E AA+ DP
Sbjct: 450 KQEHHGKALEAIEKALQLKPKDPKVISELFFTKGNQLREQNLLDKAFESYEAAVTLDPDQ 509
Query: 517 AHIWANLANAYYLTGDHRSSGKCLEKVLMVYCSSNL 552
A W N+ ++ G + S+ E+ L + S L
Sbjct: 510 AQAWMNMGGIRHIQGSYVSARAYYERALKLVPDSKL 545
>gi|27804844|gb|AAO22883.1| hypothetical protein [Myxococcus xanthus]
Length = 310
Score = 46.2 bits (108), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 71/156 (45%), Gaps = 20/156 (12%)
Query: 248 AVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQD 307
A +++ L L + GR + ++++L +A P + D + LG A+ + GD+ + +
Sbjct: 113 AALYDALAATLHRQGRGREALTLLRGAVARFPRDEDLLYVLGAAHERQGDVTGALARMRA 172
Query: 308 LILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKAD 367
++ +H AAL N+ G +LA AG N E A+ + AL+
Sbjct: 173 VLAVSPDHAAAL-NF-------LGYLLAQAGQNLDE------------AERRVRRALELR 212
Query: 368 PKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 403
P +L Y+ GD+ + LE+A+ L P+
Sbjct: 213 PDTGAYLDSLGWVYFRRGDYARAVDALERASTLAPD 248
>gi|395858891|ref|XP_003801788.1| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit isoform
2 [Otolemur garnettii]
Length = 1036
Score = 46.2 bits (108), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 62/155 (40%), Gaps = 21/155 (13%)
Query: 251 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 310
++ LG + + G+LQ +I L + P+ D NL A +GDME + + +
Sbjct: 82 YSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAY----- 136
Query: 311 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 370
+ + Y L C + G L + AK C L A++ P
Sbjct: 137 ------VSALQYNPDLYC----------VRSDLGNLLKALGRLEEAKACYLKAIETQPNF 180
Query: 371 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 405
A W+NL + G+ + EKA L+PN +
Sbjct: 181 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL 215
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 129/330 (39%), Gaps = 67/330 (20%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
LEE + +++++ AV W+ LG + G + +I + +DPN D
Sbjct: 162 RLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLD----- 216
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL- 347
AY G++ + A+ F + AA + AL L +V+ G AC+
Sbjct: 217 --AYINLGNVLKEARIFDRAV-------AAYLR--ALSLSPNHAVV------HGNLACVY 259
Query: 348 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 407
+ +++A + A++ P + NLANA G + C A +L P
Sbjct: 260 YEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPT---- 315
Query: 408 RYAVAVSRIKDAERSQ--------------EPTEQLSWAGNEMASILREGDPVQIEPPIA 453
+A +++ + + +R Q E + + A + +AS+L++ +Q A
Sbjct: 316 -HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQ----EA 370
Query: 454 WAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKAD 513
+ + A A+ N L +M++ G A +C A++ +
Sbjct: 371 LMHYKEAIRISPTFADAYSNMGNTLKEMQDVQG---------------ALQCYTRAIQIN 415
Query: 514 PKAAHIWANLANAYYLTGDHRSSGKCLEKV 543
P A +NLA+ H+ SG E +
Sbjct: 416 PAFADAHSNLASI------HKDSGNIPEAI 439
>gi|348516824|ref|XP_003445937.1| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit isoform
2 [Oreochromis niloticus]
Length = 1038
Score = 46.2 bits (108), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 62/155 (40%), Gaps = 21/155 (13%)
Query: 251 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 310
++ LG + + G+LQ +I L + P+ D NL A +GDME + + +
Sbjct: 82 YSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAY----- 136
Query: 311 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 370
+ + Y L C + G L + AK C L A++ P
Sbjct: 137 ------VSALQYNPDLYC----------VRSDLGNLLKALGRLEEAKACYLKAIETQPNF 180
Query: 371 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 405
A W+NL + G+ + EKA L+PN +
Sbjct: 181 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL 215
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 88/422 (20%), Positives = 161/422 (38%), Gaps = 84/422 (19%)
Query: 151 RKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQC 210
++ P A A+ LG +Y+ GQ +A+ Y A LR + D I+ A
Sbjct: 73 KQNPMLAEAYSNLGNVYKERGQLQEAIEHYRHA----LRLKPDFIDG------YINLAAA 122
Query: 211 LLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISV 270
L+ ++GD +E + ++Q + V + LG +L GRL+ + +
Sbjct: 123 LV--AAGD-----------MEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKAC 169
Query: 271 LSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKY 330
+ PN NLG + G++ + F+ + D N A IN +L K
Sbjct: 170 YLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVL--KE 227
Query: 331 GSVLAGAGANT--------------GEGACL-DQASAVNVAKECLLAALKADPKAAHIWA 375
+ A A G AC+ + +++A + A++ P +
Sbjct: 228 ARIFDRAVAGYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYC 287
Query: 376 NLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQ------------ 423
NLANA G+ + +C A +L P +A +++ + + +R Q
Sbjct: 288 NLANALKEKGNVSEAEECYNTALRLCPT-----HADSLNNLANIKREQGYIEEAVQLYRK 342
Query: 424 --EPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFAAVQKTHHEVAAAFETEENELSKM 481
E + + A + +AS+L++ +Q A + + A A+ N L +M
Sbjct: 343 ALEVFPEFAAAHSNLASVLQQQGKLQ----EALMHYKEAIRISPTFADAYSNMGNTLKEM 398
Query: 482 EECAGAGESAFLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLE 541
++ G A +C A++ +P A +NLA+ H+ SG E
Sbjct: 399 QDVQG---------------ALQCYTRAIQINPAFADAHSNLASI------HKDSGNIPE 437
Query: 542 KV 543
+
Sbjct: 438 AI 439
>gi|327287036|ref|XP_003228235.1| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit-like
isoform 1 [Anolis carolinensis]
Length = 1066
Score = 46.2 bits (108), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 62/155 (40%), Gaps = 21/155 (13%)
Query: 251 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 310
++ LG + + G+LQ +I L + P+ D NL A +GDME + + +
Sbjct: 92 YSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAY----- 146
Query: 311 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 370
+ + Y L C + G L + AK C L A++ P
Sbjct: 147 ------VSALQYNPDLYC----------VRSDLGNLLKALGRLEEAKACYLKAIETQPNF 190
Query: 371 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 405
A W+NL + G+ + EKA L+PN +
Sbjct: 191 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL 225
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 130/330 (39%), Gaps = 67/330 (20%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
LEE + +++++ AV W+ LG + G + +I + +DPN D
Sbjct: 172 RLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLD----- 226
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL- 347
AY G++ + A+ F + AA + AL L +V+ G AC+
Sbjct: 227 --AYINLGNVLKEARIFDRAV-------AAYLR--ALSLSPNHAVV------HGNLACVY 269
Query: 348 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 407
+ +++A + A++ P + NLANA G + +C A +L P
Sbjct: 270 YEQGLIDLAIDTYKRAIELQPHFPDAYCNLANALKEKGSVAEAEECYNTALRLCPT---- 325
Query: 408 RYAVAVSRIKDAERSQ--------------EPTEQLSWAGNEMASILREGDPVQIEPPIA 453
+A +++ + + +R Q E + + A + +AS+L++ +Q A
Sbjct: 326 -HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQ----EA 380
Query: 454 WAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKAD 513
+ + A A+ N L +M++ G A +C A++ +
Sbjct: 381 LMHYKEAIRISPTFADAYSNMGNTLKEMQDVQG---------------ALQCYTRAIQIN 425
Query: 514 PKAAHIWANLANAYYLTGDHRSSGKCLEKV 543
P A +NLA+ H+ SG E +
Sbjct: 426 PAFADAHSNLASI------HKDSGNIPEAI 449
>gi|326918804|ref|XP_003205676.1| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit-like,
partial [Meleagris gallopavo]
Length = 1038
Score = 46.2 bits (108), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 62/155 (40%), Gaps = 21/155 (13%)
Query: 251 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 310
++ LG + + G+LQ +I L + P+ D NL A +GDME + + +
Sbjct: 85 YSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAY----- 139
Query: 311 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 370
+ + Y L C + G L + AK C L A++ P
Sbjct: 140 ------VSALQYNPDLYC----------VRSDLGNLLKALGRLEEAKACYLKAIETQPNF 183
Query: 371 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 405
A W+NL + G+ + EKA L+PN +
Sbjct: 184 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL 218
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 130/330 (39%), Gaps = 67/330 (20%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
LEE + +++++ AV W+ LG + G + +I + +DPN D
Sbjct: 165 RLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLD----- 219
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL- 347
AY G++ + A+ F + AA + AL L +V+ G AC+
Sbjct: 220 --AYINLGNVLKEARIFDRAV-------AAYLR--ALSLSPNHAVV------HGNLACVY 262
Query: 348 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 407
+ +++A + A++ P + NLANA G + +C A +L P
Sbjct: 263 YEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEECYNTALRLCPT---- 318
Query: 408 RYAVAVSRIKDAERSQ--------------EPTEQLSWAGNEMASILREGDPVQIEPPIA 453
+A +++ + + +R Q E + + A + +AS+L++ +Q A
Sbjct: 319 -HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQ----EA 373
Query: 454 WAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKAD 513
+ + A A+ N L +M++ G A +C A++ +
Sbjct: 374 LMHYKEAIRISPTFADAYSNMGNTLKEMQDVQG---------------ALQCYTRAIQIN 418
Query: 514 PKAAHIWANLANAYYLTGDHRSSGKCLEKV 543
P A +NLA+ H+ SG E +
Sbjct: 419 PAFADAHSNLASI------HKDSGNIPEAI 442
>gi|302771315|ref|XP_002969076.1| hypothetical protein SELMODRAFT_90520 [Selaginella moellendorffii]
gi|302822390|ref|XP_002992853.1| hypothetical protein SELMODRAFT_136122 [Selaginella moellendorffii]
gi|300139301|gb|EFJ06044.1| hypothetical protein SELMODRAFT_136122 [Selaginella moellendorffii]
gi|300163581|gb|EFJ30192.1| hypothetical protein SELMODRAFT_90520 [Selaginella moellendorffii]
Length = 222
Score = 46.2 bits (108), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 61/135 (45%)
Query: 185 EILLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSD 244
+IL+R E ++A ELL V+ A + G L K+L P + + +K+ +
Sbjct: 67 QILVRRELEMAAKELLERVRTSQATPVEYYELGAVMLRKKLYPVARKYLEQAIKKWEDDE 126
Query: 245 TRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKC 304
A V+N LG +++ +IS + + P NLG +Y + D +++ K
Sbjct: 127 QELAQVYNALGFAYFSENKVEQAISHYEKAVTLSPGYTVAWNNLGSSYEKRKDWKRALKA 186
Query: 305 FQDLILKDQNHPAAL 319
++ + D + AL
Sbjct: 187 YEQTLQFDPRNKVAL 201
>gi|139948535|ref|NP_058803.2| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
110 kDa subunit [Rattus norvegicus]
gi|149042180|gb|EDL95887.1| O-linked N-acetylglucosamine (GlcNAc) transferase
(UDP-N-acetylglucosamine:polypeptide-N-
acetylglucosaminyl transferase), isoform CRA_b [Rattus
norvegicus]
gi|149042181|gb|EDL95888.1| O-linked N-acetylglucosamine (GlcNAc) transferase
(UDP-N-acetylglucosamine:polypeptide-N-
acetylglucosaminyl transferase), isoform CRA_b [Rattus
norvegicus]
Length = 1036
Score = 46.2 bits (108), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 62/155 (40%), Gaps = 21/155 (13%)
Query: 251 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 310
++ LG + + G+LQ +I L + P+ D NL A +GDME + + +
Sbjct: 82 YSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAY----- 136
Query: 311 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 370
+ + Y L C + G L + AK C L A++ P
Sbjct: 137 ------VSALQYNPDLYC----------VRSDLGNLLKALGRLEEAKACYLKAIETQPNF 180
Query: 371 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 405
A W+NL + G+ + EKA L+PN +
Sbjct: 181 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL 215
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 129/330 (39%), Gaps = 67/330 (20%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
LEE + +++++ AV W+ LG + G + +I + +DPN D
Sbjct: 162 RLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLD----- 216
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL- 347
AY G++ + A+ F + AA + AL L +V+ G AC+
Sbjct: 217 --AYINLGNVLKEARIFDRAV-------AAYLR--ALSLSPNHAVV------HGNLACVY 259
Query: 348 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 407
+ +++A + A++ P + NLANA G + C A +L P
Sbjct: 260 YEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPT---- 315
Query: 408 RYAVAVSRIKDAERSQ--------------EPTEQLSWAGNEMASILREGDPVQIEPPIA 453
+A +++ + + +R Q E + + A + +AS+L++ +Q A
Sbjct: 316 -HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQ----EA 370
Query: 454 WAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKAD 513
+ + A A+ N L +M++ G A +C A++ +
Sbjct: 371 LMHYKEAIRISPTFADAYSNMGNTLKEMQDVQG---------------ALQCYTRAIQIN 415
Query: 514 PKAAHIWANLANAYYLTGDHRSSGKCLEKV 543
P A +NLA+ H+ SG E +
Sbjct: 416 PAFADAHSNLASI------HKDSGNIPEAI 439
>gi|40063060|gb|AAR37916.1| TPR domain protein [uncultured marine bacterium 560]
Length = 764
Score = 46.2 bits (108), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 92/254 (36%), Gaps = 46/254 (18%)
Query: 157 AHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESS 216
A AH LG+ Q LGQ AV YE+A I RP+ +
Sbjct: 73 ADAHNNLGVTLQELGQLEAAVKHYEEALAI---------RPDY---------------AE 108
Query: 217 GDNSLDKEL-EPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLL 275
N+ L E +LE + +E++ A N LG+ L + G+L +++ +
Sbjct: 109 AHNNFGVTLQELGQLEAAVKHYEEALAIRPDYAEAHNNLGITLKELGQLDAAVESYKKTI 168
Query: 276 AVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLA 335
+ PN + NLGI + G ++ + K ++ + N
Sbjct: 169 VIKPNFAEAHNNLGITLKELGQLDTAVKSYEKALAIKPNF-------------------- 208
Query: 336 GAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLE 395
A A+ G ++ A + AL P A + NL NA G ++ C E
Sbjct: 209 -AEAHNNLGNVFKDLGQLDTAVKSYEKALAIRPDYAEVHNNLGNALKELGQLDAAFNCYE 267
Query: 396 KAAKLEPNCMSTRY 409
K ++P Y
Sbjct: 268 KTLAIKPEFAEANY 281
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 64/154 (41%), Gaps = 25/154 (16%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 213
P A AH G+ Q LGQ AV YE+A I RP+
Sbjct: 104 PDYAEAHNNFGVTLQELGQLEAAVKHYEEALAI---------RPDY-------------- 140
Query: 214 ESSGDNSLDKEL-EPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLS 272
+ N+L L E +L+ + K+++ A N LG+ L + G+L +++
Sbjct: 141 -AEAHNNLGITLKELGQLDAAVESYKKTIVIKPNFAEAHNNLGITLKELGQLDTAVKSYE 199
Query: 273 SLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQ 306
LA+ PN + NLG + G ++ + K ++
Sbjct: 200 KALAIKPNFAEAHNNLGNVFKDLGQLDTAVKSYE 233
>gi|434384364|ref|YP_007094975.1| cytochrome c biogenesis factor [Chamaesiphon minutus PCC 6605]
gi|428015354|gb|AFY91448.1| cytochrome c biogenesis factor [Chamaesiphon minutus PCC 6605]
Length = 268
Score = 46.2 bits (108), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 92/250 (36%), Gaps = 43/250 (17%)
Query: 173 PLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEE 232
P K S E +ILLR A LVQ + +P + L +L P+ E
Sbjct: 15 PKKDPKSLEDTSKILLRQAA--------GLVQFQQYEQAIPRVA----LATQLAPKSHE- 61
Query: 233 ILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAY 292
W LG + +++ + Q I L A+ P + D + LG AY
Sbjct: 62 -----------------AWFFLGSLYVQTQKYQRGIDALLQAKAIKPQDPDILFMLGSAY 104
Query: 293 FQSGDMEQSAKCFQ-DLILKDQNHPAAL-INYAALLLCKYGSVLAGA-----------GA 339
FQ G++ Q+ Q L +K N+ A + A KY +A A
Sbjct: 105 FQKGELPQAIDTLQAGLKIKPDNNSALFDLGNAYYKSNKYADAIAQYQKAVKKDPKFWPA 164
Query: 340 NTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAK 399
G + +N A + A+ DPKAA +A A + G + EKA
Sbjct: 165 INNIGLVNYETGDINGAMQNWQRAIAIDPKAAEPVLAMAVALFAQGKQVEAFTTAEKAIT 224
Query: 400 LEPNCMSTRY 409
L+ + +Y
Sbjct: 225 LDSRYANIQY 234
>gi|32307150|ref|NP_858059.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
110 kDa subunit isoform 2 [Homo sapiens]
gi|397498836|ref|XP_003820180.1| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit isoform
2 [Pan paniscus]
gi|426396358|ref|XP_004064414.1| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit isoform
2 [Gorilla gorilla gorilla]
gi|15680175|gb|AAH14434.1| O-linked N-acetylglucosamine (GlcNAc) transferase
(UDP-N-acetylglucosamine:polypeptide-N-
acetylglucosaminyl transferase) [Homo sapiens]
gi|18250914|emb|CAC86127.1| UDP-N-acatylglucosamine: polypeptide-N-acetylglucosaminyl
transferase [Homo sapiens]
gi|119625692|gb|EAX05287.1| O-linked N-acetylglucosamine (GlcNAc) transferase
(UDP-N-acetylglucosamine:polypeptide-N-
acetylglucosaminyl transferase), isoform CRA_c [Homo
sapiens]
gi|123993895|gb|ABM84549.1| O-linked N-acetylglucosamine (GlcNAc) transferase
(UDP-N-acetylglucosamine:polypeptide-N-
acetylglucosaminyl transferase) [synthetic construct]
gi|124000677|gb|ABM87847.1| O-linked N-acetylglucosamine (GlcNAc) transferase
(UDP-N-acetylglucosamine:polypeptide-N-
acetylglucosaminyl transferase) [synthetic construct]
gi|224487755|dbj|BAH24112.1| O-linked N-acetylglucosamine (GlcNAc) transferase [synthetic
construct]
gi|410227762|gb|JAA11100.1| O-linked N-acetylglucosamine (GlcNAc) transferase
(UDP-N-acetylglucosamine:polypeptide-N-
acetylglucosaminyl transferase) [Pan troglodytes]
gi|410257114|gb|JAA16524.1| O-linked N-acetylglucosamine (GlcNAc) transferase
(UDP-N-acetylglucosamine:polypeptide-N-
acetylglucosaminyl transferase) [Pan troglodytes]
Length = 1036
Score = 46.2 bits (108), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 62/155 (40%), Gaps = 21/155 (13%)
Query: 251 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 310
++ LG + + G+LQ +I L + P+ D NL A +GDME + + +
Sbjct: 82 YSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAY----- 136
Query: 311 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 370
+ + Y L C + G L + AK C L A++ P
Sbjct: 137 ------VSALQYNPDLYC----------VRSDLGNLLKALGRLEEAKACYLKAIETQPNF 180
Query: 371 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 405
A W+NL + G+ + EKA L+PN +
Sbjct: 181 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL 215
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 129/330 (39%), Gaps = 67/330 (20%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
LEE + +++++ AV W+ LG + G + +I + +DPN D
Sbjct: 162 RLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLD----- 216
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL- 347
AY G++ + A+ F + AA + AL L +V+ G AC+
Sbjct: 217 --AYINLGNVLKEARIFDRAV-------AAYLR--ALSLSPNHAVV------HGNLACVY 259
Query: 348 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 407
+ +++A + A++ P + NLANA G + C A +L P
Sbjct: 260 YEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPT---- 315
Query: 408 RYAVAVSRIKDAERSQ--------------EPTEQLSWAGNEMASILREGDPVQIEPPIA 453
+A +++ + + +R Q E + + A + +AS+L++ +Q A
Sbjct: 316 -HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQ----EA 370
Query: 454 WAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKAD 513
+ + A A+ N L +M++ G A +C A++ +
Sbjct: 371 LMHYKEAIRISPTFADAYSNMGNTLKEMQDVQG---------------ALQCYTRAIQIN 415
Query: 514 PKAAHIWANLANAYYLTGDHRSSGKCLEKV 543
P A +NLA+ H+ SG E +
Sbjct: 416 PAFADAHSNLASI------HKDSGNIPEAI 439
>gi|391328604|ref|XP_003738777.1| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit
[Metaseiulus occidentalis]
Length = 1034
Score = 46.2 bits (108), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 65/155 (41%), Gaps = 21/155 (13%)
Query: 251 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 310
++ LG +L + G LQ ++ + + P+ D NL A +GDMEQ+ + +
Sbjct: 102 YSNLGNVLKERGHLQEALDNYRQAVRLKPDFIDGYINLAAALVAAGDMEQAVQAY----- 156
Query: 311 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 370
+ + Y L C + G L S ++ AK C L A++ P
Sbjct: 157 ------ISALQYNPDLYC----------VRSDLGNLLKALSRLDEAKACYLKAIETCPTF 200
Query: 371 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 405
A W+NL + G+ + EKA L+P+ +
Sbjct: 201 AVAWSNLGCVFNSQGEVWLAIHHFEKAVALDPHFL 235
Score = 42.4 bits (98), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 68/168 (40%), Gaps = 13/168 (7%)
Query: 248 AVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQD 307
AVV L + + G + +I + + PN D NL A + G +++S KC+
Sbjct: 269 AVVHGNLACVYYEQGLIDMAIETYKRAIELQPNFPDAYCNLANALKEKGHVQESEKCYNT 328
Query: 308 LILKDQNHPAALINYAAL------------LLCKYGSVLA-GAGANTGEGACLDQASAVN 354
+ +H +L N A + L K V A A++ + L Q +N
Sbjct: 329 ALRLMPSHADSLNNLANIKREQGQIEDATKLYAKALDVYPEFAAAHSNLASVLQQQGKLN 388
Query: 355 VAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 402
A A++ P A ++N+ N GD + + +C +A + P
Sbjct: 389 EALMHYREAIRISPTFADAYSNMGNTLKELGDIQGAMQCYSRAITINP 436
Score = 39.7 bits (91), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 66/156 (42%), Gaps = 23/156 (14%)
Query: 248 AVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQD 307
AV W+ LG + G + +I +A+DP+ D AY G++ + A+ F
Sbjct: 201 AVAWSNLGCVFNSQGEVWLAIHHFEKAVALDPHFLD-------AYINLGNVLKEARIFDR 253
Query: 308 LILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL-DQASAVNVAKECLLAALKA 366
+ AA + AL L +V+ G AC+ + +++A E A++
Sbjct: 254 AV-------AAYLR--ALSLSPNNAVV------HGNLACVYYEQGLIDMAIETYKRAIEL 298
Query: 367 DPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 402
P + NLANA G + S KC A +L P
Sbjct: 299 QPNFPDAYCNLANALKEKGHVQESEKCYNTALRLMP 334
>gi|378763101|ref|YP_005191717.1| UDP-N-acetylglucosamine-peptide N-acetylglucosaminyltransferase 110
kDa subunit O-linked N-acetylglucosamine transferase 110
kDa subunit; O-GlcNAc transferase subunit p110
[Sinorhizobium fredii HH103]
gi|365182729|emb|CCE99578.1| UDP-N-acetylglucosamine-peptide N-acetylglucosaminyltransferase 110
kDa subunit O-linked N-acetylglucosamine transferase 110
kDa subunit; O-GlcNAc transferase subunit p110
[Sinorhizobium fredii HH103]
Length = 1209
Score = 46.2 bits (108), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 73/175 (41%), Gaps = 21/175 (12%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
+L+ L+ L +++++ + WN LGL+ G +++ + +A+DP + NL
Sbjct: 423 DLDGALADLNKALKTAPGSSTTWNFLGLVQGARGDNRAAEAAFKEAIALDPLDPVAHANL 482
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLD 348
I Y M ++ + + D + AL+ G
Sbjct: 483 AIQYMDEMRMAEARREIDTALSVDPSFDVALV---------------------ARGRYHL 521
Query: 349 QASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 403
Q V+ A E LLA A+P ++ LA A+Y GD + L+ A +L+PN
Sbjct: 522 QNGEVDKAVEDLLAGSTANPAYSNAQLLLAAAHYEKGDRIPGAQALDNADRLDPN 576
>gi|389581420|ref|ZP_10171447.1| tetratricopeptide repeat protein [Desulfobacter postgatei 2ac9]
gi|389403055|gb|EIM65277.1| tetratricopeptide repeat protein [Desulfobacter postgatei 2ac9]
Length = 580
Score = 46.2 bits (108), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 61/276 (22%), Positives = 108/276 (39%), Gaps = 65/276 (23%)
Query: 136 EEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKA-------EEILL 188
E++ T L + + +P NA+ +F LG+ Y+ L +P KA+ Y K ++ +L
Sbjct: 301 EDRYQDAVTVLSQIRKALPGNANINFFLGMAYEGLEKPDKAIECYLKVTPDHPQYKKTIL 360
Query: 189 RC---EADIARP-ELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSD 244
D+ R E + ++ HH Q P+++ +I S L Q +
Sbjct: 361 SIAFLYRDMNRTVEAIQFLEQHHRQS----------------PQDI-DITSYLASFYQEN 403
Query: 245 TRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKC 304
+ ++++L L P N D + LG+ +G +S +
Sbjct: 404 NSHDI-----------------AVTMLQRALKEAPQNTDLLFKLGVVLDAAGQRRKSIET 446
Query: 305 FQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAAL 364
+ +I D H +AL NY G A G N +N A + + AL
Sbjct: 447 MKTIIRLDSEHASAL-NYL-------GYTYAEMGIN------------LNQALKLVQRAL 486
Query: 365 KADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKL 400
+ P+ +I +L Y+ + + LEKA +L
Sbjct: 487 EIRPEDGYIMDSLGWVYFKKQAYDKAIFYLEKAVEL 522
>gi|149758511|ref|XP_001493438.1| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit isoform
2 [Equus caballus]
gi|291407675|ref|XP_002720148.1| PREDICTED: O-linked GlcNAc transferase isoform 1 [Oryctolagus
cuniculus]
gi|296235745|ref|XP_002763024.1| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit isoform
2 [Callithrix jacchus]
gi|348570516|ref|XP_003471043.1| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit-like
isoform 1 [Cavia porcellus]
gi|402910498|ref|XP_003917912.1| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit isoform
2 [Papio anubis]
gi|426257212|ref|XP_004022226.1| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit isoform
1 [Ovis aries]
gi|380817298|gb|AFE80523.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
110 kDa subunit isoform 2 [Macaca mulatta]
gi|383422241|gb|AFH34334.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
110 kDa subunit isoform 2 [Macaca mulatta]
Length = 1036
Score = 46.2 bits (108), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 62/155 (40%), Gaps = 21/155 (13%)
Query: 251 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 310
++ LG + + G+LQ +I L + P+ D NL A +GDME + + +
Sbjct: 82 YSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAY----- 136
Query: 311 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 370
+ + Y L C + G L + AK C L A++ P
Sbjct: 137 ------VSALQYNPDLYC----------VRSDLGNLLKALGRLEEAKACYLKAIETQPNF 180
Query: 371 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 405
A W+NL + G+ + EKA L+PN +
Sbjct: 181 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL 215
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 129/330 (39%), Gaps = 67/330 (20%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
LEE + +++++ AV W+ LG + G + +I + +DPN D
Sbjct: 162 RLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLD----- 216
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL- 347
AY G++ + A+ F + AA + AL L +V+ G AC+
Sbjct: 217 --AYINLGNVLKEARIFDRAV-------AAYLR--ALSLSPNHAVV------HGNLACVY 259
Query: 348 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 407
+ +++A + A++ P + NLANA G + C A +L P
Sbjct: 260 YEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPT---- 315
Query: 408 RYAVAVSRIKDAERSQ--------------EPTEQLSWAGNEMASILREGDPVQIEPPIA 453
+A +++ + + +R Q E + + A + +AS+L++ +Q A
Sbjct: 316 -HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQ----EA 370
Query: 454 WAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKAD 513
+ + A A+ N L +M++ G A +C A++ +
Sbjct: 371 LMHYKEAIRISPTFADAYSNMGNTLKEMQDVQG---------------ALQCYTRAIQIN 415
Query: 514 PKAAHIWANLANAYYLTGDHRSSGKCLEKV 543
P A +NLA+ H+ SG E +
Sbjct: 416 PAFADAHSNLASI------HKDSGNIPEAI 439
>gi|377657074|gb|AFB74087.1| O-linked N-acetylglucosamine transferase [Bubalus bubalis]
Length = 1046
Score = 46.2 bits (108), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 62/155 (40%), Gaps = 21/155 (13%)
Query: 251 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 310
++ LG + + G+LQ +I L + P+ D NL A +GDME + + +
Sbjct: 92 YSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAY----- 146
Query: 311 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 370
+ + Y L C + G L + AK C L A++ P
Sbjct: 147 ------VSALQYNPDLYC----------VRSDLGNLLKALGRLEEAKACYLKAIETQPNF 190
Query: 371 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 405
A W+NL + G+ + EKA L+PN +
Sbjct: 191 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL 225
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 129/330 (39%), Gaps = 67/330 (20%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
LEE + +++++ AV W+ LG + G + +I + +DPN D
Sbjct: 172 RLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLD----- 226
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL- 347
AY G++ + A+ F + AA + AL L +V+ G AC+
Sbjct: 227 --AYINLGNVLKEARIFDRAV-------AAYLR--ALSLSPNHAVV------HGNLACVY 269
Query: 348 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 407
+ +++A + A++ P + NLANA G + C A +L P
Sbjct: 270 YEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPT---- 325
Query: 408 RYAVAVSRIKDAERSQ--------------EPTEQLSWAGNEMASILREGDPVQIEPPIA 453
+A +++ + + +R Q E + + A + +AS+L++ +Q A
Sbjct: 326 -HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQ----EA 380
Query: 454 WAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKAD 513
+ + A A+ N L +M++ G A +C A++ +
Sbjct: 381 LMHYKEAIRISPTFADAYSNMGNTLKEMQDVQG---------------ALQCYTRAIQIN 425
Query: 514 PKAAHIWANLANAYYLTGDHRSSGKCLEKV 543
P A +NLA+ H+ SG E +
Sbjct: 426 PAFADAHSNLASI------HKDSGNIPEAI 449
>gi|363732735|ref|XP_003641145.1| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit isoform
2 [Gallus gallus]
Length = 1045
Score = 46.2 bits (108), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 62/155 (40%), Gaps = 21/155 (13%)
Query: 251 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 310
++ LG + + G+LQ +I L + P+ D NL A +GDME + + +
Sbjct: 92 YSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAY----- 146
Query: 311 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 370
+ + Y L C + G L + AK C L A++ P
Sbjct: 147 ------VSALQYNPDLYC----------VRSDLGNLLKALGRLEEAKACYLKAIETQPNF 190
Query: 371 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 405
A W+NL + G+ + EKA L+PN +
Sbjct: 191 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL 225
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 130/330 (39%), Gaps = 67/330 (20%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
LEE + +++++ AV W+ LG + G + +I + +DPN D
Sbjct: 172 RLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLD----- 226
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL- 347
AY G++ + A+ F + AA + AL L +V+ G AC+
Sbjct: 227 --AYINLGNVLKEARIFDRAV-------AAYLR--ALSLSPNHAVV------HGNLACVY 269
Query: 348 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 407
+ +++A + A++ P + NLANA G + +C A +L P
Sbjct: 270 YEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEECYNTALRLCPT---- 325
Query: 408 RYAVAVSRIKDAERSQ--------------EPTEQLSWAGNEMASILREGDPVQIEPPIA 453
+A +++ + + +R Q E + + A + +AS+L++ +Q A
Sbjct: 326 -HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQ----EA 380
Query: 454 WAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKAD 513
+ + A A+ N L +M++ G A +C A++ +
Sbjct: 381 LMHYKEAIRISPTFADAYSNMGNTLKEMQDVQG---------------ALQCYTRAIQIN 425
Query: 514 PKAAHIWANLANAYYLTGDHRSSGKCLEKV 543
P A +NLA+ H+ SG E +
Sbjct: 426 PAFADAHSNLASI------HKDSGNIPEAI 449
>gi|348516826|ref|XP_003445938.1| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit isoform
3 [Oreochromis niloticus]
Length = 1064
Score = 46.2 bits (108), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 62/155 (40%), Gaps = 21/155 (13%)
Query: 251 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 310
++ LG + + G+LQ +I L + P+ D NL A +GDME + + +
Sbjct: 92 YSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAY----- 146
Query: 311 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 370
+ + Y L C + G L + AK C L A++ P
Sbjct: 147 ------VSALQYNPDLYC----------VRSDLGNLLKALGRLEEAKACYLKAIETQPNF 190
Query: 371 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 405
A W+NL + G+ + EKA L+PN +
Sbjct: 191 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL 225
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 88/422 (20%), Positives = 161/422 (38%), Gaps = 84/422 (19%)
Query: 151 RKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQC 210
++ P A A+ LG +Y+ GQ +A+ Y A LR + D I+ A
Sbjct: 83 KQNPMLAEAYSNLGNVYKERGQLQEAIEHYRHA----LRLKPDFIDG------YINLAAA 132
Query: 211 LLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISV 270
L+ ++GD +E + ++Q + V + LG +L GRL+ + +
Sbjct: 133 LV--AAGD-----------MEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKAC 179
Query: 271 LSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKY 330
+ PN NLG + G++ + F+ + D N A IN +L K
Sbjct: 180 YLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVL--KE 237
Query: 331 GSVLAGAGANT--------------GEGACL-DQASAVNVAKECLLAALKADPKAAHIWA 375
+ A A G AC+ + +++A + A++ P +
Sbjct: 238 ARIFDRAVAGYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYC 297
Query: 376 NLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQ------------ 423
NLANA G+ + +C A +L P +A +++ + + +R Q
Sbjct: 298 NLANALKEKGNVSEAEECYNTALRLCPT-----HADSLNNLANIKREQGYIEEAVQLYRK 352
Query: 424 --EPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFAAVQKTHHEVAAAFETEENELSKM 481
E + + A + +AS+L++ +Q A + + A A+ N L +M
Sbjct: 353 ALEVFPEFAAAHSNLASVLQQQGKLQ----EALMHYKEAIRISPTFADAYSNMGNTLKEM 408
Query: 482 EECAGAGESAFLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLE 541
++ G A +C A++ +P A +NLA+ H+ SG E
Sbjct: 409 QDVQG---------------ALQCYTRAIQINPAFADAHSNLASI------HKDSGNIPE 447
Query: 542 KV 543
+
Sbjct: 448 AI 449
>gi|348516822|ref|XP_003445936.1| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit isoform
1 [Oreochromis niloticus]
Length = 1048
Score = 46.2 bits (108), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 62/155 (40%), Gaps = 21/155 (13%)
Query: 251 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 310
++ LG + + G+LQ +I L + P+ D NL A +GDME + + +
Sbjct: 92 YSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAY----- 146
Query: 311 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 370
+ + Y L C + G L + AK C L A++ P
Sbjct: 147 ------VSALQYNPDLYC----------VRSDLGNLLKALGRLEEAKACYLKAIETQPNF 190
Query: 371 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 405
A W+NL + G+ + EKA L+PN +
Sbjct: 191 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL 225
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 88/422 (20%), Positives = 161/422 (38%), Gaps = 84/422 (19%)
Query: 151 RKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQC 210
++ P A A+ LG +Y+ GQ +A+ Y A LR + D I+ A
Sbjct: 83 KQNPMLAEAYSNLGNVYKERGQLQEAIEHYRHA----LRLKPDFIDG------YINLAAA 132
Query: 211 LLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISV 270
L+ ++GD +E + ++Q + V + LG +L GRL+ + +
Sbjct: 133 LV--AAGD-----------MEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKAC 179
Query: 271 LSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKY 330
+ PN NLG + G++ + F+ + D N A IN +L K
Sbjct: 180 YLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVL--KE 237
Query: 331 GSVLAGAGANT--------------GEGACL-DQASAVNVAKECLLAALKADPKAAHIWA 375
+ A A G AC+ + +++A + A++ P +
Sbjct: 238 ARIFDRAVAGYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYC 297
Query: 376 NLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQ------------ 423
NLANA G+ + +C A +L P +A +++ + + +R Q
Sbjct: 298 NLANALKEKGNVSEAEECYNTALRLCPT-----HADSLNNLANIKREQGYIEEAVQLYRK 352
Query: 424 --EPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFAAVQKTHHEVAAAFETEENELSKM 481
E + + A + +AS+L++ +Q A + + A A+ N L +M
Sbjct: 353 ALEVFPEFAAAHSNLASVLQQQGKLQ----EALMHYKEAIRISPTFADAYSNMGNTLKEM 408
Query: 482 EECAGAGESAFLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLE 541
++ G A +C A++ +P A +NLA+ H+ SG E
Sbjct: 409 QDVQG---------------ALQCYTRAIQINPAFADAHSNLASI------HKDSGNIPE 447
Query: 542 KV 543
+
Sbjct: 448 AI 449
>gi|291613071|ref|YP_003523228.1| hypothetical protein Slit_0601 [Sideroxydans lithotrophicus ES-1]
gi|291583183|gb|ADE10841.1| TPR repeat-containing protein [Sideroxydans lithotrophicus ES-1]
Length = 698
Score = 46.2 bits (108), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 79/180 (43%), Gaps = 19/180 (10%)
Query: 163 LGLMYQRLGQPLKAVSSYEKAEEI----------LLRCEADIARPELLSLVQIHHAQCLL 212
LG++ + +GQP++A + Y +A EI L + RP + + V HA L
Sbjct: 121 LGIIRKAMGQPVEAEACYRRAIEIRPNYADAYNNLGSVLQYLGRP-VEAEVSYKHAIQLE 179
Query: 213 PES--SGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISV 270
P S N + E E + L+ ++Q A +N LG L GRLQ + S
Sbjct: 180 PARAESYSNLGNTLQELGRYHEAEASLRRALQLQPDHAQAYNNLGGTLKHMGRLQEAESC 239
Query: 271 LSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQD-LILKDQNHPA-----ALINYAA 324
L + P + NLG G + ++ +C+++ L + + PA ++NYA+
Sbjct: 240 YRRALHISPEKAEVHSNLGATLMDMGRLHEAEQCYREALRINPEYFPAHSNLLFMMNYAS 299
Score = 39.3 bits (90), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 62/314 (19%), Positives = 115/314 (36%), Gaps = 41/314 (13%)
Query: 238 KESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGD 297
KE + + W LG++ + GR ++ + + + + PN+ + GNLGI G
Sbjct: 3 KEMTARFPQYGIGWKMLGVLFNQMGRNAEALGPMRNAITLLPNDAEAHGNLGIILNGLGM 62
Query: 298 MEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAK 357
++++A ++ I + N N G++ G C
Sbjct: 63 LDEAAASYRRAIQLNPNVAGWYFN--------LGNIFMAQGKWQKSEDCY---------- 104
Query: 358 ECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIK 417
+C+L LKAD ++ NL G + C +A ++ PN YA A + +
Sbjct: 105 QCVL-MLKAD--FPEVYNNLGIIRKAMGQPVEAEACYRRAIEIRPN-----YADAYNNLG 156
Query: 418 DAERSQEPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFAAVQKTHHEVAAAFETEEN- 476
L + G + + + +Q+EP A ++ + T E+ E E +
Sbjct: 157 SV---------LQYLGRPVEAEVSYKHAIQLEPARA-ESYSNLGNTLQELGRYHEAEASL 206
Query: 477 ----ELSKMEECAGAGESAFLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGD 532
+L A L + A+ C AL P+ A + +NL G
Sbjct: 207 RRALQLQPDHAQAYNNLGGTLKHMGRLQEAESCYRRALHISPEKAEVHSNLGATLMDMGR 266
Query: 533 HRSSGKCLEKVLMV 546
+ +C + L +
Sbjct: 267 LHEAEQCYREALRI 280
>gi|322419153|ref|YP_004198376.1| PEP-CTERM system TPR-repeat lipoprotein [Geobacter sp. M18]
gi|320125540|gb|ADW13100.1| PEP-CTERM system TPR-repeat lipoprotein [Geobacter sp. M18]
Length = 881
Score = 46.2 bits (108), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 50/102 (49%)
Query: 228 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 287
++ +E LS L S+Q+D ++ L + + G + L+ L DP N +
Sbjct: 138 KKYDEALSYLTRSLQADPGRSSAKLELAALHISMGNEDRARRALNELTGADPRNFKALYM 197
Query: 288 LGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCK 329
L + +G+ +Q+A ++ ++ +D+N PAA LLL K
Sbjct: 198 LAMLELAAGNKDQAAAVYRKILQQDKNQPAARFKLGGLLLEK 239
Score = 43.1 bits (100), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 39/77 (50%)
Query: 231 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 290
EE L + + D V +T+G L K+GR Q ++ VL + P + +LG+
Sbjct: 783 EEALRLAISAFRLDPGNPSVTDTVGYALYKNGRSQEAVKVLERAATLLPGDPTVRYHLGL 842
Query: 291 AYFQSGDMEQSAKCFQD 307
AY Q+GD ++ + QD
Sbjct: 843 AYHQAGDKARAQQALQD 859
>gi|158335983|ref|YP_001517157.1| TPR repeat-containing serine/threonine protein kinase
[Acaryochloris marina MBIC11017]
gi|158306224|gb|ABW27841.1| serine/threonine kinase with TPR repeats [Acaryochloris marina
MBIC11017]
Length = 810
Score = 46.2 bits (108), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 81/191 (42%), Gaps = 23/191 (12%)
Query: 234 LSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYF 293
+S E++ D + A +N G ++ G+ +++I+ + + PN NLG +F
Sbjct: 429 ISDYNEALTLDPKDAETYNHRGDAQVELGKYEAAIADYRKAIRLQPNQAQGYLNLGSVFF 488
Query: 294 QSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLA---GAGANTGEGACLDQA 350
G +E + K I + NH +A +N + Y SVL GA + + L
Sbjct: 489 VQGKLEAAVKELDKAIQAESNHLSAHVNRGS-----YRSVLGDPEGAEQDWEKALKLPVR 543
Query: 351 SAVNVA-----------KECLLA----ALKADPKAAHIWANLANAYYLTGDHRSSGKCLE 395
+A + A K+ +A AL +P+ NL +Y G+ + + +
Sbjct: 544 TAKDYASRGYAKSRLDRKQDAIADYNQALTINPQLTRAHTNLGGVFYEQGEIEQARQSFD 603
Query: 396 KAAKLEPNCMS 406
+A ++ PN S
Sbjct: 604 QALQINPNSTS 614
>gi|440901878|gb|ELR52744.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
110 kDa subunit, partial [Bos grunniens mutus]
Length = 1037
Score = 46.2 bits (108), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 62/155 (40%), Gaps = 21/155 (13%)
Query: 251 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 310
++ LG + + G+LQ +I L + P+ D NL A +GDME + + +
Sbjct: 83 YSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAY----- 137
Query: 311 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 370
+ + Y L C + G L + AK C L A++ P
Sbjct: 138 ------VSALQYNPDLYC----------VRSDLGNLLKALGRLEEAKACYLKAIETQPNF 181
Query: 371 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 405
A W+NL + G+ + EKA L+PN +
Sbjct: 182 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL 216
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 129/330 (39%), Gaps = 67/330 (20%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
LEE + +++++ AV W+ LG + G + +I + +DPN D
Sbjct: 163 RLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLD----- 217
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL- 347
AY G++ + A+ F + AA + AL L +V+ G AC+
Sbjct: 218 --AYINLGNVLKEARIFDRAV-------AAYLR--ALSLSPNHAVV------HGNLACVY 260
Query: 348 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 407
+ +++A + A++ P + NLANA G + C A +L P
Sbjct: 261 YEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPT---- 316
Query: 408 RYAVAVSRIKDAERSQ--------------EPTEQLSWAGNEMASILREGDPVQIEPPIA 453
+A +++ + + +R Q E + + A + +AS+L++ +Q A
Sbjct: 317 -HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQ----EA 371
Query: 454 WAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKAD 513
+ + A A+ N L +M++ G A +C A++ +
Sbjct: 372 LMHYKEAIRISPTFADAYSNMGNTLKEMQDVQG---------------ALQCYTRAIQIN 416
Query: 514 PKAAHIWANLANAYYLTGDHRSSGKCLEKV 543
P A +NLA+ H+ SG E +
Sbjct: 417 PAFADAHSNLASI------HKDSGNIPEAI 440
>gi|307154400|ref|YP_003889784.1| hypothetical protein Cyan7822_4601 [Cyanothece sp. PCC 7822]
gi|306984628|gb|ADN16509.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 7822]
Length = 291
Score = 46.2 bits (108), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 56/129 (43%), Gaps = 15/129 (11%)
Query: 207 HAQCLLPESSGDNSLDKELEPEELEE-------------ILSKLKESMQSDTRQAVVWNT 253
AQ LLP S +S E + EL E LS+ K S Q W
Sbjct: 24 FAQALLPYSPKLDSEKIEQQGLELAEDAIQLVRFQQPEAALSRAKLSTQLAPGHFQTWFI 83
Query: 254 LGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQS-AKCFQDLILKD 312
LG + ++ + I L+ LA++P LG AYFQ GD + + A+ + L LK
Sbjct: 84 LGTLYIQQEEFDAGIDALNRALALEPKEAGIFFTLGSAYFQRGDYQTAIAQIDKGLKLKP 143
Query: 313 QNHPAALIN 321
N PAAL +
Sbjct: 144 DN-PAALFD 151
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 84/186 (45%), Gaps = 26/186 (13%)
Query: 225 LEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDC 284
++ EE + + L ++ + ++A ++ TLG + G Q++I+ + L + P+N
Sbjct: 89 IQQEEFDAGIDALNRALALEPKEAGIFFTLGSAYFQRGDYQTAIAQIDKGLKLKPDNPAA 148
Query: 285 IGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEG 344
+ +LG +Y++ ++ + +Q + D+ A IN L+ + G + G
Sbjct: 149 LFDLGNSYYKLQKYPKAVEAYQKAVSVDKKFWPA-INNMGLIKYEQGDL---------AG 198
Query: 345 ACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNC 404
A +AV + KE +A+P+ A LA A Y G + K E A L+
Sbjct: 199 AIKQWQAAVAIDKE------QAEPQLA-----LAVATYAQGRQQEGLKMAEAALTLD--- 244
Query: 405 MSTRYA 410
+RYA
Sbjct: 245 --SRYA 248
>gi|66347873|ref|NP_001018115.1| O-linked N-acetylglucosamine transferase isoform 2 [Danio rerio]
gi|56967374|gb|AAW31871.1| O-GlcNAc transferase variant 2 [Danio rerio]
Length = 1052
Score = 46.2 bits (108), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 62/155 (40%), Gaps = 21/155 (13%)
Query: 251 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 310
++ LG + + G+LQ +I L + P+ D NL A +GDME + + +
Sbjct: 82 YSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAY----- 136
Query: 311 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 370
+ + Y L C + G L + AK C L A++ P
Sbjct: 137 ------VSALQYNPDLYC----------VRSDLGNLLKALGRLEEAKACYLKAIETQPNF 180
Query: 371 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 405
A W+NL + G+ + EKA L+PN +
Sbjct: 181 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL 215
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 88/422 (20%), Positives = 161/422 (38%), Gaps = 84/422 (19%)
Query: 151 RKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQC 210
++ P A A+ LG +Y+ GQ +A+ Y A LR + D I+ A
Sbjct: 73 KQNPMLAEAYSNLGNVYKERGQLQEAIEHYRHA----LRLKPDFIDG------YINLAAA 122
Query: 211 LLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISV 270
L+ ++GD +E + ++Q + V + LG +L GRL+ + +
Sbjct: 123 LV--AAGD-----------MEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKAC 169
Query: 271 LSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKY 330
+ PN NLG + G++ + F+ + D N A IN +L K
Sbjct: 170 YLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVL--KE 227
Query: 331 GSVLAGAGANT--------------GEGACL-DQASAVNVAKECLLAALKADPKAAHIWA 375
+ A A G AC+ + +++A + A++ P +
Sbjct: 228 ARIFDRAVAGYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYC 287
Query: 376 NLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQ------------ 423
NLANA G+ + +C A +L P +A +++ + + +R Q
Sbjct: 288 NLANALKEKGNVSEAEECYNTALRLCPT-----HADSLNNLANIKREQGNIEEAVQLYRK 342
Query: 424 --EPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFAAVQKTHHEVAAAFETEENELSKM 481
E + + A + +AS+L++ +Q A + + A A+ N L +M
Sbjct: 343 ALEVFPEFAAAHSNLASVLQQQGKLQ----EALMHYKEAIRISPTFADAYSNMGNTLKEM 398
Query: 482 EECAGAGESAFLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLE 541
++ G A +C A++ +P A +NLA+ H+ SG E
Sbjct: 399 QDVQG---------------ALQCYTRAIQINPAFADAHSNLASI------HKDSGNIPE 437
Query: 542 KV 543
+
Sbjct: 438 AI 439
>gi|3914191|sp|P56558.1|OGT1_RAT RecName: Full=UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit;
AltName: Full=O-GlcNAc transferase subunit p110;
AltName: Full=O-linked N-acetylglucosamine transferase
110 kDa subunit; Short=OGT
gi|1931579|gb|AAC53121.1| O-GlcNAc transferase, p110 subunit [Rattus norvegicus]
Length = 1036
Score = 46.2 bits (108), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 62/155 (40%), Gaps = 21/155 (13%)
Query: 251 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 310
++ LG + + G+LQ +I L + P+ D NL A +GDME + + +
Sbjct: 82 YSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAY----- 136
Query: 311 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 370
+ + Y L C + G L + AK C L A++ P
Sbjct: 137 ------VSALQYNPDLYC----------VRSDLGNLLKALGRLEEAKACYLKAIETQPNF 180
Query: 371 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 405
A W+NL + G+ + EKA L+PN +
Sbjct: 181 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL 215
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 129/330 (39%), Gaps = 67/330 (20%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
LEE + +++++ AV W+ LG + G + +I + +DPN D
Sbjct: 162 RLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLD----- 216
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL- 347
AY G++ + A+ F + AA + AL L +V+ G AC+
Sbjct: 217 --AYINLGNVLKEARIFDRAV-------AAYLR--ALSLSPNHAVV------HGNLACVY 259
Query: 348 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 407
+ +++A + A++ P + NLANA G + C A +L P
Sbjct: 260 YEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPT---- 315
Query: 408 RYAVAVSRIKDAERSQ--------------EPTEQLSWAGNEMASILREGDPVQIEPPIA 453
+A +++ + + +R Q E + + A + +AS+L++ +Q A
Sbjct: 316 -HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQ----EA 370
Query: 454 WAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKAD 513
+ + A A+ N L +M++ G A +C A++ +
Sbjct: 371 LMHYKEAIRISPTFADAYSNMGNTLKEMQDVQG---------------ALQCYTRAIQIN 415
Query: 514 PKAAHIWANLANAYYLTGDHRSSGKCLEKV 543
P A +NLA+ H+ SG E +
Sbjct: 416 PAFADAHSNLASI------HKDSGNIPEAI 439
>gi|393765846|ref|ZP_10354406.1| tetratricopeptide tpr 2 repeat protein [Methylobacterium sp. GXF4]
gi|392728738|gb|EIZ86043.1| tetratricopeptide tpr 2 repeat protein [Methylobacterium sp. GXF4]
Length = 618
Score = 46.2 bits (108), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 70/172 (40%), Gaps = 22/172 (12%)
Query: 232 EILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIA 291
E L L ++ Q+ + A + N LG++L GR + L L +DP + NLG+A
Sbjct: 31 EALPLLNKAAQTTPQDAEIHNNLGVVLNTLGRPAEAAVALERSLELDPLSASTHNNLGVA 90
Query: 292 YFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQAS 351
Y + ++ CF+ + H A +N L A LD
Sbjct: 91 YRALRRLPEAVACFEH--SRALKHDAGTVNNLGL-------------------AYLDLER 129
Query: 352 AVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 403
N A C A+ DP +A +LA A GD + + L+ AA L+P
Sbjct: 130 VEN-ATRCFREAIALDPASAQAHLHLAFALRKAGDLLGALESLDAAANLDPG 180
>gi|327287038|ref|XP_003228236.1| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit-like
isoform 2 [Anolis carolinensis]
Length = 1036
Score = 46.2 bits (108), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 62/155 (40%), Gaps = 21/155 (13%)
Query: 251 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 310
++ LG + + G+LQ +I L + P+ D NL A +GDME + + +
Sbjct: 82 YSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAY----- 136
Query: 311 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 370
+ + Y L C + G L + AK C L A++ P
Sbjct: 137 ------VSALQYNPDLYC----------VRSDLGNLLKALGRLEEAKACYLKAIETQPNF 180
Query: 371 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 405
A W+NL + G+ + EKA L+PN +
Sbjct: 181 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL 215
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 130/330 (39%), Gaps = 67/330 (20%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
LEE + +++++ AV W+ LG + G + +I + +DPN D
Sbjct: 162 RLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLD----- 216
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL- 347
AY G++ + A+ F + AA + AL L +V+ G AC+
Sbjct: 217 --AYINLGNVLKEARIFDRAV-------AAYLR--ALSLSPNHAVV------HGNLACVY 259
Query: 348 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 407
+ +++A + A++ P + NLANA G + +C A +L P
Sbjct: 260 YEQGLIDLAIDTYKRAIELQPHFPDAYCNLANALKEKGSVAEAEECYNTALRLCPT---- 315
Query: 408 RYAVAVSRIKDAERSQ--------------EPTEQLSWAGNEMASILREGDPVQIEPPIA 453
+A +++ + + +R Q E + + A + +AS+L++ +Q A
Sbjct: 316 -HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQ----EA 370
Query: 454 WAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKAD 513
+ + A A+ N L +M++ G A +C A++ +
Sbjct: 371 LMHYKEAIRISPTFADAYSNMGNTLKEMQDVQG---------------ALQCYTRAIQIN 415
Query: 514 PKAAHIWANLANAYYLTGDHRSSGKCLEKV 543
P A +NLA+ H+ SG E +
Sbjct: 416 PAFADAHSNLASI------HKDSGNIPEAI 439
>gi|431914414|gb|ELK15671.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
110 kDa subunit [Pteropus alecto]
Length = 1046
Score = 46.2 bits (108), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 62/155 (40%), Gaps = 21/155 (13%)
Query: 251 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 310
++ LG + + G+LQ +I L + P+ D NL A +GDME + + +
Sbjct: 92 YSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAY----- 146
Query: 311 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 370
+ + Y L C + G L + AK C L A++ P
Sbjct: 147 ------VSALQYNPDLYC----------VRSDLGNLLKALGRLEEAKACYLKAIETQPNF 190
Query: 371 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 405
A W+NL + G+ + EKA L+PN +
Sbjct: 191 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL 225
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 129/330 (39%), Gaps = 67/330 (20%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
LEE + +++++ AV W+ LG + G + +I + +DPN D
Sbjct: 172 RLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLD----- 226
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL- 347
AY G++ + A+ F + AA + AL L +V+ G AC+
Sbjct: 227 --AYINLGNVLKEARIFDRAV-------AAYLR--ALSLSPNHAVV------HGNLACVY 269
Query: 348 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 407
+ +++A + A++ P + NLANA G + C A +L P
Sbjct: 270 YEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPT---- 325
Query: 408 RYAVAVSRIKDAERSQ--------------EPTEQLSWAGNEMASILREGDPVQIEPPIA 453
+A +++ + + +R Q E + + A + +AS+L++ +Q A
Sbjct: 326 -HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQ----EA 380
Query: 454 WAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKAD 513
+ + A A+ N L +M++ G A +C A++ +
Sbjct: 381 LMHYKEAIRISPTFADAYSNMGNTLKEMQDVQG---------------ALQCYTRAIQIN 425
Query: 514 PKAAHIWANLANAYYLTGDHRSSGKCLEKV 543
P A +NLA+ H+ SG E +
Sbjct: 426 PAFADAHSNLASI------HKDSGNIPEAI 449
>gi|147899141|ref|NP_001091539.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
110 kDa subunit [Bos taurus]
gi|146186901|gb|AAI40543.1| OGT protein [Bos taurus]
gi|296470806|tpg|DAA12921.1| TPA: O-linked N-acetylglucosamine (GlcNAc) transferase
(UDP-N-acetylglucosamine:polypeptide-N-
acetylglucosaminyl transferase) [Bos taurus]
Length = 1036
Score = 46.2 bits (108), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 62/155 (40%), Gaps = 21/155 (13%)
Query: 251 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 310
++ LG + + G+LQ +I L + P+ D NL A +GDME + + +
Sbjct: 82 YSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAY----- 136
Query: 311 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 370
+ + Y L C + G L + AK C L A++ P
Sbjct: 137 ------VSALQYNPDLYC----------VRSDLGNLLKALGRLEEAKACYLKAIETQPNF 180
Query: 371 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 405
A W+NL + G+ + EKA L+PN +
Sbjct: 181 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL 215
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 129/330 (39%), Gaps = 67/330 (20%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
LEE + +++++ AV W+ LG + G + +I + +DPN D
Sbjct: 162 RLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLD----- 216
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL- 347
AY G++ + A+ F + AA + AL L +V+ G AC+
Sbjct: 217 --AYINLGNVLKEARIFDRAV-------AAYLR--ALSLSPNHAVV------HGNLACVY 259
Query: 348 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 407
+ +++A + A++ P + NLANA G + C A +L P
Sbjct: 260 YEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPT---- 315
Query: 408 RYAVAVSRIKDAERSQ--------------EPTEQLSWAGNEMASILREGDPVQIEPPIA 453
+A +++ + + +R Q E + + A + +AS+L++ +Q A
Sbjct: 316 -HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQ----EA 370
Query: 454 WAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKAD 513
+ + A A+ N L +M++ G A +C A++ +
Sbjct: 371 LMHYKEAIRISPTFADAYSNMGNTLKEMQDVQG---------------ALQCYTRAIQIN 415
Query: 514 PKAAHIWANLANAYYLTGDHRSSGKCLEKV 543
P A +NLA+ H+ SG E +
Sbjct: 416 PAFADAHSNLASI------HKDSGNIPEAI 439
>gi|403305183|ref|XP_003943149.1| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit isoform
2 [Saimiri boliviensis boliviensis]
Length = 1036
Score = 46.2 bits (108), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 62/155 (40%), Gaps = 21/155 (13%)
Query: 251 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 310
++ LG + + G+LQ +I L + P+ D NL A +GDME + + +
Sbjct: 82 YSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAY----- 136
Query: 311 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 370
+ + Y L C + G L + AK C L A++ P
Sbjct: 137 ------VSALQYNPDLYC----------VRSDLGNLLKALGRLEEAKACYLKAIETQPNF 180
Query: 371 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 405
A W+NL + G+ + EKA L+PN +
Sbjct: 181 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL 215
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 129/330 (39%), Gaps = 67/330 (20%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
LEE + +++++ AV W+ LG + G + +I + +DPN D
Sbjct: 162 RLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLD----- 216
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL- 347
AY G++ + A+ F + AA + AL L +V+ G AC+
Sbjct: 217 --AYINLGNVLKEARIFDRAV-------AAYLR--ALSLSPNHAVV------HGNLACVY 259
Query: 348 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 407
+ +++A + A++ P + NLANA G + C A +L P
Sbjct: 260 YEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPT---- 315
Query: 408 RYAVAVSRIKDAERSQ--------------EPTEQLSWAGNEMASILREGDPVQIEPPIA 453
+A +++ + + +R Q E + + A + +AS+L++ +Q A
Sbjct: 316 -HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQ----EA 370
Query: 454 WAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKAD 513
+ + A A+ N L +M++ G A +C A++ +
Sbjct: 371 LMHYKEAIRISPTFADAYSNMGNTLKEMQDVQG---------------ALQCYTRAIQIN 415
Query: 514 PKAAHIWANLANAYYLTGDHRSSGKCLEKV 543
P A +NLA+ H+ SG E +
Sbjct: 416 PAFADAHSNLASI------HKDSGNIPEAI 439
>gi|307731322|ref|YP_003908546.1| hypothetical protein [Burkholderia sp. CCGE1003]
gi|307585857|gb|ADN59255.1| Tetratricopeptide TPR_1 repeat-containing protein [Burkholderia sp.
CCGE1003]
Length = 602
Score = 46.2 bits (108), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 67/167 (40%), Gaps = 21/167 (12%)
Query: 237 LKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSG 296
+ ++++ D + A W+ GL GRL + L + PN D N G+A G
Sbjct: 77 MSQALKHDRQDAACWSNRGLAAAALGRLDEATICYDQALQLQPNFADARNNFGVALQAQG 136
Query: 297 DMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVA 356
+ ++ + ++ I + AL++ A+ G L + A
Sbjct: 137 ALNEAVEQYRLAIASN----PALVD-----------------AHLNLGTALGKLGRFAEA 175
Query: 357 KECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 403
C AL+ DP +A N NA+ G+H ++ E+A L P+
Sbjct: 176 LACYRNALQLDPASAEAHFNAGNAHNARGEHEAAVASFERALALRPD 222
>gi|66793439|ref|NP_001019747.1| O-linked N-acetylglucosamine (GlcNAc) transferase [Xenopus
(Silurana) tropicalis]
gi|60618530|gb|AAH90599.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
[Xenopus (Silurana) tropicalis]
Length = 1035
Score = 46.2 bits (108), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 62/155 (40%), Gaps = 21/155 (13%)
Query: 251 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 310
++ LG + + G+LQ +I L + P+ D NL A +GDME + + +
Sbjct: 82 YSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAY----- 136
Query: 311 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 370
+ + Y L C + G L + AK C L A++ P
Sbjct: 137 ------VSALQYNPDLYC----------VRSDLGNLLKALGRLEEAKACYLKAIETQPNF 180
Query: 371 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 405
A W+NL + G+ + EKA L+PN +
Sbjct: 181 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL 215
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 130/330 (39%), Gaps = 67/330 (20%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
LEE + +++++ AV W+ LG + G + +I + +DPN D
Sbjct: 162 RLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLD----- 216
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL- 347
AY G++ + A+ F + AA + AL L +V+ G AC+
Sbjct: 217 --AYINLGNVLKEARIFDRAV-------AAYLR--ALSLSPNHAVV------HGNLACVY 259
Query: 348 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 407
+ +++A + A++ P + NLANA G + +C A +L P
Sbjct: 260 YEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVVDAEECYNTALRLCPT---- 315
Query: 408 RYAVAVSRIKDAERSQ--------------EPTEQLSWAGNEMASILREGDPVQIEPPIA 453
+A +++ + + +R Q E + + A + +AS+L++ +Q A
Sbjct: 316 -HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQ----EA 370
Query: 454 WAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKAD 513
+ + A A+ N L +M++ G A +C A++ +
Sbjct: 371 LMHYKEAIRISPTFADAYSNMGNTLKEMQDVQG---------------ALQCYTRAIQIN 415
Query: 514 PKAAHIWANLANAYYLTGDHRSSGKCLEKV 543
P A +NLA+ H+ SG E +
Sbjct: 416 PAFADAHSNLASI------HKDSGNIPEAI 439
>gi|333993657|ref|YP_004526270.1| putative slei family protein [Treponema azotonutricium ZAS-9]
gi|333734825|gb|AEF80774.1| putative slei family protein [Treponema azotonutricium ZAS-9]
Length = 865
Score = 46.2 bits (108), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 77/193 (39%), Gaps = 26/193 (13%)
Query: 244 DTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAK 303
D + G+ L +GRL+ + + + L P + + NLGI +F+ G +++
Sbjct: 172 DRNNPTLHFNYGVALEANGRLEDAANEYRAALRSKPGWLEPMNNLGIIHFKQGRHDKALD 231
Query: 304 CFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAA 363
F +I D ++ A N G + A G N A + A
Sbjct: 232 VFNRIIDSDPSNAEARNN--------MGVIQADQGKNKE-------------AVQNYRRA 270
Query: 364 LKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQ 423
++ADP+ NL +GD ++ LEK KL P+ R ++ +K ER
Sbjct: 271 IEADPRYTKAVVNLERTLEESGDFANAVLELEKLVKLTPDSADLRDRLSGLYLK-MERYP 329
Query: 424 EPTEQ----LSWA 432
E EQ L WA
Sbjct: 330 EALEQAKAALEWA 342
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/92 (22%), Positives = 47/92 (51%)
Query: 230 LEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLG 289
LE+ ++ + +++S N LG+I K GR ++ V + ++ DP+N + N+G
Sbjct: 192 LEDAANEYRAALRSKPGWLEPMNNLGIIHFKQGRHDKALDVFNRIIDSDPSNAEARNNMG 251
Query: 290 IAYFQSGDMEQSAKCFQDLILKDQNHPAALIN 321
+ G +++ + ++ I D + A++N
Sbjct: 252 VIQADQGKNKEAVQNYRRAIEADPRYTKAVVN 283
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 52/262 (19%), Positives = 95/262 (36%), Gaps = 44/262 (16%)
Query: 152 KMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCL 211
K P + AH LLG R + +A + +L + DI L ++ I+ Q
Sbjct: 35 KKPDSREAHLLLGATLAREAKLTEAADEFTT---LLAKNPQDIEA--LNNIAVIYRRQG- 88
Query: 212 LPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVL 271
+L++ L L E++ + +A +G I + G L+++
Sbjct: 89 -----------------KLQDALGALVEAIDLEPTKAEFHYNIGNIHKQMGNLKAASMAY 131
Query: 272 SSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYG 331
+ ++ +DPN NLG Y Q + +++ F + D+N+P NY
Sbjct: 132 AKVIELDPNYVSAYNNLGTIYDQLKEYDKAYGIFHKGLNLDRNNPTLHFNY--------- 182
Query: 332 SVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSG 391
G L+ + A AAL++ P NL ++ G H +
Sbjct: 183 ------------GVALEANGRLEDAANEYRAALRSKPGWLEPMNNLGIIHFKQGRHDKAL 230
Query: 392 KCLEKAAKLEPNCMSTRYAVAV 413
+ +P+ R + V
Sbjct: 231 DVFNRIIDSDPSNAEARNNMGV 252
>gi|456860929|gb|EMF79639.1| tetratricopeptide repeat protein [Leptospira weilii serovar Topaz
str. LT2116]
Length = 1197
Score = 46.2 bits (108), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 32/169 (18%), Positives = 78/169 (46%), Gaps = 23/169 (13%)
Query: 135 REEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADI 194
R+ ++ + G + K P + ++H+ +G+++ + + ++ S++++ +LL +
Sbjct: 688 RKGEIDKAEAGFKEILAKKPDSYYSHYQMGIIHLQRKEYEASIDSFDRS--LLLNIDFVA 745
Query: 195 ARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTL 254
AR + + ++H SG+ L KE + + +MQ D+ + +
Sbjct: 746 AR--IGKGISMYH--------SGNKKLAKE-----------EFEIAMQQDSANELAPYNI 784
Query: 255 GLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAK 303
G+IL +I++ ++ +P D + Y++ GD+EQ+ K
Sbjct: 785 GIILFNDNLYNEAITIFKEIIQKNPEFSDAHYQISYIYYKRGDLEQAEK 833
>gi|427722550|ref|YP_007069827.1| hypothetical protein Lepto7376_0567 [Leptolyngbya sp. PCC 7376]
gi|427354270|gb|AFY36993.1| Tetratricopeptide TPR_1 repeat-containing protein [Leptolyngbya sp.
PCC 7376]
Length = 493
Score = 46.2 bits (108), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 78/381 (20%), Positives = 143/381 (37%), Gaps = 65/381 (17%)
Query: 68 DSNHSSSHHDKGSILM--------------SKEMDVAEV-----EGKKINKLGKCRSRIS 108
D+ HS + +++G +L + E+ V G + LGK I
Sbjct: 66 DAEHSETWYNRGIVLFQLQRYGEALDSYNHAVELRADSVPAWNNRGNTLKVLGKYEEAID 125
Query: 109 SKMDSALEFGVD--ADGDQSG-LGTSSSSREEKVSSLKTGLVHVARKMPKNAHAHFLLGL 165
S D AL+ D D G L E + S LV P +A + GL
Sbjct: 126 S-YDQALKLEPDDYLSWDNKGDLLKELKQYHEAIQSYSKALV----IKPNSAEIWYKRGL 180
Query: 166 MYQRLGQPLKAVSSYEKAEEI--------------LLRCEADIARPELLSLVQIHHAQCL 211
+++ L Q A+ +Y KA EI L+R E + A C+
Sbjct: 181 VFELLSQDNDALMNYSKALEINQNSPHILCARGSILVRLERFQEALMCFNRAIELKADCV 240
Query: 212 LPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVL 271
S L+ + +++E+ + +++ + Q ++W G + L+ + Q +
Sbjct: 241 EAWSHKGFLLE---QLKKIEDAIFSYGQALAVNPNQEILWYHRGNLFLRQKQYQRGLHSY 297
Query: 272 SSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYG 331
+L ++ + + N G++ ++ GD+ + KCFQ ++ + +P YA G
Sbjct: 298 DEVLRLNREHYQSLNNKGVSLYKLGDVHGAFKCFQKVL---EINP-----YAFSAWNNQG 349
Query: 332 SVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSG 391
+ G C D+ ALK +PK + IW+ G + +
Sbjct: 350 QICKAIGDYQEAIICYDK-------------ALKVEPKQSKIWSKRGLCLAKLGHYEEAI 396
Query: 392 KCLEKAAKLEPNCMSTRYAVA 412
++A +L+ + YA A
Sbjct: 397 NSFQQAIQLDKSYAEALYAQA 417
>gi|301791307|ref|XP_002930622.1| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit-like
isoform 1 [Ailuropoda melanoleuca]
gi|410988812|ref|XP_004000671.1| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit isoform
2 [Felis catus]
Length = 1036
Score = 46.2 bits (108), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 62/155 (40%), Gaps = 21/155 (13%)
Query: 251 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 310
++ LG + + G+LQ +I L + P+ D NL A +GDME + + +
Sbjct: 82 YSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAY----- 136
Query: 311 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 370
+ + Y L C + G L + AK C L A++ P
Sbjct: 137 ------VSALQYNPDLYC----------VRSDLGNLLKALGRLEEAKACYLKAIETQPNF 180
Query: 371 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 405
A W+NL + G+ + EKA L+PN +
Sbjct: 181 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL 215
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 129/330 (39%), Gaps = 67/330 (20%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
LEE + +++++ AV W+ LG + G + +I + +DPN D
Sbjct: 162 RLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLD----- 216
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL- 347
AY G++ + A+ F + AA + AL L +V+ G AC+
Sbjct: 217 --AYINLGNVLKEARIFDRAV-------AAYLR--ALSLSPNHAVV------HGNLACVY 259
Query: 348 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 407
+ +++A + A++ P + NLANA G + C A +L P
Sbjct: 260 YEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPT---- 315
Query: 408 RYAVAVSRIKDAERSQ--------------EPTEQLSWAGNEMASILREGDPVQIEPPIA 453
+A +++ + + +R Q E + + A + +AS+L++ +Q A
Sbjct: 316 -HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQ----EA 370
Query: 454 WAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKAD 513
+ + A A+ N L +M++ G A +C A++ +
Sbjct: 371 LMHYKEAIRISPTFADAYSNMGNTLKEMQDVQG---------------ALQCYTRAIQIN 415
Query: 514 PKAAHIWANLANAYYLTGDHRSSGKCLEKV 543
P A +NLA+ H+ SG E +
Sbjct: 416 PAFADAHSNLASI------HKDSGNIPEAI 439
>gi|118365491|ref|XP_001015966.1| TPR Domain containing protein [Tetrahymena thermophila]
gi|89297733|gb|EAR95721.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
Length = 3373
Score = 46.2 bits (108), Expect = 0.048, Method: Composition-based stats.
Identities = 44/168 (26%), Positives = 70/168 (41%), Gaps = 21/168 (12%)
Query: 150 ARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLR-CEADIARPELLSLVQIHHA 208
++ KN +A F Y G + + Y K+ E L + CE P A
Sbjct: 182 SKSESKNVNAEFK---AYFHRGNCYRQIKEYNKSIEDLQKACEIKKDNPP---------A 229
Query: 209 QCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSI 268
Q L S +N L E+ L+K + ++ D +A +N L L G+L S+
Sbjct: 230 QNNLGLSYFENQL--------YEQALAKFQNAIDLDDSKATYYNNKALALYHLGQLDFSL 281
Query: 269 SVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHP 316
+V + + VDPN+ + N G Y G +Q+ + F I N+P
Sbjct: 282 TVYNKAIEVDPNDARTLYNRGNTYLALGQNKQAHEDFDSAIRLSPNNP 329
>gi|158293248|ref|XP_314563.4| AGAP010599-PA [Anopheles gambiae str. PEST]
gi|157016867|gb|EAA09887.4| AGAP010599-PA [Anopheles gambiae str. PEST]
Length = 663
Score = 46.2 bits (108), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 73/170 (42%), Gaps = 12/170 (7%)
Query: 159 AHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARP--ELLSLVQIHHAQCLLPESS 216
AH +G Y L +A +Y KA+ +L + A+P + + +H L +
Sbjct: 132 AHINVGRTYNHLKMFKEAEQAYLKAKSLLPK-----AKPGESYQARIAPNHLNVFLNLA- 185
Query: 217 GDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLA 276
N + K E ++L + SM+SD QA + G IL+K R + + V L
Sbjct: 186 --NLISKNATRLEEADLLYRQAISMRSDYTQAYI--NRGDILIKLNRTKEAQEVYERALL 241
Query: 277 VDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL 326
D N D NLG+ + + G Q+ + D H AL+N A LL
Sbjct: 242 YDSTNPDIYYNLGVVFLEQGKASQALAYLDKALEFDPEHEQALLNSAILL 291
>gi|118089398|ref|XP_001232519.1| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit isoform
1 [Gallus gallus]
Length = 1035
Score = 46.2 bits (108), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 62/155 (40%), Gaps = 21/155 (13%)
Query: 251 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 310
++ LG + + G+LQ +I L + P+ D NL A +GDME + + +
Sbjct: 82 YSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAY----- 136
Query: 311 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 370
+ + Y L C + G L + AK C L A++ P
Sbjct: 137 ------VSALQYNPDLYC----------VRSDLGNLLKALGRLEEAKACYLKAIETQPNF 180
Query: 371 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 405
A W+NL + G+ + EKA L+PN +
Sbjct: 181 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL 215
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 130/330 (39%), Gaps = 67/330 (20%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
LEE + +++++ AV W+ LG + G + +I + +DPN D
Sbjct: 162 RLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLD----- 216
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL- 347
AY G++ + A+ F + AA + AL L +V+ G AC+
Sbjct: 217 --AYINLGNVLKEARIFDRAV-------AAYLR--ALSLSPNHAVV------HGNLACVY 259
Query: 348 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 407
+ +++A + A++ P + NLANA G + +C A +L P
Sbjct: 260 YEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEECYNTALRLCPT---- 315
Query: 408 RYAVAVSRIKDAERSQ--------------EPTEQLSWAGNEMASILREGDPVQIEPPIA 453
+A +++ + + +R Q E + + A + +AS+L++ +Q A
Sbjct: 316 -HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQ----EA 370
Query: 454 WAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKAD 513
+ + A A+ N L +M++ G A +C A++ +
Sbjct: 371 LMHYKEAIRISPTFADAYSNMGNTLKEMQDVQG---------------ALQCYTRAIQIN 415
Query: 514 PKAAHIWANLANAYYLTGDHRSSGKCLEKV 543
P A +NLA+ H+ SG E +
Sbjct: 416 PAFADAHSNLASI------HKDSGNIPEAI 439
>gi|405375533|ref|ZP_11029563.1| TPR repeat protein [Chondromyces apiculatus DSM 436]
gi|397086260|gb|EJJ17390.1| TPR repeat protein [Myxococcus sp. (contaminant ex DSM 436)]
Length = 271
Score = 46.2 bits (108), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 74/165 (44%), Gaps = 14/165 (8%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 213
P +AHAH L +Y A+S Y A + L E+ A L + H + +
Sbjct: 42 PSSAHAHDNLATVYAEKKLFRDALSEYLTA--LKLEPESATAHYNLACFLSTHAGEMAVE 99
Query: 214 ESSGDNSLDKELEPEEL------------EEILSKLKESMQSDTRQAVVWNTLGLILLKS 261
E LD E L EE + +L+ +++ D++ A + L +++
Sbjct: 100 EYKEAIELDPEYPDAHLNLGLTYADQGRVEEAMRELQTAIELDSQDAFPRHELAALMMDE 159
Query: 262 GRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQ 306
G +S+I+ L ++ ++P+N + +LGI Y Q G ++ + ++
Sbjct: 160 GDYRSAITQLKEVVRLEPDNFEAQLDLGICYAQKGFYAEAERAYE 204
>gi|395546237|ref|XP_003774996.1| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit
[Sarcophilus harrisii]
Length = 1075
Score = 46.2 bits (108), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 62/155 (40%), Gaps = 21/155 (13%)
Query: 251 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 310
++ LG + + G+LQ +I L + P+ D NL A +GDME + + +
Sbjct: 122 YSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAY----- 176
Query: 311 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 370
+ + Y L C + G L + AK C L A++ P
Sbjct: 177 ------VSALQYNPDLYC----------VRSDLGNLLKALGRLEEAKACYLKAIETQPNF 220
Query: 371 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 405
A W+NL + G+ + EKA L+PN +
Sbjct: 221 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL 255
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 129/330 (39%), Gaps = 67/330 (20%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
LEE + +++++ AV W+ LG + G + +I + +DPN D
Sbjct: 202 RLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLD----- 256
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL- 347
AY G++ + A+ F + AA + AL L +V+ G AC+
Sbjct: 257 --AYINLGNVLKEARIFDRAV-------AAYLR--ALSLSPNHAVV------HGNLACVY 299
Query: 348 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 407
+ +++A + A++ P + NLANA G + C A +L P
Sbjct: 300 YEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPT---- 355
Query: 408 RYAVAVSRIKDAERSQ--------------EPTEQLSWAGNEMASILREGDPVQIEPPIA 453
+A +++ + + +R Q E + + A + +AS+L++ +Q A
Sbjct: 356 -HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQ----EA 410
Query: 454 WAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKAD 513
+ + A A+ N L +M++ G A +C A++ +
Sbjct: 411 LMHYKEAIRISPTFADAYSNMGNTLKEMQDVQG---------------ALQCYTRAIQIN 455
Query: 514 PKAAHIWANLANAYYLTGDHRSSGKCLEKV 543
P A +NLA+ H+ SG E +
Sbjct: 456 PAFADAHSNLASI------HKDSGNIPEAI 479
>gi|340503702|gb|EGR30238.1| hypothetical protein IMG5_137130 [Ichthyophthirius multifiliis]
Length = 489
Score = 46.2 bits (108), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 79/187 (42%), Gaps = 18/187 (9%)
Query: 159 AHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESSGD 218
H L +Y RL QP+ A+ Y+K L + +I +L + +I+ L +SS
Sbjct: 247 THLQLAKVYIRLNQPITAIECYKKG---LQKHPQEIQF--ILGIARIYDQLVLSLDSSNM 301
Query: 219 NSLDKEL-------EPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVL 271
S+ + +PE + +L +Q QA +WN L L L G+ S
Sbjct: 302 ESVAQLAANQFYIDQPEVSTKFYQRL---LQLGINQAELWNNLALCLFYDGQYDLFYSCF 358
Query: 272 SS--LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCK 329
+LA + N D N+ + G+ + +C + I D +HP A N +L K
Sbjct: 359 EKALMLADESNKADIWYNISHVFINLGETGMAYQCLKIAICFDPHHPEAY-NNLGILEIK 417
Query: 330 YGSVLAG 336
G++ G
Sbjct: 418 KGNIEKG 424
>gi|410914070|ref|XP_003970511.1| PREDICTED: LOW QUALITY PROTEIN: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit-like
[Takifugu rubripes]
Length = 1036
Score = 46.2 bits (108), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 62/155 (40%), Gaps = 21/155 (13%)
Query: 251 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 310
++ LG + + G+LQ +I L + P+ D NL A +GDME + + +
Sbjct: 82 YSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAY----- 136
Query: 311 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 370
+ + Y L C + G L + AK C L A++ P
Sbjct: 137 ------VSALQYNPDLYC----------VRSDLGNLLKALGRLEEAKACYLKAIETQPNF 180
Query: 371 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 405
A W+NL + G+ + EKA L+PN +
Sbjct: 181 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL 215
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 88/422 (20%), Positives = 161/422 (38%), Gaps = 84/422 (19%)
Query: 151 RKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQC 210
++ P A A+ LG +Y+ GQ +A+ Y A LR + D I+ A
Sbjct: 73 KQNPMLAEAYSNLGNVYKERGQLQEAIEHYRHA----LRLKPDFIDG------YINLAAA 122
Query: 211 LLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISV 270
L+ ++GD +E + ++Q + V + LG +L GRL+ + +
Sbjct: 123 LV--AAGD-----------MEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKAC 169
Query: 271 LSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKY 330
+ PN NLG + G++ + F+ + D N A IN +L K
Sbjct: 170 YLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVL--KE 227
Query: 331 GSVLAGAGANT--------------GEGACL-DQASAVNVAKECLLAALKADPKAAHIWA 375
+ A A G AC+ + +++A + A++ P +
Sbjct: 228 ARIFDRAVAGYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYC 287
Query: 376 NLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQ------------ 423
NLANA G+ + +C A +L P +A +++ + + +R Q
Sbjct: 288 NLANALKEKGNVSEAEECYNTALRLCPT-----HADSLNNLANIKREQGNIEEAIQLYRK 342
Query: 424 --EPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFAAVQKTHHEVAAAFETEENELSKM 481
E + + A + +AS+L++ +Q A + + A A+ N L +M
Sbjct: 343 ALEVFPEFAAAHSNLASVLQQQGKLQ----EALMHYKEAIRISPTFADAYSNMGNTLKEM 398
Query: 482 EECAGAGESAFLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLE 541
++ G A +C A++ +P A +NLA+ H+ SG E
Sbjct: 399 QDVQG---------------ALQCYTRAIQINPAFADAHSNLASI------HKDSGNIPE 437
Query: 542 KV 543
+
Sbjct: 438 AI 439
>gi|344282024|ref|XP_003412775.1| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit isoform
2 [Loxodonta africana]
Length = 1036
Score = 46.2 bits (108), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 62/155 (40%), Gaps = 21/155 (13%)
Query: 251 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 310
++ LG + + G+LQ +I L + P+ D NL A +GDME + + +
Sbjct: 82 YSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAY----- 136
Query: 311 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 370
+ + Y L C + G L + AK C L A++ P
Sbjct: 137 ------VSALQYNPDLYC----------VRSDLGNLLKALGRLEEAKACYLKAIETQPNF 180
Query: 371 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 405
A W+NL + G+ + EKA L+PN +
Sbjct: 181 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL 215
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 129/330 (39%), Gaps = 67/330 (20%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
LEE + +++++ AV W+ LG + G + +I + +DPN D
Sbjct: 162 RLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLD----- 216
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL- 347
AY G++ + A+ F + AA + AL L +V+ G AC+
Sbjct: 217 --AYINLGNVLKEARIFDRAV-------AAYLR--ALSLSPNHAVV------HGNLACVY 259
Query: 348 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 407
+ +++A + A++ P + NLANA G + C A +L P
Sbjct: 260 YEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPT---- 315
Query: 408 RYAVAVSRIKDAERSQ--------------EPTEQLSWAGNEMASILREGDPVQIEPPIA 453
+A +++ + + +R Q E + + A + +AS+L++ +Q A
Sbjct: 316 -HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQ----EA 370
Query: 454 WAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKAD 513
+ + A A+ N L +M++ G A +C A++ +
Sbjct: 371 LMHYKEAIRISPTFADAYSNMGNTLKEMQDVQG---------------ALQCYTRAIQIN 415
Query: 514 PKAAHIWANLANAYYLTGDHRSSGKCLEKV 543
P A +NLA+ H+ SG E +
Sbjct: 416 PAFADAHSNLASI------HKDSGNIPEAI 439
>gi|50423773|ref|XP_460471.1| DEHA2F02464p [Debaryomyces hansenii CBS767]
gi|49656140|emb|CAG88778.1| DEHA2F02464p [Debaryomyces hansenii CBS767]
Length = 708
Score = 46.2 bits (108), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 74/183 (40%), Gaps = 35/183 (19%)
Query: 250 VWNTLGLILLKSGRLQSSISVLSSLLAVDPN---NCDCIGNLGIAYFQSGDMEQSAKCFQ 306
+W+ +G++ + G L+ + +L +DPN + + LGI Y G ++ + +CFQ
Sbjct: 152 LWHGIGILYDRYGSLEYAEEAFVRVLELDPNFDKSNEIYFRLGIIYKHQGKLQSALECFQ 211
Query: 307 DLILKDQNHPAALIN---------------------YAALLLC--KYGSVLAGAG----- 338
IL + HP + Y +L ++ VL G
Sbjct: 212 -YILTNPPHPLTQPDVWFQIGSVLEQQKDWNGAKEAYEKVLQVNPQHAKVLQQLGCLYSQ 270
Query: 339 ---ANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLE 395
A +G +N+A + LL +L+ D AH W L + + GD ++ + +
Sbjct: 271 AEPAPSGNSNQQPFQQDLNIALKYLLQSLEIDQSDAHSWYYLGRVHMIRGDFNAAYEAFQ 330
Query: 396 KAA 398
+A
Sbjct: 331 QAV 333
>gi|74007686|ref|XP_538075.2| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit isoform
1 [Canis lupus familiaris]
Length = 1036
Score = 46.2 bits (108), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 62/155 (40%), Gaps = 21/155 (13%)
Query: 251 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 310
++ LG + + G+LQ +I L + P+ D NL A +GDME + + +
Sbjct: 82 YSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAY----- 136
Query: 311 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 370
+ + Y L C + G L + AK C L A++ P
Sbjct: 137 ------VSALQYNPDLYC----------VRSDLGNLLKALGRLEEAKACYLKAIETQPNF 180
Query: 371 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 405
A W+NL + G+ + EKA L+PN +
Sbjct: 181 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL 215
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 129/330 (39%), Gaps = 67/330 (20%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
LEE + +++++ AV W+ LG + G + +I + +DPN D
Sbjct: 162 RLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLD----- 216
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL- 347
AY G++ + A+ F + AA + AL L +V+ G AC+
Sbjct: 217 --AYINLGNVLKEARIFDRAV-------AAYLR--ALSLSPNHAVV------HGNLACVY 259
Query: 348 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 407
+ +++A + A++ P + NLANA G + C A +L P
Sbjct: 260 YEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPT---- 315
Query: 408 RYAVAVSRIKDAERSQ--------------EPTEQLSWAGNEMASILREGDPVQIEPPIA 453
+A +++ + + +R Q E + + A + +AS+L++ +Q A
Sbjct: 316 -HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQ----EA 370
Query: 454 WAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKAD 513
+ + A A+ N L +M++ G A +C A++ +
Sbjct: 371 LMHYKEAIRISPTFADAYSNMGNTLKEMQDVQG---------------ALQCYTRAIQIN 415
Query: 514 PKAAHIWANLANAYYLTGDHRSSGKCLEKV 543
P A +NLA+ H+ SG E +
Sbjct: 416 PAFADAHSNLASI------HKDSGNIPEAI 439
>gi|337286267|ref|YP_004625740.1| hypothetical protein Thein_0899 [Thermodesulfatator indicus DSM
15286]
gi|335359095|gb|AEH44776.1| Tetratricopeptide TPR_1 repeat-containing protein
[Thermodesulfatator indicus DSM 15286]
Length = 561
Score = 46.2 bits (108), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 119/294 (40%), Gaps = 51/294 (17%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPE--LLSL-VQIHH--- 207
P A+ ++L+G + G + S KA E ++RC+ P+ LL + +Q+
Sbjct: 32 PAEAYYYYLVGEQFLLQGN----LVSARKALERVVRCDPKALTPQKDLLKIYIQMRQYEK 87
Query: 208 ----AQCLLPESSGDNSLDKEL--------EPEELEEILSKLKESMQSDTRQAVVWNTLG 255
AQ +L ES GD L P E L KL ++ D A + L
Sbjct: 88 AISLAQKILKESPGDKDTLFLLARAYWFQQRPLRAAETLEKL---LEKDPNNAEALSILT 144
Query: 256 LILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNH 315
I L+ +L+ +I VL L +P N L Y + GD +Q+ K + + + ++
Sbjct: 145 SIYLEQNKLEKAIKVLERLAKKNPENPVIYLELARVYRKKGDFDQARKYYSKALKLEPDN 204
Query: 316 PAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWA 375
L+ Y G L++ A A++ AL +P+ H++
Sbjct: 205 LKILLEY---------------------GDFLEKIGAFKEAQKIYEEALAQNPEQFHLYE 243
Query: 376 NLANAYYLTGDHRSSGKCLEKAAKL---EPNCMSTR--YAVAVSRIKDAERSQE 424
L Y + + + + + K +L P + + + ++R K+AE++ E
Sbjct: 244 ALLKLYVNSNEFEKALELINKLEELVGERPQLLFRKALLLMDLNREKEAEKALE 297
>gi|428315765|ref|YP_007113647.1| Tetratricopeptide TPR_1 repeat-containing protein [Oscillatoria
nigro-viridis PCC 7112]
gi|428239445|gb|AFZ05231.1| Tetratricopeptide TPR_1 repeat-containing protein [Oscillatoria
nigro-viridis PCC 7112]
Length = 1290
Score = 46.2 bits (108), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 92/224 (41%), Gaps = 37/224 (16%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
+++E ++ +++++ + TLG L G+ +++I S L + PN + N+
Sbjct: 492 KIKEAIAACQQALKIRPDFIYAYVTLGNALQAEGKTEAAIRSYSQALVLQPNFAEVRANI 551
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLD 348
G YF+ G +E++ +Q I + LAGA N G+
Sbjct: 552 GSMYFKMGRLEEAIAHYQQAIALSPD-------------------LAGAHWNLGK--VYH 590
Query: 349 QASAVNVAKECLLAALKADPK--AAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMS 406
Q + A C + +P+ A NL N + G + +C EKA ++P+
Sbjct: 591 QHGNIEAAIACFKRTSELNPQLVGADFHFNLGNRLFSQGKRDEAIECYEKAIAIKPD--- 647
Query: 407 TRYAVAVSRIKDAERSQEPTEQLSWAGNEMASILREGDPVQIEP 450
+A A I A RSQ+ GN A+I V ++P
Sbjct: 648 --WAEAYGNIGSA-RSQQ--------GNLEAAIAYYQKAVALKP 680
>gi|348516828|ref|XP_003445939.1| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit isoform
4 [Oreochromis niloticus]
Length = 1054
Score = 46.2 bits (108), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 62/155 (40%), Gaps = 21/155 (13%)
Query: 251 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 310
++ LG + + G+LQ +I L + P+ D NL A +GDME + + +
Sbjct: 82 YSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAY----- 136
Query: 311 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 370
+ + Y L C + G L + AK C L A++ P
Sbjct: 137 ------VSALQYNPDLYC----------VRSDLGNLLKALGRLEEAKACYLKAIETQPNF 180
Query: 371 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 405
A W+NL + G+ + EKA L+PN +
Sbjct: 181 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL 215
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 88/422 (20%), Positives = 161/422 (38%), Gaps = 84/422 (19%)
Query: 151 RKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQC 210
++ P A A+ LG +Y+ GQ +A+ Y A LR + D I+ A
Sbjct: 73 KQNPMLAEAYSNLGNVYKERGQLQEAIEHYRHA----LRLKPDFIDG------YINLAAA 122
Query: 211 LLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISV 270
L+ ++GD +E + ++Q + V + LG +L GRL+ + +
Sbjct: 123 LV--AAGD-----------MEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKAC 169
Query: 271 LSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKY 330
+ PN NLG + G++ + F+ + D N A IN +L K
Sbjct: 170 YLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVL--KE 227
Query: 331 GSVLAGAGANT--------------GEGACL-DQASAVNVAKECLLAALKADPKAAHIWA 375
+ A A G AC+ + +++A + A++ P +
Sbjct: 228 ARIFDRAVAGYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYC 287
Query: 376 NLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQ------------ 423
NLANA G+ + +C A +L P +A +++ + + +R Q
Sbjct: 288 NLANALKEKGNVSEAEECYNTALRLCPT-----HADSLNNLANIKREQGYIEEAVQLYRK 342
Query: 424 --EPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFAAVQKTHHEVAAAFETEENELSKM 481
E + + A + +AS+L++ +Q A + + A A+ N L +M
Sbjct: 343 ALEVFPEFAAAHSNLASVLQQQGKLQ----EALMHYKEAIRISPTFADAYSNMGNTLKEM 398
Query: 482 EECAGAGESAFLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLE 541
++ G A +C A++ +P A +NLA+ H+ SG E
Sbjct: 399 QDVQG---------------ALQCYTRAIQINPAFADAHSNLASI------HKDSGNIPE 437
Query: 542 KV 543
+
Sbjct: 438 AI 439
>gi|66347879|ref|NP_001018117.1| O-linked N-acetylglucosamine transferase isoform 4 [Danio rerio]
gi|56967378|gb|AAW31873.1| O-GlcNAc transferase variant 4 [Danio rerio]
Length = 1036
Score = 46.2 bits (108), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 62/155 (40%), Gaps = 21/155 (13%)
Query: 251 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 310
++ LG + + G+LQ +I L + P+ D NL A +GDME + + +
Sbjct: 82 YSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAY----- 136
Query: 311 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 370
+ + Y L C + G L + AK C L A++ P
Sbjct: 137 ------VSALQYNPDLYC----------VRSDLGNLLKALGRLEEAKACYLKAIETQPNF 180
Query: 371 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 405
A W+NL + G+ + EKA L+PN +
Sbjct: 181 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL 215
Score = 40.4 bits (93), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 88/422 (20%), Positives = 161/422 (38%), Gaps = 84/422 (19%)
Query: 151 RKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQC 210
++ P A A+ LG +Y+ GQ +A+ Y A LR + D I+ A
Sbjct: 73 KQNPMLAEAYSNLGNVYKERGQLQEAIEHYRHA----LRLKPDFIDG------YINLAAA 122
Query: 211 LLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISV 270
L+ ++GD +E + ++Q + V + LG +L GRL+ + +
Sbjct: 123 LV--AAGD-----------MEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKAC 169
Query: 271 LSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKY 330
+ PN NLG + G++ + F+ + D N A IN +L K
Sbjct: 170 YLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVL--KE 227
Query: 331 GSVLAGAGANT--------------GEGACL-DQASAVNVAKECLLAALKADPKAAHIWA 375
+ A A G AC+ + +++A + A++ P +
Sbjct: 228 ARIFDRAVAGYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYC 287
Query: 376 NLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQ------------ 423
NLANA G+ + +C A +L P +A +++ + + +R Q
Sbjct: 288 NLANALKEKGNVSEAEECYNTALRLCPT-----HADSLNNLANIKREQGNIEEAVQLYRK 342
Query: 424 --EPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFAAVQKTHHEVAAAFETEENELSKM 481
E + + A + +AS+L++ +Q A + + A A+ N L +M
Sbjct: 343 ALEVFPEFAAAHSNLASVLQQQGKLQ----EALMHYKEAIRISPTFADAYSNMGNTLKEM 398
Query: 482 EECAGAGESAFLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLE 541
++ G A +C A++ +P A +NLA+ H+ SG E
Sbjct: 399 QDVQG---------------ALQCYTRAIQINPAFADAHSNLASI------HKDSGNIPE 437
Query: 542 KV 543
+
Sbjct: 438 AI 439
>gi|332265872|ref|XP_003281937.1| PREDICTED: LOW QUALITY PROTEIN: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit
[Nomascus leucogenys]
Length = 1050
Score = 46.2 bits (108), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 62/155 (40%), Gaps = 21/155 (13%)
Query: 251 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 310
++ LG + + G+LQ +I L + P+ D NL A +GDME + + +
Sbjct: 92 YSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAY----- 146
Query: 311 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 370
+ + Y L C + G L + AK C L A++ P
Sbjct: 147 ------VSALQYNPDLYC----------VRSDLGNLLKALGRLEEAKACYLKAIETQPNF 190
Query: 371 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 405
A W+NL + G+ + EKA L+PN +
Sbjct: 191 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL 225
>gi|307197899|gb|EFN78998.1| Transmembrane and TPR repeat-containing protein CG4050
[Harpegnathos saltator]
Length = 982
Score = 46.2 bits (108), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 90/226 (39%), Gaps = 38/226 (16%)
Query: 159 AHFLLGLMYQRLGQPLKAVSSYEKAEEILLRC------EADIARPELLSLVQIHHAQCLL 212
AH +G Y L +A +Y KA+ +L + +A IA L V +
Sbjct: 483 AHINVGRTYNHLKMFKEAEDAYLKAKSLLPKAKPGESYQARIAPNHLNVFVNL------- 535
Query: 213 PESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLS 272
N + K E ++L + SM++D QA + G +L+K R + + V
Sbjct: 536 -----ANLIAKNATRLEEADLLYRQAISMRADYTQAYI--NRGDVLIKLNRTKEAQEVYE 588
Query: 273 SLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGS 332
L D NN D NLG+ + + G Q+ + D H AL+N +A+LL + G
Sbjct: 589 RALFYDSNNPDIYYNLGVVFLEQGKASQALAYLDKALEFDPEHEQALLN-SAILLQELG- 646
Query: 333 VLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLA 378
+A VA+E LL L+ D + NL
Sbjct: 647 ----------------RAELRKVARERLLKLLRKDSNNERVHFNLG 676
>gi|126342737|ref|XP_001362233.1| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit isoform
1 [Monodelphis domestica]
Length = 1045
Score = 46.2 bits (108), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 62/155 (40%), Gaps = 21/155 (13%)
Query: 251 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 310
++ LG + + G+LQ +I L + P+ D NL A +GDME + + +
Sbjct: 92 YSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAY----- 146
Query: 311 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 370
+ + Y L C + G L + AK C L A++ P
Sbjct: 147 ------VSALQYNPDLYC----------VRSDLGNLLKALGRLEEAKACYLKAIETQPNF 190
Query: 371 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 405
A W+NL + G+ + EKA L+PN +
Sbjct: 191 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL 225
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 129/330 (39%), Gaps = 67/330 (20%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
LEE + +++++ AV W+ LG + G + +I + +DPN D
Sbjct: 172 RLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLD----- 226
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL- 347
AY G++ + A+ F + AA + AL L +V+ G AC+
Sbjct: 227 --AYINLGNVLKEARIFDRAV-------AAYLR--ALSLSPNHAVV------HGNLACVY 269
Query: 348 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 407
+ +++A + A++ P + NLANA G + C A +L P
Sbjct: 270 YEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPT---- 325
Query: 408 RYAVAVSRIKDAERSQ--------------EPTEQLSWAGNEMASILREGDPVQIEPPIA 453
+A +++ + + +R Q E + + A + +AS+L++ +Q A
Sbjct: 326 -HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQ----EA 380
Query: 454 WAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKAD 513
+ + A A+ N L +M++ G A +C A++ +
Sbjct: 381 LMHYKEAIRISPTFADAYSNMGNTLKEMQDVQG---------------ALQCYTRAIQIN 425
Query: 514 PKAAHIWANLANAYYLTGDHRSSGKCLEKV 543
P A +NLA+ H+ SG E +
Sbjct: 426 PAFADAHSNLASI------HKDSGNIPEAI 449
>gi|407772277|ref|ZP_11119579.1| hypothetical protein TH2_00220 [Thalassospira profundimaris WP0211]
gi|407284230|gb|EKF09746.1| hypothetical protein TH2_00220 [Thalassospira profundimaris WP0211]
Length = 680
Score = 45.8 bits (107), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 63/162 (38%), Gaps = 13/162 (8%)
Query: 258 LLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPA 317
L+ G + + L+ P + LG Y +S + ++ KC + I D+N
Sbjct: 68 LIDQGEFAKGVELARQLVEYAPESAQIWNLLGFGYAKSQNPVEAEKCLRKAIEIDKNFGM 127
Query: 318 ALINYAALLLCKYGSVLA-------------GAGANTGEGACLDQASAVNVAKECLLAAL 364
A +N L + LA AG + L + + A++ + A+
Sbjct: 128 AWVNIGKLFSTQNKWDLALQAFQNASYIEPQNAGVLSSIAGILVEMRRFDEAEKFCVMAI 187
Query: 365 KADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMS 406
K DP A + NL Y ++ + EK A+L PN M+
Sbjct: 188 KYDPNLAEPYLNLGIILYRKKKRGAAKQAFEKVAQLRPNNMT 229
>gi|255603246|ref|XP_002538013.1| o-linked n-acetylglucosamine transferase, ogt, putative [Ricinus
communis]
gi|223514189|gb|EEF24370.1| o-linked n-acetylglucosamine transferase, ogt, putative [Ricinus
communis]
Length = 259
Score = 45.8 bits (107), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 49/257 (19%), Positives = 107/257 (41%), Gaps = 45/257 (17%)
Query: 60 ELSRLTNEDSNHSSSH--HDKGSILMSKEMDVAEVEGKKINKLGKC-----RSRISSKMD 112
+L+ L ++H + K L +K+ + ++ + + +G+ R R ++K D
Sbjct: 24 QLANLHMRTQQFKAAHECYKKAIALDAKQAQLYYLDARALKNMGRTQEAILRLRTATKFD 83
Query: 113 ----SALEFGVDADGDQSGLGTSSSSREEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQ 168
A VD L + E+ + L+ + P++AH H+ LG++ Q
Sbjct: 84 PQQSQAFSECVD-------LMLQAQQPEQAANMLRQAVA----AHPEHAHFHYRLGVLCQ 132
Query: 169 RLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPE 228
+L +A+ ++A I + D A + +H + L+ + G
Sbjct: 133 QLQATDEALQCMQQAINI----QPDFA--------EAYHQRALMLQLQG----------- 169
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
+ + L ++ V +N G++L + G+ ++I+ L ++P NL
Sbjct: 170 QTQAALDSFNGAIHYQPNLPVPYNNRGVVLCQLGQYPAAITDFRQALQLNPGYASAYCNL 229
Query: 289 GIAYFQSGDMEQSAKCF 305
G+A +++GD +++ C
Sbjct: 230 GLALYENGDTDEAYSCL 246
>gi|354567262|ref|ZP_08986432.1| Tetratricopeptide TPR_1 repeat-containing protein [Fischerella sp.
JSC-11]
gi|353543563|gb|EHC13021.1| Tetratricopeptide TPR_1 repeat-containing protein [Fischerella sp.
JSC-11]
Length = 224
Score = 45.8 bits (107), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 51/94 (54%), Gaps = 2/94 (2%)
Query: 225 LEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDC 284
E+ +E + + +E+++ D++ A+ N +GL+ + + +I+ + LA++PN D
Sbjct: 109 FRQEKKDEAIKQYQEAIRLDSKYALAHNGIGLVFASQEQWEEAIAEYNKALAINPNYGDA 168
Query: 285 IGNLGIAYFQSGDMEQSAKCFQDLI--LKDQNHP 316
+ NL A+++ G E++ + + K QN P
Sbjct: 169 LTNLAQAFWEVGKREEAIASLEKALSAFKAQNKP 202
>gi|385203261|ref|ZP_10030131.1| Flp pilus assembly protein TadD [Burkholderia sp. Ch1-1]
gi|385183152|gb|EIF32426.1| Flp pilus assembly protein TadD [Burkholderia sp. Ch1-1]
Length = 596
Score = 45.8 bits (107), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 47/99 (47%)
Query: 228 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 287
E E + ++ D R+ + LG++LLK+GR Q + SV +L ++P +C+
Sbjct: 149 ERFPEAEPYCRRALLLDARRERAQHNLGMVLLKTGRHQEAQSVFRRVLELEPEHCEACNG 208
Query: 288 LGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL 326
L +A + E++ + + D H A N A +L
Sbjct: 209 LAVALMKDYRYEEAESFVRRALNLDPEHRVATRNLAHIL 247
>gi|357634577|ref|ZP_09132455.1| Tetratricopeptide TPR_1 repeat-containing protein [Desulfovibrio
sp. FW1012B]
gi|357583131|gb|EHJ48464.1| Tetratricopeptide TPR_1 repeat-containing protein [Desulfovibrio
sp. FW1012B]
Length = 206
Score = 45.8 bits (107), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 45/97 (46%)
Query: 230 LEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLG 289
L + + L++ Q + A W LG + + + + +I+ L +DP D + + G
Sbjct: 67 LADRVKALEKQTQLEPANAAAWTELGNLYFDTEQPEKAITAYEKALTLDPKQPDVLTDQG 126
Query: 290 IAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL 326
+ Y Q G +++ +CF I + H A N + +L
Sbjct: 127 VMYRQVGKFDKALECFNKAIAINPGHIIAQFNKSVVL 163
>gi|171060749|ref|YP_001793098.1| type 12 methyltransferase [Leptothrix cholodnii SP-6]
gi|170778194|gb|ACB36333.1| Methyltransferase type 12 [Leptothrix cholodnii SP-6]
Length = 456
Score = 45.8 bits (107), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 44/90 (48%)
Query: 235 SKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQ 294
S ++++ D R N LGL+ G L S+I + + P N + LGI Y+
Sbjct: 150 SHYEQALAIDPRHVNAHNNLGLLHAARGDLASAIRCYCQAIELMPGNSEGRKLLGITYYT 209
Query: 295 SGDMEQSAKCFQDLILKDQNHPAALINYAA 324
G + ++A+ F+ + + +HP A YA+
Sbjct: 210 VGKIAEAAEVFRQWLADEPDHPVARHMYAS 239
>gi|312372803|gb|EFR20681.1| hypothetical protein AND_19668 [Anopheles darlingi]
Length = 996
Score = 45.8 bits (107), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 73/170 (42%), Gaps = 12/170 (7%)
Query: 159 AHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARP--ELLSLVQIHHAQCLLPESS 216
AH +G Y L +A +Y KA+ +L + A+P + + +H L +
Sbjct: 175 AHINVGRTYNHLKMFKEAEMAYLKAKSLLPK-----AKPGESYQARIAPNHLNVFLNLA- 228
Query: 217 GDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLA 276
N + K E ++L + SM+SD QA + G IL+K R + + V L
Sbjct: 229 --NLISKNATRLEEADLLYRQAISMRSDYTQAYI--NRGDILIKLNRTKEAQEVYERALL 284
Query: 277 VDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL 326
D N D NLG+ + + G Q+ + D H AL+N A LL
Sbjct: 285 YDSANPDIYYNLGVVFLEQGKASQALAYLDKALEFDPEHEQALLNSAILL 334
>gi|118349087|ref|XP_001033420.1| TPR Domain containing protein [Tetrahymena thermophila]
gi|89287769|gb|EAR85757.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
Length = 537
Score = 45.8 bits (107), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 103/267 (38%), Gaps = 35/267 (13%)
Query: 154 PKNAHAHFLLGLMYQRLGQPL-KAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLL 212
P ++ AHF LGL Y L Q L KA SY + +I P
Sbjct: 23 PFDSQAHFQLGLYY-LLSQRLEKAKQSYIEGLKI---------NPRF------------- 59
Query: 213 PESSGDNSLDKELEPEEL-EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVL 271
S G N+L + + EE L S++ + + +G I + +L+ + +
Sbjct: 60 --SQGHNNLGVIYQHMNMQEEALQCFLNSLEINPQDYQALMNIGNIYSEKNQLEEAKQWM 117
Query: 272 SSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYG 331
L ++P N DC NLG Y Q +++ + + L D + L+NY L C Y
Sbjct: 118 IKSLNINPKNKDCHLNLGTIYIQMKKYKEAEQSY--LRALDLDAQDFLVNYK--LGCLYS 173
Query: 332 SVL----AGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDH 387
VL + A G Q + K+ L L+ DPK + L N Y+
Sbjct: 174 EVLLINPSDIEAYFNLGQFYSQMNMFKEEKQSYLKILQIDPKYFQAYEKLGNLYFNMNML 233
Query: 388 RSSGKCLEKAAKLEPNCMSTRYAVAVS 414
+ + K+ L P + + + ++
Sbjct: 234 EDAKQNYLKSIDLNPQSAISYFNLGIT 260
>gi|383774716|ref|YP_005453785.1| hypothetical protein S23_64920 [Bradyrhizobium sp. S23321]
gi|381362843|dbj|BAL79673.1| hypothetical protein S23_64920 [Bradyrhizobium sp. S23321]
Length = 461
Score = 45.8 bits (107), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 92/227 (40%), Gaps = 27/227 (11%)
Query: 211 LLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISV 270
LL E+ GD L + L ++++ D + A + G++ RL +++
Sbjct: 115 LLREAGGD-----------LNRAAADLSKAIELDPQDAESYELRGVVYTNQRRLDRALAD 163
Query: 271 LSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKY 330
+ + P++ + G+ Y+ GD E++ + + + D N P + N A K
Sbjct: 164 YDQAIKLKPDDAQAWSDRGVTYYLGGDNEKAVRDLSEALRLDPNRPRSYTNRGA-AYKKL 222
Query: 331 GSVLAGAGANTGEGACLDQASAVNVAKECL-LAALKADPKA-------------AHIWAN 376
G L A A+ GE LD L LAA+ KA + + N
Sbjct: 223 GQ-LDKAVADDGEAIRLDPKVPEYYDNRGLSLAAMGEYDKAIADYDQALRLAPRPNFFTN 281
Query: 377 LANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQ 423
++Y+L G+ ++ E A KL+PN T AV K ER +
Sbjct: 282 RGDSYHLKGELGAALSDYESALKLDPNFAQTYNNRAVLYKKMGERRK 328
Score = 38.9 bits (89), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 81/221 (36%), Gaps = 15/221 (6%)
Query: 228 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 287
L+ L+ ++++ A W+ G+ G + ++ LS L +DPN N
Sbjct: 155 RRLDRALADYDQAIKLKPDDAQAWSDRGVTYYLGGDNEKAVRDLSEALRLDPNRPRSYTN 214
Query: 288 LGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL--LCKYGSVLAG--------- 336
G AY + G ++++ + I D P N L + +Y +A
Sbjct: 215 RGAAYKKLGQLDKAVADDGEAIRLDPKVPEYYDNRGLSLAAMGEYDKAIADYDQALRLAP 274
Query: 337 -AGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLE 395
T G + A +ALK DP A + N A Y G+ R + E
Sbjct: 275 RPNFFTNRGDSYHLKGELGAALSDYESALKLDPNFAQTYNNRAVLYKKMGERRKALADYE 334
Query: 396 KAAKLEP---NCMSTRYAVAVSRIKDAERSQEPTEQLSWAG 433
A +L+P N + R A+ K P +S +G
Sbjct: 335 TALRLDPGNDNAANGRRAMIAEIAKFGAEPLRPLNAVSGSG 375
>gi|126342739|ref|XP_001362317.1| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit isoform
2 [Monodelphis domestica]
Length = 1035
Score = 45.8 bits (107), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 62/155 (40%), Gaps = 21/155 (13%)
Query: 251 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 310
++ LG + + G+LQ +I L + P+ D NL A +GDME + + +
Sbjct: 82 YSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAY----- 136
Query: 311 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 370
+ + Y L C + G L + AK C L A++ P
Sbjct: 137 ------VSALQYNPDLYC----------VRSDLGNLLKALGRLEEAKACYLKAIETQPNF 180
Query: 371 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 405
A W+NL + G+ + EKA L+PN +
Sbjct: 181 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL 215
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 129/330 (39%), Gaps = 67/330 (20%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
LEE + +++++ AV W+ LG + G + +I + +DPN D
Sbjct: 162 RLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLD----- 216
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL- 347
AY G++ + A+ F + AA + AL L +V+ G AC+
Sbjct: 217 --AYINLGNVLKEARIFDRAV-------AAYLR--ALSLSPNHAVV------HGNLACVY 259
Query: 348 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 407
+ +++A + A++ P + NLANA G + C A +L P
Sbjct: 260 YEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPT---- 315
Query: 408 RYAVAVSRIKDAERSQ--------------EPTEQLSWAGNEMASILREGDPVQIEPPIA 453
+A +++ + + +R Q E + + A + +AS+L++ +Q A
Sbjct: 316 -HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQ----EA 370
Query: 454 WAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKAD 513
+ + A A+ N L +M++ G A +C A++ +
Sbjct: 371 LMHYKEAIRISPTFADAYSNMGNTLKEMQDVQG---------------ALQCYTRAIQIN 415
Query: 514 PKAAHIWANLANAYYLTGDHRSSGKCLEKV 543
P A +NLA+ H+ SG E +
Sbjct: 416 PAFADAHSNLASI------HKDSGNIPEAI 439
>gi|428184391|gb|EKX53246.1| hypothetical protein GUITHDRAFT_64500, partial [Guillardia theta
CCMP2712]
Length = 171
Score = 45.8 bits (107), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 44/93 (47%), Gaps = 1/93 (1%)
Query: 237 LKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSG 296
+ + Q + R + L +L + G+LQS+ S L + P+N +C+ NL I G
Sbjct: 25 FQRATQENPRDSRSLFGLATVLHRMGKLQSAESFYRKSLEIQPDNVECLTNLSILLDDEG 84
Query: 297 DMEQSAKCFQDLILKDQNHPAALINYAALLLCK 329
+E++ C + K+ L NY LLCK
Sbjct: 85 RLEEACCCMERAFTKNSRDLGVLSNYGH-LLCK 116
>gi|427416747|ref|ZP_18906930.1| tetratricopeptide repeat protein [Leptolyngbya sp. PCC 7375]
gi|425759460|gb|EKV00313.1| tetratricopeptide repeat protein [Leptolyngbya sp. PCC 7375]
Length = 286
Score = 45.8 bits (107), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 72/194 (37%), Gaps = 43/194 (22%)
Query: 255 GLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQN 314
G+I ++ G+L+ +IS S +A+DP NLG+AY + +M+ +A F D
Sbjct: 38 GVIHVQQGQLEDAISAFRSAVALDPTLAIAHYNLGLAYREQSEMQAAADAFWQATQADDQ 97
Query: 315 HPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASA---------------------- 352
A +N A LL +G LDQA +
Sbjct: 98 FTMAYVNLGAALL---------------DGGNLDQAESYLQRAVTLEPQLGIGHYNLGLV 142
Query: 353 ------VNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMS 406
+ VA + L A++ P+A + + Y + + LE A L+ N
Sbjct: 143 QRRQGKLPVALDSFLKAVEYSPQAPEVHYQIGLIYLQQNQLDGAVQALETAISLDSNYPE 202
Query: 407 TRYAVAVSRIKDAE 420
Y + ++ E
Sbjct: 203 AHYNLGITHFGRGE 216
>gi|295677297|ref|YP_003605821.1| hypothetical protein BC1002_2251 [Burkholderia sp. CCGE1002]
gi|295437140|gb|ADG16310.1| TPR repeat-containing protein [Burkholderia sp. CCGE1002]
Length = 628
Score = 45.8 bits (107), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 73/177 (41%), Gaps = 25/177 (14%)
Query: 254 LGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQ-DLILKD 312
LG L G++ ++I + L + P NLG AY G E +A F+ L L+
Sbjct: 88 LGNALKALGQIDAAIEQFRNALTLAPTFPMAHYNLGNAYASLGRHEDAADAFERSLRLQP 147
Query: 313 QN----------------HPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVA 356
++ H A+ ++ L + G AGA G L+ + A
Sbjct: 148 EDASSHNNLGNALHALGRHAEAIASFRRALELRPGH----AGALNNMGMSLNALDRPDEA 203
Query: 357 KECLLAALKADPK--AAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAV 411
C AAL +P+ AAH NLAN + TG H + E A +L+PN Y +
Sbjct: 204 VPCFEAALAVEPRFVAAHF--NLANTFDATGRHAQAVASFEAALRLQPNLPPAIYGM 258
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 104/271 (38%), Gaps = 48/271 (17%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 213
P AH+ LG Y LG+ A ++E++ LR + PE
Sbjct: 113 PTFPMAHYNLGNAYASLGRHEDAADAFERS----LRLQ-----PE--------------- 148
Query: 214 ESSGDNSLDKELEP-EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLS 272
++S N+L L E ++ + +++ A N +G+ L R ++
Sbjct: 149 DASSHNNLGNALHALGRHAEAIASFRRALELRPGHAGALNNMGMSLNALDRPDEAVPCFE 208
Query: 273 SLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGS 332
+ LAV+P NL + +G Q+ F+ + N P A+ G+
Sbjct: 209 AALAVEPRFVAAHFNLANTFDATGRHAQAVASFEAALRLQPNLPPAIYGM--------GN 260
Query: 333 VLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGK 392
LA G L++A + DP+ A W L A+ G H ++ +
Sbjct: 261 ALAALGRAEQALPYLERAVGL-------------DPQFALAWLALGTAHQALGAHAAAVR 307
Query: 393 CLEKAAKLEPNCMSTRY--AVAVSRIKDAER 421
L++A +L P+ S A+A ++D ER
Sbjct: 308 ALDQALRLRPDLASAHMNRALAWLAMRDFER 338
>gi|449499306|ref|XP_002189786.2| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit, partial
[Taeniopygia guttata]
Length = 1038
Score = 45.8 bits (107), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 62/155 (40%), Gaps = 21/155 (13%)
Query: 251 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 310
++ LG + + G+LQ +I L + P+ D NL A +GDME + + +
Sbjct: 85 YSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAY----- 139
Query: 311 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 370
+ + Y L C + G L + AK C L A++ P
Sbjct: 140 ------VSALQYNPDLYC----------VRSDLGNLLKALGRLEEAKACYLKAIETQPNF 183
Query: 371 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 405
A W+NL + G+ + EKA L+PN +
Sbjct: 184 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL 218
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 130/330 (39%), Gaps = 67/330 (20%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
LEE + +++++ AV W+ LG + G + +I + +DPN D
Sbjct: 165 RLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLD----- 219
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL- 347
AY G++ + A+ F + AA + AL L +V+ G AC+
Sbjct: 220 --AYINLGNVLKEARIFDRAV-------AAYLR--ALSLSPNHAVV------HGNLACVY 262
Query: 348 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 407
+ +++A + A++ P + NLANA G + +C A +L P
Sbjct: 263 YEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVVEAEECYNTALRLCPT---- 318
Query: 408 RYAVAVSRIKDAERSQ--------------EPTEQLSWAGNEMASILREGDPVQIEPPIA 453
+A +++ + + +R Q E + + A + +AS+L++ +Q A
Sbjct: 319 -HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQ----EA 373
Query: 454 WAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKAD 513
+ + A A+ N L +M++ G A +C A++ +
Sbjct: 374 LMHYKEAIRISPTFADAYSNMGNTLKEMQDVQG---------------ALQCYTRAIQIN 418
Query: 514 PKAAHIWANLANAYYLTGDHRSSGKCLEKV 543
P A +NLA+ H+ SG E +
Sbjct: 419 PAFADAHSNLASI------HKDSGNIPEAI 442
>gi|162147294|ref|YP_001601755.1| hypothetical protein GDI_1499 [Gluconacetobacter diazotrophicus PAl
5]
gi|161785871|emb|CAP55442.1| conserved hypothetical protein [Gluconacetobacter diazotrophicus
PAl 5]
Length = 232
Score = 45.8 bits (107), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 66/149 (44%), Gaps = 13/149 (8%)
Query: 254 LGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQ 313
LG I + G+ +S+I +L LA P N + LG+A +G E + CF+ +
Sbjct: 48 LGTIHARQGKFESAIPLLRRALARMPANAEGYNVLGMALRDAGQAEDAIACFRRAVAIRP 107
Query: 314 NHPAALINYAALLLCKYGSVLAGAGANTGEGACLD-QASAVNVAKECLLAALKADPKAAH 372
+H A N L+ G AGA A LD Q +A+ + AL ADP
Sbjct: 108 DHQGARTNLGNALVA--GGDRAGAIAQFRALLTLDTQLAAIADYRT----ALAADP---- 157
Query: 373 IWANLANAYYLTGDHRSSGKCLEKAAKLE 401
A++ L G R+ G+C E AA +
Sbjct: 158 --ADVETLIRLGGALRTIGRCEEAAAHFQ 184
>gi|448097087|ref|XP_004198585.1| Piso0_001965 [Millerozyma farinosa CBS 7064]
gi|359380007|emb|CCE82248.1| Piso0_001965 [Millerozyma farinosa CBS 7064]
Length = 720
Score = 45.8 bits (107), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 72/185 (38%), Gaps = 38/185 (20%)
Query: 250 VWNTLGLILLKSGRLQSSISVLSSLLAVDPN---NCDCIGNLGIAYFQSGDMEQSAKCFQ 306
+W+ +G++ + G L+ + +L +DPN + + LGI Y G ++ + +CFQ
Sbjct: 152 LWHGIGILYDRYGSLEYAEEAFVRVLELDPNFDKSNEIYFRLGIIYKHQGKLKSALECFQ 211
Query: 307 DLILKDQNHP---------------------AALINYAALLL-------------CKYGS 332
IL + HP +A Y +L C Y
Sbjct: 212 -YILNNPPHPLTQPDVWFQIGSVLEQQKDWNSAKEAYEKVLQVNPQHAKVLQQLGCLYSQ 270
Query: 333 VLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGK 392
T G +N+A + LL +L+ D AH W L + + GD+ ++ +
Sbjct: 271 AEPVVSPVTQNGQQQPFKQDLNIALKYLLQSLEIDQSDAHSWYYLGRVHMMRGDYNAAYE 330
Query: 393 CLEKA 397
++A
Sbjct: 331 AFQQA 335
>gi|384085566|ref|ZP_09996741.1| type IV pilus biogenesis/stability protein PilW [Acidithiobacillus
thiooxidans ATCC 19377]
Length = 289
Score = 45.8 bits (107), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 65/157 (41%), Gaps = 19/157 (12%)
Query: 247 QAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQ 306
+A ++ +LG L+ G + +I L D + D +G+AY Q G + + F+
Sbjct: 69 KAGIYTSLGTAYLQDGHPRQAIRELQMANQADDSYADAYNVMGLAYEQLGQKTLARQAFE 128
Query: 307 DLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKA 366
+ D +P NY A L+ NTG D A+ K+ L +
Sbjct: 129 QALSLDAKNPEYRNNYGAFLV------------NTG-----DYQQAIVQLKQATADPLYS 171
Query: 367 DPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 403
P+ A W NLA AY D ++ L +A L PN
Sbjct: 172 TPQFA--WTNLAQAYAGLKDPVAARNALNRALYLLPN 206
>gi|144898330|emb|CAM75194.1| methyltransferase [Magnetospirillum gryphiswaldense MSR-1]
Length = 543
Score = 45.8 bits (107), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 60/275 (21%), Positives = 101/275 (36%), Gaps = 38/275 (13%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 213
P AH+LLGL+ GQ +A L + + I Q L
Sbjct: 40 PSFGGAHYLLGLLALDQGQGKRAAG-------------------HLATAIAITPGQSALH 80
Query: 214 ESSGDNSLDKELE-PEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLS 272
+ G + LE E+ E + + A LG +L + GR+ +IS
Sbjct: 81 LAMG-----RALEMGNEVAEASLHFRTVLNIHPHHAEAHARLGHLLRQQGRVDEAISHCR 135
Query: 273 SLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL-----L 327
+ DP + + LG Q GD ++A+C + + P AL N+ L L
Sbjct: 136 HAVTADPGHAEAWNTLGALLQQQGDPREAAQCLRRALQLRPVWPTALNNFGLALKECGNL 195
Query: 328 CKYGSVLAG--------AGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLAN 379
+ ++L G AG T + L ++ A+E A+K P+ + W L
Sbjct: 196 AEAAAILEGAVDIRPDHAGTRTNLASVLRAMGQLDRAREQAEKAVKLAPRDSDSWVELGL 255
Query: 380 AYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVS 414
G + ++A + P+ + + +A S
Sbjct: 256 IRQAQGHEDGAASAFDRATAIAPDQIKPWFCLAES 290
>gi|297304121|ref|XP_002806323.1| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit [Macaca
mulatta]
Length = 963
Score = 45.8 bits (107), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 62/155 (40%), Gaps = 21/155 (13%)
Query: 251 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 310
++ LG + + G+LQ +I L + P+ D NL A +GDME + + +
Sbjct: 92 YSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAY----- 146
Query: 311 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 370
+ + Y L C + G L + AK C L A++ P
Sbjct: 147 ------VSALQYNPDLYC----------VRSDLGNLLKALGRLEEAKACYLKAIETQPNF 190
Query: 371 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 405
A W+NL + G+ + EKA L+PN +
Sbjct: 191 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL 225
Score = 40.0 bits (92), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 129/330 (39%), Gaps = 67/330 (20%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
LEE + +++++ AV W+ LG + G + +I + +DPN D
Sbjct: 172 RLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLD----- 226
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL- 347
AY G++ + A+ F + AA + AL L +V+ G AC+
Sbjct: 227 --AYINLGNVLKEARIFDRAV-------AAYLR--ALSLSPNHAVV------HGNLACVY 269
Query: 348 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 407
+ +++A + A++ P + NLANA G + C A +L P
Sbjct: 270 YEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPT---- 325
Query: 408 RYAVAVSRIKDAERSQ--------------EPTEQLSWAGNEMASILREGDPVQIEPPIA 453
+A +++ + + +R Q E + + A + +AS+L++ +Q A
Sbjct: 326 -HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQ----EA 380
Query: 454 WAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKAD 513
+ + A A+ N L +M++ G A +C A++ +
Sbjct: 381 LMHYKEAIRISPTFADAYSNMGNTLKEMQDVQG---------------ALQCYTRAIQIN 425
Query: 514 PKAAHIWANLANAYYLTGDHRSSGKCLEKV 543
P A +NLA+ H+ SG E +
Sbjct: 426 PAFADAHSNLASI------HKDSGNIPEAI 449
>gi|418750433|ref|ZP_13306719.1| tetratricopeptide repeat protein [Leptospira licerasiae str.
MMD4847]
gi|418758395|ref|ZP_13314577.1| tetratricopeptide repeat protein [Leptospira licerasiae serovar
Varillal str. VAR 010]
gi|384114297|gb|EIE00560.1| tetratricopeptide repeat protein [Leptospira licerasiae serovar
Varillal str. VAR 010]
gi|404273036|gb|EJZ40356.1| tetratricopeptide repeat protein [Leptospira licerasiae str.
MMD4847]
Length = 638
Score = 45.8 bits (107), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 78/186 (41%), Gaps = 22/186 (11%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTL--GLILLKSGRLQSSISVLSSLLAVDPNNCDCIG 286
+LEE + L+ + Q+ + ++ ++ G L G + SI+ L L +PNN D +
Sbjct: 275 KLEESVKYLELANQAGSNDPELFRSIAEGFEQLNQG--EQSINALQKGLKYNPNNLDLLF 332
Query: 287 NLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGAC 346
L Y+ GD+ + + ++ ++ + P ALL G
Sbjct: 333 QLAETYYNKGDLLAAEETYRRIV---DSTPGDSFTETALLNL---------------GVV 374
Query: 347 LDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMS 406
LDQ A L L +PK A + NL Y TG+ + + KA+ L+P+ +
Sbjct: 375 LDQMERYGEAITYLNRVLDLNPKNAKAYYNLGLVYKHTGNGTQAIENFRKASYLDPDDIK 434
Query: 407 TRYAVA 412
+ A+
Sbjct: 435 PKEALG 440
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 61/138 (44%), Gaps = 22/138 (15%)
Query: 231 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 290
EE ++ +S D+ LG++L + R +I+ L+ +L ++P N NLG+
Sbjct: 348 EETYRRIVDSTPGDSFTETALLNLGVVLDQMERYGEAITYLNRVLDLNPKNAKAYYNLGL 407
Query: 291 AYFQSGDMEQSAKCFQ-----------------DLILKDQNHPAALINYAALLLCK--YG 331
Y +G+ Q+ + F+ D L+++ + A+ Y+AL K Y
Sbjct: 408 VYKHTGNGTQAIENFRKASYLDPDDIKPKEALGDYYLENKFYREAIEEYSALFKQKEDYY 467
Query: 332 SV---LAGAGANTGEGAC 346
V LA A TGE +
Sbjct: 468 KVALKLAEAYMGTGESSS 485
>gi|310794486|gb|EFQ29947.1| tetratricopeptide [Glomerella graminicola M1.001]
Length = 885
Score = 45.8 bits (107), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 24/105 (22%), Positives = 50/105 (47%), Gaps = 1/105 (0%)
Query: 230 LEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLG 289
LEE + ++Q++ + N + LIL ++ L ++L +D N + G+LG
Sbjct: 61 LEEAMKAYDRALQANPQSVAAMNAISLILRTREEFHKAVDYLQAILKIDNTNGEAWGSLG 120
Query: 290 IAYFQSGDMEQSAKCFQDLILKDQNHPAALINYA-ALLLCKYGSV 333
Y D++Q+ +Q ++ ++ + Y +L +YGS+
Sbjct: 121 HCYLMMDDLQQAYAAYQSALVNLRSPREPKLWYGIGILYDRYGSL 165
>gi|335429748|ref|ZP_08556646.1| TPR repeat-containing protein [Haloplasma contractile SSD-17B]
gi|334889758|gb|EGM28043.1| TPR repeat-containing protein [Haloplasma contractile SSD-17B]
Length = 301
Score = 45.8 bits (107), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 72/164 (43%), Gaps = 24/164 (14%)
Query: 159 AHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESSGD 218
AHF L +Y +G+ KA + YEK ++ C++ ++L QI+ E +G+
Sbjct: 109 AHFFLANVYDEIGETSKAKAHYEKTIDL---CKSYFWA--YMNLGQIY-------ERNGE 156
Query: 219 NSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVD 278
N E+ L +++ D +++ LG++ K+G + SIS L++
Sbjct: 157 N-----------EKALLLFEKAESIDPTNHLIYFNLGVVYKKTGDFKKSISFYKKSLSLS 205
Query: 279 PNNCDCIGNLGIAYF-QSGDMEQSAKCFQDLILKDQNHPAALIN 321
NL + Y Q D+ QS + IL+ NH L N
Sbjct: 206 KEYPYTYLNLALLYKDQYNDLNQSLDIYNKGILQHPNHEVLLYN 249
>gi|291613082|ref|YP_003523239.1| hypothetical protein Slit_0612 [Sideroxydans lithotrophicus ES-1]
gi|291583194|gb|ADE10852.1| TPR repeat-containing protein [Sideroxydans lithotrophicus ES-1]
Length = 834
Score = 45.8 bits (107), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 89/201 (44%), Gaps = 39/201 (19%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 213
P A AH+ LG + G+ +AV+SY KA +I A L+
Sbjct: 281 PGLAEAHYNLGNTLKSQGKLEEAVASYRKALQI---------------------APGLVG 319
Query: 214 ESSGDNSLDKELEPE-ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLS 272
SS +L L+ + +L E + L+ +QS+ ++ LG L GRL+ + S
Sbjct: 320 ASS---NLGAALQAQGKLAEAETILRNVLQSNPDSLEAYSNLGSTLHDMGRLEEARSEYE 376
Query: 273 SLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLI------LKDQNHPAALINYAALL 326
L + P++ + + NLG G E++ +CF+D + LK +++ +NY++
Sbjct: 377 KALRIKPDHAEILSNLGNTLMTMGLQEEAVRCFRDALEYKPDFLKARSNLLFSLNYSSSS 436
Query: 327 L--------CKYGSVLAGAGA 339
C+YG +++ A
Sbjct: 437 SPEDCLAEACRYGEIVSSKAA 457
>gi|220930570|ref|YP_002507479.1| hypothetical protein Ccel_3209 [Clostridium cellulolyticum H10]
gi|220000898|gb|ACL77499.1| Tetratricopeptide TPR_2 repeat protein [Clostridium cellulolyticum
H10]
Length = 234
Score = 45.8 bits (107), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 43/196 (21%), Positives = 89/196 (45%), Gaps = 27/196 (13%)
Query: 231 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISV----LSSLLAVDPNNCDCI- 285
+E ++ L+++ ++++ +AVV T G +LLK G L S+ + L+S + N+ +
Sbjct: 25 QEAINLLEKAYKTESAKAVVVTTYGYLLLKEGHLDESLKIFKEQLNSTSKISDNDLYSLK 84
Query: 286 GNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGA 345
N +A +++G+++++ ++++ N+ + + YGS+ G
Sbjct: 85 ANYALALWKNGELDRAIAIYEEIF---PNYKSTNV---------YGSL----------GY 122
Query: 346 CLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 405
V A E L A++ + A I NL YY+ G++ + + +K L P
Sbjct: 123 LYILKGNVEKALEFNLEAMEYNNTGAVILDNLGQTYYMMGEYTKAEEIFKKLMALGPKFP 182
Query: 406 STRYAVAVSRIKDAER 421
Y A+ K E+
Sbjct: 183 EAYYDYALVLEKLGEK 198
>gi|359464250|ref|ZP_09252813.1| TPR domain-containing protein [Acaryochloris sp. CCMEE 5410]
Length = 1345
Score = 45.8 bits (107), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 71/175 (40%), Gaps = 21/175 (12%)
Query: 228 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 287
+ EE L+ L ++++ D A+ + G+ R + +I+ L +A+D G
Sbjct: 700 DRYEETLTALNQAIEIDPNMAIAYTNRGVTYSFLKRPKEAIADLKKAIALDSQYISAYGG 759
Query: 288 LGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL 347
LG+ Y G +++ F I D +P INY +G+G
Sbjct: 760 LGMLYHSQGRYQEALAQFNQGIAIDPKNP---INY------------------SGQGFVY 798
Query: 348 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 402
A A++ +P +A+ + + AN Y T ++ + L KA +L P
Sbjct: 799 FAQKQYQAAIAAHTQAIELEPDSANDYFSRANVYITTQQYQPAIADLTKAIQLAP 853
>gi|242050188|ref|XP_002462838.1| hypothetical protein SORBIDRAFT_02g032820 [Sorghum bicolor]
gi|241926215|gb|EER99359.1| hypothetical protein SORBIDRAFT_02g032820 [Sorghum bicolor]
Length = 211
Score = 45.8 bits (107), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 62/134 (46%)
Query: 185 EILLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSD 244
++L+R E D++ EL V+ A G L ++ P ++ + + + + +
Sbjct: 54 QVLVRRELDLSAKELQEQVRSGDASATEYFELGAVMLRRKFYPAAIKYLQQAIDKWDRDE 113
Query: 245 TRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKC 304
A V+N LG+ + +L +I + + P NLG AY Q D++ + K
Sbjct: 114 QDLAQVYNALGVSYKRDNKLDKAIQQFQKAVELQPGYVTAWNNLGDAYEQKKDLKLALKA 173
Query: 305 FQDLILKDQNHPAA 318
F++++L D N+ A
Sbjct: 174 FEEVLLFDPNNKVA 187
>gi|254784359|ref|YP_003071787.1| hypothetical protein TERTU_0096 [Teredinibacter turnerae T7901]
gi|237683944|gb|ACR11208.1| tetratricopeptide repeat domain protein [Teredinibacter turnerae
T7901]
Length = 733
Score = 45.8 bits (107), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 48/79 (60%)
Query: 228 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 287
+++++ + L+ S+++ + ++ LG + L +G +Q +I ++L + P N + N
Sbjct: 478 KQVDDAIKLLQSSIEAAPKDWRNYSHLGRLYLSTGEMQLAIEAYLAVLEITPKNSSVLSN 537
Query: 288 LGIAYFQSGDMEQSAKCFQ 306
LG AY+ +G+++++ + FQ
Sbjct: 538 LGTAYYFTGNLKKAREYFQ 556
>gi|406982865|gb|EKE04132.1| hypothetical protein ACD_20C00104G0026 [uncultured bacterium]
Length = 356
Score = 45.8 bits (107), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 45/215 (20%), Positives = 87/215 (40%), Gaps = 15/215 (6%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
EL +++ ++ +Q + LG L SG+L+ S+ LL++D N + N+
Sbjct: 7 ELNKVIEGARKKIQETPDNVEAYFVLGTTLALSGKLEESLKTYRELLSIDSVNVQALVNI 66
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL--LCKYGSVLAG---------- 336
G F G ++++ ++ I + +A +N A + KY + G
Sbjct: 67 GSTLFLMGKVDEAIDNYKKAIELNPESVSAYMNLANTYAEIGKYDEAIEGYKKSIEISPD 126
Query: 337 -AGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLE 395
A + G + A E +ALK DP+ + N+A+ Y + + +
Sbjct: 127 NIDAYSSLGLAFQDLRKYDEAMENYRSALKLDPENYEHYVNVASVYMQKTQFEDAIEFYK 186
Query: 396 KAAKLEPNCMSTRYAV--AVSRIKDAERSQEPTEQ 428
KA N + + A+S +K +S E ++
Sbjct: 187 KAVNFNNNDYKSLICIANALSELKKYNKSFEYYQK 221
>gi|186685148|ref|YP_001868344.1| hypothetical protein Npun_F5064 [Nostoc punctiforme PCC 73102]
gi|186467600|gb|ACC83401.1| Tetratricopeptide TPR_2 repeat protein [Nostoc punctiforme PCC
73102]
Length = 307
Score = 45.8 bits (107), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 74/182 (40%), Gaps = 21/182 (11%)
Query: 239 ESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDM 298
E +S+ + A+ W GL +++G+++ +I+ +DP NLG+AY Q+G +
Sbjct: 37 ELAKSNGKTAIDWLNQGLQAIQAGKVKDAIAAFKQAAKLDPTLAPAYYNLGLAYRQTGQL 96
Query: 299 EQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKE 358
+ SA F D A A AN G GA L+ + + +A +
Sbjct: 97 QPSADAFYRATQAD-------------------PKFAPAFANLG-GALLE-GNNLQLAND 135
Query: 359 CLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKD 418
L AL+ DPK N GD + ++A + N Y + + ++
Sbjct: 136 YLQRALELDPKLGFAHYNFGLVREQQGDCEKAIASFKQAIEYSKNAPEPPYHIGMCYLQQ 195
Query: 419 AE 420
+
Sbjct: 196 GK 197
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 38/185 (20%), Positives = 70/185 (37%), Gaps = 21/185 (11%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
+L+ + Q+D + A + LG LL+ LQ + L L +DP N
Sbjct: 95 QLQPSADAFYRATQADPKFAPAFANLGGALLEGNNLQLANDYLQRALELDPKLGFAHYNF 154
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLD 348
G+ Q GD E++ F+ I +N P + G C
Sbjct: 155 GLVREQQGDCEKAIASFKQAIEYSKNAPEPPYHI---------------------GMCYL 193
Query: 349 QASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTR 408
Q ++ A++ A+K +PK + NL + ++ + + + K+A+ N +
Sbjct: 194 QQGKLDRARDAFNQAVKINPKYPEAYYNLGSIWFQQNKLQEALEAFRKSAEANSNYPNAY 253
Query: 409 YAVAV 413
Y +
Sbjct: 254 YGAGL 258
>gi|449513887|ref|XP_004176382.1| PREDICTED: LOW QUALITY PROTEIN: tetratricopeptide repeat protein 37
[Taeniopygia guttata]
Length = 1566
Score = 45.8 bits (107), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 2/95 (2%)
Query: 214 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTL--GLILLKSGRLQSSISVL 271
E SG ++ +E +++ LS L E + W L GL L++GR ++S L
Sbjct: 526 EESGTAAVSLSVELGDMDTALSILNEVTEKARPGTAKWAWLHRGLYYLRTGRPSQAVSDL 585
Query: 272 SSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQ 306
+ L DP + +C +LG AYF G + K F+
Sbjct: 586 QAALRADPKDSNCWESLGEAYFNRGSYSTALKSFR 620
Score = 41.6 bits (96), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 71/139 (51%), Gaps = 21/139 (15%)
Query: 170 LGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEE 229
LG+PLK +S + + C+ L ++ IH A+ ++G ++ K E
Sbjct: 768 LGRPLKLISF------LSIGCD--------LEIIYIHQAEHF---TAGGHTRLKI--SEL 808
Query: 230 LEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIG--N 287
LE+ L LK++++ D++ + WN LG++ S +++ S + +V + + N
Sbjct: 809 LEKSLQCLKKAVRLDSKNHLYWNALGVVASCSAIGNYALAQHSFIKSVQAEQINVVAWTN 868
Query: 288 LGIAYFQSGDMEQSAKCFQ 306
LG+ Y +G++EQ+ + F+
Sbjct: 869 LGVLYLATGNIEQAHEAFK 887
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 31/53 (58%)
Query: 360 LLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVA 412
L AAL+ADPK ++ W +L AY+ G + ++ K KA++L P + Y A
Sbjct: 585 LQAALRADPKDSNCWESLGEAYFNRGSYSTALKSFRKASELNPGLTYSIYRAA 637
>gi|209522608|ref|ZP_03271173.1| TPR repeat-containing protein [Burkholderia sp. H160]
gi|209496956|gb|EDZ97246.1| TPR repeat-containing protein [Burkholderia sp. H160]
Length = 287
Score = 45.8 bits (107), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 72/181 (39%), Gaps = 21/181 (11%)
Query: 248 AVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQ- 306
A + LG L G++ ++I + L + P NLG AY G E +A F+
Sbjct: 82 AALQLNLGNALKALGQIDAAIEQFRNALTLAPTFPMAHYNLGNAYASLGRHEDAADAFER 141
Query: 307 DLILKDQN----------------HPAALINYAALLLCKYGSVLAGAGANTGEGACLDQA 350
L L+ + H AA+ ++ L + G AGA G L+
Sbjct: 142 SLRLQPDDASSHNNLGNALHALGRHAAAIASFRRALELRPGH----AGALNNMGMSLNAL 197
Query: 351 SAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYA 410
+ A C AAL +P+ NLAN + TG H + E A +L+PN Y
Sbjct: 198 DRPDEAVPCFEAALATEPRFVAAHFNLANTFDATGRHAQAVASFEAALRLQPNLPPAIYG 257
Query: 411 V 411
+
Sbjct: 258 M 258
>gi|170065407|ref|XP_001867926.1| smile protein [Culex quinquefasciatus]
gi|167882504|gb|EDS45887.1| smile protein [Culex quinquefasciatus]
Length = 715
Score = 45.8 bits (107), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 73/170 (42%), Gaps = 12/170 (7%)
Query: 159 AHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARP--ELLSLVQIHHAQCLLPESS 216
AH +G Y L +A +Y KA+ +L + A+P + + +H L +
Sbjct: 224 AHINVGRTYNHLKMFKEAEQAYLKAKSLLPK-----AKPGESYQARIAPNHLNVFLNLA- 277
Query: 217 GDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLA 276
N + K E ++L + SM+SD QA + G IL+K R + + V L
Sbjct: 278 --NLISKNATRLEEADLLYRQAISMRSDYTQAYI--NRGDILIKLNRTKEAQEVYERALL 333
Query: 277 VDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL 326
D N D NLG+ + + G Q+ + D H AL+N A LL
Sbjct: 334 YDSTNPDIYYNLGVVFLEQGKASQALAYLDKALEFDPEHEQALLNSAILL 383
>gi|427737813|ref|YP_007057357.1| glycosyl transferase family protein [Rivularia sp. PCC 7116]
gi|427372854|gb|AFY56810.1| glycosyl transferase [Rivularia sp. PCC 7116]
Length = 399
Score = 45.8 bits (107), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 76/179 (42%), Gaps = 22/179 (12%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIG-- 286
+LE ++E ++ A + + LG + + G++ SI +LS ++V+ N D +
Sbjct: 182 KLERAKVGMEEFFANNPDDAYICSKLGALYIDLGKITESIQLLSKGVSVESENSDILYEL 241
Query: 287 --NLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEG 344
+LGIAY + + +Q+ +Q AA L Y + GA N G
Sbjct: 242 YYHLGIAYSRLKNYQQAIAHYQ----------------AATKLPIYPILKLGAYNNLG-- 283
Query: 345 ACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 403
+ L + +N AK+ LK DP + NL Y G + + KA L PN
Sbjct: 284 SLLKEKGDLNGAKKAYETTLKIDPSFISGYYNLGMTYKAMGLFKDAIAAYVKAIDLNPN 342
Score = 39.3 bits (90), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 67/162 (41%), Gaps = 23/162 (14%)
Query: 160 HFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESSGDN 219
++ LG+ Y RL +A++ Y+ A ++ + +L L ++ LL E N
Sbjct: 242 YYHLGIAYSRLKNYQQAIAHYQAATKLPIY--------PILKLGAYNNLGSLLKEKGDLN 293
Query: 220 SLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDP 279
K E +++ D + LG+ G + +I+ + ++P
Sbjct: 294 GAKKAYET------------TLKIDPSFISGYYNLGMTYKAMGLFKDAIAAYVKAIDLNP 341
Query: 280 NNCDCIGNLGIAYFQSGDMEQSAKCFQ---DLILKDQNHPAA 318
N NLG+ ++G ++ S F+ DL +K NH AA
Sbjct: 342 NYAQAYQNLGVVLLKAGYVDDSLTAFKEAIDLHVKQNNHFAA 383
>gi|254417461|ref|ZP_05031201.1| tetratricopeptide repeat domain protein [Coleofasciculus
chthonoplastes PCC 7420]
gi|196175726|gb|EDX70750.1| tetratricopeptide repeat domain protein [Coleofasciculus
chthonoplastes PCC 7420]
Length = 374
Score = 45.8 bits (107), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 68/185 (36%), Gaps = 21/185 (11%)
Query: 225 LEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDC 284
L+ + + ++ +++++ W LGL L R + +I+ ++P +
Sbjct: 18 LQGGDFDAAVALFQDAVKLTPENGEAWTGLGLALGHLQRYEEAIASFDQAGVLNPQDASI 77
Query: 285 IGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEG 344
N GI G E + F +I ++ HP A G+ L G N
Sbjct: 78 WLNRGIVLSDWGKHEAAIASFDQVIEREPTHPEA--------WNSRGTSLMILGRNKEAL 129
Query: 345 ACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNC 404
A DQA A N P W+N N G H+++ K +KA + PN
Sbjct: 130 ASFDQAIACN-------------PNYDKAWSNRGNVLTNLGRHKAALKSFDKALHISPNH 176
Query: 405 MSTRY 409
Y
Sbjct: 177 PEIWY 181
Score = 43.1 bits (100), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 57/138 (41%), Gaps = 10/138 (7%)
Query: 231 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 290
+E L +++++ D + WN GL + + GRLQ +++ L P N + N G
Sbjct: 228 KEALLYYEKALEFDPNETHCWNNRGLTMRRLGRLQDAVASYDRALECMPENYEAWDNRGY 287
Query: 291 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQA 350
A + G ++ F + + +H A+ N G A G T ++QA
Sbjct: 288 ALVKMGRYREAMASFDKALEVNPDHVNAVYN--------KGYCYAAQGKVTLAVNYIEQA 339
Query: 351 SAVNVAKECLLAALKADP 368
VN K L K DP
Sbjct: 340 IKVNPQK--YLPVAKTDP 355
>gi|157112300|ref|XP_001657484.1| smile protein [Aedes aegypti]
gi|108883757|gb|EAT47982.1| AAEL000971-PA [Aedes aegypti]
Length = 707
Score = 45.8 bits (107), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 73/170 (42%), Gaps = 12/170 (7%)
Query: 159 AHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARP--ELLSLVQIHHAQCLLPESS 216
AH +G Y L +A +Y KA+ +L + A+P + + +H L +
Sbjct: 155 AHINVGRTYNHLKMFKEAEQAYLKAKSLLPK-----AKPGESYQARIAPNHLNVFLNLA- 208
Query: 217 GDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLA 276
N + K E ++L + SM+SD QA + G IL+K R + + V L
Sbjct: 209 --NLISKNATRLEEADLLYRQAISMRSDYTQAYI--NRGDILIKLNRTKEAQEVYERALL 264
Query: 277 VDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL 326
D N D NLG+ + + G Q+ + D H AL+N A LL
Sbjct: 265 YDSTNPDIYYNLGVVFLEQGKASQALAYLDKALEFDPEHEQALLNSAILL 314
>gi|218248025|ref|YP_002373396.1| family 2 glycosyl transferase [Cyanothece sp. PCC 8801]
gi|218168503|gb|ACK67240.1| glycosyl transferase family 2 [Cyanothece sp. PCC 8801]
Length = 1252
Score = 45.8 bits (107), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 70/176 (39%), Gaps = 4/176 (2%)
Query: 241 MQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQ 300
++ + A W +LG + + + +I+ L ++PN NLG Q E+
Sbjct: 686 LKVQPKSAKAWMSLGNLYQEKKQFSQAINAYQQALFLEPNLVAVYNNLGYVLQQQSQWEE 745
Query: 301 SAKCFQDLILKDQNHPAALINYAALLLCKYG----SVLAGAGANTGEGACLDQASAVNVA 356
+ C+Q + N A IN A +L + + A N G +Q + A
Sbjct: 746 AISCYQKALEIQPNCVEAEINLANVLHSQNKLPPEQQIQYAQLNLQLGIKQEQQGNLATA 805
Query: 357 KECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVA 412
EC +K P++A I+ NL A+ G + + A L P T +++
Sbjct: 806 IECYQQGIKLQPESAEIYHNLGVAWQKQGKLEEAIAAYQNALDLNPQQGKTYFSLG 861
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 44/80 (55%)
Query: 247 QAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQ 306
QA++ N LG++L + + + SI+ L++ PN D +LGIA+ + ++E++ + +Q
Sbjct: 56 QAMILNNLGIVLQEKQQFEESINCYYQALSIKPNWADVHNDLGIAFEKLDNLEEAFQHYQ 115
Query: 307 DLILKDQNHPAALINYAALL 326
+ + N A N +L
Sbjct: 116 KALTLNPNLAQASFNIGNIL 135
>gi|149048929|gb|EDM01383.1| rCG29705 [Rattus norvegicus]
Length = 519
Score = 45.8 bits (107), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 75/338 (22%), Positives = 139/338 (41%), Gaps = 54/338 (15%)
Query: 228 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 287
E+ EE + LKES++ A +++L +L + R + + V + + P++ D N
Sbjct: 199 EKTEEAIVLLKESIKYGPDFADAYSSLASLLAEQERFKEAEDVYQAGIKNCPDSSDLHNN 258
Query: 288 LGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL 347
+ SG E++ +Q I +H A++N G + G N+
Sbjct: 259 YAVFLVDSGFPEKAVAHYQQAIQLSPSHHVAVVNL--------GRLHRSLGENS------ 304
Query: 348 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 407
+A+E AL+ + A + + L YY TG H+ + + +A L+P+
Sbjct: 305 -------MAEEWYRRALQV-ARTAEVLSPLGALYYNTGRHKEALEVYREAVSLQPSQRDL 356
Query: 408 RYAVA-----VSRIKDAERSQEPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFAAV-- 460
R A+A + + K+AE+ + S + +P +E + +A+
Sbjct: 357 RLALAQVLAVMGQTKEAEK--------------ITSHIVSEEPRCLE---CYRLLSAIYS 399
Query: 461 QKTHHEVAAAFETEENELS-KMEECAGAGESAF-----LDQASAVNVAKECLLAALKADP 514
++ HHE A E E L K ++ E F L + + ++ A E AA+ DP
Sbjct: 400 KQEHHE--KALEAIEKALQLKPKDPKVISELFFTKGNQLREQNLLDKAFESYEAAVTLDP 457
Query: 515 KAAHIWANLANAYYLTGDHRSSGKCLEKVLMVYCSSNL 552
A W N+ ++ G + + E+ L + S L
Sbjct: 458 DQAQAWMNMGGIRHIQGSYVPARVYYERALRLVPESKL 495
>gi|376002124|ref|ZP_09779971.1| conserved hypothetical protein [Arthrospira sp. PCC 8005]
gi|375329510|emb|CCE15724.1| conserved hypothetical protein [Arthrospira sp. PCC 8005]
Length = 728
Score = 45.8 bits (107), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 41/193 (21%), Positives = 82/193 (42%), Gaps = 15/193 (7%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
E ++ ++ + +++ V+ T+G + G+++ +I + L DPN NL
Sbjct: 32 EYDQAIAACQRALELKPNWPPVYVTMGNVSQGRGQIEEAIRCYAKALEFDPNLPQAHANL 91
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYA-----------ALLL----CKYGSV 333
G +++ G +E + +Q I + A +N A AL++ + S+
Sbjct: 92 GSMFYKQGKLESAIDSYQKAIALKPDLTAVYVNLARALRQMGRESEALIVEQKANQIHSL 151
Query: 334 LAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKC 393
G+ +G L + A A+ ADP A + L + G H+ +
Sbjct: 152 TGGSVHLYNQGNQLFNQGKLEEAIALWKQAIVADPNLAEAYCQLGIVHRHQGQHKEAIPF 211
Query: 394 LEKAAKLEPNCMS 406
L+KA +L+PN ++
Sbjct: 212 LQKAIELKPNFVA 224
>gi|343083369|ref|YP_004772664.1| hypothetical protein [Cyclobacterium marinum DSM 745]
gi|342351903|gb|AEL24433.1| Tetratricopeptide TPR_1 repeat-containing protein [Cyclobacterium
marinum DSM 745]
Length = 237
Score = 45.8 bits (107), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 83/206 (40%), Gaps = 23/206 (11%)
Query: 225 LEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDC 284
L+ ++ E + L +++DT A WN G+I ++G+ +I S + +D +N
Sbjct: 33 LDKQDFETAIGHLNRLVENDTSHAPAWNARGVIFFQTGKWDDAIDSFSRSIDLDESNYKP 92
Query: 285 IGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAAL-INYAALLLCKYGSVLAGAGANTGE 343
N G Y + + + + L D N L IN + Y LA G E
Sbjct: 93 FFNRGNVYMEKEEYKMA--------LVDYNRANGLDINQVDIY---YNRGLALLGLEMYE 141
Query: 344 GACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 403
A +D AL A+P+ + N A A+ D ++ LE+ +++
Sbjct: 142 DALID-----------FDKALHANPEQPQVLFNKAKAHLGNNDPLTAIATLEELTRIDKR 190
Query: 404 CMSTRYAVAVSRIKDAERSQEPTEQL 429
+ Y + V+ + + ++ E L
Sbjct: 191 NGAAFYLLGVTEMSALGKKEKGCEYL 216
>gi|196010431|ref|XP_002115080.1| hypothetical protein TRIADDRAFT_58866 [Trichoplax adhaerens]
gi|190582463|gb|EDV22536.1| hypothetical protein TRIADDRAFT_58866 [Trichoplax adhaerens]
Length = 1307
Score = 45.8 bits (107), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 81/184 (44%), Gaps = 36/184 (19%)
Query: 163 LGLMYQRLGQPLKAVSSYEKAEEILLRC----EADIARPELLSLVQIHHAQCLLPESSGD 218
+GLMY+ Q +KA+S ++K+ EI L +++A S QI GD
Sbjct: 1027 MGLMYRHRRQYVKAISMFQKSLEIQLLVYGCNHSNVAN----SYRQI-----------GD 1071
Query: 219 --NSLDKELEPEELEEILSKLKESMQSDTR--QAVVWNTLGLILLKSGRLQSSISVLSSL 274
N+ K E + E K++ S+ D A+++ ++G + GR + +IS+
Sbjct: 1072 IYNNQKKYKEAISMYEKSLKIQLSVNDDNYPDVAILYFSIGNVYCNQGRYEEAISMYDKS 1131
Query: 275 LAV--------DPNNCDCIGNLGIAYFQSGDMEQSAKCFQD-----LILKDQNHPAALIN 321
L + P+ D N+G Y G E++ +Q L++ D +HP +
Sbjct: 1132 LKIMLLVFGENHPDITDLYDNMGSTYRYQGKYEEALSVYQKSLKIRLLVHDHHHPKVASS 1191
Query: 322 YAAL 325
YA +
Sbjct: 1192 YALI 1195
>gi|168044085|ref|XP_001774513.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674225|gb|EDQ60737.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 932
Score = 45.8 bits (107), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 86/198 (43%), Gaps = 24/198 (12%)
Query: 228 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 287
+ + L K +E+++ + + A + + L + G + +I S+ + + PN CD N
Sbjct: 56 HDFDMCLVKNEEAIRIEPKFAECYGNMANALKEKGDIDLAILYYSAAIELKPNFCDAWSN 115
Query: 288 LGIAYFQSGDMEQSAKCFQD-LILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGAC 346
L A+ + G ++++A+C Q LIL + L A +N G
Sbjct: 116 LASAFMRKGRLQEAAECCQHALILNPR--------------------LVDAHSNLGN--L 153
Query: 347 LDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMS 406
L + A C + A++ P A W+NLA G+ + + ++A +L+P+ +
Sbjct: 154 LKAQGLTHHAYLCYVEAIRLQPTFAIAWSNLAGLLMEAGELQKALTYYKEAIRLKPSFVD 213
Query: 407 TRYAVAVSRIKDAERSQE 424
+ + +K R QE
Sbjct: 214 AHLNLG-NVLKAMNRHQE 230
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 58/266 (21%), Positives = 107/266 (40%), Gaps = 36/266 (13%)
Query: 151 RKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQ------ 204
R P AH LG + + + + +A++ Y ++ I LR + IA L S+
Sbjct: 206 RLKPSFVDAHLNLGNVLKAMNRHQEAIACYNRS--IQLRPDYAIAYGNLASVYYEQGLLD 263
Query: 205 ---IHHAQCLLPESS---GDNSLDKEL-EPEELEEILSKLKESMQSDTRQAVVWNTLGLI 257
+H+ Q LL +SS N+L L + +++ +S ++ +Q LG I
Sbjct: 264 HAIVHYKQALLFDSSFIEAYNNLGNALKDAGQVDGAISCYEKCLQLQDSHPQALTNLGNI 323
Query: 258 LLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPA 317
++ + ++ + + L V NL Y Q G+ + C+ +++ D
Sbjct: 324 YMECNMVSTAATFYKATLNVTTGLSAPYSNLATIYKQQGNYADAIACYNEVMRVDPMAAD 383
Query: 318 ALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANL 377
L+N G L + V+ A + + A+ P A ANL
Sbjct: 384 GLVN---------------------RGNTLKEIGRVSEAIQDYIRAVAIRPTMAEAHANL 422
Query: 378 ANAYYLTGDHRSSGKCLEKAAKLEPN 403
A+AY +G ++ K ++A L P+
Sbjct: 423 ASAYKDSGHVEAAIKSYKQALFLRPD 448
>gi|170740913|ref|YP_001769568.1| hypothetical protein M446_2695 [Methylobacterium sp. 4-46]
gi|168195187|gb|ACA17134.1| TPR repeat-containing protein [Methylobacterium sp. 4-46]
Length = 292
Score = 45.8 bits (107), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 44/92 (47%)
Query: 234 LSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYF 293
++ L + +Q + +NT G ++G +I+ + + +DPN+ N +AY
Sbjct: 56 IASLTDVIQRNPSDPAAYNTRGAAYARAGNYGEAIADFTKAVQLDPNSASAYSNRALAYR 115
Query: 294 QSGDMEQSAKCFQDLILKDQNHPAALINYAAL 325
QSG + + + F + D N+ AA I A L
Sbjct: 116 QSGRNDAALQDFTRALTADPNYSAAYIGRANL 147
>gi|118581730|ref|YP_902980.1| hypothetical protein Ppro_3330 [Pelobacter propionicus DSM 2379]
gi|118504440|gb|ABL00923.1| TPR repeat-containing protein [Pelobacter propionicus DSM 2379]
Length = 1038
Score = 45.8 bits (107), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 38/183 (20%), Positives = 80/183 (43%), Gaps = 22/183 (12%)
Query: 236 KLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQS 295
+ ++++ D + LGL+L + R + + + ++ L++ PN+CD LG A+F
Sbjct: 576 RFRQAIGYDENNVDAYRCLGLLLNEQERYEEAAFLFATALSLAPNDCDLRRFLGDAHFGL 635
Query: 296 GDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNV 355
G+ +A + + + + + L+N GA + + +V
Sbjct: 636 GNYADAAHWYNNALSRRPDDVEVLLNL---------------------GAASEVLNRFDV 674
Query: 356 AKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVA-VS 414
A+ LL A++ P + NL + + + +KA + +PN + R+ +A VS
Sbjct: 675 AECSLLRAIELSPGDHRAYLNLGGVFLSQNRLEQAERYFQKALECKPNDPTVRWNLAQVS 734
Query: 415 RIK 417
I+
Sbjct: 735 LIR 737
>gi|196232461|ref|ZP_03131314.1| Tetratricopeptide TPR_2 repeat protein [Chthoniobacter flavus
Ellin428]
gi|196223533|gb|EDY18050.1| Tetratricopeptide TPR_2 repeat protein [Chthoniobacter flavus
Ellin428]
Length = 760
Score = 45.8 bits (107), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 112/293 (38%), Gaps = 47/293 (16%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 213
P+N A+ LGL+Y+ LG+ +A+ +Y +A L+ + + P +L + L
Sbjct: 71 PRNGAAYSNLGLVYRSLGRVDEAMEAYRRA----LQLQPALPEP-YHNLANLLRQTGRLN 125
Query: 214 ESSGDNSLDKELEPEELE----------------EILSKLKESMQSDTRQAVVWNTLGLI 257
E+ G L P +E E ++ +E+++ + A +N LG I
Sbjct: 126 EAVGWLQQAIRLRPHGVELHKNLGDVLSAAGRKDEAIAAYQEAIRLNPNFAEAYNNLGNI 185
Query: 258 LLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPA 317
L RL +I+V + P++ + NL A G + +Q + P
Sbjct: 186 LRGERRLSEAITVFGEAQRLLPDSAEIHNNLAAALADDGQFAHADAAYQRALKIKPAFPQ 245
Query: 318 ALINYAALLLCKYGSV----------------LAGAGANTGEGACLDQASAVNVAKECLL 361
AL L K G A A N G L + ++ A
Sbjct: 246 ALFGLGN-NLAKQGRRDEAAAAFRAALETQPDYAKAWNNLGN--LLREMGQMDEAIAAYR 302
Query: 362 AALKADPKAAHIWANLANAYYLTGD-------HRSSGKCLEKAAKLEPNCMST 407
+ P A +++NLANA TGD HR + + K A ++ N + T
Sbjct: 303 RTIALQPDYAEVYSNLANALKDTGDLDGAMETHRWARRLQPKNAGIQSNVIYT 355
Score = 42.4 bits (98), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 33/154 (21%), Positives = 60/154 (38%), Gaps = 21/154 (13%)
Query: 251 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 310
W+ LGL+ ++GR ++ + LA++P N NLG+ Y G ++++ + ++ +
Sbjct: 43 WHMLGLLAHQTGRSDLALEYIGRALAIEPRNGAAYSNLGLVYRSLGRVDEAMEAYRRALQ 102
Query: 311 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 370
P N A L L Q +N A L A++ P
Sbjct: 103 LQPALPEPYHNLANL---------------------LRQTGRLNEAVGWLQQAIRLRPHG 141
Query: 371 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNC 404
+ NL + G + ++A +L PN
Sbjct: 142 VELHKNLGDVLSAAGRKDEAIAAYQEAIRLNPNF 175
>gi|152982107|ref|YP_001352212.1| hypothetical protein mma_0522 [Janthinobacterium sp. Marseille]
gi|151282184|gb|ABR90594.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille]
Length = 699
Score = 45.8 bits (107), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 35/56 (62%)
Query: 251 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQ 306
WN LG+IL +SG+L++S+ L LA+ PN+ NLG + + +EQ+ + +Q
Sbjct: 121 WNNLGIILQESGKLEASLDSLERALALRPNDARAHNNLGNTWRRLYRLEQAEQHYQ 176
>gi|395839356|ref|XP_003792558.1| PREDICTED: transmembrane and TPR repeat-containing protein 1,
partial [Otolemur garnettii]
Length = 836
Score = 45.8 bits (107), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 89/199 (44%), Gaps = 27/199 (13%)
Query: 228 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 287
E+ EE +S LK+S++ A +++L +L + R + + + + + P++ D N
Sbjct: 516 EKKEEAISLLKDSIKYGPEFADAYSSLASLLAEQERFKEAEEIYQAGIKNCPDSSDLHNN 575
Query: 288 LGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL 347
G+ SG E++ +Q I +H A++N G + G N+
Sbjct: 576 YGVFLVDSGFPEKAVTHYQQAIKLSPSHHVAMVN--------LGRLYRSLGENS------ 621
Query: 348 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 407
+A+E AL+ + A I + L YY TG H + + +AA L+P+
Sbjct: 622 -------MAEEWYKRALQV-ARTAEILSPLGALYYNTGRHEEALQIYREAAALQPSQREL 673
Query: 408 RYAVA-----VSRIKDAER 421
R A+A + + K+AE+
Sbjct: 674 RLALAQVLAVMGQTKEAEK 692
>gi|325958505|ref|YP_004289971.1| hypothetical protein Metbo_0748 [Methanobacterium sp. AL-21]
gi|325329937|gb|ADZ08999.1| Tetratricopeptide TPR_1 repeat-containing protein [Methanobacterium
sp. AL-21]
Length = 158
Score = 45.8 bits (107), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 58/129 (44%), Gaps = 13/129 (10%)
Query: 287 NLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL--LCKYGSVL---------- 334
N GI ++++G ++ KC++ + D+N AL N +L L +Y L
Sbjct: 10 NEGIEFYENGQYPEALKCYEKALELDKNFVQALNNKGNVLRVLGRYDESLESFDTAILKE 69
Query: 335 -AGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKC 393
A +GA + N A EC ALK +PK + +N A +GD S +C
Sbjct: 70 PKNAELWVNKGAVYYEMDDYNQAIECYDEALKIEPKNTNALSNKGAALANSGDLDSGMEC 129
Query: 394 LEKAAKLEP 402
+A K++P
Sbjct: 130 FNEALKIDP 138
Score = 38.9 bits (89), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 59/144 (40%), Gaps = 23/144 (15%)
Query: 232 EILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIA 291
E L +++++ D N G +L GR S+ + + +P N + N G
Sbjct: 23 EALKCYEKALELDKNFVQALNNKGNVLRVLGRYDESLESFDTAILKEPKNAELWVNKGAV 82
Query: 292 YFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQAS 351
Y++ D Q+ +C+ + + + + AL N A L AN+G+
Sbjct: 83 YYEMDDYNQAIECYDEALKIEPKNTNALSNKGAAL------------ANSGD-------- 122
Query: 352 AVNVAKECLLAALKADP--KAAHI 373
++ EC ALK DP AHI
Sbjct: 123 -LDSGMECFNEALKIDPLDVNAHI 145
>gi|171689182|ref|XP_001909531.1| hypothetical protein [Podospora anserina S mat+]
gi|170944553|emb|CAP70664.1| unnamed protein product [Podospora anserina S mat+]
Length = 846
Score = 45.8 bits (107), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 52/105 (49%), Gaps = 1/105 (0%)
Query: 230 LEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLG 289
LEE ++ + ++ ++ N L ++L + L +++ +D NN + G+LG
Sbjct: 17 LEEAMTCYERALTANPNSINALNALSVVLRTQENFPKAAEYLHAIIKLDGNNGEAWGSLG 76
Query: 290 IAYFQSGDMEQSAKCFQDLILKDQNHPAALINYA-ALLLCKYGSV 333
Y D++Q+ + +Q+ +LK N + Y +L +YGS+
Sbjct: 77 HCYLMMDDLQQAYQAYQNALLKLPNPKEPRLWYGIGILYDRYGSL 121
>gi|291001045|ref|XP_002683089.1| predicted protein [Naegleria gruberi]
gi|284096718|gb|EFC50345.1| predicted protein [Naegleria gruberi]
Length = 455
Score = 45.4 bits (106), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 31/157 (19%), Positives = 61/157 (38%), Gaps = 21/157 (13%)
Query: 246 RQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCF 305
R + + LG I R + +I + L P N + + +G+ Y + GD ++
Sbjct: 190 RHDITFIELGKIFTIQERYEEAIDIYLEALDFSPENPELLSTVGLLYLRVGDNLKAFDYL 249
Query: 306 QDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALK 365
+ + D +P ++ G+ + + VA A K
Sbjct: 250 GNSLSHDPTNPKTIL---------------------ATGSIIQDHGEMEVALSKYRIAAK 288
Query: 366 ADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 402
+P +A +W N+ ++ D+ +S CL++A L P
Sbjct: 289 KNPNSAQLWNNIGMCFFGKQDYVTSIACLKRALYLAP 325
>gi|187925716|ref|YP_001897358.1| hypothetical protein Bphyt_3746 [Burkholderia phytofirmans PsJN]
gi|187716910|gb|ACD18134.1| TPR repeat-containing protein [Burkholderia phytofirmans PsJN]
Length = 602
Score = 45.4 bits (106), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 66/169 (39%), Gaps = 21/169 (12%)
Query: 235 SKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQ 294
S + +++ D A W+ GL+ G L ++ L + P+ D N G+A
Sbjct: 75 SLMSRALKLDRHDAACWSNRGLVAAALGHLDEAMICYDQALQLQPDFADAHNNFGVALQA 134
Query: 295 SGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVN 354
GD+ ++ + ++ AL + LL A G L + +
Sbjct: 135 QGDLSEAIEQYR----------LALASNPMLL-----------DARLNLGTALSKLGHFD 173
Query: 355 VAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 403
A C AL DP +A N+ NA+ GDH ++ E+A L N
Sbjct: 174 DALACYREALSLDPTSAEAHFNVGNAHKARGDHGAAIASFERALSLRAN 222
>gi|196232458|ref|ZP_03131311.1| TPR repeat-containing protein [Chthoniobacter flavus Ellin428]
gi|196223530|gb|EDY18047.1| TPR repeat-containing protein [Chthoniobacter flavus Ellin428]
Length = 747
Score = 45.4 bits (106), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 69/163 (42%), Gaps = 13/163 (7%)
Query: 254 LGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQ------- 306
LG+ +++GR + ++++L+ + A+ PN+ NLG AY G E++ F+
Sbjct: 44 LGVAAMQTGRAELAVNLLNRVAALVPNHPAVHSNLGEAYRGLGKFEEAVASFRRALQLKP 103
Query: 307 DLILKDQNHPAALINYAAL--LLCKYGSVLA----GAGANTGEGACLDQASAVNVAKECL 360
D +L N L+ + L + Y VL A+ G L + + A E L
Sbjct: 104 DDVLAQYNLGNVLVEWGKLEEAIAAYRRVLTLKPDYVDAHNNLGIALARQGVMTEATEVL 163
Query: 361 LAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 403
AL+ P A W N G + + +A +L PN
Sbjct: 164 RRALQLAPADAGAWNNFGIVLAEQGRFGEAVEAYRRALELAPN 206
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 69/175 (39%), Gaps = 21/175 (12%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
+ EE ++ + ++Q + LG +L++ G+L+ +I+ +L + P+ D NL
Sbjct: 87 KFEEAVASFRRALQLKPDDVLAQYNLGNVLVEWGKLEEAIAAYRRVLTLKPDYVDAHNNL 146
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLD 348
GIA + G M ++ + + AL L A AGA G L
Sbjct: 147 GIALARQGVMTEATEVLRR----------------ALQLAP-----ADAGAWNNFGIVLA 185
Query: 349 QASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 403
+ A E AL+ P N NA G S+ +A +L P+
Sbjct: 186 EQGRFGEAVEAYRRALELAPNQPEAHNNFGNACKELGQFESAVAAYRRAVELRPD 240
>gi|257060651|ref|YP_003138539.1| family 2 glycosyl transferase [Cyanothece sp. PCC 8802]
gi|256590817|gb|ACV01704.1| glycosyl transferase family 2 [Cyanothece sp. PCC 8802]
Length = 1252
Score = 45.4 bits (106), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 70/176 (39%), Gaps = 4/176 (2%)
Query: 241 MQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQ 300
++ + A W +LG + + + +I+ L ++PN NLG Q E+
Sbjct: 686 LKVQPKSAKAWMSLGNLYQEKKQFSQAINAYQQALLLEPNLVAVYNNLGYVLQQQSQWEE 745
Query: 301 SAKCFQDLILKDQNHPAALINYAALLLCKYG----SVLAGAGANTGEGACLDQASAVNVA 356
+ C+Q + N A IN A +L + + A N G +Q + A
Sbjct: 746 AISCYQKALEIQPNCVEAEINLANVLHSQNKLPPEQQIQYAQLNLQLGIKQEQQGNLATA 805
Query: 357 KECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVA 412
EC +K P++A I+ NL A+ G + + A L P T +++
Sbjct: 806 IECYQQGIKLQPESAEIYHNLGVAWQKQGKLEEAIAAYQNALDLNPQQGKTYFSLG 861
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 44/80 (55%)
Query: 247 QAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQ 306
QA++ N LG++L + + + SI+ L++ PN D +LGIA+ + ++E++ + +Q
Sbjct: 56 QAMILNNLGIVLQEKQQFEESINCYYQALSIKPNWADVHNDLGIAFEKLDNLEEAFQHYQ 115
Query: 307 DLILKDQNHPAALINYAALL 326
+ + N A N +L
Sbjct: 116 KALTLNPNLAQASFNIGNIL 135
>gi|443328425|ref|ZP_21057023.1| tetratricopeptide repeat protein [Xenococcus sp. PCC 7305]
gi|442792010|gb|ELS01499.1| tetratricopeptide repeat protein [Xenococcus sp. PCC 7305]
Length = 1259
Score = 45.4 bits (106), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 106/289 (36%), Gaps = 40/289 (13%)
Query: 248 AVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQD 307
A + T G IL K G++ +IS L V P + NLG Y Q + +S +Q
Sbjct: 166 APAYKTKGNILQKIGKIAEAISCYHQALGVAPEFVEVYANLGGIYAQQQEWSKSVDAYQR 225
Query: 308 LILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKAD 367
I N A N A V G AC QA + L KA
Sbjct: 226 AIEIKPNFAGAYRNLA--------KVWYKQGQKEKAIACTYQALS--------LEPEKAS 269
Query: 368 PKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQEPTE 427
P+ H N+ G + +C E+A KL+P ++ VA ++ + Q +
Sbjct: 270 PQIHH---NIGVELLQLGQIEEASQCFERAVKLDP-----QFIVAYQKLAETLEEQGKWQ 321
Query: 428 QLSWAGNEMASILREGDPVQIEPPIAWAGFAAVQKT----------HHEVAAAFETEENE 477
Q + + + + E + EPP + Q+T ++ A E +
Sbjct: 322 QAALSYRQALVLSPEPSEITAEPP----ATPSHQETEVNLLSQGTGQDKIVQAIERYQLA 377
Query: 478 LSKMEECA--GAGESAFLDQASAVNVAKECLLAALKADPKAAHIWANLA 524
++K + A A + Q A A+K DP A ++ NLA
Sbjct: 378 IAKEPDSAEHYANLGSLYAQKQQWEEAITVYQQAIKVDPNFAGVYRNLA 426
>gi|260222435|emb|CBA31996.1| hypothetical protein Csp_D29910 [Curvibacter putative symbiont of
Hydra magnipapillata]
Length = 1449
Score = 45.4 bits (106), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 68/178 (38%), Gaps = 13/178 (7%)
Query: 252 NTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILK 311
N LG++ G Q ++ + L+A+ P N G+A G +E +A+ +Q +
Sbjct: 31 NNLGILCNSMGEHQQALGLFEQLIALVPQESKAHANRGVALKALGRLEDAAQAYQHALTL 90
Query: 312 DQNHPAALINYAALLLCK--------YGSVLAGAGANTGE-----GACLDQASAVNVAKE 358
D +A N LL + Y + GE CL + + A+
Sbjct: 91 DPRFHSAHNNLGNLLYSQGAFDKALNYFETASSLQPQLGEYRFMLAKCLLELQQMERARS 150
Query: 359 CLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRI 416
L L+ADP A W LA + + C E+ + P+ Y ++R+
Sbjct: 151 ELTLVLRADPTNADAWGTLARLWSEKHAMPEALACFERGIAVRPDYAGLIYNRGLARL 208
>gi|404497258|ref|YP_006721364.1| TPR domain-containing protein [Geobacter metallireducens GS-15]
gi|418065850|ref|ZP_12703220.1| Tetratricopeptide TPR_2 repeat protein [Geobacter metallireducens
RCH3]
gi|78194861|gb|ABB32628.1| TPR domain protein [Geobacter metallireducens GS-15]
gi|373561648|gb|EHP87879.1| Tetratricopeptide TPR_2 repeat protein [Geobacter metallireducens
RCH3]
Length = 267
Score = 45.4 bits (106), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 74/177 (41%), Gaps = 24/177 (13%)
Query: 254 LGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQ 313
+G I + G+ + +++ ++A+DP+N D N+G+ Y +++ K F+ + D
Sbjct: 79 VGDIKFELGQYKEALAAYQRVVALDPDNSDAHVNIGLVYNSLERTQKAIKAFEKALEID- 137
Query: 314 NHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHI 373
PA + Y L YG LD+ A ++ DP A
Sbjct: 138 --PANVFAYNGLGDAWYG---------------LDEHEKAIAA---FQKGIELDPDDAAA 177
Query: 374 WANLANAYYLTGDH-RSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQEPTEQL 429
NL YY G+H + +CLE A +L+P S Y S D ER ++ L
Sbjct: 178 HFNLGELYYDLGEHDEAEHECLE-AVRLDP-AFSMSYLTLGSLYMDNERVKDAIRYL 232
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 31/175 (17%), Positives = 71/175 (40%), Gaps = 21/175 (12%)
Query: 235 SKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQ 294
++ +E ++ + A + LG L + G+LQ ++ L + P++ D + +G F+
Sbjct: 26 AQFRECVEREPDNAEGYFYLGEALSEEGKLQDALKEYEKGLKLAPDDLDALTAVGDIKFE 85
Query: 295 SGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVN 354
G +++ +Q ++ D ++ A +N G +
Sbjct: 86 LGQYKEALAAYQRVVALDPDNSDAHVNI---------------------GLVYNSLERTQ 124
Query: 355 VAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRY 409
A + AL+ DP + L +A+Y +H + +K +L+P+ + +
Sbjct: 125 KAIKAFEKALEIDPANVFAYNGLGDAWYGLDEHEKAIAAFQKGIELDPDDAAAHF 179
Score = 38.5 bits (88), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 65/174 (37%), Gaps = 23/174 (13%)
Query: 152 KMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCL 211
+ P NA +F LG G+ A+ YEK +A +L +L +
Sbjct: 34 REPDNAEGYFYLGEALSEEGKLQDALKEYEKG--------LKLAPDDLDALTAVG----- 80
Query: 212 LPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVL 271
D + E + +E L+ + + D + +GL+ R Q +I
Sbjct: 81 ----------DIKFELGQYKEALAAYQRVVALDPDNSDAHVNIGLVYNSLERTQKAIKAF 130
Query: 272 SSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAAL 325
L +DP N LG A++ + E++ FQ I D + AA N L
Sbjct: 131 EKALEIDPANVFAYNGLGDAWYGLDEHEKAIAAFQKGIELDPDDAAAHFNLGEL 184
>gi|359461418|ref|ZP_09249981.1| TPR domain-containing protein [Acaryochloris sp. CCMEE 5410]
Length = 784
Score = 45.4 bits (106), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 41/189 (21%), Positives = 78/189 (41%), Gaps = 23/189 (12%)
Query: 153 MPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLL 212
+P A+F G Y++ G+ +A+ Y +A I C ++ ++ +
Sbjct: 94 LPDYDEAYFQRGNSYRQRGEFQRAIQDYSQAIRINPYC------------IKAYYKRA-- 139
Query: 213 PESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLS 272
D E + L+ + + + A + G+ L +SG L+ +I +
Sbjct: 140 ---------DSRAELGDHPGALTDFSQVILRLPKDANAYCQRGMFLSQSGELEKAIEDFT 190
Query: 273 SLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGS 332
S + +P D + G Q G+ E+++K F + +L D NH AA AL + K
Sbjct: 191 SAIEHNPRLADAYFHRGYCLAQMGEAEKASKDFSEALLHDPNHQAAYTRAYALGMLKEAP 250
Query: 333 VLAGAGANT 341
V + ++T
Sbjct: 251 VDVSSPSST 259
>gi|326430815|gb|EGD76385.1| tetratricopeptide protein [Salpingoeca sp. ATCC 50818]
Length = 809
Score = 45.4 bits (106), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 99/248 (39%), Gaps = 30/248 (12%)
Query: 163 LGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLD 222
+GL+ G+ +A++ YE A I LR E + + E ++ + + + + D ++
Sbjct: 276 VGLVLNEFGEHDRAIAYYEAALAIRLRTEGE--KGENVAALYNNLGEAYRHKGECDKAV- 332
Query: 223 KELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAV----- 277
++L + L E S A +N LG G +I LA+
Sbjct: 333 -AFYEKDLAITVETLGEKHPS---TATTYNGLGTAYGDKGDYDRAIECFEKALAIYVEML 388
Query: 278 ---DPNNCDCIGNLGIAYFQSGDMEQSAKCFQ-DLILK----DQNHPAALINYAALLLCK 329
P+ NLG AY+ GD +++ ++ DL + + HP +Y L +
Sbjct: 389 GEKHPSTASTYNNLGSAYYSKGDYDKAIAFYEKDLAITVETLGEKHPGTADSYLGLGVAY 448
Query: 330 YGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRS 389
Y N ++A A+ V E L + P A + NL N YY G++
Sbjct: 449 YSK-----SENDEAIQLYEKALAIKV--ETLG---EKHPSTAETYNNLGNTYYSKGEYDK 498
Query: 390 SGKCLEKA 397
+ + EKA
Sbjct: 499 AIQLYEKA 506
>gi|116749303|ref|YP_845990.1| TPR repeat-containing protein [Syntrophobacter fumaroxidans MPOB]
gi|116698367|gb|ABK17555.1| Tetratricopeptide TPR_2 repeat protein [Syntrophobacter
fumaroxidans MPOB]
Length = 686
Score = 45.4 bits (106), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 80/180 (44%), Gaps = 21/180 (11%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
+EE +E+++ R + N LGL+L + G+ + + + LA+ P+ + NL
Sbjct: 486 RVEEAEKHYREAVRLQPRASNFRNNLGLVLGRQGKTEEAEAEYREALAIRPDYANAHNNL 545
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLD 348
G+ Q G E++ +++ + AA Y++ A+ G CL
Sbjct: 546 GVLLAQKGKTEEAIAHYREAL-------AARPGYSS--------------AHNNWGYCLM 584
Query: 349 QASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTR 408
A V A +AAL+ P A+I ANL A+ + + E+A +L P+ ++ R
Sbjct: 585 MADRVEEAIPHFIAALRLKPDDANIHANLGTAFVKQRNPDRAVMHFEEAIRLAPSNINVR 644
>gi|394988745|ref|ZP_10381580.1| hypothetical protein SCD_01151 [Sulfuricella denitrificans skB26]
gi|393792124|dbj|GAB71219.1| hypothetical protein SCD_01151 [Sulfuricella denitrificans skB26]
Length = 795
Score = 45.4 bits (106), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 72/171 (42%), Gaps = 26/171 (15%)
Query: 139 VSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPE 198
+ SL+ GLV + P +A L +YQR G KA++ YE + EA
Sbjct: 632 IHSLQQGLVAI----PGDARMSMSLAELYQRSGDNDKAIAEYEAVLKKTPGIEA------ 681
Query: 199 LLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLIL 258
++ LL E SLDK LE L + ++ A V +TLG I
Sbjct: 682 -----AANNLASLLTEKGDKASLDKALE----------LAKHFENSATPAFV-DTLGWIY 725
Query: 259 LKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLI 309
KSG+ ++ +L P +LG+A ++ GDM+ + Q ++
Sbjct: 726 YKSGQNDQALPLLQKAADKAPQAVIFQYHLGMALYKKGDMKAAKTALQKVV 776
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 71/316 (22%), Positives = 121/316 (38%), Gaps = 51/316 (16%)
Query: 225 LEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDC 284
LE + ++ + K +Q D + A + G++ + + S L ++P + D
Sbjct: 42 LEQADYDKARVEFKNVLQIDPKNADAYYMSGVLEEEQNNWPKAYGNYSKALELNPEHLDA 101
Query: 285 IGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEG 344
LG Y S D ++ K +++ K PAA AAL+ A G
Sbjct: 102 KAKLGKIYLLSNDAVKAEKMVNEILAKKPADPAAHTLKAALM------------ARKG-- 147
Query: 345 ACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNC 404
D+A A+ A + ++ ADP + LA Y GD + + LEK K P
Sbjct: 148 ---DEAGAIQEASQVVV----ADPTQFEAVSLLAALYTKKGDEAKAKEVLEKGIKDNPRN 200
Query: 405 MSTRYAVAVSRIKDAERSQEPTEQLSWAGNEMASILRE------GDPVQIEPPIAWAGFA 458
+S R ++ ++ N+MAS ++ DP ++E I A F
Sbjct: 201 VSLRMSLV---------------SIATKHNDMASAEKQLIEIIAIDPKKLEYRITLATFY 245
Query: 459 A----VQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKADP 514
A V K + + + + ++ A FL A++ LL+ ++ P
Sbjct: 246 ARTNQVDKAEKSLRDTIQADPEDETRYLLLA-----EFLATRKGPEEAEKELLSVIQNKP 300
Query: 515 KAAHIWANLANAYYLT 530
KA + LA Y T
Sbjct: 301 KAYKVRFGLAKIYQAT 316
>gi|301059880|ref|ZP_07200771.1| tetratricopeptide repeat protein [delta proteobacterium NaphS2]
gi|300446030|gb|EFK09904.1| tetratricopeptide repeat protein [delta proteobacterium NaphS2]
Length = 206
Score = 45.4 bits (106), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 74/176 (42%), Gaps = 21/176 (11%)
Query: 225 LEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDC 284
+E +L+E + +++++ R + LG I K G L+ + + ++P
Sbjct: 36 MEQGKLDEAIGAFNDAIENSGRMFEAYVNLGYIYFKQGDLERVVYANQQAIEIEPRYARG 95
Query: 285 IGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEG 344
NLG AY Q E++ K L++ + +P + Y+ L + TGE
Sbjct: 96 YANLGFAYLQMLRTEEAIKA---LVIAIELNPEIIQAYSNLTNAYLQNDEIEKAIETGE- 151
Query: 345 ACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKL 400
K LA P+ A NLA+AYY GD+ + + L+KA +L
Sbjct: 152 ------------KMVALA-----PEFALGLNNLASAYYNKGDYAKAIENLDKAVEL 190
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 71/178 (39%), Gaps = 21/178 (11%)
Query: 225 LEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDC 284
++P++ EE + + K+ DT A G+ L++ G+L +I + + +
Sbjct: 2 IKPKDSEEFIYQQKQIRDEDTECASTSYNDGVSLMEQGKLDEAIGAFNDAIENSGRMFEA 61
Query: 285 IGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEG 344
NLG YF+ GD+E+ Q I + P YA L G
Sbjct: 62 YVNLGYIYFKQGDLERVVYANQQAI---EIEPRYARGYANL------------------G 100
Query: 345 ACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 402
Q A + L+ A++ +P+ ++NL NAY + + + EK L P
Sbjct: 101 FAYLQMLRTEEAIKALVIAIELNPEIIQAYSNLTNAYLQNDEIEKAIETGEKMVALAP 158
>gi|299131799|ref|ZP_07024994.1| Tetratricopeptide TPR_2 repeat protein [Afipia sp. 1NLS2]
gi|298591936|gb|EFI52136.1| Tetratricopeptide TPR_2 repeat protein [Afipia sp. 1NLS2]
Length = 624
Score = 45.4 bits (106), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 26/126 (20%), Positives = 57/126 (45%), Gaps = 8/126 (6%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
L E ++++ +Q + +G++ +++GRL + ++ +A++ N + GN
Sbjct: 35 RLAEAEGYYRQALGGQRQQPDALHLIGVVFMQTGRLAQGVELIRRAIALNGTNAEYFGNF 94
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLD 348
G + GD++ +A ++ I + AA + YG+VL G G C
Sbjct: 95 GTGLSRLGDLDGAADAYRRAIALNPGFAAAFHD--------YGNVLLGQGKPDEALTCYT 146
Query: 349 QASAVN 354
+A ++
Sbjct: 147 RAIGID 152
>gi|332881964|ref|ZP_08449605.1| tetratricopeptide repeat protein [Capnocytophaga sp. oral taxon 329
str. F0087]
gi|332680090|gb|EGJ53046.1| tetratricopeptide repeat protein [Capnocytophaga sp. oral taxon 329
str. F0087]
Length = 449
Score = 45.4 bits (106), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 53/142 (37%), Gaps = 18/142 (12%)
Query: 284 CIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL---------LCKYGSVL 334
C+G L I D++ + +CF I+ D A A +L + Y L
Sbjct: 204 CLGKLYIT---DDDLKNALRCFDFAIISDDTFTGAYFEKARVLEAMEQYEKAIENYKITL 260
Query: 335 A----GAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSS 390
A G C ++ A+E A DP+ W LA+ YYL H +
Sbjct: 261 TLDDPSALVYLHIGRCYEKMRNDQKAEEYYFRATHEDPQLGKAWITLADFYYLRRKHDKA 320
Query: 391 GKCLEKAAKLEPN--CMSTRYA 410
K ++K EPN RYA
Sbjct: 321 LKYIQKLLSFEPNEPYYWRRYA 342
>gi|356960818|ref|ZP_09063800.1| TPR repeat-containing protein [gamma proteobacterium SCGC
AAA001-B15]
Length = 286
Score = 45.4 bits (106), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 47/223 (21%), Positives = 97/223 (43%), Gaps = 35/223 (15%)
Query: 131 SSSSREEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRC 190
S+ +E + +++T + + P + + G+ Y+ +G+ +AV S+EKA I
Sbjct: 19 SNGQIQEALDTVET----LTKDYPNEPLLYNISGICYKTIGKLDEAVKSFEKALAI---- 70
Query: 191 EADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVV 250
+P+ ++H+ L + G +L+ + K++++ A
Sbjct: 71 -----KPDY---AEVHYNLGLTLQDLG-----------QLDAAVKCYKKALEIKPDYANA 111
Query: 251 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 310
N LG+ L G+L +++ +A+ P+ + NLG + + G M+ + KC++ +
Sbjct: 112 CNNLGVTLQDLGQLDAAVKSYEQAIAIKPDFVEAYYNLGGTFQELGQMDAAVKCYEKALA 171
Query: 311 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAV 353
++ A N G+VL G G C +QA A+
Sbjct: 172 IKPDYAEAHYN--------LGNVLKNLGQLNGAVKCYEQALAI 206
Score = 38.9 bits (89), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 35/191 (18%), Positives = 72/191 (37%), Gaps = 21/191 (10%)
Query: 219 NSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVD 278
NSL +++E L ++ + + +++N G+ G+L ++ LA+
Sbjct: 12 NSLIALYSNGQIQEALDTVETLTKDYPNEPLLYNISGICYKTIGKLDEAVKSFEKALAIK 71
Query: 279 PNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAG 338
P+ + NLG+ G ++ + KC++ + ++ A
Sbjct: 72 PDYAEVHYNLGLTLQDLGQLDAAVKCYKKALEIKPDY---------------------AN 110
Query: 339 ANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAA 398
A G L ++ A + A+ P + NL + G ++ KC EKA
Sbjct: 111 ACNNLGVTLQDLGQLDAAVKSYEQAIAIKPDFVEAYYNLGGTFQELGQMDAAVKCYEKAL 170
Query: 399 KLEPNCMSTRY 409
++P+ Y
Sbjct: 171 AIKPDYAEAHY 181
>gi|333985572|ref|YP_004514782.1| type 11 methyltransferase [Methylomonas methanica MC09]
gi|333809613|gb|AEG02283.1| Methyltransferase type 11 [Methylomonas methanica MC09]
Length = 445
Score = 45.4 bits (106), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 73/175 (41%), Gaps = 24/175 (13%)
Query: 226 EPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCI 285
+ EL++ + ++ R + LGL++ + G Q +I ++ +A P D
Sbjct: 26 QARELDDAEELYRTILEQHPRFPEALHFLGLLMHQKGDNQQAIGLIEQAIAEAPAYSDAH 85
Query: 286 GNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGA 345
NLG + + D E++A+ + + + + AA N+ G
Sbjct: 86 NNLGNIFNRLEDFEKAAQSYSQALDLNPENVAAFNNF---------------------GV 124
Query: 346 CLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKL 400
L Q + ++ A E A+ P+ A + NL NAY G+ GKC+E K+
Sbjct: 125 VLSQLARIDDAIEAFTKAIALMPENAEFYRNLGNAYKKQGEF---GKCIEAYRKV 176
Score = 38.5 bits (88), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 20/88 (22%), Positives = 43/88 (48%), Gaps = 1/88 (1%)
Query: 228 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 287
E+ E+ +++ + +N G++L + R+ +I + +A+ P N + N
Sbjct: 96 EDFEKAAQSYSQALDLNPENVAAFNNFGVVLSQLARIDDAIEAFTKAIALMPENAEFYRN 155
Query: 288 LGIAYFQSGDMEQSAKCFQDLI-LKDQN 314
LG AY + G+ + + ++ +I LK N
Sbjct: 156 LGNAYKKQGEFGKCIEAYRKVIGLKPYN 183
>gi|407714420|ref|YP_006834985.1| hypothetical protein BUPH_03230 [Burkholderia phenoliruptrix
BR3459a]
gi|407236604|gb|AFT86803.1| tetratricopeptide repeat-containing protein [Burkholderia
phenoliruptrix BR3459a]
Length = 615
Score = 45.4 bits (106), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 72/170 (42%), Gaps = 25/170 (14%)
Query: 254 LGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQ-DLILKD 312
LG L G++ +I+ + L + P+ NLG AY +G E +A F+ L L+
Sbjct: 75 LGNALKALGQIDEAIAQFRNALTLAPSFPMAHYNLGNAYAAAGRHEDAADAFRRSLRLQP 134
Query: 313 QN----------------HPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVA 356
+ H A+ ++ L + G AGA G L+ + A
Sbjct: 135 DDASSHNNLGNALHALGRHEEAIASFRRTLELRPGH----AGALNNMGMSLNALGRADEA 190
Query: 357 KECLLAALKADPK--AAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNC 404
C AAL A+P+ AAH NLAN + TG H + E A L+PN
Sbjct: 191 IPCFEAALAAEPRFVAAHF--NLANTFDATGRHAQAVASFEAALALQPNL 238
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 77/189 (40%), Gaps = 13/189 (6%)
Query: 231 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 290
E+ + S++ A N LG L GR + +I+ L + P + + N+G+
Sbjct: 120 EDAADAFRRSLRLQPDDASSHNNLGNALHALGRHEEAIASFRRTLELRPGHAGALNNMGM 179
Query: 291 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYA---------ALLLCKYGSVLA----GA 337
+ G +++ CF+ + + AA N A A + + + LA
Sbjct: 180 SLNALGRADEAIPCFEAALAAEPRFVAAHFNLANTFDATGRHAQAVASFEAALALQPNLP 239
Query: 338 GANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKA 397
A G G L A L ++ DP+ A W L +A+ G H ++ + ++A
Sbjct: 240 PAIFGMGNALAALGRHTEAIPYLERSVGLDPQFALAWLCLGSAHQALGAHATALRAFDQA 299
Query: 398 AKLEPNCMS 406
+L+P+ S
Sbjct: 300 LRLQPDLAS 308
>gi|414078285|ref|YP_006997603.1| hypothetical protein ANA_C13102 [Anabaena sp. 90]
gi|413971701|gb|AFW95790.1| TPR repeat-containing protein [Anabaena sp. 90]
Length = 1342
Score = 45.4 bits (106), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 81/197 (41%), Gaps = 25/197 (12%)
Query: 228 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 287
E+ ++ + E+++ D ++ + N G L+ + +I + + +DP N G
Sbjct: 1055 EDYKQAIDNYTEAIKIDPKKII--NLRGAAYLQLKEYKLAIDDYNQAIQLDPKNAIYYGT 1112
Query: 288 LGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL 347
G AY Q D +Q+ + D H A+ L ++ G G
Sbjct: 1113 RGDAYLQLKDYKQA--------INDYTH--------AIQLDPKNAIYYGT-----RGFAY 1151
Query: 348 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 407
Q +A A+K DPK A ++ +AY+ DH+ + +A KL+P+
Sbjct: 1152 LQLKDYKLAINDYTQAIKIDPKNATYYSARGDAYFQLKDHKQAIDDYTQAIKLKPDFTEA 1211
Query: 408 RYAVAVSR--IKDAERS 422
Y ++ +KD +++
Sbjct: 1212 YYVRGIAHYFLKDYKQA 1228
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 75/158 (47%), Gaps = 11/158 (6%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEI------LLRCEADIARPEL-LSLVQIH 206
PKNA+ + G+ + L +A+ +Y +A +I LR A + E L++ +
Sbjct: 1038 PKNANYYSGRGIAHHFLEDYKQAIDNYTEAIKIDPKKIINLRGAAYLQLKEYKLAIDDYN 1097
Query: 207 HAQCLLPESS---GDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGR 263
A L P+++ G D L+ ++ ++ ++ ++Q D + A+ + T G L+
Sbjct: 1098 QAIQLDPKNAIYYGTRG-DAYLQLKDYKQAINDYTHAIQLDPKNAIYYGTRGFAYLQLKD 1156
Query: 264 LQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQS 301
+ +I+ + + +DP N G AYFQ D +Q+
Sbjct: 1157 YKLAINDYTQAIKIDPKNATYYSARGDAYFQLKDHKQA 1194
>gi|226496177|ref|NP_001145720.1| uncharacterized protein LOC100279224 [Zea mays]
gi|224029355|gb|ACN33753.1| unknown [Zea mays]
gi|414886537|tpg|DAA62551.1| TPA: hypothetical protein ZEAMMB73_083629 [Zea mays]
Length = 321
Score = 45.4 bits (106), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 62/135 (45%)
Query: 184 EEILLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQS 243
++L+R E D++ EL V+ A G L ++ P ++ + + + +
Sbjct: 163 RQVLVRRELDLSAKELQEQVRSGDASATEYFELGAVMLRRKFYPAAIKYLQQAIDKWDRD 222
Query: 244 DTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAK 303
+ A V+N LG+ + +L +I + + P NLG AY Q D++ + K
Sbjct: 223 EQDLAQVYNALGVSYKRENKLDKAIQQFQKAVELQPGYVTAWNNLGDAYEQQKDLKSALK 282
Query: 304 CFQDLILKDQNHPAA 318
F++++L D N+ A
Sbjct: 283 AFEEVLLFDPNNKVA 297
>gi|116075659|ref|ZP_01472918.1| TPR repeat [Synechococcus sp. RS9916]
gi|116066974|gb|EAU72729.1| TPR repeat [Synechococcus sp. RS9916]
Length = 734
Score = 45.4 bits (106), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 79/201 (39%), Gaps = 15/201 (7%)
Query: 230 LEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLG 289
E++ L+ +++ LGL L + G L ++I+ + L + PN + NLG
Sbjct: 81 FSELIKLLRRTLEIKPNYPEAHYNLGLALKEQGDLTAAIASYNKALQLRPNYPEAHNNLG 140
Query: 290 IAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAG----------- 338
AY GD+ + + + + N P N ++L K G A
Sbjct: 141 NAYKDQGDLTAAIASYNSALQLNPNDPETH-NNLGVVLKKQGDPTAAITSYHQALQLQPN 199
Query: 339 ---ANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLE 395
A+ G + + A AL+ P A + NL NA GD ++
Sbjct: 200 YPEAHYNLGIAFKEQGDLTAAIASYNKALQLKPNDADTYNNLGNALKEQGDLTAAIDSFN 259
Query: 396 KAAKLEPNCMSTRYAVAVSRI 416
KA +L+PN ++ A++ +
Sbjct: 260 KALQLKPNFPDAQWNSALTML 280
Score = 42.7 bits (99), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 84/220 (38%), Gaps = 18/220 (8%)
Query: 206 HHAQCLLPESSGDNSLDKE-----LEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLK 260
H ++ L +SS D+ + +E ++ L+E S +E + + T +V+ L +
Sbjct: 18 HTSRKKLGQSSEDHFIKEEEAVALMDQGRLQEAESIYRELIAAGTNNHIVYGNLAALCGM 77
Query: 261 SGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALI 320
GR I +L L + PN + NLG+A + GD+ + + + N+P A
Sbjct: 78 QGRFSELIKLLRRTLEIKPNYPEAHYNLGLALKEQGDLTAAIASYNKALQLRPNYPEAHN 137
Query: 321 NYA---------ALLLCKYGSVLA----GAGANTGEGACLDQASAVNVAKECLLAALKAD 367
N + Y S L + G L + A AL+
Sbjct: 138 NLGNAYKDQGDLTAAIASYNSALQLNPNDPETHNNLGVVLKKQGDPTAAITSYHQALQLQ 197
Query: 368 PKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 407
P NL A+ GD ++ KA +L+PN T
Sbjct: 198 PNYPEAHYNLGIAFKEQGDLTAAIASYNKALQLKPNDADT 237
>gi|432331042|ref|YP_007249185.1| tetratricopeptide repeat protein [Methanoregula formicicum SMSP]
gi|432137751|gb|AGB02678.1| tetratricopeptide repeat protein [Methanoregula formicicum SMSP]
Length = 4078
Score = 45.4 bits (106), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 97/239 (40%), Gaps = 38/239 (15%)
Query: 100 LGKCRSRISSK------MDSALEFGVDADGD---QSGLGTSSSSREEKVSSLKTGLVHVA 150
LGK RSR+ D AL + +DG+ + G+ + R E+ + L
Sbjct: 2936 LGKARSRLGQFEMAIRIYDHALTL-LPSDGEFLLEKGIALAHLERHEEAEVV---LGQST 2991
Query: 151 RKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQC 210
++P FL GL G+ AV S++KA L + DI + +SL + A+
Sbjct: 2992 ERLPDRFEPPFLRGLSLMLTGRYDDAVRSFDKALA-LNETDPDIWYHKAISLAHLGRAEE 3050
Query: 211 LLPESSGDNSLDK--ELEPEELEEILSK---------LKESMQSDTR-------QAVVWN 252
+P + DK L P++ E L + +++S R A W+
Sbjct: 3051 AVP------AFDKVLGLRPDDAEAFLGRGRAYYTLKSFDRAIESFDRVIGYLPQHAAAWH 3104
Query: 253 TLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILK 311
G+ L GR + +I+ L D N D + +AY G ++ + F+ L+ +
Sbjct: 3105 EKGMALYDLGRYEEAIAAFDKTLEEDGGNHDALYYCALAYAAIGKDAEAVESFELLLTR 3163
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 64/316 (20%), Positives = 114/316 (36%), Gaps = 50/316 (15%)
Query: 137 EKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIAR 196
E +SS + + P +A +H+ GL Q G+ KA+ SY++A +
Sbjct: 2404 EAISSFDYTIQYA----PDHAQSHYRRGLALQAQGKYEKAIRSYKQA----------LTH 2449
Query: 197 PELLSLVQIHHAQCLLPESSGDNSL---DKELE--PEE----------------LEEILS 235
++ C + D +L D+ LE PE EE L+
Sbjct: 2450 DGSITDAVYQTGLCYAALNKNDQALKTFDRVLETLPERADILFHKSRALFRLMRYEEALT 2509
Query: 236 KLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQS 295
+ S+ + VW G L + GR + S+ LA++P++ C G +
Sbjct: 2510 AIDASLAIENNDVAVWEQKGSTLYELGRFEESLEAYDRSLALNPDSITCWYLKGRSLSDL 2569
Query: 296 GDMEQSAKCFQDLILKDQNHPAALINYAALLLC--KYGSVLAG-----------AGANTG 342
E++ CF +I D+ A + + LL K+ + A
Sbjct: 2570 ARYEEAIPCFDRVIETDETCAGAWLRKGSSLLSLGKFAPAIEALTRSLDLQPDNANGWYD 2629
Query: 343 EGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 402
G L + A A+ + K A+ W + A G + + E ++P
Sbjct: 2630 RGIALAELKQYEDAVASYDRAIAINRKYANAWYDKGVALVHLGRDTDAIQAFENTTAIDP 2689
Query: 403 NCMSTRY--AVAVSRI 416
M+ Y +A++R+
Sbjct: 2690 RFMNAFYDKGLALARL 2705
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 81/219 (36%), Gaps = 40/219 (18%)
Query: 137 EKVSSLKTGLVHVARKM----PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEA 192
EKV+ G +HV + PKN A F GL LG A+ S++K +IL
Sbjct: 1139 EKVNR-HEGAIHVFEILLEIDPKNGDAQFHKGLALAVLGDHRDAIGSFDKTLQIL----- 1192
Query: 193 DIARPELLSLVQIHHAQCLLPESS--GDNSLDKELEPEELEEILSKLKESMQSDTRQAVV 250
P+S+ N +E + + LK +++ +T
Sbjct: 1193 --------------------PDSAPAWYNKGKSLIEIGRYPDAIVALKRAIEIETSYTEA 1232
Query: 251 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 310
+ LG LLK+G +I L D +N N GIA +S E++ + F ++
Sbjct: 1233 FYYLGYALLKTGDYTGAIEAFDRNLTRDGSNAPGHFNRGIALEKSRRFEEALESFDKSLI 1292
Query: 311 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQ 349
D + AL G V A G + D+
Sbjct: 1293 YDPGN--------ALAFYHKGKVYADLGRHADAAFAFDK 1323
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 65/162 (40%), Gaps = 23/162 (14%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 213
P A A F G+ Y LG+ +AV+SY++A I P L I+H L
Sbjct: 411 PSCASAAFQQGVAYASLGRFSEAVASYDRALRI---------NPGLSD--AIYHKGFALS 459
Query: 214 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 273
+ E+ + + + ++ D + A ++ GL L+K GR +I
Sbjct: 460 KLG------------RTEDAVQEFERTVAFDPKNAKAFHQKGLQLVKIGRFDEAIEAFDE 507
Query: 274 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNH 315
LA+ P + G A + G E + + F I+ + +
Sbjct: 508 SLALKPGFAQAAFDKGAALIRLGKFEDALQAFDQAIVTNSKY 549
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 72/168 (42%), Gaps = 21/168 (12%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 213
P++A ++ G+ LG+ +A+ SY KA EI+ AR + ++ L
Sbjct: 139 PRHAKVYYNKGIALADLGRHQEAIYSYNKAIEIV----PGYARAYYNKGISLYELGNLDD 194
Query: 214 ESSGDNSLDKELEPEEL------EEILSKLKES----------MQSDTRQAVVWNTLGLI 257
S N EL+P+++ ILSK ++ + + A +W G+
Sbjct: 195 ALSAFNRA-AELDPDDIWVWYYRSFILSKQDQNEFAAQSAEKFLAQEPDHADIWAIRGMS 253
Query: 258 LLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCF 305
L K GR ++ L A++P+ D LG+A ++ + + + F
Sbjct: 254 LFKLGRYDEALDALRQATAINPDLSDAWYYLGLAGVETRQFDDAVEAF 301
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 99/271 (36%), Gaps = 50/271 (18%)
Query: 136 EEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRC-EADI 194
EE VS+L L A K+ + GL LG+ +AV S++KA EI RC A
Sbjct: 703 EEAVSTLNRALDENA----KDVYGWCYKGLALSALGRFDEAVRSFDKALEINRRCARAFF 758
Query: 195 ARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTL 254
R L + + L S D +L EL P++ + + K
Sbjct: 759 ERGNAL----LKLGKPLEAVVSYDQAL--ELSPDDPKILYQK------------------ 794
Query: 255 GLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQN 314
G+ L + R +I S LA++P N LG+AY + + + F + I D
Sbjct: 795 GMALTQRERFDEAIRAFESALALEPENASGAYYLGVAYAGRERYDDAIRAFDNAIALDPT 854
Query: 315 HPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIW 374
A +G L Q A L+ALK DP
Sbjct: 855 QGQAF---------------------HFKGIALVQRERYTEAITAFLSALKRDPDNPVTH 893
Query: 375 ANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 405
L AY +++ +A +L+P+ +
Sbjct: 894 YYLGLAYLQDKQFKNAIPEFSRATELDPSLL 924
Score = 39.7 bits (91), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 96/269 (35%), Gaps = 43/269 (15%)
Query: 144 TGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEI--LLRCEAD--IARPEL 199
T L MPK A H GL Y L Q AV SY++A EI L R A IA EL
Sbjct: 3835 TALDRALEIMPKKAILHDQKGLAYAALEQYRDAVQSYDRALEIEPLPRVFAHKGIALAEL 3894
Query: 200 LSLVQ--------IHH----AQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQ 247
I H A+ + + + L K + E+ E + D
Sbjct: 3895 GMYRDAIEAFDKAIEHDGNLAEAWMGKGNVQYDLGKYADAEKAYE------RGLALDPEN 3948
Query: 248 AVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQD 307
A W G++L + + ++ L +DP IAYF G + K +Q+
Sbjct: 3949 AEAWTRQGMVLSAQQKFEEALEHYDRALMIDP-------TFSIAYFTRGSALIAMKRYQE 4001
Query: 308 LILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKAD 367
A+ + A+L + V A +G L + A AL+ D
Sbjct: 4002 ----------AVEAFDAMLHIQPDFV----DAYIHKGRALQELELYQDALAVFKRALEID 4047
Query: 368 PKAAHIWANLANAYYLTGDHRSSGKCLEK 396
P W ++ + G H + C EK
Sbjct: 4048 PTRKECWNDIGDILDRIGKHEEARICYEK 4076
>gi|428217378|ref|YP_007101843.1| hypothetical protein Pse7367_1118 [Pseudanabaena sp. PCC 7367]
gi|427989160|gb|AFY69415.1| Tetratricopeptide TPR_2 repeat-containing protein [Pseudanabaena
sp. PCC 7367]
Length = 539
Score = 45.4 bits (106), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 60/286 (20%), Positives = 110/286 (38%), Gaps = 55/286 (19%)
Query: 158 HAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESSG 217
+ H+ LG+ Q +A+ +Y++A E+ D++ + + + G
Sbjct: 274 NVHYNLGVALTANDQIDRAIVAYQRATEL------DVSNADAFAAL-------------G 314
Query: 218 DNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAV 277
N L+K L E + + S++ + + + +N LGL L + G L +I+ +A+
Sbjct: 315 KNLLEKR----RLNEAANAFRRSVELNPNEPIAYNGLGLTLRRQGNLSGAITAYEQAIAL 370
Query: 278 DPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGA 337
+P NLG A + F+ D N+ A N LL +
Sbjct: 371 NPRYASAYNNLGRALSDQDRPADAIVAFRSATELDPNNSVAFSNLGQLLRTQ-------- 422
Query: 338 GANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKA 397
G +T A L+Q A+++ K P+ + NL A GD + +KA
Sbjct: 423 GDSTEAIAALEQ--AISLGK----------PELWSDYTNLGLALADQGDLTKAEAAYQKA 470
Query: 398 AKLEPNCMSTRYAV------------AVSRIKDAERSQEPTEQLSW 431
+L+P + + A++ K+A R E + W
Sbjct: 471 IELQPTFARAHFGMGALQTAQGNIRDAIAAYKEALRLYEAEDSTEW 516
>gi|414075408|ref|YP_006994726.1| TPR repeat domain-containing protein [Anabaena sp. 90]
gi|413968824|gb|AFW92913.1| TPR repeat domain-containing protein [Anabaena sp. 90]
Length = 755
Score = 45.4 bits (106), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 80/191 (41%), Gaps = 30/191 (15%)
Query: 228 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 287
++L+E ++ +E+++ + + A +N LG+ L +L +++ + +DP N
Sbjct: 214 KKLDEAVAAYQEAIKLNPKDATAYNNLGIALSDQKKLDEAVAAYQKAIELDPKYATAYYN 273
Query: 288 LGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL 347
LG A ++++ +Q I D KY + G + L
Sbjct: 274 LGNALSDQKKLDEAVAAYQKAIELD---------------PKYATAYYNLGNALSDQKKL 318
Query: 348 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHR--SSGKCLEKAAKLEPNCM 405
D+A A A++ DPK A + NL NA L G + + +KA +L P
Sbjct: 319 DEAVA------AYQKAIELDPKYATAYYNLGNA--LRGQKKLDEAVAAYQKAIELNP--- 367
Query: 406 STRYAVAVSRI 416
+YA A + +
Sbjct: 368 --KYATAYNNL 376
>gi|297538184|ref|YP_003673953.1| hypothetical protein M301_0992 [Methylotenera versatilis 301]
gi|297257531|gb|ADI29376.1| Tetratricopeptide TPR_2 repeat protein [Methylotenera versatilis
301]
Length = 1193
Score = 45.4 bits (106), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 56/271 (20%), Positives = 103/271 (38%), Gaps = 52/271 (19%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 213
P A AH+ LG + + L +A +SY+ A LR E D + + +L Q+ + Q
Sbjct: 137 PNFAKAHYNLGNVLKSLNSLEQAKASYKCA----LRIEVDNVQA-MCNLAQVLYEQDFFS 191
Query: 214 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 273
E+ + ++++ ++ + LG +G+L + +
Sbjct: 192 EA------------------IIYFQQALSIQDNFSIAYVGLGAAFQATGQLPGAEANFRK 233
Query: 274 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSV 333
+A++PN+ + + NLG G + ++ C++ L+ P Y K GS+
Sbjct: 234 AIAINPNDAEALSNLGGVLKTLGRLSEAEICYRTLLTIT---PENFDTY-----IKLGSL 285
Query: 334 LAGAGANTGEGACLDQASAVNV---------------------AKECLLAALKADPKAAH 372
L G AC +A ++N A+ C A+K +P
Sbjct: 286 LKSMGNIAESTACFKKALSINSQLEEAQNDLGLALAEQGRYSEAEACYQNAIKIEPNFWK 345
Query: 373 IWANLANAYYLTGDHRSSGKCLEKAAKLEPN 403
+ NL Y G + +KA L+ N
Sbjct: 346 AYNNLGLTLYNMGRFNEAEAAFDKAITLDAN 376
Score = 38.5 bits (88), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 63/167 (37%), Gaps = 30/167 (17%)
Query: 252 NTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILK 311
N LGL L + GR + + + + ++PN NLG+ + G ++ F I
Sbjct: 314 NDLGLALAEQGRYSEAEACYQNAIKIEPNFWKAYNNLGLTLYNMGRFNEAEAAFDKAITL 373
Query: 312 DQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVN----------------- 354
D N AL+ L G ACL +A VN
Sbjct: 374 DANE--------ALIYSNLSLPLVAQGQIKRAEACLRRAIEVNPEYVNAYINLGTNYLAQ 425
Query: 355 -VAKE---CLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKA 397
+AKE L ALK D K+ +NL +G H + + LE+A
Sbjct: 426 GLAKEAESVFLQALKFDQKSTKSKSNLLFTLNYSGGHSAEYR-LEQA 471
>gi|389580267|ref|ZP_10170294.1| cytochrome c biogenesis factor [Desulfobacter postgatei 2ac9]
gi|389401902|gb|EIM64124.1| cytochrome c biogenesis factor [Desulfobacter postgatei 2ac9]
Length = 763
Score = 45.4 bits (106), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 56/114 (49%), Gaps = 6/114 (5%)
Query: 217 GDNSLD-KELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLL 275
GD D +E + E+E K ++Q D + V LG +K+G+L+S+ ++ SS+
Sbjct: 37 GDEYFDAREYKKAEIE-----YKNALQIDNKDTAVLLKLGDTFMKTGQLKSAFALYSSVE 91
Query: 276 AVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCK 329
+DP N + + L YF + ++ +++ KD + AL +L+ K
Sbjct: 92 KLDPENIEALVKLSRFYFLDKKLPETQARIDNILKKDPQNLDALFLKGQVLIRK 145
>gi|334119969|ref|ZP_08494053.1| Tetratricopeptide TPR_1 repeat-containing protein [Microcoleus
vaginatus FGP-2]
gi|333457610|gb|EGK86233.1| Tetratricopeptide TPR_1 repeat-containing protein [Microcoleus
vaginatus FGP-2]
Length = 407
Score = 45.4 bits (106), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 41/191 (21%), Positives = 70/191 (36%), Gaps = 21/191 (10%)
Query: 231 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 290
++ ++ +++Q A WN G++L + R +I+ + PN D N G+
Sbjct: 196 QDAIAAYDQALQIQPDLADTWNNRGVVLTRMQRYPEAIASYEQATTIRPNYPDAWNNRGV 255
Query: 291 AYFQSGDMEQSAKCFQDLIL-----------------KDQNHPAALINYAALLLCKYGSV 333
+ +++ C++ I K Q + A+I+Y L K
Sbjct: 256 VLLELQKYQEAIGCYEQAIQAKPDYADAWNNRGVAFSKMQEYEQAVISYNHALQIKNDYT 315
Query: 334 LAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKC 393
A G L + A + A K P IW N A Y L G + +
Sbjct: 316 ----DAWNNRGVALSKLQKYEAAIDSYDNAAKIRPDFYRIWYNKARCYALQGKIELAIEN 371
Query: 394 LEKAAKLEPNC 404
L++A L PN
Sbjct: 372 LKRALNLNPNV 382
>gi|166368783|ref|YP_001661056.1| hypothetical protein MAE_60420 [Microcystis aeruginosa NIES-843]
gi|166091156|dbj|BAG05864.1| TPR repeat protein [Microcystis aeruginosa NIES-843]
Length = 631
Score = 45.4 bits (106), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 61/161 (37%), Gaps = 21/161 (13%)
Query: 254 LGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQ 313
LG+I+ G++ +I L ++PN + NLGI GD++++ CF I +Q
Sbjct: 6 LGVIMDSLGQIDQAILAYKQALLINPNYAEAHNNLGIIAVSKGDLDEAIICFNQAIRSNQ 65
Query: 314 NHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHI 373
N+ A A G L + A A++ +P
Sbjct: 66 NY---------------------AFAENNLGLVLQMQDKLGDAVVNFQEAIRKNPNYPEA 104
Query: 374 WANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVS 414
NL N L G + + A KL P + ++A++
Sbjct: 105 HFNLGNVLQLQGKTEEAIAYFQTAIKLNPKYIKAYNSLALA 145
>gi|158425090|ref|YP_001526382.1| hypothetical protein AZC_3466 [Azorhizobium caulinodans ORS 571]
gi|158331979|dbj|BAF89464.1| TPR repeat protein [Azorhizobium caulinodans ORS 571]
Length = 779
Score = 45.4 bits (106), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 41/86 (47%)
Query: 240 SMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDME 299
S++ D + +V + L L + GR+ +++ L A+DP N + + + G Q GD
Sbjct: 85 SLKRDPKNPIVQHMYALCLRQIGRIPEAVAALRISTALDPRNVEALADYGSLLLQMGDRA 144
Query: 300 QSAKCFQDLILKDQNHPAALINYAAL 325
+ + F+ + NHP A A L
Sbjct: 145 AAREAFEKALALRPNHPVAKAGIARL 170
>gi|434388288|ref|YP_007098899.1| tetratricopeptide repeat protein [Chamaesiphon minutus PCC 6605]
gi|428019278|gb|AFY95372.1| tetratricopeptide repeat protein [Chamaesiphon minutus PCC 6605]
Length = 1675
Score = 45.4 bits (106), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 68/180 (37%), Gaps = 17/180 (9%)
Query: 238 KESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGD 297
++S+ D WN G +L + G+++++I L +D NLG+A+F+
Sbjct: 250 EQSLHIDPSDRFAWNNHGQVLFQLGQIRAAIDAYQKALELDSQFYQAWNNLGVAHFEQKS 309
Query: 298 MEQSAKCFQDLILKDQNHPAALINYAALL--LCKYGSVLAGAGANTGEGACLDQASAVNV 355
+ + +C++ I AA N +L L + + LA T D+ A N
Sbjct: 310 FQDALRCYRAAIELAPEFQAAWCNQGKVLFFLGDFEAALAAYTKVTQLQPDFDR--AWNY 367
Query: 356 AKECLL-------------AALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 402
L K P+ A W+N N L + + C +A L P
Sbjct: 368 CGNILFHLGELEPALRRYEMVTKLQPQLAEGWSNRGNVLLLLDRPQEALTCYTQATTLAP 427
Score = 42.0 bits (97), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 40/198 (20%), Positives = 78/198 (39%), Gaps = 25/198 (12%)
Query: 228 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 287
E +E L +++++ + A+VW+ G LLK R +++V + ++ + +
Sbjct: 818 ESWDEALYSYQQALKLNASAAIVWHFQGKTLLKLQRYAEALTVYERAIELNSEDYHSWND 877
Query: 288 LGIAYFQSGDMEQSAKCFQDLI-LKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGAC 346
LG+ + G E + ++ I L+ HPA G L G G A
Sbjct: 878 LGLTFAHLGRSEDAIDSYRQAIELQPDYHPA---------WHNLGKELTQLGDTDGASAA 928
Query: 347 LDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMS 406
++A A + P+ A W + N + G+ + E+ L+P+
Sbjct: 929 YERAIAYH-------------PQDADTWYGMGNLLWQLGELSEAMFAYEQVTNLKPDRAE 975
Query: 407 TRY--AVAVSRIKDAERS 422
Y A+ ++ ER+
Sbjct: 976 AWYRQGKALQALQQWERA 993
>gi|15679580|ref|NP_276697.1| O-linked GlcNAc transferase [Methanothermobacter thermautotrophicus
str. Delta H]
gi|2622708|gb|AAB86058.1| O-linked GlcNAc transferase [Methanothermobacter thermautotrophicus
str. Delta H]
Length = 351
Score = 45.4 bits (106), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 73/160 (45%), Gaps = 21/160 (13%)
Query: 150 ARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLR-CEADIARPELLS-LVQIHH 207
A K+ + + G+M + G+PL+A+ SYE++ EI R E AR LLS L ++
Sbjct: 192 ALKIKHDPDLLYWRGVMLEVAGKPLEALESYERSLEIDPRNAEVWTARGNLLSDLGRMEE 251
Query: 208 A--------QCLLPESSGDNSLDKE----LEPEELEEILSKLKESMQSDTRQAVVWNTLG 255
A + L + N +++ LE E E L + +++ + V W +G
Sbjct: 252 AIESYNSALELALEDEQDPNVWNRKGNALLELERFNEALECYRRAIEMEPENDVYWTNMG 311
Query: 256 LILLKSGRLQSSISVLSSLLAVDPNNCD-------CIGNL 288
+ LL+ R ++ + L ++P N D C+ NL
Sbjct: 312 VALLELERFDEALEAFNRALMINPKNEDAGILREECLENL 351
>gi|209544340|ref|YP_002276569.1| sulfotransferase [Gluconacetobacter diazotrophicus PAl 5]
gi|209532017|gb|ACI51954.1| sulfotransferase [Gluconacetobacter diazotrophicus PAl 5]
Length = 648
Score = 45.4 bits (106), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 65/149 (43%), Gaps = 13/149 (8%)
Query: 254 LGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQ 313
LG I + G+ +S+I +L LA P N + LG+A +G E + CF+ +
Sbjct: 48 LGTIHARQGKFESAIPLLRRALARMPANAEGYNVLGMALRDAGQAEDAIACFRRAVAIRP 107
Query: 314 NHPAALINYAALLLCKYGSVLAGAGANTGEGACLD-QASAVNVAKECLLAALKADPKAAH 372
+H A N L+ G AGA A LD Q +A+ + AL ADP
Sbjct: 108 DHQGARTNLGNALVA--GGDRAGAIAQFRALLTLDTQLAAIADYR----TALAADP---- 157
Query: 373 IWANLANAYYLTGDHRSSGKCLEKAAKLE 401
A++ L R+ G+C E AA +
Sbjct: 158 --ADVETLIRLGAALRTIGRCEEAAAHFQ 184
>gi|427739904|ref|YP_007059448.1| hypothetical protein Riv7116_6574 [Rivularia sp. PCC 7116]
gi|427374945|gb|AFY58901.1| tetratricopeptide repeat protein [Rivularia sp. PCC 7116]
Length = 586
Score = 45.4 bits (106), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 44/207 (21%), Positives = 86/207 (41%), Gaps = 34/207 (16%)
Query: 228 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 287
+ L+E + + K++++ D + +N LG++ + +L+ +I+ + ++P N GN
Sbjct: 80 DRLDEAIVEFKKAIELDPNHSYAYNGLGMVYSEQNKLEKAINAYEKAVELNPKNIQASGN 139
Query: 288 LGIAYFQSGDMEQSAKCFQDLILKDQNHPAA--LI----NYAALLLCKYG---------- 331
LG Y + + + +Q +I D + P LI NY A +L + G
Sbjct: 140 LGNVYAYLNQWDNAIRVYQKVI--DISPPTRYDLIAWARNYKADVLIQMGREGEAIVEYE 197
Query: 332 ---SVLAGAGANTGE-------------GACLDQASAVNVAKECLLAALKADPKAAHIWA 375
+ A NT G+ L + + A A+K K++ ++
Sbjct: 198 RAIAEYQKATQNTPSDRKDLIASNHIRLGSLLSEMGRESEAIAEYEKAIKIGYKSSSLYY 257
Query: 376 NLANAYYLTGDHRSSGKCLEKAAKLEP 402
L AYYL + + + KA ++ P
Sbjct: 258 RLGKAYYLQSNFQQASYYYRKALEINP 284
>gi|186687238|ref|YP_001870381.1| TPR repeat-containing protein [Nostoc punctiforme PCC 73102]
gi|186469541|gb|ACC85340.1| Tetratricopeptide TPR_2 repeat protein [Nostoc punctiforme PCC
73102]
Length = 254
Score = 45.4 bits (106), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 83/185 (44%), Gaps = 27/185 (14%)
Query: 225 LEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDC 284
L+ L+ ++ +E++ + A V NT+G+I + + + +I + + L+++PN +
Sbjct: 20 LKSGNLDAVIECFREALLLNPNFAEVHNTIGMIQFQIEKYEGAIQLFDNALSMNPNFAEA 79
Query: 285 IGNLGIAYFQSGDMEQSAKCFQDL---ILKDQNHPAALINYAALLLCKYGSVLAGAGANT 341
N G+A + + K +D I + N A IN A Y ++ T
Sbjct: 80 YNNRGLARSKICHKSEFPKVIEDYTKAIALNPNLVQAYINRAD----TYKNL-------T 128
Query: 342 GE--GACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAK 399
G+ A LD + +++ CL A + N AN Y+L+G+ S LEK
Sbjct: 129 GDNPAAILDYSQVISLDPNCLSA-----------YINRANIYFLSGELEKSLSDLEKVLS 177
Query: 400 LEPNC 404
L+ +C
Sbjct: 178 LDTDC 182
>gi|386347974|ref|YP_006046223.1| hypothetical protein [Spirochaeta thermophila DSM 6578]
gi|339412941|gb|AEJ62506.1| Tetratricopeptide TPR_2 repeat-containing protein [Spirochaeta
thermophila DSM 6578]
Length = 918
Score = 45.4 bits (106), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 92/266 (34%), Gaps = 43/266 (16%)
Query: 255 GLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQN 314
G+I L+ R + + S L + + + NLG+ Y + GD ++ + F+ + D +
Sbjct: 52 GMIALRQDRNEEAKEAFSKALELGGEEAEALNNLGVIYRKEGDHRKAIEYFRKALAADPD 111
Query: 315 HPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIW 374
P L N A AC D A A+ AL+ DP +
Sbjct: 112 RPDILYNLA--------------------NACKD-AGLFEEAEAAYRKALEHDPHLVSAY 150
Query: 375 ANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQEPTEQLSWAGN 434
NLA Y G + LEK +P+ + Y + V ++ R +E L A
Sbjct: 151 NNLATLYQQRGALGKAVAVLEKGLTADPDHPTLLYNLGVLYQREG-RYEEARASLHRA-- 207
Query: 435 EMASILREGDPVQIEPPIAWA------GFAAVQKTHHEVAAAFETEENELSKMEECAGAG 488
+Q P W G + HHE A A E L + A
Sbjct: 208 -----------LQKRP--GWVEALNNLGIVEQSRGHHEAALACFREALTLDPLHAAAANN 254
Query: 489 ESAFLDQASAVNVAKECLLAALKADP 514
+ L A + + AL+ P
Sbjct: 255 MGSILALLGRYREAFDWFVQALRIQP 280
Score = 43.1 bits (100), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 78/187 (41%), Gaps = 25/187 (13%)
Query: 163 LGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELL-SLVQIHHAQCLLPESSGDNSL 221
LG++Y++ G KA+ + KA AD RP++L +L L E+
Sbjct: 85 LGVIYRKEGDHRKAIEYFRKA------LAADPDRPDILYNLANACKDAGLFEEAEAAYRK 138
Query: 222 DKELEPE----------------ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQ 265
E +P L + ++ L++ + +D + LG++ + GR +
Sbjct: 139 ALEHDPHLVSAYNNLATLYQQRGALGKAVAVLEKGLTADPDHPTLLYNLGVLYQREGRYE 198
Query: 266 SSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAAL 325
+ + L L P + + NLGI G E + CF++ + D H AA N ++
Sbjct: 199 EARASLHRALQKRPGWVEALNNLGIVEQSRGHHEAALACFREALTLDPLHAAAANNMGSI 258
Query: 326 --LLCKY 330
LL +Y
Sbjct: 259 LALLGRY 265
Score = 42.7 bits (99), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 68/178 (38%), Gaps = 24/178 (13%)
Query: 228 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 287
EE +E SK +++ +A N LG+I K G + +I LA DP+ D + N
Sbjct: 62 EEAKEAFSK---ALELGGEEAEALNNLGVIYRKEGDHRKAIEYFRKALAADPDRPDILYN 118
Query: 288 LGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL 347
L A +G E++ ++ + D + +A N A L
Sbjct: 119 LANACKDAGLFEEAEAAYRKALEHDPHLVSAYNNLATL---------------------Y 157
Query: 348 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 405
Q A+ A L L ADP + NL Y G + + L +A + P +
Sbjct: 158 QQRGALGKAVAVLEKGLTADPDHPTLLYNLGVLYQREGRYEEARASLHRALQKRPGWV 215
>gi|170078681|ref|YP_001735319.1| hypothetical protein SYNPCC7002_A2078 [Synechococcus sp. PCC 7002]
gi|169886350|gb|ACB00064.1| TPR domain containing protein [Synechococcus sp. PCC 7002]
Length = 318
Score = 45.4 bits (106), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 62/150 (41%), Gaps = 21/150 (14%)
Query: 255 GLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQN 314
GL L++ G L +I+ +A+DP NLG+A Q GD+ +A+ F + I N
Sbjct: 68 GLALIQQGNLDGAIAQFQQAIALDPLLWQAHYNLGLALGQRGDLPSAAQAFLETIALQPN 127
Query: 315 HPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIW 374
A YG++ G L + A+ L AL DP A
Sbjct: 128 FAVA-----------YGNL----------GGVLIDSQNWPQAETYLRRALSLDPNLAIAH 166
Query: 375 ANLANAYYLTGDHRSSGKCLEKAAKLEPNC 404
NL Y G+ ++ + +KA +L PN
Sbjct: 167 YNLGLIYRHQGNRDAAIQAWQKARELAPNF 196
>gi|432879797|ref|XP_004073552.1| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit-like
[Oryzias latipes]
Length = 1016
Score = 45.4 bits (106), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 84/408 (20%), Positives = 156/408 (38%), Gaps = 78/408 (19%)
Query: 151 RKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQC 210
++ P A A+ LG +Y+ GQ +A+ Y A + +P+ +
Sbjct: 73 KQNPMLAEAYSNLGNVYKERGQLQEAIEHYRHALRL---------KPDFIXXXXXXXXXD 123
Query: 211 LLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISV 270
L S +L K L LEE + +++++ AV W+ LG + G + +I
Sbjct: 124 LYCVRSDLGNLLKALG--RLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHH 181
Query: 271 LSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKY 330
+ +DPN D AY G++ + A+ F A+ Y L
Sbjct: 182 FEKAVTLDPNFLD-------AYINLGNVLKEARIFD----------RAVAGYLRAL---- 220
Query: 331 GSVLAGAGANTGEGACL-DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRS 389
S+ G AC+ + +++A + A++ P + NLANA G+
Sbjct: 221 -SLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGNVSE 279
Query: 390 SGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQ--------------EPTEQLSWAGNE 435
+ +C A +L P +A +++ + + +R Q E + + A +
Sbjct: 280 AEECYNTALRLCPT-----HADSLNNLANIKREQGNIEEAVQLYRKALEVFPEFAAAHSN 334
Query: 436 MASILREGDPVQIEPPIAWAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQ 495
+AS+L++ +Q A + + A A+ N L +M++ G
Sbjct: 335 LASVLQQQGKLQ----EALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQG--------- 381
Query: 496 ASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKV 543
A +C A++ +P A +NLA+ H+ SG E +
Sbjct: 382 ------ALQCYTRAIQINPAFADAHSNLASI------HKDSGNIPEAI 417
>gi|409990372|ref|ZP_11273755.1| hypothetical protein APPUASWS_05554 [Arthrospira platensis str.
Paraca]
gi|409938768|gb|EKN80049.1| hypothetical protein APPUASWS_05554 [Arthrospira platensis str.
Paraca]
Length = 833
Score = 45.4 bits (106), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 43/80 (53%)
Query: 230 LEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLG 289
E ++K ++S++ + VV LG +L + R +I + + PN+ C NLG
Sbjct: 18 FNEAINKYRQSLEENPENFVVHVHLGSLLNQLNRTDEAIMEYHRSIELKPNSAYCHYNLG 77
Query: 290 IAYFQSGDMEQSAKCFQDLI 309
+AY + G +E++ +CF+ I
Sbjct: 78 LAYVKHGSLEEAEQCFRQAI 97
>gi|23006671|ref|ZP_00048884.1| COG0457: FOG: TPR repeat [Magnetospirillum magnetotacticum MS-1]
Length = 259
Score = 45.4 bits (106), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 43/92 (46%)
Query: 234 LSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYF 293
++ L + + + A +NT G ++G+ +IS S + +DP + N +AY
Sbjct: 27 IASLSDVISRNPSDAGAYNTRGAAYARAGQFGEAISDFSKAIQLDPGSASAYNNRALAYR 86
Query: 294 QSGDMEQSAKCFQDLILKDQNHPAALINYAAL 325
Q+G + + + F I D N AA I A L
Sbjct: 87 QTGRNDAAMQDFSKAISSDPNFSAAYIGRANL 118
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 81/192 (42%), Gaps = 21/192 (10%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPN-NCDCIGN 287
+ E +S +++Q D A +N L ++GR +++ S ++ DPN + IG
Sbjct: 56 QFGEAISDFSKAIQLDPGSASAYNNRALAYRQTGRNDAAMQDFSKAISSDPNFSAAYIGR 115
Query: 288 LGIAYFQSGDME--------------QSAKCF--QDLILKDQNHPAALINYAALLLCKYG 331
+ Q GD++ +SA+ + + L+ + Q H A + A + +
Sbjct: 116 ANLERAQ-GDLDGALNDLNVAIRLAPESAEAYHARGLVRQKQGHNAEAVGDFAAAIDRNP 174
Query: 332 SVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSG 391
V A A G L + A E AAL + K A WA AY + +
Sbjct: 175 FVAAPYAA---RGQSLISMGQYDKAIEDFNAALNVNAKDASSWAYRGLAYEKANRRKEAS 231
Query: 392 KCLEKAAKLEPN 403
+ ++AA+L+PN
Sbjct: 232 ESYQQAARLDPN 243
>gi|157868868|ref|XP_001682986.1| conserved hypothetical protein [Leishmania major strain Friedlin]
gi|68223869|emb|CAJ04072.1| conserved hypothetical protein [Leishmania major strain Friedlin]
Length = 1148
Score = 45.4 bits (106), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 102/234 (43%), Gaps = 33/234 (14%)
Query: 170 LGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEE 229
LG+P AV Y+ ++L R E A P L +L AQ S G S P +
Sbjct: 881 LGRPSDAVRVYK---QVLCRGEPPTAPPYLGTLTSHWQAQLQEVRSFGMASKSGAASPAQ 937
Query: 230 --LEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 287
L++ +++ ESM + + N +LL+ GR + ++ V++ L V P++
Sbjct: 938 ALLDQRITE-AESMHYLSAYLHLCN----LLLREGRYRDALGVVTLALQVWPSSSVLWLG 992
Query: 288 LGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL 347
G+AY+++GD+ + +C Q+ + +PA +A Y ++LA N G +
Sbjct: 993 AGVAYYRAGDLLPAEECLQE---SNTLNPANPRTWA------YLALLAVRLHNVGVEEVV 1043
Query: 348 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDH-RSSGKCLEKAAKL 400
Q +N+ + A +WA L T R S CL +AA L
Sbjct: 1044 QQLLTLNL-------------EDAPLWAELGRTLLGTARFPRLSVLCLRRAAAL 1084
>gi|158339402|ref|YP_001520579.1| hypothetical protein AM1_6330 [Acaryochloris marina MBIC11017]
gi|158309643|gb|ABW31260.1| TPR domain protein [Acaryochloris marina MBIC11017]
Length = 1346
Score = 45.4 bits (106), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 71/175 (40%), Gaps = 21/175 (12%)
Query: 228 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 287
+ EE L+ L ++++ D A+ + G+ R + +I+ L +A+D G
Sbjct: 700 DRYEETLTALNQAIEIDPNMAIAYTNRGVTYSFLKRPKEAIADLKKAIALDSQYISAYGG 759
Query: 288 LGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL 347
LG+ Y G +++ F I D +P INY +G+G
Sbjct: 760 LGMLYHSQGRYQEALAQFNQGIAIDPKNP---INY------------------SGQGFVY 798
Query: 348 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 402
A A++ +P +A+ + + AN Y T ++ + L KA +L P
Sbjct: 799 FAQKQYQDAIAAHTKAIELEPDSANDYFSRANVYITTQQYQDAIADLTKAIRLAP 853
>gi|195025667|ref|XP_001986102.1| GH21177 [Drosophila grimshawi]
gi|193902102|gb|EDW00969.1| GH21177 [Drosophila grimshawi]
Length = 956
Score = 45.4 bits (106), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 68/176 (38%), Gaps = 39/176 (22%)
Query: 170 LGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEE 229
+G+ + YE+AE+ +R A+ L P++ S + P
Sbjct: 587 VGRTYNNLKRYEEAEQAYMR------------------AKALFPQAKAGVSYHARIAPNH 628
Query: 230 LEEIL----------SKLKE---------SMQSDTRQAVVWNTLGLILLKSGRLQSSISV 270
L + ++L+E SM+SD QA + G IL+K R + V
Sbjct: 629 LNVFINLANLISKNQTRLEEADHLYRQAISMRSDYVQAYI--NRGDILMKLNRTAQAQEV 686
Query: 271 LSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL 326
L D N D NLG+ + + G +Q+ F I H AL+N A LL
Sbjct: 687 YEQALLYDSENADIYYNLGVVFLEQGKSQQAHVYFNKAIELYPEHEQALLNSAILL 742
>gi|357131539|ref|XP_003567394.1| PREDICTED: probable UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase SEC-like [Brachypodium
distachyon]
Length = 980
Score = 45.1 bits (105), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 62/289 (21%), Positives = 114/289 (39%), Gaps = 31/289 (10%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRC-EADIARPELLSLVQIHHAQCLL 212
P +A+A + + ++ + G P KAV Y++A + +A + L V +H +
Sbjct: 223 PSSANAWYYIAGLFMQWGDPSKAVLYYKEAIKYKPSFYDAHLNLGNLYKAVGMHQDAIVC 282
Query: 213 PESSGDNSLDKEL----------EPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSG 262
+++ S D ++ E +L+ + ++++ ++ +N LG L +G
Sbjct: 283 YQNAVRASPDNDIAYGTLANTYYEQGQLDLAIRSYRQAINCNSSYVEAYNNLGNALKDAG 342
Query: 263 RLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINY 322
+ +I LA+ P++ + NLG Y + M+ +A + + A N
Sbjct: 343 KSDEAIGCYEKCLALQPSHPQALTNLGNVYMERNMMDVAASLYMATLTVTTGLSAPYNNL 402
Query: 323 AALL---------LCKYGSVL----AGAGANTGEGACLDQASAVNVAKECLLAALKADPK 369
A + L Y VL A G L + V+ A + A+ P
Sbjct: 403 AIIYKQQGEYDRALTCYNEVLRIDPTAADCLVNRGNTLKETGRVSEAIQDYFRAIAIRPA 462
Query: 370 AAHIWANLANAYYLTG-------DHRSSGKCLEKAAKLEPNCMSTRYAV 411
A ANLA+AY TG +R + +C + N + TR V
Sbjct: 463 MAEAHANLASAYKDTGLLEAAIVSYRHALQCRGDFPEATCNLLHTRQCV 511
>gi|322435449|ref|YP_004217661.1| hypothetical protein AciX9_1834 [Granulicella tundricola MP5ACTX9]
gi|321163176|gb|ADW68881.1| Tetratricopeptide TPR_1 repeat-containing protein [Granulicella
tundricola MP5ACTX9]
Length = 340
Score = 45.1 bits (105), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 67/156 (42%), Gaps = 23/156 (14%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 213
P+++ A +LLG + QR +P ++++ Y +A I +P L LV
Sbjct: 90 PRSSEALYLLGFVLQRENKPKESLAIYTRAAAI------SPPQPNDLKLV---------- 133
Query: 214 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 273
+LD L + + IL LK S+ D A W LG ++ G +
Sbjct: 134 ------ALDYVLLNDYPDAILW-LKRSLDGDPANAEAWYFLGRAKMQGGDFVEAEKAFRR 186
Query: 274 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLI 309
L + PN+ + NLG++ E +A+ ++D I
Sbjct: 187 ALTLAPNDSRALDNLGLSLAAQNRTEDAAQAYKDAI 222
>gi|149585238|ref|XP_001516104.1| PREDICTED: tetratricopeptide repeat protein 37, partial
[Ornithorhynchus anatinus]
Length = 640
Score = 45.1 bits (105), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 48/94 (51%), Gaps = 2/94 (2%)
Query: 214 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTL--GLILLKSGRLQSSISVL 271
E +G ++D +E E++E L+ L + + + V W L GL LK+G+ +++ L
Sbjct: 498 EEAGSAAVDLSVELEDVETALAILTKVTEKASAGTVKWAWLRRGLYYLKAGQHSQAVADL 557
Query: 272 SSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCF 305
+ L DP + +C +LG AY G + K F
Sbjct: 558 QAALRADPKDYNCWESLGEAYLSRGGYTTALKSF 591
>gi|406980754|gb|EKE02316.1| hypothetical protein ACD_20C00399G0001 [uncultured bacterium]
Length = 614
Score = 45.1 bits (105), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 85/186 (45%), Gaps = 23/186 (12%)
Query: 232 EILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIA 291
E +SKL +++ ++A L + L + G Q +I++L +L +DP D LG
Sbjct: 289 EAVSKLSKAISLQEKKAATLYYLAISLAEIGEHQRAITLLEEVLTIDPRYSDAFVKLGSI 348
Query: 292 YFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQAS 351
Y D ++ +C+++ + + A NY L+ Y S+ G D A+
Sbjct: 349 YNILKDHHKAIECYKNAVNTSIKNSHA--NY--LIAVTYNSL--G-----------DYAN 391
Query: 352 AVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNC--MSTRY 409
A+ + ++ +P+ + NLA TGD + + + + A + EPN ++T Y
Sbjct: 392 AIKYYNKT----IETNPENIDAYVNLAVILSETGDIKEAVRNMRIAFRKEPNSCKINTIY 447
Query: 410 AVAVSR 415
V +S+
Sbjct: 448 GVILSK 453
>gi|195427028|ref|XP_002061581.1| GK20634 [Drosophila willistoni]
gi|194157666|gb|EDW72567.1| GK20634 [Drosophila willistoni]
Length = 935
Score = 45.1 bits (105), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 68/176 (38%), Gaps = 39/176 (22%)
Query: 170 LGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEE 229
+G+ L + Y +AEE +R A+ L P++ S + P
Sbjct: 563 VGRTLNNLKRYNEAEEAYVR------------------AKALFPQAKPGVSYHARIAPNH 604
Query: 230 LEEIL----------SKLKE---------SMQSDTRQAVVWNTLGLILLKSGRLQSSISV 270
L + ++L+E SM+SD QA + G IL+K R + V
Sbjct: 605 LNVFINLANLIAKNQTRLEEADHLYRQAISMRSDYVQAYI--NRGDILMKLNRTAQAQEV 662
Query: 271 LSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL 326
L D N D NLG+ + + G +Q+ F I H AL+N A LL
Sbjct: 663 YEQALLYDSENADIYYNLGVVFLEQGKSQQAQVYFNKAIELYPEHEQALLNSAILL 718
>gi|156401113|ref|XP_001639136.1| predicted protein [Nematostella vectensis]
gi|156226262|gb|EDO47073.1| predicted protein [Nematostella vectensis]
Length = 993
Score = 45.1 bits (105), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 71/330 (21%), Positives = 131/330 (39%), Gaps = 67/330 (20%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
LEE + +++++ AV W+ LG + G + +I + +DPN D
Sbjct: 168 RLEEAKACYLKAIETQPSFAVAWSNLGCVFNAQGEIWLAIHHFEKAVQLDPNFLD----- 222
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL- 347
AY G++ + A+ F + AA + AL L +V+ G AC+
Sbjct: 223 --AYINLGNVLKEARIFDRAV-------AAYLR--ALNLSPNHAVV------HGNLACVY 265
Query: 348 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 407
+ +++A + A++ P + NLANA G + +C A +L P
Sbjct: 266 YEQGLIDLAVDTYRRAIELQPNFPDAYCNLANALKEQGKVSEAEECYNTALQLSPT---- 321
Query: 408 RYAVAVSRIKDAERSQEPTE--------------QLSWAGNEMASILREGDPVQIEPPIA 453
+A +++ + + +R Q E + + A + +AS+L++ +Q A
Sbjct: 322 -HADSLNNLANIKREQGKIEESIRLYCKALEIFPEFAAAHSNLASVLQQQGKLQ----EA 376
Query: 454 WAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKAD 513
+ + H A AF N L +M++ G A +C A++ +
Sbjct: 377 LLHYKEAIRIHPTFADAFSNMGNLLKEMQDIQG---------------AIQCYSRAIQIN 421
Query: 514 PKAAHIWANLANAYYLTGDHRSSGKCLEKV 543
P A +NLA+ H+ SG E +
Sbjct: 422 PAFADAHSNLASV------HKDSGNIPEAI 445
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 85/379 (22%), Positives = 144/379 (37%), Gaps = 68/379 (17%)
Query: 179 SYEKAEEI---LLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILS 235
+Y++AE+I L R E D +L L+ H QC LD+ L
Sbjct: 32 NYDRAEQICMQLWRREPD--NTGVLLLLSSIHFQC--------RRLDRSAHFSTL----- 76
Query: 236 KLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQS 295
+++ + A ++ LG + + G+L+ +++ + + P+ D NL A +
Sbjct: 77 ----AIKQNPMLAEAYSNLGNVFKERGQLKDALANYRHAVKLKPDFIDGYINLAAALVAA 132
Query: 296 GDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNV 355
GD+E + + A + Y L C + G L +
Sbjct: 133 GDLEGAVHAY-----------ATALQYNPDLYC----------VRSDLGNLLKALGRLEE 171
Query: 356 AKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSR 415
AK C L A++ P A W+NL + G+ + EKA +L+PN + Y +
Sbjct: 172 AKACYLKAIETQPSFAVAWSNLGCVFNAQGEIWLAIHHFEKAVQLDPNFLDA-YINLGNV 230
Query: 416 IKDAERSQEPTEQLSWAGNEMASILREGDPVQIEP--PIAWAGFAAVQKTHHEVAAAFET 473
+K+A +A+ LR + + P + A V + A +T
Sbjct: 231 LKEARIFDR----------AVAAYLRA---LNLSPNHAVVHGNLACVYYEQGLIDLAVDT 277
Query: 474 EEN--ELSKMEECAGAGESAFLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTG 531
EL A + L + V+ A+EC AL+ P A NLAN
Sbjct: 278 YRRAIELQPNFPDAYCNLANALKEQGKVSEAEECYNTALQLSPTHADSLNNLANI----- 332
Query: 532 DHRSSGKCLEKVLMVYCSS 550
R GK +E+ + +YC +
Sbjct: 333 -KREQGK-IEESIRLYCKA 349
>gi|326503118|dbj|BAJ99184.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 300
Score = 45.1 bits (105), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 63/155 (40%), Gaps = 25/155 (16%)
Query: 234 LSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYF 293
++K +E++ D + A + + + G + +I + + + PN CD NL AY
Sbjct: 116 IAKNEEALAIDPQFAECYGNMANAWKEKGDIDLAIRYYLTAIQLRPNFCDAWSNLASAYT 175
Query: 294 QSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAG--AGANTGEGACLDQAS 351
+ G + ++A+C CK VL A++ G +
Sbjct: 176 RKGRLNEAAQC-----------------------CKQALVLNPRLVDAHSNLGNLMKAQG 212
Query: 352 AVNVAKECLLAALKADPKAAHIWANLANAYYLTGD 386
V A C L A++ DP A W+NLA + GD
Sbjct: 213 LVQEAYTCYLEAIRIDPHFAIAWSNLAGLFMEVGD 247
>gi|40063047|gb|AAR37903.1| TPR domain/sulfotransferase domain protein [uncultured marine
bacterium 560]
Length = 723
Score = 45.1 bits (105), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 44/214 (20%), Positives = 90/214 (42%), Gaps = 18/214 (8%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
++ E + +K + + +++N G+ G+L ++ LA+ P+ + NL
Sbjct: 26 KINEAIDAIKVLTKDFPNEPLLYNISGVCYKTIGQLDVAVKSFEKALAIKPDYTEVNYNL 85
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL---------LCKYGSVLA---- 335
G+ + + G ++ + KC++D++ + H A N L + Y +A
Sbjct: 86 GLTFQELGQLDAAVKCYEDVLAVNPEHAEAHNNLGVTLKELEQLDAAVKSYEKAIAIKPD 145
Query: 336 GAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLE 395
A A+ G L + ++VA + A+ P A NL NA G + K E
Sbjct: 146 YAEAHNNLGNALKELGQLDVAVKSYEKAIAIKPDFAETHNNLGNALQGLGQLDEAVKSYE 205
Query: 396 KAAKLEPNCMSTRYAVA-----VSRIKDAERSQE 424
+A ++ + + Y + + ++ DA +S E
Sbjct: 206 QAIAIQSDFSNAYYNLGNVLRELGQLDDAVKSYE 239
Score = 39.3 bits (90), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 66/293 (22%), Positives = 115/293 (39%), Gaps = 51/293 (17%)
Query: 125 QSGLGTSSSSREEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAE 184
+ LG + E+ +++K+ +A K P A AH LG + LGQ AV SYEKA
Sbjct: 116 HNNLGVTLKELEQLDAAVKSYEKAIAIK-PDYAEAHNNLGNALKELGQLDVAVKSYEKAI 174
Query: 185 EILLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEP-EELEEILSKLKESM-- 241
I +P+ + N+L L+ +L+E + ++++
Sbjct: 175 AI---------KPDF---------------AETHNNLGNALQGLGQLDEAVKSYEQAIAI 210
Query: 242 QSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQS 301
QSD A + LG +L + G+L ++ +A+ P+ + NLG A G ++++
Sbjct: 211 QSDFSNA--YYNLGNVLRELGQLDDAVKSYEKAIAIKPDYDEAHNNLGNALQGLGQLDEA 268
Query: 302 AKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLL 361
K ++ I + A N G L + V+ A
Sbjct: 269 VKSYEQAIAIQSDFSNAYYNL---------------------GNVLRELGQVDTAVRSYK 307
Query: 362 AALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVS 414
A+ P A NL A G ++ K LEKA + P+ + + ++
Sbjct: 308 KAIVIKPDYAKAHNNLGIALQDLGQMDTAVKNLEKAIAITPDFAEAHHNLGIA 360
>gi|83589994|ref|YP_430003.1| hypothetical protein Moth_1146 [Moorella thermoacetica ATCC 39073]
gi|83572908|gb|ABC19460.1| conserved hypothetical protein [Moorella thermoacetica ATCC 39073]
Length = 299
Score = 45.1 bits (105), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 61/165 (36%), Gaps = 21/165 (12%)
Query: 238 KESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGD 297
KE +++ R WN LG L+ G L++++ + L + P N D + N G Y +
Sbjct: 50 KEILRTRKRIPGWWNNLGYCYLRLGELETALDCYRTALKLAPRNIDILINTGGCYQRLEQ 109
Query: 298 MEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAK 357
++ +CF K Q L+N G CL Q A
Sbjct: 110 WAEAYRCFYR-AWKYQPRDVDLLN--------------------NLGVCLVQLERPEEAL 148
Query: 358 ECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 402
+ AL P I NLA A + C EKA +L P
Sbjct: 149 DYYRQALALAPAEGEIIGNLAAALARCRRWPEAVTCFEKALRLLP 193
Score = 39.7 bits (91), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 72/187 (38%), Gaps = 15/187 (8%)
Query: 228 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 287
E+ E + + R + N LG+ L++ R + ++ LA+ P + IGN
Sbjct: 108 EQWAEAYRCFYRAWKYQPRDVDLLNNLGVCLVQLERPEEALDYYRQALALAPAEGEIIGN 167
Query: 288 LGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGA-------GAN 340
L A + ++ CF+ L+ ++IN AA L G A
Sbjct: 168 LAAALARCRRWPEAVTCFEK-ALRLLPEDVSIINNAAACLEALGKCYLAAPLYARALALK 226
Query: 341 TGE-------GACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKC 393
GE ACL + + A++ + L+ P+ W L Y TGD ++ C
Sbjct: 227 PGEPQIRQNYAACLMKLGDLATARKIVEGLLRLYPEHRPAWQLLGTIYEATGDTGAAAGC 286
Query: 394 LEKAAKL 400
+A L
Sbjct: 287 YNRAWGL 293
>gi|33864076|ref|NP_895636.1| hypothetical protein PMT1809 [Prochlorococcus marinus str. MIT
9313]
gi|33635660|emb|CAE21984.1| TPR repeat [Prochlorococcus marinus str. MIT 9313]
Length = 549
Score = 45.1 bits (105), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 37/185 (20%), Positives = 68/185 (36%), Gaps = 21/185 (11%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
EL++ + ++ + D N G I + R I LS +++ P+N D I NL
Sbjct: 15 ELDKAEAIYQQVLAVDVNNFYALNFCGSIKREKKRFDEGIDFLSRAISLQPDNPDAIYNL 74
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLD 348
G + S +++ C++ + P AL N G CL
Sbjct: 75 GNVFKDSERWDEAISCYEKTLGLRAESPEALNNL---------------------GICLK 113
Query: 349 QASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTR 408
+ ++ L + P A W NL N + + + A L+P+ +
Sbjct: 114 EVERFEYSEIVLRRVVSMQPGLAGAWLNLGNTFKEQEKYSEAKASYRNAIDLKPDFEAAY 173
Query: 409 YAVAV 413
+A+ +
Sbjct: 174 FALGL 178
>gi|425445062|ref|ZP_18825101.1| putative glycosyl transferase [Microcystis aeruginosa PCC 9443]
gi|389735016|emb|CCI01403.1| putative glycosyl transferase [Microcystis aeruginosa PCC 9443]
Length = 403
Score = 45.1 bits (105), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 2/90 (2%)
Query: 226 EPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCI 285
E E E LS +++++ D A + LGL+ + RL SI L ++P+N
Sbjct: 289 EAENYEAALSVFEKTVEIDPSYADGYYNLGLVFKQLHRLPESIKAYKKALKLNPDNPTIY 348
Query: 286 GNLGIAYFQSGDMEQSAKCFQD--LILKDQ 313
NLG+AY G ++ + +Q +LKDQ
Sbjct: 349 QNLGVAYIVFGSYNEAIEIWQKGLQLLKDQ 378
>gi|403359316|gb|EJY79316.1| TPR repeat-containing protein [Oxytricha trifallax]
Length = 1076
Score = 45.1 bits (105), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 81/178 (45%), Gaps = 29/178 (16%)
Query: 146 LVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSY---EKAEEILLRCEADIARPELLSL 202
+ +A KNA A F L ++Y+ G LKA +Y +KA++ + + ++A
Sbjct: 126 FLKIAINEEKNATALFNLAVIYEEKGDKLKAKEAYAECQKADQSHYKSKVNLA------- 178
Query: 203 VQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSG 262
+L LDKE + E + +E+++ + + A + + +G+ L ++G
Sbjct: 179 --------IL--------LDKEGKGHEANQFY---QEALKQNPKDAKIHHNMGINLKRAG 219
Query: 263 RLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALI 320
+L ++S + +DP+N + N GI Y D + + I K++ + A +
Sbjct: 220 KLDEALSHYKKAMELDPDNSTVLYNTGILYNIKSDYHNAVDVLEKSISKNKENVYAFL 277
Score = 38.9 bits (89), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 21/97 (21%), Positives = 42/97 (43%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
E E+ + K +++ D A + LG +IS L ++P++ +C N+
Sbjct: 938 EFEKAIVNYKRTIELDPYNAPAFYNLGNAYYMINEFDKAISSYGQALKLNPDSAECHFNI 997
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAAL 325
AY GD + + K ++D + D + +N +
Sbjct: 998 ASAYNDKGDFDNAIKHYKDSLQYDAKNSETFVNLGTI 1034
Score = 38.9 bits (89), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 41/206 (19%), Positives = 85/206 (41%), Gaps = 23/206 (11%)
Query: 225 LEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDC 284
LE ELE+ LK+ +Q + + + ++G +L ++G +++ L +P
Sbjct: 798 LEKGELEKAAEYLKKCLQLNPKYVLGLVSMGNLLFETGHSKTAAKYHQQALKYNPREIQA 857
Query: 285 IGNLGIAYFQSGDMEQSAKCFQDLILKDQN---------HPAALINYAALLLCKYGSVL- 334
+ LG A + G+ +++ + ++ + D+ + LI L + Y +
Sbjct: 858 LIGLGNALYDMGEPKEAIEYYKKALELDKGLSDVHYNLGNALYLIENTDLAIQHYKIAID 917
Query: 335 -----AGAGANTGEGACLD---QASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGD 386
+ N G C+ + + VN + ++ DP A + NL NAYY+ +
Sbjct: 918 LNPNKPESYYNLGNALCIKAEFEKAIVNYKR-----TIELDPYNAPAFYNLGNAYYMINE 972
Query: 387 HRSSGKCLEKAAKLEPNCMSTRYAVA 412
+ +A KL P+ + +A
Sbjct: 973 FDKAISSYGQALKLNPDSAECHFNIA 998
>gi|346972436|gb|EGY15888.1| glucose repression mediator protein CYC8 [Verticillium dahliae
VdLs.17]
Length = 892
Score = 45.1 bits (105), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 23/106 (21%), Positives = 55/106 (51%), Gaps = 1/106 (0%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
+L+E + + +++++ + + N + LIL ++ L ++L +D +N + G+L
Sbjct: 51 DLDEAILAYEAALRANPQSILAMNAISLILRTREHFAKAVEYLQAVLKIDAHNGEAWGSL 110
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYA-ALLLCKYGSV 333
G Y D++Q+ +Q+ ++ +N + Y +L +YGS+
Sbjct: 111 GHCYLMMDDLQQAYSAYQNALVNLRNPKEPRLWYGIGILYDRYGSL 156
>gi|329895776|ref|ZP_08271152.1| TPR repeat-containing protein [gamma proteobacterium IMCC3088]
gi|328922138|gb|EGG29495.1| TPR repeat-containing protein [gamma proteobacterium IMCC3088]
Length = 807
Score = 45.1 bits (105), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 62/152 (40%), Gaps = 21/152 (13%)
Query: 251 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 310
W LG+++ KSGRL S+ + + + P + D NL + D L
Sbjct: 149 WKLLGVLVQKSGRLSESLDIHRKAIDLAPEDADVYYNLAV---NLAD------------L 193
Query: 311 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 370
K + ++ +A L ++ L T G L+Q V A+ C + A++ P
Sbjct: 194 KRLDDAVSMFKHALSLKPEFSQAL------TNLGVVLEQLGEVEDAEICFIKAIRISPNE 247
Query: 371 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 402
A I+ NL A + G +S A LEP
Sbjct: 248 AKIYNNLGIAQHSLGKLLASESNYRIALTLEP 279
Score = 43.1 bits (100), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 87/228 (38%), Gaps = 21/228 (9%)
Query: 198 ELLSLVQIHHAQCLLPESSGDNSLDKEL------EPEELEEILSKLKESMQSDTRQAVVW 251
EL + Q H L+ + +N +L + L E L ++++ A V+
Sbjct: 124 ELGNYAQAEHQALLMTQKFPENPFSWKLLGVLVQKSGRLSESLDIHRKAIDLAPEDADVY 183
Query: 252 NTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILK 311
L + L RL ++S+ L++ P + NLG+ Q G++E + CF I
Sbjct: 184 YNLAVNLADLKRLDDAVSMFKHALSLKPEFSQALTNLGVVLEQLGEVEDAEICFIKAIRI 243
Query: 312 DQNHPAALINYAALLLCKYGSVLAG--------------AGANTGEGACLDQASAVNVAK 357
N A + N + G +LA A ANT G L + + A
Sbjct: 244 SPNE-AKIYNNLGIAQHSLGKLLASESNYRIALTLEPQFAEANTNLGNVLRRLGKLTEAA 302
Query: 358 ECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 405
E A+K P+ A NLA G+ + A KL P+ +
Sbjct: 303 ESHCTAIKIAPELAEAHYNLATTLEDLGELEGAIAAYRDALKLRPSYL 350
>gi|308175219|ref|YP_003921924.1| hypothetical protein BAMF_3328 [Bacillus amyloliquefaciens DSM 7]
gi|384161103|ref|YP_005543176.1| hypothetical protein BAMTA208_17655 [Bacillus amyloliquefaciens
TA208]
gi|384165997|ref|YP_005547376.1| hypothetical protein LL3_03621 [Bacillus amyloliquefaciens LL3]
gi|384170192|ref|YP_005551570.1| hypothetical protein BAXH7_03610 [Bacillus amyloliquefaciens XH7]
gi|307608083|emb|CBI44454.1| conserved hypothetical protein [Bacillus amyloliquefaciens DSM 7]
gi|328555191|gb|AEB25683.1| hypothetical protein BAMTA208_17655 [Bacillus amyloliquefaciens
TA208]
gi|328913552|gb|AEB65148.1| hypothetical protein LL3_03621 [Bacillus amyloliquefaciens LL3]
gi|341829471|gb|AEK90722.1| hypothetical protein BAXH7_03610 [Bacillus amyloliquefaciens XH7]
Length = 484
Score = 45.1 bits (105), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Query: 258 LLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPA 317
LL+SG+L ++ +L + A P NL +AYF SG++ ++ + +++ K++ +
Sbjct: 163 LLESGQLHEAVVMLEEITADYPELWSAYNNLALAYFYSGNVTKAKQTVFEVLEKNEGNLH 222
Query: 318 ALINYAALLLCKY 330
AL NY L+ C Y
Sbjct: 223 ALCNY--LVFCYY 233
>gi|55670588|pdb|1W3B|A Chain A, The Superhelical Tpr Domain Of O-Linked Glcnac Transferase
Reveals Structural Similarities To Importin Alpha.
gi|55670589|pdb|1W3B|B Chain B, The Superhelical Tpr Domain Of O-Linked Glcnac Transferase
Reveals Structural Similarities To Importin Alpha
Length = 388
Score = 45.1 bits (105), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 63/158 (39%), Gaps = 21/158 (13%)
Query: 248 AVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQD 307
A ++ LG + + G+LQ +I L + P+ D NL A +GDME + + +
Sbjct: 67 AEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAY-- 124
Query: 308 LILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKAD 367
+ + Y L C + G L + AK C L A++
Sbjct: 125 ---------VSALQYNPDLYC----------VRSDLGNLLKALGRLEEAKACYLKAIETQ 165
Query: 368 PKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 405
P A W+NL + G+ + EKA L+PN +
Sbjct: 166 PNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL 203
>gi|26338035|dbj|BAC32703.1| unnamed protein product [Mus musculus]
Length = 604
Score = 45.1 bits (105), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 73/336 (21%), Positives = 134/336 (39%), Gaps = 50/336 (14%)
Query: 228 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 287
E+ EE + LKES++ A +++L +L + R + + + + + P++ D N
Sbjct: 284 EKTEEAIMLLKESIKYGPDFADAYSSLASLLAEQERFKEAEDIYQAGIKNCPDSSDLHNN 343
Query: 288 LGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL 347
+ SG E++ +Q I +H A++N G + G N+
Sbjct: 344 YAVFLVDSGFPEKAVAHYQQAIQLSPSHHVAVVNL--------GRLYRSLGENSK----- 390
Query: 348 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 407
A+E ALK + A + + L YY TG H+ + + +A L+P+
Sbjct: 391 --------AEEWYRRALKV-ARTAEVLSPLGALYYNTGRHKEALEVYREAVSLQPSQREL 441
Query: 408 RYAVA-----VSRIKDAERSQEPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFAAVQK 462
R A+A + + K+AE+ + S + +P +E + +A+
Sbjct: 442 RLALAQVLAVMGQTKEAEK--------------ITSHIVSEEPRCLE---CYRLLSAIHS 484
Query: 463 THHEVAAAFETEENELS-KMEECAGAGESAF-----LDQASAVNVAKECLLAALKADPKA 516
A E E L K ++ E F L + + ++ A E AA+ DP
Sbjct: 485 KQEHHGKALEAIEKALQLKPKDPKVISELFFTKGNQLREQNLLDKAFESYEAAVTLDPDQ 544
Query: 517 AHIWANLANAYYLTGDHRSSGKCLEKVLMVYCSSNL 552
A W N+ ++ G + S+ E+ L + S L
Sbjct: 545 AQAWMNMGGIRHIQGSYVSARAYYERALKLVPDSKL 580
>gi|436842873|ref|YP_007327251.1| TPR repeat-containing protein [Desulfovibrio hydrothermalis AM13 =
DSM 14728]
gi|432171779|emb|CCO25152.1| TPR repeat-containing protein [Desulfovibrio hydrothermalis AM13 =
DSM 14728]
Length = 206
Score = 45.1 bits (105), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 37/75 (49%)
Query: 225 LEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDC 284
L+ E+LE + ++ Q AV W +G + ++ G + +I L + DPN
Sbjct: 70 LQREDLEGCMRYNIQATQQRPFFAVPWGNIGYVYMQQGDIDKAIKALKRAIKYDPNFVQA 129
Query: 285 IGNLGIAYFQSGDME 299
+ LG AYF G+++
Sbjct: 130 LSTLGSAYFNEGEVD 144
Score = 38.9 bits (89), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 56/138 (40%), Gaps = 28/138 (20%)
Query: 286 GNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGA 345
GN+G Y Q GD++++ K + I D N AL S L A N GE
Sbjct: 97 GNIGYVYMQQGDIDKAIKALKRAIKYDPNFVQAL------------STLGSAYFNEGE-- 142
Query: 346 CLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 405
V+ E A+K W NLA Y ++ + +C++KA K
Sbjct: 143 -------VDDCIEVCEKAVKLSENFGPAWNNLALCYSEKKEYDKAVECIDKAIK------ 189
Query: 406 STRYAVAVSRIKDAERSQ 423
T + VA +K+ E+ +
Sbjct: 190 -TGFEVAPDFLKELEQYR 206
>gi|428169180|gb|EKX38116.1| hypothetical protein GUITHDRAFT_115669 [Guillardia theta CCMP2712]
Length = 842
Score = 45.1 bits (105), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 109/257 (42%), Gaps = 41/257 (15%)
Query: 253 TLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQS-AKC------- 304
+ G +L R+ +I++ SS + +DP+ D NLG A QSG + + AKC
Sbjct: 234 SYGNLLFDERRMDEAIAMFSSAIRIDPSLEDARNNLGNALRQSGWLREVLAKCLKLACNS 293
Query: 305 -----FQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKEC 359
FQDL + D+ A Y S+L G+ + +G + A+ KE
Sbjct: 294 VQQTVFQDLGMLDETRRVADAAYKINPRIVEASILRGS-VDYAKGFMRE---AIERYKE- 348
Query: 360 LLAALKADPKAAHIWANLANAY---YLTGDHRSSGKCLE---KAAKLEPNCMSTRYAVAV 413
ALK DP + NL N Y Y + R + + E + +L+ +C+ + V
Sbjct: 349 ---ALKLDPTSQQTLLNLGNTYGDLYRQLEARVTNQNSEARKEMRELQNSCIQVYKKMLV 405
Query: 414 SRIKDAE-------RSQEPTEQLSWAGN-----EMASI-LREGDPVQIEPPIAWAGFAAV 460
DA+ + E +W N EMA + +++G P ++P +A A F
Sbjct: 406 LDPIDAQAFLNMVWAQKYACEWANWEENLRRIEEMARMQIKQGKPPSLKPFLALA-FPIS 464
Query: 461 QKTHHEVAAAFETEENE 477
+ ++A A EE +
Sbjct: 465 PTLYLDIARAHAQEEQK 481
>gi|443477489|ref|ZP_21067333.1| Tetratricopeptide TPR_2 repeat-containing protein [Pseudanabaena
biceps PCC 7429]
gi|443017386|gb|ELS31839.1| Tetratricopeptide TPR_2 repeat-containing protein [Pseudanabaena
biceps PCC 7429]
Length = 528
Score = 45.1 bits (105), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 41/193 (21%), Positives = 77/193 (39%), Gaps = 18/193 (9%)
Query: 226 EPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCI 285
E +L+ L+ ++++ + + LG+ L + G +Q +I+ + +D +
Sbjct: 75 EQNQLDRALTLYRQAIAASPELVPAYYGLGVALRQKGDIQGAINAHRQAITIDKSYTPAY 134
Query: 286 GNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGA 345
LGIA +Q GD + +Q I L K + LA A N G
Sbjct: 135 YGLGIALYQKGDSSGAIDAYQQFI----------------QLSKADTNLAPAYYNL--GL 176
Query: 346 CLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 405
++ + ++ A A++ DPK A L G+ + + KA +L P
Sbjct: 177 AYERRNNIDEAVASFRKAIEFDPKYALAHNGLGTVLRRQGNRKEAIAAYRKAIELAPQYA 236
Query: 406 STRYAVAVSRIKD 418
+A+ +S +D
Sbjct: 237 VAHFALGISLYED 249
Score = 42.0 bits (97), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 81/186 (43%), Gaps = 15/186 (8%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPEL-LSL---------V 203
PK A AH LG + +R G +A+++Y KA E L + +A L +SL +
Sbjct: 199 PKYALAHNGLGTVLRRQGNRKEAIAAYRKAIE--LAPQYAVAHFALGISLYEDRDYTGAI 256
Query: 204 QIHHAQCLLPESSGDNSLDKELEPEELEE---ILSKLKESMQSDTRQAVVWNTLGLILLK 260
+ + L + + + L +L + ++ +++++ D R A ++ LG + L+
Sbjct: 257 EAYKRVTTLEPNFPNVYYNLGLAYNQLSDRPNAIATFRKAIEQDPRNADIYAILGSVFLR 316
Query: 261 SGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALI 320
+ + ++P LG+A + GD+E + +Q I + N+ A
Sbjct: 317 DENIPEAAEAFKRSTEINPKVASSFNGLGLALRRQGDLEGAIAAYQKSITINPNYAVAYN 376
Query: 321 NYAALL 326
N +L
Sbjct: 377 NLGRVL 382
Score = 38.9 bits (89), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 30/178 (16%), Positives = 73/178 (41%), Gaps = 21/178 (11%)
Query: 230 LEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLG 289
++E ++ +++++ D + A+ N LG +L + G + +I+ + + P LG
Sbjct: 184 IDEAVASFRKAIEFDPKYALAHNGLGTVLRRQGNRKEAIAAYRKAIELAPQYAVAHFALG 243
Query: 290 IAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQ 349
I+ ++ D + + ++ + + N P N G +Q
Sbjct: 244 ISLYEDRDYTGAIEAYKRVTTLEPNFPNVYYNL---------------------GLAYNQ 282
Query: 350 ASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 407
S A A++ DP+ A I+A L + + + + + +++ ++ P S+
Sbjct: 283 LSDRPNAIATFRKAIEQDPRNADIYAILGSVFLRDENIPEAAEAFKRSTEINPKVASS 340
>gi|440681617|ref|YP_007156412.1| Tetratricopeptide TPR_2 repeat-containing protein [Anabaena
cylindrica PCC 7122]
gi|428678736|gb|AFZ57502.1| Tetratricopeptide TPR_2 repeat-containing protein [Anabaena
cylindrica PCC 7122]
Length = 365
Score = 45.1 bits (105), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 84/207 (40%), Gaps = 13/207 (6%)
Query: 230 LEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLG 289
+++ ++ ++++QSD+ A LGL L ++G+LQ + DP NLG
Sbjct: 120 MQDAITAFRQAIQSDSTLAPAHYNLGLALRQAGQLQPAADAFYQATQADPQFAPAFANLG 179
Query: 290 IAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAAL--LLCKYGSVLAG------AGANT 341
A + +++ +A Q + D A N + L + S +A N+
Sbjct: 180 GALLEGNNLQLAADYLQRSLQIDPQLGFAHYNLGLVKELQKDWESAIASFKKAMTYSQNS 239
Query: 342 GE-----GACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEK 396
E G Q V +AKE A+ +P+ A NL + ++ G + K
Sbjct: 240 PEPAYHLGMSYLQQGKVQLAKEAFSKAIAINPRYAEAHYNLGSIWFNQGKFNEALAAFRK 299
Query: 397 AAKLEPNCMSTRYAVAVSRIKDAERSQ 423
+A++ N Y + I+ + S+
Sbjct: 300 SAEVNANYADAYYGAGLVFIQLKQYSE 326
Score = 39.7 bits (91), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 73/185 (39%), Gaps = 22/185 (11%)
Query: 237 LKESMQSDTRQAVV-WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQS 295
++ + TRQA + W GL ++ G +Q +I+ + D NLG+A Q+
Sbjct: 92 VRSFLAQTTRQAALDWLNQGLQAIQGGNMQDAITAFRQAIQSDSTLAPAHYNLGLALRQA 151
Query: 296 GDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNV 355
G ++ +A F D A A AN G GA L+ + + +
Sbjct: 152 GQLQPAADAFYQATQADPQ-------------------FAPAFANLG-GALLE-GNNLQL 190
Query: 356 AKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSR 415
A + L +L+ DP+ NL L D S+ +KA N Y + +S
Sbjct: 191 AADYLQRSLQIDPQLGFAHYNLGLVKELQKDWESAIASFKKAMTYSQNSPEPAYHLGMSY 250
Query: 416 IKDAE 420
++ +
Sbjct: 251 LQQGK 255
>gi|374578333|ref|ZP_09651429.1| tetratricopeptide repeat protein,tetratricopeptide repeat protein
[Bradyrhizobium sp. WSM471]
gi|374426654|gb|EHR06187.1| tetratricopeptide repeat protein,tetratricopeptide repeat protein
[Bradyrhizobium sp. WSM471]
Length = 461
Score = 45.1 bits (105), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 92/227 (40%), Gaps = 27/227 (11%)
Query: 211 LLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISV 270
LL E+ GD L + L ++++ D + + + G++ RL +++
Sbjct: 115 LLREAGGD-----------LNRAAADLSKAIELDPQNSESYELRGVVYTNQRRLDRALAD 163
Query: 271 LSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKY 330
+ + P+N + G+ Y+ GD E++ + + + D N P + N A K
Sbjct: 164 YDQAIKLKPDNAQAWSDRGVTYYLGGDNEKAIRDLSEALRLDPNGPRSYTNRGA-AYKKL 222
Query: 331 GSVLAGAGANTGEGACLDQASAVNVAKECL-LAALKADPKA-------------AHIWAN 376
G LA A + GE LD L LAA+ KA + + N
Sbjct: 223 GQ-LAKAVFDDGEAIRLDPKVPEYYDNRGLSLAAMGEYDKAIADYDQALRLAPRPNFFTN 281
Query: 377 LANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQ 423
++Y+L G+ ++ E A KL+PN T AV K ER +
Sbjct: 282 RGDSYHLKGELGAALSDYEAALKLDPNFAQTYNNRAVLYKKMGERKK 328
>gi|379335302|gb|AFD03286.1| TPR repeat-containing protein [uncultured archaeon W4-93a]
Length = 272
Score = 45.1 bits (105), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 67/159 (42%), Gaps = 21/159 (13%)
Query: 255 GLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQN 314
+ ++K+ + + +IS+ + L DP N + + N G+A Q + CF D IL+
Sbjct: 17 AMAMVKANQPKIAISLFNKALKQDPKNVEALHNKGLALNQMKKYSDAITCF-DKILEISP 75
Query: 315 HPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIW 374
+ A N A+ + G+ + A E A+KADPK A
Sbjct: 76 NDAPAFNNKAIAQAELGNTVD--------------------AFENYDRAIKADPKYAAAH 115
Query: 375 ANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAV 413
N + H + KCLE+A KL+P ++ + V
Sbjct: 116 FNKGVLFDRLSSHEDAIKCLEEAIKLDPKKLNALFYKGV 154
>gi|434406141|ref|YP_007149026.1| tetratricopeptide repeat protein [Cylindrospermum stagnale PCC
7417]
gi|428260396|gb|AFZ26346.1| tetratricopeptide repeat protein [Cylindrospermum stagnale PCC
7417]
Length = 792
Score = 45.1 bits (105), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 103/296 (34%), Gaps = 61/296 (20%)
Query: 241 MQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQ 300
+Q D QA WN G L GR + I+ L + P++ D N GIA + G E
Sbjct: 355 IQPDKHQA--WNNRGNALGNLGRYEDEIASYDQALKIQPDDPDAWNNRGIALGKLGRYED 412
Query: 301 SAKCFQDLILKDQ-NHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKEC 359
+ C+ D LK Q + P A N G L G N A D
Sbjct: 413 AIACY-DAALKIQPDDPGAWNN--------RGIALGKLGRNEDAIASYD----------- 452
Query: 360 LLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVA-----VS 414
AALK P W N A G + + + A K++P+ Y +
Sbjct: 453 --AALKIQPDLHQAWYNRGIALRKLGRNEDAIASYDAALKIQPDDSDAWYNRGNDLGKLG 510
Query: 415 RIKDAERSQ------EPTEQLSWA--GNEMASILREGDPVQIEPPIAWAGFAAVQKTHHE 466
R +DA S +P +W GN + ++ R+ D + A + A K +
Sbjct: 511 RNEDAIASYDAALKIQPDLHQAWYNRGNALGNLGRDEDAI--------ASYDAALKFQPD 562
Query: 467 VAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKADPKAAHIWAN 522
+ A+ N L + G E A AALK P W N
Sbjct: 563 LHEAWYNRGNALGNL----GRNEDAI-----------ASYDAALKFQPDYHQAWYN 603
Score = 39.7 bits (91), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 70/180 (38%), Gaps = 29/180 (16%)
Query: 228 EELEEILSKLKESM--QSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCI 285
+E EE ++ ++ Q D QA WN G+ L GR + +I+ L + P+
Sbjct: 238 KEYEEAIASYDAALKIQPDKHQA--WNNRGIALGNLGRNEDAIASYDQALKIQPD----- 290
Query: 286 GNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCK--YGSVLAGAGANTGE 343
A++ G+ C++D A+ +Y A L + Y G + G
Sbjct: 291 --YHQAWYNRGNALDELGCYED----------AIASYDAALKIQPDYHQAWYNRGNDLGN 338
Query: 344 GACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 403
+ A A C AALK P W N NA G + ++A K++P+
Sbjct: 339 LGRYEDAIA------CYDAALKIQPDKHQAWNNRGNALGNLGRYEDEIASYDQALKIQPD 392
>gi|440804030|gb|ELR24913.1| tetratricopeptide repeat domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 260
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Query: 255 GLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQN 314
G LL GR Q ++S L ++ + PN+ D + G Y GD + + + F ++ D N
Sbjct: 142 GDALLCLGRHQEALSYLDRVIEMRPNHIDALLARGEVYMDLGDDKSAMRDFNEVRFWDPN 201
Query: 315 HPAALINYAALLLCKYGSVLAG 336
+P AL YAA LL K +AG
Sbjct: 202 NPDALF-YAASLLRKTMKKIAG 222
>gi|434398850|ref|YP_007132854.1| glycosyl transferase family 2 [Stanieria cyanosphaera PCC 7437]
gi|428269947|gb|AFZ35888.1| glycosyl transferase family 2 [Stanieria cyanosphaera PCC 7437]
Length = 397
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 77/176 (43%), Gaps = 24/176 (13%)
Query: 136 EEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKA--EEILLRCEAD 193
++ + LK GL + P ++ LG Y + G KA Y+KA + IL
Sbjct: 219 KQGIKFLKQGLKSNQAEAPVLYELYYSLGNAYLKQGNFAKAQEQYQKAISQNIL------ 272
Query: 194 IARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNT 253
P+L I+ A L +L K ++L E + KL D A+ +
Sbjct: 273 ---PKLKIGGYINLAGLL-------QNLGKLTTAKQLYEAVLKL------DPNLAIAYYN 316
Query: 254 LGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLI 309
LG+ L + +I + ++PNN D NLG+ Y+Q+G +++S + F+ I
Sbjct: 317 LGMTLKGLKQYPEAIKAYQKAIELEPNNADAYQNLGVVYYQAGYLKESLETFEKAI 372
>gi|108762237|ref|YP_633061.1| hypothetical protein MXAN_4904 [Myxococcus xanthus DK 1622]
gi|14517942|gb|AAK64445.1|AF377339_6 serine/threonine kinase associate protein KapB [Myxococcus xanthus
DZF1]
gi|108466117|gb|ABF91302.1| tetratricopeptide repeat protein [Myxococcus xanthus DK 1622]
Length = 271
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 75/165 (45%), Gaps = 14/165 (8%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 213
P +AHAH L +Y +A+S Y A + L E+ A L + H + +
Sbjct: 42 PSSAHAHDNLATVYAEKKLFREALSEYLTA--LKLEPESATAHYNLACFLSTHAGEMAVE 99
Query: 214 ESSGDNSLDKELEPEEL------------EEILSKLKESMQSDTRQAVVWNTLGLILLKS 261
E LD E L EE + +L+ +++ D++ A + L +++
Sbjct: 100 EYKEAIELDPEYPDAHLNLGLTYADQGRVEEAMRELQTAIELDSQDAFPRHELAALMMDE 159
Query: 262 GRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQ 306
G +S+I+ L ++ ++P+N + +LGI + Q G ++ + ++
Sbjct: 160 GDYRSAITQLKEVVRLEPDNFEAQLDLGICFAQKGFYAEAERAYE 204
>gi|339484229|ref|YP_004696015.1| hypothetical protein Nit79A3_2865 [Nitrosomonas sp. Is79A3]
gi|338806374|gb|AEJ02616.1| Tetratricopeptide TPR_2 repeat-containing protein [Nitrosomonas sp.
Is79A3]
Length = 440
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 68/156 (43%), Gaps = 18/156 (11%)
Query: 181 EKAEEILLR-CEADIARPELLSLVQIHHAQCLLPESSGDN---SLDKE------------ 224
++AE+ LR C P+ L L+ I +AQ +++ DN ++DK+
Sbjct: 31 QEAEKHCLRICTVAPNLPDALHLLAIIYAQTGHYQAANDNFFKAIDKDPSRADFYSNYGN 90
Query: 225 --LEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNC 282
E +EE + +S+ D +A N LG + L RL+ ++ L + P
Sbjct: 91 ALWEQNRIEEAIHYCHQSLALDANRAEAHNILGNVYLSQNRLEEAVISFRKALEIHPTYV 150
Query: 283 DCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAA 318
+ NLG A + E + C++ + +N+P A
Sbjct: 151 HVLNNLGNALQKLNQAEDAVNCYRQALKLQENYPEA 186
>gi|392347771|ref|XP_342789.4| PREDICTED: transmembrane and TPR repeat-containing protein 1-like
isoform 2 [Rattus norvegicus]
Length = 942
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 75/338 (22%), Positives = 139/338 (41%), Gaps = 54/338 (15%)
Query: 228 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 287
E+ EE + LKES++ A +++L +L + R + + V + + P++ D N
Sbjct: 622 EKTEEAIVLLKESIKYGPDFADAYSSLASLLAEQERFKEAEDVYQAGIKNCPDSSDLHNN 681
Query: 288 LGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL 347
+ SG E++ +Q I +H A++N G + G N+
Sbjct: 682 YAVFLVDSGFPEKAVAHYQQAIQLSPSHHVAVVNL--------GRLHRSLGENS------ 727
Query: 348 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 407
+A+E AL+ + A + + L YY TG H+ + + +A L+P+
Sbjct: 728 -------MAEEWYRRALQVA-RTAEVLSPLGALYYNTGRHKEALEVYREAVSLQPSQRDL 779
Query: 408 RYAVA-----VSRIKDAERSQEPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFAAV-- 460
R A+A + + K+AE+ + S + +P +E + +A+
Sbjct: 780 RLALAQVLAVMGQTKEAEK--------------ITSHIVSEEPRCLE---CYRLLSAIYS 822
Query: 461 QKTHHEVAAAFETEENELS-KMEECAGAGESAF-----LDQASAVNVAKECLLAALKADP 514
++ HHE A E E L K ++ E F L + + ++ A E AA+ DP
Sbjct: 823 KQEHHE--KALEAIEKALQLKPKDPKVISELFFTKGNQLREQNLLDKAFESYEAAVTLDP 880
Query: 515 KAAHIWANLANAYYLTGDHRSSGKCLEKVLMVYCSSNL 552
A W N+ ++ G + + E+ L + S L
Sbjct: 881 DQAQAWMNMGGIRHIQGSYVPARVYYERALRLVPESKL 918
>gi|116622726|ref|YP_824882.1| hypothetical protein Acid_3625 [Candidatus Solibacter usitatus
Ellin6076]
gi|116225888|gb|ABJ84597.1| Tetratricopeptide TPR_2 repeat protein [Candidatus Solibacter
usitatus Ellin6076]
Length = 547
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 66/180 (36%), Gaps = 13/180 (7%)
Query: 251 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 310
W L L KSGR + + S + + P +C+ NLGI Q+GD + ++ I
Sbjct: 269 WFNLALAHQKSGRFEQAAEAYSECVKLRPQSCESHTNLGIVREQTGDTAGARSSYERAIK 328
Query: 311 KDQNHPAALINYAALLLCK---------YGSVLAGAG----ANTGEGACLDQASAVNVAK 357
+ A L N A LL Y VL A A G Q A
Sbjct: 329 AGPDALAPLWNLALLLEHAGQFEESERYYKQVLDRAPKEEEARFRMGFLRLQREDYRGAA 388
Query: 358 ECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIK 417
E LK P ANLA AY G+ + + EK +P M +A I+
Sbjct: 389 EAFEGCLKYRPAWPEAHANLALAYSGMGERDHAERLYEKMLDADPKSMDALRGLAALSIQ 448
>gi|386001437|ref|YP_005919736.1| TPR-repeat protein [Methanosaeta harundinacea 6Ac]
gi|357209493|gb|AET64113.1| TPR-repeat protein [Methanosaeta harundinacea 6Ac]
Length = 501
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 63/168 (37%), Gaps = 21/168 (12%)
Query: 236 KLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQS 295
+ E++ D + W GL L GRL ++ + L++DP + N G+A
Sbjct: 254 RYDEAISIDPASPLAWGGKGLSLYDGGRLSEAVVAYDTALSLDPQDPYVWNNKGVALRDL 313
Query: 296 GDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNV 355
G + ++ + + I D + A N +G LD+
Sbjct: 314 GRLSEAVEAYDVAISLDPQYSHAWYN---------------------KGIALDEMGEDEK 352
Query: 356 AKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 403
A E A+ DP+ A+ W N A + G + K + A L+P
Sbjct: 353 AIEAYDMAISLDPEDANAWNNKGVALFGQGQLSEAIKAYDVAIVLDPG 400
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 77/220 (35%), Gaps = 34/220 (15%)
Query: 230 LEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLG 289
L E + ++ D + VWN G+ L GRL ++ +++DP N G
Sbjct: 282 LSEAVVAYDTALSLDPQDPYVWNNKGVALRDLGRLSEAVEAYDVAISLDPQYSHAWYNKG 341
Query: 290 IAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQ 349
IA + G+ E++ + + I D A N L G+G +
Sbjct: 342 IALDEMGEDEKAIEAYDMAISLDPEDANAWNNKGVALF--------------GQGQLSEA 387
Query: 350 ASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST-- 407
A +V A+ DP A W N A Y G + + + A L+P
Sbjct: 388 IKAYDV-------AIVLDPGYAQAWNNKGVALYDQGRLSEAVEAYDMALSLDPAYHHAWM 440
Query: 408 ----------RYAVAVSRIKDAERSQEPTEQLSWAGNEMA 437
RY AV I D Q P + +W G A
Sbjct: 441 NKGLALRSLGRYEEAV-LIYDEVIRQRPEDGDAWVGRGAA 479
>gi|302339094|ref|YP_003804300.1| hypothetical protein Spirs_2596 [Spirochaeta smaragdinae DSM 11293]
gi|301636279|gb|ADK81706.1| Tetratricopeptide TPR_2 repeat protein [Spirochaeta smaragdinae DSM
11293]
Length = 369
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 45/83 (54%)
Query: 237 LKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSG 296
L ++++ + ++ ++N L + L++ G VL A++P N I N+ I ++
Sbjct: 280 LYKALELEDKEVDIYNELAICLMELGEYDQCRVVLEKAKAIEPQNVKIISNIAILELKTD 339
Query: 297 DMEQSAKCFQDLILKDQNHPAAL 319
+ E++ +CF++++ D P AL
Sbjct: 340 NNEEAQRCFREILKIDPQDPLAL 362
>gi|197102526|ref|NP_001127296.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
110 kDa subunit [Pongo abelii]
gi|55727502|emb|CAH90506.1| hypothetical protein [Pongo abelii]
Length = 471
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 63/158 (39%), Gaps = 21/158 (13%)
Query: 248 AVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQD 307
A ++ LG + + G+LQ +I L + P+ D NL A +GDME + + +
Sbjct: 89 AEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAY-- 146
Query: 308 LILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKAD 367
+ + Y L C + G L + AK C L A++
Sbjct: 147 ---------VSALQYNPDLYC----------VRSDLGNLLKALGRLEEAKACYLKAIETQ 187
Query: 368 PKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 405
P A W+NL + G+ + EKA L+PN +
Sbjct: 188 PNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL 225
Score = 39.3 bits (90), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 70/330 (21%), Positives = 131/330 (39%), Gaps = 67/330 (20%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
LEE + +++++ AV W+ LG + G + +I + +DPN D
Sbjct: 172 RLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLD----- 226
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL- 347
AY G++ + A+ F + AA + AL L +V+ G AC+
Sbjct: 227 --AYINLGNVLKEARIFDRAV-------AAYLR--ALSLSPNHAVV------HGNLACVY 269
Query: 348 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 407
+ +++A + A++ P + NLANA G + C A +L P
Sbjct: 270 YEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPT---- 325
Query: 408 RYAVAVSRIKDAERSQ--------------EPTEQLSWAGNEMASILREGDPVQIEPPIA 453
+A +++ + + +R Q E + + A + +AS+L++ +Q E +
Sbjct: 326 -HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQ-EALMH 383
Query: 454 WAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKAD 513
+ + T A A+ N L +M++ G A +C A++ +
Sbjct: 384 YKEAIRISPT---FADAYSNMGNTLKEMQDVQG---------------ALQCYTRAIQIN 425
Query: 514 PKAAHIWANLANAYYLTGDHRSSGKCLEKV 543
P A +NLA+ H+ SG E +
Sbjct: 426 PAFADAHSNLASI------HKDSGNIPEAI 449
>gi|350561806|ref|ZP_08930644.1| Tetratricopeptide TPR_1 repeat-containing protein [Thioalkalivibrio
thiocyanoxidans ARh 4]
gi|349780838|gb|EGZ35156.1| Tetratricopeptide TPR_1 repeat-containing protein [Thioalkalivibrio
thiocyanoxidans ARh 4]
Length = 765
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 30/57 (52%)
Query: 242 QSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDM 298
+ D + V N LGL+L SGR Q + L S +A D N GNL +AY + G +
Sbjct: 204 RGDVARGAVLNNLGLLLRDSGRRQEAAGALRSAVAADSGNWRARGNLALAYLEQGRI 260
>gi|326431070|gb|EGD76640.1| tetratricopeptide protein, variant [Salpingoeca sp. ATCC 50818]
Length = 753
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 117/304 (38%), Gaps = 50/304 (16%)
Query: 129 GTSSSSREEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILL 188
G + + ++ ++L L + K P A + LG +Y GQ KA+ +EKA I
Sbjct: 270 GEYAKAIQQYENALAIRLETLGEKHPNTADTYNNLGSVYSSEGQYDKAIHFHEKALAI-- 327
Query: 189 RCEADIARPELLSLVQIHHAQCLLP-----ESSGDNSLDKELEPEELE-----EILSKLK 238
R E L A L + GD DK + E + E+L + K
Sbjct: 328 -------RVETLGEKHSRTASAYLGLGLAYQRKGD--YDKAIHFHEKDLAITAEVLGE-K 377
Query: 239 ESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAV--------DPNNCDCIGNLGI 290
+DT +N LG+ G +I LA+ P+ D NLG
Sbjct: 378 HPSTADT-----YNNLGIAYRSKGEYGKAIDYYEKALAIRVKALGEKHPSTADTYNNLGS 432
Query: 291 AYFQSGDMEQSAKCF-QDLILK----DQNHPAALINYAALLLCKYGSVLAGAGANTGEGA 345
AY GD +++ + + L ++ Q HP+ +Y L + Y G A
Sbjct: 433 AYDDKGDYDKAIALYAKALAIRVETLGQKHPSTANSYLGLGIANYSK-----GDYDKAIA 487
Query: 346 CLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 405
++A A+ V + + P A + NL AY+ G++ + + EKA + +
Sbjct: 488 FYEKALAITV-----VVLGEKHPSTATTYNNLGEAYHSKGEYEKAIELYEKALAITVETL 542
Query: 406 STRY 409
++
Sbjct: 543 GVKH 546
>gi|323526980|ref|YP_004229133.1| tetratricopeptide repeat-containing protein [Burkholderia sp.
CCGE1001]
gi|323383982|gb|ADX56073.1| Tetratricopeptide TPR_1 repeat-containing protein [Burkholderia sp.
CCGE1001]
Length = 627
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 72/169 (42%), Gaps = 25/169 (14%)
Query: 254 LGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQ-DLILKD 312
LG L G++ +I+ + L + P+ NLG AY +G E +A F+ L L+
Sbjct: 87 LGNALKALGQIDEAIAQFRNALTLAPSFPMAHYNLGNAYAAAGRHEDAADAFRRSLRLQP 146
Query: 313 QN----------------HPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVA 356
+ H A+ ++ L + G AGA G L+ + A
Sbjct: 147 DDASSHNNLGNALHALGRHEEAIASFRRTLELRPGH----AGALNNMGMSLNALGRADEA 202
Query: 357 KECLLAALKADPK--AAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 403
C AAL A+P+ AAH NLAN + TG H + E A L+PN
Sbjct: 203 IPCFEAALAAEPRFVAAHF--NLANTFDATGRHAQAVASFEAALALQPN 249
Score = 39.3 bits (90), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 77/189 (40%), Gaps = 13/189 (6%)
Query: 231 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 290
E+ + S++ A N LG L GR + +I+ L + P + + N+G+
Sbjct: 132 EDAADAFRRSLRLQPDDASSHNNLGNALHALGRHEEAIASFRRTLELRPGHAGALNNMGM 191
Query: 291 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYA---------ALLLCKYGSVLA----GA 337
+ G +++ CF+ + + AA N A A + + + LA
Sbjct: 192 SLNALGRADEAIPCFEAALAAEPRFVAAHFNLANTFDATGRHAQAVASFEAALALQPNLP 251
Query: 338 GANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKA 397
A G G L A L ++ DP+ A W L +A+ G H ++ + ++A
Sbjct: 252 PAIFGMGNALAALGRHTEAIPYLERSVGLDPQFALAWLCLGSAHQGLGAHATALRAFDQA 311
Query: 398 AKLEPNCMS 406
+L+P+ S
Sbjct: 312 LRLQPDLAS 320
>gi|406910817|gb|EKD50743.1| hypothetical protein ACD_62C00440G0005 [uncultured bacterium]
Length = 278
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 4/90 (4%)
Query: 238 KESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQS-- 295
K+ + +D A V N+LGLI ++ G S+ S L L ++ N +C NLG Y +S
Sbjct: 149 KQMLTTDPNNASVQNSLGLIYIQKGLYSSATSYLEKALELNENCPECFNNLG--YLKSLL 206
Query: 296 GDMEQSAKCFQDLILKDQNHPAALINYAAL 325
G+ ++A F+ + N+P N A L
Sbjct: 207 GETVEAAAYFEKAMGLSPNYPDPYFNLAVL 236
>gi|298492037|ref|YP_003722214.1| hypothetical protein Aazo_3466 ['Nostoc azollae' 0708]
gi|298233955|gb|ADI65091.1| TPR repeat-containing protein ['Nostoc azollae' 0708]
Length = 374
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 72/167 (43%), Gaps = 21/167 (12%)
Query: 231 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 290
E ++ ++++ ++ + A LG+IL + R Q +I+ + +D NN + NL I
Sbjct: 148 EAAIAAYRQALAANPKMAAAQYNLGVILYEEERCQEAIAAYQEAINLDRNNANAYFNLAI 207
Query: 291 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQA 350
A Q G +EQ+ ++ ++ + + A N +L++ + E + Q
Sbjct: 208 ALQQEGQLEQAIATYRQILKLNPENTVAYNNLGSLMVIQ---------GQPSEAIAIYQ- 257
Query: 351 SAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKA 397
A+ +PK A + NL Y G+ + + L++A
Sbjct: 258 -----------KAIGQNPKNALAYYNLGVTLYNQGNLKEANAALKRA 293
Score = 38.9 bits (89), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 70/172 (40%), Gaps = 25/172 (14%)
Query: 151 RKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQC 210
R +P ++ LGL Q+ GQ A+++Y +A +A ++ Q +
Sbjct: 125 RLIPNFGEFYYNLGLALQKQGQKEAAIAAYRQA----------LAANPKMAAAQYNLGVI 174
Query: 211 LLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISV 270
L E E +E ++ +E++ D A + L + L + G+L+ +I+
Sbjct: 175 LYEE-------------ERCQEAIAAYQEAINLDRNNANAYFNLAIALQQEGQLEQAIAT 221
Query: 271 LSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINY 322
+L ++P N NLG G ++ +Q I QN AL Y
Sbjct: 222 YRQILKLNPENTVAYNNLGSLMVIQGQPSEAIAIYQKAI--GQNPKNALAYY 271
>gi|347538703|ref|YP_004846127.1| TPR domain/sulfotransferase domain containing protein
[Pseudogulbenkiania sp. NH8B]
gi|345641880|dbj|BAK75713.1| TPR domain/sulfotransferase domain protein [Pseudogulbenkiania sp.
NH8B]
Length = 700
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 43/76 (56%)
Query: 251 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 310
WN LG++L ++G+L+ S L ++A++P + NLG + + G M+ + C++ +
Sbjct: 117 WNNLGIVLQEAGKLEQSRVCLERVVALNPEWPEAQNNLGNTWRRLGQMDHAEACYRQALA 176
Query: 311 KDQNHPAALINYAALL 326
+ ++ A N A LL
Sbjct: 177 LNPSYAEAHSNLAFLL 192
>gi|291569240|dbj|BAI91512.1| TPR domain protein [Arthrospira platensis NIES-39]
Length = 1337
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 68/343 (19%), Positives = 132/343 (38%), Gaps = 56/343 (16%)
Query: 92 VEGKKINKLGKCRSRISSKMDSALEFGVDADGDQSGLGTSSSS---REEKVSSLKTGLVH 148
V G + LG+ ISS D A++F D + G + ++ E+ +SS +
Sbjct: 250 VRGSALGNLGEYEKAISS-YDQAIKFKPDLHEAWNNRGNALANLGEYEKAISSCDQAI-- 306
Query: 149 VARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHA 208
+ P A + G+ LG+ KA+SSY++A + +P+L
Sbjct: 307 --KFKPDYHEAWLVRGVALSYLGEYEKAISSYDQAIKF---------KPDL--------- 346
Query: 209 QCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSI 268
+ +N + E E+ +S ++++ W GL L G + +I
Sbjct: 347 -----HEAWNNRGNALANLGEYEKAISSYDQAIKFKPDYHEAWYNRGLALGNLGEYEKAI 401
Query: 269 SVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCF-QDLILKDQNHPAALINYAALLL 327
S + P+ + N G+A + G+ E++ + Q + K H A +
Sbjct: 402 SSYDQAIKFKPDYHEAWFNRGLALYDLGEYEKAISSYDQAIKFKPDYHEAWFVR------ 455
Query: 328 CKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDH 387
G L+ G + + DQ A+K P W+N +A G++
Sbjct: 456 ---GVALSYLGEHEKAISSYDQ-------------AIKIKPDLHEAWSNRGSALSHLGEY 499
Query: 388 RSSGKCLEKAAKLEPNCMSTRY--AVAVSRIKDAERSQEPTEQ 428
+ ++A K +P+ + +A+S + + E++ +Q
Sbjct: 500 EKAISSYDQAIKFKPDDHEAWFNRGLALSYLGEYEKAISSYDQ 542
Score = 38.5 bits (88), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 74/327 (22%), Positives = 120/327 (36%), Gaps = 44/327 (13%)
Query: 94 GKKINKLGKCRSRISSKMDSALEFGVDAD--GDQSGLGTSSSSREEK-VSSLKTGLVHVA 150
G + LG+ ISS D A++F D GL EK +SS +
Sbjct: 388 GLALGNLGEYEKAISS-YDQAIKFKPDYHEAWFNRGLALYDLGEYEKAISSYDQAI---- 442
Query: 151 RKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQC 210
+ P A F+ G+ LG+ KA+SSY++A +I +P+L H A
Sbjct: 443 KFKPDYHEAWFVRGVALSYLGEHEKAISSYDQAIKI---------KPDL------HEAW- 486
Query: 211 LLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISV 270
S S L E E+ +S ++++ W GL L G + +IS
Sbjct: 487 -----SNRGSALSHL--GEYEKAISSYDQAIKFKPDDHEAWFNRGLALSYLGEYEKAISS 539
Query: 271 LSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCF-QDLILKDQNHPAALINYAAL-LLC 328
+ P+ + N G A G+ E++ + Q + K +H A AL L
Sbjct: 540 YDQAIKFKPDYHEAWSNRGGALSDLGEYEKAISSYDQAIKFKPDDHQAWSNRGVALSYLG 599
Query: 329 KYGSVLAGAG-----------ANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANL 377
+Y ++ A + G L A A+K P W+N
Sbjct: 600 EYEKAISSYDQAIKFKPDFHEAWSNRGLALSYLGEYEKAISSYDQAIKFKPDYHEAWSNR 659
Query: 378 ANAYYLTGDHRSSGKCLEKAAKLEPNC 404
A G++ + ++A K +P+
Sbjct: 660 GGALSHLGEYEKAISSYDQAIKFKPDF 686
>gi|134293931|ref|YP_001117667.1| hypothetical protein Bcep1808_5253 [Burkholderia vietnamiensis G4]
gi|134137088|gb|ABO58202.1| TPR repeat-containing protein [Burkholderia vietnamiensis G4]
Length = 1189
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 48/95 (50%), Gaps = 9/95 (9%)
Query: 260 KSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAAL 319
+ G LQ + ++LLA DP++ + + LG+ FQ G ++ + + I + Q P AL
Sbjct: 481 RDGALQQAEHAYAALLAADPDHPEALHLLGVLRFQQGRLDDAEPLMRRSIER-QPAPLAL 539
Query: 320 INYAALLLCKYGSVLAGAGANTGEGACLDQASAVN 354
NY+A VLAG G A LD A A+N
Sbjct: 540 ANYSA--------VLAGLGRTHDALARLDDALAIN 566
Score = 40.4 bits (93), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 68/178 (38%), Gaps = 17/178 (9%)
Query: 255 GLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQN 314
GL L + GR + + LA+ P + D + G+ + D E++ F I
Sbjct: 645 GLALRELGRHRDAADSYDHALALAPGSADVLFLRGVVHLDLHDPERALTDFNAAIATKPT 704
Query: 315 HPAALINYA-----------ALLLCKYGSVL----AGAGANTGEGACLDQASAVNVAKEC 359
AL+N A ALL C L A A A G A Q A +
Sbjct: 705 FVDALVNSAIALEQLGRHDEALLRCDRALALEPRHACALATRGNAAS--QLGRHTDAIDS 762
Query: 360 LLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIK 417
AL ADP + + N A+A H + E+A +L+P C + A R++
Sbjct: 763 YARALDADPLSTVVLCNFADALMRVDRHADAHALCERALELDPQCAPAWFTRARVRLE 820
>gi|344345323|ref|ZP_08776177.1| Tetratricopeptide TPR_2 repeat-containing protein [Marichromatium
purpuratum 984]
gi|343803152|gb|EGV21064.1| Tetratricopeptide TPR_2 repeat-containing protein [Marichromatium
purpuratum 984]
Length = 544
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 72/172 (41%), Gaps = 21/172 (12%)
Query: 232 EILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIA 291
E L+ L+ ++ + R + N + LL+ GR + ++ L V P++ + NLG+A
Sbjct: 110 EALTVLEGALALEPRDPEILNAIATALLRLGRGEDALGYYRRTLEVAPDHAEAHYNLGLA 169
Query: 292 YFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQAS 351
+ G ++++ KC+ D P A N G +Q
Sbjct: 170 LHEFGRLDEALKCYVRANAIDPELPQACNN---------------------AGNVCNQLG 208
Query: 352 AVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 403
+ A + AL DP+ A + NLA+A ++ + LE+A L P+
Sbjct: 209 RLQQAIDWFSRALAQDPRNADVLNNLASAQIRACLFEAALRTLERALALVPD 260
Score = 42.7 bits (99), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 108/284 (38%), Gaps = 56/284 (19%)
Query: 145 GLVHVARKM----PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELL 200
G H AR++ P++ A LGL+ R +A++ E A + R PE+L
Sbjct: 76 GAEHEARRLVASHPRDVFARKALGLILLRRRHHAEALTVLEGALALEPR------DPEIL 129
Query: 201 SLVQIHHAQCLLPESSGDNSLDK-----ELEPEELE---------EILSKLKESMQSDTR 246
+ + A LL G+++L E+ P+ E +L E+++ R
Sbjct: 130 NAI----ATALLRLGRGEDALGYYRRTLEVAPDHAEAHYNLGLALHEFGRLDEALKCYVR 185
Query: 247 QAVV-------WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDME 299
+ N G + + GRLQ +I S LA DP N D + NL A ++ E
Sbjct: 186 ANAIDPELPQACNNAGNVCNQLGRLQQAIDWFSRALAQDPRNADVLNNLASAQIRACLFE 245
Query: 300 QSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKEC 359
+ + + + +H AL N G L + + A++
Sbjct: 246 AALRTLERALALVPDHAEALNN---------------------RGNALVELGRLEAAQQS 284
Query: 360 LLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 403
L AL+ P A + NL N L + +A L+P+
Sbjct: 285 YLDALRVRPDYADAYCNLGNVLDLLCKPLQAIDSYRRALALKPD 328
>gi|421597100|ref|ZP_16040780.1| hypothetical protein BCCGELA001_07294 [Bradyrhizobium sp.
CCGE-LA001]
gi|404270790|gb|EJZ34790.1| hypothetical protein BCCGELA001_07294 [Bradyrhizobium sp.
CCGE-LA001]
Length = 452
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 90/227 (39%), Gaps = 27/227 (11%)
Query: 211 LLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISV 270
LL E+ GD L + L ++++ D + A + G++ RL +++
Sbjct: 106 LLREAGGD-----------LNRAAADLTKAIELDPKDAEAYELRGVVYTNQRRLDRALAD 154
Query: 271 LSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKY 330
+ + P++ + G+AY+ GD E++ K F + + D N N A K
Sbjct: 155 YDQAIKLKPDDAQAWSDRGVAYYLGGDNEKAVKNFDEALRLDPNRARTYTNRGA-AYKKL 213
Query: 331 GSVLAGAGANTGEGACLD-QASAVNVAKECLLAALKADPKA-------------AHIWAN 376
G L A A+ GE LD + + AA+ KA A+ N
Sbjct: 214 GQ-LNKAVADDGEAIRLDPRVPEYYDNRGLTYAAMGEYDKAIADYDQAIRREQRANFLTN 272
Query: 377 LANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQ 423
++Y G+ ++ E A KL+PN T AV K ER +
Sbjct: 273 RGDSYQFKGELGAALSDYEAALKLDPNFAKTYNNRAVLYKKMGERKK 319
Score = 42.0 bits (97), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 113/285 (39%), Gaps = 52/285 (18%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 213
PK+A A+ L G++Y + +A++ Y++A ++ + D A Q + +
Sbjct: 129 PKDAEAYELRGVVYTNQRRLDRALADYDQA----IKLKPDDA--------QAWSDRGVAY 176
Query: 214 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 273
GDN E+ + E+++ D +A + G K G+L +++
Sbjct: 177 YLGGDN-----------EKAVKNFDEALRLDPNRARTYTNRGAAYKKLGQLNKAVADDGE 225
Query: 274 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSV 333
+ +DP + N G+ Y G+ +++ + I ++Q A L G
Sbjct: 226 AIRLDPRVPEYYDNRGLTYAAMGEYDKAIADYDQAIRREQR---------ANFLTNRGDS 276
Query: 334 LAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKC 393
G GA L A ALK DP A + N A Y G+ + +
Sbjct: 277 YQFKGE---LGAALSDYEA----------ALKLDPNFAKTYNNRAVLYKKMGERKKALAD 323
Query: 394 LEKAAKLEP---NCMSTRYAVAVSRIKDAERSQEPTEQLSW-AGN 434
E A KL+P N + R V ++ I A+ EP LS AGN
Sbjct: 324 YETALKLDPGNENATNGR-RVMIAEI--AKFGAEPPRALSAEAGN 365
>gi|433777190|ref|YP_007307657.1| Flp pilus assembly protein TadD [Mesorhizobium australicum WSM2073]
gi|433669205|gb|AGB48281.1| Flp pilus assembly protein TadD [Mesorhizobium australicum WSM2073]
Length = 276
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 68/172 (39%), Gaps = 36/172 (20%)
Query: 259 LKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL---KDQNH 315
+ +G L ++ + L A +PN+ N A GD +QS + L + KD+
Sbjct: 51 MSAGELHNATAALGQSYARNPNDKRIATNFAAALQMDGDADQSLAVMRKLAIAYPKDRE- 109
Query: 316 PAALINYAALLLCKYGSVLAGAG-----------ANT----------GEGACLDQASAVN 354
+L YG LA G A T E A LDQ +
Sbjct: 110 ----------VLAAYGKALAANGQLEAALDAVRRAQTPEYPDWRLVSAEAAILDQVGQKD 159
Query: 355 VAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMS 406
A++ AL+ P I +NL +Y L GD R++ + AA+ +PN S
Sbjct: 160 EARQLYRKALELKPNEPSILSNLGMSYVLEGDLRTAETYMRSAAQ-QPNADS 210
>gi|15678111|ref|NP_275226.1| O-linked GlcNAc transferase [Methanothermobacter thermautotrophicus
str. Delta H]
gi|2621120|gb|AAB84589.1| O-linked GlcNAc transferase [Methanothermobacter thermautotrophicus
str. Delta H]
Length = 379
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 67/310 (21%), Positives = 115/310 (37%), Gaps = 41/310 (13%)
Query: 259 LKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAA 318
LK G+ + ++ L PNN + + I + E++ +C++ ILK+ A
Sbjct: 27 LKQGKYKEALKEFRKALKARPNNPEILHYNAITLLKLKRPEKALECYEK-ILKNNPKLAE 85
Query: 319 LINYAALLLCKYGSVLAG--------------AGANTGEGACLDQASAVNVAKECLLAAL 364
N L+L + G AGA + L + + A EC AL
Sbjct: 86 AWNNKGLVLKELGRYDEALECYEKALKINPKYAGAWNNKALVLKELGRYDEALECYEKAL 145
Query: 365 KADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP---NCMSTRYAVAVSRIKDAER 421
+ +PK A W N + ++ + KC EKA +L P T+ + + +K E
Sbjct: 146 QINPKLADAWYNKGSVLIYLKKYKKALKCFEKAIELNPKNYRAWGTK-GITLHNLKIYEE 204
Query: 422 SQEPTEQLSWAGNEMASILREGDPVQIEPP--IAWAGFAAVQKTHHEVAAAFETEENELS 479
+ + +++ +Q+ P AW V + E E L
Sbjct: 205 ALKCYDKV----------------LQLNPQDDKAWNNKGLVFNELGRYDESLECYEKALQ 248
Query: 480 ---KMEECAGAGESAFLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSS 536
K+ E A + L + A EC AL+ DP+ W N G ++ +
Sbjct: 249 INPKLAE-AWNNKGVVLSELGRYEEALECYEKALEIDPEDDKTWNNKGLVLEELGKYKDA 307
Query: 537 GKCLEKVLMV 546
+C +K L +
Sbjct: 308 LECFQKALEI 317
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 65/177 (36%), Gaps = 21/177 (11%)
Query: 231 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 290
EE L + +Q + + WN GL+ + GR S+ L ++P + N G+
Sbjct: 203 EEALKCYDKVLQLNPQDDKAWNNKGLVFNELGRYDESLECYEKALQINPKLAEAWNNKGV 262
Query: 291 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQA 350
+ G E++ +C++ + D N +G L++
Sbjct: 263 VLSELGRYEEALECYEKALEIDPEDDKTWNN---------------------KGLVLEEL 301
Query: 351 SAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 407
A EC AL+ +P+ A W S KC +KA KL P +T
Sbjct: 302 GKYKDALECFQKALEINPEFADAWKWKGIILEDLKKPEESLKCYKKALKLNPPKQNT 358
>gi|16125706|ref|NP_420270.1| flagellin modification protein FlmG [Caulobacter crescentus CB15]
gi|221234461|ref|YP_002516897.1| FlbA protein [Caulobacter crescentus NA1000]
gi|2506426|sp|P21296.2|FLBA_CAUCR RecName: Full=Protein FlbA
gi|896458|gb|AAC62523.1| FlbA [Caulobacter crescentus CB15]
gi|13422826|gb|AAK23438.1| flagellin modification protein FlmG [Caulobacter crescentus CB15]
gi|220963633|gb|ACL94989.1| FlbA protein [Caulobacter crescentus NA1000]
Length = 596
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 77/181 (42%), Gaps = 23/181 (12%)
Query: 241 MQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQ 300
++ D R + W+ L + K+G SS+ + LA+ P++ G+LG F+ E
Sbjct: 84 LEKDERLGLAWHILAIAREKTGDFASSLRAYEAALALLPDHGPVAGDLGRLAFRMNMPEL 143
Query: 301 SAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGAC-LDQASAVNVAKEC 359
+AK F A L + V GAN AC L + + + A E
Sbjct: 144 AAKFF-----------------AHYRLARPDDV---EGANN--LACALRELNRESEAIEV 181
Query: 360 LLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDA 419
L AAL A+P+AA +W L GD S +++ +L P+ + A +R+
Sbjct: 182 LKAALGANPEAAVLWNTLGTVLCNIGDAAGSIVFFDESLRLAPDFSKAYHNRAFARLDLG 241
Query: 420 E 420
E
Sbjct: 242 E 242
Score = 38.9 bits (89), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 67/160 (41%), Gaps = 16/160 (10%)
Query: 159 AHFLLGLMYQRLGQPLKAVSSYEKAEEILLR---CEADIAR-------PELLSLVQIHHA 208
A +L + ++ G ++ +YE A +L D+ R PEL + H+
Sbjct: 93 AWHILAIAREKTGDFASSLRAYEAALALLPDHGPVAGDLGRLAFRMNMPELAAKFFAHYR 152
Query: 209 QCLLPESSGDNSLD---KELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQ 265
+ G N+L +EL E E + LK ++ ++ AV+WNTLG +L G
Sbjct: 153 LARPDDVEGANNLACALRELNRES--EAIEVLKAALGANPEAAVLWNTLGTVLCNIGDAA 210
Query: 266 SSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQS-AKC 304
SI L + P+ N A G++E + A C
Sbjct: 211 GSIVFFDESLRLAPDFSKAYHNRAFARLDLGEIEAALADC 250
>gi|39998281|ref|NP_954232.1| hypothetical protein GSU3191 [Geobacter sulfurreducens PCA]
gi|409913632|ref|YP_006892097.1| hypothetical protein KN400_3128 [Geobacter sulfurreducens KN400]
gi|39985227|gb|AAR36582.1| TPR domain protein [Geobacter sulfurreducens PCA]
gi|298507217|gb|ADI85940.1| TPR domain protein [Geobacter sulfurreducens KN400]
Length = 638
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 68/302 (22%), Positives = 119/302 (39%), Gaps = 47/302 (15%)
Query: 151 RKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQC 210
R P NA H+ LG++Y+R G +AV Y++A + L E AR L + + +
Sbjct: 327 RVKPGNAANHYNLGIIYERKGLIDEAVVEYKQA--VRLSAEHGDARRRLADIYTLRGSH- 383
Query: 211 LLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISV 270
P+ +E+ +E ++ V+ L + S + +I+
Sbjct: 384 ----------------PQAIEQY----RELLKRGDSNPVLHLKLARGFMSSKNTKDAIAS 423
Query: 271 LSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDL--ILKDQNHPAALINYAALLLC 328
+ L +DP+N + L Y + M+ ++K ++++ I KD ++ +
Sbjct: 424 YNEALKLDPDNLEAHRELAAVYRKLNQMDDASKQYREVLRIKKDDAEARNILTAIYVKEK 483
Query: 329 KYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWAN------------ 376
KY ++ EG L A++ K L+ + D +A +
Sbjct: 484 KYDELV----PLLQEGVELAPNDAMSHYKLGLIHEFRKDYDSAEVSYRKATELKDDHAKA 539
Query: 377 ---LANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQEPTEQLSWAG 433
L Y TG + + LE A K +P T AV +S IKD E S EP + G
Sbjct: 540 LNALGRIYLKTGKLTEAKEALEAAKKADPGMEET--AVLLSNIKD-ELSPEPKRYVKKKG 596
Query: 434 NE 435
+
Sbjct: 597 TK 598
>gi|226226814|ref|YP_002760920.1| hypothetical protein GAU_1408 [Gemmatimonas aurantiaca T-27]
gi|226090005|dbj|BAH38450.1| hypothetical protein GAU_1408 [Gemmatimonas aurantiaca T-27]
Length = 918
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 78/317 (24%), Positives = 125/317 (39%), Gaps = 51/317 (16%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELL-SLVQIHHAQCLL 212
P + A F GL+ QR G +A +E+A +A + E+L Q A LL
Sbjct: 141 PDDGEALFERGLIEQRAGDLRRAQRWFERAVNAGAVSDARLHLAEVLYQRGQNEQALELL 200
Query: 213 PESSGDNSL--DKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISV 270
+ D+ D L L + + +MQ+ R A + L + QS +S+
Sbjct: 201 DQLLADSPRHADAHLLRGFLLGDMGHHERAMQATRRAAELNPALETV-------QSDLSI 253
Query: 271 ---------LSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALIN 321
SS++ VDP+ LG+A+ Q G ++ F+ I+ ++ L+
Sbjct: 254 DSGSTALLNASSVMVVDPDGALARYGLGLAFRQRGYFREARAEFERAIVHGEDE--RLVQ 311
Query: 322 YAALLLCKYGSVLAGAGAN--------------TGEGACLDQASAVNVAKECLLAALKAD 367
+A L AGA A G L Q V A + AL+ D
Sbjct: 312 HALAELDLIDGNSAGAQARYEHLLAEQESARWWNEHGVALHQGGNVASAADSYRRALRID 371
Query: 368 PKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQEPTE 427
P+ A + NL A GD ++ + L ++A+L+P + R +A
Sbjct: 372 PRDALAYNNLGVALADRGDTNAAREALTRSAELDPTFVRARRNLAC-------------- 417
Query: 428 QLSWAGNEMAS--ILRE 442
LSW G +A+ +LRE
Sbjct: 418 LLSWNGEGLAALDLLRE 434
>gi|188581172|ref|YP_001924617.1| hypothetical protein Mpop_1919 [Methylobacterium populi BJ001]
gi|179344670|gb|ACB80082.1| Tetratricopeptide TPR_2 repeat protein [Methylobacterium populi
BJ001]
Length = 286
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 43/92 (46%)
Query: 234 LSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYF 293
++ L + + + A + T G +SG+ +IS S + +DPN+ N +AY
Sbjct: 54 IASLSDVISRNPSDAGAYVTRGAAYARSGQFGEAISDFSKAIQLDPNSASAYNNRALAYR 113
Query: 294 QSGDMEQSAKCFQDLILKDQNHPAALINYAAL 325
Q+G + + + F I D N AA I A L
Sbjct: 114 QTGRNDAAMQDFSKAIATDPNFSAAYIGRANL 145
Score = 42.4 bits (98), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 86/193 (44%), Gaps = 23/193 (11%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPN-NCDCIGN 287
+ E +S +++Q D A +N L ++GR +++ S +A DPN + IG
Sbjct: 83 QFGEAISDFSKAIQLDPNSASAYNNRALAYRQTGRNDAAMQDFSKAIATDPNFSAAYIGR 142
Query: 288 LGIAYFQSGDME--------------QSAKCF--QDLILKDQN-HPAALINYAALLLCKY 330
+ Q GD+ +SA+ + + L+ + Q +P A+ ++AA +
Sbjct: 143 ANLERAQ-GDLNGALNDLNVAIRLAPESAEAYHARGLVRQKQGQNPEAIGDFAAAI--DR 199
Query: 331 GSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSS 390
+A A G+ L + + A E AAL + K A WA AY T + +
Sbjct: 200 NPFVAAPYAARGQ--SLISLNQYDKAIEDFNAALNVNSKDASSWAYRGLAYEKTNRRKEA 257
Query: 391 GKCLEKAAKLEPN 403
+ ++AA+L+PN
Sbjct: 258 NESYQQAARLDPN 270
>gi|206890955|ref|YP_002249256.1| TPR domain protein, [Thermodesulfovibrio yellowstonii DSM 11347]
gi|206742893|gb|ACI21950.1| TPR domain protein, putative [Thermodesulfovibrio yellowstonii DSM
11347]
Length = 542
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 95/223 (42%), Gaps = 15/223 (6%)
Query: 222 DKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNN 281
D L+ +ELE + + + ++ DT L + +K +++ +I V +L PN
Sbjct: 54 DTYLKIDELETAKNYITDVLKEDTENIDALQVLASVYVKEKKVKEAIEVYEKILQQSPNK 113
Query: 282 CDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCK---------YGS 332
+ + +G Y SG +++ + F+ ++ +D + AL + + K + +
Sbjct: 114 IEMLSKIGNLYLISGMYDKAIETFKKILKEDSENIMALHFLGIIYIEKKDFKSARESFKT 173
Query: 333 VLA----GAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHR 388
+L A T GA + A + A+ AL+ +P+ L N Y ++
Sbjct: 174 ILKLNPDYEPAYTNLGAVEELAGNLKDAELYFKKALELNPENLFARERLINLYLSQKSYK 233
Query: 389 SSGKCLE--KAAKLEPNCMSTRYAVAVSRIKDAERSQEPTEQL 429
+ K LE K K E + + A+ +IK +++ E E L
Sbjct: 234 EAIKELETLKEQKSESEQIHEKLALLYLQIKQYDKATEELEYL 276
>gi|386398767|ref|ZP_10083545.1| tetratricopeptide repeat protein,tetratricopeptide repeat protein
[Bradyrhizobium sp. WSM1253]
gi|385739393|gb|EIG59589.1| tetratricopeptide repeat protein,tetratricopeptide repeat protein
[Bradyrhizobium sp. WSM1253]
Length = 461
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 92/227 (40%), Gaps = 27/227 (11%)
Query: 211 LLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISV 270
LL E+ GD L + L ++++ + + + + G++ RL +++
Sbjct: 115 LLREAGGD-----------LNRAAADLSKAIELNPQDSESYELRGVVYTNQRRLDRALAD 163
Query: 271 LSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKY 330
+ + P+N + G+ Y+ GD E + + + + D N P + N A K
Sbjct: 164 YDQAIKLKPDNAQAWSDRGVTYYLGGDNENAIRDLSEALRLDPNRPRSYTNRGA-AYKKL 222
Query: 331 GSVLAGAGANTGEGACLDQASAVNVAKECL-LAALKADPKA-------------AHIWAN 376
G L + A+ GE LD L LAA+ KA + +AN
Sbjct: 223 GQ-LERSVADDGEAIRLDPKVPEYYDNRGLSLAAMGEYDKAIADYDQALRLAPRPNFFAN 281
Query: 377 LANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAERSQ 423
++Y+L G+ ++ E A KLEPN T AV K ER +
Sbjct: 282 RGDSYHLKGELGAALSDYEAALKLEPNFAQTYNNRAVLYKKMGERKK 328
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 81/207 (39%), Gaps = 19/207 (9%)
Query: 228 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 287
L+ L+ ++++ A W+ G+ G +++I LS L +DPN N
Sbjct: 155 RRLDRALADYDQAIKLKPDNAQAWSDRGVTYYLGGDNENAIRDLSEALRLDPNRPRSYTN 214
Query: 288 LGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL--LCKYGSVLAGAG------- 338
G AY + G +E+S + I D P N L + +Y +A
Sbjct: 215 RGAAYKKLGQLERSVADDGEAIRLDPKVPEYYDNRGLSLAAMGEYDKAIADYDQALRLAP 274
Query: 339 -----ANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKC 393
AN G+ L + A AALK +P A + N A Y G+ + +
Sbjct: 275 RPNFFANRGDSYHL--KGELGAALSDYEAALKLEPNFAQTYNNRAVLYKKMGERKKALAD 332
Query: 394 LEKAAKLEP---NCMSTRYAVAVSRIK 417
E A +L+P N + R A+ +K
Sbjct: 333 YETALRLDPGNDNAAAGRRAMIAEIVK 359
>gi|196232942|ref|ZP_03131791.1| Tetratricopeptide TPR_2 repeat protein [Chthoniobacter flavus
Ellin428]
gi|196222920|gb|EDY17441.1| Tetratricopeptide TPR_2 repeat protein [Chthoniobacter flavus
Ellin428]
Length = 743
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 73/186 (39%), Gaps = 13/186 (6%)
Query: 231 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 290
E + + ++Q A V + LG+ L G +IS L + P+ + NLG
Sbjct: 136 REAIEAFRRALQIGPVYAEVLSNLGIALATVGETTEAISRFREALQIRPDFPEAQNNLGN 195
Query: 291 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLL----------CKYGSV---LAGA 337
A Q G + ++ +C++ + + P A N +LL C ++ +
Sbjct: 196 ALQQQGSLAEAEECYRAALRLRPDFPDASNNLGNVLLEMGRPEEAVACHRRALELRPSYP 255
Query: 338 GANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKA 397
GA G V+ + A++ DP+ ++NLA G S +CL A
Sbjct: 256 GAWNSLGNACGAIGGVDESVAAYREAIRLDPRYGQAYSNLAVKLSGQGLAEESLRCLRTA 315
Query: 398 AKLEPN 403
L PN
Sbjct: 316 VDLRPN 321
Score = 39.3 bits (90), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 71/197 (36%), Gaps = 47/197 (23%)
Query: 254 LGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQ 313
LG L +SGRL + ++ + +LA +PN+ + LGI Q+G +E + + I +
Sbjct: 57 LGTQLHQSGRLVEAENLYTQVLAREPNHPEANRLLGIIAMQTGHLEAARQLLGKAIAGND 116
Query: 314 NHPAALIN----YAAL----------------------LLCKYGSVLAGAGANT------ 341
H A N Y AL +L G LA G T
Sbjct: 117 QHALAYSNLGEVYRALGQPREAIEAFRRALQIGPVYAEVLSNLGIALATVGETTEAISRF 176
Query: 342 ---------------GEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGD 386
G L Q ++ A+EC AAL+ P NL N G
Sbjct: 177 REALQIRPDFPEAQNNLGNALQQQGSLAEAEECYRAALRLRPDFPDASNNLGNVLLEMGR 236
Query: 387 HRSSGKCLEKAAKLEPN 403
+ C +A +L P+
Sbjct: 237 PEEAVACHRRALELRPS 253
>gi|87311178|ref|ZP_01093301.1| O-linked GlcNAc transferase [Blastopirellula marina DSM 3645]
gi|87286086|gb|EAQ77997.1| O-linked GlcNAc transferase [Blastopirellula marina DSM 3645]
Length = 326
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 77/201 (38%), Gaps = 26/201 (12%)
Query: 231 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCI-GNLG 289
+E L L+ ++ + + W G ++ +SGR + + L P I +LG
Sbjct: 20 DEALEHLEHALGLEPKHGQAWFAKGCVMSESGRTRDAAHCYLQALQYAPAYAALILFDLG 79
Query: 290 IAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQ 349
+ G+ E++ +CFQ + D + IN +G LD
Sbjct: 80 NCFRDMGEGERALECFQSVTELDPENADGWIN---------------------QGVVLDN 118
Query: 350 ASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRY 409
A C AA++ P+ WAN N + + C EKA +L P +R
Sbjct: 119 LGRPEEAIPCYDAAIRLAPEDVDAWANRGNCLRALCEFTDAIACYEKALELNPQ---SRA 175
Query: 410 AVAVSRIKDAERSQEPTEQLS 430
A+A I AE EP LS
Sbjct: 176 ALAGRGICVAELG-EPERGLS 195
>gi|423066045|ref|ZP_17054835.1| tetratricopeptide TPR_2 repeat protein [Arthrospira platensis C1]
gi|406712544|gb|EKD07729.1| tetratricopeptide TPR_2 repeat protein [Arthrospira platensis C1]
Length = 563
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 82/214 (38%), Gaps = 29/214 (13%)
Query: 238 KESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGD 297
K +++ A V LG +L K G ++ +I+ + PN + NLG+ QSG
Sbjct: 39 KRALEVYFPWAEVHYNLGFVLEKLGDVEDAIACYRQAIIHKPNYTNAYYNLGLILQQSGR 98
Query: 298 MEQSAKCFQDLILKDQNHPAALINYAALLLCK--YGSVLAGAGA-------------NTG 342
++ +Q I + P N +L+ + Y + L GA N G
Sbjct: 99 EIEAIAAYQSAIYLEPETPMPYSNLGGILVGRGEYQTALEILGAALKKWPQTASLHNNLG 158
Query: 343 EGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 402
Q +A L A++ P +A I NL A G H ++ +C +K L P
Sbjct: 159 RSLLGKQDGDRAIA--AFLKAVQLQPDSAIIQHNLGKALQQQGSHIAALECFQKVLSLAP 216
Query: 403 NCMSTR------------YAVAVSRIKDAERSQE 424
+ A++ +K+A + QE
Sbjct: 217 EFPGIHSDLAWSLMELADFPEAIAHLKEAIKGQE 250
>gi|296448615|ref|ZP_06890484.1| TPR repeat-containing protein [Methylosinus trichosporium OB3b]
gi|296253865|gb|EFH01023.1| TPR repeat-containing protein [Methylosinus trichosporium OB3b]
Length = 285
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 38/82 (46%)
Query: 248 AVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQD 307
A +NT G+ K G+ Q +I+ S + DPN+ N +A+ Q G +Q+ F
Sbjct: 73 AEAFNTRGVAHAKVGQFQEAIADFSQAIQSDPNSAAAFTNRALAFRQIGRSDQARLDFDR 132
Query: 308 LILKDQNHPAALINYAALLLCK 329
I NH A I A LL +
Sbjct: 133 AITVSPNHAPAYIGRANLLRAQ 154
>gi|387905576|ref|YP_006335914.1| TPR repeat containing protein [Burkholderia sp. KJ006]
gi|387580468|gb|AFJ89183.1| TPR repeat containing protein [Burkholderia sp. KJ006]
Length = 1213
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 48/95 (50%), Gaps = 9/95 (9%)
Query: 260 KSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAAL 319
+ G LQ + ++LLA DP++ + + LG+ FQ G ++ + + I + Q P AL
Sbjct: 505 RDGALQQAEHAYAALLAADPDHPEALHLLGVLRFQQGRLDDAEPLMRRSIER-QPAPLAL 563
Query: 320 INYAALLLCKYGSVLAGAGANTGEGACLDQASAVN 354
NY+A VLAG G A LD A A+N
Sbjct: 564 ANYSA--------VLAGLGRTHDALARLDDALAIN 590
Score = 42.4 bits (98), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 69/181 (38%), Gaps = 17/181 (9%)
Query: 252 NTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILK 311
T GL L + GR + + LA+ P + D + G+ + D E++ F I
Sbjct: 666 RTRGLALRELGRHRDAADSYDHALALAPGSADVLFLRGVVHLDLHDPERALTDFNAAIAT 725
Query: 312 DQNHPAALINYA-----------ALLLCKYGSVL----AGAGANTGEGACLDQASAVNVA 356
ALIN A ALL C L A A A G A Q A
Sbjct: 726 KPTFVDALINSAIALEQLGRHDEALLRCDRALALEPRHACALATRGNAAS--QLGRHTDA 783
Query: 357 KECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRI 416
+ AL ADP + + N A+A H + E+A +L+P C + A R+
Sbjct: 784 IDSYARALDADPLSTVVLCNFADALMRVDRHADAHALCERALELDPQCAPAWFTRARVRL 843
Query: 417 K 417
+
Sbjct: 844 E 844
>gi|338535852|ref|YP_004669186.1| hypothetical protein LILAB_31135 [Myxococcus fulvus HW-1]
gi|337261948|gb|AEI68108.1| TPR domain-containing protein [Myxococcus fulvus HW-1]
Length = 624
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 83/185 (44%), Gaps = 24/185 (12%)
Query: 219 NSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVD 278
+L++ P+ E +L +E + + A +++ L L + GR + ++++L +A
Sbjct: 402 RALERGGAPDRAERLL---REGLATSP-SAALYDALAATLHRQGRGKEALALLREAVARS 457
Query: 279 PNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAG 338
P + D + LG A+ + GD + + ++ +H AAL N+ G +LA AG
Sbjct: 458 PRDEDLLYVLGAAHERQGDAAGALARMRAVLAVAPDHAAAL-NF-------LGYLLAQAG 509
Query: 339 ANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAA 398
+ E A+ + AL+ P +L Y+ GD+ + LE+A+
Sbjct: 510 QDLDE------------AERRVRRALELRPDTGAYLDSLGWVYFRRGDYARAVDALERAS 557
Query: 399 KLEPN 403
L P+
Sbjct: 558 TLSPD 562
>gi|357419207|ref|YP_004932199.1| hypothetical protein Tlie_0365 [Thermovirga lienii DSM 17291]
gi|355396673|gb|AER66102.1| Tetratricopeptide TPR_1 repeat-containing protein [Thermovirga
lienii DSM 17291]
Length = 377
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 84/219 (38%), Gaps = 44/219 (20%)
Query: 163 LGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLD 222
LG +Y ++G+P KA S+ KA E RP+ L+ + + LL E
Sbjct: 102 LGNLYWKMGEPTKAEESFRKALE---------KRPDYLA-AWSNLGRLLLAEG------- 144
Query: 223 KELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNC 282
+++E L L+++ + LG G L+ +I L + P+
Sbjct: 145 ------KVQEALPALEKASELAPSNPENLYYLGEAKKALGNLEGAIEQYRKALELKPDYT 198
Query: 283 DCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTG 342
D L AY + G +++ + F++ I +D N+ L N+ +L
Sbjct: 199 DAEVALAFAYGRMGKVDKGVEIFKEAIARDPNNAKLLYNFGVMLFS-------------- 244
Query: 343 EGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAY 381
+ A + A K DP + +W NL+ Y
Sbjct: 245 -------TRQYSEAAQAFSKAGKLDPTSVEVWNNLSQTY 276
>gi|320352459|ref|YP_004193798.1| hypothetical protein Despr_0323 [Desulfobulbus propionicus DSM
2032]
gi|320120961|gb|ADW16507.1| Tetratricopeptide TPR_1 repeat-containing protein [Desulfobulbus
propionicus DSM 2032]
Length = 758
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 82/187 (43%), Gaps = 27/187 (14%)
Query: 152 KMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPE--LLSLVQIHHAQ 209
K+P N LGL Y + Q KA ++EK LL + D A+ LL L Q AQ
Sbjct: 469 KVPDNVEVLGSLGLTYLAMKQEAKAKQTFEK----LLAVQPDNAKAFSFLLQLAQKSGAQ 524
Query: 210 --CLL----------PESSGDNSLDKEL-----EPEELEEILSKLKESMQSDTRQAVVWN 252
L+ P+S+G L L +P++ E+ SK +E + D Q +
Sbjct: 525 KEALIKMTQAQIDKAPKSAGLQILLANLFLSAQQPDKALELYSKAQE-LDPDNPQPYAMS 583
Query: 253 TLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQD-LILK 311
LIL + G+ +I+ LLA PN LG Y Q+G + + + +Q L +K
Sbjct: 584 --ALILTRQGKTDQAIAEYRDLLAKQPNAIGAYMGLGSIYEQTGKTDLAKEAYQKALAVK 641
Query: 312 DQNHPAA 318
PAA
Sbjct: 642 PDFAPAA 648
Score = 42.0 bits (97), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 81/188 (43%), Gaps = 15/188 (7%)
Query: 231 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 290
+E + +L+ ++Q D + A LGL+ LKSG ++ + + L +DP N D
Sbjct: 49 KEAIIELRNAIQIDPKYADARYQLGLLYLKSGDVRQAFAELQRAATLDPKNLDAKIKTAE 108
Query: 291 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLC--KYGSVLAG-----AGANTGE 343
Y + E + K +++++ ++ AL A L L K+ + +A AGA +
Sbjct: 109 FYLLTKKKEDAQKHIDEVLVQAPDNKDALALQANLELVDGKFDAAIATVDKAIAGAPNED 168
Query: 344 ------GACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKC-LEK 396
G L A+ L AL+ D K A LA A+Y+ S K LEK
Sbjct: 169 RFYAIKGRALSAKQQFPAAENAFLKALELDGKKLANHATLA-AFYVERKELSKAKASLEK 227
Query: 397 AAKLEPNC 404
A P+
Sbjct: 228 MAAAFPDS 235
>gi|376004134|ref|ZP_09781892.1| putative tetratricopeptide repeats containing glycosyl transferase,
N-acetylglucosaminyl-transferase P110 family
[Arthrospira sp. PCC 8005]
gi|375327468|emb|CCE17645.1| putative tetratricopeptide repeats containing glycosyl transferase,
N-acetylglucosaminyl-transferase P110 family
[Arthrospira sp. PCC 8005]
Length = 1679
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 82/214 (38%), Gaps = 29/214 (13%)
Query: 238 KESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGD 297
K +++ A V LG +L K G ++ +I+ + PN + NLG+ QSG
Sbjct: 39 KRALEVYFPWAEVHYNLGFVLEKLGDVEDAIACYRQAIIHKPNYTNAYYNLGLILQQSGR 98
Query: 298 MEQSAKCFQDLILKDQNHPAALINYAALLLCK--YGSVLAGAGA-------------NTG 342
++ +Q I + P N +L+ + Y + L GA N G
Sbjct: 99 EIEAIAAYQSAIYLEPETPMPYSNLGGILVGRGEYQTALEILGAALKKWPQTASLHNNLG 158
Query: 343 EGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 402
Q +A L A++ P +A I NL A G H ++ +C +K L P
Sbjct: 159 RSLLGKQDGDRAIA--AFLKAVQLQPDSAIIQHNLGKALQQQGSHIAALECFQKVLSLAP 216
Query: 403 NCMSTR------------YAVAVSRIKDAERSQE 424
+ A++ +K+A + QE
Sbjct: 217 EFPGIHSDLAWSLMELADFPEAIAHLKEAIKGQE 250
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 59/270 (21%), Positives = 112/270 (41%), Gaps = 26/270 (9%)
Query: 162 LLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIAR---PELLSLVQIHHAQCLLPESSGD 218
LLG ++Q+ G + Y++A+ + R E+ + R P+ S Q PE
Sbjct: 853 LLGKVWQQRGDEYWSRYWYQRAQALGYR-ESVVERKDPPQPESPTQGKPEIPQAPEEPPS 911
Query: 219 N---SLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLL 275
+ ++ L+ ++ ++ LS ++++ D A ++ LG LL RL +++ +
Sbjct: 912 DMVAQVEANLQEKQFQQALSLCQQALALDPEAANIYPLLGKALLGLKRLSEAVAAFEKAV 971
Query: 276 AVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAAL---------- 325
++P + NLG Y Q EQ+ KC++ I N AA N +
Sbjct: 972 QLNPADATIHTNLGSLYAQMQRWEQAVKCYERAIALQPNLVAAHRNLGKVWQKLGQPQQA 1031
Query: 326 LLCKYGSVLAGAGANTGE-------GACLDQASAVNVAKECLLAALKADPKAAHIWANLA 378
L C+Y +++ + GE G L Q + A+ C ++ P + + NL
Sbjct: 1032 LSCRYQALI--LQPDQGEVSEFLAVGNSLLQGGRLQEAEVCYRQVVRRSPHDSQAYHNLG 1089
Query: 379 NAYYLTGDHRSSGKCLEKAAKLEPNCMSTR 408
G + +A +L+P+ +R
Sbjct: 1090 EVLSAQGLWSQAEAAYRRAVELQPDSFESR 1119
>gi|116623761|ref|YP_825917.1| hypothetical protein Acid_4673 [Candidatus Solibacter usitatus
Ellin6076]
gi|116226923|gb|ABJ85632.1| Tetratricopeptide TPR_2 repeat protein [Candidatus Solibacter
usitatus Ellin6076]
Length = 775
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 78/191 (40%), Gaps = 19/191 (9%)
Query: 135 REEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADI 194
R++K L L K + A G YQR+G+ +A++ Y+K L +
Sbjct: 259 RQKKAPELDALLRDFVAKFQQYPKAPMDAGDFYQRIGKLEQAIALYQKG----LESDRTN 314
Query: 195 ARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTL 254
+ L +V + Q E++ ++ IL++ + + +A + T
Sbjct: 315 RKDYLKRIVDVRMQQSRFDEATA-----------TVDSILTEFPGDLDAIASRAALRMTT 363
Query: 255 GLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQN 314
G K +Q + +LL DP N + NL A Q+GD Q+ +++ +D N
Sbjct: 364 G----KPTEIQRARDEFGALLKRDPQNNELRFNLARASRQAGDETQARSALVEILRRDPN 419
Query: 315 HPAALINYAAL 325
H AL A L
Sbjct: 420 HRNALRELADL 430
>gi|338811928|ref|ZP_08624129.1| TPR repeat-containing protein [Acetonema longum DSM 6540]
gi|337276073|gb|EGO64509.1| TPR repeat-containing protein [Acetonema longum DSM 6540]
Length = 298
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 63/164 (38%), Gaps = 21/164 (12%)
Query: 251 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 310
W + G + + G +++ + +A++P N + N GIAY GD + + + I
Sbjct: 113 WRSRGDVYAEKGDYDKAVTDYTQFIALEPQNAEAHNNRGIAYSDKGDYDTAITDYTRAI- 171
Query: 311 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 370
L KY A A G + A + A+ +P+
Sbjct: 172 --------------ALQPKY------ATAYYNRGIAYKNKGDYDKAIDDYSQAIALNPRD 211
Query: 371 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVS 414
A + N ANAY + GD+ + A L+P+ Y A++
Sbjct: 212 ASAYNNRANAYVMKGDYDKAITDYSLATTLDPDYAVAYYNQALA 255
>gi|294674663|ref|YP_003575279.1| hypothetical protein PRU_2004 [Prevotella ruminicola 23]
gi|294471998|gb|ADE81387.1| tetratricopeptide repeat protein [Prevotella ruminicola 23]
Length = 681
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 67/157 (42%), Gaps = 24/157 (15%)
Query: 123 GDQSGLGTSSSSREEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEK 182
GDQ + ++ + LKT LV + K P + + LG++Y R G KA+ Y+K
Sbjct: 232 GDQKAYYLMQNIVDDAFALLKTKLVIQSNKNPNDQAWPYYLGVVYDRKGATKKAIEYYKK 291
Query: 183 AEEILLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQ 242
A EI S++ A C ES G+ L L+ L++++Q
Sbjct: 292 AAEI-----------NTTSVIFRSIAVCY--ESIGEYDL-----------ALTYLEKTLQ 327
Query: 243 SDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDP 279
D + T + +SGR+ +I V+ ++ P
Sbjct: 328 MDPKDVRAQATKADVYYESGRVDDAIRVMDDIINSYP 364
>gi|254413330|ref|ZP_05027101.1| tetratricopeptide repeat domain protein [Coleofasciculus
chthonoplastes PCC 7420]
gi|196179950|gb|EDX74943.1| tetratricopeptide repeat domain protein [Coleofasciculus
chthonoplastes PCC 7420]
Length = 1015
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 41/196 (20%), Positives = 77/196 (39%), Gaps = 25/196 (12%)
Query: 228 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 287
++ + LS L +S+ D + +LGL+L K G + +I + ++P + N
Sbjct: 303 QQYQNCLSHLLQSLAIDPASGLHHYSLGLVLEKIGNIPQAIEAYQKSIQLNPKLINAYNN 362
Query: 288 LGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL 347
LG+ Q+ + + ++ + + +H + IN LL L
Sbjct: 363 LGVILCQTDQFQDAEYVYRQAVTANPSHFGSYINLGNLL--------------------L 402
Query: 348 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 407
+Q ++ A E AL+ P+ + NL AY L D S A + N
Sbjct: 403 EQHRNIDEAIELYQKALQLKPRDPDVMQNLGIAYDLKHDPAKSAFYFGNYAHIRQN---- 458
Query: 408 RYAVAVSRIKDAERSQ 423
Y A+ + + ++Q
Sbjct: 459 -YEAAIEQYEKGLKTQ 473
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 54/252 (21%), Positives = 105/252 (41%), Gaps = 30/252 (11%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 213
P + H+ LGL+ +++G +A+ +Y+K+ ++ P+L++
Sbjct: 320 PASGLHHYSLGLVLEKIGNIPQAIEAYQKSIQL---------NPKLIN------------ 358
Query: 214 ESSGDNSLDKEL-EPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGR-LQSSISVL 271
N+L L + ++ ++ ++++ ++ + LG +LL+ R + +I +
Sbjct: 359 ---AYNNLGVILCQTDQFQDAEYVYRQAVTANPSHFGSYINLGNLLLEQHRNIDEAIELY 415
Query: 272 SSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYG 331
L + P + D + NLGIAY D +SA F + QN+ AA+ Y L + G
Sbjct: 416 QKALQLKPRDPDVMQNLGIAYDLKHDPAKSAFYFGNYAHIRQNYEAAIEQYEKGLKTQIG 475
Query: 332 SVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSG 391
+ C ++ + A LK PK ++ L A G +
Sbjct: 476 K----SSIYINLADCYEKLNQEEKAINTYHEGLKHYPKTPRLYFCLIVALQNFGRIHEAI 531
Query: 392 KCLEKAAKLEPN 403
+AA+L PN
Sbjct: 532 TVASQAAQLLPN 543
>gi|109474510|ref|XP_001075561.1| PREDICTED: transmembrane and TPR repeat-containing protein 1-like
[Rattus norvegicus]
Length = 942
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 75/338 (22%), Positives = 139/338 (41%), Gaps = 54/338 (15%)
Query: 228 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 287
E+ EE + LKES++ A +++L +L + R + + V + + P++ D N
Sbjct: 622 EKTEEAIVLLKESIKYGPDFADAYSSLASLLAEQERFKEAEDVYQAGIKNCPDSSDLHNN 681
Query: 288 LGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL 347
+ SG E++ +Q I +H A++N G + G N+
Sbjct: 682 YAVFLVDSGFPEKAVAHYQQAIQLSPSHHVAVVNL--------GRLHRSLGENS------ 727
Query: 348 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 407
+A+E AL+ + A + + L YY TG H+ + + +A L+P+
Sbjct: 728 -------MAEEWYRRALQVA-RTAEVLSPLGALYYNTGRHKEALEVYREAVSLQPSQRDL 779
Query: 408 RYAVA-----VSRIKDAERSQEPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFAAV-- 460
R A+A + + K+AE+ + S + +P +E + +A+
Sbjct: 780 RLALAQVLAVMGQTKEAEK--------------ITSHIVSEEPRCLE---CYRLLSAIYS 822
Query: 461 QKTHHEVAAAFETEENELS-KMEECAGAGESAF-----LDQASAVNVAKECLLAALKADP 514
++ HHE A E E L K ++ E F L + + ++ A E AA+ DP
Sbjct: 823 KQEHHE--KALEAIEKALQLKPKDPKVISELFFTKGNQLREQNLLDKAFESYEAAVTLDP 880
Query: 515 KAAHIWANLANAYYLTGDHRSSGKCLEKVLMVYCSSNL 552
A W N+ ++ G + + E+ L + S L
Sbjct: 881 DQAQAWMNMGGIRHIQGSYVPARVYYERALRLVPESKL 918
>gi|51892857|ref|YP_075548.1| hypothetical protein STH1719 [Symbiobacterium thermophilum IAM
14863]
gi|51856546|dbj|BAD40704.1| conserved hypothetical protein [Symbiobacterium thermophilum IAM
14863]
Length = 422
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 75/199 (37%), Gaps = 23/199 (11%)
Query: 232 EILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIA 291
E L L +++ + N +G LL++GR + +I A++P++ +GNL A
Sbjct: 241 EALRALLRAVRLRPSDPTLLNNVGYTLLRAGRTREAIESYRQASALEPDSPLTLGNLAAA 300
Query: 292 YFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQAS 351
F+ G M ++ + K P L N LLL +A
Sbjct: 301 LFEGGMMAEATALLDAALQKAPGDPTLLNNKGHLLL---------------------KAG 339
Query: 352 AVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAV 411
A C ALK P AN A Y+ G + + A EP+ +++
Sbjct: 340 QYREALACFEEALKRAPDDPAALANQAACYFALGRYEQALNAYRLAVATEPHNKQYLWSI 399
Query: 412 A--VSRIKDAERSQEPTEQ 428
+ R+ AE + + Q
Sbjct: 400 GACLERLGRAEEALQTYNQ 418
>gi|427714622|ref|YP_007063246.1| hypothetical protein Syn6312_3691 [Synechococcus sp. PCC 6312]
gi|427378751|gb|AFY62703.1| TPR repeat-containing protein [Synechococcus sp. PCC 6312]
Length = 943
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 71/176 (40%), Gaps = 21/176 (11%)
Query: 228 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 287
E+ + + + +Q +N LG L +S + +I +A+ PNN N
Sbjct: 57 EKYPDAIQHYQRVIQLQPDNPTAYNDLGNALQRSKNILQAIPCYQKAIALKPNNAQAYSN 116
Query: 288 LGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL 347
LG+AY G E++ ++ I + +P N G + L
Sbjct: 117 LGVAYQDLGRYEEAQAAYRQGIQVEPTYPHTYYN---------------LGKSFQSQDRL 161
Query: 348 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 403
++ A+ + C ++ DP A + N+ A+Y G S + EKA +++P+
Sbjct: 162 EE--AILTYQRC----IQIDPSYAMAYNNMGLAFYDLGQVEPSLRAYEKALEIDPS 211
>gi|15618603|ref|NP_224889.1| hypothetical protein CPn0693 [Chlamydophila pneumoniae CWL029]
gi|15836225|ref|NP_300749.1| hypothetical protein CPj0693 [Chlamydophila pneumoniae J138]
gi|16752347|ref|NP_444605.1| type III secretion chaperone [Chlamydophila pneumoniae AR39]
gi|33242051|ref|NP_876992.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
[Chlamydophila pneumoniae TW-183]
gi|4376995|gb|AAD18832.1| TPR Repeats-CT683 hypothetical protein [Chlamydophila pneumoniae
CWL029]
gi|8163354|gb|AAF73621.1| type III secretion chaperone, putative [Chlamydophila pneumoniae
AR39]
gi|8979065|dbj|BAA98900.1| TPR repeats-CT683 hypothetical protein [Chlamydophila pneumoniae
J138]
gi|33236561|gb|AAP98649.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
[Chlamydophila pneumoniae TW-183]
Length = 339
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/132 (21%), Positives = 61/132 (46%), Gaps = 34/132 (25%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRL------------------------ 264
E E+ +LKE+++ D+ A+ + LG+I L++GR+
Sbjct: 24 EYEQAEKRLKETLELDSTAALAYCYLGIIALETGRVSEALNWCSKGLASEPGDSYLRYCY 83
Query: 265 ----------QSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQN 314
+++I S+ +A+ P++ +C +LG Y + ++++ CF ++ D
Sbjct: 84 GVALDRGNQYEAAIEQYSAYVALHPDDVECWFSLGSVYHRLKRLQEALDCFDKILALDPW 143
Query: 315 HPAALINYAALL 326
+P +L N A +L
Sbjct: 144 NPQSLYNKAVIL 155
>gi|403235941|ref|ZP_10914527.1| hypothetical protein B1040_09227 [Bacillus sp. 10403023]
Length = 496
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 39/72 (54%)
Query: 258 LLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPA 317
L++GRL ++++L ++ P NL +AYF SGD+E ++K +++ K+ +
Sbjct: 164 FLETGRLDEAVTLLKEIIREYPEFWSAYNNLALAYFYSGDVENASKILDEVLSKNPGNLH 223
Query: 318 ALINYAALLLCK 329
AL N L +
Sbjct: 224 ALCNSLVFLYYQ 235
>gi|291296105|ref|YP_003507503.1| hypothetical protein [Meiothermus ruber DSM 1279]
gi|290471064|gb|ADD28483.1| Tetratricopeptide TPR_2 repeat protein [Meiothermus ruber DSM 1279]
Length = 354
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 44/205 (21%), Positives = 89/205 (43%), Gaps = 33/205 (16%)
Query: 200 LSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILL 259
++L Q++ Q LL E ++E L++ LS L+E+ + + + A ++ T G +L
Sbjct: 99 VALAQVYVRQYLLSE-------NREASKGLLDQALSVLREAERVNAKYAPIYATRGTVLA 151
Query: 260 KSGRLQSSISVLSSLLAV--DPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPA 317
+L ++ ++ LA+ +P + ++ Y + G +++ K + + + +P+
Sbjct: 152 YQNKLDQAVESINRSLALKDEPVVRALLADI---YIRQGKWDEALKHYDEAVKAAPKNPS 208
Query: 318 ALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANL 377
I Y +LLL + V++A E L A+ P A W
Sbjct: 209 LRIKYGSLLLLR---------------------GNVDLAIEHLDQAVILSPGNAEAWLRR 247
Query: 378 ANAYYLTGDHRSSGKCLEKAAKLEP 402
+AYY D + +G ++ L P
Sbjct: 248 GDAYYEKKDWQQAGVSYQQTVALSP 272
>gi|158334579|ref|YP_001515751.1| hypothetical protein AM1_1406 [Acaryochloris marina MBIC11017]
gi|158304820|gb|ABW26437.1| TPR domain protein [Acaryochloris marina MBIC11017]
Length = 783
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 41/189 (21%), Positives = 78/189 (41%), Gaps = 23/189 (12%)
Query: 153 MPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLL 212
+P A+F G Y++ G+ +A+ Y +A I C ++ ++ +
Sbjct: 94 LPDYDEAYFQRGNSYRQRGEFQRAIQDYSQAIRINPYC------------IKAYYKRA-- 139
Query: 213 PESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLS 272
D E + L+ + + + A + G+ L +SG L+ +I +
Sbjct: 140 ---------DSRAELGDHPGALTDFSQVILRLPKDANAYCQRGIFLSQSGELEKAIEDFT 190
Query: 273 SLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGS 332
S + +P D + G Q G+ E+++K F + +L D NH AA AL + K
Sbjct: 191 SAIEHNPRLADAYFHRGYCLAQMGEAEKASKDFSEALLHDPNHQAAYTRAYALGMLKETP 250
Query: 333 VLAGAGANT 341
V + ++T
Sbjct: 251 VDVSSPSST 259
>gi|125975162|ref|YP_001039072.1| peptidase S41 [Clostridium thermocellum ATCC 27405]
gi|256003175|ref|ZP_05428167.1| peptidase S41 [Clostridium thermocellum DSM 2360]
gi|281418417|ref|ZP_06249436.1| peptidase S41 [Clostridium thermocellum JW20]
gi|385777647|ref|YP_005686812.1| peptidase S41 [Clostridium thermocellum DSM 1313]
gi|419722800|ref|ZP_14249937.1| peptidase S41 [Clostridium thermocellum AD2]
gi|419726301|ref|ZP_14253324.1| peptidase S41 [Clostridium thermocellum YS]
gi|125715387|gb|ABN53879.1| peptidase S41 [Clostridium thermocellum ATCC 27405]
gi|255992866|gb|EEU02956.1| peptidase S41 [Clostridium thermocellum DSM 2360]
gi|281407501|gb|EFB37760.1| peptidase S41 [Clostridium thermocellum JW20]
gi|316939327|gb|ADU73361.1| peptidase S41 [Clostridium thermocellum DSM 1313]
gi|380770353|gb|EIC04250.1| peptidase S41 [Clostridium thermocellum YS]
gi|380781180|gb|EIC10841.1| peptidase S41 [Clostridium thermocellum AD2]
Length = 745
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 107/264 (40%), Gaps = 46/264 (17%)
Query: 156 NAHAHFLLGLMYQRLGQPLKAVSSYEKAEEI---LLRCE-------ADIARPELLSLVQI 205
NA A+ GL LG+ +A+ ++KA EI L + A + R E SL
Sbjct: 59 NAMAYLGKGLALDALGKYEEALEFFDKAIEINKDLAKAYNAKGTTLASLERYE-ESLENF 117
Query: 206 HHAQCLLPESS--------GDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLI 257
A L P++S G N+L + EE + +++++ + R V ++ G
Sbjct: 118 KKAAELKPKNSAYQNDVAYGLNNLGR------FEEAIQYAEKALKLNPRSGVAYSNKGFA 171
Query: 258 LLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPA 317
L G+L +I + + P + N IA F+ G E++ + ++ D +
Sbjct: 172 LDALGKLDEAIECYDKAIELSPTYTNAYYNKSIAVFKMGKTEEAIELLDKVLEIDPDDLD 231
Query: 318 ALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANL 377
A+ T +G CL++ A EC A++ PK + +
Sbjct: 232 AI---------------------TSKGYCLNELGKYEKAIECFDTAIEKYPKDPYPYVCK 270
Query: 378 ANAYYLTGDHRSSGKCLEKAAKLE 401
A + Y G + ++ + KA KLE
Sbjct: 271 ATSLYYLGKYDNALEECNKAIKLE 294
>gi|297477542|ref|XP_002689441.1| PREDICTED: tetratricopeptide repeat protein 37 [Bos taurus]
gi|296485034|tpg|DAA27149.1| TPA: tetratricopeptide repeat domain 37 [Bos taurus]
Length = 1563
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 2/92 (2%)
Query: 216 SGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTL--GLILLKSGRLQSSISVLSS 273
SG ++D +E EE+E L+ L Q + W L GL LK+G+ +++ L +
Sbjct: 530 SGAAAVDLSVELEEMETALAILTTVTQKASAGTAKWAWLRRGLYYLKAGQHSQAVADLQA 589
Query: 274 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCF 305
L DP + +C +LG AY G + K F
Sbjct: 590 ALRADPKDFNCWESLGEAYLSRGGYTTALKSF 621
>gi|410671866|ref|YP_006924237.1| hypothetical protein Mpsy_2668 [Methanolobus psychrophilus R15]
gi|409170994|gb|AFV24869.1| hypothetical protein Mpsy_2668 [Methanolobus psychrophilus R15]
Length = 368
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 55/300 (18%), Positives = 111/300 (37%), Gaps = 46/300 (15%)
Query: 258 LLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPA 317
L +S +I+ + ++ DP D + G + + ++ C+ ++I D +
Sbjct: 34 LYRSNMYYEAIASVDNIQVDDPYYIDALNYKGESLYALSRYNEAIGCYNEVIEMDPENSK 93
Query: 318 ALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANL 377
A +N LL Y D+A A C A++ADP+ W+
Sbjct: 94 AWVNKGDSLLEIYE---------------YDEADA------CYGRAIEADPEFDEAWSGK 132
Query: 378 ANAYYLTGDHRSSGKCLEKAAKL-------EPNCMSTRYAVAVSRIKDAERSQEPTEQLS 430
YL G + S + EK+ + +P+ Y +S S
Sbjct: 133 GITLYLNGSYNESAEFFEKSIEYSDKKITSDPDSFEAWYNKGIS--------------FS 178
Query: 431 WAGNEMASILREGDPVQIEPPIA--W--AGFAAVQKTHHEVAAAFETEENELSKMEECAG 486
+ G S+ +++ P A W G+ ++ ++ A E++ + A
Sbjct: 179 YIGRTNESLECYEKAIELNPEYANAWRGKGYELIELGRYDEAIQCYDNAIEINPEDAYAW 238
Query: 487 AGESAFLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKVLMV 546
G+ L + + A +C A++ P+ A+ W N + + + +C +KV+ +
Sbjct: 239 VGKGYVLYKFDRYDEAIKCFDKAIEIHPEDAYAWGNKGYMLGILERYDEAIECYDKVIEI 298
Score = 42.0 bits (97), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 39/191 (20%), Positives = 75/191 (39%), Gaps = 28/191 (14%)
Query: 219 NSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGR-------LQSSISVL 271
N D LE E +E + ++++D W+ G+ L +G + SI
Sbjct: 97 NKGDSLLEIYEYDEADACYGRAIEADPEFDEAWSGKGITLYLNGSYNESAEFFEKSIEYS 156
Query: 272 SSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYG 331
+ DP++ + N GI++ G +S +C++ I + +
Sbjct: 157 DKKITSDPDSFEAWYNKGISFSYIGRTNESLECYEKAIELNPEY---------------- 200
Query: 332 SVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSG 391
A A G+G L + + A +C A++ +P+ A+ W Y + +
Sbjct: 201 -----ANAWRGKGYELIELGRYDEAIQCYDNAIEINPEDAYAWVGKGYVLYKFDRYDEAI 255
Query: 392 KCLEKAAKLEP 402
KC +KA ++ P
Sbjct: 256 KCFDKAIEIHP 266
Score = 39.3 bits (90), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 33/171 (19%), Positives = 64/171 (37%), Gaps = 21/171 (12%)
Query: 232 EILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIA 291
E L +++++ + A W G L++ GR +I + + ++P + G
Sbjct: 185 ESLECYEKAIELNPEYANAWRGKGYELIELGRYDEAIQCYDNAIEINPEDAYAWVGKGYV 244
Query: 292 YFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQAS 351
++ +++ KCF I + HP A A +G L
Sbjct: 245 LYKFDRYDEAIKCFDKAI---EIHPE------------------DAYAWGNKGYMLGILE 283
Query: 352 AVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 402
+ A EC ++ DP+ W A Y G + + +C + A ++ P
Sbjct: 284 RYDEAIECYDKVIEIDPEFTSAWKEKGYALYKLGRYDEAIQCYDNAIEINP 334
>gi|392413291|ref|YP_006449898.1| cytochrome c biogenesis factor [Desulfomonile tiedjei DSM 6799]
gi|390626427|gb|AFM27634.1| cytochrome c biogenesis factor [Desulfomonile tiedjei DSM 6799]
Length = 195
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 46/98 (46%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
EL+ +S L++ + A V LG G + ++ L V+P N D ++
Sbjct: 51 ELKARISGLEKMLAVRPNDADVLVQLGNDYFDLGNHEKAVDYYRRSLEVNPGNADVWTDM 110
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL 326
GI+ + G ++SA F+ + D NHP AL N +L
Sbjct: 111 GISLRKLGKPQESADAFRKALEVDPNHPMALFNLGIIL 148
>gi|386391181|ref|ZP_10075962.1| cytochrome c biogenesis factor [Desulfovibrio sp. U5L]
gi|385732059|gb|EIG52257.1| cytochrome c biogenesis factor [Desulfovibrio sp. U5L]
Length = 206
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 41/90 (45%)
Query: 237 LKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSG 296
L++ Q + A W LG + + + +I+ L +DP D + + G+ Y Q G
Sbjct: 74 LEKQTQLEPANAAAWTELGNLYFDTEQPDKAITAYEKALTLDPKQPDVLTDQGVMYRQVG 133
Query: 297 DMEQSAKCFQDLILKDQNHPAALINYAALL 326
+++ +CF I + H A N + +L
Sbjct: 134 KFDKALECFNKAIAINPGHIIAQFNKSVVL 163
>gi|225850059|ref|YP_002730293.1| hypothetical protein PERMA_0503 [Persephonella marina EX-H1]
gi|225646356|gb|ACO04542.1| tetratricopeptide repeat domain protein [Persephonella marina
EX-H1]
Length = 559
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 38/186 (20%), Positives = 76/186 (40%), Gaps = 13/186 (6%)
Query: 231 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 290
EE + LK++++ + + LG + L+ + + + V +L DPN+ + + L
Sbjct: 181 EEAIKHLKKALEIEPLYQPAYVLLGELYLQDRKFKEAEKVYLKVLEKDPNDLEALNRLFQ 240
Query: 291 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCK-YGSVLAGAGANTGE------ 343
Y Q+ +++ + ++ D ++ AL+ L L + G + +
Sbjct: 241 VYVQADQFKKAEEIINRIVKIDPSNKDALLKKFLLYLRENKGEEIIRELEELAKEEPDNP 300
Query: 344 ------GACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKA 397
G + A A+E L LK +P+ + I LA Y TG + + L +
Sbjct: 301 TVLSILGMAYESAQRYKKAEEIYLKVLKLEPENSEILERLAEVYTRTGQYEKALDVLNRL 360
Query: 398 AKLEPN 403
L+P
Sbjct: 361 YSLDPR 366
>gi|399020435|ref|ZP_10722565.1| putative methyltransferase (contains TPR repeat) [Herbaspirillum
sp. CF444]
gi|398094850|gb|EJL85204.1| putative methyltransferase (contains TPR repeat) [Herbaspirillum
sp. CF444]
Length = 445
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 56/128 (43%), Gaps = 15/128 (11%)
Query: 290 IAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAG------------- 336
I + +GD+E++ K ++D++ +D HP AL +Y + L + G G
Sbjct: 22 IGFHTAGDLEKAEKIYRDVLARDPVHPIAL-HYLGIFLYQNGQDEEGVQNIRLSCALQPE 80
Query: 337 -AGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLE 395
A + G L A E AAL ADP +W NL ++ GD + + +
Sbjct: 81 NASWHNDLGNVLFALREFEEASEAYQAALDADPGDHIVWNNLGSSQLQHGDTEDAIQSFK 140
Query: 396 KAAKLEPN 403
+ +L P+
Sbjct: 141 QTLELAPD 148
>gi|209524105|ref|ZP_03272656.1| Tetratricopeptide TPR_2 repeat protein [Arthrospira maxima CS-328]
gi|209495480|gb|EDZ95784.1| Tetratricopeptide TPR_2 repeat protein [Arthrospira maxima CS-328]
Length = 1676
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 82/214 (38%), Gaps = 29/214 (13%)
Query: 238 KESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGD 297
K +++ A V LG +L K G ++ +I+ + PN + NLG+ QSG
Sbjct: 39 KRALEVYFPWAEVHYNLGFVLEKLGDVEDAIACYRQAIIHKPNYTNAYYNLGLILQQSGR 98
Query: 298 MEQSAKCFQDLILKDQNHPAALINYAALLLCK--YGSVLAGAGA-------------NTG 342
++ +Q I + P N +L+ + Y + L GA N G
Sbjct: 99 EIEAIAAYQSAIYLEPETPMPYSNLGGILVGRGEYQTALEILGAALKKWPQTASLHNNLG 158
Query: 343 EGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 402
Q +A L A++ P +A I NL A G H ++ +C +K L P
Sbjct: 159 RSLLGKQDGDRAIA--AFLKAVQLQPDSAIIQHNLGKALQQQGSHIAALECFQKVLSLAP 216
Query: 403 NCMSTR------------YAVAVSRIKDAERSQE 424
+ A++ +K+A + QE
Sbjct: 217 EFPGIHSDLAWSLMELADFPEAIAHLKEAIKGQE 250
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 110/268 (41%), Gaps = 22/268 (8%)
Query: 162 LLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIAR---PELLSLVQIHHAQCLLPESSGD 218
LLG ++Q+ G + Y++A+ + R E+ + R P+ S Q PE
Sbjct: 853 LLGKVWQQRGDEYWSRYWYQRAQALGYR-ESVVERKDPPQPESPTQGKPEIPQAPEEPPS 911
Query: 219 N---SLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLL 275
+ ++ L+ ++ ++ LS ++++ D A ++ LG LL RL +++ +
Sbjct: 912 DMVAQVEANLQEKQFQQALSLCQQALALDPEAANIYPLLGKALLGLKRLSEAVAAFEKAV 971
Query: 276 AVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAAL---------- 325
++P + NLG Y Q EQ+ KC++ I N AA N +
Sbjct: 972 QLNPADATIHTNLGSLYAQMQRWEQAVKCYERAIALQPNLVAAHRNLGKVWQKLGQPQQA 1031
Query: 326 LLCKYGSVL-----AGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANA 380
L C+Y +++ A G L Q + A+ C ++ P + + NL
Sbjct: 1032 LSCRYQALILQPDQGEASEFLAVGNSLLQGGRLQEAEVCYRQVVRRSPHDSQAYHNLGEV 1091
Query: 381 YYLTGDHRSSGKCLEKAAKLEPNCMSTR 408
G + +A +L+P+ +R
Sbjct: 1092 LSAQGLWSQAEAAYRRAVELQPDSFESR 1119
>gi|254410536|ref|ZP_05024315.1| Tetratricopeptide repeat family [Coleofasciculus chthonoplastes PCC
7420]
gi|196182742|gb|EDX77727.1| Tetratricopeptide repeat family [Coleofasciculus chthonoplastes PCC
7420]
Length = 1491
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 61/283 (21%), Positives = 110/283 (38%), Gaps = 48/283 (16%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEAD--------------IARPEL 199
P + HA F LG+ LG+ +A++S+++ ++ + D + R E
Sbjct: 343 PDDYHAWFKLGVALGELGRNEEALASFDQ----VISLQPDYYPAWDNRGAALFKLGRYEE 398
Query: 200 LSLVQIHHAQCLLPE--SSGDNSLDKELEPEELEEILSKLKE--SMQSDTRQAVVWNTLG 255
+L L P+ + DN + EE L+ + S+Q D A W+ G
Sbjct: 399 -ALANFDQVISLQPDYYPAWDNRGAALFKLGRYEEALANFDQVISLQPDYYPA--WDNRG 455
Query: 256 LILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLI-LKDQN 314
L K GR + +++ ++++ P++ G+A + G E++ F +I L+
Sbjct: 456 AALFKLGRNEEALASFDQVISLQPDDYHAWFKRGVALGELGRNEEALASFDQVISLQPDY 515
Query: 315 HPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIW 374
+PA G VL G N A DQA ++ P + W
Sbjct: 516 YPA---------WDNRGVVLFELGRNEEALANFDQAISLQ-------------PDYSSAW 553
Query: 375 ANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIK 417
N A + G H + ++A L+P+ + V+ K
Sbjct: 554 NNRGAALFKLGRHEEALTNFDQAISLQPDDYHAWFKRGVALFK 596
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 41/197 (20%), Positives = 77/197 (39%), Gaps = 13/197 (6%)
Query: 231 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 290
EE L+ +++ + WN G++L K GR + +++ ++++ P++ LG+
Sbjct: 295 EEALANFDQAISLQPDDSSAWNNRGVVLFKLGRNEEALASFDQVISLQPDDYHAWFKLGV 354
Query: 291 AYFQSGDMEQSAKCFQDLI-LKDQNHPAALINYAALL-LCKYGSVLAGAG---------- 338
A + G E++ F +I L+ +PA AAL L +Y LA
Sbjct: 355 ALGELGRNEEALASFDQVISLQPDYYPAWDNRGAALFKLGRYEEALANFDQVISLQPDYY 414
Query: 339 -ANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKA 397
A GA L + A + P W N A + G + + ++
Sbjct: 415 PAWDNRGAALFKLGRYEEALANFDQVISLQPDYYPAWDNRGAALFKLGRNEEALASFDQV 474
Query: 398 AKLEPNCMSTRYAVAVS 414
L+P+ + V+
Sbjct: 475 ISLQPDDYHAWFKRGVA 491
>gi|194668362|ref|XP_613739.4| PREDICTED: tetratricopeptide repeat protein 37 [Bos taurus]
Length = 1545
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 2/92 (2%)
Query: 216 SGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTL--GLILLKSGRLQSSISVLSS 273
SG ++D +E EE+E L+ L Q + W L GL LK+G+ +++ L +
Sbjct: 530 SGAAAVDLSVELEEMETALAILTTVTQKASAGTAKWAWLRRGLYYLKAGQHSQAVADLQA 589
Query: 274 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCF 305
L DP + +C +LG AY G + K F
Sbjct: 590 ALRADPKDFNCWESLGEAYLSRGGYTTALKSF 621
>gi|320102705|ref|YP_004178296.1| hypothetical protein Isop_1160 [Isosphaera pallida ATCC 43644]
gi|319749987|gb|ADV61747.1| Tetratricopeptide TPR_1 repeat-containing protein [Isosphaera
pallida ATCC 43644]
Length = 652
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 37/177 (20%), Positives = 67/177 (37%), Gaps = 21/177 (11%)
Query: 232 EILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIA 291
E+++ ++E +Q + W LG L +G L +I + A+ P++ NLG A
Sbjct: 89 EVVALMEEGLQGQPQCVEFWVALGNALQDAGLLPRAIDAFTHAHALRPDDPLIAYNLGNA 148
Query: 292 YFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQAS 351
+ + G +++ C++ + + + P A N G L +
Sbjct: 149 WLRRGRHDRAEACYRASLDLNPDQPLAWCNL---------------------GTALQEQG 187
Query: 352 AVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTR 408
A A+ P A NL NA G H + +A +L P+ + R
Sbjct: 188 QFEAALAAFTEAIDRAPDYADARYNLGNALQELGRHVEAETAYRRALELRPDFLEAR 244
>gi|297624941|ref|YP_003706375.1| hypothetical protein [Truepera radiovictrix DSM 17093]
gi|297166121|gb|ADI15832.1| Tetratricopeptide TPR_2 repeat protein [Truepera radiovictrix DSM
17093]
Length = 558
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 84/205 (40%), Gaps = 31/205 (15%)
Query: 152 KMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARP---ELLSLVQIHHA 208
+ P + A + LGL Y GQP +A+ E A + LR + + AR E+ + +
Sbjct: 329 RAPDSGEALYNLGLSYLESGQPDRALEPLEGALMLQLRAQGEGARAAQGEVYLALAAAYE 388
Query: 209 QCLLPESSGDNS-------------------LDKELEP-EELEEILSKLKESMQSDTR-- 246
Q P + ++ L + L E L L+E +D R
Sbjct: 389 QLGRPNEARRSAEAAASRLADAALRLEASAILGRSLYALGEFRGALLALREV--ADARPE 446
Query: 247 --QAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKC 304
A +W GL + G +++I+ +A+DPN + NLG AY +G E +A
Sbjct: 447 DANAQLWA--GLAHYQRGEFEAAIARYERAVALDPNGAEARLNLGAAYLAAGRYEDAALV 504
Query: 305 FQDLILKDQNHPAALINYAALLLCK 329
++ L + + P A N LL +
Sbjct: 505 YELLTTQFREDPDAFYNLGWALLSQ 529
>gi|224145202|ref|XP_002325562.1| predicted protein [Populus trichocarpa]
gi|222862437|gb|EEE99943.1| predicted protein [Populus trichocarpa]
Length = 221
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 65/143 (45%), Gaps = 1/143 (0%)
Query: 176 AVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILS 235
V ++ ++L R E D++ EL ++ L E G L ++ P + +L
Sbjct: 56 GVGTFFVIRQVLTRRELDLSAKELQAIRSGDATATGLFEL-GAVMLRRKFYPAATKYLLQ 114
Query: 236 KLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQS 295
+++ D A V+N LG+ + G+L + + + P NLG AY +
Sbjct: 115 AIEKWDGDDQDLAQVYNALGVSYVLDGKLDKGSKQFEAAVKLQPGYVTAWNNLGDAYEKK 174
Query: 296 GDMEQSAKCFQDLILKDQNHPAA 318
D++ + K F++++L D N+ A
Sbjct: 175 KDLKSALKAFEEVLLFDPNNKVA 197
>gi|146085809|ref|XP_001465364.1| conserved hypothetical protein [Leishmania infantum JPCM5]
gi|134069462|emb|CAM67785.1| conserved hypothetical protein [Leishmania infantum JPCM5]
Length = 1154
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 102/234 (43%), Gaps = 33/234 (14%)
Query: 170 LGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEE 229
LG+P AV Y+ ++L R E A P L +L AQ +S G P +
Sbjct: 887 LGRPSDAVRVYK---QVLCRGEPPTAPPYLGTLTTNWQAQLQEVQSFGMAGKSGAARPAQ 943
Query: 230 --LEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 287
L++ +++ ESM + + N +LL+ GR + ++ V++ L V P++
Sbjct: 944 ALLDQRITE-AESMHYLSAYLHLCN----LLLREGRYRDALGVVTLALQVWPSSSVLWLG 998
Query: 288 LGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL 347
G+AY+++GD+ + +C Q+ + +PA +A Y ++LA N G +
Sbjct: 999 AGVAYYRAGDLLPAEECLQE---SNTLNPANPRTWA------YLALLAVRLHNVGVEEVV 1049
Query: 348 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDH-RSSGKCLEKAAKL 400
Q +N+ + A +WA L T R S CL +AA L
Sbjct: 1050 QQLLTLNL-------------EDAPLWAELGRTLLGTARFPRLSVLCLRRAAAL 1090
>gi|75909502|ref|YP_323798.1| hypothetical protein Ava_3295 [Anabaena variabilis ATCC 29413]
gi|75703227|gb|ABA22903.1| TPR repeat protein [Anabaena variabilis ATCC 29413]
Length = 311
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 89/219 (40%), Gaps = 38/219 (17%)
Query: 199 LLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLIL 258
LLSL+ + +CL P ++ ++ K L L + L + +Q+
Sbjct: 13 LLSLILL--GECLTPANATIPAIPKLLAQYSLPTAPTLLNQGLQA--------------- 55
Query: 259 LKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAA 318
+++GR+Q +I+ S + +DPN NLG+A Q+G ++ +A F D N A
Sbjct: 56 IQAGRIQDAIAAFQSAIQLDPNLAAAHYNLGLALRQTGQLQPAADAFYRATQSDPNFALA 115
Query: 319 LINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLA 378
N GS+L EG L QA+ + L AL+ +P+ NL
Sbjct: 116 FANLG-------GSLL--------EGNNLQQAN------DYLQRALELEPRLGFAHYNLG 154
Query: 379 NAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIK 417
+ + +KA +L N Y + + ++
Sbjct: 155 LVRQQQQNWEGAIASFQKAVELSKNAPEPHYYLGLCYLQ 193
>gi|356576167|ref|XP_003556205.1| PREDICTED: uncharacterized protein LOC100800455 [Glycine max]
Length = 357
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 63/135 (46%)
Query: 184 EEILLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQS 243
++L+R E D++ EL V+ A G L ++ P + +L +++
Sbjct: 197 RQVLVRRELDLSAKELQEQVRSGDAGATELFELGAVMLRRKFYPAATKFLLQAIEKWDGD 256
Query: 244 DTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAK 303
+ A V+N LG+ ++ G++ I+ + + + P NLG A+ D + + K
Sbjct: 257 NPDLAQVYNALGVSYVRDGKVDKGIAQFETAVKLQPGYVTAWNNLGDAFESKKDYKSALK 316
Query: 304 CFQDLILKDQNHPAA 318
F++++L D N+ A
Sbjct: 317 AFEEVLLFDPNNKVA 331
>gi|145537956|ref|XP_001454689.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124422455|emb|CAK87292.1| unnamed protein product [Paramecium tetraurelia]
Length = 432
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 63/154 (40%), Gaps = 29/154 (18%)
Query: 252 NTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILK 311
NTL ++ R Q +I + ++PN + I N GIA F + + +C+ +I
Sbjct: 284 NTLFIL----NRYQDAIESYDQAIKINPNYIEAIYNKGIALFNLNRFQDAIECYDHVIAI 339
Query: 312 DQNHPAALIN--YAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPK 369
D N+ A N A L +Y L C DQA+ +N P
Sbjct: 340 DSNYNDAYYNKGIALFNLNRYQEAL----------DCYDQATRIN-------------PN 376
Query: 370 AAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 403
+ + N NA Y+ + + +C ++ K++ N
Sbjct: 377 QSDAFYNKGNALYILKRYEEALECYNQSNKIDIN 410
>gi|307193762|gb|EFN76443.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
110 kDa subunit [Harpegnathos saltator]
Length = 1180
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 70/175 (40%), Gaps = 25/175 (14%)
Query: 251 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 310
++ LG + + G+L ++ + + P+ D NL A +GDMEQ+ + +
Sbjct: 134 YSNLGNVYKERGQLPEALENYRHAVRLKPDFIDGYINLAAALVAAGDMEQAVQAY----- 188
Query: 311 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 370
+ Y L C + G L + ++ AK C L A++ P
Sbjct: 189 ------VTALQYNPDLYC----------VRSDLGNLLKALARLDEAKACYLKAIETRPDF 232
Query: 371 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRY----AVAVSRIKDAER 421
A W+NL + G+ + EKA L+PN + + +RI D+ R
Sbjct: 233 AVAWSNLGCVFNAQGEIWLAIHHFEKAVALDPNFLDAYINLGNVLKEARIFDSRR 287
>gi|427716370|ref|YP_007064364.1| hypothetical protein Cal7507_1054 [Calothrix sp. PCC 7507]
gi|427348806|gb|AFY31530.1| Tetratricopeptide TPR_1 repeat-containing protein [Calothrix sp.
PCC 7507]
Length = 517
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 47/235 (20%), Positives = 92/235 (39%), Gaps = 33/235 (14%)
Query: 206 HHAQCLLPES---SGDNSLDKELEPE-----ELEEILSKLKESMQSDTRQAVVWNTLGLI 257
+H Q + P S +G+N LD++L E + + L+ ++++ A ++ GL
Sbjct: 207 YHKQSIQPLSVIENGNNLLDEKLGDECFARGDFDAALTNYNKALKLHPDDADIYYKRGLA 266
Query: 258 LLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPA 317
+ +I+ + + ++PNN G++++Q GD E + + D N
Sbjct: 267 RHEISDYAGAIADYNQAIKINPNNAKAYNKRGLSHYQLGDYEAA--------IDDYNQAI 318
Query: 318 ALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVN-----------------VAKECL 360
+ + A+ + G N G QA +N ++
Sbjct: 319 RINPHVAVNFKNRADARSQLGDNQGAIEDYTQAIKINPNYAIVDTNGSISRYLLTNQQKF 378
Query: 361 LAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSR 415
A+K +P A + N A+A Y GD+ + + K+ PN + Y +R
Sbjct: 379 TKAIKLNPHDAVAYKNRADARYDLGDYEGAIADYIQVIKINPNYIDAYYNCGNAR 433
>gi|374999506|ref|YP_004975594.1| hypothetical protein AZOLI_p60009 [Azospirillum lipoferum 4B]
gi|357428477|emb|CBS91434.1| conserved protein of unknown function; putative TPR domains
[Azospirillum lipoferum 4B]
Length = 652
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 63/169 (37%), Gaps = 47/169 (27%)
Query: 256 LILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNH 315
L L ++GR + + ++L DP++ + NL + GD ++ C++ I ++
Sbjct: 38 LTLHRAGRTAEAEAGYRAVLTADPDHANANNNLAVILRARGDWNEAIDCYRRAIARNATD 97
Query: 316 PAALINYAALLL--------------------------CKYGSVLAGAGANTGEGACLDQ 349
P N+ LLL ++L G A +
Sbjct: 98 PFVHSNHGCLLLDLGRAAEAEEALRTAIRLKPDYAEAHFNLANILRSRGDREAAKAAYGE 157
Query: 350 A-------------------SAVNVAK--ECLLAALKADPKAAHIWANL 377
A AV +A+ EC +AALKADPK+A W NL
Sbjct: 158 ALRLKPDMAAALCNLGDLHKGAVELARAVECFVAALKADPKSAEAWNNL 206
>gi|355572129|ref|ZP_09043311.1| Tetratricopeptide TPR_2 repeat-containing protein [Methanolinea
tarda NOBI-1]
gi|354824845|gb|EHF09084.1| Tetratricopeptide TPR_2 repeat-containing protein [Methanolinea
tarda NOBI-1]
Length = 660
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 69/169 (40%), Gaps = 31/169 (18%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 213
P NA A G Y LG AVS+Y +A I D P + + LL
Sbjct: 295 PNNAVAWNNRGFSYNSLGMFGDAVSAYSQAIAI------DPGNPAAYT----NRGFALLN 344
Query: 214 ESSGDNSL---DK--ELEPE----------------ELEEILSKLKESMQSDTRQAVVWN 252
G+++L D+ L+P+ E L + + + R ++ W+
Sbjct: 345 LGKGEDALGDLDRATTLQPDLATAWSYRALADYRLGRFTEALDDASRATRLNPRDSLAWS 404
Query: 253 TLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQS 301
T G+ LL+ G Q +I L ++PN D N GIA + + + E++
Sbjct: 405 TGGMALLQKGEFQKAIPYFDKALTLNPNASDIWLNKGIALYMAKNNEEA 453
Score = 43.1 bits (100), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 113/304 (37%), Gaps = 43/304 (14%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEI-----------------LLRCEADIAR 196
P A A G + R G+ +A+SSY++A I L R E ++
Sbjct: 193 PALASAAVARGDLLSRFGRNGEALSSYDQALGIDPDSTSVLSKKAQVLAALGRTEEALST 252
Query: 197 PELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGL 256
+ + +++ +A + +S N+L + E L ++ + AV WN G
Sbjct: 253 IDRILVLEPGNATYWVHKSFLLNNLGR------FNESLDASGTAISLEPNNAVAWNNRGF 306
Query: 257 ILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHP 316
G ++S S +A+DP N N G A G E DL P
Sbjct: 307 SYNSLGMFGDAVSAYSQAIAIDPGNPAAYTNRGFALLNLGKGED---ALGDLDRATTLQP 363
Query: 317 --AALINYAALL---LCKYGSVLAGAG-----------ANTGEGACLDQASAVNVAKECL 360
A +Y AL L ++ L A A + G L Q A
Sbjct: 364 DLATAWSYRALADYRLGRFTEALDDASRATRLNPRDSLAWSTGGMALLQKGEFQKAIPYF 423
Query: 361 LAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAE 420
AL +P A+ IW N A Y+ ++ + L++ +L+P M T + V ++
Sbjct: 424 DKALTLNPNASDIWLNKGIALYMAKNNEEALSALDRVLELDPESM-TAWQYKVYALRALG 482
Query: 421 RSQE 424
R +E
Sbjct: 483 RGEE 486
>gi|328700630|ref|XP_001950113.2| PREDICTED: UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit-like
isoform 1 [Acyrthosiphon pisum]
Length = 1045
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 62/155 (40%), Gaps = 21/155 (13%)
Query: 251 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 310
++ LG + + G+LQ ++ + + P+ D NL A +GDMEQ+ + +
Sbjct: 94 YSNLGNVFKERGQLQDALDNYRHAVRLKPDFIDGYINLAAALVAAGDMEQAVQAY----- 148
Query: 311 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 370
+ Y L C + G L ++ AK C L A++ P
Sbjct: 149 ------VTALQYNPELYC----------VRSDLGNLLKALGRLDEAKSCYLKAIETRPDF 192
Query: 371 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 405
A W+NL + + + EKA L+PN +
Sbjct: 193 AVAWSNLGCVFNSLNEIWLAIHHFEKAVALDPNFL 227
Score = 40.0 bits (92), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 67/162 (41%), Gaps = 13/162 (8%)
Query: 254 LGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQ 313
LG +L +S S+S LA+ P N GNL Y++ G ++ + ++ I
Sbjct: 233 LGNVLKESRIFDRSVSAYLRALALSPTNAVVHGNLACVYYEQGLIDLAIDTYRRAIELQP 292
Query: 314 NHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAV----NVAKE---------CL 360
N P A N A L K V A NT C A ++ N+ +E
Sbjct: 293 NFPDAYCNLANALKEKGQVVDAEECYNTALKLCPTHADSLNNLANIKREQGYIEEATGLY 352
Query: 361 LAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 402
L AL+ P+ A +NLA+ G + ++A +++P
Sbjct: 353 LKALEVFPEFAAAHSNLASVLQQQGKLTEALNHYQEAIRIQP 394
>gi|322421649|ref|YP_004200872.1| hypothetical protein GM18_4182 [Geobacter sp. M18]
gi|320128036|gb|ADW15596.1| Tetratricopeptide TPR_1 repeat-containing protein [Geobacter sp. M18]
Length = 1442
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 41/77 (53%)
Query: 251 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 310
WN LG+ L GRL+ ++ L+V+P + NLG A G+++Q+ +C++ ++
Sbjct: 1063 WNALGIALQVQGRLEEAVQCYRKALSVNPGYLHALNNLGSASRALGEVDQAIECYRKVLS 1122
Query: 311 KDQNHPAALINYAALLL 327
D + A N A + L
Sbjct: 1123 IDPEYADARWNLALVQL 1139
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 80/204 (39%), Gaps = 27/204 (13%)
Query: 232 EILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIA 291
E + + ++ D A W+ L L L ++G Q ++ L ++ P + NLG
Sbjct: 976 EAIDCYRHALAIDPALARGWHNLALALKETGEQQQALHALKRAVSAAPGYLEARHNLGEL 1035
Query: 292 YFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQAS 351
Y G+++ + F+ ++ D P L ++ AL G L
Sbjct: 1036 YHAMGELDLAEATFRGILAGD---PGYLPSWNAL------------------GIALQVQG 1074
Query: 352 AVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAV 411
+ A +C AL +P H NL +A G+ + +C K ++P R+ +
Sbjct: 1075 RLEEAVQCYRKALSVNPGYLHALNNLGSASRALGEVDQAIECYRKVLSIDPEYADARWNL 1134
Query: 412 AVSRIKDAERSQEPTEQLSWAGNE 435
A+ +++ + + W G E
Sbjct: 1135 ALVQLQLGQYRE------GWQGYE 1152
>gi|423066047|ref|ZP_17054837.1| tetratricopeptide TPR_2 repeat protein [Arthrospira platensis C1]
gi|406712546|gb|EKD07731.1| tetratricopeptide TPR_2 repeat protein [Arthrospira platensis C1]
Length = 985
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 108/267 (40%), Gaps = 20/267 (7%)
Query: 162 LLGLMYQRLGQPLKAVSSYEKAEEILLRCEA----DIARPELLSLVQIHHAQCLL-PESS 216
LLG ++Q+ G + Y++A+ + R D +PE S + Q P S
Sbjct: 308 LLGKVWQQRGDEYWSRYWYQRAQALGYRESVVERKDPPQPESPSQGKPEIPQAPEEPPSD 367
Query: 217 GDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLA 276
++ L+ ++ ++ LS ++++ D A ++ LG LL RL +++ +
Sbjct: 368 MVAQVEANLQEKQFQQALSLCQQALALDPEAANIYPLLGKALLGLKRLSEAVAAFEKAVQ 427
Query: 277 VDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAAL----------L 326
++P + NLG Y Q EQ+ KC++ I N AA N + L
Sbjct: 428 LNPADATIHTNLGSLYAQMQRWEQAVKCYERAIALQPNLVAAHRNLGKVWQKLGQPQQAL 487
Query: 327 LCKYGSVL-----AGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAY 381
C+Y +++ A G L Q + A+ C ++ P + + NL
Sbjct: 488 SCRYQALILQPDQGEASEFLAVGNSLLQGGRLQEAEVCYRQVVRRSPHDSQAYHNLGEVL 547
Query: 382 YLTGDHRSSGKCLEKAAKLEPNCMSTR 408
G + +A +L+P+ +R
Sbjct: 548 SAQGLWSQAEAAYRRAVELQPDSFESR 574
>gi|322421648|ref|YP_004200871.1| glycosyl transferase family protein [Geobacter sp. M18]
gi|320128035|gb|ADW15595.1| glycosyl transferase family 9 [Geobacter sp. M18]
Length = 991
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 81/185 (43%), Gaps = 21/185 (11%)
Query: 219 NSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVD 278
+ L++ LE +E + +QS+ + G++ +G L+ ++ LS +A+D
Sbjct: 6 SELNRALEENRVERARELCQALLQSEPDSVDLLTLSGVLARLTGELEVALHSLSRAVALD 65
Query: 279 PNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAG 338
P+ + NLG+ G E++A C++ + K + +P AL N LL K G
Sbjct: 66 PSQAELHNNLGVILEDLGRHEEAAACYRRALEKRKLYPEALGNLGNALL-KLGH------ 118
Query: 339 ANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAA 398
+A+ C A+ DP + + +L +A G+ + +C K
Sbjct: 119 ------------PQEAIARFC--DAIALDPGYTNAYYHLGHALRGQGEWEGAVQCYRKVV 164
Query: 399 KLEPN 403
+L+P+
Sbjct: 165 ELKPD 169
>gi|300865159|ref|ZP_07109983.1| hypothetical protein OSCI_1490019 [Oscillatoria sp. PCC 6506]
gi|300336849|emb|CBN55133.1| hypothetical protein OSCI_1490019 [Oscillatoria sp. PCC 6506]
Length = 1093
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 102/217 (47%), Gaps = 11/217 (5%)
Query: 94 GKKINKLGKCRSRISSKMDSALEFGVDADGDQSGLGTSSSSREEKVSSLKTGLVHVARKM 153
G+ ++KLG+C S A+E D LG + + ++E S+
Sbjct: 41 GEALSKLGRC-DEASIAFRHAIELKPDFAWSYHHLGDALAQQQEWEESI-AAFRKAIELN 98
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELL-SLVQIHHAQCLL 212
P++ ++ LG +LGQ +A+++Y +A E L +A+ L +L Q H+ +
Sbjct: 99 PEHFGSYVGLGNSLAKLGQLDEAIAAYRRASE--LNPDAEWIHYALAKALQQRTHSDVVE 156
Query: 213 PESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLS 272
+S + EL P+ +E + L+ +QSD + +W LG L++ G+L+ +I+
Sbjct: 157 AIASYRQMI--ELNPDNVEAYQNLLQ--LQSDNWE--LWLQLGNTLVQQGKLEEAIAAYR 210
Query: 273 SLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLI 309
L+ +P+N LG + G +E++ ++ I
Sbjct: 211 RLIEHNPHNQTAYYGLGECLAKLGQLEEAIAAYRQAI 247
>gi|242278768|ref|YP_002990897.1| hypothetical protein Desal_1296 [Desulfovibrio salexigens DSM 2638]
gi|242121662|gb|ACS79358.1| TPR repeat-containing protein [Desulfovibrio salexigens DSM 2638]
Length = 206
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 248 AVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAK-CFQ 306
AV W +G + ++ G +I L + DPN + LG AYF G+++ + C +
Sbjct: 93 AVPWGNIGYVYMEQGETDKAIKALKRAIKYDPNFVQALSTLGAAYFNEGELDDCIEVCEK 152
Query: 307 DLILKDQNHPA 317
L L D PA
Sbjct: 153 ALKLADNFGPA 163
>gi|254412148|ref|ZP_05025923.1| Tetratricopeptide repeat family [Coleofasciculus chthonoplastes PCC
7420]
gi|196181114|gb|EDX76103.1| Tetratricopeptide repeat family [Coleofasciculus chthonoplastes PCC
7420]
Length = 427
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 75/185 (40%), Gaps = 15/185 (8%)
Query: 253 TLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKD 312
LGL+L + G ++ +IS +A+DPN NLG+A GD E + + + +
Sbjct: 124 NLGLMLYQQGNIEEAISAYQQAIAIDPNLAAARYNLGLALEAVGDTEAALSEYTQAVRLN 183
Query: 313 QNHPAALINYAALLLCKYGSV------LAGAGANTGE--------GACLDQASAVNVAKE 358
N A N ALLL K V L A N + G L Q + + AK
Sbjct: 184 PNSAVAKYN-LALLLAKQNQVDSAIAALRQALRNDSQFVQAHYQLGLLLAQQNQITEAKN 242
Query: 359 CLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKD 418
L A + + + A L + GD + + +++P+ + + + I++
Sbjct: 243 SFLRATQINSRFAPAHYRLGLIFLQQGDAEEAIRRFNWVTQIDPDNVDAYRQLGAALIQN 302
Query: 419 AERSQ 423
E Q
Sbjct: 303 GEYEQ 307
Score = 42.7 bits (99), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 41/84 (48%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
++ E + + Q ++R A LGLI L+ G + +I + + +DP+N D L
Sbjct: 236 QITEAKNSFLRATQINSRFAPAHYRLGLIFLQQGDAEEAIRRFNWVTQIDPDNVDAYRQL 295
Query: 289 GIAYFQSGDMEQSAKCFQDLILKD 312
G A Q+G+ EQ+ + I D
Sbjct: 296 GAALIQNGEYEQAIAALERAISLD 319
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 42/85 (49%)
Query: 237 LKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSG 296
++++Q D + LG L + G++ ++ + +DPN + NLG+ +Q G
Sbjct: 74 FRKALQEDPFIPMARYLLGNALFQQGQIAAAAEQYQMAIGLDPNMAEAHYNLGLMLYQQG 133
Query: 297 DMEQSAKCFQDLILKDQNHPAALIN 321
++E++ +Q I D N AA N
Sbjct: 134 NIEEAISAYQQAIAIDPNLAAARYN 158
Score = 38.9 bits (89), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 72/177 (40%), Gaps = 23/177 (12%)
Query: 134 SREEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEAD 193
+++ +V S L R + AH+ LGL+ + Q +A +S+ +A +I R
Sbjct: 198 AKQNQVDSAIAALRQALRNDSQFVQAHYQLGLLLAQQNQITEAKNSFLRATQINSRFAPA 257
Query: 194 IARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNT 253
R L+ L Q GD EE + + Q D +
Sbjct: 258 HYRLGLIFLQQ------------GD-----------AEEAIRRFNWVTQIDPDNVDAYRQ 294
Query: 254 LGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 310
LG L+++G + +I+ L +++DP + NL +A ++ E + +Q IL
Sbjct: 295 LGAALIQNGEYEQAIAALERAISLDPYDSLAHYNLAVALHRNQQYEDAISEYQQAIL 351
>gi|407974687|ref|ZP_11155595.1| hypothetical protein NA8A_10303 [Nitratireductor indicus C115]
gi|407429770|gb|EKF42446.1| hypothetical protein NA8A_10303 [Nitratireductor indicus C115]
Length = 281
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 70/164 (42%), Gaps = 29/164 (17%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEAD---IARPELLSLVQIHHAQC 210
P++ +A+ L+Y+ +GQ KA++ Y +A I L D I R E+ L
Sbjct: 97 PRSHNAYANRALIYRYMGQNDKALADYNQA--IALNSSYDTAYIGRAEIYRL-------- 146
Query: 211 LLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISV 270
SG +S E L+ L+ ++Q DT + GL+ SG+ Q +I
Sbjct: 147 -----SGRSS-----------EALADLERAIQLDTTDPRAYYRRGLLYQASGQHQYAIED 190
Query: 271 LSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQN 314
++ +++ P G++Y GD E + F I D N
Sbjct: 191 FATAISLAPEAPYGYNGRGLSYLAQGDEENAFSDFNTAIRLDGN 234
>gi|356535697|ref|XP_003536380.1| PREDICTED: uncharacterized protein LOC100785939 [Glycine max]
Length = 354
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 63/135 (46%)
Query: 184 EEILLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQS 243
++L+R E D++ EL V+ A G L ++ P + +L +++
Sbjct: 194 RQVLVRRELDLSAKELQEQVRSGDAGATELFELGAVMLRRKFYPAATKFLLQAIEKWDGD 253
Query: 244 DTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAK 303
+ A V+N LG+ ++ G++ I+ + + + P NLG A+ D + + K
Sbjct: 254 NPDLAQVYNALGVSYVRDGKVDKGIAQFETAVKLQPGYVTAWNNLGDAFESKKDYKSALK 313
Query: 304 CFQDLILKDQNHPAA 318
F++++L D N+ A
Sbjct: 314 AFEEVLLFDPNNKVA 328
>gi|288963124|ref|YP_003453403.1| hypothetical protein AZL_f00990 [Azospirillum sp. B510]
gi|288915376|dbj|BAI76859.1| hypothetical protein AZL_f00990 [Azospirillum sp. B510]
Length = 631
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 80/190 (42%), Gaps = 25/190 (13%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
++E+ L+ L + + + NT G++L + GR ++S+ + LL +DP + NL
Sbjct: 55 KIEQALTVLDAVLAVRPQDWMARNTRGVVLCRLGRANETVSIFTRLLTIDPTFTEGWFNL 114
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL- 347
+A+ GD +A + + P +LL +G L GA AN L
Sbjct: 115 ALAHRALGDTMAAADHLRKAVKLQPAQPLFSTELGSLL---HGQGLLGAAANHLRRIILL 171
Query: 348 --DQAS-----AVNV--------AKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGK 392
DQAS AV++ A+ L L+ DP+ A + L S G+
Sbjct: 172 HPDQASGYLNAAVSLMSDAWYGDAEALLRQGLQLDPQNADMAMRLGQVLL------SCGR 225
Query: 393 CLEKAAKLEP 402
E A L+P
Sbjct: 226 SAEAKAVLKP 235
>gi|218886153|ref|YP_002435474.1| hypothetical protein DvMF_1051 [Desulfovibrio vulgaris str.
'Miyazaki F']
gi|218757107|gb|ACL08006.1| TPR repeat-containing protein [Desulfovibrio vulgaris str.
'Miyazaki F']
Length = 215
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/114 (21%), Positives = 51/114 (44%), Gaps = 1/114 (0%)
Query: 213 PESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLS 272
P N ++ P+ + IL ++++++ D W LG + + + + +I
Sbjct: 59 PSQQSQNGPANQISPDVMGRIL-EMEQAVLKDPNDVAAWTKLGHLYFDTDQPKKAIPAYE 117
Query: 273 SLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL 326
LA+ PN+ D + +LG+ Y + +++ F+ I + H A N +L
Sbjct: 118 KSLALKPNDPDVLTDLGVMYREDHQHDRALATFEKAIAANPKHQIARFNKGIVL 171
>gi|403744749|ref|ZP_10953900.1| Tetratricopeptide TPR [Alicyclobacillus hesperidum URH17-3-68]
gi|403121927|gb|EJY56186.1| Tetratricopeptide TPR [Alicyclobacillus hesperidum URH17-3-68]
Length = 729
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 85/195 (43%), Gaps = 39/195 (20%)
Query: 146 LVHVARKM-PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRC-------EADIARP 197
L HV + P A F L Y +GQ Y+ AEE +LR E
Sbjct: 234 LQHVLNHLDPNMAECQFYLANNYANMGQ-------YDTAEEYVLRYLDMDPNGEYAADAE 286
Query: 198 ELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLI 257
E+L + L+ E G L K E +E + LS +K+ G
Sbjct: 287 EMLDI--------LVDEFGGGRVLQKWQEEKEKLDNLSAVKD---------------GRY 323
Query: 258 LLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPA 317
L++G+ ++++ L ++ DP + NL +AY+ +G +++ + ++++ + ++
Sbjct: 324 FLENGQFEAAVEWLEQVVQEDPGHLAACNNLCLAYYYTGQHDKALRMVEEVLERQPDNLH 383
Query: 318 ALINYAALLLCKYGS 332
AL N ALLL YG+
Sbjct: 384 ALCN-RALLLKHYGA 397
>gi|212638583|ref|YP_002315103.1| TPR -repeat containing protein [Anoxybacillus flavithermus WK1]
gi|212560063|gb|ACJ33118.1| TPR -repeat containing protein [Anoxybacillus flavithermus WK1]
Length = 221
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 49/112 (43%), Gaps = 21/112 (18%)
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLD 348
GI Y Q G E++ KCF + I + N P IN +G+VLA G +
Sbjct: 10 GIQYMQQGQYEEAVKCFHEAIERQPNDPVGYIN--------FGNVLAAVG---------E 52
Query: 349 QASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKL 400
+ A+ + AL+ D KAA + L + YY + + E+A ++
Sbjct: 53 EEKAIRFFHK----ALELDEKAATAYYGLGSIYYNRQQFERAKEQFERAIRV 100
>gi|194334458|ref|YP_002016318.1| hypothetical protein Paes_1653 [Prosthecochloris aestuarii DSM 271]
gi|194312276|gb|ACF46671.1| TPR repeat-containing protein [Prosthecochloris aestuarii DSM 271]
Length = 466
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 83/225 (36%), Gaps = 35/225 (15%)
Query: 234 LSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYF 293
L +L + T + + GLIL K R + L L ++P + L
Sbjct: 123 LEELDNMVTDSTLEKETFFYRGLILQKLERYPEAEKNLEKCLDMEPAFTEAWYELAYCKD 182
Query: 294 QSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAV 353
G +E+SAKC+ + I +D + A N G L +
Sbjct: 183 LLGKLEESAKCYLEAIDQDPYNVNAWYN---------------------RGLVLSKLKRY 221
Query: 354 NVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAV 413
+ A EC AL + W N AN +TG + +C K + EPN ++ Y +A+
Sbjct: 222 DEALECYDMALAIADDFSSAWYNKANVLAITGMIEDAAECYRKTIEFEPNDINALYNLAI 281
Query: 414 SRIKDAERSQEPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFA 458
+ E EQ +I V+I+P A A FA
Sbjct: 282 AY--------EELEQYD------EAISHYSRCVEIKPDFADAWFA 312
>gi|428775101|ref|YP_007166888.1| hypothetical protein PCC7418_0444 [Halothece sp. PCC 7418]
gi|428689380|gb|AFZ42674.1| Tetratricopeptide TPR_1 repeat-containing protein [Halothece sp.
PCC 7418]
Length = 314
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 106/244 (43%), Gaps = 36/244 (14%)
Query: 105 SRISSKMDSALEFGVDADGDQS-----GLGTSSSSREEKVSSLKTGLVHVARK------- 152
S+I + +D A++ DQ+ + S ++ L G +H+ARK
Sbjct: 8 SQIQADLDEAIQLKNKGQLDQALNKIEQILIISPDHAPTLNQL--GAIHLARKEFEKAIA 65
Query: 153 --------MPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQ 204
PKNA A+ LG Y + +A+++Y+KA EI + + + + Q
Sbjct: 66 AYQKNIEFKPKNAQAYHGLGDAYLGMNNFTEAITAYQKALEINPQLPPYVHKKLGDAFQQ 125
Query: 205 IHHAQC----------LLPESSGDNSL--DKELEPEELEEILSKLKESMQSDTR-QAVVW 251
Q L P +G ++ D L+ +E ++ +++++ + + V
Sbjct: 126 AGQKQAAITAYQKAVELNPNQAGFYNVLGDVYLQTNNPKEAITAYQKALEINPQLPPYVH 185
Query: 252 NTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLI-L 310
LG L + G+++ +I+ S +A++P+ LG YFQ+ + ++ F+ + L
Sbjct: 186 KKLGDALKQGGQIEEAIATYQSAIALNPDKPWLYHALGQIYFQTNQLAEAVTAFETFVEL 245
Query: 311 KDQN 314
K+ N
Sbjct: 246 KNDN 249
>gi|431797887|ref|YP_007224791.1| hypothetical protein Echvi_2535 [Echinicola vietnamensis DSM 17526]
gi|430788652|gb|AGA78781.1| tetratricopeptide repeat protein [Echinicola vietnamensis DSM
17526]
Length = 315
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 76/170 (44%), Gaps = 11/170 (6%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEE--------ILLRCEADIARPELLS-LVQ 204
P + +FL GL+ + LG A+ ++++A E + + R + S
Sbjct: 130 PDDYRGYFLRGLVQETLGNYETALQAFDQAIEHDQTITDLYVNKATIQYYRKDYKSATTN 189
Query: 205 IHHAQCLLPESSGDNSLDK--ELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSG 262
++ A+ L PE +L E + ++ L + +++ + QA +N GL L G
Sbjct: 190 LNKAESLNPEEPNIFNLRSLIAFERDAIDSALKWVNKAIDLNAGQAYFYNNRGLYYLFDG 249
Query: 263 RLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKD 312
+++ I ++ L + N + N GI Y+ SG+ + K Q++ KD
Sbjct: 250 QMERGIEDINFSLKQNSKNLFALRNKGIYYYLSGNKPLAIKYLQEVYSKD 299
>gi|407698709|ref|YP_006823496.1| sulfotransferase [Alteromonas macleodii str. 'Black Sea 11']
gi|407247856|gb|AFT77041.1| sulfotransferase [Alteromonas macleodii str. 'Black Sea 11']
Length = 522
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 108/252 (42%), Gaps = 44/252 (17%)
Query: 147 VHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIH 206
V V ++ +AHA+FLLG+++ +GQ KA++ K+ EI E S+ +
Sbjct: 28 VEVIQQFGPHAHAYFLLGIIHIEIGQIEKAIALLTKSNEI-----------ENRSITSAY 76
Query: 207 HAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQS 266
A+C + +LD + ++S +R A+ +T+G+ L + G +
Sbjct: 77 LAKCFALKGDMQQALD------------CVARAPVESLSR-ALDLDTVGVSLSRIGLHED 123
Query: 267 SISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL 326
+I+ LA+ P N N ++ +G E + K F+ I + N A + AL
Sbjct: 124 AIAYFEKALALAPANPQYHYNYAVSCKFAGKFELARKHFEQAIDSEPNFFQA---HFAL- 179
Query: 327 LCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAA-HIWANLANAYYLTG 385
S L G + A L E L+ +KA+P A HI LA Y G
Sbjct: 180 -----SDLGGISPDNNHLARL----------EPLVEKVKANPDARLHIGHALAKEYEALG 224
Query: 386 DHRSSGKCLEKA 397
D+ + + L+ A
Sbjct: 225 DYTRAFESLQHA 236
>gi|389580598|ref|ZP_10170625.1| Tfp pilus assembly protein PilF [Desulfobacter postgatei 2ac9]
gi|389402233|gb|EIM64455.1| Tfp pilus assembly protein PilF [Desulfobacter postgatei 2ac9]
Length = 251
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 78/175 (44%), Gaps = 25/175 (14%)
Query: 234 LSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYF 293
LSKL E+ + + N+LGL + R +I V + LA+ P+ + + NLG+AY
Sbjct: 51 LSKLLEAEKLAPDDPYIQNSLGLAYMGKERDDLAIQVFNKALALKPDYTEALNNLGVAYL 110
Query: 294 QSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAV 353
+ + + K F +L+D +P +Y AN G A L+Q +
Sbjct: 111 REKKWDIAIKTFNK-VLEDMTYPTP--HYPL--------------ANIG-WAQLEQ-NNY 151
Query: 354 NVAKECLLAALKADP---KAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 405
+A++ L AL+ P KA H LA Y +G + L+K K P+ +
Sbjct: 152 PIAQKYFLKALREMPGFIKAIH---GLAQLYIRSGQTDRAIAYLDKNIKRSPDTV 203
>gi|150400673|ref|YP_001324439.1| hypothetical protein Maeo_0235 [Methanococcus aeolicus Nankai-3]
gi|150013376|gb|ABR55827.1| Tetratricopeptide TPR_2 repeat protein [Methanococcus aeolicus
Nankai-3]
Length = 554
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/80 (22%), Positives = 41/80 (51%)
Query: 230 LEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLG 289
EE L+ + + + D +W+ G +L K G+ + ++ V ++ L++DP N + ++
Sbjct: 349 FEEALNYIDKQINRDMDNIDLWSLKGYVLFKMGKYRETLGVYNNALSIDPTNIGILESIA 408
Query: 290 IAYFQSGDMEQSAKCFQDLI 309
I Y G + + ++ L+
Sbjct: 409 ITYENLGKFNDAIRTYEKLL 428
>gi|407783154|ref|ZP_11130359.1| methyltransferase [Oceanibaculum indicum P24]
gi|407203625|gb|EKE73611.1| methyltransferase [Oceanibaculum indicum P24]
Length = 462
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 67/146 (45%), Gaps = 25/146 (17%)
Query: 258 LLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQ--SGDMEQSAKCFQDLILKDQNH 315
L +SGR ++I+ +LL + P + + LG+A Q +G+ E++A +++L D
Sbjct: 107 LARSGRPATAITAYEALLRLRPGHAGAL--LGLARLQAVTGEQERAADTYRELCRIDPRD 164
Query: 316 PAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWA 375
P A ALL+ LD A+ A E L AL+ DP A A
Sbjct: 165 PVAAQELGALLI------------------GLD---ALPEAVEALQRALRLDPSNAESHA 203
Query: 376 NLANAYYLTGDHRSSGKCLEKAAKLE 401
+L A+ L G+ + L +A +L+
Sbjct: 204 HLGRAWMLLGEREKARASLARALELD 229
>gi|392595654|gb|EIW84977.1| TPR-like protein [Coniophora puteana RWD-64-598 SS2]
Length = 798
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 79/190 (41%), Gaps = 26/190 (13%)
Query: 216 SGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLL 275
SG S+D E+L+ +S + ++++D+R W LG L+ +++ + L
Sbjct: 613 SGHESID-----EDLDNAISFFQAALRADSRHYNAWYGLGTCYLRMSKIRLAEYHYRKAL 667
Query: 276 AVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLA 335
+ PNN +G +G+A + GD + F + ++ AL+ Y + +L
Sbjct: 668 DIHPNNAVLLGCVGMAVERRGDKIAALSLFDRAVRIAPDN--ALVRY------RRAKILI 719
Query: 336 GAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLE 395
G ++A E L + P+ +++ LA Y L GD +S L
Sbjct: 720 G-------------MKKYSLAVEDLRQLRDSSPEESNVVFQLAKVYRLMGDEVNSAHWLA 766
Query: 396 KAAKLEPNCM 405
A + P +
Sbjct: 767 VARDMSPKSV 776
>gi|333987252|ref|YP_004519859.1| hypothetical protein MSWAN_1037 [Methanobacterium sp. SWAN-1]
gi|333825396|gb|AEG18058.1| Tetratricopeptide TPR_2 repeat-containing protein [Methanobacterium
sp. SWAN-1]
Length = 369
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 75/192 (39%), Gaps = 17/192 (8%)
Query: 251 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 310
WN ++ L+ R + ++ + L VDP N + +A+ +S + ++
Sbjct: 154 WNDRAMVSLRLNRYEEALEYYDNALKVDPQNVEAFMGKYMAFMGLDKYPESLEYLDKVLE 213
Query: 311 KDQNHPAALINYAALL--LCKYGSVLAGAG-----------ANTGEGACLDQASAVNVAK 357
+ H + + LL L +Y L + A +G L + A
Sbjct: 214 IESQHTSLWASRGILLNQLGRYEEALRCSNKVLKLDPKEPRAWKTKGKSLVELKRPEEAL 273
Query: 358 ECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIK 417
+ L ALK DPK++ +W N A + S C EKA L PN + A +S
Sbjct: 274 KSLEEALKLDPKSSDVWFNKGIALSQLEKFKESLNCFEKALNLNPNNVQACTAKGLS--- 330
Query: 418 DAERSQEPTEQL 429
E+ + P E L
Sbjct: 331 -LEKLENPEEAL 341
>gi|262198282|ref|YP_003269491.1| hypothetical protein [Haliangium ochraceum DSM 14365]
gi|262081629|gb|ACY17598.1| TPR repeat-containing protein [Haliangium ochraceum DSM 14365]
Length = 288
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 49/251 (19%), Positives = 99/251 (39%), Gaps = 37/251 (14%)
Query: 234 LSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYF 293
+S ++++ ++ + A+ W +LG + + ++ A+ +N NLG+AY+
Sbjct: 55 ISAFQQAVAANPKHAMAWASLGHLYKDKRDYKKAVDAYERATAISDDNALLWSNLGMAYY 114
Query: 294 QSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAV 353
++ ++ + + + D A N G Q +
Sbjct: 115 RAKRVDDAQRALERSFQLDSK---------------------SADVNANLGTLYRQRGDI 153
Query: 354 NVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAV 413
A L A+K DPK+A +NLA AY + + + L +A +L+ S ++ + V
Sbjct: 154 EKALRHLRFAVKLDPKSAVYHSNLAIAYRSNKQYDEAEQELRQAIRLDAKEPSYQFNLGV 213
Query: 414 SRIKDAERSQEPTEQLSWAGNEMASILREGDPVQIEPPI--AWAGFAAVQKTHHEVAAAF 471
R QE ++ +A+ R V+++P AW + + +H+ A
Sbjct: 214 -----VYRYQEKVDE------AIAAYTR---AVRLDPGYHKAWYDLGHMHRLNHDNDKAI 259
Query: 472 ETEENELSKME 482
E L +E
Sbjct: 260 EAFSRYLELIE 270
>gi|154337070|ref|XP_001564768.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134061806|emb|CAM38839.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 1158
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 101/233 (43%), Gaps = 31/233 (13%)
Query: 170 LGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEE 229
LG+P +AV Y++A L R E A P L +LV H Q E ++D+
Sbjct: 891 LGRPSEAVRMYKQA---LCRGEPATAPPYLAALVA--HWQAHRQEVQSARTVDQSSVASS 945
Query: 230 LEEIL-SKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
+ +L ++ E+ A + L +LL GR + ++ V++ L V P++
Sbjct: 946 AQALLDQRITEAEGMHYLSAYL--RLCNLLLAEGRYRDALGVVTLALQVWPSSSVLWLGA 1003
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLD 348
G+AY+++GD+ + +C Q+ + +PA +A Y ++LA N G +
Sbjct: 1004 GVAYYRAGDLLPAEECLQE---SNTLNPANPRTWA------YLALLAVRLQNVGVEEVMQ 1054
Query: 349 QASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDH-RSSGKCLEKAAKL 400
Q +N+ + A +WA L T R S CL +AA L
Sbjct: 1055 QLLTLNL-------------EDAPLWAELGRTLLGTAQFPRLSVLCLRRAAAL 1094
>gi|291221465|ref|XP_002730742.1| PREDICTED: tetratricopeptide repeat domain 37-like [Saccoglossus
kowalevskii]
Length = 1566
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 71/152 (46%), Gaps = 16/152 (10%)
Query: 277 VDPNNCDCIGNLGIAYFQ-SGDMEQSAKCFQ---DLILKDQNHPAALINYAALL------ 326
+DP + D LG Y +GD++++ +C+Q DL ++ AAL + L
Sbjct: 495 LDPYHSDTFLYLGYYYENVTGDIKKAKRCYQKSFDLDRRNDEAGAALGDALISLDEQESA 554
Query: 327 LCKYGSVLAGAGANTGEGACLD------QASAVNVAKECLLAALKADPKAAHIWANLANA 380
L Y SV + A A + + A L + + A L AL+ADPK W LA A
Sbjct: 555 LQLYTSVTSRASAGSAKWAWLRLGLYQLKKQEYSQAISSLQCALRADPKDVCCWECLAEA 614
Query: 381 YYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVA 412
Y G + ++ + KAA+L+ + + + +A
Sbjct: 615 YMSRGSYTAALRAFTKAAELDDSSIYCHFQIA 646
>gi|196231762|ref|ZP_03130619.1| TPR repeat-containing protein [Chthoniobacter flavus Ellin428]
gi|196224234|gb|EDY18747.1| TPR repeat-containing protein [Chthoniobacter flavus Ellin428]
Length = 873
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 33/68 (48%)
Query: 230 LEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLG 289
EE + LK+++ W TLG + L+ G++ SI L ++P N + NL
Sbjct: 778 FEEAMESLKKAVSYRPIFGNAWTTLGYVYLQLGKIDESIDACQHALKINPQNAPNLQNLA 837
Query: 290 IAYFQSGD 297
A F+ GD
Sbjct: 838 TAAFKKGD 845
Score = 42.0 bits (97), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 70/145 (48%), Gaps = 8/145 (5%)
Query: 175 KAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESS-GDNSLDKELEPE-ELEE 232
+ +SS+ +E+ R + D A E L Q+ H LP++S G N L L E ++++
Sbjct: 692 REISSWSTLQELYTRHK-DPAGQEK-ELRQLLHE---LPKTSTGWNFLGALLMGEGKIDD 746
Query: 233 ILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAY 292
+ + +++ D + AV W+TLG + G + ++ L ++ P + LG Y
Sbjct: 747 AIDAGRRAVEVDDKDAVAWDTLGCAQSRGGHFEEAMESLKKAVSYRPIFGNAWTTLGYVY 806
Query: 293 FQSGDMEQSAK-CFQDLILKDQNHP 316
Q G +++S C L + QN P
Sbjct: 807 LQLGKIDESIDACQHALKINPQNAP 831
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 116/285 (40%), Gaps = 47/285 (16%)
Query: 159 AHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESSGD 218
A+F LG Y ++G+P ++ +++ A AD +SL
Sbjct: 80 AYFKLGSGYLKIGKPKESAEAFQTAVG-FTPANADAWEGLGISL---------------- 122
Query: 219 NSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVD 278
NSLDK + E L L+ + ++D++ + G+ LL++ + + L+ + +D
Sbjct: 123 NSLDK------INEALEALQHAAEADSKSFDICMLRGVTLLRARKTSEARDTLAKAVELD 176
Query: 279 PNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKY---GSVLA 335
P++ + LG Y Q G +++ F + N L N A LL + G++ A
Sbjct: 177 PDSKNAHAILGFVYLQEGKPQEAVAEFGRALKIAPNDSETLANRAIALLAMHDLPGAIAA 236
Query: 336 GAGANTGE----------GACLDQASAVN---VAKECLLAALKADPKAAHIWANLANAYY 382
GA A L +A + V + L+A AD +A WA L A
Sbjct: 237 TQGAVAANPDNLAARRNLAAFLAKAQKYDETAVEAKALIARQPADKEA---WALLGEADI 293
Query: 383 LTGDHRSSGKCLEKAAKL-----EPNCMSTRYAVAVSRIKDAERS 422
+ + +EKA L E + V+V R+ DAE++
Sbjct: 294 KRERYPQGVEEMEKARALGFDSPEASLELANGLVSVGRLDDAEKT 338
>gi|311745199|ref|ZP_07718984.1| hypothetical protein ALPR1_01835 [Algoriphagus sp. PR1]
gi|126577722|gb|EAZ81942.1| hypothetical protein ALPR1_01835 [Algoriphagus sp. PR1]
Length = 275
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
Query: 231 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 290
E+ L +++D + + + + + S I++L +L DP N D I N+GI
Sbjct: 144 EQTQKYLNRVLENDPTRLDLKTKVAMTYVSSSNPMQGITMLREILEQDPQNEDAIFNMGI 203
Query: 291 AYFQSGDMEQSAKCFQDLILKDQNHPAAL 319
QSG +++A+ F+DLI + HP L
Sbjct: 204 LAIQSGQYKRAAERFEDLI---KYHPQNL 229
>gi|441497885|ref|ZP_20980093.1| TPR repeat containing protein [Fulvivirga imtechensis AK7]
gi|441438451|gb|ELR71787.1| TPR repeat containing protein [Fulvivirga imtechensis AK7]
Length = 467
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 96/258 (37%), Gaps = 38/258 (14%)
Query: 159 AHFLLGLMYQRLGQPLKAVSSYEKA-EEILLRCEADIARPELLSLVQIHHAQCLLPESSG 217
++ +GL YQ + + +A+ +Y+ A EE + D A EL A CL + G
Sbjct: 135 VYYSIGLAYQSMEKYQEAIDAYKNAIEENIFH---DGALYEL--------AYCL--DICG 181
Query: 218 DNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAV 277
ELE +S K+ + +D W LG++ K GR +I + +
Sbjct: 182 -----------ELESSISYYKKFIDADPYSQAAWYNLGIVYNKLGRFDEAIHAYDYAIVI 230
Query: 278 DPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAAL--------LLCK 329
+ N N+G Y Q Q+ ++ I + P A + L K
Sbjct: 231 EENFSSAYFNMGNTYAQMEKYPQALDAYKKTIDIEGPSPEVYCQMATVYEKMEQYELGLK 290
Query: 330 YGSVLAGAG-----ANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLT 384
Y A G G CL++ + ALK D + W +A Y
Sbjct: 291 YFQKATKLDNLYDEAWFGAGKCLNKQQKWYQSLHFYNKALKLDHENPEYWKAVAQTEYQI 350
Query: 385 GDHRSSGKCLEKAAKLEP 402
G+ SS E+A+ L P
Sbjct: 351 GNIVSSIDAYEEASMLTP 368
>gi|332029693|gb|EGI69572.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
110 kDa subunit [Acromyrmex echinatior]
Length = 1087
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 63/155 (40%), Gaps = 21/155 (13%)
Query: 251 WNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLIL 310
++ LG + + G+L ++ + + P+ D NL A +GDMEQ+ + +
Sbjct: 134 YSNLGNVYKERGQLPEALENYRHAVRLKPDFIDGYINLAAALVAAGDMEQAVQAY----- 188
Query: 311 KDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKA 370
+ Y L C + G L + ++ AK C L A++ P
Sbjct: 189 ------VTALQYNPDLYC----------VRSDLGNLLKALARLDEAKACYLKAIETRPDF 232
Query: 371 AHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 405
A W+NL + G+ + EKA L+PN +
Sbjct: 233 AVAWSNLGCVFNAQGEIWLAIHHFEKAVALDPNFL 267
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 125/306 (40%), Gaps = 57/306 (18%)
Query: 248 AVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQD 307
AV W+ LG + G + +I +A+DPN D AY G++ + A+ F
Sbjct: 233 AVAWSNLGCVFNAQGEIWLAIHHFEKAVALDPNFLD-------AYINLGNVLKEARIFDR 285
Query: 308 LILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL-DQASAVNVAKECLLAALKA 366
+ AA + AL L +V+ G AC+ + +++A + A++
Sbjct: 286 AV-------AAYLR--ALNLSPNNAVV------HGNLACVYYEQGLIDLAIDTYRRAIEL 330
Query: 367 DPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVA-VSR----IKDAER 421
P + NLANA G + +C A +L P + +A + R I++A R
Sbjct: 331 QPNFPDAYCNLANALKEKGQVVEAEECYNTALRLCPTHADSLNNLANIKREQGYIEEATR 390
Query: 422 ----SQEPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFAAVQKTHHEVAAAFETEENE 477
+ E + + A + +AS+L++ + E + + +Q T A A+ N
Sbjct: 391 LYLKALEVFPEFAAAHSNLASVLQQQGKLN-EALMHYKEAIRIQPT---FADAYSNMGNT 446
Query: 478 LSKMEECAGAGESAFLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSG 537
L +M++ G A +C A++ +P A +NLA+ H+ SG
Sbjct: 447 LKEMQDIQG---------------ALQCYTRAIQINPAFADAHSNLASI------HKDSG 485
Query: 538 KCLEKV 543
E +
Sbjct: 486 NIPEAI 491
>gi|302412911|ref|XP_003004288.1| glucose repression mediator protein CYC8 [Verticillium albo-atrum
VaMs.102]
gi|261356864|gb|EEY19292.1| glucose repression mediator protein CYC8 [Verticillium albo-atrum
VaMs.102]
Length = 861
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/106 (21%), Positives = 54/106 (50%), Gaps = 1/106 (0%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
+L+E + + +++++ + N + LIL ++ L ++L +D +N + G+L
Sbjct: 51 DLDEAILAYEAALRANPQSIQAMNAISLILRTREHFAKAVEYLQAVLKIDAHNGEAWGSL 110
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYA-ALLLCKYGSV 333
G Y D++Q+ +Q+ ++ +N + Y +L +YGS+
Sbjct: 111 GHCYLMMDDLQQAYSAYQNALVNLRNPKEPRLWYGIGILYDRYGSL 156
>gi|218247925|ref|YP_002373296.1| hypothetical protein PCC8801_3161 [Cyanothece sp. PCC 8801]
gi|257060752|ref|YP_003138640.1| hypothetical protein Cyan8802_2957 [Cyanothece sp. PCC 8802]
gi|218168403|gb|ACK67140.1| TPR repeat-containing protein [Cyanothece sp. PCC 8801]
gi|256590918|gb|ACV01805.1| TPR repeat-containing protein [Cyanothece sp. PCC 8802]
Length = 297
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 79/196 (40%), Gaps = 18/196 (9%)
Query: 228 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 287
++ E LS+ K + Q Q W LG + ++ L + L L++ P+
Sbjct: 67 QQYELALSRAKLATQLAPNQFQSWFILGTLYIQQKELDKGVEALQKALSLAPSEAGIKFT 126
Query: 288 LGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINY--AALLLCKYGSVLAGAG------- 338
LG AYFQ G +++A QD + + PAAL + + L L K +A
Sbjct: 127 LGNAYFQQGKYQEAATELQDGLKIKPDTPAALFDLGNSYLKLNKMSDAIASYQKAIALEK 186
Query: 339 ----ANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCL 394
A G + +N A + AL+ DP+ A +A Y+ G K
Sbjct: 187 NFWPAINNIGLIKYEQGDINGAVKDWQTALEIDPEQAEPQLAVAVGLYIQGKTEQGLKLG 246
Query: 395 EKAAKLEPNCMSTRYA 410
E A KL+ +RYA
Sbjct: 247 EAALKLD-----SRYA 257
>gi|195123061|ref|XP_002006028.1| GI18771 [Drosophila mojavensis]
gi|193911096|gb|EDW09963.1| GI18771 [Drosophila mojavensis]
Length = 930
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 56/138 (40%), Gaps = 21/138 (15%)
Query: 208 AQCLLPESSGDNSLDKELEPEELEEIL----------SKLKE---------SMQSDTRQA 248
A+ L P++ S + P L + ++L+E SM+SD QA
Sbjct: 578 AKALFPQAKAGVSYHARIAPNHLNVFINLANLISKNQTRLEEADHLYRQAISMRSDYVQA 637
Query: 249 VVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDL 308
+ G IL+K R + V L D N D NLG+ + + G +Q+ F
Sbjct: 638 YI--NRGDILMKLNRTAQAQEVYEQALLYDSENADIYYNLGVVFLEQGKSQQAHVYFNKA 695
Query: 309 ILKDQNHPAALINYAALL 326
I H AL+N A LL
Sbjct: 696 IELYPEHEQALLNSAILL 713
>gi|405973205|gb|EKC37931.1| hypothetical protein CGI_10009705 [Crassostrea gigas]
Length = 749
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 72/319 (22%), Positives = 130/319 (40%), Gaps = 45/319 (14%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
L+E + +++++ AV W+ LG + G + +I +A+DPN D
Sbjct: 158 RLDEAKTCYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVALDPNFLD----- 212
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL- 347
AY G++ + A+ F + AA + AL L +V+ G AC+
Sbjct: 213 --AYINLGNVLKEARIFDRAV-------AAYLR--ALNLSPNHAVV------HGNLACVY 255
Query: 348 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 407
+ +++A + A++ P + NLANA G + +C A KL P
Sbjct: 256 YEQGLIDLAIDTYKRAIELQPNFPDAYCNLANALKEKGKVVEAEECYNTALKLSPT---- 311
Query: 408 RYAVAVSRIKDAERSQEPTEQLSWAGNEMASILREGDPVQIEPPIAWAGFAAV---QKTH 464
+A +++ + + +R Q TE E + + V E +A + A+V Q
Sbjct: 312 -HADSLNNLANIKREQGNTE-------EAVKLYLKALEVYPEFAVAHSNLASVLQQQGKL 363
Query: 465 HEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKADPKAAHIWANLA 524
HE ++ E +S A + L + + A +C A++ +P A +NLA
Sbjct: 364 HEALMHYK-EAIRISPTFADAYSNMGNTLKEMQDIQGALQCYTRAIQINPAFADAHSNLA 422
Query: 525 NAYYLTGDHRSSGKCLEKV 543
+ H+ SG E +
Sbjct: 423 SI------HKDSGNIPEAI 435
>gi|242023516|ref|XP_002432178.1| Peroxisomal targeting signal 1 receptor, putative [Pediculus
humanus corporis]
gi|212517575|gb|EEB19440.1| Peroxisomal targeting signal 1 receptor, putative [Pediculus
humanus corporis]
Length = 527
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 87/220 (39%), Gaps = 33/220 (15%)
Query: 223 KELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNC 282
K+LE +L + + + Q D +VW LG ++ + +IS L +++ +N
Sbjct: 240 KKLEENDLPSAVLCFEAAAQIDPENPLVWQYLGTTQAENEQDPRAISALKKCISLQSDNL 299
Query: 283 DCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHP-----------AALINYAALLL---- 327
+ +L I+Y Q+ + + + QN+P N ++LL
Sbjct: 300 TALMSLAISYTNENYQNQACQMLKQWL---QNNPKYSDLVKDSSKGNYYNISSLLSSNIH 356
Query: 328 --CKYGSVLAGAGANTGE---------GACLDQASAVNVAKECLLAALKADPKAAHIWAN 376
K + A TGE G + ++ ++ A +C AAL+A PK +W
Sbjct: 357 QEVKEMFIAAANKCPTGEIDVDVQCGLGVLFNLSNEIDKAADCFKAALQARPKDFRMWNR 416
Query: 377 LANAYYLTGDHRS--SGKCLEKAAKLEPNCMSTRYAVAVS 414
L L HRS + A L P + RY + ++
Sbjct: 417 LGAT--LANGHRSEEAVDAYYNALHLSPGFIRARYNLGIT 454
>gi|410614720|ref|ZP_11325759.1| hypothetical protein GPSY_4037 [Glaciecola psychrophila 170]
gi|410165718|dbj|GAC39648.1| hypothetical protein GPSY_4037 [Glaciecola psychrophila 170]
Length = 616
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 76/181 (41%), Gaps = 36/181 (19%)
Query: 252 NTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILK 311
N LG++ ++ + ++ VL LA++ + NLG+AY + +++ K F ++
Sbjct: 43 NLLGVVFIQIQQADQAVLVLEKALAINNKDAQTYNNLGLAYKELHQFKKAQKAFNSSLIL 102
Query: 312 DQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNV-AKECLL--------- 361
+ P L N G++LA + D+A ++ ECL
Sbjct: 103 NPQQPQILNN--------LGNILAAQDQHKQATLVFDKALKLDANYPECLSNFAQSLKEL 154
Query: 362 ----AALKADPKAAHIWANLANAYYLT---------GDHRSSGKCLEKAAKLE---PNCM 405
AL+A A H+ N N+YYL D+ S+ K EKA ++ P C+
Sbjct: 155 GNLEIALRAIEHANHLEPN--NSYYLNVIGEIQLAKVDYESAKKTFEKAMAIDNYMPACI 212
Query: 406 S 406
+
Sbjct: 213 N 213
>gi|389749237|gb|EIM90414.1| TPR-like protein [Stereum hirsutum FP-91666 SS1]
Length = 799
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 77/184 (41%), Gaps = 23/184 (12%)
Query: 224 ELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCD 283
EL E+++ + + ++++D+R W LG L+ +++ + + PNN
Sbjct: 617 ELIDEDIDNAILAFQTALRADSRHYNAWYGLGTCYLRMSKIRMAEYHYRKAAEIHPNNAV 676
Query: 284 CIGNLGIAYFQSGDMEQSAKCFQDLI-LKDQNHPAALINYAALLLCKYGSVLAGAGANTG 342
+G +G+A + GD E + F + + L +N AL+ Y + +L G T
Sbjct: 677 LLGCVGMAVERRGDREGALALFNEAVKLSPEN---ALVRY------RRAKMLIGMKRYTA 727
Query: 343 EGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 402
A L + P+ +++ LA AY L GD S + L A + P
Sbjct: 728 -------------AVRDLEYLRDSTPEESNVIFQLARAYRLIGDEVKSAQLLAVARDVSP 774
Query: 403 NCMS 406
++
Sbjct: 775 KSVN 778
>gi|330509115|ref|YP_004385543.1| TPR-repeat-containing protein [Methanosaeta concilii GP6]
gi|328929923|gb|AEB69725.1| TPR-repeat protein [Methanosaeta concilii GP6]
Length = 1140
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 36/170 (21%), Positives = 68/170 (40%)
Query: 231 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 290
+E + ++Q D A W + G L GR + ++ L +DPN G
Sbjct: 351 DESIEAYDRALQLDPSDARAWTSKGHALRSLGRNREAVLAYDRALKIDPNRATAWSGKGA 410
Query: 291 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQA 350
A G +S + + +++ + P + AAL + + A + G + A
Sbjct: 411 ALRDQGRYNESVQAYDEVLRAVERDPTYRYSSAALAVADAWLGKSKAESLMGPDKAEEAA 470
Query: 351 SAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKL 400
A N + + A++ DP++A W NA + S + E+A ++
Sbjct: 471 IAYNESLQAYEKAIQIDPESARAWIGRGNALLSLEKYSDSKEAYERAVEV 520
>gi|312076633|ref|XP_003140949.1| TPR Domain containing protein [Loa loa]
gi|307763891|gb|EFO23125.1| TPR Domain containing protein [Loa loa]
Length = 228
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 39/195 (20%), Positives = 78/195 (40%), Gaps = 23/195 (11%)
Query: 222 DKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNN 281
D+ +E E+L L+++++ W LGL L R + + + L++
Sbjct: 39 DRSVEAEQL------LRKAVEIKPNFPAAWMNLGLAQLAQKRYKDAENSFEQALSLRFPY 92
Query: 282 CDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL--------------- 326
DC+ N+G+ Y + + + +Q++ + H A +N LL
Sbjct: 93 PDCLYNMGLLYLRQNQKTYAKQIWQNITRANPGHKRAWLNLLVLLDETNNCAEAISLADK 152
Query: 327 LCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGD 386
+ KY S A + G C + + A++ LL A++ +P W N+ Y+
Sbjct: 153 VLKYHS--KDASVLSQLGTCYGKLGKYDSAEKFLLYAVELEPTTVAYWKNIGALYHRWNK 210
Query: 387 HRSSGKCLEKAAKLE 401
+ KA +++
Sbjct: 211 FEKAKFAYWKAFQVQ 225
>gi|383319448|ref|YP_005380289.1| TPR repeats containing protein [Methanocella conradii HZ254]
gi|379320818|gb|AFC99770.1| TPR repeats containing protein [Methanocella conradii HZ254]
Length = 1006
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 54/277 (19%), Positives = 111/277 (40%), Gaps = 42/277 (15%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 213
P +A AH+ LGL + G +A+ + +A R + D A +L + + LL
Sbjct: 476 PDDAEAHYNLGLALSKKGSLDQAIREFREA----YRLKPDFAEA-FYNLAVVFGKKGLLD 530
Query: 214 ESSGDNSLDKELEPEE----------------LEEILSKLKESMQSDTRQAVVWNTLGLI 257
++ + L P+ +++ + + +E++ A LGL
Sbjct: 531 DAIREYREAIRLRPDYAEAHYNLAIAYSKKNMVDDAIKEFREAVHLRPDDANAHYNLGLA 590
Query: 258 LLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPA 317
L K G L ++I ++ + P++ NL +A + G ++++ K F++ I +
Sbjct: 591 LNKKGLLDNAIREYVEVVRLRPDDAKAHNNLALALYDKGMLDEAVKEFREAIRIKPEY-- 648
Query: 318 ALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANL 377
A A+ G LD+ ++ A L A++ P+ + +L
Sbjct: 649 -------------------AEAHYNLGVALDRKGLIDEAIGEYLIAIEMKPEEPNAHYSL 689
Query: 378 ANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVS 414
A Y G + K ++ L+P+ S R+ + ++
Sbjct: 690 GMALYKKGLLDDAIKEFKEVIWLKPDDFSARFQLGLA 726
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 40/201 (19%), Positives = 87/201 (43%), Gaps = 19/201 (9%)
Query: 230 LEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLG 289
++ + + +E+++ A N LG++L G + +I + + + P++ + NLG
Sbjct: 257 FDQAIREYREAVRLKPDYAKAHNNLGIVLDYKGMVDEAIKEYRAAVNLKPDDAEAHYNLG 316
Query: 290 IAYFQSGDMEQSAKCFQDLILKDQNHPAA--LINYAALLLCKYGSV-------------- 333
+A +++++ F++ + N+P A + YA LC+ G +
Sbjct: 317 VALTSKNELDEAIHEFKEAVKLKPNYPEAHFKLGYA---LCRKGLLDDAIRELREAIWLR 373
Query: 334 LAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKC 393
A A+ G + + ++ A L A++ P A NL AY G + K
Sbjct: 374 PGFAEAHYNLGVVFGKKNMMDDAIRELKDAIRLRPDYAEAHYNLGLAYDYKGQIDDAIKE 433
Query: 394 LEKAAKLEPNCMSTRYAVAVS 414
++A ++ P+ + R + V+
Sbjct: 434 YKEALRIRPDYVKARNNLGVA 454
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 74/165 (44%), Gaps = 23/165 (13%)
Query: 144 TGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPEL-LSL 202
T L R P +A+ H+ LG++ +G+ A+ Y +A LR + D A+ L +
Sbjct: 806 TELGEALRLKPDDANTHYNLGVVMANMGRFDDAIREYREA----LRIKPDYAKAHNNLGI 861
Query: 203 VQIHHAQCLLPESSGDNSLDKELEPEE----------------LEEILSKLKESMQSDTR 246
V + Q E+ + L+P++ L+E + +LKE+++
Sbjct: 862 VLDYKGQV--DEAIAEYLEAVRLKPDDANAHYNLGLAYDNKGMLDEAIRELKEALRLKPD 919
Query: 247 QAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIA 291
A LG+IL K G L+ +I + +++ P+ + NLG A
Sbjct: 920 DANAHYNLGVILGKKGLLKEAIDEYNIAVSLRPDYAEAYYNLGFA 964
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 58/278 (20%), Positives = 109/278 (39%), Gaps = 38/278 (13%)
Query: 151 RKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQC 210
R P + AH+ LG+ G A+ Y ++ LR D AR H++
Sbjct: 99 RLNPDFSEAHYNLGVALDDKGLLDDAIKEYRES----LRLNPDYARA--------HYSLG 146
Query: 211 LLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISV 270
+ +L K ++L+E + + KE+++ V +G++L + G + +I
Sbjct: 147 I--------ALGKR---DQLDEAIHEFKEALRLQPDNPEVHYNMGVVLARKGLIDDAIKA 195
Query: 271 LSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKY 330
+A+ P++ + NLG++ G ++++ F++ + + A N L L K
Sbjct: 196 FRDAIALKPDDAEAHYNLGVSLDYKGLIDEAISEFRETVWLKPDDAEAHYN-LGLALSKK 254
Query: 331 GSVLAG--------------AGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWAN 376
G A A+ G LD V+ A + AA+ P A N
Sbjct: 255 GMFDQAIREYREAVRLKPDYAKAHNNLGIVLDYKGMVDEAIKEYRAAVNLKPDDAEAHYN 314
Query: 377 LANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVS 414
L A + + ++A KL+PN + + +
Sbjct: 315 LGVALTSKNELDEAIHEFKEAVKLKPNYPEAHFKLGYA 352
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 52/261 (19%), Positives = 103/261 (39%), Gaps = 44/261 (16%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 213
P A AH+ LG+++ + A+ + A +R D A + H+ L
Sbjct: 374 PGFAEAHYNLGVVFGKKNMMDDAIRELKDA----IRLRPDYA--------EAHYNLGLAY 421
Query: 214 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 273
+ G ++++ + + KE+++ N LG+ L + G L +I
Sbjct: 422 DYKG-----------QIDDAIKEYKEALRIRPDYVKARNNLGVALDEKGFLDDTIREFRE 470
Query: 274 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSV 333
++ + P++ + NLG+A + G ++Q+ + F++ + A N A +
Sbjct: 471 VVWLKPDDAEAHYNLGLALSKKGSLDQAIREFREAYRLKPDFAEAFYNLAVVF------- 523
Query: 334 LAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKC 393
G+ LD A+ +E A++ P A NLA AY + K
Sbjct: 524 --------GKKGLLD--DAIREYRE----AIRLRPDYAEAHYNLAIAYSKKNMVDDAIKE 569
Query: 394 LEKAAKLEPNCMSTRYAVAVS 414
+A L P+ + Y + ++
Sbjct: 570 FREAVHLRPDDANAHYNLGLA 590
Score = 40.0 bits (92), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 108/280 (38%), Gaps = 49/280 (17%)
Query: 147 VHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIH 206
V V R P +A AH L L G +AV + +A +R + + A V +
Sbjct: 605 VEVVRLRPDDAKAHNNLALALYDKGMLDEAVKEFREA----IRIKPEYAEAHYNLGVALD 660
Query: 207 HAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQS 266
+ L+ E+ G+ + E++PEE S LG+ L K G L
Sbjct: 661 R-KGLIDEAIGEYLIAIEMKPEEPNAHYS------------------LGMALYKKGLLDD 701
Query: 267 SISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL 326
+I ++ + P++ LG+A+ + ++ + + ++ + PA N +L
Sbjct: 702 AIKEFKEVIWLKPDDFSARFQLGLAFNEKNMLDDAIRELREAASMEPGDPAIHYNLGLVL 761
Query: 327 LCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGD 386
G LD A+ K L LK D AH + LA Y G
Sbjct: 762 ---------------GRKGLLD--DAIGEFKAAL--KLKPDDVNAHYYLGLAYNY--KGM 800
Query: 387 HRSSGKCLEKAAKLEPNCMSTRYAVAV-----SRIKDAER 421
+ + L +A +L+P+ +T Y + V R DA R
Sbjct: 801 YDDAATELGEALRLKPDDANTHYNLGVVMANMGRFDDAIR 840
>gi|198434517|ref|XP_002131769.1| PREDICTED: similar to O-linked N-acetylglucosamine transferase
[Ciona intestinalis]
Length = 1042
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 72/324 (22%), Positives = 132/324 (40%), Gaps = 67/324 (20%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
LEE + +++++ T AV W+ LG + G + +I + +DPN D
Sbjct: 178 RLEEAKACYLKAIETQTNFAVAWSNLGCVFNSQGEIWLAIHHFEKAVKLDPNFLD----- 232
Query: 289 GIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL- 347
AY G++ + A+ F + AA + AL L +V+ G AC+
Sbjct: 233 --AYINLGNVLKEARIFDRAV-------AAYLR--ALNLSPNHAVV------HGNLACVY 275
Query: 348 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 407
+ V++A + A++ P + NLANA G + +C KA +L P
Sbjct: 276 YEQGLVDLAIDTYKRAIELQPHFPDAYCNLANALKEKGKVGDAEECYNKALRLCPT---- 331
Query: 408 RYAVAVSRIKDAERSQ--------------EPTEQLSWAGNEMASILREGDPVQIEPPIA 453
+A +++ + + +R Q E + + A + +AS+L++ +Q E +
Sbjct: 332 -HADSLNNLANIKREQGLIEEAIALYSKALEVFPEFAAAHSNLASVLQQQGKLQ-EALLH 389
Query: 454 WAGFAAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKAD 513
+ + T A A+ N L +M++ G A +C A++ +
Sbjct: 390 YKEAIRISPT---FADAYSNMGNTLKEMQDVQG---------------AIQCYTRAIQIN 431
Query: 514 PKAAHIWANLANAYYLTGDHRSSG 537
P A +NLA+ H+ SG
Sbjct: 432 PAFADAHSNLASV------HKDSG 449
Score = 39.3 bits (90), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 69/168 (41%), Gaps = 21/168 (12%)
Query: 238 KESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGD 297
K +++++ A ++ LG + + G+LQ ++ + + P+ D NL A +GD
Sbjct: 85 KHAIKTNPMLAEAYSNLGNVYKERGQLQEALDHYRHAVRLKPDFIDGYINLAAALVTAGD 144
Query: 298 MEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAK 357
+E + + + Q +P L C + G L + AK
Sbjct: 145 LEGAVHAYFSAL---QINPE--------LYC----------VRSDLGNLLKALGRLEEAK 183
Query: 358 ECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCM 405
C L A++ A W+NL + G+ + EKA KL+PN +
Sbjct: 184 ACYLKAIETQTNFAVAWSNLGCVFNSQGEIWLAIHHFEKAVKLDPNFL 231
>gi|261403119|ref|YP_003247343.1| serine/threonine protein kinase [Methanocaldococcus vulcanius M7]
gi|261370112|gb|ACX72861.1| serine/threonine protein kinase with TPR repeats
[Methanocaldococcus vulcanius M7]
Length = 1173
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 67/156 (42%), Gaps = 17/156 (10%)
Query: 258 LLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIA-----------YFQSGDMEQSAKCFQ 306
L ++G +++ +L ++PN+ + NL I F+S E + F+
Sbjct: 70 LFENGAYNNALKKYEEILKLNPNDTNIKTNLNICKEKILLNEGELLFRSKKYEDALSKFK 129
Query: 307 DLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKA 366
+++ D + A A + + + ++L N ++ N A + ALK
Sbjct: 130 EVLKIDSKNSIAK---AKIKMIE--NILRIEEINKTAKNLFNKGK-YNDAIKLYNEALKL 183
Query: 367 DPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 402
DPK +W N N YY D++ + KC EKA L P
Sbjct: 184 DPKNDVLWNNCGNVYYALKDYQMALKCYEKALSLNP 219
>gi|418677963|ref|ZP_13239237.1| tetratricopeptide repeat protein [Leptospira kirschneri serovar
Grippotyphosa str. RM52]
gi|400321153|gb|EJO69013.1| tetratricopeptide repeat protein [Leptospira kirschneri serovar
Grippotyphosa str. RM52]
Length = 1197
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 30/169 (17%), Positives = 72/169 (42%), Gaps = 23/169 (13%)
Query: 135 REEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADI 194
R+ ++ +TG + K P + ++H+ +G+++ + + ++ +++++ L D
Sbjct: 688 RKGEIDKAETGFKEILTKKPDSYYSHYQMGIIHLQRKKYEASIDAFDRS----LLLNKDF 743
Query: 195 ARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTL 254
+ + ++H S +K+L EE E + Q D + +
Sbjct: 744 VAARIGKGISLYH------------SGNKKLAKEEFEA-------ATQQDAANELAPYNI 784
Query: 255 GLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAK 303
G+IL +I + ++ +P D + Y++ GD+EQ+ K
Sbjct: 785 GIILFNDNLYNEAIGIFKEIIQKNPEFSDAHYQISYIYYKRGDLEQAEK 833
>gi|319790334|ref|YP_004151967.1| hypothetical protein Theam_1363 [Thermovibrio ammonificans HB-1]
gi|317114836|gb|ADU97326.1| Tetratricopeptide TPR_1 repeat-containing protein [Thermovibrio
ammonificans HB-1]
Length = 265
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 43/78 (55%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
E+ L+ L ++ + + ++N LGL LK G L+ + L L + PN + NL
Sbjct: 60 EIPLALNYLYKAKKLEPNDPKIYNALGLAFLKRGDLKRARENLQKALRLKPNFSEAWLNL 119
Query: 289 GIAYFQSGDMEQSAKCFQ 306
G+ Y + G+++++ +C++
Sbjct: 120 GMLYEEEGNLKEARRCYE 137
>gi|88602246|ref|YP_502424.1| tetratricopeptide TPR_2 [Methanospirillum hungatei JF-1]
gi|88187708|gb|ABD40705.1| Tetratricopeptide TPR_2 [Methanospirillum hungatei JF-1]
Length = 635
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 40/191 (20%), Positives = 74/191 (38%), Gaps = 13/191 (6%)
Query: 225 LEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDC 284
L+ +++EE L K+S+ D W+ GL K G+ ++ + L ++P + D
Sbjct: 399 LKMKKVEEALDATKKSLLLDKWNPDTWSLRGLCFYKLGKFNEALQCYDNALKINPKHLDA 458
Query: 285 IGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALL---------LCKYGSVL- 334
+ N + + + + ++ I + ++ A N +L L Y V+
Sbjct: 459 MKNRALCLHKLKRHSDALEYYEHAIAGNPHNIEAWFNRGLILHKAKNYDEALHSYDKVIE 518
Query: 335 ---AGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSG 391
A A +G Q A + A DP A W ++ Y H+ +
Sbjct: 519 LDKFHAKAYFNKGLIHRQLEQYFEALQAFSQATSVDPSFASAWYHMGLIYTDLVRHKEAL 578
Query: 392 KCLEKAAKLEP 402
+C +K KL P
Sbjct: 579 QCYDKTLKLNP 589
>gi|428175987|gb|EKX44874.1| hypothetical protein GUITHDRAFT_109295 [Guillardia theta CCMP2712]
Length = 703
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 86/193 (44%), Gaps = 16/193 (8%)
Query: 128 LGTSSSSREEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEI- 186
LGT S+R E +++ V PK A AH+ +G ++ +L +A+SS+++A +
Sbjct: 79 LGTVFSARGEDHKAIE-AFREVIHIQPKYATAHYNIGNIFYKLNMIDEAISSFKEAISVD 137
Query: 187 --LLRCEADIARPELLSL------VQIHHAQCLLPE---SSGDNSLDKELEP-EELEEIL 234
+ A++A LL L + HH + + S G +L L ELE +
Sbjct: 138 PTYVHAHANVA--TLLHLKGDLQGAKKHHQASIRSDPGFSDGWMNLGNVLRSLGELEASV 195
Query: 235 SKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQ 294
+ + +V+ LG+ L + G + +IS + L NLG+ Y Q
Sbjct: 196 QAYETAASLKPDHGMVYYNLGIALWEKGEFERAISAYTLSLTFSGKLASAYYNLGMCYQQ 255
Query: 295 SGDMEQSAKCFQD 307
G +++S FQ+
Sbjct: 256 LGRLQESRWSFQN 268
Score = 40.0 bits (92), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 69/173 (39%), Gaps = 21/173 (12%)
Query: 248 AVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQD 307
A + LG + G +I ++ + P N+G +++ ++++ F++
Sbjct: 73 ATAYFNLGTVFSARGEDHKAIEAFREVIHIQPKYATAHYNIGNIFYKLNMIDEAISSFKE 132
Query: 308 LILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKAD 367
I D + A N A LL K G G AK+ A++++D
Sbjct: 133 AISVDPTYVHAHANVATLLHLK--------GDLQG-------------AKKHHQASIRSD 171
Query: 368 PKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAVSRIKDAE 420
P + W NL N G+ +S + E AA L+P+ Y + ++ + E
Sbjct: 172 PGFSDGWMNLGNVLRSLGELEASVQAYETAASLKPDHGMVYYNLGIALWEKGE 224
>gi|405364939|ref|ZP_11026385.1| Adenylate cyclase [Chondromyces apiculatus DSM 436]
gi|397089504|gb|EJJ20413.1| Adenylate cyclase [Myxococcus sp. (contaminant ex DSM 436)]
Length = 482
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 106/287 (36%), Gaps = 64/287 (22%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 213
PK +A LG++ +RLG+P +A SY KA E A PE Q CL
Sbjct: 101 PKLDYAWTNLGIVQERLGKPAEAERSYRKALE---------AAPE-----QQSAWDCLT- 145
Query: 214 ESSGDNSLDKELEPEELEEILSKLKES-----------MQS----------------DTR 246
G +LE EL E L+ +S +QS D R
Sbjct: 146 RLYGRTGRAAKLE-AELRERLTSQPDSVTLRTALAITLLQSKDPAAAAAEAKLALKGDER 204
Query: 247 QAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQ 306
L + + G+ + + VL + A+D + LG+ Y Q+ + F+
Sbjct: 205 HVRAMQVLAQVYYREGKHELARMVLENARAIDAKDGATHNALGLVYLALDARPQAMEAFK 264
Query: 307 DLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAALKA 366
+ A+LL + A A GA L++A A L AA++A
Sbjct: 265 E---------------ASLLRPDF------AEARNNFGALLNEAQDYAAAVTELEAAVRA 303
Query: 367 DPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRYAVAV 413
P A NL NAY TGD + E+ L P + +A+
Sbjct: 304 APDFASARLNLGNAYRGTGDFARARAEYEQVLLLRPTAADAYFNLAI 350
>gi|390958075|ref|YP_006421832.1| Tfp pilus assembly protein PilF [Terriglobus roseus DSM 18391]
gi|390958416|ref|YP_006422173.1| Tfp pilus assembly protein PilF [Terriglobus roseus DSM 18391]
gi|390412993|gb|AFL88497.1| Tfp pilus assembly protein PilF [Terriglobus roseus DSM 18391]
gi|390413334|gb|AFL88838.1| Tfp pilus assembly protein PilF [Terriglobus roseus DSM 18391]
Length = 580
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 77/345 (22%), Positives = 137/345 (39%), Gaps = 80/345 (23%)
Query: 111 MDSALEFGVDADGDQSGLGTSSSSR---EEKVSSLKTGLVHVARKMPKNAHAHFLLGLMY 167
+ +A+E G + LGT ++ + E+ + L+ L R +P AHAH LG +
Sbjct: 157 LKAAVERGETSAALLDALGTVTAQQRRYEQAEAQLEAALTADVRYVP--AHAH--LGSVL 212
Query: 168 QRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPESSGDNSLDKELEP 227
L QP A S ++KA ++ A A+ +LV+++ A
Sbjct: 213 LALHQPAPAASEFKKAVDLGDASSATAAQFGR-ALVELNRA------------------- 252
Query: 228 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 287
++ ++ L+ ++Q D + L L G +S+++ + +A +P N + + N
Sbjct: 253 ---DDAVAVLEPALQRDPSSLHLMYALALARQAQGDAAASLALFAKFVAAEPENAEALTN 309
Query: 288 LGIAYFQSGDMEQSAKCFQ-------DLILK-----------DQNHPAALINYAALLLCK 329
G+A Q+GD + +Q + +L+ D +H AL + A L +
Sbjct: 310 YGLALVQTGDAAGGLRRYQAALAHSDNALLRQNIGVAYLQQSDLDH--ALEQFRAGLAKE 367
Query: 330 YGSV---------------LAGAGANTGEGACLD---------------QASAVNVAKEC 359
GSV +AGA A + LD Q A +
Sbjct: 368 PGSVQLHYDLGLALKLKDDVAGATAELRKTEELDPNLPDAPYTLGVLEMQQGRFQEAAQQ 427
Query: 360 LLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNC 404
L A+ +P WA L + Y G+ + + L +A KL+P+
Sbjct: 428 LQKAVMLEPHNGEAWALLGSVYRQGGESEKAAEALRQAIKLQPDA 472
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 39/74 (52%)
Query: 253 TLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKD 312
TLG++ ++ GR Q + L + ++P+N + LG Y Q G+ E++A+ + I
Sbjct: 410 TLGVLEMQQGRFQEAAQQLQKAVMLEPHNGEAWALLGSVYRQGGESEKAAEALRQAIKLQ 469
Query: 313 QNHPAALINYAALL 326
+ P I A+++
Sbjct: 470 PDAPGPHITLASVM 483
>gi|166366084|ref|YP_001658357.1| glycosyl transferase family protein [Microcystis aeruginosa
NIES-843]
gi|166088457|dbj|BAG03165.1| probable glycosyl transferase [Microcystis aeruginosa NIES-843]
Length = 403
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 2/90 (2%)
Query: 226 EPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCI 285
E E E LS +++++ D A + LGL+L + RL SI L ++ +N
Sbjct: 289 EAENYEAALSVFEKTVEIDPSYADGYYNLGLVLKQLHRLPESIKAYKKALKLNQDNPTIY 348
Query: 286 GNLGIAYFQSGDMEQSAKCFQD--LILKDQ 313
NLG+AY G ++ K +Q +LKDQ
Sbjct: 349 QNLGVAYIVFGSYNEAIKIWQKGLQLLKDQ 378
>gi|386875698|ref|ZP_10117857.1| tetratricopeptide repeat protein [Candidatus Nitrosopumilus salaria
BD31]
gi|386806454|gb|EIJ65914.1| tetratricopeptide repeat protein [Candidatus Nitrosopumilus salaria
BD31]
Length = 273
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 37/72 (51%)
Query: 255 GLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQN 314
GL L + + +I+ SLL + P + N+GIA + G+++ +A+C+ I D
Sbjct: 51 GLALNQIKKYSDAITCFDSLLEISPKDAQAFNNMGIAMAEMGNIQGAAECYDKAIEADPK 110
Query: 315 HPAALINYAALL 326
H A+ N LL
Sbjct: 111 HAASYFNKGVLL 122
Score = 42.0 bits (97), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 38/181 (20%), Positives = 78/181 (43%), Gaps = 25/181 (13%)
Query: 244 DTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAK 303
D + +++N +++++ + + +IS+ + +L +P N + N G+A Q +
Sbjct: 8 DNSEDLMYN--AMLMMEKNQPKGAISLFNKILKQEPENTSALFNKGLALNQIKKYSDAIT 65
Query: 304 CFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAKECLLAA 363
CF D +L+ A N + + + G++ A EC A
Sbjct: 66 CF-DSLLEISPKDAQAFNNMGIAMAEMGNIQGAA--------------------ECYDKA 104
Query: 364 LKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMSTRY--AVAVSRIKDAER 421
++ADPK A + N +H + + L+KA LEP ++ + + + +IK E
Sbjct: 105 IEADPKHAASYFNKGVLLDKLQEHEEAIQVLDKAIALEPRKPNSLFYKGIILGKIKKHEE 164
Query: 422 S 422
+
Sbjct: 165 A 165
>gi|357039147|ref|ZP_09100942.1| Tetratricopeptide TPR_1 repeat-containing protein [Desulfotomaculum
gibsoniae DSM 7213]
gi|355358611|gb|EHG06377.1| Tetratricopeptide TPR_1 repeat-containing protein [Desulfotomaculum
gibsoniae DSM 7213]
Length = 208
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 71/175 (40%), Gaps = 25/175 (14%)
Query: 228 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 287
E +EE ++ L E+ + Q LG+ L++ G+L +I+ +A + N
Sbjct: 9 EFIEEQINMLNENPECANAQY----NLGVSLMQQGKLNEAINFFEEAIANSGRMFEACVN 64
Query: 288 LGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL 347
LG YF+ GD+E+ + + + + P YA +G
Sbjct: 65 LGYIYFKLGDLEKVVEANKKAV---EIEPRYARGYA------------------NQGFAY 103
Query: 348 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 402
Q S + A E L A++ +P+ W+NL NAY D + EK + P
Sbjct: 104 LQMSKTDEAIEALNEAIELNPEIVQAWSNLINAYIQKDDLDKAIATGEKLVEFAP 158
>gi|222053745|ref|YP_002536107.1| hypothetical protein Geob_0641 [Geobacter daltonii FRC-32]
gi|221563034|gb|ACM19006.1| TPR repeat-containing protein [Geobacter daltonii FRC-32]
Length = 911
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 77/167 (46%), Gaps = 19/167 (11%)
Query: 153 MPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPEL-LSLV-------- 203
+P +A +F +G ++L +P++A + Y +A L+ + D A L LV
Sbjct: 427 LPDSAVINFNMGNTMKKLERPIEATAYYREA----LKTDPDFAEAHYNLGLVLQGQRLFD 482
Query: 204 ----QIHHAQCLLPESSGD--NSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLI 257
+ A L P +G N D + ++E+ ++ + + D + A N+LG
Sbjct: 483 QALDEYERALALRPAHAGTLHNMGDILQDRGQVEQAVACYDKVLALDPQLANTHNSLGNA 542
Query: 258 LLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKC 304
LL + +I+ +A+DP+N NLG A+ GD++Q+ C
Sbjct: 543 LLCQEKYPEAIAAYERAMAIDPDNPMIHNNLGAAFKDKGDLDQAIAC 589
>gi|421088464|ref|ZP_15549289.1| tetratricopeptide repeat protein [Leptospira kirschneri str.
200802841]
gi|410003095|gb|EKO53544.1| tetratricopeptide repeat protein [Leptospira kirschneri str.
200802841]
Length = 1197
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 30/169 (17%), Positives = 72/169 (42%), Gaps = 23/169 (13%)
Query: 135 REEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADI 194
R+ ++ +TG + K P + ++H+ +G+++ + + ++ +++++ L D
Sbjct: 688 RKGEIDKAETGFKEILTKKPDSYYSHYQMGIIHLQRKKYEASIDAFDRS----LLLNKDF 743
Query: 195 ARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTL 254
+ + ++H S +K+L EE E + Q D + +
Sbjct: 744 VAARIGKGISLYH------------SGNKKLAKEEFEA-------ATQQDAANELAPYNI 784
Query: 255 GLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAK 303
G+IL +I + ++ +P D + Y++ GD+EQ+ K
Sbjct: 785 GIILFNDNLYNEAIGIFKEIIQKNPEFSDAHYQISYIYYKRGDLEQAEK 833
>gi|158333792|ref|YP_001514964.1| hypothetical protein AM1_0600 [Acaryochloris marina MBIC11017]
gi|158304033|gb|ABW25650.1| TPR repeat-containing protein [Acaryochloris marina MBIC11017]
Length = 367
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 60/293 (20%), Positives = 114/293 (38%), Gaps = 46/293 (15%)
Query: 155 KNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLPE 214
KNA+ H+ LG LGQ +A ++Y+K E+ ++ E L+++
Sbjct: 109 KNANFHYALGYSLGNLGQNDQAAAAYQKVIEL---EPKNVRAYEGLAVIYSRQ------- 158
Query: 215 SSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSL 274
++ +E ++ ++ + + +N++GLI LK +++ +++ L
Sbjct: 159 -------------QKYDEAFQNFQKVIEINPKNGGAYNSIGLIHLKRNQVEPAVTNLEKA 205
Query: 275 LAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVL 334
+ P N + NL +AY G E+ + D +P + + G +L
Sbjct: 206 ATLSPKNGEIQMNLALAYAAQGKTEEGLVALDKAVKLDPRNPK--------VHLRTGQLL 257
Query: 335 AGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCL 394
G N A+ K+ AL+ D L + GD +
Sbjct: 258 QSQGNNE---------RAITAYKQ----ALRHDKNLGAAHEGLGDVLMQKGDALGAVVAF 304
Query: 395 EKAAKLEPNCMSTRYAVAVSRIKDAERSQEPTEQLSWAGNEMASILREGDPVQ 447
+A KLE S Y +A + I R +E +L A ++ + R+ D V+
Sbjct: 305 RQATKLEKRNPSAFYKLAKALIAR-NRHREAIPELHKA-RQLYQLQRQADGVK 355
>gi|418684409|ref|ZP_13245594.1| tetratricopeptide repeat protein [Leptospira kirschneri serovar
Grippotyphosa str. Moskva]
gi|418740744|ref|ZP_13297121.1| tetratricopeptide repeat protein [Leptospira kirschneri serovar
Valbuzzi str. 200702274]
gi|410741108|gb|EKQ85821.1| tetratricopeptide repeat protein [Leptospira kirschneri serovar
Grippotyphosa str. Moskva]
gi|410752121|gb|EKR09097.1| tetratricopeptide repeat protein [Leptospira kirschneri serovar
Valbuzzi str. 200702274]
Length = 1197
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 29/169 (17%), Positives = 72/169 (42%), Gaps = 23/169 (13%)
Query: 135 REEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADI 194
R+ ++ +TG + K P + ++H+ +G+++ + + ++ +++++ L D
Sbjct: 688 RKGEIDKAETGFKEILTKKPDSYYSHYQMGIIHLQRKKYEASIDAFDRS----LLLNKDF 743
Query: 195 ARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTL 254
+ + ++H SG+ L KE + + + Q D + +
Sbjct: 744 VAARIGKGISLYH--------SGNKKLAKE-----------EFEAATQQDAANELAPYNI 784
Query: 255 GLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAK 303
G+IL +I + ++ +P D + Y++ GD+EQ+ K
Sbjct: 785 GIILFNDNLYNEAIGIFKEIIQKNPEFSDAHYQISYIYYKRGDLEQAEK 833
>gi|421129477|ref|ZP_15589677.1| tetratricopeptide repeat protein [Leptospira kirschneri str.
2008720114]
gi|410358852|gb|EKP05961.1| tetratricopeptide repeat protein [Leptospira kirschneri str.
2008720114]
Length = 1197
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 29/169 (17%), Positives = 72/169 (42%), Gaps = 23/169 (13%)
Query: 135 REEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADI 194
R+ ++ +TG + K P + ++H+ +G+++ + + ++ +++++ L D
Sbjct: 688 RKGEIDKAETGFKEILTKKPDSYYSHYQMGIIHLQRKKYEASIDAFDRS----LLLNKDF 743
Query: 195 ARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTL 254
+ + ++H SG+ L KE + + + Q D + +
Sbjct: 744 VAARIGKGISLYH--------SGNKKLAKE-----------EFEAATQQDAANELAPYNI 784
Query: 255 GLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAK 303
G+IL +I + ++ +P D + Y++ GD+EQ+ K
Sbjct: 785 GIILFNDNLYNEAIGIFKEIIQKNPEFSDAHYQISYIYYKRGDLEQAEK 833
>gi|345791944|ref|XP_543747.3| PREDICTED: transmembrane and TPR repeat-containing protein 1 [Canis
lupus familiaris]
Length = 876
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 74/335 (22%), Positives = 136/335 (40%), Gaps = 48/335 (14%)
Query: 228 EELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGN 287
E+ EE ++ LK+S+Q A +++L +L + R + + + + + P++ D N
Sbjct: 556 EKKEEAITLLKDSIQYGPEFADAYSSLASLLAEQERFKEAEEIYQAGIKNCPDSSDLHNN 615
Query: 288 LGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACL 347
G+ +G E++ +Q I +H A++N G + G
Sbjct: 616 YGVFLVDTGSPEKAVAHYQQAIALSPSHHVAMVN--------LGRLYRSLG--------- 658
Query: 348 DQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPNCMST 407
D ++A K L A KA+ I + L YY TG + + + +AA L+P+
Sbjct: 659 DNSAAEEWYKRALQVARKAE-----ILSPLGALYYNTGRYEEALQIYREAAALQPSQREL 713
Query: 408 RYAVA-----VSRIKDAERS-----QEPTEQLSWAGNEMASILREGDPVQIEPPIAWAGF 457
R A+A + + K+AE+ E T L +++I + + +
Sbjct: 714 RLALAQVLAVMGQTKEAEKMTNHIVSEETGCLE-CYRLLSAIYSKQEHHDKALDVIDKAL 772
Query: 458 AAVQKTHHEVAAAFETEENELSKMEECAGAGESAFLDQASAVNVAKECLLAALKADPKAA 517
K V+ F T+ N+L E LD+A E AA++ +P A
Sbjct: 773 QLKPKDPKVVSELFFTKGNQLR---------EQNLLDKAF------ESYKAAVELNPDQA 817
Query: 518 HIWANLANAYYLTGDHRSSGKCLEKVLMVYCSSNL 552
W N+ ++ G++ S+ E+ L + S L
Sbjct: 818 QAWMNMGGIQHIKGNYVSARAYYERALQLVPDSKL 852
>gi|333982415|ref|YP_004511625.1| hypothetical protein [Methylomonas methanica MC09]
gi|333806456|gb|AEF99125.1| Tetratricopeptide TPR_2 repeat-containing protein [Methylomonas
methanica MC09]
Length = 789
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 41/70 (58%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
+L++ L ++ +++ D+ AV W++ G LLK GRL +IS L + +DP + NL
Sbjct: 614 DLQKALVYIERALKIDSSSAVNWSSKGYALLKLGRLPEAISTLETATNLDPQFANAWINL 673
Query: 289 GIAYFQSGDM 298
G A +S ++
Sbjct: 674 GEAQMRSNNL 683
>gi|428778317|ref|YP_007170104.1| hypothetical protein PCC7418_3786 [Halothece sp. PCC 7418]
gi|428692596|gb|AFZ45890.1| Tetratricopeptide TPR_1 repeat-containing protein [Halothece sp.
PCC 7418]
Length = 388
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 70/161 (43%), Gaps = 17/161 (10%)
Query: 155 KNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEI---LLRCEADIARPEL---LSLVQIHHA 208
K A++ GL YQR G +KA + ++A ++ L+ +A +L L H+
Sbjct: 96 KYERAYYQRGLTYQRQGNLIKAFADIQRALQLNDRFLQPRQAMAYRKLARELKRAIAHNQ 155
Query: 209 QCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSI 268
+ ++ G+ L + ++++ A +N GL + G L ++
Sbjct: 156 RGIIRAQKGN-----------LAGAIEDFDQALEYLGNDAATYNKRGLAYAQQGNLDQAL 204
Query: 269 SVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLI 309
+ +++ ++ N GIAYFQ G++E + FQ I
Sbjct: 205 ADFEEAISLAKDSALAYKNRGIAYFQKGELEAALSDFQQAI 245
Score = 39.7 bits (91), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 40/73 (54%)
Query: 229 ELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNL 288
ELE LS +++++ A ++ G+I + G+L+++I+ L + N + NL
Sbjct: 233 ELEAALSDFQQAIKLKPEDASLYYKQGVIYHQQGKLEAAINTYQKALDRNENVWQAVNNL 292
Query: 289 GIAYFQSGDMEQS 301
G+ +Q G++ Q+
Sbjct: 293 GLIAYQQGNISQA 305
>gi|15679902|ref|NP_275211.1| hypothetical protein MTH68, partial [Methanothermobacter
thermautotrophicus str. Delta H]
Length = 228
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 63/172 (36%), Gaps = 21/172 (12%)
Query: 231 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 290
EE L + +Q + + WN GL+ + GR S+ L ++P + N G+
Sbjct: 52 EEALKCYDKVLQLNPQDDKAWNNKGLVFNELGRYDESLECYEKALQINPKLAEAWNNKGV 111
Query: 291 AYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQA 350
+ G E++ +C++ + D N +G L++
Sbjct: 112 VLSELGRYEEALECYEKALEIDPEDDKTWNN---------------------KGLVLEEL 150
Query: 351 SAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 402
A EC AL+ +P+ A W S KC +KA KL P
Sbjct: 151 GKYKDALECFQKALEINPEFADAWKWKGIILEDLKKPEESLKCYKKALKLNP 202
>gi|403332843|gb|EJY65472.1| hypothetical protein OXYTRI_14373 [Oxytricha trifallax]
gi|403342540|gb|EJY70594.1| hypothetical protein OXYTRI_08544 [Oxytricha trifallax]
Length = 644
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 77/195 (39%), Gaps = 41/195 (21%)
Query: 152 KMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEI-------LL----RCEADIARPE-- 198
K P+NA A L+G +YQ Q A+ +++KA EI LL C ++ + E
Sbjct: 380 KNPENAEAWRLMGQLYQENDQDELAILAFKKAYEIDPYDLDSLLCLGVSCTNELEQQEAI 439
Query: 199 --LLSLVQIHHAQCLLPESSGDN-SLDKELEPEE-------------------------L 230
L S ++ H LP DN +LD+ E E
Sbjct: 440 KHLHSYLKYHPEYSQLPNIQSDNLTLDEVHEAYEKAYQLNSKDSNLCLAMGVLAFIRRQF 499
Query: 231 EEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGI 290
+E ++ + ++ + +WN G L + + +I V + L + PN + N+G+
Sbjct: 500 QEAITHFQNGIRENPTDHTLWNKYGAALANNTDIDQAIQVYQTALDLRPNYVRTLANIGL 559
Query: 291 AYFQSGDMEQSAKCF 305
A E+S F
Sbjct: 560 AMRNRFKFEESVPYF 574
>gi|427707002|ref|YP_007049379.1| hypothetical protein Nos7107_1588 [Nostoc sp. PCC 7107]
gi|427359507|gb|AFY42229.1| Tetratricopeptide TPR_1 repeat-containing protein [Nostoc sp. PCC
7107]
Length = 481
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 66/165 (40%), Gaps = 21/165 (12%)
Query: 238 KESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGD 297
++++ + A V + LG+ L + G + +I +A+ PN+ NLG+ + Q G+
Sbjct: 62 RQALAINPALASVHSNLGIALKQQGLWKEAIQHYQEAIALQPNSAQFHYNLGLVFQQLGN 121
Query: 298 MEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAGANTGEGACLDQASAVNVAK 357
+E + ++ + N+P A N +LL Q V A
Sbjct: 122 LESAKDSYRQATILQPNYPLAYNNLGLVLL---------------------QIGEVEAAI 160
Query: 358 ECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 402
C A++ P A NLA A L+GD E ++ P
Sbjct: 161 TCYKTAIELQPDFAEAHQNLAEALLLSGDFDLGFAAYEWRWRMFP 205
>gi|374575450|ref|ZP_09648546.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Bradyrhizobium sp. WSM471]
gi|374423771|gb|EHR03304.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Bradyrhizobium sp. WSM471]
Length = 746
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 34/74 (45%)
Query: 254 LGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQ 313
LGL GRL+ + +L A+DP + D GNLG YF + + C + I
Sbjct: 63 LGLRAYDGGRLEEAQQLLECATALDPRSPDAHGNLGAVYFNLQKFQDARACQEKAIALKP 122
Query: 314 NHPAALINYAALLL 327
N P AL N LL
Sbjct: 123 NSPIALTNLGNTLL 136
>gi|348538370|ref|XP_003456665.1| PREDICTED: tetratricopeptide repeat protein 13 [Oreochromis
niloticus]
Length = 826
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 48/105 (45%), Gaps = 1/105 (0%)
Query: 234 LSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYF 293
+ ++S++ Q + GL G L+ +I L + + D +LG AY
Sbjct: 235 MEDFQQSLELKKNQPIAMLYKGLTFFHRGMLKEAIETFKEALKLKSDFIDAYKSLGQAYR 294
Query: 294 QSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSVLAGAG 338
+ GD E + + FQ ++ +QNH +L ++L +GS+ G
Sbjct: 295 ELGDFESAMESFQKALMLNQNHIQSL-QLRGMMLYHHGSLQEAIG 338
>gi|46581674|ref|YP_012482.1| hypothetical protein DVU3272 [Desulfovibrio vulgaris str.
Hildenborough]
gi|120601167|ref|YP_965567.1| hypothetical protein Dvul_0116 [Desulfovibrio vulgaris DP4]
gi|387154870|ref|YP_005703806.1| hypothetical protein Deval_3027 [Desulfovibrio vulgaris RCH1]
gi|46451097|gb|AAS97742.1| TPR domain protein [Desulfovibrio vulgaris str. Hildenborough]
gi|120561396|gb|ABM27140.1| Tetratricopeptide TPR_2 repeat protein [Desulfovibrio vulgaris DP4]
gi|311235314|gb|ADP88168.1| Tetratricopeptide TPR_1 repeat-containing protein [Desulfovibrio
vulgaris RCH1]
Length = 207
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 46/99 (46%)
Query: 225 LEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDC 284
L+ +LE L +E+ QS + V W+ +G + L+ G + +I+ L L P+
Sbjct: 71 LQRGDLEGCLRYNEEAAQSRPKFPVAWSNIGFVHLQRGEPEKAIAALKKALKWQPDFIQA 130
Query: 285 IGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYA 323
+ +G A++ GD E + I K+ + A N A
Sbjct: 131 MATMGAAFYMEGDYEACINISNEAIKKEPSFGPAYNNLA 169
Score = 38.9 bits (89), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 49/90 (54%), Gaps = 5/90 (5%)
Query: 225 LEPEELEEILSKLKESM--QSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNC 282
L+ E E+ ++ LK+++ Q D QA+ T+G G ++ I++ + + +P+
Sbjct: 105 LQRGEPEKAIAALKKALKWQPDFIQAMA--TMGAAFYMEGDYEACINISNEAIKKEPSFG 162
Query: 283 DCIGNLGIAYFQSGDMEQSAKCFQDLILKD 312
NL +AYF+ GD +S K F DL +++
Sbjct: 163 PAYNNLALAYFELGDFAKSVK-FADLAMEN 191
>gi|398340751|ref|ZP_10525454.1| hypothetical protein LkirsB1_15998 [Leptospira kirschneri serovar
Bim str. 1051]
Length = 1197
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 29/169 (17%), Positives = 72/169 (42%), Gaps = 23/169 (13%)
Query: 135 REEKVSSLKTGLVHVARKMPKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADI 194
R+ ++ +TG + K P + ++H+ +G+++ + + ++ +++++ L D
Sbjct: 688 RKGEIDKAETGFKEILTKKPDSYYSHYQMGIIHLQRKKYEASIDAFDRS----LLLNKDF 743
Query: 195 ARPELLSLVQIHHAQCLLPESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTL 254
+ + ++H SG+ L KE + + + Q D + +
Sbjct: 744 VAARIGKGISLYH--------SGNKKLAKE-----------EFEAATQQDAANELAPYNI 784
Query: 255 GLILLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAK 303
G+IL +I + ++ +P D + Y++ GD+EQ+ K
Sbjct: 785 GIILFNDNLYNEAIGIFKEIIQKNPEFSDAHYQISYIYYKRGDLEQAEK 833
>gi|383791910|ref|YP_005476484.1| hypothetical protein [Spirochaeta africana DSM 8902]
gi|383108444|gb|AFG38777.1| tetratricopeptide repeat protein [Spirochaeta africana DSM 8902]
Length = 451
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 72/179 (40%), Gaps = 26/179 (14%)
Query: 226 EPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSLLAVDPNNCDCI 285
+PE EE+LS + +Q Q +L LI G S +L +A DP D
Sbjct: 78 QPEAAEELLSSV---LQEAPEQPQALYSLALIQNSRGDRARSRELLEQAVAADPEYADAH 134
Query: 286 GNLGIAYFQSGDMEQSAKCFQDLI-LKDQNHPAALINYAALLLCKYGSVLAGAGANTGEG 344
LG +S + + FQ + L +QN A G G
Sbjct: 135 AALGEILLESRSPRGARRAFQTAVELDEQNFVA----------------------RVGLG 172
Query: 345 ACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEPN 403
L Q A++ L A++ +P+ WA+ A A TG++R + L +A +L+P+
Sbjct: 173 NALLQLQEYESAEQELTEAVELEPEYPFGWADRARARIGTGNNRGAIDDLTQAIQLQPD 231
>gi|392377848|ref|YP_004985007.1| conserved protein of unknown function [Azospirillum brasilense
Sp245]
gi|356879329|emb|CCD00241.1| conserved protein of unknown function [Azospirillum brasilense
Sp245]
Length = 624
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 63/158 (39%), Gaps = 13/158 (8%)
Query: 258 LLKSGRLQSSISVLSSLLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPA 317
L +GRL +I ++LAV+P D + LG A F +G + + D + H A
Sbjct: 41 LYGAGRLTEAIDACRAVLAVEPGRFDALNLLGAALFSTGQDGAAREALCDAVRIAPGHAA 100
Query: 318 ALINYAALLLCKYGSVLA-------------GAGANTGEGACLDQASAVNVAKECLLAAL 364
AL N +L + A A + G + ++ + LL A
Sbjct: 101 ALTNLCIVLQHRRDWPAAARALRTLAAVQPESAAVCSRLGTVSQETGDLDASARFLLRAA 160
Query: 365 KADPKAAHIWANLANAYYLTGDHRSSGKCLEKAAKLEP 402
+ DP + W NL L GD ++ + L +A + P
Sbjct: 161 RLDPGPSVQWHNLGLIRMLAGDMAAASRDLRRAVAIAP 198
>gi|289549201|ref|YP_003474189.1| hypothetical protein Thal_1433 [Thermocrinis albus DSM 14484]
gi|289182818|gb|ADC90062.1| TPR repeat-containing protein [Thermocrinis albus DSM 14484]
Length = 638
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 71/159 (44%), Gaps = 17/159 (10%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 213
P++ A+F LG+ Y + GQ A+ +++KAE +R + L+ I++ +
Sbjct: 52 PRSVDAYFCLGIAYYKTGQLNLALENFKKAEAYAVRDD---------DLMYIYNWLGSVY 102
Query: 214 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 273
+S GD LD L L+K + + +A N + LI K G L ++S
Sbjct: 103 DSKGD--LDNALLYHSRSLDLAK---KLGNRKLEATQLNNIALIFDKKGELDKALSYYEE 157
Query: 274 LLAVDPNNCD---CIGNLGIAYFQSGDMEQSAKCFQDLI 309
L + N D N+ + Y + GD ++ + F+ I
Sbjct: 158 SLRLQTNELDKAPTYNNIAVIYDKKGDYTKAIEYFKKAI 196
>gi|218437459|ref|YP_002375788.1| hypothetical protein PCC7424_0454 [Cyanothece sp. PCC 7424]
gi|218170187|gb|ACK68920.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 7424]
Length = 357
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 58/269 (21%), Positives = 109/269 (40%), Gaps = 46/269 (17%)
Query: 154 PKNAHAHFLLGLMYQRLGQPLKAVSSYEKAEEILLRCEADIARPELLSLVQIHHAQCLLP 213
P A+ GL Y L Q +A + Y +A + D PE + + LL
Sbjct: 64 PNYTQAYTKRGLTYYHLKQYQEAFNDYNRA------VQLDAKFPEAYTY------RGLLR 111
Query: 214 ESSGDNSLDKELEPEELEEILSKLKESMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSS 273
+ G++ L+ +++ + A +N G+ L Q++I +
Sbjct: 112 HALGNDI-----------GALTDYNRAIEIKSNYAEAYNYRGVSHLALSDHQNAIKDYTQ 160
Query: 274 LLAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYGSV 333
+A++P + N G+A+ +GD ++ + + I D N+ A N + + G
Sbjct: 161 AIALNPKYAEAYNNRGVAHSIAGDYAKAMEDYSKAIQLDSNYTQAYKN-RGITKAQLGEY 219
Query: 334 LAGAGANTGEGACLDQASAVNVAKECLLAALKADPKAAHIWANLANAYYLTGDHRSSGKC 393
LA A +D AL+ D + + I+ N AYY +++ +
Sbjct: 220 LA---------AIIDYNH-----------ALELDSQDSSIYYNRGIAYYQLKEYQKAIAD 259
Query: 394 LEKAAKLEPNCMSTRYAVAVSR--IKDAE 420
+ K +PN +T ++ AV+R +KDA+
Sbjct: 260 YSEVIKRDPNSPNTYFSRAVARQQLKDAQ 288
>gi|402860865|ref|XP_003894838.1| PREDICTED: PEX5-related protein isoform 1 [Papio anubis]
Length = 626
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 86/235 (36%), Gaps = 53/235 (22%)
Query: 227 PEELEEILSKLKE------------SMQSDTRQAVVWNTLGLILLKSGRLQSSISVLSSL 274
P EE L +LKE ++ D A W LG+ ++ Q++I L
Sbjct: 327 PGAFEEGLKRLKEGDLPVTILFMEAAILQDPGDAEAWQFLGITQAENENEQAAIVALQRC 386
Query: 275 LAVDPNNCDCIGNLGIAYFQSGDMEQSAKCFQDLILKDQNHPAALINYAALLLCKYG--- 331
L + PNN + L ++Y +G + + + ++ I + +P Y L+ K G
Sbjct: 387 LELQPNNLKALMALAVSYTNTGHQQDACEALKNWI---KQNP----KYKYLVKSKKGSPG 439
Query: 332 ------------SVLAGAGA-----------------NTGEGACLDQASAVNVAKECLLA 362
SVL G TG G + N A + A
Sbjct: 440 LTRRMSKSPVDSSVLEGVKELYLEAAHQNGDMIDPDLQTGLGVLFHLSGEFNRAIDAFNA 499
Query: 363 ALKADPKAAHIWANLANAYYLTGDHRSSG-KCLEKAAKLEPNCMSTRYAVAVSRI 416
AL P+ +W L A GD + +A +++P + +RY + +S I
Sbjct: 500 ALTVRPEDYSLWNRLG-ATLANGDRSEEAVEAYTRALEIQPGFIRSRYNLGISCI 553
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.312 0.127 0.358
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,112,562,732
Number of Sequences: 23463169
Number of extensions: 317204490
Number of successful extensions: 928038
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1758
Number of HSP's successfully gapped in prelim test: 3284
Number of HSP's that attempted gapping in prelim test: 893715
Number of HSP's gapped (non-prelim): 28490
length of query: 552
length of database: 8,064,228,071
effective HSP length: 148
effective length of query: 404
effective length of database: 8,886,646,355
effective search space: 3590205127420
effective search space used: 3590205127420
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 80 (35.4 bits)