Query 008820
Match_columns 552
No_of_seqs 953 out of 4481
Neff 10.5
Searched_HMMs 46136
Date Thu Mar 28 16:59:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008820.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/008820hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0271 Notchless-like WD40 re 100.0 3.9E-44 8.4E-49 322.3 26.3 312 210-535 106-479 (480)
2 KOG0271 Notchless-like WD40 re 100.0 6.4E-44 1.4E-48 320.9 25.6 290 246-550 109-451 (480)
3 PLN00181 protein SPA1-RELATED; 100.0 4.7E-41 1E-45 364.9 42.2 279 248-536 479-792 (793)
4 KOG0272 U4/U6 small nuclear ri 100.0 1.3E-40 2.8E-45 303.6 23.8 274 250-535 173-458 (459)
5 KOG0272 U4/U6 small nuclear ri 100.0 2.2E-38 4.7E-43 289.1 22.7 267 216-490 172-458 (459)
6 KOG0285 Pleiotropic regulator 100.0 4.2E-36 9.1E-41 268.4 27.8 282 247-539 146-441 (460)
7 KOG0281 Beta-TrCP (transducin 100.0 7.1E-38 1.5E-42 278.6 16.3 275 250-538 195-478 (499)
8 KOG0286 G-protein beta subunit 100.0 4.9E-35 1.1E-39 255.2 31.5 279 246-535 49-343 (343)
9 KOG0313 Microtubule binding pr 100.0 2.2E-35 4.7E-40 266.0 29.4 358 144-538 20-419 (423)
10 KOG0315 G-protein beta subunit 100.0 3.9E-35 8.5E-40 250.0 28.9 278 262-551 10-301 (311)
11 KOG0279 G protein beta subunit 100.0 3.6E-34 7.7E-39 248.4 31.1 286 243-537 6-313 (315)
12 KOG0281 Beta-TrCP (transducin 100.0 2.7E-36 5.9E-41 268.5 14.9 255 230-495 206-480 (499)
13 KOG0286 G-protein beta subunit 100.0 3.7E-33 8.1E-38 243.4 29.2 265 219-490 55-343 (343)
14 KOG0295 WD40 repeat-containing 100.0 8.3E-34 1.8E-38 254.5 24.6 280 245-536 101-405 (406)
15 KOG0284 Polyadenylation factor 100.0 2.9E-34 6.3E-39 260.9 18.2 283 251-545 95-388 (464)
16 KOG0273 Beta-transducin family 100.0 1.2E-32 2.6E-37 254.8 28.7 299 222-537 181-523 (524)
17 KOG0645 WD40 repeat protein [G 100.0 8.8E-32 1.9E-36 232.5 31.4 288 242-537 4-311 (312)
18 KOG0316 Conserved WD40 repeat- 100.0 1.7E-32 3.8E-37 232.0 25.3 281 241-536 6-298 (307)
19 KOG0282 mRNA splicing factor [ 100.0 3.7E-34 8E-39 265.9 15.1 281 242-535 204-503 (503)
20 KOG0279 G protein beta subunit 100.0 9E-32 1.9E-36 233.5 27.9 253 283-546 6-270 (315)
21 KOG0265 U5 snRNP-specific prot 100.0 6.5E-32 1.4E-36 236.6 25.9 278 242-535 37-336 (338)
22 KOG0291 WD40-repeat-containing 100.0 9.2E-31 2E-35 255.2 36.4 312 216-538 186-551 (893)
23 KOG0318 WD40 repeat stress pro 100.0 1.3E-30 2.8E-35 244.5 35.6 309 232-549 161-572 (603)
24 KOG0319 WD40-repeat-containing 100.0 3.7E-32 8.1E-37 264.5 24.8 326 218-551 104-590 (775)
25 KOG0295 WD40 repeat-containing 100.0 1.1E-31 2.3E-36 241.1 24.5 265 219-491 108-405 (406)
26 KOG0319 WD40-repeat-containing 100.0 3.4E-31 7.4E-36 257.9 28.9 283 243-536 314-618 (775)
27 KOG0296 Angio-associated migra 100.0 4.6E-31 1E-35 237.1 27.4 293 244-550 56-368 (399)
28 KOG0265 U5 snRNP-specific prot 100.0 6.9E-31 1.5E-35 230.2 26.6 266 219-490 47-336 (338)
29 KOG0263 Transcription initiati 100.0 4.9E-31 1.1E-35 259.5 26.7 231 218-456 377-651 (707)
30 KOG0263 Transcription initiati 100.0 2E-31 4.3E-36 262.3 23.8 248 239-494 365-651 (707)
31 KOG0274 Cdc4 and related F-box 100.0 1.3E-30 2.9E-35 262.3 28.7 280 251-546 207-490 (537)
32 KOG0266 WD40 repeat-containing 100.0 4.5E-30 9.7E-35 259.7 32.8 283 246-537 152-454 (456)
33 KOG0315 G-protein beta subunit 100.0 1.4E-29 3.1E-34 216.2 30.0 261 232-502 11-298 (311)
34 KOG0284 Polyadenylation factor 100.0 6.2E-32 1.3E-36 245.9 16.5 266 218-492 95-380 (464)
35 KOG0293 WD40 repeat-containing 100.0 1.5E-30 3.1E-35 237.1 24.8 279 246-538 218-514 (519)
36 cd00200 WD40 WD40 domain, foun 100.0 3.4E-29 7.3E-34 239.9 35.5 277 246-535 3-289 (289)
37 KOG0296 Angio-associated migra 100.0 3.6E-29 7.9E-34 225.0 30.2 307 220-537 65-398 (399)
38 KOG0291 WD40-repeat-containing 100.0 1.4E-28 3E-33 240.1 36.0 311 220-539 266-614 (893)
39 KOG0273 Beta-transducin family 100.0 9.7E-29 2.1E-33 229.1 30.7 269 214-492 230-523 (524)
40 KOG0292 Vesicle coat complex C 100.0 1.3E-29 2.9E-34 250.8 26.3 282 247-541 4-325 (1202)
41 KOG1407 WD40 repeat protein [F 100.0 2.8E-29 6E-34 215.9 23.6 268 246-528 14-293 (313)
42 KOG0645 WD40 repeat protein [G 100.0 2E-28 4.3E-33 211.9 28.3 260 222-492 17-311 (312)
43 KOG0274 Cdc4 and related F-box 100.0 3.5E-29 7.6E-34 252.1 27.4 239 248-500 245-490 (537)
44 KOG0276 Vesicle coat complex C 100.0 1.5E-28 3.3E-33 234.9 29.1 259 222-487 16-294 (794)
45 PLN00181 protein SPA1-RELATED; 100.0 5.5E-28 1.2E-32 262.9 37.7 266 218-491 482-792 (793)
46 KOG0268 Sof1-like rRNA process 100.0 2.8E-30 6E-35 231.7 16.0 274 245-537 59-345 (433)
47 KOG0276 Vesicle coat complex C 100.0 6.7E-29 1.4E-33 237.3 25.7 274 247-533 8-295 (794)
48 KOG0277 Peroxisomal targeting 100.0 1.3E-28 2.8E-33 211.0 23.3 268 256-536 12-308 (311)
49 KOG0266 WD40 repeat-containing 100.0 4.1E-28 8.8E-33 245.5 31.2 267 220-492 160-454 (456)
50 KOG0306 WD40-repeat-containing 100.0 3E-27 6.5E-32 230.7 32.3 318 220-550 66-550 (888)
51 KOG0316 Conserved WD40 repeat- 100.0 5.8E-28 1.3E-32 204.7 23.7 262 220-490 18-297 (307)
52 KOG0285 Pleiotropic regulator 100.0 1.2E-28 2.6E-33 220.8 20.1 242 282-537 141-389 (460)
53 KOG0318 WD40 repeat stress pro 100.0 1.8E-26 3.9E-31 216.8 35.5 313 212-537 52-392 (603)
54 KOG0278 Serine/threonine kinas 100.0 1.1E-28 2.4E-33 210.7 18.6 277 247-538 9-298 (334)
55 KOG0293 WD40 repeat-containing 100.0 3.5E-28 7.5E-33 221.7 22.6 269 218-493 223-514 (519)
56 KOG0306 WD40-repeat-containing 100.0 4.7E-27 1E-31 229.3 30.7 329 212-551 100-635 (888)
57 KOG0282 mRNA splicing factor [ 100.0 3.2E-28 6.9E-33 226.6 20.6 267 218-490 213-503 (503)
58 KOG0292 Vesicle coat complex C 100.0 3.6E-27 7.8E-32 233.7 29.1 262 221-491 11-320 (1202)
59 KOG0640 mRNA cleavage stimulat 100.0 9E-28 1.9E-32 211.3 21.7 284 246-537 106-426 (430)
60 KOG0313 Microtubule binding pr 100.0 1.2E-26 2.6E-31 209.8 25.9 254 231-492 115-418 (423)
61 KOG0275 Conserved WD40 repeat- 100.0 3.7E-28 8.1E-33 214.9 15.4 276 250-535 211-507 (508)
62 KOG0300 WD40 repeat-containing 100.0 9.3E-27 2E-31 205.5 23.4 301 232-538 125-477 (481)
63 KOG0294 WD40 repeat-containing 100.0 2E-26 4.2E-31 203.7 24.7 241 243-539 34-283 (362)
64 KOG0301 Phospholipase A2-activ 100.0 1.9E-26 4.1E-31 223.5 26.8 273 245-538 7-289 (745)
65 cd00200 WD40 WD40 domain, foun 100.0 1.7E-25 3.8E-30 214.1 33.5 263 220-490 10-289 (289)
66 KOG0277 Peroxisomal targeting 100.0 6.7E-27 1.4E-31 200.5 20.1 235 250-491 58-308 (311)
67 KOG0643 Translation initiation 100.0 5.2E-26 1.1E-30 196.5 25.5 284 247-539 5-319 (327)
68 PTZ00421 coronin; Provisional 100.0 6.5E-25 1.4E-29 221.2 36.5 271 262-539 32-333 (493)
69 PTZ00420 coronin; Provisional 99.9 7E-25 1.5E-29 221.7 34.5 248 268-522 50-319 (568)
70 KOG0278 Serine/threonine kinas 99.9 4.5E-27 9.7E-32 201.0 15.6 258 228-495 26-300 (334)
71 KOG0288 WD40 repeat protein Ti 99.9 8.6E-27 1.9E-31 212.9 16.3 276 245-535 168-459 (459)
72 KOG0288 WD40 repeat protein Ti 99.9 9.4E-27 2E-31 212.6 16.4 262 219-490 175-459 (459)
73 KOG0289 mRNA splicing factor [ 99.9 2.5E-25 5.5E-30 204.4 25.3 265 222-491 222-505 (506)
74 KOG0308 Conserved WD40 repeat- 99.9 5.1E-26 1.1E-30 218.9 21.2 306 229-537 35-393 (735)
75 KOG0275 Conserved WD40 repeat- 99.9 2.3E-26 5E-31 203.6 16.9 263 220-490 214-507 (508)
76 KOG0310 Conserved WD40 repeat- 99.9 3.1E-25 6.6E-30 207.2 25.2 267 252-536 26-308 (487)
77 KOG0643 Translation initiation 99.9 1.1E-24 2.4E-29 188.3 26.2 267 221-493 12-318 (327)
78 PTZ00421 coronin; Provisional 99.9 2.6E-24 5.5E-29 216.9 33.1 203 247-455 70-291 (493)
79 KOG1446 Histone H3 (Lys4) meth 99.9 8.1E-24 1.7E-28 187.9 31.3 279 248-538 10-304 (311)
80 KOG0299 U3 snoRNP-associated p 99.9 3.9E-25 8.5E-30 204.9 23.3 252 285-539 135-412 (479)
81 KOG0283 WD40 repeat-containing 99.9 4.1E-25 8.9E-30 219.8 24.3 280 246-537 260-576 (712)
82 KOG0283 WD40 repeat-containing 99.9 4E-25 8.6E-30 219.9 23.9 229 217-453 265-575 (712)
83 KOG0641 WD40 repeat protein [G 99.9 3.4E-23 7.3E-28 174.7 31.3 285 249-537 29-349 (350)
84 KOG0305 Anaphase promoting com 99.9 2.9E-24 6.2E-29 208.5 26.8 233 252-494 217-463 (484)
85 KOG0308 Conserved WD40 repeat- 99.9 2.3E-25 5E-30 214.4 18.1 279 250-538 19-328 (735)
86 KOG1539 WD repeat protein [Gen 99.9 1.9E-23 4.2E-28 206.6 31.6 297 232-537 173-648 (910)
87 PTZ00420 coronin; Provisional 99.9 1.3E-23 2.8E-28 212.6 31.2 223 244-472 66-314 (568)
88 KOG1036 Mitotic spindle checkp 99.9 8.3E-24 1.8E-28 186.9 25.9 261 252-527 13-294 (323)
89 KOG0772 Uncharacterized conser 99.9 1.8E-24 4E-29 202.8 21.9 270 220-489 168-484 (641)
90 KOG0973 Histone transcription 99.9 5.5E-24 1.2E-28 217.1 27.2 281 251-538 12-356 (942)
91 KOG0772 Uncharacterized conser 99.9 6.1E-24 1.3E-28 199.3 24.4 283 246-535 161-485 (641)
92 KOG0301 Phospholipase A2-activ 99.9 5E-24 1.1E-28 206.8 24.6 244 233-492 27-288 (745)
93 KOG0289 mRNA splicing factor [ 99.9 1.3E-23 2.9E-28 193.2 25.2 273 253-536 220-505 (506)
94 KOG0647 mRNA export protein (c 99.9 2E-23 4.4E-28 183.7 24.8 266 250-528 25-315 (347)
95 KOG0264 Nucleosome remodeling 99.9 4.7E-24 1E-28 197.8 21.9 253 238-494 110-406 (422)
96 KOG0639 Transducin-like enhanc 99.9 3E-24 6.5E-29 200.6 20.6 273 250-536 417-703 (705)
97 KOG1446 Histone H3 (Lys4) meth 99.9 2.2E-22 4.8E-27 178.8 31.1 269 218-494 13-305 (311)
98 KOG4283 Transcription-coupled 99.9 2.3E-23 4.9E-28 182.5 22.6 277 249-537 40-365 (397)
99 KOG0264 Nucleosome remodeling 99.9 9E-24 1.9E-28 196.0 21.0 242 290-538 122-405 (422)
100 KOG1332 Vesicle coat complex C 99.9 8.6E-24 1.9E-28 180.5 18.6 245 248-541 7-290 (299)
101 KOG2055 WD40 repeat protein [G 99.9 9.6E-23 2.1E-27 189.1 25.7 280 252-537 213-512 (514)
102 KOG0640 mRNA cleavage stimulat 99.9 7.2E-23 1.6E-27 180.6 23.2 268 220-492 113-426 (430)
103 KOG0647 mRNA export protein (c 99.9 5.8E-22 1.3E-26 174.5 27.2 257 215-480 23-311 (347)
104 KOG0310 Conserved WD40 repeat- 99.9 1.8E-22 3.9E-27 188.8 25.2 237 248-493 64-310 (487)
105 KOG0646 WD40 repeat protein [G 99.9 4.6E-23 1E-27 191.6 20.0 242 252-540 81-353 (476)
106 KOG1408 WD40 repeat protein [F 99.9 5.7E-22 1.2E-26 192.8 27.8 300 225-538 330-714 (1080)
107 KOG0299 U3 snoRNP-associated p 99.9 2.9E-22 6.3E-27 186.0 24.6 231 250-490 200-454 (479)
108 KOG0300 WD40 repeat-containing 99.9 1.9E-22 4E-27 178.5 21.9 264 222-494 151-478 (481)
109 KOG0305 Anaphase promoting com 99.9 4.1E-22 8.8E-27 193.6 26.4 265 258-538 183-462 (484)
110 KOG0641 WD40 repeat protein [G 99.9 7.6E-21 1.7E-25 160.6 29.9 264 221-492 34-349 (350)
111 KOG0321 WD40 repeat-containing 99.9 3.4E-22 7.3E-27 192.4 23.9 249 246-494 94-393 (720)
112 KOG0269 WD40 repeat-containing 99.9 1.5E-23 3.2E-28 205.9 14.0 233 255-493 90-341 (839)
113 KOG2096 WD40 repeat protein [G 99.9 8.7E-22 1.9E-26 174.5 23.7 282 245-535 79-400 (420)
114 KOG1332 Vesicle coat complex C 99.9 1.5E-22 3.3E-27 172.9 18.0 228 222-452 14-284 (299)
115 KOG2106 Uncharacterized conser 99.9 1.5E-20 3.3E-25 176.2 32.6 322 215-549 100-489 (626)
116 KOG1407 WD40 repeat protein [F 99.9 4.7E-21 1E-25 165.5 25.8 253 221-483 22-293 (313)
117 KOG0294 WD40 repeat-containing 99.9 1.1E-21 2.3E-26 173.9 22.0 218 228-455 50-282 (362)
118 KOG0270 WD40 repeat-containing 99.9 3.3E-22 7.2E-27 184.8 18.8 222 229-455 190-450 (463)
119 KOG0321 WD40 repeat-containing 99.9 1.2E-21 2.5E-26 188.7 22.9 273 262-542 64-396 (720)
120 KOG1036 Mitotic spindle checkp 99.9 1.1E-20 2.5E-25 167.1 27.3 257 216-482 10-294 (323)
121 KOG0269 WD40 repeat-containing 99.9 3.3E-22 7.1E-27 196.6 18.7 196 350-551 98-310 (839)
122 KOG1274 WD40 repeat protein [G 99.9 9.1E-21 2E-25 190.0 28.1 255 249-520 10-281 (933)
123 KOG0268 Sof1-like rRNA process 99.9 5.1E-22 1.1E-26 178.9 16.8 249 232-493 80-346 (433)
124 KOG0650 WD40 repeat nucleolar 99.9 1.1E-20 2.5E-25 180.6 24.0 286 245-534 393-732 (733)
125 TIGR03866 PQQ_ABC_repeats PQQ- 99.9 3.2E-19 6.9E-24 172.8 33.7 269 262-548 1-289 (300)
126 KOG0973 Histone transcription 99.9 4.5E-20 9.7E-25 188.8 26.3 269 218-494 12-357 (942)
127 KOG2445 Nuclear pore complex c 99.9 6.8E-20 1.5E-24 162.0 23.5 239 249-492 10-318 (361)
128 KOG0302 Ribosome Assembly prot 99.9 2E-20 4.3E-25 169.6 20.1 232 248-534 147-435 (440)
129 KOG4328 WD40 protein [Function 99.9 5.8E-20 1.3E-24 170.6 23.4 283 247-537 181-495 (498)
130 KOG1273 WD40 repeat protein [G 99.9 7.9E-20 1.7E-24 161.9 23.1 268 222-492 26-322 (405)
131 KOG0646 WD40 repeat protein [G 99.9 5E-20 1.1E-24 171.5 22.7 264 267-537 12-307 (476)
132 KOG4378 Nuclear protein COP1 [ 99.9 2.2E-20 4.9E-25 174.7 20.4 269 272-551 12-294 (673)
133 KOG1408 WD40 repeat protein [F 99.9 4.4E-20 9.6E-25 179.8 22.8 235 253-492 460-713 (1080)
134 KOG2048 WD40 repeat protein [G 99.9 7.6E-19 1.7E-23 170.8 31.3 279 249-537 22-319 (691)
135 KOG0270 WD40 repeat-containing 99.9 1.7E-20 3.7E-25 173.5 19.0 241 295-541 176-453 (463)
136 KOG1539 WD repeat protein [Gen 99.9 4E-18 8.6E-23 169.4 36.5 293 237-537 99-606 (910)
137 KOG1063 RNA polymerase II elon 99.9 1.8E-19 4E-24 175.3 26.3 281 249-537 264-699 (764)
138 KOG0267 Microtubule severing p 99.9 9.2E-22 2E-26 191.9 8.9 208 231-446 40-260 (825)
139 KOG2048 WD40 repeat protein [G 99.9 1.1E-18 2.3E-23 169.7 29.5 265 221-493 27-320 (691)
140 KOG2106 Uncharacterized conser 99.8 1.4E-17 3E-22 156.6 34.7 300 220-537 201-521 (626)
141 KOG0267 Microtubule severing p 99.8 3E-21 6.5E-26 188.4 10.4 218 248-520 24-249 (825)
142 KOG1273 WD40 repeat protein [G 99.8 8.4E-19 1.8E-23 155.5 24.1 269 255-537 26-322 (405)
143 KOG2096 WD40 repeat protein [G 99.8 8.3E-19 1.8E-23 155.7 23.0 245 286-538 80-361 (420)
144 KOG4378 Nuclear protein COP1 [ 99.8 9.7E-20 2.1E-24 170.5 18.0 204 262-473 91-302 (673)
145 KOG2445 Nuclear pore complex c 99.8 9E-19 2E-23 154.9 23.1 245 289-537 10-318 (361)
146 TIGR03866 PQQ_ABC_repeats PQQ- 99.8 1.3E-17 2.8E-22 161.5 33.8 249 244-502 23-289 (300)
147 KOG0649 WD40 repeat protein [G 99.8 3.8E-18 8.3E-23 146.0 25.9 269 255-535 13-314 (325)
148 KOG4283 Transcription-coupled 99.8 1.5E-18 3.2E-23 152.6 23.9 204 289-495 40-279 (397)
149 KOG1034 Transcriptional repres 99.8 1.3E-18 2.8E-23 155.3 22.5 282 248-536 34-382 (385)
150 KOG0307 Vesicle coat complex C 99.8 8.7E-20 1.9E-24 187.5 15.7 264 269-540 36-330 (1049)
151 KOG1034 Transcriptional repres 99.8 6.2E-19 1.3E-23 157.3 18.3 241 250-492 87-383 (385)
152 KOG0639 Transducin-like enhanc 99.8 4E-19 8.6E-24 166.6 17.6 247 290-547 417-672 (705)
153 KOG1188 WD40 repeat protein [G 99.8 1.1E-18 2.4E-23 156.6 19.0 267 263-537 41-346 (376)
154 KOG0302 Ribosome Assembly prot 99.8 3.9E-19 8.4E-24 161.3 15.4 163 244-411 203-379 (440)
155 KOG1274 WD40 repeat protein [G 99.8 1.2E-17 2.7E-22 167.8 27.2 260 222-489 16-297 (933)
156 KOG0290 Conserved WD40 repeat- 99.8 2.1E-17 4.6E-22 145.2 24.3 283 242-527 35-356 (364)
157 KOG1063 RNA polymerase II elon 99.8 3.7E-17 7.9E-22 159.5 26.1 301 229-537 31-391 (764)
158 KOG0322 G-protein beta subunit 99.8 1.4E-18 3.1E-23 150.4 14.4 243 245-491 7-322 (323)
159 KOG1517 Guanine nucleotide bin 99.8 2.5E-17 5.4E-22 167.5 25.3 287 251-539 1063-1383(1387)
160 KOG0307 Vesicle coat complex C 99.8 8.6E-19 1.9E-23 180.3 13.5 235 254-495 66-330 (1049)
161 KOG2919 Guanine nucleotide-bin 99.8 8.2E-17 1.8E-21 143.5 22.9 260 254-521 51-352 (406)
162 KOG4328 WD40 protein [Function 99.8 3.1E-17 6.7E-22 152.6 20.1 257 277-537 171-450 (498)
163 KOG1334 WD40 repeat protein [G 99.8 7.2E-18 1.6E-22 158.0 14.0 283 246-536 136-465 (559)
164 KOG0303 Actin-binding protein 99.8 4.3E-17 9.4E-22 148.9 18.2 200 248-454 77-294 (472)
165 KOG0642 Cell-cycle nuclear pro 99.8 1.5E-17 3.2E-22 158.8 15.0 249 247-499 289-568 (577)
166 KOG0303 Actin-binding protein 99.7 1.1E-16 2.3E-21 146.4 18.8 245 287-537 76-337 (472)
167 KOG1009 Chromatin assembly com 99.7 9.2E-16 2E-20 141.0 24.5 279 252-538 13-373 (434)
168 COG2319 FOG: WD40 repeat [Gene 99.7 2.1E-14 4.6E-19 145.6 37.8 284 247-540 60-362 (466)
169 KOG1007 WD repeat protein TSSC 99.7 4.3E-16 9.4E-21 136.8 20.9 266 271-539 39-363 (370)
170 KOG4227 WD40 repeat protein [G 99.7 2.5E-16 5.3E-21 143.7 19.3 291 243-537 47-387 (609)
171 KOG1007 WD repeat protein TSSC 99.7 4E-16 8.7E-21 137.1 19.0 242 246-492 57-361 (370)
172 KOG1240 Protein kinase contain 99.7 2.9E-15 6.3E-20 155.0 26.7 254 238-493 1034-1335(1431)
173 KOG0591 NIMA (never in mitosis 99.7 3.3E-18 7.2E-23 150.7 4.3 113 12-162 165-282 (375)
174 COG2319 FOG: WD40 repeat [Gene 99.7 2.5E-13 5.5E-18 137.7 40.4 285 242-538 145-443 (466)
175 KOG2110 Uncharacterized conser 99.7 7.9E-14 1.7E-18 127.0 31.4 282 254-550 48-344 (391)
176 KOG2919 Guanine nucleotide-bin 99.7 6.8E-15 1.5E-19 131.4 22.9 258 223-482 53-360 (406)
177 KOG1587 Cytoplasmic dynein int 99.7 6.5E-15 1.4E-19 147.9 25.0 263 271-538 221-517 (555)
178 KOG0575 Polo-like serine/threo 99.7 1.4E-17 3E-22 162.4 5.3 109 14-161 157-269 (592)
179 KOG1538 Uncharacterized conser 99.7 2.9E-15 6.4E-20 145.5 20.3 264 254-537 14-293 (1081)
180 KOG2055 WD40 repeat protein [G 99.7 1.2E-14 2.7E-19 135.7 23.5 268 215-492 209-512 (514)
181 KOG0598 Ribosomal protein S6 k 99.7 1.5E-17 3.1E-22 153.1 3.4 99 18-154 170-270 (357)
182 KOG1538 Uncharacterized conser 99.7 6.8E-15 1.5E-19 143.0 21.1 244 234-492 35-293 (1081)
183 KOG1445 Tumor-specific antigen 99.7 1.4E-15 2.9E-20 147.0 15.5 232 311-549 599-856 (1012)
184 KOG1188 WD40 repeat protein [G 99.7 5E-15 1.1E-19 133.3 17.1 186 353-540 41-245 (376)
185 KOG0615 Serine/threonine prote 99.7 1.7E-17 3.8E-22 153.9 1.4 117 12-160 316-436 (475)
186 KOG0642 Cell-cycle nuclear pro 99.7 1.8E-15 3.9E-20 144.7 14.8 255 286-550 288-573 (577)
187 KOG4227 WD40 repeat protein [G 99.7 9.5E-15 2.1E-19 133.5 18.2 248 286-538 50-323 (609)
188 KOG0581 Mitogen-activated prot 99.6 6.7E-17 1.5E-21 148.8 4.1 109 18-161 224-335 (364)
189 KOG0644 Uncharacterized conser 99.6 8E-16 1.7E-20 153.0 11.6 227 221-454 192-468 (1113)
190 PRK11028 6-phosphogluconolacto 99.6 4.1E-13 8.9E-18 131.6 30.8 267 265-539 5-306 (330)
191 KOG0644 Uncharacterized conser 99.6 2.9E-16 6.2E-21 156.1 8.4 245 246-550 184-439 (1113)
192 KOG0649 WD40 repeat protein [G 99.6 7.8E-14 1.7E-18 119.9 22.0 229 295-538 13-275 (325)
193 KOG0650 WD40 repeat nucleolar 99.6 4.5E-14 9.8E-19 135.9 22.1 267 215-489 396-732 (733)
194 KOG0033 Ca2+/calmodulin-depend 99.6 6.4E-17 1.4E-21 139.8 2.6 107 18-159 158-265 (355)
195 KOG1963 WD40 repeat protein [G 99.6 1.5E-13 3.2E-18 138.5 26.4 282 249-538 202-539 (792)
196 KOG1517 Guanine nucleotide bin 99.6 4.4E-14 9.4E-19 144.3 22.0 245 294-541 1066-1337(1387)
197 KOG1963 WD40 repeat protein [G 99.6 2.4E-13 5.2E-18 137.0 26.1 308 222-537 208-583 (792)
198 KOG1240 Protein kinase contain 99.6 8.9E-14 1.9E-18 144.3 22.0 260 277-539 1034-1336(1431)
199 KOG1587 Cytoplasmic dynein int 99.6 1.4E-13 3E-18 138.4 22.6 241 251-494 241-518 (555)
200 KOG0616 cAMP-dependent protein 99.6 2.5E-16 5.5E-21 140.1 2.6 96 18-154 189-285 (355)
201 KOG0322 G-protein beta subunit 99.6 5.6E-14 1.2E-18 122.2 16.9 240 283-536 5-322 (323)
202 KOG2110 Uncharacterized conser 99.6 1.4E-12 3.1E-17 118.9 26.6 230 294-538 7-249 (391)
203 KOG1523 Actin-related protein 99.6 5.4E-13 1.2E-17 119.4 21.6 231 248-483 6-269 (361)
204 KOG0595 Serine/threonine-prote 99.6 7.1E-16 1.5E-20 143.4 2.5 114 8-157 148-264 (429)
205 KOG0596 Dual specificity; seri 99.6 2.5E-15 5.4E-20 144.6 6.0 120 18-160 504-626 (677)
206 smart00750 KIND kinase non-cat 99.6 3.2E-15 7E-20 132.4 5.9 99 36-165 65-169 (176)
207 KOG1445 Tumor-specific antigen 99.6 8.1E-14 1.8E-18 134.9 15.6 236 258-494 587-846 (1012)
208 KOG1310 WD40 repeat protein [G 99.6 5.3E-14 1.1E-18 134.1 14.1 163 246-410 44-231 (758)
209 KOG0605 NDR and related serine 99.6 1.5E-15 3.3E-20 145.9 3.2 90 32-154 345-435 (550)
210 KOG0589 Serine/threonine prote 99.6 1.5E-15 3.2E-20 146.1 3.0 110 15-161 146-258 (426)
211 KOG0694 Serine/threonine prote 99.6 1.7E-15 3.7E-20 149.8 3.5 100 18-155 513-613 (694)
212 KOG0599 Phosphorylase kinase g 99.5 1.4E-15 2.9E-20 133.7 2.3 120 12-160 160-282 (411)
213 KOG0597 Serine-threonine prote 99.5 2.3E-15 4.9E-20 145.1 3.8 103 18-158 145-248 (808)
214 TIGR03300 assembly_YfgL outer 99.5 2E-11 4.3E-16 122.1 32.3 280 240-534 83-376 (377)
215 TIGR03300 assembly_YfgL outer 99.5 2.6E-11 5.6E-16 121.2 32.3 275 258-549 61-349 (377)
216 KOG0290 Conserved WD40 repeat- 99.5 3.3E-13 7.2E-18 119.0 15.9 188 250-444 148-356 (364)
217 KOG0583 Serine/threonine prote 99.5 5.5E-15 1.2E-19 144.4 5.0 104 18-159 166-273 (370)
218 KOG0198 MEKK and related serin 99.5 3.6E-15 7.7E-20 139.8 3.5 116 13-162 156-277 (313)
219 KOG0201 Serine/threonine prote 99.5 3.6E-15 7.8E-20 139.9 3.4 106 18-161 156-263 (467)
220 KOG0578 p21-activated serine/t 99.5 3.4E-15 7.4E-20 144.7 2.7 110 14-161 408-523 (550)
221 KOG1009 Chromatin assembly com 99.5 1.5E-12 3.2E-17 120.2 19.6 233 218-452 12-370 (434)
222 KOG0192 Tyrosine kinase specif 99.5 1.2E-14 2.6E-19 140.7 6.1 119 13-166 182-304 (362)
223 KOG0771 Prolactin regulatory e 99.5 3.5E-12 7.6E-17 118.5 22.0 189 344-538 148-355 (398)
224 KOG0771 Prolactin regulatory e 99.5 3.3E-13 7.2E-18 125.2 15.1 192 256-453 148-353 (398)
225 KOG2111 Uncharacterized conser 99.5 2.4E-11 5.3E-16 108.9 25.2 233 294-540 7-259 (346)
226 PHA02988 hypothetical protein; 99.5 1E-14 2.2E-19 139.6 4.1 100 34-165 179-279 (283)
227 KOG1334 WD40 repeat protein [G 99.5 6E-13 1.3E-17 125.4 14.6 284 210-494 133-468 (559)
228 PRK11028 6-phosphogluconolacto 99.5 2.3E-10 5.1E-15 112.2 33.3 237 251-492 33-304 (330)
229 KOG0585 Ca2+/calmodulin-depend 99.5 2.3E-14 5E-19 135.7 4.3 100 30-161 270-372 (576)
230 KOG2111 Uncharacterized conser 99.5 6.6E-11 1.4E-15 106.2 25.6 176 272-457 75-259 (346)
231 KOG0588 Serine/threonine prote 99.5 2.8E-14 6.1E-19 140.4 4.6 96 31-161 167-263 (786)
232 KOG1272 WD40-repeat-containing 99.5 1.1E-13 2.4E-18 129.5 8.2 225 294-536 131-361 (545)
233 cd05102 PTKc_VEGFR3 Catalytic 99.5 3.5E-14 7.5E-19 140.0 5.2 120 13-166 212-335 (338)
234 PRK01742 tolB translocation pr 99.5 4.8E-12 1E-16 128.1 20.7 230 271-519 183-425 (429)
235 cd05585 STKc_YPK1_like Catalyt 99.5 3.3E-14 7.2E-19 138.3 4.3 113 14-164 132-247 (312)
236 KOG0592 3-phosphoinositide-dep 99.5 5E-14 1.1E-18 135.7 5.3 93 33-161 245-338 (604)
237 KOG1524 WD40 repeat-containing 99.5 7.1E-12 1.5E-16 119.5 19.4 256 250-533 12-282 (737)
238 KOG1524 WD40 repeat-containing 99.4 1.7E-12 3.6E-17 123.7 14.7 196 232-450 76-282 (737)
239 KOG3881 Uncharacterized conser 99.4 1.5E-11 3.4E-16 113.1 19.8 254 252-518 55-340 (412)
240 cd05602 STKc_SGK1 Catalytic do 99.4 7E-14 1.5E-18 136.9 4.6 92 32-159 153-245 (325)
241 cd05571 STKc_PKB Catalytic dom 99.4 5.9E-14 1.3E-18 137.2 3.8 87 32-154 152-239 (323)
242 KOG2321 WD40 repeat protein [G 99.4 1.7E-11 3.8E-16 117.9 20.3 243 290-540 49-346 (703)
243 KOG0983 Mitogen-activated prot 99.4 2.7E-14 5.8E-19 125.8 1.2 111 18-160 237-348 (391)
244 cd05631 STKc_GRK4 Catalytic do 99.4 6E-14 1.3E-18 134.7 3.8 107 14-155 141-250 (285)
245 cd05048 PTKc_Ror Catalytic Dom 99.4 8.9E-14 1.9E-18 133.4 4.6 112 18-164 169-282 (283)
246 KOG1272 WD40-repeat-containing 99.4 7.5E-13 1.6E-17 124.0 10.3 262 254-530 131-402 (545)
247 KOG0582 Ste20-like serine/thre 99.4 7.7E-14 1.7E-18 131.3 3.7 105 33-161 188-293 (516)
248 cd05575 STKc_SGK Catalytic dom 99.4 7.8E-14 1.7E-18 136.4 4.0 90 32-157 153-243 (323)
249 cd05106 PTKc_CSF-1R Catalytic 99.4 1.2E-13 2.6E-18 137.6 5.3 120 13-166 250-373 (374)
250 KOG0032 Ca2+/calmodulin-depend 99.4 5.6E-14 1.2E-18 137.2 2.7 113 13-160 177-292 (382)
251 cd05590 STKc_nPKC_eta Catalyti 99.4 8.9E-14 1.9E-18 135.7 4.0 90 32-157 153-243 (320)
252 cd05616 STKc_cPKC_beta Catalyt 99.4 9.4E-14 2E-18 135.8 4.0 88 32-155 158-246 (323)
253 KOG2394 WD40 protein DMR-N9 [G 99.4 4.7E-12 1E-16 120.8 15.1 192 262-474 185-384 (636)
254 cd05612 STKc_PRKX_like Catalyt 99.4 9.5E-14 2.1E-18 133.7 3.8 96 18-154 146-242 (291)
255 KOG0280 Uncharacterized conser 99.4 3.4E-11 7.3E-16 106.8 19.1 265 271-536 45-332 (339)
256 cd07868 STKc_CDK8 Catalytic do 99.4 2.3E-13 5E-18 132.9 6.3 76 2-91 139-218 (317)
257 PTZ00283 serine/threonine prot 99.4 1E-13 2.3E-18 142.6 3.9 113 13-161 181-297 (496)
258 PTZ00267 NIMA-related protein 99.4 1.2E-13 2.6E-18 142.1 4.0 113 13-160 207-322 (478)
259 cd05589 STKc_PKN Catalytic dom 99.4 1.6E-13 3.4E-18 134.3 4.6 89 32-156 158-247 (324)
260 cd07862 STKc_CDK6 Catalytic do 99.4 1.3E-13 2.8E-18 132.8 3.7 125 18-160 155-286 (290)
261 cd05592 STKc_nPKC_theta_delta 99.4 1.8E-13 3.9E-18 133.3 4.5 101 18-156 141-242 (316)
262 KOG4279 Serine/threonine prote 99.4 4.1E-14 8.9E-19 139.6 -0.1 113 14-160 715-831 (1226)
263 cd05603 STKc_SGK2 Catalytic do 99.4 1.7E-13 3.8E-18 133.9 4.3 89 32-156 153-242 (321)
264 cd05054 PTKc_VEGFR Catalytic d 99.4 2.3E-13 5E-18 133.7 5.1 120 14-167 212-335 (337)
265 PTZ00263 protein kinase A cata 99.4 1.5E-13 3.3E-18 134.6 3.8 101 14-155 157-260 (329)
266 cd05582 STKc_RSK_N N-terminal 99.4 1.2E-13 2.7E-18 134.7 3.1 106 14-157 137-245 (318)
267 KOG0986 G protein-coupled rece 99.4 2E-13 4.3E-18 128.6 4.3 104 18-156 332-436 (591)
268 cd05091 PTKc_Ror2 Catalytic do 99.4 2.5E-13 5.4E-18 130.4 5.0 114 14-163 163-281 (283)
269 KOG0690 Serine/threonine prote 99.4 1.8E-13 4E-18 123.4 3.7 98 18-154 313-412 (516)
270 cd05584 STKc_p70S6K Catalytic 99.4 1.7E-13 3.7E-18 134.0 3.9 87 32-154 157-244 (323)
271 PTZ00266 NIMA-related protein 99.4 1.6E-13 3.5E-18 146.4 3.8 113 12-160 179-294 (1021)
272 cd05593 STKc_PKB_gamma Catalyt 99.4 1.8E-13 3.8E-18 134.1 3.8 87 32-154 152-239 (328)
273 cd05594 STKc_PKB_alpha Catalyt 99.4 1.4E-13 3E-18 134.8 3.0 87 32-154 153-240 (325)
274 cd05620 STKc_nPKC_delta Cataly 99.4 2.4E-13 5.1E-18 132.5 4.6 89 32-156 153-242 (316)
275 KOG3881 Uncharacterized conser 99.4 4.9E-11 1.1E-15 109.8 19.2 206 248-455 101-321 (412)
276 cd05591 STKc_nPKC_epsilon Cata 99.4 2.1E-13 4.5E-18 133.3 4.1 89 32-156 153-242 (321)
277 cd05619 STKc_nPKC_theta Cataly 99.4 2.3E-13 5E-18 132.5 4.3 89 32-156 153-242 (316)
278 KOG4717 Serine/threonine prote 99.4 9.8E-14 2.1E-18 132.5 1.5 109 14-160 158-269 (864)
279 PTZ00426 cAMP-dependent protei 99.4 2E-13 4.3E-18 134.1 3.7 100 14-154 170-272 (340)
280 KOG0610 Putative serine/threon 99.4 6.7E-14 1.5E-18 130.5 0.3 92 31-156 291-383 (459)
281 PRK01742 tolB translocation pr 99.4 8.4E-11 1.8E-15 119.1 22.6 210 246-472 197-423 (429)
282 cd05570 STKc_PKC Catalytic dom 99.4 2.3E-13 5E-18 132.7 3.9 88 32-155 153-241 (318)
283 cd05094 PTKc_TrkC Catalytic do 99.4 2.8E-13 6E-18 130.5 4.3 100 32-166 182-283 (291)
284 cd07848 STKc_CDKL5 Catalytic d 99.4 2.5E-13 5.4E-18 130.6 4.0 131 14-160 139-283 (287)
285 cd05604 STKc_SGK3 Catalytic do 99.4 2.5E-13 5.5E-18 132.9 4.0 91 32-158 153-244 (325)
286 KOG1310 WD40 repeat protein [G 99.4 5.9E-12 1.3E-16 120.4 12.9 172 285-461 43-238 (758)
287 PTZ00284 protein kinase; Provi 99.4 1.9E-13 4E-18 140.6 3.1 114 32-160 302-437 (467)
288 cd05036 PTKc_ALK_LTK Catalytic 99.4 3.6E-13 7.9E-18 128.7 4.7 115 13-163 157-276 (277)
289 cd05614 STKc_MSK2_N N-terminal 99.4 3E-13 6.4E-18 132.9 4.2 111 14-156 144-257 (332)
290 cd07867 STKc_CDC2L6 Catalytic 99.4 5E-13 1.1E-17 130.5 5.6 76 2-91 139-218 (317)
291 cd05608 STKc_GRK1 Catalytic do 99.4 2.9E-13 6.4E-18 129.5 3.5 109 14-156 136-247 (280)
292 KOG1187 Serine/threonine prote 99.4 5.1E-13 1.1E-17 130.4 5.0 130 10-165 212-352 (361)
293 KOG2345 Serine/threonine prote 99.4 2.2E-13 4.8E-18 118.5 2.2 96 37-165 200-300 (302)
294 cd05104 PTKc_Kit Catalytic dom 99.4 5.8E-13 1.3E-17 132.8 5.3 118 13-164 252-373 (375)
295 cd05049 PTKc_Trk Catalytic dom 99.4 4.3E-13 9.4E-18 128.4 4.2 96 33-163 182-279 (280)
296 cd05595 STKc_PKB_beta Catalyti 99.4 2.3E-13 5.1E-18 133.0 2.2 87 32-154 152-239 (323)
297 cd05093 PTKc_TrkB Catalytic do 99.4 5E-13 1.1E-17 128.5 4.5 100 32-166 179-280 (288)
298 cd05587 STKc_cPKC Catalytic do 99.3 3.6E-13 7.8E-18 131.8 3.5 89 32-156 158-247 (324)
299 KOG0696 Serine/threonine prote 99.3 3.6E-13 7.7E-18 125.3 3.1 100 18-155 495-595 (683)
300 KOG4721 Serine/threonine prote 99.3 4.4E-13 9.5E-18 129.6 3.7 113 13-162 250-365 (904)
301 PRK11138 outer membrane biogen 99.3 3.9E-09 8.4E-14 106.0 32.2 262 258-536 116-393 (394)
302 PTZ00036 glycogen synthase kin 99.3 6.2E-13 1.4E-17 135.1 4.9 131 13-160 209-350 (440)
303 cd05617 STKc_aPKC_zeta Catalyt 99.3 4.7E-13 1E-17 131.1 3.7 96 32-156 153-249 (327)
304 cd05615 STKc_cPKC_alpha Cataly 99.3 5.7E-13 1.2E-17 130.2 4.3 89 32-156 158-247 (323)
305 cd05610 STKc_MASTL Catalytic d 99.3 2.8E-13 6.1E-18 144.3 1.9 98 31-161 536-634 (669)
306 cd05586 STKc_Sck1_like Catalyt 99.3 5.2E-13 1.1E-17 131.0 3.7 92 32-157 153-245 (330)
307 KOG0193 Serine/threonine prote 99.3 9E-13 2E-17 128.8 4.9 108 32-167 547-655 (678)
308 cd06649 PKc_MEK2 Catalytic dom 99.3 6.5E-13 1.4E-17 130.3 4.0 47 32-93 159-206 (331)
309 cd05605 STKc_GRK4_like Catalyt 99.3 1.2E-12 2.5E-17 125.7 5.6 92 33-156 159-251 (285)
310 cd07863 STKc_CDK4 Catalytic do 99.3 5.5E-13 1.2E-17 128.3 3.3 114 32-160 164-284 (288)
311 KOG0584 Serine/threonine prote 99.3 5.1E-13 1.1E-17 131.2 3.0 106 15-161 186-296 (632)
312 PHA03207 serine/threonine kina 99.3 7.3E-13 1.6E-17 133.0 4.1 132 14-161 224-375 (392)
313 KOG0614 cGMP-dependent protein 99.3 4.1E-13 8.8E-18 128.1 2.0 100 18-154 565-665 (732)
314 KOG1523 Actin-related protein 99.3 6.2E-10 1.3E-14 100.1 21.9 243 287-537 5-278 (361)
315 PLN00034 mitogen-activated pro 99.3 4.9E-13 1.1E-17 132.5 2.6 118 14-161 207-328 (353)
316 cd05052 PTKc_Abl Catalytic dom 99.3 1.1E-12 2.4E-17 124.4 4.9 97 34-165 164-262 (263)
317 cd05111 PTK_HER3 Pseudokinase 99.3 1.4E-12 3E-17 124.9 5.5 119 14-167 148-270 (279)
318 cd05607 STKc_GRK7 Catalytic do 99.3 7.5E-13 1.6E-17 126.5 3.6 96 33-160 152-249 (277)
319 cd05600 STKc_Sid2p_Dbf2p Catal 99.3 7.9E-13 1.7E-17 129.9 3.8 100 32-161 155-257 (333)
320 cd05072 PTKc_Lyn Catalytic dom 99.3 1.1E-12 2.3E-17 124.3 4.4 111 18-164 148-260 (261)
321 KOG4645 MAPKKK (MAP kinase kin 99.3 5.3E-13 1.2E-17 140.9 2.4 117 13-160 1372-1493(1509)
322 cd05044 PTKc_c-ros Catalytic d 99.3 1.4E-12 3.1E-17 124.1 5.1 116 13-163 149-268 (269)
323 cd05055 PTKc_PDGFR Catalytic d 99.3 1.2E-12 2.5E-17 126.8 4.5 118 13-165 179-301 (302)
324 cd08529 STKc_FA2-like Catalyti 99.3 1.2E-12 2.6E-17 123.5 4.5 106 18-160 146-252 (256)
325 cd05618 STKc_aPKC_iota Catalyt 99.3 1E-12 2.3E-17 128.7 4.1 97 32-155 153-250 (329)
326 cd07875 STKc_JNK1 Catalytic do 99.3 1.2E-12 2.7E-17 130.2 4.7 61 14-92 165-228 (364)
327 cd05588 STKc_aPKC Catalytic do 99.3 1.2E-12 2.7E-17 128.2 4.5 97 32-155 153-250 (329)
328 cd05062 PTKc_IGF-1R Catalytic 99.3 9.7E-13 2.1E-17 125.8 3.6 93 35-163 181-276 (277)
329 cd05105 PTKc_PDGFR_alpha Catal 99.3 1.4E-12 3.1E-17 130.4 4.9 119 14-166 276-398 (400)
330 cd05092 PTKc_TrkA Catalytic do 99.3 1.2E-12 2.6E-17 125.3 4.1 96 33-163 182-279 (280)
331 KOG4547 WD40 repeat-containing 99.3 4.2E-10 9E-15 109.3 21.4 203 262-493 5-221 (541)
332 KOG4497 Uncharacterized conser 99.3 1.9E-09 4.2E-14 97.2 24.0 295 225-533 14-428 (447)
333 cd05630 STKc_GRK6 Catalytic do 99.3 1.5E-12 3.2E-17 125.0 4.7 91 33-155 159-250 (285)
334 cd05090 PTKc_Ror1 Catalytic do 99.3 1.8E-12 4E-17 124.3 5.0 116 14-164 163-282 (283)
335 cd06609 STKc_MST3_like Catalyt 99.3 1.6E-12 3.4E-17 124.1 4.5 94 32-160 155-250 (274)
336 PF02239 Cytochrom_D1: Cytochr 99.3 1.1E-08 2.4E-13 100.3 31.6 303 238-547 22-356 (369)
337 cd07859 STKc_TDY_MAPK_plant Ca 99.3 1.3E-12 2.7E-17 128.9 3.9 116 32-160 163-289 (338)
338 KOG1354 Serine/threonine prote 99.3 3.8E-10 8.3E-15 102.3 19.2 239 252-494 25-361 (433)
339 cd08229 STKc_Nek7 Catalytic do 99.3 2.1E-12 4.6E-17 122.7 5.2 100 32-165 163-265 (267)
340 cd07871 STKc_PCTAIRE3 Catalyti 99.3 1.3E-12 2.8E-17 125.6 3.7 115 32-160 160-284 (288)
341 cd05596 STKc_ROCK Catalytic do 99.3 7.1E-13 1.5E-17 131.9 1.9 119 13-160 180-303 (370)
342 cd07876 STKc_JNK2 Catalytic do 99.3 2.1E-12 4.7E-17 128.3 5.3 60 14-91 162-224 (359)
343 cd05096 PTKc_DDR1 Catalytic do 99.3 1.2E-12 2.6E-17 126.9 3.4 122 14-163 177-303 (304)
344 cd05573 STKc_ROCK_NDR_like Cat 99.3 1E-12 2.2E-17 130.3 2.9 94 32-160 187-284 (350)
345 PHA02882 putative serine/threo 99.3 3.2E-12 7E-17 123.2 6.2 100 34-162 192-293 (294)
346 cd05035 PTKc_Axl_like Catalyti 99.3 2.1E-12 4.5E-17 123.2 4.8 117 14-165 152-272 (273)
347 KOG4190 Uncharacterized conser 99.3 2.7E-11 5.8E-16 116.0 11.9 284 242-533 725-1032(1034)
348 cd08228 STKc_Nek6 Catalytic do 99.3 2.5E-12 5.3E-17 122.3 5.0 100 32-165 163-265 (267)
349 cd05051 PTKc_DDR Catalytic dom 99.3 1.8E-12 3.9E-17 125.2 4.1 117 18-163 175-295 (296)
350 PRK11138 outer membrane biogen 99.3 6E-09 1.3E-13 104.7 29.6 273 259-546 66-361 (394)
351 cd08219 STKc_Nek3 Catalytic do 99.3 1.7E-12 3.6E-17 122.5 3.6 94 32-160 157-251 (255)
352 cd06637 STKc_TNIK Catalytic do 99.3 1.7E-12 3.6E-17 123.8 3.6 116 14-160 150-268 (272)
353 cd05070 PTKc_Fyn_Yrk Catalytic 99.3 2.3E-12 4.9E-17 122.0 4.5 95 34-163 162-258 (260)
354 cd05043 PTK_Ryk Pseudokinase d 99.3 2.6E-12 5.7E-17 123.0 4.9 114 18-166 162-277 (280)
355 PHA03212 serine/threonine kina 99.3 4.4E-12 9.5E-17 126.8 6.5 44 32-90 240-284 (391)
356 cd05053 PTKc_FGFR Catalytic do 99.3 3.3E-12 7.1E-17 123.2 5.4 118 14-166 171-292 (293)
357 cd05632 STKc_GRK5 Catalytic do 99.3 2.5E-12 5.4E-17 123.4 4.5 92 33-156 159-251 (285)
358 PRK03629 tolB translocation pr 99.3 3.3E-09 7.1E-14 107.3 27.2 231 272-519 179-427 (429)
359 cd05098 PTKc_FGFR1 Catalytic d 99.3 3.4E-12 7.3E-17 124.0 5.2 97 35-166 202-300 (307)
360 cd08223 STKc_Nek4 Catalytic do 99.3 2.5E-12 5.4E-17 121.5 4.1 94 32-160 159-253 (257)
361 cd05075 PTKc_Axl Catalytic dom 99.3 3.4E-12 7.3E-17 121.7 4.9 113 18-165 157-271 (272)
362 cd05045 PTKc_RET Catalytic dom 99.3 3.3E-12 7.1E-17 123.0 4.9 99 33-166 187-287 (290)
363 cd07874 STKc_JNK3 Catalytic do 99.3 3.7E-12 8.1E-17 126.4 5.4 61 14-92 158-221 (355)
364 KOG2394 WD40 protein DMR-N9 [G 99.3 1.9E-10 4.1E-15 110.1 16.4 159 227-391 181-383 (636)
365 cd05109 PTKc_HER2 Catalytic do 99.3 3E-12 6.6E-17 122.5 4.4 118 14-166 148-269 (279)
366 cd06654 STKc_PAK1 Catalytic do 99.3 1.8E-12 4E-17 125.1 2.9 96 32-160 173-269 (296)
367 cd05032 PTKc_InsR_like Catalyt 99.3 2.9E-12 6.3E-17 122.5 4.2 110 18-162 164-275 (277)
368 cd05108 PTKc_EGFR Catalytic do 99.3 3.8E-12 8.3E-17 124.1 5.1 119 14-167 148-270 (316)
369 cd05071 PTKc_Src Catalytic dom 99.3 3.4E-12 7.3E-17 120.9 4.6 112 18-165 147-260 (262)
370 cd05622 STKc_ROCK1 Catalytic d 99.3 1.6E-12 3.5E-17 129.3 2.5 69 14-94 181-252 (371)
371 cd05101 PTKc_FGFR2 Catalytic d 99.3 4.3E-12 9.2E-17 123.1 5.3 113 18-166 182-297 (304)
372 cd06650 PKc_MEK1 Catalytic dom 99.3 2E-12 4.2E-17 127.0 2.8 47 33-94 160-207 (333)
373 cd06636 STKc_MAP4K4_6 Catalyti 99.3 1.9E-12 4.2E-17 124.1 2.8 99 33-160 179-278 (282)
374 KOG0974 WD-repeat protein WDR6 99.3 5E-10 1.1E-14 115.5 20.2 266 253-539 8-290 (967)
375 cd05099 PTKc_FGFR4 Catalytic d 99.3 4.7E-12 1E-16 123.4 5.5 113 18-166 179-294 (314)
376 cd05116 PTKc_Syk Catalytic dom 99.3 2.9E-12 6.3E-17 121.0 3.9 95 35-164 158-254 (257)
377 cd05598 STKc_LATS Catalytic do 99.3 1.5E-12 3.1E-17 130.4 1.8 46 33-93 202-248 (376)
378 KOG0604 MAP kinase-activated p 99.3 1.8E-12 3.8E-17 116.0 2.0 115 15-160 204-321 (400)
379 cd05082 PTKc_Csk Catalytic dom 99.3 4E-12 8.7E-17 120.0 4.5 96 34-164 158-255 (256)
380 cd05601 STKc_CRIK Catalytic do 99.3 1.5E-12 3.3E-17 127.8 1.6 119 14-160 141-262 (330)
381 cd07869 STKc_PFTAIRE1 Catalyti 99.2 4.1E-12 8.8E-17 123.2 4.5 115 32-160 160-287 (303)
382 cd05069 PTKc_Yes Catalytic dom 99.2 3.8E-12 8.2E-17 120.5 4.2 96 34-164 162-259 (260)
383 cd05599 STKc_NDR_like Catalyti 99.2 1.8E-12 3.9E-17 129.1 2.0 89 34-155 198-287 (364)
384 cd05078 PTK_Jak2_Jak3_rpt1 Pse 99.2 4.5E-12 9.8E-17 119.8 4.6 94 33-162 162-257 (258)
385 KOG2139 WD40 repeat protein [G 99.2 1.1E-08 2.5E-13 93.5 26.0 276 254-537 100-431 (445)
386 cd07831 STKc_MOK Catalytic dom 99.2 5.4E-12 1.2E-16 121.0 5.0 130 13-160 137-278 (282)
387 cd06619 PKc_MKK5 Catalytic dom 99.2 3.9E-12 8.4E-17 121.8 3.8 114 14-160 134-252 (279)
388 cd06616 PKc_MKK4 Catalytic dom 99.2 1.8E-12 3.8E-17 124.8 1.5 99 33-160 165-266 (288)
389 cd07878 STKc_p38beta_MAPK11 Ca 99.2 4E-12 8.7E-17 125.5 4.0 128 14-160 157-297 (343)
390 cd05625 STKc_LATS1 Catalytic d 99.2 2.1E-12 4.6E-17 129.4 2.0 46 33-93 206-252 (382)
391 cd05148 PTKc_Srm_Brk Catalytic 99.2 6E-12 1.3E-16 119.2 5.0 110 18-164 149-260 (261)
392 cd05033 PTKc_EphR Catalytic do 99.2 5.5E-12 1.2E-16 119.8 4.6 95 35-165 168-265 (266)
393 KOG0574 STE20-like serine/thre 99.2 2.8E-12 6.1E-17 114.6 2.3 117 10-161 164-283 (502)
394 PRK04922 tolB translocation pr 99.2 2.2E-09 4.8E-14 109.0 23.8 212 272-494 184-413 (433)
395 cd06625 STKc_MEKK3_like Cataly 99.2 3.2E-12 7E-17 121.1 2.9 94 33-160 165-259 (263)
396 cd00192 PTKc Catalytic domain 99.2 6.8E-12 1.5E-16 118.8 5.0 109 18-162 150-261 (262)
397 cd05626 STKc_LATS2 Catalytic d 99.2 3.5E-12 7.6E-17 127.7 3.2 96 33-160 206-304 (381)
398 cd05064 PTKc_EphR_A10 Catalyti 99.2 5.6E-12 1.2E-16 119.7 4.4 96 35-165 168-265 (266)
399 PRK13184 pknD serine/threonine 99.2 4.6E-12 1E-16 134.8 4.1 100 33-166 189-291 (932)
400 PHA03211 serine/threonine kina 99.2 6.6E-12 1.4E-16 127.3 5.0 61 14-89 299-362 (461)
401 cd05067 PTKc_Lck_Blk Catalytic 99.2 6.9E-12 1.5E-16 118.7 4.9 96 33-163 161-258 (260)
402 cd05621 STKc_ROCK2 Catalytic d 99.2 3.4E-12 7.4E-17 126.9 2.9 69 14-94 181-252 (370)
403 cd05627 STKc_NDR2 Catalytic do 99.2 2.7E-12 5.8E-17 127.6 2.1 92 34-160 195-289 (360)
404 cd08528 STKc_Nek10 Catalytic d 99.2 6.2E-12 1.3E-16 119.7 4.5 112 14-162 153-267 (269)
405 cd06608 STKc_myosinIII_like Ca 99.2 4.8E-12 1E-16 120.8 3.8 101 32-160 170-271 (275)
406 cd05097 PTKc_DDR_like Catalyti 99.2 1E-11 2.2E-16 119.9 5.9 103 33-163 189-294 (295)
407 cd06642 STKc_STK25-YSK1 Cataly 99.2 5.7E-12 1.2E-16 120.5 4.0 111 14-161 140-253 (277)
408 cd08224 STKc_Nek6_Nek7 Catalyt 99.2 9.3E-12 2E-16 118.3 5.4 99 33-165 164-265 (267)
409 KOG1409 Uncharacterized conser 99.2 2.4E-09 5.3E-14 97.2 20.4 224 220-454 25-270 (404)
410 cd05060 PTKc_Syk_like Catalyti 99.2 7.1E-12 1.5E-16 118.4 4.5 94 37-165 160-255 (257)
411 cd06645 STKc_MAP4K3 Catalytic 99.2 3.2E-12 6.9E-17 121.5 2.1 100 32-160 163-264 (267)
412 KOG0586 Serine/threonine prote 99.2 2.5E-12 5.3E-17 126.3 1.3 117 6-160 185-305 (596)
413 cd07853 STKc_NLK Catalytic dom 99.2 7.4E-12 1.6E-16 125.0 4.8 113 32-160 161-287 (372)
414 cd06655 STKc_PAK2 Catalytic do 99.2 3.9E-12 8.5E-17 122.7 2.7 95 32-160 172-268 (296)
415 cd05040 PTKc_Ack_like Catalyti 99.2 7.9E-12 1.7E-16 118.1 4.7 95 34-162 159-255 (257)
416 cd05073 PTKc_Hck Catalytic dom 99.2 9E-12 2E-16 117.9 4.9 116 13-164 140-259 (260)
417 cd08220 STKc_Nek8 Catalytic do 99.2 7.6E-12 1.6E-16 118.1 4.3 93 33-160 159-252 (256)
418 cd08225 STKc_Nek5 Catalytic do 99.2 7.6E-12 1.6E-16 118.1 4.2 93 33-160 160-253 (257)
419 cd05088 PTKc_Tie2 Catalytic do 99.2 9.3E-12 2E-16 120.6 4.9 94 37-166 185-281 (303)
420 cd05629 STKc_NDR_like_fungal C 99.2 4E-12 8.7E-17 127.2 2.5 45 34-93 207-252 (377)
421 cd05089 PTKc_Tie1 Catalytic do 99.2 6.6E-12 1.4E-16 121.3 3.8 94 38-167 181-277 (297)
422 cd07861 STKc_CDK1_euk Catalyti 99.2 1E-11 2.2E-16 119.3 5.1 114 33-160 159-281 (285)
423 cd05095 PTKc_DDR2 Catalytic do 99.2 9.6E-12 2.1E-16 120.1 4.8 103 33-163 190-295 (296)
424 KOG0603 Ribosomal protein S6 k 99.2 4.7E-12 1E-16 125.0 2.6 86 38-160 476-562 (612)
425 cd06610 STKc_OSR1_SPAK Catalyt 99.2 7.2E-12 1.6E-16 119.0 3.8 98 32-160 163-263 (267)
426 KOG1989 ARK protein kinase fam 99.2 4.6E-12 9.9E-17 129.7 2.5 95 38-167 218-313 (738)
427 cd07872 STKc_PCTAIRE2 Catalyti 99.2 9.7E-12 2.1E-16 120.9 4.7 113 32-160 161-285 (309)
428 cd05084 PTKc_Fes Catalytic dom 99.2 7.2E-12 1.6E-16 118.0 3.7 91 37-163 158-251 (252)
429 cd05107 PTKc_PDGFR_beta Cataly 99.2 9E-12 1.9E-16 124.7 4.5 100 33-166 299-400 (401)
430 cd06620 PKc_MAPKK_Byr1_like Ca 99.2 9.9E-12 2.2E-16 119.3 4.7 104 33-161 160-266 (284)
431 cd06643 STKc_SLK Catalytic dom 99.2 4.5E-12 9.8E-17 121.5 2.1 101 32-160 160-261 (282)
432 cd05068 PTKc_Frk_like Catalyti 99.2 7.6E-12 1.6E-16 118.5 3.6 93 37-164 166-260 (261)
433 PRK05137 tolB translocation pr 99.2 1.2E-08 2.7E-13 103.7 27.2 214 272-496 182-416 (435)
434 cd05057 PTKc_EGFR_like Catalyt 99.2 1.4E-11 3.1E-16 117.9 5.3 117 14-166 148-269 (279)
435 KOG0580 Serine/threonine prote 99.2 1.1E-11 2.5E-16 107.5 4.1 94 32-161 179-273 (281)
436 cd05628 STKc_NDR1 Catalytic do 99.2 6.3E-12 1.4E-16 125.0 2.9 46 33-93 194-240 (363)
437 cd05050 PTKc_Musk Catalytic do 99.2 1.1E-11 2.4E-16 119.2 4.5 94 35-163 192-287 (288)
438 cd06648 STKc_PAK_II Catalytic 99.2 1.1E-11 2.4E-16 119.0 4.5 95 33-160 173-268 (285)
439 cd06640 STKc_MST4 Catalytic do 99.2 5.8E-12 1.3E-16 120.4 2.5 95 32-161 158-253 (277)
440 cd06659 STKc_PAK6 Catalytic do 99.2 6.9E-12 1.5E-16 121.1 3.1 95 33-161 175-271 (297)
441 KOG0579 Ste20-like serine/thre 99.2 4.2E-12 9.2E-17 124.3 1.5 115 13-160 171-288 (1187)
442 PRK03629 tolB translocation pr 99.2 8.3E-09 1.8E-13 104.4 25.4 213 248-472 194-425 (429)
443 cd05100 PTKc_FGFR3 Catalytic d 99.2 1.4E-11 3.1E-16 121.0 5.3 118 14-166 173-294 (334)
444 cd05047 PTKc_Tie Catalytic dom 99.2 1.1E-11 2.3E-16 118.1 4.3 94 37-166 173-269 (270)
445 cd05077 PTK_Jak1_rpt1 Pseudoki 99.2 9.1E-12 2E-16 117.9 3.7 93 34-162 167-261 (262)
446 KOG0661 MAPK related serine/th 99.2 1.2E-11 2.6E-16 117.6 4.4 137 2-161 141-291 (538)
447 PF00069 Pkinase: Protein kina 99.2 1.3E-11 2.7E-16 116.9 4.5 102 31-160 154-256 (260)
448 cd07873 STKc_PCTAIRE1 Catalyti 99.2 7.9E-12 1.7E-16 121.1 3.2 115 32-160 161-285 (301)
449 cd05074 PTKc_Tyro3 Catalytic d 99.2 1.4E-11 3E-16 117.5 4.8 98 33-165 173-272 (273)
450 cd08218 STKc_Nek1 Catalytic do 99.2 1.2E-11 2.6E-16 116.7 4.4 93 33-160 159-252 (256)
451 cd06612 STKc_MST1_2 Catalytic 99.2 5.1E-12 1.1E-16 119.3 1.8 96 32-160 156-252 (256)
452 cd05085 PTKc_Fer Catalytic dom 99.2 1.3E-11 2.7E-16 116.1 4.4 91 36-162 155-248 (250)
453 PF07714 Pkinase_Tyr: Protein 99.2 5.8E-12 1.3E-16 119.0 2.1 115 12-162 140-259 (259)
454 cd05061 PTKc_InsR Catalytic do 99.2 1.4E-11 3E-16 118.5 4.8 97 34-166 180-279 (288)
455 KOG2139 WD40 repeat protein [G 99.2 1.6E-08 3.5E-13 92.5 24.0 235 251-492 139-431 (445)
456 PRK02889 tolB translocation pr 99.2 5.2E-09 1.1E-13 105.9 23.5 211 272-493 176-404 (427)
457 cd07839 STKc_CDK5 Catalytic do 99.2 1.6E-11 3.6E-16 117.8 5.2 113 33-160 157-280 (284)
458 cd06658 STKc_PAK5 Catalytic do 99.2 8.3E-12 1.8E-16 120.2 3.1 96 33-161 176-272 (292)
459 cd06638 STKc_myosinIIIA Cataly 99.2 8E-12 1.7E-16 120.1 2.9 101 33-161 182-283 (286)
460 cd05058 PTKc_Met_Ron Catalytic 99.2 1.4E-11 3.1E-16 116.7 4.6 97 34-166 161-260 (262)
461 cd05114 PTKc_Tec_Rlk Catalytic 99.2 9.8E-12 2.1E-16 117.3 3.4 93 34-162 160-255 (256)
462 cd05115 PTKc_Zap-70 Catalytic 99.2 1.4E-11 3.1E-16 116.2 4.5 95 36-165 159-255 (257)
463 KOG0607 MAP kinase-interacting 99.2 5.8E-12 1.3E-16 113.6 1.7 111 29-159 240-359 (463)
464 cd06628 STKc_MAPKKK_Byr2_like 99.2 1.2E-11 2.7E-16 117.4 4.0 93 33-160 170-263 (267)
465 cd08217 STKc_Nek2 Catalytic do 99.2 1.5E-11 3.2E-16 116.7 4.5 94 32-160 167-261 (265)
466 cd06624 STKc_ASK Catalytic dom 99.2 1.4E-11 3.1E-16 117.1 4.3 98 32-160 166-264 (268)
467 cd05609 STKc_MAST Catalytic do 99.2 7.9E-12 1.7E-16 121.3 2.5 98 34-164 175-273 (305)
468 cd07866 STKc_BUR1 Catalytic do 99.2 1E-11 2.3E-16 120.8 3.3 114 33-160 184-307 (311)
469 PHA03390 pk1 serine/threonine- 99.2 8.6E-12 1.9E-16 118.4 2.6 94 34-159 165-260 (267)
470 cd05063 PTKc_EphR_A2 Catalytic 99.2 1.5E-11 3.3E-16 116.9 4.3 94 37-165 172-267 (268)
471 KOG0695 Serine/threonine prote 99.2 1.2E-11 2.5E-16 112.3 3.2 95 32-154 408-503 (593)
472 cd06613 STKc_MAP4K3_like Catal 99.2 5.3E-12 1.1E-16 119.6 1.0 100 32-160 158-259 (262)
473 KOG0612 Rho-associated, coiled 99.2 1.5E-11 3.2E-16 128.5 4.3 100 31-160 232-337 (1317)
474 cd05574 STKc_phototropin_like 99.2 1.2E-11 2.6E-16 120.7 3.5 92 33-158 190-282 (316)
475 cd05041 PTKc_Fes_like Catalyti 99.2 1.5E-11 3.3E-16 115.6 4.1 91 37-163 157-250 (251)
476 cd06622 PKc_MAPKK_PBS2_like Ca 99.2 1.3E-11 2.8E-16 118.6 3.6 102 33-160 159-261 (286)
477 cd05611 STKc_Rim15_like Cataly 99.2 1E-11 2.2E-16 117.6 2.7 98 33-162 151-249 (260)
478 KOG2321 WD40 repeat protein [G 99.2 5.8E-09 1.3E-13 100.9 21.3 187 297-492 138-343 (703)
479 cd05103 PTKc_VEGFR2 Catalytic 99.2 2.1E-11 4.5E-16 120.3 5.0 100 34-167 240-341 (343)
480 cd05080 PTKc_Tyk2_rpt2 Catalyt 99.2 1.7E-11 3.7E-16 117.6 4.3 110 35-165 170-281 (283)
481 cd05110 PTKc_HER4 Catalytic do 99.2 1.9E-11 4.1E-16 118.5 4.4 118 14-166 148-269 (303)
482 KOG0974 WD-repeat protein WDR6 99.2 9.1E-10 2E-14 113.6 16.6 187 304-494 98-290 (967)
483 cd06646 STKc_MAP4K5 Catalytic 99.2 4.6E-12 1E-16 120.4 0.1 99 33-160 164-264 (267)
484 cd07842 STKc_CDK8_like Catalyt 99.2 2.7E-11 5.9E-16 118.2 5.5 45 33-91 173-218 (316)
485 PF02239 Cytochrom_D1: Cytochr 99.2 1.8E-08 3.8E-13 99.0 25.0 268 263-545 6-309 (369)
486 PF13360 PQQ_2: PQQ-like domai 99.2 4.9E-08 1.1E-12 90.9 27.2 219 270-499 1-237 (238)
487 cd08221 STKc_Nek9 Catalytic do 99.2 1.9E-11 4.2E-16 115.3 4.2 94 32-160 158-252 (256)
488 cd05580 STKc_PKA Catalytic dom 99.2 1.6E-11 3.4E-16 118.2 3.6 97 18-155 146-243 (290)
489 cd05059 PTKc_Tec_like Catalyti 99.2 2.1E-11 4.6E-16 115.0 4.3 90 37-162 163-255 (256)
490 PLN00113 leucine-rich repeat r 99.2 8.7E-12 1.9E-16 140.3 1.8 111 34-166 837-952 (968)
491 cd05056 PTKc_FAK Catalytic dom 99.2 2.6E-11 5.7E-16 115.4 4.9 98 34-166 167-266 (270)
492 KOG1064 RAVE (regulator of V-A 99.2 2.7E-10 5.9E-15 122.9 12.8 250 262-530 2180-2439(2439)
493 cd06917 STKc_NAK1_like Catalyt 99.2 1.4E-11 3E-16 117.8 2.8 96 32-160 158-254 (277)
494 cd05087 PTKc_Aatyk1_Aatyk3 Cat 99.2 2E-11 4.2E-16 116.2 3.8 105 33-162 160-267 (269)
495 KOG0197 Tyrosine kinases [Sign 99.1 1.6E-11 3.4E-16 119.1 3.0 119 10-166 338-462 (468)
496 cd06644 STKc_STK10_LOK Catalyt 99.1 8.3E-12 1.8E-16 120.3 1.1 100 33-160 168-268 (292)
497 cd05113 PTKc_Btk_Bmx Catalytic 99.1 1.9E-11 4.1E-16 115.3 3.4 92 35-162 161-255 (256)
498 cd07837 STKc_CdkB_plant Cataly 99.1 2.8E-11 6.2E-16 116.8 4.6 112 35-160 171-290 (295)
499 cd06639 STKc_myosinIIIB Cataly 99.1 1.3E-11 2.9E-16 118.9 2.2 99 33-160 186-286 (291)
500 cd06605 PKc_MAPKK Catalytic do 99.1 2.8E-11 6E-16 114.9 4.3 95 35-160 159-256 (265)
No 1
>KOG0271 consensus Notchless-like WD40 repeat-containing protein [Function unknown]
Probab=100.00 E-value=3.9e-44 Score=322.33 Aligned_cols=312 Identities=23% Similarity=0.369 Sum_probs=268.8
Q ss_pred hhcCCCCCCCccccceeeecCcceEEEeeCCCeEEEEE---------eecCccceEEEEEc--CCEEEEEeCCCcEEEEe
Q 008820 210 ELLGAENSDGADIDQARAAGGVKDLVNGLSKGNVKFKD---------LQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWS 278 (552)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------l~~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd 278 (552)
+..++...++..+.++.|++.+..++++..|.++++|+ .+||..+|.|++|+ |+.||+|+.||+|++||
T Consensus 106 rCssS~~GH~e~Vl~~~fsp~g~~l~tGsGD~TvR~WD~~TeTp~~t~KgH~~WVlcvawsPDgk~iASG~~dg~I~lwd 185 (480)
T KOG0271|consen 106 RCSSSIAGHGEAVLSVQFSPTGSRLVTGSGDTTVRLWDLDTETPLFTCKGHKNWVLCVAWSPDGKKIASGSKDGSIRLWD 185 (480)
T ss_pred eeccccCCCCCcEEEEEecCCCceEEecCCCceEEeeccCCCCcceeecCCccEEEEEEECCCcchhhccccCCeEEEec
Confidence 34455667788899999999999999999999999998 47999999999999 99999999999999999
Q ss_pred CCCCeEE-EEEeCCCCCeEEEEEecC----CCCEEEEEcCCCcEEEEeCCCCCCCccccccccCCCceeeeEEEEeeCCC
Q 008820 279 LKDFSHV-HTFKGHDHKVMAVVYVDE----DQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGR 353 (552)
Q Consensus 279 ~~~~~~~-~~~~~h~~~v~~v~~~~~----~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (552)
.++|+++ ..+.+|...|++++|.|- ...+|++++.||+++|||+..+..... ..+ +..++.|+.+.|.
T Consensus 186 pktg~~~g~~l~gH~K~It~Lawep~hl~p~~r~las~skDg~vrIWd~~~~~~~~~---lsg----HT~~VTCvrwGG~ 258 (480)
T KOG0271|consen 186 PKTGQQIGRALRGHKKWITALAWEPLHLVPPCRRLASSSKDGSVRIWDTKLGTCVRT---LSG----HTASVTCVRWGGE 258 (480)
T ss_pred CCCCCcccccccCcccceeEEeecccccCCCccceecccCCCCEEEEEccCceEEEE---ecc----CccceEEEEEcCC
Confidence 9998765 678999999999999862 345889999999999999986543333 333 3446788899866
Q ss_pred -EEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe-------------CC-------------------------E
Q 008820 354 -YLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC-------------NG-------------------------V 394 (552)
Q Consensus 354 -~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~-------------~~-------------------------~ 394 (552)
++++|+.|++|++|+...|.+...+++|...|+.++.+ +. .
T Consensus 259 gliySgS~DrtIkvw~a~dG~~~r~lkGHahwvN~lalsTdy~LRtgaf~~t~~~~~~~se~~~~Al~rY~~~~~~~~er 338 (480)
T KOG0271|consen 259 GLIYSGSQDRTIKVWRALDGKLCRELKGHAHWVNHLALSTDYVLRTGAFDHTGRKPKSFSEEQKKALERYEAVLKDSGER 338 (480)
T ss_pred ceEEecCCCceEEEEEccchhHHHhhcccchheeeeeccchhhhhccccccccccCCChHHHHHHHHHHHHHhhccCcce
Confidence 99999999999999999999999999999999999876 22 3
Q ss_pred EEEEeCCCcEEEEECCCCc-eeEEEecCCCCceEEEEEEcCCCCEEEEEECCCcEEEEe--CCcceeeeecccceEEEEE
Q 008820 395 LYSGSRDGTIRLWSLSDHS-LLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWR--NDKFMKSMQTHKGSVFAVF 471 (552)
Q Consensus 395 l~s~~~dg~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd--~~~~~~~~~~h~~~v~~v~ 471 (552)
+++|+.|.++.+|+....+ ++....+| ...+.. +.|+||++++++++.|..|++|| .++.+.++.+|-+.|+.++
T Consensus 339 lVSgsDd~tlflW~p~~~kkpi~rmtgH-q~lVn~-V~fSPd~r~IASaSFDkSVkLW~g~tGk~lasfRGHv~~VYqva 416 (480)
T KOG0271|consen 339 LVSGSDDFTLFLWNPFKSKKPITRMTGH-QALVNH-VSFSPDGRYIASASFDKSVKLWDGRTGKFLASFRGHVAAVYQVA 416 (480)
T ss_pred eEEecCCceEEEecccccccchhhhhch-hhheee-EEECCCccEEEEeecccceeeeeCCCcchhhhhhhccceeEEEE
Confidence 9999999999999986544 66666665 345555 69999999999999999999998 5678899999999999999
Q ss_pred e--cCCEEEEEeCCCeEEEEecCCCeeeeeeccCCCcccCcceEEEEEeC--CeEEEEeCCCeEEEEE
Q 008820 472 L--EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQ--GKLFVGCADRTVKIAL 535 (552)
Q Consensus 472 ~--~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~~--~~l~s~s~Dg~v~iw~ 535 (552)
| |.++|++||.|.++++||+++.++...+..+ ...|.++.|+| .++++|+.|..+++|.
T Consensus 417 wsaDsRLlVS~SkDsTLKvw~V~tkKl~~DLpGh-----~DEVf~vDwspDG~rV~sggkdkv~~lw~ 479 (480)
T KOG0271|consen 417 WSADSRLLVSGSKDSTLKVWDVRTKKLKQDLPGH-----ADEVFAVDWSPDGQRVASGGKDKVLRLWR 479 (480)
T ss_pred eccCccEEEEcCCCceEEEEEeeeeeecccCCCC-----CceEEEEEecCCCceeecCCCceEEEeec
Confidence 9 8889999999999999999998887765543 77899999995 3589999999999995
No 2
>KOG0271 consensus Notchless-like WD40 repeat-containing protein [Function unknown]
Probab=100.00 E-value=6.4e-44 Score=320.91 Aligned_cols=290 Identities=24% Similarity=0.365 Sum_probs=246.7
Q ss_pred EEeecCccceEEEEEc--CCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCC
Q 008820 246 KDLQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFS 323 (552)
Q Consensus 246 ~~l~~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~ 323 (552)
..+.||.++|.|++|+ +..|+||+.|.++|+||+.+..+..+.++|...|.|++|+|++. .+++|+.||+|++||..
T Consensus 109 sS~~GH~e~Vl~~~fsp~g~~l~tGsGD~TvR~WD~~TeTp~~t~KgH~~WVlcvawsPDgk-~iASG~~dg~I~lwdpk 187 (480)
T KOG0271|consen 109 SSIAGHGEAVLSVQFSPTGSRLVTGSGDTTVRLWDLDTETPLFTCKGHKNWVLCVAWSPDGK-KIASGSKDGSIRLWDPK 187 (480)
T ss_pred cccCCCCCcEEEEEecCCCceEEecCCCceEEeeccCCCCcceeecCCccEEEEEEECCCcc-hhhccccCCeEEEecCC
Confidence 4588999999999999 99999999999999999999999999999999999999999876 67999999999999988
Q ss_pred CCCCCccccccccCCCceeeeEEEEe-------eCCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe-CCEE
Q 008820 324 FPLGHEPLKKWNEEKDWRYSGIHALT-------TSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC-NGVL 395 (552)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~-~~~l 395 (552)
+++.. ...+.+|.. .|.+++ |..++|++++.||.|+|||+..+.++..+.+|+.+|+|+.|- ++++
T Consensus 188 tg~~~--g~~l~gH~K----~It~Lawep~hl~p~~r~las~skDg~vrIWd~~~~~~~~~lsgHT~~VTCvrwGG~gli 261 (480)
T KOG0271|consen 188 TGQQI--GRALRGHKK----WITALAWEPLHLVPPCRRLASSSKDGSVRIWDTKLGTCVRTLSGHTASVTCVRWGGEGLI 261 (480)
T ss_pred CCCcc--cccccCccc----ceeEEeecccccCCCccceecccCCCCEEEEEccCceEEEEeccCccceEEEEEcCCceE
Confidence 76533 233334333 233333 345689999999999999999999999999999999999999 7799
Q ss_pred EEEeCCCcEEEEECCCCceeEEEecCCCCceEEEEE-----------EcCCCC-------------------------EE
Q 008820 396 YSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLS-----------LTAVQH-------------------------TL 439 (552)
Q Consensus 396 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~-----------~s~~~~-------------------------~l 439 (552)
++|+.|++|++|+...|.+...+++|.. .+.. ++ |.|.++ .+
T Consensus 262 ySgS~DrtIkvw~a~dG~~~r~lkGHah-wvN~-lalsTdy~LRtgaf~~t~~~~~~~se~~~~Al~rY~~~~~~~~erl 339 (480)
T KOG0271|consen 262 YSGSQDRTIKVWRALDGKLCRELKGHAH-WVNH-LALSTDYVLRTGAFDHTGRKPKSFSEEQKKALERYEAVLKDSGERL 339 (480)
T ss_pred EecCCCceEEEEEccchhHHHhhcccch-heee-eeccchhhhhccccccccccCCChHHHHHHHHHHHHHhhccCccee
Confidence 9999999999999999999988887742 2222 23 334343 49
Q ss_pred EEEECCCcEEEEeC---CcceeeeecccceEEEEEe--cCCEEEEEeCCCeEEEEecCCCeeeeeeccCCCcccCcceEE
Q 008820 440 VVSHESGSIKVWRN---DKFMKSMQTHKGSVFAVFL--EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITA 514 (552)
Q Consensus 440 ~~g~~dg~i~iwd~---~~~~~~~~~h~~~v~~v~~--~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~ 514 (552)
++|+.|.++.+|+. .+++....+|..-|+.+.| |+++++++|.|..|++||.++++....+..+ ...|..
T Consensus 340 VSgsDd~tlflW~p~~~kkpi~rmtgHq~lVn~V~fSPd~r~IASaSFDkSVkLW~g~tGk~lasfRGH-----v~~VYq 414 (480)
T KOG0271|consen 340 VSGSDDFTLFLWNPFKSKKPITRMTGHQALVNHVSFSPDGRYIASASFDKSVKLWDGRTGKFLASFRGH-----VAAVYQ 414 (480)
T ss_pred EEecCCceEEEecccccccchhhhhchhhheeeEEECCCccEEEEeecccceeeeeCCCcchhhhhhhc-----cceeEE
Confidence 99999999999984 4578888999999998876 9999999999999999999999988877653 678999
Q ss_pred EEEeCC--eEEEEeCCCeEEEEEecCCcceeEEEeccc
Q 008820 515 LLYWQG--KLFVGCADRTVKIALCNRQIPEIFSLLLHI 550 (552)
Q Consensus 515 l~~~~~--~l~s~s~Dg~v~iw~~~~~~~~~~~~~gh~ 550 (552)
++|+.+ .|++||.|.++++|++. +.+..+.+.||.
T Consensus 415 vawsaDsRLlVS~SkDsTLKvw~V~-tkKl~~DLpGh~ 451 (480)
T KOG0271|consen 415 VAWSADSRLLVSGSKDSTLKVWDVR-TKKLKQDLPGHA 451 (480)
T ss_pred EEeccCccEEEEcCCCceEEEEEee-eeeecccCCCCC
Confidence 999954 48899999999999998 566677888885
No 3
>PLN00181 protein SPA1-RELATED; Provisional
Probab=100.00 E-value=4.7e-41 Score=364.87 Aligned_cols=279 Identities=18% Similarity=0.215 Sum_probs=213.9
Q ss_pred eecCccceEEEEEc--CCEEEEEeCCCcEEEEeCCCC----e----EEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcE
Q 008820 248 LQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDF----S----HVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGI 317 (552)
Q Consensus 248 l~~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~----~----~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i 317 (552)
+.+|.+.|.+++|+ ++++++|+.|++|+|||..+. . +...+. +...+.+++|++....++++++.||+|
T Consensus 479 ~~~~~~~V~~i~fs~dg~~latgg~D~~I~iwd~~~~~~~~~~~~~~~~~~~-~~~~v~~l~~~~~~~~~las~~~Dg~v 557 (793)
T PLN00181 479 LLNSSNLVCAIGFDRDGEFFATAGVNKKIKIFECESIIKDGRDIHYPVVELA-SRSKLSGICWNSYIKSQVASSNFEGVV 557 (793)
T ss_pred ccCCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCcccccccccccceEEec-ccCceeeEEeccCCCCEEEEEeCCCeE
Confidence 45699999999999 899999999999999997532 1 223333 356899999998777889999999999
Q ss_pred EEEeCCCCCCCccccccccCCCceeeeEEEEee-CCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe---CC
Q 008820 318 FVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTT-SGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC---NG 393 (552)
Q Consensus 318 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~---~~ 393 (552)
++||+.++... ..+..+.. .. ...++++ ++++|++|+.||.|++||++++..+..+..+ ..|.++.|. +.
T Consensus 558 ~lWd~~~~~~~---~~~~~H~~-~V-~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~~~~~~~~~-~~v~~v~~~~~~g~ 631 (793)
T PLN00181 558 QVWDVARSQLV---TEMKEHEK-RV-WSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTK-ANICCVQFPSESGR 631 (793)
T ss_pred EEEECCCCeEE---EEecCCCC-CE-EEEEEcCCCCCEEEEEcCCCEEEEEECCCCcEEEEEecC-CCeEEEEEeCCCCC
Confidence 99999865432 33333332 11 2234554 6789999999999999999999998888754 679999996 34
Q ss_pred EEEEEeCCCcEEEEECCCCc-eeEEEecCCCCceEEEEEEcCCCCEEEEEECCCcEEEEeCC--------cceeeeeccc
Q 008820 394 VLYSGSRDGTIRLWSLSDHS-LLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRND--------KFMKSMQTHK 464 (552)
Q Consensus 394 ~l~s~~~dg~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~--------~~~~~~~~h~ 464 (552)
.+++|+.||.|++||+++.+ .+..+..| ...+.. +.|. ++.++++++.|++|++||+. +++..+.+|.
T Consensus 632 ~latgs~dg~I~iwD~~~~~~~~~~~~~h-~~~V~~-v~f~-~~~~lvs~s~D~~ikiWd~~~~~~~~~~~~l~~~~gh~ 708 (793)
T PLN00181 632 SLAFGSADHKVYYYDLRNPKLPLCTMIGH-SKTVSY-VRFV-DSSTLVSSSTDNTLKLWDLSMSISGINETPLHSFMGHT 708 (793)
T ss_pred EEEEEeCCCeEEEEECCCCCccceEecCC-CCCEEE-EEEe-CCCEEEEEECCCEEEEEeCCCCccccCCcceEEEcCCC
Confidence 99999999999999998876 45555554 445555 5675 67899999999999999975 3567888999
Q ss_pred ceEEEEEe--cCCEEEEEeCCCeEEEEecCCCeeeeee--ccC------CCcccCcceEEEEEeCC--eEEEEeCCCeEE
Q 008820 465 GSVFAVFL--EGKWLFTGGWDKTVSVQELAGDEFEEDV--IPT------GAIPCGSVITALLYWQG--KLFVGCADRTVK 532 (552)
Q Consensus 465 ~~v~~v~~--~~~~l~sgs~dg~i~iwd~~~~~~~~~~--~~~------~~~~~~~~v~~l~~~~~--~l~s~s~Dg~v~ 532 (552)
..+.++.+ ++.+|++|+.|+.|++|+.......... ... ....+...|.+++|+++ .|++|+.||.|+
T Consensus 709 ~~i~~v~~s~~~~~lasgs~D~~v~iw~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~V~~v~ws~~~~~lva~~~dG~I~ 788 (793)
T PLN00181 709 NVKNFVGLSVSDGYIATGSETNEVFVYHKAFPMPVLSYKFKTIDPVSGLEVDDASQFISSVCWRGQSSTLVAANSTGNIK 788 (793)
T ss_pred CCeeEEEEcCCCCEEEEEeCCCEEEEEECCCCCceEEEecccCCcccccccCCCCcEEEEEEEcCCCCeEEEecCCCcEE
Confidence 98877765 7899999999999999998654322111 100 01122456999999953 599999999999
Q ss_pred EEEe
Q 008820 533 IALC 536 (552)
Q Consensus 533 iw~~ 536 (552)
||++
T Consensus 789 i~~~ 792 (793)
T PLN00181 789 ILEM 792 (793)
T ss_pred EEec
Confidence 9986
No 4
>KOG0272 consensus U4/U6 small nuclear ribonucleoprotein Prp4 (contains WD40 repeats) [RNA processing and modification]
Probab=100.00 E-value=1.3e-40 Score=303.57 Aligned_cols=274 Identities=22% Similarity=0.313 Sum_probs=242.9
Q ss_pred cCccceEEEEEc--CCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecC-CCCEEEEEcCCCcEEEEeCCCCC
Q 008820 250 GHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDE-DQPLCISGDSGGGIFVWSFSFPL 326 (552)
Q Consensus 250 ~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~~~~~~~~~h~~~v~~v~~~~~-~~~~l~s~~~dg~i~vwd~~~~~ 326 (552)
|-+.+|..+.|+ ++.|+|||.+|.++||+..+...+.+|.+|.+.|.++.|+|. +..-+++|+.||++++|++++..
T Consensus 173 gd~rPis~~~fS~ds~~laT~swsG~~kvW~~~~~~~~~~l~gH~~~v~~~~fhP~~~~~~lat~s~Dgtvklw~~~~e~ 252 (459)
T KOG0272|consen 173 GDTRPISGCSFSRDSKHLATGSWSGLVKVWSVPQCNLLQTLRGHTSRVGAAVFHPVDSDLNLATASADGTVKLWKLSQET 252 (459)
T ss_pred cCCCcceeeEeecCCCeEEEeecCCceeEeecCCcceeEEEeccccceeeEEEccCCCccceeeeccCCceeeeccCCCc
Confidence 567899999999 999999999999999999999999999999999999999998 46688999999999999998653
Q ss_pred CCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe-CC-EEEEEeCCCcE
Q 008820 327 GHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC-NG-VLYSGSRDGTI 404 (552)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~-~~-~l~s~~~dg~i 404 (552)
++..+.+|. ....-.+|+|+|++|+|++.|.+-++||+++++.+...+||...|.+++|. ++ ++++|+.|..-
T Consensus 253 ---~l~~l~gH~--~RVs~VafHPsG~~L~TasfD~tWRlWD~~tk~ElL~QEGHs~~v~~iaf~~DGSL~~tGGlD~~~ 327 (459)
T KOG0272|consen 253 ---PLQDLEGHL--ARVSRVAFHPSGKFLGTASFDSTWRLWDLETKSELLLQEGHSKGVFSIAFQPDGSLAATGGLDSLG 327 (459)
T ss_pred ---chhhhhcch--hhheeeeecCCCceeeecccccchhhcccccchhhHhhcccccccceeEecCCCceeeccCccchh
Confidence 444444443 223345899999999999999999999999999999999999999999999 44 99999999999
Q ss_pred EEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEECCCcEEEEeCC--cceeeeecccceEEEEEe---cCCEEEE
Q 008820 405 RLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRND--KFMKSMQTHKGSVFAVFL---EGKWLFT 479 (552)
Q Consensus 405 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~--~~~~~~~~h~~~v~~v~~---~~~~l~s 479 (552)
+|||+++|+++..+.+| ...+.. +.|+|+|..+++|+.|++++|||++ +.+.++.+|.+-|+.+.+ .|.+|+|
T Consensus 328 RvWDlRtgr~im~L~gH-~k~I~~-V~fsPNGy~lATgs~Dnt~kVWDLR~r~~ly~ipAH~nlVS~Vk~~p~~g~fL~T 405 (459)
T KOG0272|consen 328 RVWDLRTGRCIMFLAGH-IKEILS-VAFSPNGYHLATGSSDNTCKVWDLRMRSELYTIPAHSNLVSQVKYSPQEGYFLVT 405 (459)
T ss_pred heeecccCcEEEEeccc-ccceee-EeECCCceEEeecCCCCcEEEeeecccccceecccccchhhheEecccCCeEEEE
Confidence 99999999999999986 455666 6999999999999999999999976 478888999999999887 6889999
Q ss_pred EeCCCeEEEEecCCCeeeeeeccCCCcccCcceEEEEEeCCe--EEEEeCCCeEEEEE
Q 008820 480 GGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQGK--LFVGCADRTVKIAL 535 (552)
Q Consensus 480 gs~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~--l~s~s~Dg~v~iw~ 535 (552)
+|.|+++++|...+..+...+..+ ...|.+++++++. +++++.|.++++|.
T Consensus 406 asyD~t~kiWs~~~~~~~ksLaGH-----e~kV~s~Dis~d~~~i~t~s~DRT~KLW~ 458 (459)
T KOG0272|consen 406 ASYDNTVKIWSTRTWSPLKSLAGH-----EGKVISLDISPDSQAIATSSFDRTIKLWR 458 (459)
T ss_pred cccCcceeeecCCCcccchhhcCC-----ccceEEEEeccCCceEEEeccCceeeecc
Confidence 999999999999988777766554 7789999999644 99999999999996
No 5
>KOG0272 consensus U4/U6 small nuclear ribonucleoprotein Prp4 (contains WD40 repeats) [RNA processing and modification]
Probab=100.00 E-value=2.2e-38 Score=289.08 Aligned_cols=267 Identities=22% Similarity=0.317 Sum_probs=235.2
Q ss_pred CCCCccccceeeecCcceEEEeeCCCeEEEEE---------eecCccceEEEEEc----CCEEEEEeCCCcEEEEeCCCC
Q 008820 216 NSDGADIDQARAAGGVKDLVNGLSKGNVKFKD---------LQGHRDCVTGLAVG----GGFLFSSSFDKSIHVWSLKDF 282 (552)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------l~~H~~~V~~l~~s----~~~l~s~s~dg~I~iwd~~~~ 282 (552)
-.+..++....++.+++.+++++.+|..++|. |.||.+.|.++.|+ +..+|||+.||++++|++++.
T Consensus 172 ~gd~rPis~~~fS~ds~~laT~swsG~~kvW~~~~~~~~~~l~gH~~~v~~~~fhP~~~~~~lat~s~Dgtvklw~~~~e 251 (459)
T KOG0272|consen 172 VGDTRPISGCSFSRDSKHLATGSWSGLVKVWSVPQCNLLQTLRGHTSRVGAAVFHPVDSDLNLATASADGTVKLWKLSQE 251 (459)
T ss_pred ccCCCcceeeEeecCCCeEEEeecCCceeEeecCCcceeEEEeccccceeeEEEccCCCccceeeeccCCceeeeccCCC
Confidence 34556788999999999999999999999986 78999999999999 358999999999999999999
Q ss_pred eEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCC
Q 008820 283 SHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDR 362 (552)
Q Consensus 283 ~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg 362 (552)
.++..+.+|...|..++|+|+|. +|+|++.|.+-++||+++.........+ .. . ....+|.+||..+++|+.|.
T Consensus 252 ~~l~~l~gH~~RVs~VafHPsG~-~L~TasfD~tWRlWD~~tk~ElL~QEGH---s~-~-v~~iaf~~DGSL~~tGGlD~ 325 (459)
T KOG0272|consen 252 TPLQDLEGHLARVSRVAFHPSGK-FLGTASFDSTWRLWDLETKSELLLQEGH---SK-G-VFSIAFQPDGSLAATGGLDS 325 (459)
T ss_pred cchhhhhcchhhheeeeecCCCc-eeeecccccchhhcccccchhhHhhccc---cc-c-cceeEecCCCceeeccCccc
Confidence 99999999999999999999766 7899999999999999976544333322 21 1 12347889999999999999
Q ss_pred cEEEEECCCCceeEEecCCCCCeEEEEEe-CC-EEEEEeCCCcEEEEECCCCceeEEEecCCCCceEEEEEEcC-CCCEE
Q 008820 363 TIKAWSLLDGTLSCTMSGHKSAVSTLAVC-NG-VLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTA-VQHTL 439 (552)
Q Consensus 363 ~i~iwd~~~~~~~~~~~~h~~~v~~l~~~-~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~-~~~~l 439 (552)
.-++||+++|.++..+.+|..+|.+|+|+ ++ .++|||.|++++|||++..+.+.++..|. +.+.. +.|+| .|.+|
T Consensus 326 ~~RvWDlRtgr~im~L~gH~k~I~~V~fsPNGy~lATgs~Dnt~kVWDLR~r~~ly~ipAH~-nlVS~-Vk~~p~~g~fL 403 (459)
T KOG0272|consen 326 LGRVWDLRTGRCIMFLAGHIKEILSVAFSPNGYHLATGSSDNTCKVWDLRMRSELYTIPAHS-NLVSQ-VKYSPQEGYFL 403 (459)
T ss_pred hhheeecccCcEEEEecccccceeeEeECCCceEEeecCCCCcEEEeeecccccceeccccc-chhhh-eEecccCCeEE
Confidence 99999999999999999999999999999 44 89999999999999999999999988874 44444 68887 78999
Q ss_pred EEEECCCcEEEEeCC--cceeeeecccceEEEEEe--cCCEEEEEeCCCeEEEEe
Q 008820 440 VVSHESGSIKVWRND--KFMKSMQTHKGSVFAVFL--EGKWLFTGGWDKTVSVQE 490 (552)
Q Consensus 440 ~~g~~dg~i~iwd~~--~~~~~~~~h~~~v~~v~~--~~~~l~sgs~dg~i~iwd 490 (552)
++++.|++++||... .+++++.||.+.|.++.. |+++++|++.|.++++|.
T Consensus 404 ~TasyD~t~kiWs~~~~~~~ksLaGHe~kV~s~Dis~d~~~i~t~s~DRT~KLW~ 458 (459)
T KOG0272|consen 404 VTASYDNTVKIWSTRTWSPLKSLAGHEGKVISLDISPDSQAIATSSFDRTIKLWR 458 (459)
T ss_pred EEcccCcceeeecCCCcccchhhcCCccceEEEEeccCCceEEEeccCceeeecc
Confidence 999999999999855 589999999999999875 999999999999999995
No 6
>KOG0285 consensus Pleiotropic regulator 1 [RNA processing and modification]
Probab=100.00 E-value=4.2e-36 Score=268.39 Aligned_cols=282 Identities=21% Similarity=0.388 Sum_probs=240.6
Q ss_pred EeecCccceEEEEEc--CCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCC
Q 008820 247 DLQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSF 324 (552)
Q Consensus 247 ~l~~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~ 324 (552)
.+.||.++|.|+++. +.+|+||+.|++|+|||+.+|+...++.||-..|..+++++-.. ++++++.|+.|+.||++.
T Consensus 146 Vi~gHlgWVr~vavdP~n~wf~tgs~DrtikIwDlatg~LkltltGhi~~vr~vavS~rHp-YlFs~gedk~VKCwDLe~ 224 (460)
T KOG0285|consen 146 VISGHLGWVRSVAVDPGNEWFATGSADRTIKIWDLATGQLKLTLTGHIETVRGVAVSKRHP-YLFSAGEDKQVKCWDLEY 224 (460)
T ss_pred hhhhccceEEEEeeCCCceeEEecCCCceeEEEEcccCeEEEeecchhheeeeeeecccCc-eEEEecCCCeeEEEechh
Confidence 378999999999999 89999999999999999999999999999999999999988544 789999999999999985
Q ss_pred CCCCccccccccCCCceeeeEEE--EeeCCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe--CCEEEEEeC
Q 008820 325 PLGHEPLKKWNEEKDWRYSGIHA--LTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC--NGVLYSGSR 400 (552)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~ 400 (552)
. +.++.+.+| ...+.+ +.|.-+.|++|+.|.++++||+++...+..+.+|..+|.++.+. +..+++||.
T Consensus 225 n---kvIR~YhGH----lS~V~~L~lhPTldvl~t~grDst~RvWDiRtr~~V~~l~GH~~~V~~V~~~~~dpqvit~S~ 297 (460)
T KOG0285|consen 225 N---KVIRHYHGH----LSGVYCLDLHPTLDVLVTGGRDSTIRVWDIRTRASVHVLSGHTNPVASVMCQPTDPQVITGSH 297 (460)
T ss_pred h---hhHHHhccc----cceeEEEeccccceeEEecCCcceEEEeeecccceEEEecCCCCcceeEEeecCCCceEEecC
Confidence 4 344444443 334444 45556799999999999999999999999999999999999998 779999999
Q ss_pred CCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEECCCcEEEEeCC--cceeeeecccceEEEEEe-cCCEE
Q 008820 401 DGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRND--KFMKSMQTHKGSVFAVFL-EGKWL 477 (552)
Q Consensus 401 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~--~~~~~~~~h~~~v~~v~~-~~~~l 477 (552)
|++|++||++.|+.+.++..+.. . ..+++.+|....+++++.| .|+-|++. ..++.+.+|..-|++++. +..++
T Consensus 298 D~tvrlWDl~agkt~~tlt~hkk-s-vral~lhP~e~~fASas~d-nik~w~~p~g~f~~nlsgh~~iintl~~nsD~v~ 374 (460)
T KOG0285|consen 298 DSTVRLWDLRAGKTMITLTHHKK-S-VRALCLHPKENLFASASPD-NIKQWKLPEGEFLQNLSGHNAIINTLSVNSDGVL 374 (460)
T ss_pred CceEEEeeeccCceeEeeecccc-e-eeEEecCCchhhhhccCCc-cceeccCCccchhhccccccceeeeeeeccCceE
Confidence 99999999999999999887743 3 3347899999999999888 69999965 456779999999999998 67799
Q ss_pred EEEeCCCeEEEEecCCCeeee---eeccCCCcccCcceEEEEEe--CCeEEEEeCCCeEEEEEecCC
Q 008820 478 FTGGWDKTVSVQELAGDEFEE---DVIPTGAIPCGSVITALLYW--QGKLFVGCADRTVKIALCNRQ 539 (552)
Q Consensus 478 ~sgs~dg~i~iwd~~~~~~~~---~~~~~~~~~~~~~v~~l~~~--~~~l~s~s~Dg~v~iw~~~~~ 539 (552)
++|+++|.+.+||.+++...+ .....+.+.....|.+.+|. ..+|++|..|.+|++|.-+..
T Consensus 375 ~~G~dng~~~fwdwksg~nyQ~~~t~vqpGSl~sEagI~as~fDktg~rlit~eadKtIk~~keDe~ 441 (460)
T KOG0285|consen 375 VSGGDNGSIMFWDWKSGHNYQRGQTIVQPGSLESEAGIFASCFDKTGSRLITGEADKTIKMYKEDEH 441 (460)
T ss_pred EEcCCceEEEEEecCcCcccccccccccCCccccccceeEEeecccCceEEeccCCcceEEEecccc
Confidence 999999999999999774433 23445566667789999998 356999999999999987644
No 7
>KOG0281 consensus Beta-TrCP (transducin repeats containing)/Slimb proteins [Function unknown]
Probab=100.00 E-value=7.1e-38 Score=278.61 Aligned_cols=275 Identities=21% Similarity=0.339 Sum_probs=236.5
Q ss_pred cCccceEEEEEcCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCc
Q 008820 250 GHRDCVTGLAVGGGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHE 329 (552)
Q Consensus 250 ~H~~~V~~l~~s~~~l~s~s~dg~I~iwd~~~~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~ 329 (552)
.....|.|+.+....+++|..|++|+|||.++..+.+.+.||++.|.|+.| +..++++|+.|.+|++||++++...+
T Consensus 195 e~skgVYClQYDD~kiVSGlrDnTikiWD~n~~~c~~~L~GHtGSVLCLqy---d~rviisGSSDsTvrvWDv~tge~l~ 271 (499)
T KOG0281|consen 195 ENSKGVYCLQYDDEKIVSGLRDNTIKIWDKNSLECLKILTGHTGSVLCLQY---DERVIVSGSSDSTVRVWDVNTGEPLN 271 (499)
T ss_pred ccCCceEEEEecchhhhcccccCceEEeccccHHHHHhhhcCCCcEEeeec---cceEEEecCCCceEEEEeccCCchhh
Confidence 356789999999999999999999999999999999999999999999998 55699999999999999999876555
Q ss_pred cccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCc---eeEEecCCCCCeEEEEEeCCEEEEEeCCCcEEE
Q 008820 330 PLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGT---LSCTMSGHKSAVSTLAVCNGVLYSGSRDGTIRL 406 (552)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~---~~~~~~~h~~~v~~l~~~~~~l~s~~~dg~i~i 406 (552)
.+.. +...+..+-.++.++++++.|.++.+||+.... +.+.+.||...|+.+.|++.++++++.|.+|++
T Consensus 272 tlih-------HceaVLhlrf~ng~mvtcSkDrsiaVWdm~sps~it~rrVLvGHrAaVNvVdfd~kyIVsASgDRTikv 344 (499)
T KOG0281|consen 272 TLIH-------HCEAVLHLRFSNGYMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKV 344 (499)
T ss_pred HHhh-------hcceeEEEEEeCCEEEEecCCceeEEEeccCchHHHHHHHHhhhhhheeeeccccceEEEecCCceEEE
Confidence 4433 333566778888999999999999999997654 344678999999999999999999999999999
Q ss_pred EECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEECCCcEEEEeC--CcceeeeecccceEEEEEecCCEEEEEeCCC
Q 008820 407 WSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRN--DKFMKSMQTHKGSVFAVFLEGKWLFTGGWDK 484 (552)
Q Consensus 407 wd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~--~~~~~~~~~h~~~v~~v~~~~~~l~sgs~dg 484 (552)
|++.+++.+.++.+|..+. .+..-.++++++|+.|.+|++||. +.+++.+++|+.-|.++.||.+.+++|+.||
T Consensus 345 W~~st~efvRtl~gHkRGI----AClQYr~rlvVSGSSDntIRlwdi~~G~cLRvLeGHEeLvRciRFd~krIVSGaYDG 420 (499)
T KOG0281|consen 345 WSTSTCEFVRTLNGHKRGI----ACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDG 420 (499)
T ss_pred Eeccceeeehhhhcccccc----eehhccCeEEEecCCCceEEEEeccccHHHHHHhchHHhhhheeecCceeeeccccc
Confidence 9999999999998875543 456667999999999999999995 5789999999999999999999999999999
Q ss_pred eEEEEecCCCeeee----eeccCCCcccCcceEEEEEeCCeEEEEeCCCeEEEEEecC
Q 008820 485 TVSVQELAGDEFEE----DVIPTGAIPCGSVITALLYWQGKLFVGCADRTVKIALCNR 538 (552)
Q Consensus 485 ~i~iwd~~~~~~~~----~~~~~~~~~~~~~v~~l~~~~~~l~s~s~Dg~v~iw~~~~ 538 (552)
+|++||+..+.-.. ++-....+.+.+.|..+.|..-++++++.|.+|-|||+..
T Consensus 421 kikvWdl~aaldpra~~~~~Cl~~lv~hsgRVFrLQFD~fqIvsssHddtILiWdFl~ 478 (499)
T KOG0281|consen 421 KIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIWDFLN 478 (499)
T ss_pred eEEEEecccccCCcccccchHHHhhhhccceeEEEeecceEEEeccCCCeEEEEEcCC
Confidence 99999998653221 1111222345778999999888999999999999999974
No 8
>KOG0286 consensus G-protein beta subunit [General function prediction only]
Probab=100.00 E-value=4.9e-35 Score=255.15 Aligned_cols=279 Identities=17% Similarity=0.253 Sum_probs=235.7
Q ss_pred EEeecCccceEEEEEc--CCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCC
Q 008820 246 KDLQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFS 323 (552)
Q Consensus 246 ~~l~~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~ 323 (552)
+.|+||.+.|.++.|+ .++++++|.||.+.|||.-+....+.++-....|..++|+|.++ ++++|+.|+...||++.
T Consensus 49 r~LkGH~~Ki~~~~ws~Dsr~ivSaSqDGklIvWDs~TtnK~haipl~s~WVMtCA~sPSg~-~VAcGGLdN~Csiy~ls 127 (343)
T KOG0286|consen 49 RTLKGHLNKIYAMDWSTDSRRIVSASQDGKLIVWDSFTTNKVHAIPLPSSWVMTCAYSPSGN-FVACGGLDNKCSIYPLS 127 (343)
T ss_pred EEecccccceeeeEecCCcCeEEeeccCCeEEEEEcccccceeEEecCceeEEEEEECCCCC-eEEecCcCceeEEEecc
Confidence 6799999999999999 89999999999999999999998999998999999999999665 88999999999999998
Q ss_pred CCCCC---ccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEeC---CEEEE
Q 008820 324 FPLGH---EPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVCN---GVLYS 397 (552)
Q Consensus 324 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~---~~l~s 397 (552)
+.... ...+.+..|..+ . .+..|. +...|++++.|.++.+||+++++.+..|.+|.+.|.++.+++ +.+++
T Consensus 128 ~~d~~g~~~v~r~l~gHtgy-l-ScC~f~-dD~~ilT~SGD~TCalWDie~g~~~~~f~GH~gDV~slsl~p~~~ntFvS 204 (343)
T KOG0286|consen 128 TRDAEGNVRVSRELAGHTGY-L-SCCRFL-DDNHILTGSGDMTCALWDIETGQQTQVFHGHTGDVMSLSLSPSDGNTFVS 204 (343)
T ss_pred cccccccceeeeeecCccce-e-EEEEEc-CCCceEecCCCceEEEEEcccceEEEEecCCcccEEEEecCCCCCCeEEe
Confidence 65322 233334444432 2 222333 356899999999999999999999999999999999999984 59999
Q ss_pred EeCCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEECCCcEEEEeCCc--ceeeeec--ccceEEEEEe-
Q 008820 398 GSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDK--FMKSMQT--HKGSVFAVFL- 472 (552)
Q Consensus 398 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~~--~~~~~~~--h~~~v~~v~~- 472 (552)
|+.|++.++||+|.+.++++|.+|. ..+.+ +.|.|+|.-+++|+.|++.++||++. .+..+.. -..+|+++.|
T Consensus 205 g~cD~~aklWD~R~~~c~qtF~ghe-sDINs-v~ffP~G~afatGSDD~tcRlyDlRaD~~~a~ys~~~~~~gitSv~FS 282 (343)
T KOG0286|consen 205 GGCDKSAKLWDVRSGQCVQTFEGHE-SDINS-VRFFPSGDAFATGSDDATCRLYDLRADQELAVYSHDSIICGITSVAFS 282 (343)
T ss_pred cccccceeeeeccCcceeEeecccc-cccce-EEEccCCCeeeecCCCceeEEEeecCCcEEeeeccCcccCCceeEEEc
Confidence 9999999999999999999999885 44555 69999999999999999999999875 4444442 2357788888
Q ss_pred -cCCEEEEEeCCCeEEEEecCCCeeeeeeccCCCcccCcceEEEEEeCCe--EEEEeCCCeEEEEE
Q 008820 473 -EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQGK--LFVGCADRTVKIAL 535 (552)
Q Consensus 473 -~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~--l~s~s~Dg~v~iw~ 535 (552)
.|++|++|..|.++.+||.-.++....+..+ ...|+++..+|+. +++||.|..+|||.
T Consensus 283 ~SGRlLfagy~d~~c~vWDtlk~e~vg~L~GH-----eNRvScl~~s~DG~av~TgSWDs~lriW~ 343 (343)
T KOG0286|consen 283 KSGRLLFAGYDDFTCNVWDTLKGERVGVLAGH-----ENRVSCLGVSPDGMAVATGSWDSTLRIWA 343 (343)
T ss_pred ccccEEEeeecCCceeEeeccccceEEEeecc-----CCeeEEEEECCCCcEEEecchhHheeecC
Confidence 8999999999999999999877766665543 7789999999654 88999999999994
No 9
>KOG0313 consensus Microtubule binding protein YTM1 (contains WD40 repeats) [Cytoskeleton]
Probab=100.00 E-value=2.2e-35 Score=266.03 Aligned_cols=358 Identities=20% Similarity=0.297 Sum_probs=267.1
Q ss_pred hcccCCCCCcch---hhHHHHHHhhhcCccccccccccccccccccccccccccccCCCcccccccchhhhcCCCCCCCc
Q 008820 144 CLNFDPGCRPLL---TNVWKCIRELIIKPEFDKMIRFAGPVNLENENHCLVLGELSCLPKERLETEDKDELLGAENSDGA 220 (552)
Q Consensus 144 ~l~~~p~~R~~~---~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (552)
.....|..-|+. .++...++.++ +....+....+|+|++.+++.+.+...+..... .+.+.
T Consensus 20 aVpD~p~~iP~~~~r~gLs~ivN~ll---------~se~~~~K~~pFDFLi~gelLRtsL~e~l~~kg---iSsE~---- 83 (423)
T KOG0313|consen 20 AVPDVPFAIPTSVERYGLSNIVNKLL---------KSENGFWKPVPFDFLIKGELLRTSLDEHLEEKG---ISSEE---- 83 (423)
T ss_pred CCCCcceeccCcceEccHHHHHHHHH---------hccCCcCCCCcceEEEcceeeeccHHHHHHHcC---cChhh----
Confidence 344455555653 25555666655 224445677899999999999998876442221 11111
Q ss_pred cccceeeecCcceEEEeeCCCeEEEEEeecCccceEEEEEcCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEE
Q 008820 221 DIDQARAAGGVKDLVNGLSKGNVKFKDLQGHRDCVTGLAVGGGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVY 300 (552)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~H~~~V~~l~~s~~~l~s~s~dg~I~iwd~~~~~~~~~~~~h~~~v~~v~~ 300 (552)
+.. ..++-+...+ ..+ .---|.++|.++...+++++||++||++++||. .|+...++.+|.++|.+++|
T Consensus 84 -~le-------IEYv~~~~aP-~pl-~~~~hdDWVSsv~~~~~~IltgsYDg~~riWd~-~Gk~~~~~~Ght~~ik~v~~ 152 (423)
T KOG0313|consen 84 -ILE-------IEYVEAITAP-KPL-QCFLHDDWVSSVKGASKWILTGSYDGTSRIWDL-KGKSIKTIVGHTGPIKSVAW 152 (423)
T ss_pred -eeE-------EEEEEecCCC-Ccc-ccccchhhhhhhcccCceEEEeecCCeeEEEec-CCceEEEEecCCcceeeeEE
Confidence 000 1111111111 111 123599999999999999999999999999995 68999999999999999998
Q ss_pred ecCCC--CEEEEEcCCCcEEEEeCCCCCCCcccc-ccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCC------
Q 008820 301 VDEDQ--PLCISGDSGGGIFVWSFSFPLGHEPLK-KWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLD------ 371 (552)
Q Consensus 301 ~~~~~--~~l~s~~~dg~i~vwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~------ 371 (552)
...+. ..+++++.|.++++|.++.+....... ...+|.. . ....+...++..+++|+.|.+|++|+..+
T Consensus 153 v~~n~~~~~fvsas~Dqtl~Lw~~~~~~~~~~~~~~~~GHk~-~-V~sVsv~~sgtr~~SgS~D~~lkiWs~~~~~~~~~ 230 (423)
T KOG0313|consen 153 VIKNSSSCLFVSASMDQTLRLWKWNVGENKVKALKVCRGHKR-S-VDSVSVDSSGTRFCSGSWDTMLKIWSVETDEEDEL 230 (423)
T ss_pred EecCCccceEEEecCCceEEEEEecCchhhhhHHhHhccccc-c-eeEEEecCCCCeEEeecccceeeecccCCCccccc
Confidence 75433 468999999999999998765433222 2223322 1 12235567888999999999999999321
Q ss_pred -------------------CceeEEecCCCCCeEEEEEe-CCEEEEEeCCCcEEEEECCCCceeEEEecCCCCceEEEEE
Q 008820 372 -------------------GTLSCTMSGHKSAVSTLAVC-NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLS 431 (552)
Q Consensus 372 -------------------~~~~~~~~~h~~~v~~l~~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 431 (552)
+.++.++.+|..+|.++.|+ ...+++++.|.+|+.||+.++..+.++.... ...+ +.
T Consensus 231 E~~s~~rrk~~~~~~~~~~r~P~vtl~GHt~~Vs~V~w~d~~v~yS~SwDHTIk~WDletg~~~~~~~~~k--sl~~-i~ 307 (423)
T KOG0313|consen 231 ESSSNRRRKKQKREKEGGTRTPLVTLEGHTEPVSSVVWSDATVIYSVSWDHTIKVWDLETGGLKSTLTTNK--SLNC-IS 307 (423)
T ss_pred cccchhhhhhhhhhhcccccCceEEecccccceeeEEEcCCCceEeecccceEEEEEeecccceeeeecCc--ceeE-ee
Confidence 24566789999999999999 5599999999999999999999988887642 2344 68
Q ss_pred EcCCCCEEEEEECCCcEEEEeCCc-----ceeeeecccceEEEEEe---cCCEEEEEeCCCeEEEEecCCCe-eeeeecc
Q 008820 432 LTAVQHTLVVSHESGSIKVWRNDK-----FMKSMQTHKGSVFAVFL---EGKWLFTGGWDKTVSVQELAGDE-FEEDVIP 502 (552)
Q Consensus 432 ~s~~~~~l~~g~~dg~i~iwd~~~-----~~~~~~~h~~~v~~v~~---~~~~l~sgs~dg~i~iwd~~~~~-~~~~~~~ 502 (552)
.+|..++|++|+.|..+++||.++ ..+++.+|.+.|.++.| +...|++|+.|+++++||+++.. ....+..
T Consensus 308 ~~~~~~Ll~~gssdr~irl~DPR~~~gs~v~~s~~gH~nwVssvkwsp~~~~~~~S~S~D~t~klWDvRS~k~plydI~~ 387 (423)
T KOG0313|consen 308 YSPLSKLLASGSSDRHIRLWDPRTGDGSVVSQSLIGHKNWVSSVKWSPTNEFQLVSGSYDNTVKLWDVRSTKAPLYDIAG 387 (423)
T ss_pred cccccceeeecCCCCceeecCCCCCCCceeEEeeecchhhhhheecCCCCceEEEEEecCCeEEEEEeccCCCcceeecc
Confidence 899999999999999999999764 46788999999999987 77899999999999999999765 3333333
Q ss_pred CCCcccCcceEEEEEeCC-eEEEEeCCCeEEEEEecC
Q 008820 503 TGAIPCGSVITALLYWQG-KLFVGCADRTVKIALCNR 538 (552)
Q Consensus 503 ~~~~~~~~~v~~l~~~~~-~l~s~s~Dg~v~iw~~~~ 538 (552)
+ ...|.++.|..+ .+++|+.|.+|+|+.-..
T Consensus 388 h-----~DKvl~vdW~~~~~IvSGGaD~~l~i~~~~~ 419 (423)
T KOG0313|consen 388 H-----NDKVLSVDWNEGGLIVSGGADNKLRIFKGSP 419 (423)
T ss_pred C-----CceEEEEeccCCceEEeccCcceEEEecccc
Confidence 2 778999999965 799999999999998663
No 10
>KOG0315 consensus G-protein beta subunit-like protein (contains WD40 repeats) [General function prediction only]
Probab=100.00 E-value=3.9e-35 Score=250.03 Aligned_cols=278 Identities=21% Similarity=0.319 Sum_probs=228.8
Q ss_pred CCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCccccccccCCCce
Q 008820 262 GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWR 341 (552)
Q Consensus 262 ~~~l~s~s~dg~I~iwd~~~~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~ 341 (552)
.-+|+|+|.|.+||+|...+|.+..+++...+.|+.+...|+.. .|++++ ...||+||+++.... ++..+..+..
T Consensus 10 ~viLvsA~YDhTIRfWqa~tG~C~rTiqh~dsqVNrLeiTpdk~-~LAaa~-~qhvRlyD~~S~np~-Pv~t~e~h~k-- 84 (311)
T KOG0315|consen 10 PVILVSAGYDHTIRFWQALTGICSRTIQHPDSQVNRLEITPDKK-DLAAAG-NQHVRLYDLNSNNPN-PVATFEGHTK-- 84 (311)
T ss_pred ceEEEeccCcceeeeeehhcCeEEEEEecCccceeeEEEcCCcc-hhhhcc-CCeeEEEEccCCCCC-ceeEEeccCC--
Confidence 34799999999999999999999999998889999999999766 444443 578999999987654 6666666543
Q ss_pred eeeEEEEeeCCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEeCC--EEEEEeCCCcEEEEECCCCceeEEEe
Q 008820 342 YSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVCNG--VLYSGSRDGTIRLWSLSDHSLLTVLE 419 (552)
Q Consensus 342 ~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~--~l~s~~~dg~i~iwd~~~~~~~~~~~ 419 (552)
......|..+|+.+++|++||+++|||++...+.+.+. |..+|+++..+++ .|++|..+|.|++||+.+..+...+.
T Consensus 85 NVtaVgF~~dgrWMyTgseDgt~kIWdlR~~~~qR~~~-~~spVn~vvlhpnQteLis~dqsg~irvWDl~~~~c~~~li 163 (311)
T KOG0315|consen 85 NVTAVGFQCDGRWMYTGSEDGTVKIWDLRSLSCQRNYQ-HNSPVNTVVLHPNQTELISGDQSGNIRVWDLGENSCTHELI 163 (311)
T ss_pred ceEEEEEeecCeEEEecCCCceEEEEeccCcccchhcc-CCCCcceEEecCCcceEEeecCCCcEEEEEccCCccccccC
Confidence 12345788899999999999999999999977776666 7799999999944 99999999999999999988877776
Q ss_pred cCCCCceEEEEEEcCCCCEEEEEECCCcEEEEeCC--------cceeeeecccceEEEEE--ecCCEEEEEeCCCeEEEE
Q 008820 420 EDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRND--------KFMKSMQTHKGSVFAVF--LEGKWLFTGGWDKTVSVQ 489 (552)
Q Consensus 420 ~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~--------~~~~~~~~h~~~v~~v~--~~~~~l~sgs~dg~i~iw 489 (552)
......+.+ +.+.|||.+++.+...|+.++|++- .++..++.|.+.+..+. +|+++|+++|.|.+++||
T Consensus 164 Pe~~~~i~s-l~v~~dgsml~a~nnkG~cyvW~l~~~~~~s~l~P~~k~~ah~~~il~C~lSPd~k~lat~ssdktv~iw 242 (311)
T KOG0315|consen 164 PEDDTSIQS-LTVMPDGSMLAAANNKGNCYVWRLLNHQTASELEPVHKFQAHNGHILRCLLSPDVKYLATCSSDKTVKIW 242 (311)
T ss_pred CCCCcceee-EEEcCCCcEEEEecCCccEEEEEccCCCccccceEhhheecccceEEEEEECCCCcEEEeecCCceEEEE
Confidence 554444444 7999999999999999999999943 35667889999887754 599999999999999999
Q ss_pred ecCCCeeeeeeccCCCcccCcceEEEEEe-C-CeEEEEeCCCeEEEEEecCCcceeEEEecccc
Q 008820 490 ELAGDEFEEDVIPTGAIPCGSVITALLYW-Q-GKLFVGCADRTVKIALCNRQIPEIFSLLLHIN 551 (552)
Q Consensus 490 d~~~~~~~~~~~~~~~~~~~~~v~~l~~~-~-~~l~s~s~Dg~v~iw~~~~~~~~~~~~~gh~~ 551 (552)
+.++- +.......++ ...+...+|+ + .+|++|+.|+.+++|+++ ..+++....||..
T Consensus 243 n~~~~-~kle~~l~gh---~rWvWdc~FS~dg~YlvTassd~~~rlW~~~-~~k~v~qy~gh~K 301 (311)
T KOG0315|consen 243 NTDDF-FKLELVLTGH---QRWVWDCAFSADGEYLVTASSDHTARLWDLS-AGKEVRQYQGHHK 301 (311)
T ss_pred ecCCc-eeeEEEeecC---CceEEeeeeccCccEEEecCCCCceeecccc-cCceeeecCCccc
Confidence 99887 3333333222 5679999999 4 459999999999999998 6778899999863
No 11
>KOG0279 consensus G protein beta subunit-like protein [Signal transduction mechanisms]
Probab=100.00 E-value=3.6e-34 Score=248.35 Aligned_cols=286 Identities=23% Similarity=0.359 Sum_probs=227.2
Q ss_pred EEEEEeecCccceEEEEEc---CCEEEEEeCCCcEEEEeCC-----CCeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCC
Q 008820 243 VKFKDLQGHRDCVTGLAVG---GGFLFSSSFDKSIHVWSLK-----DFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSG 314 (552)
Q Consensus 243 ~~~~~l~~H~~~V~~l~~s---~~~l~s~s~dg~I~iwd~~-----~~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~d 314 (552)
+..-++++|.+.|+.++.. .+.+++++.|.++.+|++. .|.+++.++||+..|..++.+++++ ++++++.|
T Consensus 6 ~l~~tl~gh~d~Vt~la~~~~~~~~l~sasrDk~ii~W~L~~dd~~~G~~~r~~~GHsH~v~dv~~s~dg~-~alS~swD 84 (315)
T KOG0279|consen 6 VLRGTLEGHTDWVTALAIKIKNSDILVSASRDKTIIVWKLTSDDIKYGVPVRRLTGHSHFVSDVVLSSDGN-FALSASWD 84 (315)
T ss_pred eeeeeecCCCceEEEEEeecCCCceEEEcccceEEEEEEeccCccccCceeeeeeccceEecceEEccCCc-eEEecccc
Confidence 3445689999999999998 7899999999999999875 4678999999999999999999665 78999999
Q ss_pred CcEEEEeCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCceeEEecCC--CCCeEEEEEeC
Q 008820 315 GGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGH--KSAVSTLAVCN 392 (552)
Q Consensus 315 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h--~~~v~~l~~~~ 392 (552)
+++++||+.+++... .+.+|... .-..+++++++.+++|+.|.+|++||.. +.+..++..+ .+.|+|+.|++
T Consensus 85 ~~lrlWDl~~g~~t~---~f~GH~~d--Vlsva~s~dn~qivSGSrDkTiklwnt~-g~ck~t~~~~~~~~WVscvrfsP 158 (315)
T KOG0279|consen 85 GTLRLWDLATGESTR---RFVGHTKD--VLSVAFSTDNRQIVSGSRDKTIKLWNTL-GVCKYTIHEDSHREWVSCVRFSP 158 (315)
T ss_pred ceEEEEEecCCcEEE---EEEecCCc--eEEEEecCCCceeecCCCcceeeeeeec-ccEEEEEecCCCcCcEEEEEEcC
Confidence 999999999874433 33343321 1234788899999999999999999985 4555555433 78999999993
Q ss_pred C----EEEEEeCCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEECCCcEEEEeCCcceee-eecccceE
Q 008820 393 G----VLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDKFMKS-MQTHKGSV 467 (552)
Q Consensus 393 ~----~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~~~~~~-~~~h~~~v 467 (552)
+ .|++++.|+++++||+++.+....+.+| .+.+.. +.+||||.++++|+.||.+.+||+++.... ...|...|
T Consensus 159 ~~~~p~Ivs~s~DktvKvWnl~~~~l~~~~~gh-~~~v~t-~~vSpDGslcasGgkdg~~~LwdL~~~k~lysl~a~~~v 236 (315)
T KOG0279|consen 159 NESNPIIVSASWDKTVKVWNLRNCQLRTTFIGH-SGYVNT-VTVSPDGSLCASGGKDGEAMLWDLNEGKNLYSLEAFDIV 236 (315)
T ss_pred CCCCcEEEEccCCceEEEEccCCcchhhccccc-cccEEE-EEECCCCCEEecCCCCceEEEEEccCCceeEeccCCCeE
Confidence 3 8999999999999999999988888876 345555 699999999999999999999998754432 34578899
Q ss_pred EEEEe-cCCEEEEEeCCCeEEEEecCCCeeeeeeccCCCc----ccCcceEEEEEe-CC-eEEEEeCCCeEEEEEec
Q 008820 468 FAVFL-EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAI----PCGSVITALLYW-QG-KLFVGCADRTVKIALCN 537 (552)
Q Consensus 468 ~~v~~-~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~----~~~~~v~~l~~~-~~-~l~s~s~Dg~v~iw~~~ 537 (552)
.+++| -.++.++...+..|+|||+.+..+...+...... .....+.+++|+ ++ .|++|-.|+.|++|.+.
T Consensus 237 ~sl~fspnrywL~~at~~sIkIwdl~~~~~v~~l~~d~~g~s~~~~~~~clslaws~dG~tLf~g~td~~irv~qv~ 313 (315)
T KOG0279|consen 237 NSLCFSPNRYWLCAATATSIKIWDLESKAVVEELKLDGIGPSSKAGDPICLSLAWSADGQTLFAGYTDNVIRVWQVA 313 (315)
T ss_pred eeEEecCCceeEeeccCCceEEEeccchhhhhhccccccccccccCCcEEEEEEEcCCCcEEEeeecCCcEEEEEee
Confidence 99988 3444455555677999999988766554433221 123457788999 34 49999999999999975
No 12
>KOG0281 consensus Beta-TrCP (transducin repeats containing)/Slimb proteins [Function unknown]
Probab=100.00 E-value=2.7e-36 Score=268.55 Aligned_cols=255 Identities=25% Similarity=0.434 Sum_probs=225.0
Q ss_pred CcceEEEeeCCCeEEEEE---------eecCccceEEEEEcCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEE
Q 008820 230 GVKDLVNGLSKGNVKFKD---------LQGHRDCVTGLAVGGGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVY 300 (552)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~---------l~~H~~~V~~l~~s~~~l~s~s~dg~I~iwd~~~~~~~~~~~~h~~~v~~v~~ 300 (552)
++..++++..+.++++|+ |.||++.|.|+.|..+.+++||.|.+|+|||+++++++.++-+|.+.|..+.|
T Consensus 206 DD~kiVSGlrDnTikiWD~n~~~c~~~L~GHtGSVLCLqyd~rviisGSSDsTvrvWDv~tge~l~tlihHceaVLhlrf 285 (499)
T KOG0281|consen 206 DDEKIVSGLRDNTIKIWDKNSLECLKILTGHTGSVLCLQYDERVIVSGSSDSTVRVWDVNTGEPLNTLIHHCEAVLHLRF 285 (499)
T ss_pred cchhhhcccccCceEEeccccHHHHHhhhcCCCcEEeeeccceEEEecCCCceEEEEeccCCchhhHHhhhcceeEEEEE
Confidence 456788999999999998 67999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCEEEEEcCCCcEEEEeCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCceeEEecC
Q 008820 301 VDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSG 380 (552)
Q Consensus 301 ~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~ 380 (552)
+. .++++++.|.++.+||+..+........+.++ ...+..+..+.+++++++.|.+|++|++.+++.++++.+
T Consensus 286 ~n---g~mvtcSkDrsiaVWdm~sps~it~rrVLvGH----rAaVNvVdfd~kyIVsASgDRTikvW~~st~efvRtl~g 358 (499)
T KOG0281|consen 286 SN---GYMVTCSKDRSIAVWDMASPTDITLRRVLVGH----RAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNG 358 (499)
T ss_pred eC---CEEEEecCCceeEEEeccCchHHHHHHHHhhh----hhheeeeccccceEEEecCCceEEEEeccceeeehhhhc
Confidence 53 48899999999999999987755544555443 345667788899999999999999999999999999999
Q ss_pred CCCCeEEEEEeCCEEEEEeCCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEECCCcEEEEeCCc-----
Q 008820 381 HKSAVSTLAVCNGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDK----- 455 (552)
Q Consensus 381 h~~~v~~l~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~~----- 455 (552)
|...|-|+.+.+.++++|+.|.+|++||+..|.++..+++|.. .+. ++-.|.+.+++|..||+|++||+..
T Consensus 359 HkRGIAClQYr~rlvVSGSSDntIRlwdi~~G~cLRvLeGHEe-LvR---ciRFd~krIVSGaYDGkikvWdl~aaldpr 434 (499)
T KOG0281|consen 359 HKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEE-LVR---CIRFDNKRIVSGAYDGKIKVWDLQAALDPR 434 (499)
T ss_pred ccccceehhccCeEEEecCCCceEEEEeccccHHHHHHhchHH-hhh---heeecCceeeeccccceEEEEecccccCCc
Confidence 9999999999999999999999999999999999999988743 333 3344678899999999999999542
Q ss_pred ------ceeeeecccceEEEEEecCCEEEEEeCCCeEEEEecCCCe
Q 008820 456 ------FMKSMQTHKGSVFAVFLEGKWLFTGGWDKTVSVQELAGDE 495 (552)
Q Consensus 456 ------~~~~~~~h~~~v~~v~~~~~~l~sgs~dg~i~iwd~~~~~ 495 (552)
++..+..|++.|..+.||...+++++.|.+|-|||+.++.
T Consensus 435 a~~~~~Cl~~lv~hsgRVFrLQFD~fqIvsssHddtILiWdFl~~~ 480 (499)
T KOG0281|consen 435 APASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIWDFLNGP 480 (499)
T ss_pred ccccchHHHhhhhccceeEEEeecceEEEeccCCCeEEEEEcCCCC
Confidence 4556677999999999999999999999999999997653
No 13
>KOG0286 consensus G-protein beta subunit [General function prediction only]
Probab=100.00 E-value=3.7e-33 Score=243.44 Aligned_cols=265 Identities=18% Similarity=0.297 Sum_probs=225.6
Q ss_pred CccccceeeecCcceEEEeeCCCeEEEEEe---------ecCccceEEEEEc--CCEEEEEeCCCcEEEEeCCCC-----
Q 008820 219 GADIDQARAAGGVKDLVNGLSKGNVKFKDL---------QGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDF----- 282 (552)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l---------~~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~----- 282 (552)
...+....++.+.+++++++.+|.+.+|+. .--..+|..++|+ ++++|+|+.|+...||++.+.
T Consensus 55 ~~Ki~~~~ws~Dsr~ivSaSqDGklIvWDs~TtnK~haipl~s~WVMtCA~sPSg~~VAcGGLdN~Csiy~ls~~d~~g~ 134 (343)
T KOG0286|consen 55 LNKIYAMDWSTDSRRIVSASQDGKLIVWDSFTTNKVHAIPLPSSWVMTCAYSPSGNFVACGGLDNKCSIYPLSTRDAEGN 134 (343)
T ss_pred ccceeeeEecCCcCeEEeeccCCeEEEEEcccccceeEEecCceeEEEEEECCCCCeEEecCcCceeEEEeccccccccc
Confidence 345788889999999999999999999983 3346789999999 999999999999999999865
Q ss_pred -eEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCccccccccCCCceeeeEEEEee-CCCEEEEeeC
Q 008820 283 -SHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTT-SGRYLYTGSG 360 (552)
Q Consensus 283 -~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~sgs~ 360 (552)
+..+.+.+|.+.+.++.|.+++ .+++++.|.+..+||+++++.... +.+|... . -..+++| +++.+++|+.
T Consensus 135 ~~v~r~l~gHtgylScC~f~dD~--~ilT~SGD~TCalWDie~g~~~~~---f~GH~gD-V-~slsl~p~~~ntFvSg~c 207 (343)
T KOG0286|consen 135 VRVSRELAGHTGYLSCCRFLDDN--HILTGSGDMTCALWDIETGQQTQV---FHGHTGD-V-MSLSLSPSDGNTFVSGGC 207 (343)
T ss_pred ceeeeeecCccceeEEEEEcCCC--ceEecCCCceEEEEEcccceEEEE---ecCCccc-E-EEEecCCCCCCeEEeccc
Confidence 4557789999999999998743 579999999999999998754444 4444332 1 1246677 7889999999
Q ss_pred CCcEEEEECCCCceeEEecCCCCCeEEEEEe-CC-EEEEEeCCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCE
Q 008820 361 DRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC-NG-VLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHT 438 (552)
Q Consensus 361 dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~-~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ 438 (552)
|+..++||++.+.++++|.+|...|+++.|. ++ -+++|+.|+++|+||+|..+.+..+...........++||..|++
T Consensus 208 D~~aklWD~R~~~c~qtF~ghesDINsv~ffP~G~afatGSDD~tcRlyDlRaD~~~a~ys~~~~~~gitSv~FS~SGRl 287 (343)
T KOG0286|consen 208 DKSAKLWDVRSGQCVQTFEGHESDINSVRFFPSGDAFATGSDDATCRLYDLRADQELAVYSHDSIICGITSVAFSKSGRL 287 (343)
T ss_pred ccceeeeeccCcceeEeecccccccceEEEccCCCeeeecCCCceeEEEeecCCcEEeeeccCcccCCceeEEEcccccE
Confidence 9999999999999999999999999999999 33 899999999999999999999988876543333334799999999
Q ss_pred EEEEECCCcEEEEeC--CcceeeeecccceEEEEE--ecCCEEEEEeCCCeEEEEe
Q 008820 439 LVVSHESGSIKVWRN--DKFMKSMQTHKGSVFAVF--LEGKWLFTGGWDKTVSVQE 490 (552)
Q Consensus 439 l~~g~~dg~i~iwd~--~~~~~~~~~h~~~v~~v~--~~~~~l~sgs~dg~i~iwd 490 (552)
|++|..|.++.+||. ++.+..+.+|.+.|.++. +||..+++||+|.+++||.
T Consensus 288 Lfagy~d~~c~vWDtlk~e~vg~L~GHeNRvScl~~s~DG~av~TgSWDs~lriW~ 343 (343)
T KOG0286|consen 288 LFAGYDDFTCNVWDTLKGERVGVLAGHENRVSCLGVSPDGMAVATGSWDSTLRIWA 343 (343)
T ss_pred EEeeecCCceeEeeccccceEEEeeccCCeeEEEEECCCCcEEEecchhHheeecC
Confidence 999999999999994 456778899999999986 5999999999999999994
No 14
>KOG0295 consensus WD40 repeat-containing protein [Function unknown]
Probab=100.00 E-value=8.3e-34 Score=254.53 Aligned_cols=280 Identities=23% Similarity=0.330 Sum_probs=236.6
Q ss_pred EEEeecCccceEEEEEc--CCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeC
Q 008820 245 FKDLQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSF 322 (552)
Q Consensus 245 ~~~l~~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~ 322 (552)
...+.||..+|+.+-|+ -..+++++.|++|++||..++++...+++|.+.|.+++|...+ .++++++.|-.+++||.
T Consensus 101 ~~~l~g~r~~vt~v~~hp~~~~v~~as~d~tikv~D~~tg~~e~~LrGHt~sv~di~~~a~G-k~l~tcSsDl~~~LWd~ 179 (406)
T KOG0295|consen 101 VQKLAGHRSSVTRVIFHPSEALVVSASEDATIKVFDTETGELERSLRGHTDSVFDISFDASG-KYLATCSSDLSAKLWDF 179 (406)
T ss_pred hhhhhccccceeeeeeccCceEEEEecCCceEEEEEccchhhhhhhhccccceeEEEEecCc-cEEEecCCccchhheeH
Confidence 45578999999999999 5678888899999999999999999999999999999998865 58899999999999998
Q ss_pred CCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe-CC-EEEEEeC
Q 008820 323 SFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC-NG-VLYSGSR 400 (552)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~-~~-~l~s~~~ 400 (552)
++. ...++...++. +.....++-|.|+++++++.|.+|+.|++.++-++.++.+|...|..+..+ |+ .+++++.
T Consensus 180 ~~~--~~c~ks~~gh~--h~vS~V~f~P~gd~ilS~srD~tik~We~~tg~cv~t~~~h~ewvr~v~v~~DGti~As~s~ 255 (406)
T KOG0295|consen 180 DTF--FRCIKSLIGHE--HGVSSVFFLPLGDHILSCSRDNTIKAWECDTGYCVKTFPGHSEWVRMVRVNQDGTIIASCSN 255 (406)
T ss_pred HHH--HHHHHHhcCcc--cceeeEEEEecCCeeeecccccceeEEecccceeEEeccCchHhEEEEEecCCeeEEEecCC
Confidence 853 23334333333 344456788889999999999999999999999999999999999999999 55 8899999
Q ss_pred CCcEEEEECCCCceeEEEecCCCCceEEEEEEcC---------------CCCEEEEEECCCcEEEEeC--Ccceeeeecc
Q 008820 401 DGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTA---------------VQHTLVVSHESGSIKVWRN--DKFMKSMQTH 463 (552)
Q Consensus 401 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~---------------~~~~l~~g~~dg~i~iwd~--~~~~~~~~~h 463 (552)
|.++++|-+.++++...++.|.. .+ -+++|.| .+.++.+++.|++|++||+ +.++.++.+|
T Consensus 256 dqtl~vW~~~t~~~k~~lR~hEh-~v-Eci~wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk~wdv~tg~cL~tL~gh 333 (406)
T KOG0295|consen 256 DQTLRVWVVATKQCKAELREHEH-PV-ECIAWAPESSYPSISEATGSTNGGQVLGSGSRDKTIKIWDVSTGMCLFTLVGH 333 (406)
T ss_pred CceEEEEEeccchhhhhhhcccc-ce-EEEEecccccCcchhhccCCCCCccEEEeecccceEEEEeccCCeEEEEEecc
Confidence 99999999999987777776532 22 2244433 1358999999999999995 5688899999
Q ss_pred cceEEEEEe--cCCEEEEEeCCCeEEEEecCCCeeeeeeccCCCcccCcceEEEEEeCC--eEEEEeCCCeEEEEEe
Q 008820 464 KGSVFAVFL--EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQG--KLFVGCADRTVKIALC 536 (552)
Q Consensus 464 ~~~v~~v~~--~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~--~l~s~s~Dg~v~iw~~ 536 (552)
.+.|..+++ .|+||+++.+|+++++||+++.++......+ ...|++++|+.+ ++++|+-|.++++|..
T Consensus 334 dnwVr~~af~p~Gkyi~ScaDDktlrvwdl~~~~cmk~~~ah-----~hfvt~lDfh~~~p~VvTGsVdqt~KvwEc 405 (406)
T KOG0295|consen 334 DNWVRGVAFSPGGKYILSCADDKTLRVWDLKNLQCMKTLEAH-----EHFVTSLDFHKTAPYVVTGSVDQTVKVWEC 405 (406)
T ss_pred cceeeeeEEcCCCeEEEEEecCCcEEEEEeccceeeeccCCC-----cceeEEEecCCCCceEEeccccceeeeeec
Confidence 999999988 5999999999999999999999888776643 567999999953 5999999999999974
No 15
>KOG0284 consensus Polyadenylation factor I complex, subunit PFS2 [RNA processing and modification]
Probab=100.00 E-value=2.9e-34 Score=260.95 Aligned_cols=283 Identities=23% Similarity=0.283 Sum_probs=235.0
Q ss_pred CccceEEEEEc--CCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCC
Q 008820 251 HRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGH 328 (552)
Q Consensus 251 H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~ 328 (552)
-+.+|..+.|. |+.|++|+..|.+.+|+..+......++.|..+|.++.|++++. .+++|+.+|.|++|+....
T Consensus 95 vkc~V~~v~WtPeGRRLltgs~SGEFtLWNg~~fnFEtilQaHDs~Vr~m~ws~~g~-wmiSgD~gG~iKyWqpnmn--- 170 (464)
T KOG0284|consen 95 VKCPVNVVRWTPEGRRLLTGSQSGEFTLWNGTSFNFETILQAHDSPVRTMKWSHNGT-WMISGDKGGMIKYWQPNMN--- 170 (464)
T ss_pred cccceeeEEEcCCCceeEeecccccEEEecCceeeHHHHhhhhcccceeEEEccCCC-EEEEcCCCceEEecccchh---
Confidence 34689999999 89999999999999999866555555678999999999999665 7799999999999987632
Q ss_pred ccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe--CCEEEEEeCCCcEEE
Q 008820 329 EPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC--NGVLYSGSRDGTIRL 406 (552)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~i 406 (552)
.++....++...+ ...+|+|+...|++++.||+|+|||....+....+.+|.-.|.|++|+ .+++++||.|..|++
T Consensus 171 -nVk~~~ahh~eaI-RdlafSpnDskF~t~SdDg~ikiWdf~~~kee~vL~GHgwdVksvdWHP~kgLiasgskDnlVKl 248 (464)
T KOG0284|consen 171 -NVKIIQAHHAEAI-RDLAFSPNDSKFLTCSDDGTIKIWDFRMPKEERVLRGHGWDVKSVDWHPTKGLIASGSKDNLVKL 248 (464)
T ss_pred -hhHHhhHhhhhhh-heeccCCCCceeEEecCCCeEEEEeccCCchhheeccCCCCcceeccCCccceeEEccCCceeEe
Confidence 2333333332222 245788888899999999999999999999988999999999999999 459999999999999
Q ss_pred EECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEECCCcEEEEeCC--cceeeeecccceEEEEEe---cCCEEEEEe
Q 008820 407 WSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRND--KFMKSMQTHKGSVFAVFL---EGKWLFTGG 481 (552)
Q Consensus 407 wd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~--~~~~~~~~h~~~v~~v~~---~~~~l~sgs 481 (552)
||.+++.++.++..|. ..+.. +.|++++++|++++.|..++++|++ +.+..+++|+..++++.| ....|.+|+
T Consensus 249 WDprSg~cl~tlh~HK-ntVl~-~~f~~n~N~Llt~skD~~~kv~DiR~mkEl~~~r~Hkkdv~~~~WhP~~~~lftsgg 326 (464)
T KOG0284|consen 249 WDPRSGSCLATLHGHK-NTVLA-VKFNPNGNWLLTGSKDQSCKVFDIRTMKELFTYRGHKKDVTSLTWHPLNESLFTSGG 326 (464)
T ss_pred ecCCCcchhhhhhhcc-ceEEE-EEEcCCCCeeEEccCCceEEEEehhHhHHHHHhhcchhhheeeccccccccceeecc
Confidence 9999999999998774 34444 6999999999999999999999988 467788999999999976 889999999
Q ss_pred CCCeEEEEecCCCeeeeeeccCCCcccCcceEEEEEeC-Ce-EEEEeCCCeEEEEEecCCcceeEE
Q 008820 482 WDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQ-GK-LFVGCADRTVKIALCNRQIPEIFS 545 (552)
Q Consensus 482 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~~-~~-l~s~s~Dg~v~iw~~~~~~~~~~~ 545 (552)
.||.|..|.+...+...... ..+...|.+++|+| +. |++|+.|.++++|.-++++.....
T Consensus 327 ~Dgsvvh~~v~~~~p~~~i~----~AHd~~iwsl~~hPlGhil~tgsnd~t~rfw~r~rp~d~~~~ 388 (464)
T KOG0284|consen 327 SDGSVVHWVVGLEEPLGEIP----PAHDGEIWSLAYHPLGHILATGSNDRTVRFWTRNRPGDKNAD 388 (464)
T ss_pred CCCceEEEeccccccccCCC----cccccceeeeeccccceeEeecCCCcceeeeccCCCCCcccc
Confidence 99999999998443333222 23478899999997 44 889999999999998876655443
No 16
>KOG0273 consensus Beta-transducin family (WD-40 repeat) protein [Chromatin structure and dynamics]
Probab=100.00 E-value=1.2e-32 Score=254.85 Aligned_cols=299 Identities=18% Similarity=0.247 Sum_probs=244.3
Q ss_pred ccceeeecCcc-eEEEeeCCCeEEEEEeec-------------------C----ccceEEEEEc--CCEEEEEeCCCcEE
Q 008820 222 IDQARAAGGVK-DLVNGLSKGNVKFKDLQG-------------------H----RDCVTGLAVG--GGFLFSSSFDKSIH 275 (552)
Q Consensus 222 ~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~-------------------H----~~~V~~l~~s--~~~l~s~s~dg~I~ 275 (552)
+......+... .++++..+...++|++.. + ...|++++|+ |..||+|+.||.++
T Consensus 181 V~~~~WnP~~~~llasg~~~s~ari~~l~e~~~~~~~q~~lrh~~~~~~~s~~~nkdVT~L~Wn~~G~~LatG~~~G~~r 260 (524)
T KOG0273|consen 181 VFICAWNPLRDGLLASGSGDSTARIWNLLENSNIGSTQLVLRHCIREGGKSVPSNKDVTSLDWNNDGTLLATGSEDGEAR 260 (524)
T ss_pred eEEEecCchhhhhhhccCCccceeeeeehhhccccchhhhhhhhhhhhcccCCccCCcceEEecCCCCeEEEeecCcEEE
Confidence 34444444444 566677777777777653 2 2579999999 99999999999999
Q ss_pred EEeCCCCeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCccccccccCCCceeeeEEEEeeC-CCE
Q 008820 276 VWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTS-GRY 354 (552)
Q Consensus 276 iwd~~~~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 354 (552)
||+. +|..+.++..|.++|.++.|+..+. ++++++.|+++.+||..++.....+..... +...+.+. ...
T Consensus 261 iw~~-~G~l~~tl~~HkgPI~slKWnk~G~-yilS~~vD~ttilwd~~~g~~~q~f~~~s~-------~~lDVdW~~~~~ 331 (524)
T KOG0273|consen 261 IWNK-DGNLISTLGQHKGPIFSLKWNKKGT-YILSGGVDGTTILWDAHTGTVKQQFEFHSA-------PALDVDWQSNDE 331 (524)
T ss_pred EEec-CchhhhhhhccCCceEEEEEcCCCC-EEEeccCCccEEEEeccCceEEEeeeeccC-------CccceEEecCce
Confidence 9994 6788899999999999999988655 789999999999999976654433332221 11233343 348
Q ss_pred EEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe--CCEEEEEeCCCcEEEEECCCCceeEEEecCCCCceEEEEEE
Q 008820 355 LYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC--NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSL 432 (552)
Q Consensus 355 l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 432 (552)
+++++.|+.|+++.+....++.++.+|.++|.++.|+ +.+|++++.|++++||+.......+.+..|.+. +.+ +.|
T Consensus 332 F~ts~td~~i~V~kv~~~~P~~t~~GH~g~V~alk~n~tg~LLaS~SdD~TlkiWs~~~~~~~~~l~~Hske-i~t-~~w 409 (524)
T KOG0273|consen 332 FATSSTDGCIHVCKVGEDRPVKTFIGHHGEVNALKWNPTGSLLASCSDDGTLKIWSMGQSNSVHDLQAHSKE-IYT-IKW 409 (524)
T ss_pred EeecCCCceEEEEEecCCCcceeeecccCceEEEEECCCCceEEEecCCCeeEeeecCCCcchhhhhhhccc-eee-Eee
Confidence 9999999999999999999999999999999999999 559999999999999999988888888877543 344 477
Q ss_pred cCCC---------CEEEEEECCCcEEEEeC--CcceeeeecccceEEEEEe--cCCEEEEEeCCCeEEEEecCCCeeeee
Q 008820 433 TAVQ---------HTLVVSHESGSIKVWRN--DKFMKSMQTHKGSVFAVFL--EGKWLFTGGWDKTVSVQELAGDEFEED 499 (552)
Q Consensus 433 s~~~---------~~l~~g~~dg~i~iwd~--~~~~~~~~~h~~~v~~v~~--~~~~l~sgs~dg~i~iwd~~~~~~~~~ 499 (552)
+|.| ..+++++.|++|++||. +.++..+..|..+|++++| +|+++++|+.||.|.+|+..++++...
T Consensus 410 sp~g~v~~n~~~~~~l~sas~dstV~lwdv~~gv~i~~f~kH~~pVysvafS~~g~ylAsGs~dg~V~iws~~~~~l~~s 489 (524)
T KOG0273|consen 410 SPTGPVTSNPNMNLMLASASFDSTVKLWDVESGVPIHTLMKHQEPVYSVAFSPNGRYLASGSLDGCVHIWSTKTGKLVKS 489 (524)
T ss_pred cCCCCccCCCcCCceEEEeecCCeEEEEEccCCceeEeeccCCCceEEEEecCCCcEEEecCCCCeeEeccccchheeEe
Confidence 7754 57899999999999995 4678899999999999988 799999999999999999999988776
Q ss_pred eccCCCcccCcceEEEEEe--CCeEEEEeCCCeEEEEEec
Q 008820 500 VIPTGAIPCGSVITALLYW--QGKLFVGCADRTVKIALCN 537 (552)
Q Consensus 500 ~~~~~~~~~~~~v~~l~~~--~~~l~s~s~Dg~v~iw~~~ 537 (552)
... ...|..++|+ ++++..+-.||.+++-|+.
T Consensus 490 ~~~------~~~Ifel~Wn~~G~kl~~~~sd~~vcvldlr 523 (524)
T KOG0273|consen 490 YQG------TGGIFELCWNAAGDKLGACASDGSVCVLDLR 523 (524)
T ss_pred ecC------CCeEEEEEEcCCCCEEEEEecCCCceEEEec
Confidence 554 5559999999 5678888899999999875
No 17
>KOG0645 consensus WD40 repeat protein [General function prediction only]
Probab=100.00 E-value=8.8e-32 Score=232.54 Aligned_cols=288 Identities=20% Similarity=0.302 Sum_probs=228.6
Q ss_pred eEEEEEeecCccceEEEEEc-C--CEEEEEeCCCcEEEEeCCC---CeEEEEE-eCCCCCeEEEEEecCCCCEEEEEcCC
Q 008820 242 NVKFKDLQGHRDCVTGLAVG-G--GFLFSSSFDKSIHVWSLKD---FSHVHTF-KGHDHKVMAVVYVDEDQPLCISGDSG 314 (552)
Q Consensus 242 ~~~~~~l~~H~~~V~~l~~s-~--~~l~s~s~dg~I~iwd~~~---~~~~~~~-~~h~~~v~~v~~~~~~~~~l~s~~~d 314 (552)
-+.+..+++|.+.|..++|+ + ..||||+.|+.||+|+... ..+...+ .+|+..|.+++|+|.++ +|+++|.|
T Consensus 4 l~~~~~~~gh~~r~W~~awhp~~g~ilAscg~Dk~vriw~~~~~~s~~ck~vld~~hkrsVRsvAwsp~g~-~La~aSFD 82 (312)
T KOG0645|consen 4 LILEQKLSGHKDRVWSVAWHPGKGVILASCGTDKAVRIWSTSSGDSWTCKTVLDDGHKRSVRSVAWSPHGR-YLASASFD 82 (312)
T ss_pred ceeEEeecCCCCcEEEEEeccCCceEEEeecCCceEEEEecCCCCcEEEEEeccccchheeeeeeecCCCc-EEEEeecc
Confidence 34577899999999999999 4 4899999999999999885 3444444 36999999999999776 88999999
Q ss_pred CcEEEEeCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCC---ceeEEecCCCCCeEEEEEe
Q 008820 315 GGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDG---TLSCTMSGHKSAVSTLAVC 391 (552)
Q Consensus 315 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~---~~~~~~~~h~~~v~~l~~~ 391 (552)
.++.||.-..+ .-..+..+.+|.+. ....+++.+|++|++++.|++|-+|.+..+ ++...++.|...|..+.|+
T Consensus 83 ~t~~Iw~k~~~-efecv~~lEGHEnE--VK~Vaws~sG~~LATCSRDKSVWiWe~deddEfec~aVL~~HtqDVK~V~WH 159 (312)
T KOG0645|consen 83 ATVVIWKKEDG-EFECVATLEGHENE--VKCVAWSASGNYLATCSRDKSVWIWEIDEDDEFECIAVLQEHTQDVKHVIWH 159 (312)
T ss_pred ceEEEeecCCC-ceeEEeeeeccccc--eeEEEEcCCCCEEEEeeCCCeEEEEEecCCCcEEEEeeeccccccccEEEEc
Confidence 99999975532 23345555555542 234588899999999999999999998743 5778899999999999999
Q ss_pred C--CEEEEEeCCCcEEEEECCC---CceeEEEecCCCCceEEEEEEcCCCCEEEEEECCCcEEEEeCCcceeeeecccce
Q 008820 392 N--GVLYSGSRDGTIRLWSLSD---HSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDKFMKSMQTHKGS 466 (552)
Q Consensus 392 ~--~~l~s~~~dg~i~iwd~~~---~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~~~~~~~~~h~~~ 466 (552)
+ ++|+++|.|++|++|+-.. -.+++++..++. .+.+ ++|++.|..|++++.|++++||..... .-..|+..
T Consensus 160 Pt~dlL~S~SYDnTIk~~~~~~dddW~c~~tl~g~~~-TVW~-~~F~~~G~rl~s~sdD~tv~Iw~~~~~--~~~~~sr~ 235 (312)
T KOG0645|consen 160 PTEDLLFSCSYDNTIKVYRDEDDDDWECVQTLDGHEN-TVWS-LAFDNIGSRLVSCSDDGTVSIWRLYTD--LSGMHSRA 235 (312)
T ss_pred CCcceeEEeccCCeEEEEeecCCCCeeEEEEecCccc-eEEE-EEecCCCceEEEecCCcceEeeeeccC--cchhcccc
Confidence 5 6999999999999998763 347888887743 4555 699999999999999999999985421 12347889
Q ss_pred EEEEEecCCEEEEEeCCCeEEEEecCCCeeee--eeccCCCcccCcceEEEEEeC---CeEEEEeCCCeEEEEEec
Q 008820 467 VFAVFLEGKWLFTGGWDKTVSVQELAGDEFEE--DVIPTGAIPCGSVITALLYWQ---GKLFVGCADRTVKIALCN 537 (552)
Q Consensus 467 v~~v~~~~~~l~sgs~dg~i~iwd~~~~~~~~--~~~~~~~~~~~~~v~~l~~~~---~~l~s~s~Dg~v~iw~~~ 537 (552)
++.+.|+...|++++.|+.|++|.-....... .........|...|+++.|.| ++|++|+.||.|++|.+.
T Consensus 236 ~Y~v~W~~~~IaS~ggD~~i~lf~~s~~~d~p~~~l~~~~~~aHe~dVNsV~w~p~~~~~L~s~~DDG~v~~W~l~ 311 (312)
T KOG0645|consen 236 LYDVPWDNGVIASGGGDDAIRLFKESDSPDEPSWNLLAKKEGAHEVDVNSVQWNPKVSNRLASGGDDGIVNFWELE 311 (312)
T ss_pred eEeeeecccceEeccCCCEEEEEEecCCCCCchHHHHHhhhcccccccceEEEcCCCCCceeecCCCceEEEEEec
Confidence 99999998899999999999999776431111 111112223466899999997 569999999999999975
No 18
>KOG0316 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=100.00 E-value=1.7e-32 Score=232.02 Aligned_cols=281 Identities=16% Similarity=0.252 Sum_probs=232.4
Q ss_pred CeEEEEEeecCccceEEEEEc--CCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEE
Q 008820 241 GNVKFKDLQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIF 318 (552)
Q Consensus 241 ~~~~~~~l~~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~ 318 (552)
+++++..+..|+++|+++.|+ |++.++++.|.+|++|+...+.+++++.+|...|..++.+.++. -+++|+.|..+.
T Consensus 6 ptkr~~~l~~~qgaV~avryN~dGnY~ltcGsdrtvrLWNp~rg~liktYsghG~EVlD~~~s~Dns-kf~s~GgDk~v~ 84 (307)
T KOG0316|consen 6 PTKRLSILDCAQGAVRAVRYNVDGNYCLTCGSDRTVRLWNPLRGALIKTYSGHGHEVLDAALSSDNS-KFASCGGDKAVQ 84 (307)
T ss_pred cchhceeecccccceEEEEEccCCCEEEEcCCCceEEeecccccceeeeecCCCceeeecccccccc-ccccCCCCceEE
Confidence 455678899999999999999 99999999999999999999999999999999999999887655 569999999999
Q ss_pred EEeCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCC--CceeEEecCCCCCeEEEEEeCCEEE
Q 008820 319 VWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLD--GTLSCTMSGHKSAVSTLAVCNGVLY 396 (552)
Q Consensus 319 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~--~~~~~~~~~h~~~v~~l~~~~~~l~ 396 (552)
+||+++++....++.+.... ....|+.+...+++|+.|.++++||.++ .++++.+......|.++...+..++
T Consensus 85 vwDV~TGkv~Rr~rgH~aqV-----NtV~fNeesSVv~SgsfD~s~r~wDCRS~s~ePiQildea~D~V~Si~v~~heIv 159 (307)
T KOG0316|consen 85 VWDVNTGKVDRRFRGHLAQV-----NTVRFNEESSVVASGSFDSSVRLWDCRSRSFEPIQILDEAKDGVSSIDVAEHEIV 159 (307)
T ss_pred EEEcccCeeeeeccccccee-----eEEEecCcceEEEeccccceeEEEEcccCCCCccchhhhhcCceeEEEecccEEE
Confidence 99999987666555433221 2235556667999999999999999975 4788889888899999999999999
Q ss_pred EEeCCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEECCCcEEEEe--CCcceeeeecccceEEEEE--e
Q 008820 397 SGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWR--NDKFMKSMQTHKGSVFAVF--L 472 (552)
Q Consensus 397 s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd--~~~~~~~~~~h~~~v~~v~--~ 472 (552)
+|+.||++|.||++.|+....+.++ ++.+ ++|+++++..++++-|+++++.| .++.++.+++|.+.-..+. +
T Consensus 160 aGS~DGtvRtydiR~G~l~sDy~g~---pit~-vs~s~d~nc~La~~l~stlrLlDk~tGklL~sYkGhkn~eykldc~l 235 (307)
T KOG0316|consen 160 AGSVDGTVRTYDIRKGTLSSDYFGH---PITS-VSFSKDGNCSLASSLDSTLRLLDKETGKLLKSYKGHKNMEYKLDCCL 235 (307)
T ss_pred eeccCCcEEEEEeecceeehhhcCC---ccee-EEecCCCCEEEEeeccceeeecccchhHHHHHhcccccceeeeeeee
Confidence 9999999999999999887766543 3444 69999999999999999999998 6688999999988665543 2
Q ss_pred --cCCEEEEEeCCCeEEEEecCCCeeeeeeccCCCcccCcceEEEEEeCCe--EEEEeCCCeEEEEEe
Q 008820 473 --EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQGK--LFVGCADRTVKIALC 536 (552)
Q Consensus 473 --~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~--l~s~s~Dg~v~iw~~ 536 (552)
....+++||+||.|++||+.+......+.... ...|.+++++|.. ++++... .+..|.-
T Consensus 236 ~qsdthV~sgSEDG~Vy~wdLvd~~~~sk~~~~~----~v~v~dl~~hp~~~~f~~A~~~-~~~~~~~ 298 (307)
T KOG0316|consen 236 NQSDTHVFSGSEDGKVYFWDLVDETQISKLSVVS----TVIVTDLSCHPTMDDFITATGH-GDLFWYQ 298 (307)
T ss_pred cccceeEEeccCCceEEEEEeccceeeeeeccCC----ceeEEeeecccCccceeEecCC-ceeceee
Confidence 67799999999999999999887766655432 3348899999854 6666544 4555643
No 19
>KOG0282 consensus mRNA splicing factor [Function unknown]
Probab=100.00 E-value=3.7e-34 Score=265.91 Aligned_cols=281 Identities=16% Similarity=0.230 Sum_probs=236.3
Q ss_pred eEEEEEeecCccceEEEEEc---CCEEEEEeCCCcEEEEeCCC-CeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcE
Q 008820 242 NVKFKDLQGHRDCVTGLAVG---GGFLFSSSFDKSIHVWSLKD-FSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGI 317 (552)
Q Consensus 242 ~~~~~~l~~H~~~V~~l~~s---~~~l~s~s~dg~I~iwd~~~-~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i 317 (552)
...++++.||...|+++.|. +.+|++++.|+.|+||++-. +++++++.+|..+|.+++|++++. .+++++.|+.+
T Consensus 204 kk~~~~~~gH~kgvsai~~fp~~~hLlLS~gmD~~vklW~vy~~~~~lrtf~gH~k~Vrd~~~s~~g~-~fLS~sfD~~l 282 (503)
T KOG0282|consen 204 KKLSHNLSGHTKGVSAIQWFPKKGHLLLSGGMDGLVKLWNVYDDRRCLRTFKGHRKPVRDASFNNCGT-SFLSASFDRFL 282 (503)
T ss_pred HhheeeccCCccccchhhhccceeeEEEecCCCceEEEEEEecCcceehhhhcchhhhhhhhccccCC-eeeeeecceee
Confidence 34567899999999999998 89999999999999999865 899999999999999999998766 56899999999
Q ss_pred EEEeCCCCCCCccccccccCCCceeeeEEEEeeCC-CEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe--CCE
Q 008820 318 FVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSG-RYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC--NGV 394 (552)
Q Consensus 318 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~ 394 (552)
++||++++.....+..- ....+..+.|++ +.+++|+.|+.|+.||+++++.++.+..|-+.|..+.|- +..
T Consensus 283 KlwDtETG~~~~~f~~~------~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiRs~kvvqeYd~hLg~i~~i~F~~~g~r 356 (503)
T KOG0282|consen 283 KLWDTETGQVLSRFHLD------KVPTCVKFHPDNQNIFLVGGSDKKIRQWDIRSGKVVQEYDRHLGAILDITFVDEGRR 356 (503)
T ss_pred eeeccccceEEEEEecC------CCceeeecCCCCCcEEEEecCCCcEEEEeccchHHHHHHHhhhhheeeeEEccCCce
Confidence 99999998765544432 223456788887 699999999999999999999999999999999999998 349
Q ss_pred EEEEeCCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEECCCcEEEEeCC-----cceeeeecccceEEE
Q 008820 395 LYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRND-----KFMKSMQTHKGSVFA 469 (552)
Q Consensus 395 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~-----~~~~~~~~h~~~v~~ 469 (552)
+++.+.|++++||+.+.+-.+..+.....-... ++..+|++.++++-+.|+.|.++.+. +..+.+++|..+=.+
T Consensus 357 FissSDdks~riWe~~~~v~ik~i~~~~~hsmP-~~~~~P~~~~~~aQs~dN~i~ifs~~~~~r~nkkK~feGh~vaGys 435 (503)
T KOG0282|consen 357 FISSSDDKSVRIWENRIPVPIKNIADPEMHTMP-CLTLHPNGKWFAAQSMDNYIAIFSTVPPFRLNKKKRFEGHSVAGYS 435 (503)
T ss_pred EeeeccCccEEEEEcCCCccchhhcchhhccCc-ceecCCCCCeehhhccCceEEEEecccccccCHhhhhcceeccCce
Confidence 999999999999999988776655444322233 36899999999999999999999854 345677888654333
Q ss_pred ----EEecCCEEEEEeCCCeEEEEecCCCeeeeeeccCCCcccCcceEEEEEeC---CeEEEEeCCCeEEEEE
Q 008820 470 ----VFLEGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQ---GKLFVGCADRTVKIAL 535 (552)
Q Consensus 470 ----v~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~~---~~l~s~s~Dg~v~iw~ 535 (552)
+++||.+|++|+.||.+.+||.++.++...+..+ ..+|..+.|+| ..+++++.||.|++|+
T Consensus 436 ~~v~fSpDG~~l~SGdsdG~v~~wdwkt~kl~~~lkah-----~~~ci~v~wHP~e~Skvat~~w~G~Ikiwd 503 (503)
T KOG0282|consen 436 CQVDFSPDGRTLCSGDSDGKVNFWDWKTTKLVSKLKAH-----DQPCIGVDWHPVEPSKVATCGWDGLIKIWD 503 (503)
T ss_pred eeEEEcCCCCeEEeecCCccEEEeechhhhhhhccccC-----CcceEEEEecCCCcceeEecccCceeEecC
Confidence 3459999999999999999999988776665553 67899999996 4699999999999996
No 20
>KOG0279 consensus G protein beta subunit-like protein [Signal transduction mechanisms]
Probab=100.00 E-value=9e-32 Score=233.48 Aligned_cols=253 Identities=21% Similarity=0.315 Sum_probs=207.6
Q ss_pred eEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCC--CCccccccccCCCceeeeEEEEeeCCCEEEEeeC
Q 008820 283 SHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPL--GHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSG 360 (552)
Q Consensus 283 ~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~ 360 (552)
....++++|++.|+.++..+.+..++++++.|.++.+|++.... ...+.+.+.+|. +...-..++++|++.++++.
T Consensus 6 ~l~~tl~gh~d~Vt~la~~~~~~~~l~sasrDk~ii~W~L~~dd~~~G~~~r~~~GHs--H~v~dv~~s~dg~~alS~sw 83 (315)
T KOG0279|consen 6 VLRGTLEGHTDWVTALAIKIKNSDILVSASRDKTIIVWKLTSDDIKYGVPVRRLTGHS--HFVSDVVLSSDGNFALSASW 83 (315)
T ss_pred eeeeeecCCCceEEEEEeecCCCceEEEcccceEEEEEEeccCccccCceeeeeeccc--eEecceEEccCCceEEeccc
Confidence 44567899999999999999888999999999999999997653 233455666644 33344578899999999999
Q ss_pred CCcEEEEECCCCceeEEecCCCCCeEEEEEe-CC-EEEEEeCCCcEEEEECCCCceeEEEecCC-CCceEEEEEEcCC--
Q 008820 361 DRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC-NG-VLYSGSRDGTIRLWSLSDHSLLTVLEEDS-SGAVSSVLSLTAV-- 435 (552)
Q Consensus 361 dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~-~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~~~~~~~~~~s~~-- 435 (552)
|+++++||+.+++..+.|.+|...|.+++|+ ++ .+++|+.|.+|++||... .+..++.... .+.+.+ +.|+|+
T Consensus 84 D~~lrlWDl~~g~~t~~f~GH~~dVlsva~s~dn~qivSGSrDkTiklwnt~g-~ck~t~~~~~~~~WVsc-vrfsP~~~ 161 (315)
T KOG0279|consen 84 DGTLRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSGSRDKTIKLWNTLG-VCKYTIHEDSHREWVSC-VRFSPNES 161 (315)
T ss_pred cceEEEEEecCCcEEEEEEecCCceEEEEecCCCceeecCCCcceeeeeeecc-cEEEEEecCCCcCcEEE-EEEcCCCC
Confidence 9999999999999999999999999999999 44 999999999999999864 4555555443 445554 799998
Q ss_pred CCEEEEEECCCcEEEEeCCc--ceeeeecccceEEEEE--ecCCEEEEEeCCCeEEEEecCCCeeeeeeccCCCcccCcc
Q 008820 436 QHTLVVSHESGSIKVWRNDK--FMKSMQTHKGSVFAVF--LEGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSV 511 (552)
Q Consensus 436 ~~~l~~g~~dg~i~iwd~~~--~~~~~~~h~~~v~~v~--~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 511 (552)
..+|++++.|++|++||+++ ....+.+|.+.++.+. +||..+++|+.||.+.+||++.++....+.+ ...
T Consensus 162 ~p~Ivs~s~DktvKvWnl~~~~l~~~~~gh~~~v~t~~vSpDGslcasGgkdg~~~LwdL~~~k~lysl~a------~~~ 235 (315)
T KOG0279|consen 162 NPIIVSASWDKTVKVWNLRNCQLRTTFIGHSGYVNTVTVSPDGSLCASGGKDGEAMLWDLNEGKNLYSLEA------FDI 235 (315)
T ss_pred CcEEEEccCCceEEEEccCCcchhhccccccccEEEEEECCCCCEEecCCCCceEEEEEccCCceeEeccC------CCe
Confidence 67999999999999999875 4667889999998776 4999999999999999999998877665544 667
Q ss_pred eEEEEEeCCe-EEEEeCCCeEEEEEecCCcceeEEE
Q 008820 512 ITALLYWQGK-LFVGCADRTVKIALCNRQIPEIFSL 546 (552)
Q Consensus 512 v~~l~~~~~~-l~s~s~Dg~v~iw~~~~~~~~~~~~ 546 (552)
|.+++|+|++ .+++..+..|+|||++ +...++++
T Consensus 236 v~sl~fspnrywL~~at~~sIkIwdl~-~~~~v~~l 270 (315)
T KOG0279|consen 236 VNSLCFSPNRYWLCAATATSIKIWDLE-SKAVVEEL 270 (315)
T ss_pred EeeEEecCCceeEeeccCCceEEEecc-chhhhhhc
Confidence 9999999987 4456667779999998 34344433
No 21
>KOG0265 consensus U5 snRNP-specific protein-like factor and related proteins [RNA processing and modification]
Probab=100.00 E-value=6.5e-32 Score=236.65 Aligned_cols=278 Identities=19% Similarity=0.288 Sum_probs=228.6
Q ss_pred eEEEEEeecCccceEEEEEc--CCEEEEEeCCCcEEEEeC-CCCeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEE
Q 008820 242 NVKFKDLQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSL-KDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIF 318 (552)
Q Consensus 242 ~~~~~~l~~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~-~~~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~ 318 (552)
...+..+.||++.|..+.|+ |.+|+||+.|..|.+|++ ...+....+++|.++|..+.|.+++. .+++++.|.+++
T Consensus 37 ~ap~m~l~gh~geI~~~~F~P~gs~~aSgG~Dr~I~LWnv~gdceN~~~lkgHsgAVM~l~~~~d~s-~i~S~gtDk~v~ 115 (338)
T KOG0265|consen 37 QAPIMLLPGHKGEIYTIKFHPDGSCFASGGSDRAIVLWNVYGDCENFWVLKGHSGAVMELHGMRDGS-HILSCGTDKTVR 115 (338)
T ss_pred cchhhhcCCCcceEEEEEECCCCCeEeecCCcceEEEEeccccccceeeeccccceeEeeeeccCCC-EEEEecCCceEE
Confidence 34566789999999999999 999999999999999994 45567788999999999999998665 779999999999
Q ss_pred EEeCCCCCCCccccccccCCCceeeeEEEEeeC---CCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe--CC
Q 008820 319 VWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTS---GRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC--NG 393 (552)
Q Consensus 319 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~ 393 (552)
.||+++++.....+... ..+.++.|. ...+.+|+.||++++||+++..+++++. .+.+++++.|. .+
T Consensus 116 ~wD~~tG~~~rk~k~h~-------~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~~~~t~~-~kyqltAv~f~d~s~ 187 (338)
T KOG0265|consen 116 GWDAETGKRIRKHKGHT-------SFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKEAIKTFE-NKYQLTAVGFKDTSD 187 (338)
T ss_pred EEecccceeeehhcccc-------ceeeecCccccCCeEEEecCCCceEEEEeecccchhhccc-cceeEEEEEeccccc
Confidence 99999887665554422 223344443 3388999999999999999999988876 46679999999 44
Q ss_pred EEEEEeCCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEECCCcEEEEeCC------cceeeeecccc--
Q 008820 394 VLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRND------KFMKSMQTHKG-- 465 (552)
Q Consensus 394 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~------~~~~~~~~h~~-- 465 (552)
.+.+|+-|+.|++||++.+...+++.++. ..++. ++.+++|.++.+-+-|.++++||.+ .++..+.+|.-
T Consensus 188 qv~sggIdn~ikvWd~r~~d~~~~lsGh~-DtIt~-lsls~~gs~llsnsMd~tvrvwd~rp~~p~~R~v~if~g~~hnf 265 (338)
T KOG0265|consen 188 QVISGGIDNDIKVWDLRKNDGLYTLSGHA-DTITG-LSLSRYGSFLLSNSMDNTVRVWDVRPFAPSQRCVKIFQGHIHNF 265 (338)
T ss_pred ceeeccccCceeeeccccCcceEEeeccc-Cceee-EEeccCCCccccccccceEEEEEecccCCCCceEEEeecchhhh
Confidence 99999999999999999999999999884 55555 6999999999999999999999965 34677776543
Q ss_pred eE--EEE--EecCCEEEEEeCCCeEEEEecCCCeeeeeeccCCCcccCcceEEEEEeCC--eEEEEeCCCeEEEEE
Q 008820 466 SV--FAV--FLEGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQG--KLFVGCADRTVKIAL 535 (552)
Q Consensus 466 ~v--~~v--~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~--~l~s~s~Dg~v~iw~ 535 (552)
.. ..+ ++++..+.+|+.|..+++||.....+...+..+ ...|++++|+|. .|.+++.|.+|++=.
T Consensus 266 eknlL~cswsp~~~~i~ags~dr~vyvwd~~~r~~lyklpGh-----~gsvn~~~Fhp~e~iils~~sdk~i~lge 336 (338)
T KOG0265|consen 266 EKNLLKCSWSPNGTKITAGSADRFVYVWDTTSRRILYKLPGH-----YGSVNEVDFHPTEPIILSCSSDKTIYLGE 336 (338)
T ss_pred hhhcceeeccCCCCccccccccceEEEeecccccEEEEcCCc-----ceeEEEeeecCCCcEEEEeccCceeEeec
Confidence 22 233 349999999999999999999887666554443 677999999975 489999999998743
No 22
>KOG0291 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=100.00 E-value=9.2e-31 Score=255.16 Aligned_cols=312 Identities=20% Similarity=0.296 Sum_probs=257.0
Q ss_pred CCCCccccceeeecCcceEEEeeCCCeEEEEEee------------------------c-------------------Cc
Q 008820 216 NSDGADIDQARAAGGVKDLVNGLSKGNVKFKDLQ------------------------G-------------------HR 252 (552)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~------------------------~-------------------H~ 252 (552)
+.+...+....+..+...+++-..+|.+.+|++. + ..
T Consensus 186 ~gHkd~VvacfF~~~~~~l~tvskdG~l~~W~~~~~P~~~~~~~kd~eg~~d~~~~~~~Eek~~~~~~~k~~k~~ln~~~ 265 (893)
T KOG0291|consen 186 NGHKDYVVACFFGANSLDLYTVSKDGALFVWTCDLRPPELDKAEKDEEGSDDEEMDEDGEEKTHKIFWYKTKKHYLNQNS 265 (893)
T ss_pred cCCCcceEEEEeccCcceEEEEecCceEEEEEecCCCcccccccccccccccccccccchhhhcceEEEEEEeeeecccc
Confidence 4444567777777888888888888888888765 1 12
Q ss_pred cceEEEEEc--CCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCcc
Q 008820 253 DCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEP 330 (552)
Q Consensus 253 ~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~ 330 (552)
..|++.+|+ .+.|++|-..|...+|++....+++.+.-...+|..++|+..|..+.+.|+.-|.+.||++.+....-.
T Consensus 266 ~kvtaa~fH~~t~~lvvgFssG~f~LyelP~f~lih~LSis~~~I~t~~~N~tGDWiA~g~~klgQLlVweWqsEsYVlK 345 (893)
T KOG0291|consen 266 SKVTAAAFHKGTNLLVVGFSSGEFGLYELPDFNLIHSLSISDQKILTVSFNSTGDWIAFGCSKLGQLLVWEWQSESYVLK 345 (893)
T ss_pred cceeeeeccCCceEEEEEecCCeeEEEecCCceEEEEeecccceeeEEEecccCCEEEEcCCccceEEEEEeeccceeee
Confidence 568889999 678999999999999999999999999988899999999988887766666779999999986543332
Q ss_pred ccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe--CCEEEEEeCCCcEEEEE
Q 008820 331 LKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC--NGVLYSGSRDGTIRLWS 408 (552)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd 408 (552)
.+.+ .......+.+|||+++++|+.||.|++||..++-|..+|..|++.|+.+.|+ ++.+++.|.||+|+.||
T Consensus 346 QQgH-----~~~i~~l~YSpDgq~iaTG~eDgKVKvWn~~SgfC~vTFteHts~Vt~v~f~~~g~~llssSLDGtVRAwD 420 (893)
T KOG0291|consen 346 QQGH-----SDRITSLAYSPDGQLIATGAEDGKVKVWNTQSGFCFVTFTEHTSGVTAVQFTARGNVLLSSSLDGTVRAWD 420 (893)
T ss_pred cccc-----ccceeeEEECCCCcEEEeccCCCcEEEEeccCceEEEEeccCCCceEEEEEEecCCEEEEeecCCeEEeee
Confidence 2221 1233456889999999999999999999999999999999999999999999 66999999999999999
Q ss_pred CCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEECCC-cEEEEe--CCcceeeeecccceEEEEEe--cCCEEEEEeCC
Q 008820 409 LSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESG-SIKVWR--NDKFMKSMQTHKGSVFAVFL--EGKWLFTGGWD 483 (552)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg-~i~iwd--~~~~~~~~~~h~~~v~~v~~--~~~~l~sgs~d 483 (552)
+...+..+++..+.+.... +++..|.|..+++|+.|. .|++|+ .++.+..+.||.++|.+++| ++..|+++|+|
T Consensus 421 lkRYrNfRTft~P~p~Qfs-cvavD~sGelV~AG~~d~F~IfvWS~qTGqllDiLsGHEgPVs~l~f~~~~~~LaS~SWD 499 (893)
T KOG0291|consen 421 LKRYRNFRTFTSPEPIQFS-CVAVDPSGELVCAGAQDSFEIFVWSVQTGQLLDILSGHEGPVSGLSFSPDGSLLASGSWD 499 (893)
T ss_pred ecccceeeeecCCCceeee-EEEEcCCCCEEEeeccceEEEEEEEeecCeeeehhcCCCCcceeeEEccccCeEEecccc
Confidence 9999999999987654444 479999999999998875 699998 56788999999999998665 89999999999
Q ss_pred CeEEEEecCCCeeeeeeccCCCcccCcceEEEEEeC--CeEEEEeCCCeEEEEEecC
Q 008820 484 KTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQ--GKLFVGCADRTVKIALCNR 538 (552)
Q Consensus 484 g~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~~--~~l~s~s~Dg~v~iw~~~~ 538 (552)
.+|++||+-+..-... .+.....+..++|+| ..+++++.||.|.+||.+.
T Consensus 500 kTVRiW~if~s~~~vE-----tl~i~sdvl~vsfrPdG~elaVaTldgqItf~d~~~ 551 (893)
T KOG0291|consen 500 KTVRIWDIFSSSGTVE-----TLEIRSDVLAVSFRPDGKELAVATLDGQITFFDIKE 551 (893)
T ss_pred ceEEEEEeeccCceee-----eEeeccceeEEEEcCCCCeEEEEEecceEEEEEhhh
Confidence 9999999965422211 122256689999995 3499999999999999983
No 23
>KOG0318 consensus WD40 repeat stress protein/actin interacting protein [Cytoskeleton]
Probab=100.00 E-value=1.3e-30 Score=244.53 Aligned_cols=309 Identities=18% Similarity=0.250 Sum_probs=242.1
Q ss_pred ceEEEeeCCCeEEEEE---------eecCccceEEEEEc--CCEEEEEeCCCcEEEEeCCCCeEEEEEe---CCCCCeEE
Q 008820 232 KDLVNGLSKGNVKFKD---------LQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFK---GHDHKVMA 297 (552)
Q Consensus 232 ~~~~~~~~~~~~~~~~---------l~~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~~~~~~~~---~h~~~v~~ 297 (552)
-+++++..|..+.+++ +..|..-|+|+.|+ |.+++|++.||+|.+||-.+++.+..+. +|.+.|.+
T Consensus 161 fRi~T~sdDn~v~ffeGPPFKFk~s~r~HskFV~~VRysPDG~~Fat~gsDgki~iyDGktge~vg~l~~~~aHkGsIfa 240 (603)
T KOG0318|consen 161 FRIATGSDDNTVAFFEGPPFKFKSSFREHSKFVNCVRYSPDGSRFATAGSDGKIYIYDGKTGEKVGELEDSDAHKGSIFA 240 (603)
T ss_pred eEEEeccCCCeEEEeeCCCeeeeecccccccceeeEEECCCCCeEEEecCCccEEEEcCCCccEEEEecCCCCccccEEE
Confidence 4455666666555443 67899999999999 9999999999999999999999999998 89999999
Q ss_pred EEEecCCCCEEEEEcCCCcEEEEeCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCceeEE
Q 008820 298 VVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCT 377 (552)
Q Consensus 298 v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~ 377 (552)
++|+|++. .+++++.|.+++|||+.+.+.. +++..........+ ..-+.+..|++.+.+|+|.+++.....+...
T Consensus 241 lsWsPDs~-~~~T~SaDkt~KIWdVs~~slv---~t~~~~~~v~dqqv-G~lWqkd~lItVSl~G~in~ln~~d~~~~~~ 315 (603)
T KOG0318|consen 241 LSWSPDST-QFLTVSADKTIKIWDVSTNSLV---STWPMGSTVEDQQV-GCLWQKDHLITVSLSGTINYLNPSDPSVLKV 315 (603)
T ss_pred EEECCCCc-eEEEecCCceEEEEEeeccceE---EEeecCCchhceEE-EEEEeCCeEEEEEcCcEEEEecccCCChhhe
Confidence 99999776 6699999999999999976433 33333222112222 3334477899999999999999999999999
Q ss_pred ecCCCCCeEEEEEe-C-CEEEEEeCCCcEEEEECCCCcee-----------EEEecCC----------------------
Q 008820 378 MSGHKSAVSTLAVC-N-GVLYSGSRDGTIRLWSLSDHSLL-----------TVLEEDS---------------------- 422 (552)
Q Consensus 378 ~~~h~~~v~~l~~~-~-~~l~s~~~dg~i~iwd~~~~~~~-----------~~~~~~~---------------------- 422 (552)
+.+|...|+++..+ + .+|++|+.||.|.-||..++..- ..+....
T Consensus 316 i~GHnK~ITaLtv~~d~~~i~SgsyDG~I~~W~~~~g~~~~~~g~~h~nqI~~~~~~~~~~~~t~g~Dd~l~~~~~~~~~ 395 (603)
T KOG0318|consen 316 ISGHNKSITALTVSPDGKTIYSGSYDGHINSWDSGSGTSDRLAGKGHTNQIKGMAASESGELFTIGWDDTLRVISLKDNG 395 (603)
T ss_pred ecccccceeEEEEcCCCCEEEeeccCceEEEEecCCccccccccccccceEEEEeecCCCcEEEEecCCeEEEEecccCc
Confidence 99999999999999 3 39999999999999998754321 1110000
Q ss_pred --------------------C--------------------------CceEEEEEEcCCCCEEEEEECCCcEEEEeCCc-
Q 008820 423 --------------------S--------------------------GAVSSVLSLTAVQHTLVVSHESGSIKVWRNDK- 455 (552)
Q Consensus 423 --------------------~--------------------------~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~~- 455 (552)
. +....+++++|++..+++|+.||.|++|.+..
T Consensus 396 ~t~~~~~~lg~QP~~lav~~d~~~avv~~~~~iv~l~~~~~~~~~~~~y~~s~vAv~~~~~~vaVGG~Dgkvhvysl~g~ 475 (603)
T KOG0318|consen 396 YTKSEVVKLGSQPKGLAVLSDGGTAVVACISDIVLLQDQTKVSSIPIGYESSAVAVSPDGSEVAVGGQDGKVHVYSLSGD 475 (603)
T ss_pred ccccceeecCCCceeEEEcCCCCEEEEEecCcEEEEecCCcceeeccccccceEEEcCCCCEEEEecccceEEEEEecCC
Confidence 0 00112367899999999999999999998543
Q ss_pred ---ceeeeecccceEEEEEe--cCCEEEEEeCCCeEEEEecCCCeeeeeeccCCCcccCcceEEEEEeCC--eEEEEeCC
Q 008820 456 ---FMKSMQTHKGSVFAVFL--EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQG--KLFVGCAD 528 (552)
Q Consensus 456 ---~~~~~~~h~~~v~~v~~--~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~--~l~s~s~D 528 (552)
....+..|.++|+++++ |+.+|++|...+.+.+||+.+.+....... -|.+.|.+++|+|+ ++++|+-|
T Consensus 476 ~l~ee~~~~~h~a~iT~vaySpd~~yla~~Da~rkvv~yd~~s~~~~~~~w~----FHtakI~~~aWsP~n~~vATGSlD 551 (603)
T KOG0318|consen 476 ELKEEAKLLEHRAAITDVAYSPDGAYLAAGDASRKVVLYDVASREVKTNRWA----FHTAKINCVAWSPNNKLVATGSLD 551 (603)
T ss_pred cccceeeeecccCCceEEEECCCCcEEEEeccCCcEEEEEcccCceecceee----eeeeeEEEEEeCCCceEEEecccc
Confidence 34466789999999886 999999999999999999998766322221 13788999999974 49999999
Q ss_pred CeEEEEEecCCcceeEEEecc
Q 008820 529 RTVKIALCNRQIPEIFSLLLH 549 (552)
Q Consensus 529 g~v~iw~~~~~~~~~~~~~gh 549 (552)
.+|.||+++++...+.-...|
T Consensus 552 t~Viiysv~kP~~~i~iknAH 572 (603)
T KOG0318|consen 552 TNVIIYSVKKPAKHIIIKNAH 572 (603)
T ss_pred ceEEEEEccChhhheEecccc
Confidence 999999999777665444445
No 24
>KOG0319 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=100.00 E-value=3.7e-32 Score=264.53 Aligned_cols=326 Identities=21% Similarity=0.292 Sum_probs=252.4
Q ss_pred CCccccceeeecCcceEEEeeCCCeEEEEE---------eecCccceEEEEEc----CCEEEEEeCCCcEEEEeCCCCeE
Q 008820 218 DGADIDQARAAGGVKDLVNGLSKGNVKFKD---------LQGHRDCVTGLAVG----GGFLFSSSFDKSIHVWSLKDFSH 284 (552)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------l~~H~~~V~~l~~s----~~~l~s~s~dg~I~iwd~~~~~~ 284 (552)
+..++..+++.+.+..++++..++.+++|+ |+||.+.|.++.|+ ...|++|+.|+++++||+.+...
T Consensus 104 He~Pvi~ma~~~~g~LlAtggaD~~v~VWdi~~~~~th~fkG~gGvVssl~F~~~~~~~lL~sg~~D~~v~vwnl~~~~t 183 (775)
T KOG0319|consen 104 HEAPVITMAFDPTGTLLATGGADGRVKVWDIKNGYCTHSFKGHGGVVSSLLFHPHWNRWLLASGATDGTVRVWNLNDKRT 183 (775)
T ss_pred cCCCeEEEEEcCCCceEEeccccceEEEEEeeCCEEEEEecCCCceEEEEEeCCccchhheeecCCCceEEEEEcccCch
Confidence 345577788888888888999999999887 67999999999999 45689999999999999996554
Q ss_pred -EEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCccccccc----------------------------
Q 008820 285 -VHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWN---------------------------- 335 (552)
Q Consensus 285 -~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~---------------------------- 335 (552)
+.++..|.+.|++++|++++. .+++++.|..+.+||+...+....+..+.
T Consensus 184 cl~~~~~H~S~vtsL~~~~d~~-~~ls~~RDkvi~vwd~~~~~~l~~lp~ye~~E~vv~l~~~~~~~~~~~~TaG~~g~~ 262 (775)
T KOG0319|consen 184 CLHTMILHKSAVTSLAFSEDSL-ELLSVGRDKVIIVWDLVQYKKLKTLPLYESLESVVRLREELGGKGEYIITAGGSGVV 262 (775)
T ss_pred HHHHHHhhhhheeeeeeccCCc-eEEEeccCcEEEEeehhhhhhhheechhhheeeEEEechhcCCcceEEEEecCCceE
Confidence 788899999999999999754 66889999999999975311100000000
Q ss_pred ----------------------------------------------------------cCC-------------C-----
Q 008820 336 ----------------------------------------------------------EEK-------------D----- 339 (552)
Q Consensus 336 ----------------------------------------------------------~~~-------------~----- 339 (552)
+.+ .
T Consensus 263 ~~~d~es~~~~~~~~~~~~~e~~~~~~~~~~~~~l~vtaeQnl~l~d~~~l~i~k~ivG~ndEI~Dm~~lG~e~~~laVA 342 (775)
T KOG0319|consen 263 QYWDSESGKCVYKQRQSDSEEIDHLLAIESMSQLLLVTAEQNLFLYDEDELTIVKQIVGYNDEILDMKFLGPEESHLAVA 342 (775)
T ss_pred EEEecccchhhhhhccCCchhhhcceeccccCceEEEEccceEEEEEccccEEehhhcCCchhheeeeecCCccceEEEE
Confidence 000 0
Q ss_pred --------------------ceeeeEEEEe--eCCCEEEEeeCCCcEEEEECCCC----ceeEEecCCCCCeEEEEEe--
Q 008820 340 --------------------WRYSGIHALT--TSGRYLYTGSGDRTIKAWSLLDG----TLSCTMSGHKSAVSTLAVC-- 391 (552)
Q Consensus 340 --------------------~~~~~~~~~~--~~~~~l~sgs~dg~i~iwd~~~~----~~~~~~~~h~~~v~~l~~~-- 391 (552)
.|...+.++. .+|.+|++|+.|.++++|.++++ .++....+|.+.|.+++++
T Consensus 343 TNs~~lr~y~~~~~~c~ii~GH~e~vlSL~~~~~g~llat~sKD~svilWr~~~~~~~~~~~a~~~gH~~svgava~~~~ 422 (775)
T KOG0319|consen 343 TNSPELRLYTLPTSYCQIIPGHTEAVLSLDVWSSGDLLATGSKDKSVILWRLNNNCSKSLCVAQANGHTNSVGAVAGSKL 422 (775)
T ss_pred eCCCceEEEecCCCceEEEeCchhheeeeeecccCcEEEEecCCceEEEEEecCCcchhhhhhhhcccccccceeeeccc
Confidence 0000011333 34568999999999999987544 3455668999999999998
Q ss_pred -CCEEEEEeCCCcEEEEECCCCcee---EEE-----ecCCCCceEEEEEEcCCCCEEEEEECCCcEEEEeCCc--ceeee
Q 008820 392 -NGVLYSGSRDGTIRLWSLSDHSLL---TVL-----EEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDK--FMKSM 460 (552)
Q Consensus 392 -~~~l~s~~~dg~i~iwd~~~~~~~---~~~-----~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~~--~~~~~ 460 (552)
..+|+++|.|+++++|++...+.. ..+ ...|...+.+ ++++|+.+++++|+.|.+.+||++.+ ...++
T Consensus 423 ~asffvsvS~D~tlK~W~l~~s~~~~~~~~~~~~~t~~aHdKdIN~-Vaia~ndkLiAT~SqDktaKiW~le~~~l~~vL 501 (775)
T KOG0319|consen 423 GASFFVSVSQDCTLKLWDLPKSKETAFPIVLTCRYTERAHDKDINC-VAIAPNDKLIATGSQDKTAKIWDLEQLRLLGVL 501 (775)
T ss_pred CccEEEEecCCceEEEecCCCcccccccceehhhHHHHhhcccccc-eEecCCCceEEecccccceeeecccCceEEEEe
Confidence 349999999999999999762211 111 1223444555 69999999999999999999999774 56789
Q ss_pred ecccceEEEEEe--cCCEEEEEeCCCeEEEEecCCCeeeeeeccCCCcccCcceEEEEEe--CCeEEEEeCCCeEEEEEe
Q 008820 461 QTHKGSVFAVFL--EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYW--QGKLFVGCADRTVKIALC 536 (552)
Q Consensus 461 ~~h~~~v~~v~~--~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~s~Dg~v~iw~~ 536 (552)
.+|+..|.++.| ..+.++|+|.|++|+||.+++..+..++..+ ...|....|- +.+|++++.||-|++|++
T Consensus 502 sGH~RGvw~V~Fs~~dq~laT~SgD~TvKIW~is~fSClkT~eGH-----~~aVlra~F~~~~~qliS~~adGliKlWni 576 (775)
T KOG0319|consen 502 SGHTRGVWCVSFSKNDQLLATCSGDKTVKIWSISTFSCLKTFEGH-----TSAVLRASFIRNGKQLISAGADGLIKLWNI 576 (775)
T ss_pred eCCccceEEEEeccccceeEeccCCceEEEEEeccceeeeeecCc-----cceeEeeeeeeCCcEEEeccCCCcEEEEec
Confidence 999999999998 7789999999999999999999998888764 5667777776 356999999999999999
Q ss_pred cCCcceeEEEecccc
Q 008820 537 NRQIPEIFSLLLHIN 551 (552)
Q Consensus 537 ~~~~~~~~~~~gh~~ 551 (552)
+ +...+.++..|.+
T Consensus 577 k-t~eC~~tlD~H~D 590 (775)
T KOG0319|consen 577 K-TNECEMTLDAHND 590 (775)
T ss_pred c-chhhhhhhhhccc
Confidence 8 6777888888864
No 25
>KOG0295 consensus WD40 repeat-containing protein [Function unknown]
Probab=100.00 E-value=1.1e-31 Score=241.07 Aligned_cols=265 Identities=22% Similarity=0.388 Sum_probs=231.0
Q ss_pred CccccceeeecCcceEEEeeCCCeEEEEE---------eecCccceEEEEEc--CCEEEEEeCCCcEEEEeCCC-CeEEE
Q 008820 219 GADIDQARAAGGVKDLVNGLSKGNVKFKD---------LQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKD-FSHVH 286 (552)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------l~~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~-~~~~~ 286 (552)
...+..+.+.+....+++...+.++++|+ |+||.+.|..++|+ |+++++++.|=.+++||.++ .++++
T Consensus 108 r~~vt~v~~hp~~~~v~~as~d~tikv~D~~tg~~e~~LrGHt~sv~di~~~a~Gk~l~tcSsDl~~~LWd~~~~~~c~k 187 (406)
T KOG0295|consen 108 RSSVTRVIFHPSEALVVSASEDATIKVFDTETGELERSLRGHTDSVFDISFDASGKYLATCSSDLSAKLWDFDTFFRCIK 187 (406)
T ss_pred ccceeeeeeccCceEEEEecCCceEEEEEccchhhhhhhhccccceeEEEEecCccEEEecCCccchhheeHHHHHHHHH
Confidence 34567777778888888888899999887 68999999999999 99999999998899999987 67888
Q ss_pred EEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEE
Q 008820 287 TFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKA 366 (552)
Q Consensus 287 ~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~i 366 (552)
.+.+|...|.+++|.|.+ .++++++.|.+|+.|+++++.+.. .+.++.. ...+..+..||..+++++.|.+|++
T Consensus 188 s~~gh~h~vS~V~f~P~g-d~ilS~srD~tik~We~~tg~cv~---t~~~h~e--wvr~v~v~~DGti~As~s~dqtl~v 261 (406)
T KOG0295|consen 188 SLIGHEHGVSSVFFLPLG-DHILSCSRDNTIKAWECDTGYCVK---TFPGHSE--WVRMVRVNQDGTIIASCSNDQTLRV 261 (406)
T ss_pred HhcCcccceeeEEEEecC-CeeeecccccceeEEecccceeEE---eccCchH--hEEEEEecCCeeEEEecCCCceEEE
Confidence 899999999999999987 588999999999999999875444 4444443 3345677788999999999999999
Q ss_pred EECCCCceeEEecCCCCCeEEEEEe------------C-----CEEEEEeCCCcEEEEECCCCceeEEEecCCCCceEEE
Q 008820 367 WSLLDGTLSCTMSGHKSAVSTLAVC------------N-----GVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSV 429 (552)
Q Consensus 367 wd~~~~~~~~~~~~h~~~v~~l~~~------------~-----~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 429 (552)
|-+.++++...++.|+-+|.|++|. + .++.+++.|++|++||+.++.++.++.+|. ..+..
T Consensus 262 W~~~t~~~k~~lR~hEh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk~wdv~tg~cL~tL~ghd-nwVr~- 339 (406)
T KOG0295|consen 262 WVVATKQCKAELREHEHPVECIAWAPESSYPSISEATGSTNGGQVLGSGSRDKTIKIWDVSTGMCLFTLVGHD-NWVRG- 339 (406)
T ss_pred EEeccchhhhhhhccccceEEEEecccccCcchhhccCCCCCccEEEeecccceEEEEeccCCeEEEEEeccc-ceeee-
Confidence 9999999999999999999999984 1 289999999999999999999999999884 44444
Q ss_pred EEEcCCCCEEEEEECCCcEEEEeCC--cceeeeecccceEEEEEe--cCCEEEEEeCCCeEEEEec
Q 008820 430 LSLTAVQHTLVVSHESGSIKVWRND--KFMKSMQTHKGSVFAVFL--EGKWLFTGGWDKTVSVQEL 491 (552)
Q Consensus 430 ~~~s~~~~~l~~g~~dg~i~iwd~~--~~~~~~~~h~~~v~~v~~--~~~~l~sgs~dg~i~iwd~ 491 (552)
++|+|.|++|+++.+|+++++||++ ++.+.+..|..-++++++ +..+++||+-|.++++|.-
T Consensus 340 ~af~p~Gkyi~ScaDDktlrvwdl~~~~cmk~~~ah~hfvt~lDfh~~~p~VvTGsVdqt~KvwEc 405 (406)
T KOG0295|consen 340 VAFSPGGKYILSCADDKTLRVWDLKNLQCMKTLEAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWEC 405 (406)
T ss_pred eEEcCCCeEEEEEecCCcEEEEEeccceeeeccCCCcceeEEEecCCCCceEEeccccceeeeeec
Confidence 6999999999999999999999965 578889999999999998 6679999999999999964
No 26
>KOG0319 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=100.00 E-value=3.4e-31 Score=257.90 Aligned_cols=283 Identities=19% Similarity=0.315 Sum_probs=232.3
Q ss_pred EEEEEeecCccceEEEEEcC---CEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEE
Q 008820 243 VKFKDLQGHRDCVTGLAVGG---GFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFV 319 (552)
Q Consensus 243 ~~~~~l~~H~~~V~~l~~s~---~~l~s~s~dg~I~iwd~~~~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~v 319 (552)
.....+-|..+.|..++|-| ++++.++..+.+|+|+..+..+. .+.||++.|.++....++ .+|++|+.|.++++
T Consensus 314 ~i~k~ivG~ndEI~Dm~~lG~e~~~laVATNs~~lr~y~~~~~~c~-ii~GH~e~vlSL~~~~~g-~llat~sKD~svil 391 (775)
T KOG0319|consen 314 TIVKQIVGYNDEILDMKFLGPEESHLAVATNSPELRLYTLPTSYCQ-IIPGHTEAVLSLDVWSSG-DLLATGSKDKSVIL 391 (775)
T ss_pred EEehhhcCCchhheeeeecCCccceEEEEeCCCceEEEecCCCceE-EEeCchhheeeeeecccC-cEEEEecCCceEEE
Confidence 33445778999999999984 99999999999999999887776 789999999999954444 69999999999999
Q ss_pred EeCCCCCCC-ccccccccCCCceeeeEEEEeeC-CCEEEEeeCCCcEEEEECCCCc-----ee----EEecCCCCCeEEE
Q 008820 320 WSFSFPLGH-EPLKKWNEEKDWRYSGIHALTTS-GRYLYTGSGDRTIKAWSLLDGT-----LS----CTMSGHKSAVSTL 388 (552)
Q Consensus 320 wd~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~l~sgs~dg~i~iwd~~~~~-----~~----~~~~~h~~~v~~l 388 (552)
|.++.+... .++....+|.. ....+ +++.. ...|+++|.|+++++|++...+ .+ .+...|...|+|+
T Consensus 392 Wr~~~~~~~~~~~a~~~gH~~-svgav-a~~~~~asffvsvS~D~tlK~W~l~~s~~~~~~~~~~~~~t~~aHdKdIN~V 469 (775)
T KOG0319|consen 392 WRLNNNCSKSLCVAQANGHTN-SVGAV-AGSKLGASFFVSVSQDCTLKLWDLPKSKETAFPIVLTCRYTERAHDKDINCV 469 (775)
T ss_pred EEecCCcchhhhhhhhccccc-cccee-eecccCccEEEEecCCceEEEecCCCcccccccceehhhHHHHhhcccccce
Confidence 998544332 23333334332 22223 33333 3399999999999999997521 11 1335799999999
Q ss_pred EEe--CCEEEEEeCCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEECCCcEEEEeCC--cceeeeeccc
Q 008820 389 AVC--NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRND--KFMKSMQTHK 464 (552)
Q Consensus 389 ~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~--~~~~~~~~h~ 464 (552)
+++ +.+++|||.|.+.++|++.+.....++.+|..+ +.+ +.|++....+++++.|++|+||.+. .+++++.||+
T Consensus 470 aia~ndkLiAT~SqDktaKiW~le~~~l~~vLsGH~RG-vw~-V~Fs~~dq~laT~SgD~TvKIW~is~fSClkT~eGH~ 547 (775)
T KOG0319|consen 470 AIAPNDKLIATGSQDKTAKIWDLEQLRLLGVLSGHTRG-VWC-VSFSKNDQLLATCSGDKTVKIWSISTFSCLKTFEGHT 547 (775)
T ss_pred EecCCCceEEecccccceeeecccCceEEEEeeCCccc-eEE-EEeccccceeEeccCCceEEEEEeccceeeeeecCcc
Confidence 999 449999999999999999999999999998654 455 6999999999999999999999865 5899999999
Q ss_pred ceEEEEEe--cCCEEEEEeCCCeEEEEecCCCeeeeeeccCCCcccCcceEEEEEeC--CeEEEEeCCCeEEEEEe
Q 008820 465 GSVFAVFL--EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQ--GKLFVGCADRTVKIALC 536 (552)
Q Consensus 465 ~~v~~v~~--~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~~--~~l~s~s~Dg~v~iw~~ 536 (552)
..|..++| +|+.|+|++.||.|++|+++++.+...+..+ ...|.+++.++ +.++||+.||.|.+|.=
T Consensus 548 ~aVlra~F~~~~~qliS~~adGliKlWnikt~eC~~tlD~H-----~DrvWaL~~~~~~~~~~tgg~Dg~i~~wkD 618 (775)
T KOG0319|consen 548 SAVLRASFIRNGKQLISAGADGLIKLWNIKTNECEMTLDAH-----NDRVWALSVSPLLDMFVTGGGDGRIIFWKD 618 (775)
T ss_pred ceeEeeeeeeCCcEEEeccCCCcEEEEeccchhhhhhhhhc-----cceeEEEeecCccceeEecCCCeEEEEeec
Confidence 99999998 9999999999999999999999888877664 77899999985 45899999999999974
No 27
>KOG0296 consensus Angio-associated migratory cell protein (contains WD40 repeats) [Function unknown]
Probab=100.00 E-value=4.6e-31 Score=237.12 Aligned_cols=293 Identities=18% Similarity=0.232 Sum_probs=241.6
Q ss_pred EEEEeecCccceEEEEEc--CCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEe
Q 008820 244 KFKDLQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWS 321 (552)
Q Consensus 244 ~~~~l~~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd 321 (552)
.+.+|..|++.|.+++.+ .++++||+.|..-.+|++.++.....+.+|.+.|+++.|+.++. +|++|+.+|.|+||+
T Consensus 56 S~~tF~~H~~svFavsl~P~~~l~aTGGgDD~AflW~~~~ge~~~eltgHKDSVt~~~Fshdgt-lLATGdmsG~v~v~~ 134 (399)
T KOG0296|consen 56 SLVTFDKHTDSVFAVSLHPNNNLVATGGGDDLAFLWDISTGEFAGELTGHKDSVTCCSFSHDGT-LLATGDMSGKVLVFK 134 (399)
T ss_pred ceeehhhcCCceEEEEeCCCCceEEecCCCceEEEEEccCCcceeEecCCCCceEEEEEccCce-EEEecCCCccEEEEE
Confidence 367799999999999999 89999999999999999999999999999999999999998665 889999999999999
Q ss_pred CCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe--CCEEEEEe
Q 008820 322 FSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC--NGVLYSGS 399 (552)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~ 399 (552)
..++.....+.... .-..-..++|.+..|+.|+.||.+-+|.+.++...+.+.+|+.++++=.|. +..++++.
T Consensus 135 ~stg~~~~~~~~e~-----~dieWl~WHp~a~illAG~~DGsvWmw~ip~~~~~kv~~Gh~~~ct~G~f~pdGKr~~tgy 209 (399)
T KOG0296|consen 135 VSTGGEQWKLDQEV-----EDIEWLKWHPRAHILLAGSTDGSVWMWQIPSQALCKVMSGHNSPCTCGEFIPDGKRILTGY 209 (399)
T ss_pred cccCceEEEeeccc-----CceEEEEecccccEEEeecCCCcEEEEECCCcceeeEecCCCCCcccccccCCCceEEEEe
Confidence 99876555443111 111224667777899999999999999999988889999999999999998 34999999
Q ss_pred CCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEECCCcEEEEeC--Ccceeeee--------cccceEEE
Q 008820 400 RDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRN--DKFMKSMQ--------THKGSVFA 469 (552)
Q Consensus 400 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~--~~~~~~~~--------~h~~~v~~ 469 (552)
.||+|++||+.+++++..+......... .+.++..+..++.|+.++.+++-+. ++.+.... .+...+.+
T Consensus 210 ~dgti~~Wn~ktg~p~~~~~~~e~~~~~-~~~~~~~~~~~~~g~~e~~~~~~~~~sgKVv~~~n~~~~~l~~~~e~~~es 288 (399)
T KOG0296|consen 210 DDGTIIVWNPKTGQPLHKITQAEGLELP-CISLNLAGSTLTKGNSEGVACGVNNGSGKVVNCNNGTVPELKPSQEELDES 288 (399)
T ss_pred cCceEEEEecCCCceeEEecccccCcCC-ccccccccceeEeccCCccEEEEccccceEEEecCCCCccccccchhhhhh
Confidence 9999999999999999998865433333 3688888899999999998888873 33333333 34444444
Q ss_pred EEe-----cCCEEEEEeCCCeEEEEecCCCeeeeeeccCCCcccCcceEEEEEeC-CeEEEEeCCCeEEEEEecCCccee
Q 008820 470 VFL-----EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQ-GKLFVGCADRTVKIALCNRQIPEI 543 (552)
Q Consensus 470 v~~-----~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~~-~~l~s~s~Dg~v~iw~~~~~~~~~ 543 (552)
+.+ .=.+.|+|+.||+|.|||+...+++....+ ...|..+.|-+ ..|++++.||.|+.||.. ++..+
T Consensus 289 ve~~~~ss~lpL~A~G~vdG~i~iyD~a~~~~R~~c~h------e~~V~~l~w~~t~~l~t~c~~g~v~~wDaR-tG~l~ 361 (399)
T KOG0296|consen 289 VESIPSSSKLPLAACGSVDGTIAIYDLAASTLRHICEH------EDGVTKLKWLNTDYLLTACANGKVRQWDAR-TGQLK 361 (399)
T ss_pred hhhcccccccchhhcccccceEEEEecccchhheeccC------CCceEEEEEcCcchheeeccCceEEeeecc-ccceE
Confidence 443 445789999999999999998776666554 55699999987 669999999999999998 88899
Q ss_pred EEEeccc
Q 008820 544 FSLLLHI 550 (552)
Q Consensus 544 ~~~~gh~ 550 (552)
+.+.||.
T Consensus 362 ~~y~GH~ 368 (399)
T KOG0296|consen 362 FTYTGHQ 368 (399)
T ss_pred EEEecCc
Confidence 9999995
No 28
>KOG0265 consensus U5 snRNP-specific protein-like factor and related proteins [RNA processing and modification]
Probab=100.00 E-value=6.9e-31 Score=230.23 Aligned_cols=266 Identities=20% Similarity=0.298 Sum_probs=224.2
Q ss_pred CccccceeeecCcceEEEeeCCCeEEEEE----------eecCccceEEEEEc--CCEEEEEeCCCcEEEEeCCCCeEEE
Q 008820 219 GADIDQARAAGGVKDLVNGLSKGNVKFKD----------LQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVH 286 (552)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------l~~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~~~~~ 286 (552)
...+....|.+++..++++..|..+.+|. ++||+++|..+.|. ++.+++++.|.+|+.||.++|+.++
T Consensus 47 ~geI~~~~F~P~gs~~aSgG~Dr~I~LWnv~gdceN~~~lkgHsgAVM~l~~~~d~s~i~S~gtDk~v~~wD~~tG~~~r 126 (338)
T KOG0265|consen 47 KGEIYTIKFHPDGSCFASGGSDRAIVLWNVYGDCENFWVLKGHSGAVMELHGMRDGSHILSCGTDKTVRGWDAETGKRIR 126 (338)
T ss_pred cceEEEEEECCCCCeEeecCCcceEEEEeccccccceeeeccccceeEeeeeccCCCEEEEecCCceEEEEecccceeee
Confidence 34588899999999999999999999987 68999999999999 9999999999999999999999999
Q ss_pred EEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEE
Q 008820 287 TFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKA 366 (552)
Q Consensus 287 ~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~i 366 (552)
.+++|...|+++.-..-+..++.+++.|+++++||++.....+... .. ......+|...+..+++|+-|+.|++
T Consensus 127 k~k~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~~~~t~~---~k---yqltAv~f~d~s~qv~sggIdn~ikv 200 (338)
T KOG0265|consen 127 KHKGHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKEAIKTFE---NK---YQLTAVGFKDTSDQVISGGIDNDIKV 200 (338)
T ss_pred hhccccceeeecCccccCCeEEEecCCCceEEEEeecccchhhccc---cc---eeEEEEEecccccceeeccccCceee
Confidence 9999999999998666678899999999999999999654433332 11 11122345556779999999999999
Q ss_pred EECCCCceeEEecCCCCCeEEEEEe--CCEEEEEeCCCcEEEEECCCC----ceeEEEecCCCCce--EEEEEEcCCCCE
Q 008820 367 WSLLDGTLSCTMSGHKSAVSTLAVC--NGVLYSGSRDGTIRLWSLSDH----SLLTVLEEDSSGAV--SSVLSLTAVQHT 438 (552)
Q Consensus 367 wd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~----~~~~~~~~~~~~~~--~~~~~~s~~~~~ 438 (552)
||++.....+.+.||.++|+.+..+ +.++.+-+.|.++++||++.. +++..+.++..+.. ..-++|+|+++.
T Consensus 201 Wd~r~~d~~~~lsGh~DtIt~lsls~~gs~llsnsMd~tvrvwd~rp~~p~~R~v~if~g~~hnfeknlL~cswsp~~~~ 280 (338)
T KOG0265|consen 201 WDLRKNDGLYTLSGHADTITGLSLSRYGSFLLSNSMDNTVRVWDVRPFAPSQRCVKIFQGHIHNFEKNLLKCSWSPNGTK 280 (338)
T ss_pred eccccCcceEEeecccCceeeEEeccCCCccccccccceEEEEEecccCCCCceEEEeecchhhhhhhcceeeccCCCCc
Confidence 9999999999999999999999999 459999999999999999853 34666665432211 122589999999
Q ss_pred EEEEECCCcEEEEeC--CcceeeeecccceEEEEEe--cCCEEEEEeCCCeEEEEe
Q 008820 439 LVVSHESGSIKVWRN--DKFMKSMQTHKGSVFAVFL--EGKWLFTGGWDKTVSVQE 490 (552)
Q Consensus 439 l~~g~~dg~i~iwd~--~~~~~~~~~h~~~v~~v~~--~~~~l~sgs~dg~i~iwd 490 (552)
+.+|+.|..+++||. +..+..+.+|.+.|.++.| ....|.+++.|.+|++=.
T Consensus 281 i~ags~dr~vyvwd~~~r~~lyklpGh~gsvn~~~Fhp~e~iils~~sdk~i~lge 336 (338)
T KOG0265|consen 281 ITAGSADRFVYVWDTTSRRILYKLPGHYGSVNEVDFHPTEPIILSCSSDKTIYLGE 336 (338)
T ss_pred cccccccceEEEeecccccEEEEcCCcceeEEEeeecCCCcEEEEeccCceeEeec
Confidence 999999999999994 4578889999999999987 788999999999998743
No 29
>KOG0263 consensus Transcription initiation factor TFIID, subunit TAF5 (also component of histone acetyltransferase SAGA) [Transcription]
Probab=100.00 E-value=4.9e-31 Score=259.47 Aligned_cols=231 Identities=27% Similarity=0.449 Sum_probs=203.1
Q ss_pred CCccccceeeecCcceEEEeeCCCeEEEEE----------------------------------------eecCccceEE
Q 008820 218 DGADIDQARAAGGVKDLVNGLSKGNVKFKD----------------------------------------LQGHRDCVTG 257 (552)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------------------l~~H~~~V~~ 257 (552)
....+.++.++.+...++.++.+..+.+|. +.||.++|..
T Consensus 377 t~~~v~ca~fSddssmlA~Gf~dS~i~~~Sl~p~kl~~lk~~~~l~~~d~~sad~~~~~~D~~~~~~~~~L~GH~GPVyg 456 (707)
T KOG0263|consen 377 TYQGVTCAEFSDDSSMLACGFVDSSVRVWSLTPKKLKKLKDASDLSNIDTESADVDVDMLDDDSSGTSRTLYGHSGPVYG 456 (707)
T ss_pred cCCcceeEeecCCcchhhccccccEEEEEecchhhhccccchhhhccccccccchhhhhccccCCceeEEeecCCCceee
Confidence 344677888888888888888888887776 3479999999
Q ss_pred EEEc--CCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCccccccc
Q 008820 258 LAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWN 335 (552)
Q Consensus 258 l~~s--~~~l~s~s~dg~I~iwd~~~~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~ 335 (552)
+.|+ .++|+++|.|++||+|.+.+..++-.++||..+|.++.|+|. +.+++|++.|++.++|..+.. .+++.+.
T Consensus 457 ~sFsPd~rfLlScSED~svRLWsl~t~s~~V~y~GH~~PVwdV~F~P~-GyYFatas~D~tArLWs~d~~---~PlRifa 532 (707)
T KOG0263|consen 457 CSFSPDRRFLLSCSEDSSVRLWSLDTWSCLVIYKGHLAPVWDVQFAPR-GYYFATASHDQTARLWSTDHN---KPLRIFA 532 (707)
T ss_pred eeecccccceeeccCCcceeeeecccceeEEEecCCCcceeeEEecCC-ceEEEecCCCceeeeeecccC---Cchhhhc
Confidence 9999 899999999999999999999999999999999999999984 678999999999999998864 4444444
Q ss_pred cCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe--CCEEEEEeCCCcEEEEECCCCc
Q 008820 336 EEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC--NGVLYSGSRDGTIRLWSLSDHS 413 (552)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~ 413 (552)
+|.. ...+..|+|+.+++++||.|.+|++||+.+|..++.|.||.++|++++|+ +.+|++|+.||.|.+||+.+++
T Consensus 533 ghls--DV~cv~FHPNs~Y~aTGSsD~tVRlWDv~~G~~VRiF~GH~~~V~al~~Sp~Gr~LaSg~ed~~I~iWDl~~~~ 610 (707)
T KOG0263|consen 533 GHLS--DVDCVSFHPNSNYVATGSSDRTVRLWDVSTGNSVRIFTGHKGPVTALAFSPCGRYLASGDEDGLIKIWDLANGS 610 (707)
T ss_pred cccc--ccceEEECCcccccccCCCCceEEEEEcCCCcEEEEecCCCCceEEEEEcCCCceEeecccCCcEEEEEcCCCc
Confidence 4432 23457899999999999999999999999999999999999999999999 3499999999999999999999
Q ss_pred eeEEEecCCCCceEEEEEEcCCCCEEEEEECCCcEEEEeCCcc
Q 008820 414 LLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDKF 456 (552)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~~~ 456 (552)
.+..+..| .+.+.+ +.|+.+|..|++|+.|.+|++||..+.
T Consensus 611 ~v~~l~~H-t~ti~S-lsFS~dg~vLasgg~DnsV~lWD~~~~ 651 (707)
T KOG0263|consen 611 LVKQLKGH-TGTIYS-LSFSRDGNVLASGGADNSVRLWDLTKV 651 (707)
T ss_pred chhhhhcc-cCceeE-EEEecCCCEEEecCCCCeEEEEEchhh
Confidence 99999988 666666 699999999999999999999996543
No 30
>KOG0263 consensus Transcription initiation factor TFIID, subunit TAF5 (also component of histone acetyltransferase SAGA) [Transcription]
Probab=100.00 E-value=2e-31 Score=262.26 Aligned_cols=248 Identities=23% Similarity=0.371 Sum_probs=213.7
Q ss_pred CCCeEEEEEeecCccceEEEEEc--CCEEEEEeCCCcEEEEeCCCC-------------------------------eEE
Q 008820 239 SKGNVKFKDLQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDF-------------------------------SHV 285 (552)
Q Consensus 239 ~~~~~~~~~l~~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~-------------------------------~~~ 285 (552)
....++++++..-...++|..|+ +.++|.|-.|..|++|.+... ...
T Consensus 365 ~lpSic~YT~~nt~~~v~ca~fSddssmlA~Gf~dS~i~~~Sl~p~kl~~lk~~~~l~~~d~~sad~~~~~~D~~~~~~~ 444 (707)
T KOG0263|consen 365 SLPSICMYTFHNTYQGVTCAEFSDDSSMLACGFVDSSVRVWSLTPKKLKKLKDASDLSNIDTESADVDVDMLDDDSSGTS 444 (707)
T ss_pred CCCcEEEEEEEEcCCcceeEeecCCcchhhccccccEEEEEecchhhhccccchhhhccccccccchhhhhccccCCcee
Confidence 45678889988888899999999 789999999999999987631 223
Q ss_pred EEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEE
Q 008820 286 HTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIK 365 (552)
Q Consensus 286 ~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~ 365 (552)
+++.+|.++|..+.|+|+.. +|++|+.|+++|+|.+++.......+ +|. .......|+|.|-+++||+.|++-+
T Consensus 445 ~~L~GH~GPVyg~sFsPd~r-fLlScSED~svRLWsl~t~s~~V~y~---GH~--~PVwdV~F~P~GyYFatas~D~tAr 518 (707)
T KOG0263|consen 445 RTLYGHSGPVYGCSFSPDRR-FLLSCSEDSSVRLWSLDTWSCLVIYK---GHL--APVWDVQFAPRGYYFATASHDQTAR 518 (707)
T ss_pred EEeecCCCceeeeeeccccc-ceeeccCCcceeeeecccceeEEEec---CCC--cceeeEEecCCceEEEecCCCceee
Confidence 55789999999999999654 88999999999999998754333332 322 2223346889999999999999999
Q ss_pred EEECCCCceeEEecCCCCCeEEEEEeCC--EEEEEeCCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEE
Q 008820 366 AWSLLDGTLSCTMSGHKSAVSTLAVCNG--VLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSH 443 (552)
Q Consensus 366 iwd~~~~~~~~~~~~h~~~v~~l~~~~~--~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~ 443 (552)
+|......+.+.+.+|-+.|.|+.|+++ ++++||.|.++|+||..+|..++.|.+| .+.+.+ ++|+|+|++|++|+
T Consensus 519 LWs~d~~~PlRifaghlsDV~cv~FHPNs~Y~aTGSsD~tVRlWDv~~G~~VRiF~GH-~~~V~a-l~~Sp~Gr~LaSg~ 596 (707)
T KOG0263|consen 519 LWSTDHNKPLRIFAGHLSDVDCVSFHPNSNYVATGSSDRTVRLWDVSTGNSVRIFTGH-KGPVTA-LAFSPCGRYLASGD 596 (707)
T ss_pred eeecccCCchhhhcccccccceEEECCcccccccCCCCceEEEEEcCCCcEEEEecCC-CCceEE-EEEcCCCceEeecc
Confidence 9999999999999999999999999954 9999999999999999999999999886 456665 79999999999999
Q ss_pred CCCcEEEEeCC--cceeeeecccceEEEEEe--cCCEEEEEeCCCeEEEEecCCC
Q 008820 444 ESGSIKVWRND--KFMKSMQTHKGSVFAVFL--EGKWLFTGGWDKTVSVQELAGD 494 (552)
Q Consensus 444 ~dg~i~iwd~~--~~~~~~~~h~~~v~~v~~--~~~~l~sgs~dg~i~iwd~~~~ 494 (552)
.||.|.+||+. +.+..+.+|++.|.+++| +|..|++||.|++|++||+...
T Consensus 597 ed~~I~iWDl~~~~~v~~l~~Ht~ti~SlsFS~dg~vLasgg~DnsV~lWD~~~~ 651 (707)
T KOG0263|consen 597 EDGLIKIWDLANGSLVKQLKGHTGTIYSLSFSRDGNVLASGGADNSVRLWDLTKV 651 (707)
T ss_pred cCCcEEEEEcCCCcchhhhhcccCceeEEEEecCCCEEEecCCCCeEEEEEchhh
Confidence 99999999965 578899999999999998 9999999999999999998743
No 31
>KOG0274 consensus Cdc4 and related F-box and WD-40 proteins [General function prediction only]
Probab=100.00 E-value=1.3e-30 Score=262.32 Aligned_cols=280 Identities=25% Similarity=0.351 Sum_probs=244.3
Q ss_pred CccceEEEEEcCCEEEEEeCCCcEEEEeCCCCeEEEE-EeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCc
Q 008820 251 HRDCVTGLAVGGGFLFSSSFDKSIHVWSLKDFSHVHT-FKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHE 329 (552)
Q Consensus 251 H~~~V~~l~~s~~~l~s~s~dg~I~iwd~~~~~~~~~-~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~ 329 (552)
|...+.+..|.++++++++.|++|++||..++..+.. +.+|.+.|.++++.. +..++++|+.|.++++||..++.+..
T Consensus 207 ~~~~~~~~q~~~~~~~~~s~~~tl~~~~~~~~~~i~~~l~GH~g~V~~l~~~~-~~~~lvsgS~D~t~rvWd~~sg~C~~ 285 (537)
T KOG0274|consen 207 DDHVVLCLQLHDGFFKSGSDDSTLHLWDLNNGYLILTRLVGHFGGVWGLAFPS-GGDKLVSGSTDKTERVWDCSTGECTH 285 (537)
T ss_pred CcchhhhheeecCeEEecCCCceeEEeecccceEEEeeccCCCCCceeEEEec-CCCEEEEEecCCcEEeEecCCCcEEE
Confidence 6677888999999999999999999999999999988 999999999999965 77799999999999999998876655
Q ss_pred cccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEeCCEEEEEeCCCcEEEEEC
Q 008820 330 PLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVCNGVLYSGSRDGTIRLWSL 409 (552)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~~~dg~i~iwd~ 409 (552)
.+.. +...+.++...+..+++|+.|.+|++|++.++.++..+.+|..+|.++..+++++++|+.|++|++||+
T Consensus 286 ~l~g-------h~stv~~~~~~~~~~~sgs~D~tVkVW~v~n~~~l~l~~~h~~~V~~v~~~~~~lvsgs~d~~v~VW~~ 358 (537)
T KOG0274|consen 286 SLQG-------HTSSVRCLTIDPFLLVSGSRDNTVKVWDVTNGACLNLLRGHTGPVNCVQLDEPLLVSGSYDGTVKVWDP 358 (537)
T ss_pred EecC-------CCceEEEEEccCceEeeccCCceEEEEeccCcceEEEeccccccEEEEEecCCEEEEEecCceEEEEEh
Confidence 5543 334567888888899999999999999999999999999999999999999999999999999999999
Q ss_pred CCCceeEEEecCCCCceEEEEEEcCCCCEEEEEECCCcEEEEeCC---cceeeeecccceEEEEEecCCEEEEEeCCCeE
Q 008820 410 SDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRND---KFMKSMQTHKGSVFAVFLEGKWLFTGGWDKTV 486 (552)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~---~~~~~~~~h~~~v~~v~~~~~~l~sgs~dg~i 486 (552)
.++++++.+.+| .+.+.+ +.+... ..+++|+.|++|++||++ +++..+.+|..-+..+.+.+++|++++.|++|
T Consensus 359 ~~~~cl~sl~gH-~~~V~s-l~~~~~-~~~~Sgs~D~~IkvWdl~~~~~c~~tl~~h~~~v~~l~~~~~~Lvs~~aD~~I 435 (537)
T KOG0274|consen 359 RTGKCLKSLSGH-TGRVYS-LIVDSE-NRLLSGSLDTTIKVWDLRTKRKCIHTLQGHTSLVSSLLLRDNFLVSSSADGTI 435 (537)
T ss_pred hhceeeeeecCC-cceEEE-EEecCc-ceEEeeeeccceEeecCCchhhhhhhhcCCcccccccccccceeEeccccccE
Confidence 999999999986 455555 344443 899999999999999964 46889999999999999999999999999999
Q ss_pred EEEecCCCeeeeeeccCCCcccCcceEEEEEeCCeEEEEeCCCeEEEEEecCCcceeEEE
Q 008820 487 SVQELAGDEFEEDVIPTGAIPCGSVITALLYWQGKLFVGCADRTVKIALCNRQIPEIFSL 546 (552)
Q Consensus 487 ~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~l~s~s~Dg~v~iw~~~~~~~~~~~~ 546 (552)
++||..++++....... +...|.++++....+++++.||.+++||++ ++.....+
T Consensus 436 k~WD~~~~~~~~~~~~~----~~~~v~~l~~~~~~il~s~~~~~~~l~dl~-~~~~~~~l 490 (537)
T KOG0274|consen 436 KLWDAEEGECLRTLEGR----HVGGVSALALGKEEILCSSDDGSVKLWDLR-SGTLIRTL 490 (537)
T ss_pred EEeecccCceeeeeccC----CcccEEEeecCcceEEEEecCCeeEEEecc-cCchhhhh
Confidence 99999998887776653 256688888877789999999999999998 45544443
No 32
>KOG0266 consensus WD40 repeat-containing protein [General function prediction only]
Probab=100.00 E-value=4.5e-30 Score=259.75 Aligned_cols=283 Identities=23% Similarity=0.387 Sum_probs=233.7
Q ss_pred EEeecC-ccceEEEEEc--CCEEEEEeCCCcEEEEeCCCCe--EEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEE
Q 008820 246 KDLQGH-RDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFS--HVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVW 320 (552)
Q Consensus 246 ~~l~~H-~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~~--~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vw 320 (552)
..+.+| ...|.++.|+ |+.+++++.|+.+++|+..+.+ ..+.+.+|...|.+++|+|++. ++++++.|++|++|
T Consensus 152 ~~~~~~~~~sv~~~~fs~~g~~l~~~~~~~~i~~~~~~~~~~~~~~~l~~h~~~v~~~~fs~d~~-~l~s~s~D~tiriw 230 (456)
T KOG0266|consen 152 QTLAGHECPSVTCVDFSPDGRALAAASSDGLIRIWKLEGIKSNLLRELSGHTRGVSDVAFSPDGS-YLLSGSDDKTLRIW 230 (456)
T ss_pred eeecccccCceEEEEEcCCCCeEEEccCCCcEEEeecccccchhhccccccccceeeeEECCCCc-EEEEecCCceEEEe
Confidence 345454 7899999999 9999999999999999998877 7788889999999999999776 88999999999999
Q ss_pred eCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe--CCEEEEE
Q 008820 321 SFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC--NGVLYSG 398 (552)
Q Consensus 321 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~ 398 (552)
|+.. ....++.+.+|.... ...+|+++++.+++|+.|++|++||+++++++..+.+|.+.|++++|+ +++|+++
T Consensus 231 d~~~--~~~~~~~l~gH~~~v--~~~~f~p~g~~i~Sgs~D~tvriWd~~~~~~~~~l~~hs~~is~~~f~~d~~~l~s~ 306 (456)
T KOG0266|consen 231 DLKD--DGRNLKTLKGHSTYV--TSVAFSPDGNLLVSGSDDGTVRIWDVRTGECVRKLKGHSDGISGLAFSPDGNLLVSA 306 (456)
T ss_pred eccC--CCeEEEEecCCCCce--EEEEecCCCCEEEEecCCCcEEEEeccCCeEEEeeeccCCceEEEEECCCCCEEEEc
Confidence 9932 234555555655433 456899999999999999999999999999999999999999999999 4499999
Q ss_pred eCCCcEEEEECCCCc--eeEEEecCCCCceEEEEEEcCCCCEEEEEECCCcEEEEeCC--cceeeeecccceEEEEE---
Q 008820 399 SRDGTIRLWSLSDHS--LLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRND--KFMKSMQTHKGSVFAVF--- 471 (552)
Q Consensus 399 ~~dg~i~iwd~~~~~--~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~--~~~~~~~~h~~~v~~v~--- 471 (552)
+.|+.|++||+.++. +...+...........+.|+|++.++++++.|+.+++||++ .....+.+|...+.++.
T Consensus 307 s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~fsp~~~~ll~~~~d~~~~~w~l~~~~~~~~~~~~~~~~~~~~~~~ 386 (456)
T KOG0266|consen 307 SYDGTIRVWDLETGSKLCLKLLSGAENSAPVTSVQFSPNGKYLLSASLDRTLKLWDLRSGKSVGTYTGHSNLVRCIFSPT 386 (456)
T ss_pred CCCccEEEEECCCCceeeeecccCCCCCCceeEEEECCCCcEEEEecCCCeEEEEEccCCcceeeecccCCcceeEeccc
Confidence 999999999999999 55666655443134447999999999999999999999976 46778888887654442
Q ss_pred --ecCCEEEEEeCCCeEEEEecCCCeeeeeeccCCCcccCcceEEEEEeC--CeEEEEe--CCCeEEEEEec
Q 008820 472 --LEGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQ--GKLFVGC--ADRTVKIALCN 537 (552)
Q Consensus 472 --~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~~--~~l~s~s--~Dg~v~iw~~~ 537 (552)
..+.++++|+.|+.|++||+.++........+. ...+..+.+++ +.+++++ .|+.+++|..+
T Consensus 387 ~~~~~~~i~sg~~d~~v~~~~~~s~~~~~~l~~h~----~~~~~~~~~~~~~~~~~s~s~~~d~~~~~w~~~ 454 (456)
T KOG0266|consen 387 LSTGGKLIYSGSEDGSVYVWDSSSGGILQRLEGHS----KAAVSDLSSHPTENLIASSSFEGDGLIRLWKYD 454 (456)
T ss_pred ccCCCCeEEEEeCCceEEEEeCCccchhhhhcCCC----CCceeccccCCCcCeeeecCcCCCceEEEecCC
Confidence 289999999999999999999866655544432 45678888885 5577777 79999999875
No 33
>KOG0315 consensus G-protein beta subunit-like protein (contains WD40 repeats) [General function prediction only]
Probab=99.98 E-value=1.4e-29 Score=216.20 Aligned_cols=261 Identities=18% Similarity=0.314 Sum_probs=205.6
Q ss_pred ceEEEeeCCCeEEEEE---------eecCccceEEEEEc--CCEEEEEeCCCcEEEEeCCCCe--EEEEEeCCCCCeEEE
Q 008820 232 KDLVNGLSKGNVKFKD---------LQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFS--HVHTFKGHDHKVMAV 298 (552)
Q Consensus 232 ~~~~~~~~~~~~~~~~---------l~~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~~--~~~~~~~h~~~v~~v 298 (552)
-.+++.+.|.++++|+ ++-..+.|+.+... ++.||+|+. ..||+||+++++ ++.++.+|+..|+++
T Consensus 11 viLvsA~YDhTIRfWqa~tG~C~rTiqh~dsqVNrLeiTpdk~~LAaa~~-qhvRlyD~~S~np~Pv~t~e~h~kNVtaV 89 (311)
T KOG0315|consen 11 VILVSAGYDHTIRFWQALTGICSRTIQHPDSQVNRLEITPDKKDLAAAGN-QHVRLYDLNSNNPNPVATFEGHTKNVTAV 89 (311)
T ss_pred eEEEeccCcceeeeeehhcCeEEEEEecCccceeeEEEcCCcchhhhccC-CeeEEEEccCCCCCceeEEeccCCceEEE
Confidence 3456666777777766 44556789999998 677777765 479999998765 589999999999999
Q ss_pred EEecCCCCEEEEEcCCCcEEEEeCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCceeEEe
Q 008820 299 VYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTM 378 (552)
Q Consensus 299 ~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~ 378 (552)
.|..++. .+++|+.||+++|||++.....+.++.. .......++|+...|++|..+|.|++||+....+...+
T Consensus 90 gF~~dgr-WMyTgseDgt~kIWdlR~~~~qR~~~~~------spVn~vvlhpnQteLis~dqsg~irvWDl~~~~c~~~l 162 (311)
T KOG0315|consen 90 GFQCDGR-WMYTGSEDGTVKIWDLRSLSCQRNYQHN------SPVNTVVLHPNQTELISGDQSGNIRVWDLGENSCTHEL 162 (311)
T ss_pred EEeecCe-EEEecCCCceEEEEeccCcccchhccCC------CCcceEEecCCcceEEeecCCCcEEEEEccCCcccccc
Confidence 9987554 7799999999999999975544433322 11123356677779999999999999999988776655
Q ss_pred -cCCCCCeEEEEEe-C-CEEEEEeCCCcEEEEECCCCc------eeEEEecCCCCceEEEEEEcCCCCEEEEEECCCcEE
Q 008820 379 -SGHKSAVSTLAVC-N-GVLYSGSRDGTIRLWSLSDHS------LLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIK 449 (552)
Q Consensus 379 -~~h~~~v~~l~~~-~-~~l~s~~~dg~i~iwd~~~~~------~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~ 449 (552)
......|.++... + .+++.+...|+.++|++-+.. ++.+++.+ .+.+.. +.+||++++|++++.|.+++
T Consensus 163 iPe~~~~i~sl~v~~dgsml~a~nnkG~cyvW~l~~~~~~s~l~P~~k~~ah-~~~il~-C~lSPd~k~lat~ssdktv~ 240 (311)
T KOG0315|consen 163 IPEDDTSIQSLTVMPDGSMLAAANNKGNCYVWRLLNHQTASELEPVHKFQAH-NGHILR-CLLSPDVKYLATCSSDKTVK 240 (311)
T ss_pred CCCCCcceeeEEEcCCCcEEEEecCCccEEEEEccCCCccccceEhhheecc-cceEEE-EEECCCCcEEEeecCCceEE
Confidence 3345678888887 4 488999999999999997643 45556655 344554 58999999999999999999
Q ss_pred EEeCCc---ceeeeecccceEEEEEe--cCCEEEEEeCCCeEEEEecCCCeeeeeecc
Q 008820 450 VWRNDK---FMKSMQTHKGSVFAVFL--EGKWLFTGGWDKTVSVQELAGDEFEEDVIP 502 (552)
Q Consensus 450 iwd~~~---~~~~~~~h~~~v~~v~~--~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~ 502 (552)
||++.. ....+++|...+....| ||.||++|+.|+.+++||++.++.......
T Consensus 241 iwn~~~~~kle~~l~gh~rWvWdc~FS~dg~YlvTassd~~~rlW~~~~~k~v~qy~g 298 (311)
T KOG0315|consen 241 IWNTDDFFKLELVLTGHQRWVWDCAFSADGEYLVTASSDHTARLWDLSAGKEVRQYQG 298 (311)
T ss_pred EEecCCceeeEEEeecCCceEEeeeeccCccEEEecCCCCceeecccccCceeeecCC
Confidence 999765 45678899999999888 999999999999999999998876655444
No 34
>KOG0284 consensus Polyadenylation factor I complex, subunit PFS2 [RNA processing and modification]
Probab=99.98 E-value=6.2e-32 Score=245.85 Aligned_cols=266 Identities=20% Similarity=0.366 Sum_probs=222.8
Q ss_pred CCccccceeeecCcceEEEeeCCCeEEEEE---------eecCccceEEEEEc--CCEEEEEeCCCcEEEEeCCCCeEEE
Q 008820 218 DGADIDQARAAGGVKDLVNGLSKGNVKFKD---------LQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVH 286 (552)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------l~~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~~~~~ 286 (552)
-..+++.+...+++++++++...|...+|. +++|..+|+++.|+ +.+++||+.+|.|++|+.+ ...++
T Consensus 95 vkc~V~~v~WtPeGRRLltgs~SGEFtLWNg~~fnFEtilQaHDs~Vr~m~ws~~g~wmiSgD~gG~iKyWqpn-mnnVk 173 (464)
T KOG0284|consen 95 VKCPVNVVRWTPEGRRLLTGSQSGEFTLWNGTSFNFETILQAHDSPVRTMKWSHNGTWMISGDKGGMIKYWQPN-MNNVK 173 (464)
T ss_pred cccceeeEEEcCCCceeEeecccccEEEecCceeeHHHHhhhhcccceeEEEccCCCEEEEcCCCceEEecccc-hhhhH
Confidence 345688899999999999999999999998 47899999999999 9999999999999999965 44455
Q ss_pred EEeCCC-CCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEE
Q 008820 287 TFKGHD-HKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIK 365 (552)
Q Consensus 287 ~~~~h~-~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~ 365 (552)
.++.|. ..|++++|+|++. .+++|+.||+|+|||...++....+.. + .+.. ....++|....+++|+.|..|+
T Consensus 174 ~~~ahh~eaIRdlafSpnDs-kF~t~SdDg~ikiWdf~~~kee~vL~G---H-gwdV-ksvdWHP~kgLiasgskDnlVK 247 (464)
T KOG0284|consen 174 IIQAHHAEAIRDLAFSPNDS-KFLTCSDDGTIKIWDFRMPKEERVLRG---H-GWDV-KSVDWHPTKGLIASGSKDNLVK 247 (464)
T ss_pred HhhHhhhhhhheeccCCCCc-eeEEecCCCeEEEEeccCCchhheecc---C-CCCc-ceeccCCccceeEEccCCceeE
Confidence 555554 9999999999554 779999999999999987665554432 2 2122 2346677777999999999999
Q ss_pred EEECCCCceeEEecCCCCCeEEEEEe--CCEEEEEeCCCcEEEEECCCCceeEEEecCCCCceEEEEEEcC-CCCEEEEE
Q 008820 366 AWSLLDGTLSCTMSGHKSAVSTLAVC--NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTA-VQHTLVVS 442 (552)
Q Consensus 366 iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~-~~~~l~~g 442 (552)
+||.++++++.++.+|+..|..+.|+ +++|+++|.|..++++|+++.+.+.+++.|.+ .+.+ +.|+| ...+|.+|
T Consensus 248 lWDprSg~cl~tlh~HKntVl~~~f~~n~N~Llt~skD~~~kv~DiR~mkEl~~~r~Hkk-dv~~-~~WhP~~~~lftsg 325 (464)
T KOG0284|consen 248 LWDPRSGSCLATLHGHKNTVLAVKFNPNGNWLLTGSKDQSCKVFDIRTMKELFTYRGHKK-DVTS-LTWHPLNESLFTSG 325 (464)
T ss_pred eecCCCcchhhhhhhccceEEEEEEcCCCCeeEEccCCceEEEEehhHhHHHHHhhcchh-hhee-eccccccccceeec
Confidence 99999999999999999999999999 55999999999999999999999999988754 3444 46666 56788899
Q ss_pred ECCCcEEEEeCC--cceeee-ecccceEEEEEe--cCCEEEEEeCCCeEEEEecC
Q 008820 443 HESGSIKVWRND--KFMKSM-QTHKGSVFAVFL--EGKWLFTGGWDKTVSVQELA 492 (552)
Q Consensus 443 ~~dg~i~iwd~~--~~~~~~-~~h~~~v~~v~~--~~~~l~sgs~dg~i~iwd~~ 492 (552)
+.||.|..|... +++..+ .+|...|.++++ -|..|++|+.|.++++|.-.
T Consensus 326 g~Dgsvvh~~v~~~~p~~~i~~AHd~~iwsl~~hPlGhil~tgsnd~t~rfw~r~ 380 (464)
T KOG0284|consen 326 GSDGSVVHWVVGLEEPLGEIPPAHDGEIWSLAYHPLGHILATGSNDRTVRFWTRN 380 (464)
T ss_pred cCCCceEEEeccccccccCCCcccccceeeeeccccceeEeecCCCcceeeeccC
Confidence 999999999854 344333 579999999997 79999999999999999653
No 35
>KOG0293 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.98 E-value=1.5e-30 Score=237.12 Aligned_cols=279 Identities=19% Similarity=0.250 Sum_probs=224.6
Q ss_pred EEeecCccceEEEEEc--CCEEEEEeCCCcEEEEeCCCC---eEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEE
Q 008820 246 KDLQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDF---SHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVW 320 (552)
Q Consensus 246 ~~l~~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~---~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vw 320 (552)
..+..|.+.|+-+.|+ |++||||+.|.+..+|++..- +..+++.+|..+|..+.|+|++. ++++|+.|..+++|
T Consensus 218 qil~~htdEVWfl~FS~nGkyLAsaSkD~Taiiw~v~~d~~~kl~~tlvgh~~~V~yi~wSPDdr-yLlaCg~~e~~~lw 296 (519)
T KOG0293|consen 218 QILQDHTDEVWFLQFSHNGKYLASASKDSTAIIWIVVYDVHFKLKKTLVGHSQPVSYIMWSPDDR-YLLACGFDEVLSLW 296 (519)
T ss_pred hhHhhCCCcEEEEEEcCCCeeEeeccCCceEEEEEEecCcceeeeeeeecccCceEEEEECCCCC-eEEecCchHheeec
Confidence 4478999999999999 999999999999999987543 45788999999999999999776 66788888889999
Q ss_pred eCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCceeEEecCCC-CCeEEEEEe-C-CEEEE
Q 008820 321 SFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHK-SAVSTLAVC-N-GVLYS 397 (552)
Q Consensus 321 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~-~~v~~l~~~-~-~~l~s 397 (552)
|+.++........- .. ......++.|||..+++|+.|+++..||++ |+.....++-. ..|.+++.. + ..+++
T Consensus 297 Dv~tgd~~~~y~~~---~~-~S~~sc~W~pDg~~~V~Gs~dr~i~~wdlD-gn~~~~W~gvr~~~v~dlait~Dgk~vl~ 371 (519)
T KOG0293|consen 297 DVDTGDLRHLYPSG---LG-FSVSSCAWCPDGFRFVTGSPDRTIIMWDLD-GNILGNWEGVRDPKVHDLAITYDGKYVLL 371 (519)
T ss_pred cCCcchhhhhcccC---cC-CCcceeEEccCCceeEecCCCCcEEEecCC-cchhhcccccccceeEEEEEcCCCcEEEE
Confidence 99987654433322 11 223456899999999999999999999985 44455554433 458888887 4 48888
Q ss_pred EeCCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEECCCcEEEEeCCc--ceeeeecccceEEEE--Ee-
Q 008820 398 GSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDK--FMKSMQTHKGSVFAV--FL- 472 (552)
Q Consensus 398 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~~--~~~~~~~h~~~v~~v--~~- 472 (552)
.+.|..|++++..+......+..+ ..+.+ .++|.+++++++.-.+..+++||+.+ .++.+.||+..-.-+ +|
T Consensus 372 v~~d~~i~l~~~e~~~dr~lise~--~~its-~~iS~d~k~~LvnL~~qei~LWDl~e~~lv~kY~Ghkq~~fiIrSCFg 448 (519)
T KOG0293|consen 372 VTVDKKIRLYNREARVDRGLISEE--QPITS-FSISKDGKLALVNLQDQEIHLWDLEENKLVRKYFGHKQGHFIIRSCFG 448 (519)
T ss_pred Eecccceeeechhhhhhhcccccc--CceeE-EEEcCCCcEEEEEcccCeeEEeecchhhHHHHhhcccccceEEEeccC
Confidence 899999999999876655555443 33444 69999999999999999999999764 567788887654333 34
Q ss_pred --cCCEEEEEeCCCeEEEEecCCCeeeeeeccCCCcccCcceEEEEEeC---CeEEEEeCCCeEEEEEecC
Q 008820 473 --EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQ---GKLFVGCADRTVKIALCNR 538 (552)
Q Consensus 473 --~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~~---~~l~s~s~Dg~v~iw~~~~ 538 (552)
+..++++||+|+.|+||+..++++...+..+ ...|++++|+| ..+|+||.||+||||...+
T Consensus 449 g~~~~fiaSGSED~kvyIWhr~sgkll~~LsGH-----s~~vNcVswNP~~p~m~ASasDDgtIRIWg~~~ 514 (519)
T KOG0293|consen 449 GGNDKFIASGSEDSKVYIWHRISGKLLAVLSGH-----SKTVNCVSWNPADPEMFASASDDGTIRIWGPSD 514 (519)
T ss_pred CCCcceEEecCCCceEEEEEccCCceeEeecCC-----cceeeEEecCCCCHHHhhccCCCCeEEEecCCc
Confidence 6789999999999999999999888877664 67799999996 3599999999999999874
No 36
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=99.98 E-value=3.4e-29 Score=239.91 Aligned_cols=277 Identities=30% Similarity=0.458 Sum_probs=227.6
Q ss_pred EEeecCccceEEEEEc--CCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCC
Q 008820 246 KDLQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFS 323 (552)
Q Consensus 246 ~~l~~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~ 323 (552)
..+.+|.++|++++|+ ++++++++.||.|++|++.+++....+..|...+..+.|+|++ ..+++++.||.|++||+.
T Consensus 3 ~~~~~h~~~i~~~~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~~~~i~i~~~~ 81 (289)
T cd00200 3 RTLKGHTGGVTCVAFSPDGKLLATGSGDGTIKVWDLETGELLRTLKGHTGPVRDVAASADG-TYLASGSSDKTIRLWDLE 81 (289)
T ss_pred hHhcccCCCEEEEEEcCCCCEEEEeecCcEEEEEEeeCCCcEEEEecCCcceeEEEECCCC-CEEEEEcCCCeEEEEEcC
Confidence 4577999999999999 7999999999999999999998888899999999999999976 577899999999999998
Q ss_pred CCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEeC-C-EEEEEeCC
Q 008820 324 FPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVCN-G-VLYSGSRD 401 (552)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~-~-~l~s~~~d 401 (552)
.......+. .+.. ......+.++++++++++.||.|.+||+++++....+..|...+.++.|++ + ++++++.|
T Consensus 82 ~~~~~~~~~---~~~~--~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~ 156 (289)
T cd00200 82 TGECVRTLT---GHTS--YVSSVAFSPDGRILSSSSRDKTIKVWDVETGKCLTTLRGHTDWVNSVAFSPDGTFVASSSQD 156 (289)
T ss_pred cccceEEEe---ccCC--cEEEEEEcCCCCEEEEecCCCeEEEEECCCcEEEEEeccCCCcEEEEEEcCcCCEEEEEcCC
Confidence 653333222 2211 122335666667888888899999999999999999999999999999994 4 67777779
Q ss_pred CcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEECCCcEEEEeCC--cceeeeecccceEEEEEe--cCCEE
Q 008820 402 GTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRND--KFMKSMQTHKGSVFAVFL--EGKWL 477 (552)
Q Consensus 402 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~--~~~~~~~~h~~~v~~v~~--~~~~l 477 (552)
+.|++||+++++.+..+..+. ..+.. +.++++++.+++++.|+.|++||.+ +....+..|...+.++.+ ++.++
T Consensus 157 ~~i~i~d~~~~~~~~~~~~~~-~~i~~-~~~~~~~~~l~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 234 (289)
T cd00200 157 GTIKLWDLRTGKCVATLTGHT-GEVNS-VAFSPDGEKLLSSSSDGTIKLWDLSTGKCLGTLRGHENGVNSVAFSPDGYLL 234 (289)
T ss_pred CcEEEEEccccccceeEecCc-cccce-EEECCCcCEEEEecCCCcEEEEECCCCceecchhhcCCceEEEEEcCCCcEE
Confidence 999999999888888887553 34444 6899999999999999999999975 466677788889999887 56788
Q ss_pred EEEeCCCeEEEEecCCCeeeeeeccCCCcccCcceEEEEEeC--CeEEEEeCCCeEEEEE
Q 008820 478 FTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQ--GKLFVGCADRTVKIAL 535 (552)
Q Consensus 478 ~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~~--~~l~s~s~Dg~v~iw~ 535 (552)
++++.||.|++||+.+++....+.. +...+.+++|++ ..+++++.||.|++|+
T Consensus 235 ~~~~~~~~i~i~~~~~~~~~~~~~~-----~~~~i~~~~~~~~~~~l~~~~~d~~i~iw~ 289 (289)
T cd00200 235 ASGSEDGTIRVWDLRTGECVQTLSG-----HTNSVTSLAWSPDGKRLASGSADGTIRIWD 289 (289)
T ss_pred EEEcCCCcEEEEEcCCceeEEEccc-----cCCcEEEEEECCCCCEEEEecCCCeEEecC
Confidence 8888899999999987766555442 256799999996 5699999999999996
No 37
>KOG0296 consensus Angio-associated migratory cell protein (contains WD40 repeats) [Function unknown]
Probab=99.97 E-value=3.6e-29 Score=224.98 Aligned_cols=307 Identities=12% Similarity=0.145 Sum_probs=243.0
Q ss_pred ccccceeeecCcceEEEeeCCCeEEEEE---------eecCccceEEEEEc--CCEEEEEeCCCcEEEEeCCCCeEEEEE
Q 008820 220 ADIDQARAAGGVKDLVNGLSKGNVKFKD---------LQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTF 288 (552)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------l~~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~~~~~~~ 288 (552)
+.+.++...+..+.++++..+....+|+ +.||++.|+++.|+ |.+||||+.+|.|+||+..++.....+
T Consensus 65 ~svFavsl~P~~~l~aTGGgDD~AflW~~~~ge~~~eltgHKDSVt~~~FshdgtlLATGdmsG~v~v~~~stg~~~~~~ 144 (399)
T KOG0296|consen 65 DSVFAVSLHPNNNLVATGGGDDLAFLWDISTGEFAGELTGHKDSVTCCSFSHDGTLLATGDMSGKVLVFKVSTGGEQWKL 144 (399)
T ss_pred CceEEEEeCCCCceEEecCCCceEEEEEccCCcceeEecCCCCceEEEEEccCceEEEecCCCccEEEEEcccCceEEEe
Confidence 3455555555555555666555555554 78999999999999 999999999999999999999999988
Q ss_pred eCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEE
Q 008820 289 KGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWS 368 (552)
Q Consensus 289 ~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd 368 (552)
...-+.+.=+.|+| ...+|++|+.||.+.+|.+.+.. ..+.+.++. .....-.|.|+|+.+++|..||+|++||
T Consensus 145 ~~e~~dieWl~WHp-~a~illAG~~DGsvWmw~ip~~~---~~kv~~Gh~--~~ct~G~f~pdGKr~~tgy~dgti~~Wn 218 (399)
T KOG0296|consen 145 DQEVEDIEWLKWHP-RAHILLAGSTDGSVWMWQIPSQA---LCKVMSGHN--SPCTCGEFIPDGKRILTGYDDGTIIVWN 218 (399)
T ss_pred ecccCceEEEEecc-cccEEEeecCCCcEEEEECCCcc---eeeEecCCC--CCcccccccCCCceEEEEecCceEEEEe
Confidence 76677888899999 55688999999999999998653 333333333 2233457899999999999999999999
Q ss_pred CCCCceeEEecC-CCCCeEEEEEe--CCEEEEEeCCCcEEEEECCCCceeEEEecC-------CCCceEE--EEEEcCCC
Q 008820 369 LLDGTLSCTMSG-HKSAVSTLAVC--NGVLYSGSRDGTIRLWSLSDHSLLTVLEED-------SSGAVSS--VLSLTAVQ 436 (552)
Q Consensus 369 ~~~~~~~~~~~~-h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-------~~~~~~~--~~~~s~~~ 436 (552)
+.+++++.++.. ......++.++ +..++.|+.++.+++-+..+|+.+...... +.....+ .+.++..=
T Consensus 219 ~ktg~p~~~~~~~e~~~~~~~~~~~~~~~~~~g~~e~~~~~~~~~sgKVv~~~n~~~~~l~~~~e~~~esve~~~~ss~l 298 (399)
T KOG0296|consen 219 PKTGQPLHKITQAEGLELPCISLNLAGSTLTKGNSEGVACGVNNGSGKVVNCNNGTVPELKPSQEELDESVESIPSSSKL 298 (399)
T ss_pred cCCCceeEEecccccCcCCccccccccceeEeccCCccEEEEccccceEEEecCCCCccccccchhhhhhhhhccccccc
Confidence 999999998863 23456777777 558999999999999999999988776631 1111111 13445555
Q ss_pred CEEEEEECCCcEEEEeCCc-ceeeeecccceEEEEEecC-CEEEEEeCCCeEEEEecCCCeeeeeeccCCCcccCcceEE
Q 008820 437 HTLVVSHESGSIKVWRNDK-FMKSMQTHKGSVFAVFLEG-KWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITA 514 (552)
Q Consensus 437 ~~l~~g~~dg~i~iwd~~~-~~~~~~~h~~~v~~v~~~~-~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~ 514 (552)
.+.++|+-||+|.|||+.. ..+..-.|...|+.+.|.+ .+|++++.+|.|+.||.+++++...+..+ ...|.+
T Consensus 299 pL~A~G~vdG~i~iyD~a~~~~R~~c~he~~V~~l~w~~t~~l~t~c~~g~v~~wDaRtG~l~~~y~GH-----~~~Il~ 373 (399)
T KOG0296|consen 299 PLAACGSVDGTIAIYDLAASTLRHICEHEDGVTKLKWLNTDYLLTACANGKVRQWDARTGQLKFTYTGH-----QMGILD 373 (399)
T ss_pred chhhcccccceEEEEecccchhheeccCCCceEEEEEcCcchheeeccCceEEeeeccccceEEEEecC-----chheeE
Confidence 6889999999999999764 4555567899999999954 89999999999999999999998887764 667999
Q ss_pred EEEeC--CeEEEEeCCCeEEEEEec
Q 008820 515 LLYWQ--GKLFVGCADRTVKIALCN 537 (552)
Q Consensus 515 l~~~~--~~l~s~s~Dg~v~iw~~~ 537 (552)
++.++ ++++|+|.|++.+||+++
T Consensus 374 f~ls~~~~~vvT~s~D~~a~VF~v~ 398 (399)
T KOG0296|consen 374 FALSPQKRLVVTVSDDNTALVFEVP 398 (399)
T ss_pred EEEcCCCcEEEEecCCCeEEEEecC
Confidence 99996 459999999999999875
No 38
>KOG0291 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=99.97 E-value=1.4e-28 Score=240.06 Aligned_cols=311 Identities=20% Similarity=0.313 Sum_probs=245.1
Q ss_pred ccccceeeecCcceEEEeeCCCeEEEEEeec---------CccceEEEEEc--CCEEEEEeCC-CcEEEEeCCCCeEEEE
Q 008820 220 ADIDQARAAGGVKDLVNGLSKGNVKFKDLQG---------HRDCVTGLAVG--GGFLFSSSFD-KSIHVWSLKDFSHVHT 287 (552)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~---------H~~~V~~l~~s--~~~l~s~s~d-g~I~iwd~~~~~~~~~ 287 (552)
..+.++.+....+.++++...|...++.+.+ -+.+|..++|+ |+.+|.|+.. |.+-||++.+...+..
T Consensus 266 ~kvtaa~fH~~t~~lvvgFssG~f~LyelP~f~lih~LSis~~~I~t~~~N~tGDWiA~g~~klgQLlVweWqsEsYVlK 345 (893)
T KOG0291|consen 266 SKVTAAAFHKGTNLLVVGFSSGEFGLYELPDFNLIHSLSISDQKILTVSFNSTGDWIAFGCSKLGQLLVWEWQSESYVLK 345 (893)
T ss_pred cceeeeeccCCceEEEEEecCCeeEEEecCCceEEEEeecccceeeEEEecccCCEEEEcCCccceEEEEEeeccceeee
Confidence 5677888888899999999999887777644 35688899999 9999998765 8899999999999999
Q ss_pred EeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEE
Q 008820 288 FKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAW 367 (552)
Q Consensus 288 ~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iw 367 (552)
.++|...+++++++|+++ ++++|+.||.|++||..++- ++.++..|.. ......|+..++.+++.+-||+|+.|
T Consensus 346 QQgH~~~i~~l~YSpDgq-~iaTG~eDgKVKvWn~~Sgf---C~vTFteHts--~Vt~v~f~~~g~~llssSLDGtVRAw 419 (893)
T KOG0291|consen 346 QQGHSDRITSLAYSPDGQ-LIATGAEDGKVKVWNTQSGF---CFVTFTEHTS--GVTAVQFTARGNVLLSSSLDGTVRAW 419 (893)
T ss_pred ccccccceeeEEECCCCc-EEEeccCCCcEEEEeccCce---EEEEeccCCC--ceEEEEEEecCCEEEEeecCCeEEee
Confidence 999999999999999776 78999999999999998654 4444444443 22345777889999999999999999
Q ss_pred ECCCCceeEEecCCC-CCeEEEEEe--CCEEEEEeCCC-cEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEE
Q 008820 368 SLLDGTLSCTMSGHK-SAVSTLAVC--NGVLYSGSRDG-TIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSH 443 (552)
Q Consensus 368 d~~~~~~~~~~~~h~-~~v~~l~~~--~~~l~s~~~dg-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~ 443 (552)
|+...+..+++.... -...|++.. +..+.+|+.|. .|.+|++++|+.+-.+.+| .+++.+ ++|+|++..|++|+
T Consensus 420 DlkRYrNfRTft~P~p~QfscvavD~sGelV~AG~~d~F~IfvWS~qTGqllDiLsGH-EgPVs~-l~f~~~~~~LaS~S 497 (893)
T KOG0291|consen 420 DLKRYRNFRTFTSPEPIQFSCVAVDPSGELVCAGAQDSFEIFVWSVQTGQLLDILSGH-EGPVSG-LSFSPDGSLLASGS 497 (893)
T ss_pred eecccceeeeecCCCceeeeEEEEcCCCCEEEeeccceEEEEEEEeecCeeeehhcCC-CCccee-eEEccccCeEEecc
Confidence 999999999887533 345677776 44777777765 6999999999999999988 466665 69999999999999
Q ss_pred CCCcEEEEeCCc---ceeeeecccceEEEEEe--cCCEEEEEeCCCeEEEEecCCCeeeeeecc---------------C
Q 008820 444 ESGSIKVWRNDK---FMKSMQTHKGSVFAVFL--EGKWLFTGGWDKTVSVQELAGDEFEEDVIP---------------T 503 (552)
Q Consensus 444 ~dg~i~iwd~~~---~~~~~~~h~~~v~~v~~--~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~---------------~ 503 (552)
.|.+|++||.-. .+.++ .+...+..++| +|+.|++++-||.|.+||............ .
T Consensus 498 WDkTVRiW~if~s~~~vEtl-~i~sdvl~vsfrPdG~elaVaTldgqItf~d~~~~~q~~~IdgrkD~~~gR~~~D~~ta 576 (893)
T KOG0291|consen 498 WDKTVRIWDIFSSSGTVETL-EIRSDVLAVSFRPDGKELAVATLDGQITFFDIKEAVQVGSIDGRKDLSGGRKETDRITA 576 (893)
T ss_pred ccceEEEEEeeccCceeeeE-eeccceeEEEEcCCCCeEEEEEecceEEEEEhhhceeeccccchhhccccccccceeeh
Confidence 999999999432 33333 34556666655 899999999999999999875543321111 1
Q ss_pred CCcccCcceEEEEEe-C-CeEEEEeCCCeEEEEEecCC
Q 008820 504 GAIPCGSVITALLYW-Q-GKLFVGCADRTVKIALCNRQ 539 (552)
Q Consensus 504 ~~~~~~~~v~~l~~~-~-~~l~s~s~Dg~v~iw~~~~~ 539 (552)
.........+.++++ + +.+++|+....|+||++...
T Consensus 577 ~~sa~~K~Ftti~ySaDG~~IlAgG~sn~iCiY~v~~~ 614 (893)
T KOG0291|consen 577 ENSAKGKTFTTICYSADGKCILAGGESNSICIYDVPEG 614 (893)
T ss_pred hhcccCCceEEEEEcCCCCEEEecCCcccEEEEECchh
Confidence 111224568899999 4 45999999999999999843
No 39
>KOG0273 consensus Beta-transducin family (WD-40 repeat) protein [Chromatin structure and dynamics]
Probab=99.97 E-value=9.7e-29 Score=229.06 Aligned_cols=269 Identities=20% Similarity=0.304 Sum_probs=229.5
Q ss_pred CCCCCCccccceeeecCcceEEEeeCCCeEEEEEe--------ecCccceEEEEEc--CCEEEEEeCCCcEEEEeCCCCe
Q 008820 214 AENSDGADIDQARAAGGVKDLVNGLSKGNVKFKDL--------QGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFS 283 (552)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--------~~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~~ 283 (552)
...++...+.......++..++++..+|.+++|+. ..|+++|.++.|+ |.+|++++.|+++.+||..++.
T Consensus 230 ~s~~~nkdVT~L~Wn~~G~~LatG~~~G~~riw~~~G~l~~tl~~HkgPI~slKWnk~G~yilS~~vD~ttilwd~~~g~ 309 (524)
T KOG0273|consen 230 KSVPSNKDVTSLDWNNDGTLLATGSEDGEARIWNKDGNLISTLGQHKGPIFSLKWNKKGTYILSGGVDGTTILWDAHTGT 309 (524)
T ss_pred ccCCccCCcceEEecCCCCeEEEeecCcEEEEEecCchhhhhhhccCCceEEEEEcCCCCEEEeccCCccEEEEeccCce
Confidence 44455567889999999999999999999999985 4599999999999 9999999999999999999999
Q ss_pred EEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCc
Q 008820 284 HVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRT 363 (552)
Q Consensus 284 ~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~ 363 (552)
..+.+.-|..+-.+|.|..++ -+++++.|+.|+++.+.... +..++.+|++. .....+.|.+.+|+++|.|++
T Consensus 310 ~~q~f~~~s~~~lDVdW~~~~--~F~ts~td~~i~V~kv~~~~---P~~t~~GH~g~--V~alk~n~tg~LLaS~SdD~T 382 (524)
T KOG0273|consen 310 VKQQFEFHSAPALDVDWQSND--EFATSSTDGCIHVCKVGEDR---PVKTFIGHHGE--VNALKWNPTGSLLASCSDDGT 382 (524)
T ss_pred EEEeeeeccCCccceEEecCc--eEeecCCCceEEEEEecCCC---cceeeecccCc--eEEEEECCCCceEEEecCCCe
Confidence 999999999988899997544 57999999999999998554 44444444431 223456666889999999999
Q ss_pred EEEEECCCCceeEEecCCCCCeEEEEEeC-----------CEEEEEeCCCcEEEEECCCCceeEEEecCCCCceEEEEEE
Q 008820 364 IKAWSLLDGTLSCTMSGHKSAVSTLAVCN-----------GVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSL 432 (552)
Q Consensus 364 i~iwd~~~~~~~~~~~~h~~~v~~l~~~~-----------~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 432 (552)
++||..........+.+|...|..+.|++ ..+++++.|++|++||+..+.+++++..|. .++.. ++|
T Consensus 383 lkiWs~~~~~~~~~l~~Hskei~t~~wsp~g~v~~n~~~~~~l~sas~dstV~lwdv~~gv~i~~f~kH~-~pVys-vaf 460 (524)
T KOG0273|consen 383 LKIWSMGQSNSVHDLQAHSKEIYTIKWSPTGPVTSNPNMNLMLASASFDSTVKLWDVESGVPIHTLMKHQ-EPVYS-VAF 460 (524)
T ss_pred eEeeecCCCcchhhhhhhccceeeEeecCCCCccCCCcCCceEEEeecCCeEEEEEccCCceeEeeccCC-CceEE-EEe
Confidence 99999999999999999999999999971 179999999999999999999999997764 44555 799
Q ss_pred cCCCCEEEEEECCCcEEEEeCC--cceeeeecccceEEEEEe--cCCEEEEEeCCCeEEEEecC
Q 008820 433 TAVQHTLVVSHESGSIKVWRND--KFMKSMQTHKGSVFAVFL--EGKWLFTGGWDKTVSVQELA 492 (552)
Q Consensus 433 s~~~~~l~~g~~dg~i~iwd~~--~~~~~~~~h~~~v~~v~~--~~~~l~sgs~dg~i~iwd~~ 492 (552)
+|+|+++++|+.||.|.+|+.+ +..+.+.+ .+.|..+.| +|..|..+-.|+.+++.|++
T Consensus 461 S~~g~ylAsGs~dg~V~iws~~~~~l~~s~~~-~~~Ifel~Wn~~G~kl~~~~sd~~vcvldlr 523 (524)
T KOG0273|consen 461 SPNGRYLASGSLDGCVHIWSTKTGKLVKSYQG-TGGIFELCWNAAGDKLGACASDGSVCVLDLR 523 (524)
T ss_pred cCCCcEEEecCCCCeeEeccccchheeEeecC-CCeEEEEEEcCCCCEEEEEecCCCceEEEec
Confidence 9999999999999999999954 56666665 455888888 78999999999999999875
No 40
>KOG0292 consensus Vesicle coat complex COPI, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.97 E-value=1.3e-29 Score=250.76 Aligned_cols=282 Identities=19% Similarity=0.306 Sum_probs=233.7
Q ss_pred EeecCccceEEEEEc--CCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCC
Q 008820 247 DLQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSF 324 (552)
Q Consensus 247 ~l~~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~ 324 (552)
.|+..+..|.+++|+ ..+++++-..|.|++||..-+.++..|..|.++|..++|+|... ++++|+.|-.|++|+..+
T Consensus 4 kfEskSsRvKglsFHP~rPwILtslHsG~IQlWDYRM~tli~rFdeHdGpVRgv~FH~~qp-lFVSGGDDykIkVWnYk~ 82 (1202)
T KOG0292|consen 4 KFESKSSRVKGLSFHPKRPWILTSLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVDFHPTQP-LFVSGGDDYKIKVWNYKT 82 (1202)
T ss_pred hhhcccccccceecCCCCCEEEEeecCceeeeehhhhhhHHhhhhccCCccceeeecCCCC-eEEecCCccEEEEEeccc
Confidence 355667789999999 78999999999999999999999999999999999999999654 889999999999999986
Q ss_pred CCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe--CCEEEEEeCCC
Q 008820 325 PLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC--NGVLYSGSRDG 402 (552)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg 402 (552)
.+ ++.++.+|-+. .....|++.--.|+++|.|.+|+||+..+++++..+.||...|.|..|+ ++.++++|.|.
T Consensus 83 rr---clftL~GHlDY--VRt~~FHheyPWIlSASDDQTIrIWNwqsr~~iavltGHnHYVMcAqFhptEDlIVSaSLDQ 157 (1202)
T KOG0292|consen 83 RR---CLFTLLGHLDY--VRTVFFHHEYPWILSASDDQTIRIWNWQSRKCIAVLTGHNHYVMCAQFHPTEDLIVSASLDQ 157 (1202)
T ss_pred ce---ehhhhccccce--eEEeeccCCCceEEEccCCCeEEEEeccCCceEEEEecCceEEEeeccCCccceEEEecccc
Confidence 54 44444455443 2334677777799999999999999999999999999999999999999 45999999999
Q ss_pred cEEEEECCCCc-----------------------------eeEEEecCCCCceEEEEEEcCCCCEEEEEECCCcEEEEeC
Q 008820 403 TIRLWSLSDHS-----------------------------LLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRN 453 (552)
Q Consensus 403 ~i~iwd~~~~~-----------------------------~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~ 453 (552)
+||+||+..-+ ..+.+.+|..+.-. ++|.|.-.++++|+.|..|++|..
T Consensus 158 TVRVWDisGLRkk~~~pg~~e~~~~~~~~~~dLfg~~DaVVK~VLEGHDRGVNw--aAfhpTlpliVSG~DDRqVKlWrm 235 (1202)
T KOG0292|consen 158 TVRVWDISGLRKKNKAPGSLEDQMRGQQGNSDLFGQTDAVVKHVLEGHDRGVNW--AAFHPTLPLIVSGADDRQVKLWRM 235 (1202)
T ss_pred eEEEEeecchhccCCCCCCchhhhhccccchhhcCCcCeeeeeeecccccccce--EEecCCcceEEecCCcceeeEEEe
Confidence 99999985211 11233444333333 589999999999999999999986
Q ss_pred Cc----ceeeeecccceEEEEEecC--CEEEEEeCCCeEEEEecCCCeeeeeeccCCCcccCcceEEEEEeCCe-EEEEe
Q 008820 454 DK----FMKSMQTHKGSVFAVFLEG--KWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQGK-LFVGC 526 (552)
Q Consensus 454 ~~----~~~~~~~h~~~v~~v~~~~--~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~-l~s~s 526 (552)
.. .+.+..+|.+.|.++-|++ ..++|.|+|++|++||+...+....+... ......++.+|.. |+.++
T Consensus 236 netKaWEvDtcrgH~nnVssvlfhp~q~lIlSnsEDksirVwDm~kRt~v~tfrre-----ndRFW~laahP~lNLfAAg 310 (1202)
T KOG0292|consen 236 NETKAWEVDTCRGHYNNVSSVLFHPHQDLILSNSEDKSIRVWDMTKRTSVQTFRRE-----NDRFWILAAHPELNLFAAG 310 (1202)
T ss_pred ccccceeehhhhcccCCcceEEecCccceeEecCCCccEEEEecccccceeeeecc-----CCeEEEEEecCCcceeeee
Confidence 53 4557789999999998854 89999999999999999988777776554 5678888999866 88888
Q ss_pred CCCeEEEEEecCCcc
Q 008820 527 ADRTVKIALCNRQIP 541 (552)
Q Consensus 527 ~Dg~v~iw~~~~~~~ 541 (552)
.|+-+.+|.+++..+
T Consensus 311 HDsGm~VFkleRErp 325 (1202)
T KOG0292|consen 311 HDSGMIVFKLERERP 325 (1202)
T ss_pred cCCceEEEEEcccCc
Confidence 899999999985444
No 41
>KOG1407 consensus WD40 repeat protein [Function unknown]
Probab=99.97 E-value=2.8e-29 Score=215.93 Aligned_cols=268 Identities=16% Similarity=0.278 Sum_probs=225.7
Q ss_pred EEeecCccceEEEEEc--CCEEEEEeCCCcEEEEeCCCCeEEE--EEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEe
Q 008820 246 KDLQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVH--TFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWS 321 (552)
Q Consensus 246 ~~l~~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~~~~~--~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd 321 (552)
+++++|...|.+++|+ |..|++|+.|+++++|+++..+... ...+|.+.|-.++|.|....++++++.|.+|++||
T Consensus 14 r~~~~~~~~v~Sv~wn~~g~~lasgs~dktv~v~n~e~~r~~~~~~~~gh~~svdql~w~~~~~d~~atas~dk~ir~wd 93 (313)
T KOG1407|consen 14 RELQGHVQKVHSVAWNCDGTKLASGSFDKTVSVWNLERDRFRKELVYRGHTDSVDQLCWDPKHPDLFATASGDKTIRIWD 93 (313)
T ss_pred HHhhhhhhcceEEEEcccCceeeecccCCceEEEEecchhhhhhhcccCCCcchhhheeCCCCCcceEEecCCceEEEEE
Confidence 5678999999999999 9999999999999999998775543 34689999999999999999999999999999999
Q ss_pred CCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe--CCEEEEEe
Q 008820 322 FSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC--NGVLYSGS 399 (552)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~ 399 (552)
++.+++...+..-.+. -...++|+|+++++++.|..|...|.++.+.....+ ....+.-++|+ +++++...
T Consensus 94 ~r~~k~~~~i~~~~en------i~i~wsp~g~~~~~~~kdD~it~id~r~~~~~~~~~-~~~e~ne~~w~~~nd~Fflt~ 166 (313)
T KOG1407|consen 94 IRSGKCTARIETKGEN------INITWSPDGEYIAVGNKDDRITFIDARTYKIVNEEQ-FKFEVNEISWNNSNDLFFLTN 166 (313)
T ss_pred eccCcEEEEeeccCcc------eEEEEcCCCCEEEEecCcccEEEEEecccceeehhc-ccceeeeeeecCCCCEEEEec
Confidence 9987655444332221 235789999999999999999999999888877665 45567888888 45777777
Q ss_pred CCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEECCCcEEEEeCCc--ceeeeecccceEEEEEe--cCC
Q 008820 400 RDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDK--FMKSMQTHKGSVFAVFL--EGK 475 (552)
Q Consensus 400 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~~--~~~~~~~h~~~v~~v~~--~~~ 475 (552)
..|+|.|......+++..++.|. ....+ +.|+|+|+++++|+.|..+.+||..+ +++.+..+.-+|..++| ||+
T Consensus 167 GlG~v~ILsypsLkpv~si~AH~-snCic-I~f~p~GryfA~GsADAlvSLWD~~ELiC~R~isRldwpVRTlSFS~dg~ 244 (313)
T KOG1407|consen 167 GLGCVEILSYPSLKPVQSIKAHP-SNCIC-IEFDPDGRYFATGSADALVSLWDVDELICERCISRLDWPVRTLSFSHDGR 244 (313)
T ss_pred CCceEEEEeccccccccccccCC-cceEE-EEECCCCceEeeccccceeeccChhHhhhheeeccccCceEEEEeccCcc
Confidence 78999999999999999999885 34444 69999999999999999999999887 56788889999999998 999
Q ss_pred EEEEEeCCCeEEEEecCCCeeeeeeccCCCcccCcceEEEEEeCCe--EEEEeCC
Q 008820 476 WLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQGK--LFVGCAD 528 (552)
Q Consensus 476 ~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~--l~s~s~D 528 (552)
+||+||+|-.|-|=+++++....... +.++-..++|+|.+ |+-++.|
T Consensus 245 ~lASaSEDh~IDIA~vetGd~~~eI~------~~~~t~tVAWHPk~~LLAyA~dd 293 (313)
T KOG1407|consen 245 MLASASEDHFIDIAEVETGDRVWEIP------CEGPTFTVAWHPKRPLLAYACDD 293 (313)
T ss_pred eeeccCccceEEeEecccCCeEEEee------ccCCceeEEecCCCceeeEEecC
Confidence 99999999999999999987766543 47778999999976 5555554
No 42
>KOG0645 consensus WD40 repeat protein [General function prediction only]
Probab=99.97 E-value=2e-28 Score=211.85 Aligned_cols=260 Identities=23% Similarity=0.306 Sum_probs=210.2
Q ss_pred ccceeeecC-cceEEEeeCCCeEEEEEee-------------cCccceEEEEEc--CCEEEEEeCCCcEEEEeCC--CCe
Q 008820 222 IDQARAAGG-VKDLVNGLSKGNVKFKDLQ-------------GHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLK--DFS 283 (552)
Q Consensus 222 ~~~~~~~~~-~~~~~~~~~~~~~~~~~l~-------------~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~--~~~ 283 (552)
+..++..+. +..++++..+..+++|... +|+..|++++|+ |++|++||.|.++.||.-. +.+
T Consensus 17 ~W~~awhp~~g~ilAscg~Dk~vriw~~~~~~s~~ck~vld~~hkrsVRsvAwsp~g~~La~aSFD~t~~Iw~k~~~efe 96 (312)
T KOG0645|consen 17 VWSVAWHPGKGVILASCGTDKAVRIWSTSSGDSWTCKTVLDDGHKRSVRSVAWSPHGRYLASASFDATVVIWKKEDGEFE 96 (312)
T ss_pred EEEEEeccCCceEEEeecCCceEEEEecCCCCcEEEEEeccccchheeeeeeecCCCcEEEEeeccceEEEeecCCCcee
Confidence 555666666 6678888889999988865 499999999998 9999999999999999755 457
Q ss_pred EEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCc
Q 008820 284 HVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRT 363 (552)
Q Consensus 284 ~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~ 363 (552)
++.++.||...|.+++|++++. +||+|+.|+.|-+|.+...........+..|.... ....++|...+|++++.|++
T Consensus 97 cv~~lEGHEnEVK~Vaws~sG~-~LATCSRDKSVWiWe~deddEfec~aVL~~HtqDV--K~V~WHPt~dlL~S~SYDnT 173 (312)
T KOG0645|consen 97 CVATLEGHENEVKCVAWSASGN-YLATCSRDKSVWIWEIDEDDEFECIAVLQEHTQDV--KHVIWHPTEDLLFSCSYDNT 173 (312)
T ss_pred EEeeeeccccceeEEEEcCCCC-EEEEeeCCCeEEEEEecCCCcEEEEeeeccccccc--cEEEEcCCcceeEEeccCCe
Confidence 8999999999999999999665 88999999999999999776666666666655422 23467787789999999999
Q ss_pred EEEEECC---CCceeEEecCCCCCeEEEEEe--CCEEEEEeCCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCE
Q 008820 364 IKAWSLL---DGTLSCTMSGHKSAVSTLAVC--NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHT 438 (552)
Q Consensus 364 i~iwd~~---~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ 438 (552)
|++|+-. .-.+++++.+|...|.+++|+ +..+++++.|++++||-..+ .+...+...... +++. ...
T Consensus 174 Ik~~~~~~dddW~c~~tl~g~~~TVW~~~F~~~G~rl~s~sdD~tv~Iw~~~~-----~~~~~~sr~~Y~-v~W~--~~~ 245 (312)
T KOG0645|consen 174 IKVYRDEDDDDWECVQTLDGHENTVWSLAFDNIGSRLVSCSDDGTVSIWRLYT-----DLSGMHSRALYD-VPWD--NGV 245 (312)
T ss_pred EEEEeecCCCCeeEEEEecCccceEEEEEecCCCceEEEecCCcceEeeeecc-----CcchhcccceEe-eeec--ccc
Confidence 9999876 336899999999999999999 44999999999999998663 233333444554 4565 558
Q ss_pred EEEEECCCcEEEEeCCc----c-----eeeeecccceEEEEEec---CCEEEEEeCCCeEEEEecC
Q 008820 439 LVVSHESGSIKVWRNDK----F-----MKSMQTHKGSVFAVFLE---GKWLFTGGWDKTVSVQELA 492 (552)
Q Consensus 439 l~~g~~dg~i~iwd~~~----~-----~~~~~~h~~~v~~v~~~---~~~l~sgs~dg~i~iwd~~ 492 (552)
|++++.|+.|++|.... + .+.-..|...|+++.|+ .++|++|+.||.|++|.+.
T Consensus 246 IaS~ggD~~i~lf~~s~~~d~p~~~l~~~~~~aHe~dVNsV~w~p~~~~~L~s~~DDG~v~~W~l~ 311 (312)
T KOG0645|consen 246 IASGGGDDAIRLFKESDSPDEPSWNLLAKKEGAHEVDVNSVQWNPKVSNRLASGGDDGIVNFWELE 311 (312)
T ss_pred eEeccCCCEEEEEEecCCCCCchHHHHHhhhcccccccceEEEcCCCCCceeecCCCceEEEEEec
Confidence 99999999999996321 1 12335689999999983 5799999999999999874
No 43
>KOG0274 consensus Cdc4 and related F-box and WD-40 proteins [General function prediction only]
Probab=99.97 E-value=3.5e-29 Score=252.08 Aligned_cols=239 Identities=29% Similarity=0.420 Sum_probs=210.3
Q ss_pred eecCccceEEEEEc--CCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCC
Q 008820 248 LQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFP 325 (552)
Q Consensus 248 l~~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~ 325 (552)
+.||.+.|+++++. ++++++|+.|.++++||..+|.+.+++.+|.+.|.++.. .+.++++|+.|.+|++|+++++
T Consensus 245 l~GH~g~V~~l~~~~~~~~lvsgS~D~t~rvWd~~sg~C~~~l~gh~stv~~~~~---~~~~~~sgs~D~tVkVW~v~n~ 321 (537)
T KOG0274|consen 245 LVGHFGGVWGLAFPSGGDKLVSGSTDKTERVWDCSTGECTHSLQGHTSSVRCLTI---DPFLLVSGSRDNTVKVWDVTNG 321 (537)
T ss_pred ccCCCCCceeEEEecCCCEEEEEecCCcEEeEecCCCcEEEEecCCCceEEEEEc---cCceEeeccCCceEEEEeccCc
Confidence 89999999999999 999999999999999999999999999999999999987 4557889999999999999976
Q ss_pred CCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEeC-CEEEEEeCCCcE
Q 008820 326 LGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVCN-GVLYSGSRDGTI 404 (552)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~-~~l~s~~~dg~i 404 (552)
.....+.. +...+.++..++.++++|+.|++|++||+.++++++++.+|...|.++.+.. +.+++|+.|++|
T Consensus 322 ~~l~l~~~-------h~~~V~~v~~~~~~lvsgs~d~~v~VW~~~~~~cl~sl~gH~~~V~sl~~~~~~~~~Sgs~D~~I 394 (537)
T KOG0274|consen 322 ACLNLLRG-------HTGPVNCVQLDEPLLVSGSYDGTVKVWDPRTGKCLKSLSGHTGRVYSLIVDSENRLLSGSLDTTI 394 (537)
T ss_pred ceEEEecc-------ccccEEEEEecCCEEEEEecCceEEEEEhhhceeeeeecCCcceEEEEEecCcceEEeeeeccce
Confidence 54444433 3335778888899999999999999999999999999999999999999987 899999999999
Q ss_pred EEEECCCC-ceeEEEecCCCCceEEEEEEcCCCCEEEEEECCCcEEEEeC--Ccceeeeec-ccceEEEEEecCCEEEEE
Q 008820 405 RLWSLSDH-SLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRN--DKFMKSMQT-HKGSVFAVFLEGKWLFTG 480 (552)
Q Consensus 405 ~iwd~~~~-~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~--~~~~~~~~~-h~~~v~~v~~~~~~l~sg 480 (552)
++||+++. +++.++..+.. .+ ..+...+++|++++.|++|++||. +++.+.+.+ |...|.++.+....++++
T Consensus 395 kvWdl~~~~~c~~tl~~h~~-~v---~~l~~~~~~Lvs~~aD~~Ik~WD~~~~~~~~~~~~~~~~~v~~l~~~~~~il~s 470 (537)
T KOG0274|consen 395 KVWDLRTKRKCIHTLQGHTS-LV---SSLLLRDNFLVSSSADGTIKLWDAEEGECLRTLEGRHVGGVSALALGKEEILCS 470 (537)
T ss_pred EeecCCchhhhhhhhcCCcc-cc---cccccccceeEeccccccEEEeecccCceeeeeccCCcccEEEeecCcceEEEE
Confidence 99999999 89999987743 22 345566889999999999999984 467888888 778999988887889999
Q ss_pred eCCCeEEEEecCCCeeeeee
Q 008820 481 GWDKTVSVQELAGDEFEEDV 500 (552)
Q Consensus 481 s~dg~i~iwd~~~~~~~~~~ 500 (552)
+.||++++||++++......
T Consensus 471 ~~~~~~~l~dl~~~~~~~~l 490 (537)
T KOG0274|consen 471 SDDGSVKLWDLRSGTLIRTL 490 (537)
T ss_pred ecCCeeEEEecccCchhhhh
Confidence 99999999999998776654
No 44
>KOG0276 consensus Vesicle coat complex COPI, beta' subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.97 E-value=1.5e-28 Score=234.92 Aligned_cols=259 Identities=19% Similarity=0.282 Sum_probs=216.4
Q ss_pred ccceeeecCcceEEEeeCCCeEEEEEee---------cCccceEEEEEc--CCEEEEEeCCCcEEEEeCCCCeEEEEEeC
Q 008820 222 IDQARAAGGVKDLVNGLSKGNVKFKDLQ---------GHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKG 290 (552)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~---------~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~~~~~~~~~ 290 (552)
+.++.+.+...-++.+..+|.+++|+++ -..-+|++..|- .+++++|+.|..||||++++++.++.|..
T Consensus 16 VKsVd~HPtePw~la~LynG~V~IWnyetqtmVksfeV~~~PvRa~kfiaRknWiv~GsDD~~IrVfnynt~ekV~~FeA 95 (794)
T KOG0276|consen 16 VKSVDFHPTEPWILAALYNGDVQIWNYETQTMVKSFEVSEVPVRAAKFIARKNWIVTGSDDMQIRVFNYNTGEKVKTFEA 95 (794)
T ss_pred eeeeecCCCCceEEEeeecCeeEEEecccceeeeeeeecccchhhheeeeccceEEEecCCceEEEEecccceeeEEeec
Confidence 6667777777888888999999999854 345688888887 88999999999999999999999999999
Q ss_pred CCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCccccccccCCCceeeeEEEEee-CCCEEEEeeCCCcEEEEEC
Q 008820 291 HDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTT-SGRYLYTGSGDRTIKAWSL 369 (552)
Q Consensus 291 h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~sgs~dg~i~iwd~ 369 (552)
|.+.|.+++.+|..+ +++++|.|-+|++||.+.. ....+.+.+|.. ..-..+|.| |.+.+++++-|++|++|.+
T Consensus 96 H~DyIR~iavHPt~P-~vLtsSDDm~iKlW~we~~--wa~~qtfeGH~H--yVMqv~fnPkD~ntFaS~sLDrTVKVWsl 170 (794)
T KOG0276|consen 96 HSDYIRSIAVHPTLP-YVLTSSDDMTIKLWDWENE--WACEQTFEGHEH--YVMQVAFNPKDPNTFASASLDRTVKVWSL 170 (794)
T ss_pred cccceeeeeecCCCC-eEEecCCccEEEEeeccCc--eeeeeEEcCcce--EEEEEEecCCCccceeeeeccccEEEEEc
Confidence 999999999999665 7799999999999999843 345556666653 333346666 5669999999999999999
Q ss_pred CCCceeEEecCCCCCeEEEEEe-CC---EEEEEeCCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEECC
Q 008820 370 LDGTLSCTMSGHKSAVSTLAVC-NG---VLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHES 445 (552)
Q Consensus 370 ~~~~~~~~~~~h~~~v~~l~~~-~~---~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~d 445 (552)
.+..+..++.+|...|+|+.+. ++ +|++|+.|.+|++||.++..+++++.+|.. .+.. .+|.|.-.++++|++|
T Consensus 171 gs~~~nfTl~gHekGVN~Vdyy~~gdkpylIsgaDD~tiKvWDyQtk~CV~TLeGHt~-Nvs~-v~fhp~lpiiisgsED 248 (794)
T KOG0276|consen 171 GSPHPNFTLEGHEKGVNCVDYYTGGDKPYLISGADDLTIKVWDYQTKSCVQTLEGHTN-NVSF-VFFHPELPIIISGSED 248 (794)
T ss_pred CCCCCceeeeccccCcceEEeccCCCcceEEecCCCceEEEeecchHHHHHHhhcccc-cceE-EEecCCCcEEEEecCC
Confidence 9999999999999999999998 33 999999999999999999999999998854 4444 6899999999999999
Q ss_pred CcEEEEeCCc--ceeeeecccceEEEEEe--cCCEEEEEeCCCeEE
Q 008820 446 GSIKVWRNDK--FMKSMQTHKGSVFAVFL--EGKWLFTGGWDKTVS 487 (552)
Q Consensus 446 g~i~iwd~~~--~~~~~~~h~~~v~~v~~--~~~~l~sgs~dg~i~ 487 (552)
|+++||+..+ ...++...-..++|+.. .++.++.|..+|.|.
T Consensus 249 GTvriWhs~Ty~lE~tLn~gleRvW~I~~~k~~~~i~vG~Deg~i~ 294 (794)
T KOG0276|consen 249 GTVRIWNSKTYKLEKTLNYGLERVWCIAAHKGDGKIAVGFDEGSVT 294 (794)
T ss_pred ccEEEecCcceehhhhhhcCCceEEEEeecCCCCeEEEeccCCcEE
Confidence 9999998653 55566666678888874 556677777666654
No 45
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.97 E-value=5.5e-28 Score=262.85 Aligned_cols=266 Identities=20% Similarity=0.307 Sum_probs=215.6
Q ss_pred CCccccceeeecCcceEEEeeCCCeEEEEEee----------------cCccceEEEEEc---CCEEEEEeCCCcEEEEe
Q 008820 218 DGADIDQARAAGGVKDLVNGLSKGNVKFKDLQ----------------GHRDCVTGLAVG---GGFLFSSSFDKSIHVWS 278 (552)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~----------------~H~~~V~~l~~s---~~~l~s~s~dg~I~iwd 278 (552)
+...+..+.+++++..++++..++.+++|++. .+...|.+++|+ +.+|++++.||+|++||
T Consensus 482 ~~~~V~~i~fs~dg~~latgg~D~~I~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~las~~~Dg~v~lWd 561 (793)
T PLN00181 482 SSNLVCAIGFDRDGEFFATAGVNKKIKIFECESIIKDGRDIHYPVVELASRSKLSGICWNSYIKSQVASSNFEGVVQVWD 561 (793)
T ss_pred CCCcEEEEEECCCCCEEEEEeCCCEEEEEECCcccccccccccceEEecccCceeeEEeccCCCCEEEEEeCCCeEEEEE
Confidence 34567888999999999999999999999853 134578899997 68999999999999999
Q ss_pred CCCCeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCccccccccCCCceeeeEEEE-eeCCCEEEE
Q 008820 279 LKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHAL-TTSGRYLYT 357 (552)
Q Consensus 279 ~~~~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~s 357 (552)
+.+++.+..+.+|.+.|++++|+|.++.+|++|+.||+|++||+.++.....+. .+. ... ...+ ++++.++++
T Consensus 562 ~~~~~~~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~~~~~~~---~~~--~v~-~v~~~~~~g~~lat 635 (793)
T PLN00181 562 VARSQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTIK---TKA--NIC-CVQFPSESGRSLAF 635 (793)
T ss_pred CCCCeEEEEecCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCcEEEEEe---cCC--CeE-EEEEeCCCCCEEEE
Confidence 999999999999999999999998777799999999999999998654332222 111 122 2234 456889999
Q ss_pred eeCCCcEEEEECCCCc-eeEEecCCCCCeEEEEEe-CCEEEEEeCCCcEEEEECCCC------ceeEEEecCCCCceEEE
Q 008820 358 GSGDRTIKAWSLLDGT-LSCTMSGHKSAVSTLAVC-NGVLYSGSRDGTIRLWSLSDH------SLLTVLEEDSSGAVSSV 429 (552)
Q Consensus 358 gs~dg~i~iwd~~~~~-~~~~~~~h~~~v~~l~~~-~~~l~s~~~dg~i~iwd~~~~------~~~~~~~~~~~~~~~~~ 429 (552)
|+.||.|++||+++.+ .+..+.+|...|.++.|. ++.+++++.|++|++||++.+ ..+..+..+. ..+. .
T Consensus 636 gs~dg~I~iwD~~~~~~~~~~~~~h~~~V~~v~f~~~~~lvs~s~D~~ikiWd~~~~~~~~~~~~l~~~~gh~-~~i~-~ 713 (793)
T PLN00181 636 GSADHKVYYYDLRNPKLPLCTMIGHSKTVSYVRFVDSSTLVSSSTDNTLKLWDLSMSISGINETPLHSFMGHT-NVKN-F 713 (793)
T ss_pred EeCCCeEEEEECCCCCccceEecCCCCCEEEEEEeCCCEEEEEECCCEEEEEeCCCCccccCCcceEEEcCCC-CCee-E
Confidence 9999999999998765 567888999999999998 559999999999999999753 4566776653 3333 3
Q ss_pred EEEcCCCCEEEEEECCCcEEEEeCCcc--eee-------------eecccceEEEEEe--cCCEEEEEeCCCeEEEEec
Q 008820 430 LSLTAVQHTLVVSHESGSIKVWRNDKF--MKS-------------MQTHKGSVFAVFL--EGKWLFTGGWDKTVSVQEL 491 (552)
Q Consensus 430 ~~~s~~~~~l~~g~~dg~i~iwd~~~~--~~~-------------~~~h~~~v~~v~~--~~~~l~sgs~dg~i~iwd~ 491 (552)
+++++++.+|++|+.|+.|++|+.... ... ...|...|.++.| ++..|++|+.||.|++|++
T Consensus 714 v~~s~~~~~lasgs~D~~v~iw~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~V~~v~ws~~~~~lva~~~dG~I~i~~~ 792 (793)
T PLN00181 714 VGLSVSDGYIATGSETNEVFVYHKAFPMPVLSYKFKTIDPVSGLEVDDASQFISSVCWRGQSSTLVAANSTGNIKILEM 792 (793)
T ss_pred EEEcCCCCEEEEEeCCCEEEEEECCCCCceEEEecccCCcccccccCCCCcEEEEEEEcCCCCeEEEecCCCcEEEEec
Confidence 689999999999999999999995422 111 1235567888887 7889999999999999996
No 46
>KOG0268 consensus Sof1-like rRNA processing protein (contains WD40 repeats) [RNA processing and modification]
Probab=99.97 E-value=2.8e-30 Score=231.74 Aligned_cols=274 Identities=19% Similarity=0.272 Sum_probs=221.4
Q ss_pred EEEeecCccceEEEEEc---CCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEe
Q 008820 245 FKDLQGHRDCVTGLAVG---GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWS 321 (552)
Q Consensus 245 ~~~l~~H~~~V~~l~~s---~~~l~s~s~dg~I~iwd~~~~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd 321 (552)
+-.|.||.+.|.|++=+ -..++||+.||.|+|||+.+..+..+++.|.+.|..+++.. ..+++++.|.+|+.|.
T Consensus 59 v~~L~gHrdGV~~lakhp~~ls~~aSGs~DG~VkiWnlsqR~~~~~f~AH~G~V~Gi~v~~---~~~~tvgdDKtvK~wk 135 (433)
T KOG0268|consen 59 VGSLDGHRDGVSCLAKHPNKLSTVASGSCDGEVKIWNLSQRECIRTFKAHEGLVRGICVTQ---TSFFTVGDDKTVKQWK 135 (433)
T ss_pred hhhccccccccchhhcCcchhhhhhccccCceEEEEehhhhhhhheeecccCceeeEEecc---cceEEecCCcceeeee
Confidence 44578999999999998 36799999999999999999999999999999999999965 4578999999999999
Q ss_pred CCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe---CCEEEEE
Q 008820 322 FSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC---NGVLYSG 398 (552)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~---~~~l~s~ 398 (552)
++.+ +...+.+.... ..+ .....++.++|++. .|.|||.+...++..+.--...|.++.|+ .+.|++|
T Consensus 136 ~~~~----p~~tilg~s~~--~gI-dh~~~~~~FaTcGe--~i~IWD~~R~~Pv~smswG~Dti~svkfNpvETsILas~ 206 (433)
T KOG0268|consen 136 IDGP----PLHTILGKSVY--LGI-DHHRKNSVFATCGE--QIDIWDEQRDNPVSSMSWGADSISSVKFNPVETSILASC 206 (433)
T ss_pred ccCC----cceeeeccccc--ccc-ccccccccccccCc--eeeecccccCCccceeecCCCceeEEecCCCcchheeee
Confidence 8753 33332222110 011 22334567888876 59999999999999998888899999999 3488899
Q ss_pred eCCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEECCCcEEEEeCC---cceeeeecccceEEEEEe--c
Q 008820 399 SRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRND---KFMKSMQTHKGSVFAVFL--E 473 (552)
Q Consensus 399 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~---~~~~~~~~h~~~v~~v~~--~ 473 (552)
+.|+.|.+||++++.+++.+..... +..++|+|.+-.+++|++|..++.||++ .++....+|.+.|.++.| .
T Consensus 207 ~sDrsIvLyD~R~~~Pl~KVi~~mR---TN~IswnPeafnF~~a~ED~nlY~~DmR~l~~p~~v~~dhvsAV~dVdfspt 283 (433)
T KOG0268|consen 207 ASDRSIVLYDLRQASPLKKVILTMR---TNTICWNPEAFNFVAANEDHNLYTYDMRNLSRPLNVHKDHVSAVMDVDFSPT 283 (433)
T ss_pred ccCCceEEEecccCCccceeeeecc---ccceecCccccceeeccccccceehhhhhhcccchhhcccceeEEEeccCCC
Confidence 9999999999999999887765432 2236999988889999999999999966 567778889999999887 8
Q ss_pred CCEEEEEeCCCeEEEEecCCCeeeeeeccCCCcccCcceEEEEEe-C-CeEEEEeCCCeEEEEEec
Q 008820 474 GKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYW-Q-GKLFVGCADRTVKIALCN 537 (552)
Q Consensus 474 ~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~-~-~~l~s~s~Dg~v~iw~~~ 537 (552)
|+-+++||.|.+|+||.++.+......... . ...|.++.|+ + .++++||.|+.|++|..+
T Consensus 284 G~EfvsgsyDksIRIf~~~~~~SRdiYhtk-R---Mq~V~~Vk~S~Dskyi~SGSdd~nvRlWka~ 345 (433)
T KOG0268|consen 284 GQEFVSGSYDKSIRIFPVNHGHSRDIYHTK-R---MQHVFCVKYSMDSKYIISGSDDGNVRLWKAK 345 (433)
T ss_pred cchhccccccceEEEeecCCCcchhhhhHh-h---hheeeEEEEeccccEEEecCCCcceeeeecc
Confidence 999999999999999999876544332221 1 4459999999 4 459999999999999876
No 47
>KOG0276 consensus Vesicle coat complex COPI, beta' subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.97 E-value=6.7e-29 Score=237.35 Aligned_cols=274 Identities=21% Similarity=0.337 Sum_probs=228.7
Q ss_pred EeecCccceEEEEEc--CCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCC
Q 008820 247 DLQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSF 324 (552)
Q Consensus 247 ~l~~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~ 324 (552)
++..|++.|.++.++ ...++++-.+|.|.|||.++...++++....-+|.+..|.+ ..+.+++|+.|..|++|+.++
T Consensus 8 k~~~rSdRVKsVd~HPtePw~la~LynG~V~IWnyetqtmVksfeV~~~PvRa~kfia-RknWiv~GsDD~~IrVfnynt 86 (794)
T KOG0276|consen 8 KFQSRSDRVKSVDFHPTEPWILAALYNGDVQIWNYETQTMVKSFEVSEVPVRAAKFIA-RKNWIVTGSDDMQIRVFNYNT 86 (794)
T ss_pred HhhccCCceeeeecCCCCceEEEeeecCeeEEEecccceeeeeeeecccchhhheeee-ccceEEEecCCceEEEEeccc
Confidence 456699999999999 89999999999999999999999999999999999999988 455889999999999999998
Q ss_pred CCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCC-ceeEEecCCCCCeEEEEEe---CCEEEEEeC
Q 008820 325 PLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDG-TLSCTMSGHKSAVSTLAVC---NGVLYSGSR 400 (552)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~-~~~~~~~~h~~~v~~l~~~---~~~l~s~~~ 400 (552)
......+ ..|.+. ....+++|..-+++++|.|-+|++||.+.. .+.+++.+|...|.+++|+ ++.++++|.
T Consensus 87 ~ekV~~F---eAH~Dy--IR~iavHPt~P~vLtsSDDm~iKlW~we~~wa~~qtfeGH~HyVMqv~fnPkD~ntFaS~sL 161 (794)
T KOG0276|consen 87 GEKVKTF---EAHSDY--IRSIAVHPTLPYVLTSSDDMTIKLWDWENEWACEQTFEGHEHYVMQVAFNPKDPNTFASASL 161 (794)
T ss_pred ceeeEEe---eccccc--eeeeeecCCCCeEEecCCccEEEEeeccCceeeeeEEcCcceEEEEEEecCCCccceeeeec
Confidence 7655444 444432 234567777779999999999999999754 6888999999999999999 349999999
Q ss_pred CCcEEEEECCCCceeEEEecCCCCceEEEEEEcC--CCCEEEEEECCCcEEEEeC--CcceeeeecccceEEEEEe--cC
Q 008820 401 DGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTA--VQHTLVVSHESGSIKVWRN--DKFMKSMQTHKGSVFAVFL--EG 474 (552)
Q Consensus 401 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~--~~~~l~~g~~dg~i~iwd~--~~~~~~~~~h~~~v~~v~~--~~ 474 (552)
|++|++|.+.+..+..++.+|..+ +.++ .+-+ |..+|++|+.|.+|+|||. .++++++.+|...|..+.| .-
T Consensus 162 DrTVKVWslgs~~~nfTl~gHekG-VN~V-dyy~~gdkpylIsgaDD~tiKvWDyQtk~CV~TLeGHt~Nvs~v~fhp~l 239 (794)
T KOG0276|consen 162 DRTVKVWSLGSPHPNFTLEGHEKG-VNCV-DYYTGGDKPYLISGADDLTIKVWDYQTKSCVQTLEGHTNNVSFVFFHPEL 239 (794)
T ss_pred cccEEEEEcCCCCCceeeeccccC-cceE-EeccCCCcceEEecCCCceEEEeecchHHHHHHhhcccccceEEEecCCC
Confidence 999999999999999999988654 4554 4433 4469999999999999995 4699999999999999988 55
Q ss_pred CEEEEEeCCCeEEEEecCCCeeeeeeccCCCcccCcceEEEEEe--CCeEEEEeCCCeEEE
Q 008820 475 KWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYW--QGKLFVGCADRTVKI 533 (552)
Q Consensus 475 ~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~s~Dg~v~i 533 (552)
..++|||+||+++||+..+-++...+... ...+.+++.. ++.+++|...|.|.+
T Consensus 240 piiisgsEDGTvriWhs~Ty~lE~tLn~g-----leRvW~I~~~k~~~~i~vG~Deg~i~v 295 (794)
T KOG0276|consen 240 PIIISGSEDGTVRIWNSKTYKLEKTLNYG-----LERVWCIAAHKGDGKIAVGFDEGSVTV 295 (794)
T ss_pred cEEEEecCCccEEEecCcceehhhhhhcC-----CceEEEEeecCCCCeEEEeccCCcEEE
Confidence 68999999999999999887665554432 5668888876 455777777776654
No 48
>KOG0277 consensus Peroxisomal targeting signal type 2 receptor [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.97 E-value=1.3e-28 Score=210.96 Aligned_cols=268 Identities=17% Similarity=0.252 Sum_probs=209.8
Q ss_pred EEEEEc---CCEEEEEe-------CCCcEEEEeCCCCeEEEEEe--CCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCC
Q 008820 256 TGLAVG---GGFLFSSS-------FDKSIHVWSLKDFSHVHTFK--GHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFS 323 (552)
Q Consensus 256 ~~l~~s---~~~l~s~s-------~dg~I~iwd~~~~~~~~~~~--~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~ 323 (552)
.++.|+ .++|+.+. ..|++.|-++..++-+..+. .-.+.+..++|+++.++.+++++.||++++||+.
T Consensus 12 ysvqfSPf~~nrLavAt~q~yGl~G~G~L~ile~~~~~gi~e~~s~d~~D~LfdV~Wse~~e~~~~~a~GDGSLrl~d~~ 91 (311)
T KOG0277|consen 12 YSVQFSPFVENRLAVATAQHYGLAGNGRLFILEVTDPKGIQECQSYDTEDGLFDVAWSENHENQVIAASGDGSLRLFDLT 91 (311)
T ss_pred ceeEecccccchhheeehhhcccccCceEEEEecCCCCCeEEEEeeecccceeEeeecCCCcceEEEEecCceEEEeccC
Confidence 356666 44444432 36889999986555444433 2467899999999999999999999999999954
Q ss_pred CCCCCccccccccCCCceeeeEEEEeeC---CCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe---CCEEEE
Q 008820 324 FPLGHEPLKKWNEEKDWRYSGIHALTTS---GRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC---NGVLYS 397 (552)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~---~~~l~s 397 (552)
....++..+..|.. .+.++.++ +..++++|.|++|++|+...++.+.++.+|..-|....|+ ++.+++
T Consensus 92 --~~s~Pi~~~kEH~~----EV~Svdwn~~~r~~~ltsSWD~TiKLW~~~r~~Sv~Tf~gh~~~Iy~a~~sp~~~nlfas 165 (311)
T KOG0277|consen 92 --MPSKPIHKFKEHKR----EVYSVDWNTVRRRIFLTSSWDGTIKLWDPNRPNSVQTFNGHNSCIYQAAFSPHIPNLFAS 165 (311)
T ss_pred --CCCcchhHHHhhhh----heEEeccccccceeEEeeccCCceEeecCCCCcceEeecCCccEEEEEecCCCCCCeEEE
Confidence 34457777776654 34455543 4478888999999999999999999999999999999999 679999
Q ss_pred EeCCCcEEEEECCCCceeEEEecCCCCceEEEEEEc-CCCCEEEEEECCCcEEEEeCC---cceeeeecccceEEEEEe-
Q 008820 398 GSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLT-AVQHTLVVSHESGSIKVWRND---KFMKSMQTHKGSVFAVFL- 472 (552)
Q Consensus 398 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s-~~~~~l~~g~~dg~i~iwd~~---~~~~~~~~h~~~v~~v~~- 472 (552)
+|.|+++++||++.......+..|. ..+.+ +.|+ .+.+.+++|+.|+.|++||++ .++..+.+|.-.|..+.+
T Consensus 166 ~Sgd~~l~lwdvr~~gk~~~i~ah~-~Eil~-cdw~ky~~~vl~Tg~vd~~vr~wDir~~r~pl~eL~gh~~AVRkvk~S 243 (311)
T KOG0277|consen 166 ASGDGTLRLWDVRSPGKFMSIEAHN-SEILC-CDWSKYNHNVLATGGVDNLVRGWDIRNLRTPLFELNGHGLAVRKVKFS 243 (311)
T ss_pred ccCCceEEEEEecCCCceeEEEecc-ceeEe-ecccccCCcEEEecCCCceEEEEehhhccccceeecCCceEEEEEecC
Confidence 9999999999998755444477664 34444 3555 467889999999999999965 578889999999999987
Q ss_pred --cCCEEEEEeCCCeEEEEecCCCe-eeeeeccCCCcccCcceEEEEEe---CCeEEEEeCCCeEEEEEe
Q 008820 473 --EGKWLFTGGWDKTVSVQELAGDE-FEEDVIPTGAIPCGSVITALLYW---QGKLFVGCADRTVKIALC 536 (552)
Q Consensus 473 --~~~~l~sgs~dg~i~iwd~~~~~-~~~~~~~~~~~~~~~~v~~l~~~---~~~l~s~s~Dg~v~iw~~ 536 (552)
....|++++.|-+++|||...+. ......+ |...+..+.|+ ++.+++++.|+.++||+.
T Consensus 244 ph~~~lLaSasYDmT~riw~~~~~ds~~e~~~~-----HtEFv~g~Dws~~~~~~vAs~gWDe~l~Vw~p 308 (311)
T KOG0277|consen 244 PHHASLLASASYDMTVRIWDPERQDSAIETVDH-----HTEFVCGLDWSLFDPGQVASTGWDELLYVWNP 308 (311)
T ss_pred cchhhHhhhccccceEEecccccchhhhhhhhc-----cceEEeccccccccCceeeecccccceeeecc
Confidence 56789999999999999998443 2223222 25568888888 578999999999999984
No 49
>KOG0266 consensus WD40 repeat-containing protein [General function prediction only]
Probab=99.97 E-value=4.1e-28 Score=245.49 Aligned_cols=267 Identities=23% Similarity=0.373 Sum_probs=224.2
Q ss_pred ccccceeeecCcceEEEeeCCCeEEEEEe-----------ecCccceEEEEEc--CCEEEEEeCCCcEEEEeC-CCCeEE
Q 008820 220 ADIDQARAAGGVKDLVNGLSKGNVKFKDL-----------QGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSL-KDFSHV 285 (552)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-----------~~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~-~~~~~~ 285 (552)
..+....++..++.+++...++.+.+|.. .+|...|++++|+ ++++++++.|++|+|||+ ..+..+
T Consensus 160 ~sv~~~~fs~~g~~l~~~~~~~~i~~~~~~~~~~~~~~~l~~h~~~v~~~~fs~d~~~l~s~s~D~tiriwd~~~~~~~~ 239 (456)
T KOG0266|consen 160 PSVTCVDFSPDGRALAAASSDGLIRIWKLEGIKSNLLRELSGHTRGVSDVAFSPDGSYLLSGSDDKTLRIWDLKDDGRNL 239 (456)
T ss_pred CceEEEEEcCCCCeEEEccCCCcEEEeecccccchhhccccccccceeeeEECCCCcEEEEecCCceEEEeeccCCCeEE
Confidence 34666888888888888888888887765 6899999999999 889999999999999999 566899
Q ss_pred EEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEE
Q 008820 286 HTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIK 365 (552)
Q Consensus 286 ~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~ 365 (552)
+++++|...|++++|+|++ +++++|+.|++|++||+++++.. ..+..+.. .....+|++++++|++++.|+.|+
T Consensus 240 ~~l~gH~~~v~~~~f~p~g-~~i~Sgs~D~tvriWd~~~~~~~---~~l~~hs~--~is~~~f~~d~~~l~s~s~d~~i~ 313 (456)
T KOG0266|consen 240 KTLKGHSTYVTSVAFSPDG-NLLVSGSDDGTVRIWDVRTGECV---RKLKGHSD--GISGLAFSPDGNLLVSASYDGTIR 313 (456)
T ss_pred EEecCCCCceEEEEecCCC-CEEEEecCCCcEEEEeccCCeEE---EeeeccCC--ceEEEEECCCCCEEEEcCCCccEE
Confidence 9999999999999999988 79999999999999999985443 44444443 233458899999999999999999
Q ss_pred EEECCCCc--eeEEecCCCCC--eEEEEEe--CCEEEEEeCCCcEEEEECCCCceeEEEecCCCCc-eEEEEEEcCCCCE
Q 008820 366 AWSLLDGT--LSCTMSGHKSA--VSTLAVC--NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGA-VSSVLSLTAVQHT 438 (552)
Q Consensus 366 iwd~~~~~--~~~~~~~h~~~--v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~~ 438 (552)
+||+.++. +...+.++... ++++.|+ +.++++++.|+.+++||++.+.....+..+.... .......++.+.+
T Consensus 314 vwd~~~~~~~~~~~~~~~~~~~~~~~~~fsp~~~~ll~~~~d~~~~~w~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (456)
T KOG0266|consen 314 VWDLETGSKLCLKLLSGAENSAPVTSVQFSPNGKYLLSASLDRTLKLWDLRSGKSVGTYTGHSNLVRCIFSPTLSTGGKL 393 (456)
T ss_pred EEECCCCceeeeecccCCCCCCceeEEEECCCCcEEEEecCCCeEEEEEccCCcceeeecccCCcceeEecccccCCCCe
Confidence 99999999 66777776665 9999998 3499999999999999999999999998886652 1111234778999
Q ss_pred EEEEECCCcEEEEeCC--cceeeeecc-cceEEEEEe--cCCEEEEEe--CCCeEEEEecC
Q 008820 439 LVVSHESGSIKVWRND--KFMKSMQTH-KGSVFAVFL--EGKWLFTGG--WDKTVSVQELA 492 (552)
Q Consensus 439 l~~g~~dg~i~iwd~~--~~~~~~~~h-~~~v~~v~~--~~~~l~sgs--~dg~i~iwd~~ 492 (552)
+++|+.|+.|++||.. ..+..+.+| ...+..+.+ ...++++++ .|+.+++|..+
T Consensus 394 i~sg~~d~~v~~~~~~s~~~~~~l~~h~~~~~~~~~~~~~~~~~~s~s~~~d~~~~~w~~~ 454 (456)
T KOG0266|consen 394 IYSGSEDGSVYVWDSSSGGILQRLEGHSKAAVSDLSSHPTENLIASSSFEGDGLIRLWKYD 454 (456)
T ss_pred EEEEeCCceEEEEeCCccchhhhhcCCCCCceeccccCCCcCeeeecCcCCCceEEEecCC
Confidence 9999999999999965 467788899 788777765 788999888 78999999764
No 50
>KOG0306 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=99.96 E-value=3e-27 Score=230.68 Aligned_cols=318 Identities=21% Similarity=0.339 Sum_probs=253.5
Q ss_pred ccccceeeecCcceEEEeeCCCeEEEEE---------eecCccceEEEEEc--CCEEEEEeCCCcEEEEeCCCCeEEEEE
Q 008820 220 ADIDQARAAGGVKDLVNGLSKGNVKFKD---------LQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTF 288 (552)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------l~~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~~~~~~~ 288 (552)
+.+.....+++...++.|..+|.+++|+ +.||..+|+++.|+ |..|+|||.|+.|.+||+-...-...+
T Consensus 66 ~evt~l~~~~d~l~lAVGYaDGsVqif~~~s~~~~~tfngHK~AVt~l~fd~~G~rlaSGskDt~IIvwDlV~E~Gl~rL 145 (888)
T KOG0306|consen 66 AEVTCLRSSDDILLLAVGYADGSVQIFSLESEEILITFNGHKAAVTTLKFDKIGTRLASGSKDTDIIVWDLVGEEGLFRL 145 (888)
T ss_pred ceEEEeeccCCcceEEEEecCceEEeeccCCCceeeeecccccceEEEEEcccCceEeecCCCccEEEEEeccceeeEEe
Confidence 3466666677777889999999999887 56899999999999 999999999999999999988888999
Q ss_pred eCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEE
Q 008820 289 KGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWS 368 (552)
Q Consensus 289 ~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd 368 (552)
.||.+.|+..-|.. +..++++.+.|+.|++||+++.. ++.+...+. ..+.++..+++.+++++.|+.+++|+
T Consensus 146 ~GHkd~iT~~~F~~-~~~~lvS~sKDs~iK~WdL~tqh---Cf~Thvd~r----~Eiw~l~~~~~~lvt~~~dse~~v~~ 217 (888)
T KOG0306|consen 146 RGHKDSITQALFLN-GDSFLVSVSKDSMIKFWDLETQH---CFETHVDHR----GEIWALVLDEKLLVTAGTDSELKVWE 217 (888)
T ss_pred ecchHHHhHHhccC-CCeEEEEeccCceEEEEecccce---eeeEEeccc----ceEEEEEEecceEEEEecCCceEEEE
Confidence 99999999998876 56799999999999999998653 334433332 34667777778899999999999998
Q ss_pred CCCC----------------------------------------------------------------------------
Q 008820 369 LLDG---------------------------------------------------------------------------- 372 (552)
Q Consensus 369 ~~~~---------------------------------------------------------------------------- 372 (552)
+...
T Consensus 218 L~~~~D~~~~~~~~s~~~~G~~~rqsk~R~i~l~~d~s~r~~~c~g~d~~~e~frI~s~~E~~k~l~Kk~k~~Kkka~t~ 297 (888)
T KOG0306|consen 218 LAFEDDEKETNRYISTKLRGTFIRQSKGREINLVTDFSDRFLVCQGADKVIELFRIRSKEEIAKILSKKLKRAKKKAETE 297 (888)
T ss_pred eecccccccccccceeeccceeeeccCCceeEEeecCcccEEEEecchhhhhheeecCHHHHHHHHHHHHHHhhhhcccc
Confidence 8100
Q ss_pred ------------------------------------ce------------------------------eEEecCCCCCeE
Q 008820 373 ------------------------------------TL------------------------------SCTMSGHKSAVS 386 (552)
Q Consensus 373 ------------------------------------~~------------------------------~~~~~~h~~~v~ 386 (552)
.. -..+.+|...|.
T Consensus 298 e~~~~v~~sl~~~i~r~~~ir~~~kiks~dv~~~~~~~~~lv~l~nNtv~~ysl~~s~~~~p~~~~~~~i~~~GHR~dVR 377 (888)
T KOG0306|consen 298 ENEDDVEKSLSDEIKRLETIRTSAKIKSFDVTPSGGTENTLVLLANNTVEWYSLENSGKTSPEADRTSNIEIGGHRSDVR 377 (888)
T ss_pred ccccchhhhHHHHHHHHHheechhheeEEEEEecCCcceeEEEeecCceEEEEeccCCCCCccccccceeeeccchhhee
Confidence 00 012347888999
Q ss_pred EEEEe-CCEEEEEeCCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEECCCcEEEEeCC--cceeeeecc
Q 008820 387 TLAVC-NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRND--KFMKSMQTH 463 (552)
Q Consensus 387 ~l~~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~--~~~~~~~~h 463 (552)
+++++ ++.++..+..+.+++|+..+.+++.++... ...+..|-|.++++++|...|.+.+||+. ..+.+.+.|
T Consensus 378 sl~vS~d~~~~~Sga~~SikiWn~~t~kciRTi~~~----y~l~~~Fvpgd~~Iv~G~k~Gel~vfdlaS~~l~Eti~AH 453 (888)
T KOG0306|consen 378 SLCVSSDSILLASGAGESIKIWNRDTLKCIRTITCG----YILASKFVPGDRYIVLGTKNGELQVFDLASASLVETIRAH 453 (888)
T ss_pred EEEeecCceeeeecCCCcEEEEEccCcceeEEeccc----cEEEEEecCCCceEEEeccCCceEEEEeehhhhhhhhhcc
Confidence 99999 556666667889999999999999999743 33336899999999999999999999954 567788899
Q ss_pred cceEEEEE--ecCCEEEEEeCCCeEEEEecCC-----Ce--eeeeeccCCCcccCcceEEEEEeCC--eEEEEeCCCeEE
Q 008820 464 KGSVFAVF--LEGKWLFTGGWDKTVSVQELAG-----DE--FEEDVIPTGAIPCGSVITALLYWQG--KLFVGCADRTVK 532 (552)
Q Consensus 464 ~~~v~~v~--~~~~~l~sgs~dg~i~iwd~~~-----~~--~~~~~~~~~~~~~~~~v~~l~~~~~--~l~s~s~Dg~v~ 532 (552)
.+.+++++ +|+..+++||.|.+|++||..- +. ......+...+.-...|.++.++|+ .|+++--|.+|+
T Consensus 454 dgaIWsi~~~pD~~g~vT~saDktVkfWdf~l~~~~~gt~~k~lsl~~~rtLel~ddvL~v~~Spdgk~LaVsLLdnTVk 533 (888)
T KOG0306|consen 454 DGAIWSISLSPDNKGFVTGSADKTVKFWDFKLVVSVPGTQKKVLSLKHTRTLELEDDVLCVSVSPDGKLLAVSLLDNTVK 533 (888)
T ss_pred ccceeeeeecCCCCceEEecCCcEEEEEeEEEEeccCcccceeeeeccceEEeccccEEEEEEcCCCcEEEEEeccCeEE
Confidence 99999887 4999999999999999999741 11 1112222233344667999999964 377888999999
Q ss_pred EEEecCCcceeEEEeccc
Q 008820 533 IALCNRQIPEIFSLLLHI 550 (552)
Q Consensus 533 iw~~~~~~~~~~~~~gh~ 550 (552)
||-++ +.+-..++.||+
T Consensus 534 VyflD-tlKFflsLYGHk 550 (888)
T KOG0306|consen 534 VYFLD-TLKFFLSLYGHK 550 (888)
T ss_pred EEEec-ceeeeeeecccc
Confidence 99998 777788999996
No 51
>KOG0316 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.96 E-value=5.8e-28 Score=204.70 Aligned_cols=262 Identities=18% Similarity=0.253 Sum_probs=216.2
Q ss_pred ccccceeeecCcceEEEeeCCCeEEEEE---------eecCccceEEEEEc--CCEEEEEeCCCcEEEEeCCCCeEEEEE
Q 008820 220 ADIDQARAAGGVKDLVNGLSKGNVKFKD---------LQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTF 288 (552)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------l~~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~~~~~~~ 288 (552)
..+..+.+...++..++...+..+++|+ +.||...|..++.+ +..+++|+.|..|.+||+++|+.++.+
T Consensus 18 gaV~avryN~dGnY~ltcGsdrtvrLWNp~rg~liktYsghG~EVlD~~~s~Dnskf~s~GgDk~v~vwDV~TGkv~Rr~ 97 (307)
T KOG0316|consen 18 GAVRAVRYNVDGNYCLTCGSDRTVRLWNPLRGALIKTYSGHGHEVLDAALSSDNSKFASCGGDKAVQVWDVNTGKVDRRF 97 (307)
T ss_pred cceEEEEEccCCCEEEEcCCCceEEeecccccceeeeecCCCceeeeccccccccccccCCCCceEEEEEcccCeeeeec
Confidence 3477888999999999999999988886 67999999999887 889999999999999999999999999
Q ss_pred eCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEE
Q 008820 289 KGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWS 368 (552)
Q Consensus 289 ~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd 368 (552)
.+|.+.|+.+.|+. ....+++|+.|.++++||.++.. ..+++.+....+ .+.++...+..|++|+.||+++.||
T Consensus 98 rgH~aqVNtV~fNe-esSVv~SgsfD~s~r~wDCRS~s-~ePiQildea~D----~V~Si~v~~heIvaGS~DGtvRtyd 171 (307)
T KOG0316|consen 98 RGHLAQVNTVRFNE-ESSVVASGSFDSSVRLWDCRSRS-FEPIQILDEAKD----GVSSIDVAEHEIVAGSVDGTVRTYD 171 (307)
T ss_pred ccccceeeEEEecC-cceEEEeccccceeEEEEcccCC-CCccchhhhhcC----ceeEEEecccEEEeeccCCcEEEEE
Confidence 99999999999976 55689999999999999998643 345555544333 4667788888999999999999999
Q ss_pred CCCCceeEEecCCCCCeEEEEEe--CCEEEEEeCCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEECCC
Q 008820 369 LLDGTLSCTMSGHKSAVSTLAVC--NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESG 446 (552)
Q Consensus 369 ~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg 446 (552)
++.|+....+.+ .+|+|++|+ ++..+.++.|+++++.|-.+|+.+..+++|.......-++++.....+++|++||
T Consensus 172 iR~G~l~sDy~g--~pit~vs~s~d~nc~La~~l~stlrLlDk~tGklL~sYkGhkn~eykldc~l~qsdthV~sgSEDG 249 (307)
T KOG0316|consen 172 IRKGTLSSDYFG--HPITSVSFSKDGNCSLASSLDSTLRLLDKETGKLLKSYKGHKNMEYKLDCCLNQSDTHVFSGSEDG 249 (307)
T ss_pred eecceeehhhcC--CcceeEEecCCCCEEEEeeccceeeecccchhHHHHHhcccccceeeeeeeecccceeEEeccCCc
Confidence 999988776654 579999999 4588999999999999999999999999887665555567888889999999999
Q ss_pred cEEEEeCC--cceeeeecccce-EEEEEe--cCCEEEEEeCCCeEEEEe
Q 008820 447 SIKVWRND--KFMKSMQTHKGS-VFAVFL--EGKWLFTGGWDKTVSVQE 490 (552)
Q Consensus 447 ~i~iwd~~--~~~~~~~~h~~~-v~~v~~--~~~~l~sgs~dg~i~iwd 490 (552)
.|++||+- ..+..+..|... +.++++ .-..++++. ++.+.+|-
T Consensus 250 ~Vy~wdLvd~~~~sk~~~~~~v~v~dl~~hp~~~~f~~A~-~~~~~~~~ 297 (307)
T KOG0316|consen 250 KVYFWDLVDETQISKLSVVSTVIVTDLSCHPTMDDFITAT-GHGDLFWY 297 (307)
T ss_pred eEEEEEeccceeeeeeccCCceeEEeeecccCccceeEec-CCceecee
Confidence 99999964 455666667666 667765 333444444 34556664
No 52
>KOG0285 consensus Pleiotropic regulator 1 [RNA processing and modification]
Probab=99.96 E-value=1.2e-28 Score=220.81 Aligned_cols=242 Identities=21% Similarity=0.327 Sum_probs=200.2
Q ss_pred CeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCC
Q 008820 282 FSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGD 361 (552)
Q Consensus 282 ~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~d 361 (552)
.+..+.+++|.+.|.++++-|. +.+|++|+.|++|+|||+.+++....+.. +.. ...-.++++...++++++.|
T Consensus 141 wKl~rVi~gHlgWVr~vavdP~-n~wf~tgs~DrtikIwDlatg~LkltltG---hi~--~vr~vavS~rHpYlFs~ged 214 (460)
T KOG0285|consen 141 WKLYRVISGHLGWVRSVAVDPG-NEWFATGSADRTIKIWDLATGQLKLTLTG---HIE--TVRGVAVSKRHPYLFSAGED 214 (460)
T ss_pred ceehhhhhhccceEEEEeeCCC-ceeEEecCCCceeEEEEcccCeEEEeecc---hhh--eeeeeeecccCceEEEecCC
Confidence 3556778899999999999885 56889999999999999998765444332 211 11123566666699999999
Q ss_pred CcEEEEECCCCceeEEecCCCCCeEEEEEe--CCEEEEEeCCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEE
Q 008820 362 RTIKAWSLLDGTLSCTMSGHKSAVSTLAVC--NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTL 439 (552)
Q Consensus 362 g~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l 439 (552)
+.|+.||++..+.++.+.+|-+.|.|++.+ .+.|++|+.|.++|+||+++...+..+.+|. ..+..+ .+.|-...+
T Consensus 215 k~VKCwDLe~nkvIR~YhGHlS~V~~L~lhPTldvl~t~grDst~RvWDiRtr~~V~~l~GH~-~~V~~V-~~~~~dpqv 292 (460)
T KOG0285|consen 215 KQVKCWDLEYNKVIRHYHGHLSGVYCLDLHPTLDVLVTGGRDSTIRVWDIRTRASVHVLSGHT-NPVASV-MCQPTDPQV 292 (460)
T ss_pred CeeEEEechhhhhHHHhccccceeEEEeccccceeEEecCCcceEEEeeecccceEEEecCCC-CcceeE-EeecCCCce
Confidence 999999999999999999999999999999 5699999999999999999999999999874 556664 566666789
Q ss_pred EEEECCCcEEEEeCC--cceeeeecccceEEEEEe--cCCEEEEEeCCCeEEEEecCCCeeeeeeccCCCcccCcceEEE
Q 008820 440 VVSHESGSIKVWRND--KFMKSMQTHKGSVFAVFL--EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITAL 515 (552)
Q Consensus 440 ~~g~~dg~i~iwd~~--~~~~~~~~h~~~v~~v~~--~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l 515 (552)
++|+.|++|++||++ +...++..|...|.++.. ....+++++.| .|+.|++..+.....+..+ ...|+++
T Consensus 293 it~S~D~tvrlWDl~agkt~~tlt~hkksvral~lhP~e~~fASas~d-nik~w~~p~g~f~~nlsgh-----~~iintl 366 (460)
T KOG0285|consen 293 ITGSHDSTVRLWDLRAGKTMITLTHHKKSVRALCLHPKENLFASASPD-NIKQWKLPEGEFLQNLSGH-----NAIINTL 366 (460)
T ss_pred EEecCCceEEEeeeccCceeEeeecccceeeEEecCCchhhhhccCCc-cceeccCCccchhhccccc-----cceeeee
Confidence 999999999999964 567788889999988875 67788888876 6999999988776653332 6678899
Q ss_pred EEe-CCeEEEEeCCCeEEEEEec
Q 008820 516 LYW-QGKLFVGCADRTVKIALCN 537 (552)
Q Consensus 516 ~~~-~~~l~s~s~Dg~v~iw~~~ 537 (552)
+.+ ++.+++|+..|.+.+||.+
T Consensus 367 ~~nsD~v~~~G~dng~~~fwdwk 389 (460)
T KOG0285|consen 367 SVNSDGVLVSGGDNGSIMFWDWK 389 (460)
T ss_pred eeccCceEEEcCCceEEEEEecC
Confidence 887 6889999999999999997
No 53
>KOG0318 consensus WD40 repeat stress protein/actin interacting protein [Cytoskeleton]
Probab=99.96 E-value=1.8e-26 Score=216.82 Aligned_cols=313 Identities=16% Similarity=0.214 Sum_probs=251.1
Q ss_pred cCCCCCCCccccceeeecCcceEEEeeCCCeEEEEEe-----------ecCccceEEEEEc--CCEEEEEeC--CCcEEE
Q 008820 212 LGAENSDGADIDQARAAGGVKDLVNGLSKGNVKFKDL-----------QGHRDCVTGLAVG--GGFLFSSSF--DKSIHV 276 (552)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-----------~~H~~~V~~l~~s--~~~l~s~s~--dg~I~i 276 (552)
......++..+..+.+++.+..++++...|++++|.- +--.++|..++|+ +++++..+. ++-.++
T Consensus 52 ~~iYtEH~~~vtVAkySPsG~yiASGD~sG~vRIWdtt~~~hiLKnef~v~aG~I~Di~Wd~ds~RI~avGEGrerfg~~ 131 (603)
T KOG0318|consen 52 VDIYTEHAHQVTVAKYSPSGFYIASGDVSGKVRIWDTTQKEHILKNEFQVLAGPIKDISWDFDSKRIAAVGEGRERFGHV 131 (603)
T ss_pred eeeeccccceeEEEEeCCCceEEeecCCcCcEEEEeccCcceeeeeeeeecccccccceeCCCCcEEEEEecCccceeEE
Confidence 3344555667888999999999999999999999973 3346899999999 666666543 333444
Q ss_pred EeCCCCeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCcccc-ccccCCCceeeeEEEEeeCCCEE
Q 008820 277 WSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLK-KWNEEKDWRYSGIHALTTSGRYL 355 (552)
Q Consensus 277 wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l 355 (552)
+-.++|..+-.+.||...|+++.|-|..+..+++|+.|++|.+|+=.. ..++ .+..|.. ......++|||+.+
T Consensus 132 F~~DSG~SvGei~GhSr~ins~~~KpsRPfRi~T~sdDn~v~ffeGPP----FKFk~s~r~Hsk--FV~~VRysPDG~~F 205 (603)
T KOG0318|consen 132 FLWDSGNSVGEITGHSRRINSVDFKPSRPFRIATGSDDNTVAFFEGPP----FKFKSSFREHSK--FVNCVRYSPDGSRF 205 (603)
T ss_pred EEecCCCccceeeccceeEeeeeccCCCceEEEeccCCCeEEEeeCCC----eeeeeccccccc--ceeeEEECCCCCeE
Confidence 444588889999999999999999999999999999999999997431 1111 2222222 23456889999999
Q ss_pred EEeeCCCcEEEEECCCCceeEEec---CCCCCeEEEEEe-CC-EEEEEeCCCcEEEEECCCCceeEEEecCCC--CceEE
Q 008820 356 YTGSGDRTIKAWSLLDGTLSCTMS---GHKSAVSTLAVC-NG-VLYSGSRDGTIRLWSLSDHSLLTVLEEDSS--GAVSS 428 (552)
Q Consensus 356 ~sgs~dg~i~iwd~~~~~~~~~~~---~h~~~v~~l~~~-~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~--~~~~~ 428 (552)
++++.||++.+||-.+++.+..+. +|++.|.+++|+ ++ .+++++.|.+++|||+.+.+++.++..... .....
T Consensus 206 at~gsDgki~iyDGktge~vg~l~~~~aHkGsIfalsWsPDs~~~~T~SaDkt~KIWdVs~~slv~t~~~~~~v~dqqvG 285 (603)
T KOG0318|consen 206 ATAGSDGKIYIYDGKTGEKVGELEDSDAHKGSIFALSWSPDSTQFLTVSADKTIKIWDVSTNSLVSTWPMGSTVEDQQVG 285 (603)
T ss_pred EEecCCccEEEEcCCCccEEEEecCCCCccccEEEEEECCCCceEEEecCCceEEEEEeeccceEEEeecCCchhceEEE
Confidence 999999999999999999999997 899999999999 43 999999999999999999999999876644 33333
Q ss_pred EEEEcCCCCEEEEEECCCcEEEEeCC--cceeeeecccceEEEEEe--cCCEEEEEeCCCeEEEEecCCCeeeeeeccCC
Q 008820 429 VLSLTAVQHTLVVSHESGSIKVWRND--KFMKSMQTHKGSVFAVFL--EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTG 504 (552)
Q Consensus 429 ~~~~s~~~~~l~~g~~dg~i~iwd~~--~~~~~~~~h~~~v~~v~~--~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~ 504 (552)
+ -|. ...|++-+.+|+|.+++.. ...+.+.+|...|+++.. ++++|++|+.||.|.-||..++........
T Consensus 286 ~-lWq--kd~lItVSl~G~in~ln~~d~~~~~~i~GHnK~ITaLtv~~d~~~i~SgsyDG~I~~W~~~~g~~~~~~g~-- 360 (603)
T KOG0318|consen 286 C-LWQ--KDHLITVSLSGTINYLNPSDPSVLKVISGHNKSITALTVSPDGKTIYSGSYDGHINSWDSGSGTSDRLAGK-- 360 (603)
T ss_pred E-EEe--CCeEEEEEcCcEEEEecccCCChhheecccccceeEEEEcCCCCEEEeeccCceEEEEecCCccccccccc--
Confidence 2 233 5678899999999999854 478899999999999875 899999999999999999988754333211
Q ss_pred CcccCcceEEEEEeC-CeEEEEeCCCeEEEEEec
Q 008820 505 AIPCGSVITALLYWQ-GKLFVGCADRTVKIALCN 537 (552)
Q Consensus 505 ~~~~~~~v~~l~~~~-~~l~s~s~Dg~v~iw~~~ 537 (552)
.+...|..++.+. +.+++.+.|.++++.++.
T Consensus 361 --~h~nqI~~~~~~~~~~~~t~g~Dd~l~~~~~~ 392 (603)
T KOG0318|consen 361 --GHTNQIKGMAASESGELFTIGWDDTLRVISLK 392 (603)
T ss_pred --cccceEEEEeecCCCcEEEEecCCeEEEEecc
Confidence 2367799999886 889999999999999875
No 54
>KOG0278 consensus Serine/threonine kinase receptor-associated protein [Lipid transport and metabolism]
Probab=99.96 E-value=1.1e-28 Score=210.75 Aligned_cols=277 Identities=20% Similarity=0.263 Sum_probs=226.4
Q ss_pred EeecCccceEEEEEc-----CCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEe
Q 008820 247 DLQGHRDCVTGLAVG-----GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWS 321 (552)
Q Consensus 247 ~l~~H~~~V~~l~~s-----~~~l~s~s~dg~I~iwd~~~~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd 321 (552)
.-.||..+|-.++|+ |-+|++++.|+.=.+-+-++|.-+.+|.+|.+.|.+..... +....++++.|=+-++||
T Consensus 9 ~c~ghtrpvvdl~~s~itp~g~flisa~kd~~pmlr~g~tgdwigtfeghkgavw~~~l~~-na~~aasaaadftakvw~ 87 (334)
T KOG0278|consen 9 TCHGHTRPVVDLAFSPITPDGYFLISASKDGKPMLRNGDTGDWIGTFEGHKGAVWSATLNK-NATRAASAAADFTAKVWD 87 (334)
T ss_pred EEcCCCcceeEEeccCCCCCceEEEEeccCCCchhccCCCCCcEEeeeccCcceeeeecCc-hhhhhhhhcccchhhhhh
Confidence 457999999999999 88999999999999989999999999999999999988755 445678999999999999
Q ss_pred CCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCc-eeEEecCCCCCeEEEEEe--CCEEEEE
Q 008820 322 FSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGT-LSCTMSGHKSAVSTLAVC--NGVLYSG 398 (552)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~-~~~~~~~h~~~v~~l~~~--~~~l~s~ 398 (552)
.-++.....+.. .+.....+|+.|.++|++|+.+..+++||++..+ +...+.+|.+.|..+.|. ++.++++
T Consensus 88 a~tgdelhsf~h------khivk~~af~~ds~~lltgg~ekllrvfdln~p~App~E~~ghtg~Ir~v~wc~eD~~iLSS 161 (334)
T KOG0278|consen 88 AVTGDELHSFEH------KHIVKAVAFSQDSNYLLTGGQEKLLRVFDLNRPKAPPKEISGHTGGIRTVLWCHEDKCILSS 161 (334)
T ss_pred hhhhhhhhhhhh------hheeeeEEecccchhhhccchHHHhhhhhccCCCCCchhhcCCCCcceeEEEeccCceEEee
Confidence 887754443322 1445567899999999999999999999998654 566889999999999998 6699999
Q ss_pred eCCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEECCCcEEEEeCCc--ceeeeecccc-eEEEEEecCC
Q 008820 399 SRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDK--FMKSMQTHKG-SVFAVFLEGK 475 (552)
Q Consensus 399 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~~--~~~~~~~h~~-~v~~v~~~~~ 475 (552)
+.|++||+||.++++.++++...+. +.+ +.++++|++|.++ ..+.|.+||... .++.++.... .-.++.|+..
T Consensus 162 add~tVRLWD~rTgt~v~sL~~~s~--VtS-lEvs~dG~ilTia-~gssV~Fwdaksf~~lKs~k~P~nV~SASL~P~k~ 237 (334)
T KOG0278|consen 162 ADDKTVRLWDHRTGTEVQSLEFNSP--VTS-LEVSQDGRILTIA-YGSSVKFWDAKSFGLLKSYKMPCNVESASLHPKKE 237 (334)
T ss_pred ccCCceEEEEeccCcEEEEEecCCC--Ccc-eeeccCCCEEEEe-cCceeEEeccccccceeeccCccccccccccCCCc
Confidence 9999999999999999999987543 444 6899999877665 456899999664 4444443221 2234567889
Q ss_pred EEEEEeCCCeEEEEecCCCeeeeeeccCCCcccCcceEEEEEeCCe--EEEEeCCCeEEEEEecC
Q 008820 476 WLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQGK--LFVGCADRTVKIALCNR 538 (552)
Q Consensus 476 ~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~--l~s~s~Dg~v~iw~~~~ 538 (552)
.+++|++|..++.||..+++...... ..+.++|.++.|+|+. .++||.||+|++|....
T Consensus 238 ~fVaGged~~~~kfDy~TgeEi~~~n----kgh~gpVhcVrFSPdGE~yAsGSEDGTirlWQt~~ 298 (334)
T KOG0278|consen 238 FFVAGGEDFKVYKFDYNTGEEIGSYN----KGHFGPVHCVRFSPDGELYASGSEDGTIRLWQTTP 298 (334)
T ss_pred eEEecCcceEEEEEeccCCceeeecc----cCCCCceEEEEECCCCceeeccCCCceEEEEEecC
Confidence 99999999999999999987766531 2237789999999754 78899999999999874
No 55
>KOG0293 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.96 E-value=3.5e-28 Score=221.67 Aligned_cols=269 Identities=16% Similarity=0.280 Sum_probs=222.3
Q ss_pred CCccccceeeecCcceEEEeeCCCeEEEEE------------eecCccceEEEEEc--CCEEEEEeCCCcEEEEeCCCCe
Q 008820 218 DGADIDQARAAGGVKDLVNGLSKGNVKFKD------------LQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFS 283 (552)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------l~~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~~ 283 (552)
+...+.-..++.+++.+++++.+.+..+|. +.||..+|..+.|+ .++|++|+.|..+++||+.+|.
T Consensus 223 htdEVWfl~FS~nGkyLAsaSkD~Taiiw~v~~d~~~kl~~tlvgh~~~V~yi~wSPDdryLlaCg~~e~~~lwDv~tgd 302 (519)
T KOG0293|consen 223 HTDEVWFLQFSHNGKYLASASKDSTAIIWIVVYDVHFKLKKTLVGHSQPVSYIMWSPDDRYLLACGFDEVLSLWDVDTGD 302 (519)
T ss_pred CCCcEEEEEEcCCCeeEeeccCCceEEEEEEecCcceeeeeeeecccCceEEEEECCCCCeEEecCchHheeeccCCcch
Confidence 344577888899999999999888877765 67999999999999 8999999999999999999999
Q ss_pred EEEEEe-CCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCC
Q 008820 284 HVHTFK-GHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDR 362 (552)
Q Consensus 284 ~~~~~~-~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg 362 (552)
....+. +|...+.+++|.|++. .+++|+.|+++..||++.. ....|..... ......++++||+++++.+.|.
T Consensus 303 ~~~~y~~~~~~S~~sc~W~pDg~-~~V~Gs~dr~i~~wdlDgn----~~~~W~gvr~-~~v~dlait~Dgk~vl~v~~d~ 376 (519)
T KOG0293|consen 303 LRHLYPSGLGFSVSSCAWCPDGF-RFVTGSPDRTIIMWDLDGN----ILGNWEGVRD-PKVHDLAITYDGKYVLLVTVDK 376 (519)
T ss_pred hhhhcccCcCCCcceeEEccCCc-eeEecCCCCcEEEecCCcc----hhhccccccc-ceeEEEEEcCCCcEEEEEeccc
Confidence 988775 3568899999999877 4699999999999999843 2444444333 2223457889999999999999
Q ss_pred cEEEEECCCCceeEEecCCCCCeEEEEEe-CC-EEEEEeCCCcEEEEECCCCceeEEEecCCCCceEEEEEEc-CCCCEE
Q 008820 363 TIKAWSLLDGTLSCTMSGHKSAVSTLAVC-NG-VLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLT-AVQHTL 439 (552)
Q Consensus 363 ~i~iwd~~~~~~~~~~~~h~~~v~~l~~~-~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s-~~~~~l 439 (552)
.|++++.++......+. ...+|+++..+ ++ ++++.-.+..+++||+...+.+..+.++..+...-..+|. .+..++
T Consensus 377 ~i~l~~~e~~~dr~lis-e~~~its~~iS~d~k~~LvnL~~qei~LWDl~e~~lv~kY~Ghkq~~fiIrSCFgg~~~~fi 455 (519)
T KOG0293|consen 377 KIRLYNREARVDRGLIS-EEQPITSFSISKDGKLALVNLQDQEIHLWDLEENKLVRKYFGHKQGHFIIRSCFGGGNDKFI 455 (519)
T ss_pred ceeeechhhhhhhcccc-ccCceeEEEEcCCCcEEEEEcccCeeEEeecchhhHHHHhhcccccceEEEeccCCCCcceE
Confidence 99999998766654444 45679999999 44 7778889999999999988888888888766655444554 345899
Q ss_pred EEEECCCcEEEEe--CCcceeeeecccceEEEEEe---cCCEEEEEeCCCeEEEEecCC
Q 008820 440 VVSHESGSIKVWR--NDKFMKSMQTHKGSVFAVFL---EGKWLFTGGWDKTVSVQELAG 493 (552)
Q Consensus 440 ~~g~~dg~i~iwd--~~~~~~~~~~h~~~v~~v~~---~~~~l~sgs~dg~i~iwd~~~ 493 (552)
++|++|+.|+||+ .++++..+.||...|++++| +..++|++|.||+|+||....
T Consensus 456 aSGSED~kvyIWhr~sgkll~~LsGHs~~vNcVswNP~~p~m~ASasDDgtIRIWg~~~ 514 (519)
T KOG0293|consen 456 ASGSEDSKVYIWHRISGKLLAVLSGHSKTVNCVSWNPADPEMFASASDDGTIRIWGPSD 514 (519)
T ss_pred EecCCCceEEEEEccCCceeEeecCCcceeeEEecCCCCHHHhhccCCCCeEEEecCCc
Confidence 9999999999999 56789999999999999998 677999999999999998764
No 56
>KOG0306 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=99.96 E-value=4.7e-27 Score=229.34 Aligned_cols=329 Identities=22% Similarity=0.297 Sum_probs=244.6
Q ss_pred cCCCCCCCccccceeeecCcceEEEeeCCCeEEEEE---------eecCccceEEEEEc--CCEEEEEeCCCcEEEEeCC
Q 008820 212 LGAENSDGADIDQARAAGGVKDLVNGLSKGNVKFKD---------LQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLK 280 (552)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------l~~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~ 280 (552)
....+.+-..+....++..+.++++++.|+.+.+|+ |+||.+.|+..-|. .+++++.|.|+.|++||++
T Consensus 100 ~~tfngHK~AVt~l~fd~~G~rlaSGskDt~IIvwDlV~E~Gl~rL~GHkd~iT~~~F~~~~~~lvS~sKDs~iK~WdL~ 179 (888)
T KOG0306|consen 100 LITFNGHKAAVTTLKFDKIGTRLASGSKDTDIIVWDLVGEEGLFRLRGHKDSITQALFLNGDSFLVSVSKDSMIKFWDLE 179 (888)
T ss_pred eeeecccccceEEEEEcccCceEeecCCCccEEEEEeccceeeEEeecchHHHhHHhccCCCeEEEEeccCceEEEEecc
Confidence 334444556688889999999999999999999998 58999999999998 7899999999999999999
Q ss_pred CCeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCC--------------------------------
Q 008820 281 DFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGH-------------------------------- 328 (552)
Q Consensus 281 ~~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~-------------------------------- 328 (552)
+..+..+.-.|.+.+.++++.+ .++++++.|+.+++|++......
T Consensus 180 tqhCf~Thvd~r~Eiw~l~~~~---~~lvt~~~dse~~v~~L~~~~D~~~~~~~~s~~~~G~~~rqsk~R~i~l~~d~s~ 256 (888)
T KOG0306|consen 180 TQHCFETHVDHRGEIWALVLDE---KLLVTAGTDSELKVWELAFEDDEKETNRYISTKLRGTFIRQSKGREINLVTDFSD 256 (888)
T ss_pred cceeeeEEecccceEEEEEEec---ceEEEEecCCceEEEEeecccccccccccceeeccceeeeccCCceeEEeecCcc
Confidence 9999999999999999999976 58899999999999998210000
Q ss_pred --------------------------------------c-----------------ccccc------------cc-CC--
Q 008820 329 --------------------------------------E-----------------PLKKW------------NE-EK-- 338 (552)
Q Consensus 329 --------------------------------------~-----------------~~~~~------------~~-~~-- 338 (552)
. .+... .. +.
T Consensus 257 r~~~c~g~d~~~e~frI~s~~E~~k~l~Kk~k~~Kkka~t~e~~~~v~~sl~~~i~r~~~ir~~~kiks~dv~~~~~~~~ 336 (888)
T KOG0306|consen 257 RFLVCQGADKVIELFRIRSKEEIAKILSKKLKRAKKKAETEENEDDVEKSLSDEIKRLETIRTSAKIKSFDVTPSGGTEN 336 (888)
T ss_pred cEEEEecchhhhhheeecCHHHHHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHheechhheeEEEEEecCCcce
Confidence 0 00000 00 00
Q ss_pred ---------------------------------CceeeeEE--EEeeCCCEEEEeeCCCcEEEEECCCCcee--------
Q 008820 339 ---------------------------------DWRYSGIH--ALTTSGRYLYTGSGDRTIKAWSLLDGTLS-------- 375 (552)
Q Consensus 339 ---------------------------------~~~~~~~~--~~~~~~~~l~sgs~dg~i~iwd~~~~~~~-------- 375 (552)
..+...+. +++.+...+++|+ .+.+++|+..+.+++
T Consensus 337 ~lv~l~nNtv~~ysl~~s~~~~p~~~~~~~i~~~GHR~dVRsl~vS~d~~~~~Sga-~~SikiWn~~t~kciRTi~~~y~ 415 (888)
T KOG0306|consen 337 TLVLLANNTVEWYSLENSGKTSPEADRTSNIEIGGHRSDVRSLCVSSDSILLASGA-GESIKIWNRDTLKCIRTITCGYI 415 (888)
T ss_pred eEEEeecCceEEEEeccCCCCCccccccceeeeccchhheeEEEeecCceeeeecC-CCcEEEEEccCcceeEEeccccE
Confidence 00000011 2222222333332 345666666555444
Q ss_pred --------------------------------EEecCCCCCeEEEEEe-CC-EEEEEeCCCcEEEEECCC-----CceeE
Q 008820 376 --------------------------------CTMSGHKSAVSTLAVC-NG-VLYSGSRDGTIRLWSLSD-----HSLLT 416 (552)
Q Consensus 376 --------------------------------~~~~~h~~~v~~l~~~-~~-~l~s~~~dg~i~iwd~~~-----~~~~~ 416 (552)
.++++|.+.|.+++.+ ++ .+++||.|.+|++||..- +...+
T Consensus 416 l~~~Fvpgd~~Iv~G~k~Gel~vfdlaS~~l~Eti~AHdgaIWsi~~~pD~~g~vT~saDktVkfWdf~l~~~~~gt~~k 495 (888)
T KOG0306|consen 416 LASKFVPGDRYIVLGTKNGELQVFDLASASLVETIRAHDGAIWSISLSPDNKGFVTGSADKTVKFWDFKLVVSVPGTQKK 495 (888)
T ss_pred EEEEecCCCceEEEeccCCceEEEEeehhhhhhhhhccccceeeeeecCCCCceEEecCCcEEEEEeEEEEeccCcccce
Confidence 3445789999999998 44 999999999999999742 22211
Q ss_pred EEecCC------CCceEEEEEEcCCCCEEEEEECCCcEEEEeCC--cceeeeecccceEEEEE--ecCCEEEEEeCCCeE
Q 008820 417 VLEEDS------SGAVSSVLSLTAVQHTLVVSHESGSIKVWRND--KFMKSMQTHKGSVFAVF--LEGKWLFTGGWDKTV 486 (552)
Q Consensus 417 ~~~~~~------~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~--~~~~~~~~h~~~v~~v~--~~~~~l~sgs~dg~i 486 (552)
.+..++ ...+.+ +.+|||+++|+++--|++|++|-+. +..-.+.||.-||.|+. +|++.++|||.|.+|
T Consensus 496 ~lsl~~~rtLel~ddvL~-v~~Spdgk~LaVsLLdnTVkVyflDtlKFflsLYGHkLPV~smDIS~DSklivTgSADKnV 574 (888)
T KOG0306|consen 496 VLSLKHTRTLELEDDVLC-VSVSPDGKLLAVSLLDNTVKVYFLDTLKFFLSLYGHKLPVLSMDISPDSKLIVTGSADKNV 574 (888)
T ss_pred eeeeccceEEeccccEEE-EEEcCCCcEEEEEeccCeEEEEEecceeeeeeecccccceeEEeccCCcCeEEeccCCCce
Confidence 122111 233444 6999999999999999999999655 45668889999999875 599999999999999
Q ss_pred EEEecCCCeeeeeeccCCCcccCcceEEEEEeCCe--EEEEeCCCeEEEEEecCCcceeEEEecccc
Q 008820 487 SVQELAGDEFEEDVIPTGAIPCGSVITALLYWQGK--LFVGCADRTVKIALCNRQIPEIFSLLLHIN 551 (552)
Q Consensus 487 ~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~--l~s~s~Dg~v~iw~~~~~~~~~~~~~gh~~ 551 (552)
++|-++=+.+...+.. |...|.++.|-|.. ++++|.|+.|+-||-+ +...++.+.||.+
T Consensus 575 KiWGLdFGDCHKS~fA-----HdDSvm~V~F~P~~~~FFt~gKD~kvKqWDg~-kFe~iq~L~~H~~ 635 (888)
T KOG0306|consen 575 KIWGLDFGDCHKSFFA-----HDDSVMSVQFLPKTHLFFTCGKDGKVKQWDGE-KFEEIQKLDGHHS 635 (888)
T ss_pred EEeccccchhhhhhhc-----ccCceeEEEEcccceeEEEecCcceEEeechh-hhhhheeeccchh
Confidence 9999987777665544 37779999999743 8999999999999988 7888999999863
No 57
>KOG0282 consensus mRNA splicing factor [Function unknown]
Probab=99.96 E-value=3.2e-28 Score=226.56 Aligned_cols=267 Identities=18% Similarity=0.278 Sum_probs=212.5
Q ss_pred CCccccceeeec-CcceEEEeeCCCeEEEEE----------eecCccceEEEEEc--CCEEEEEeCCCcEEEEeCCCCeE
Q 008820 218 DGADIDQARAAG-GVKDLVNGLSKGNVKFKD----------LQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSH 284 (552)
Q Consensus 218 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~----------l~~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~~~ 284 (552)
+...+.++.+-+ .+..+++++.++.+.+|+ |.||..+|.+++|+ |..++|+|.|+.|++||+++|++
T Consensus 213 H~kgvsai~~fp~~~hLlLS~gmD~~vklW~vy~~~~~lrtf~gH~k~Vrd~~~s~~g~~fLS~sfD~~lKlwDtETG~~ 292 (503)
T KOG0282|consen 213 HTKGVSAIQWFPKKGHLLLSGGMDGLVKLWNVYDDRRCLRTFKGHRKPVRDASFNNCGTSFLSASFDRFLKLWDTETGQV 292 (503)
T ss_pred CccccchhhhccceeeEEEecCCCceEEEEEEecCcceehhhhcchhhhhhhhccccCCeeeeeecceeeeeeccccceE
Confidence 334456666666 666777888888888886 57899999999999 99999999999999999999999
Q ss_pred EEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcE
Q 008820 285 VHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTI 364 (552)
Q Consensus 285 ~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i 364 (552)
+..+. -...++++.|.|++.+++++|+.|+.|+.||+++++..+ .+..+-. ... -..|-+++..+++.+.|+++
T Consensus 293 ~~~f~-~~~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiRs~kvvq---eYd~hLg-~i~-~i~F~~~g~rFissSDdks~ 366 (503)
T KOG0282|consen 293 LSRFH-LDKVPTCVKFHPDNQNIFLVGGSDKKIRQWDIRSGKVVQ---EYDRHLG-AIL-DITFVDEGRRFISSSDDKSV 366 (503)
T ss_pred EEEEe-cCCCceeeecCCCCCcEEEEecCCCcEEEEeccchHHHH---HHHhhhh-hee-eeEEccCCceEeeeccCccE
Confidence 99986 346789999999999999999999999999999876333 2222221 111 23566788899999999999
Q ss_pred EEEECCCCceeEEec-CCCCCeEEEEEe--CCEEEEEeCCCcEEEEECCCC---ceeEEEecCCCCceEEEEEEcCCCCE
Q 008820 365 KAWSLLDGTLSCTMS-GHKSAVSTLAVC--NGVLYSGSRDGTIRLWSLSDH---SLLTVLEEDSSGAVSSVLSLTAVQHT 438 (552)
Q Consensus 365 ~iwd~~~~~~~~~~~-~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~---~~~~~~~~~~~~~~~~~~~~s~~~~~ 438 (552)
++|+.+..-++.... .+.-...|+..+ ++.+++-+.|+.|.++.+... .....+.+|......+-+.|||||++
T Consensus 367 riWe~~~~v~ik~i~~~~~hsmP~~~~~P~~~~~~aQs~dN~i~ifs~~~~~r~nkkK~feGh~vaGys~~v~fSpDG~~ 446 (503)
T KOG0282|consen 367 RIWENRIPVPIKNIADPEMHTMPCLTLHPNGKWFAAQSMDNYIAIFSTVPPFRLNKKKRFEGHSVAGYSCQVDFSPDGRT 446 (503)
T ss_pred EEEEcCCCccchhhcchhhccCcceecCCCCCeehhhccCceEEEEecccccccCHhhhhcceeccCceeeEEEcCCCCe
Confidence 999998876665432 222234466666 559999999999999987543 23345566655555566899999999
Q ss_pred EEEEECCCcEEEEeCC--cceeeeecccceEEEEEe---cCCEEEEEeCCCeEEEEe
Q 008820 439 LVVSHESGSIKVWRND--KFMKSMQTHKGSVFAVFL---EGKWLFTGGWDKTVSVQE 490 (552)
Q Consensus 439 l~~g~~dg~i~iwd~~--~~~~~~~~h~~~v~~v~~---~~~~l~sgs~dg~i~iwd 490 (552)
|++|+.||.+.+||.+ +.+..++.|..++..+.| ....+|+++.||.|++||
T Consensus 447 l~SGdsdG~v~~wdwkt~kl~~~lkah~~~ci~v~wHP~e~Skvat~~w~G~Ikiwd 503 (503)
T KOG0282|consen 447 LCSGDSDGKVNFWDWKTTKLVSKLKAHDQPCIGVDWHPVEPSKVATCGWDGLIKIWD 503 (503)
T ss_pred EEeecCCccEEEeechhhhhhhccccCCcceEEEEecCCCcceeEecccCceeEecC
Confidence 9999999999999965 578899999999999998 567899999999999996
No 58
>KOG0292 consensus Vesicle coat complex COPI, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.96 E-value=3.6e-27 Score=233.70 Aligned_cols=262 Identities=19% Similarity=0.310 Sum_probs=206.8
Q ss_pred cccceeeecCcceEEEeeCCCeEEEEE---------eecCccceEEEEEc--CCEEEEEeCCCcEEEEeCCCCeEEEEEe
Q 008820 221 DIDQARAAGGVKDLVNGLSKGNVKFKD---------LQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFK 289 (552)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---------l~~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~~~~~~~~ 289 (552)
.+....|.+...-++++...|.+++|+ |.+|.++|+.++|+ +.+++||+.|.+|+||++++.+++.++.
T Consensus 11 RvKglsFHP~rPwILtslHsG~IQlWDYRM~tli~rFdeHdGpVRgv~FH~~qplFVSGGDDykIkVWnYk~rrclftL~ 90 (1202)
T KOG0292|consen 11 RVKGLSFHPKRPWILTSLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVDFHPTQPLFVSGGDDYKIKVWNYKTRRCLFTLL 90 (1202)
T ss_pred cccceecCCCCCEEEEeecCceeeeehhhhhhHHhhhhccCCccceeeecCCCCeEEecCCccEEEEEecccceehhhhc
Confidence 355667777788889999999999998 57899999999999 8999999999999999999999999999
Q ss_pred CCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEEC
Q 008820 290 GHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSL 369 (552)
Q Consensus 290 ~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~ 369 (552)
||-+.|..+.|++.-. .++++|.|.+|+||++.+.++ +....+|. |..-+..|+|..+.++++|-|.+|++||+
T Consensus 91 GHlDYVRt~~FHheyP-WIlSASDDQTIrIWNwqsr~~---iavltGHn--HYVMcAqFhptEDlIVSaSLDQTVRVWDi 164 (1202)
T KOG0292|consen 91 GHLDYVRTVFFHHEYP-WILSASDDQTIRIWNWQSRKC---IAVLTGHN--HYVMCAQFHPTEDLIVSASLDQTVRVWDI 164 (1202)
T ss_pred cccceeEEeeccCCCc-eEEEccCCCeEEEEeccCCce---EEEEecCc--eEEEeeccCCccceEEEecccceEEEEee
Confidence 9999999999998555 789999999999999987654 44444444 55667789999999999999999999998
Q ss_pred CCC-----------------------------ceeEEecCCCCCeEEEEEeC--CEEEEEeCCCcEEEEECCCCc--eeE
Q 008820 370 LDG-----------------------------TLSCTMSGHKSAVSTLAVCN--GVLYSGSRDGTIRLWSLSDHS--LLT 416 (552)
Q Consensus 370 ~~~-----------------------------~~~~~~~~h~~~v~~l~~~~--~~l~s~~~dg~i~iwd~~~~~--~~~ 416 (552)
..- -..+.+.||...|+-++|++ .++++|+.|..|++|.+...+ .+-
T Consensus 165 sGLRkk~~~pg~~e~~~~~~~~~~dLfg~~DaVVK~VLEGHDRGVNwaAfhpTlpliVSG~DDRqVKlWrmnetKaWEvD 244 (1202)
T KOG0292|consen 165 SGLRKKNKAPGSLEDQMRGQQGNSDLFGQTDAVVKHVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVD 244 (1202)
T ss_pred cchhccCCCCCCchhhhhccccchhhcCCcCeeeeeeecccccccceEEecCCcceEEecCCcceeeEEEeccccceeeh
Confidence 421 12235689999999999996 499999999999999987654 244
Q ss_pred EEecCCCCceEEEEEEcCCCCEEEEEECCCcEEEEeCC--cceeeeecccce--EEEEEecCCEEEEEeCCCeEEEEec
Q 008820 417 VLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRND--KFMKSMQTHKGS--VFAVFLEGKWLFTGGWDKTVSVQEL 491 (552)
Q Consensus 417 ~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~--~~~~~~~~h~~~--v~~v~~~~~~l~sgs~dg~i~iwd~ 491 (552)
+..+| .+.+.+ +-|+|..+++++.++|++|++||+. +.+++++..... +.+..|..+++++|- |+-+.+|.+
T Consensus 245 tcrgH-~nnVss-vlfhp~q~lIlSnsEDksirVwDm~kRt~v~tfrrendRFW~laahP~lNLfAAgH-DsGm~VFkl 320 (1202)
T KOG0292|consen 245 TCRGH-YNNVSS-VLFHPHQDLILSNSEDKSIRVWDMTKRTSVQTFRRENDRFWILAAHPELNLFAAGH-DSGMIVFKL 320 (1202)
T ss_pred hhhcc-cCCcce-EEecCccceeEecCCCccEEEEecccccceeeeeccCCeEEEEEecCCcceeeeec-CCceEEEEE
Confidence 44555 455666 5789999999999999999999964 567777543333 333334555554443 444444444
No 59
>KOG0640 consensus mRNA cleavage stimulating factor complex; subunit 1 [RNA processing and modification]
Probab=99.96 E-value=9e-28 Score=211.35 Aligned_cols=284 Identities=14% Similarity=0.241 Sum_probs=229.7
Q ss_pred EEeecCccceEEEEEc--CCEEEEEeCCCcEEEEeCCC------------------CeEEEEEeCCCCCeEEEEEecCCC
Q 008820 246 KDLQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKD------------------FSHVHTFKGHDHKVMAVVYVDEDQ 305 (552)
Q Consensus 246 ~~l~~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~------------------~~~~~~~~~h~~~v~~v~~~~~~~ 305 (552)
..+..|+.++++-+|+ |.+++||+.|.+|+|.|++. .-.++++..|.++|+++.|+|. +
T Consensus 106 ~ylt~HK~~cR~aafs~DG~lvATGsaD~SIKildvermlaks~~~em~~~~~qa~hPvIRTlYDH~devn~l~FHPr-e 184 (430)
T KOG0640|consen 106 KYLTSHKSPCRAAAFSPDGSLVATGSADASIKILDVERMLAKSKPKEMISGDTQARHPVIRTLYDHVDEVNDLDFHPR-E 184 (430)
T ss_pred EEEeecccceeeeeeCCCCcEEEccCCcceEEEeehhhhhhhcchhhhccCCcccCCceEeehhhccCcccceeecch-h
Confidence 3477899999999999 99999999999999999861 1346788899999999999995 5
Q ss_pred CEEEEEcCCCcEEEEeCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCceeEEe---cCCC
Q 008820 306 PLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTM---SGHK 382 (552)
Q Consensus 306 ~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~---~~h~ 382 (552)
.+|++|+.|++|+++|+......+.++.+.... .....+|+|.|.++++|....++++||+++.++...- ..|.
T Consensus 185 ~ILiS~srD~tvKlFDfsK~saKrA~K~~qd~~---~vrsiSfHPsGefllvgTdHp~~rlYdv~T~QcfvsanPd~qht 261 (430)
T KOG0640|consen 185 TILISGSRDNTVKLFDFSKTSAKRAFKVFQDTE---PVRSISFHPSGEFLLVGTDHPTLRLYDVNTYQCFVSANPDDQHT 261 (430)
T ss_pred heEEeccCCCeEEEEecccHHHHHHHHHhhccc---eeeeEeecCCCceEEEecCCCceeEEeccceeEeeecCcccccc
Confidence 589999999999999998766666666555433 3345688999999999999999999999998876543 5699
Q ss_pred CCeEEEEEe--CCEEEEEeCCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEECCCcEEEEeCC--ccee
Q 008820 383 SAVSTLAVC--NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRND--KFMK 458 (552)
Q Consensus 383 ~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~--~~~~ 458 (552)
+.|+++.++ +++.++++.||.|++||--+++++.++...|.+...+...|..+++++++.+.|..+++|.+. .++.
T Consensus 262 ~ai~~V~Ys~t~~lYvTaSkDG~IklwDGVS~rCv~t~~~AH~gsevcSa~Ftkn~kyiLsSG~DS~vkLWEi~t~R~l~ 341 (430)
T KOG0640|consen 262 GAITQVRYSSTGSLYVTASKDGAIKLWDGVSNRCVRTIGNAHGGSEVCSAVFTKNGKYILSSGKDSTVKLWEISTGRMLK 341 (430)
T ss_pred cceeEEEecCCccEEEEeccCCcEEeeccccHHHHHHHHhhcCCceeeeEEEccCCeEEeecCCcceeeeeeecCCceEE
Confidence 999999999 458899999999999999999999999988888888888999999999999999999999954 5666
Q ss_pred eeeccc--ceE---EEEEe--cCCEEEEEeC-CCeEEEEecCCCeeeeeeccCCCcccCcceEEEEEeCCe--EEEEeCC
Q 008820 459 SMQTHK--GSV---FAVFL--EGKWLFTGGW-DKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQGK--LFVGCAD 528 (552)
Q Consensus 459 ~~~~h~--~~v---~~v~~--~~~~l~sgs~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~--l~s~s~D 528 (552)
.+.+-. +.. +...| ...+++.-.+ .+.+.-||.++........ ..|.+.+..+..+|.. +++|+.|
T Consensus 342 ~YtGAg~tgrq~~rtqAvFNhtEdyVl~pDEas~slcsWdaRtadr~~l~s----lgHn~a~R~i~HSP~~p~FmTcsdD 417 (430)
T KOG0640|consen 342 EYTGAGTTGRQKHRTQAVFNHTEDYVLFPDEASNSLCSWDARTADRVALLS----LGHNGAVRWIVHSPVEPAFMTCSDD 417 (430)
T ss_pred EEecCCcccchhhhhhhhhcCccceEEccccccCceeeccccchhhhhhcc----cCCCCCceEEEeCCCCCceeeeccc
Confidence 665531 111 12234 4566666554 4789999999875544332 2247889999998754 9999999
Q ss_pred CeEEEEEec
Q 008820 529 RTVKIALCN 537 (552)
Q Consensus 529 g~v~iw~~~ 537 (552)
-..|+|--.
T Consensus 418 ~raRFWyrr 426 (430)
T KOG0640|consen 418 FRARFWYRR 426 (430)
T ss_pred ceeeeeeec
Confidence 999999754
No 60
>KOG0313 consensus Microtubule binding protein YTM1 (contains WD40 repeats) [Cytoskeleton]
Probab=99.96 E-value=1.2e-26 Score=209.82 Aligned_cols=254 Identities=23% Similarity=0.360 Sum_probs=199.7
Q ss_pred cceEEEeeCCCeEEEEE--------eecCccceEEEEEc-----CCEEEEEeCCCcEEEEeCCCCeE----EEEEeCCCC
Q 008820 231 VKDLVNGLSKGNVKFKD--------LQGHRDCVTGLAVG-----GGFLFSSSFDKSIHVWSLKDFSH----VHTFKGHDH 293 (552)
Q Consensus 231 ~~~~~~~~~~~~~~~~~--------l~~H~~~V~~l~~s-----~~~l~s~s~dg~I~iwd~~~~~~----~~~~~~h~~ 293 (552)
.+.++++..+|..++|+ +.||.++|.++++. ...|++++.|.++++|.++.+.. ++.-+||..
T Consensus 115 ~~~IltgsYDg~~riWd~~Gk~~~~~~Ght~~ik~v~~v~~n~~~~~fvsas~Dqtl~Lw~~~~~~~~~~~~~~~~GHk~ 194 (423)
T KOG0313|consen 115 SKWILTGSYDGTSRIWDLKGKSIKTIVGHTGPIKSVAWVIKNSSSCLFVSASMDQTLRLWKWNVGENKVKALKVCRGHKR 194 (423)
T ss_pred CceEEEeecCCeeEEEecCCceEEEEecCCcceeeeEEEecCCccceEEEecCCceEEEEEecCchhhhhHHhHhccccc
Confidence 67889999999999887 46799999999886 34699999999999999987654 333459999
Q ss_pred CeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCC----------------------CCccccccccCCCceeeeEEEEeeC
Q 008820 294 KVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPL----------------------GHEPLKKWNEEKDWRYSGIHALTTS 351 (552)
Q Consensus 294 ~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~----------------------~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (552)
.|-+|...+++. .+++|+.|.+|++|+..... ...++..+.+| ..++.++-+.
T Consensus 195 ~V~sVsv~~sgt-r~~SgS~D~~lkiWs~~~~~~~~~E~~s~~rrk~~~~~~~~~~r~P~vtl~GH----t~~Vs~V~w~ 269 (423)
T KOG0313|consen 195 SVDSVSVDSSGT-RFCSGSWDTMLKIWSVETDEEDELESSSNRRRKKQKREKEGGTRTPLVTLEGH----TEPVSSVVWS 269 (423)
T ss_pred ceeEEEecCCCC-eEEeecccceeeecccCCCccccccccchhhhhhhhhhhcccccCceEEeccc----ccceeeEEEc
Confidence 999999888655 77999999999999943211 00111122222 2233344433
Q ss_pred -CCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe--CCEEEEEeCCCcEEEEECCCCc---eeEEEecCCCCc
Q 008820 352 -GRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC--NGVLYSGSRDGTIRLWSLSDHS---LLTVLEEDSSGA 425 (552)
Q Consensus 352 -~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~---~~~~~~~~~~~~ 425 (552)
...+++++.|.+|+.||+.++..+.++.+ ...++|+.++ ..+|++|+.|..|++||.+++. ..+++.+| .+.
T Consensus 270 d~~v~yS~SwDHTIk~WDletg~~~~~~~~-~ksl~~i~~~~~~~Ll~~gssdr~irl~DPR~~~gs~v~~s~~gH-~nw 347 (423)
T KOG0313|consen 270 DATVIYSVSWDHTIKVWDLETGGLKSTLTT-NKSLNCISYSPLSKLLASGSSDRHIRLWDPRTGDGSVVSQSLIGH-KNW 347 (423)
T ss_pred CCCceEeecccceEEEEEeecccceeeeec-CcceeEeecccccceeeecCCCCceeecCCCCCCCceeEEeeecc-hhh
Confidence 55899999999999999999999988874 5568999998 4599999999999999999864 34555555 456
Q ss_pred eEEEEEEcCC-CCEEEEEECCCcEEEEeCCc---ceeeeecccceEEEEEe-cCCEEEEEeCCCeEEEEecC
Q 008820 426 VSSVLSLTAV-QHTLVVSHESGSIKVWRNDK---FMKSMQTHKGSVFAVFL-EGKWLFTGGWDKTVSVQELA 492 (552)
Q Consensus 426 ~~~~~~~s~~-~~~l~~g~~dg~i~iwd~~~---~~~~~~~h~~~v~~v~~-~~~~l~sgs~dg~i~iwd~~ 492 (552)
+.. +.++|. ..+|++|+.|+++++||.+. ++..+.+|...|.++.| ++..+++||.|++|+++.-.
T Consensus 348 Vss-vkwsp~~~~~~~S~S~D~t~klWDvRS~k~plydI~~h~DKvl~vdW~~~~~IvSGGaD~~l~i~~~~ 418 (423)
T KOG0313|consen 348 VSS-VKWSPTNEFQLVSGSYDNTVKLWDVRSTKAPLYDIAGHNDKVLSVDWNEGGLIVSGGADNKLRIFKGS 418 (423)
T ss_pred hhh-eecCCCCceEEEEEecCCeEEEEEeccCCCcceeeccCCceEEEEeccCCceEEeccCcceEEEeccc
Confidence 666 466665 56788999999999999774 67788999999999999 67799999999999998654
No 61
>KOG0275 consensus Conserved WD40 repeat-containing protein [General function prediction only]
Probab=99.96 E-value=3.7e-28 Score=214.87 Aligned_cols=276 Identities=18% Similarity=0.273 Sum_probs=224.8
Q ss_pred cCccceEEEEEc--CCEEEEEeCCCcEEEEeCCCCeEEEEE--------eCCCCCeEEEEEecCCCCEEEEEcCCCcEEE
Q 008820 250 GHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTF--------KGHDHKVMAVVYVDEDQPLCISGDSGGGIFV 319 (552)
Q Consensus 250 ~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~~~~~~~--------~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~v 319 (552)
|...-+.|..|+ |++|++|+.||-|.+||..+|+..+.+ --+..+|.|+.|+.+.+ ++++|+.||.|++
T Consensus 211 g~KSh~EcA~FSPDgqyLvsgSvDGFiEVWny~~GKlrKDLkYQAqd~fMMmd~aVlci~FSRDsE-MlAsGsqDGkIKv 289 (508)
T KOG0275|consen 211 GQKSHVECARFSPDGQYLVSGSVDGFIEVWNYTTGKLRKDLKYQAQDNFMMMDDAVLCISFSRDSE-MLASGSQDGKIKV 289 (508)
T ss_pred ccccchhheeeCCCCceEeeccccceeeeehhccchhhhhhhhhhhcceeecccceEEEeecccHH-HhhccCcCCcEEE
Confidence 445667889999 999999999999999999999876544 34788999999998665 7899999999999
Q ss_pred EeCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe--CCEEEE
Q 008820 320 WSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC--NGVLYS 397 (552)
Q Consensus 320 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s 397 (552)
|.+.++.+...+.. .+. ....+..|+.|+..+++++.|.++++.-+.+|++++.+++|++.|+...|. ++.+++
T Consensus 290 Wri~tG~ClRrFdr---AHt-kGvt~l~FSrD~SqiLS~sfD~tvRiHGlKSGK~LKEfrGHsSyvn~a~ft~dG~~iis 365 (508)
T KOG0275|consen 290 WRIETGQCLRRFDR---AHT-KGVTCLSFSRDNSQILSASFDQTVRIHGLKSGKCLKEFRGHSSYVNEATFTDDGHHIIS 365 (508)
T ss_pred EEEecchHHHHhhh---hhc-cCeeEEEEccCcchhhcccccceEEEeccccchhHHHhcCccccccceEEcCCCCeEEE
Confidence 99998865544432 222 122345778888899999999999999999999999999999999999999 349999
Q ss_pred EeCCCcEEEEECCCCceeEEEecCC-CCceEEEEEEcCCCCEEEEEECCCcEEEEeCC-cceeeeecc----cceEE-EE
Q 008820 398 GSRDGTIRLWSLSDHSLLTVLEEDS-SGAVSSVLSLTAVQHTLVVSHESGSIKVWRND-KFMKSMQTH----KGSVF-AV 470 (552)
Q Consensus 398 ~~~dg~i~iwd~~~~~~~~~~~~~~-~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~-~~~~~~~~h----~~~v~-~v 470 (552)
++.||+|++|+..+.+++.+++... .-.+.+++-+..+...++++...++|+|.++. +.++.+..- ..-|. ++
T Consensus 366 aSsDgtvkvW~~KtteC~~Tfk~~~~d~~vnsv~~~PKnpeh~iVCNrsntv~imn~qGQvVrsfsSGkREgGdFi~~~l 445 (508)
T KOG0275|consen 366 ASSDGTVKVWHGKTTECLSTFKPLGTDYPVNSVILLPKNPEHFIVCNRSNTVYIMNMQGQVVRSFSSGKREGGDFINAIL 445 (508)
T ss_pred ecCCccEEEecCcchhhhhhccCCCCcccceeEEEcCCCCceEEEEcCCCeEEEEeccceEEeeeccCCccCCceEEEEe
Confidence 9999999999999999999987543 33455666777778899999999999999964 455665431 12343 45
Q ss_pred EecCCEEEEEeCCCeEEEEecCCCeeeeeeccCCCcccCcceEEEEEeC--CeEEEEeCCCeEEEEE
Q 008820 471 FLEGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQ--GKLFVGCADRTVKIAL 535 (552)
Q Consensus 471 ~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~~--~~l~s~s~Dg~v~iw~ 535 (552)
++.|.++++.++|+.++.|.+.++++......+ ...+..++.+| +.+++-+.||.+++|.
T Consensus 446 SpkGewiYcigED~vlYCF~~~sG~LE~tl~Vh-----EkdvIGl~HHPHqNllAsYsEDgllKLWk 507 (508)
T KOG0275|consen 446 SPKGEWIYCIGEDGVLYCFSVLSGKLERTLPVH-----EKDVIGLTHHPHQNLLASYSEDGLLKLWK 507 (508)
T ss_pred cCCCcEEEEEccCcEEEEEEeecCceeeeeecc-----cccccccccCcccchhhhhcccchhhhcC
Confidence 679999999999999999999999887765543 44577788776 4599999999999996
No 62
>KOG0300 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.96 E-value=9.3e-27 Score=205.52 Aligned_cols=301 Identities=21% Similarity=0.345 Sum_probs=223.4
Q ss_pred ceEEEeeCCCeEE---EEEeecCccceEEEEEc--CCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCC
Q 008820 232 KDLVNGLSKGNVK---FKDLQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQP 306 (552)
Q Consensus 232 ~~~~~~~~~~~~~---~~~l~~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~~~~~~~~~h~~~v~~v~~~~~~~~ 306 (552)
.++++.+.++.+. ++.|.||.+.|+.++.. ...+.+++.|.+.+||.+++++|+.++.||.+.|++++|++.+ .
T Consensus 125 srivssFk~~t~~~~lvre~~GHkDGiW~Vaa~~tqpi~gtASADhTA~iWs~Esg~CL~~Y~GH~GSVNsikfh~s~-~ 203 (481)
T KOG0300|consen 125 SRIVSSFKDGTVKFRLVRELEGHKDGIWHVAADSTQPICGTASADHTARIWSLESGACLATYTGHTGSVNSIKFHNSG-L 203 (481)
T ss_pred chheeeecCCceeEeehhhhcccccceeeehhhcCCcceeecccccceeEEeeccccceeeecccccceeeEEecccc-c
Confidence 4456666677644 35689999999999987 6789999999999999999999999999999999999999854 5
Q ss_pred EEEEEcCCCcEEEEeCC----CCCCC--c------ccccccc---------CCC------------ceeeeEEE--EeeC
Q 008820 307 LCISGDSGGGIFVWSFS----FPLGH--E------PLKKWNE---------EKD------------WRYSGIHA--LTTS 351 (552)
Q Consensus 307 ~l~s~~~dg~i~vwd~~----~~~~~--~------~~~~~~~---------~~~------------~~~~~~~~--~~~~ 351 (552)
++++++.|++..||... .++.. . ....... ..+ .+...+.+ +-..
T Consensus 204 L~lTaSGD~taHIW~~av~~~vP~~~a~~~hSsEeE~e~sDe~~~d~d~~~~sD~~tiRvPl~~ltgH~~vV~a~dWL~g 283 (481)
T KOG0300|consen 204 LLLTASGDETAHIWKAAVNWEVPSNNAPSDHSSEEEEEHSDEHNRDTDSSEKSDGHTIRVPLMRLTGHRAVVSACDWLAG 283 (481)
T ss_pred eEEEccCCcchHHHHHhhcCcCCCCCCCCCCCchhhhhcccccccccccccccCCceeeeeeeeeeccccceEehhhhcC
Confidence 88999999999999621 11100 0 0000000 000 01111112 2235
Q ss_pred CCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEeCC--EEEEEeCCCcEEEEECCCCc-eeEEEecCCCCceEE
Q 008820 352 GRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVCNG--VLYSGSRDGTIRLWSLSDHS-LLTVLEEDSSGAVSS 428 (552)
Q Consensus 352 ~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~--~l~s~~~dg~i~iwd~~~~~-~~~~~~~~~~~~~~~ 428 (552)
++.+++++.|.+-.+||+++++++..+.+|....+.++-++. ++++++.|.+.++||++..- .+..|.+|. ..+.+
T Consensus 284 g~Q~vTaSWDRTAnlwDVEtge~v~~LtGHd~ELtHcstHptQrLVvTsSrDtTFRLWDFReaI~sV~VFQGHt-dtVTS 362 (481)
T KOG0300|consen 284 GQQMVTASWDRTANLWDVETGEVVNILTGHDSELTHCSTHPTQRLVVTSSRDTTFRLWDFREAIQSVAVFQGHT-DTVTS 362 (481)
T ss_pred cceeeeeeccccceeeeeccCceeccccCcchhccccccCCcceEEEEeccCceeEeccchhhcceeeeecccc-cceeE
Confidence 779999999999999999999999999999999998888843 88999999999999998543 456666664 44555
Q ss_pred EEEEcCCCCEEEEEECCCcEEEEeCCc---ceeeeecccceEEEEEe--cCCEEEEEeCCCeEEEEecCCCeeeeeeccC
Q 008820 429 VLSLTAVQHTLVVSHESGSIKVWRNDK---FMKSMQTHKGSVFAVFL--EGKWLFTGGWDKTVSVQELAGDEFEEDVIPT 503 (552)
Q Consensus 429 ~~~~s~~~~~l~~g~~dg~i~iwd~~~---~~~~~~~h~~~v~~v~~--~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~ 503 (552)
..|..+ ..+++|+.|.+|++||+++ ++.++.. ..+++.+.. .+..++.--.+..|++||+++.++..... .
T Consensus 363 -~vF~~d-d~vVSgSDDrTvKvWdLrNMRsplATIRt-dS~~NRvavs~g~~iIAiPhDNRqvRlfDlnG~RlaRlPr-t 438 (481)
T KOG0300|consen 363 -VVFNTD-DRVVSGSDDRTVKVWDLRNMRSPLATIRT-DSPANRVAVSKGHPIIAIPHDNRQVRLFDLNGNRLARLPR-T 438 (481)
T ss_pred -EEEecC-CceeecCCCceEEEeeeccccCcceeeec-CCccceeEeecCCceEEeccCCceEEEEecCCCccccCCc-c
Confidence 356554 4689999999999999765 4555543 455665554 45577777777899999999876654332 1
Q ss_pred CCcccCcceEEEEEeCCe----EEEEeCCCeEEEEEecC
Q 008820 504 GAIPCGSVITALLYWQGK----LFVGCADRTVKIALCNR 538 (552)
Q Consensus 504 ~~~~~~~~v~~l~~~~~~----l~s~s~Dg~v~iw~~~~ 538 (552)
....+...|++++|.+.. |++++.|..+.=|+++.
T Consensus 439 sRqgHrRMV~c~AW~eehp~cnLftcGFDR~v~gW~in~ 477 (481)
T KOG0300|consen 439 SRQGHRRMVTCCAWLEEHPACNLFTCGFDRMVAGWKINT 477 (481)
T ss_pred cccccceeeeeeeccccCcccccccccccceeeeeEecc
Confidence 222346779999999543 99999999999999984
No 63
>KOG0294 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.95 E-value=2e-26 Score=203.66 Aligned_cols=241 Identities=19% Similarity=0.331 Sum_probs=199.1
Q ss_pred EEEEEeecCccceEEEEEcCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeC
Q 008820 243 VKFKDLQGHRDCVTGLAVGGGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSF 322 (552)
Q Consensus 243 ~~~~~l~~H~~~V~~l~~s~~~l~s~s~dg~I~iwd~~~~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~ 322 (552)
.+++.+..|.++|++++.++.++||||.|-+|+|||+.+...+..+-.|.+.|+++.|.++-.
T Consensus 34 ~~lF~~~aH~~sitavAVs~~~~aSGssDetI~IYDm~k~~qlg~ll~HagsitaL~F~~~~S----------------- 96 (362)
T KOG0294|consen 34 KPLFAFSAHAGSITALAVSGPYVASGSSDETIHIYDMRKRKQLGILLSHAGSITALKFYPPLS----------------- 96 (362)
T ss_pred eccccccccccceeEEEecceeEeccCCCCcEEEEeccchhhhcceeccccceEEEEecCCcc-----------------
Confidence 357889999999999999999999999999999999999999999999999999999976421
Q ss_pred CCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe--CCEEEEEeC
Q 008820 323 SFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC--NGVLYSGSR 400 (552)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~ 400 (552)
.+.|++|+.||.|.+|+.....++..+++|.+.|+.++.+ +.+.++.+.
T Consensus 97 -----------------------------~shLlS~sdDG~i~iw~~~~W~~~~slK~H~~~Vt~lsiHPS~KLALsVg~ 147 (362)
T KOG0294|consen 97 -----------------------------KSHLLSGSDDGHIIIWRVGSWELLKSLKAHKGQVTDLSIHPSGKLALSVGG 147 (362)
T ss_pred -----------------------------hhheeeecCCCcEEEEEcCCeEEeeeecccccccceeEecCCCceEEEEcC
Confidence 1268999999999999999999999999999999999999 347789999
Q ss_pred CCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEECCCcEEEEeCCc--ceeeeecccceEEEEEe-cCCEE
Q 008820 401 DGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDK--FMKSMQTHKGSVFAVFL-EGKWL 477 (552)
Q Consensus 401 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~~--~~~~~~~h~~~v~~v~~-~~~~l 477 (552)
|+.++.||+-+|+.-......+. ...+.|+|.|.+++.+..+ .|-+|.+.. ....+.. ...+.++.| ++..|
T Consensus 148 D~~lr~WNLV~Gr~a~v~~L~~~---at~v~w~~~Gd~F~v~~~~-~i~i~q~d~A~v~~~i~~-~~r~l~~~~l~~~~L 222 (362)
T KOG0294|consen 148 DQVLRTWNLVRGRVAFVLNLKNK---ATLVSWSPQGDHFVVSGRN-KIDIYQLDNASVFREIEN-PKRILCATFLDGSEL 222 (362)
T ss_pred CceeeeehhhcCccceeeccCCc---ceeeEEcCCCCEEEEEecc-EEEEEecccHhHhhhhhc-cccceeeeecCCceE
Confidence 99999999999987777665433 2236899999999888776 588997653 2222222 255677777 89999
Q ss_pred EEEeCCCeEEEEecCCCeeeeeeccCCCcccCcceEEEEEeC----CeEEEEeCCCeEEEEEecCC
Q 008820 478 FTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQ----GKLFVGCADRTVKIALCNRQ 539 (552)
Q Consensus 478 ~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~~----~~l~s~s~Dg~v~iw~~~~~ 539 (552)
++|+.|+.|.+||.++......+.. |...|-++.+-. .+|+++|+||.|++||++..
T Consensus 223 ~vG~d~~~i~~~D~ds~~~~~~~~A-----H~~RVK~i~~~~~~~~~~lvTaSSDG~I~vWd~~~~ 283 (362)
T KOG0294|consen 223 LVGGDNEWISLKDTDSDTPLTEFLA-----HENRVKDIASYTNPEHEYLVTASSDGFIKVWDIDME 283 (362)
T ss_pred EEecCCceEEEeccCCCccceeeec-----chhheeeeEEEecCCceEEEEeccCceEEEEEcccc
Confidence 9999999999999998655554444 377788888553 25999999999999999854
No 64
>KOG0301 consensus Phospholipase A2-activating protein (contains WD40 repeats) [Lipid transport and metabolism]
Probab=99.95 E-value=1.9e-26 Score=223.47 Aligned_cols=273 Identities=25% Similarity=0.424 Sum_probs=220.5
Q ss_pred EEEeecCccceEEEEEc-CCEEEEEeCCCcEEEEeCCCCeEE--EEEeCCCCCeEE-EEEecCCCCEEEEEcCCCcEEEE
Q 008820 245 FKDLQGHRDCVTGLAVG-GGFLFSSSFDKSIHVWSLKDFSHV--HTFKGHDHKVMA-VVYVDEDQPLCISGDSGGGIFVW 320 (552)
Q Consensus 245 ~~~l~~H~~~V~~l~~s-~~~l~s~s~dg~I~iwd~~~~~~~--~~~~~h~~~v~~-v~~~~~~~~~l~s~~~dg~i~vw 320 (552)
-+.+.||..-|..+++. +..++++|.||++++|+-...+.+ ..+.+|.+-|.. +++.+.++..+++|+.|++|.+|
T Consensus 7 s~~l~gH~~DVr~v~~~~~~~i~s~sRd~t~~vw~~~~~~~l~~~~~~~~~g~i~~~i~y~e~~~~~l~~g~~D~~i~v~ 86 (745)
T KOG0301|consen 7 SHELEGHKSDVRAVAVTDGVCIISGSRDGTVKVWAKKGKQYLETHAFEGPKGFIANSICYAESDKGRLVVGGMDTTIIVF 86 (745)
T ss_pred EEEeccCccchheeEecCCeEEeecCCCCceeeeeccCcccccceecccCcceeeccceeccccCcceEeecccceEEEE
Confidence 35689999999999988 788999999999999997655544 456778888877 88877566678999999999999
Q ss_pred eCCCCCCCccccccccCCCceeeeEEEEeeCCC-EEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe-CCEEEEE
Q 008820 321 SFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGR-YLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC-NGVLYSG 398 (552)
Q Consensus 321 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~-~~~l~s~ 398 (552)
...... ++..+.+|+ ..+++++.... .+++||.|.++++|- .+++...+.+|+..|.+++.- ++.++||
T Consensus 87 ~~~~~~---P~~~LkgH~----snVC~ls~~~~~~~iSgSWD~TakvW~--~~~l~~~l~gH~asVWAv~~l~e~~~vTg 157 (745)
T KOG0301|consen 87 KLSQAE---PLYTLKGHK----SNVCSLSIGEDGTLISGSWDSTAKVWR--IGELVYSLQGHTASVWAVASLPENTYVTG 157 (745)
T ss_pred ecCCCC---chhhhhccc----cceeeeecCCcCceEecccccceEEec--chhhhcccCCcchheeeeeecCCCcEEec
Confidence 988654 444444433 34666764433 589999999999996 467777899999999999887 6699999
Q ss_pred eCCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEECCCcEEEEeC-CcceeeeecccceEEEEEe--cCC
Q 008820 399 SRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRN-DKFMKSMQTHKGSVFAVFL--EGK 475 (552)
Q Consensus 399 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~-~~~~~~~~~h~~~v~~v~~--~~~ 475 (552)
|.|.+|++|.- ++.++++.+| ...+.. +++-+++ .+++++.||.|+.|++ +..+..+.+|++-+++++. ++.
T Consensus 158 saDKtIklWk~--~~~l~tf~gH-tD~VRg-L~vl~~~-~flScsNDg~Ir~w~~~ge~l~~~~ghtn~vYsis~~~~~~ 232 (745)
T KOG0301|consen 158 SADKTIKLWKG--GTLLKTFSGH-TDCVRG-LAVLDDS-HFLSCSNDGSIRLWDLDGEVLLEMHGHTNFVYSISMALSDG 232 (745)
T ss_pred cCcceeeeccC--Cchhhhhccc-hhheee-eEEecCC-CeEeecCCceEEEEeccCceeeeeeccceEEEEEEecCCCC
Confidence 99999999974 7888999986 455555 4555543 5889999999999997 7889999999999999984 899
Q ss_pred EEEEEeCCCeEEEEecCCCeeeeeeccCCCcccCcceEEEEEe-CCeEEEEeCCCeEEEEEecC
Q 008820 476 WLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYW-QGKLFVGCADRTVKIALCNR 538 (552)
Q Consensus 476 ~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~-~~~l~s~s~Dg~v~iw~~~~ 538 (552)
.++++++|++++||+.. .+.+.+... ...|.++.+- ++.+++|++||.||||..+.
T Consensus 233 ~Ivs~gEDrtlriW~~~--e~~q~I~lP-----ttsiWsa~~L~NgDIvvg~SDG~VrVfT~~k 289 (745)
T KOG0301|consen 233 LIVSTGEDRTLRIWKKD--ECVQVITLP-----TTSIWSAKVLLNGDIVVGGSDGRVRVFTVDK 289 (745)
T ss_pred eEEEecCCceEEEeecC--ceEEEEecC-----ccceEEEEEeeCCCEEEeccCceEEEEEecc
Confidence 99999999999999987 454444443 3346666655 78899999999999999873
No 65
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=99.95 E-value=1.7e-25 Score=214.09 Aligned_cols=263 Identities=30% Similarity=0.475 Sum_probs=217.8
Q ss_pred ccccceeeecCcceEEEeeCCCeEEEEEe---------ecCccceEEEEEc--CCEEEEEeCCCcEEEEeCCCCeEEEEE
Q 008820 220 ADIDQARAAGGVKDLVNGLSKGNVKFKDL---------QGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTF 288 (552)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l---------~~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~~~~~~~ 288 (552)
..+..+.+.+.+..++++..++.+.+|++ .+|...+..+.|+ ++++++++.||.|++||+.+++.+..+
T Consensus 10 ~~i~~~~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~~~~~~~~~~~~ 89 (289)
T cd00200 10 GGVTCVAFSPDGKLLATGSGDGTIKVWDLETGELLRTLKGHTGPVRDVAASADGTYLASGSSDKTIRLWDLETGECVRTL 89 (289)
T ss_pred CCEEEEEEcCCCCEEEEeecCcEEEEEEeeCCCcEEEEecCCcceeEEEECCCCCEEEEEcCCCeEEEEEcCcccceEEE
Confidence 45777888888888888888888888864 5688899999998 679999999999999999998888999
Q ss_pred eCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEE
Q 008820 289 KGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWS 368 (552)
Q Consensus 289 ~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd 368 (552)
..|...+.++.|+++ ..++++++.|+.+++||+.+.+....+. .+.. ......+++++.++++++.|+.|++||
T Consensus 90 ~~~~~~i~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~---~~~~--~i~~~~~~~~~~~l~~~~~~~~i~i~d 163 (289)
T cd00200 90 TGHTSYVSSVAFSPD-GRILSSSSRDKTIKVWDVETGKCLTTLR---GHTD--WVNSVAFSPDGTFVASSSQDGTIKLWD 163 (289)
T ss_pred eccCCcEEEEEEcCC-CCEEEEecCCCeEEEEECCCcEEEEEec---cCCC--cEEEEEEcCcCCEEEEEcCCCcEEEEE
Confidence 999999999999987 4577888889999999998554333322 2211 123346677777888888899999999
Q ss_pred CCCCceeEEecCCCCCeEEEEEe-CC-EEEEEeCCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEECCC
Q 008820 369 LLDGTLSCTMSGHKSAVSTLAVC-NG-VLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESG 446 (552)
Q Consensus 369 ~~~~~~~~~~~~h~~~v~~l~~~-~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg 446 (552)
+++++.+..+..|...+.++.|+ ++ .+++++.|+.|++||+++++.+..+..+. ..+.. +.+++++.++++++.||
T Consensus 164 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~~~~~~~~~~~~-~~i~~-~~~~~~~~~~~~~~~~~ 241 (289)
T cd00200 164 LRTGKCVATLTGHTGEVNSVAFSPDGEKLLSSSSDGTIKLWDLSTGKCLGTLRGHE-NGVNS-VAFSPDGYLLASGSEDG 241 (289)
T ss_pred ccccccceeEecCccccceEEECCCcCEEEEecCCCcEEEEECCCCceecchhhcC-CceEE-EEEcCCCcEEEEEcCCC
Confidence 99999999999999999999999 33 89999999999999999988888775543 34444 68999988888888899
Q ss_pred cEEEEeCC--cceeeeecccceEEEEEe--cCCEEEEEeCCCeEEEEe
Q 008820 447 SIKVWRND--KFMKSMQTHKGSVFAVFL--EGKWLFTGGWDKTVSVQE 490 (552)
Q Consensus 447 ~i~iwd~~--~~~~~~~~h~~~v~~v~~--~~~~l~sgs~dg~i~iwd 490 (552)
.|++||.. +....+..|...+.++.+ ++.+|++++.||.+++|+
T Consensus 242 ~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iw~ 289 (289)
T cd00200 242 TIRVWDLRTGECVQTLSGHTNSVTSLAWSPDGKRLASGSADGTIRIWD 289 (289)
T ss_pred cEEEEEcCCceeEEEccccCCcEEEEEECCCCCEEEEecCCCeEEecC
Confidence 99999965 566777889999999887 668999999999999996
No 66
>KOG0277 consensus Peroxisomal targeting signal type 2 receptor [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.95 E-value=6.7e-27 Score=200.54 Aligned_cols=235 Identities=19% Similarity=0.326 Sum_probs=191.8
Q ss_pred cCccceEEEEEc---CCEEEEEeCCCcEEEEeCC-CCeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCC
Q 008820 250 GHRDCVTGLAVG---GGFLFSSSFDKSIHVWSLK-DFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFP 325 (552)
Q Consensus 250 ~H~~~V~~l~~s---~~~l~s~s~dg~I~iwd~~-~~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~ 325 (552)
.-.+.+..++|+ .+.+++++.||++++||+. ...+++.++.|...|.++.|++.....+++++.|++|++|+...+
T Consensus 58 d~~D~LfdV~Wse~~e~~~~~a~GDGSLrl~d~~~~s~Pi~~~kEH~~EV~Svdwn~~~r~~~ltsSWD~TiKLW~~~r~ 137 (311)
T KOG0277|consen 58 DTEDGLFDVAWSENHENQVIAASGDGSLRLFDLTMPSKPIHKFKEHKREVYSVDWNTVRRRIFLTSSWDGTIKLWDPNRP 137 (311)
T ss_pred ecccceeEeeecCCCcceEEEEecCceEEEeccCCCCcchhHHHhhhhheEEeccccccceeEEeeccCCceEeecCCCC
Confidence 346789999998 7899999999999999964 346789999999999999999988888999999999999998755
Q ss_pred CCCccccccccCCCceeeeEEEEee-CCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe---CCEEEEEeCC
Q 008820 326 LGHEPLKKWNEEKDWRYSGIHALTT-SGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC---NGVLYSGSRD 401 (552)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~---~~~l~s~~~d 401 (552)
+ .+.++.++...... ..++| .++.++++|.|+++++||++..-....+..|...+.|+.|+ ++.++||+.|
T Consensus 138 ~---Sv~Tf~gh~~~Iy~--a~~sp~~~nlfas~Sgd~~l~lwdvr~~gk~~~i~ah~~Eil~cdw~ky~~~vl~Tg~vd 212 (311)
T KOG0277|consen 138 N---SVQTFNGHNSCIYQ--AAFSPHIPNLFASASGDGTLRLWDVRSPGKFMSIEAHNSEILCCDWSKYNHNVLATGGVD 212 (311)
T ss_pred c---ceEeecCCccEEEE--EecCCCCCCeEEEccCCceEEEEEecCCCceeEEEeccceeEeecccccCCcEEEecCCC
Confidence 4 44555555442222 24555 47799999999999999998654444588999999999998 5599999999
Q ss_pred CcEEEEECCCCc-eeEEEecCCCCceEEEEEEcCC-CCEEEEEECCCcEEEEeCC---cceeeeecccceEEEEEe---c
Q 008820 402 GTIRLWSLSDHS-LLTVLEEDSSGAVSSVLSLTAV-QHTLVVSHESGSIKVWRND---KFMKSMQTHKGSVFAVFL---E 473 (552)
Q Consensus 402 g~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~s~~-~~~l~~g~~dg~i~iwd~~---~~~~~~~~h~~~v~~v~~---~ 473 (552)
+.|+.||+++.+ ++..+.+| .-.+.. +.+||. ...|++++.|-+++|||.. ..+.+...|+.-+..+.| +
T Consensus 213 ~~vr~wDir~~r~pl~eL~gh-~~AVRk-vk~Sph~~~lLaSasYDmT~riw~~~~~ds~~e~~~~HtEFv~g~Dws~~~ 290 (311)
T KOG0277|consen 213 NLVRGWDIRNLRTPLFELNGH-GLAVRK-VKFSPHHASLLASASYDMTVRIWDPERQDSAIETVDHHTEFVCGLDWSLFD 290 (311)
T ss_pred ceEEEEehhhccccceeecCC-ceEEEE-EecCcchhhHhhhccccceEEecccccchhhhhhhhccceEEecccccccc
Confidence 999999999865 56666544 334444 578876 4688999999999999954 356777889999998887 8
Q ss_pred CCEEEEEeCCCeEEEEec
Q 008820 474 GKWLFTGGWDKTVSVQEL 491 (552)
Q Consensus 474 ~~~l~sgs~dg~i~iwd~ 491 (552)
+.++++.+.|+.++||+.
T Consensus 291 ~~~vAs~gWDe~l~Vw~p 308 (311)
T KOG0277|consen 291 PGQVASTGWDELLYVWNP 308 (311)
T ss_pred Cceeeecccccceeeecc
Confidence 899999999999999984
No 67
>KOG0643 consensus Translation initiation factor 3, subunit i (eIF-3i)/TGF-beta receptor-interacting protein (TRIP-1) [Translation, ribosomal structure and biogenesis; Signal transduction mechanisms]
Probab=99.95 E-value=5.2e-26 Score=196.47 Aligned_cols=284 Identities=15% Similarity=0.198 Sum_probs=212.2
Q ss_pred EeecCccceEEEEEc--CCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCC
Q 008820 247 DLQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSF 324 (552)
Q Consensus 247 ~l~~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~ 324 (552)
-++||+.+++.+.|+ |++|.||+.|.+..||-..+|+.+-++.||++.|.++....+ ...+++|+.|.++++||+.+
T Consensus 5 ~l~GHERplTqiKyN~eGDLlFscaKD~~~~vw~s~nGerlGty~GHtGavW~~Did~~-s~~liTGSAD~t~kLWDv~t 83 (327)
T KOG0643|consen 5 LLQGHERPLTQIKYNREGDLLFSCAKDSTPTVWYSLNGERLGTYDGHTGAVWCCDIDWD-SKHLITGSADQTAKLWDVET 83 (327)
T ss_pred ccccCccccceEEecCCCcEEEEecCCCCceEEEecCCceeeeecCCCceEEEEEecCC-cceeeeccccceeEEEEcCC
Confidence 378999999999999 999999999999999999999999999999999999998664 45789999999999999998
Q ss_pred CCCCccccccccCCCceeeeEEEEeeCCCEEEEeeC-----CCcEEEEECC-------CCceeEEecCCCCCeEEEEEe-
Q 008820 325 PLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSG-----DRTIKAWSLL-------DGTLSCTMSGHKSAVSTLAVC- 391 (552)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~-----dg~i~iwd~~-------~~~~~~~~~~h~~~v~~l~~~- 391 (552)
++.....+.. .......|+++|++++.... .+.|.++|++ ..++...+..+.+.++.+.|.
T Consensus 84 Gk~la~~k~~------~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI~t~~skit~a~Wg~ 157 (327)
T KOG0643|consen 84 GKQLATWKTN------SPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKIPTPDSKITSALWGP 157 (327)
T ss_pred CcEEEEeecC------CeeEEEeeccCCcEEEEEehhhcCcceEEEEEEccCChhhhcccCceEEecCCccceeeeeecc
Confidence 8655444332 22234578889997777654 4679999998 446788888889999999998
Q ss_pred -CCEEEEEeCCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEECCCcEEEEeCCcc--eeeeecccceEE
Q 008820 392 -NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDKF--MKSMQTHKGSVF 468 (552)
Q Consensus 392 -~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~~~--~~~~~~h~~~v~ 468 (552)
+..|++|..||.|.+||+++++.+..-...|...+.. +.++++..++++++.|.+-++||...+ ++++. -..+|+
T Consensus 158 l~~~ii~Ghe~G~is~~da~~g~~~v~s~~~h~~~Ind-~q~s~d~T~FiT~s~Dttakl~D~~tl~v~Kty~-te~PvN 235 (327)
T KOG0643|consen 158 LGETIIAGHEDGSISIYDARTGKELVDSDEEHSSKIND-LQFSRDRTYFITGSKDTTAKLVDVRTLEVLKTYT-TERPVN 235 (327)
T ss_pred cCCEEEEecCCCcEEEEEcccCceeeechhhhcccccc-ccccCCcceEEecccCccceeeeccceeeEEEee-eccccc
Confidence 6799999999999999999987655544444445555 799999999999999999999997753 44443 345666
Q ss_pred EEE--ecCCEEEEEe-CCC-eEEEEecCCCeeeeeecc-------CCCcccCcceEEEEEeCC-e-EEEEeCCCeEEEEE
Q 008820 469 AVF--LEGKWLFTGG-WDK-TVSVQELAGDEFEEDVIP-------TGAIPCGSVITALLYWQG-K-LFVGCADRTVKIAL 535 (552)
Q Consensus 469 ~v~--~~~~~l~sgs-~dg-~i~iwd~~~~~~~~~~~~-------~~~~~~~~~v~~l~~~~~-~-l~s~s~Dg~v~iw~ 535 (552)
+.+ |...+++.|+ .+- -|.-=+.+.++....+.+ ..-..|-++|++++|+|+ . .++|+.||.||+.-
T Consensus 236 ~aaisP~~d~VilgGGqeA~dVTTT~~r~GKFEArFyh~i~eEEigrvkGHFGPINsvAfhPdGksYsSGGEDG~VR~h~ 315 (327)
T KOG0643|consen 236 TAAISPLLDHVILGGGQEAMDVTTTSTRAGKFEARFYHLIFEEEIGRVKGHFGPINSVAFHPDGKSYSSGGEDGYVRLHH 315 (327)
T ss_pred ceecccccceEEecCCceeeeeeeecccccchhhhHHHHHHHHHhccccccccCcceeEECCCCcccccCCCCceEEEEE
Confidence 654 4444555444 331 122112222222111100 011124678999999974 3 88999999999998
Q ss_pred ecCC
Q 008820 536 CNRQ 539 (552)
Q Consensus 536 ~~~~ 539 (552)
++.+
T Consensus 316 Fd~~ 319 (327)
T KOG0643|consen 316 FDSN 319 (327)
T ss_pred eccc
Confidence 7743
No 68
>PTZ00421 coronin; Provisional
Probab=99.95 E-value=6.5e-25 Score=221.17 Aligned_cols=271 Identities=13% Similarity=0.189 Sum_probs=192.4
Q ss_pred CCEEEEEeCCCcEEEEeCCCCeEE-------------EEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCC
Q 008820 262 GGFLFSSSFDKSIHVWSLKDFSHV-------------HTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGH 328 (552)
Q Consensus 262 ~~~l~s~s~dg~I~iwd~~~~~~~-------------~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~ 328 (552)
+..+++++.+.....|+...+..+ ..+.+|.+.|.+++|+|.++.+|++|+.|++|++||+......
T Consensus 32 ~~~~~~~n~~~~a~~w~~~gg~~v~~~~~~G~~~~~~~~l~GH~~~V~~v~fsP~d~~~LaSgS~DgtIkIWdi~~~~~~ 111 (493)
T PTZ00421 32 CSNTIACNDRFIAVPWQQLGSTAVLKHTDYGKLASNPPILLGQEGPIIDVAFNPFDPQKLFTASEDGTIMGWGIPEEGLT 111 (493)
T ss_pred CCCcEeECCceEEEEEecCCceEEeeccccccCCCCCceEeCCCCCEEEEEEcCCCCCEEEEEeCCCEEEEEecCCCccc
Confidence 456666666666666765433222 2467899999999999966668999999999999999764321
Q ss_pred ----ccccccccCCCceeeeEEEEeeCC-CEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe--CCEEEEEeCC
Q 008820 329 ----EPLKKWNEEKDWRYSGIHALTTSG-RYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC--NGVLYSGSRD 401 (552)
Q Consensus 329 ----~~~~~~~~~~~~~~~~~~~~~~~~-~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~d 401 (552)
..+..+..+.. .....+|+|++ ++|++|+.|++|++||+++++.+..+.+|...|.+++|+ +.+|++++.|
T Consensus 112 ~~~~~~l~~L~gH~~--~V~~l~f~P~~~~iLaSgs~DgtVrIWDl~tg~~~~~l~~h~~~V~sla~spdG~lLatgs~D 189 (493)
T PTZ00421 112 QNISDPIVHLQGHTK--KVGIVSFHPSAMNVLASAGADMVVNVWDVERGKAVEVIKCHSDQITSLEWNLDGSLLCTTSKD 189 (493)
T ss_pred cccCcceEEecCCCC--cEEEEEeCcCCCCEEEEEeCCCEEEEEECCCCeEEEEEcCCCCceEEEEEECCCCEEEEecCC
Confidence 22333444332 22345677765 699999999999999999999999999999999999999 3489999999
Q ss_pred CcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEE----CCCcEEEEeCCcc---eeeeecccc-eEEEEE--
Q 008820 402 GTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSH----ESGSIKVWRNDKF---MKSMQTHKG-SVFAVF-- 471 (552)
Q Consensus 402 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~----~dg~i~iwd~~~~---~~~~~~h~~-~v~~v~-- 471 (552)
++|++||+++++.+..+..+....... +.|.+++..+++++ .|+.|++||+++. ......+.. .+....
T Consensus 190 g~IrIwD~rsg~~v~tl~~H~~~~~~~-~~w~~~~~~ivt~G~s~s~Dr~VklWDlr~~~~p~~~~~~d~~~~~~~~~~d 268 (493)
T PTZ00421 190 KKLNIIDPRDGTIVSSVEAHASAKSQR-CLWAKRKDLIITLGCSKSQQRQIMLWDTRKMASPYSTVDLDQSSALFIPFFD 268 (493)
T ss_pred CEEEEEECCCCcEEEEEecCCCCcceE-EEEcCCCCeEEEEecCCCCCCeEEEEeCCCCCCceeEeccCCCCceEEEEEc
Confidence 999999999999988887764333333 46777777777654 4789999998753 333333332 333333
Q ss_pred ecCCEEEEEe-CCCeEEEEecCCCeeeeeeccCCCcccCcceEEEEEeCCeEEEEeCCCeEEEEEecCC
Q 008820 472 LEGKWLFTGG-WDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQGKLFVGCADRTVKIALCNRQ 539 (552)
Q Consensus 472 ~~~~~l~sgs-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~l~s~s~Dg~v~iw~~~~~ 539 (552)
+++++|++++ .|+.|++||+.++........ ....++..+++.|.+.+-...--..|++.+..+
T Consensus 269 ~d~~~L~lggkgDg~Iriwdl~~~~~~~~~~~----~s~~~~~g~~~~pk~~~dv~~~Ei~r~~~l~~~ 333 (493)
T PTZ00421 269 EDTNLLYIGSKGEGNIRCFELMNERLTFCSSY----SSVEPHKGLCMMPKWSLDTRKCEIARFYALTYH 333 (493)
T ss_pred CCCCEEEEEEeCCCeEEEEEeeCCceEEEeec----cCCCCCcceEecccccccccceeeeEEEEecCC
Confidence 3888888887 599999999998765544322 124457777787765443333334466666543
No 69
>PTZ00420 coronin; Provisional
Probab=99.95 E-value=7e-25 Score=221.75 Aligned_cols=248 Identities=11% Similarity=0.124 Sum_probs=183.8
Q ss_pred EeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCC-----ccccccccCCCcee
Q 008820 268 SSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGH-----EPLKKWNEEKDWRY 342 (552)
Q Consensus 268 ~s~dg~I~iwd~~~~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~-----~~~~~~~~~~~~~~ 342 (552)
|+.++.|++|+......+..+.+|.+.|.+++|+|....+|++|+.|++|++||+.+.... ..+..+..+.. .
T Consensus 50 GG~~gvI~L~~~~r~~~v~~L~gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH~~--~ 127 (568)
T PTZ00420 50 GGLIGAIRLENQMRKPPVIKLKGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGHKK--K 127 (568)
T ss_pred CCceeEEEeeecCCCceEEEEcCCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCccccccccceEEeecCCC--c
Confidence 6678899999988888889999999999999999987779999999999999999864321 11122223322 2
Q ss_pred eeEEEEeeCCC-EEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe--CCEEEEEeCCCcEEEEECCCCceeEEEe
Q 008820 343 SGIHALTTSGR-YLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC--NGVLYSGSRDGTIRLWSLSDHSLLTVLE 419 (552)
Q Consensus 343 ~~~~~~~~~~~-~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 419 (552)
....+|+|++. .+++++.|++|++||+++++.+..+. |...|.+++|+ +.+|++++.|+.|++||+++++.+..+.
T Consensus 128 V~sVaf~P~g~~iLaSgS~DgtIrIWDl~tg~~~~~i~-~~~~V~SlswspdG~lLat~s~D~~IrIwD~Rsg~~i~tl~ 206 (568)
T PTZ00420 128 ISIIDWNPMNYYIMCSSGFDSFVNIWDIENEKRAFQIN-MPKKLSSLKWNIKGNLLSGTCVGKHMHIIDPRKQEIASSFH 206 (568)
T ss_pred EEEEEECCCCCeEEEEEeCCCeEEEEECCCCcEEEEEe-cCCcEEEEEECCCCCEEEEEecCCEEEEEECCCCcEEEEEe
Confidence 23457778776 46799999999999999998887776 66789999999 4488889999999999999999998888
Q ss_pred cCCCCceEEE---EEEcCCCCEEEEEECCC----cEEEEeCCc---ceeeeec--ccceEEEE-Ee-cCCEEEEEeCCCe
Q 008820 420 EDSSGAVSSV---LSLTAVQHTLVVSHESG----SIKVWRNDK---FMKSMQT--HKGSVFAV-FL-EGKWLFTGGWDKT 485 (552)
Q Consensus 420 ~~~~~~~~~~---~~~s~~~~~l~~g~~dg----~i~iwd~~~---~~~~~~~--h~~~v~~v-~~-~~~~l~sgs~dg~ 485 (552)
.|.......+ ..+++++.++++++.|+ .|+|||++. ++..+.. +.+.+... .. ++.++++|+.|++
T Consensus 207 gH~g~~~s~~v~~~~fs~d~~~IlTtG~d~~~~R~VkLWDlr~~~~pl~~~~ld~~~~~L~p~~D~~tg~l~lsGkGD~t 286 (568)
T PTZ00420 207 IHDGGKNTKNIWIDGLGGDDNYILSTGFSKNNMREMKLWDLKNTTSALVTMSIDNASAPLIPHYDESTGLIYLIGKGDGN 286 (568)
T ss_pred cccCCceeEEEEeeeEcCCCCEEEEEEcCCCCccEEEEEECCCCCCceEEEEecCCccceEEeeeCCCCCEEEEEECCCe
Confidence 7753322221 23568889999988774 799999764 4443332 22333222 22 5889999999999
Q ss_pred EEEEecCCCeeeeeeccCCCcccCcceEEEEEeCCeE
Q 008820 486 VSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQGKL 522 (552)
Q Consensus 486 i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~l 522 (552)
|++|++..+.+... . ...+..++.+++|.|.+.
T Consensus 287 Ir~~e~~~~~~~~l-~---~~~s~~p~~g~~f~Pkr~ 319 (568)
T PTZ00420 287 CRYYQHSLGSIRKV-N---EYKSCSPFRSFGFLPKQI 319 (568)
T ss_pred EEEEEccCCcEEee-c---ccccCCCccceEEccccc
Confidence 99999987643222 1 122366788889988654
No 70
>KOG0278 consensus Serine/threonine kinase receptor-associated protein [Lipid transport and metabolism]
Probab=99.95 E-value=4.5e-27 Score=201.00 Aligned_cols=258 Identities=19% Similarity=0.309 Sum_probs=210.9
Q ss_pred ecCcceEEEeeCCCeEEE---------EEeecCccceEEEEEc--CCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeE
Q 008820 228 AGGVKDLVNGLSKGNVKF---------KDLQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVM 296 (552)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~---------~~l~~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~~~~~~~~~h~~~v~ 296 (552)
.+.+-.+++...++..-+ -+|.||.++|++...+ ....++++.|-+-+|||.-+|..+++|. |..-|.
T Consensus 26 tp~g~flisa~kd~~pmlr~g~tgdwigtfeghkgavw~~~l~~na~~aasaaadftakvw~a~tgdelhsf~-hkhivk 104 (334)
T KOG0278|consen 26 TPDGYFLISASKDGKPMLRNGDTGDWIGTFEGHKGAVWSATLNKNATRAASAAADFTAKVWDAVTGDELHSFE-HKHIVK 104 (334)
T ss_pred CCCceEEEEeccCCCchhccCCCCCcEEeeeccCcceeeeecCchhhhhhhhcccchhhhhhhhhhhhhhhhh-hhheee
Confidence 456677777777766544 4599999999999998 6678899999999999999999999986 889999
Q ss_pred EEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCceeE
Q 008820 297 AVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSC 376 (552)
Q Consensus 297 ~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~ 376 (552)
+++|+.+.+ .|++|+.+..++++|++.+.. +...+.++.... ..+ -|....+.|++.+.|++|++||.+++..++
T Consensus 105 ~~af~~ds~-~lltgg~ekllrvfdln~p~A--pp~E~~ghtg~I-r~v-~wc~eD~~iLSSadd~tVRLWD~rTgt~v~ 179 (334)
T KOG0278|consen 105 AVAFSQDSN-YLLTGGQEKLLRVFDLNRPKA--PPKEISGHTGGI-RTV-LWCHEDKCILSSADDKTVRLWDHRTGTEVQ 179 (334)
T ss_pred eEEecccch-hhhccchHHHhhhhhccCCCC--CchhhcCCCCcc-eeE-EEeccCceEEeeccCCceEEEEeccCcEEE
Confidence 999988655 679999999999999986543 233333333322 222 344455678888999999999999999999
Q ss_pred EecCCCCCeEEEEEe-CCEEEEEeCCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEECCCcEEEEeC--
Q 008820 377 TMSGHKSAVSTLAVC-NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRN-- 453 (552)
Q Consensus 377 ~~~~h~~~v~~l~~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~-- 453 (552)
++. ...+|+++.++ ++.+++-...+.|.+||..+...++.++.+. .+.+ .+++|+...+++|++|..++.||.
T Consensus 180 sL~-~~s~VtSlEvs~dG~ilTia~gssV~Fwdaksf~~lKs~k~P~--nV~S-ASL~P~k~~fVaGged~~~~kfDy~T 255 (334)
T KOG0278|consen 180 SLE-FNSPVTSLEVSQDGRILTIAYGSSVKFWDAKSFGLLKSYKMPC--NVES-ASLHPKKEFFVAGGEDFKVYKFDYNT 255 (334)
T ss_pred EEe-cCCCCcceeeccCCCEEEEecCceeEEeccccccceeeccCcc--cccc-ccccCCCceEEecCcceEEEEEeccC
Confidence 987 56789999999 7889999999999999999999999888753 3444 588999999999999999999984
Q ss_pred Ccceeee-ecccceEEEEEe--cCCEEEEEeCCCeEEEEecCCCe
Q 008820 454 DKFMKSM-QTHKGSVFAVFL--EGKWLFTGGWDKTVSVQELAGDE 495 (552)
Q Consensus 454 ~~~~~~~-~~h~~~v~~v~~--~~~~l~sgs~dg~i~iwd~~~~~ 495 (552)
+..+..+ ++|-++|.|+.| +|...++||.||+|++|.+.-++
T Consensus 256 geEi~~~nkgh~gpVhcVrFSPdGE~yAsGSEDGTirlWQt~~~~ 300 (334)
T KOG0278|consen 256 GEEIGSYNKGHFGPVHCVRFSPDGELYASGSEDGTIRLWQTTPGK 300 (334)
T ss_pred CceeeecccCCCCceEEEEECCCCceeeccCCCceEEEEEecCCC
Confidence 4455554 899999999987 99999999999999999986543
No 71
>KOG0288 consensus WD40 repeat protein TipD [General function prediction only]
Probab=99.95 E-value=8.6e-27 Score=212.86 Aligned_cols=276 Identities=18% Similarity=0.260 Sum_probs=222.0
Q ss_pred EEEeecCccceEEEEEc--CCEEEEEeCCCcEEEEeCCCCe--EEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEE
Q 008820 245 FKDLQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFS--HVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVW 320 (552)
Q Consensus 245 ~~~l~~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~~--~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vw 320 (552)
...+..|.+.|..+.|- ...|++|+.|..|++|+....+ .+.++.+..++|+++.|.+++. .+++++.|+.+++|
T Consensus 168 ~~~ld~h~gev~~v~~l~~sdtlatgg~Dr~Ik~W~v~~~k~~~~~tLaGs~g~it~~d~d~~~~-~~iAas~d~~~r~W 246 (459)
T KOG0288|consen 168 LFVLDAHEGEVHDVEFLRNSDTLATGGSDRIIKLWNVLGEKSELISTLAGSLGNITSIDFDSDNK-HVIAASNDKNLRLW 246 (459)
T ss_pred hhhhhccccccceeEEccCcchhhhcchhhhhhhhhcccchhhhhhhhhccCCCcceeeecCCCc-eEEeecCCCceeee
Confidence 45578999999999998 5899999999999999987766 6788889999999999988655 66888999999999
Q ss_pred eCCCCCCCccccccccCCCceeeeEEEE--eeCCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEeCCEEEEE
Q 008820 321 SFSFPLGHEPLKKWNEEKDWRYSGIHAL--TTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVCNGVLYSG 398 (552)
Q Consensus 321 d~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~ 398 (552)
+++.......+. +|.+ .+++. ......+++|+.|.+|++||+....+.+++. ..+.+..|...+..+++|
T Consensus 247 nvd~~r~~~TLs---GHtd----kVt~ak~~~~~~~vVsgs~DRtiK~WDl~k~~C~kt~l-~~S~cnDI~~~~~~~~Sg 318 (459)
T KOG0288|consen 247 NVDSLRLRHTLS---GHTD----KVTAAKFKLSHSRVVSGSADRTIKLWDLQKAYCSKTVL-PGSQCNDIVCSISDVISG 318 (459)
T ss_pred eccchhhhhhhc---cccc----ceeeehhhccccceeeccccchhhhhhhhhhheecccc-ccccccceEecceeeeec
Confidence 999765444443 3333 22233 2333359999999999999999988887765 345677777777789999
Q ss_pred eCCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEECCCcEEEEeCCc--ceeeee------cccceEEEE
Q 008820 399 SRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDK--FMKSMQ------THKGSVFAV 470 (552)
Q Consensus 399 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~~--~~~~~~------~h~~~v~~v 470 (552)
..|++||+||.++..+......+ +.+.+ +..++++..+.+++.|.++.+.|++. ..+.+. +|.-.-..+
T Consensus 319 H~DkkvRfwD~Rs~~~~~sv~~g--g~vtS-l~ls~~g~~lLsssRDdtl~viDlRt~eI~~~~sA~g~k~asDwtrvvf 395 (459)
T KOG0288|consen 319 HFDKKVRFWDIRSADKTRSVPLG--GRVTS-LDLSMDGLELLSSSRDDTLKVIDLRTKEIRQTFSAEGFKCASDWTRVVF 395 (459)
T ss_pred ccccceEEEeccCCceeeEeecC--cceee-EeeccCCeEEeeecCCCceeeeecccccEEEEeeccccccccccceeEE
Confidence 99999999999999999888775 44555 69999999999999999999999764 233332 233333455
Q ss_pred EecCCEEEEEeCCCeEEEEecCCCeeeeeeccCCCcccCcceEEEEEeC--CeEEEEeCCCeEEEEE
Q 008820 471 FLEGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQ--GKLFVGCADRTVKIAL 535 (552)
Q Consensus 471 ~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~~--~~l~s~s~Dg~v~iw~ 535 (552)
+|++.|+++||.||.|+||++.++++......... ...|++++|++ ..+++++.++.+.+|.
T Consensus 396 Spd~~YvaAGS~dgsv~iW~v~tgKlE~~l~~s~s---~~aI~s~~W~~sG~~Llsadk~~~v~lW~ 459 (459)
T KOG0288|consen 396 SPDGSYVAAGSADGSVYIWSVFTGKLEKVLSLSTS---NAAITSLSWNPSGSGLLSADKQKAVTLWT 459 (459)
T ss_pred CCCCceeeeccCCCcEEEEEccCceEEEEeccCCC---CcceEEEEEcCCCchhhcccCCcceEecC
Confidence 67999999999999999999999998877666543 44799999995 3499999999999994
No 72
>KOG0288 consensus WD40 repeat protein TipD [General function prediction only]
Probab=99.95 E-value=9.4e-27 Score=212.58 Aligned_cols=262 Identities=17% Similarity=0.299 Sum_probs=213.3
Q ss_pred CccccceeeecCcceEEEeeCCCeEEEEEee-----------cCccceEEEEEc--CCEEEEEeCCCcEEEEeCCCCeEE
Q 008820 219 GADIDQARAAGGVKDLVNGLSKGNVKFKDLQ-----------GHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHV 285 (552)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-----------~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~~~~ 285 (552)
...+..+.+..+...+.++..+..+++|... |-.++|+++.|. ++++++++.|+.+++|++.+.+..
T Consensus 175 ~gev~~v~~l~~sdtlatgg~Dr~Ik~W~v~~~k~~~~~tLaGs~g~it~~d~d~~~~~~iAas~d~~~r~Wnvd~~r~~ 254 (459)
T KOG0288|consen 175 EGEVHDVEFLRNSDTLATGGSDRIIKLWNVLGEKSELISTLAGSLGNITSIDFDSDNKHVIAASNDKNLRLWNVDSLRLR 254 (459)
T ss_pred ccccceeEEccCcchhhhcchhhhhhhhhcccchhhhhhhhhccCCCcceeeecCCCceEEeecCCCceeeeeccchhhh
Confidence 3456777888888889999999999988754 445679999998 999999999999999999999999
Q ss_pred EEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEE
Q 008820 286 HTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIK 365 (552)
Q Consensus 286 ~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~ 365 (552)
.++.+|++.|+++.|..... .+++|+.|.+|++||+....+.+.+.... .+..+...+..+++|..|+.|+
T Consensus 255 ~TLsGHtdkVt~ak~~~~~~-~vVsgs~DRtiK~WDl~k~~C~kt~l~~S--------~cnDI~~~~~~~~SgH~DkkvR 325 (459)
T KOG0288|consen 255 HTLSGHTDKVTAAKFKLSHS-RVVSGSADRTIKLWDLQKAYCSKTVLPGS--------QCNDIVCSISDVISGHFDKKVR 325 (459)
T ss_pred hhhcccccceeeehhhcccc-ceeeccccchhhhhhhhhhheeccccccc--------cccceEecceeeeecccccceE
Confidence 99999999999999976444 38999999999999998754443332221 1222333356789999999999
Q ss_pred EEECCCCceeEEecCCCCCeEEEEEe-CC-EEEEEeCCCcEEEEECCCCceeEEEecCC--CCceEEEEEEcCCCCEEEE
Q 008820 366 AWSLLDGTLSCTMSGHKSAVSTLAVC-NG-VLYSGSRDGTIRLWSLSDHSLLTVLEEDS--SGAVSSVLSLTAVQHTLVV 441 (552)
Q Consensus 366 iwd~~~~~~~~~~~~h~~~v~~l~~~-~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~--~~~~~~~~~~s~~~~~l~~ 441 (552)
+||.++..+......+. .|+++..+ ++ .+++++.|.++.+.|+++.+..+.+.... .+.-.+...|||++.|+++
T Consensus 326 fwD~Rs~~~~~sv~~gg-~vtSl~ls~~g~~lLsssRDdtl~viDlRt~eI~~~~sA~g~k~asDwtrvvfSpd~~YvaA 404 (459)
T KOG0288|consen 326 FWDIRSADKTRSVPLGG-RVTSLDLSMDGLELLSSSRDDTLKVIDLRTKEIRQTFSAEGFKCASDWTRVVFSPDGSYVAA 404 (459)
T ss_pred EEeccCCceeeEeecCc-ceeeEeeccCCeEEeeecCCCceeeeecccccEEEEeeccccccccccceeEECCCCceeee
Confidence 99999999999998766 89999998 44 88888999999999999999888876532 1222334689999999999
Q ss_pred EECCCcEEEEeC--Ccceeeeecccc--eEEEEEe--cCCEEEEEeCCCeEEEEe
Q 008820 442 SHESGSIKVWRN--DKFMKSMQTHKG--SVFAVFL--EGKWLFTGGWDKTVSVQE 490 (552)
Q Consensus 442 g~~dg~i~iwd~--~~~~~~~~~h~~--~v~~v~~--~~~~l~sgs~dg~i~iwd 490 (552)
|+.||.|+||+. +++...+..... .|++++| .|..|++++.++.+.+|.
T Consensus 405 GS~dgsv~iW~v~tgKlE~~l~~s~s~~aI~s~~W~~sG~~Llsadk~~~v~lW~ 459 (459)
T KOG0288|consen 405 GSADGSVYIWSVFTGKLEKVLSLSTSNAAITSLSWNPSGSGLLSADKQKAVTLWT 459 (459)
T ss_pred ccCCCcEEEEEccCceEEEEeccCCCCcceEEEEEcCCCchhhcccCCcceEecC
Confidence 999999999994 456666655443 5999998 789999999999999993
No 73
>KOG0289 consensus mRNA splicing factor [General function prediction only]
Probab=99.95 E-value=2.5e-25 Score=204.43 Aligned_cols=265 Identities=19% Similarity=0.267 Sum_probs=217.0
Q ss_pred ccceeeecCcceEEEeeCCCeEEE---------EEeecCccceEEEEEc--CCEEEEEeCCCcEEEEeCCCCeEEEEEeC
Q 008820 222 IDQARAAGGVKDLVNGLSKGNVKF---------KDLQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKG 290 (552)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~---------~~l~~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~~~~~~~~~ 290 (552)
+.+....+....++++..+.+..+ ..|+||...|+.+.|+ ...+++++.|..|+||.............
T Consensus 222 i~ald~~~s~~~ilTGG~d~~av~~d~~s~q~l~~~~Gh~kki~~v~~~~~~~~v~~aSad~~i~vws~~~~s~~~~~~~ 301 (506)
T KOG0289|consen 222 ITALDIIPSSSKILTGGEDKTAVLFDKPSNQILATLKGHTKKITSVKFHKDLDTVITASADEIIRVWSVPLSSEPTSSRP 301 (506)
T ss_pred eeEEeecCCCCcceecCCCCceEEEecchhhhhhhccCcceEEEEEEeccchhheeecCCcceEEeeccccccCcccccc
Confidence 334444444455666666655444 4489999999999999 78899999999999999988888888889
Q ss_pred CCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECC
Q 008820 291 HDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLL 370 (552)
Q Consensus 291 h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~ 370 (552)
|.++|+.+..+|.++ +|++++.||+..+.|++++........- ..........|+|||..|.+|+.||.|++||+.
T Consensus 302 h~~~V~~ls~h~tge-YllsAs~d~~w~Fsd~~~g~~lt~vs~~---~s~v~~ts~~fHpDgLifgtgt~d~~vkiwdlk 377 (506)
T KOG0289|consen 302 HEEPVTGLSLHPTGE-YLLSASNDGTWAFSDISSGSQLTVVSDE---TSDVEYTSAAFHPDGLIFGTGTPDGVVKIWDLK 377 (506)
T ss_pred ccccceeeeeccCCc-EEEEecCCceEEEEEccCCcEEEEEeec---cccceeEEeeEcCCceEEeccCCCceEEEEEcC
Confidence 999999999999776 7799999999999999977543332221 111223456899999999999999999999999
Q ss_pred CCceeEEecCCCCCeEEEEEe-CC-EEEEEeCCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEECCCcE
Q 008820 371 DGTLSCTMSGHKSAVSTLAVC-NG-VLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSI 448 (552)
Q Consensus 371 ~~~~~~~~~~h~~~v~~l~~~-~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i 448 (552)
++..+..|.+|.++|.+++|+ ++ ++++++.|+.|++||+|..+...++.......+.+ +.|.+.|.+|+.++.|=+|
T Consensus 378 s~~~~a~Fpght~~vk~i~FsENGY~Lat~add~~V~lwDLRKl~n~kt~~l~~~~~v~s-~~fD~SGt~L~~~g~~l~V 456 (506)
T KOG0289|consen 378 SQTNVAKFPGHTGPVKAISFSENGYWLATAADDGSVKLWDLRKLKNFKTIQLDEKKEVNS-LSFDQSGTYLGIAGSDLQV 456 (506)
T ss_pred CccccccCCCCCCceeEEEeccCceEEEEEecCCeEEEEEehhhcccceeecccccccee-EEEcCCCCeEEeecceeEE
Confidence 999999999999999999999 45 89999999999999999999888888776554555 6999999999999888777
Q ss_pred EEEeCC----cceeeeecccceEEEEEe--cCCEEEEEeCCCeEEEEec
Q 008820 449 KVWRND----KFMKSMQTHKGSVFAVFL--EGKWLFTGGWDKTVSVQEL 491 (552)
Q Consensus 449 ~iwd~~----~~~~~~~~h~~~v~~v~~--~~~~l~sgs~dg~i~iwd~ 491 (552)
++++.. +.+..+..|.+..+++.| ..++++++|.|..++++.+
T Consensus 457 y~~~k~~k~W~~~~~~~~~sg~st~v~Fg~~aq~l~s~smd~~l~~~a~ 505 (506)
T KOG0289|consen 457 YICKKKTKSWTEIKELADHSGLSTGVRFGEHAQYLASTSMDAILRLYAL 505 (506)
T ss_pred EEEecccccceeeehhhhcccccceeeecccceEEeeccchhheEEeec
Confidence 777722 356677778888899998 6789999999999888754
No 74
>KOG0308 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.94 E-value=5.1e-26 Score=218.90 Aligned_cols=306 Identities=21% Similarity=0.303 Sum_probs=223.6
Q ss_pred cCcceEEEeeCCCeEEEEEe---------------ecCccceEEEEEc--CCEEEEEeCCCcEEEEeCCCC--eEEEEEe
Q 008820 229 GGVKDLVNGLSKGNVKFKDL---------------QGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDF--SHVHTFK 289 (552)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~l---------------~~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~--~~~~~~~ 289 (552)
+.++.++++..|+.+++|.+ +.|.++|+.++.. ++.|+|+|.|-+|++|+...+ -+..++.
T Consensus 35 ~~~ryLfTgGRDg~i~~W~~~~d~~~~s~~~~asme~HsDWVNDiiL~~~~~tlIS~SsDtTVK~W~~~~~~~~c~stir 114 (735)
T KOG0308|consen 35 PNGRYLFTGGRDGIIRLWSVTQDSNEPSTPYIASMEHHSDWVNDIILCGNGKTLISASSDTTVKVWNAHKDNTFCMSTIR 114 (735)
T ss_pred CCCceEEecCCCceEEEeccccccCCcccchhhhhhhhHhHHhhHHhhcCCCceEEecCCceEEEeecccCcchhHhhhh
Confidence 44556889999999998874 4577888888776 889999999999999999877 5778889
Q ss_pred CCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCC--Cc---cccccccCCCceeeeEEEEee--CCCEEEEeeCCC
Q 008820 290 GHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLG--HE---PLKKWNEEKDWRYSGIHALTT--SGRYLYTGSGDR 362 (552)
Q Consensus 290 ~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~--~~---~~~~~~~~~~~~~~~~~~~~~--~~~~l~sgs~dg 362 (552)
.|.+.|.|+++...+..++++|+-|+.|.+||++++.. .. .+..-... ..+..++.++.. .+..|++|+..+
T Consensus 115 ~H~DYVkcla~~ak~~~lvaSgGLD~~IflWDin~~~~~l~~s~n~~t~~sl~-sG~k~siYSLA~N~t~t~ivsGgtek 193 (735)
T KOG0308|consen 115 THKDYVKCLAYIAKNNELVASGGLDRKIFLWDINTGTATLVASFNNVTVNSLG-SGPKDSIYSLAMNQTGTIIVSGGTEK 193 (735)
T ss_pred cccchheeeeecccCceeEEecCCCccEEEEEccCcchhhhhhccccccccCC-CCCccceeeeecCCcceEEEecCccc
Confidence 99999999999655677999999999999999997633 11 11110000 013334555544 455999999999
Q ss_pred cEEEEECCCCceeEEecCCCCCeEEEEEe-CC-EEEEEeCCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEE
Q 008820 363 TIKAWSLLDGTLSCTMSGHKSAVSTLAVC-NG-VLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLV 440 (552)
Q Consensus 363 ~i~iwd~~~~~~~~~~~~h~~~v~~l~~~-~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~ 440 (552)
.+++||.++++.+..+++|...|.++..+ ++ .++++|.||+|++||+...+++.++..|..+ +.+ +..+|+-..++
T Consensus 194 ~lr~wDprt~~kimkLrGHTdNVr~ll~~dDGt~~ls~sSDgtIrlWdLgqQrCl~T~~vH~e~-VWa-L~~~~sf~~vY 271 (735)
T KOG0308|consen 194 DLRLWDPRTCKKIMKLRGHTDNVRVLLVNDDGTRLLSASSDGTIRLWDLGQQRCLATYIVHKEG-VWA-LQSSPSFTHVY 271 (735)
T ss_pred ceEEeccccccceeeeeccccceEEEEEcCCCCeEeecCCCceEEeeeccccceeeeEEeccCc-eEE-EeeCCCcceEE
Confidence 99999999999999999999999999999 44 9999999999999999999999999988665 555 67788889999
Q ss_pred EEECCCcEEEEeCCccee--eeecccceEEEEEe--cCCEEEEEeCCCeEEEEecCCC-------eeeeeec--------
Q 008820 441 VSHESGSIKVWRNDKFMK--SMQTHKGSVFAVFL--EGKWLFTGGWDKTVSVQELAGD-------EFEEDVI-------- 501 (552)
Q Consensus 441 ~g~~dg~i~iwd~~~~~~--~~~~h~~~v~~v~~--~~~~l~sgs~dg~i~iwd~~~~-------~~~~~~~-------- 501 (552)
+|+.||.|+.=|++.... .+-....+|..+.. ..+-+.+++.|+.|+-|...-. .+.....
T Consensus 272 sG~rd~~i~~Tdl~n~~~~tlick~daPv~~l~~~~~~~~~WvtTtds~I~rW~~~~~~~l~~s~~~~~~~T~~~~~~~~ 351 (735)
T KOG0308|consen 272 SGGRDGNIYRTDLRNPAKSTLICKEDAPVLKLHLHEHDNSVWVTTTDSSIKRWKLEPDIALSVSGDLDFFSTDSNNHSCD 351 (735)
T ss_pred ecCCCCcEEecccCCchhheEeecCCCchhhhhhccccCCceeeeccccceecCCccccccccCCCCCcccccCCCcccc
Confidence 999999999998776311 11223345555544 2344477788899999965421 1110000
Q ss_pred ----cCCCcccCcceEEEEEe-CC-eEEEEeCCCeEEEEEec
Q 008820 502 ----PTGAIPCGSVITALLYW-QG-KLFVGCADRTVKIALCN 537 (552)
Q Consensus 502 ----~~~~~~~~~~v~~l~~~-~~-~l~s~s~Dg~v~iw~~~ 537 (552)
+...++....+..-+.- +. +++|-..+|.+.+||+-
T Consensus 352 ~~~tp~~vi~Gg~ai~k~~mL~dkRhVlTkDa~gnv~lwDIl 393 (735)
T KOG0308|consen 352 LTNTPDSVIPGGAAIKKHAMLNDKRHVLTKDAKGNVALWDIL 393 (735)
T ss_pred ccCCCceeccCchhhhhhhhhcCcceEeeecCCCCEEEEEee
Confidence 00001111122222222 22 39999999999999985
No 75
>KOG0275 consensus Conserved WD40 repeat-containing protein [General function prediction only]
Probab=99.94 E-value=2.3e-26 Score=203.59 Aligned_cols=263 Identities=15% Similarity=0.217 Sum_probs=221.3
Q ss_pred ccccceeeecCcceEEEeeCCCeEEEEEe-----------------ecCccceEEEEEc--CCEEEEEeCCCcEEEEeCC
Q 008820 220 ADIDQARAAGGVKDLVNGLSKGNVKFKDL-----------------QGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLK 280 (552)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-----------------~~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~ 280 (552)
..+.++.++++++.+++++.+|-+.+|++ .-|.++|.|+.|+ ..++++|+.||.|+||.+.
T Consensus 214 Sh~EcA~FSPDgqyLvsgSvDGFiEVWny~~GKlrKDLkYQAqd~fMMmd~aVlci~FSRDsEMlAsGsqDGkIKvWri~ 293 (508)
T KOG0275|consen 214 SHVECARFSPDGQYLVSGSVDGFIEVWNYTTGKLRKDLKYQAQDNFMMMDDAVLCISFSRDSEMLASGSQDGKIKVWRIE 293 (508)
T ss_pred cchhheeeCCCCceEeeccccceeeeehhccchhhhhhhhhhhcceeecccceEEEeecccHHHhhccCcCCcEEEEEEe
Confidence 34778999999999999999999999985 2478999999999 8899999999999999999
Q ss_pred CCeEEEEEe-CCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEee
Q 008820 281 DFSHVHTFK-GHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGS 359 (552)
Q Consensus 281 ~~~~~~~~~-~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs 359 (552)
+|.+++.|. .|+..|+++.|+.++. .+++++.|.++++--+.+++..+.+ .++..+ ..-..|.++|..+++++
T Consensus 294 tG~ClRrFdrAHtkGvt~l~FSrD~S-qiLS~sfD~tvRiHGlKSGK~LKEf---rGHsSy--vn~a~ft~dG~~iisaS 367 (508)
T KOG0275|consen 294 TGQCLRRFDRAHTKGVTCLSFSRDNS-QILSASFDQTVRIHGLKSGKCLKEF---RGHSSY--VNEATFTDDGHHIISAS 367 (508)
T ss_pred cchHHHHhhhhhccCeeEEEEccCcc-hhhcccccceEEEeccccchhHHHh---cCcccc--ccceEEcCCCCeEEEec
Confidence 999999996 8999999999998766 5689999999999999877654444 444432 22346889999999999
Q ss_pred CCCcEEEEECCCCceeEEecC--CCCCeEEEEEe---CCEEEEEeCCCcEEEEECCCCceeEEEecCC--CCceEEEEEE
Q 008820 360 GDRTIKAWSLLDGTLSCTMSG--HKSAVSTLAVC---NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDS--SGAVSSVLSL 432 (552)
Q Consensus 360 ~dg~i~iwd~~~~~~~~~~~~--h~~~v~~l~~~---~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~--~~~~~~~~~~ 432 (552)
.||+|++|+..+.+++.+++. ...+|+++-.- +..++.|...++|++.++. |+.++.+.... .+...+ ++.
T Consensus 368 sDgtvkvW~~KtteC~~Tfk~~~~d~~vnsv~~~PKnpeh~iVCNrsntv~imn~q-GQvVrsfsSGkREgGdFi~-~~l 445 (508)
T KOG0275|consen 368 SDGTVKVWHGKTTECLSTFKPLGTDYPVNSVILLPKNPEHFIVCNRSNTVYIMNMQ-GQVVRSFSSGKREGGDFIN-AIL 445 (508)
T ss_pred CCccEEEecCcchhhhhhccCCCCcccceeEEEcCCCCceEEEEcCCCeEEEEecc-ceEEeeeccCCccCCceEE-EEe
Confidence 999999999999999998864 44567777665 4489999999999999984 77777775432 233333 588
Q ss_pred cCCCCEEEEEECCCcEEEEe--CCcceeeeecccceEEEEE--ecCCEEEEEeCCCeEEEEe
Q 008820 433 TAVQHTLVVSHESGSIKVWR--NDKFMKSMQTHKGSVFAVF--LEGKWLFTGGWDKTVSVQE 490 (552)
Q Consensus 433 s~~~~~l~~g~~dg~i~iwd--~~~~~~~~~~h~~~v~~v~--~~~~~l~sgs~dg~i~iwd 490 (552)
+|.|.++++.++|+.++.|. .++....+..|...+..+. |..+.+++-++||.+++|.
T Consensus 446 SpkGewiYcigED~vlYCF~~~sG~LE~tl~VhEkdvIGl~HHPHqNllAsYsEDgllKLWk 507 (508)
T KOG0275|consen 446 SPKGEWIYCIGEDGVLYCFSVLSGKLERTLPVHEKDVIGLTHHPHQNLLASYSEDGLLKLWK 507 (508)
T ss_pred cCCCcEEEEEccCcEEEEEEeecCceeeeeecccccccccccCcccchhhhhcccchhhhcC
Confidence 99999999999999999998 5678888999999998886 4888999999999999995
No 76
>KOG0310 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.94 E-value=3.1e-25 Score=207.15 Aligned_cols=267 Identities=21% Similarity=0.334 Sum_probs=209.6
Q ss_pred ccceEEEEEc---C-CEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCC
Q 008820 252 RDCVTGLAVG---G-GFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLG 327 (552)
Q Consensus 252 ~~~V~~l~~s---~-~~l~s~s~dg~I~iwd~~~~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~ 327 (552)
.++|++++|+ . ++.+|+|. .+.||+..+....+++.-....|.++.|-.+|. ++++|+..|.|+++|..+
T Consensus 26 ~~~vssl~fsp~~P~d~aVt~S~--rvqly~~~~~~~~k~~srFk~~v~s~~fR~DG~-LlaaGD~sG~V~vfD~k~--- 99 (487)
T KOG0310|consen 26 HNSVSSLCFSPKHPYDFAVTSSV--RVQLYSSVTRSVRKTFSRFKDVVYSVDFRSDGR-LLAAGDESGHVKVFDMKS--- 99 (487)
T ss_pred cCcceeEecCCCCCCceEEeccc--EEEEEecchhhhhhhHHhhccceeEEEeecCCe-EEEccCCcCcEEEecccc---
Confidence 4689999999 3 45555543 699999998888888888889999999987554 889999999999999553
Q ss_pred CccccccccCCCceeeeEEEEeeCCC-EEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe---CCEEEEEeCCCc
Q 008820 328 HEPLKKWNEEKDWRYSGIHALTTSGR-YLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC---NGVLYSGSRDGT 403 (552)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~---~~~l~s~~~dg~ 403 (552)
...++.+..+.. ......|++.++ .+++|+.|+.+++||+.+......+.+|++.|.|.+++ +..+++||.||+
T Consensus 100 r~iLR~~~ah~a--pv~~~~f~~~d~t~l~s~sDd~v~k~~d~s~a~v~~~l~~htDYVR~g~~~~~~~hivvtGsYDg~ 177 (487)
T KOG0310|consen 100 RVILRQLYAHQA--PVHVTKFSPQDNTMLVSGSDDKVVKYWDLSTAYVQAELSGHTDYVRCGDISPANDHIVVTGSYDGK 177 (487)
T ss_pred HHHHHHHhhccC--ceeEEEecccCCeEEEecCCCceEEEEEcCCcEEEEEecCCcceeEeeccccCCCeEEEecCCCce
Confidence 234444444432 233456777655 88999999999999999998877899999999999999 338999999999
Q ss_pred EEEEECCCC-ceeEEEecCCCCceEEEEEEcCCCCEEEEEECCCcEEEEeCC---cceeeeecccceEEEEEe--cCCEE
Q 008820 404 IRLWSLSDH-SLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRND---KFMKSMQTHKGSVFAVFL--EGKWL 477 (552)
Q Consensus 404 i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~---~~~~~~~~h~~~v~~v~~--~~~~l 477 (552)
|++||++.. ..+..+. +..++..+ .+-|.|..+++++. ..|++||+- +.+.....|...|+|+.+ ++..|
T Consensus 178 vrl~DtR~~~~~v~eln--hg~pVe~v-l~lpsgs~iasAgG-n~vkVWDl~~G~qll~~~~~H~KtVTcL~l~s~~~rL 253 (487)
T KOG0310|consen 178 VRLWDTRSLTSRVVELN--HGCPVESV-LALPSGSLIASAGG-NSVKVWDLTTGGQLLTSMFNHNKTVTCLRLASDSTRL 253 (487)
T ss_pred EEEEEeccCCceeEEec--CCCceeeE-EEcCCCCEEEEcCC-CeEEEEEecCCceehhhhhcccceEEEEEeecCCceE
Confidence 999999987 4444444 34556664 66677888888765 479999954 344455569999999988 77999
Q ss_pred EEEeCCCeEEEEecCCCeeeeeeccCCCcccCcceEEEEEeC--CeEEEEeCCCeEEEEEe
Q 008820 478 FTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQ--GKLFVGCADRTVKIALC 536 (552)
Q Consensus 478 ~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~~--~~l~s~s~Dg~v~iw~~ 536 (552)
++||-|+.|++||+.+-+....... .++|.+++.+| ..++.|..||.+.+=+.
T Consensus 254 lS~sLD~~VKVfd~t~~Kvv~s~~~------~~pvLsiavs~dd~t~viGmsnGlv~~rr~ 308 (487)
T KOG0310|consen 254 LSGSLDRHVKVFDTTNYKVVHSWKY------PGPVLSIAVSPDDQTVVIGMSNGLVSIRRR 308 (487)
T ss_pred eecccccceEEEEccceEEEEeeec------ccceeeEEecCCCceEEEecccceeeeehh
Confidence 9999999999999877666555443 67799999996 44999999999887643
No 77
>KOG0643 consensus Translation initiation factor 3, subunit i (eIF-3i)/TGF-beta receptor-interacting protein (TRIP-1) [Translation, ribosomal structure and biogenesis; Signal transduction mechanisms]
Probab=99.94 E-value=1.1e-24 Score=188.29 Aligned_cols=267 Identities=16% Similarity=0.224 Sum_probs=204.9
Q ss_pred cccceeeecCcceEEEeeCCCeEE---------EEEeecCccceEEEEEc--CCEEEEEeCCCcEEEEeCCCCeEEEEEe
Q 008820 221 DIDQARAAGGVKDLVNGLSKGNVK---------FKDLQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFK 289 (552)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~---------~~~l~~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~~~~~~~~ 289 (552)
++.++.+..++..+.+...+.... +-++.||+++|+|+..+ .+.++||+.|.++++||+++|+++.+++
T Consensus 12 plTqiKyN~eGDLlFscaKD~~~~vw~s~nGerlGty~GHtGavW~~Did~~s~~liTGSAD~t~kLWDv~tGk~la~~k 91 (327)
T KOG0643|consen 12 PLTQIKYNREGDLLFSCAKDSTPTVWYSLNGERLGTYDGHTGAVWCCDIDWDSKHLITGSADQTAKLWDVETGKQLATWK 91 (327)
T ss_pred ccceEEecCCCcEEEEecCCCCceEEEecCCceeeeecCCCceEEEEEecCCcceeeeccccceeEEEEcCCCcEEEEee
Confidence 355566666666666666555444 44689999999999998 8999999999999999999999999998
Q ss_pred CCCCCeEEEEEecCCCCEEEEE----cCCCcEEEEeCCCCC----CCccccccccCCCceeeeEEEEeeCCCEEEEeeCC
Q 008820 290 GHDHKVMAVVYVDEDQPLCISG----DSGGGIFVWSFSFPL----GHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGD 361 (552)
Q Consensus 290 ~h~~~v~~v~~~~~~~~~l~s~----~~dg~i~vwd~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~d 361 (552)
...+|..+.|++.++..+++. +..+.|.++|++... ...++.....+. ......-+.+-++.|++|..|
T Consensus 92 -~~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI~t~~--skit~a~Wg~l~~~ii~Ghe~ 168 (327)
T KOG0643|consen 92 -TNSPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKIPTPD--SKITSALWGPLGETIIAGHED 168 (327)
T ss_pred -cCCeeEEEeeccCCcEEEEEehhhcCcceEEEEEEccCChhhhcccCceEEecCCc--cceeeeeecccCCEEEEecCC
Confidence 567899999999777555544 245789999998543 222233222222 222344677889999999999
Q ss_pred CcEEEEECCCCc-eeEEecCCCCCeEEEEEe-CC-EEEEEeCCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCE
Q 008820 362 RTIKAWSLLDGT-LSCTMSGHKSAVSTLAVC-NG-VLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHT 438 (552)
Q Consensus 362 g~i~iwd~~~~~-~~~~~~~h~~~v~~l~~~-~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ 438 (552)
|.|..||+++|+ .+...+.|...|+.+.++ +. +++++|.|.+-++||.++.+.++++.... ++.+ .+++|....
T Consensus 169 G~is~~da~~g~~~v~s~~~h~~~Ind~q~s~d~T~FiT~s~Dttakl~D~~tl~v~Kty~te~--PvN~-aaisP~~d~ 245 (327)
T KOG0643|consen 169 GSISIYDARTGKELVDSDEEHSSKINDLQFSRDRTYFITGSKDTTAKLVDVRTLEVLKTYTTER--PVNT-AAISPLLDH 245 (327)
T ss_pred CcEEEEEcccCceeeechhhhccccccccccCCcceEEecccCccceeeeccceeeEEEeeecc--cccc-eecccccce
Confidence 999999999984 555667899999999999 33 99999999999999999999999998653 3555 588888877
Q ss_pred EEEEECCCcEEEE--------------e--CCcceeeeecccceEEEEEe--cCCEEEEEeCCCeEEEEecCC
Q 008820 439 LVVSHESGSIKVW--------------R--NDKFMKSMQTHKGSVFAVFL--EGKWLFTGGWDKTVSVQELAG 493 (552)
Q Consensus 439 l~~g~~dg~i~iw--------------d--~~~~~~~~~~h~~~v~~v~~--~~~~l~sgs~dg~i~iwd~~~ 493 (552)
++.|+.....-+= + ..+.+..+++|-++|+++++ +|+..++|++||.|++.-+..
T Consensus 246 VilgGGqeA~dVTTT~~r~GKFEArFyh~i~eEEigrvkGHFGPINsvAfhPdGksYsSGGEDG~VR~h~Fd~ 318 (327)
T KOG0643|consen 246 VILGGGQEAMDVTTTSTRAGKFEARFYHLIFEEEIGRVKGHFGPINSVAFHPDGKSYSSGGEDGYVRLHHFDS 318 (327)
T ss_pred EEecCCceeeeeeeecccccchhhhHHHHHHHHHhccccccccCcceeEECCCCcccccCCCCceEEEEEecc
Confidence 7777654333222 1 11345677899999999886 999999999999999976554
No 78
>PTZ00421 coronin; Provisional
Probab=99.94 E-value=2.6e-24 Score=216.86 Aligned_cols=203 Identities=19% Similarity=0.236 Sum_probs=159.5
Q ss_pred EeecCccceEEEEEc---CCEEEEEeCCCcEEEEeCCCC-------eEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCc
Q 008820 247 DLQGHRDCVTGLAVG---GGFLFSSSFDKSIHVWSLKDF-------SHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGG 316 (552)
Q Consensus 247 ~l~~H~~~V~~l~~s---~~~l~s~s~dg~I~iwd~~~~-------~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~ 316 (552)
.+.||.+.|++++|+ +++|++|+.|++|++||+.++ +++..+.+|...|.+++|+|++..+|++++.|++
T Consensus 70 ~l~GH~~~V~~v~fsP~d~~~LaSgS~DgtIkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~Dgt 149 (493)
T PTZ00421 70 ILLGQEGPIIDVAFNPFDPQKLFTASEDGTIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADMV 149 (493)
T ss_pred eEeCCCCCEEEEEEcCCCCCEEEEEeCCCEEEEEecCCCccccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCCE
Confidence 378999999999998 579999999999999999765 3567889999999999999988789999999999
Q ss_pred EEEEeCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCe-EEEEEe--CC
Q 008820 317 IFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAV-STLAVC--NG 393 (552)
Q Consensus 317 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v-~~l~~~--~~ 393 (552)
|++||++++.... .+..+.. .....++++++++|++|+.|+.|++||+++++.+..+.+|.+.+ ..+.|. ++
T Consensus 150 VrIWDl~tg~~~~---~l~~h~~--~V~sla~spdG~lLatgs~Dg~IrIwD~rsg~~v~tl~~H~~~~~~~~~w~~~~~ 224 (493)
T PTZ00421 150 VNVWDVERGKAVE---VIKCHSD--QITSLEWNLDGSLLCTTSKDKKLNIIDPRDGTIVSSVEAHASAKSQRCLWAKRKD 224 (493)
T ss_pred EEEEECCCCeEEE---EEcCCCC--ceEEEEEECCCCEEEEecCCCEEEEEECCCCcEEEEEecCCCCcceEEEEcCCCC
Confidence 9999998764332 2222222 12335778899999999999999999999999999999898654 455666 34
Q ss_pred EEEEEe----CCCcEEEEECCCCc-eeEEEecCCCCceEEEEEEcCCCCEEEEEE-CCCcEEEEeCCc
Q 008820 394 VLYSGS----RDGTIRLWSLSDHS-LLTVLEEDSSGAVSSVLSLTAVQHTLVVSH-ESGSIKVWRNDK 455 (552)
Q Consensus 394 ~l~s~~----~dg~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~-~dg~i~iwd~~~ 455 (552)
.+++++ .|+.|++||+++.. ++.....+... ......++++++++++++ .|+.|++||+.+
T Consensus 225 ~ivt~G~s~s~Dr~VklWDlr~~~~p~~~~~~d~~~-~~~~~~~d~d~~~L~lggkgDg~Iriwdl~~ 291 (493)
T PTZ00421 225 LIITLGCSKSQQRQIMLWDTRKMASPYSTVDLDQSS-ALFIPFFDEDTNLLYIGSKGEGNIRCFELMN 291 (493)
T ss_pred eEEEEecCCCCCCeEEEEeCCCCCCceeEeccCCCC-ceEEEEEcCCCCEEEEEEeCCCeEEEEEeeC
Confidence 666554 47999999998765 34333333222 333457899999999887 599999999754
No 79
>KOG1446 consensus Histone H3 (Lys4) methyltransferase complex and RNA cleavage factor II complex, subunit SWD2 [RNA processing and modification; Chromatin structure and dynamics; Posttranslational modification, protein turnover, chaperones]
Probab=99.94 E-value=8.1e-24 Score=187.90 Aligned_cols=279 Identities=14% Similarity=0.164 Sum_probs=217.9
Q ss_pred eecCccceEEEEEc--CCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCCEEEEEcC--CCcEEEEeCC
Q 008820 248 LQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDS--GGGIFVWSFS 323 (552)
Q Consensus 248 l~~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~--dg~i~vwd~~ 323 (552)
|..-.+.|+++.|+ |.++++++.|.++++||..+++.++++..+.-.+..++|......+ +.++. |.+|+..++.
T Consensus 10 f~~~~~~i~sl~fs~~G~~litss~dDsl~LYd~~~g~~~~ti~skkyG~~~~~Fth~~~~~-i~sStk~d~tIryLsl~ 88 (311)
T KOG1446|consen 10 FRETNGKINSLDFSDDGLLLITSSEDDSLRLYDSLSGKQVKTINSKKYGVDLACFTHHSNTV-IHSSTKEDDTIRYLSLH 88 (311)
T ss_pred cccCCCceeEEEecCCCCEEEEecCCCeEEEEEcCCCceeeEeecccccccEEEEecCCceE-EEccCCCCCceEEEEee
Confidence 44566789999999 9999999999999999999999999999888899999998766544 44444 8999999998
Q ss_pred CCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe-CC-EEEEEeCC
Q 008820 324 FPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC-NG-VLYSGSRD 401 (552)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~-~~-~l~s~~~d 401 (552)
+. +.++-+.+|... + .-.+++|-++.+++++.|++|++||++..++...+.....+ ..+|+ .+ ++|++...
T Consensus 89 dN---kylRYF~GH~~~-V-~sL~~sP~~d~FlS~S~D~tvrLWDlR~~~cqg~l~~~~~p--i~AfDp~GLifA~~~~~ 161 (311)
T KOG1446|consen 89 DN---KYLRYFPGHKKR-V-NSLSVSPKDDTFLSSSLDKTVRLWDLRVKKCQGLLNLSGRP--IAAFDPEGLIFALANGS 161 (311)
T ss_pred cC---ceEEEcCCCCce-E-EEEEecCCCCeEEecccCCeEEeeEecCCCCceEEecCCCc--ceeECCCCcEEEEecCC
Confidence 65 445555555542 2 23477888899999999999999999988888777644444 45677 44 66666666
Q ss_pred CcEEEEECCCC--ceeEEEecC-CCCceEEEEEEcCCCCEEEEEECCCcEEEEe--CCcceeeeecccceE----E-EEE
Q 008820 402 GTIRLWSLSDH--SLLTVLEED-SSGAVSSVLSLTAVQHTLVVSHESGSIKVWR--NDKFMKSMQTHKGSV----F-AVF 471 (552)
Q Consensus 402 g~i~iwd~~~~--~~~~~~~~~-~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd--~~~~~~~~~~h~~~v----~-~v~ 471 (552)
..|++||+|.. .+..++... ........+.|+|||+.++.++..+.+++.| .+.....+.++...- . +..
T Consensus 162 ~~IkLyD~Rs~dkgPF~tf~i~~~~~~ew~~l~FS~dGK~iLlsT~~s~~~~lDAf~G~~~~tfs~~~~~~~~~~~a~ft 241 (311)
T KOG1446|consen 162 ELIKLYDLRSFDKGPFTTFSITDNDEAEWTDLEFSPDGKSILLSTNASFIYLLDAFDGTVKSTFSGYPNAGNLPLSATFT 241 (311)
T ss_pred CeEEEEEecccCCCCceeEccCCCCccceeeeEEcCCCCEEEEEeCCCcEEEEEccCCcEeeeEeeccCCCCcceeEEEC
Confidence 69999999874 345555443 2233445589999999999999999999999 456677777665432 2 344
Q ss_pred ecCCEEEEEeCCCeEEEEecCCCeeeeeeccCCCcccCcceEEEEEeCCeEEEEeCCCeEEEEEecC
Q 008820 472 LEGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQGKLFVGCADRTVKIALCNR 538 (552)
Q Consensus 472 ~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~l~s~s~Dg~v~iw~~~~ 538 (552)
||++++++|+.||+|.+|+++++......... +..++.++.|+|.....++.+..+.+|-.+.
T Consensus 242 Pds~Fvl~gs~dg~i~vw~~~tg~~v~~~~~~----~~~~~~~~~fnP~~~mf~sa~s~l~fw~p~~ 304 (311)
T KOG1446|consen 242 PDSKFVLSGSDDGTIHVWNLETGKKVAVLRGP----NGGPVSCVRFNPRYAMFVSASSNLVFWLPDE 304 (311)
T ss_pred CCCcEEEEecCCCcEEEEEcCCCcEeeEecCC----CCCCccccccCCceeeeeecCceEEEEeccc
Confidence 69999999999999999999988776665543 3667888999999988888888999998763
No 80
>KOG0299 consensus U3 snoRNP-associated protein (contains WD40 repeats) [RNA processing and modification]
Probab=99.94 E-value=3.9e-25 Score=204.86 Aligned_cols=252 Identities=19% Similarity=0.269 Sum_probs=199.8
Q ss_pred EEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCccc-cc----------cccC--CCceeeeEEEEeeC
Q 008820 285 VHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPL-KK----------WNEE--KDWRYSGIHALTTS 351 (552)
Q Consensus 285 ~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~-~~----------~~~~--~~~~~~~~~~~~~~ 351 (552)
...+..|.-++.+++++|++. +.++++.||+|.-|++.++.....+ .. .... ......-..++++|
T Consensus 135 ~~~~~~H~~s~~~vals~d~~-~~fsask~g~i~kw~v~tgk~~~~i~~~~ev~k~~~~~~k~~r~~h~keil~~avS~D 213 (479)
T KOG0299|consen 135 FRVIGKHQLSVTSVALSPDDK-RVFSASKDGTILKWDVLTGKKDRYIIERDEVLKSHGNPLKESRKGHVKEILTLAVSSD 213 (479)
T ss_pred ceeeccccCcceEEEeecccc-ceeecCCCcceeeeehhcCcccccccccchhhhhccCCCCcccccccceeEEEEEcCC
Confidence 455677999999999999766 6699999999999999887643111 11 0011 11112234578999
Q ss_pred CCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe--CCEEEEEeCCCcEEEEECCCCceeEEEecCCCCceEEE
Q 008820 352 GRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC--NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSV 429 (552)
Q Consensus 352 ~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 429 (552)
+++|++|+.|..|.|||.++.+.++.+.+|.+.|.+++|. .+.+++++.|.+|++|++.....+.++.+|+. .+..
T Consensus 214 gkylatgg~d~~v~Iw~~~t~ehv~~~~ghr~~V~~L~fr~gt~~lys~s~Drsvkvw~~~~~s~vetlyGHqd-~v~~- 291 (479)
T KOG0299|consen 214 GKYLATGGRDRHVQIWDCDTLEHVKVFKGHRGAVSSLAFRKGTSELYSASADRSVKVWSIDQLSYVETLYGHQD-GVLG- 291 (479)
T ss_pred CcEEEecCCCceEEEecCcccchhhcccccccceeeeeeecCccceeeeecCCceEEEehhHhHHHHHHhCCcc-ceee-
Confidence 9999999999999999999999999999999999999999 44999999999999999998888888877754 3444
Q ss_pred EEEcCCCCEEEEEECCCcEEEEeCCc-ceeeeecccceEEEEEe-cCCEEEEEeCCCeEEEEecCCCeeeeeeccCCCcc
Q 008820 430 LSLTAVQHTLVVSHESGSIKVWRNDK-FMKSMQTHKGSVFAVFL-EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIP 507 (552)
Q Consensus 430 ~~~s~~~~~l~~g~~dg~i~iwd~~~-~~~~~~~h~~~v~~v~~-~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~ 507 (552)
+....-++.+-+|+.|+++++|++.. ....+.+|.+.+-|+++ +...+++||.||.|.+|++...+........+.+.
T Consensus 292 IdaL~reR~vtVGgrDrT~rlwKi~eesqlifrg~~~sidcv~~In~~HfvsGSdnG~IaLWs~~KKkplf~~~~AHgv~ 371 (479)
T KOG0299|consen 292 IDALSRERCVTVGGRDRTVRLWKIPEESQLIFRGGEGSIDCVAFINDEHFVSGSDNGSIALWSLLKKKPLFTSRLAHGVI 371 (479)
T ss_pred echhcccceEEeccccceeEEEeccccceeeeeCCCCCeeeEEEecccceeeccCCceEEEeeecccCceeEeecccccc
Confidence 34455577788888999999999754 45567889999999998 99999999999999999998776655443333222
Q ss_pred c-------CcceEEEEEeC--CeEEEEeCCCeEEEEEecCC
Q 008820 508 C-------GSVITALLYWQ--GKLFVGCADRTVKIALCNRQ 539 (552)
Q Consensus 508 ~-------~~~v~~l~~~~--~~l~s~s~Dg~v~iw~~~~~ 539 (552)
. ...|++++..+ +.+++|+.+|.|++|.++..
T Consensus 372 ~~~~~~~~~~Witsla~i~~sdL~asGS~~G~vrLW~i~~g 412 (479)
T KOG0299|consen 372 PELDPVNGNFWITSLAVIPGSDLLASGSWSGCVRLWKIEDG 412 (479)
T ss_pred CCccccccccceeeeEecccCceEEecCCCCceEEEEecCC
Confidence 1 23788998886 56999999999999999866
No 81
>KOG0283 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.94 E-value=4.1e-25 Score=219.79 Aligned_cols=280 Identities=16% Similarity=0.268 Sum_probs=191.2
Q ss_pred EEee-cCccceEEEEEc--CCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCC----------CeEEEEEec---CCC-CEE
Q 008820 246 KDLQ-GHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDH----------KVMAVVYVD---EDQ-PLC 308 (552)
Q Consensus 246 ~~l~-~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~~~~~~~~~h~~----------~v~~v~~~~---~~~-~~l 308 (552)
..+. +|.++|+++.|+ |+|||+|+.|+.|+||.+...+....-.+..+ .+..+.-++ .+. ...
T Consensus 260 Qe~~~ah~gaIw~mKFS~DGKyLAsaGeD~virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~~~~s~~ 339 (712)
T KOG0283|consen 260 QEISNAHKGAIWAMKFSHDGKYLASAGEDGVIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKISSRTSSS 339 (712)
T ss_pred eccccccCCcEEEEEeCCCCceeeecCCCceEEEEEEeccchhcccccccchhhhhhhhccccCcccccccccccccccc
Confidence 3455 899999999999 99999999999999999865332111000000 000000000 000 000
Q ss_pred EEEcCCCcEEEEeCCCCCCCccccccccCCCceeeeEEEEeeCCC-EEEEeeCCCcEEEEECCCCceeEEecCCCCCeEE
Q 008820 309 ISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGR-YLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVST 387 (552)
Q Consensus 309 ~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~ 387 (552)
-.+.....+.+-+-...-...++..+.+ |...++.+++..+ +|++++.|.+|++|++...+++..|. |.+-|+|
T Consensus 340 ~~~~~s~~~~~p~~~f~f~ekP~~ef~G----Ht~DILDlSWSKn~fLLSSSMDKTVRLWh~~~~~CL~~F~-HndfVTc 414 (712)
T KOG0283|consen 340 RKGSQSPCVLLPLKAFVFSEKPFCEFKG----HTADILDLSWSKNNFLLSSSMDKTVRLWHPGRKECLKVFS-HNDFVTC 414 (712)
T ss_pred ccccCCccccCCCccccccccchhhhhc----cchhheecccccCCeeEeccccccEEeecCCCcceeeEEe-cCCeeEE
Confidence 1111112211111111112344444444 4446778888755 99999999999999999999999998 9999999
Q ss_pred EEEe---CCEEEEEeCCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEECCCcEEEEeCCcceeee----
Q 008820 388 LAVC---NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDKFMKSM---- 460 (552)
Q Consensus 388 l~~~---~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~~~~~~~---- 460 (552)
++|+ ++++++|+-||.||||++...+.+.-...+ ..++. +++.|||+..++|+.+|.+++|++..+....
T Consensus 415 VaFnPvDDryFiSGSLD~KvRiWsI~d~~Vv~W~Dl~--~lITA-vcy~PdGk~avIGt~~G~C~fY~t~~lk~~~~~~I 491 (712)
T KOG0283|consen 415 VAFNPVDDRYFISGSLDGKVRLWSISDKKVVDWNDLR--DLITA-VCYSPDGKGAVIGTFNGYCRFYDTEGLKLVSDFHI 491 (712)
T ss_pred EEecccCCCcEeecccccceEEeecCcCeeEeehhhh--hhhee-EEeccCCceEEEEEeccEEEEEEccCCeEEEeeeE
Confidence 9999 559999999999999999887766554443 44444 7999999999999999999999976432211
Q ss_pred -------ecccceEEEEEe---cCCEEEEEeCCCeEEEEecCCCeeeeeeccCCCcccCcceEEEEEe-C-CeEEEEeCC
Q 008820 461 -------QTHKGSVFAVFL---EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYW-Q-GKLFVGCAD 528 (552)
Q Consensus 461 -------~~h~~~v~~v~~---~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~-~-~~l~s~s~D 528 (552)
..|. .|+.+.+ +...+++.+.|..|||+|.++..+...+...... ...+.+ .|+ + ..|++|+.|
T Consensus 492 ~~~~~Kk~~~~-rITG~Q~~p~~~~~vLVTSnDSrIRI~d~~~~~lv~KfKG~~n~--~SQ~~A-sfs~Dgk~IVs~seD 567 (712)
T KOG0283|consen 492 RLHNKKKKQGK-RITGLQFFPGDPDEVLVTSNDSRIRIYDGRDKDLVHKFKGFRNT--SSQISA-SFSSDGKHIVSASED 567 (712)
T ss_pred eeccCccccCc-eeeeeEecCCCCCeEEEecCCCceEEEeccchhhhhhhcccccC--Ccceee-eEccCCCEEEEeecC
Confidence 1133 7999886 4556888889999999999877776665544321 233333 333 4 459999999
Q ss_pred CeEEEEEec
Q 008820 529 RTVKIALCN 537 (552)
Q Consensus 529 g~v~iw~~~ 537 (552)
..|+||+++
T Consensus 568 s~VYiW~~~ 576 (712)
T KOG0283|consen 568 SWVYIWKND 576 (712)
T ss_pred ceEEEEeCC
Confidence 999999985
No 82
>KOG0283 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.94 E-value=4e-25 Score=219.91 Aligned_cols=229 Identities=20% Similarity=0.303 Sum_probs=195.2
Q ss_pred CCCccccceeeecCcceEEEeeCCCeEEEEE-------------------------------------------------
Q 008820 217 SDGADIDQARAAGGVKDLVNGLSKGNVKFKD------------------------------------------------- 247 (552)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------------------------------- 247 (552)
.+...|.+..|+.+++.++++..|+-+++|.
T Consensus 265 ah~gaIw~mKFS~DGKyLAsaGeD~virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~~~~s~~~~~~~ 344 (712)
T KOG0283|consen 265 AHKGAIWAMKFSHDGKYLASAGEDGVIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKISSRTSSSRKGSQ 344 (712)
T ss_pred ccCCcEEEEEeCCCCceeeecCCCceEEEEEEeccchhcccccccchhhhhhhhccccCccccccccccccccccccccC
Confidence 4455699999999999999999999999885
Q ss_pred --------------------eecCccceEEEEEc-CCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCC
Q 008820 248 --------------------LQGHRDCVTGLAVG-GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQP 306 (552)
Q Consensus 248 --------------------l~~H~~~V~~l~~s-~~~l~s~s~dg~I~iwd~~~~~~~~~~~~h~~~v~~v~~~~~~~~ 306 (552)
|.||.+.|..+.|+ .++|+|+|.|.|||+|++....+++.|. |.+.|+||+|+|.+.+
T Consensus 345 s~~~~~p~~~f~f~ekP~~ef~GHt~DILDlSWSKn~fLLSSSMDKTVRLWh~~~~~CL~~F~-HndfVTcVaFnPvDDr 423 (712)
T KOG0283|consen 345 SPCVLLPLKAFVFSEKPFCEFKGHTADILDLSWSKNNFLLSSSMDKTVRLWHPGRKECLKVFS-HNDFVTCVAFNPVDDR 423 (712)
T ss_pred CccccCCCccccccccchhhhhccchhheecccccCCeeEeccccccEEeecCCCcceeeEEe-cCCeeEEEEecccCCC
Confidence 24799999999999 9999999999999999999999999987 9999999999999999
Q ss_pred EEEEEcCCCcEEEEeCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCceeEEec-------
Q 008820 307 LCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMS------- 379 (552)
Q Consensus 307 ~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~------- 379 (552)
++++|+-||.|+||++... .+..|..-+ ......++.|+|+..++|+.+|.+++|+....+....+.
T Consensus 424 yFiSGSLD~KvRiWsI~d~----~Vv~W~Dl~--~lITAvcy~PdGk~avIGt~~G~C~fY~t~~lk~~~~~~I~~~~~K 497 (712)
T KOG0283|consen 424 YFISGSLDGKVRLWSISDK----KVVDWNDLR--DLITAVCYSPDGKGAVIGTFNGYCRFYDTEGLKLVSDFHIRLHNKK 497 (712)
T ss_pred cEeecccccceEEeecCcC----eeEeehhhh--hhheeEEeccCCceEEEEEeccEEEEEEccCCeEEEeeeEeeccCc
Confidence 9999999999999998743 233333322 223456899999999999999999999998777665442
Q ss_pred --CCCCCeEEEEEe---CCEEEEEeCCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEECCCcEEEEeC
Q 008820 380 --GHKSAVSTLAVC---NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRN 453 (552)
Q Consensus 380 --~h~~~v~~l~~~---~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~ 453 (552)
.|. .|+.+.|. .+.+++.+.|..|||+|.++..++..+++.+.........|+.||++|+++++|..|++|+.
T Consensus 498 k~~~~-rITG~Q~~p~~~~~vLVTSnDSrIRI~d~~~~~lv~KfKG~~n~~SQ~~Asfs~Dgk~IVs~seDs~VYiW~~ 575 (712)
T KOG0283|consen 498 KKQGK-RITGLQFFPGDPDEVLVTSNDSRIRIYDGRDKDLVHKFKGFRNTSSQISASFSSDGKHIVSASEDSWVYIWKN 575 (712)
T ss_pred cccCc-eeeeeEecCCCCCeEEEecCCCceEEEeccchhhhhhhcccccCCcceeeeEccCCCEEEEeecCceEEEEeC
Confidence 133 79999998 33789999999999999999999999987765555444689999999999999999999985
No 83
>KOG0641 consensus WD40 repeat protein [General function prediction only]
Probab=99.94 E-value=3.4e-23 Score=174.73 Aligned_cols=285 Identities=18% Similarity=0.248 Sum_probs=211.5
Q ss_pred ecCccceEEEEEc--CCEEEEEeCCCcEEEEeCCC------C---------eEEEEEeCCCCCeEEEEEecCCCCEEEEE
Q 008820 249 QGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKD------F---------SHVHTFKGHDHKVMAVVYVDEDQPLCISG 311 (552)
Q Consensus 249 ~~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~------~---------~~~~~~~~h~~~v~~v~~~~~~~~~l~s~ 311 (552)
-....+|.+++|+ |.+.+.|+...+.||..... + -..+.-+.|.+.|+|.+|+|.++ ++++|
T Consensus 29 l~dsqairav~fhp~g~lyavgsnskt~ric~yp~l~~~r~~hea~~~pp~v~~kr~khhkgsiyc~~ws~~ge-liatg 107 (350)
T KOG0641|consen 29 LEDSQAIRAVAFHPAGGLYAVGSNSKTFRICAYPALIDLRHAHEAAKQPPSVLCKRNKHHKGSIYCTAWSPCGE-LIATG 107 (350)
T ss_pred ecchhheeeEEecCCCceEEeccCCceEEEEccccccCcccccccccCCCeEEeeeccccCccEEEEEecCccC-eEEec
Confidence 3456789999999 99999999999999875431 1 01223357999999999999776 88999
Q ss_pred cCCCcEEEEeCCCCCCC--ccccccccCCCceeeeEEEEeeC----CCEEEEee-CCCcEEEEECCCCceeEEecCCCCC
Q 008820 312 DSGGGIFVWSFSFPLGH--EPLKKWNEEKDWRYSGIHALTTS----GRYLYTGS-GDRTIKAWSLLDGTLSCTMSGHKSA 384 (552)
Q Consensus 312 ~~dg~i~vwd~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~----~~~l~sgs-~dg~i~iwd~~~~~~~~~~~~h~~~ 384 (552)
+.|.+|++..++..... ..-..++.+.. .... .+|--+ +..|++++ .|..|++-|..+|+..+.+.+|.+.
T Consensus 108 sndk~ik~l~fn~dt~~~~g~dle~nmhdg-tird-l~fld~~~s~~~il~s~gagdc~iy~tdc~~g~~~~a~sghtgh 185 (350)
T KOG0641|consen 108 SNDKTIKVLPFNADTCNATGHDLEFNMHDG-TIRD-LAFLDDPESGGAILASAGAGDCKIYITDCGRGQGFHALSGHTGH 185 (350)
T ss_pred CCCceEEEEecccccccccCcceeeeecCC-ceee-eEEecCCCcCceEEEecCCCcceEEEeecCCCCcceeecCCccc
Confidence 99999999877643322 11122222222 1111 123222 33666654 5778888899999999999999999
Q ss_pred eEEEE-EeCCEEEEEeCCCcEEEEECCCCceeEEEecCC--C---CceEEEEEEcCCCCEEEEEECCCcEEEEeCC--cc
Q 008820 385 VSTLA-VCNGVLYSGSRDGTIRLWSLSDHSLLTVLEEDS--S---GAVSSVLSLTAVQHTLVVSHESGSIKVWRND--KF 456 (552)
Q Consensus 385 v~~l~-~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~--~---~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~--~~ 456 (552)
|.++- |++-++++|+.|.+|++||++-..++.++.... . ......++..|.|++|++|..|....+||++ .+
T Consensus 186 ilalyswn~~m~~sgsqdktirfwdlrv~~~v~~l~~~~~~~glessavaav~vdpsgrll~sg~~dssc~lydirg~r~ 265 (350)
T KOG0641|consen 186 ILALYSWNGAMFASGSQDKTIRFWDLRVNSCVNTLDNDFHDGGLESSAVAAVAVDPSGRLLASGHADSSCMLYDIRGGRM 265 (350)
T ss_pred EEEEEEecCcEEEccCCCceEEEEeeeccceeeeccCcccCCCcccceeEEEEECCCcceeeeccCCCceEEEEeeCCce
Confidence 98874 445699999999999999999988888775321 1 1233346899999999999999999999975 58
Q ss_pred eeeeecccceEEEEEe--cCCEEEEEeCCCeEEEEecCCCeeeeeeccCCCcccCcceEEEEEeCCe--EEEEeCCCeEE
Q 008820 457 MKSMQTHKGSVFAVFL--EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQGK--LFVGCADRTVK 532 (552)
Q Consensus 457 ~~~~~~h~~~v~~v~~--~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~--l~s~s~Dg~v~ 532 (552)
++.+..|+..|.++.| ...++++++.|..|++=|+.+.-.. .+.......+...+..+.|++.. +++.+.|.++.
T Consensus 266 iq~f~phsadir~vrfsp~a~yllt~syd~~ikltdlqgdla~-el~~~vv~ehkdk~i~~rwh~~d~sfisssadkt~t 344 (350)
T KOG0641|consen 266 IQRFHPHSADIRCVRFSPGAHYLLTCSYDMKIKLTDLQGDLAH-ELPIMVVAEHKDKAIQCRWHPQDFSFISSSADKTAT 344 (350)
T ss_pred eeeeCCCccceeEEEeCCCceEEEEecccceEEEeecccchhh-cCceEEEEeccCceEEEEecCccceeeeccCcceEE
Confidence 8999999999999987 6779999999999999999864211 11111111235667778899643 89999999999
Q ss_pred EEEec
Q 008820 533 IALCN 537 (552)
Q Consensus 533 iw~~~ 537 (552)
+|-++
T Consensus 345 lwa~~ 349 (350)
T KOG0641|consen 345 LWALN 349 (350)
T ss_pred EeccC
Confidence 99876
No 84
>KOG0305 consensus Anaphase promoting complex, Cdc20, Cdh1, and Ama1 subunits [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones]
Probab=99.94 E-value=2.9e-24 Score=208.54 Aligned_cols=233 Identities=21% Similarity=0.379 Sum_probs=199.4
Q ss_pred ccceEEEEEc--CCEEEEEeCCCcEEEEeCCCCeEEEEEeC-CCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCC
Q 008820 252 RDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKG-HDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGH 328 (552)
Q Consensus 252 ~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~~~~~~~~~-h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~ 328 (552)
.+.|+++.|+ |++|+.|..+|.|.|||..+.+.+.++.+ |...|.+++|. ...+.+|+.|+.|..+|++..+..
T Consensus 217 ~~~vtSv~ws~~G~~LavG~~~g~v~iwD~~~~k~~~~~~~~h~~rvg~laW~---~~~lssGsr~~~I~~~dvR~~~~~ 293 (484)
T KOG0305|consen 217 EELVTSVKWSPDGSHLAVGTSDGTVQIWDVKEQKKTRTLRGSHASRVGSLAWN---SSVLSSGSRDGKILNHDVRISQHV 293 (484)
T ss_pred CCceEEEEECCCCCEEEEeecCCeEEEEehhhccccccccCCcCceeEEEecc---CceEEEecCCCcEEEEEEecchhh
Confidence 8999999999 99999999999999999999999999999 99999999996 558899999999999999976544
Q ss_pred ccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe---CCEEEEEe--CCCc
Q 008820 329 EPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC---NGVLYSGS--RDGT 403 (552)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~---~~~l~s~~--~dg~ 403 (552)
.. ....|. ...+-..++++++++++|+.|+.+.|||....+++..+..|...|.+++|+ .++||+|+ .|++
T Consensus 294 ~~--~~~~H~--qeVCgLkws~d~~~lASGgnDN~~~Iwd~~~~~p~~~~~~H~aAVKA~awcP~q~~lLAsGGGs~D~~ 369 (484)
T KOG0305|consen 294 VS--TLQGHR--QEVCGLKWSPDGNQLASGGNDNVVFIWDGLSPEPKFTFTEHTAAVKALAWCPWQSGLLATGGGSADRC 369 (484)
T ss_pred hh--hhhccc--ceeeeeEECCCCCeeccCCCccceEeccCCCccccEEEeccceeeeEeeeCCCccCceEEcCCCcccE
Confidence 33 222222 223345788899999999999999999998889999999999999999999 67999875 6999
Q ss_pred EEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEE--ECCCcEEEEeCC--cceeeeecccceEEEEEe--cCCEE
Q 008820 404 IRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVS--HESGSIKVWRND--KFMKSMQTHKGSVFAVFL--EGKWL 477 (552)
Q Consensus 404 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g--~~dg~i~iwd~~--~~~~~~~~h~~~v~~v~~--~~~~l 477 (552)
|++||..++..+..+... ...+.+.|++..+.|+++ ..++.|.||+.. +.+..+.+|...|..+++ ||..+
T Consensus 370 i~fwn~~~g~~i~~vdtg---sQVcsL~Wsk~~kEi~sthG~s~n~i~lw~~ps~~~~~~l~gH~~RVl~la~SPdg~~i 446 (484)
T KOG0305|consen 370 IKFWNTNTGARIDSVDTG---SQVCSLIWSKKYKELLSTHGYSENQITLWKYPSMKLVAELLGHTSRVLYLALSPDGETI 446 (484)
T ss_pred EEEEEcCCCcEecccccC---CceeeEEEcCCCCEEEEecCCCCCcEEEEeccccceeeeecCCcceeEEEEECCCCCEE
Confidence 999999999998888643 334447999998777764 457789999964 467788999999988765 99999
Q ss_pred EEEeCCCeEEEEecCCC
Q 008820 478 FTGGWDKTVSVQELAGD 494 (552)
Q Consensus 478 ~sgs~dg~i~iwd~~~~ 494 (552)
++|+.|.++++|++-+.
T Consensus 447 ~t~a~DETlrfw~~f~~ 463 (484)
T KOG0305|consen 447 VTGAADETLRFWNLFDE 463 (484)
T ss_pred EEecccCcEEeccccCC
Confidence 99999999999999764
No 85
>KOG0308 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.93 E-value=2.3e-25 Score=214.42 Aligned_cols=279 Identities=20% Similarity=0.346 Sum_probs=217.0
Q ss_pred cCccceE---EEEEc---CCEEEEEeCCCcEEEEeCCCC------eEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcE
Q 008820 250 GHRDCVT---GLAVG---GGFLFSSSFDKSIHVWSLKDF------SHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGI 317 (552)
Q Consensus 250 ~H~~~V~---~l~~s---~~~l~s~s~dg~I~iwd~~~~------~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i 317 (552)
.|...|. ++..+ +++|+||+.||.|++|+.... ..+.+++.|.+.|++++...+++ .|+++|.|-+|
T Consensus 19 qn~~~v~~~~~Lq~da~~~ryLfTgGRDg~i~~W~~~~d~~~~s~~~~asme~HsDWVNDiiL~~~~~-tlIS~SsDtTV 97 (735)
T KOG0308|consen 19 QNRNGVNITKALQLDAPNGRYLFTGGRDGIIRLWSVTQDSNEPSTPYIASMEHHSDWVNDIILCGNGK-TLISASSDTTV 97 (735)
T ss_pred hccccccchhhccccCCCCceEEecCCCceEEEeccccccCCcccchhhhhhhhHhHHhhHHhhcCCC-ceEEecCCceE
Confidence 4555555 44444 788999999999999998532 24677889999999998876555 67999999999
Q ss_pred EEEeCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCc--eeE--------Eec-CCCCCeE
Q 008820 318 FVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGT--LSC--------TMS-GHKSAVS 386 (552)
Q Consensus 318 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~--~~~--------~~~-~h~~~v~ 386 (552)
++|+..... ..+...+..|.+. ..++.-...+...+++|+-|+.|.+||++++. .+. .+. ++...|+
T Consensus 98 K~W~~~~~~-~~c~stir~H~DY-Vkcla~~ak~~~lvaSgGLD~~IflWDin~~~~~l~~s~n~~t~~sl~sG~k~siY 175 (735)
T KOG0308|consen 98 KVWNAHKDN-TFCMSTIRTHKDY-VKCLAYIAKNNELVASGGLDRKIFLWDINTGTATLVASFNNVTVNSLGSGPKDSIY 175 (735)
T ss_pred EEeecccCc-chhHhhhhcccch-heeeeecccCceeEEecCCCccEEEEEccCcchhhhhhccccccccCCCCCcccee
Confidence 999998664 4455555555543 22222225567799999999999999999772 222 223 7888999
Q ss_pred EEEEeCC--EEEEEeCCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEECCCcEEEEeCC--cceeeeec
Q 008820 387 TLAVCNG--VLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRND--KFMKSMQT 462 (552)
Q Consensus 387 ~l~~~~~--~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~--~~~~~~~~ 462 (552)
+++.++. .+++|+..+.+++||.++.+.+..+.+|. ..+.. +-.+.||..++++++||+|++||++ .++.++..
T Consensus 176 SLA~N~t~t~ivsGgtek~lr~wDprt~~kimkLrGHT-dNVr~-ll~~dDGt~~ls~sSDgtIrlWdLgqQrCl~T~~v 253 (735)
T KOG0308|consen 176 SLAMNQTGTIIVSGGTEKDLRLWDPRTCKKIMKLRGHT-DNVRV-LLVNDDGTRLLSASSDGTIRLWDLGQQRCLATYIV 253 (735)
T ss_pred eeecCCcceEEEecCcccceEEeccccccceeeeeccc-cceEE-EEEcCCCCeEeecCCCceEEeeeccccceeeeEEe
Confidence 9999844 88999999999999999999999999774 44444 6889999999999999999999987 47889999
Q ss_pred ccceEEEEEe--cCCEEEEEeCCCeEEEEecCCCeeeeeeccCCCcccCcceEEEEEe--CCeEEEEeCCCeEEEEEecC
Q 008820 463 HKGSVFAVFL--EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYW--QGKLFVGCADRTVKIALCNR 538 (552)
Q Consensus 463 h~~~v~~v~~--~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~s~Dg~v~iw~~~~ 538 (552)
|...|+++.. +-.++++|+.||.|+.=|+++......+... ..+|..+..+ ++.+.+++.|+.|+-|....
T Consensus 254 H~e~VWaL~~~~sf~~vYsG~rd~~i~~Tdl~n~~~~tlick~-----daPv~~l~~~~~~~~~WvtTtds~I~rW~~~~ 328 (735)
T KOG0308|consen 254 HKEGVWALQSSPSFTHVYSGGRDGNIYRTDLRNPAKSTLICKE-----DAPVLKLHLHEHDNSVWVTTTDSSIKRWKLEP 328 (735)
T ss_pred ccCceEEEeeCCCcceEEecCCCCcEEecccCCchhheEeecC-----CCchhhhhhccccCCceeeeccccceecCCcc
Confidence 9999998875 6779999999999999999874322222111 4456666666 45678999999999998764
No 86
>KOG1539 consensus WD repeat protein [General function prediction only]
Probab=99.93 E-value=1.9e-23 Score=206.62 Aligned_cols=297 Identities=21% Similarity=0.323 Sum_probs=238.9
Q ss_pred ceEEEeeCCCeEEE---------EEeecCccceEEEEEc--CCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEE
Q 008820 232 KDLVNGLSKGNVKF---------KDLQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVY 300 (552)
Q Consensus 232 ~~~~~~~~~~~~~~---------~~l~~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~~~~~~~~~h~~~v~~v~~ 300 (552)
+.++.+...|..++ ++++++...|+++.-+ -+.++.|..+|+|.+++++.++.+.+++...+.|++++|
T Consensus 173 NKIvvGs~~G~lql~Nvrt~K~v~~f~~~~s~IT~ieqsPaLDVVaiG~~~G~ViifNlK~dkil~sFk~d~g~VtslSF 252 (910)
T KOG1539|consen 173 NKIVVGSSQGRLQLWNVRTGKVVYTFQEFFSRITAIEQSPALDVVAIGLENGTVIIFNLKFDKILMSFKQDWGRVTSLSF 252 (910)
T ss_pred eeEEEeecCCcEEEEEeccCcEEEEecccccceeEeccCCcceEEEEeccCceEEEEEcccCcEEEEEEccccceeEEEe
Confidence 44455555555554 5578899999999988 789999999999999999999999999966799999999
Q ss_pred ecCCCCEEEEEcCCCcEEEEeCCCCCCCcccc--------------------------------------------c---
Q 008820 301 VDEDQPLCISGDSGGGIFVWSFSFPLGHEPLK--------------------------------------------K--- 333 (552)
Q Consensus 301 ~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~--------------------------------------------~--- 333 (552)
..||..++++|+..|.+.+||++..+....++ .
T Consensus 253 rtDG~p~las~~~~G~m~~wDLe~kkl~~v~~nah~~sv~~~~fl~~epVl~ta~~DnSlk~~vfD~~dg~pR~LR~R~G 332 (910)
T KOG1539|consen 253 RTDGNPLLASGRSNGDMAFWDLEKKKLINVTRNAHYGSVTGATFLPGEPVLVTAGADNSLKVWVFDSGDGVPRLLRSRGG 332 (910)
T ss_pred ccCCCeeEEeccCCceEEEEEcCCCeeeeeeeccccCCcccceecCCCceEeeccCCCceeEEEeeCCCCcchheeeccC
Confidence 99999999999999999999997411000000 0
Q ss_pred --------------------------------------------------------------------------------
Q 008820 334 -------------------------------------------------------------------------------- 333 (552)
Q Consensus 334 -------------------------------------------------------------------------------- 333 (552)
T Consensus 333 Hs~Pp~~irfy~~~g~~ilsa~~Drt~r~fs~~~e~~~~~l~~~~~~~~~kk~~~~~~~~~k~p~i~~fa~~~~RE~~W~ 412 (910)
T KOG1539|consen 333 HSAPPSCIRFYGSQGHFILSAKQDRTLRSFSVISESQSQELGQLHNKKRAKKVNVFSTEKLKLPPIVEFAFENAREKEWD 412 (910)
T ss_pred CCCCchheeeeccCcEEEEecccCcchhhhhhhHHHHhHhhcccccccccccccccchhhhcCCcceeeecccchhhhhc
Confidence
Q ss_pred --------------cccC-----------C----CceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCceeEEe---cCC
Q 008820 334 --------------WNEE-----------K----DWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTM---SGH 381 (552)
Q Consensus 334 --------------~~~~-----------~----~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~---~~h 381 (552)
|.-. . ........++++.|++.+.|+..|.|-+|++++|-....+ ..|
T Consensus 413 Nv~~~h~~~~~~~tW~~~n~~~G~~~L~~~~~~~~~~~~~av~vs~CGNF~~IG~S~G~Id~fNmQSGi~r~sf~~~~ah 492 (910)
T KOG1539|consen 413 NVITAHKGKRSAYTWNFRNKTSGRHVLDPKRFKKDDINATAVCVSFCGNFVFIGYSKGTIDRFNMQSGIHRKSFGDSPAH 492 (910)
T ss_pred ceeEEecCcceEEEEeccCcccccEEecCccccccCcceEEEEEeccCceEEEeccCCeEEEEEcccCeeecccccCccc
Confidence 0000 0 0000112266778899999999999999999999988888 589
Q ss_pred CCCeEEEEEe--CCEEEEEeCCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEECCCcEEEEeC--Ccce
Q 008820 382 KSAVSTLAVC--NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRN--DKFM 457 (552)
Q Consensus 382 ~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~--~~~~ 457 (552)
.++|+.++.+ +..+++++.+|.+++||..+...+..+..... +.. +..+.....++.+..|-.|+++|. ++.+
T Consensus 493 ~~~V~gla~D~~n~~~vsa~~~Gilkfw~f~~k~l~~~l~l~~~--~~~-iv~hr~s~l~a~~~ddf~I~vvD~~t~kvv 569 (910)
T KOG1539|consen 493 KGEVTGLAVDGTNRLLVSAGADGILKFWDFKKKVLKKSLRLGSS--ITG-IVYHRVSDLLAIALDDFSIRVVDVVTRKVV 569 (910)
T ss_pred cCceeEEEecCCCceEEEccCcceEEEEecCCcceeeeeccCCC--cce-eeeeehhhhhhhhcCceeEEEEEchhhhhh
Confidence 9999999998 56899999999999999999888888876532 222 456667778999999999999994 5688
Q ss_pred eeeecccceEEEEEe--cCCEEEEEeCCCeEEEEecCCCeeeeeeccCCCcccCcceEEEEEeC--CeEEEEeCC-CeEE
Q 008820 458 KSMQTHKGSVFAVFL--EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQ--GKLFVGCAD-RTVK 532 (552)
Q Consensus 458 ~~~~~h~~~v~~v~~--~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~~--~~l~s~s~D-g~v~ 532 (552)
+.+.+|.+.|++++| ||++|++++.|++|++||+.++.+.-.+.. ..++.++.|+| +.|+|+..| .-|+
T Consensus 570 R~f~gh~nritd~~FS~DgrWlisasmD~tIr~wDlpt~~lID~~~v------d~~~~sls~SPngD~LAT~Hvd~~gIy 643 (910)
T KOG1539|consen 570 REFWGHGNRITDMTFSPDGRWLISASMDSTIRTWDLPTGTLIDGLLV------DSPCTSLSFSPNGDFLATVHVDQNGIY 643 (910)
T ss_pred HHhhccccceeeeEeCCCCcEEEEeecCCcEEEEeccCcceeeeEec------CCcceeeEECCCCCEEEEEEecCceEE
Confidence 999999999999887 999999999999999999999887765554 67789999997 459999988 7799
Q ss_pred EEEec
Q 008820 533 IALCN 537 (552)
Q Consensus 533 iw~~~ 537 (552)
+|.-.
T Consensus 644 lWsNk 648 (910)
T KOG1539|consen 644 LWSNK 648 (910)
T ss_pred EEEch
Confidence 99754
No 87
>PTZ00420 coronin; Provisional
Probab=99.93 E-value=1.3e-23 Score=212.63 Aligned_cols=223 Identities=13% Similarity=0.181 Sum_probs=167.2
Q ss_pred EEEEeecCccceEEEEEc---CCEEEEEeCCCcEEEEeCCCCe--------EEEEEeCCCCCeEEEEEecCCCCEEEEEc
Q 008820 244 KFKDLQGHRDCVTGLAVG---GGFLFSSSFDKSIHVWSLKDFS--------HVHTFKGHDHKVMAVVYVDEDQPLCISGD 312 (552)
Q Consensus 244 ~~~~l~~H~~~V~~l~~s---~~~l~s~s~dg~I~iwd~~~~~--------~~~~~~~h~~~v~~v~~~~~~~~~l~s~~ 312 (552)
.+..+.+|.++|.+++|+ +.+|+||+.|++|+|||+.++. ++..+.+|...|.+++|+|++..++++++
T Consensus 66 ~v~~L~gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH~~~V~sVaf~P~g~~iLaSgS 145 (568)
T PTZ00420 66 PVIKLKGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGHKKKISIIDWNPMNYYIMCSSG 145 (568)
T ss_pred eEEEEcCCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCccccccccceEEeecCCCcEEEEEECCCCCeEEEEEe
Confidence 456789999999999998 5799999999999999997642 34567899999999999998888889999
Q ss_pred CCCcEEEEeCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEE---
Q 008820 313 SGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLA--- 389 (552)
Q Consensus 313 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~--- 389 (552)
.|++|++||++++.....+. .. ......+|+++|++|++++.|+.|++||+++++.+.++.+|.+.+.+..
T Consensus 146 ~DgtIrIWDl~tg~~~~~i~---~~---~~V~SlswspdG~lLat~s~D~~IrIwD~Rsg~~i~tl~gH~g~~~s~~v~~ 219 (568)
T PTZ00420 146 FDSFVNIWDIENEKRAFQIN---MP---KKLSSLKWNIKGNLLSGTCVGKHMHIIDPRKQEIASSFHIHDGGKNTKNIWI 219 (568)
T ss_pred CCCeEEEEECCCCcEEEEEe---cC---CcEEEEEECCCCCEEEEEecCCEEEEEECCCCcEEEEEecccCCceeEEEEe
Confidence 99999999998765332221 11 1123457888999999999999999999999999999999988764433
Q ss_pred --Ee--CCEEEEEeCCC----cEEEEECCC-CceeEEEecCCCCceEEEEEEcCCCCEEEEEECCCcEEEEeCCcc-eee
Q 008820 390 --VC--NGVLYSGSRDG----TIRLWSLSD-HSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDKF-MKS 459 (552)
Q Consensus 390 --~~--~~~l~s~~~dg----~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~~~-~~~ 459 (552)
|+ ++++++++.|+ +|++||+++ ++++..+..+...........++++.++++|+.|+.|++|+.... ...
T Consensus 220 ~~fs~d~~~IlTtG~d~~~~R~VkLWDlr~~~~pl~~~~ld~~~~~L~p~~D~~tg~l~lsGkGD~tIr~~e~~~~~~~~ 299 (568)
T PTZ00420 220 DGLGGDDNYILSTGFSKNNMREMKLWDLKNTTSALVTMSIDNASAPLIPHYDESTGLIYLIGKGDGNCRYYQHSLGSIRK 299 (568)
T ss_pred eeEcCCCCEEEEEEcCCCCccEEEEEECCCCCCceEEEEecCCccceEEeeeCCCCCEEEEEECCCeEEEEEccCCcEEe
Confidence 22 34888888774 799999995 566666554432222222234566889999999999999996532 222
Q ss_pred eec--ccceEEEEEe
Q 008820 460 MQT--HKGSVFAVFL 472 (552)
Q Consensus 460 ~~~--h~~~v~~v~~ 472 (552)
+.. +..+..++.+
T Consensus 300 l~~~~s~~p~~g~~f 314 (568)
T PTZ00420 300 VNEYKSCSPFRSFGF 314 (568)
T ss_pred ecccccCCCccceEE
Confidence 221 3455555655
No 88
>KOG1036 consensus Mitotic spindle checkpoint protein BUB3, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning]
Probab=99.93 E-value=8.3e-24 Score=186.85 Aligned_cols=261 Identities=18% Similarity=0.223 Sum_probs=194.9
Q ss_pred ccceEEEEEc--CCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCc
Q 008820 252 RDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHE 329 (552)
Q Consensus 252 ~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~ 329 (552)
++.|+++.|+ ++.|+.+++||++++||+........++ |..++.+++|.+ ...+++|+.||.|+.+|+.++....
T Consensus 13 ~d~IS~v~f~~~~~~LLvssWDgslrlYdv~~~~l~~~~~-~~~plL~c~F~d--~~~~~~G~~dg~vr~~Dln~~~~~~ 89 (323)
T KOG1036|consen 13 EDGISSVKFSPSSSDLLVSSWDGSLRLYDVPANSLKLKFK-HGAPLLDCAFAD--ESTIVTGGLDGQVRRYDLNTGNEDQ 89 (323)
T ss_pred hhceeeEEEcCcCCcEEEEeccCcEEEEeccchhhhhhee-cCCceeeeeccC--CceEEEeccCceEEEEEecCCccee
Confidence 5789999999 7888888899999999998876555555 899999999986 3467999999999999999764332
Q ss_pred cccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEeCCEEEEEeCCCcEEEEEC
Q 008820 330 PLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVCNGVLYSGSRDGTIRLWSL 409 (552)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~~~dg~i~iwd~ 409 (552)
.-. |.. . ..+....+..+.+++|+.|++|++||.++......+.. ...|.|+...++.|+.|+.|..+.+||+
T Consensus 90 igt----h~~-~-i~ci~~~~~~~~vIsgsWD~~ik~wD~R~~~~~~~~d~-~kkVy~~~v~g~~LvVg~~~r~v~iyDL 162 (323)
T KOG1036|consen 90 IGT----HDE-G-IRCIEYSYEVGCVISGSWDKTIKFWDPRNKVVVGTFDQ-GKKVYCMDVSGNRLVVGTSDRKVLIYDL 162 (323)
T ss_pred ecc----CCC-c-eEEEEeeccCCeEEEcccCccEEEEecccccccccccc-CceEEEEeccCCEEEEeecCceEEEEEc
Confidence 211 111 1 12223445567899999999999999998666666653 4489999999999999999999999999
Q ss_pred CCCceeEEEecCCCCceEEEEEEcCCCCEEEEEECCCcEEEE--eCC----cceeeeecccc---------eEEEEEe--
Q 008820 410 SDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVW--RND----KFMKSMQTHKG---------SVFAVFL-- 472 (552)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iw--d~~----~~~~~~~~h~~---------~v~~v~~-- 472 (552)
++.....+.....-...+.++++-|++.-.++++-||.|.+= |.. +....++.|.. +|.+++|
T Consensus 163 Rn~~~~~q~reS~lkyqtR~v~~~pn~eGy~~sSieGRVavE~~d~s~~~~skkyaFkCHr~~~~~~~~~yPVNai~Fhp 242 (323)
T KOG1036|consen 163 RNLDEPFQRRESSLKYQTRCVALVPNGEGYVVSSIEGRVAVEYFDDSEEAQSKKYAFKCHRLSEKDTEIIYPVNAIAFHP 242 (323)
T ss_pred ccccchhhhccccceeEEEEEEEecCCCceEEEeecceEEEEccCCchHHhhhceeEEeeecccCCceEEEEeceeEecc
Confidence 987654433332223333445667788889999999999874 433 23445666653 6788887
Q ss_pred cCCEEEEEeCCCeEEEEecCCCeeeeeeccCCCcccCcceEEEEEeC-C-eEEEEeC
Q 008820 473 EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQ-G-KLFVGCA 527 (552)
Q Consensus 473 ~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~~-~-~l~s~s~ 527 (552)
--+.|+||+.||.|.+||+.+.+....+... ...|.+++|+. + .||+|+.
T Consensus 243 ~~~tfaTgGsDG~V~~Wd~~~rKrl~q~~~~-----~~SI~slsfs~dG~~LAia~s 294 (323)
T KOG1036|consen 243 IHGTFATGGSDGIVNIWDLFNRKRLKQLAKY-----ETSISSLSFSMDGSLLAIASS 294 (323)
T ss_pred ccceEEecCCCceEEEccCcchhhhhhccCC-----CCceEEEEeccCCCeEEEEec
Confidence 5668999999999999999887665554432 45689999993 3 4777663
No 89
>KOG0772 consensus Uncharacterized conserved protein, contains WD40 repeat [Function unknown]
Probab=99.93 E-value=1.8e-24 Score=202.78 Aligned_cols=270 Identities=16% Similarity=0.209 Sum_probs=206.3
Q ss_pred ccccceeeecCcceEEEeeCCCeEEEEEeec--------------CccceEEEEEc--CCEEEEEeCCCcEEEEeCCCCe
Q 008820 220 ADIDQARAAGGVKDLVNGLSKGNVKFKDLQG--------------HRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFS 283 (552)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--------------H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~~ 283 (552)
..+.+.++.+.+.++++++.+..+++|+|.| ....|++++|+ ++.|+..+.....+|+|-....
T Consensus 168 k~Vsal~~Dp~GaR~~sGs~Dy~v~~wDf~gMdas~~~fr~l~P~E~h~i~sl~ys~Tg~~iLvvsg~aqakl~DRdG~~ 247 (641)
T KOG0772|consen 168 KIVSALAVDPSGARFVSGSLDYTVKFWDFQGMDASMRSFRQLQPCETHQINSLQYSVTGDQILVVSGSAQAKLLDRDGFE 247 (641)
T ss_pred eEEEEeeecCCCceeeeccccceEEEEecccccccchhhhccCcccccccceeeecCCCCeEEEEecCcceeEEccCCce
Confidence 4577888889999999999999999999876 23479999999 8888888888899999965444
Q ss_pred EEEE------------EeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCccc-cccccCCCceeeeEEEEee
Q 008820 284 HVHT------------FKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPL-KKWNEEKDWRYSGIHALTT 350 (552)
Q Consensus 284 ~~~~------------~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 350 (552)
.... -+||...+++.+|+|.....+++++.||++++||++..+....+ +.............++|++
T Consensus 248 ~~e~~KGDQYI~Dm~nTKGHia~lt~g~whP~~k~~FlT~s~DgtlRiWdv~~~k~q~qVik~k~~~g~Rv~~tsC~~nr 327 (641)
T KOG0772|consen 248 IVEFSKGDQYIRDMYNTKGHIAELTCGCWHPDNKEEFLTCSYDGTLRIWDVNNTKSQLQVIKTKPAGGKRVPVTSCAWNR 327 (641)
T ss_pred eeeeeccchhhhhhhccCCceeeeeccccccCcccceEEecCCCcEEEEecCCchhheeEEeeccCCCcccCceeeecCC
Confidence 3322 35799999999999999999999999999999999876543332 2222222224445678999
Q ss_pred CCCEEEEeeCCCcEEEEECCCCc--ee-EEecCCCC--CeEEEEEe--CCEEEEEeCCCcEEEEECCCCc-eeEEEecCC
Q 008820 351 SGRYLYTGSGDRTIKAWSLLDGT--LS-CTMSGHKS--AVSTLAVC--NGVLYSGSRDGTIRLWSLSDHS-LLTVLEEDS 422 (552)
Q Consensus 351 ~~~~l~sgs~dg~i~iwd~~~~~--~~-~~~~~h~~--~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~-~~~~~~~~~ 422 (552)
+++.|++|..||+|.+|+..+.. +. ..-.+|.. .|+||.|+ +++|++-+.|+++++||+++.+ ++.....-.
T Consensus 328 dg~~iAagc~DGSIQ~W~~~~~~v~p~~~vk~AH~~g~~Itsi~FS~dg~~LlSRg~D~tLKvWDLrq~kkpL~~~tgL~ 407 (641)
T KOG0772|consen 328 DGKLIAAGCLDGSIQIWDKGSRTVRPVMKVKDAHLPGQDITSISFSYDGNYLLSRGFDDTLKVWDLRQFKKPLNVRTGLP 407 (641)
T ss_pred CcchhhhcccCCceeeeecCCcccccceEeeeccCCCCceeEEEeccccchhhhccCCCceeeeeccccccchhhhcCCC
Confidence 99999999999999999975332 22 23356777 89999999 5599999999999999999865 444443322
Q ss_pred CCceEEEEEEcCCCCEEEEEEC------CCcEEEEeCCc--ceeeeecccceEEEEEe--cCCEEEEEeCCCeEEEE
Q 008820 423 SGAVSSVLSLTAVQHTLVVSHE------SGSIKVWRNDK--FMKSMQTHKGSVFAVFL--EGKWLFTGGWDKTVSVQ 489 (552)
Q Consensus 423 ~~~~~~~~~~s~~~~~l~~g~~------dg~i~iwd~~~--~~~~~~~h~~~v~~v~~--~~~~l~sgs~dg~i~iw 489 (552)
......-++|||+.++|++|.. .|++++||..+ .+..+......|..+.| .-+.|+.|+.||++++|
T Consensus 408 t~~~~tdc~FSPd~kli~TGtS~~~~~~~g~L~f~d~~t~d~v~ki~i~~aSvv~~~WhpkLNQi~~gsgdG~~~vy 484 (641)
T KOG0772|consen 408 TPFPGTDCCFSPDDKLILTGTSAPNGMTAGTLFFFDRMTLDTVYKIDISTASVVRCLWHPKLNQIFAGSGDGTAHVY 484 (641)
T ss_pred ccCCCCccccCCCceEEEecccccCCCCCceEEEEeccceeeEEEecCCCceEEEEeecchhhheeeecCCCceEEE
Confidence 2222223699999999999864 57899999665 34555556778888888 44568888889999986
No 90
>KOG0973 consensus Histone transcription regulator HIRA, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.93 E-value=5.5e-24 Score=217.13 Aligned_cols=281 Identities=19% Similarity=0.204 Sum_probs=216.4
Q ss_pred CccceEEEEEc--CCEEEEEe--CCCcEEEEeCCC------------CeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCC
Q 008820 251 HRDCVTGLAVG--GGFLFSSS--FDKSIHVWSLKD------------FSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSG 314 (552)
Q Consensus 251 H~~~V~~l~~s--~~~l~s~s--~dg~I~iwd~~~------------~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~d 314 (552)
+...|.++..+ +..++||+ .|+.++||+.+. .+.+.++..|.+.|+|+.|+|++. +||+|+.|
T Consensus 12 ~~~~IfSIdv~pdg~~~aTgGq~~d~~~~iW~~~~vl~~~~~~~~~l~k~l~~m~~h~~sv~CVR~S~dG~-~lAsGSDD 90 (942)
T KOG0973|consen 12 NEKSIFSIDVHPDGVKFATGGQVLDGGIVIWSQDPVLDEKEEKNENLPKHLCTMDDHDGSVNCVRFSPDGS-YLASGSDD 90 (942)
T ss_pred CCeeEEEEEecCCceeEecCCccccccceeeccccccchhhhhhcccchhheeeccccCceeEEEECCCCC-eEeeccCc
Confidence 35568899998 99999999 999999998642 345667788999999999999776 77999999
Q ss_pred CcEEEEeCCCCCCC---------------ccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCceeEEec
Q 008820 315 GGIFVWSFSFPLGH---------------EPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMS 379 (552)
Q Consensus 315 g~i~vwd~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~ 379 (552)
+.|.+|+....... +.+..+.+|... . .-.+++|++.++++++.|++|.+||..+.+.+..++
T Consensus 91 ~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~D-V-~Dv~Wsp~~~~lvS~s~DnsViiwn~~tF~~~~vl~ 168 (942)
T KOG0973|consen 91 RLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSD-V-LDVNWSPDDSLLVSVSLDNSVIIWNAKTFELLKVLR 168 (942)
T ss_pred ceEEEeeecccCCcccccccccccccceeeEEEEEecCCCc-c-ceeccCCCccEEEEecccceEEEEccccceeeeeee
Confidence 99999998731000 011222222221 1 123677889999999999999999999999999999
Q ss_pred CCCCCeEEEEEe--CCEEEEEeCCCcEEEEECCCCceeEEEecCCC----CceEEEEEEcCCCCEEEEEEC----CCcEE
Q 008820 380 GHKSAVSTLAVC--NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSS----GAVSSVLSLTAVQHTLVVSHE----SGSIK 449 (552)
Q Consensus 380 ~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~----~~~~~~~~~s~~~~~l~~g~~----dg~i~ 449 (552)
+|.+.|..+.|+ +.+|++-+.|++|++|++.+....+.+..+.. ......+.|+|||.+|++... -.++.
T Consensus 169 ~H~s~VKGvs~DP~Gky~ASqsdDrtikvwrt~dw~i~k~It~pf~~~~~~T~f~RlSWSPDG~~las~nA~n~~~~~~~ 248 (942)
T KOG0973|consen 169 GHQSLVKGVSWDPIGKYFASQSDDRTLKVWRTSDWGIEKSITKPFEESPLTTFFLRLSWSPDGHHLASPNAVNGGKSTIA 248 (942)
T ss_pred cccccccceEECCccCeeeeecCCceEEEEEcccceeeEeeccchhhCCCcceeeecccCCCcCeecchhhccCCcceeE
Confidence 999999999999 67999999999999999887777766654322 223334789999999998643 34677
Q ss_pred EEeCC--cceeeeecccceEEEEEec-------CC------------EEEEEeCCCeEEEEecCCCeeeeeeccCCCccc
Q 008820 450 VWRND--KFMKSMQTHKGSVFAVFLE-------GK------------WLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPC 508 (552)
Q Consensus 450 iwd~~--~~~~~~~~h~~~v~~v~~~-------~~------------~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~ 508 (552)
|.+-+ +.-..+-+|.+++.++.|+ .+ .+|+||.|++|-||.....+........ .
T Consensus 249 IieR~tWk~~~~LvGH~~p~evvrFnP~lfe~~~~ng~~~~~~~~y~i~AvgSqDrSlSVW~T~~~RPl~vi~~l----f 324 (942)
T KOG0973|consen 249 IIERGTWKVDKDLVGHSAPVEVVRFNPKLFERNNKNGTSTQPNCYYCIAAVGSQDRSLSVWNTALPRPLFVIHNL----F 324 (942)
T ss_pred EEecCCceeeeeeecCCCceEEEEeChHHhccccccCCccCCCcceEEEEEecCCccEEEEecCCCCchhhhhhh----h
Confidence 77643 4567889999999999861 12 6789999999999998655443332222 1
Q ss_pred CcceEEEEEeC-Ce-EEEEeCCCeEEEEEecC
Q 008820 509 GSVITALLYWQ-GK-LFVGCADRTVKIALCNR 538 (552)
Q Consensus 509 ~~~v~~l~~~~-~~-l~s~s~Dg~v~iw~~~~ 538 (552)
...|.+++|++ |. |+.+|.||+|.+..+++
T Consensus 325 ~~SI~DmsWspdG~~LfacS~DGtV~~i~Fee 356 (942)
T KOG0973|consen 325 NKSIVDMSWSPDGFSLFACSLDGTVALIHFEE 356 (942)
T ss_pred cCceeeeeEcCCCCeEEEEecCCeEEEEEcch
Confidence 66799999995 44 99999999999999874
No 91
>KOG0772 consensus Uncharacterized conserved protein, contains WD40 repeat [Function unknown]
Probab=99.93 E-value=6.1e-24 Score=199.30 Aligned_cols=283 Identities=16% Similarity=0.253 Sum_probs=201.2
Q ss_pred EEeecCccceEEEEEc--CCEEEEEeCCCcEEEEeCCCC----eEEEEEe-CCCCCeEEEEEecCCCCEEEEEcCCCcEE
Q 008820 246 KDLQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDF----SHVHTFK-GHDHKVMAVVYVDEDQPLCISGDSGGGIF 318 (552)
Q Consensus 246 ~~l~~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~----~~~~~~~-~h~~~v~~v~~~~~~~~~l~s~~~dg~i~ 318 (552)
..|.+|+..|+++++. |..|+|||.|.+|++||+... +..+.+. .....|.++.|++.++.+ ++.+.....+
T Consensus 161 i~l~hgtk~Vsal~~Dp~GaR~~sGs~Dy~v~~wDf~gMdas~~~fr~l~P~E~h~i~sl~ys~Tg~~i-Lvvsg~aqak 239 (641)
T KOG0772|consen 161 IQLKHGTKIVSALAVDPSGARFVSGSLDYTVKFWDFQGMDASMRSFRQLQPCETHQINSLQYSVTGDQI-LVVSGSAQAK 239 (641)
T ss_pred EeccCCceEEEEeeecCCCceeeeccccceEEEEecccccccchhhhccCcccccccceeeecCCCCeE-EEEecCccee
Confidence 3488999999999998 999999999999999998743 2223332 344579999999987755 4455567788
Q ss_pred EEeCCCCCCCcc------ccccccCCCceeeeEE--EEeeCCC-EEEEeeCCCcEEEEECCCCce-eEEe-----cCCCC
Q 008820 319 VWSFSFPLGHEP------LKKWNEEKDWRYSGIH--ALTTSGR-YLYTGSGDRTIKAWSLLDGTL-SCTM-----SGHKS 383 (552)
Q Consensus 319 vwd~~~~~~~~~------~~~~~~~~~~~~~~~~--~~~~~~~-~l~sgs~dg~i~iwd~~~~~~-~~~~-----~~h~~ 383 (552)
++|-+....... +......+ .|...+. +|+|..+ .+++++.||++++||+++.+. ...+ .+..-
T Consensus 240 l~DRdG~~~~e~~KGDQYI~Dm~nTK-GHia~lt~g~whP~~k~~FlT~s~DgtlRiWdv~~~k~q~qVik~k~~~g~Rv 318 (641)
T KOG0772|consen 240 LLDRDGFEIVEFSKGDQYIRDMYNTK-GHIAELTCGCWHPDNKEEFLTCSYDGTLRIWDVNNTKSQLQVIKTKPAGGKRV 318 (641)
T ss_pred EEccCCceeeeeeccchhhhhhhccC-CceeeeeccccccCcccceEEecCCCcEEEEecCCchhheeEEeeccCCCccc
Confidence 888663322221 11222111 2444444 5666544 899999999999999986543 2222 23345
Q ss_pred CeEEEEEe-C-CEEEEEeCCCcEEEEECCCCc--ee-EEEecCCCCceEEEEEEcCCCCEEEEEECCCcEEEEeCCccee
Q 008820 384 AVSTLAVC-N-GVLYSGSRDGTIRLWSLSDHS--LL-TVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDKFMK 458 (552)
Q Consensus 384 ~v~~l~~~-~-~~l~s~~~dg~i~iwd~~~~~--~~-~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~~~~~ 458 (552)
++++++|+ + ..|++|+.||.|.+||..+.. +. ..-..|..+.-.+++.||++|++|++-+.|+++++||+++..+
T Consensus 319 ~~tsC~~nrdg~~iAagc~DGSIQ~W~~~~~~v~p~~~vk~AH~~g~~Itsi~FS~dg~~LlSRg~D~tLKvWDLrq~kk 398 (641)
T KOG0772|consen 319 PVTSCAWNRDGKLIAAGCLDGSIQIWDKGSRTVRPVMKVKDAHLPGQDITSISFSYDGNYLLSRGFDDTLKVWDLRQFKK 398 (641)
T ss_pred CceeeecCCCcchhhhcccCCceeeeecCCcccccceEeeeccCCCCceeEEEeccccchhhhccCCCceeeeecccccc
Confidence 78899999 4 489999999999999985532 23 3334454544555689999999999999999999999886444
Q ss_pred ee---ec----ccceEEEEEecCCEEEEEe------CCCeEEEEecCCCeeeeeeccCCCcccCcceEEEEEeC--CeEE
Q 008820 459 SM---QT----HKGSVFAVFLEGKWLFTGG------WDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQ--GKLF 523 (552)
Q Consensus 459 ~~---~~----h~~~v~~v~~~~~~l~sgs------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~~--~~l~ 523 (552)
.+ .+ ....=.+++|+.++|++|+ ..|++.+||..+-.....+... ...|..+.|+| ++++
T Consensus 399 pL~~~tgL~t~~~~tdc~FSPd~kli~TGtS~~~~~~~g~L~f~d~~t~d~v~ki~i~-----~aSvv~~~WhpkLNQi~ 473 (641)
T KOG0772|consen 399 PLNVRTGLPTPFPGTDCCFSPDDKLILTGTSAPNGMTAGTLFFFDRMTLDTVYKIDIS-----TASVVRCLWHPKLNQIF 473 (641)
T ss_pred chhhhcCCCccCCCCccccCCCceEEEecccccCCCCCceEEEEeccceeeEEEecCC-----CceEEEEeecchhhhee
Confidence 33 22 2223345677999999986 3478999998887665554432 55688899998 5699
Q ss_pred EEeCCCeEEEEE
Q 008820 524 VGCADRTVKIAL 535 (552)
Q Consensus 524 s~s~Dg~v~iw~ 535 (552)
.|+.||.++++-
T Consensus 474 ~gsgdG~~~vyY 485 (641)
T KOG0772|consen 474 AGSGDGTAHVYY 485 (641)
T ss_pred eecCCCceEEEE
Confidence 999999999974
No 92
>KOG0301 consensus Phospholipase A2-activating protein (contains WD40 repeats) [Lipid transport and metabolism]
Probab=99.93 E-value=5e-24 Score=206.78 Aligned_cols=244 Identities=27% Similarity=0.432 Sum_probs=199.2
Q ss_pred eEEEeeCCCeEEEEE-----------eecCccceEE-EEEc---CCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEE
Q 008820 233 DLVNGLSKGNVKFKD-----------LQGHRDCVTG-LAVG---GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMA 297 (552)
Q Consensus 233 ~~~~~~~~~~~~~~~-----------l~~H~~~V~~-l~~s---~~~l~s~s~dg~I~iwd~~~~~~~~~~~~h~~~v~~ 297 (552)
.+++++.++++++|. +.+|.+.|.. ++|. +..+++|+.|.+|.+|......++.++++|...|.+
T Consensus 27 ~i~s~sRd~t~~vw~~~~~~~l~~~~~~~~~g~i~~~i~y~e~~~~~l~~g~~D~~i~v~~~~~~~P~~~LkgH~snVC~ 106 (745)
T KOG0301|consen 27 CIISGSRDGTVKVWAKKGKQYLETHAFEGPKGFIANSICYAESDKGRLVVGGMDTTIIVFKLSQAEPLYTLKGHKSNVCS 106 (745)
T ss_pred EEeecCCCCceeeeeccCcccccceecccCcceeeccceeccccCcceEeecccceEEEEecCCCCchhhhhccccceee
Confidence 566777788888776 5668888877 7776 567999999999999999999999999999999999
Q ss_pred EEEecCCCCEEEEEcCCCcEEEEeCCCCCCCccccccccCCCceeeeEEEEee-CCCEEEEeeCCCcEEEEECCCCceeE
Q 008820 298 VVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTT-SGRYLYTGSGDRTIKAWSLLDGTLSC 376 (552)
Q Consensus 298 v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~sgs~dg~i~iwd~~~~~~~~ 376 (552)
+....++. +++||.|.++++|-.... ...+.+|.. .+.++.. ..+.++||+.|.+|++|.- ++.++
T Consensus 107 ls~~~~~~--~iSgSWD~TakvW~~~~l-----~~~l~gH~a----sVWAv~~l~e~~~vTgsaDKtIklWk~--~~~l~ 173 (745)
T KOG0301|consen 107 LSIGEDGT--LISGSWDSTAKVWRIGEL-----VYSLQGHTA----SVWAVASLPENTYVTGSADKTIKLWKG--GTLLK 173 (745)
T ss_pred eecCCcCc--eEecccccceEEecchhh-----hcccCCcch----heeeeeecCCCcEEeccCcceeeeccC--Cchhh
Confidence 98755443 799999999999987632 222333332 2222221 2238999999999999974 88999
Q ss_pred EecCCCCCeEEEEEeCC-EEEEEeCCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEECCCcEEEEeCCc
Q 008820 377 TMSGHKSAVSTLAVCNG-VLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDK 455 (552)
Q Consensus 377 ~~~~h~~~v~~l~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~~ 455 (552)
+|.+|.+-|..+++-++ .+++++.||.|+.|++ +|+++....+|. ..+.+ +....++..++++++|++++||+...
T Consensus 174 tf~gHtD~VRgL~vl~~~~flScsNDg~Ir~w~~-~ge~l~~~~ght-n~vYs-is~~~~~~~Ivs~gEDrtlriW~~~e 250 (745)
T KOG0301|consen 174 TFSGHTDCVRGLAVLDDSHFLSCSNDGSIRLWDL-DGEVLLEMHGHT-NFVYS-ISMALSDGLIVSTGEDRTLRIWKKDE 250 (745)
T ss_pred hhccchhheeeeEEecCCCeEeecCCceEEEEec-cCceeeeeeccc-eEEEE-EEecCCCCeEEEecCCceEEEeecCc
Confidence 99999999999999954 9999999999999999 788888887763 44554 46677888999999999999999999
Q ss_pred ceeeeecccceEEEEEe-cCCEEEEEeCCCeEEEEecC
Q 008820 456 FMKSMQTHKGSVFAVFL-EGKWLFTGGWDKTVSVQELA 492 (552)
Q Consensus 456 ~~~~~~~h~~~v~~v~~-~~~~l~sgs~dg~i~iwd~~ 492 (552)
+.+.+.-....|+++.. ...-+++|+.||.||||...
T Consensus 251 ~~q~I~lPttsiWsa~~L~NgDIvvg~SDG~VrVfT~~ 288 (745)
T KOG0301|consen 251 CVQVITLPTTSIWSAKVLLNGDIVVGGSDGRVRVFTVD 288 (745)
T ss_pred eEEEEecCccceEEEEEeeCCCEEEeccCceEEEEEec
Confidence 99999888889999876 55667888889999999876
No 93
>KOG0289 consensus mRNA splicing factor [General function prediction only]
Probab=99.93 E-value=1.3e-23 Score=193.22 Aligned_cols=273 Identities=20% Similarity=0.300 Sum_probs=215.5
Q ss_pred cceEEEEEc--CCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCcc
Q 008820 253 DCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEP 330 (552)
Q Consensus 253 ~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~ 330 (552)
..|.++... ...++||+.|.++.++|..+.+.+.+++||...|+.+.++++.. .+++++.|-.|++|..........
T Consensus 220 pgi~ald~~~s~~~ilTGG~d~~av~~d~~s~q~l~~~~Gh~kki~~v~~~~~~~-~v~~aSad~~i~vws~~~~s~~~~ 298 (506)
T KOG0289|consen 220 PGITALDIIPSSSKILTGGEDKTAVLFDKPSNQILATLKGHTKKITSVKFHKDLD-TVITASADEIIRVWSVPLSSEPTS 298 (506)
T ss_pred CCeeEEeecCCCCcceecCCCCceEEEecchhhhhhhccCcceEEEEEEeccchh-heeecCCcceEEeeccccccCccc
Confidence 356667666 48999999999999999999999999999999999999998654 679999999999999886654444
Q ss_pred ccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCceeEEecC--CCCCeEEEEEe-CC-EEEEEeCCCcEEE
Q 008820 331 LKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSG--HKSAVSTLAVC-NG-VLYSGSRDGTIRL 406 (552)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~--h~~~v~~l~~~-~~-~l~s~~~dg~i~i 406 (552)
...+... ..-...++.|+||++++.||+..+.|++++..+..... ..-.+++.+|+ |+ .|.+|..||.+++
T Consensus 299 ~~~h~~~-----V~~ls~h~tgeYllsAs~d~~w~Fsd~~~g~~lt~vs~~~s~v~~ts~~fHpDgLifgtgt~d~~vki 373 (506)
T KOG0289|consen 299 SRPHEEP-----VTGLSLHPTGEYLLSASNDGTWAFSDISSGSQLTVVSDETSDVEYTSAAFHPDGLIFGTGTPDGVVKI 373 (506)
T ss_pred ccccccc-----ceeeeeccCCcEEEEecCCceEEEEEccCCcEEEEEeeccccceeEEeeEcCCceEEeccCCCceEEE
Confidence 4433322 12346788999999999999999999999998776653 23458999999 55 7889999999999
Q ss_pred EECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEECCCcEEEEeCCcce--eeeecc-cceEEEEEe--cCCEEEEEe
Q 008820 407 WSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDKFM--KSMQTH-KGSVFAVFL--EGKWLFTGG 481 (552)
Q Consensus 407 wd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~~~~--~~~~~h-~~~v~~v~~--~~~~l~sgs 481 (552)
||+.++..+..|.+| .+.+.. +.|+.+|.+|+++++|+.|++||+++.. +++... ...+.+++| .|.+|+.++
T Consensus 374 wdlks~~~~a~Fpgh-t~~vk~-i~FsENGY~Lat~add~~V~lwDLRKl~n~kt~~l~~~~~v~s~~fD~SGt~L~~~g 451 (506)
T KOG0289|consen 374 WDLKSQTNVAKFPGH-TGPVKA-ISFSENGYWLATAADDGSVKLWDLRKLKNFKTIQLDEKKEVNSLSFDQSGTYLGIAG 451 (506)
T ss_pred EEcCCccccccCCCC-CCceeE-EEeccCceEEEEEecCCeEEEEEehhhcccceeeccccccceeEEEcCCCCeEEeec
Confidence 999999999999885 567776 6999999999999999999999998743 333322 236777777 799999998
Q ss_pred CCCeEEEEecCCCeeeeeeccCCCcccCcceEEEEEeC--CeEEEEeCCCeEEEEEe
Q 008820 482 WDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQ--GKLFVGCADRTVKIALC 536 (552)
Q Consensus 482 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~~--~~l~s~s~Dg~v~iw~~ 536 (552)
.|=.|++++-.+........... +.+..+.+.|.. ..++++|.|..++++.+
T Consensus 452 ~~l~Vy~~~k~~k~W~~~~~~~~---~sg~st~v~Fg~~aq~l~s~smd~~l~~~a~ 505 (506)
T KOG0289|consen 452 SDLQVYICKKKTKSWTEIKELAD---HSGLSTGVRFGEHAQYLASTSMDAILRLYAL 505 (506)
T ss_pred ceeEEEEEecccccceeeehhhh---cccccceeeecccceEEeeccchhheEEeec
Confidence 88778887755544433222221 245678888884 34889999999888764
No 94
>KOG0647 consensus mRNA export protein (contains WD40 repeats) [RNA processing and modification]
Probab=99.93 E-value=2e-23 Score=183.65 Aligned_cols=266 Identities=17% Similarity=0.213 Sum_probs=191.2
Q ss_pred cCccceEEEEEc---CCEEEEEeCCCcEEEEeCCC-CeEE-EEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCC
Q 008820 250 GHRDCVTGLAVG---GGFLFSSSFDKSIHVWSLKD-FSHV-HTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSF 324 (552)
Q Consensus 250 ~H~~~V~~l~~s---~~~l~s~s~dg~I~iwd~~~-~~~~-~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~ 324 (552)
.-++.|.+++|+ ..+++.+|.|++||+|+++. |..+ +....|.++|.+++|+.++ ..+++|+.|+.+++||+.+
T Consensus 25 pP~DsIS~l~FSP~~~~~~~A~SWD~tVR~wevq~~g~~~~ka~~~~~~PvL~v~Wsddg-skVf~g~~Dk~~k~wDL~S 103 (347)
T KOG0647|consen 25 PPEDSISALAFSPQADNLLAAGSWDGTVRIWEVQNSGQLVPKAQQSHDGPVLDVCWSDDG-SKVFSGGCDKQAKLWDLAS 103 (347)
T ss_pred CcccchheeEeccccCceEEecccCCceEEEEEecCCcccchhhhccCCCeEEEEEccCC-ceEEeeccCCceEEEEccC
Confidence 346789999999 67788999999999999986 3332 4456799999999999877 5779999999999999998
Q ss_pred CCCCccccccccCCCceeeeEEEEeeCC-CEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEeCCEEEEEeCCCc
Q 008820 325 PLGHEPLKKWNEEKDWRYSGIHALTTSG-RYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVCNGVLYSGSRDGT 403 (552)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~~~dg~ 403 (552)
++. ..+.. |.. ....+..+..-. ..|++||.|++|+.||.++..++.++. -...++++..-..+++.+..+..
T Consensus 104 ~Q~-~~v~~---Hd~-pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R~~~pv~t~~-LPeRvYa~Dv~~pm~vVata~r~ 177 (347)
T KOG0647|consen 104 GQV-SQVAA---HDA-PVKTCHWVPGMNYQCLVTGSWDKTLKFWDTRSSNPVATLQ-LPERVYAADVLYPMAVVATAERH 177 (347)
T ss_pred CCe-eeeee---ccc-ceeEEEEecCCCcceeEecccccceeecccCCCCeeeeee-ccceeeehhccCceeEEEecCCc
Confidence 732 22222 211 222333333222 389999999999999999999998887 45668888877779999999999
Q ss_pred EEEEECCCCceeE-EEecCCCCceEEEEEEcCCCCEEEEEECCCcEEEEeCC----cceeeeecccc---------eEEE
Q 008820 404 IRLWSLSDHSLLT-VLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRND----KFMKSMQTHKG---------SVFA 469 (552)
Q Consensus 404 i~iwd~~~~~~~~-~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~----~~~~~~~~h~~---------~v~~ 469 (552)
|.+|+++++.... ......+-.+.+ ++.-.+....+.|+-.|.+.|..+. +.-.+++.|.. .|++
T Consensus 178 i~vynL~n~~te~k~~~SpLk~Q~R~-va~f~d~~~~alGsiEGrv~iq~id~~~~~~nFtFkCHR~~~~~~~~VYaVNs 256 (347)
T KOG0647|consen 178 IAVYNLENPPTEFKRIESPLKWQTRC-VACFQDKDGFALGSIEGRVAIQYIDDPNPKDNFTFKCHRSTNSVNDDVYAVNS 256 (347)
T ss_pred EEEEEcCCCcchhhhhcCcccceeeE-EEEEecCCceEeeeecceEEEEecCCCCccCceeEEEeccCCCCCCceEEecc
Confidence 9999998765432 223222233344 5666666667999999999998643 33446677763 4555
Q ss_pred EEe--cCCEEEEEeCCCeEEEEecCCCeeeeeeccCCCcccCcceEEEEEe-CCe--EEEEeCC
Q 008820 470 VFL--EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYW-QGK--LFVGCAD 528 (552)
Q Consensus 470 v~~--~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~-~~~--l~s~s~D 528 (552)
++| .-..|+|++.||+..+||-........... +..+|++.+|+ +|. .+..+.|
T Consensus 257 i~FhP~hgtlvTaGsDGtf~FWDkdar~kLk~s~~-----~~qpItcc~fn~~G~ifaYA~gYD 315 (347)
T KOG0647|consen 257 IAFHPVHGTLVTAGSDGTFSFWDKDARTKLKTSET-----HPQPITCCSFNRNGSIFAYALGYD 315 (347)
T ss_pred eEeecccceEEEecCCceEEEecchhhhhhhccCc-----CCCccceeEecCCCCEEEEEeecc
Confidence 666 677899999999999999876544333222 36779999998 444 2234444
No 95
>KOG0264 consensus Nucleosome remodeling factor, subunit CAF1/NURF55/MSI1 [Chromatin structure and dynamics]
Probab=99.93 E-value=4.7e-24 Score=197.84 Aligned_cols=253 Identities=16% Similarity=0.244 Sum_probs=199.2
Q ss_pred eCCCeEEEEEeecCccceEEEEEc---CCEEEEEeCCCcEEEEeCCCC----------eEEEEEeCCCCCeEEEEEecCC
Q 008820 238 LSKGNVKFKDLQGHRDCVTGLAVG---GGFLFSSSFDKSIHVWSLKDF----------SHVHTFKGHDHKVMAVVYVDED 304 (552)
Q Consensus 238 ~~~~~~~~~~l~~H~~~V~~l~~s---~~~l~s~s~dg~I~iwd~~~~----------~~~~~~~~h~~~v~~v~~~~~~ 304 (552)
...+.+++...--|.+.|+.+.+- ...+++.+..+.|.|||..+. .+-.++.+|...-++++|++..
T Consensus 110 ~~~~~v~i~~~i~h~gEVnRaRymPQnp~iVAt~t~~~dv~Vfd~tk~~s~~~~~~~~~Pdl~L~gH~~eg~glsWn~~~ 189 (422)
T KOG0264|consen 110 AVSGKVEISQKINHDGEVNRARYMPQNPNIVATKTSSGDVYVFDYTKHPSKPKASGECRPDLRLKGHEKEGYGLSWNRQQ 189 (422)
T ss_pred ccccceEEEEeccCCccchhhhhCCCCCcEEEecCCCCCEEEEEeccCCCcccccccCCCceEEEeeccccccccccccc
Confidence 345677777788899999999987 788899999999999998642 2223788999988999999999
Q ss_pred CCEEEEEcCCCcEEEEeCCCCCCC----ccccccccCCCceeeeEEEEee-CCCEEEEeeCCCcEEEEECC--CCceeEE
Q 008820 305 QPLCISGDSGGGIFVWSFSFPLGH----EPLKKWNEEKDWRYSGIHALTT-SGRYLYTGSGDRTIKAWSLL--DGTLSCT 377 (552)
Q Consensus 305 ~~~l~s~~~dg~i~vwd~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~-~~~~l~sgs~dg~i~iwd~~--~~~~~~~ 377 (552)
...+++++.|++|++||+...... .+...+..+.. ....+ +|++ +.+.|++++.|+.+.|||++ +.++...
T Consensus 190 ~g~Lls~~~d~~i~lwdi~~~~~~~~~~~p~~~~~~h~~-~VeDV-~~h~~h~~lF~sv~dd~~L~iwD~R~~~~~~~~~ 267 (422)
T KOG0264|consen 190 EGTLLSGSDDHTICLWDINAESKEDKVVDPKTIFSGHED-VVEDV-AWHPLHEDLFGSVGDDGKLMIWDTRSNTSKPSHS 267 (422)
T ss_pred ceeEeeccCCCcEEEEeccccccCCccccceEEeecCCc-ceehh-hccccchhhheeecCCCeEEEEEcCCCCCCCccc
Confidence 999999999999999999865542 22223333322 22222 4444 45589999999999999999 5667778
Q ss_pred ecCCCCCeEEEEEe---CCEEEEEeCCCcEEEEECCCCc-eeEEEecCCCCceEEEEEEcCCC-CEEEEEECCCcEEEEe
Q 008820 378 MSGHKSAVSTLAVC---NGVLYSGSRDGTIRLWSLSDHS-LLTVLEEDSSGAVSSVLSLTAVQ-HTLVVSHESGSIKVWR 452 (552)
Q Consensus 378 ~~~h~~~v~~l~~~---~~~l~s~~~dg~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~s~~~-~~l~~g~~dg~i~iwd 452 (552)
..+|.++|+|++|+ +..||+||.|++|++||+|+.+ +++++..| ...+.. +.|+|+. ..|++++.|+.+.+||
T Consensus 268 ~~ah~~~vn~~~fnp~~~~ilAT~S~D~tV~LwDlRnL~~~lh~~e~H-~dev~~-V~WSPh~etvLASSg~D~rl~vWD 345 (422)
T KOG0264|consen 268 VKAHSAEVNCVAFNPFNEFILATGSADKTVALWDLRNLNKPLHTFEGH-EDEVFQ-VEWSPHNETVLASSGTDRRLNVWD 345 (422)
T ss_pred ccccCCceeEEEeCCCCCceEEeccCCCcEEEeechhcccCceeccCC-CcceEE-EEeCCCCCceeEecccCCcEEEEe
Confidence 88999999999999 3499999999999999999865 57777766 455555 5888875 5788889999999999
Q ss_pred CCc----------------ceeeeecccceEEEEEe---cCCEEEEEeCCCeEEEEecCCC
Q 008820 453 NDK----------------FMKSMQTHKGSVFAVFL---EGKWLFTGGWDKTVSVQELAGD 494 (552)
Q Consensus 453 ~~~----------------~~~~~~~h~~~v~~v~~---~~~~l~sgs~dg~i~iwd~~~~ 494 (552)
+.+ ++..-.||+..|..++| ..-.++|.+.|+.+.||++...
T Consensus 346 ls~ig~eq~~eda~dgppEllF~HgGH~~kV~DfsWnp~ePW~I~SvaeDN~LqIW~~s~~ 406 (422)
T KOG0264|consen 346 LSRIGEEQSPEDAEDGPPELLFIHGGHTAKVSDFSWNPNEPWTIASVAEDNILQIWQMAEN 406 (422)
T ss_pred ccccccccChhhhccCCcceeEEecCcccccccccCCCCCCeEEEEecCCceEEEeecccc
Confidence 642 23455789999999998 4557889999999999998753
No 96
>KOG0639 consensus Transducin-like enhancer of split protein (contains WD40 repeats) [Chromatin structure and dynamics]
Probab=99.93 E-value=3e-24 Score=200.61 Aligned_cols=273 Identities=17% Similarity=0.309 Sum_probs=214.9
Q ss_pred cCccceEEEEEc--CCEEEEEeCCCcEEEEeCCCC---eEEEEEe--CCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeC
Q 008820 250 GHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDF---SHVHTFK--GHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSF 322 (552)
Q Consensus 250 ~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~---~~~~~~~--~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~ 322 (552)
.|..-|.++.++ .++++||+. |.|+|||+... .++..+. .....|.++..+|++. .|++|+.-.++.|||+
T Consensus 417 ~HGEvVcAvtIS~~trhVyTgGk-gcVKVWdis~pg~k~PvsqLdcl~rdnyiRSckL~pdgr-tLivGGeastlsiWDL 494 (705)
T KOG0639|consen 417 AHGEVVCAVTISNPTRHVYTGGK-GCVKVWDISQPGNKSPVSQLDCLNRDNYIRSCKLLPDGR-TLIVGGEASTLSIWDL 494 (705)
T ss_pred ccCcEEEEEEecCCcceeEecCC-CeEEEeeccCCCCCCccccccccCcccceeeeEecCCCc-eEEeccccceeeeeec
Confidence 588888889998 889999985 57999998642 2333333 2456788999999776 5577888999999999
Q ss_pred CCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe-CC-EEEEEeC
Q 008820 323 SFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC-NG-VLYSGSR 400 (552)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~-~~-~l~s~~~ 400 (552)
..+............ ..+...++++|.+..+++..||.|.|||+.+...++.|.+|.+.+.||.++ ++ .|.+|+.
T Consensus 495 AapTprikaeltssa---paCyALa~spDakvcFsccsdGnI~vwDLhnq~~VrqfqGhtDGascIdis~dGtklWTGGl 571 (705)
T KOG0639|consen 495 AAPTPRIKAELTSSA---PACYALAISPDAKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISKDGTKLWTGGL 571 (705)
T ss_pred cCCCcchhhhcCCcc---hhhhhhhcCCccceeeeeccCCcEEEEEcccceeeecccCCCCCceeEEecCCCceeecCCC
Confidence 876543222211111 222345788999999999999999999999999999999999999999999 44 9999999
Q ss_pred CCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEECCCcEEEEeCCc-ceeeeecccceEEEEEe--cCCEE
Q 008820 401 DGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDK-FMKSMQTHKGSVFAVFL--EGKWL 477 (552)
Q Consensus 401 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~~-~~~~~~~h~~~v~~v~~--~~~~l 477 (552)
|++||.||+++++.+...... ..+.+ +.++|++.++++|-.++.+.+....+ ....+..|...|.++.| .|+++
T Consensus 572 DntvRcWDlregrqlqqhdF~--SQIfS-Lg~cP~~dWlavGMens~vevlh~skp~kyqlhlheScVLSlKFa~cGkwf 648 (705)
T KOG0639|consen 572 DNTVRCWDLREGRQLQQHDFS--SQIFS-LGYCPTGDWLAVGMENSNVEVLHTSKPEKYQLHLHESCVLSLKFAYCGKWF 648 (705)
T ss_pred ccceeehhhhhhhhhhhhhhh--hhhee-cccCCCccceeeecccCcEEEEecCCccceeecccccEEEEEEecccCcee
Confidence 999999999999877655443 33444 68899999999999999999998654 45677889999999988 89999
Q ss_pred EEEeCCCeEEEEecCCCeeeeeeccCCCcccCcceEEEEEe--CCeEEEEeCCCeEEEEEe
Q 008820 478 FTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYW--QGKLFVGCADRTVKIALC 536 (552)
Q Consensus 478 ~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~s~Dg~v~iw~~ 536 (552)
++.+.|+.+..|...-+........ .+.|.++..+ +.+++||+.|..-.+|.+
T Consensus 649 vStGkDnlLnawrtPyGasiFqskE------~SsVlsCDIS~ddkyIVTGSGdkkATVYeV 703 (705)
T KOG0639|consen 649 VSTGKDNLLNAWRTPYGASIFQSKE------SSSVLSCDISFDDKYIVTGSGDKKATVYEV 703 (705)
T ss_pred eecCchhhhhhccCccccceeeccc------cCcceeeeeccCceEEEecCCCcceEEEEE
Confidence 9999999999999876644443322 4557666666 556999999998888875
No 97
>KOG1446 consensus Histone H3 (Lys4) methyltransferase complex and RNA cleavage factor II complex, subunit SWD2 [RNA processing and modification; Chromatin structure and dynamics; Posttranslational modification, protein turnover, chaperones]
Probab=99.93 E-value=2.2e-22 Score=178.78 Aligned_cols=269 Identities=16% Similarity=0.203 Sum_probs=218.5
Q ss_pred CCccccceeeecCcceEEEeeCCCeEEEEE---------eecCccceEEEEEc--CCEEEEEeC--CCcEEEEeCCCCeE
Q 008820 218 DGADIDQARAAGGVKDLVNGLSKGNVKFKD---------LQGHRDCVTGLAVG--GGFLFSSSF--DKSIHVWSLKDFSH 284 (552)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------l~~H~~~V~~l~~s--~~~l~s~s~--dg~I~iwd~~~~~~ 284 (552)
....+.++.++..+..+++...+..+++++ +..++-.|..++|. ...++.++. |.+||.-++.+.+.
T Consensus 13 ~~~~i~sl~fs~~G~~litss~dDsl~LYd~~~g~~~~ti~skkyG~~~~~Fth~~~~~i~sStk~d~tIryLsl~dNky 92 (311)
T KOG1446|consen 13 TNGKINSLDFSDDGLLLITSSEDDSLRLYDSLSGKQVKTINSKKYGVDLACFTHHSNTVIHSSTKEDDTIRYLSLHDNKY 92 (311)
T ss_pred CCCceeEEEecCCCCEEEEecCCCeEEEEEcCCCceeeEeecccccccEEEEecCCceEEEccCCCCCceEEEEeecCce
Confidence 345578889999999999988887777776 34455578888886 667777766 88999999999999
Q ss_pred EEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcE
Q 008820 285 VHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTI 364 (552)
Q Consensus 285 ~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i 364 (552)
++.|.||...|++++.+|-+ ..+++++.|++|++||++..++...+.. ...++.++.|.|-++|++.....|
T Consensus 93 lRYF~GH~~~V~sL~~sP~~-d~FlS~S~D~tvrLWDlR~~~cqg~l~~-------~~~pi~AfDp~GLifA~~~~~~~I 164 (311)
T KOG1446|consen 93 LRYFPGHKKRVNSLSVSPKD-DTFLSSSLDKTVRLWDLRVKKCQGLLNL-------SGRPIAAFDPEGLIFALANGSELI 164 (311)
T ss_pred EEEcCCCCceEEEEEecCCC-CeEEecccCCeEEeeEecCCCCceEEec-------CCCcceeECCCCcEEEEecCCCeE
Confidence 99999999999999999976 5779999999999999997665544433 223577999999999999988899
Q ss_pred EEEECCCC--ceeEEec---CCCCCeEEEEEe-CC-EEEEEeCCCcEEEEECCCCceeEEEecCCCCc-eEEEEEEcCCC
Q 008820 365 KAWSLLDG--TLSCTMS---GHKSAVSTLAVC-NG-VLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGA-VSSVLSLTAVQ 436 (552)
Q Consensus 365 ~iwd~~~~--~~~~~~~---~h~~~v~~l~~~-~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~-~~~~~~~s~~~ 436 (552)
++||++.- .+-.++. +.....+.|.|+ ++ .++.+...+.+++.|.-+|..+.++..+.... .....+|+||+
T Consensus 165 kLyD~Rs~dkgPF~tf~i~~~~~~ew~~l~FS~dGK~iLlsT~~s~~~~lDAf~G~~~~tfs~~~~~~~~~~~a~ftPds 244 (311)
T KOG1446|consen 165 KLYDLRSFDKGPFTTFSITDNDEAEWTDLEFSPDGKSILLSTNASFIYLLDAFDGTVKSTFSGYPNAGNLPLSATFTPDS 244 (311)
T ss_pred EEEEecccCCCCceeEccCCCCccceeeeEEcCCCCEEEEEeCCCcEEEEEccCCcEeeeEeeccCCCCcceeEEECCCC
Confidence 99999853 3444443 346788999999 44 88889999999999999999998887764333 23336899999
Q ss_pred CEEEEEECCCcEEEEeCC--cceeeeec-ccceEEEEEecCCEEEEEeCCCeEEEEecCCC
Q 008820 437 HTLVVSHESGSIKVWRND--KFMKSMQT-HKGSVFAVFLEGKWLFTGGWDKTVSVQELAGD 494 (552)
Q Consensus 437 ~~l~~g~~dg~i~iwd~~--~~~~~~~~-h~~~v~~v~~~~~~l~sgs~dg~i~iwd~~~~ 494 (552)
+++++|+.||+|.+|+.. ..+..+.+ +.+++.++.|+.++....+.+..+.+|=....
T Consensus 245 ~Fvl~gs~dg~i~vw~~~tg~~v~~~~~~~~~~~~~~~fnP~~~mf~sa~s~l~fw~p~~~ 305 (311)
T KOG1446|consen 245 KFVLSGSDDGTIHVWNLETGKKVAVLRGPNGGPVSCVRFNPRYAMFVSASSNLVFWLPDED 305 (311)
T ss_pred cEEEEecCCCcEEEEEcCCCcEeeEecCCCCCCccccccCCceeeeeecCceEEEEecccc
Confidence 999999999999999964 46667777 78899999999998888888899999966543
No 98
>KOG4283 consensus Transcription-coupled repair protein CSA, contains WD40 domain [Transcription; Replication, recombination and repair]
Probab=99.92 E-value=2.3e-23 Score=182.52 Aligned_cols=277 Identities=21% Similarity=0.323 Sum_probs=199.6
Q ss_pred ecCccceEEEEEc---CCEEEEEeCCCcEEEEeCCCCe----------EEEE-----EeCCCCCeEEEEEecCCCCEEEE
Q 008820 249 QGHRDCVTGLAVG---GGFLFSSSFDKSIHVWSLKDFS----------HVHT-----FKGHDHKVMAVVYVDEDQPLCIS 310 (552)
Q Consensus 249 ~~H~~~V~~l~~s---~~~l~s~s~dg~I~iwd~~~~~----------~~~~-----~~~h~~~v~~v~~~~~~~~~l~s 310 (552)
.-|.+.|+++... |+++++|+.||.|.+||+++.. .... -.+|.-.|.++.|.|-+.-++.+
T Consensus 40 r~HgGsvNsL~id~tegrymlSGgadgsi~v~Dl~n~t~~e~s~li~k~~c~v~~~h~~~Hky~iss~~WyP~DtGmFts 119 (397)
T KOG4283|consen 40 RPHGGSVNSLQIDLTEGRYMLSGGADGSIAVFDLQNATDYEASGLIAKHKCIVAKQHENGHKYAISSAIWYPIDTGMFTS 119 (397)
T ss_pred ccCCCccceeeeccccceEEeecCCCccEEEEEeccccchhhccceeheeeeccccCCccceeeeeeeEEeeecCceeec
Confidence 4688999999998 9999999999999999997532 1111 13578899999999999999999
Q ss_pred EcCCCcEEEEeCCCCCCCccccccccCCCceeeeEEEEee---CCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEE
Q 008820 311 GDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTT---SGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVST 387 (552)
Q Consensus 311 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~ 387 (552)
++.|.++++||.++.+....+.... ... -.+++| .-.++++|..|-.|++.|+.+|...+++.+|.+.|.+
T Consensus 120 sSFDhtlKVWDtnTlQ~a~~F~me~---~VY---shamSp~a~sHcLiA~gtr~~~VrLCDi~SGs~sH~LsGHr~~vla 193 (397)
T KOG4283|consen 120 SSFDHTLKVWDTNTLQEAVDFKMEG---KVY---SHAMSPMAMSHCLIAAGTRDVQVRLCDIASGSFSHTLSGHRDGVLA 193 (397)
T ss_pred ccccceEEEeecccceeeEEeecCc---eee---hhhcChhhhcceEEEEecCCCcEEEEeccCCcceeeeccccCceEE
Confidence 9999999999998765433332211 100 123333 2348899999999999999999999999999999999
Q ss_pred EEEeCC---EEEEEeCCCcEEEEECCCC-ceeEEEecC-------------CCCceEEEEEEcCCCCEEEEEECCCcEEE
Q 008820 388 LAVCNG---VLYSGSRDGTIRLWSLSDH-SLLTVLEED-------------SSGAVSSVLSLTAVQHTLVVSHESGSIKV 450 (552)
Q Consensus 388 l~~~~~---~l~s~~~dg~i~iwd~~~~-~~~~~~~~~-------------~~~~~~~~~~~s~~~~~l~~g~~dg~i~i 450 (552)
+.|++. .|++|+.||.|++||++.. .+...+..+ +.+.+.. ++|+.++.++++++.|..+++
T Consensus 194 V~Wsp~~e~vLatgsaDg~irlWDiRrasgcf~~lD~hn~k~~p~~~~n~ah~gkvng-la~tSd~~~l~~~gtd~r~r~ 272 (397)
T KOG4283|consen 194 VEWSPSSEWVLATGSADGAIRLWDIRRASGCFRVLDQHNTKRPPILKTNTAHYGKVNG-LAWTSDARYLASCGTDDRIRV 272 (397)
T ss_pred EEeccCceeEEEecCCCceEEEEEeecccceeEEeecccCccCccccccccccceeee-eeecccchhhhhccCccceEE
Confidence 999933 8899999999999999865 344444333 2334444 689999999999999999999
Q ss_pred EeCCcceeeeec-----ccceE---EEE-EecCCEEEEEeCCCeEEEEecCCCeeeeeeccCCCcccCcceEEEEEeCCe
Q 008820 451 WRNDKFMKSMQT-----HKGSV---FAV-FLEGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQGK 521 (552)
Q Consensus 451 wd~~~~~~~~~~-----h~~~v---~~v-~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~ 521 (552)
|+..+...++.. |...+ .-+ +.+...++---.++.+.++++-.+........+ ...+.+.++.++.
T Consensus 273 wn~~~G~ntl~~~g~~~~n~~~~~~~~~~~~~s~vfv~~p~~~~lall~~~sgs~ir~l~~h-----~k~i~c~~~~~~f 347 (397)
T KOG4283|consen 273 WNMESGRNTLREFGPIIHNQTTSFAVHIQSMDSDVFVLFPNDGSLALLNLLEGSFVRRLSTH-----LKRINCAAYRPDF 347 (397)
T ss_pred eecccCcccccccccccccccccceEEEeecccceEEEEecCCeEEEEEccCceEEEeeecc-----cceeeEEeecCch
Confidence 986543222221 11100 001 123333333344577777777666555444432 4457777777764
Q ss_pred --EEEEeCCCeEEEEEec
Q 008820 522 --LFVGCADRTVKIALCN 537 (552)
Q Consensus 522 --l~s~s~Dg~v~iw~~~ 537 (552)
..+|..|+.|..|...
T Consensus 348 q~~~tg~~d~ni~~w~p~ 365 (397)
T KOG4283|consen 348 EQCFTGDMNGNIYMWSPA 365 (397)
T ss_pred hhhhccccCCcccccccc
Confidence 9999999999999874
No 99
>KOG0264 consensus Nucleosome remodeling factor, subunit CAF1/NURF55/MSI1 [Chromatin structure and dynamics]
Probab=99.92 E-value=9e-24 Score=196.00 Aligned_cols=242 Identities=17% Similarity=0.273 Sum_probs=186.2
Q ss_pred CCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCcccc-------ccccCCCceeeeEEEEeeCCC-EEEEeeCC
Q 008820 290 GHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLK-------KWNEEKDWRYSGIHALTTSGR-YLYTGSGD 361 (552)
Q Consensus 290 ~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~-~l~sgs~d 361 (552)
.|.+.|+.+.+.|++..++++.+..+.+.|||........... .+.+|... ..-.++++... .+++|+.|
T Consensus 122 ~h~gEVnRaRymPQnp~iVAt~t~~~dv~Vfd~tk~~s~~~~~~~~~Pdl~L~gH~~e--g~glsWn~~~~g~Lls~~~d 199 (422)
T KOG0264|consen 122 NHDGEVNRARYMPQNPNIVATKTSSGDVYVFDYTKHPSKPKASGECRPDLRLKGHEKE--GYGLSWNRQQEGTLLSGSDD 199 (422)
T ss_pred cCCccchhhhhCCCCCcEEEecCCCCCEEEEEeccCCCcccccccCCCceEEEeeccc--ccccccccccceeEeeccCC
Confidence 4999999999999999999999999999999987543222211 22233321 11124444333 89999999
Q ss_pred CcEEEEECCCC-------ceeEEecCCCCCeEEEEEe---CCEEEEEeCCCcEEEEECCC--CceeEEEecCCCCceEEE
Q 008820 362 RTIKAWSLLDG-------TLSCTMSGHKSAVSTLAVC---NGVLYSGSRDGTIRLWSLSD--HSLLTVLEEDSSGAVSSV 429 (552)
Q Consensus 362 g~i~iwd~~~~-------~~~~~~~~h~~~v~~l~~~---~~~l~s~~~dg~i~iwd~~~--~~~~~~~~~~~~~~~~~~ 429 (552)
++|++||+... .+...+.+|...|..++|+ .+++++++.|+.+.|||+|+ .++.+....| .+.+.+
T Consensus 200 ~~i~lwdi~~~~~~~~~~~p~~~~~~h~~~VeDV~~h~~h~~lF~sv~dd~~L~iwD~R~~~~~~~~~~~ah-~~~vn~- 277 (422)
T KOG0264|consen 200 HTICLWDINAESKEDKVVDPKTIFSGHEDVVEDVAWHPLHEDLFGSVGDDGKLMIWDTRSNTSKPSHSVKAH-SAEVNC- 277 (422)
T ss_pred CcEEEEeccccccCCccccceEEeecCCcceehhhccccchhhheeecCCCeEEEEEcCCCCCCCccccccc-CCceeE-
Confidence 99999999743 2355678999999999999 55999999999999999995 4445555544 556666
Q ss_pred EEEcC-CCCEEEEEECCCcEEEEeCCc---ceeeeecccceEEEEEe---cCCEEEEEeCCCeEEEEecCCCeeee----
Q 008820 430 LSLTA-VQHTLVVSHESGSIKVWRNDK---FMKSMQTHKGSVFAVFL---EGKWLFTGGWDKTVSVQELAGDEFEE---- 498 (552)
Q Consensus 430 ~~~s~-~~~~l~~g~~dg~i~iwd~~~---~~~~~~~h~~~v~~v~~---~~~~l~sgs~dg~i~iwd~~~~~~~~---- 498 (552)
++|+| ++..||+|+.|++|.+||+++ ++.++.+|...|.++.| ....|++++.|+.+.+||+..-....
T Consensus 278 ~~fnp~~~~ilAT~S~D~tV~LwDlRnL~~~lh~~e~H~dev~~V~WSPh~etvLASSg~D~rl~vWDls~ig~eq~~ed 357 (422)
T KOG0264|consen 278 VAFNPFNEFILATGSADKTVALWDLRNLNKPLHTFEGHEDEVFQVEWSPHNETVLASSGTDRRLNVWDLSRIGEEQSPED 357 (422)
T ss_pred EEeCCCCCceEEeccCCCcEEEeechhcccCceeccCCCcceEEEEeCCCCCceeEecccCCcEEEEeccccccccChhh
Confidence 57776 456788999999999999764 67788999999999988 67799999999999999997422211
Q ss_pred --------eeccCCCcccCcceEEEEEeCCe---EEEEeCCCeEEEEEecC
Q 008820 499 --------DVIPTGAIPCGSVITALLYWQGK---LFVGCADRTVKIALCNR 538 (552)
Q Consensus 499 --------~~~~~~~~~~~~~v~~l~~~~~~---l~s~s~Dg~v~iw~~~~ 538 (552)
.+.+.+ |...|+.+.|+|.. +++++.|+.+.||+...
T Consensus 358 a~dgppEllF~HgG---H~~kV~DfsWnp~ePW~I~SvaeDN~LqIW~~s~ 405 (422)
T KOG0264|consen 358 AEDGPPELLFIHGG---HTAKVSDFSWNPNEPWTIASVAEDNILQIWQMAE 405 (422)
T ss_pred hccCCcceeEEecC---cccccccccCCCCCCeEEEEecCCceEEEeeccc
Confidence 233433 37779999999754 99999999999999873
No 100
>KOG1332 consensus Vesicle coat complex COPII, subunit SEC13 [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.92 E-value=8.6e-24 Score=180.54 Aligned_cols=245 Identities=18% Similarity=0.193 Sum_probs=182.0
Q ss_pred eecCccceEEEEEc--CCEEEEEeCCCcEEEEeCCCC---eEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeC
Q 008820 248 LQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDF---SHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSF 322 (552)
Q Consensus 248 l~~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~---~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~ 322 (552)
..+|++.|..+... |++|+||+.|++|+|+...+. +++.++.||.++|..++|....
T Consensus 7 dt~H~D~IHda~lDyygkrlATcsSD~tVkIf~v~~n~~s~ll~~L~Gh~GPVwqv~wahPk------------------ 68 (299)
T KOG1332|consen 7 DTQHEDMIHDAQLDYYGKRLATCSSDGTVKIFEVRNNGQSKLLAELTGHSGPVWKVAWAHPK------------------ 68 (299)
T ss_pred hhhhhhhhhHhhhhhhcceeeeecCCccEEEEEEcCCCCceeeeEecCCCCCeeEEeecccc------------------
Confidence 35799999988776 999999999999999998753 5688999999999999995311
Q ss_pred CCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCc--eeEEecCCCCCeEEEEEeCC----EEE
Q 008820 323 SFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGT--LSCTMSGHKSAVSTLAVCNG----VLY 396 (552)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~--~~~~~~~h~~~v~~l~~~~~----~l~ 396 (552)
.|+.|++++.||.|.||.-.+++ .......|...|++++|.+. .|+
T Consensus 69 ----------------------------~G~iLAScsYDgkVIiWke~~g~w~k~~e~~~h~~SVNsV~wapheygl~La 120 (299)
T KOG1332|consen 69 ----------------------------FGTILASCSYDGKVIIWKEENGRWTKAYEHAAHSASVNSVAWAPHEYGLLLA 120 (299)
T ss_pred ----------------------------cCcEeeEeecCceEEEEecCCCchhhhhhhhhhcccceeecccccccceEEE
Confidence 23456666666666666655553 23345679999999999832 899
Q ss_pred EEeCCCcEEEEECCCC--ceeEEEecCCCCceEEEEEEcCC---C-----------CEEEEEECCCcEEEEeCCc----c
Q 008820 397 SGSRDGTIRLWSLSDH--SLLTVLEEDSSGAVSSVLSLTAV---Q-----------HTLVVSHESGSIKVWRNDK----F 456 (552)
Q Consensus 397 s~~~dg~i~iwd~~~~--~~~~~~~~~~~~~~~~~~~~s~~---~-----------~~l~~g~~dg~i~iwd~~~----~ 456 (552)
+++.||.|.+.+.++. -....+...|.-.+.+ +++.|. | +.|++|+.|..|+||+... .
T Consensus 121 casSDG~vsvl~~~~~g~w~t~ki~~aH~~Gvns-Vswapa~~~g~~~~~~~~~~~krlvSgGcDn~VkiW~~~~~~w~~ 199 (299)
T KOG1332|consen 121 CASSDGKVSVLTYDSSGGWTTSKIVFAHEIGVNS-VSWAPASAPGSLVDQGPAAKVKRLVSGGCDNLVKIWKFDSDSWKL 199 (299)
T ss_pred EeeCCCcEEEEEEcCCCCccchhhhhccccccce-eeecCcCCCccccccCcccccceeeccCCccceeeeecCCcchhh
Confidence 9999999999998764 2233333333334444 466654 3 5699999999999998543 4
Q ss_pred eeeeecccceEEEEEe------cCCEEEEEeCCCeEEEEecCCCeeeeeeccCCCcccCcceEEEEEe--CCeEEEEeCC
Q 008820 457 MKSMQTHKGSVFAVFL------EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYW--QGKLFVGCAD 528 (552)
Q Consensus 457 ~~~~~~h~~~v~~v~~------~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~s~D 528 (552)
.+.+.+|...|+.++| --.+|+++|.||++.||..+............. ....+..+.|+ .+.|++++.|
T Consensus 200 e~~l~~H~dwVRDVAwaP~~gl~~s~iAS~SqDg~viIwt~~~e~e~wk~tll~~--f~~~~w~vSWS~sGn~LaVs~Gd 277 (299)
T KOG1332|consen 200 ERTLEGHKDWVRDVAWAPSVGLPKSTIASCSQDGTVIIWTKDEEYEPWKKTLLEE--FPDVVWRVSWSLSGNILAVSGGD 277 (299)
T ss_pred hhhhhhcchhhhhhhhccccCCCceeeEEecCCCcEEEEEecCccCccccccccc--CCcceEEEEEeccccEEEEecCC
Confidence 5568999999999886 245899999999999998773322222222111 26678999998 4669999999
Q ss_pred CeEEEEEecCCcc
Q 008820 529 RTVKIALCNRQIP 541 (552)
Q Consensus 529 g~v~iw~~~~~~~ 541 (552)
+.|.+|.-+.+++
T Consensus 278 Nkvtlwke~~~Gk 290 (299)
T KOG1332|consen 278 NKVTLWKENVDGK 290 (299)
T ss_pred cEEEEEEeCCCCc
Confidence 9999999876554
No 101
>KOG2055 consensus WD40 repeat protein [General function prediction only]
Probab=99.92 E-value=9.6e-23 Score=189.06 Aligned_cols=280 Identities=10% Similarity=0.183 Sum_probs=221.1
Q ss_pred ccceEEEEEc--CCEEEEEeCCCcEEEEeCCC--CeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCC
Q 008820 252 RDCVTGLAVG--GGFLFSSSFDKSIHVWSLKD--FSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLG 327 (552)
Q Consensus 252 ~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~--~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~ 327 (552)
.+.|+++.|+ ...+++|+.|++++||.++. ...++.+.-...+|.+.+|.|+|...+++++....++.||+.+.+.
T Consensus 213 ~~~I~sv~FHp~~plllvaG~d~~lrifqvDGk~N~~lqS~~l~~fPi~~a~f~p~G~~~i~~s~rrky~ysyDle~ak~ 292 (514)
T KOG2055|consen 213 HGGITSVQFHPTAPLLLVAGLDGTLRIFQVDGKVNPKLQSIHLEKFPIQKAEFAPNGHSVIFTSGRRKYLYSYDLETAKV 292 (514)
T ss_pred cCCceEEEecCCCceEEEecCCCcEEEEEecCccChhheeeeeccCccceeeecCCCceEEEecccceEEEEeecccccc
Confidence 4689999999 78999999999999998753 3456666667789999999999988899999999999999987653
Q ss_pred CccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe-CC-EEEEEeCCCcEE
Q 008820 328 HEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC-NG-VLYSGSRDGTIR 405 (552)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~-~~-~l~s~~~dg~i~ 405 (552)
.+.- ...+.. .....-..+++++++|+..+..|.|.+....+++.+..++ -.+.|..++|+ ++ .|++++.+|.|.
T Consensus 293 ~k~~-~~~g~e-~~~~e~FeVShd~~fia~~G~~G~I~lLhakT~eli~s~K-ieG~v~~~~fsSdsk~l~~~~~~GeV~ 369 (514)
T KOG2055|consen 293 TKLK-PPYGVE-EKSMERFEVSHDSNFIAIAGNNGHIHLLHAKTKELITSFK-IEGVVSDFTFSSDSKELLASGGTGEVY 369 (514)
T ss_pred cccc-CCCCcc-cchhheeEecCCCCeEEEcccCceEEeehhhhhhhhheee-eccEEeeEEEecCCcEEEEEcCCceEE
Confidence 3322 222221 1222345778999999999999999999999999998887 56789999999 44 888888999999
Q ss_pred EEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEECCCcEEEEeCC--------cceeeeecccceEEEEEe--cCC
Q 008820 406 LWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRND--------KFMKSMQTHKGSVFAVFL--EGK 475 (552)
Q Consensus 406 iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~--------~~~~~~~~h~~~v~~v~~--~~~ 475 (552)
+||+++..+++.+..... .....++.++++.++|+|+..|.|.|||.. +++..+..-...|+++.| |.+
T Consensus 370 v~nl~~~~~~~rf~D~G~-v~gts~~~S~ng~ylA~GS~~GiVNIYd~~s~~~s~~PkPik~~dNLtt~Itsl~Fn~d~q 448 (514)
T KOG2055|consen 370 VWNLRQNSCLHRFVDDGS-VHGTSLCISLNGSYLATGSDSGIVNIYDGNSCFASTNPKPIKTVDNLTTAITSLQFNHDAQ 448 (514)
T ss_pred EEecCCcceEEEEeecCc-cceeeeeecCCCceEEeccCcceEEEeccchhhccCCCCchhhhhhhheeeeeeeeCcchh
Confidence 999999999999987643 334447889999999999999999999843 466667777788888888 788
Q ss_pred EEEEEe--CCCeEEEEecCCCeeeeeeccCCCcccCcceEEEEEeC--CeEEEEeCCCeEEEEEec
Q 008820 476 WLFTGG--WDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQ--GKLFVGCADRTVKIALCN 537 (552)
Q Consensus 476 ~l~sgs--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~~--~~l~s~s~Dg~v~iw~~~ 537 (552)
.|+.+| .+..+++-.+.+-..-..+.... ..-+.|+|++|+| +.++.|..+|.|.+|.+.
T Consensus 449 iLAiaS~~~knalrLVHvPS~TVFsNfP~~n--~~vg~vtc~aFSP~sG~lAvGNe~grv~l~kL~ 512 (514)
T KOG2055|consen 449 ILAIASRVKKNALRLVHVPSCTVFSNFPTSN--TKVGHVTCMAFSPNSGYLAVGNEAGRVHLFKLH 512 (514)
T ss_pred hhhhhhhccccceEEEeccceeeeccCCCCC--CcccceEEEEecCCCceEEeecCCCceeeEeec
Confidence 887766 46788888877644333222221 1245699999997 569999999999999985
No 102
>KOG0640 consensus mRNA cleavage stimulating factor complex; subunit 1 [RNA processing and modification]
Probab=99.92 E-value=7.2e-23 Score=180.60 Aligned_cols=268 Identities=18% Similarity=0.226 Sum_probs=203.1
Q ss_pred ccccceeeecCcceEEEeeCCCeEEEEE---------------------------eecCccceEEEEEc--CCEEEEEeC
Q 008820 220 ADIDQARAAGGVKDLVNGLSKGNVKFKD---------------------------LQGHRDCVTGLAVG--GGFLFSSSF 270 (552)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------l~~H~~~V~~l~~s--~~~l~s~s~ 270 (552)
.+...+++++++..+++++.+..+++.+ |-.|.+.|+++.|+ ...|++|+.
T Consensus 113 ~~cR~aafs~DG~lvATGsaD~SIKildvermlaks~~~em~~~~~qa~hPvIRTlYDH~devn~l~FHPre~ILiS~sr 192 (430)
T KOG0640|consen 113 SPCRAAAFSPDGSLVATGSADASIKILDVERMLAKSKPKEMISGDTQARHPVIRTLYDHVDEVNDLDFHPRETILISGSR 192 (430)
T ss_pred cceeeeeeCCCCcEEEccCCcceEEEeehhhhhhhcchhhhccCCcccCCceEeehhhccCcccceeecchhheEEeccC
Confidence 4466778888888888888777666544 55699999999999 899999999
Q ss_pred CCcEEEEeCCCCeEEEEEe--CCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCccccccccCCCceeeeEE--
Q 008820 271 DKSIHVWSLKDFSHVHTFK--GHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIH-- 346 (552)
Q Consensus 271 dg~I~iwd~~~~~~~~~~~--~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~-- 346 (552)
|++|+++|+......+.++ ....+|.++.|+|.|+ +++.|..-.++++||+++.++-.....-.. +...+.
T Consensus 193 D~tvKlFDfsK~saKrA~K~~qd~~~vrsiSfHPsGe-fllvgTdHp~~rlYdv~T~QcfvsanPd~q----ht~ai~~V 267 (430)
T KOG0640|consen 193 DNTVKLFDFSKTSAKRAFKVFQDTEPVRSISFHPSGE-FLLVGTDHPTLRLYDVNTYQCFVSANPDDQ----HTGAITQV 267 (430)
T ss_pred CCeEEEEecccHHHHHHHHHhhccceeeeEeecCCCc-eEEEecCCCceeEEeccceeEeeecCcccc----cccceeEE
Confidence 9999999987543333222 2456899999999776 678888999999999997654333322111 223333
Q ss_pred EEeeCCCEEEEeeCCCcEEEEECCCCceeEEec-CCC-CCeEEEEEe-CC-EEEEEeCCCcEEEEECCCCceeEEEecCC
Q 008820 347 ALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMS-GHK-SAVSTLAVC-NG-VLYSGSRDGTIRLWSLSDHSLLTVLEEDS 422 (552)
Q Consensus 347 ~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~-~h~-~~v~~l~~~-~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~ 422 (552)
..++.++..++|+.||.|++||--+++++.++. .|. ..|.+..|. ++ ++++.+.|..+++|.+.+++++..+.+..
T Consensus 268 ~Ys~t~~lYvTaSkDG~IklwDGVS~rCv~t~~~AH~gsevcSa~Ftkn~kyiLsSG~DS~vkLWEi~t~R~l~~YtGAg 347 (430)
T KOG0640|consen 268 RYSSTGSLYVTASKDGAIKLWDGVSNRCVRTIGNAHGGSEVCSAVFTKNGKYILSSGKDSTVKLWEISTGRMLKEYTGAG 347 (430)
T ss_pred EecCCccEEEEeccCCcEEeeccccHHHHHHHHhhcCCceeeeEEEccCCeEEeecCCcceeeeeeecCCceEEEEecCC
Confidence 456678899999999999999999999999884 455 468888888 44 99999999999999999999999987652
Q ss_pred ---CCceEEEEEEcCCCCEEEEEEC-CCcEEEEeCCcce---eeeecccceEEEEE--ecCCEEEEEeCCCeEEEEecC
Q 008820 423 ---SGAVSSVLSLTAVQHTLVVSHE-SGSIKVWRNDKFM---KSMQTHKGSVFAVF--LEGKWLFTGGWDKTVSVQELA 492 (552)
Q Consensus 423 ---~~~~~~~~~~s~~~~~l~~g~~-dg~i~iwd~~~~~---~~~~~h~~~v~~v~--~~~~~l~sgs~dg~i~iwd~~ 492 (552)
.....+-..|+....+++.-.+ .+.+.-||.++.. ..-.+|.+.+..+. |.+..+.++|.|-.+++|--+
T Consensus 348 ~tgrq~~rtqAvFNhtEdyVl~pDEas~slcsWdaRtadr~~l~slgHn~a~R~i~HSP~~p~FmTcsdD~raRFWyrr 426 (430)
T KOG0640|consen 348 TTGRQKHRTQAVFNHTEDYVLFPDEASNSLCSWDARTADRVALLSLGHNGAVRWIVHSPVEPAFMTCSDDFRARFWYRR 426 (430)
T ss_pred cccchhhhhhhhhcCccceEEccccccCceeeccccchhhhhhcccCCCCCceEEEeCCCCCceeeecccceeeeeeec
Confidence 1111222456777777776544 5678999977532 22357999998885 588899999999999999643
No 103
>KOG0647 consensus mRNA export protein (contains WD40 repeats) [RNA processing and modification]
Probab=99.91 E-value=5.8e-22 Score=174.51 Aligned_cols=257 Identities=18% Similarity=0.222 Sum_probs=196.1
Q ss_pred CCCCCccccceeeecCc-ceEEEeeCCCeEEEEEeec-----------CccceEEEEEc--CCEEEEEeCCCcEEEEeCC
Q 008820 215 ENSDGADIDQARAAGGV-KDLVNGLSKGNVKFKDLQG-----------HRDCVTGLAVG--GGFLFSSSFDKSIHVWSLK 280 (552)
Q Consensus 215 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~-----------H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~ 280 (552)
..++.+.|..+.|++.. ..++.++.++++++|+++. |.++|.+++|+ |..+++|+.|+.+++||+.
T Consensus 23 ~~pP~DsIS~l~FSP~~~~~~~A~SWD~tVR~wevq~~g~~~~ka~~~~~~PvL~v~WsddgskVf~g~~Dk~~k~wDL~ 102 (347)
T KOG0647|consen 23 PNPPEDSISALAFSPQADNLLAAGSWDGTVRIWEVQNSGQLVPKAQQSHDGPVLDVCWSDDGSKVFSGGCDKQAKLWDLA 102 (347)
T ss_pred CCCcccchheeEeccccCceEEecccCCceEEEEEecCCcccchhhhccCCCeEEEEEccCCceEEeeccCCceEEEEcc
Confidence 34566678899999944 4455889999999999754 89999999999 9999999999999999999
Q ss_pred CCeEEEEEeCCCCCeEEEEEecCCC-CEEEEEcCCCcEEEEeCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEee
Q 008820 281 DFSHVHTFKGHDHKVMAVVYVDEDQ-PLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGS 359 (552)
Q Consensus 281 ~~~~~~~~~~h~~~v~~v~~~~~~~-~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs 359 (552)
+++ ...+..|.++|.++.|.+... ..|++||.|++|+.||.+.......+.... .+.+...-...++++.
T Consensus 103 S~Q-~~~v~~Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R~~~pv~t~~LPe--------RvYa~Dv~~pm~vVat 173 (347)
T KOG0647|consen 103 SGQ-VSQVAAHDAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDTRSSNPVATLQLPE--------RVYAADVLYPMAVVAT 173 (347)
T ss_pred CCC-eeeeeecccceeEEEEecCCCcceeEecccccceeecccCCCCeeeeeeccc--------eeeehhccCceeEEEe
Confidence 984 556778999999999987443 478999999999999999654443333211 2344555556889999
Q ss_pred CCCcEEEEECCCCceeEEe--cCCCCCeEEEEEe-C-CEEEEEeCCCcEEEEECCCC--ceeEEEecCCC-----CceEE
Q 008820 360 GDRTIKAWSLLDGTLSCTM--SGHKSAVSTLAVC-N-GVLYSGSRDGTIRLWSLSDH--SLLTVLEEDSS-----GAVSS 428 (552)
Q Consensus 360 ~dg~i~iwd~~~~~~~~~~--~~h~~~v~~l~~~-~-~~l~s~~~dg~i~iwd~~~~--~~~~~~~~~~~-----~~~~~ 428 (552)
.+..|.+|+++++...... ..-.-.+.|++.. + +..+.|+-.|.+.+..+..+ +.-.+|+-|.. +.+..
T Consensus 174 a~r~i~vynL~n~~te~k~~~SpLk~Q~R~va~f~d~~~~alGsiEGrv~iq~id~~~~~~nFtFkCHR~~~~~~~~VYa 253 (347)
T KOG0647|consen 174 AERHIAVYNLENPPTEFKRIESPLKWQTRCVACFQDKDGFALGSIEGRVAIQYIDDPNPKDNFTFKCHRSTNSVNDDVYA 253 (347)
T ss_pred cCCcEEEEEcCCCcchhhhhcCcccceeeEEEEEecCCceEeeeecceEEEEecCCCCccCceeEEEeccCCCCCCceEE
Confidence 9999999999876443221 1123457888877 3 36699999999999999876 33444554432 11222
Q ss_pred --EEEEcCCCCEEEEEECCCcEEEEe--CCcceeeeecccceEEEEEe--cCCEEEEE
Q 008820 429 --VLSLTAVQHTLVVSHESGSIKVWR--NDKFMKSMQTHKGSVFAVFL--EGKWLFTG 480 (552)
Q Consensus 429 --~~~~s~~~~~l~~g~~dg~i~iwd--~~~~~~~~~~h~~~v~~v~~--~~~~l~sg 480 (552)
.++|+|....|++.+.||+..+|| .+..++..+.|..+|++.+| +|.+++-+
T Consensus 254 VNsi~FhP~hgtlvTaGsDGtf~FWDkdar~kLk~s~~~~qpItcc~fn~~G~ifaYA 311 (347)
T KOG0647|consen 254 VNSIAFHPVHGTLVTAGSDGTFSFWDKDARTKLKTSETHPQPITCCSFNRNGSIFAYA 311 (347)
T ss_pred ecceEeecccceEEEecCCceEEEecchhhhhhhccCcCCCccceeEecCCCCEEEEE
Confidence 268999999999999999999998 45677788889999999998 67766644
No 104
>KOG0310 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.91 E-value=1.8e-22 Score=188.77 Aligned_cols=237 Identities=16% Similarity=0.274 Sum_probs=186.2
Q ss_pred eecCccceEEEEEc--CCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCC
Q 008820 248 LQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFP 325 (552)
Q Consensus 248 l~~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~ 325 (552)
+.-.++.|.++.|- |++++.|...|.|+|+|.++...++.+.+|+.+|..+.|+|.++.++++|+.|+.+++||+.+.
T Consensus 64 ~srFk~~v~s~~fR~DG~LlaaGD~sG~V~vfD~k~r~iLR~~~ah~apv~~~~f~~~d~t~l~s~sDd~v~k~~d~s~a 143 (487)
T KOG0310|consen 64 FSRFKDVVYSVDFRSDGRLLAAGDESGHVKVFDMKSRVILRQLYAHQAPVHVTKFSPQDNTMLVSGSDDKVVKYWDLSTA 143 (487)
T ss_pred HHhhccceeEEEeecCCeEEEccCCcCcEEEeccccHHHHHHHhhccCceeEEEecccCCeEEEecCCCceEEEEEcCCc
Confidence 44567889999998 9999999999999999988777788899999999999999999999999999999999999976
Q ss_pred CCCccccccccCCCceeeeEEEEeeC-CCEEEEeeCCCcEEEEECCCC-ceeEEecCCCCCeEEEEEe-C-CEEEEEeCC
Q 008820 326 LGHEPLKKWNEEKDWRYSGIHALTTS-GRYLYTGSGDRTIKAWSLLDG-TLSCTMSGHKSAVSTLAVC-N-GVLYSGSRD 401 (552)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~sgs~dg~i~iwd~~~~-~~~~~~~~h~~~v~~l~~~-~-~~l~s~~~d 401 (552)
.. .....++.+. ..+.+++|. +..++||+.||.|++||.+.. ..+.++. |..+|..+.+- + +.+++++ .
T Consensus 144 ~v---~~~l~~htDY--VR~g~~~~~~~hivvtGsYDg~vrl~DtR~~~~~v~eln-hg~pVe~vl~lpsgs~iasAg-G 216 (487)
T KOG0310|consen 144 YV---QAELSGHTDY--VRCGDISPANDHIVVTGSYDGKVRLWDTRSLTSRVVELN-HGCPVESVLALPSGSLIASAG-G 216 (487)
T ss_pred EE---EEEecCCcce--eEeeccccCCCeEEEecCCCceEEEEEeccCCceeEEec-CCCceeeEEEcCCCCEEEEcC-C
Confidence 52 3344444432 223345554 458999999999999999977 5666665 99999999998 4 3666554 5
Q ss_pred CcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEECCCcEEEEeCCc--ceeeeecccceEEEEE--ecCCEE
Q 008820 402 GTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDK--FMKSMQTHKGSVFAVF--LEGKWL 477 (552)
Q Consensus 402 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~~--~~~~~~~h~~~v~~v~--~~~~~l 477 (552)
..+++||+-+|..+......|...+++ +.+..++..|++|+-|+.|++||+.+ .+..+. ..++|.+++ ++++.+
T Consensus 217 n~vkVWDl~~G~qll~~~~~H~KtVTc-L~l~s~~~rLlS~sLD~~VKVfd~t~~Kvv~s~~-~~~pvLsiavs~dd~t~ 294 (487)
T KOG0310|consen 217 NSVKVWDLTTGGQLLTSMFNHNKTVTC-LRLASDSTRLLSGSLDRHVKVFDTTNYKVVHSWK-YPGPVLSIAVSPDDQTV 294 (487)
T ss_pred CeEEEEEecCCceehhhhhcccceEEE-EEeecCCceEeecccccceEEEEccceEEEEeee-cccceeeEEecCCCceE
Confidence 689999999766554444433444555 78888999999999999999999654 334443 467887766 488999
Q ss_pred EEEeCCCeEEEEecCC
Q 008820 478 FTGGWDKTVSVQELAG 493 (552)
Q Consensus 478 ~sgs~dg~i~iwd~~~ 493 (552)
+.|-.||.+.+=+...
T Consensus 295 viGmsnGlv~~rr~~~ 310 (487)
T KOG0310|consen 295 VIGMSNGLVSIRRREV 310 (487)
T ss_pred EEecccceeeeehhhc
Confidence 9999999987765443
No 105
>KOG0646 consensus WD40 repeat protein [General function prediction only]
Probab=99.91 E-value=4.6e-23 Score=191.60 Aligned_cols=242 Identities=20% Similarity=0.341 Sum_probs=195.9
Q ss_pred ccceEEEEEc--CCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCc
Q 008820 252 RDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHE 329 (552)
Q Consensus 252 ~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~ 329 (552)
.++|.+++-+ |.+|+.|+..|.|++|.+.+|+.+..+.+|-..|+++.|+.++. ++++|+.||.|.+|++.
T Consensus 81 Pg~v~al~s~n~G~~l~ag~i~g~lYlWelssG~LL~v~~aHYQ~ITcL~fs~dgs-~iiTgskDg~V~vW~l~------ 153 (476)
T KOG0646|consen 81 PGPVHALASSNLGYFLLAGTISGNLYLWELSSGILLNVLSAHYQSITCLKFSDDGS-HIITGSKDGAVLVWLLT------ 153 (476)
T ss_pred ccceeeeecCCCceEEEeecccCcEEEEEeccccHHHHHHhhccceeEEEEeCCCc-EEEecCCCccEEEEEEE------
Confidence 4679999887 88888888999999999999999999999999999999988655 78999999999999864
Q ss_pred cccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe-C---CEEEEEeCCCcEE
Q 008820 330 PLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC-N---GVLYSGSRDGTIR 405 (552)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~-~---~~l~s~~~dg~i~ 405 (552)
.++++..|+ +-++.+.+..|.-+|+++... + .+++++|.|.+++
T Consensus 154 ------------------------~lv~a~~~~--------~~~p~~~f~~HtlsITDl~ig~Gg~~~rl~TaS~D~t~k 201 (476)
T KOG0646|consen 154 ------------------------DLVSADNDH--------SVKPLHIFSDHTLSITDLQIGSGGTNARLYTASEDRTIK 201 (476)
T ss_pred ------------------------eecccccCC--------CccceeeeccCcceeEEEEecCCCccceEEEecCCceEE
Confidence 244455554 456788888999999999988 3 3999999999999
Q ss_pred EEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEECCCcEEEEeCC------------------cceeeeecccc--
Q 008820 406 LWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRND------------------KFMKSMQTHKG-- 465 (552)
Q Consensus 406 iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~------------------~~~~~~~~h~~-- 465 (552)
+||+..+..+.++..+ ..+.+ ++++|.++.+++|+.+|.|.+.++. .....+.+|.+
T Consensus 202 ~wdlS~g~LLlti~fp--~si~a-v~lDpae~~~yiGt~~G~I~~~~~~~~~~~~~~v~~k~~~~~~t~~~~~~Gh~~~~ 278 (476)
T KOG0646|consen 202 LWDLSLGVLLLTITFP--SSIKA-VALDPAERVVYIGTEEGKIFQNLLFKLSGQSAGVNQKGRHEENTQINVLVGHENES 278 (476)
T ss_pred EEEeccceeeEEEecC--Cccee-EEEcccccEEEecCCcceEEeeehhcCCcccccccccccccccceeeeeccccCCc
Confidence 9999999998888764 23444 6999999999999999999988632 13456788988
Q ss_pred eEEEEEe--cCCEEEEEeCCCeEEEEecCCCeeeeeeccCCCcccCcceEEEEEe---CCeEEEEeCCCeEEEEEecCCc
Q 008820 466 SVFAVFL--EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYW---QGKLFVGCADRTVKIALCNRQI 540 (552)
Q Consensus 466 ~v~~v~~--~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~---~~~l~s~s~Dg~v~iw~~~~~~ 540 (552)
.|+|++. ||..|++|+.||.|+|||+.+.++....... .++|+.+.+. ++.+..-.....+-.|++.+..
T Consensus 279 ~ITcLais~DgtlLlSGd~dg~VcvWdi~S~Q~iRtl~~~-----kgpVtnL~i~~~~~~~~l~~~~~ps~~~~~lkr~i 353 (476)
T KOG0646|consen 279 AITCLAISTDGTLLLSGDEDGKVCVWDIYSKQCIRTLQTS-----KGPVTNLQINPLERGIILFEHKQPSLPNPHLKRMI 353 (476)
T ss_pred ceeEEEEecCccEEEeeCCCCCEEEEecchHHHHHHHhhh-----ccccceeEeeccccceecccccCccCCchHhhccC
Confidence 8888875 9999999999999999999998887766532 6678888874 4445544455556666665433
No 106
>KOG1408 consensus WD40 repeat protein [Function unknown]
Probab=99.91 E-value=5.7e-22 Score=192.76 Aligned_cols=300 Identities=19% Similarity=0.246 Sum_probs=219.0
Q ss_pred eeeecCcceEEEeeCCCeEEEEEe------------ecCccceEEEEEc-------------CCEEEEEeCCCcEEEEeC
Q 008820 225 ARAAGGVKDLVNGLSKGNVKFKDL------------QGHRDCVTGLAVG-------------GGFLFSSSFDKSIHVWSL 279 (552)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~l------------~~H~~~V~~l~~s-------------~~~l~s~s~dg~I~iwd~ 279 (552)
..|.+....+..-..+..+.+|++ --|...|+.+..- ...++|++.|++||+||+
T Consensus 330 ~~Fdet~~klscVYndhSlYvWDvrD~~kvgk~~s~lyHS~ciW~Ve~~p~nv~~~~~aclp~~cF~TCSsD~TIRlW~l 409 (1080)
T KOG1408|consen 330 CQFDETTDKLSCVYNDHSLYVWDVRDVNKVGKCSSMLYHSACIWDVENLPCNVHSPTAACLPRGCFTTCSSDGTIRLWDL 409 (1080)
T ss_pred EEecCCCceEEEEEcCceEEEEeccccccccceeeeeeccceeeeeccccccccCcccccCCccceeEecCCCcEEEeec
Confidence 344445555555666777777774 3588888887542 456999999999999998
Q ss_pred CCCeEEEEE-------------------------------------eCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeC
Q 008820 280 KDFSHVHTF-------------------------------------KGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSF 322 (552)
Q Consensus 280 ~~~~~~~~~-------------------------------------~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~ 322 (552)
+.+..-.++ -+....+.+++.+|+++ .|++|..-|++++|++
T Consensus 410 ~~ctnn~vyrRNils~~l~ki~y~d~~~q~~~d~~~~~fdka~~s~~d~r~G~R~~~vSp~gq-hLAsGDr~GnlrVy~L 488 (1080)
T KOG1408|consen 410 AFCTNNQVYRRNILSANLSKIPYEDSTQQIMHDASAGIFDKALVSTCDSRFGFRALAVSPDGQ-HLASGDRGGNLRVYDL 488 (1080)
T ss_pred ccccccceeecccchhhhhcCccccCchhhhhhccCCcccccchhhcCcccceEEEEECCCcc-eecccCccCceEEEEe
Confidence 753111110 11234689999999776 6799999999999999
Q ss_pred CCCCCCccccccccCCCceeeeEEEEeeC-----CCEEEEeeCCCcEEEEECC-CCceeEEecCCCCCeEEEEEe-CC--
Q 008820 323 SFPLGHEPLKKWNEEKDWRYSGIHALTTS-----GRYLYTGSGDRTIKAWSLL-DGTLSCTMSGHKSAVSTLAVC-NG-- 393 (552)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~l~sgs~dg~i~iwd~~-~~~~~~~~~~h~~~v~~l~~~-~~-- 393 (552)
........+. . +...+.++... .++|++++.|..|++||+. +..+++++.+|...|+++.|. .+
T Consensus 489 q~l~~~~~~e---A----HesEilcLeyS~p~~~~kLLASasrdRlIHV~Dv~rny~l~qtld~HSssITsvKFa~~gln 561 (1080)
T KOG1408|consen 489 QELEYTCFME---A----HESEILCLEYSFPVLTNKLLASASRDRLIHVYDVKRNYDLVQTLDGHSSSITSVKFACNGLN 561 (1080)
T ss_pred hhhhhhhhee---c----ccceeEEEeecCchhhhHhhhhccCCceEEEEecccccchhhhhcccccceeEEEEeecCCc
Confidence 8543322222 2 22234454433 3489999999999999986 456788999999999999998 22
Q ss_pred -EEEEEeCCCcEEEEECCCCceeEEEecCC----CCceEEEEEEcCCCCEEEEEECCCcEEEEeCC--cceeeeec---c
Q 008820 394 -VLYSGSRDGTIRLWSLSDHSLLTVLEEDS----SGAVSSVLSLTAVQHTLVVSHESGSIKVWRND--KFMKSMQT---H 463 (552)
Q Consensus 394 -~l~s~~~dg~i~iwd~~~~~~~~~~~~~~----~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~--~~~~~~~~---h 463 (552)
.+++++.|..|.+--.+.......+..++ +..... +.+.|..+++++++.|..|+|||+. +..+.+++ |
T Consensus 562 ~~MiscGADksimFr~~qk~~~g~~f~r~t~t~~ktTlYD-m~Vdp~~k~v~t~cQDrnirif~i~sgKq~k~FKgs~~~ 640 (1080)
T KOG1408|consen 562 RKMISCGADKSIMFRVNQKASSGRLFPRHTQTLSKTTLYD-MAVDPTSKLVVTVCQDRNIRIFDIESGKQVKSFKGSRDH 640 (1080)
T ss_pred eEEEeccCchhhheehhccccCceeccccccccccceEEE-eeeCCCcceEEEEecccceEEEeccccceeeeecccccC
Confidence 88999999988654433221122222111 122333 6889999999999999999999964 56667765 6
Q ss_pred cceEEEEE--ecCCEEEEEeCCCeEEEEecCCCeeeeeeccCCCcccCcceEEEEEeCCe--EEEEeCCCeEEEEEecC
Q 008820 464 KGSVFAVF--LEGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQGK--LFVGCADRTVKIALCNR 538 (552)
Q Consensus 464 ~~~v~~v~--~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~--l~s~s~Dg~v~iw~~~~ 538 (552)
.+....+. |.|.||++...|.++.++|+.++++......+ ...|+.+.|.++. |++.+.||.|.||.+..
T Consensus 641 eG~lIKv~lDPSgiY~atScsdktl~~~Df~sgEcvA~m~GH-----sE~VTG~kF~nDCkHlISvsgDgCIFvW~lp~ 714 (1080)
T KOG1408|consen 641 EGDLIKVILDPSGIYLATSCSDKTLCFVDFVSGECVAQMTGH-----SEAVTGVKFLNDCKHLISVSGDGCIFVWKLPL 714 (1080)
T ss_pred CCceEEEEECCCccEEEEeecCCceEEEEeccchhhhhhcCc-----chheeeeeecccchhheeecCCceEEEEECch
Confidence 56665554 68999999999999999999999988776654 6679999999864 99999999999999873
No 107
>KOG0299 consensus U3 snoRNP-associated protein (contains WD40 repeats) [RNA processing and modification]
Probab=99.91 E-value=2.9e-22 Score=185.96 Aligned_cols=231 Identities=23% Similarity=0.395 Sum_probs=180.1
Q ss_pred cCccceEEEEEc--CCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCC
Q 008820 250 GHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLG 327 (552)
Q Consensus 250 ~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~ 327 (552)
+|...|.+++.+ +++|++|+.|..|.||+.++.+.++.+++|.+.|.+++|-. +..-+++++.|++|++|+++...
T Consensus 200 ~h~keil~~avS~Dgkylatgg~d~~v~Iw~~~t~ehv~~~~ghr~~V~~L~fr~-gt~~lys~s~Drsvkvw~~~~~s- 277 (479)
T KOG0299|consen 200 GHVKEILTLAVSSDGKYLATGGRDRHVQIWDCDTLEHVKVFKGHRGAVSSLAFRK-GTSELYSASADRSVKVWSIDQLS- 277 (479)
T ss_pred cccceeEEEEEcCCCcEEEecCCCceEEEecCcccchhhcccccccceeeeeeec-CccceeeeecCCceEEEehhHhH-
Confidence 789999999999 99999999999999999999999999999999999999965 66678999999999999998543
Q ss_pred CccccccccCCCceeeeEEEEeeC--CCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe-CCEEEEEeCCCcE
Q 008820 328 HEPLKKWNEEKDWRYSGIHALTTS--GRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC-NGVLYSGSRDGTI 404 (552)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~-~~~l~s~~~dg~i 404 (552)
.+.++.+|+. .+..++.- ++.+-+|+.|+++++|++ ..+....+.+|.+.+-|++|- +..+++|+.||.|
T Consensus 278 --~vetlyGHqd----~v~~IdaL~reR~vtVGgrDrT~rlwKi-~eesqlifrg~~~sidcv~~In~~HfvsGSdnG~I 350 (479)
T KOG0299|consen 278 --YVETLYGHQD----GVLGIDALSRERCVTVGGRDRTVRLWKI-PEESQLIFRGGEGSIDCVAFINDEHFVSGSDNGSI 350 (479)
T ss_pred --HHHHHhCCcc----ceeeechhcccceEEeccccceeEEEec-cccceeeeeCCCCCeeeEEEecccceeeccCCceE
Confidence 3344444433 34444432 345666779999999999 344455778899999999998 6699999999999
Q ss_pred EEEECCCCceeEEEecCCC---C-------ceEEEEEEcCCCCEEEEEECCCcEEEEeCCcc------eeeeecccceEE
Q 008820 405 RLWSLSDHSLLTVLEEDSS---G-------AVSSVLSLTAVQHTLVVSHESGSIKVWRNDKF------MKSMQTHKGSVF 468 (552)
Q Consensus 405 ~iwd~~~~~~~~~~~~~~~---~-------~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~~~------~~~~~~h~~~v~ 468 (552)
.+|++.+.+++.+....|. . .....++..|..+++++|+.+|.|++|.+... +..+. -.+.|+
T Consensus 351 aLWs~~KKkplf~~~~AHgv~~~~~~~~~~~Witsla~i~~sdL~asGS~~G~vrLW~i~~g~r~i~~l~~ls-~~GfVN 429 (479)
T KOG0299|consen 351 ALWSLLKKKPLFTSRLAHGVIPELDPVNGNFWITSLAVIPGSDLLASGSWSGCVRLWKIEDGLRAINLLYSLS-LVGFVN 429 (479)
T ss_pred EEeeecccCceeEeeccccccCCccccccccceeeeEecccCceEEecCCCCceEEEEecCCccccceeeecc-cccEEE
Confidence 9999999999888765442 1 02234678899999999999999999986543 22333 567888
Q ss_pred EEEe--cCCEEEEE-eCCCeEEEEe
Q 008820 469 AVFL--EGKWLFTG-GWDKTVSVQE 490 (552)
Q Consensus 469 ~v~~--~~~~l~sg-s~dg~i~iwd 490 (552)
++.| +|+.+++| +....+--|-
T Consensus 430 sl~f~~sgk~ivagiGkEhRlGRW~ 454 (479)
T KOG0299|consen 430 SLAFSNSGKRIVAGIGKEHRLGRWW 454 (479)
T ss_pred EEEEccCCCEEEEecccccccceee
Confidence 8887 88866655 4444444443
No 108
>KOG0300 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.91 E-value=1.9e-22 Score=178.48 Aligned_cols=264 Identities=18% Similarity=0.279 Sum_probs=203.4
Q ss_pred ccceeeecCcceEEEeeCCCeEEEE---------EeecCccceEEEEEc--CCEEEEEeCCCcEEEEeC------CC---
Q 008820 222 IDQARAAGGVKDLVNGLSKGNVKFK---------DLQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSL------KD--- 281 (552)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~---------~l~~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~------~~--- 281 (552)
+..++.......+-+.+.+.+.++| ++.||.+.|+++.|+ +.++++++.|++-.||.. ..
T Consensus 151 iW~Vaa~~tqpi~gtASADhTA~iWs~Esg~CL~~Y~GH~GSVNsikfh~s~~L~lTaSGD~taHIW~~av~~~vP~~~a 230 (481)
T KOG0300|consen 151 IWHVAADSTQPICGTASADHTARIWSLESGACLATYTGHTGSVNSIKFHNSGLLLLTASGDETAHIWKAAVNWEVPSNNA 230 (481)
T ss_pred eeeehhhcCCcceeecccccceeEEeeccccceeeecccccceeeEEeccccceEEEccCCcchHHHHHhhcCcCCCCCC
Confidence 4444444444444455555555555 468999999999999 899999999999999962 10
Q ss_pred -------------------------------CeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCcc
Q 008820 282 -------------------------------FSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEP 330 (552)
Q Consensus 282 -------------------------------~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~ 330 (552)
..++..+.+|.+.|.+..|...+ ..+++++.|.+..+||++++.....
T Consensus 231 ~~~hSsEeE~e~sDe~~~d~d~~~~sD~~tiRvPl~~ltgH~~vV~a~dWL~gg-~Q~vTaSWDRTAnlwDVEtge~v~~ 309 (481)
T KOG0300|consen 231 PSDHSSEEEEEHSDEHNRDTDSSEKSDGHTIRVPLMRLTGHRAVVSACDWLAGG-QQMVTASWDRTANLWDVETGEVVNI 309 (481)
T ss_pred CCCCCchhhhhcccccccccccccccCCceeeeeeeeeeccccceEehhhhcCc-ceeeeeeccccceeeeeccCceecc
Confidence 02356678999999999998744 4679999999999999998876665
Q ss_pred ccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCC-ceeEEecCCCCCeEEEEEe-CCEEEEEeCCCcEEEEE
Q 008820 331 LKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDG-TLSCTMSGHKSAVSTLAVC-NGVLYSGSRDGTIRLWS 408 (552)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~-~~~~~~~~h~~~v~~l~~~-~~~l~s~~~dg~i~iwd 408 (552)
+......- .-++-+|..+++++.+.|.+.++||++.. ..+..|.+|...|+++.|. +..+++|+.|.+|++||
T Consensus 310 LtGHd~EL-----tHcstHptQrLVvTsSrDtTFRLWDFReaI~sV~VFQGHtdtVTS~vF~~dd~vVSgSDDrTvKvWd 384 (481)
T KOG0300|consen 310 LTGHDSEL-----THCSTHPTQRLVVTSSRDTTFRLWDFREAIQSVAVFQGHTDTVTSVVFNTDDRVVSGSDDRTVKVWD 384 (481)
T ss_pred ccCcchhc-----cccccCCcceEEEEeccCceeEeccchhhcceeeeecccccceeEEEEecCCceeecCCCceEEEee
Confidence 55433221 12345667779999999999999999843 4577899999999999999 88999999999999999
Q ss_pred CCCCc-eeEEEecCCCCceEEEEEEcCCCCEEEEEECCCcEEEEeCCc------ceeeeecccceEEEEEecC----CEE
Q 008820 409 LSDHS-LLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDK------FMKSMQTHKGSVFAVFLEG----KWL 477 (552)
Q Consensus 409 ~~~~~-~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~~------~~~~~~~h~~~v~~v~~~~----~~l 477 (552)
+++.+ ++.++.... .+.. ++++..+..|+.-..+..|++||+.. +...-++|..-|.|++|.. .-|
T Consensus 385 LrNMRsplATIRtdS--~~NR-vavs~g~~iIAiPhDNRqvRlfDlnG~RlaRlPrtsRqgHrRMV~c~AW~eehp~cnL 461 (481)
T KOG0300|consen 385 LRNMRSPLATIRTDS--PANR-VAVSKGHPIIAIPHDNRQVRLFDLNGNRLARLPRTSRQGHRRMVTCCAWLEEHPACNL 461 (481)
T ss_pred eccccCcceeeecCC--ccce-eEeecCCceEEeccCCceEEEEecCCCccccCCcccccccceeeeeeeccccCccccc
Confidence 99865 567776543 2333 57788788999999999999999642 3335578999999999822 357
Q ss_pred EEEeCCCeEEEEecCCC
Q 008820 478 FTGGWDKTVSVQELAGD 494 (552)
Q Consensus 478 ~sgs~dg~i~iwd~~~~ 494 (552)
++++.|..+.=|++...
T Consensus 462 ftcGFDR~v~gW~in~p 478 (481)
T KOG0300|consen 462 FTCGFDRMVAGWKINTP 478 (481)
T ss_pred ccccccceeeeeEeccc
Confidence 89999999999998754
No 109
>KOG0305 consensus Anaphase promoting complex, Cdc20, Cdh1, and Ama1 subunits [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones]
Probab=99.91 E-value=4.1e-22 Score=193.64 Aligned_cols=265 Identities=18% Similarity=0.223 Sum_probs=206.7
Q ss_pred EEEc-CCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCcccccccc
Q 008820 258 LAVG-GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNE 336 (552)
Q Consensus 258 l~~s-~~~l~s~s~dg~I~iwd~~~~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~ 336 (552)
+.|+ .+.|+.|.. ..|++|+..+++.......+...|+++.|++++. +|++|..+|.|.|||....+....+...
T Consensus 183 ldWss~n~laValg-~~vylW~~~s~~v~~l~~~~~~~vtSv~ws~~G~-~LavG~~~g~v~iwD~~~~k~~~~~~~~-- 258 (484)
T KOG0305|consen 183 LDWSSANVLAVALG-QSVYLWSASSGSVTELCSFGEELVTSVKWSPDGS-HLAVGTSDGTVQIWDVKEQKKTRTLRGS-- 258 (484)
T ss_pred hhcccCCeEEEEec-ceEEEEecCCCceEEeEecCCCceEEEEECCCCC-EEEEeecCCeEEEEehhhccccccccCC--
Confidence 4566 667777764 4799999999987776666689999999999766 7799999999999999866544444331
Q ss_pred CCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCceeEE-ecCCCCCeEEEEEe--CCEEEEEeCCCcEEEEECCCCc
Q 008820 337 EKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCT-MSGHKSAVSTLAVC--NGVLYSGSRDGTIRLWSLSDHS 413 (552)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~-~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~ 413 (552)
+...+.++++++..+.+|+.|+.|..+|++..+.... +.+|...|..++|+ +.++++|+.|+.+.|||.....
T Consensus 259 ----h~~rvg~laW~~~~lssGsr~~~I~~~dvR~~~~~~~~~~~H~qeVCgLkws~d~~~lASGgnDN~~~Iwd~~~~~ 334 (484)
T KOG0305|consen 259 ----HASRVGSLAWNSSVLSSGSRDGKILNHDVRISQHVVSTLQGHRQEVCGLKWSPDGNQLASGGNDNVVFIWDGLSPE 334 (484)
T ss_pred ----cCceeEEEeccCceEEEecCCCcEEEEEEecchhhhhhhhcccceeeeeEECCCCCeeccCCCccceEeccCCCcc
Confidence 2334667888899999999999999999998876555 88999999999999 4499999999999999998888
Q ss_pred eeEEEecCCCCceEEEEEEcCC-CCEEEEEE--CCCcEEEEeCCc--ceeeeecccceEEEEEe--cCCEEEE--EeCCC
Q 008820 414 LLTVLEEDSSGAVSSVLSLTAV-QHTLVVSH--ESGSIKVWRNDK--FMKSMQTHKGSVFAVFL--EGKWLFT--GGWDK 484 (552)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~s~~-~~~l~~g~--~dg~i~iwd~~~--~~~~~~~h~~~v~~v~~--~~~~l~s--gs~dg 484 (552)
++..+..|. ..+.. ++|+|- ..+||+|+ .|+.|++||... .+..+. -.+.|.++.| ..+-|++ |..++
T Consensus 335 p~~~~~~H~-aAVKA-~awcP~q~~lLAsGGGs~D~~i~fwn~~~g~~i~~vd-tgsQVcsL~Wsk~~kEi~sthG~s~n 411 (484)
T KOG0305|consen 335 PKFTFTEHT-AAVKA-LAWCPWQSGLLATGGGSADRCIKFWNTNTGARIDSVD-TGSQVCSLIWSKKYKELLSTHGYSEN 411 (484)
T ss_pred ccEEEeccc-eeeeE-eeeCCCccCceEEcCCCcccEEEEEEcCCCcEecccc-cCCceeeEEEcCCCCEEEEecCCCCC
Confidence 888888773 45554 677774 56788764 599999999653 333332 3567888988 3433444 34577
Q ss_pred eEEEEecCCCeeeeeeccCCCcccCcceEEEEEeCC--eEEEEeCCCeEEEEEecC
Q 008820 485 TVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQG--KLFVGCADRTVKIALCNR 538 (552)
Q Consensus 485 ~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~--~l~s~s~Dg~v~iw~~~~ 538 (552)
.|.||+..+.+....+..+ ...|..++++|+ .+++|+.|.++++|++-.
T Consensus 412 ~i~lw~~ps~~~~~~l~gH-----~~RVl~la~SPdg~~i~t~a~DETlrfw~~f~ 462 (484)
T KOG0305|consen 412 QITLWKYPSMKLVAELLGH-----TSRVLYLALSPDGETIVTGAADETLRFWNLFD 462 (484)
T ss_pred cEEEEeccccceeeeecCC-----cceeEEEEECCCCCEEEEecccCcEEeccccC
Confidence 8999999886555554443 777999999975 499999999999999864
No 110
>KOG0641 consensus WD40 repeat protein [General function prediction only]
Probab=99.91 E-value=7.6e-21 Score=160.58 Aligned_cols=264 Identities=19% Similarity=0.240 Sum_probs=203.4
Q ss_pred cccceeeecCcceEEEeeCCCeEEEEE------------------------eecCccceEEEEEc--CCEEEEEeCCCcE
Q 008820 221 DIDQARAAGGVKDLVNGLSKGNVKFKD------------------------LQGHRDCVTGLAVG--GGFLFSSSFDKSI 274 (552)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------l~~H~~~V~~l~~s--~~~l~s~s~dg~I 274 (552)
.+.++.|.+.+..++.++...+.++-. -+.|.+.|.|.+|+ |+++++|+.|.+|
T Consensus 34 airav~fhp~g~lyavgsnskt~ric~yp~l~~~r~~hea~~~pp~v~~kr~khhkgsiyc~~ws~~geliatgsndk~i 113 (350)
T KOG0641|consen 34 AIRAVAFHPAGGLYAVGSNSKTFRICAYPALIDLRHAHEAAKQPPSVLCKRNKHHKGSIYCTAWSPCGELIATGSNDKTI 113 (350)
T ss_pred heeeEEecCCCceEEeccCCceEEEEccccccCcccccccccCCCeEEeeeccccCccEEEEEecCccCeEEecCCCceE
Confidence 466777888887777777666555432 34689999999999 9999999999999
Q ss_pred EEEeCCCCeE-----EEEEeCCCCCeEEEEEecC---CCCEEEEEc-CCCcEEEEeCCCCCCCccccccccCCCceeeeE
Q 008820 275 HVWSLKDFSH-----VHTFKGHDHKVMAVVYVDE---DQPLCISGD-SGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGI 345 (552)
Q Consensus 275 ~iwd~~~~~~-----~~~~~~h~~~v~~v~~~~~---~~~~l~s~~-~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~ 345 (552)
++.-.+...+ -..+.-|.+.|..++|..+ +..+|++++ .|..|++-|...++....+ .++.. +. +
T Consensus 114 k~l~fn~dt~~~~g~dle~nmhdgtirdl~fld~~~s~~~il~s~gagdc~iy~tdc~~g~~~~a~---sghtg-hi--l 187 (350)
T KOG0641|consen 114 KVLPFNADTCNATGHDLEFNMHDGTIRDLAFLDDPESGGAILASAGAGDCKIYITDCGRGQGFHAL---SGHTG-HI--L 187 (350)
T ss_pred EEEecccccccccCcceeeeecCCceeeeEEecCCCcCceEEEecCCCcceEEEeecCCCCcceee---cCCcc-cE--E
Confidence 9987654332 2346679999999999753 445666655 4677777787766544333 33333 22 2
Q ss_pred EEEeeCCCEEEEeeCCCcEEEEECCCCceeEEecC--C-----CCCeEEEEEe--CCEEEEEeCCCcEEEEECCCCceeE
Q 008820 346 HALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSG--H-----KSAVSTLAVC--NGVLYSGSRDGTIRLWSLSDHSLLT 416 (552)
Q Consensus 346 ~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~--h-----~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~ 416 (552)
.-.++++-.+++|+.|.+|++||++-..++.++.. | .+.|.++++. +.+|++|-.|....+||++.++.++
T Consensus 188 alyswn~~m~~sgsqdktirfwdlrv~~~v~~l~~~~~~~glessavaav~vdpsgrll~sg~~dssc~lydirg~r~iq 267 (350)
T KOG0641|consen 188 ALYSWNGAMFASGSQDKTIRFWDLRVNSCVNTLDNDFHDGGLESSAVAAVAVDPSGRLLASGHADSSCMLYDIRGGRMIQ 267 (350)
T ss_pred EEEEecCcEEEccCCCceEEEEeeeccceeeeccCcccCCCcccceeEEEEECCCcceeeeccCCCceEEEEeeCCceee
Confidence 34678899999999999999999998888887632 2 3568888887 4499999999999999999999999
Q ss_pred EEecCCCCceEEEEEEcCCCCEEEEEECCCcEEEEeCCc------ceeeeecccceEEEEEe--cCCEEEEEeCCCeEEE
Q 008820 417 VLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDK------FMKSMQTHKGSVFAVFL--EGKWLFTGGWDKTVSV 488 (552)
Q Consensus 417 ~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~~------~~~~~~~h~~~v~~v~~--~~~~l~sgs~dg~i~i 488 (552)
.+..|. ..+.+ +.|+|...++++|+.|..|++-|+.. ++.....|...+..+.| ..--+++.+.|.++.+
T Consensus 268 ~f~phs-adir~-vrfsp~a~yllt~syd~~ikltdlqgdla~el~~~vv~ehkdk~i~~rwh~~d~sfisssadkt~tl 345 (350)
T KOG0641|consen 268 RFHPHS-ADIRC-VRFSPGAHYLLTCSYDMKIKLTDLQGDLAHELPIMVVAEHKDKAIQCRWHPQDFSFISSSADKTATL 345 (350)
T ss_pred eeCCCc-cceeE-EEeCCCceEEEEecccceEEEeecccchhhcCceEEEEeccCceEEEEecCccceeeeccCcceEEE
Confidence 997763 44555 69999999999999999999999652 34456679888888887 5567888999999999
Q ss_pred EecC
Q 008820 489 QELA 492 (552)
Q Consensus 489 wd~~ 492 (552)
|-+.
T Consensus 346 wa~~ 349 (350)
T KOG0641|consen 346 WALN 349 (350)
T ss_pred eccC
Confidence 9764
No 111
>KOG0321 consensus WD40 repeat-containing protein L2DTL [Function unknown]
Probab=99.90 E-value=3.4e-22 Score=192.40 Aligned_cols=249 Identities=18% Similarity=0.263 Sum_probs=184.6
Q ss_pred EEeecCccceEEEEEc--CCEEEEEeCCCcEEEEeCCCCeEEEE--EeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEe
Q 008820 246 KDLQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHT--FKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWS 321 (552)
Q Consensus 246 ~~l~~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~~~~~~--~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd 321 (552)
.....|.++|..+.|. ...|++++.|.++++||+++.++... +.+|...|.+++|.|.+..+|++|+.||.|.|||
T Consensus 94 k~~~aH~nAifDl~wapge~~lVsasGDsT~r~Wdvk~s~l~G~~~~~GH~~SvkS~cf~~~n~~vF~tGgRDg~illWD 173 (720)
T KOG0321|consen 94 KKPLAHKNAIFDLKWAPGESLLVSASGDSTIRPWDVKTSRLVGGRLNLGHTGSVKSECFMPTNPAVFCTGGRDGEILLWD 173 (720)
T ss_pred cccccccceeEeeccCCCceeEEEccCCceeeeeeeccceeecceeecccccccchhhhccCCCcceeeccCCCcEEEEE
Confidence 3456899999999999 67899999999999999999998876 8999999999999999999999999999999999
Q ss_pred CCCCCCC--------------------c----cccccccCCCceeeeEE-EEeeCCCEEEEeeC-CCcEEEEECCCCcee
Q 008820 322 FSFPLGH--------------------E----PLKKWNEEKDWRYSGIH-ALTTSGRYLYTGSG-DRTIKAWSLLDGTLS 375 (552)
Q Consensus 322 ~~~~~~~--------------------~----~~~~~~~~~~~~~~~~~-~~~~~~~~l~sgs~-dg~i~iwd~~~~~~~ 375 (552)
++-.... + .+..+..+.......+. -+..|...|++++. |+.|++||++.....
T Consensus 174 ~R~n~~d~~e~~~~~~~~~~n~~ptpskp~~kr~~k~kA~s~ti~ssvTvv~fkDe~tlaSaga~D~~iKVWDLRk~~~~ 253 (720)
T KOG0321|consen 174 CRCNGVDALEEFDNRIYGRHNTAPTPSKPLKKRIRKWKAASNTIFSSVTVVLFKDESTLASAGAADSTIKVWDLRKNYTA 253 (720)
T ss_pred EeccchhhHHHHhhhhhccccCCCCCCchhhccccccccccCceeeeeEEEEEeccceeeeccCCCcceEEEeecccccc
Confidence 8743200 0 01111111111111122 23446778999887 999999999865433
Q ss_pred EE--------ecCC---CCCeEEEEEe--CCEEEEEeCCCcEEEEECCCCc--eeEEEecCCCCceEEEEEEcCCCCEEE
Q 008820 376 CT--------MSGH---KSAVSTLAVC--NGVLYSGSRDGTIRLWSLSDHS--LLTVLEEDSSGAVSSVLSLTAVQHTLV 440 (552)
Q Consensus 376 ~~--------~~~h---~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~--~~~~~~~~~~~~~~~~~~~s~~~~~l~ 440 (552)
.. +..| .-.+.++..+ +.+|++.+.|++|++||+.+.. ++..+.++........-..+|++.+++
T Consensus 254 ~r~ep~~~~~~~t~skrs~G~~nL~lDssGt~L~AsCtD~sIy~ynm~s~s~sP~~~~sg~~~~sf~vks~lSpd~~~l~ 333 (720)
T KOG0321|consen 254 YRQEPRGSDKYPTHSKRSVGQVNLILDSSGTYLFASCTDNSIYFYNMRSLSISPVAEFSGKLNSSFYVKSELSPDDCSLL 333 (720)
T ss_pred cccCCCcccCccCcccceeeeEEEEecCCCCeEEEEecCCcEEEEeccccCcCchhhccCcccceeeeeeecCCCCceEe
Confidence 22 2223 2245666665 5688877889999999998644 344444443333333346799999999
Q ss_pred EEECCCcEEEEeCCc---ceeeeecccceEEEEEe---cCCEEEEEeCCCeEEEEecCCC
Q 008820 441 VSHESGSIKVWRNDK---FMKSMQTHKGSVFAVFL---EGKWLFTGGWDKTVSVQELAGD 494 (552)
Q Consensus 441 ~g~~dg~i~iwd~~~---~~~~~~~h~~~v~~v~~---~~~~l~sgs~dg~i~iwd~~~~ 494 (552)
+|+.|...++|.+.. ....+.+|...|+++.| .-.-+++++.|.++++|++..+
T Consensus 334 SgSsd~~ayiw~vs~~e~~~~~l~Ght~eVt~V~w~pS~~t~v~TcSdD~~~kiW~l~~~ 393 (720)
T KOG0321|consen 334 SGSSDEQAYIWVVSSPEAPPALLLGHTREVTTVRWLPSATTPVATCSDDFRVKIWRLSNG 393 (720)
T ss_pred ccCCCcceeeeeecCccCChhhhhCcceEEEEEeeccccCCCceeeccCcceEEEeccCc
Confidence 999999999998664 45678899999999998 4445677799999999999644
No 112
>KOG0269 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.90 E-value=1.5e-23 Score=205.89 Aligned_cols=233 Identities=16% Similarity=0.292 Sum_probs=183.4
Q ss_pred eEEEEEc---CCEEEEEeCCCcEEEEeCCC---CeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCC
Q 008820 255 VTGLAVG---GGFLFSSSFDKSIHVWSLKD---FSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGH 328 (552)
Q Consensus 255 V~~l~~s---~~~l~s~s~dg~I~iwd~~~---~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~ 328 (552)
+..+.|+ .++|||++..|.|.+||+.. .+.+..|..|...++++.|++...++|++|+.||+|++||++..+..
T Consensus 90 ~~DVkW~~~~~NlIAT~s~nG~i~vWdlnk~~rnk~l~~f~EH~Rs~~~ldfh~tep~iliSGSQDg~vK~~DlR~~~S~ 169 (839)
T KOG0269|consen 90 AADVKWGQLYSNLIATCSTNGVISVWDLNKSIRNKLLTVFNEHERSANKLDFHSTEPNILISGSQDGTVKCWDLRSKKSK 169 (839)
T ss_pred hhhcccccchhhhheeecCCCcEEEEecCccccchhhhHhhhhccceeeeeeccCCccEEEecCCCceEEEEeeeccccc
Confidence 3456666 89999999999999999986 55667888999999999999999999999999999999999976655
Q ss_pred ccccccccCCCceeeeEEEEeeC-CCEEEEeeCCCcEEEEECCCC-ceeEEecCCCCCeEEEEEeCC--EEEEEeCCCcE
Q 008820 329 EPLKKWNEEKDWRYSGIHALTTS-GRYLYTGSGDRTIKAWSLLDG-TLSCTMSGHKSAVSTLAVCNG--VLYSGSRDGTI 404 (552)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~-~~~l~sgs~dg~i~iwd~~~~-~~~~~~~~h~~~v~~l~~~~~--~l~s~~~dg~i 404 (552)
.....-.. .... ..|+|. ++.|+++.+.|.+.+||++.. ++...+.+|.++|.|+.|+++ +|||||.|+.|
T Consensus 170 ~t~~~nSE----SiRD-V~fsp~~~~~F~s~~dsG~lqlWDlRqp~r~~~k~~AH~GpV~c~nwhPnr~~lATGGRDK~v 244 (839)
T KOG0269|consen 170 STFRSNSE----SIRD-VKFSPGYGNKFASIHDSGYLQLWDLRQPDRCEKKLTAHNGPVLCLNWHPNREWLATGGRDKMV 244 (839)
T ss_pred ccccccch----hhhc-eeeccCCCceEEEecCCceEEEeeccCchhHHHHhhcccCceEEEeecCCCceeeecCCCccE
Confidence 44443111 1112 245553 669999999999999999854 567788999999999999944 99999999999
Q ss_pred EEEECCCCceeEEEecCCCCceEEEEEEcCCCC-EEEEEE--CCCcEEEEeCCc---ceeeeecccceEEEEEe---cCC
Q 008820 405 RLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQH-TLVVSH--ESGSIKVWRNDK---FMKSMQTHKGSVFAVFL---EGK 475 (552)
Q Consensus 405 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~-~l~~g~--~dg~i~iwd~~~---~~~~~~~h~~~v~~v~~---~~~ 475 (552)
+|||+.+++.......+...++.. +.|-|... .|++++ .|-.|+|||++. +..++..|+..++.+.| |..
T Consensus 245 kiWd~t~~~~~~~~tInTiapv~r-VkWRP~~~~hLAtcsmv~dtsV~VWDvrRPYIP~~t~~eH~~~vt~i~W~~~d~~ 323 (839)
T KOG0269|consen 245 KIWDMTDSRAKPKHTINTIAPVGR-VKWRPARSYHLATCSMVVDTSVHVWDVRRPYIPYATFLEHTDSVTGIAWDSGDRI 323 (839)
T ss_pred EEEeccCCCccceeEEeecceeee-eeeccCccchhhhhhccccceEEEEeeccccccceeeeccCccccceeccCCCce
Confidence 999998766544444343344444 68887764 556554 478899999886 56788899999999999 456
Q ss_pred EEEEEeCCCeEEEEecCC
Q 008820 476 WLFTGGWDKTVSVQELAG 493 (552)
Q Consensus 476 ~l~sgs~dg~i~iwd~~~ 493 (552)
.+.+++.||+|..-.+++
T Consensus 324 ~l~s~sKD~tv~qh~~kn 341 (839)
T KOG0269|consen 324 NLWSCSKDGTVLQHLFKN 341 (839)
T ss_pred eeEeecCccHHHHhhhhc
Confidence 889999999887655543
No 113
>KOG2096 consensus WD40 repeat protein [General function prediction only]
Probab=99.90 E-value=8.7e-22 Score=174.47 Aligned_cols=282 Identities=20% Similarity=0.326 Sum_probs=200.1
Q ss_pred EEEeecCccceEEEEEc--CCEEEEEeCCCcEEEEeCCCCeE-----EEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcE
Q 008820 245 FKDLQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSH-----VHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGI 317 (552)
Q Consensus 245 ~~~l~~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~~~-----~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i 317 (552)
+..|+||.+.|++++|+ |++|+|++.|++|++|+++.... ++. .-.-+..+.++|.|+-..+++++-...++
T Consensus 79 ~~~LKgH~~~vt~~~FsSdGK~lat~~~Dr~Ir~w~~~DF~~~eHr~~R~-nve~dhpT~V~FapDc~s~vv~~~~g~~l 157 (420)
T KOG2096|consen 79 VSVLKGHKKEVTDVAFSSDGKKLATISGDRSIRLWDVRDFENKEHRCIRQ-NVEYDHPTRVVFAPDCKSVVVSVKRGNKL 157 (420)
T ss_pred hhhhhccCCceeeeEEcCCCceeEEEeCCceEEEEecchhhhhhhhHhhc-cccCCCceEEEECCCcceEEEEEccCCEE
Confidence 34589999999999999 99999999999999999976432 111 11123568899999999999999999999
Q ss_pred EEEeCCCCCCCc---cccccccCC--CceeeeEE--EEeeCCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEE
Q 008820 318 FVWSFSFPLGHE---PLKKWNEEK--DWRYSGIH--ALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAV 390 (552)
Q Consensus 318 ~vwd~~~~~~~~---~~~~~~~~~--~~~~~~~~--~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~ 390 (552)
++|.+....... ....+..++ ..+...+. .+.-.+.+|++++.|..|.+|+++ |+.+..+......-+..+.
T Consensus 158 ~vyk~~K~~dG~~~~~~v~~D~~~f~~kh~v~~i~iGiA~~~k~imsas~dt~i~lw~lk-Gq~L~~idtnq~~n~~aav 236 (420)
T KOG2096|consen 158 CVYKLVKKTDGSGSHHFVHIDNLEFERKHQVDIINIGIAGNAKYIMSASLDTKICLWDLK-GQLLQSIDTNQSSNYDAAV 236 (420)
T ss_pred EEEEeeecccCCCCcccccccccccchhcccceEEEeecCCceEEEEecCCCcEEEEecC-Cceeeeeccccccccceee
Confidence 999876433211 111111110 01112222 334456699999999999999998 9999988877777777778
Q ss_pred e-CC-EEEEEeCCCcEEEEECC---CCc-----eeEEEecCCCCceEEEEEEcCCCCEEEEEECCCcEEEEeCC------
Q 008820 391 C-NG-VLYSGSRDGTIRLWSLS---DHS-----LLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRND------ 454 (552)
Q Consensus 391 ~-~~-~l~s~~~dg~i~iwd~~---~~~-----~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~------ 454 (552)
+ ++ ++++++----|++|.+- .|. .+..+++|.. .+.. ++|+++...+++.+.||++++||+.
T Consensus 237 SP~GRFia~~gFTpDVkVwE~~f~kdG~fqev~rvf~LkGH~s-aV~~-~aFsn~S~r~vtvSkDG~wriwdtdVrY~~~ 314 (420)
T KOG2096|consen 237 SPDGRFIAVSGFTPDVKVWEPIFTKDGTFQEVKRVFSLKGHQS-AVLA-AAFSNSSTRAVTVSKDGKWRIWDTDVRYEAG 314 (420)
T ss_pred CCCCcEEEEecCCCCceEEEEEeccCcchhhhhhhheeccchh-heee-eeeCCCcceeEEEecCCcEEEeeccceEecC
Confidence 8 33 88888888899999873 222 3445666643 3333 7999999999999999999999854
Q ss_pred c---ceeee--ecc---cceE-EEEEecCCEEEEEeCCCeEEEEecCCCeeeeeeccCCCcccCcceEEEEEeC-CeEEE
Q 008820 455 K---FMKSM--QTH---KGSV-FAVFLEGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQ-GKLFV 524 (552)
Q Consensus 455 ~---~~~~~--~~h---~~~v-~~v~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~~-~~l~s 524 (552)
+ .++.. ..| ..++ .+++|+|+.|+.+. ...++++..++++....+... |...|++++|++ ++.+.
T Consensus 315 qDpk~Lk~g~~pl~aag~~p~RL~lsP~g~~lA~s~-gs~l~~~~se~g~~~~~~e~~----h~~~Is~is~~~~g~~~a 389 (420)
T KOG2096|consen 315 QDPKILKEGSAPLHAAGSEPVRLELSPSGDSLAVSF-GSDLKVFASEDGKDYPELEDI----HSTTISSISYSSDGKYIA 389 (420)
T ss_pred CCchHhhcCCcchhhcCCCceEEEeCCCCcEEEeec-CCceEEEEcccCccchhHHHh----hcCceeeEEecCCCcEEe
Confidence 1 11111 011 1233 46678999888765 468999999887655544432 367799999994 66777
Q ss_pred EeCCCeEEEEE
Q 008820 525 GCADRTVKIAL 535 (552)
Q Consensus 525 ~s~Dg~v~iw~ 535 (552)
.+.|..+++..
T Consensus 390 tcGdr~vrv~~ 400 (420)
T KOG2096|consen 390 TCGDRYVRVIR 400 (420)
T ss_pred eecceeeeeec
Confidence 77788999886
No 114
>KOG1332 consensus Vesicle coat complex COPII, subunit SEC13 [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.90 E-value=1.5e-22 Score=172.93 Aligned_cols=228 Identities=24% Similarity=0.328 Sum_probs=168.0
Q ss_pred ccceeeecCcceEEEeeCCCeEEEE------------EeecCccceEEEEEc----CCEEEEEeCCCcEEEEeCCCCeE-
Q 008820 222 IDQARAAGGVKDLVNGLSKGNVKFK------------DLQGHRDCVTGLAVG----GGFLFSSSFDKSIHVWSLKDFSH- 284 (552)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~------------~l~~H~~~V~~l~~s----~~~l~s~s~dg~I~iwd~~~~~~- 284 (552)
+..+...-.++++++..+|+.+++. +|.||+++|+.++|. |.+||++++||.|.||.-++++-
T Consensus 14 IHda~lDyygkrlATcsSD~tVkIf~v~~n~~s~ll~~L~Gh~GPVwqv~wahPk~G~iLAScsYDgkVIiWke~~g~w~ 93 (299)
T KOG1332|consen 14 IHDAQLDYYGKRLATCSSDGTVKIFEVRNNGQSKLLAELTGHSGPVWKVAWAHPKFGTILASCSYDGKVIIWKEENGRWT 93 (299)
T ss_pred hhHhhhhhhcceeeeecCCccEEEEEEcCCCCceeeeEecCCCCCeeEEeecccccCcEeeEeecCceEEEEecCCCchh
Confidence 4444444556677777776666654 588999999999997 99999999999999999887743
Q ss_pred -EEEEeCCCCCeEEEEEecCC-CCEEEEEcCCCcEEEEeCCCCCCCccccccccCCCceeeeEEEEeeC---C-------
Q 008820 285 -VHTFKGHDHKVMAVVYVDED-QPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTS---G------- 352 (552)
Q Consensus 285 -~~~~~~h~~~v~~v~~~~~~-~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~------- 352 (552)
......|...|++++|.|.+ +.+|++++.||.|.+.+.+....-...+....|.. -.. ..++.|. |
T Consensus 94 k~~e~~~h~~SVNsV~wapheygl~LacasSDG~vsvl~~~~~g~w~t~ki~~aH~~-Gvn-sVswapa~~~g~~~~~~~ 171 (299)
T KOG1332|consen 94 KAYEHAAHSASVNSVAWAPHEYGLLLACASSDGKVSVLTYDSSGGWTTSKIVFAHEI-GVN-SVSWAPASAPGSLVDQGP 171 (299)
T ss_pred hhhhhhhhcccceeecccccccceEEEEeeCCCcEEEEEEcCCCCccchhhhhcccc-ccc-eeeecCcCCCccccccCc
Confidence 34556899999999999864 45788999999999999986522222222222211 111 1233332 2
Q ss_pred ----CEEEEeeCCCcEEEEECCCCc--eeEEecCCCCCeEEEEEeC------CEEEEEeCCCcEEEEECCCCc--eeEEE
Q 008820 353 ----RYLYTGSGDRTIKAWSLLDGT--LSCTMSGHKSAVSTLAVCN------GVLYSGSRDGTIRLWSLSDHS--LLTVL 418 (552)
Q Consensus 353 ----~~l~sgs~dg~i~iwd~~~~~--~~~~~~~h~~~v~~l~~~~------~~l~s~~~dg~i~iwd~~~~~--~~~~~ 418 (552)
+.|++|+.|..|+||+..+++ .-+++.+|.+.|..++|.+ ..+++++.||++.||-.+... -..++
T Consensus 172 ~~~~krlvSgGcDn~VkiW~~~~~~w~~e~~l~~H~dwVRDVAwaP~~gl~~s~iAS~SqDg~viIwt~~~e~e~wk~tl 251 (299)
T KOG1332|consen 172 AAKVKRLVSGGCDNLVKIWKFDSDSWKLERTLEGHKDWVRDVAWAPSVGLPKSTIASCSQDGTVIIWTKDEEYEPWKKTL 251 (299)
T ss_pred ccccceeeccCCccceeeeecCCcchhhhhhhhhcchhhhhhhhccccCCCceeeEEecCCCcEEEEEecCccCcccccc
Confidence 479999999999999998763 3446899999999999983 289999999999999876321 12222
Q ss_pred ecCCCCceEEEEEEcCCCCEEEEEECCCcEEEEe
Q 008820 419 EEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWR 452 (552)
Q Consensus 419 ~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd 452 (552)
....+..+.. ++||..|+.|++++.|+.|.+|.
T Consensus 252 l~~f~~~~w~-vSWS~sGn~LaVs~GdNkvtlwk 284 (299)
T KOG1332|consen 252 LEEFPDVVWR-VSWSLSGNILAVSGGDNKVTLWK 284 (299)
T ss_pred cccCCcceEE-EEEeccccEEEEecCCcEEEEEE
Confidence 2222445555 69999999999999999999996
No 115
>KOG2106 consensus Uncharacterized conserved protein, contains HELP and WD40 domains [Function unknown]
Probab=99.90 E-value=1.5e-20 Score=176.24 Aligned_cols=322 Identities=17% Similarity=0.230 Sum_probs=232.7
Q ss_pred CCCCCccccceeeecCcceEEEeeCCC--------eEEEEE---------eecCccceEEEEEc----CCEEEEE--eCC
Q 008820 215 ENSDGADIDQARAAGGVKDLVNGLSKG--------NVKFKD---------LQGHRDCVTGLAVG----GGFLFSS--SFD 271 (552)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~---------l~~H~~~V~~l~~s----~~~l~s~--s~d 271 (552)
...++..+.+....++-..++++-..+ .+++|+ +..-...|.|++|+ |.+++.- +.+
T Consensus 100 y~GH~ddikc~~vHPdri~vatGQ~ag~~g~~~~phvriWdsv~L~TL~V~g~f~~GV~~vaFsk~~~G~~l~~vD~s~~ 179 (626)
T KOG2106|consen 100 YLGHNDDIKCMAVHPDRIRVATGQGAGTSGRPLQPHVRIWDSVTLSTLHVIGFFDRGVTCVAFSKINGGSLLCAVDDSNP 179 (626)
T ss_pred ccCCCCceEEEeecCCceeeccCcccccCCCcCCCeeeecccccceeeeeeccccccceeeeecccCCCceEEEecCCCc
Confidence 334444555666665555555443333 345555 34566789999998 6666554 456
Q ss_pred CcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCccccccccCCCceeeeEEEEeeC
Q 008820 272 KSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTS 351 (552)
Q Consensus 272 g~I~iwd~~~~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (552)
..+.|||...+......+..++.|....|+|.+.+++++++. +.+.+|+.+.+...+....+..... ....+.+|.++
T Consensus 180 h~lSVWdWqk~~~~~~vk~sne~v~~a~FHPtd~nliit~Gk-~H~~Fw~~~~~~l~k~~~~fek~ek-k~Vl~v~F~en 257 (626)
T KOG2106|consen 180 HMLSVWDWQKKAKLGPVKTSNEVVFLATFHPTDPNLIITCGK-GHLYFWTLRGGSLVKRQGIFEKREK-KFVLCVTFLEN 257 (626)
T ss_pred cccchhhchhhhccCcceeccceEEEEEeccCCCcEEEEeCC-ceEEEEEccCCceEEEeeccccccc-eEEEEEEEcCC
Confidence 678999999888888888888999999999999999888875 8999999988766665555555544 33334455566
Q ss_pred CCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe-CCEEEEEeCCCcEEEEECCCCcee------------EEE
Q 008820 352 GRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC-NGVLYSGSRDGTIRLWSLSDHSLL------------TVL 418 (552)
Q Consensus 352 ~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~-~~~l~s~~~dg~i~iwd~~~~~~~------------~~~ 418 (552)
|+ +++|..+|.|.||+..+.+..+....|.+.|.+++.. ++.|++|+.|..|..||- .-+.+ +++
T Consensus 258 gd-viTgDS~G~i~Iw~~~~~~~~k~~~aH~ggv~~L~~lr~GtllSGgKDRki~~Wd~-~y~k~r~~elPe~~G~iRtv 335 (626)
T KOG2106|consen 258 GD-VITGDSGGNILIWSKGTNRISKQVHAHDGGVFSLCMLRDGTLLSGGKDRKIILWDD-NYRKLRETELPEQFGPIRTV 335 (626)
T ss_pred CC-EEeecCCceEEEEeCCCceEEeEeeecCCceEEEEEecCccEeecCccceEEeccc-cccccccccCchhcCCeeEE
Confidence 54 8899999999999998888877777999999999998 789999999999999993 21111 111
Q ss_pred ecCC----------------------------CCceEEEEEEcCCCCEEEEEECCCcEEEEeCCcceeeeecccceEEEE
Q 008820 419 EEDS----------------------------SGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDKFMKSMQTHKGSVFAV 470 (552)
Q Consensus 419 ~~~~----------------------------~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~~~~~~~~~h~~~v~~v 470 (552)
.... ...... ++..|+.+.+++++.|+.+++|+-.+++.+.. -..++.|+
T Consensus 336 ~e~~~di~vGTtrN~iL~Gt~~~~f~~~v~gh~delwg-la~hps~~q~~T~gqdk~v~lW~~~k~~wt~~-~~d~~~~~ 413 (626)
T KOG2106|consen 336 AEGKGDILVGTTRNFILQGTLENGFTLTVQGHGDELWG-LATHPSKNQLLTCGQDKHVRLWNDHKLEWTKI-IEDPAECA 413 (626)
T ss_pred ecCCCcEEEeeccceEEEeeecCCceEEEEecccceee-EEcCCChhheeeccCcceEEEccCCceeEEEE-ecCceeEe
Confidence 1110 111112 56678888999999999999999555544433 23445555
Q ss_pred Ee--cCCEEEEEeCCCeEEEEecCCCeeeeeeccCCCcccCcceEEEEEeC--CeEEEEeCCCeEEEEEecCCcceeEEE
Q 008820 471 FL--EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQ--GKLFVGCADRTVKIALCNRQIPEIFSL 546 (552)
Q Consensus 471 ~~--~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~~--~~l~s~s~Dg~v~iw~~~~~~~~~~~~ 546 (552)
.| .| .++.|+..|...+.|.++..+...-.. ..+++++.|+| ..|+.|+.|+.|+||.++.++.....+
T Consensus 414 ~fhpsg-~va~Gt~~G~w~V~d~e~~~lv~~~~d------~~~ls~v~ysp~G~~lAvgs~d~~iyiy~Vs~~g~~y~r~ 486 (626)
T KOG2106|consen 414 DFHPSG-VVAVGTATGRWFVLDTETQDLVTIHTD------NEQLSVVRYSPDGAFLAVGSHDNHIYIYRVSANGRKYSRV 486 (626)
T ss_pred eccCcc-eEEEeeccceEEEEecccceeEEEEec------CCceEEEEEcCCCCEEEEecCCCeEEEEEECCCCcEEEEe
Confidence 54 67 999999999999999998655443222 66799999996 459999999999999999877765554
Q ss_pred ecc
Q 008820 547 LLH 549 (552)
Q Consensus 547 ~gh 549 (552)
.-|
T Consensus 487 ~k~ 489 (626)
T KOG2106|consen 487 GKC 489 (626)
T ss_pred eee
Confidence 433
No 116
>KOG1407 consensus WD40 repeat protein [Function unknown]
Probab=99.90 E-value=4.7e-21 Score=165.47 Aligned_cols=253 Identities=15% Similarity=0.157 Sum_probs=202.1
Q ss_pred cccceeeecCcceEEEeeCCCeEEEEEe-----------ecCccceEEEEEc---CCEEEEEeCCCcEEEEeCCCCeEEE
Q 008820 221 DIDQARAAGGVKDLVNGLSKGNVKFKDL-----------QGHRDCVTGLAVG---GGFLFSSSFDKSIHVWSLKDFSHVH 286 (552)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l-----------~~H~~~V~~l~~s---~~~l~s~s~dg~I~iwd~~~~~~~~ 286 (552)
.+..+.+...+..++++..++.+.+|.+ .||.+.|-.++|+ .+.+++++.|.+|++||...+++..
T Consensus 22 ~v~Sv~wn~~g~~lasgs~dktv~v~n~e~~r~~~~~~~~gh~~svdql~w~~~~~d~~atas~dk~ir~wd~r~~k~~~ 101 (313)
T KOG1407|consen 22 KVHSVAWNCDGTKLASGSFDKTVSVWNLERDRFRKELVYRGHTDSVDQLCWDPKHPDLFATASGDKTIRIWDIRSGKCTA 101 (313)
T ss_pred cceEEEEcccCceeeecccCCceEEEEecchhhhhhhcccCCCcchhhheeCCCCCcceEEecCCceEEEEEeccCcEEE
Confidence 4677888889999999999999999874 5899999999998 8999999999999999999999999
Q ss_pred EEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEE
Q 008820 287 TFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKA 366 (552)
Q Consensus 287 ~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~i 366 (552)
......+.+ -+.|+|+++ +++.++.|..|.+.|.++.+.....+.... . .-.+++.+++.++.....|.|.|
T Consensus 102 ~i~~~~eni-~i~wsp~g~-~~~~~~kdD~it~id~r~~~~~~~~~~~~e-----~-ne~~w~~~nd~Fflt~GlG~v~I 173 (313)
T KOG1407|consen 102 RIETKGENI-NITWSPDGE-YIAVGNKDDRITFIDARTYKIVNEEQFKFE-----V-NEISWNNSNDLFFLTNGLGCVEI 173 (313)
T ss_pred EeeccCcce-EEEEcCCCC-EEEEecCcccEEEEEecccceeehhcccce-----e-eeeeecCCCCEEEEecCCceEEE
Confidence 887655554 567899777 668899999999999986544333222211 1 11245566677777677799999
Q ss_pred EECCCCceeEEecCCCCCeEEEEEe--CCEEEEEeCCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEEC
Q 008820 367 WSLLDGTLSCTMSGHKSAVSTLAVC--NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHE 444 (552)
Q Consensus 367 wd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~ 444 (552)
.....-+++..+++|.....|+.|+ +.++++|+.|..+.+||+...-+++.+.... -++.. ++|+.+|++|++|++
T Consensus 174 LsypsLkpv~si~AH~snCicI~f~p~GryfA~GsADAlvSLWD~~ELiC~R~isRld-wpVRT-lSFS~dg~~lASaSE 251 (313)
T KOG1407|consen 174 LSYPSLKPVQSIKAHPSNCICIEFDPDGRYFATGSADALVSLWDVDELICERCISRLD-WPVRT-LSFSHDGRMLASASE 251 (313)
T ss_pred EeccccccccccccCCcceEEEEECCCCceEeeccccceeeccChhHhhhheeecccc-CceEE-EEeccCcceeeccCc
Confidence 9999999999999999999999999 4499999999999999999888888887653 33444 799999999999999
Q ss_pred CCcEEEEeCCcceeeee-cccceEEEEEe--cCCEEEEEeCC
Q 008820 445 SGSIKVWRNDKFMKSMQ-THKGSVFAVFL--EGKWLFTGGWD 483 (552)
Q Consensus 445 dg~i~iwd~~~~~~~~~-~h~~~v~~v~~--~~~~l~sgs~d 483 (552)
|-.|-|=+..+.-+..+ .+.++...++| ...+||-++.|
T Consensus 252 Dh~IDIA~vetGd~~~eI~~~~~t~tVAWHPk~~LLAyA~dd 293 (313)
T KOG1407|consen 252 DHFIDIAEVETGDRVWEIPCEGPTFTVAWHPKRPLLAYACDD 293 (313)
T ss_pred cceEEeEecccCCeEEEeeccCCceeEEecCCCceeeEEecC
Confidence 99999888665544443 35778888888 45566666544
No 117
>KOG0294 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.90 E-value=1.1e-21 Score=173.87 Aligned_cols=218 Identities=18% Similarity=0.231 Sum_probs=179.0
Q ss_pred ecCcceEEEeeCCCeEEEEEe---------ecCccceEEEEEc----CCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCC
Q 008820 228 AGGVKDLVNGLSKGNVKFKDL---------QGHRDCVTGLAVG----GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHK 294 (552)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~l---------~~H~~~V~~l~~s----~~~l~s~s~dg~I~iwd~~~~~~~~~~~~h~~~ 294 (552)
+..+..+++++.|..+.++++ ..|.+.|+++.|. ...|++|+.||.|.+|+.....++.++++|.+.
T Consensus 50 AVs~~~~aSGssDetI~IYDm~k~~qlg~ll~HagsitaL~F~~~~S~shLlS~sdDG~i~iw~~~~W~~~~slK~H~~~ 129 (362)
T KOG0294|consen 50 AVSGPYVASGSSDETIHIYDMRKRKQLGILLSHAGSITALKFYPPLSKSHLLSGSDDGHIIIWRVGSWELLKSLKAHKGQ 129 (362)
T ss_pred EecceeEeccCCCCcEEEEeccchhhhcceeccccceEEEEecCCcchhheeeecCCCcEEEEEcCCeEEeeeecccccc
Confidence 345688899999999999885 4699999999998 348999999999999999999999999999999
Q ss_pred eEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCce
Q 008820 295 VMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTL 374 (552)
Q Consensus 295 v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~ 374 (552)
|+.++.+|.+. +.++.+.|+.++.||+-.++.......-. ......|++.|.+++.++.++ |-+|.+.+.+.
T Consensus 130 Vt~lsiHPS~K-LALsVg~D~~lr~WNLV~Gr~a~v~~L~~------~at~v~w~~~Gd~F~v~~~~~-i~i~q~d~A~v 201 (362)
T KOG0294|consen 130 VTDLSIHPSGK-LALSVGGDQVLRTWNLVRGRVAFVLNLKN------KATLVSWSPQGDHFVVSGRNK-IDIYQLDNASV 201 (362)
T ss_pred cceeEecCCCc-eEEEEcCCceeeeehhhcCccceeeccCC------cceeeEEcCCCCEEEEEeccE-EEEEecccHhH
Confidence 99999999655 88899999999999998776544433221 223467889999888888754 89999988776
Q ss_pred eEEecCCCCCeEEEEEe-CCEEEEEeCCCcEEEEECCCCceeEEEecCCCCceEEEE-EEcCCCCEEEEEECCCcEEEEe
Q 008820 375 SCTMSGHKSAVSTLAVC-NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVL-SLTAVQHTLVVSHESGSIKVWR 452 (552)
Q Consensus 375 ~~~~~~h~~~v~~l~~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~-~~s~~~~~l~~g~~dg~i~iwd 452 (552)
...+.. ...+.|+.|. .+.+++|+.|+.|.+||..+..+...+..|. ..+-.+. .-.|++.+|++++.||.|++||
T Consensus 202 ~~~i~~-~~r~l~~~~l~~~~L~vG~d~~~i~~~D~ds~~~~~~~~AH~-~RVK~i~~~~~~~~~~lvTaSSDG~I~vWd 279 (362)
T KOG0294|consen 202 FREIEN-PKRILCATFLDGSELLVGGDNEWISLKDTDSDTPLTEFLAHE-NRVKDIASYTNPEHEYLVTASSDGFIKVWD 279 (362)
T ss_pred hhhhhc-cccceeeeecCCceEEEecCCceEEEeccCCCccceeeecch-hheeeeEEEecCCceEEEEeccCceEEEEE
Confidence 665543 3567888888 6699999999999999999988888888874 4444443 3367788999999999999999
Q ss_pred CCc
Q 008820 453 NDK 455 (552)
Q Consensus 453 ~~~ 455 (552)
...
T Consensus 280 ~~~ 282 (362)
T KOG0294|consen 280 IDM 282 (362)
T ss_pred ccc
Confidence 653
No 118
>KOG0270 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.89 E-value=3.3e-22 Score=184.79 Aligned_cols=222 Identities=21% Similarity=0.297 Sum_probs=171.8
Q ss_pred cCcceEEEeeCCCeEEEEEe------------------------------ecCccceEEEEEc---CCEEEEEeCCCcEE
Q 008820 229 GGVKDLVNGLSKGNVKFKDL------------------------------QGHRDCVTGLAVG---GGFLFSSSFDKSIH 275 (552)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~l------------------------------~~H~~~V~~l~~s---~~~l~s~s~dg~I~ 275 (552)
+.++.++.|.-+..+.+|+| .+|+++|.+++|+ .+.|||||.|.+|+
T Consensus 190 ~~gNyvAiGtmdp~IeIWDLDI~d~v~P~~~LGs~~sk~~~k~~k~~~~~~gHTdavl~Ls~n~~~~nVLaSgsaD~TV~ 269 (463)
T KOG0270|consen 190 GAGNYVAIGTMDPEIEIWDLDIVDAVLPCVTLGSKASKKKKKKGKRSNSASGHTDAVLALSWNRNFRNVLASGSADKTVK 269 (463)
T ss_pred CCcceEEEeccCceeEEeccccccccccceeechhhhhhhhhhcccccccccchHHHHHHHhccccceeEEecCCCceEE
Confidence 44667888888888888874 2699999999998 88999999999999
Q ss_pred EEeCCCCeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCccccccccCCCceeeeEEEEeeC-CCE
Q 008820 276 VWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTS-GRY 354 (552)
Q Consensus 276 iwd~~~~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 354 (552)
+||+.++++..++..|...|.++.|+|....+|++|+.|++|.+.|.+........-.+.+. . ....+.+. ...
T Consensus 270 lWD~~~g~p~~s~~~~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~~~~s~~~wk~~g~----V-Ekv~w~~~se~~ 344 (463)
T KOG0270|consen 270 LWDVDTGKPKSSITHHGKKVQTLEWHPYEPSVLLSGSYDGTVALKDCRDPSNSGKEWKFDGE----V-EKVAWDPHSENS 344 (463)
T ss_pred EEEcCCCCcceehhhcCCceeEEEecCCCceEEEeccccceEEeeeccCccccCceEEeccc----e-EEEEecCCCcee
Confidence 99999999999999999999999999999999999999999999999853322211111111 1 12244443 448
Q ss_pred EEEeeCCCcEEEEECCCC-ceeEEecCCCCCeEEEEEe---CCEEEEEeCCCcEEEEECCCCceeEEEecCCCCceEEEE
Q 008820 355 LYTGSGDRTIKAWSLLDG-TLSCTMSGHKSAVSTLAVC---NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVL 430 (552)
Q Consensus 355 l~sgs~dg~i~iwd~~~~-~~~~~~~~h~~~v~~l~~~---~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 430 (552)
+++++.||+|+-+|+++. ++++++..|.++|++++++ ++++++++.|+.+++|++..............-....+.
T Consensus 345 f~~~tddG~v~~~D~R~~~~~vwt~~AHd~~ISgl~~n~~~p~~l~t~s~d~~Vklw~~~~~~~~~v~~~~~~~~rl~c~ 424 (463)
T KOG0270|consen 345 FFVSTDDGTVYYFDIRNPGKPVWTLKAHDDEISGLSVNIQTPGLLSTASTDKVVKLWKFDVDSPKSVKEHSFKLGRLHCF 424 (463)
T ss_pred EEEecCCceEEeeecCCCCCceeEEEeccCCcceEEecCCCCcceeeccccceEEEEeecCCCCcccccccccccceeec
Confidence 889999999999999865 9999999999999999998 679999999999999999755442222211111123334
Q ss_pred EEcCCC-CEEEEEECCCcEEEEeCCc
Q 008820 431 SLTAVQ-HTLVVSHESGSIKVWRNDK 455 (552)
Q Consensus 431 ~~s~~~-~~l~~g~~dg~i~iwd~~~ 455 (552)
++.|+- .+++.|+..+.+++||+-+
T Consensus 425 ~~~~~~a~~la~GG~k~~~~vwd~~~ 450 (463)
T KOG0270|consen 425 ALDPDVAFTLAFGGEKAVLRVWDIFT 450 (463)
T ss_pred ccCCCcceEEEecCccceEEEeeccc
Confidence 555553 4677788888899999643
No 119
>KOG0321 consensus WD40 repeat-containing protein L2DTL [Function unknown]
Probab=99.89 E-value=1.2e-21 Score=188.73 Aligned_cols=273 Identities=15% Similarity=0.132 Sum_probs=190.8
Q ss_pred CCEEEEEeCCCcEEEEeCCCCeE------EEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCccccccc
Q 008820 262 GGFLFSSSFDKSIHVWSLKDFSH------VHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWN 335 (552)
Q Consensus 262 ~~~l~s~s~dg~I~iwd~~~~~~------~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~ 335 (552)
...|+.+..||.|.++|...... +.....|...|.++.|.| ++..|++++.|.++++||+........- ...
T Consensus 64 eHiLavadE~G~i~l~dt~~~~fr~ee~~lk~~~aH~nAifDl~wap-ge~~lVsasGDsT~r~Wdvk~s~l~G~~-~~~ 141 (720)
T KOG0321|consen 64 EHILAVADEDGGIILFDTKSIVFRLEERQLKKPLAHKNAIFDLKWAP-GESLLVSASGDSTIRPWDVKTSRLVGGR-LNL 141 (720)
T ss_pred cceEEEecCCCceeeecchhhhcchhhhhhcccccccceeEeeccCC-CceeEEEccCCceeeeeeeccceeecce-eec
Confidence 56899999999999999865432 245567999999999999 8889999999999999999876543321 122
Q ss_pred cCCCceeeeEEEEeeC-CCEEEEeeCCCcEEEEECCCCc--------------------e-------eEEecCCCCC---
Q 008820 336 EEKDWRYSGIHALTTS-GRYLYTGSGDRTIKAWSLLDGT--------------------L-------SCTMSGHKSA--- 384 (552)
Q Consensus 336 ~~~~~~~~~~~~~~~~-~~~l~sgs~dg~i~iwd~~~~~--------------------~-------~~~~~~h~~~--- 384 (552)
+|.. ... ..||.+. ...|++|+.||.|.|||++-.. + +..-..+...
T Consensus 142 GH~~-Svk-S~cf~~~n~~vF~tGgRDg~illWD~R~n~~d~~e~~~~~~~~~~n~~ptpskp~~kr~~k~kA~s~ti~s 219 (720)
T KOG0321|consen 142 GHTG-SVK-SECFMPTNPAVFCTGGRDGEILLWDCRCNGVDALEEFDNRIYGRHNTAPTPSKPLKKRIRKWKAASNTIFS 219 (720)
T ss_pred cccc-ccc-hhhhccCCCcceeeccCCCcEEEEEEeccchhhHHHHhhhhhccccCCCCCCchhhccccccccccCceee
Confidence 2222 222 2356654 5599999999999999986321 0 0111223333
Q ss_pred -eEEEEEe-CCEEEEEeC-CCcEEEEECCCCceeEEEe------cCCC---CceEEEEEEcCCCCEEEEEECCCcEEEEe
Q 008820 385 -VSTLAVC-NGVLYSGSR-DGTIRLWSLSDHSLLTVLE------EDSS---GAVSSVLSLTAVQHTLVVSHESGSIKVWR 452 (552)
Q Consensus 385 -v~~l~~~-~~~l~s~~~-dg~i~iwd~~~~~~~~~~~------~~~~---~~~~~~~~~s~~~~~l~~g~~dg~i~iwd 452 (552)
|+.+.|- +..|++++. |+.|++||++......... .+.. ..-...+.....|.+|++.+.|+.|++|+
T Consensus 220 svTvv~fkDe~tlaSaga~D~~iKVWDLRk~~~~~r~ep~~~~~~~t~skrs~G~~nL~lDssGt~L~AsCtD~sIy~yn 299 (720)
T KOG0321|consen 220 SVTVVLFKDESTLASAGAADSTIKVWDLRKNYTAYRQEPRGSDKYPTHSKRSVGQVNLILDSSGTYLFASCTDNSIYFYN 299 (720)
T ss_pred eeEEEEEeccceeeeccCCCcceEEEeecccccccccCCCcccCccCcccceeeeEEEEecCCCCeEEEEecCCcEEEEe
Confidence 4556666 458998887 9999999998765432221 1111 11122255666788998888999999999
Q ss_pred CCc----ceeeeecccce---E-EEEEecCCEEEEEeCCCeEEEEecCCCeeeeeeccCCCcccCcceEEEEEeCC---e
Q 008820 453 NDK----FMKSMQTHKGS---V-FAVFLEGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQG---K 521 (552)
Q Consensus 453 ~~~----~~~~~~~h~~~---v-~~v~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~---~ 521 (552)
+.. ++..+.++... + .+++|++.++++|+.|...++|.+.+.+........ +...|++++|.+. .
T Consensus 300 m~s~s~sP~~~~sg~~~~sf~vks~lSpd~~~l~SgSsd~~ayiw~vs~~e~~~~~l~G----ht~eVt~V~w~pS~~t~ 375 (720)
T KOG0321|consen 300 MRSLSISPVAEFSGKLNSSFYVKSELSPDDCSLLSGSSDEQAYIWVVSSPEAPPALLLG----HTREVTTVRWLPSATTP 375 (720)
T ss_pred ccccCcCchhhccCcccceeeeeeecCCCCceEeccCCCcceeeeeecCccCChhhhhC----cceEEEEEeeccccCCC
Confidence 764 44445554332 2 245679999999999999999999876554433322 2566999999863 4
Q ss_pred EEEEeCCCeEEEEEecCCcce
Q 008820 522 LFVGCADRTVKIALCNRQIPE 542 (552)
Q Consensus 522 l~s~s~Dg~v~iw~~~~~~~~ 542 (552)
+++++.|..++||++.+...+
T Consensus 376 v~TcSdD~~~kiW~l~~~l~e 396 (720)
T KOG0321|consen 376 VATCSDDFRVKIWRLSNGLEE 396 (720)
T ss_pred ceeeccCcceEEEeccCchhh
Confidence 999999999999999755543
No 120
>KOG1036 consensus Mitotic spindle checkpoint protein BUB3, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning]
Probab=99.89 E-value=1.1e-20 Score=167.12 Aligned_cols=257 Identities=16% Similarity=0.211 Sum_probs=198.6
Q ss_pred CCCCccccceeeecCcceEEEeeCCCeEEEEEee--------cCccceEEEEEc-CCEEEEEeCCCcEEEEeCCCCeEEE
Q 008820 216 NSDGADIDQARAAGGVKDLVNGLSKGNVKFKDLQ--------GHRDCVTGLAVG-GGFLFSSSFDKSIHVWSLKDFSHVH 286 (552)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--------~H~~~V~~l~~s-~~~l~s~s~dg~I~iwd~~~~~~~~ 286 (552)
+++...|..+.+++..+.++.+++++..++++.. .|..++.+++|. ...+++|+.||.|+.+|+.++....
T Consensus 10 npP~d~IS~v~f~~~~~~LLvssWDgslrlYdv~~~~l~~~~~~~~plL~c~F~d~~~~~~G~~dg~vr~~Dln~~~~~~ 89 (323)
T KOG1036|consen 10 NPPEDGISSVKFSPSSSDLLVSSWDGSLRLYDVPANSLKLKFKHGAPLLDCAFADESTIVTGGLDGQVRRYDLNTGNEDQ 89 (323)
T ss_pred CCChhceeeEEEcCcCCcEEEEeccCcEEEEeccchhhhhheecCCceeeeeccCCceEEEeccCceEEEEEecCCccee
Confidence 3445568889999999999999999999999854 489999999999 8999999999999999999877654
Q ss_pred EEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEE
Q 008820 287 TFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKA 366 (552)
Q Consensus 287 ~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~i 366 (552)
+..|..+|.++.+++. ...+++|+.|++|++||.+...... .... ...+.+++..++.|++|+.|..+.+
T Consensus 90 -igth~~~i~ci~~~~~-~~~vIsgsWD~~ik~wD~R~~~~~~---~~d~-----~kkVy~~~v~g~~LvVg~~~r~v~i 159 (323)
T KOG1036|consen 90 -IGTHDEGIRCIEYSYE-VGCVISGSWDKTIKFWDPRNKVVVG---TFDQ-----GKKVYCMDVSGNRLVVGTSDRKVLI 159 (323)
T ss_pred -eccCCCceEEEEeecc-CCeEEEcccCccEEEEecccccccc---cccc-----CceEEEEeccCCEEEEeecCceEEE
Confidence 4569999999999974 4477999999999999998522211 1111 1257788999999999999999999
Q ss_pred EECCCCceeEEe--cCCCCCeEEEEEeC--CEEEEEeCCCcEEEEECCCC----ceeEEEecCCCC-------ceEEEEE
Q 008820 367 WSLLDGTLSCTM--SGHKSAVSTLAVCN--GVLYSGSRDGTIRLWSLSDH----SLLTVLEEDSSG-------AVSSVLS 431 (552)
Q Consensus 367 wd~~~~~~~~~~--~~h~~~v~~l~~~~--~~l~s~~~dg~i~iwd~~~~----~~~~~~~~~~~~-------~~~~~~~ 431 (552)
||+++.....+. ..-+-.+.|+++.+ .-.++++-||.|.+=.+... +....|+.|... .....++
T Consensus 160 yDLRn~~~~~q~reS~lkyqtR~v~~~pn~eGy~~sSieGRVavE~~d~s~~~~skkyaFkCHr~~~~~~~~~yPVNai~ 239 (323)
T KOG1036|consen 160 YDLRNLDEPFQRRESSLKYQTRCVALVPNGEGYVVSSIEGRVAVEYFDDSEEAQSKKYAFKCHRLSEKDTEIIYPVNAIA 239 (323)
T ss_pred EEcccccchhhhccccceeEEEEEEEecCCCceEEEeecceEEEEccCCchHHhhhceeEEeeecccCCceEEEEeceeE
Confidence 999976554322 22345678888874 46788899999988666654 334444443211 1122368
Q ss_pred EcCCCCEEEEEECCCcEEEEeCC--cceeeeecccceEEEEEe--cCCEEEEEeC
Q 008820 432 LTAVQHTLVVSHESGSIKVWRND--KFMKSMQTHKGSVFAVFL--EGKWLFTGGW 482 (552)
Q Consensus 432 ~s~~~~~l~~g~~dg~i~iwd~~--~~~~~~~~h~~~v~~v~~--~~~~l~sgs~ 482 (552)
|+|-...+++|+.||.|.+||.. +.+..+......|.+++| +|..||.++.
T Consensus 240 Fhp~~~tfaTgGsDG~V~~Wd~~~rKrl~q~~~~~~SI~slsfs~dG~~LAia~s 294 (323)
T KOG1036|consen 240 FHPIHGTFATGGSDGIVNIWDLFNRKRLKQLAKYETSISSLSFSMDGSLLAIASS 294 (323)
T ss_pred eccccceEEecCCCceEEEccCcchhhhhhccCCCCceEEEEeccCCCeEEEEec
Confidence 99999999999999999999954 556666666778888888 8999999874
No 121
>KOG0269 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.89 E-value=3.3e-22 Score=196.55 Aligned_cols=196 Identities=21% Similarity=0.385 Sum_probs=163.8
Q ss_pred eCCCEEEEeeCCCcEEEEECCC---CceeEEecCCCCCeEEEEEe---CCEEEEEeCCCcEEEEECCCCceeEEEecCCC
Q 008820 350 TSGRYLYTGSGDRTIKAWSLLD---GTLSCTMSGHKSAVSTLAVC---NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSS 423 (552)
Q Consensus 350 ~~~~~l~sgs~dg~i~iwd~~~---~~~~~~~~~h~~~v~~l~~~---~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~ 423 (552)
.+.++|++++..|.|.+||+.. .+.+..|..|+..++++.|+ +++|++||.||+|++||++..+...++... .
T Consensus 98 ~~~NlIAT~s~nG~i~vWdlnk~~rnk~l~~f~EH~Rs~~~ldfh~tep~iliSGSQDg~vK~~DlR~~~S~~t~~~n-S 176 (839)
T KOG0269|consen 98 LYSNLIATCSTNGVISVWDLNKSIRNKLLTVFNEHERSANKLDFHSTEPNILISGSQDGTVKCWDLRSKKSKSTFRSN-S 176 (839)
T ss_pred chhhhheeecCCCcEEEEecCccccchhhhHhhhhccceeeeeeccCCccEEEecCCCceEEEEeeeccccccccccc-c
Confidence 3567999999999999999986 55666888999999999999 679999999999999999999888888764 3
Q ss_pred CceEEEEEEcC-CCCEEEEEECCCcEEEEeCCc---ceeeeecccceEEEEEe--cCCEEEEEeCCCeEEEEecCCCeee
Q 008820 424 GAVSSVLSLTA-VQHTLVVSHESGSIKVWRNDK---FMKSMQTHKGSVFAVFL--EGKWLFTGGWDKTVSVQELAGDEFE 497 (552)
Q Consensus 424 ~~~~~~~~~s~-~~~~l~~g~~dg~i~iwd~~~---~~~~~~~h~~~v~~v~~--~~~~l~sgs~dg~i~iwd~~~~~~~ 497 (552)
..+.. +.|+| .+..++++.+.|.+++||+++ +...+..|.++|.++.| ++.+|||||.|+.|+|||+.+.+..
T Consensus 177 ESiRD-V~fsp~~~~~F~s~~dsG~lqlWDlRqp~r~~~k~~AH~GpV~c~nwhPnr~~lATGGRDK~vkiWd~t~~~~~ 255 (839)
T KOG0269|consen 177 ESIRD-VKFSPGYGNKFASIHDSGYLQLWDLRQPDRCEKKLTAHNGPVLCLNWHPNREWLATGGRDKMVKIWDMTDSRAK 255 (839)
T ss_pred hhhhc-eeeccCCCceEEEecCCceEEEeeccCchhHHHHhhcccCceEEEeecCCCceeeecCCCccEEEEeccCCCcc
Confidence 44455 46655 478899999999999999886 56678899999999987 8999999999999999999876443
Q ss_pred eeeccCCCcccCcceEEEEEeCCe---EEEEe--CCCeEEEEEecCCcceeEEEecccc
Q 008820 498 EDVIPTGAIPCGSVITALLYWQGK---LFVGC--ADRTVKIALCNRQIPEIFSLLLHIN 551 (552)
Q Consensus 498 ~~~~~~~~~~~~~~v~~l~~~~~~---l~s~s--~Dg~v~iw~~~~~~~~~~~~~gh~~ 551 (552)
.... +....+|..+.|-|.+ |++++ .|-.|+|||+.++..+...|..|++
T Consensus 256 ~~~t----InTiapv~rVkWRP~~~~hLAtcsmv~dtsV~VWDvrRPYIP~~t~~eH~~ 310 (839)
T KOG0269|consen 256 PKHT----INTIAPVGRVKWRPARSYHLATCSMVVDTSVHVWDVRRPYIPYATFLEHTD 310 (839)
T ss_pred ceeE----EeecceeeeeeeccCccchhhhhhccccceEEEEeeccccccceeeeccCc
Confidence 3222 2226779999999754 88766 5889999999999999999999875
No 122
>KOG1274 consensus WD40 repeat protein [General function prediction only]
Probab=99.89 E-value=9.1e-21 Score=189.98 Aligned_cols=255 Identities=18% Similarity=0.248 Sum_probs=202.4
Q ss_pred ecCccceEEEEEc--CCEEEEEeCCCcEEEEeCCCC-eEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCC
Q 008820 249 QGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDF-SHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFP 325 (552)
Q Consensus 249 ~~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~-~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~ 325 (552)
.+|...-+.++|. |.+|++++.||.|++|+..+. ....++..+...|.+++.. ...|++|+.+++|.+|.+..+
T Consensus 10 yaht~G~t~i~~d~~gefi~tcgsdg~ir~~~~~sd~e~P~ti~~~g~~v~~ia~~---s~~f~~~s~~~tv~~y~fps~ 86 (933)
T KOG1274|consen 10 YAHTGGLTLICYDPDGEFICTCGSDGDIRKWKTNSDEEEPETIDISGELVSSIACY---SNHFLTGSEQNTVLRYKFPSG 86 (933)
T ss_pred hhccCceEEEEEcCCCCEEEEecCCCceEEeecCCcccCCchhhccCceeEEEeec---ccceEEeeccceEEEeeCCCC
Confidence 4788889999998 999999999999999997665 4445555577888888763 347899999999999999987
Q ss_pred CCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe--CCEEEEEeCCCc
Q 008820 326 LGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC--NGVLYSGSRDGT 403 (552)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~ 403 (552)
.....+..+... ..+.+++.+|++++.||.|-.|++.++.+......+++|..+|.++.|+ +++|++.+.||.
T Consensus 87 ~~~~iL~Rftlp-----~r~~~v~g~g~~iaagsdD~~vK~~~~~D~s~~~~lrgh~apVl~l~~~p~~~fLAvss~dG~ 161 (933)
T KOG1274|consen 87 EEDTILARFTLP-----IRDLAVSGSGKMIAAGSDDTAVKLLNLDDSSQEKVLRGHDAPVLQLSYDPKGNFLAVSSCDGK 161 (933)
T ss_pred Cccceeeeeecc-----ceEEEEecCCcEEEeecCceeEEEEeccccchheeecccCCceeeeeEcCCCCEEEEEecCce
Confidence 766555554432 2356888899999999999999999999999999999999999999999 459999999999
Q ss_pred EEEEECCCCceeEEEecCC------CCceEEEEEEcCCCCEEEEEECCCcEEEEeCCcc--eeeee--cccceEEEEE--
Q 008820 404 IRLWSLSDHSLLTVLEEDS------SGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDKF--MKSMQ--THKGSVFAVF-- 471 (552)
Q Consensus 404 i~iwd~~~~~~~~~~~~~~------~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~~~--~~~~~--~h~~~v~~v~-- 471 (552)
|++||+.++.+..++..-. ...+.+..+|+|++..+++.+.|+.|++|+...- ...+. .+...+..+.
T Consensus 162 v~iw~~~~~~~~~tl~~v~k~n~~~~s~i~~~~aW~Pk~g~la~~~~d~~Vkvy~r~~we~~f~Lr~~~~ss~~~~~~ws 241 (933)
T KOG1274|consen 162 VQIWDLQDGILSKTLTGVDKDNEFILSRICTRLAWHPKGGTLAVPPVDNTVKVYSRKGWELQFKLRDKLSSSKFSDLQWS 241 (933)
T ss_pred EEEEEcccchhhhhcccCCccccccccceeeeeeecCCCCeEEeeccCCeEEEEccCCceeheeecccccccceEEEEEc
Confidence 9999999988776665321 1334556899999999999999999999986542 22222 2333355555
Q ss_pred ecCCEEEEEeCCCeEEEEecCCCeeeeeeccCCCcccCcceEEEEEeCC
Q 008820 472 LEGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQG 520 (552)
Q Consensus 472 ~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~ 520 (552)
|+|+|||+++.||.|.|||+++... +. ....|++++|.++
T Consensus 242 PnG~YiAAs~~~g~I~vWnv~t~~~------~~---~~~~Vc~~aw~p~ 281 (933)
T KOG1274|consen 242 PNGKYIAASTLDGQILVWNVDTHER------HE---FKRAVCCEAWKPN 281 (933)
T ss_pred CCCcEEeeeccCCcEEEEecccchh------cc---ccceeEEEecCCC
Confidence 4999999999999999999987221 11 1556889999863
No 123
>KOG0268 consensus Sof1-like rRNA processing protein (contains WD40 repeats) [RNA processing and modification]
Probab=99.89 E-value=5.1e-22 Score=178.88 Aligned_cols=249 Identities=16% Similarity=0.236 Sum_probs=184.1
Q ss_pred ceEEEeeCCCeEEEEE---------eecCccceEEEEEcCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEec
Q 008820 232 KDLVNGLSKGNVKFKD---------LQGHRDCVTGLAVGGGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVD 302 (552)
Q Consensus 232 ~~~~~~~~~~~~~~~~---------l~~H~~~V~~l~~s~~~l~s~s~dg~I~iwd~~~~~~~~~~~~h~~~v~~v~~~~ 302 (552)
..++++..||.+.+|+ |+.|.+.|..|++....+++++.|.+|+.|.++- .+++++.+ .+.+..+.-+.
T Consensus 80 s~~aSGs~DG~VkiWnlsqR~~~~~f~AH~G~V~Gi~v~~~~~~tvgdDKtvK~wk~~~-~p~~tilg-~s~~~gIdh~~ 157 (433)
T KOG0268|consen 80 STVASGSCDGEVKIWNLSQRECIRTFKAHEGLVRGICVTQTSFFTVGDDKTVKQWKIDG-PPLHTILG-KSVYLGIDHHR 157 (433)
T ss_pred hhhhccccCceEEEEehhhhhhhheeecccCceeeEEecccceEEecCCcceeeeeccC-Ccceeeec-ccccccccccc
Confidence 4566777888888887 5789999999999989999999999999999765 46777654 34566665444
Q ss_pred CCCCEEEEEcCCCcEEEEeCCCCCCCccccccccCCCceeeeEEEEeeCCC-EEEEeeCCCcEEEEECCCCceeEEecCC
Q 008820 303 EDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGR-YLYTGSGDRTIKAWSLLDGTLSCTMSGH 381 (552)
Q Consensus 303 ~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~sgs~dg~i~iwd~~~~~~~~~~~~h 381 (552)
....++||+ -.|.|||.........+.. ..+ ......++|... .|++|+.|+.|.+||++++++++.+. -
T Consensus 158 -~~~~FaTcG--e~i~IWD~~R~~Pv~smsw---G~D--ti~svkfNpvETsILas~~sDrsIvLyD~R~~~Pl~KVi-~ 228 (433)
T KOG0268|consen 158 -KNSVFATCG--EQIDIWDEQRDNPVSSMSW---GAD--SISSVKFNPVETSILASCASDRSIVLYDLRQASPLKKVI-L 228 (433)
T ss_pred -ccccccccC--ceeeecccccCCccceeec---CCC--ceeEEecCCCcchheeeeccCCceEEEecccCCccceee-e
Confidence 344667776 4689999875443332221 111 112234455433 88888899999999999999988765 2
Q ss_pred CCCeEEEEEeCC--EEEEEeCCCcEEEEECCCCc-eeEEEecCCCCceEEEEEEcCCCCEEEEEECCCcEEEEeCCccee
Q 008820 382 KSAVSTLAVCNG--VLYSGSRDGTIRLWSLSDHS-LLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDKFMK 458 (552)
Q Consensus 382 ~~~v~~l~~~~~--~l~s~~~dg~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~~~~~ 458 (552)
...-+.++|+++ .+++|++|..++.||++... ++.....| ...+.. +.|+|.|.-+++|+.|.+|+||..+..-.
T Consensus 229 ~mRTN~IswnPeafnF~~a~ED~nlY~~DmR~l~~p~~v~~dh-vsAV~d-VdfsptG~EfvsgsyDksIRIf~~~~~~S 306 (433)
T KOG0268|consen 229 TMRTNTICWNPEAFNFVAANEDHNLYTYDMRNLSRPLNVHKDH-VSAVMD-VDFSPTGQEFVSGSYDKSIRIFPVNHGHS 306 (433)
T ss_pred eccccceecCccccceeeccccccceehhhhhhcccchhhccc-ceeEEE-eccCCCcchhccccccceEEEeecCCCcc
Confidence 344578999954 78899999999999998765 45555544 444555 58999999999999999999998664332
Q ss_pred eeecc---cceEEEEEe--cCCEEEEEeCCCeEEEEecCC
Q 008820 459 SMQTH---KGSVFAVFL--EGKWLFTGGWDKTVSVQELAG 493 (552)
Q Consensus 459 ~~~~h---~~~v~~v~~--~~~~l~sgs~dg~i~iwd~~~ 493 (552)
.-..| ...|.++.| |.+++++||.|+.|++|....
T Consensus 307 RdiYhtkRMq~V~~Vk~S~Dskyi~SGSdd~nvRlWka~A 346 (433)
T KOG0268|consen 307 RDIYHTKRMQHVFCVKYSMDSKYIISGSDDGNVRLWKAKA 346 (433)
T ss_pred hhhhhHhhhheeeEEEEeccccEEEecCCCcceeeeecch
Confidence 22223 356888887 999999999999999998754
No 124
>KOG0650 consensus WD40 repeat nucleolar protein Bop1, involved in ribosome biogenesis [Translation, ribosomal structure and biogenesis]
Probab=99.88 E-value=1.1e-20 Score=180.56 Aligned_cols=286 Identities=19% Similarity=0.240 Sum_probs=207.6
Q ss_pred EEEeecCccceEEEEEc--CCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeC
Q 008820 245 FKDLQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSF 322 (552)
Q Consensus 245 ~~~l~~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~ 322 (552)
-..+.||++.|.+|... |.+|++|+.||+||||.+.+|++++++. ..+.|.+|+|+|....-+++...+..+.+-+-
T Consensus 393 ~lvyrGHtg~Vr~iSvdp~G~wlasGsdDGtvriWEi~TgRcvr~~~-~d~~I~~vaw~P~~~~~vLAvA~~~~~~ivnp 471 (733)
T KOG0650|consen 393 ALVYRGHTGLVRSISVDPSGEWLASGSDDGTVRIWEIATGRCVRTVQ-FDSEIRSVAWNPLSDLCVLAVAVGECVLIVNP 471 (733)
T ss_pred eeeEeccCCeEEEEEecCCcceeeecCCCCcEEEEEeecceEEEEEe-ecceeEEEEecCCCCceeEEEEecCceEEeCc
Confidence 34578999999999998 9999999999999999999999999987 55789999999987766666666666666654
Q ss_pred CCCCCC------cc-------------ccccccC----CC-c------eeeeEE--EEeeCCCEEEEeeCC---CcEEEE
Q 008820 323 SFPLGH------EP-------------LKKWNEE----KD-W------RYSGIH--ALTTSGRYLYTGSGD---RTIKAW 367 (552)
Q Consensus 323 ~~~~~~------~~-------------~~~~~~~----~~-~------~~~~~~--~~~~~~~~l~sgs~d---g~i~iw 367 (552)
.-+... .. +..|... .. . +...+. .++..|++|++...+ ..|.|.
T Consensus 472 ~~G~~~e~~~t~ell~~~~~~~~p~~~~~~W~~~~~~e~~~~v~~~I~~~k~i~~vtWHrkGDYlatV~~~~~~~~VliH 551 (733)
T KOG0650|consen 472 IFGDRLEVGPTKELLASAPNESEPDAAVVTWSRASLDELEKGVCIVIKHPKSIRQVTWHRKGDYLATVMPDSGNKSVLIH 551 (733)
T ss_pred cccchhhhcchhhhhhcCCCccCCcccceeechhhhhhhccceEEEEecCCccceeeeecCCceEEEeccCCCcceEEEE
Confidence 322100 00 0111111 00 0 001122 344567799887654 578899
Q ss_pred ECCCCceeEEecCCCCCeEEEEEeCC--EEEEEeCCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEECC
Q 008820 368 SLLDGTLSCTMSGHKSAVSTLAVCNG--VLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHES 445 (552)
Q Consensus 368 d~~~~~~~~~~~~h~~~v~~l~~~~~--~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~d 445 (552)
++........|....+.|.++.|++. +|++++ ...|++||+.....+..+... ....+.++++|.|..|+.|+.|
T Consensus 552 QLSK~~sQ~PF~kskG~vq~v~FHPs~p~lfVaT-q~~vRiYdL~kqelvKkL~tg--~kwiS~msihp~GDnli~gs~d 628 (733)
T KOG0650|consen 552 QLSKRKSQSPFRKSKGLVQRVKFHPSKPYLFVAT-QRSVRIYDLSKQELVKKLLTG--SKWISSMSIHPNGDNLILGSYD 628 (733)
T ss_pred ecccccccCchhhcCCceeEEEecCCCceEEEEe-ccceEEEehhHHHHHHHHhcC--CeeeeeeeecCCCCeEEEecCC
Confidence 99877777777767788999999944 666555 468999999987777666543 3344558999999999999999
Q ss_pred CcEEEEeCC---cceeeeecccceEEEEEecC--CEEEEEeCCCeEEEEe------cCCCeeeeeec-cC-CCcccCcce
Q 008820 446 GSIKVWRND---KFMKSMQTHKGSVFAVFLEG--KWLFTGGWDKTVSVQE------LAGDEFEEDVI-PT-GAIPCGSVI 512 (552)
Q Consensus 446 g~i~iwd~~---~~~~~~~~h~~~v~~v~~~~--~~l~sgs~dg~i~iwd------~~~~~~~~~~~-~~-~~~~~~~~v 512 (552)
+.+..+|+. ++.+.+..|...++++++.. .++++|+.||++.||- +..+.+..... .. +.......|
T Consensus 629 ~k~~WfDldlsskPyk~lr~H~~avr~Va~H~ryPLfas~sdDgtv~Vfhg~VY~Dl~qnpliVPlK~L~gH~~~~~~gV 708 (733)
T KOG0650|consen 629 KKMCWFDLDLSSKPYKTLRLHEKAVRSVAFHKRYPLFASGSDDGTVIVFHGMVYNDLLQNPLIVPLKRLRGHEKTNDLGV 708 (733)
T ss_pred CeeEEEEcccCcchhHHhhhhhhhhhhhhhccccceeeeecCCCcEEEEeeeeehhhhcCCceEeeeeccCceeecccce
Confidence 999999954 68889999999999999854 5799999999999984 32222222211 11 111224458
Q ss_pred EEEEEeCCe--EEEEeCCCeEEEE
Q 008820 513 TALLYWQGK--LFVGCADRTVKIA 534 (552)
Q Consensus 513 ~~l~~~~~~--l~s~s~Dg~v~iw 534 (552)
....|+|.. |++++.||+|++|
T Consensus 709 Ld~~wHP~qpWLfsAGAd~tirlf 732 (733)
T KOG0650|consen 709 LDTIWHPRQPWLFSAGADGTIRLF 732 (733)
T ss_pred EeecccCCCceEEecCCCceEEee
Confidence 888999865 9999999999998
No 125
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=99.88 E-value=3.2e-19 Score=172.76 Aligned_cols=269 Identities=16% Similarity=0.152 Sum_probs=188.0
Q ss_pred CCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCccccccccCCCce
Q 008820 262 GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWR 341 (552)
Q Consensus 262 ~~~l~s~s~dg~I~iwd~~~~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~ 341 (552)
++.++|++.|+.|++||+.+++.+..+..+.. +.+++|+|++..++++++.++.|++||..+++....+. ....
T Consensus 1 ~~~~~s~~~d~~v~~~d~~t~~~~~~~~~~~~-~~~l~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~---~~~~-- 74 (300)
T TIGR03866 1 EKAYVSNEKDNTISVIDTATLEVTRTFPVGQR-PRGITLSKDGKLLYVCASDSDTIQVIDLATGEVIGTLP---SGPD-- 74 (300)
T ss_pred CcEEEEecCCCEEEEEECCCCceEEEEECCCC-CCceEECCCCCEEEEEECCCCeEEEEECCCCcEEEecc---CCCC--
Confidence 46789999999999999999999998886644 67899999887666788899999999998764332222 1111
Q ss_pred eeeEEEEeeCCCEEEE-eeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe-C-CEEEEEeCCC-cEEEEECCCCceeEE
Q 008820 342 YSGIHALTTSGRYLYT-GSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC-N-GVLYSGSRDG-TIRLWSLSDHSLLTV 417 (552)
Q Consensus 342 ~~~~~~~~~~~~~l~s-gs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~-~-~~l~s~~~dg-~i~iwd~~~~~~~~~ 417 (552)
.....++++++.+++ ++.|+.|++||+.+++.+..+.. ...+.+++|+ + ..+++++.++ .+..||..+++....
T Consensus 75 -~~~~~~~~~g~~l~~~~~~~~~l~~~d~~~~~~~~~~~~-~~~~~~~~~~~dg~~l~~~~~~~~~~~~~d~~~~~~~~~ 152 (300)
T TIGR03866 75 -PELFALHPNGKILYIANEDDNLVTVIDIETRKVLAEIPV-GVEPEGMAVSPDGKIVVNTSETTNMAHFIDTKTYEIVDN 152 (300)
T ss_pred -ccEEEECCCCCEEEEEcCCCCeEEEEECCCCeEEeEeeC-CCCcceEEECCCCCEEEEEecCCCeEEEEeCCCCeEEEE
Confidence 123468888886654 55689999999999888777763 3346788998 3 3777777665 577889988877665
Q ss_pred EecCCCCceEEEEEEcCCCCEEEEE-ECCCcEEEEeCCc--ceeeeeccc-----ce--E--EEEEecCCEEEE-EeCCC
Q 008820 418 LEEDSSGAVSSVLSLTAVQHTLVVS-HESGSIKVWRNDK--FMKSMQTHK-----GS--V--FAVFLEGKWLFT-GGWDK 484 (552)
Q Consensus 418 ~~~~~~~~~~~~~~~s~~~~~l~~g-~~dg~i~iwd~~~--~~~~~~~h~-----~~--v--~~v~~~~~~l~s-gs~dg 484 (552)
..... ... .+.|++++++++++ ..++.|++||..+ ....+..+. .. . ..+++++++++. .+.++
T Consensus 153 ~~~~~--~~~-~~~~s~dg~~l~~~~~~~~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~~~~~~~~~~ 229 (300)
T TIGR03866 153 VLVDQ--RPR-FAEFTADGKELWVSSEIGGTVSVIDVATRKVIKKITFEIPGVHPEAVQPVGIKLTKDGKTAFVALGPAN 229 (300)
T ss_pred EEcCC--Ccc-EEEECCCCCEEEEEcCCCCEEEEEEcCcceeeeeeeecccccccccCCccceEECCCCCEEEEEcCCCC
Confidence 54332 122 36899999988655 4689999999764 333333221 11 1 223458887554 45567
Q ss_pred eEEEEecCCCeeeeeeccCCCcccCcceEEEEEeC--CeEEEE-eCCCeEEEEEecCCcceeEEEec
Q 008820 485 TVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQ--GKLFVG-CADRTVKIALCNRQIPEIFSLLL 548 (552)
Q Consensus 485 ~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~~--~~l~s~-s~Dg~v~iw~~~~~~~~~~~~~g 548 (552)
.+.+||+.+.+....... ...+.+++|+| ..|+++ +.+|.|++||+. +...+.++..
T Consensus 230 ~i~v~d~~~~~~~~~~~~------~~~~~~~~~~~~g~~l~~~~~~~~~i~v~d~~-~~~~~~~~~~ 289 (300)
T TIGR03866 230 RVAVVDAKTYEVLDYLLV------GQRVWQLAFTPDEKYLLTTNGVSNDVSVIDVA-ALKVIKSIKV 289 (300)
T ss_pred eEEEEECCCCcEEEEEEe------CCCcceEEECCCCCEEEEEcCCCCeEEEEECC-CCcEEEEEEc
Confidence 899999988766544322 33577899985 346665 569999999998 4555555543
No 126
>KOG0973 consensus Histone transcription regulator HIRA, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.87 E-value=4.5e-20 Score=188.83 Aligned_cols=269 Identities=20% Similarity=0.284 Sum_probs=205.7
Q ss_pred CCccccceeeecCcceEEEee--CCCeEEEEE---------------------eecCccceEEEEEc--CCEEEEEeCCC
Q 008820 218 DGADIDQARAAGGVKDLVNGL--SKGNVKFKD---------------------LQGHRDCVTGLAVG--GGFLFSSSFDK 272 (552)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~---------------------l~~H~~~V~~l~~s--~~~l~s~s~dg 272 (552)
.+..+.++...+++..++++. .++++.+|. +..|.+.|+|+.|+ |++||+||.|+
T Consensus 12 ~~~~IfSIdv~pdg~~~aTgGq~~d~~~~iW~~~~vl~~~~~~~~~l~k~l~~m~~h~~sv~CVR~S~dG~~lAsGSDD~ 91 (942)
T KOG0973|consen 12 NEKSIFSIDVHPDGVKFATGGQVLDGGIVIWSQDPVLDEKEEKNENLPKHLCTMDDHDGSVNCVRFSPDGSYLASGSDDR 91 (942)
T ss_pred CCeeEEEEEecCCceeEecCCccccccceeeccccccchhhhhhcccchhheeeccccCceeEEEECCCCCeEeeccCcc
Confidence 334477888888888888888 676666776 35699999999999 99999999999
Q ss_pred cEEEEeCCC------------------CeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCcccccc
Q 008820 273 SIHVWSLKD------------------FSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKW 334 (552)
Q Consensus 273 ~I~iwd~~~------------------~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~ 334 (552)
.|.||+... .+++..+.+|...|.+++|+|++ .++++++.|++|.+||..+.. .+..+
T Consensus 92 ~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp~~-~~lvS~s~DnsViiwn~~tF~---~~~vl 167 (942)
T KOG0973|consen 92 LVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSPDD-SLLVSVSLDNSVIIWNAKTFE---LLKVL 167 (942)
T ss_pred eEEEeeecccCCcccccccccccccceeeEEEEEecCCCccceeccCCCc-cEEEEecccceEEEEccccce---eeeee
Confidence 999998762 24678889999999999999954 588999999999999998763 33344
Q ss_pred ccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCceeEEecCCC------CCeEEEEEe-CC-EEEEEe----CCC
Q 008820 335 NEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHK------SAVSTLAVC-NG-VLYSGS----RDG 402 (552)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~------~~v~~l~~~-~~-~l~s~~----~dg 402 (552)
..|... +. -..|.|-|++|++-+.|++|++|+..+....+.+.++- ....-+.|+ ++ +|++.. .-.
T Consensus 168 ~~H~s~-VK-Gvs~DP~Gky~ASqsdDrtikvwrt~dw~i~k~It~pf~~~~~~T~f~RlSWSPDG~~las~nA~n~~~~ 245 (942)
T KOG0973|consen 168 RGHQSL-VK-GVSWDPIGKYFASQSDDRTLKVWRTSDWGIEKSITKPFEESPLTTFFLRLSWSPDGHHLASPNAVNGGKS 245 (942)
T ss_pred eccccc-cc-ceEECCccCeeeeecCCceEEEEEcccceeeEeeccchhhCCCcceeeecccCCCcCeecchhhccCCcc
Confidence 444332 11 23678889999999999999999988777777765443 345778888 44 776653 345
Q ss_pred cEEEEECCCCceeEEEecCCCCceEEEEEEcCC-------------CC----EEEEEECCCcEEEEeCCcc--e-eeeec
Q 008820 403 TIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAV-------------QH----TLVVSHESGSIKVWRNDKF--M-KSMQT 462 (552)
Q Consensus 403 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~-------------~~----~l~~g~~dg~i~iwd~~~~--~-~~~~~ 462 (552)
++.|.+-.+.+.-..+-+|.. .+. ++.|+|. .+ .+|+|+.|++|.||....+ + ....-
T Consensus 246 ~~~IieR~tWk~~~~LvGH~~-p~e-vvrFnP~lfe~~~~ng~~~~~~~~y~i~AvgSqDrSlSVW~T~~~RPl~vi~~l 323 (942)
T KOG0973|consen 246 TIAIIERGTWKVDKDLVGHSA-PVE-VVRFNPKLFERNNKNGTSTQPNCYYCIAAVGSQDRSLSVWNTALPRPLFVIHNL 323 (942)
T ss_pred eeEEEecCCceeeeeeecCCC-ceE-EEEeChHHhccccccCCccCCCcceEEEEEecCCccEEEEecCCCCchhhhhhh
Confidence 688888777777777777754 443 3677652 11 6889999999999996432 2 22233
Q ss_pred ccceEEEEEe--cCCEEEEEeCCCeEEEEecCCC
Q 008820 463 HKGSVFAVFL--EGKWLFTGGWDKTVSVQELAGD 494 (552)
Q Consensus 463 h~~~v~~v~~--~~~~l~sgs~dg~i~iwd~~~~ 494 (552)
...+|..++| ||..|+.+|.||+|.++.++..
T Consensus 324 f~~SI~DmsWspdG~~LfacS~DGtV~~i~Fee~ 357 (942)
T KOG0973|consen 324 FNKSIVDMSWSPDGFSLFACSLDGTVALIHFEEK 357 (942)
T ss_pred hcCceeeeeEcCCCCeEEEEecCCeEEEEEcchH
Confidence 4678999888 8999999999999999988754
No 127
>KOG2445 consensus Nuclear pore complex component (sc Seh1) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.87 E-value=6.8e-20 Score=161.97 Aligned_cols=239 Identities=17% Similarity=0.318 Sum_probs=172.9
Q ss_pred ecCccceEEEEEc--CCEEEEEeCCCcEEEEeCCC----CeEEEEEeCCCCCeEEEEEe-cCCCCEEEEEcCCCcEEEEe
Q 008820 249 QGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKD----FSHVHTFKGHDHKVMAVVYV-DEDQPLCISGDSGGGIFVWS 321 (552)
Q Consensus 249 ~~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~----~~~~~~~~~h~~~v~~v~~~-~~~~~~l~s~~~dg~i~vwd 321 (552)
.+|.+-|+++.|+ |+++|||+.|++|+|||.++ ..+....+.|.+.|..|.|. |.-+..+++++.|+++.||.
T Consensus 10 s~h~DlihdVs~D~~GRRmAtCSsDq~vkI~d~~~~s~~W~~Ts~Wrah~~Si~rV~WAhPEfGqvvA~cS~Drtv~iWE 89 (361)
T KOG2445|consen 10 SGHKDLIHDVSFDFYGRRMATCSSDQTVKIWDSTSDSGTWSCTSSWRAHDGSIWRVVWAHPEFGQVVATCSYDRTVSIWE 89 (361)
T ss_pred cCCcceeeeeeecccCceeeeccCCCcEEEEeccCCCCceEEeeeEEecCCcEEEEEecCccccceEEEEecCCceeeee
Confidence 4799999999998 99999999999999999643 35667788999999999996 45577999999999999998
Q ss_pred CCCCCCCcc------ccccccCCCceeeeEEEEeeC--CCEEEEeeCCCcEEEEECCCC------ceeEEec-------C
Q 008820 322 FSFPLGHEP------LKKWNEEKDWRYSGIHALTTS--GRYLYTGSGDRTIKAWSLLDG------TLSCTMS-------G 380 (552)
Q Consensus 322 ~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~--~~~l~sgs~dg~i~iwd~~~~------~~~~~~~-------~ 380 (552)
-........ ...+..... ... -..|.|. |-.+++++.||.++||+.-.. .+...+. .
T Consensus 90 E~~~~~~~~~~~Wv~~ttl~Dsrs-sV~-DV~FaP~hlGLklA~~~aDG~lRIYEA~dp~nLs~W~Lq~Ei~~~~~pp~~ 167 (361)
T KOG2445|consen 90 EQEKSEEAHGRRWVRRTTLVDSRS-SVT-DVKFAPKHLGLKLAAASADGILRIYEAPDPMNLSQWTLQHEIQNVIDPPGK 167 (361)
T ss_pred ecccccccccceeEEEEEeecCCc-cee-EEEecchhcceEEEEeccCcEEEEEecCCccccccchhhhhhhhccCCccc
Confidence 642211111 111111111 111 1244443 558999999999999987543 2222222 4
Q ss_pred CCCCeEEEEEe-----CCEEEEEeCC-----CcEEEEECCCCc----eeEEEecCCCCceEEEEEEcCCC----CEEEEE
Q 008820 381 HKSAVSTLAVC-----NGVLYSGSRD-----GTIRLWSLSDHS----LLTVLEEDSSGAVSSVLSLTAVQ----HTLVVS 442 (552)
Q Consensus 381 h~~~v~~l~~~-----~~~l~s~~~d-----g~i~iwd~~~~~----~~~~~~~~~~~~~~~~~~~s~~~----~~l~~g 442 (552)
+..+..|+.|+ ..+|+.|+.+ +.++||....+. .+..+. .+...+.. ++|.|+- ..|+++
T Consensus 168 ~~~~~~CvsWn~sr~~~p~iAvgs~e~a~~~~~~~Iye~~e~~rKw~kva~L~-d~~dpI~d-i~wAPn~Gr~y~~lAvA 245 (361)
T KOG2445|consen 168 NKQPCFCVSWNPSRMHEPLIAVGSDEDAPHLNKVKIYEYNENGRKWLKVAELP-DHTDPIRD-ISWAPNIGRSYHLLAVA 245 (361)
T ss_pred ccCcceEEeeccccccCceEEEEcccCCccccceEEEEecCCcceeeeehhcC-CCCCccee-eeeccccCCceeeEEEe
Confidence 66778899998 2377777766 478888775433 233344 33455665 6888863 579999
Q ss_pred ECCCcEEEEeCCc----------------------ceeeeecccceEEEEEe--cCCEEEEEeCCCeEEEEecC
Q 008820 443 HESGSIKVWRNDK----------------------FMKSMQTHKGSVFAVFL--EGKWLFTGGWDKTVSVQELA 492 (552)
Q Consensus 443 ~~dg~i~iwd~~~----------------------~~~~~~~h~~~v~~v~~--~~~~l~sgs~dg~i~iwd~~ 492 (552)
+.|| |+||.++. .+..+..|.+.|..+.| .|..|++.|.||.||+|...
T Consensus 246 ~kDg-v~I~~v~~~~s~i~~ee~~~~~~~~~l~v~~vs~~~~H~~~VWrv~wNmtGtiLsStGdDG~VRLWkan 318 (361)
T KOG2445|consen 246 TKDG-VRIFKVKVARSAIEEEEVLAPDLMTDLPVEKVSELDDHNGEVWRVRWNMTGTILSSTGDDGCVRLWKAN 318 (361)
T ss_pred ecCc-EEEEEEeeccchhhhhcccCCCCccccceEEeeeccCCCCceEEEEEeeeeeEEeecCCCceeeehhhh
Confidence 9999 99998541 23456789999999998 79999999999999999764
No 128
>KOG0302 consensus Ribosome Assembly protein [General function prediction only]
Probab=99.87 E-value=2e-20 Score=169.58 Aligned_cols=232 Identities=19% Similarity=0.322 Sum_probs=165.7
Q ss_pred eecCccceEEEEEc----CCEEEEEeCCCcEEEEeCCC----------------CeEEEEEeCCCCCeEEEEEecCCCCE
Q 008820 248 LQGHRDCVTGLAVG----GGFLFSSSFDKSIHVWSLKD----------------FSHVHTFKGHDHKVMAVVYVDEDQPL 307 (552)
Q Consensus 248 l~~H~~~V~~l~~s----~~~l~s~s~dg~I~iwd~~~----------------~~~~~~~~~h~~~v~~v~~~~~~~~~ 307 (552)
..+|.+.|+.+..+ ..+.++=+..|.|+|||+.. .+++.++.+|...=++++|+|-...
T Consensus 147 ~i~h~g~~NRvr~~~~~~~~~~aswse~G~V~Vw~l~~~l~~l~~~~~~~~~s~~~Pl~t~~ghk~EGy~LdWSp~~~g- 225 (440)
T KOG0302|consen 147 SIPHYGGINRVRVSRLGNEVLCASWSENGRVQVWDLAPHLNALSEPGLEVKDSEFRPLFTFNGHKGEGYGLDWSPIKTG- 225 (440)
T ss_pred ccccccccceeeecccCCcceeeeecccCcEEEEEchhhhhhhcCccccccccccCceEEecccCccceeeeccccccc-
Confidence 34677777777666 45566667889999999742 2445556666666666666653222
Q ss_pred EEEEcCCCcEEEEeCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCcee---EEecCCCCC
Q 008820 308 CISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLS---CTMSGHKSA 384 (552)
Q Consensus 308 l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~---~~~~~h~~~ 384 (552)
.+++|..-+.|++|...++.-. ..+.+|+..
T Consensus 226 ----------------------------------------------~LlsGDc~~~I~lw~~~~g~W~vd~~Pf~gH~~S 259 (440)
T KOG0302|consen 226 ----------------------------------------------RLLSGDCVKGIHLWEPSTGSWKVDQRPFTGHTKS 259 (440)
T ss_pred ----------------------------------------------ccccCccccceEeeeeccCceeecCccccccccc
Confidence 3455555556666666554322 245679999
Q ss_pred eEEEEEe---CCEEEEEeCCCcEEEEECCCCce---eEEEecCCCCceEEEEEEcCCCCEEEEEECCCcEEEEeCC----
Q 008820 385 VSTLAVC---NGVLYSGSRDGTIRLWSLSDHSL---LTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRND---- 454 (552)
Q Consensus 385 v~~l~~~---~~~l~s~~~dg~i~iwd~~~~~~---~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~---- 454 (552)
|-.++|+ ++.|++||.||+|+|||+|.+.. +.+ +.+ .+- ..+++|+.+..+|++|+.||+++|||++
T Consensus 260 VEDLqWSptE~~vfaScS~DgsIrIWDiRs~~~~~~~~~-kAh-~sD-VNVISWnr~~~lLasG~DdGt~~iwDLR~~~~ 336 (440)
T KOG0302|consen 260 VEDLQWSPTEDGVFASCSCDGSIRIWDIRSGPKKAAVST-KAH-NSD-VNVISWNRREPLLASGGDDGTLSIWDLRQFKS 336 (440)
T ss_pred hhhhccCCccCceEEeeecCceEEEEEecCCCccceeEe-ecc-CCc-eeeEEccCCcceeeecCCCceEEEEEhhhccC
Confidence 9999998 56999999999999999999843 333 333 333 4457999888899999999999999976
Q ss_pred -cceeeeecccceEEEEEe---cCCEEEEEeCCCeEEEEecCCCee--------e---------eeeccCCCcccCcceE
Q 008820 455 -KFMKSMQTHKGSVFAVFL---EGKWLFTGGWDKTVSVQELAGDEF--------E---------EDVIPTGAIPCGSVIT 513 (552)
Q Consensus 455 -~~~~~~~~h~~~v~~v~~---~~~~l~sgs~dg~i~iwd~~~~~~--------~---------~~~~~~~~~~~~~~v~ 513 (552)
+++..++.|..+|+++.| +...|+++|.|..|.+||+.-..- . ..+.+ .....+.
T Consensus 337 ~~pVA~fk~Hk~pItsieW~p~e~s~iaasg~D~QitiWDlsvE~D~ee~~~~a~~~L~dlPpQLLFVH----qGQke~K 412 (440)
T KOG0302|consen 337 GQPVATFKYHKAPITSIEWHPHEDSVIAASGEDNQITIWDLSVEADEEEIDQEAAEGLQDLPPQLLFVH----QGQKEVK 412 (440)
T ss_pred CCcceeEEeccCCeeEEEeccccCceEEeccCCCcEEEEEeeccCChhhhccccccchhcCCceeEEEe----cchhHhh
Confidence 477899999999999998 478899999999999999863211 0 01111 1244577
Q ss_pred EEEEe---CCeEEEEeCCCeEEEE
Q 008820 514 ALLYW---QGKLFVGCADRTVKIA 534 (552)
Q Consensus 514 ~l~~~---~~~l~s~s~Dg~v~iw 534 (552)
.+.|+ |+.+++.+.||. .||
T Consensus 413 evhWH~QiPG~lvsTa~dGf-nVf 435 (440)
T KOG0302|consen 413 EVHWHRQIPGLLVSTAIDGF-NVF 435 (440)
T ss_pred hheeccCCCCeEEEecccce-eEE
Confidence 78888 578999999984 444
No 129
>KOG4328 consensus WD40 protein [Function unknown]
Probab=99.86 E-value=5.8e-20 Score=170.61 Aligned_cols=283 Identities=14% Similarity=0.165 Sum_probs=201.2
Q ss_pred EeecCccceEEEEEc---C-CEEEEEeCCCcEEEEeCCC----CeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEE
Q 008820 247 DLQGHRDCVTGLAVG---G-GFLFSSSFDKSIHVWSLKD----FSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIF 318 (552)
Q Consensus 247 ~l~~H~~~V~~l~~s---~-~~l~s~s~dg~I~iwd~~~----~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~ 318 (552)
..+-|.+.|++++|+ . +++++|+.-|.|-+||+.+ ..-+..+..|..+|.++.|+|.+...+++.|.||+|+
T Consensus 181 v~kv~~~Rit~l~fHPt~~~~lva~GdK~G~VG~Wn~~~~~~d~d~v~~f~~hs~~Vs~l~F~P~n~s~i~ssSyDGtiR 260 (498)
T KOG4328|consen 181 VAKVTDRRITSLAFHPTENRKLVAVGDKGGQVGLWNFGTQEKDKDGVYLFTPHSGPVSGLKFSPANTSQIYSSSYDGTIR 260 (498)
T ss_pred eeEecccceEEEEecccCcceEEEEccCCCcEEEEecCCCCCccCceEEeccCCccccceEecCCChhheeeeccCceee
Confidence 356788999999999 3 7899999999999999952 2335667889999999999999999999999999999
Q ss_pred EEeCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCce-eEEecCCCCCeEEEEEe---CCE
Q 008820 319 VWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTL-SCTMSGHKSAVSTLAVC---NGV 394 (552)
Q Consensus 319 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~-~~~~~~h~~~v~~l~~~---~~~ 394 (552)
+-|++..........- ..........++.+...++.|..=|...+||.+++.. ...+.-|...|++|+++ +.+
T Consensus 261 ~~D~~~~i~e~v~s~~---~d~~~fs~~d~~~e~~~vl~~~~~G~f~~iD~R~~~s~~~~~~lh~kKI~sv~~NP~~p~~ 337 (498)
T KOG4328|consen 261 LQDFEGNISEEVLSLD---TDNIWFSSLDFSAESRSVLFGDNVGNFNVIDLRTDGSEYENLRLHKKKITSVALNPVCPWF 337 (498)
T ss_pred eeeecchhhHHHhhcC---ccceeeeeccccCCCccEEEeecccceEEEEeecCCccchhhhhhhcccceeecCCCCchh
Confidence 9999865332222211 1112222334455555677777777999999997655 66677799999999999 459
Q ss_pred EEEEeCCCcEEEEECCCCceeE---EEecCCCCceEEEEEEcCCCCEEEEEECCCcEEEEeCC----c--ceeeeecccc
Q 008820 395 LYSGSRDGTIRLWSLSDHSLLT---VLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRND----K--FMKSMQTHKG 465 (552)
Q Consensus 395 l~s~~~dg~i~iwd~~~~~~~~---~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~----~--~~~~~~~h~~ 465 (552)
++++|.|++.+|||+|.-.... .....|...+.+ ..|||.+..|++.+.|..|+|||.. . +...+ .|..
T Consensus 338 laT~s~D~T~kIWD~R~l~~K~sp~lst~~HrrsV~s-AyFSPs~gtl~TT~~D~~IRv~dss~~sa~~~p~~~I-~Hn~ 415 (498)
T KOG4328|consen 338 LATASLDQTAKIWDLRQLRGKASPFLSTLPHRRSVNS-AYFSPSGGTLLTTCQDNEIRVFDSSCISAKDEPLGTI-PHNN 415 (498)
T ss_pred eeecccCcceeeeehhhhcCCCCcceecccccceeee-eEEcCCCCceEeeccCCceEEeecccccccCCcccee-eccC
Confidence 9999999999999998743322 122233444555 6999999889999999999999963 1 22222 2221
Q ss_pred ----eEEE----EEecCCEEEEEeCCCeEEEEecCCCeeeeeeccCCCcccCcceEEEEEeC--CeEEE-EeCCCeEEEE
Q 008820 466 ----SVFA----VFLEGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQ--GKLFV-GCADRTVKIA 534 (552)
Q Consensus 466 ----~v~~----v~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~~--~~l~s-~s~Dg~v~iw 534 (552)
+++- ..|+..++++|-.-..|-|+|-..++....+..... .....-..|+| +.+++ ++..|.|+||
T Consensus 416 ~t~RwlT~fKA~W~P~~~li~vg~~~r~IDv~~~~~~q~v~el~~P~~---~tI~~vn~~HP~~~~~~aG~~s~Gki~vf 492 (498)
T KOG4328|consen 416 RTGRWLTPFKAAWDPDYNLIVVGRYPRPIDVFDGNGGQMVCELHDPES---STIPSVNEFHPMRDTLAAGGNSSGKIYVF 492 (498)
T ss_pred cccccccchhheeCCCccEEEEeccCcceeEEcCCCCEEeeeccCccc---cccccceeecccccceeccCCccceEEEE
Confidence 2221 234888999999999999999998875554333221 12222346665 33555 5567888888
Q ss_pred Eec
Q 008820 535 LCN 537 (552)
Q Consensus 535 ~~~ 537 (552)
.-+
T Consensus 493 t~k 495 (498)
T KOG4328|consen 493 TNK 495 (498)
T ss_pred ecC
Confidence 654
No 130
>KOG1273 consensus WD40 repeat protein [General function prediction only]
Probab=99.86 E-value=7.9e-20 Score=161.95 Aligned_cols=268 Identities=17% Similarity=0.196 Sum_probs=202.2
Q ss_pred ccceeeecCcceEEEeeCCCeEEEEEe---------ecCccceEEEEEc--CCEEEEEeCCCcEEEEeCCCCeEEEEEeC
Q 008820 222 IDQARAAGGVKDLVNGLSKGNVKFKDL---------QGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKG 290 (552)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~l---------~~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~~~~~~~~~ 290 (552)
..+..|+..+..++.|..+|.+.+|+| .+|..+|++++|+ |+.|+|+|.|..|.+||+..|.+++.+.
T Consensus 26 a~~~~Fs~~G~~lAvGc~nG~vvI~D~~T~~iar~lsaH~~pi~sl~WS~dgr~LltsS~D~si~lwDl~~gs~l~rir- 104 (405)
T KOG1273|consen 26 AECCQFSRWGDYLAVGCANGRVVIYDFDTFRIARMLSAHVRPITSLCWSRDGRKLLTSSRDWSIKLWDLLKGSPLKRIR- 104 (405)
T ss_pred cceEEeccCcceeeeeccCCcEEEEEccccchhhhhhccccceeEEEecCCCCEeeeecCCceeEEEeccCCCceeEEE-
Confidence 457889999999999999999999985 6899999999999 9999999999999999999999999887
Q ss_pred CCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECC
Q 008820 291 HDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLL 370 (552)
Q Consensus 291 h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~ 370 (552)
..++|..+.|+|...+.++++-.+..-.+-++..+.. ..+..-.............+.+.|+++++|...|.+.++|..
T Consensus 105 f~spv~~~q~hp~k~n~~va~~~~~sp~vi~~s~~~h-~~Lp~d~d~dln~sas~~~fdr~g~yIitGtsKGkllv~~a~ 183 (405)
T KOG1273|consen 105 FDSPVWGAQWHPRKRNKCVATIMEESPVVIDFSDPKH-SVLPKDDDGDLNSSASHGVFDRRGKYIITGTSKGKLLVYDAE 183 (405)
T ss_pred ccCccceeeeccccCCeEEEEEecCCcEEEEecCCce-eeccCCCccccccccccccccCCCCEEEEecCcceEEEEecc
Confidence 6789999999998888877777666666777664221 111111111111111122577889999999999999999999
Q ss_pred CCceeEEecCCC-CCeEEEEEe--CCEEEEEeCCCcEEEEECCCC-------ce--eEEEecCCCCceEEEEEEcCCCCE
Q 008820 371 DGTLSCTMSGHK-SAVSTLAVC--NGVLYSGSRDGTIRLWSLSDH-------SL--LTVLEEDSSGAVSSVLSLTAVQHT 438 (552)
Q Consensus 371 ~~~~~~~~~~h~-~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~-------~~--~~~~~~~~~~~~~~~~~~s~~~~~ 438 (552)
+.+++..++-.. ..|..+.++ +..|+.-+.|..||.|+++.- ++ .+.+..--.......++|+.+|.+
T Consensus 184 t~e~vas~rits~~~IK~I~~s~~g~~liiNtsDRvIR~ye~~di~~~~r~~e~e~~~K~qDvVNk~~Wk~ccfs~dgeY 263 (405)
T KOG1273|consen 184 TLECVASFRITSVQAIKQIIVSRKGRFLIINTSDRVIRTYEISDIDDEGRDGEVEPEHKLQDVVNKLQWKKCCFSGDGEY 263 (405)
T ss_pred hheeeeeeeechheeeeEEEEeccCcEEEEecCCceEEEEehhhhcccCccCCcChhHHHHHHHhhhhhhheeecCCccE
Confidence 999998887655 678888888 559999999999999998631 11 122211111122333689999999
Q ss_pred EEEEEC-CCcEEEEe--CCcceeeeeccc-ceEEEEEec--CCEEEEEeCCCeEEEEecC
Q 008820 439 LVVSHE-SGSIKVWR--NDKFMKSMQTHK-GSVFAVFLE--GKWLFTGGWDKTVSVQELA 492 (552)
Q Consensus 439 l~~g~~-dg~i~iwd--~~~~~~~~~~h~-~~v~~v~~~--~~~l~sgs~dg~i~iwd~~ 492 (552)
++.|+. ...++||. ++++++.+.|.. .....+.|+ ...+++- ..|.+++|...
T Consensus 264 v~a~s~~aHaLYIWE~~~GsLVKILhG~kgE~l~DV~whp~rp~i~si-~sg~v~iw~~~ 322 (405)
T KOG1273|consen 264 VCAGSARAHALYIWEKSIGSLVKILHGTKGEELLDVNWHPVRPIIASI-ASGVVYIWAVV 322 (405)
T ss_pred EEeccccceeEEEEecCCcceeeeecCCchhheeecccccceeeeeec-cCCceEEEEee
Confidence 988764 45799997 678899998887 455667764 3344444 67899999764
No 131
>KOG0646 consensus WD40 repeat protein [General function prediction only]
Probab=99.86 E-value=5e-20 Score=171.54 Aligned_cols=264 Identities=19% Similarity=0.249 Sum_probs=178.9
Q ss_pred EEeCCC-cEEEEeCCCCeEEEEEeCC-CCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCccccccccCCCceeee
Q 008820 267 SSSFDK-SIHVWSLKDFSHVHTFKGH-DHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSG 344 (552)
Q Consensus 267 s~s~dg-~I~iwd~~~~~~~~~~~~h-~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~ 344 (552)
+++.|. ++.+||+.+|....++++. ...-.++.... +.+++++-..-..+.+|.+............. ....
T Consensus 12 ssS~d~~~~~~~dl~TGt~~~~ykg~~~a~~~sl~~l~-~~yllsaq~~rp~l~vw~i~k~~~~~q~~v~P-----g~v~ 85 (476)
T KOG0646|consen 12 SSSFDPINCIVWDLRTGTSLLQYKGSYLAQAASLTALN-NEYLLSAQLKRPLLHVWEILKKDQVVQYIVLP-----GPVH 85 (476)
T ss_pred ccCCCCcceeEEecCCCceeEEecCcccccchhhhhhc-hhheeeecccCccccccccCchhhhhhhcccc-----ccee
Confidence 344454 4999999999999999875 22222222221 24444444556689999887443222111111 1112
Q ss_pred EEEEeeCCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe-CC-EEEEEeCCCcEEEEECC---------CCc
Q 008820 345 IHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC-NG-VLYSGSRDGTIRLWSLS---------DHS 413 (552)
Q Consensus 345 ~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~-~~-~l~s~~~dg~i~iwd~~---------~~~ 413 (552)
....+++|.+++.|+..|.|++|.+.+|..+..+.+|-..|+|+.|+ |+ +|++||.||.|.+|++- +-+
T Consensus 86 al~s~n~G~~l~ag~i~g~lYlWelssG~LL~v~~aHYQ~ITcL~fs~dgs~iiTgskDg~V~vW~l~~lv~a~~~~~~~ 165 (476)
T KOG0646|consen 86 ALASSNLGYFLLAGTISGNLYLWELSSGILLNVLSAHYQSITCLKFSDDGSHIITGSKDGAVLVWLLTDLVSADNDHSVK 165 (476)
T ss_pred eeecCCCceEEEeecccCcEEEEEeccccHHHHHHhhccceeEEEEeCCCcEEEecCCCccEEEEEEEeecccccCCCcc
Confidence 33556778888888899999999999999999999999999999999 33 99999999999999873 234
Q ss_pred eeEEEecCCCCceEEEEEEcCCCCEEEEEECCCcEEEEeCCc--ceeeeecccceEEEE--EecCCEEEEEeCCCeEEEE
Q 008820 414 LLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDK--FMKSMQTHKGSVFAV--FLEGKWLFTGGWDKTVSVQ 489 (552)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~~--~~~~~~~h~~~v~~v--~~~~~~l~sgs~dg~i~iw 489 (552)
+.+.+..|.-....-.+.+.+....+++++.|.++++||+.. .+.++. ...++.++ ++.+..++.|+.+|.|.+.
T Consensus 166 p~~~f~~HtlsITDl~ig~Gg~~~rl~TaS~D~t~k~wdlS~g~LLlti~-fp~si~av~lDpae~~~yiGt~~G~I~~~ 244 (476)
T KOG0646|consen 166 PLHIFSDHTLSITDLQIGSGGTNARLYTASEDRTIKLWDLSLGVLLLTIT-FPSSIKAVALDPAERVVYIGTEEGKIFQN 244 (476)
T ss_pred ceeeeccCcceeEEEEecCCCccceEEEecCCceEEEEEeccceeeEEEe-cCCcceeEEEcccccEEEecCCcceEEee
Confidence 566676664333222233344457899999999999999653 444433 23445554 4578999999999999998
Q ss_pred ecCCCe--ee---ee---e---ccCCCcccC--cceEEEEEe-CC-eEEEEeCCCeEEEEEec
Q 008820 490 ELAGDE--FE---ED---V---IPTGAIPCG--SVITALLYW-QG-KLFVGCADRTVKIALCN 537 (552)
Q Consensus 490 d~~~~~--~~---~~---~---~~~~~~~~~--~~v~~l~~~-~~-~l~s~s~Dg~v~iw~~~ 537 (552)
++.... .. .. . .......+. ..|++++.+ ++ .|++|+.||.|+|||+.
T Consensus 245 ~~~~~~~~~~~v~~k~~~~~~t~~~~~~Gh~~~~~ITcLais~DgtlLlSGd~dg~VcvWdi~ 307 (476)
T KOG0646|consen 245 LLFKLSGQSAGVNQKGRHEENTQINVLVGHENESAITCLAISTDGTLLLSGDEDGKVCVWDIY 307 (476)
T ss_pred ehhcCCcccccccccccccccceeeeeccccCCcceeEEEEecCccEEEeeCCCCCEEEEecc
Confidence 875322 00 00 0 000011223 489999998 54 59999999999999986
No 132
>KOG4378 consensus Nuclear protein COP1 [Signal transduction mechanisms]
Probab=99.86 E-value=2.2e-20 Score=174.70 Aligned_cols=269 Identities=13% Similarity=0.187 Sum_probs=200.1
Q ss_pred CcEEEEeCCCCeEEEEEeCCC--CCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCcc-ccccccCCCceeeeEEEE
Q 008820 272 KSIHVWSLKDFSHVHTFKGHD--HKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEP-LKKWNEEKDWRYSGIHAL 348 (552)
Q Consensus 272 g~I~iwd~~~~~~~~~~~~h~--~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 348 (552)
.++++||.........+..|+ ..+.++.|.......+++.+.|..|++|.-.......+ +....+.. .. +.+.
T Consensus 12 d~~kl~D~s~~~~~~~~~~~t~~pg~~s~~w~~~n~lvvas~~gdk~~~~~~K~g~~~~Vp~~~k~~gd~---~~-Cv~~ 87 (673)
T KOG4378|consen 12 DKTKLSDFSDLETKSEYVHQTAEPGDFSFNWQRRNFLVVASMAGDKVMRIKEKDGKTPEVPRVRKLTGDN---AF-CVAC 87 (673)
T ss_pred CceEEeecccccCccccccCCCCCcceeeeccccceEEEeecCCceeEEEecccCCCCccceeeccccch---HH-HHhh
Confidence 379999997665544444333 34888999775544455566788999997553311111 11111111 11 1122
Q ss_pred eeCCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe--CCEEEEEeCCCcEEEEECCCCceeEEEecCCCCce
Q 008820 349 TTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC--NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAV 426 (552)
Q Consensus 349 ~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~ 426 (552)
.....++++|+..+.|+|||++...+.+.+++|++.|+++.++ +.+|++++..|.|.+..+.++.....+.... +..
T Consensus 88 ~s~S~y~~sgG~~~~Vkiwdl~~kl~hr~lkdh~stvt~v~YN~~DeyiAsvs~gGdiiih~~~t~~~tt~f~~~s-gqs 166 (673)
T KOG4378|consen 88 ASQSLYEISGGQSGCVKIWDLRAKLIHRFLKDHQSTVTYVDYNNTDEYIASVSDGGDIIIHGTKTKQKTTTFTIDS-GQS 166 (673)
T ss_pred hhcceeeeccCcCceeeehhhHHHHHhhhccCCcceeEEEEecCCcceeEEeccCCcEEEEecccCccccceecCC-CCe
Confidence 2234699999999999999999777778889999999999998 6699999999999999999998888887764 444
Q ss_pred EEEEEEcCCCCE-EEEEECCCcEEEEeCCc--c-eeeeecccceEEEEEe---cCCEEEEEeCCCeEEEEecCCCeeeee
Q 008820 427 SSVLSLTAVQHT-LVVSHESGSIKVWRNDK--F-MKSMQTHKGSVFAVFL---EGKWLFTGGWDKTVSVQELAGDEFEED 499 (552)
Q Consensus 427 ~~~~~~s~~~~~-l~~g~~dg~i~iwd~~~--~-~~~~~~h~~~v~~v~~---~~~~l~sgs~dg~i~iwd~~~~~~~~~ 499 (552)
...+.+++..+. |.+++.+|.|.+||... + ..-.+.|..+...++| +...|++.+.|..|.+||.........
T Consensus 167 vRll~ys~skr~lL~~asd~G~VtlwDv~g~sp~~~~~~~HsAP~~gicfspsne~l~vsVG~Dkki~~yD~~s~~s~~~ 246 (673)
T KOG4378|consen 167 VRLLRYSPSKRFLLSIASDKGAVTLWDVQGMSPIFHASEAHSAPCRGICFSPSNEALLVSVGYDKKINIYDIRSQASTDR 246 (673)
T ss_pred EEEeecccccceeeEeeccCCeEEEEeccCCCcccchhhhccCCcCcceecCCccceEEEecccceEEEeecccccccce
Confidence 445788887664 56788999999999653 2 3345679999887776 788999999999999999987655544
Q ss_pred eccCCCcccCcceEEEEEeC-Ce-EEEEeCCCeEEEEEecCCcceeEEEecccc
Q 008820 500 VIPTGAIPCGSVITALLYWQ-GK-LFVGCADRTVKIALCNRQIPEIFSLLLHIN 551 (552)
Q Consensus 500 ~~~~~~~~~~~~v~~l~~~~-~~-l~s~s~Dg~v~iw~~~~~~~~~~~~~gh~~ 551 (552)
+.. ..+.+.++|.+ +. |+.|+..|.|..||+.....++..+..|.+
T Consensus 247 l~y------~~Plstvaf~~~G~~L~aG~s~G~~i~YD~R~~k~Pv~v~sah~~ 294 (673)
T KOG4378|consen 247 LTY------SHPLSTVAFSECGTYLCAGNSKGELIAYDMRSTKAPVAVRSAHDA 294 (673)
T ss_pred eee------cCCcceeeecCCceEEEeecCCceEEEEecccCCCCceEeeeccc
Confidence 443 56789999995 43 888999999999999988888888887753
No 133
>KOG1408 consensus WD40 repeat protein [Function unknown]
Probab=99.86 E-value=4.4e-20 Score=179.77 Aligned_cols=235 Identities=16% Similarity=0.223 Sum_probs=186.2
Q ss_pred cceEEEEEc--CCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecC--CCCEEEEEcCCCcEEEEeCCCCCCC
Q 008820 253 DCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDE--DQPLCISGDSGGGIFVWSFSFPLGH 328 (552)
Q Consensus 253 ~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~~~~~~~~~h~~~v~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~~ 328 (552)
..|++++.+ +++||+|..-|+++||++.+-+....+..|...|.|+.|+.. +..+|++++.|..|.++|+... -
T Consensus 460 ~G~R~~~vSp~gqhLAsGDr~GnlrVy~Lq~l~~~~~~eAHesEilcLeyS~p~~~~kLLASasrdRlIHV~Dv~rn--y 537 (1080)
T KOG1408|consen 460 FGFRALAVSPDGQHLASGDRGGNLRVYDLQELEYTCFMEAHESEILCLEYSFPVLTNKLLASASRDRLIHVYDVKRN--Y 537 (1080)
T ss_pred cceEEEEECCCcceecccCccCceEEEEehhhhhhhheecccceeEEEeecCchhhhHhhhhccCCceEEEEecccc--c
Confidence 478999999 999999999999999999999999999999999999999853 4568999999999999998743 2
Q ss_pred ccccccccCCCceeeeEEEEeeCC--CEEEEeeCCCcEEEEECCCCceeEEecCC-----CCCeEEEEEeC--CEEEEEe
Q 008820 329 EPLKKWNEEKDWRYSGIHALTTSG--RYLYTGSGDRTIKAWSLLDGTLSCTMSGH-----KSAVSTLAVCN--GVLYSGS 399 (552)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~--~~l~sgs~dg~i~iwd~~~~~~~~~~~~h-----~~~v~~l~~~~--~~l~s~~ 399 (552)
..+++...|.. ....+ .|.-+| ...++++.|+.|.+--.+.......+..| ...++.+++.+ +++++++
T Consensus 538 ~l~qtld~HSs-sITsv-KFa~~gln~~MiscGADksimFr~~qk~~~g~~f~r~t~t~~ktTlYDm~Vdp~~k~v~t~c 615 (1080)
T KOG1408|consen 538 DLVQTLDGHSS-SITSV-KFACNGLNRKMISCGADKSIMFRVNQKASSGRLFPRHTQTLSKTTLYDMAVDPTSKLVVTVC 615 (1080)
T ss_pred chhhhhccccc-ceeEE-EEeecCCceEEEeccCchhhheehhccccCceeccccccccccceEEEeeeCCCcceEEEEe
Confidence 33444444332 22223 233333 38899999998765433322222223222 34677888874 4999999
Q ss_pred CCCcEEEEECCCCceeEEEecCCC--CceEEEEEEcCCCCEEEEEECCCcEEEEe--CCcceeeeecccceEEEEEe--c
Q 008820 400 RDGTIRLWSLSDHSLLTVLEEDSS--GAVSSVLSLTAVQHTLVVSHESGSIKVWR--NDKFMKSMQTHKGSVFAVFL--E 473 (552)
Q Consensus 400 ~dg~i~iwd~~~~~~~~~~~~~~~--~~~~~~~~~s~~~~~l~~g~~dg~i~iwd--~~~~~~~~~~h~~~v~~v~~--~ 473 (552)
.|..|+|||+.+++..+.|++.+. +.... +...|.|.++++.+.|.++.++| .++++....+|...|+.+.| |
T Consensus 616 QDrnirif~i~sgKq~k~FKgs~~~eG~lIK-v~lDPSgiY~atScsdktl~~~Df~sgEcvA~m~GHsE~VTG~kF~nD 694 (1080)
T KOG1408|consen 616 QDRNIRIFDIESGKQVKSFKGSRDHEGDLIK-VILDPSGIYLATSCSDKTLCFVDFVSGECVAQMTGHSEAVTGVKFLND 694 (1080)
T ss_pred cccceEEEeccccceeeeecccccCCCceEE-EEECCCccEEEEeecCCceEEEEeccchhhhhhcCcchheeeeeeccc
Confidence 999999999999999999987543 33333 57899999999999999999999 57899999999999999998 8
Q ss_pred CCEEEEEeCCCeEEEEecC
Q 008820 474 GKWLFTGGWDKTVSVQELA 492 (552)
Q Consensus 474 ~~~l~sgs~dg~i~iwd~~ 492 (552)
.++|++.+.||.|.+|.+.
T Consensus 695 CkHlISvsgDgCIFvW~lp 713 (1080)
T KOG1408|consen 695 CKHLISVSGDGCIFVWKLP 713 (1080)
T ss_pred chhheeecCCceEEEEECc
Confidence 8999999999999999875
No 134
>KOG2048 consensus WD40 repeat protein [General function prediction only]
Probab=99.86 E-value=7.6e-19 Score=170.79 Aligned_cols=279 Identities=19% Similarity=0.273 Sum_probs=211.1
Q ss_pred ecCccceEEEEEc--CCEEEEEeCCCcEEEEeCCCCe-EEEEEeCC-CCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCC
Q 008820 249 QGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFS-HVHTFKGH-DHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSF 324 (552)
Q Consensus 249 ~~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~~-~~~~~~~h-~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~ 324 (552)
.--..+|.++||+ .+.||.+-.||.|-||++...= +...+.++ +..|.+++|.+ +. .|.+.+.+|.|.-||+.+
T Consensus 22 d~~Ps~I~slA~s~kS~~lAvsRt~g~IEiwN~~~~w~~~~vi~g~~drsIE~L~W~e-~~-RLFS~g~sg~i~EwDl~~ 99 (691)
T KOG2048|consen 22 DYKPSEIVSLAYSHKSNQLAVSRTDGNIEIWNLSNNWFLEPVIHGPEDRSIESLAWAE-GG-RLFSSGLSGSITEWDLHT 99 (691)
T ss_pred eeeccceEEEEEeccCCceeeeccCCcEEEEccCCCceeeEEEecCCCCceeeEEEcc-CC-eEEeecCCceEEEEeccc
Confidence 3446789999999 8889999999999999998653 34455554 46899999985 33 568999999999999987
Q ss_pred CCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCceeE--EecCCCCCeEEEEEe-CC-EEEEEeC
Q 008820 325 PLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSC--TMSGHKSAVSTLAVC-NG-VLYSGSR 400 (552)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~--~~~~h~~~v~~l~~~-~~-~l~s~~~ 400 (552)
.+.......... ..-..+.+|.+..++.|+.||.++.++...++... .+...++.|.+++|+ ++ .+++|+.
T Consensus 100 lk~~~~~d~~gg-----~IWsiai~p~~~~l~IgcddGvl~~~s~~p~~I~~~r~l~rq~sRvLslsw~~~~~~i~~Gs~ 174 (691)
T KOG2048|consen 100 LKQKYNIDSNGG-----AIWSIAINPENTILAIGCDDGVLYDFSIGPDKITYKRSLMRQKSRVLSLSWNPTGTKIAGGSI 174 (691)
T ss_pred CceeEEecCCCc-----ceeEEEeCCccceEEeecCCceEEEEecCCceEEEEeecccccceEEEEEecCCccEEEeccc
Confidence 655444333221 11234667778899999999988888887776654 345567899999999 44 6999999
Q ss_pred CCcEEEEECCCCceeEEEecC-------CCCceEEEEEEcCCCCEEEEEECCCcEEEEe--CCcceeeeecccceEEEEE
Q 008820 401 DGTIRLWSLSDHSLLTVLEED-------SSGAVSSVLSLTAVQHTLVVSHESGSIKVWR--NDKFMKSMQTHKGSVFAVF 471 (552)
Q Consensus 401 dg~i~iwd~~~~~~~~~~~~~-------~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd--~~~~~~~~~~h~~~v~~v~ 471 (552)
||.|++||..++..++..... ....+.+++.. ....|++|...|+|.+|| .+++++.+..|.+.|.++.
T Consensus 175 Dg~Iriwd~~~~~t~~~~~~~~d~l~k~~~~iVWSv~~L--rd~tI~sgDS~G~V~FWd~~~gTLiqS~~~h~adVl~La 252 (691)
T KOG2048|consen 175 DGVIRIWDVKSGQTLHIITMQLDRLSKREPTIVWSVLFL--RDSTIASGDSAGTVTFWDSIFGTLIQSHSCHDADVLALA 252 (691)
T ss_pred CceEEEEEcCCCceEEEeeecccccccCCceEEEEEEEe--ecCcEEEecCCceEEEEcccCcchhhhhhhhhcceeEEE
Confidence 999999999999877633211 12334444334 345799999999999999 4678999999999999998
Q ss_pred e--cCCEEEEEeCCCeEEEEecCCCeeeeeeccCCCcccCcceEEEEEeCCeEEEEeCCCeEEEEEec
Q 008820 472 L--EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQGKLFVGCADRTVKIALCN 537 (552)
Q Consensus 472 ~--~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~l~s~s~Dg~v~iw~~~ 537 (552)
. ++.++++++.|+.|..|...+......... ....+...|.+++..+..+++|+.|..+.+-...
T Consensus 253 v~~~~d~vfsaGvd~~ii~~~~~~~~~~wv~~~-~r~~h~hdvrs~av~~~~l~sgG~d~~l~i~~s~ 319 (691)
T KOG2048|consen 253 VADNEDRVFSAGVDPKIIQYSLTTNKSEWVINS-RRDLHAHDVRSMAVIENALISGGRDFTLAICSSR 319 (691)
T ss_pred EcCCCCeEEEccCCCceEEEEecCCccceeeec-cccCCcccceeeeeecceEEecceeeEEEEcccc
Confidence 6 778999999999999998876644222111 1122355689999999999999999999887654
No 135
>KOG0270 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.86 E-value=1.7e-20 Score=173.54 Aligned_cols=241 Identities=19% Similarity=0.213 Sum_probs=172.7
Q ss_pred eEEEEEecC------CCCEEEEEcCCCcEEEEeCCCCCCCccccccc-------------c-CCCceeeeEEEEeeCC--
Q 008820 295 VMAVVYVDE------DQPLCISGDSGGGIFVWSFSFPLGHEPLKKWN-------------E-EKDWRYSGIHALTTSG-- 352 (552)
Q Consensus 295 v~~v~~~~~------~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~-------------~-~~~~~~~~~~~~~~~~-- 352 (552)
..|++|... .++++|.|+.|..|.|||+.--....+...+. . ....+...+.+++++.
T Consensus 176 PLC~ewld~~~~~~~~gNyvAiGtmdp~IeIWDLDI~d~v~P~~~LGs~~sk~~~k~~k~~~~~~gHTdavl~Ls~n~~~ 255 (463)
T KOG0270|consen 176 PLCIEWLDHGSKSGGAGNYVAIGTMDPEIEIWDLDIVDAVLPCVTLGSKASKKKKKKGKRSNSASGHTDAVLALSWNRNF 255 (463)
T ss_pred chhhhhhhcCCCCCCCcceEEEeccCceeEEeccccccccccceeechhhhhhhhhhcccccccccchHHHHHHHhcccc
Confidence 356777532 24699999999999999987433222221111 0 0011233334555543
Q ss_pred -CEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe---CCEEEEEeCCCcEEEEECCCCce-eEEEecCCCCceE
Q 008820 353 -RYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC---NGVLYSGSRDGTIRLWSLSDHSL-LTVLEEDSSGAVS 427 (552)
Q Consensus 353 -~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~---~~~l~s~~~dg~i~iwd~~~~~~-~~~~~~~~~~~~~ 427 (552)
+.|++||.|.+|++||+.++++..++..|.+.|.++.|+ +..|++|+.|+++.+.|.|.... -..++. .+.+-
T Consensus 256 ~nVLaSgsaD~TV~lWD~~~g~p~~s~~~~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~~~~s~~~wk~--~g~VE 333 (463)
T KOG0270|consen 256 RNVLASGSADKTVKLWDVDTGKPKSSITHHGKKVQTLEWHPYEPSVLLSGSYDGTVALKDCRDPSNSGKEWKF--DGEVE 333 (463)
T ss_pred ceeEEecCCCceEEEEEcCCCCcceehhhcCCceeEEEecCCCceEEEeccccceEEeeeccCccccCceEEe--ccceE
Confidence 489999999999999999999999999999999999999 45999999999999999994222 222222 23344
Q ss_pred EEEEEcCC-CCEEEEEECCCcEEEEeCC---cceeeeecccceEEEEEe---cCCEEEEEeCCCeEEEEecCCCeeeeee
Q 008820 428 SVLSLTAV-QHTLVVSHESGSIKVWRND---KFMKSMQTHKGSVFAVFL---EGKWLFTGGWDKTVSVQELAGDEFEEDV 500 (552)
Q Consensus 428 ~~~~~s~~-~~~l~~g~~dg~i~iwd~~---~~~~~~~~h~~~v~~v~~---~~~~l~sgs~dg~i~iwd~~~~~~~~~~ 500 (552)
. +.|.|. ...++++..||+|+-+|.| +++.+++.|..+|.++++ ...++++++.|+.|++|++.........
T Consensus 334 k-v~w~~~se~~f~~~tddG~v~~~D~R~~~~~vwt~~AHd~~ISgl~~n~~~p~~l~t~s~d~~Vklw~~~~~~~~~v~ 412 (463)
T KOG0270|consen 334 K-VAWDPHSENSFFVSTDDGTVYYFDIRNPGKPVWTLKAHDDEISGLSVNIQTPGLLSTASTDKVVKLWKFDVDSPKSVK 412 (463)
T ss_pred E-EEecCCCceeEEEecCCceEEeeecCCCCCceeEEEeccCCcceEEecCCCCcceeeccccceEEEEeecCCCCcccc
Confidence 4 456554 5677888899999999976 578899999999999997 4568999999999999999755432222
Q ss_pred ccCCCcccCcceEEEEEeC---CeEEEEeCCCeEEEEEecCCcc
Q 008820 501 IPTGAIPCGSVITALLYWQ---GKLFVGCADRTVKIALCNRQIP 541 (552)
Q Consensus 501 ~~~~~~~~~~~v~~l~~~~---~~l~s~s~Dg~v~iw~~~~~~~ 541 (552)
.+... .+...|+++.+ ..++.|+..+.++|||+-...+
T Consensus 413 ~~~~~---~~rl~c~~~~~~~a~~la~GG~k~~~~vwd~~~~~~ 453 (463)
T KOG0270|consen 413 EHSFK---LGRLHCFALDPDVAFTLAFGGEKAVLRVWDIFTNSP 453 (463)
T ss_pred ccccc---ccceeecccCCCcceEEEecCccceEEEeecccChh
Confidence 22111 23355566664 4589999999999999974443
No 136
>KOG1539 consensus WD repeat protein [General function prediction only]
Probab=99.86 E-value=4e-18 Score=169.38 Aligned_cols=293 Identities=17% Similarity=0.252 Sum_probs=216.6
Q ss_pred eeCCCeEEEEEeecCccceEEEEEcCCEEEEEeCCCcEEEEeCCCC-eE----EEEEeCCCCCeEEEEEecC-CCCEEEE
Q 008820 237 GLSKGNVKFKDLQGHRDCVTGLAVGGGFLFSSSFDKSIHVWSLKDF-SH----VHTFKGHDHKVMAVVYVDE-DQPLCIS 310 (552)
Q Consensus 237 ~~~~~~~~~~~l~~H~~~V~~l~~s~~~l~s~s~dg~I~iwd~~~~-~~----~~~~~~h~~~v~~v~~~~~-~~~~l~s 310 (552)
....++.....+.+|.+.|.-+..-|.+++++..++.+.||+..++ .. ...++...+.|+++. +|. --+-++.
T Consensus 99 ~~~rgk~i~~~~~~~~a~v~~l~~fGe~lia~d~~~~l~vw~~s~~~~e~~l~~~~~~~~~~~Ital~-HP~TYLNKIvv 177 (910)
T KOG1539|consen 99 AYARGKHIRHTTLLHGAKVHLLLPFGEHLIAVDISNILFVWKTSSIQEELYLQSTFLKVEGDFITALL-HPSTYLNKIVV 177 (910)
T ss_pred EEEccceEEEEeccccceEEEEeeecceEEEEEccCcEEEEEeccccccccccceeeeccCCceeeEe-cchhheeeEEE
Confidence 3345666677788999889888888999999999999999998874 11 122233333478775 443 2345789
Q ss_pred EcCCCcEEEEeCCCCCCCccccccccCCCceeeeEEEEeeCC--CEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEE
Q 008820 311 GDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSG--RYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTL 388 (552)
Q Consensus 311 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l 388 (552)
|+.+|.+.+|++++++....++.+. ..++++.+.+ +.++.|..+|+|.+++++.++.+.+|+...+.|+++
T Consensus 178 Gs~~G~lql~Nvrt~K~v~~f~~~~-------s~IT~ieqsPaLDVVaiG~~~G~ViifNlK~dkil~sFk~d~g~Vtsl 250 (910)
T KOG1539|consen 178 GSSQGRLQLWNVRTGKVVYTFQEFF-------SRITAIEQSPALDVVAIGLENGTVIIFNLKFDKILMSFKQDWGRVTSL 250 (910)
T ss_pred eecCCcEEEEEeccCcEEEEecccc-------cceeEeccCCcceEEEEeccCceEEEEEcccCcEEEEEEccccceeEE
Confidence 9999999999999887665555543 2345555544 489999999999999999999999998556999999
Q ss_pred EEe-CC--EEEEEeCCCcEEEEECCCCceeEEEecCC-------------------------------------------
Q 008820 389 AVC-NG--VLYSGSRDGTIRLWSLSDHSLLTVLEEDS------------------------------------------- 422 (552)
Q Consensus 389 ~~~-~~--~l~s~~~dg~i~iwd~~~~~~~~~~~~~~------------------------------------------- 422 (552)
+|. |+ .+++|+..|.+.+||+...+........|
T Consensus 251 SFrtDG~p~las~~~~G~m~~wDLe~kkl~~v~~nah~~sv~~~~fl~~epVl~ta~~DnSlk~~vfD~~dg~pR~LR~R 330 (910)
T KOG1539|consen 251 SFRTDGNPLLASGRSNGDMAFWDLEKKKLINVTRNAHYGSVTGATFLPGEPVLVTAGADNSLKVWVFDSGDGVPRLLRSR 330 (910)
T ss_pred EeccCCCeeEEeccCCceEEEEEcCCCeeeeeeeccccCCcccceecCCCceEeeccCCCceeEEEeeCCCCcchheeec
Confidence 999 44 88899999999999997543322221000
Q ss_pred --------------------------------------------------------------------------------
Q 008820 423 -------------------------------------------------------------------------------- 422 (552)
Q Consensus 423 -------------------------------------------------------------------------------- 422 (552)
T Consensus 331 ~GHs~Pp~~irfy~~~g~~ilsa~~Drt~r~fs~~~e~~~~~l~~~~~~~~~kk~~~~~~~~~k~p~i~~fa~~~~RE~~ 410 (910)
T KOG1539|consen 331 GGHSAPPSCIRFYGSQGHFILSAKQDRTLRSFSVISESQSQELGQLHNKKRAKKVNVFSTEKLKLPPIVEFAFENAREKE 410 (910)
T ss_pred cCCCCCchheeeeccCcEEEEecccCcchhhhhhhHHHHhHhhcccccccccccccccchhhhcCCcceeeecccchhhh
Confidence
Q ss_pred ------------------------------C------CceEEEEEEcCCCCEEEEEECCCcEEEEeCCccee--ee---e
Q 008820 423 ------------------------------S------GAVSSVLSLTAVQHTLVVSHESGSIKVWRNDKFMK--SM---Q 461 (552)
Q Consensus 423 ------------------------------~------~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~~~~~--~~---~ 461 (552)
+ .....+++.++.|++.+.|+..|.|.+|++...+. .+ .
T Consensus 411 W~Nv~~~h~~~~~~~tW~~~n~~~G~~~L~~~~~~~~~~~~~av~vs~CGNF~~IG~S~G~Id~fNmQSGi~r~sf~~~~ 490 (910)
T KOG1539|consen 411 WDNVITAHKGKRSAYTWNFRNKTSGRHVLDPKRFKKDDINATAVCVSFCGNFVFIGYSKGTIDRFNMQSGIHRKSFGDSP 490 (910)
T ss_pred hcceeEEecCcceEEEEeccCcccccEEecCccccccCcceEEEEEeccCceEEEeccCCeEEEEEcccCeeecccccCc
Confidence 0 01112356778888899999999999999765433 34 4
Q ss_pred cccceEEEEEec--CCEEEEEeCCCeEEEEecCCCeeeeeeccCCC----------------------------------
Q 008820 462 THKGSVFAVFLE--GKWLFTGGWDKTVSVQELAGDEFEEDVIPTGA---------------------------------- 505 (552)
Q Consensus 462 ~h~~~v~~v~~~--~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~---------------------------------- 505 (552)
.|..+|+.++.| ++.+++++.+|.+++||..+..+.........
T Consensus 491 ah~~~V~gla~D~~n~~~vsa~~~Gilkfw~f~~k~l~~~l~l~~~~~~iv~hr~s~l~a~~~ddf~I~vvD~~t~kvvR 570 (910)
T KOG1539|consen 491 AHKGEVTGLAVDGTNRLLVSAGADGILKFWDFKKKVLKKSLRLGSSITGIVYHRVSDLLAIALDDFSIRVVDVVTRKVVR 570 (910)
T ss_pred cccCceeEEEecCCCceEEEccCcceEEEEecCCcceeeeeccCCCcceeeeeehhhhhhhhcCceeEEEEEchhhhhhH
Confidence 799999999985 55799999999999999987653322211111
Q ss_pred --cccCcceEEEEEeC-Ce-EEEEeCCCeEEEEEec
Q 008820 506 --IPCGSVITALLYWQ-GK-LFVGCADRTVKIALCN 537 (552)
Q Consensus 506 --~~~~~~v~~l~~~~-~~-l~s~s~Dg~v~iw~~~ 537 (552)
..+...|++++|+| ++ |++++.|++||+||+.
T Consensus 571 ~f~gh~nritd~~FS~DgrWlisasmD~tIr~wDlp 606 (910)
T KOG1539|consen 571 EFWGHGNRITDMTFSPDGRWLISASMDSTIRTWDLP 606 (910)
T ss_pred HhhccccceeeeEeCCCCcEEEEeecCCcEEEEecc
Confidence 14678899999995 44 9999999999999997
No 137
>KOG1063 consensus RNA polymerase II elongator complex, subunit ELP2, WD repeat superfamily [Chromatin structure and dynamics; Transcription]
Probab=99.86 E-value=1.8e-19 Score=175.26 Aligned_cols=281 Identities=16% Similarity=0.220 Sum_probs=203.9
Q ss_pred ecCccceEEEEEc--CCEEEEEeCCCcEEEEeCCCC--------------------------------------------
Q 008820 249 QGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDF-------------------------------------------- 282 (552)
Q Consensus 249 ~~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~-------------------------------------------- 282 (552)
.||+++|.++.|+ +..|+++|.|.++.+|...+.
T Consensus 264 ~GHeDWV~sv~W~p~~~~LLSASaDksmiiW~pd~~tGiWv~~vRlGe~gg~a~GF~g~lw~~n~~~ii~~g~~Gg~hlW 343 (764)
T KOG1063|consen 264 MGHEDWVYSVWWHPEGLDLLSASADKSMIIWKPDENTGIWVDVVRLGEVGGSAGGFWGGLWSPNSNVIIAHGRTGGFHLW 343 (764)
T ss_pred cCcccceEEEEEccchhhheecccCcceEEEecCCccceEEEEEEeecccccccceeeEEEcCCCCEEEEecccCcEEEE
Confidence 4999999999999 668999999999999965421
Q ss_pred --------eEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCC-ccccccccCCCceeeeEEEEeeCCC
Q 008820 283 --------SHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGH-EPLKKWNEEKDWRYSGIHALTTSGR 353 (552)
Q Consensus 283 --------~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (552)
.....+.||.+.|.+++|.|.|+ ++++.+.|.+-|++---..+.. ..+.... .++ +...+.++-+...
T Consensus 344 kt~d~~~w~~~~~iSGH~~~V~dv~W~psGe-flLsvs~DQTTRlFa~wg~q~~wHEiaRPQ-iHG-yDl~c~~~vn~~~ 420 (764)
T KOG1063|consen 344 KTKDKTFWTQEPVISGHVDGVKDVDWDPSGE-FLLSVSLDQTTRLFARWGRQQEWHEIARPQ-IHG-YDLTCLSFVNEDL 420 (764)
T ss_pred eccCccceeeccccccccccceeeeecCCCC-EEEEeccccceeeecccccccceeeecccc-ccc-ccceeeehccCCc
Confidence 00112347889999999999877 7789999999999864411111 1111111 111 1112223333345
Q ss_pred EEEEeeCCCcEEEEECCCC-------------------------------------------------------------
Q 008820 354 YLYTGSGDRTIKAWSLLDG------------------------------------------------------------- 372 (552)
Q Consensus 354 ~l~sgs~dg~i~iwd~~~~------------------------------------------------------------- 372 (552)
.+++|.....+++|+....
T Consensus 421 ~FVSgAdEKVlRvF~aPk~fv~~l~~i~g~~~~~~~~~p~gA~VpaLGLSnKa~~~~e~~~G~~~~~~~et~~~~~p~~L 500 (764)
T KOG1063|consen 421 QFVSGADEKVLRVFEAPKSFVKSLMAICGKCFKGSDELPDGANVPALGLSNKAFFPGETNTGGEAAVCAETPLAAAPCEL 500 (764)
T ss_pred eeeecccceeeeeecCcHHHHHHHHHHhCccccCchhcccccccccccccCCCCcccccccccccceeeecccccCchhc
Confidence 7888888888899876321
Q ss_pred ---------------ceeEEecCCCCCeEEEEEe--CCEEEEEeCCC-----cEEEEECCCCceeEEEecCCCCceEEEE
Q 008820 373 ---------------TLSCTMSGHKSAVSTLAVC--NGVLYSGSRDG-----TIRLWSLSDHSLLTVLEEDSSGAVSSVL 430 (552)
Q Consensus 373 ---------------~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg-----~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 430 (552)
..++++.||...|++++.+ ++++++++... -|++|+..+-...+.+..|.- ....+
T Consensus 501 ~ePP~EdqLq~~tLwPEv~KLYGHGyEv~~l~~s~~gnliASaCKS~~~ehAvI~lw~t~~W~~~~~L~~HsL--TVT~l 578 (764)
T KOG1063|consen 501 TEPPTEDQLQQNTLWPEVHKLYGHGYEVYALAISPTGNLIASACKSSLKEHAVIRLWNTANWLQVQELEGHSL--TVTRL 578 (764)
T ss_pred cCCChHHHHHHhccchhhHHhccCceeEEEEEecCCCCEEeehhhhCCccceEEEEEeccchhhhheecccce--EEEEE
Confidence 1122345899999999999 55888888654 489999998888888877643 33347
Q ss_pred EEcCCCCEEEEEECCCcEEEEeCCc------ceeeeecccceEEEEEe--cCCEEEEEeCCCeEEEEecCCC--eeeeee
Q 008820 431 SLTAVQHTLVVSHESGSIKVWRNDK------FMKSMQTHKGSVFAVFL--EGKWLFTGGWDKTVSVQELAGD--EFEEDV 500 (552)
Q Consensus 431 ~~s~~~~~l~~g~~dg~i~iwd~~~------~~~~~~~h~~~v~~v~~--~~~~l~sgs~dg~i~iwd~~~~--~~~~~~ 500 (552)
.||||+++|++.+.|.++.+|...+ .....+.|+.-|.+.+| ++.+++|+|.|.+|++|..... +....+
T Consensus 579 ~FSpdg~~LLsvsRDRt~sl~~~~~~~~~e~~fa~~k~HtRIIWdcsW~pde~~FaTaSRDK~VkVW~~~~~~d~~i~~~ 658 (764)
T KOG1063|consen 579 AFSPDGRYLLSVSRDRTVSLYEVQEDIKDEFRFACLKAHTRIIWDCSWSPDEKYFATASRDKKVKVWEEPDLRDKYISRF 658 (764)
T ss_pred EECCCCcEEEEeecCceEEeeeeecccchhhhhccccccceEEEEcccCcccceeEEecCCceEEEEeccCchhhhhhhh
Confidence 9999999999999999999997432 12346789999999887 8899999999999999999876 333332
Q ss_pred ccCCCcccCcceEEEEEeC-------CeEEEEeCCCeEEEEEec
Q 008820 501 IPTGAIPCGSVITALLYWQ-------GKLFVGCADRTVKIALCN 537 (552)
Q Consensus 501 ~~~~~~~~~~~v~~l~~~~-------~~l~s~s~Dg~v~iw~~~ 537 (552)
...+....|+++++.+ +.+++|-..|.|.+|..+
T Consensus 659 ---a~~~~~~aVTAv~~~~~~~~e~~~~vavGle~GeI~l~~~~ 699 (764)
T KOG1063|consen 659 ---ACLKFSLAVTAVAYLPVDHNEKGDVVAVGLEKGEIVLWRRK 699 (764)
T ss_pred ---chhccCCceeeEEeeccccccccceEEEEecccEEEEEecc
Confidence 2334477899999884 236788999999999976
No 138
>KOG0267 consensus Microtubule severing protein katanin p80 subunit B (contains WD40 repeats) [Cell cycle control, cell division, chromosome partitioning]
Probab=99.85 E-value=9.2e-22 Score=191.94 Aligned_cols=208 Identities=24% Similarity=0.426 Sum_probs=173.6
Q ss_pred cceEEEeeCCCeEEEEE---------eecCccceEEEEEc--CCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEE
Q 008820 231 VKDLVNGLSKGNVKFKD---------LQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVV 299 (552)
Q Consensus 231 ~~~~~~~~~~~~~~~~~---------l~~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~~~~~~~~~h~~~v~~v~ 299 (552)
.+.++.+.++..+.+|. |.+|+.+|.++.|+ ..+|++|+.+|+|++||+++++.++++.+|...+.++.
T Consensus 40 ~r~~~~Gg~~~k~~L~~i~kp~~i~S~~~hespIeSl~f~~~E~LlaagsasgtiK~wDleeAk~vrtLtgh~~~~~sv~ 119 (825)
T KOG0267|consen 40 SRSLVTGGEDEKVNLWAIGKPNAITSLTGHESPIESLTFDTSERLLAAGSASGTIKVWDLEEAKIVRTLTGHLLNITSVD 119 (825)
T ss_pred ceeeccCCCceeeccccccCCchhheeeccCCcceeeecCcchhhhcccccCCceeeeehhhhhhhhhhhccccCcceee
Confidence 34455555555554443 78999999999999 78899999999999999999999999999999999999
Q ss_pred EecCCCCEEEEEcCCCcEEEEeCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCceeEEec
Q 008820 300 YVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMS 379 (552)
Q Consensus 300 ~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~ 379 (552)
|+|-+. +.++|+.|+.+++||.+...+. ..+..+. ....+..|+|+|+++++|+.|.++++||+..|+....|.
T Consensus 120 f~P~~~-~~a~gStdtd~~iwD~Rk~Gc~---~~~~s~~--~vv~~l~lsP~Gr~v~~g~ed~tvki~d~~agk~~~ef~ 193 (825)
T KOG0267|consen 120 FHPYGE-FFASGSTDTDLKIWDIRKKGCS---HTYKSHT--RVVDVLRLSPDGRWVASGGEDNTVKIWDLTAGKLSKEFK 193 (825)
T ss_pred eccceE-EeccccccccceehhhhccCce---eeecCCc--ceeEEEeecCCCceeeccCCcceeeeecccccccccccc
Confidence 999776 5599999999999999854333 3333322 445677999999999999999999999999999999999
Q ss_pred CCCCCeEEEEEeCC--EEEEEeCCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEECCC
Q 008820 380 GHKSAVSTLAVCNG--VLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESG 446 (552)
Q Consensus 380 ~h~~~v~~l~~~~~--~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg 446 (552)
.|.+.+.++.|++. ++++|+.|+++++||+++.+.+....... ..+.+ ..|++++..+.+|....
T Consensus 194 ~~e~~v~sle~hp~e~Lla~Gs~d~tv~f~dletfe~I~s~~~~~-~~v~~-~~fn~~~~~~~~G~q~s 260 (825)
T KOG0267|consen 194 SHEGKVQSLEFHPLEVLLAPGSSDRTVRFWDLETFEVISSGKPET-DGVRS-LAFNPDGKIVLSGEQIS 260 (825)
T ss_pred cccccccccccCchhhhhccCCCCceeeeeccceeEEeeccCCcc-CCcee-eeecCCceeeecCchhh
Confidence 99999999999943 88899999999999999988887776663 33444 69999999998887653
No 139
>KOG2048 consensus WD40 repeat protein [General function prediction only]
Probab=99.85 E-value=1.1e-18 Score=169.74 Aligned_cols=265 Identities=18% Similarity=0.244 Sum_probs=209.3
Q ss_pred cccceeeecCcceEEEeeCCCeEEEEEe----------ecC-ccceEEEEEc-CCEEEEEeCCCcEEEEeCCCCeEEEEE
Q 008820 221 DIDQARAAGGVKDLVNGLSKGNVKFKDL----------QGH-RDCVTGLAVG-GGFLFSSSFDKSIHVWSLKDFSHVHTF 288 (552)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l----------~~H-~~~V~~l~~s-~~~l~s~s~dg~I~iwd~~~~~~~~~~ 288 (552)
.+.+++++...+.++.+..+|.+.+|.+ .|| .+.|.+++|+ +..|.+.+.+|+|.-||+.+++....+
T Consensus 27 ~I~slA~s~kS~~lAvsRt~g~IEiwN~~~~w~~~~vi~g~~drsIE~L~W~e~~RLFS~g~sg~i~EwDl~~lk~~~~~ 106 (691)
T KOG2048|consen 27 EIVSLAYSHKSNQLAVSRTDGNIEIWNLSNNWFLEPVIHGPEDRSIESLAWAEGGRLFSSGLSGSITEWDLHTLKQKYNI 106 (691)
T ss_pred ceEEEEEeccCCceeeeccCCcEEEEccCCCceeeEEEecCCCCceeeEEEccCCeEEeecCCceEEEEecccCceeEEe
Confidence 4778888999999999999999999984 344 5689999999 999999999999999999999999999
Q ss_pred eCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCccccccccCCCceeeeEEE--EeeCCCEEEEeeCCCcEEE
Q 008820 289 KGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHA--LTTSGRYLYTGSGDRTIKA 366 (552)
Q Consensus 289 ~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~sgs~dg~i~i 366 (552)
....+.|.+++.+|.+ ..++.|+.||.+..++...+.... ...+.. ....+.+ +.+++..+++|+.||.|++
T Consensus 107 d~~gg~IWsiai~p~~-~~l~IgcddGvl~~~s~~p~~I~~-~r~l~r----q~sRvLslsw~~~~~~i~~Gs~Dg~Iri 180 (691)
T KOG2048|consen 107 DSNGGAIWSIAINPEN-TILAIGCDDGVLYDFSIGPDKITY-KRSLMR----QKSRVLSLSWNPTGTKIAGGSIDGVIRI 180 (691)
T ss_pred cCCCcceeEEEeCCcc-ceEEeecCCceEEEEecCCceEEE-Eeeccc----ccceEEEEEecCCccEEEecccCceEEE
Confidence 9999999999999865 477889999977777766432111 111111 1223444 4555668999999999999
Q ss_pred EECCCCceeEEe-----cC---CCCCeEEEEEe-CCEEEEEeCCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCC
Q 008820 367 WSLLDGTLSCTM-----SG---HKSAVSTLAVC-NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQH 437 (552)
Q Consensus 367 wd~~~~~~~~~~-----~~---h~~~v~~l~~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ 437 (552)
||+.++..++.. .. ...-|.++.+- ++.|++|..-|+|.+||...+..++.+..+. ..+.+ ++..++++
T Consensus 181 wd~~~~~t~~~~~~~~d~l~k~~~~iVWSv~~Lrd~tI~sgDS~G~V~FWd~~~gTLiqS~~~h~-adVl~-Lav~~~~d 258 (691)
T KOG2048|consen 181 WDVKSGQTLHIITMQLDRLSKREPTIVWSVLFLRDSTIASGDSAGTVTFWDSIFGTLIQSHSCHD-ADVLA-LAVADNED 258 (691)
T ss_pred EEcCCCceEEEeeecccccccCCceEEEEEEEeecCcEEEecCCceEEEEcccCcchhhhhhhhh-cceeE-EEEcCCCC
Confidence 999998877622 11 22235666666 8899999999999999999999999888774 34444 68899999
Q ss_pred EEEEEECCCcEEEEeCCcc------eeeeecccceEEEEEecCCEEEEEeCCCeEEEEecCC
Q 008820 438 TLVVSHESGSIKVWRNDKF------MKSMQTHKGSVFAVFLEGKWLFTGGWDKTVSVQELAG 493 (552)
Q Consensus 438 ~l~~g~~dg~i~iwd~~~~------~~~~~~h~~~v~~v~~~~~~l~sgs~dg~i~iwd~~~ 493 (552)
.+++++.|+.|..|..... ......|...|.+++.-+..+++|+.|..+.+-....
T Consensus 259 ~vfsaGvd~~ii~~~~~~~~~~wv~~~~r~~h~hdvrs~av~~~~l~sgG~d~~l~i~~s~~ 320 (691)
T KOG2048|consen 259 RVFSAGVDPKIIQYSLTTNKSEWVINSRRDLHAHDVRSMAVIENALISGGRDFTLAICSSRE 320 (691)
T ss_pred eEEEccCCCceEEEEecCCccceeeeccccCCcccceeeeeecceEEecceeeEEEEccccc
Confidence 9999999999999874322 2234568889999988777999999999999887665
No 140
>KOG2106 consensus Uncharacterized conserved protein, contains HELP and WD40 domains [Function unknown]
Probab=99.85 E-value=1.4e-17 Score=156.57 Aligned_cols=300 Identities=17% Similarity=0.220 Sum_probs=220.1
Q ss_pred ccccceeeecCcceEEEeeCCCeEEEEEee------------cC-ccceEEEEEc-CCEEEEEeCCCcEEEEeCCCCeEE
Q 008820 220 ADIDQARAAGGVKDLVNGLSKGNVKFKDLQ------------GH-RDCVTGLAVG-GGFLFSSSFDKSIHVWSLKDFSHV 285 (552)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~------------~H-~~~V~~l~~s-~~~l~s~s~dg~I~iwd~~~~~~~ 285 (552)
+.+..+.+.+.+..++.....+.+..|++. ++ +.-|.|++|. +.-++||..+|.|.||+..+.+..
T Consensus 201 e~v~~a~FHPtd~nliit~Gk~H~~Fw~~~~~~l~k~~~~fek~ekk~Vl~v~F~engdviTgDS~G~i~Iw~~~~~~~~ 280 (626)
T KOG2106|consen 201 EVVFLATFHPTDPNLIITCGKGHLYFWTLRGGSLVKRQGIFEKREKKFVLCVTFLENGDVITGDSGGNILIWSKGTNRIS 280 (626)
T ss_pred ceEEEEEeccCCCcEEEEeCCceEEEEEccCCceEEEeeccccccceEEEEEEEcCCCCEEeecCCceEEEEeCCCceEE
Confidence 345667777777777766667777777643 22 3679999999 889999999999999999888888
Q ss_pred EEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEE
Q 008820 286 HTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIK 365 (552)
Q Consensus 286 ~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~ 365 (552)
+....|.+.|.+++...++. |++|+.|..|..|| ..-+....++... ....+..+.+.+.-|+.|...+.|.
T Consensus 281 k~~~aH~ggv~~L~~lr~Gt--llSGgKDRki~~Wd-~~y~k~r~~elPe-----~~G~iRtv~e~~~di~vGTtrN~iL 352 (626)
T KOG2106|consen 281 KQVHAHDGGVFSLCMLRDGT--LLSGGKDRKIILWD-DNYRKLRETELPE-----QFGPIRTVAEGKGDILVGTTRNFIL 352 (626)
T ss_pred eEeeecCCceEEEEEecCcc--EeecCccceEEecc-ccccccccccCch-----hcCCeeEEecCCCcEEEeeccceEE
Confidence 77779999999999987664 56799999999999 3222222222221 1223445555544588888888887
Q ss_pred EEECCCCceeEEecCCCCCeEEEEEe--CCEEEEEeCCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEE
Q 008820 366 AWSLLDGTLSCTMSGHKSAVSTLAVC--NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSH 443 (552)
Q Consensus 366 iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~ 443 (552)
.=.++++-.+ ...+|......++.+ .+.+++++.|+.+++|+ ..++..+..... ...+ ..|+|.| .++.|.
T Consensus 353 ~Gt~~~~f~~-~v~gh~delwgla~hps~~q~~T~gqdk~v~lW~--~~k~~wt~~~~d--~~~~-~~fhpsg-~va~Gt 425 (626)
T KOG2106|consen 353 QGTLENGFTL-TVQGHGDELWGLATHPSKNQLLTCGQDKHVRLWN--DHKLEWTKIIED--PAEC-ADFHPSG-VVAVGT 425 (626)
T ss_pred EeeecCCceE-EEEecccceeeEEcCCChhheeeccCcceEEEcc--CCceeEEEEecC--ceeE-eeccCcc-eEEEee
Confidence 7777665444 445688899999988 45999999999999999 566666655442 2333 6999999 999999
Q ss_pred CCCcEEEEeCCcc-eeeeecccceEEEEEe--cCCEEEEEeCCCeEEEEecCCCeeeeeeccCCCcccCcceEEEEEeC-
Q 008820 444 ESGSIKVWRNDKF-MKSMQTHKGSVFAVFL--EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQ- 519 (552)
Q Consensus 444 ~dg~i~iwd~~~~-~~~~~~h~~~v~~v~~--~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~~- 519 (552)
..|...+.|..+. .-++.....++.++.+ +|.+||.|+.|+.|++|-+.............. .++|+.+.|+.
T Consensus 426 ~~G~w~V~d~e~~~lv~~~~d~~~ls~v~ysp~G~~lAvgs~d~~iyiy~Vs~~g~~y~r~~k~~---gs~ithLDwS~D 502 (626)
T KOG2106|consen 426 ATGRWFVLDTETQDLVTIHTDNEQLSVVRYSPDGAFLAVGSHDNHIYIYRVSANGRKYSRVGKCS---GSPITHLDWSSD 502 (626)
T ss_pred ccceEEEEecccceeEEEEecCCceEEEEEcCCCCEEEEecCCCeEEEEEECCCCcEEEEeeeec---CceeEEeeecCC
Confidence 9999999997652 2222223667777765 999999999999999999975543333222222 37899999994
Q ss_pred -CeEEEEeCCCeEEEEEec
Q 008820 520 -GKLFVGCADRTVKIALCN 537 (552)
Q Consensus 520 -~~l~s~s~Dg~v~iw~~~ 537 (552)
+.+.+-+.|-.|-.|...
T Consensus 503 s~~~~~~S~d~eiLyW~~~ 521 (626)
T KOG2106|consen 503 SQFLVSNSGDYEILYWKPS 521 (626)
T ss_pred CceEEeccCceEEEEEccc
Confidence 348888999999999443
No 141
>KOG0267 consensus Microtubule severing protein katanin p80 subunit B (contains WD40 repeats) [Cell cycle control, cell division, chromosome partitioning]
Probab=99.85 E-value=3e-21 Score=188.39 Aligned_cols=218 Identities=21% Similarity=0.392 Sum_probs=185.4
Q ss_pred eecCccceEEEEEc--CCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCC
Q 008820 248 LQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFP 325 (552)
Q Consensus 248 l~~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~ 325 (552)
+..|...|.++..- ++.+++|+.|..+-+|.+.....+..+.+|..+|.++.|++..
T Consensus 24 ~~~hsaav~~lk~~~s~r~~~~Gg~~~k~~L~~i~kp~~i~S~~~hespIeSl~f~~~E--------------------- 82 (825)
T KOG0267|consen 24 FVAHSAAVGCLKIRKSSRSLVTGGEDEKVNLWAIGKPNAITSLTGHESPIESLTFDTSE--------------------- 82 (825)
T ss_pred hhhhhhhhceeeeeccceeeccCCCceeeccccccCCchhheeeccCCcceeeecCcch---------------------
Confidence 45689999988865 8999999999999999998888888899999999999886532
Q ss_pred CCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe--CCEEEEEeCCCc
Q 008820 326 LGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC--NGVLYSGSRDGT 403 (552)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~ 403 (552)
..|++|+.+|+|++||++.++.++++.+|...+.++.|+ ..+.++|+.|+.
T Consensus 83 ---------------------------~LlaagsasgtiK~wDleeAk~vrtLtgh~~~~~sv~f~P~~~~~a~gStdtd 135 (825)
T KOG0267|consen 83 ---------------------------RLLAAGSASGTIKVWDLEEAKIVRTLTGHLLNITSVDFHPYGEFFASGSTDTD 135 (825)
T ss_pred ---------------------------hhhcccccCCceeeeehhhhhhhhhhhccccCcceeeeccceEEecccccccc
Confidence 346677788888888888888899999999999999999 458899999999
Q ss_pred EEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEECCCcEEEEeC--CcceeeeecccceEEEEEe--cCCEEEE
Q 008820 404 IRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRN--DKFMKSMQTHKGSVFAVFL--EGKWLFT 479 (552)
Q Consensus 404 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~--~~~~~~~~~h~~~v~~v~~--~~~~l~s 479 (552)
+++||.+...+.+.+..+ .. +..++.|+|+|+++++|++|.+++|||. ++....|+.|.+.+.++.+ ..-.+++
T Consensus 136 ~~iwD~Rk~Gc~~~~~s~-~~-vv~~l~lsP~Gr~v~~g~ed~tvki~d~~agk~~~ef~~~e~~v~sle~hp~e~Lla~ 213 (825)
T KOG0267|consen 136 LKIWDIRKKGCSHTYKSH-TR-VVDVLRLSPDGRWVASGGEDNTVKIWDLTAGKLSKEFKSHEGKVQSLEFHPLEVLLAP 213 (825)
T ss_pred ceehhhhccCceeeecCC-cc-eeEEEeecCCCceeeccCCcceeeeecccccccccccccccccccccccCchhhhhcc
Confidence 999999988899999884 33 4445799999999999999999999995 5688899999999999987 5668889
Q ss_pred EeCCCeEEEEecCCCeeeeeeccCCCcccCcceEEEEEeCC
Q 008820 480 GGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQG 520 (552)
Q Consensus 480 gs~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~ 520 (552)
||.|+++++||+++.+........ ...|.+..|+++
T Consensus 214 Gs~d~tv~f~dletfe~I~s~~~~-----~~~v~~~~fn~~ 249 (825)
T KOG0267|consen 214 GSSDRTVRFWDLETFEVISSGKPE-----TDGVRSLAFNPD 249 (825)
T ss_pred CCCCceeeeeccceeEEeeccCCc-----cCCceeeeecCC
Confidence 999999999999987665544332 556899999954
No 142
>KOG1273 consensus WD40 repeat protein [General function prediction only]
Probab=99.84 E-value=8.4e-19 Score=155.49 Aligned_cols=269 Identities=9% Similarity=0.119 Sum_probs=191.2
Q ss_pred eEEEEEc--CCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCcccc
Q 008820 255 VTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLK 332 (552)
Q Consensus 255 V~~l~~s--~~~l~s~s~dg~I~iwd~~~~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~ 332 (552)
-.|+.|+ |.+||.|+.||.|.|||+.|...-+.+.+|..+|.+++|+++|. .|+++|.|..|.+||+..+...+.++
T Consensus 26 a~~~~Fs~~G~~lAvGc~nG~vvI~D~~T~~iar~lsaH~~pi~sl~WS~dgr-~LltsS~D~si~lwDl~~gs~l~rir 104 (405)
T KOG1273|consen 26 AECCQFSRWGDYLAVGCANGRVVIYDFDTFRIARMLSAHVRPITSLCWSRDGR-KLLTSSRDWSIKLWDLLKGSPLKRIR 104 (405)
T ss_pred cceEEeccCcceeeeeccCCcEEEEEccccchhhhhhccccceeEEEecCCCC-EeeeecCCceeEEEeccCCCceeEEE
Confidence 6789999 99999999999999999999999899999999999999999765 77999999999999999887555444
Q ss_pred ccccCCCceeeeEEEEeeCC-CEEEEeeCCCcEEEEECCCCceeEEe-c-CCCC----CeEEEEEe--CCEEEEEeCCCc
Q 008820 333 KWNEEKDWRYSGIHALTTSG-RYLYTGSGDRTIKAWSLLDGTLSCTM-S-GHKS----AVSTLAVC--NGVLYSGSRDGT 403 (552)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~-~~l~sgs~dg~i~iwd~~~~~~~~~~-~-~h~~----~v~~l~~~--~~~l~s~~~dg~ 403 (552)
.... ..-..++|.. +.+++.-.+..-.+-++..+ ++++ . ...+ .-.+..|. ++++++|...|.
T Consensus 105 f~sp------v~~~q~hp~k~n~~va~~~~~sp~vi~~s~~--~h~~Lp~d~d~dln~sas~~~fdr~g~yIitGtsKGk 176 (405)
T KOG1273|consen 105 FDSP------VWGAQWHPRKRNKCVATIMEESPVVIDFSDP--KHSVLPKDDDGDLNSSASHGVFDRRGKYIITGTSKGK 176 (405)
T ss_pred ccCc------cceeeeccccCCeEEEEEecCCcEEEEecCC--ceeeccCCCccccccccccccccCCCCEEEEecCcce
Confidence 3211 1112344433 34444444444555555442 2222 1 1111 11222354 669999999999
Q ss_pred EEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEECCCcEEEEeCCcceee-----------eec--ccceEEEE
Q 008820 404 IRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDKFMKS-----------MQT--HKGSVFAV 470 (552)
Q Consensus 404 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~~~~~~-----------~~~--h~~~v~~v 470 (552)
+.++|..+.+++..++......+.. +-++..|+.++.-+.|..|+.|+.+..... ++. ....-.++
T Consensus 177 llv~~a~t~e~vas~rits~~~IK~-I~~s~~g~~liiNtsDRvIR~ye~~di~~~~r~~e~e~~~K~qDvVNk~~Wk~c 255 (405)
T KOG1273|consen 177 LLVYDAETLECVASFRITSVQAIKQ-IIVSRKGRFLIINTSDRVIRTYEISDIDDEGRDGEVEPEHKLQDVVNKLQWKKC 255 (405)
T ss_pred EEEEecchheeeeeeeechheeeeE-EEEeccCcEEEEecCCceEEEEehhhhcccCccCCcChhHHHHHHHhhhhhhhe
Confidence 9999999999998888765344444 588999999999999999999986532221 111 11122233
Q ss_pred Ee--cCCEEEEEeC-CCeEEEEecCCCeeeeeeccCCCcccCcceEEEEEeCCe-EEEEeCCCeEEEEEec
Q 008820 471 FL--EGKWLFTGGW-DKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQGK-LFVGCADRTVKIALCN 537 (552)
Q Consensus 471 ~~--~~~~l~sgs~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~-l~s~s~Dg~v~iw~~~ 537 (552)
.| +|.+++.|+. ...++||.-..+.+...+.... ......+.|++-+ ++..-..|.|+||...
T Consensus 256 cfs~dgeYv~a~s~~aHaLYIWE~~~GsLVKILhG~k----gE~l~DV~whp~rp~i~si~sg~v~iw~~~ 322 (405)
T KOG1273|consen 256 CFSGDGEYVCAGSARAHALYIWEKSIGSLVKILHGTK----GEELLDVNWHPVRPIIASIASGVVYIWAVV 322 (405)
T ss_pred eecCCccEEEeccccceeEEEEecCCcceeeeecCCc----hhheeecccccceeeeeeccCCceEEEEee
Confidence 44 8888887774 4579999999998887766542 3457788898865 4444488999999876
No 143
>KOG2096 consensus WD40 repeat protein [General function prediction only]
Probab=99.84 E-value=8.3e-19 Score=155.72 Aligned_cols=245 Identities=16% Similarity=0.214 Sum_probs=168.0
Q ss_pred EEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCC--CccccccccCCCceeeeEEEEeeCCC-EEEEeeCCC
Q 008820 286 HTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLG--HEPLKKWNEEKDWRYSGIHALTTSGR-YLYTGSGDR 362 (552)
Q Consensus 286 ~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~sgs~dg 362 (552)
..+++|.+.|++++|+.+|. .|++++.|++|++|+++.-.. .+.++.-. ..+ + .....|+||-+ .+++.-...
T Consensus 80 ~~LKgH~~~vt~~~FsSdGK-~lat~~~Dr~Ir~w~~~DF~~~eHr~~R~nv-e~d-h-pT~V~FapDc~s~vv~~~~g~ 155 (420)
T KOG2096|consen 80 SVLKGHKKEVTDVAFSSDGK-KLATISGDRSIRLWDVRDFENKEHRCIRQNV-EYD-H-PTRVVFAPDCKSVVVSVKRGN 155 (420)
T ss_pred hhhhccCCceeeeEEcCCCc-eeEEEeCCceEEEEecchhhhhhhhHhhccc-cCC-C-ceEEEECCCcceEEEEEccCC
Confidence 45789999999999998766 679999999999999875221 11121111 111 2 23457888877 555566667
Q ss_pred cEEEEECCC---CceeEE--------e-cCCCCCeEEEEEeCC--EEEEEeCCCcEEEEECCCCceeEEEecCCCCceEE
Q 008820 363 TIKAWSLLD---GTLSCT--------M-SGHKSAVSTLAVCNG--VLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSS 428 (552)
Q Consensus 363 ~i~iwd~~~---~~~~~~--------~-~~h~~~v~~l~~~~~--~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~ 428 (552)
++++|.+.. |..... + +.|+-.+..+-..++ +|++++.|..|.+||++ |+.+..+.........
T Consensus 156 ~l~vyk~~K~~dG~~~~~~v~~D~~~f~~kh~v~~i~iGiA~~~k~imsas~dt~i~lw~lk-Gq~L~~idtnq~~n~~- 233 (420)
T KOG2096|consen 156 KLCVYKLVKKTDGSGSHHFVHIDNLEFERKHQVDIINIGIAGNAKYIMSASLDTKICLWDLK-GQLLQSIDTNQSSNYD- 233 (420)
T ss_pred EEEEEEeeecccCCCCcccccccccccchhcccceEEEeecCCceEEEEecCCCcEEEEecC-Cceeeeeccccccccc-
Confidence 899997742 221111 1 235555666555544 99999999999999998 8888888765443333
Q ss_pred EEEEcCCCCEEEEEECCCcEEEEeC---C-------cceeeeecccceEEEEEe--cCCEEEEEeCCCeEEEEecCCC--
Q 008820 429 VLSLTAVQHTLVVSHESGSIKVWRN---D-------KFMKSMQTHKGSVFAVFL--EGKWLFTGGWDKTVSVQELAGD-- 494 (552)
Q Consensus 429 ~~~~s~~~~~l~~g~~dg~i~iwd~---~-------~~~~~~~~h~~~v~~v~~--~~~~l~sgs~dg~i~iwd~~~~-- 494 (552)
.+.||+|+++++++-.-.|++|.. + ..+..+++|...|..++| +...+++.|.||++++||.+-.
T Consensus 234 -aavSP~GRFia~~gFTpDVkVwE~~f~kdG~fqev~rvf~LkGH~saV~~~aFsn~S~r~vtvSkDG~wriwdtdVrY~ 312 (420)
T KOG2096|consen 234 -AAVSPDGRFIAVSGFTPDVKVWEPIFTKDGTFQEVKRVFSLKGHQSAVLAAAFSNSSTRAVTVSKDGKWRIWDTDVRYE 312 (420)
T ss_pred -eeeCCCCcEEEEecCCCCceEEEEEeccCcchhhhhhhheeccchhheeeeeeCCCcceeEEEecCCcEEEeeccceEe
Confidence 689999999999999999999972 1 245678999999999988 7889999999999999998521
Q ss_pred -----eeeeeeccCCCcccCcceEEEEEeC-CeEEEEeCCCeEEEEEecC
Q 008820 495 -----EFEEDVIPTGAIPCGSVITALLYWQ-GKLFVGCADRTVKIALCNR 538 (552)
Q Consensus 495 -----~~~~~~~~~~~~~~~~~v~~l~~~~-~~l~s~s~Dg~v~iw~~~~ 538 (552)
+..........-....++ .+..+| +.++..+....++++..+.
T Consensus 313 ~~qDpk~Lk~g~~pl~aag~~p~-RL~lsP~g~~lA~s~gs~l~~~~se~ 361 (420)
T KOG2096|consen 313 AGQDPKILKEGSAPLHAAGSEPV-RLELSPSGDSLAVSFGSDLKVFASED 361 (420)
T ss_pred cCCCchHhhcCCcchhhcCCCce-EEEeCCCCcEEEeecCCceEEEEccc
Confidence 111111111111112233 677775 4566666666788887663
No 144
>KOG4378 consensus Nuclear protein COP1 [Signal transduction mechanisms]
Probab=99.84 E-value=9.7e-20 Score=170.50 Aligned_cols=204 Identities=15% Similarity=0.218 Sum_probs=171.7
Q ss_pred CCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCccccccccCCCce
Q 008820 262 GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWR 341 (552)
Q Consensus 262 ~~~l~s~s~dg~I~iwd~~~~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~ 341 (552)
..++++|+..+.|+|||++...+.+.+++|...|+++.+...+. ++++++..|.|.+..+.++.....+....+ .
T Consensus 91 S~y~~sgG~~~~Vkiwdl~~kl~hr~lkdh~stvt~v~YN~~De-yiAsvs~gGdiiih~~~t~~~tt~f~~~sg----q 165 (673)
T KOG4378|consen 91 SLYEISGGQSGCVKIWDLRAKLIHRFLKDHQSTVTYVDYNNTDE-YIASVSDGGDIIIHGTKTKQKTTTFTIDSG----Q 165 (673)
T ss_pred ceeeeccCcCceeeehhhHHHHHhhhccCCcceeEEEEecCCcc-eeEEeccCCcEEEEecccCccccceecCCC----C
Confidence 68999999999999999998888888999999999999987655 789999999999999987765554443322 2
Q ss_pred eeeEEEEeeCCC-EEEEeeCCCcEEEEECCCCceeEEe-cCCCCCeEEEEEe---CCEEEEEeCCCcEEEEECCCCceeE
Q 008820 342 YSGIHALTTSGR-YLYTGSGDRTIKAWSLLDGTLSCTM-SGHKSAVSTLAVC---NGVLYSGSRDGTIRLWSLSDHSLLT 416 (552)
Q Consensus 342 ~~~~~~~~~~~~-~l~sgs~dg~i~iwd~~~~~~~~~~-~~h~~~v~~l~~~---~~~l~s~~~dg~i~iwd~~~~~~~~ 416 (552)
......+++..+ +|.+++.+|.|.+||+....++..+ ..|..+...++|+ +.+|++.+.|..|.+||.+..+...
T Consensus 166 svRll~ys~skr~lL~~asd~G~VtlwDv~g~sp~~~~~~~HsAP~~gicfspsne~l~vsVG~Dkki~~yD~~s~~s~~ 245 (673)
T KOG4378|consen 166 SVRLLRYSPSKRFLLSIASDKGAVTLWDVQGMSPIFHASEAHSAPCRGICFSPSNEALLVSVGYDKKINIYDIRSQASTD 245 (673)
T ss_pred eEEEeecccccceeeEeeccCCeEEEEeccCCCcccchhhhccCCcCcceecCCccceEEEecccceEEEeecccccccc
Confidence 234567777766 7888999999999999887777655 6799999999999 2389999999999999999888877
Q ss_pred EEecCCCCceEEEEEEcCCCCEEEEEECCCcEEEEeCC---cceeeeecccceEEEEEec
Q 008820 417 VLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRND---KFMKSMQTHKGSVFAVFLE 473 (552)
Q Consensus 417 ~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~---~~~~~~~~h~~~v~~v~~~ 473 (552)
.+...++ ... ++|+++|.+|+.|...|.|..||++ .++..+..|...|++++|.
T Consensus 246 ~l~y~~P--lst-vaf~~~G~~L~aG~s~G~~i~YD~R~~k~Pv~v~sah~~sVt~vafq 302 (673)
T KOG4378|consen 246 RLTYSHP--LST-VAFSECGTYLCAGNSKGELIAYDMRSTKAPVAVRSAHDASVTRVAFQ 302 (673)
T ss_pred eeeecCC--cce-eeecCCceEEEeecCCceEEEEecccCCCCceEeeecccceeEEEee
Confidence 7776543 333 7999999999999999999999976 5788899999999999983
No 145
>KOG2445 consensus Nuclear pore complex component (sc Seh1) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.84 E-value=9e-19 Score=154.93 Aligned_cols=245 Identities=15% Similarity=0.178 Sum_probs=168.1
Q ss_pred eCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCcc-ccccccCCCceeeeEEEEee-CCCEEEEeeCCCcEEE
Q 008820 289 KGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEP-LKKWNEEKDWRYSGIHALTT-SGRYLYTGSGDRTIKA 366 (552)
Q Consensus 289 ~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~l~sgs~dg~i~i 366 (552)
.+|.+-|+++.|.+.|. .+++|+.|++|+|||.+....... ...+..+.. ....+...+| -|+.+++++.|+++.|
T Consensus 10 s~h~DlihdVs~D~~GR-RmAtCSsDq~vkI~d~~~~s~~W~~Ts~Wrah~~-Si~rV~WAhPEfGqvvA~cS~Drtv~i 87 (361)
T KOG2445|consen 10 SGHKDLIHDVSFDFYGR-RMATCSSDQTVKIWDSTSDSGTWSCTSSWRAHDG-SIWRVVWAHPEFGQVVATCSYDRTVSI 87 (361)
T ss_pred cCCcceeeeeeecccCc-eeeeccCCCcEEEEeccCCCCceEEeeeEEecCC-cEEEEEecCccccceEEEEecCCceee
Confidence 46889999999988665 669999999999999765544333 334444444 2333333334 4889999999999999
Q ss_pred EECCCC---------ceeEEecCCCCCeEEEEEeC---C-EEEEEeCCCcEEEEECCCCceeEEEecC-----------C
Q 008820 367 WSLLDG---------TLSCTMSGHKSAVSTLAVCN---G-VLYSGSRDGTIRLWSLSDHSLLTVLEED-----------S 422 (552)
Q Consensus 367 wd~~~~---------~~~~~~~~h~~~v~~l~~~~---~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~-----------~ 422 (552)
|.-... ....++....+.|+.+.|.+ + .+++++.||.+|||+.-..-.+...... .
T Consensus 88 WEE~~~~~~~~~~~Wv~~ttl~DsrssV~DV~FaP~hlGLklA~~~aDG~lRIYEA~dp~nLs~W~Lq~Ei~~~~~pp~~ 167 (361)
T KOG2445|consen 88 WEEQEKSEEAHGRRWVRRTTLVDSRSSVTDVKFAPKHLGLKLAAASADGILRIYEAPDPMNLSQWTLQHEIQNVIDPPGK 167 (361)
T ss_pred eeecccccccccceeEEEEEeecCCcceeEEEecchhcceEEEEeccCcEEEEEecCCccccccchhhhhhhhccCCccc
Confidence 975211 22345666788999999983 2 8999999999999987654332222111 0
Q ss_pred CCceEEEEEEcCC---CCEEEEEECC-----CcEEEEeCC----c--ceeeeecccceEEEEEe------cCCEEEEEeC
Q 008820 423 SGAVSSVLSLTAV---QHTLVVSHES-----GSIKVWRND----K--FMKSMQTHKGSVFAVFL------EGKWLFTGGW 482 (552)
Q Consensus 423 ~~~~~~~~~~s~~---~~~l~~g~~d-----g~i~iwd~~----~--~~~~~~~h~~~v~~v~~------~~~~l~sgs~ 482 (552)
......++.|++. ..+|++|+.+ +.++||... + .+..+.+|..+|++++| .-..|++++.
T Consensus 168 ~~~~~~CvsWn~sr~~~p~iAvgs~e~a~~~~~~~Iye~~e~~rKw~kva~L~d~~dpI~di~wAPn~Gr~y~~lAvA~k 247 (361)
T KOG2445|consen 168 NKQPCFCVSWNPSRMHEPLIAVGSDEDAPHLNKVKIYEYNENGRKWLKVAELPDHTDPIRDISWAPNIGRSYHLLAVATK 247 (361)
T ss_pred ccCcceEEeeccccccCceEEEEcccCCccccceEEEEecCCcceeeeehhcCCCCCcceeeeeccccCCceeeEEEeec
Confidence 1112233566654 3578888765 578898633 2 34567789999999987 3458999999
Q ss_pred CCeEEEEecCCCe----------------eeeeeccCCCcccCcceEEEEEe--CCeEEEEeCCCeEEEEEec
Q 008820 483 DKTVSVQELAGDE----------------FEEDVIPTGAIPCGSVITALLYW--QGKLFVGCADRTVKIALCN 537 (552)
Q Consensus 483 dg~i~iwd~~~~~----------------~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~s~Dg~v~iw~~~ 537 (552)
|| |+||.+.... +.... ....-.|.+.|..+.|+ ...|.+.|.||.||+|+.+
T Consensus 248 Dg-v~I~~v~~~~s~i~~ee~~~~~~~~~l~v~~-vs~~~~H~~~VWrv~wNmtGtiLsStGdDG~VRLWkan 318 (361)
T KOG2445|consen 248 DG-VRIFKVKVARSAIEEEEVLAPDLMTDLPVEK-VSELDDHNGEVWRVRWNMTGTILSSTGDDGCVRLWKAN 318 (361)
T ss_pred Cc-EEEEEEeeccchhhhhcccCCCCccccceEE-eeeccCCCCceEEEEEeeeeeEEeecCCCceeeehhhh
Confidence 99 9999987421 00000 01112357789999998 3458889999999999865
No 146
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=99.84 E-value=1.3e-17 Score=161.52 Aligned_cols=249 Identities=13% Similarity=0.134 Sum_probs=172.5
Q ss_pred EEEEeecCccceEEEEEc--CCEE-EEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEE
Q 008820 244 KFKDLQGHRDCVTGLAVG--GGFL-FSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVW 320 (552)
Q Consensus 244 ~~~~l~~H~~~V~~l~~s--~~~l-~s~s~dg~I~iwd~~~~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vw 320 (552)
.+..+.+|.. +.+++|+ ++.+ ++++.++.|++||..+++....+..+.. +..++|+|+++.++++++.|+.+++|
T Consensus 23 ~~~~~~~~~~-~~~l~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~-~~~~~~~~~g~~l~~~~~~~~~l~~~ 100 (300)
T TIGR03866 23 VTRTFPVGQR-PRGITLSKDGKLLYVCASDSDTIQVIDLATGEVIGTLPSGPD-PELFALHPNGKILYIANEDDNLVTVI 100 (300)
T ss_pred eEEEEECCCC-CCceEECCCCCEEEEEECCCCeEEEEECCCCcEEEeccCCCC-ccEEEECCCCCEEEEEcCCCCeEEEE
Confidence 3455555544 6788998 6665 6777899999999999988887765544 56788999888676777789999999
Q ss_pred eCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCC-cEEEEECCCCceeEEecCCCCCeEEEEEe-CC-EEE-
Q 008820 321 SFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDR-TIKAWSLLDGTLSCTMSGHKSAVSTLAVC-NG-VLY- 396 (552)
Q Consensus 321 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg-~i~iwd~~~~~~~~~~~~h~~~v~~l~~~-~~-~l~- 396 (552)
|+.+......+ ..... ....+++++++.+++++.++ .+..||.++++....+.. .....+++|+ ++ .++
T Consensus 101 d~~~~~~~~~~---~~~~~---~~~~~~~~dg~~l~~~~~~~~~~~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~ 173 (300)
T TIGR03866 101 DIETRKVLAEI---PVGVE---PEGMAVSPDGKIVVNTSETTNMAHFIDTKTYEIVDNVLV-DQRPRFAEFTADGKELWV 173 (300)
T ss_pred ECCCCeEEeEe---eCCCC---cceEEECCCCCEEEEEecCCCeEEEEeCCCCeEEEEEEc-CCCccEEEECCCCCEEEE
Confidence 99864322222 11111 12357889999998888765 467789988877665542 2345778888 43 554
Q ss_pred EEeCCCcEEEEECCCCceeEEEecCCC-----CceEEEEEEcCCCCEEEEE-ECCCcEEEEeCCcc--eeeeecccceEE
Q 008820 397 SGSRDGTIRLWSLSDHSLLTVLEEDSS-----GAVSSVLSLTAVQHTLVVS-HESGSIKVWRNDKF--MKSMQTHKGSVF 468 (552)
Q Consensus 397 s~~~dg~i~iwd~~~~~~~~~~~~~~~-----~~~~~~~~~s~~~~~l~~g-~~dg~i~iwd~~~~--~~~~~~h~~~v~ 468 (552)
++..++.|++||+++++.+..+..+.. ......+.++|++++++++ +.++.+.+||..+. ...+ .+...+.
T Consensus 174 ~~~~~~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~~~~~~~~~~~i~v~d~~~~~~~~~~-~~~~~~~ 252 (300)
T TIGR03866 174 SSEIGGTVSVIDVATRKVIKKITFEIPGVHPEAVQPVGIKLTKDGKTAFVALGPANRVAVVDAKTYEVLDYL-LVGQRVW 252 (300)
T ss_pred EcCCCCEEEEEEcCcceeeeeeeecccccccccCCccceEECCCCCEEEEEcCCCCeEEEEECCCCcEEEEE-EeCCCcc
Confidence 455699999999999987776643211 1111225789999986554 45678999997542 2222 2344566
Q ss_pred EEEe--cCCEEEEE-eCCCeEEEEecCCCeeeeeecc
Q 008820 469 AVFL--EGKWLFTG-GWDKTVSVQELAGDEFEEDVIP 502 (552)
Q Consensus 469 ~v~~--~~~~l~sg-s~dg~i~iwd~~~~~~~~~~~~ 502 (552)
++.| +|++|+++ +.+|.|++||+.+++....+..
T Consensus 253 ~~~~~~~g~~l~~~~~~~~~i~v~d~~~~~~~~~~~~ 289 (300)
T TIGR03866 253 QLAFTPDEKYLLTTNGVSNDVSVIDVAALKVIKSIKV 289 (300)
T ss_pred eEEECCCCCEEEEEcCCCCeEEEEECCCCcEEEEEEc
Confidence 6665 88998876 4689999999999877666543
No 147
>KOG0649 consensus WD40 repeat protein [General function prediction only]
Probab=99.84 E-value=3.8e-18 Score=146.05 Aligned_cols=269 Identities=19% Similarity=0.273 Sum_probs=185.9
Q ss_pred eEEEEEc--CCEEEEEeCCCcEEEEeCCC----------CeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeC
Q 008820 255 VTGLAVG--GGFLFSSSFDKSIHVWSLKD----------FSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSF 322 (552)
Q Consensus 255 V~~l~~s--~~~l~s~s~dg~I~iwd~~~----------~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~ 322 (552)
|.+-+++ +++|+.|..+|+|.+..+++ ...+-..++|.++|+.++|.. .+|++|+ ||.|+-|..
T Consensus 13 vf~qa~sp~~~~l~agn~~G~iav~sl~sl~s~sa~~~gk~~iv~eqahdgpiy~~~f~d---~~Lls~g-dG~V~gw~W 88 (325)
T KOG0649|consen 13 VFAQAISPSKQYLFAGNLFGDIAVLSLKSLDSGSAEPPGKLKIVPEQAHDGPIYYLAFHD---DFLLSGG-DGLVYGWEW 88 (325)
T ss_pred HHHHhhCCcceEEEEecCCCeEEEEEehhhhccccCCCCCcceeeccccCCCeeeeeeeh---hheeecc-CceEEEeee
Confidence 4444555 88999999999999998753 233455689999999999973 3556665 499999988
Q ss_pred CCCCCCc-cccccccCCC-------ceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe--C
Q 008820 323 SFPLGHE-PLKKWNEEKD-------WRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC--N 392 (552)
Q Consensus 323 ~~~~~~~-~~~~~~~~~~-------~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~ 392 (552)
+...... ....+..... ........+.|..+-++.++.|+.++.||+++|+...++++|++.|.++.-. +
T Consensus 89 ~E~~es~~~K~lwe~~~P~~~~~~evPeINam~ldP~enSi~~AgGD~~~y~~dlE~G~i~r~~rGHtDYvH~vv~R~~~ 168 (325)
T KOG0649|consen 89 NEEEESLATKRLWEVKIPMQVDAVEVPEINAMWLDPSENSILFAGGDGVIYQVDLEDGRIQREYRGHTDYVHSVVGRNAN 168 (325)
T ss_pred hhhhhhccchhhhhhcCccccCcccCCccceeEeccCCCcEEEecCCeEEEEEEecCCEEEEEEcCCcceeeeeeecccC
Confidence 7543311 1111111111 1112233556666677777799999999999999999999999999999884 6
Q ss_pred CEEEEEeCCCcEEEEECCCCceeEEEecCCCC------ceEEEEEEcCCCCEEEEEECCCcEEEEeCCc--ceeeeeccc
Q 008820 393 GVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSG------AVSSVLSLTAVQHTLVVSHESGSIKVWRNDK--FMKSMQTHK 464 (552)
Q Consensus 393 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~------~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~~--~~~~~~~h~ 464 (552)
+.+++|++||++|+||.++++.+..+...... .-.-+.+..-+..++++|+ ...+.+|.++. +...+. -.
T Consensus 169 ~qilsG~EDGtvRvWd~kt~k~v~~ie~yk~~~~lRp~~g~wigala~~edWlvCGg-Gp~lslwhLrsse~t~vfp-ip 246 (325)
T KOG0649|consen 169 GQILSGAEDGTVRVWDTKTQKHVSMIEPYKNPNLLRPDWGKWIGALAVNEDWLVCGG-GPKLSLWHLRSSESTCVFP-IP 246 (325)
T ss_pred cceeecCCCccEEEEeccccceeEEeccccChhhcCcccCceeEEEeccCceEEecC-CCceeEEeccCCCceEEEe-cc
Confidence 69999999999999999999998887643211 1111245566677888775 45799999774 333332 34
Q ss_pred ceEEEEEecCCEEEEEeCCCeEEEEecCCCeeeeeeccCCCcccCcceEEEEEe--CCe-EEEEeCCCeEEEEE
Q 008820 465 GSVFAVFLEGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYW--QGK-LFVGCADRTVKIAL 535 (552)
Q Consensus 465 ~~v~~v~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~-l~s~s~Dg~v~iw~ 535 (552)
+++..+.|..+.+++++..+.|.-|.+.+. +.... +.. ...+.+..++ |=. +-.++....+.|+.
T Consensus 247 a~v~~v~F~~d~vl~~G~g~~v~~~~l~Gv-l~a~i-p~~----s~~c~s~s~~~~p~k~~s~ag~s~~~~i~~ 314 (325)
T KOG0649|consen 247 ARVHLVDFVDDCVLIGGEGNHVQSYTLNGV-LQANI-PVE----STACYSASWQTSPIKFISIAGFSNKLHILK 314 (325)
T ss_pred cceeEeeeecceEEEeccccceeeeeeccE-EEEec-cCC----ccceeeecccCCceEEEEecccceeeeeee
Confidence 566778898999999999899999998753 22221 111 3345566665 433 44577777887764
No 148
>KOG4283 consensus Transcription-coupled repair protein CSA, contains WD40 domain [Transcription; Replication, recombination and repair]
Probab=99.84 E-value=1.5e-18 Score=152.56 Aligned_cols=204 Identities=18% Similarity=0.279 Sum_probs=159.1
Q ss_pred eCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCc---------c--ccccccCCCceeeeEEEEeeCCCEEEE
Q 008820 289 KGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHE---------P--LKKWNEEKDWRYSGIHALTTSGRYLYT 357 (552)
Q Consensus 289 ~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~---------~--~~~~~~~~~~~~~~~~~~~~~~~~l~s 357 (552)
..|.+.|+++..-+..+.++++|+.||.|.+||++...... + -+.....+......+..+..|...+.+
T Consensus 40 r~HgGsvNsL~id~tegrymlSGgadgsi~v~Dl~n~t~~e~s~li~k~~c~v~~~h~~~Hky~iss~~WyP~DtGmFts 119 (397)
T KOG4283|consen 40 RPHGGSVNSLQIDLTEGRYMLSGGADGSIAVFDLQNATDYEASGLIAKHKCIVAKQHENGHKYAISSAIWYPIDTGMFTS 119 (397)
T ss_pred ccCCCccceeeeccccceEEeecCCCccEEEEEeccccchhhccceeheeeeccccCCccceeeeeeeEEeeecCceeec
Confidence 46889999999999999999999999999999998644111 1 111122223344445556667779999
Q ss_pred eeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe-----CCEEEEEeCCCcEEEEECCCCceeEEEecCCCCceEEEEEE
Q 008820 358 GSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC-----NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSL 432 (552)
Q Consensus 358 gs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~-----~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 432 (552)
++.|.++++||.++.+....|+ ..+.|.+-+++ .-++++|..|-.|++.|+.+|...+++.+|.. .+.. +.|
T Consensus 120 sSFDhtlKVWDtnTlQ~a~~F~-me~~VYshamSp~a~sHcLiA~gtr~~~VrLCDi~SGs~sH~LsGHr~-~vla-V~W 196 (397)
T KOG4283|consen 120 SSFDHTLKVWDTNTLQEAVDFK-MEGKVYSHAMSPMAMSHCLIAAGTRDVQVRLCDIASGSFSHTLSGHRD-GVLA-VEW 196 (397)
T ss_pred ccccceEEEeecccceeeEEee-cCceeehhhcChhhhcceEEEEecCCCcEEEEeccCCcceeeeccccC-ceEE-EEe
Confidence 9999999999999998888776 45667776666 23788899999999999999999999998854 4454 578
Q ss_pred cCCCC-EEEEEECCCcEEEEeCCc---cee--------------eeecccceEEEEEe--cCCEEEEEeCCCeEEEEecC
Q 008820 433 TAVQH-TLVVSHESGSIKVWRNDK---FMK--------------SMQTHKGSVFAVFL--EGKWLFTGGWDKTVSVQELA 492 (552)
Q Consensus 433 s~~~~-~l~~g~~dg~i~iwd~~~---~~~--------------~~~~h~~~v~~v~~--~~~~l~sgs~dg~i~iwd~~ 492 (552)
+|... .|++|+.||.|++||+++ +.. .-..|.+.+..++| ++.++++.+.|..+++|+..
T Consensus 197 sp~~e~vLatgsaDg~irlWDiRrasgcf~~lD~hn~k~~p~~~~n~ah~gkvngla~tSd~~~l~~~gtd~r~r~wn~~ 276 (397)
T KOG4283|consen 197 SPSSEWVLATGSADGAIRLWDIRRASGCFRVLDQHNTKRPPILKTNTAHYGKVNGLAWTSDARYLASCGTDDRIRVWNME 276 (397)
T ss_pred ccCceeEEEecCCCceEEEEEeecccceeEEeecccCccCccccccccccceeeeeeecccchhhhhccCccceEEeecc
Confidence 88765 577899999999999763 222 22457788899988 89999999999999999998
Q ss_pred CCe
Q 008820 493 GDE 495 (552)
Q Consensus 493 ~~~ 495 (552)
+++
T Consensus 277 ~G~ 279 (397)
T KOG4283|consen 277 SGR 279 (397)
T ss_pred cCc
Confidence 664
No 149
>KOG1034 consensus Transcriptional repressor EED/ESC/FIE, required for transcriptional silencing, WD repeat superfamily [Transcription]
Probab=99.83 E-value=1.3e-18 Score=155.30 Aligned_cols=282 Identities=15% Similarity=0.228 Sum_probs=193.4
Q ss_pred eecCccceEEEEEc-------CCEEEEEeCCCcEEEEeCCCC---eEEEEEe--CCCCCeEEEEEecC---CCCEEEEEc
Q 008820 248 LQGHRDCVTGLAVG-------GGFLFSSSFDKSIHVWSLKDF---SHVHTFK--GHDHKVMAVVYVDE---DQPLCISGD 312 (552)
Q Consensus 248 l~~H~~~V~~l~~s-------~~~l~s~s~dg~I~iwd~~~~---~~~~~~~--~h~~~v~~v~~~~~---~~~~l~s~~ 312 (552)
.++|..+|..++|+ .+.+++++.+ .+.+|..... +.++++. .|......++|+-+ ++.++++++
T Consensus 34 ~ed~~~~I~gv~fN~~~~~~e~~vfatvG~~-rvtiy~c~~d~~ir~lq~y~D~d~~Esfytcsw~yd~~~~~p~la~~G 112 (385)
T KOG1034|consen 34 KEDHNKPIFGVAFNSFLGCDEPQVFATVGGN-RVTIYECPGDGGIRLLQSYADEDHDESFYTCSWSYDSNTGNPFLAAGG 112 (385)
T ss_pred hccCCCccceeeeehhcCCCCCceEEEeCCc-EEEEEEECCccceeeeeeccCCCCCcceEEEEEEecCCCCCeeEEeec
Confidence 56889999999998 4667777765 6888887543 3334432 37778888998743 456889999
Q ss_pred CCCcEEEEeCCCCCCCccccccccCCCceeeeEEEEee-CCCEEEEeeCCCcEEEEECCCCceeEEe---cCCCCCeEEE
Q 008820 313 SGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTT-SGRYLYTGSGDRTIKAWSLLDGTLSCTM---SGHKSAVSTL 388 (552)
Q Consensus 313 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~sgs~dg~i~iwd~~~~~~~~~~---~~h~~~v~~l 388 (552)
.-|.|+|.|+.+.+....+..... ....+ .+.| .+++++++|.|.+|++|++++..++..+ .+|.+.|.++
T Consensus 113 ~~GvIrVid~~~~~~~~~~~ghG~----sINei-k~~p~~~qlvls~SkD~svRlwnI~~~~Cv~VfGG~egHrdeVLSv 187 (385)
T KOG1034|consen 113 YLGVIRVIDVVSGQCSKNYRGHGG----SINEI-KFHPDRPQLVLSASKDHSVRLWNIQTDVCVAVFGGVEGHRDEVLSV 187 (385)
T ss_pred ceeEEEEEecchhhhccceeccCc----cchhh-hcCCCCCcEEEEecCCceEEEEeccCCeEEEEecccccccCcEEEE
Confidence 999999999987765555444322 22222 3344 4569999999999999999999999887 5799999999
Q ss_pred EEe--CCEEEEEeCCCcEEEEECCCCceeEEEe------cCCC-Cce----EE-----EEEEc--------CCCCEEEEE
Q 008820 389 AVC--NGVLYSGSRDGTIRLWSLSDHSLLTVLE------EDSS-GAV----SS-----VLSLT--------AVQHTLVVS 442 (552)
Q Consensus 389 ~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~------~~~~-~~~----~~-----~~~~s--------~~~~~l~~g 442 (552)
.|+ +.++++++.|.+|++|++...+....++ .... .+. .. ....+ --|+++++-
T Consensus 188 D~~~~gd~i~ScGmDhslk~W~l~~~~f~~~lE~s~~~~~~~t~~pfpt~~~~fp~fst~diHrnyVDCvrw~gd~ilSk 267 (385)
T KOG1034|consen 188 DFSLDGDRIASCGMDHSLKLWRLNVKEFKNKLELSITYSPNKTTRPFPTPKTHFPDFSTTDIHRNYVDCVRWFGDFILSK 267 (385)
T ss_pred EEcCCCCeeeccCCcceEEEEecChhHHhhhhhhhcccCCCCccCcCCccccccccccccccccchHHHHHHHhhheeec
Confidence 999 4599999999999999998433211111 0000 000 00 00111 125788888
Q ss_pred ECCCcEEEEeCCccee----------------eeecccceEEEEEe----cCCEEEEEeCCCeEEEEecCCCeeeeeecc
Q 008820 443 HESGSIKVWRNDKFMK----------------SMQTHKGSVFAVFL----EGKWLFTGGWDKTVSVQELAGDEFEEDVIP 502 (552)
Q Consensus 443 ~~dg~i~iwd~~~~~~----------------~~~~h~~~v~~v~~----~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~ 502 (552)
+.++.|..|..++... .+......+.-+.| -++.|+.|...|.|++||++.........
T Consensus 268 scenaI~~w~pgkl~e~~~~vkp~es~~Ti~~~~~~~~c~iWfirf~~d~~~~~la~gnq~g~v~vwdL~~~ep~~~tt- 346 (385)
T KOG1034|consen 268 SCENAIVCWKPGKLEESIHNVKPPESATTILGEFDYPMCDIWFIRFAFDPWQKMLALGNQSGKVYVWDLDNNEPPKCTT- 346 (385)
T ss_pred ccCceEEEEecchhhhhhhccCCCccceeeeeEeccCccceEEEEEeecHHHHHHhhccCCCcEEEEECCCCCCccCce-
Confidence 8899999998653221 12222333333333 57899999999999999998765432111
Q ss_pred CCCcccCcceEEEEEe-CCe-EEEEeCCCeEEEEEe
Q 008820 503 TGAIPCGSVITALLYW-QGK-LFVGCADRTVKIALC 536 (552)
Q Consensus 503 ~~~~~~~~~v~~l~~~-~~~-l~s~s~Dg~v~iw~~ 536 (552)
.........|...+|+ ++. |+..++|++|.-||.
T Consensus 347 l~~s~~~~tVRQ~sfS~dgs~lv~vcdd~~Vwrwdr 382 (385)
T KOG1034|consen 347 LTHSKSGSTVRQTSFSRDGSILVLVCDDGTVWRWDR 382 (385)
T ss_pred EEeccccceeeeeeecccCcEEEEEeCCCcEEEEEe
Confidence 1122336779999999 444 778899999998885
No 150
>KOG0307 consensus Vesicle coat complex COPII, subunit SEC31 [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.83 E-value=8.7e-20 Score=187.53 Aligned_cols=264 Identities=17% Similarity=0.243 Sum_probs=199.0
Q ss_pred eCCCcEEEEeCCC--Ce----EEEEEeCCCCCeEEEEEecCCCC---EEEEEcCCCcEEEEeCCC---CCCCcccccccc
Q 008820 269 SFDKSIHVWSLKD--FS----HVHTFKGHDHKVMAVVYVDEDQP---LCISGDSGGGIFVWSFSF---PLGHEPLKKWNE 336 (552)
Q Consensus 269 s~dg~I~iwd~~~--~~----~~~~~~~h~~~v~~v~~~~~~~~---~l~s~~~dg~i~vwd~~~---~~~~~~~~~~~~ 336 (552)
+.+.++-||.+.. .. .+..+. -....+.++|.+.+.. +++.|..||.|.+||... +.....+.....
T Consensus 36 st~~slEifeld~~~~~~dlk~~~s~~-s~~rF~kL~W~~~g~~~~GlIaGG~edG~I~ly~p~~~~~~~~~~~la~~~~ 114 (1049)
T KOG0307|consen 36 STSASLEIFELDFSDESSDLKPVGSLQ-SSNRFNKLAWGSYGSHSHGLIAGGLEDGNIVLYDPASIIANASEEVLATKSK 114 (1049)
T ss_pred ccccccceeeecccCcccccccccccc-ccccceeeeecccCCCccceeeccccCCceEEecchhhccCcchHHHhhhcc
Confidence 4455666665532 22 223332 3456789999887766 689999999999999876 333334444444
Q ss_pred CCCceeeeEEEEeeC-CCEEEEeeCCCcEEEEECCCCceeEEec--CCCCCeEEEEEe---CCEEEEEeCCCcEEEEECC
Q 008820 337 EKDWRYSGIHALTTS-GRYLYTGSGDRTIKAWSLLDGTLSCTMS--GHKSAVSTLAVC---NGVLYSGSRDGTIRLWSLS 410 (552)
Q Consensus 337 ~~~~~~~~~~~~~~~-~~~l~sgs~dg~i~iwd~~~~~~~~~~~--~h~~~v~~l~~~---~~~l~s~~~dg~i~iwd~~ 410 (552)
|++ .+.. ..|++. ++.+++|+.||.|.|||+++-+...+.. ...+.|.+++|+ ...|++++.+|.+.|||++
T Consensus 115 h~G-~V~g-LDfN~~q~nlLASGa~~geI~iWDlnn~~tP~~~~~~~~~~eI~~lsWNrkvqhILAS~s~sg~~~iWDlr 192 (1049)
T KOG0307|consen 115 HTG-PVLG-LDFNPFQGNLLASGADDGEILIWDLNKPETPFTPGSQAPPSEIKCLSWNRKVSHILASGSPSGRAVIWDLR 192 (1049)
T ss_pred cCC-ceee-eeccccCCceeeccCCCCcEEEeccCCcCCCCCCCCCCCcccceEeccchhhhHHhhccCCCCCceecccc
Confidence 444 3333 456654 5599999999999999998765544442 245789999999 3489999999999999999
Q ss_pred CCceeEEEecCCCCceEEEEEEcCCCC-EEEEEECC---CcEEEEeCC---cceeeeecccceEEEEEe---cCCEEEEE
Q 008820 411 DHSLLTVLEEDSSGAVSSVLSLTAVQH-TLVVSHES---GSIKVWRND---KFMKSMQTHKGSVFAVFL---EGKWLFTG 480 (552)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~s~~~~-~l~~g~~d---g~i~iwd~~---~~~~~~~~h~~~v~~v~~---~~~~l~sg 480 (552)
..+.+..+..+......+.+.|+|+.. .+++++.| -.|.+||++ .+++.+++|...|.+++| |..+|+|+
T Consensus 193 ~~~pii~ls~~~~~~~~S~l~WhP~~aTql~~As~dd~~PviqlWDlR~assP~k~~~~H~~GilslsWc~~D~~lllSs 272 (1049)
T KOG0307|consen 193 KKKPIIKLSDTPGRMHCSVLAWHPDHATQLLVASGDDSAPVIQLWDLRFASSPLKILEGHQRGILSLSWCPQDPRLLLSS 272 (1049)
T ss_pred CCCcccccccCCCccceeeeeeCCCCceeeeeecCCCCCceeEeecccccCCchhhhcccccceeeeccCCCCchhhhcc
Confidence 998888777665545566689999864 45566554 368999976 478889999999999998 77899999
Q ss_pred eCCCeEEEEecCCCeeeeeeccCCCcccCcceEEEEEeC---CeEEEEeCCCeEEEEEecCCc
Q 008820 481 GWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQ---GKLFVGCADRTVKIALCNRQI 540 (552)
Q Consensus 481 s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~~---~~l~s~s~Dg~v~iw~~~~~~ 540 (552)
+.|+.|.+|+.++++....+... ...+..+.|.+ +.+++++-||.|.|+.+....
T Consensus 273 gkD~~ii~wN~~tgEvl~~~p~~-----~nW~fdv~w~pr~P~~~A~asfdgkI~I~sl~~~~ 330 (1049)
T KOG0307|consen 273 GKDNRIICWNPNTGEVLGELPAQ-----GNWCFDVQWCPRNPSVMAAASFDGKISIYSLQGTD 330 (1049)
T ss_pred cCCCCeeEecCCCceEeeecCCC-----CcceeeeeecCCCcchhhhheeccceeeeeeecCC
Confidence 99999999999998887765553 66799999994 679999999999999987433
No 151
>KOG1034 consensus Transcriptional repressor EED/ESC/FIE, required for transcriptional silencing, WD repeat superfamily [Transcription]
Probab=99.82 E-value=6.2e-19 Score=157.26 Aligned_cols=241 Identities=16% Similarity=0.195 Sum_probs=183.8
Q ss_pred cCccceEEEEEc------CCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCC
Q 008820 250 GHRDCVTGLAVG------GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFS 323 (552)
Q Consensus 250 ~H~~~V~~l~~s------~~~l~s~s~dg~I~iwd~~~~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~ 323 (552)
.|...-..++|+ ..++|.|+.-|.|||.|+.++++...+.+|...|+.+.+.|...++++++|.|.+|++|+++
T Consensus 87 d~~Esfytcsw~yd~~~~~p~la~~G~~GvIrVid~~~~~~~~~~~ghG~sINeik~~p~~~qlvls~SkD~svRlwnI~ 166 (385)
T KOG1034|consen 87 DHDESFYTCSWSYDSNTGNPFLAAGGYLGVIRVIDVVSGQCSKNYRGHGGSINEIKFHPDRPQLVLSASKDHSVRLWNIQ 166 (385)
T ss_pred CCCcceEEEEEEecCCCCCeeEEeecceeEEEEEecchhhhccceeccCccchhhhcCCCCCcEEEEecCCceEEEEecc
Confidence 477888888887 56899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCce------e----------------E-----
Q 008820 324 FPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTL------S----------------C----- 376 (552)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~------~----------------~----- 376 (552)
+......+....+|..... ...++.++.+|++++.|.++++|++...+. . .
T Consensus 167 ~~~Cv~VfGG~egHrdeVL--SvD~~~~gd~i~ScGmDhslk~W~l~~~~f~~~lE~s~~~~~~~t~~pfpt~~~~fp~f 244 (385)
T KOG1034|consen 167 TDVCVAVFGGVEGHRDEVL--SVDFSLDGDRIASCGMDHSLKLWRLNVKEFKNKLELSITYSPNKTTRPFPTPKTHFPDF 244 (385)
T ss_pred CCeEEEEecccccccCcEE--EEEEcCCCCeeeccCCcceEEEEecChhHHhhhhhhhcccCCCCccCcCCccccccccc
Confidence 8877666666666655321 135677888999999999999999973210 0 0
Q ss_pred -EecCCCCCeEEEEEeCCEEEEEeCCCcEEEEECC-CCce-------------eEEEecCCCCceEEEEEEcCCCCEEEE
Q 008820 377 -TMSGHKSAVSTLAVCNGVLYSGSRDGTIRLWSLS-DHSL-------------LTVLEEDSSGAVSSVLSLTAVQHTLVV 441 (552)
Q Consensus 377 -~~~~h~~~v~~l~~~~~~l~s~~~dg~i~iwd~~-~~~~-------------~~~~~~~~~~~~~~~~~~s~~~~~l~~ 441 (552)
+-.-|...|-|+.|-++++++=|-++.|..|-.. -.+. +..+.........-..++.+-++.|+.
T Consensus 245 st~diHrnyVDCvrw~gd~ilSkscenaI~~w~pgkl~e~~~~vkp~es~~Ti~~~~~~~~c~iWfirf~~d~~~~~la~ 324 (385)
T KOG1034|consen 245 STTDIHRNYVDCVRWFGDFILSKSCENAIVCWKPGKLEESIHNVKPPESATTILGEFDYPMCDIWFIRFAFDPWQKMLAL 324 (385)
T ss_pred cccccccchHHHHHHHhhheeecccCceEEEEecchhhhhhhccCCCccceeeeeEeccCccceEEEEEeecHHHHHHhh
Confidence 1134778888888889999999999999999872 1221 222222222222223567788899999
Q ss_pred EECCCcEEEEeCCcce---e-eeec--ccceEEEEEe--cCCEEEEEeCCCeEEEEecC
Q 008820 442 SHESGSIKVWRNDKFM---K-SMQT--HKGSVFAVFL--EGKWLFTGGWDKTVSVQELA 492 (552)
Q Consensus 442 g~~dg~i~iwd~~~~~---~-~~~~--h~~~v~~v~~--~~~~l~sgs~dg~i~iwd~~ 492 (552)
|...|.|++||++... . ++.. ....|...++ |+..|+....|++|.-||..
T Consensus 325 gnq~g~v~vwdL~~~ep~~~ttl~~s~~~~tVRQ~sfS~dgs~lv~vcdd~~Vwrwdrv 383 (385)
T KOG1034|consen 325 GNQSGKVYVWDLDNNEPPKCTTLTHSKSGSTVRQTSFSRDGSILVLVCDDGTVWRWDRV 383 (385)
T ss_pred ccCCCcEEEEECCCCCCccCceEEeccccceeeeeeecccCcEEEEEeCCCcEEEEEee
Confidence 9999999999976421 1 2221 1235555555 99999999999999999864
No 152
>KOG0639 consensus Transducin-like enhancer of split protein (contains WD40 repeats) [Chromatin structure and dynamics]
Probab=99.82 E-value=4e-19 Score=166.63 Aligned_cols=247 Identities=21% Similarity=0.296 Sum_probs=189.3
Q ss_pred CCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEEC
Q 008820 290 GHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSL 369 (552)
Q Consensus 290 ~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~ 369 (552)
.|.+-|.++.++.. ...+++|+. |.|+|||+.......++..+...........+.+.+||+.|++|+.-.++.|||+
T Consensus 417 ~HGEvVcAvtIS~~-trhVyTgGk-gcVKVWdis~pg~k~PvsqLdcl~rdnyiRSckL~pdgrtLivGGeastlsiWDL 494 (705)
T KOG0639|consen 417 AHGEVVCAVTISNP-TRHVYTGGK-GCVKVWDISQPGNKSPVSQLDCLNRDNYIRSCKLLPDGRTLIVGGEASTLSIWDL 494 (705)
T ss_pred ccCcEEEEEEecCC-cceeEecCC-CeEEEeeccCCCCCCccccccccCcccceeeeEecCCCceEEeccccceeeeeec
Confidence 47777888888764 446677765 8999999998777777666665544455556688999999999999999999999
Q ss_pred CCCceeE--EecCCCCCeEEEEEe-C-CEEEEEeCCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEECC
Q 008820 370 LDGTLSC--TMSGHKSAVSTLAVC-N-GVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHES 445 (552)
Q Consensus 370 ~~~~~~~--~~~~h~~~v~~l~~~-~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~d 445 (552)
....+.. .+......+.+++.+ + +..++++.||.|.|||+.+...+..+.++..+. .+ +.++++|..|.+|+-|
T Consensus 495 AapTprikaeltssapaCyALa~spDakvcFsccsdGnI~vwDLhnq~~VrqfqGhtDGa-sc-Idis~dGtklWTGGlD 572 (705)
T KOG0639|consen 495 AAPTPRIKAELTSSAPACYALAISPDAKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGA-SC-IDISKDGTKLWTGGLD 572 (705)
T ss_pred cCCCcchhhhcCCcchhhhhhhcCCccceeeeeccCCcEEEEEcccceeeecccCCCCCc-ee-EEecCCCceeecCCCc
Confidence 7655433 333333456677777 3 488899999999999999999999999986654 33 6999999999999999
Q ss_pred CcEEEEeCCcceeeee-cccceEEEEE--ecCCEEEEEeCCCeEEEEecCCCeeeeeeccCCCcccCcceEEEEEe--CC
Q 008820 446 GSIKVWRNDKFMKSMQ-THKGSVFAVF--LEGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYW--QG 520 (552)
Q Consensus 446 g~i~iwd~~~~~~~~~-~h~~~v~~v~--~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~ 520 (552)
++|+.||+++..+..+ .....|.++. +++.+|+.|-.++.+-+-.....+....-. +.+.|.++.|. ..
T Consensus 573 ntvRcWDlregrqlqqhdF~SQIfSLg~cP~~dWlavGMens~vevlh~skp~kyqlhl------heScVLSlKFa~cGk 646 (705)
T KOG0639|consen 573 NTVRCWDLREGRQLQQHDFSSQIFSLGYCPTGDWLAVGMENSNVEVLHTSKPEKYQLHL------HESCVLSLKFAYCGK 646 (705)
T ss_pred cceeehhhhhhhhhhhhhhhhhheecccCCCccceeeecccCcEEEEecCCccceeecc------cccEEEEEEecccCc
Confidence 9999999886544332 2356777775 599999999999999888776553322211 26779999998 45
Q ss_pred eEEEEeCCCeEEEEEecCCcceeEEEe
Q 008820 521 KLFVGCADRTVKIALCNRQIPEIFSLL 547 (552)
Q Consensus 521 ~l~s~s~Dg~v~iw~~~~~~~~~~~~~ 547 (552)
.+++.+.|+.+..|... -+..+|+..
T Consensus 647 wfvStGkDnlLnawrtP-yGasiFqsk 672 (705)
T KOG0639|consen 647 WFVSTGKDNLLNAWRTP-YGASIFQSK 672 (705)
T ss_pred eeeecCchhhhhhccCc-cccceeecc
Confidence 69999999999999987 455555544
No 153
>KOG1188 consensus WD40 repeat protein [General function prediction only]
Probab=99.82 E-value=1.1e-18 Score=156.57 Aligned_cols=267 Identities=13% Similarity=0.174 Sum_probs=181.5
Q ss_pred CEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecC-CCCEEEEEcCCCcEEEEeCCCCCCCccccccccCCCce
Q 008820 263 GFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDE-DQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWR 341 (552)
Q Consensus 263 ~~l~s~s~dg~I~iwd~~~~~~~~~~~~h~~~v~~v~~~~~-~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~ 341 (552)
..+|++...|+|++||..+++.+..++++...++.+.|... +...+.+|+.||+|++||++.......+.. ..+.
T Consensus 41 ~~vav~lSngsv~lyd~~tg~~l~~fk~~~~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~e~a~~~~-~~~~--- 116 (376)
T KOG1188|consen 41 TAVAVSLSNGSVRLYDKGTGQLLEEFKGPPATTNGVRFISCDSPHGVISCSSDGTVRLWDIRSQAESARISW-TQQS--- 116 (376)
T ss_pred eeEEEEecCCeEEEEeccchhhhheecCCCCcccceEEecCCCCCeeEEeccCCeEEEEEeecchhhhheec-cCCC---
Confidence 56888888999999999999999999999999999999875 677899999999999999997654433332 2211
Q ss_pred eeeEEEEee--CCCEEEEeeC----CCcEEEEECCCCce-eEEe-cCCCCCeEEEEEe---CCEEEEEeCCCcEEEEECC
Q 008820 342 YSGIHALTT--SGRYLYTGSG----DRTIKAWSLLDGTL-SCTM-SGHKSAVSTLAVC---NGVLYSGSRDGTIRLWSLS 410 (552)
Q Consensus 342 ~~~~~~~~~--~~~~l~sgs~----dg~i~iwd~~~~~~-~~~~-~~h~~~v~~l~~~---~~~l~s~~~dg~i~iwd~~ 410 (552)
..+..++.. .++.+++|+. |-.|.+||++..+. +..+ ..|...|+++.|+ +++|++||.||-|.+||+.
T Consensus 117 ~~~f~~ld~nck~~ii~~GtE~~~s~A~v~lwDvR~~qq~l~~~~eSH~DDVT~lrFHP~~pnlLlSGSvDGLvnlfD~~ 196 (376)
T KOG1188|consen 117 GTPFICLDLNCKKNIIACGTELTRSDASVVLWDVRSEQQLLRQLNESHNDDVTQLRFHPSDPNLLLSGSVDGLVNLFDTK 196 (376)
T ss_pred CCcceEeeccCcCCeEEeccccccCceEEEEEEeccccchhhhhhhhccCcceeEEecCCCCCeEEeecccceEEeeecC
Confidence 122334444 4557777753 56799999997665 5444 6799999999999 5599999999999999997
Q ss_pred CCc----eeEEEecCCCCceEEEEEEcCCC-CEEEEEECCCcEEEEeCCcce--eeeec-------------ccceEEEE
Q 008820 411 DHS----LLTVLEEDSSGAVSSVLSLTAVQ-HTLVVSHESGSIKVWRNDKFM--KSMQT-------------HKGSVFAV 470 (552)
Q Consensus 411 ~~~----~~~~~~~~~~~~~~~~~~~s~~~-~~l~~g~~dg~i~iwd~~~~~--~~~~~-------------h~~~v~~v 470 (552)
... ++.++.. ...+.. +.|..++ +.|.+-+..++..+|++.... ..+.. -..-|.+.
T Consensus 197 ~d~EeDaL~~viN~--~sSI~~-igw~~~~ykrI~clTH~Etf~~~ele~~~~~~~~~~~~~~~~d~r~~~~~dY~I~~~ 273 (376)
T KOG1188|consen 197 KDNEEDALLHVINH--GSSIHL-IGWLSKKYKRIMCLTHMETFAIYELEDGSEETWLENPDVSADDLRKEDNCDYVINEH 273 (376)
T ss_pred CCcchhhHHHhhcc--cceeee-eeeecCCcceEEEEEccCceeEEEccCCChhhcccCccchhhhHHhhhhhhheeecc
Confidence 543 2333332 222344 4565554 568888899999999865321 11111 11233444
Q ss_pred Ee-cCCEEEEEeC-CCeEEEEecC---CCeeeeeeccCCCcccCcceEEEEEe--CCeEEEEeCCCeEEEEEec
Q 008820 471 FL-EGKWLFTGGW-DKTVSVQELA---GDEFEEDVIPTGAIPCGSVITALLYW--QGKLFVGCADRTVKIALCN 537 (552)
Q Consensus 471 ~~-~~~~l~sgs~-dg~i~iwd~~---~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~s~Dg~v~iw~~~ 537 (552)
.+ +...++.++. -|...++-+. ++......... ...+...|.++.|. ++.++||+.||.+.+|..+
T Consensus 274 ~~~~~~~~~l~g~~~n~~~~~~~~~~~s~~~~~~~a~l-~g~~~eiVR~i~~~~~~~~l~TGGEDG~l~~Wk~~ 346 (376)
T KOG1188|consen 274 SPGDKDTCALAGTDSNKGTIFPLVDTSSGSLLTEPAIL-QGGHEEIVRDILFDVKNDVLYTGGEDGLLQAWKVE 346 (376)
T ss_pred cCCCcceEEEeccccCceeEEEeeecccccccCccccc-cCCcHHHHHHHhhhcccceeeccCCCceEEEEecC
Confidence 45 5555555554 5666666544 22222111111 11125567888877 5679999999999999954
No 154
>KOG0302 consensus Ribosome Assembly protein [General function prediction only]
Probab=99.81 E-value=3.9e-19 Score=161.27 Aligned_cols=163 Identities=23% Similarity=0.413 Sum_probs=134.3
Q ss_pred EEEEeecCccceEEEEEc---CCEEEEEeCCCcEEEEeCCCCeEE---EEEeCCCCCeEEEEEecCCCCEEEEEcCCCcE
Q 008820 244 KFKDLQGHRDCVTGLAVG---GGFLFSSSFDKSIHVWSLKDFSHV---HTFKGHDHKVMAVVYVDEDQPLCISGDSGGGI 317 (552)
Q Consensus 244 ~~~~l~~H~~~V~~l~~s---~~~l~s~s~dg~I~iwd~~~~~~~---~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i 317 (552)
+++++.+|.+.=.+++|| ...|+||..-+.|++|...++.-. ..+.+|+..|..++|+|....+|++||.||+|
T Consensus 203 Pl~t~~ghk~EGy~LdWSp~~~g~LlsGDc~~~I~lw~~~~g~W~vd~~Pf~gH~~SVEDLqWSptE~~vfaScS~DgsI 282 (440)
T KOG0302|consen 203 PLFTFNGHKGEGYGLDWSPIKTGRLLSGDCVKGIHLWEPSTGSWKVDQRPFTGHTKSVEDLQWSPTEDGVFASCSCDGSI 282 (440)
T ss_pred ceEEecccCccceeeecccccccccccCccccceEeeeeccCceeecCccccccccchhhhccCCccCceEEeeecCceE
Confidence 345567899888999999 567899988899999999887543 34667999999999999999999999999999
Q ss_pred EEEeCCCCCCCccccccccCCCceeeeEEEEeeCCC--EEEEeeCCCcEEEEECCC---CceeEEecCCCCCeEEEEEe-
Q 008820 318 FVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGR--YLYTGSGDRTIKAWSLLD---GTLSCTMSGHKSAVSTLAVC- 391 (552)
Q Consensus 318 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~l~sgs~dg~i~iwd~~~---~~~~~~~~~h~~~v~~l~~~- 391 (552)
+|||++.+.....+.. ..+ ...+..++++.+ +|++|+.||+++|||+++ ++++..|+-|..+|+++.|+
T Consensus 283 rIWDiRs~~~~~~~~~-kAh----~sDVNVISWnr~~~lLasG~DdGt~~iwDLR~~~~~~pVA~fk~Hk~pItsieW~p 357 (440)
T KOG0302|consen 283 RIWDIRSGPKKAAVST-KAH----NSDVNVISWNRREPLLASGGDDGTLSIWDLRQFKSGQPVATFKYHKAPITSIEWHP 357 (440)
T ss_pred EEEEecCCCccceeEe-ecc----CCceeeEEccCCcceeeecCCCceEEEEEhhhccCCCcceeEEeccCCeeEEEecc
Confidence 9999998765555544 222 223445555544 899999999999999974 57889999999999999999
Q ss_pred --CCEEEEEeCCCcEEEEECCC
Q 008820 392 --NGVLYSGSRDGTIRLWSLSD 411 (552)
Q Consensus 392 --~~~l~s~~~dg~i~iwd~~~ 411 (552)
+..|++++.|..|.+||+..
T Consensus 358 ~e~s~iaasg~D~QitiWDlsv 379 (440)
T KOG0302|consen 358 HEDSVIAASGEDNQITIWDLSV 379 (440)
T ss_pred ccCceEEeccCCCcEEEEEeec
Confidence 45999999999999999964
No 155
>KOG1274 consensus WD40 repeat protein [General function prediction only]
Probab=99.81 E-value=1.2e-17 Score=167.80 Aligned_cols=260 Identities=16% Similarity=0.167 Sum_probs=203.9
Q ss_pred ccceeeecCcceEEEeeCCCeEEEEEe----------ecCccceEEEEEcCCEEEEEeCCCcEEEEeCCCCeEEEEEeCC
Q 008820 222 IDQARAAGGVKDLVNGLSKGNVKFKDL----------QGHRDCVTGLAVGGGFLFSSSFDKSIHVWSLKDFSHVHTFKGH 291 (552)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~l----------~~H~~~V~~l~~s~~~l~s~s~dg~I~iwd~~~~~~~~~~~~h 291 (552)
...+.+.+.+..+.+...++.+++|+- .-|...|.+++..+.+|++|+.+++|.+|...++..-..+...
T Consensus 16 ~t~i~~d~~gefi~tcgsdg~ir~~~~~sd~e~P~ti~~~g~~v~~ia~~s~~f~~~s~~~tv~~y~fps~~~~~iL~Rf 95 (933)
T KOG1274|consen 16 LTLICYDPDGEFICTCGSDGDIRKWKTNSDEEEPETIDISGELVSSIACYSNHFLTGSEQNTVLRYKFPSGEEDTILARF 95 (933)
T ss_pred eEEEEEcCCCCEEEEecCCCceEEeecCCcccCCchhhccCceeEEEeecccceEEeeccceEEEeeCCCCCccceeeee
Confidence 455677788889999999999999872 2277888899888889999999999999999988876666667
Q ss_pred CCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCC
Q 008820 292 DHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLD 371 (552)
Q Consensus 292 ~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~ 371 (552)
+-++.+++|+.++. +++.|+.|-.|++-+.........++.+... .....+.|.+++|++.+.||.|++||+.+
T Consensus 96 tlp~r~~~v~g~g~-~iaagsdD~~vK~~~~~D~s~~~~lrgh~ap-----Vl~l~~~p~~~fLAvss~dG~v~iw~~~~ 169 (933)
T KOG1274|consen 96 TLPIRDLAVSGSGK-MIAAGSDDTAVKLLNLDDSSQEKVLRGHDAP-----VLQLSYDPKGNFLAVSSCDGKVQIWDLQD 169 (933)
T ss_pred eccceEEEEecCCc-EEEeecCceeEEEEeccccchheeecccCCc-----eeeeeEcCCCCEEEEEecCceEEEEEccc
Confidence 78999999988555 7799999999999999877666555544332 12346778888999999999999999999
Q ss_pred CceeEEecCC--------CCCeEEEEEe--CCEEEEEeCCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEE
Q 008820 372 GTLSCTMSGH--------KSAVSTLAVC--NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVV 441 (552)
Q Consensus 372 ~~~~~~~~~h--------~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~ 441 (552)
+.+..++.+- ...+..++|+ ++.++..+.|+.|++|+..+......+.........+++.|+|+|.+||+
T Consensus 170 ~~~~~tl~~v~k~n~~~~s~i~~~~aW~Pk~g~la~~~~d~~Vkvy~r~~we~~f~Lr~~~~ss~~~~~~wsPnG~YiAA 249 (933)
T KOG1274|consen 170 GILSKTLTGVDKDNEFILSRICTRLAWHPKGGTLAVPPVDNTVKVYSRKGWELQFKLRDKLSSSKFSDLQWSPNGKYIAA 249 (933)
T ss_pred chhhhhcccCCccccccccceeeeeeecCCCCeEEeeccCCeEEEEccCCceeheeecccccccceEEEEEcCCCcEEee
Confidence 9877766431 3456778999 45999999999999999999998888877665555677899999999999
Q ss_pred EECCCcEEEEeCCcceeeeecccceEEEEEe--cCCEEEEEeCCCeEEEE
Q 008820 442 SHESGSIKVWRNDKFMKSMQTHKGSVFAVFL--EGKWLFTGGWDKTVSVQ 489 (552)
Q Consensus 442 g~~dg~i~iwd~~~~~~~~~~h~~~v~~v~~--~~~~l~sgs~dg~i~iw 489 (552)
++.||.|.|||..+... ......|++++| +...+-.-...|...+|
T Consensus 250 s~~~g~I~vWnv~t~~~--~~~~~~Vc~~aw~p~~n~it~~~~~g~~~~~ 297 (933)
T KOG1274|consen 250 STLDGQILVWNVDTHER--HEFKRAVCCEAWKPNANAITLITALGTLGVS 297 (933)
T ss_pred eccCCcEEEEecccchh--ccccceeEEEecCCCCCeeEEEeeccccccC
Confidence 99999999999876222 233457777777 55544444444444443
No 156
>KOG0290 consensus Conserved WD40 repeat-containing protein AN11 [Function unknown]
Probab=99.81 E-value=2.1e-17 Score=145.16 Aligned_cols=283 Identities=15% Similarity=0.159 Sum_probs=192.2
Q ss_pred eEEEEEeecCccceEEEEEc-----CCEEEEEeC----CCcEEEEeCC--CCeEEEEE-eCCCCCeEEEEEecCCC----
Q 008820 242 NVKFKDLQGHRDCVTGLAVG-----GGFLFSSSF----DKSIHVWSLK--DFSHVHTF-KGHDHKVMAVVYVDEDQ---- 305 (552)
Q Consensus 242 ~~~~~~l~~H~~~V~~l~~s-----~~~l~s~s~----dg~I~iwd~~--~~~~~~~~-~~h~~~v~~v~~~~~~~---- 305 (552)
...+..+..+ -++.++.|+ +.+|+.|+. .+.|.|-.+. +++.+..- ..|.-+++.+.|.|+..
T Consensus 35 ~~eiy~Y~ap-~~lya~~Ws~~~~~~~rla~gS~~Ee~~Nkvqiv~ld~~s~e~~~~a~fd~~YP~tK~~wiPd~~g~~p 113 (364)
T KOG0290|consen 35 RKEIYTYNAP-WPLYAMNWSVRPDKKFRLAVGSFIEEYNNKVQIVQLDEDSGELVEDANFDHPYPVTKLMWIPDSKGVYP 113 (364)
T ss_pred cceEEEecCC-CceeeeccccCCCcceeEEEeeeccccCCeeEEEEEccCCCceeccCCCCCCCCccceEecCCccccCc
Confidence 3445666555 357778887 567888875 3556665443 34433221 35888999999999763
Q ss_pred CEEEEEcCCCcEEEEeCCCCCCCc-ccccccc-CCCceeeeEEEEeeC---CCEEEEeeCCCcEEEEECCCCc---eeEE
Q 008820 306 PLCISGDSGGGIFVWSFSFPLGHE-PLKKWNE-EKDWRYSGIHALTTS---GRYLYTGSGDRTIKAWSLLDGT---LSCT 377 (552)
Q Consensus 306 ~~l~s~~~dg~i~vwd~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~---~~~l~sgs~dg~i~iwd~~~~~---~~~~ 377 (552)
.+|+++ +..+|+|.+....... ....+.. .......++++|.++ .++|.+.|-|.+..+||++++. ....
T Consensus 114 dlLATs--~D~LRlWri~~ee~~~~~~~~L~~~kns~~~aPlTSFDWne~dp~~igtSSiDTTCTiWdie~~~~~~vkTQ 191 (364)
T KOG0290|consen 114 DLLATS--SDFLRLWRIGDEESRVELQSVLNNNKNSEFCAPLTSFDWNEVDPNLIGTSSIDTTCTIWDIETGVSGTVKTQ 191 (364)
T ss_pred chhhcc--cCeEEEEeccCcCCceehhhhhccCcccccCCcccccccccCCcceeEeecccCeEEEEEEeeccccceeeE
Confidence 355554 4789999988532222 1112221 122244466777774 6799999999999999999873 3557
Q ss_pred ecCCCCCeEEEEEe-CC--EEEEEeCCCcEEEEECCCCceeEEEecC-CCCceEEEEEEcC-CCCEEEEEE-CCCcEEEE
Q 008820 378 MSGHKSAVSTLAVC-NG--VLYSGSRDGTIRLWSLSDHSLLTVLEED-SSGAVSSVLSLTA-VQHTLVVSH-ESGSIKVW 451 (552)
Q Consensus 378 ~~~h~~~v~~l~~~-~~--~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~~~~~~~~~~~s~-~~~~l~~g~-~dg~i~iw 451 (552)
+-+|..+|..++|. ++ .+++.+.||.+|+||+|..+....+... ........+++++ |-+++++-. ....|.|.
T Consensus 192 LIAHDKEV~DIaf~~~s~~~FASvgaDGSvRmFDLR~leHSTIIYE~p~~~~pLlRLswnkqDpnymATf~~dS~~V~iL 271 (364)
T KOG0290|consen 192 LIAHDKEVYDIAFLKGSRDVFASVGADGSVRMFDLRSLEHSTIIYEDPSPSTPLLRLSWNKQDPNYMATFAMDSNKVVIL 271 (364)
T ss_pred EEecCcceeEEEeccCccceEEEecCCCcEEEEEecccccceEEecCCCCCCcceeeccCcCCchHHhhhhcCCceEEEE
Confidence 78899999999999 33 9999999999999999987654444322 2122222245554 346666644 44578999
Q ss_pred eCC---cceeeeecccceEEEEEe---cCCEEEEEeCCCeEEEEecCCCeeeeeeccCCCcccCcceEEEEEeC---CeE
Q 008820 452 RND---KFMKSMQTHKGSVFAVFL---EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQ---GKL 522 (552)
Q Consensus 452 d~~---~~~~~~~~h~~~v~~v~~---~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~~---~~l 522 (552)
|++ .++..+++|.+.|+.++| ....|++++.|..+-+||+..-.......+.-.....+.|+.+.|++ +.+
T Consensus 272 DiR~P~tpva~L~~H~a~VNgIaWaPhS~~hictaGDD~qaliWDl~q~~~~~~~dPilay~a~~EVNqi~Ws~~~~Dwi 351 (364)
T KOG0290|consen 272 DIRVPCTPVARLRNHQASVNGIAWAPHSSSHICTAGDDCQALIWDLQQMPRENGEDPILAYTAGGEVNQIQWSSSQPDWI 351 (364)
T ss_pred EecCCCcceehhhcCcccccceEecCCCCceeeecCCcceEEEEecccccccCCCCchhhhhccceeeeeeecccCCCEE
Confidence 976 468889999999999998 78899999999999999997542211111111223467799999994 556
Q ss_pred EEEeC
Q 008820 523 FVGCA 527 (552)
Q Consensus 523 ~s~s~ 527 (552)
+.+..
T Consensus 352 ai~~~ 356 (364)
T KOG0290|consen 352 AICFG 356 (364)
T ss_pred EEEec
Confidence 66554
No 157
>KOG1063 consensus RNA polymerase II elongator complex, subunit ELP2, WD repeat superfamily [Chromatin structure and dynamics; Transcription]
Probab=99.80 E-value=3.7e-17 Score=159.46 Aligned_cols=301 Identities=16% Similarity=0.182 Sum_probs=204.2
Q ss_pred cCcceEEEeeCCCeEEEEEeecCccceEEEEEc--C---CEEEEEeCCCcEEEEeCCCC--eEEEEEeCCCCCeEEEEEe
Q 008820 229 GGVKDLVNGLSKGNVKFKDLQGHRDCVTGLAVG--G---GFLFSSSFDKSIHVWSLKDF--SHVHTFKGHDHKVMAVVYV 301 (552)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~l~~H~~~V~~l~~s--~---~~l~s~s~dg~I~iwd~~~~--~~~~~~~~h~~~v~~v~~~ 301 (552)
+.+..++...+...+.+..+.||.++|+|+.+- . .++++|+.|+.|++|.++.. .++.++.+|...+.++.-.
T Consensus 31 Ga~~~Iav~dp~k~~i~t~l~GH~a~VnC~~~l~~s~~~a~~vsG~sD~~v~lW~l~~~~~~~i~~~~g~~~~~~cv~a~ 110 (764)
T KOG1063|consen 31 GAGPAIAVADPEKILIVTTLDGHVARVNCVHWLPTSEIVAEMVSGDSDGRVILWKLRDEYLIKIYTIQGHCKECVCVVAR 110 (764)
T ss_pred cCCceEEEeCcccceeEEeccCCccceEEEEEcccccccceEEEccCCCcEEEEEEeehheEEEEeecCcceeEEEEEee
Confidence 445556666666677888899999999999997 3 37999999999999999733 4566777777766666432
Q ss_pred cCCCCEEEEEcCCCcEEEEeCCCCCCCccccccccCCCceeeeEEEEeeCCC--EEEEeeCCCcEEEEECCCC--ceeEE
Q 008820 302 DEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGR--YLYTGSGDRTIKAWSLLDG--TLSCT 377 (552)
Q Consensus 302 ~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~l~sgs~dg~i~iwd~~~~--~~~~~ 377 (552)
+ ....+.+.|+++.+||.+..+ ................-+.++.++.+ .++.|+.+..|.++.-.+. +.+..
T Consensus 111 ~---~~~~~~~ad~~v~vw~~~~~e-~~~~~~~rf~~k~~ipLcL~~~~~~~~~lla~Ggs~~~v~~~s~~~d~f~~v~e 186 (764)
T KOG1063|consen 111 S---SVMTCKAADGTVSVWDKQQDE-VFLLAVLRFEIKEAIPLCLAALKNNKTFLLACGGSKFVVDLYSSSADSFARVAE 186 (764)
T ss_pred e---eEEEeeccCceEEEeecCCCc-eeeehheehhhhhHhhHHHhhhccCCcEEEEecCcceEEEEeccCCcceeEEEE
Confidence 2 222333789999999984332 11111211111112222234444433 5677777888888876533 45678
Q ss_pred ecCCCCCeEEEEEe---C-C-EEEEEeCCCcEEEEECCCCc---------------------eeEEE---------ecCC
Q 008820 378 MSGHKSAVSTLAVC---N-G-VLYSGSRDGTIRLWSLSDHS---------------------LLTVL---------EEDS 422 (552)
Q Consensus 378 ~~~h~~~v~~l~~~---~-~-~l~s~~~dg~i~iwd~~~~~---------------------~~~~~---------~~~~ 422 (552)
+.||.+.|.+++|. . . +|+++|.|..||+|.+.-+. ....+ ...|
T Consensus 187 l~GH~DWIrsl~f~~~~~~~~~laS~SQD~yIRiW~i~~~~~~~~~~~e~~~t~~~~~~~f~~l~~i~~~is~eall~GH 266 (764)
T KOG1063|consen 187 LEGHTDWIRSLAFARLGGDDLLLASSSQDRYIRIWRIVLGDDEDSNEREDSLTTLSNLPVFMILEEIQYRISFEALLMGH 266 (764)
T ss_pred eeccchhhhhhhhhccCCCcEEEEecCCceEEEEEEEEecCCccccccccccccccCCceeeeeeeEEEEEehhhhhcCc
Confidence 89999999999998 2 3 89999999999999875322 01011 1234
Q ss_pred CCceEEEEEEcCCCCEEEEEECCCcEEEEeCCcc--ee-------eeecccceEEEEEe--cCCEEEEEeCCCeEEEEec
Q 008820 423 SGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDKF--MK-------SMQTHKGSVFAVFL--EGKWLFTGGWDKTVSVQEL 491 (552)
Q Consensus 423 ~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~~~--~~-------~~~~h~~~v~~v~~--~~~~l~sgs~dg~i~iwd~ 491 (552)
...+.+ +.|+|.+..|++++.|.++.+|...+. +. ...+....-....| +++.+++-+..|..++|..
T Consensus 267 eDWV~s-v~W~p~~~~LLSASaDksmiiW~pd~~tGiWv~~vRlGe~gg~a~GF~g~lw~~n~~~ii~~g~~Gg~hlWkt 345 (764)
T KOG1063|consen 267 EDWVYS-VWWHPEGLDLLSASADKSMIIWKPDENTGIWVDVVRLGEVGGSAGGFWGGLWSPNSNVIIAHGRTGGFHLWKT 345 (764)
T ss_pred ccceEE-EEEccchhhheecccCcceEEEecCCccceEEEEEEeecccccccceeeEEEcCCCCEEEEecccCcEEEEec
Confidence 556666 689999999999999999999975432 11 11222333445444 7888999999999999994
Q ss_pred CCC-eeeeeeccCCCcccCcceEEEEEeC--CeEEEEeCCCeEEEEEec
Q 008820 492 AGD-EFEEDVIPTGAIPCGSVITALLYWQ--GKLFVGCADRTVKIALCN 537 (552)
Q Consensus 492 ~~~-~~~~~~~~~~~~~~~~~v~~l~~~~--~~l~s~s~Dg~v~iw~~~ 537 (552)
.+. .........+ |...|.+++|+| ..|+++|.|.+-|+|---
T Consensus 346 ~d~~~w~~~~~iSG---H~~~V~dv~W~psGeflLsvs~DQTTRlFa~w 391 (764)
T KOG1063|consen 346 KDKTFWTQEPVISG---HVDGVKDVDWDPSGEFLLSVSLDQTTRLFARW 391 (764)
T ss_pred cCccceeecccccc---ccccceeeeecCCCCEEEEeccccceeeeccc
Confidence 332 2222222222 366799999994 569999999999998654
No 158
>KOG0322 consensus G-protein beta subunit-like protein GNB1L, contains WD repeats [General function prediction only]
Probab=99.79 E-value=1.4e-18 Score=150.41 Aligned_cols=243 Identities=17% Similarity=0.243 Sum_probs=181.1
Q ss_pred EEEeecCccceEEEEEc-CCEEEEEeCCCcEEEEeCCCCeEEEEEe-CCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeC
Q 008820 245 FKDLQGHRDCVTGLAVG-GGFLFSSSFDKSIHVWSLKDFSHVHTFK-GHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSF 322 (552)
Q Consensus 245 ~~~l~~H~~~V~~l~~s-~~~l~s~s~dg~I~iwd~~~~~~~~~~~-~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~ 322 (552)
.+.|++|.+.|+++.|. +.+|.+|..-|.|++|++.+.+....+. .|...|+.+.-.|++ -+.+-+.|+.+.+|++
T Consensus 7 ~fvLRp~~~~v~s~~fqa~~rL~sg~~~G~V~~w~lqt~r~~~~~r~~g~~~it~lq~~p~d--~l~tqgRd~~L~lw~i 84 (323)
T KOG0322|consen 7 FFVLRPHSSSVTSVLFQANERLMSGLSVGIVKMWVLQTERDLPLIRLFGRLFITNLQSIPND--SLDTQGRDPLLILWTI 84 (323)
T ss_pred eeEeccccchheehhhccchhhhcccccceEEEEEeecCccchhhhhhccceeeceeecCCc--chhhcCCCceEEEEEc
Confidence 56677999999999999 8889999999999999999999888888 577889999888864 4678899999999998
Q ss_pred CCCCC----------------------Ccc--ccccccC----------------------CCceeeeEEEEeeC---CC
Q 008820 323 SFPLG----------------------HEP--LKKWNEE----------------------KDWRYSGIHALTTS---GR 353 (552)
Q Consensus 323 ~~~~~----------------------~~~--~~~~~~~----------------------~~~~~~~~~~~~~~---~~ 353 (552)
..... ... +...... .......+.++..+ +.
T Consensus 85 a~s~~i~i~Si~~nslgFCrfSl~~~~k~~eqll~yp~rgsde~h~~D~g~~tqv~i~dd~~~~Klgsvmc~~~~~~c~s 164 (323)
T KOG0322|consen 85 AYSAFISIHSIVVNSLGFCRFSLVKKPKNSEQLLEYPSRGSDETHKQDGGDTTQVQIADDSERSKLGSVMCQDKDHACGS 164 (323)
T ss_pred cCcceEEEeeeeccccccccceeccCCCcchhheecCCcccchhhhhccCccceeEccCchhccccCceeeeeccccccc
Confidence 75110 000 0000000 00001122344422 22
Q ss_pred --EEEEeeCCCcEEEEECCCCc----------eeEEecCCCCCeEEEEEe--CCEEEEEeCCCcEEEEECCCC--ce--e
Q 008820 354 --YLYTGSGDRTIKAWSLLDGT----------LSCTMSGHKSAVSTLAVC--NGVLYSGSRDGTIRLWSLSDH--SL--L 415 (552)
Q Consensus 354 --~l~sgs~dg~i~iwd~~~~~----------~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~--~~--~ 415 (552)
.+++|.++|.+.+||+.++. .......|..+|.++.+. -+.=++|+.+..+..|++... .+ -
T Consensus 165 ~~lllaGyEsghvv~wd~S~~~~~~~~~~~~kv~~~~ash~qpvlsldyas~~~rGisgga~dkl~~~Sl~~s~gslq~~ 244 (323)
T KOG0322|consen 165 TFLLLAGYESGHVVIWDLSTGDKIIQLPQSSKVESPNASHKQPVLSLDYASSCDRGISGGADDKLVMYSLNHSTGSLQIR 244 (323)
T ss_pred eEEEEEeccCCeEEEEEccCCceeeccccccccccchhhccCcceeeeechhhcCCcCCCccccceeeeeccccCccccc
Confidence 67889999999999999873 333445789999999997 336678888889999988643 22 1
Q ss_pred EEEecCCCCceEEEEEEcCCCCEEEEEECCCcEEEEeCC--cceeeeecccceEEEEEe--cCCEEEEEeCCCeEEEEec
Q 008820 416 TVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRND--KFMKSMQTHKGSVFAVFL--EGKWLFTGGWDKTVSVQEL 491 (552)
Q Consensus 416 ~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~--~~~~~~~~h~~~v~~v~~--~~~~l~sgs~dg~i~iwd~ 491 (552)
......+++. .. +.+-||++.+++++.|+.||+|.-+ +++..++.|.+.|++++| +...++++|.|++|.+|++
T Consensus 245 ~e~~lknpGv-~g-vrIRpD~KIlATAGWD~RiRVyswrtl~pLAVLkyHsagvn~vAfspd~~lmAaaskD~rISLWkL 322 (323)
T KOG0322|consen 245 KEITLKNPGV-SG-VRIRPDGKILATAGWDHRIRVYSWRTLNPLAVLKYHSAGVNAVAFSPDCELMAAASKDARISLWKL 322 (323)
T ss_pred ceEEecCCCc-cc-eEEccCCcEEeecccCCcEEEEEeccCCchhhhhhhhcceeEEEeCCCCchhhhccCCceEEeeec
Confidence 2222233333 23 5889999999999999999998854 688999999999999998 6689999999999999986
No 159
>KOG1517 consensus Guanine nucleotide binding protein MIP1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.79 E-value=2.5e-17 Score=167.49 Aligned_cols=287 Identities=18% Similarity=0.297 Sum_probs=199.6
Q ss_pred CccceEEEEEc--CCEEEEEeCCCcEEEEeCCCCeEEEEEeCC---CCCeEEEEEec-CCCCEEEEEcCCCcEEEEeCCC
Q 008820 251 HRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKGH---DHKVMAVVYVD-EDQPLCISGDSGGGIFVWSFSF 324 (552)
Q Consensus 251 H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~~~~~~~~~h---~~~v~~v~~~~-~~~~~l~s~~~dg~i~vwd~~~ 324 (552)
...+-..+.|+ ...++++...-.|+|||.+.++.+..|..+ ...|+.+.+.. ++..++++|+.||.|+||+--.
T Consensus 1063 n~~~pk~~~~hpf~p~i~~ad~r~~i~vwd~e~~~~l~~F~n~~~~~t~Vs~l~liNe~D~aLlLtas~dGvIRIwk~y~ 1142 (1387)
T KOG1517|consen 1063 NNQPPKTLKFHPFEPQIAAADDRERIRVWDWEKGRLLNGFDNGAFPDTRVSDLELINEQDDALLLTASSDGVIRIWKDYA 1142 (1387)
T ss_pred CCCCCceeeecCCCceeEEcCCcceEEEEecccCceeccccCCCCCCCccceeeeecccchhheeeeccCceEEEecccc
Confidence 33445667777 788888887779999999999998877654 35788888865 4556889999999999997433
Q ss_pred C--CCCccccccccCCCc-----eeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCceeEEec-CCCCCeEEEEEe---CC
Q 008820 325 P--LGHEPLKKWNEEKDW-----RYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMS-GHKSAVSTLAVC---NG 393 (552)
Q Consensus 325 ~--~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~-~h~~~v~~l~~~---~~ 393 (552)
. +..+.+..+..-.+. ....+..+.....+|++++.-..|+|||....+.+..+. +...-|+++.-+ ++
T Consensus 1143 ~~~~~~eLVTaw~~Ls~~~~~~r~~~~v~dWqQ~~G~Ll~tGd~r~IRIWDa~~E~~~~diP~~s~t~vTaLS~~~~~gn 1222 (1387)
T KOG1517|consen 1143 DKWKKPELVTAWSSLSDQLPGARGTGLVVDWQQQSGHLLVTGDVRSIRIWDAHKEQVVADIPYGSSTLVTALSADLVHGN 1222 (1387)
T ss_pred cccCCceeEEeeccccccCccCCCCCeeeehhhhCCeEEecCCeeEEEEEecccceeEeecccCCCccceeecccccCCc
Confidence 2 233333333322110 111334444445567776667899999998887777664 344567777766 56
Q ss_pred EEEEEeCCCcEEEEECCCCc---eeEEEecCCCCc-eEEEEEEcCCCC-EEEEEECCCcEEEEeCCc-cee---eeeccc
Q 008820 394 VLYSGSRDGTIRLWSLSDHS---LLTVLEEDSSGA-VSSVLSLTAVQH-TLVVSHESGSIKVWRNDK-FMK---SMQTHK 464 (552)
Q Consensus 394 ~l~s~~~dg~i~iwd~~~~~---~~~~~~~~~~~~-~~~~~~~s~~~~-~l~~g~~dg~i~iwd~~~-~~~---~~~~h~ 464 (552)
.+++|..||.|++||.|... .+...+.|.... +.. +.+.+.|- .|++|+.||.|++||++. ... ....|.
T Consensus 1223 ~i~AGfaDGsvRvyD~R~a~~ds~v~~~R~h~~~~~Iv~-~slq~~G~~elvSgs~~G~I~~~DlR~~~~e~~~~iv~~~ 1301 (1387)
T KOG1517|consen 1223 IIAAGFADGSVRVYDRRMAPPDSLVCVYREHNDVEPIVH-LSLQRQGLGELVSGSQDGDIQLLDLRMSSKETFLTIVAHW 1301 (1387)
T ss_pred eEEEeecCCceEEeecccCCccccceeecccCCccccee-EEeecCCCcceeeeccCCeEEEEecccCcccccceeeecc
Confidence 99999999999999998654 345555553321 333 56766554 599999999999999875 222 222232
Q ss_pred --c-eEEEEEe--cCCEEEEEeCCCeEEEEecCCCeeeeeeccCCCc-ccCcceEEEEEeCCe--EEEEeCCCeEEEEEe
Q 008820 465 --G-SVFAVFL--EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAI-PCGSVITALLYWQGK--LFVGCADRTVKIALC 536 (552)
Q Consensus 465 --~-~v~~v~~--~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~-~~~~~v~~l~~~~~~--l~s~s~Dg~v~iw~~ 536 (552)
+ ..+++.. +...+|+|+. +.|+||++.+..+........+. +....+.+++|+|-+ +++|+.|.+|.||..
T Consensus 1302 ~yGs~lTal~VH~hapiiAsGs~-q~ikIy~~~G~~l~~~k~n~~F~~q~~gs~scL~FHP~~~llAaG~~Ds~V~iYs~ 1380 (1387)
T KOG1517|consen 1302 EYGSALTALTVHEHAPIIASGSA-QLIKIYSLSGEQLNIIKYNPGFMGQRIGSVSCLAFHPHRLLLAAGSADSTVSIYSC 1380 (1387)
T ss_pred ccCccceeeeeccCCCeeeecCc-ceEEEEecChhhhcccccCcccccCcCCCcceeeecchhHhhhhccCCceEEEeec
Confidence 3 3666654 7889999998 99999999877655443333332 224557999999876 888999999999998
Q ss_pred cCC
Q 008820 537 NRQ 539 (552)
Q Consensus 537 ~~~ 539 (552)
.+.
T Consensus 1381 ~k~ 1383 (1387)
T KOG1517|consen 1381 EKP 1383 (1387)
T ss_pred CCc
Confidence 743
No 160
>KOG0307 consensus Vesicle coat complex COPII, subunit SEC31 [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.79 E-value=8.6e-19 Score=180.33 Aligned_cols=235 Identities=23% Similarity=0.308 Sum_probs=182.8
Q ss_pred ceEEEEEc--C----CEEEEEeCCCcEEEEeCCCC------eEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEe
Q 008820 254 CVTGLAVG--G----GFLFSSSFDKSIHVWSLKDF------SHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWS 321 (552)
Q Consensus 254 ~V~~l~~s--~----~~l~s~s~dg~I~iwd~~~~------~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd 321 (552)
.-+.++|. + ..|+.|..||.|.+||...- ..+.+...|++.|..+.|++..++++++|+.||.|.|||
T Consensus 66 rF~kL~W~~~g~~~~GlIaGG~edG~I~ly~p~~~~~~~~~~~la~~~~h~G~V~gLDfN~~q~nlLASGa~~geI~iWD 145 (1049)
T KOG0307|consen 66 RFNKLAWGSYGSHSHGLIAGGLEDGNIVLYDPASIIANASEEVLATKSKHTGPVLGLDFNPFQGNLLASGADDGEILIWD 145 (1049)
T ss_pred cceeeeecccCCCccceeeccccCCceEEecchhhccCcchHHHhhhcccCCceeeeeccccCCceeeccCCCCcEEEec
Confidence 45667776 3 35999999999999998652 235667789999999999999999999999999999999
Q ss_pred CCCCCCCccccccccCCCceeeeEEEEeeCCC---EEEEeeCCCcEEEEECCCCceeEEecCCCC--CeEEEEEeC-C--
Q 008820 322 FSFPLGHEPLKKWNEEKDWRYSGIHALTTSGR---YLYTGSGDRTIKAWSLLDGTLSCTMSGHKS--AVSTLAVCN-G-- 393 (552)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~--~v~~l~~~~-~-- 393 (552)
+...+...... .......+.+++++.+ .|++++.+|.+.|||++..+++..+..+.+ .+..++|++ +
T Consensus 146 lnn~~tP~~~~-----~~~~~~eI~~lsWNrkvqhILAS~s~sg~~~iWDlr~~~pii~ls~~~~~~~~S~l~WhP~~aT 220 (1049)
T KOG0307|consen 146 LNKPETPFTPG-----SQAPPSEIKCLSWNRKVSHILASGSPSGRAVIWDLRKKKPIIKLSDTPGRMHCSVLAWHPDHAT 220 (1049)
T ss_pred cCCcCCCCCCC-----CCCCcccceEeccchhhhHHhhccCCCCCceeccccCCCcccccccCCCccceeeeeeCCCCce
Confidence 98654333222 1113334677888755 899999999999999999888887765554 477899993 3
Q ss_pred EEEEEeCCC---cEEEEECCCCc-eeEEEecCCCCceEEEEEEcCCC-CEEEEEECCCcEEEEeCCc--ceeeeecccce
Q 008820 394 VLYSGSRDG---TIRLWSLSDHS-LLTVLEEDSSGAVSSVLSLTAVQ-HTLVVSHESGSIKVWRNDK--FMKSMQTHKGS 466 (552)
Q Consensus 394 ~l~s~~~dg---~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~s~~~-~~l~~g~~dg~i~iwd~~~--~~~~~~~h~~~ 466 (552)
.+++++.|. .|.+||+|... +++.+..|..+.. + +.|++.+ +++++++.|+.|.+|+.++ .+..+....++
T Consensus 221 ql~~As~dd~~PviqlWDlR~assP~k~~~~H~~Gil-s-lsWc~~D~~lllSsgkD~~ii~wN~~tgEvl~~~p~~~nW 298 (1049)
T KOG0307|consen 221 QLLVASGDDSAPVIQLWDLRFASSPLKILEGHQRGIL-S-LSWCPQDPRLLLSSGKDNRIICWNPNTGEVLGELPAQGNW 298 (1049)
T ss_pred eeeeecCCCCCceeEeecccccCCchhhhccccccee-e-eccCCCCchhhhcccCCCCeeEecCCCceEeeecCCCCcc
Confidence 677777654 59999998754 5677767655544 3 5676655 8999999999999999654 66777777789
Q ss_pred EEEEEe---cCCEEEEEeCCCeEEEEecCCCe
Q 008820 467 VFAVFL---EGKWLFTGGWDKTVSVQELAGDE 495 (552)
Q Consensus 467 v~~v~~---~~~~l~sgs~dg~i~iwd~~~~~ 495 (552)
+..+.| +...+++++.||.|.|+.+.+..
T Consensus 299 ~fdv~w~pr~P~~~A~asfdgkI~I~sl~~~~ 330 (1049)
T KOG0307|consen 299 CFDVQWCPRNPSVMAAASFDGKISIYSLQGTD 330 (1049)
T ss_pred eeeeeecCCCcchhhhheeccceeeeeeecCC
Confidence 999988 66689999999999999997543
No 161
>KOG2919 consensus Guanine nucleotide-binding protein [General function prediction only]
Probab=99.78 E-value=8.2e-17 Score=143.51 Aligned_cols=260 Identities=17% Similarity=0.246 Sum_probs=189.8
Q ss_pred ceEEEEEc--CCEEEEEeCCCcEEEEeCCCC------------eEEEEEe-CCCCCeEEEEEec------CCCCEEEEEc
Q 008820 254 CVTGLAVG--GGFLFSSSFDKSIHVWSLKDF------------SHVHTFK-GHDHKVMAVVYVD------EDQPLCISGD 312 (552)
Q Consensus 254 ~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~------------~~~~~~~-~h~~~v~~v~~~~------~~~~~l~s~~ 312 (552)
-...+.|+ |..|++-+.|..+++|++... +...+++ .....|...+|.+ ....++++.+
T Consensus 51 f~kgckWSPDGSciL~~sedn~l~~~nlP~dlys~~~~~~~~~~~~~~~r~~eg~tvydy~wYs~M~s~qP~t~l~a~ss 130 (406)
T KOG2919|consen 51 FLKGCKWSPDGSCILSLSEDNCLNCWNLPFDLYSKKADGPLNFSKHLSYRYQEGETVYDYCWYSRMKSDQPSTNLFAVSS 130 (406)
T ss_pred hhccceeCCCCceEEeecccCeeeEEecChhhcccCCCCccccccceeEEeccCCEEEEEEeeeccccCCCccceeeecc
Confidence 34567888 999999999999999987421 0111111 1345677778863 3556889999
Q ss_pred CCCcEEEEeCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEEC-CCCcee--EEe-----cCCCCC
Q 008820 313 SGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSL-LDGTLS--CTM-----SGHKSA 384 (552)
Q Consensus 313 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~-~~~~~~--~~~-----~~h~~~ 384 (552)
.+.-|++||.-+++.....+.+.........-..+|++||.+|++|.. ..|+++|+ +.|..- ... .+..+-
T Consensus 131 r~~PIh~wdaftG~lraSy~~ydh~de~taAhsL~Fs~DGeqlfaGyk-rcirvFdt~RpGr~c~vy~t~~~~k~gq~gi 209 (406)
T KOG2919|consen 131 RDQPIHLWDAFTGKLRASYRAYDHQDEYTAAHSLQFSPDGEQLFAGYK-RCIRVFDTSRPGRDCPVYTTVTKGKFGQKGI 209 (406)
T ss_pred ccCceeeeeccccccccchhhhhhHHhhhhheeEEecCCCCeEeeccc-ceEEEeeccCCCCCCcchhhhhcccccccce
Confidence 999999999998877666665554433333445689999999998755 78999999 555322 111 234677
Q ss_pred eEEEEEe---CCEEEEEeCCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEEC-CCcEEEEeCCc---ce
Q 008820 385 VSTLAVC---NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHE-SGSIKVWRNDK---FM 457 (552)
Q Consensus 385 v~~l~~~---~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~-dg~i~iwd~~~---~~ 457 (552)
+.|++|+ .+.++.|+...++-|+.-..+.++..+.++ .+.++. +.|.++|+.|++|.. |-.|..||++. ++
T Consensus 210 isc~a~sP~~~~~~a~gsY~q~~giy~~~~~~pl~llggh-~gGvTh-L~~~edGn~lfsGaRk~dkIl~WDiR~~~~pv 287 (406)
T KOG2919|consen 210 ISCFAFSPMDSKTLAVGSYGQRVGIYNDDGRRPLQLLGGH-GGGVTH-LQWCEDGNKLFSGARKDDKILCWDIRYSRDPV 287 (406)
T ss_pred eeeeeccCCCCcceeeecccceeeeEecCCCCceeeeccc-CCCeee-EEeccCcCeecccccCCCeEEEEeehhccchh
Confidence 8899999 348999999999999998888888888766 455555 799999999999875 67899999774 55
Q ss_pred eeeecccc----eE-EEEEecCCEEEEEeCCCeEEEEecCC-CeeeeeeccCCCcccCcceEEEEEeCCe
Q 008820 458 KSMQTHKG----SV-FAVFLEGKWLFTGGWDKTVSVQELAG-DEFEEDVIPTGAIPCGSVITALLYWQGK 521 (552)
Q Consensus 458 ~~~~~h~~----~v-~~v~~~~~~l~sgs~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~v~~l~~~~~~ 521 (552)
..+..|.. .| ..+.+++++|++|+.||.|++||+.+ +.....+ ......++.++++|-.
T Consensus 288 ~~L~rhv~~TNQRI~FDld~~~~~LasG~tdG~V~vwdlk~~gn~~sv~-----~~~sd~vNgvslnP~m 352 (406)
T KOG2919|consen 288 YALERHVGDTNQRILFDLDPKGEILASGDTDGSVRVWDLKDLGNEVSVT-----GNYSDTVNGVSLNPIM 352 (406)
T ss_pred hhhhhhccCccceEEEecCCCCceeeccCCCccEEEEecCCCCCccccc-----ccccccccceecCccc
Confidence 56666655 22 34556899999999999999999987 3322221 1236678899999866
No 162
>KOG4328 consensus WD40 protein [Function unknown]
Probab=99.77 E-value=3.1e-17 Score=152.65 Aligned_cols=257 Identities=18% Similarity=0.243 Sum_probs=176.9
Q ss_pred EeCCCCeEEEEEeCCCCCeEEEEEecCCC-CEEEEEcCCCcEEEEeCCCCCCC-ccccccccCCCceeeeEEEEee-CCC
Q 008820 277 WSLKDFSHVHTFKGHDHKVMAVVYVDEDQ-PLCISGDSGGGIFVWSFSFPLGH-EPLKKWNEEKDWRYSGIHALTT-SGR 353 (552)
Q Consensus 277 wd~~~~~~~~~~~~h~~~v~~v~~~~~~~-~~l~s~~~dg~i~vwd~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~ 353 (552)
.|+.+-......+.+.+.|++++|+|..+ .++++|+.-|.|-+||+.+.... ..+..+..+.. .+..+ .|+| +..
T Consensus 171 l~l~~~~~~~v~kv~~~Rit~l~fHPt~~~~lva~GdK~G~VG~Wn~~~~~~d~d~v~~f~~hs~-~Vs~l-~F~P~n~s 248 (498)
T KOG4328|consen 171 LDLDDYRILNVAKVTDRRITSLAFHPTENRKLVAVGDKGGQVGLWNFGTQEKDKDGVYLFTPHSG-PVSGL-KFSPANTS 248 (498)
T ss_pred cccccceecceeEecccceEEEEecccCcceEEEEccCCCcEEEEecCCCCCccCceEEeccCCc-cccce-EecCCChh
Confidence 45555566677778999999999999887 78999999999999999633222 22333333221 23333 4555 445
Q ss_pred EEEEeeCCCcEEEEECCCCce--eEEecCCCCCeEEEEEe--CCEEEEEeCCCcEEEEECCCCce-eEEEecCCCCceEE
Q 008820 354 YLYTGSGDRTIKAWSLLDGTL--SCTMSGHKSAVSTLAVC--NGVLYSGSRDGTIRLWSLSDHSL-LTVLEEDSSGAVSS 428 (552)
Q Consensus 354 ~l~sgs~dg~i~iwd~~~~~~--~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~-~~~~~~~~~~~~~~ 428 (552)
.+++.|.||+|++-|++++.. +.........+.++.|+ +..++.+..=|...+||++++.. ...+..|.. .+.+
T Consensus 249 ~i~ssSyDGtiR~~D~~~~i~e~v~s~~~d~~~fs~~d~~~e~~~vl~~~~~G~f~~iD~R~~~s~~~~~~lh~k-KI~s 327 (498)
T KOG4328|consen 249 QIYSSSYDGTIRLQDFEGNISEEVLSLDTDNIWFSSLDFSAESRSVLFGDNVGNFNVIDLRTDGSEYENLRLHKK-KITS 327 (498)
T ss_pred heeeeccCceeeeeeecchhhHHHhhcCccceeeeeccccCCCccEEEeecccceEEEEeecCCccchhhhhhhc-ccce
Confidence 999999999999999987643 33333345566777777 44777777777999999998765 444555533 4555
Q ss_pred EEEEcCC-CCEEEEEECCCcEEEEeCCcc------eeeeecccceEEEEEe--cCCEEEEEeCCCeEEEEecC----CCe
Q 008820 429 VLSLTAV-QHTLVVSHESGSIKVWRNDKF------MKSMQTHKGSVFAVFL--EGKWLFTGGWDKTVSVQELA----GDE 495 (552)
Q Consensus 429 ~~~~s~~-~~~l~~g~~dg~i~iwd~~~~------~~~~~~h~~~v~~v~~--~~~~l~sgs~dg~i~iwd~~----~~~ 495 (552)
++++|. ..++++++.|++.+|||+++. .-....|...|.+..| ++..|+|.+.|..|+|||.. ...
T Consensus 328 -v~~NP~~p~~laT~s~D~T~kIWD~R~l~~K~sp~lst~~HrrsV~sAyFSPs~gtl~TT~~D~~IRv~dss~~sa~~~ 406 (498)
T KOG4328|consen 328 -VALNPVCPWFLATASLDQTAKIWDLRQLRGKASPFLSTLPHRRSVNSAYFSPSGGTLLTTCQDNEIRVFDSSCISAKDE 406 (498)
T ss_pred -eecCCCCchheeecccCcceeeeehhhhcCCCCcceecccccceeeeeEEcCCCCceEeeccCCceEEeecccccccCC
Confidence 577775 457899999999999997743 2334568999988876 55569999999999999984 222
Q ss_pred eeeeeccCCCcccCcceEEEEEeCC--eEEEEeCCCeEEEEEec
Q 008820 496 FEEDVIPTGAIPCGSVITALLYWQG--KLFVGCADRTVKIALCN 537 (552)
Q Consensus 496 ~~~~~~~~~~~~~~~~v~~l~~~~~--~l~s~s~Dg~v~iw~~~ 537 (552)
....+.+.......-......|.|+ .+++|-.-..|-|+|-+
T Consensus 407 p~~~I~Hn~~t~RwlT~fKA~W~P~~~li~vg~~~r~IDv~~~~ 450 (498)
T KOG4328|consen 407 PLGTIPHNNRTGRWLTPFKAAWDPDYNLIVVGRYPRPIDVFDGN 450 (498)
T ss_pred ccceeeccCcccccccchhheeCCCccEEEEeccCcceeEEcCC
Confidence 2223333222111112344567764 48888888899999976
No 163
>KOG1334 consensus WD40 repeat protein [General function prediction only]
Probab=99.76 E-value=7.2e-18 Score=158.00 Aligned_cols=283 Identities=17% Similarity=0.177 Sum_probs=210.4
Q ss_pred EEeecCccceEEEEEc--CCEEEEEeCCCcEEEEeCCCCeEEEEE-eCCCCCeEEEEEecC-CCCEEEEEcCCCcEEEEe
Q 008820 246 KDLQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTF-KGHDHKVMAVVYVDE-DQPLCISGDSGGGIFVWS 321 (552)
Q Consensus 246 ~~l~~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~~~~~~~-~~h~~~v~~v~~~~~-~~~~l~s~~~dg~i~vwd 321 (552)
..|.+|.+.|+.+.|+ |..++|||.|..|.+||+.+++....+ .+|...|..-.|.|. +..-+++++.||.+++=.
T Consensus 136 ~kL~~H~GcVntV~FN~~Gd~l~SgSDD~~vv~WdW~~~~~~l~f~SGH~~NvfQaKFiP~s~d~ti~~~s~dgqvr~s~ 215 (559)
T KOG1334|consen 136 KKLNKHKGCVNTVHFNQRGDVLASGSDDLQVVVWDWVSGSPKLSFESGHCNNVFQAKFIPFSGDRTIVTSSRDGQVRVSE 215 (559)
T ss_pred hcccCCCCccceeeecccCceeeccCccceEEeehhhccCcccccccccccchhhhhccCCCCCcCceeccccCceeeee
Confidence 4488999999999999 999999999999999999999887776 469888988889885 345679999999999988
Q ss_pred CCCCCCCccccccccCCCceeeeEEEEeeC-CCEEEEeeCCCcEEEEECCCCceeEEe---cCCCC---CeEEEEEe---
Q 008820 322 FSFPLGHEPLKKWNEEKDWRYSGIHALTTS-GRYLYTGSGDRTIKAWSLLDGTLSCTM---SGHKS---AVSTLAVC--- 391 (552)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~sgs~dg~i~iwd~~~~~~~~~~---~~h~~---~v~~l~~~--- 391 (552)
+.........+....+.. +.. ..++-|+ ...|.+++.|+.+.-+|++++.+...+ ..+.. ...+++..
T Consensus 216 i~~t~~~e~t~rl~~h~g-~vh-klav~p~sp~~f~S~geD~~v~~~Dlr~~~pa~~~~cr~~~~~~~v~L~~Ia~~P~n 293 (559)
T KOG1334|consen 216 ILETGYVENTKRLAPHEG-PVH-KLAVEPDSPKPFLSCGEDAVVFHIDLRQDVPAEKFVCREADEKERVGLYTIAVDPRN 293 (559)
T ss_pred eccccceecceecccccC-ccc-eeeecCCCCCcccccccccceeeeeeccCCccceeeeeccCCccceeeeeEecCCCC
Confidence 765544443333333332 111 2344443 458999999999999999887654433 23333 45667766
Q ss_pred CCEEEEEeCCCcEEEEECCCCce------eEEEecC-----CCCceEEEEEEcCCCCEEEEEECCCcEEEEeCC------
Q 008820 392 NGVLYSGSRDGTIRLWSLSDHSL------LTVLEED-----SSGAVSSVLSLTAVQHTLVVSHESGSIKVWRND------ 454 (552)
Q Consensus 392 ~~~l~s~~~dg~i~iwd~~~~~~------~~~~~~~-----~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~------ 454 (552)
.+.+++++.|..+++||.+.-.. +..+..+ ....++ ++.++.++.-+.++..|-.|+++...
T Consensus 294 t~~faVgG~dqf~RvYD~R~~~~e~~n~~~~~f~p~hl~~d~~v~IT-gl~Ysh~~sElLaSYnDe~IYLF~~~~~~G~~ 372 (559)
T KOG1334|consen 294 TNEFAVGGSDQFARVYDQRRIDKEENNGVLDKFCPHHLVEDDPVNIT-GLVYSHDGSELLASYNDEDIYLFNKSMGDGSE 372 (559)
T ss_pred ccccccCChhhhhhhhcccchhhccccchhhhcCCccccccCcccce-eEEecCCccceeeeecccceEEeccccccCCC
Confidence 34899999999999999875322 2222222 223344 47899888888888889999999521
Q ss_pred --------cce-eeeecccc--eEEEEEe---cCCEEEEEeCCCeEEEEecCCCeeeeeeccCCCcccCcceEEEEEeCC
Q 008820 455 --------KFM-KSMQTHKG--SVFAVFL---EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQG 520 (552)
Q Consensus 455 --------~~~-~~~~~h~~--~v~~v~~---~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~ 520 (552)
..+ +.+++|.+ .|-.+.| ...++++||.-|.|.||+-.++++...+... ...|+|+..+|-
T Consensus 373 p~~~s~~~~~~k~vYKGHrN~~TVKgVNFfGPrsEyVvSGSDCGhIFiW~K~t~eii~~MegD-----r~VVNCLEpHP~ 447 (559)
T KOG1334|consen 373 PDPSSPREQYVKRVYKGHRNSRTVKGVNFFGPRSEYVVSGSDCGHIFIWDKKTGEIIRFMEGD-----RHVVNCLEPHPH 447 (559)
T ss_pred CCCCcchhhccchhhcccccccccceeeeccCccceEEecCccceEEEEecchhHHHHHhhcc-----cceEeccCCCCC
Confidence 112 23788876 4556666 5789999999999999999998887766654 347999999985
Q ss_pred e--EEEEeCCCeEEEEEe
Q 008820 521 K--LFVGCADRTVKIALC 536 (552)
Q Consensus 521 ~--l~s~s~Dg~v~iw~~ 536 (552)
. |++.+-|.-|+||..
T Consensus 448 ~PvLAsSGid~DVKIWTP 465 (559)
T KOG1334|consen 448 LPVLASSGIDHDVKIWTP 465 (559)
T ss_pred CchhhccCCccceeeecC
Confidence 5 999999999999986
No 164
>KOG0303 consensus Actin-binding protein Coronin, contains WD40 repeats [Cytoskeleton]
Probab=99.76 E-value=4.3e-17 Score=148.93 Aligned_cols=200 Identities=18% Similarity=0.264 Sum_probs=152.4
Q ss_pred eecCccceEEEEEc---CCEEEEEeCCCcEEEEeCCCC-------eEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcE
Q 008820 248 LQGHRDCVTGLAVG---GGFLFSSSFDKSIHVWSLKDF-------SHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGI 317 (552)
Q Consensus 248 l~~H~~~V~~l~~s---~~~l~s~s~dg~I~iwd~~~~-------~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i 317 (552)
+.||+++|..++|+ ...+||||.|.+|.||++..+ +++..+.+|...|.-++|+|...++|++++.|.+|
T Consensus 77 v~GHt~~vLDi~w~PfnD~vIASgSeD~~v~vW~IPe~~l~~~ltepvv~L~gH~rrVg~V~wHPtA~NVLlsag~Dn~v 156 (472)
T KOG0303|consen 77 VCGHTAPVLDIDWCPFNDCVIASGSEDTKVMVWQIPENGLTRDLTEPVVELYGHQRRVGLVQWHPTAPNVLLSAGSDNTV 156 (472)
T ss_pred ccCccccccccccCccCCceeecCCCCceEEEEECCCcccccCcccceEEEeecceeEEEEeecccchhhHhhccCCceE
Confidence 67999999999998 889999999999999998653 45778899999999999999999999999999999
Q ss_pred EEEeCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCceeEEecCCCCC--eEEEEEeCCEE
Q 008820 318 FVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSA--VSTLAVCNGVL 395 (552)
Q Consensus 318 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~--v~~l~~~~~~l 395 (552)
.+||+.++.....+. |. ......+|+.+|.++++.+.|..|++||.++++.+..-.+|.+. ...+-..++.+
T Consensus 157 ~iWnv~tgeali~l~----hp--d~i~S~sfn~dGs~l~TtckDKkvRv~dpr~~~~v~e~~~heG~k~~Raifl~~g~i 230 (472)
T KOG0303|consen 157 SIWNVGTGEALITLD----HP--DMVYSMSFNRDGSLLCTTCKDKKVRVIDPRRGTVVSEGVAHEGAKPARAIFLASGKI 230 (472)
T ss_pred EEEeccCCceeeecC----CC--CeEEEEEeccCCceeeeecccceeEEEcCCCCcEeeecccccCCCcceeEEeccCce
Confidence 999999886554433 22 22223477889999999999999999999999999988888763 33333335556
Q ss_pred EEEe----CCCcEEEEECCCCce-eEEEecCCCCceEEEEEEcCCCCEEEEEE-CCCcEEEEeCC
Q 008820 396 YSGS----RDGTIRLWSLSDHSL-LTVLEEDSSGAVSSVLSLTAVQHTLVVSH-ESGSIKVWRND 454 (552)
Q Consensus 396 ~s~~----~dg~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~~s~~~~~l~~g~-~dg~i~iwd~~ 454 (552)
++.+ .+..+-+||..+.+. +..........+. .-.+.++.++++.++ .|+.|+.|...
T Consensus 231 ~tTGfsr~seRq~aLwdp~nl~eP~~~~elDtSnGvl-~PFyD~dt~ivYl~GKGD~~IRYyEit 294 (472)
T KOG0303|consen 231 FTTGFSRMSERQIALWDPNNLEEPIALQELDTSNGVL-LPFYDPDTSIVYLCGKGDSSIRYFEIT 294 (472)
T ss_pred eeeccccccccceeccCcccccCcceeEEeccCCceE-EeeecCCCCEEEEEecCCcceEEEEec
Confidence 5554 477899999876443 2222222222222 236788888776655 69999999744
No 165
>KOG0642 consensus Cell-cycle nuclear protein, contains WD-40 repeats [Cell cycle control, cell division, chromosome partitioning]
Probab=99.75 E-value=1.5e-17 Score=158.77 Aligned_cols=249 Identities=23% Similarity=0.360 Sum_probs=175.5
Q ss_pred EeecCccceEEEEEc--CCEEEEEeCCCcEEEEeCC--------CCeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCc
Q 008820 247 DLQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLK--------DFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGG 316 (552)
Q Consensus 247 ~l~~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~--------~~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~ 316 (552)
++..|.+.|+.++|+ ...|++|+.||++++|+++ .-+++.+|.+|.++|.|+++.+++. .+++|+.||+
T Consensus 289 tl~s~~d~ir~l~~~~sep~lit~sed~~lk~WnLqk~~~s~~~~~epi~tfraH~gPVl~v~v~~n~~-~~ysgg~Dg~ 367 (577)
T KOG0642|consen 289 TLRSHDDCIRALAFHPSEPVLITASEDGTLKLWNLQKAKKSAEKDVEPILTFRAHEGPVLCVVVPSNGE-HCYSGGIDGT 367 (577)
T ss_pred eeecchhhhhhhhcCCCCCeEEEeccccchhhhhhcccCCccccceeeeEEEecccCceEEEEecCCce-EEEeeccCce
Confidence 678999999999998 8999999999999999993 2367899999999999999977554 7899999999
Q ss_pred EEEEeCCCCCCCcc-------ccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCceeEEecCC--CCCeEE
Q 008820 317 IFVWSFSFPLGHEP-------LKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGH--KSAVST 387 (552)
Q Consensus 317 i~vwd~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h--~~~v~~ 387 (552)
|+.|++........ ...+.++.+. ....+++.....|++++.||+++.|+.....+ .++... .+.-.+
T Consensus 368 I~~w~~p~n~dp~ds~dp~vl~~~l~Ghtda--vw~l~~s~~~~~Llscs~DgTvr~w~~~~~~~-~~f~~~~e~g~Pls 444 (577)
T KOG0642|consen 368 IRCWNLPPNQDPDDSYDPSVLSGTLLGHTDA--VWLLALSSTKDRLLSCSSDGTVRLWEPTEESP-CTFGEPKEHGYPLS 444 (577)
T ss_pred eeeeccCCCCCcccccCcchhccceeccccc--eeeeeecccccceeeecCCceEEeeccCCcCc-cccCCccccCCcce
Confidence 99998763222111 1122222221 11346667777899999999999999876665 344322 223355
Q ss_pred EEEeCC---EEEEEeCCCcEEEEECCCCceeEEEecCCCC-----ceEEEEEEcCCCCEEEEEECCCcEEEEeC--Ccce
Q 008820 388 LAVCNG---VLYSGSRDGTIRLWSLSDHSLLTVLEEDSSG-----AVSSVLSLTAVQHTLVVSHESGSIKVWRN--DKFM 457 (552)
Q Consensus 388 l~~~~~---~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~-----~~~~~~~~s~~~~~l~~g~~dg~i~iwd~--~~~~ 457 (552)
+.+-.. ..++...-+.--+.++.....+..+...... .....+...|...+.+++..|+.|+++|. +.++
T Consensus 445 vd~~ss~~a~~~~s~~~~~~~~~~~ev~s~~~~~~s~~~~~~~~~~~in~vVs~~~~~~~~~~hed~~Ir~~dn~~~~~l 524 (577)
T KOG0642|consen 445 VDRTSSRPAHSLASFRFGYTSIDDMEVVSDLLIFESSASPGPRRYPQINKVVSHPTADITFTAHEDRSIRFFDNKTGKIL 524 (577)
T ss_pred EeeccchhHhhhhhcccccccchhhhhhhheeeccccCCCcccccCccceEEecCCCCeeEecccCCceecccccccccc
Confidence 666533 3333333333334444444444444322111 11222466788889999999999999994 5678
Q ss_pred eeeecccceEEEEEe--cCCEEEEEeCCCeEEEEecCCCeeeee
Q 008820 458 KSMQTHKGSVFAVFL--EGKWLFTGGWDKTVSVQELAGDEFEED 499 (552)
Q Consensus 458 ~~~~~h~~~v~~v~~--~~~~l~sgs~dg~i~iwd~~~~~~~~~ 499 (552)
.....|...++++++ +|-+|++++.|+.+++|.+....+...
T Consensus 525 ~s~~a~~~svtslai~~ng~~l~s~s~d~sv~l~kld~k~~~~e 568 (577)
T KOG0642|consen 525 HSMVAHKDSVTSLAIDPNGPYLMSGSHDGSVRLWKLDVKTCVLE 568 (577)
T ss_pred hheeeccceecceeecCCCceEEeecCCceeehhhccchheeec
Confidence 888899999998876 899999999999999999976655443
No 166
>KOG0303 consensus Actin-binding protein Coronin, contains WD40 repeats [Cytoskeleton]
Probab=99.75 E-value=1.1e-16 Score=146.44 Aligned_cols=245 Identities=13% Similarity=0.198 Sum_probs=167.8
Q ss_pred EEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCcc----ccccccCCCceeeeEEEEeeC-CCEEEEeeCC
Q 008820 287 TFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEP----LKKWNEEKDWRYSGIHALTTS-GRYLYTGSGD 361 (552)
Q Consensus 287 ~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~-~~~l~sgs~d 361 (552)
.+.||+++|..++|.|.+...+++||.|.+|.||++..+..... +..+.+|. ....+..++|. .+.|++++.|
T Consensus 76 ~v~GHt~~vLDi~w~PfnD~vIASgSeD~~v~vW~IPe~~l~~~ltepvv~L~gH~--rrVg~V~wHPtA~NVLlsag~D 153 (472)
T KOG0303|consen 76 LVCGHTAPVLDIDWCPFNDCVIASGSEDTKVMVWQIPENGLTRDLTEPVVELYGHQ--RRVGLVQWHPTAPNVLLSAGSD 153 (472)
T ss_pred CccCccccccccccCccCCceeecCCCCceEEEEECCCcccccCcccceEEEeecc--eeEEEEeecccchhhHhhccCC
Confidence 34689999999999999999999999999999999976543332 33333333 33445566665 4589999999
Q ss_pred CcEEEEECCCCceeEEecCCCCCeEEEEEe--CCEEEEEeCCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEE
Q 008820 362 RTIKAWSLLDGTLSCTMSGHKSAVSTLAVC--NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTL 439 (552)
Q Consensus 362 g~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l 439 (552)
.+|.+||+.+|+.+.++. |...|.++.|+ ++++++.+.|..|||||.++++.+..-..|. +......-|-.++..+
T Consensus 154 n~v~iWnv~tgeali~l~-hpd~i~S~sfn~dGs~l~TtckDKkvRv~dpr~~~~v~e~~~he-G~k~~Raifl~~g~i~ 231 (472)
T KOG0303|consen 154 NTVSIWNVGTGEALITLD-HPDMVYSMSFNRDGSLLCTTCKDKKVRVIDPRRGTVVSEGVAHE-GAKPARAIFLASGKIF 231 (472)
T ss_pred ceEEEEeccCCceeeecC-CCCeEEEEEeccCCceeeeecccceeEEEcCCCCcEeeeccccc-CCCcceeEEeccCcee
Confidence 999999999999998888 99999999999 4599999999999999999999998885553 4433335666778755
Q ss_pred EEEE---CCCcEEEEeCCc---ce--eeeecccceEEEE-EecCCEEE-EEeCCCeEEEEecCCCeeeeeeccCCCcccC
Q 008820 440 VVSH---ESGSIKVWRNDK---FM--KSMQTHKGSVFAV-FLEGKWLF-TGGWDKTVSVQELAGDEFEEDVIPTGAIPCG 509 (552)
Q Consensus 440 ~~g~---~dg~i~iwd~~~---~~--~~~~~h~~~v~~v-~~~~~~l~-sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 509 (552)
.+|- ++..+-+||... ++ ..+....+-..-+ ..|.+.++ +|-.|+.|+.|.+............ ....
T Consensus 232 tTGfsr~seRq~aLwdp~nl~eP~~~~elDtSnGvl~PFyD~dt~ivYl~GKGD~~IRYyEit~d~P~~hyln~--f~S~ 309 (472)
T KOG0303|consen 232 TTGFSRMSERQIALWDPNNLEEPIALQELDTSNGVLLPFYDPDTSIVYLCGKGDSSIRYFEITNEPPFVHYLNT--FSSK 309 (472)
T ss_pred eeccccccccceeccCcccccCcceeEEeccCCceEEeeecCCCCEEEEEecCCcceEEEEecCCCceeEEecc--cccC
Confidence 5553 478899998543 32 2333333322222 12555555 5557999999999876522222111 1123
Q ss_pred cceEEEEEeCCeEEEEeCCCeEEEEEec
Q 008820 510 SVITALLYWQGKLFVGCADRTVKIALCN 537 (552)
Q Consensus 510 ~~v~~l~~~~~~l~s~s~Dg~v~iw~~~ 537 (552)
.+-..+.+-|.+-+-.+..-..|+|.+.
T Consensus 310 epQRG~g~mPKRGl~Vs~cEI~rfyKl~ 337 (472)
T KOG0303|consen 310 EPQRGMGFMPKRGLDVSKCEIARFYKLH 337 (472)
T ss_pred CccccccccccccccchHHHHHHHHHhh
Confidence 3445555656554444443344444443
No 167
>KOG1009 consensus Chromatin assembly complex 1 subunit B/CAC2 (contains WD40 repeats) [Chromatin structure and dynamics; Replication, recombination and repair]
Probab=99.74 E-value=9.2e-16 Score=140.98 Aligned_cols=279 Identities=20% Similarity=0.196 Sum_probs=190.4
Q ss_pred ccceEEEEEc---CCEEEEEeCCCcEEEEeCCCC---------eEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEE
Q 008820 252 RDCVTGLAVG---GGFLFSSSFDKSIHVWSLKDF---------SHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFV 319 (552)
Q Consensus 252 ~~~V~~l~~s---~~~l~s~s~dg~I~iwd~~~~---------~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~v 319 (552)
..+|.++.|. .+.++||+.|..|++|.++.. +....+..|...|+++.|+|+++ ++++|+.+|.|.+
T Consensus 13 ~~pv~s~dfq~n~~~~laT~G~D~~iriW~v~r~~~~~~~~~V~y~s~Ls~H~~aVN~vRf~p~ge-lLASg~D~g~v~l 91 (434)
T KOG1009|consen 13 HEPVYSVDFQKNSLNKLATAGGDKDIRIWKVNRSEPGGGDMKVEYLSSLSRHTRAVNVVRFSPDGE-LLASGGDGGEVFL 91 (434)
T ss_pred CCceEEEEeccCcccceecccCccceeeeeeeecCCCCCceeEEEeecccCCcceeEEEEEcCCcC-eeeecCCCceEEE
Confidence 4678999998 448999999999999987532 23456778999999999999776 8899999999999
Q ss_pred EeCCCCCCC------------cc-ccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeE
Q 008820 320 WSFSFPLGH------------EP-LKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVS 386 (552)
Q Consensus 320 wd~~~~~~~------------~~-~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~ 386 (552)
|........ .. .+....+.... --.+++++++++++++.|..+++||+..|+....+..|...+.
T Consensus 92 Wk~~~~~~~~~d~e~~~~ke~w~v~k~lr~h~~di--ydL~Ws~d~~~l~s~s~dns~~l~Dv~~G~l~~~~~dh~~yvq 169 (434)
T KOG1009|consen 92 WKQGDVRIFDADTEADLNKEKWVVKKVLRGHRDDI--YDLAWSPDSNFLVSGSVDNSVRLWDVHAGQLLAILDDHEHYVQ 169 (434)
T ss_pred EEecCcCCccccchhhhCccceEEEEEecccccch--hhhhccCCCceeeeeeccceEEEEEeccceeEeeccccccccc
Confidence 976621110 00 00111111100 0136788999999999999999999999999999999999999
Q ss_pred EEEEe--CCEEEEEeCCCcEEEEECCCCceeEEEe---------cCCCCce------------EEEEEEcCCCCEEEEEE
Q 008820 387 TLAVC--NGVLYSGSRDGTIRLWSLSDHSLLTVLE---------EDSSGAV------------SSVLSLTAVQHTLVVSH 443 (552)
Q Consensus 387 ~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~---------~~~~~~~------------~~~~~~s~~~~~l~~g~ 443 (552)
.++|. +.++++-+.|...+.+++...+.++... .+..+.. ...++|+|+|.++++..
T Consensus 170 gvawDpl~qyv~s~s~dr~~~~~~~~~~~~~~~~~~~~m~~~~~~~~e~~s~rLfhDeTlksFFrRlsfTPdG~llvtPa 249 (434)
T KOG1009|consen 170 GVAWDPLNQYVASKSSDRHPEGFSAKLKQVIKRHGLDIMPAKAFNEREGKSTRLFHDETLKSFFRRLSFTPDGSLLVTPA 249 (434)
T ss_pred eeecchhhhhhhhhccCcccceeeeeeeeeeeeeeeeEeeecccCCCCcceeeeeecCchhhhhhhcccCCCCcEEEccc
Confidence 99999 5689998988888777776544332222 0101111 11257899999998754
Q ss_pred C----CC-----cEEEEe---CCcceeeeecccceEEEEEe--------------------cCCEEEEEeCCCeEEEEec
Q 008820 444 E----SG-----SIKVWR---NDKFMKSMQTHKGSVFAVFL--------------------EGKWLFTGGWDKTVSVQEL 491 (552)
Q Consensus 444 ~----dg-----~i~iwd---~~~~~~~~~~h~~~v~~v~~--------------------~~~~l~sgs~dg~i~iwd~ 491 (552)
. .+ ..++|+ +..+...+.+...+...+.+ -+..++.++ .+.|++||.
T Consensus 250 g~~~~g~~~~~n~tYvfsrk~l~rP~~~lp~~~k~~lavr~~pVy~elrp~~~~~~~~~lpyrlvfaiAt-~~svyvydt 328 (434)
T KOG1009|consen 250 GLFKVGGGVFRNTSYVFSRKDLKRPAARLPSPKKPALAVRFSPVYYELRPLSSEKFLFVLPYRLVFAIAT-KNSVYVYDT 328 (434)
T ss_pred ceeeeCCceeeceeEeeccccccCceeecCCCCcceEEEEeeeeEEEeccccccccccccccceEEEEee-cceEEEecc
Confidence 2 22 335554 34444444444433332221 122445555 568999999
Q ss_pred CCCeeeeeeccCCCcccCcceEEEEEeCC--eEEEEeCCCeEEEEEecC
Q 008820 492 AGDEFEEDVIPTGAIPCGSVITALLYWQG--KLFVGCADRTVKIALCNR 538 (552)
Q Consensus 492 ~~~~~~~~~~~~~~~~~~~~v~~l~~~~~--~l~s~s~Dg~v~iw~~~~ 538 (552)
++-......... +-..++.++|+++ .|+..|.||...+-.+++
T Consensus 329 q~~~P~~~v~ni----hy~~iTDiaws~dg~~l~vSS~DGyCS~vtfe~ 373 (434)
T KOG1009|consen 329 QTLEPLAVVDNI----HYSAITDIAWSDDGSVLLVSSTDGFCSLVTFEP 373 (434)
T ss_pred ccccceEEEeee----eeeeecceeecCCCcEEEEeccCCceEEEEEcc
Confidence 875444433322 2567999999965 599999999988877763
No 168
>COG2319 FOG: WD40 repeat [General function prediction only]
Probab=99.74 E-value=2.1e-14 Score=145.60 Aligned_cols=284 Identities=27% Similarity=0.472 Sum_probs=210.7
Q ss_pred EeecCccceEEEEEc--CCEEEEEeCCCcEEEEeCCCCe-EEEEEeCCCC-CeEEEEE-ecCCCCEEEEEc-CCCcEEEE
Q 008820 247 DLQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFS-HVHTFKGHDH-KVMAVVY-VDEDQPLCISGD-SGGGIFVW 320 (552)
Q Consensus 247 ~l~~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~~-~~~~~~~h~~-~v~~v~~-~~~~~~~l~s~~-~dg~i~vw 320 (552)
.+.+|...|.++.+. +..++.++.|+.+.+|+...+. ....+..+.. .+..+.+ .+++...++..+ .|+.+.+|
T Consensus 60 ~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 139 (466)
T COG2319 60 LLRGHEDSITSIAFSPDGELLLSGSSDGTIKLWDLDNGEKLIKSLEGLHDSSVSKLALSSPDGNSILLASSSLDGTVKLW 139 (466)
T ss_pred eeeeccceEEEEEECCCCcEEEEecCCCcEEEEEcCCCceeEEEEeccCCCceeeEEEECCCcceEEeccCCCCccEEEE
Confidence 466899999999999 8888889999999999998886 6777776443 7777777 666653445544 49999999
Q ss_pred eCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeC-CCcEEEEECCCCceeEEecCCCCCeEEEEEe-CC--EEE
Q 008820 321 SFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSG-DRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC-NG--VLY 396 (552)
Q Consensus 321 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~-dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~-~~--~l~ 396 (552)
+.... .........+.. .....++++++..+++++. |+.+++|+...+..+..+.+|...|.+++|+ ++ .++
T Consensus 140 ~~~~~--~~~~~~~~~~~~--~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 215 (466)
T COG2319 140 DLSTP--GKLIRTLEGHSE--SVTSLAFSPDGKLLASGSSLDGTIKLWDLRTGKPLSTLAGHTDPVSSLAFSPDGGLLIA 215 (466)
T ss_pred EecCC--CeEEEEEecCcc--cEEEEEECCCCCEEEecCCCCCceEEEEcCCCceEEeeccCCCceEEEEEcCCcceEEE
Confidence 99851 111222222221 1124588888888888885 9999999999989999999999999999999 33 455
Q ss_pred EEeCCCcEEEEECCCCceeE-EEecCCCCceEEEEEEcCCCCEEEEEECCCcEEEEeCCcc---eeeeecccceEEEEEe
Q 008820 397 SGSRDGTIRLWSLSDHSLLT-VLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDKF---MKSMQTHKGSVFAVFL 472 (552)
Q Consensus 397 s~~~dg~i~iwd~~~~~~~~-~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~~~---~~~~~~h~~~v~~v~~ 472 (552)
+++.|+.|++||...+.... .+..+.... . ..|++++..+++++.|+.+++|+.... ...+..|...+.++.+
T Consensus 216 ~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 292 (466)
T COG2319 216 SGSSDGTIRLWDLSTGKLLRSTLSGHSDSV-V--SSFSPDGSLLASGSSDGTIRLWDLRSSSSLLRTLSGHSSSVLSVAF 292 (466)
T ss_pred EecCCCcEEEEECCCCcEEeeecCCCCcce-e--EeECCCCCEEEEecCCCcEEEeeecCCCcEEEEEecCCccEEEEEE
Confidence 55999999999999777777 455553322 2 379999988999999999999996532 3344578888988877
Q ss_pred --cCCEEEEEeCCCeEEEEecCCCeeeeeeccCCCcccCcceEEEEEeC--CeEEEE-eCCCeEEEEEecCCc
Q 008820 473 --EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQ--GKLFVG-CADRTVKIALCNRQI 540 (552)
Q Consensus 473 --~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~~--~~l~s~-s~Dg~v~iw~~~~~~ 540 (552)
++..+++++.|+.+++||..+........ ...+...+..+.+.+ ..++.+ ..|+.+++|+.....
T Consensus 293 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 362 (466)
T COG2319 293 SPDGKLLASGSSDGTVRLWDLETGKLLSSLT---LKGHEGPVSSLSFSPDGSLLVSGGSDDGTIRLWDLRTGK 362 (466)
T ss_pred CCCCCEEEEeeCCCcEEEEEcCCCceEEEee---ecccCCceEEEEECCCCCEEEEeecCCCcEEeeecCCCc
Confidence 56888889999999999988776554443 111233577777732 345555 688999999998544
No 169
>KOG1007 consensus WD repeat protein TSSC1, WD repeat superfamily [Function unknown]
Probab=99.74 E-value=4.3e-16 Score=136.84 Aligned_cols=266 Identities=18% Similarity=0.242 Sum_probs=188.2
Q ss_pred CCcEEEEeCCCCeE---EEEEeCCCCCeEEEEEecCCCCEEEEEcCC-------CcEEEEeCCCCCCCccc------ccc
Q 008820 271 DKSIHVWSLKDFSH---VHTFKGHDHKVMAVVYVDEDQPLCISGDSG-------GGIFVWSFSFPLGHEPL------KKW 334 (552)
Q Consensus 271 dg~I~iwd~~~~~~---~~~~~~h~~~v~~v~~~~~~~~~l~s~~~d-------g~i~vwd~~~~~~~~~~------~~~ 334 (552)
|+.|.+-+++.+.. .+.|..|.+.|..++-+|.+..+|+++..+ ..+-||.+..+...... ..+
T Consensus 39 dNqVhll~~d~e~s~l~skvf~h~agEvw~las~P~d~~ilaT~yn~~s~s~vl~~aaiw~ipe~~~~S~~~tlE~v~~L 118 (370)
T KOG1007|consen 39 DNQVHLLRLDSEGSELLSKVFFHHAGEVWDLASSPFDQRILATVYNDTSDSGVLTGAAIWQIPEPLGQSNSSTLECVASL 118 (370)
T ss_pred cceeEEEEecCccchhhhhhhhcCCcceehhhcCCCCCceEEEEEeccCCCcceeeEEEEecccccCccccchhhHhhcC
Confidence 56677776654332 345677889999999999999999988653 24679998765433211 111
Q ss_pred ccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCce-eEEec-----CCCCCeEEEEEe---CCEEEEEeCCCcEE
Q 008820 335 NEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTL-SCTMS-----GHKSAVSTLAVC---NGVLYSGSRDGTIR 405 (552)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~-~~~~~-----~h~~~v~~l~~~---~~~l~s~~~dg~i~ 405 (552)
....- ....+.-+.|++..+++-. |..|.+|++..+.. +..+. .+....++-+|+ ++.-+....|+++.
T Consensus 119 dteav-g~i~cvew~Pns~klasm~-dn~i~l~~l~ess~~vaev~ss~s~e~~~~ftsg~WspHHdgnqv~tt~d~tl~ 196 (370)
T KOG1007|consen 119 DTEAV-GKINCVEWEPNSDKLASMD-DNNIVLWSLDESSKIVAEVLSSESAEMRHSFTSGAWSPHHDGNQVATTSDSTLQ 196 (370)
T ss_pred CHHHh-CceeeEEEcCCCCeeEEec-cCceEEEEcccCcchheeecccccccccceecccccCCCCccceEEEeCCCcEE
Confidence 11111 1224556778888888765 78899999987765 33332 345567778887 44555566789999
Q ss_pred EEECCCCceeEEEecCCCCceEEEEEEcCCCC-EEEEEECCCcEEEEeCCc---ceeeeecccceEEEEEe---cCCEEE
Q 008820 406 LWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQH-TLVVSHESGSIKVWRNDK---FMKSMQTHKGSVFAVFL---EGKWLF 478 (552)
Q Consensus 406 iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~-~l~~g~~dg~i~iwd~~~---~~~~~~~h~~~v~~v~~---~~~~l~ 478 (552)
.||+|+.+....+...|...+.. +.|+|+.. +|++|+.||.|+|||.++ +++.+.+|..+|.++.| ..++++
T Consensus 197 ~~D~RT~~~~~sI~dAHgq~vrd-lDfNpnkq~~lvt~gDdgyvriWD~R~tk~pv~el~~HsHWvW~VRfn~~hdqLiL 275 (370)
T KOG1007|consen 197 FWDLRTMKKNNSIEDAHGQRVRD-LDFNPNKQHILVTCGDDGYVRIWDTRKTKFPVQELPGHSHWVWAVRFNPEHDQLIL 275 (370)
T ss_pred EEEccchhhhcchhhhhcceeee-ccCCCCceEEEEEcCCCccEEEEeccCCCccccccCCCceEEEEEEecCccceEEE
Confidence 99999999888888776555555 68888754 678899999999999764 78889999999999998 578999
Q ss_pred EEeCCCeEEEEecCCCee--------------------eeeeccC----CCcccCcceEEEEEeC---CeEEEEeCCCeE
Q 008820 479 TGGWDKTVSVQELAGDEF--------------------EEDVIPT----GAIPCGSVITALLYWQ---GKLFVGCADRTV 531 (552)
Q Consensus 479 sgs~dg~i~iwd~~~~~~--------------------~~~~~~~----~~~~~~~~v~~l~~~~---~~l~s~s~Dg~v 531 (552)
+||.|..|.+|....-.- ....... ..-.+...|.+++|+. =.+++-+.||.+
T Consensus 276 s~~SDs~V~Lsca~svSSE~qi~~~~dese~e~~dseer~kpL~dg~l~tydehEDSVY~~aWSsadPWiFASLSYDGRv 355 (370)
T KOG1007|consen 276 SGGSDSAVNLSCASSVSSEQQIEFEDDESESEDEDSEERVKPLQDGQLETYDEHEDSVYALAWSSADPWIFASLSYDGRV 355 (370)
T ss_pred ecCCCceeEEEeccccccccccccccccccCcchhhHHhcccccccccccccccccceEEEeeccCCCeeEEEeccCceE
Confidence 999999999996532110 0000000 1123577899999993 348899999999
Q ss_pred EEEEecCC
Q 008820 532 KIALCNRQ 539 (552)
Q Consensus 532 ~iw~~~~~ 539 (552)
.|=++++.
T Consensus 356 iIs~V~r~ 363 (370)
T KOG1007|consen 356 IISSVPRF 363 (370)
T ss_pred EeecCChh
Confidence 99887643
No 170
>KOG4227 consensus WD40 repeat protein [General function prediction only]
Probab=99.74 E-value=2.5e-16 Score=143.71 Aligned_cols=291 Identities=10% Similarity=0.054 Sum_probs=196.6
Q ss_pred EEEEEeecCccceEEEEEc--CCEEEEEeCCCcEEEEeCC------CCeEEEEEeC-CCCCeEEEEEecCCCCEEEEEcC
Q 008820 243 VKFKDLQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLK------DFSHVHTFKG-HDHKVMAVVYVDEDQPLCISGDS 313 (552)
Q Consensus 243 ~~~~~l~~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~------~~~~~~~~~~-h~~~v~~v~~~~~~~~~l~s~~~ 313 (552)
.+..++.+|.+.|+++.|+ +++|++|+.|..+++|+++ +.+++..... |...|.|++|.. ++..+++|..
T Consensus 47 ~~qKD~~~H~GCiNAlqFS~N~~~L~SGGDD~~~~~W~~de~~~~k~~KPI~~~~~~H~SNIF~L~F~~-~N~~~~SG~~ 125 (609)
T KOG4227|consen 47 FCQKDVREHTGCINALQFSHNDRFLASGGDDMHGRVWNVDELMVRKTPKPIGVMEHPHRSNIFSLEFDL-ENRFLYSGER 125 (609)
T ss_pred hhhhhhhhhccccceeeeccCCeEEeecCCcceeeeechHHHHhhcCCCCceeccCccccceEEEEEcc-CCeeEecCCC
Confidence 3445688999999999999 9999999999999999985 3456665543 568999999976 6668899999
Q ss_pred CCcEEEEeCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCc-eeE--EecCCCCCeEEEEE
Q 008820 314 GGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGT-LSC--TMSGHKSAVSTLAV 390 (552)
Q Consensus 314 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~-~~~--~~~~h~~~v~~l~~ 390 (552)
+++|..-|+++.+....... .......--...+|..+.+++.+.+|.|.+||.+..+ ++. ..........++.|
T Consensus 126 ~~~VI~HDiEt~qsi~V~~~---~~~~~~VY~m~~~P~DN~~~~~t~~~~V~~~D~Rd~~~~~~~~~~AN~~~~F~t~~F 202 (609)
T KOG4227|consen 126 WGTVIKHDIETKQSIYVANE---NNNRGDVYHMDQHPTDNTLIVVTRAKLVSFIDNRDRQNPISLVLPANSGKNFYTAEF 202 (609)
T ss_pred cceeEeeecccceeeeeecc---cCcccceeecccCCCCceEEEEecCceEEEEeccCCCCCCceeeecCCCccceeeee
Confidence 99999999997644332221 1111111123456667899999999999999998654 222 22334556778888
Q ss_pred e---CCEEEEEeCCCcEEEEECCCCc-eeEEEecC----CCCceEEEEEEcCCCCEEEEEECCCcEEEEeCCc-ceeeee
Q 008820 391 C---NGVLYSGSRDGTIRLWSLSDHS-LLTVLEED----SSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDK-FMKSMQ 461 (552)
Q Consensus 391 ~---~~~l~s~~~dg~i~iwd~~~~~-~~~~~~~~----~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~~-~~~~~~ 461 (552)
+ +.+|++.+..+-+-+||.+... .+...... ..........|+|+|+.+.+--....-.+||.-. ....++
T Consensus 203 ~P~~P~Li~~~~~~~G~~~~D~R~~~~~~~~~~~~~~L~~~~~~~M~~~~~~~G~Q~msiRR~~~P~~~D~~S~R~~V~k 282 (609)
T KOG4227|consen 203 HPETPALILVNSETGGPNVFDRRMQARPVYQRSMFKGLPQENTEWMGSLWSPSGNQFMSIRRGKCPLYFDFISQRCFVLK 282 (609)
T ss_pred cCCCceeEEeccccCCCCceeeccccchHHhhhccccCcccchhhhheeeCCCCCeehhhhccCCCEEeeeecccceeEe
Confidence 8 4499999999999999998654 22222111 1111122257899999988876666666777432 222232
Q ss_pred c-cc-------ceEEEEEe-cCCEEEEEeCCCeEEEEecCCCeeeeeeccCC------------------CcccCcceEE
Q 008820 462 T-HK-------GSVFAVFL-EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTG------------------AIPCGSVITA 514 (552)
Q Consensus 462 ~-h~-------~~v~~v~~-~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~------------------~~~~~~~v~~ 514 (552)
. |. ..+.++.| +...+++|+.+-.|++|.+....-..-+...+ -..+.+.++.
T Consensus 283 ~D~N~~GY~N~~T~KS~~F~~D~~v~tGSD~~~i~~WklP~~~ds~G~~~IG~~~~~~~~~~~i~~~~~VLrGHRSv~NQ 362 (609)
T KOG4227|consen 283 SDHNPNGYCNIKTIKSMTFIDDYTVATGSDHWGIHIWKLPRANDSYGFTQIGHDEEEMPSEIFIEKELTVLRGHRSVPNQ 362 (609)
T ss_pred ccCCCCcceeeeeeeeeeeecceeeeccCcccceEEEecCCCccccCccccCcchhhCchhheecceeEEEecccccccc
Confidence 2 21 23445666 66779999999999999875221110000000 0124667888
Q ss_pred EEEeC--CeEEEEeCCCeEEEEEec
Q 008820 515 LLYWQ--GKLFVGCADRTVKIALCN 537 (552)
Q Consensus 515 l~~~~--~~l~s~s~Dg~v~iw~~~ 537 (552)
+.|++ ..|++.+....++||.-.
T Consensus 363 VRF~~H~~~l~SSGVE~~~KlWS~~ 387 (609)
T KOG4227|consen 363 VRFSQHNNLLVSSGVENSFKLWSDH 387 (609)
T ss_pred eeecCCcceEeccchhhheeccccc
Confidence 99985 458888899999999754
No 171
>KOG1007 consensus WD repeat protein TSSC1, WD repeat superfamily [Function unknown]
Probab=99.73 E-value=4e-16 Score=137.06 Aligned_cols=242 Identities=17% Similarity=0.228 Sum_probs=170.5
Q ss_pred EEeecCccceEEEEEc---CCEEEEEeCC-------CcEEEEeCCCC---------eEEEEEe-CCCCCeEEEEEecCCC
Q 008820 246 KDLQGHRDCVTGLAVG---GGFLFSSSFD-------KSIHVWSLKDF---------SHVHTFK-GHDHKVMAVVYVDEDQ 305 (552)
Q Consensus 246 ~~l~~H~~~V~~l~~s---~~~l~s~s~d-------g~I~iwd~~~~---------~~~~~~~-~h~~~v~~v~~~~~~~ 305 (552)
..|..|.+.|+.++-+ .+.|+|+..| ..+-||.+... +++..+. .+-+.|.|+.|.|++.
T Consensus 57 kvf~h~agEvw~las~P~d~~ilaT~yn~~s~s~vl~~aaiw~ipe~~~~S~~~tlE~v~~Ldteavg~i~cvew~Pns~ 136 (370)
T KOG1007|consen 57 KVFFHHAGEVWDLASSPFDQRILATVYNDTSDSGVLTGAAIWQIPEPLGQSNSSTLECVASLDTEAVGKINCVEWEPNSD 136 (370)
T ss_pred hhhhcCCcceehhhcCCCCCceEEEEEeccCCCcceeeEEEEecccccCccccchhhHhhcCCHHHhCceeeEEEcCCCC
Confidence 3467788899999887 6667776553 23679988642 2333343 3556899999999766
Q ss_pred CEEEEEcCCCcEEEEeCCCCCCC-ccccccccCCCceeeeEEEEee--CCCEEEEeeCCCcEEEEECCCCceeEEe-cCC
Q 008820 306 PLCISGDSGGGIFVWSFSFPLGH-EPLKKWNEEKDWRYSGIHALTT--SGRYLYTGSGDRTIKAWSLLDGTLSCTM-SGH 381 (552)
Q Consensus 306 ~~l~s~~~dg~i~vwd~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~l~sgs~dg~i~iwd~~~~~~~~~~-~~h 381 (552)
.+ ++-. |..|.+|+++..... ..+.........+....-.++| +++.+++. .|+++..||+++.+....+ .+|
T Consensus 137 kl-asm~-dn~i~l~~l~ess~~vaev~ss~s~e~~~~ftsg~WspHHdgnqv~tt-~d~tl~~~D~RT~~~~~sI~dAH 213 (370)
T KOG1007|consen 137 KL-ASMD-DNNIVLWSLDESSKIVAEVLSSESAEMRHSFTSGAWSPHHDGNQVATT-SDSTLQFWDLRTMKKNNSIEDAH 213 (370)
T ss_pred ee-EEec-cCceEEEEcccCcchheeecccccccccceecccccCCCCccceEEEe-CCCcEEEEEccchhhhcchhhhh
Confidence 54 4333 899999999876652 2221111111111222234555 56667665 5699999999998877766 568
Q ss_pred CCCeEEEEEeCC---EEEEEeCCCcEEEEECCCCc-eeEEEecCCCCceEEEEEEcCC-CCEEEEEECCCcEEEEeCC--
Q 008820 382 KSAVSTLAVCNG---VLYSGSRDGTIRLWSLSDHS-LLTVLEEDSSGAVSSVLSLTAV-QHTLVVSHESGSIKVWRND-- 454 (552)
Q Consensus 382 ~~~v~~l~~~~~---~l~s~~~dg~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~s~~-~~~l~~g~~dg~i~iwd~~-- 454 (552)
...|..+.|+++ +|++|+.||.|++||.|..+ ++..+..| ...+.++ .|+|. ..++++|+.|..|.+|...
T Consensus 214 gq~vrdlDfNpnkq~~lvt~gDdgyvriWD~R~tk~pv~el~~H-sHWvW~V-Rfn~~hdqLiLs~~SDs~V~Lsca~sv 291 (370)
T KOG1007|consen 214 GQRVRDLDFNPNKQHILVTCGDDGYVRIWDTRKTKFPVQELPGH-SHWVWAV-RFNPEHDQLILSGGSDSAVNLSCASSV 291 (370)
T ss_pred cceeeeccCCCCceEEEEEcCCCccEEEEeccCCCccccccCCC-ceEEEEE-EecCccceEEEecCCCceeEEEecccc
Confidence 889999999954 89999999999999998765 45555554 4556664 66654 5688899999999999521
Q ss_pred -----------------------------cceeeeecccceEEEEEe---cCCEEEEEeCCCeEEEEecC
Q 008820 455 -----------------------------KFMKSMQTHKGSVFAVFL---EGKWLFTGGWDKTVSVQELA 492 (552)
Q Consensus 455 -----------------------------~~~~~~~~h~~~v~~v~~---~~~~l~sgs~dg~i~iwd~~ 492 (552)
..+.++..|...|++++| |.-.+++-|.||.+.|=.+.
T Consensus 292 SSE~qi~~~~dese~e~~dseer~kpL~dg~l~tydehEDSVY~~aWSsadPWiFASLSYDGRviIs~V~ 361 (370)
T KOG1007|consen 292 SSEQQIEFEDDESESEDEDSEERVKPLQDGQLETYDEHEDSVYALAWSSADPWIFASLSYDGRVIISSVP 361 (370)
T ss_pred ccccccccccccccCcchhhHHhcccccccccccccccccceEEEeeccCCCeeEEEeccCceEEeecCC
Confidence 123466779999999999 66688999999999887664
No 172
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.72 E-value=2.9e-15 Score=155.05 Aligned_cols=254 Identities=17% Similarity=0.222 Sum_probs=174.3
Q ss_pred eCCCeEEEEEeecCccceEEEEEc---CCEEEEEeCCCcEEEEeCCC-------CeEEEEEeCCCCCeEEEEEecCCCCE
Q 008820 238 LSKGNVKFKDLQGHRDCVTGLAVG---GGFLFSSSFDKSIHVWSLKD-------FSHVHTFKGHDHKVMAVVYVDEDQPL 307 (552)
Q Consensus 238 ~~~~~~~~~~l~~H~~~V~~l~~s---~~~l~s~s~dg~I~iwd~~~-------~~~~~~~~~h~~~v~~v~~~~~~~~~ 307 (552)
+...++.+..+..|+..|..++.+ +.+++|||.||+||+||... .+...++....+.+.++...+.+. .
T Consensus 1034 W~p~G~lVAhL~Ehs~~v~k~a~s~~~~s~FvsgS~DGtVKvW~~~k~~~~~~s~rS~ltys~~~sr~~~vt~~~~~~-~ 1112 (1431)
T KOG1240|consen 1034 WNPRGILVAHLHEHSSAVIKLAVSSEHTSLFVSGSDDGTVKVWNLRKLEGEGGSARSELTYSPEGSRVEKVTMCGNGD-Q 1112 (1431)
T ss_pred CCccceEeehhhhccccccceeecCCCCceEEEecCCceEEEeeehhhhcCcceeeeeEEEeccCCceEEEEeccCCC-e
Confidence 344567788899999999999998 58999999999999999853 233444544567888888877655 5
Q ss_pred EEEEcCCCcEEEEeCCCCCCCc----cccccccCCCceeeeEEEEeeC-CC-EEEEeeCCCcEEEEECCCCceeEEec--
Q 008820 308 CISGDSGGGIFVWSFSFPLGHE----PLKKWNEEKDWRYSGIHALTTS-GR-YLYTGSGDRTIKAWSLLDGTLSCTMS-- 379 (552)
Q Consensus 308 l~s~~~dg~i~vwd~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~-~~-~l~sgs~dg~i~iwd~~~~~~~~~~~-- 379 (552)
+|.++.||.|++.+++...... ..+..+.+.......+.++... .. .++.+..-+.|..||+++....++++
T Consensus 1113 ~Av~t~DG~v~~~~id~~~~~~~~~~~~ri~n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv~~D~r~~~~~w~lk~~ 1192 (1431)
T KOG1240|consen 1113 FAVSTKDGSVRVLRIDHYNVSKRVATQVRIPNLKKDGVVVSMHAFTAIVQSHVLVYATDLSRIVSWDTRMRHDAWRLKNQ 1192 (1431)
T ss_pred EEEEcCCCeEEEEEccccccccceeeeeecccccCCCceEEeecccccccceeEEEEEeccceEEecchhhhhHHhhhcC
Confidence 6778999999999998632111 1122222333333334444333 33 78888888999999998877666553
Q ss_pred CCCCCeEEEEEe--CCEEEEEeCCCcEEEEECCCCceeEEEecCCCCceEEEEEEc---CCCCEEEEE-E-CCCcEEEEe
Q 008820 380 GHKSAVSTLAVC--NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLT---AVQHTLVVS-H-ESGSIKVWR 452 (552)
Q Consensus 380 ~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s---~~~~~l~~g-~-~dg~i~iwd 452 (552)
...+.|++++.+ .+.+++|...|.+.+||+|-+.++..+..+....+..+ +.. +.....+++ + ..+.|.+|+
T Consensus 1193 ~~hG~vTSi~idp~~~WlviGts~G~l~lWDLRF~~~i~sw~~P~~~~i~~v-~~~~~~~~~S~~vs~~~~~~nevs~wn 1271 (1431)
T KOG1240|consen 1193 LRHGLVTSIVIDPWCNWLVIGTSRGQLVLWDLRFRVPILSWEHPARAPIRHV-WLCPTYPQESVSVSAGSSSNNEVSTWN 1271 (1431)
T ss_pred ccccceeEEEecCCceEEEEecCCceEEEEEeecCceeecccCcccCCcceE-EeeccCCCCceEEEecccCCCceeeee
Confidence 345789999999 45999999999999999999999888877665555443 333 333444444 3 578899998
Q ss_pred CCcc--eeeeecc-------------------cc-eEEE-EEecCCEEEEEeCCCeEEEEecCC
Q 008820 453 NDKF--MKSMQTH-------------------KG-SVFA-VFLEGKWLFTGGWDKTVSVQELAG 493 (552)
Q Consensus 453 ~~~~--~~~~~~h-------------------~~-~v~~-v~~~~~~l~sgs~dg~i~iwd~~~ 493 (552)
..+. ...+-.. .- .+.+ +.--+..+.+|+.|..|+.||...
T Consensus 1272 ~~~g~~~~vl~~s~~~p~ls~~~Ps~~~~kp~~~~~~~~~~~~~~~~~ltggsd~kIR~wD~~~ 1335 (1431)
T KOG1240|consen 1272 METGLRQTVLWASDGAPILSYALPSNDARKPDSLAGISCGVCEKNGFLLTGGSDMKIRKWDPTR 1335 (1431)
T ss_pred cccCcceEEEEcCCCCcchhhhcccccCCCCCcccceeeecccCCceeeecCCccceeeccCCC
Confidence 5432 1121111 00 1111 112566889999999999999754
No 173
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.72 E-value=3.3e-18 Score=150.73 Aligned_cols=113 Identities=21% Similarity=0.373 Sum_probs=83.2
Q ss_pred hhhhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-C
Q 008820 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (552)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-p 88 (552)
-++|.| ||++.+..+.. |.++++|||-|||||.+. ...++.|||||||||+||||..=+ |
T Consensus 165 gvvKLGDfGL~r~l~s~~t--fA~S~VGTPyYMSPE~i~---------------~~~Y~~kSDiWslGCllyEMcaL~~P 227 (375)
T KOG0591|consen 165 GVVKLGDFGLGRFLSSKTT--FAHSLVGTPYYMSPERIH---------------ESGYNFKSDIWSLGCLLYEMCALQSP 227 (375)
T ss_pred CceeeccchhHhHhcchhH--HHHhhcCCCcccCHHHHh---------------cCCCCcchhHHHHHHHHHHHHhcCCC
Confidence 367888 89988887754 799999999999999992 356779999999999999999999 9
Q ss_pred chHHHhhhhh-hc-cccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHH
Q 008820 89 FTKELIDYIR-CV-STKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCI 162 (552)
Q Consensus 89 f~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l 162 (552)
|.+.+..+|- .+ +++ . +..|. .+.+..+.+++..|+..+|+.||........+
T Consensus 228 F~g~n~~~L~~KI~qgd-~-----------------~~~p~---~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di 282 (375)
T KOG0591|consen 228 FYGDNLLSLCKKIEQGD-Y-----------------PPLPD---EHYSTDLRELINMCIAVDPEQRPDTVPYVQDI 282 (375)
T ss_pred cccccHHHHHHHHHcCC-C-----------------CCCcH---HHhhhHHHHHHHHHccCCcccCCCcchHHHHH
Confidence 9998666441 00 010 0 00110 12334588999999999999999865444433
No 174
>COG2319 FOG: WD40 repeat [General function prediction only]
Probab=99.71 E-value=2.5e-13 Score=137.68 Aligned_cols=285 Identities=29% Similarity=0.455 Sum_probs=205.4
Q ss_pred eEEEEEeecCccceEEEEEc--CCEEEEEeC-CCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEE
Q 008820 242 NVKFKDLQGHRDCVTGLAVG--GGFLFSSSF-DKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIF 318 (552)
Q Consensus 242 ~~~~~~l~~H~~~V~~l~~s--~~~l~s~s~-dg~I~iwd~~~~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~ 318 (552)
......+.+|...|.+++|+ +..+++++. |+.+++|+..++..+..+.+|...|.+++|+|++..++++++.|+.|+
T Consensus 145 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~ 224 (466)
T COG2319 145 GKLIRTLEGHSESVTSLAFSPDGKLLASGSSLDGTIKLWDLRTGKPLSTLAGHTDPVSSLAFSPDGGLLIASGSSDGTIR 224 (466)
T ss_pred CeEEEEEecCcccEEEEEECCCCCEEEecCCCCCceEEEEcCCCceEEeeccCCCceEEEEEcCCcceEEEEecCCCcEE
Confidence 34556678899999999999 668888885 999999999998999999999999999999987765666669999999
Q ss_pred EEeCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCce-eEEecCCCCCeEEEEEeC--CEE
Q 008820 319 VWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTL-SCTMSGHKSAVSTLAVCN--GVL 395 (552)
Q Consensus 319 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~-~~~~~~h~~~v~~l~~~~--~~l 395 (552)
+||...+..... ....+.... +..+++++..+++++.|+.+++||...... ...+.+|...+.++.|.+ ..+
T Consensus 225 ~wd~~~~~~~~~--~~~~~~~~~---~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 299 (466)
T COG2319 225 LWDLSTGKLLRS--TLSGHSDSV---VSSFSPDGSLLASGSSDGTIRLWDLRSSSSLLRTLSGHSSSVLSVAFSPDGKLL 299 (466)
T ss_pred EEECCCCcEEee--ecCCCCcce---eEeECCCCCEEEEecCCCcEEEeeecCCCcEEEEEecCCccEEEEEECCCCCEE
Confidence 998773322221 222222211 227888888888999999999999986664 445567899999999984 477
Q ss_pred EEEeCCCcEEEEECCCCceeEEEe-cCCCCceEEEEEEcCCCCEEEEE-ECCCcEEEEeCCccee--eeecccceEEEEE
Q 008820 396 YSGSRDGTIRLWSLSDHSLLTVLE-EDSSGAVSSVLSLTAVQHTLVVS-HESGSIKVWRNDKFMK--SMQTHKGSVFAVF 471 (552)
Q Consensus 396 ~s~~~dg~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~s~~~~~l~~g-~~dg~i~iwd~~~~~~--~~~~h~~~v~~v~ 471 (552)
++++.|+.+++||..+........ ..+...+.. +.+.+++..++.+ ..|+.+.+|+...... ...... .+..+.
T Consensus 300 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 377 (466)
T COG2319 300 ASGSSDGTVRLWDLETGKLLSSLTLKGHEGPVSS-LSFSPDGSLLVSGGSDDGTIRLWDLRTGKPLKTLEGHS-NVLSVS 377 (466)
T ss_pred EEeeCCCcEEEEEcCCCceEEEeeecccCCceEE-EEECCCCCEEEEeecCCCcEEeeecCCCceeEEecCCc-eEEEEE
Confidence 779999999999998887766665 222333444 4554443556555 6789999999665432 222222 155555
Q ss_pred e-cCCEEEE-EeCCCeEEEEecCCCeeeeeeccCCCcccCcceEEEEEeC--CeEEEEeCCCeEEEEEecC
Q 008820 472 L-EGKWLFT-GGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQ--GKLFVGCADRTVKIALCNR 538 (552)
Q Consensus 472 ~-~~~~l~s-gs~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~~--~~l~s~s~Dg~v~iw~~~~ 538 (552)
+ ....+.. +..++.+.+|+.............. ..+....+.+ ..+++++.++.+++|+...
T Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 443 (466)
T COG2319 378 FSPDGRVVSSGSTDGTVRLWDLSTGSLLRNLDGHT-----SRVTSLDFSPDGKSLASGSSDNTIRLWDLKT 443 (466)
T ss_pred ECCCCCEEEEecCCCceEEEecccCeeeeeccCCC-----CcEEEEEECCCCcEEEEecCCCcEEEEeccC
Confidence 4 2233343 6889999999999876655444321 4567777764 3477789999999999875
No 175
>KOG2110 consensus Uncharacterized conserved protein, contains WD40 repeats [Function unknown]
Probab=99.71 E-value=7.9e-14 Score=127.04 Aligned_cols=282 Identities=14% Similarity=0.145 Sum_probs=189.1
Q ss_pred ceEEEEEcCCEEEEEeCCCc--EEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCccc
Q 008820 254 CVTGLAVGGGFLFSSSFDKS--IHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPL 331 (552)
Q Consensus 254 ~V~~l~~s~~~l~s~s~dg~--I~iwd~~~~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~ 331 (552)
.|-..-|+..++|..+.+.. +++.+++.+..+..+. ...+|.+|.++. ..|+++-.+ .|+|||+.+.+....+
T Consensus 48 ~IvEmLFSSSLvaiV~~~qpr~Lkv~~~Kk~~~ICe~~-fpt~IL~VrmNr---~RLvV~Lee-~IyIydI~~MklLhTI 122 (391)
T KOG2110|consen 48 SIVEMLFSSSLVAIVSIKQPRKLKVVHFKKKTTICEIF-FPTSILAVRMNR---KRLVVCLEE-SIYIYDIKDMKLLHTI 122 (391)
T ss_pred EEEEeecccceeEEEecCCCceEEEEEcccCceEEEEe-cCCceEEEEEcc---ceEEEEEcc-cEEEEecccceeehhh
Confidence 45566677888887776654 9999998888887765 557899999854 244444443 4999999987776666
Q ss_pred cccccCCCceeeeEEEEeeCCC--EEEEe--eCCCcEEEEECCCCceeEEecCCCCCeEEEEEe-CC-EEEEEeCCCc-E
Q 008820 332 KKWNEEKDWRYSGIHALTTSGR--YLYTG--SGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC-NG-VLYSGSRDGT-I 404 (552)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~--~l~sg--s~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~-~~-~l~s~~~dg~-i 404 (552)
.....+ ...+.+++++.. +++.- ...|.|.+||..+-+++..+..|.+++-+++|+ ++ +||++|..|+ |
T Consensus 123 ~t~~~n----~~gl~AlS~n~~n~ylAyp~s~t~GdV~l~d~~nl~~v~~I~aH~~~lAalafs~~G~llATASeKGTVI 198 (391)
T KOG2110|consen 123 ETTPPN----PKGLCALSPNNANCYLAYPGSTTSGDVVLFDTINLQPVNTINAHKGPLAALAFSPDGTLLATASEKGTVI 198 (391)
T ss_pred hccCCC----ccceEeeccCCCCceEEecCCCCCceEEEEEcccceeeeEEEecCCceeEEEECCCCCEEEEeccCceEE
Confidence 665332 234667777654 66653 346899999999999999999999999999999 44 9999999997 7
Q ss_pred EEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEECCCcEEEEeCCcceeeeecccceEEEEEecCCEEEEEeC--
Q 008820 405 RLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDKFMKSMQTHKGSVFAVFLEGKWLFTGGW-- 482 (552)
Q Consensus 405 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~~~~~~~~~h~~~v~~v~~~~~~l~sgs~-- 482 (552)
|++.+.+|+.+..|+..........++|++++.+|++.+..++|++|.+.+... .....+-..-.+-+...-....
T Consensus 199 RVf~v~~G~kl~eFRRG~~~~~IySL~Fs~ds~~L~~sS~TeTVHiFKL~~~~~--~~~~~p~~~~~~~~~~sk~~~syl 276 (391)
T KOG2110|consen 199 RVFSVPEGQKLYEFRRGTYPVSIYSLSFSPDSQFLAASSNTETVHIFKLEKVSN--NPPESPTAGTSWFGKVSKAATSYL 276 (391)
T ss_pred EEEEcCCccEeeeeeCCceeeEEEEEEECCCCCeEEEecCCCeEEEEEeccccc--CCCCCCCCCCcccchhhhhhhhhc
Confidence 899999999999998765544455589999999999999999999998765431 1111111111111111110000
Q ss_pred -CCeEEEEecCCCeeeeeeccCCCcccCcceEEEEE--eCCeEEEEeCCCeEEEEEecCC-cceeEEEeccc
Q 008820 483 -DKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLY--WQGKLFVGCADRTVKIALCNRQ-IPEIFSLLLHI 550 (552)
Q Consensus 483 -dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~--~~~~l~s~s~Dg~v~iw~~~~~-~~~~~~~~gh~ 550 (552)
.+.-.+||....--....... . ...+..+.- .+.++.+++.||.++.|.++.+ +.++.-+.-|.
T Consensus 277 ps~V~~~~~~~R~FAt~~l~~s-~---~~~~~~l~~~~~~~~v~vas~dG~~y~y~l~~~~gGec~lik~h~ 344 (391)
T KOG2110|consen 277 PSQVSSVLDQSRKFATAKLPES-G---RKNICSLSSIQKIPRVLVASYDGHLYSYRLPPKEGGECALIKRHF 344 (391)
T ss_pred chhhhhhhhhccceeEEEccCC-C---ccceEEeeccCCCCEEEEEEcCCeEEEEEcCCCCCceeEEEEeec
Confidence 112223555432111111111 0 112333332 2467999999999999999864 55666555554
No 176
>KOG2919 consensus Guanine nucleotide-binding protein [General function prediction only]
Probab=99.70 E-value=6.8e-15 Score=131.42 Aligned_cols=258 Identities=17% Similarity=0.190 Sum_probs=185.5
Q ss_pred cceeeecCcceEEEeeCCCeEEEEEeec----------------------CccceEEEEEc---------CCEEEEEeCC
Q 008820 223 DQARAAGGVKDLVNGLSKGNVKFKDLQG----------------------HRDCVTGLAVG---------GGFLFSSSFD 271 (552)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~----------------------H~~~V~~l~~s---------~~~l~s~s~d 271 (552)
.....++++.-+++...+....+|.+.. ..+.|...+|- ..++++.+.|
T Consensus 53 kgckWSPDGSciL~~sedn~l~~~nlP~dlys~~~~~~~~~~~~~~~r~~eg~tvydy~wYs~M~s~qP~t~l~a~ssr~ 132 (406)
T KOG2919|consen 53 KGCKWSPDGSCILSLSEDNCLNCWNLPFDLYSKKADGPLNFSKHLSYRYQEGETVYDYCWYSRMKSDQPSTNLFAVSSRD 132 (406)
T ss_pred ccceeCCCCceEEeecccCeeeEEecChhhcccCCCCccccccceeEEeccCCEEEEEEeeeccccCCCccceeeecccc
Confidence 3455667777777777777777777521 12344455542 5789999999
Q ss_pred CcEEEEeCCCCeEEEEEeC--CCC---CeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCcccc-ccccCCC--ceee
Q 008820 272 KSIHVWSLKDFSHVHTFKG--HDH---KVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLK-KWNEEKD--WRYS 343 (552)
Q Consensus 272 g~I~iwd~~~~~~~~~~~~--h~~---~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~-~~~~~~~--~~~~ 343 (552)
.-|++||.-+|+...++.+ |.+ ...+++|+|++..+ .++....|+++|+..+....... +....+. ....
T Consensus 133 ~PIh~wdaftG~lraSy~~ydh~de~taAhsL~Fs~DGeql--faGykrcirvFdt~RpGr~c~vy~t~~~~k~gq~gii 210 (406)
T KOG2919|consen 133 QPIHLWDAFTGKLRASYRAYDHQDEYTAAHSLQFSPDGEQL--FAGYKRCIRVFDTSRPGRDCPVYTTVTKGKFGQKGII 210 (406)
T ss_pred CceeeeeccccccccchhhhhhHHhhhhheeEEecCCCCeE--eecccceEEEeeccCCCCCCcchhhhhccccccccee
Confidence 9999999999999888765 433 45689999998855 35678999999995443332222 2211111 1233
Q ss_pred eEEEEeeCC-CEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe--CCEEEEEeC-CCcEEEEECCCC-ceeEEE
Q 008820 344 GIHALTTSG-RYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC--NGVLYSGSR-DGTIRLWSLSDH-SLLTVL 418 (552)
Q Consensus 344 ~~~~~~~~~-~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~-dg~i~iwd~~~~-~~~~~~ 418 (552)
+..+++|.. +.++.|+...++-||.-..+.++..+.+|.+.|+.+.|. ++.|++|+. |..|..||+|.. .++..+
T Consensus 211 sc~a~sP~~~~~~a~gsY~q~~giy~~~~~~pl~llggh~gGvThL~~~edGn~lfsGaRk~dkIl~WDiR~~~~pv~~L 290 (406)
T KOG2919|consen 211 SCFAFSPMDSKTLAVGSYGQRVGIYNDDGRRPLQLLGGHGGGVTHLQWCEDGNKLFSGARKDDKILCWDIRYSRDPVYAL 290 (406)
T ss_pred eeeeccCCCCcceeeecccceeeeEecCCCCceeeecccCCCeeeEEeccCcCeecccccCCCeEEEEeehhccchhhhh
Confidence 455667754 489999999999999988999999999999999999999 458888774 789999999874 456666
Q ss_pred ecCCC-CceEEEEEEcCCCCEEEEEECCCcEEEEeCCc---ceeeeecccceEEEEEecC--CEEEEEeC
Q 008820 419 EEDSS-GAVSSVLSLTAVQHTLVVSHESGSIKVWRNDK---FMKSMQTHKGSVFAVFLEG--KWLFTGGW 482 (552)
Q Consensus 419 ~~~~~-~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~~---~~~~~~~h~~~v~~v~~~~--~~l~sgs~ 482 (552)
..+.. ..........|++++|++|+.||.|++||+.+ ....+..|+..++.++++. ..+++++.
T Consensus 291 ~rhv~~TNQRI~FDld~~~~~LasG~tdG~V~vwdlk~~gn~~sv~~~~sd~vNgvslnP~mpilatssG 360 (406)
T KOG2919|consen 291 ERHVGDTNQRILFDLDPKGEILASGDTDGSVRVWDLKDLGNEVSVTGNYSDTVNGVSLNPIMPILATSSG 360 (406)
T ss_pred hhhccCccceEEEecCCCCceeeccCCCccEEEEecCCCCCcccccccccccccceecCcccceeeeccC
Confidence 55533 22222256789999999999999999999765 4667778888998888744 45555553
No 177
>KOG1587 consensus Cytoplasmic dynein intermediate chain [Cytoskeleton]
Probab=99.70 E-value=6.5e-15 Score=147.95 Aligned_cols=263 Identities=17% Similarity=0.206 Sum_probs=178.6
Q ss_pred CCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCC--CccccccccCCCceeeeEEEE
Q 008820 271 DKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLG--HEPLKKWNEEKDWRYSGIHAL 348 (552)
Q Consensus 271 dg~I~iwd~~~~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 348 (552)
++.+.||+++........-.-...|.++.|+|.+.++++.|+.+|.|.+||++.... ...+......+......+...
T Consensus 221 ~~~~~vW~~~~p~~Pe~~~~~~s~v~~~~f~p~~p~ll~gG~y~GqV~lWD~~~~~~~~~s~ls~~~~sh~~~v~~vvW~ 300 (555)
T KOG1587|consen 221 DGVLLVWSLKNPNTPELVLESPSEVTCLKFCPFDPNLLAGGCYNGQVVLWDLRKGSDTPPSGLSALEVSHSEPVTAVVWL 300 (555)
T ss_pred CceEEEEecCCCCCceEEEecCCceeEEEeccCCcceEEeeccCceEEEEEccCCCCCCCcccccccccCCcCeEEEEEe
Confidence 347999999876333333336688999999999999999999999999999997765 333333322222222222111
Q ss_pred -eeCCCEEEEeeCCCcEEEEECCCCceeE-E-----ec------CCCCCeEEEEEe---CCEEEEEeCCCcEEEEECCCC
Q 008820 349 -TTSGRYLYTGSGDRTIKAWSLLDGTLSC-T-----MS------GHKSAVSTLAVC---NGVLYSGSRDGTIRLWSLSDH 412 (552)
Q Consensus 349 -~~~~~~l~sgs~dg~i~iwd~~~~~~~~-~-----~~------~h~~~v~~l~~~---~~~l~s~~~dg~i~iwd~~~~ 412 (552)
+..+.-+++++.||.|..|+++.-.... . .. .....+++++|. ++.++.|+.+|.|.--+-...
T Consensus 301 ~~~~~~~f~s~ssDG~i~~W~~~~l~~P~e~~~~~~~~~~~~~~~~~~~~t~~~F~~~~p~~FiVGTe~G~v~~~~r~g~ 380 (555)
T KOG1587|consen 301 QNEHNTEFFSLSSDGSICSWDTDMLSLPVEGLLLESKKHKGQQSSKAVGATSLKFEPTDPNHFIVGTEEGKVYKGCRKGY 380 (555)
T ss_pred ccCCCCceEEEecCCcEeeeeccccccchhhcccccccccccccccccceeeEeeccCCCceEEEEcCCcEEEEEeccCC
Confidence 2223469999999999999987543211 1 11 122357888988 559999999999987443322
Q ss_pred cee--------EEEecCCCCceEEEEEEcCCCCEEEEEECCCcEEEEeCC---cceeeeecccceEEEEEe---cCCEEE
Q 008820 413 SLL--------TVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRND---KFMKSMQTHKGSVFAVFL---EGKWLF 478 (552)
Q Consensus 413 ~~~--------~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~---~~~~~~~~h~~~v~~v~~---~~~~l~ 478 (552)
+.. ..+.. +.+.+.. +.++|=+..++..+.|.+++||... .++..+..+...+++++| ....++
T Consensus 381 ~~~~~~~~~~~~~~~~-h~g~v~~-v~~nPF~~k~fls~gDW~vriWs~~~~~~Pl~~~~~~~~~v~~vaWSptrpavF~ 458 (555)
T KOG1587|consen 381 TPAPEVSYKGHSTFIT-HIGPVYA-VSRNPFYPKNFLSVGDWTVRIWSEDVIASPLLSLDSSPDYVTDVAWSPTRPAVFA 458 (555)
T ss_pred cccccccccccccccc-cCcceEe-eecCCCccceeeeeccceeEeccccCCCCcchhhhhccceeeeeEEcCcCceEEE
Confidence 211 12222 2455555 4777766666655569999999844 467777888888999998 566899
Q ss_pred EEeCCCeEEEEecCCCeeeeeeccCCCcccCcceEEEEEeC-Ce-EEEEeCCCeEEEEEecC
Q 008820 479 TGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQ-GK-LFVGCADRTVKIALCNR 538 (552)
Q Consensus 479 sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~~-~~-l~s~s~Dg~v~iw~~~~ 538 (552)
++..||.|.+||+............. +....+.+.|++ +. |++|...|++++|++..
T Consensus 459 ~~d~~G~l~iWDLl~~~~~Pv~s~~~---~~~~l~~~~~s~~g~~lavGd~~G~~~~~~l~~ 517 (555)
T KOG1587|consen 459 TVDGDGNLDIWDLLQDDEEPVLSQKV---CSPALTRVRWSPNGKLLAVGDANGTTHILKLSE 517 (555)
T ss_pred EEcCCCceehhhhhccccCCcccccc---cccccceeecCCCCcEEEEecCCCcEEEEEcCc
Confidence 99999999999997654433322211 144566777776 54 88899999999999963
No 178
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.69 E-value=1.4e-17 Score=162.41 Aligned_cols=109 Identities=19% Similarity=0.366 Sum_probs=83.7
Q ss_pred hhcc--ccccccccc-chhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cc
Q 008820 14 AKVG--CVGSRICDK-EVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QF 89 (552)
Q Consensus 14 ~~~~--~~~~~~~~~-~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf 89 (552)
-||| |||..++.. |. -.+++|||-|+|||++. +...+..+||||+|||||.||+|+ ||
T Consensus 157 VKIgDFGLAt~le~~~Er---k~TlCGTPNYIAPEVl~---------------k~gHsfEvDiWSlGcvmYtLL~G~PPF 218 (592)
T KOG0575|consen 157 VKIGDFGLATQLEYDGER---KKTLCGTPNYIAPEVLN---------------KSGHSFEVDIWSLGCVMYTLLVGRPPF 218 (592)
T ss_pred EEecccceeeeecCcccc---cceecCCCcccChhHhc---------------cCCCCCchhhhhhhhHHHhhhhCCCCc
Confidence 4777 999888855 55 57899999999999993 234458899999999999999999 99
Q ss_pred hHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHH
Q 008820 90 TKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKC 161 (552)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~ 161 (552)
+..++. +++..+.......|. ....+.+++|.++|+.+|.+||++.++...
T Consensus 219 etk~vk-----------------ety~~Ik~~~Y~~P~----~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h 269 (592)
T KOG0575|consen 219 ETKTVK-----------------ETYNKIKLNEYSMPS----HLSAEAKDLIRKLLRPNPSERPSLDEVLDH 269 (592)
T ss_pred ccchHH-----------------HHHHHHHhcCccccc----ccCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 987666 223333332222222 355679999999999999999999887664
No 179
>KOG1538 consensus Uncharacterized conserved protein WDR10, contains WD40 repeats [General function prediction only]
Probab=99.69 E-value=2.9e-15 Score=145.48 Aligned_cols=264 Identities=19% Similarity=0.246 Sum_probs=184.2
Q ss_pred ceEEEEEc--CCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCccc
Q 008820 254 CVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPL 331 (552)
Q Consensus 254 ~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~ 331 (552)
.|..++|. |..|+.+..| .+.+||.+.|..+.++++|.+.|++++|+.+|. .+++|+.|..|.+|+-.-... +
T Consensus 14 ci~d~afkPDGsqL~lAAg~-rlliyD~ndG~llqtLKgHKDtVycVAys~dGk-rFASG~aDK~VI~W~~klEG~---L 88 (1081)
T KOG1538|consen 14 CINDIAFKPDGTQLILAAGS-RLLVYDTSDGTLLQPLKGHKDTVYCVAYAKDGK-RFASGSADKSVIIWTSKLEGI---L 88 (1081)
T ss_pred chheeEECCCCceEEEecCC-EEEEEeCCCcccccccccccceEEEEEEccCCc-eeccCCCceeEEEecccccce---e
Confidence 78999998 7777776655 699999999999999999999999999999776 779999999999998542211 1
Q ss_pred cccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe-CC-EEEEEeCCCcEEEEEC
Q 008820 332 KKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC-NG-VLYSGSRDGTIRLWSL 409 (552)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~-~~-~l~s~~~dg~i~iwd~ 409 (552)
+ + .+. ....+..|+|-...+++++- ...-+|........+ .+ ....|.+.+|. ++ +++.|-.||+|.+-+-
T Consensus 89 k-Y--SH~-D~IQCMsFNP~~h~LasCsL-sdFglWS~~qK~V~K-~k-ss~R~~~CsWtnDGqylalG~~nGTIsiRNk 161 (1081)
T KOG1538|consen 89 K-Y--SHN-DAIQCMSFNPITHQLASCSL-SDFGLWSPEQKSVSK-HK-SSSRIICCSWTNDGQYLALGMFNGTISIRNK 161 (1081)
T ss_pred e-e--ccC-CeeeEeecCchHHHhhhcch-hhccccChhhhhHHh-hh-hheeEEEeeecCCCcEEEEeccCceEEeecC
Confidence 1 1 111 23345566777778999887 447789876543322 11 24457777887 44 9999999999999864
Q ss_pred CCCceeEEEec--CCCCceEEEEEEcCCC-----CEEEEEECCCcEEEEeCC-cceeeeecccceEEEEE--ecCCEEEE
Q 008820 410 SDHSLLTVLEE--DSSGAVSSVLSLTAVQ-----HTLVVSHESGSIKVWRND-KFMKSMQTHKGSVFAVF--LEGKWLFT 479 (552)
Q Consensus 410 ~~~~~~~~~~~--~~~~~~~~~~~~s~~~-----~~l~~g~~dg~i~iwd~~-~~~~~~~~h~~~v~~v~--~~~~~l~s 479 (552)
+++....+.. ....++.+ ++|+|.. ..+++.....++.+|.+. +.+..-+.-.-...|++ ++|.++..
T Consensus 162 -~gEek~~I~Rpgg~Nspiws-i~~~p~sg~G~~di~aV~DW~qTLSFy~LsG~~Igk~r~L~FdP~CisYf~NGEy~Li 239 (1081)
T KOG1538|consen 162 -NGEEKVKIERPGGSNSPIWS-ICWNPSSGEGRNDILAVADWGQTLSFYQLSGKQIGKDRALNFDPCCISYFTNGEYILL 239 (1081)
T ss_pred -CCCcceEEeCCCCCCCCceE-EEecCCCCCCccceEEEEeccceeEEEEecceeecccccCCCCchhheeccCCcEEEE
Confidence 4444433432 33455666 4777653 467777778888888743 33322222222223444 49999999
Q ss_pred EeCCCeEEEEecCCCeeeeeeccCCCcccCcceEEEEEeCC--eEEEEeCCCeEEEEEec
Q 008820 480 GGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQG--KLFVGCADRTVKIALCN 537 (552)
Q Consensus 480 gs~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~--~l~s~s~Dg~v~iw~~~ 537 (552)
|+.|+.+++|.-++-.+ .+... .+..|..++..|+ .++.|+.||+|-.|++-
T Consensus 240 GGsdk~L~~fTR~GvrL-GTvg~-----~D~WIWtV~~~PNsQ~v~~GCqDGTiACyNl~ 293 (1081)
T KOG1538|consen 240 GGSDKQLSLFTRDGVRL-GTVGE-----QDSWIWTVQAKPNSQYVVVGCQDGTIACYNLI 293 (1081)
T ss_pred ccCCCceEEEeecCeEE-eeccc-----cceeEEEEEEccCCceEEEEEccCeeehhhhH
Confidence 99999999997655433 22222 2778999999964 38899999999999874
No 180
>KOG2055 consensus WD40 repeat protein [General function prediction only]
Probab=99.68 E-value=1.2e-14 Score=135.66 Aligned_cols=268 Identities=13% Similarity=0.193 Sum_probs=196.4
Q ss_pred CCCCCccccceeeecCcceEEEeeCCCeEEEEEeecC-----------ccceEEEEEc--CC-EEEEEeCCCcEEEEeCC
Q 008820 215 ENSDGADIDQARAAGGVKDLVNGLSKGNVKFKDLQGH-----------RDCVTGLAVG--GG-FLFSSSFDKSIHVWSLK 280 (552)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~H-----------~~~V~~l~~s--~~-~l~s~s~dg~I~iwd~~ 280 (552)
..+....+.++.|.+.-..++++..++.++++.+.|. ..+|.+.+|. |. .+++++.....+.||+.
T Consensus 209 ~~ps~~~I~sv~FHp~~plllvaG~d~~lrifqvDGk~N~~lqS~~l~~fPi~~a~f~p~G~~~i~~s~rrky~ysyDle 288 (514)
T KOG2055|consen 209 AHPSHGGITSVQFHPTAPLLLVAGLDGTLRIFQVDGKVNPKLQSIHLEKFPIQKAEFAPNGHSVIFTSGRRKYLYSYDLE 288 (514)
T ss_pred CCcCcCCceEEEecCCCceEEEecCCCcEEEEEecCccChhheeeeeccCccceeeecCCCceEEEecccceEEEEeecc
Confidence 3445567899999999999999999999999998764 3578888888 66 89999999999999999
Q ss_pred CCeEEEE--EeCCC-CCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEE
Q 008820 281 DFSHVHT--FKGHD-HKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYT 357 (552)
Q Consensus 281 ~~~~~~~--~~~h~-~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s 357 (552)
+.+..+. +.++. ..+.....+++++ +++..+..|.|.+....++.....++.. ....-.+|+.+++.|++
T Consensus 289 ~ak~~k~~~~~g~e~~~~e~FeVShd~~-fia~~G~~G~I~lLhakT~eli~s~Kie------G~v~~~~fsSdsk~l~~ 361 (514)
T KOG2055|consen 289 TAKVTKLKPPYGVEEKSMERFEVSHDSN-FIAIAGNNGHIHLLHAKTKELITSFKIE------GVVSDFTFSSDSKELLA 361 (514)
T ss_pred ccccccccCCCCcccchhheeEecCCCC-eEEEcccCceEEeehhhhhhhhheeeec------cEEeeEEEecCCcEEEE
Confidence 8775432 33443 3566777788666 7889999999999987765544333321 12223467788888988
Q ss_pred eeCCCcEEEEECCCCceeEEecCCCCCe--EEEEEe--CCEEEEEeCCCcEEEEECCC------CceeEEEecCCCCceE
Q 008820 358 GSGDRTIKAWSLLDGTLSCTMSGHKSAV--STLAVC--NGVLYSGSRDGTIRLWSLSD------HSLLTVLEEDSSGAVS 427 (552)
Q Consensus 358 gs~dg~i~iwd~~~~~~~~~~~~h~~~v--~~l~~~--~~~l~s~~~dg~i~iwd~~~------~~~~~~~~~~~~~~~~ 427 (552)
.+.+|.|.+||+++..+++.+.. .+.| ++++.+ +.+|++|+..|.|.|||..+ .+++..+..-. ..+.
T Consensus 362 ~~~~GeV~v~nl~~~~~~~rf~D-~G~v~gts~~~S~ng~ylA~GS~~GiVNIYd~~s~~~s~~PkPik~~dNLt-t~It 439 (514)
T KOG2055|consen 362 SGGTGEVYVWNLRQNSCLHRFVD-DGSVHGTSLCISLNGSYLATGSDSGIVNIYDGNSCFASTNPKPIKTVDNLT-TAIT 439 (514)
T ss_pred EcCCceEEEEecCCcceEEEEee-cCccceeeeeecCCCceEEeccCcceEEEeccchhhccCCCCchhhhhhhh-eeee
Confidence 88999999999999999988863 2333 345544 55999999999999999653 34444443321 2233
Q ss_pred EEEEEcCCCCEEEEEEC--CCcEEEEeCCcc--eeee---ecccceEEEEEe--cCCEEEEEeCCCeEEEEecC
Q 008820 428 SVLSLTAVQHTLVVSHE--SGSIKVWRNDKF--MKSM---QTHKGSVFAVFL--EGKWLFTGGWDKTVSVQELA 492 (552)
Q Consensus 428 ~~~~~s~~~~~l~~g~~--dg~i~iwd~~~~--~~~~---~~h~~~v~~v~~--~~~~l~sgs~dg~i~iwd~~ 492 (552)
. +.|+++..+|+.++. +..+++-.+..+ ...+ ...-+.|+|++| .+.+|+.|..+|.+.+|.+.
T Consensus 440 s-l~Fn~d~qiLAiaS~~~knalrLVHvPS~TVFsNfP~~n~~vg~vtc~aFSP~sG~lAvGNe~grv~l~kL~ 512 (514)
T KOG2055|consen 440 S-LQFNHDAQILAIASRVKKNALRLVHVPSCTVFSNFPTSNTKVGHVTCMAFSPNSGYLAVGNEAGRVHLFKLH 512 (514)
T ss_pred e-eeeCcchhhhhhhhhccccceEEEeccceeeeccCCCCCCcccceEEEEecCCCceEEeecCCCceeeEeec
Confidence 3 799999999988875 567888765432 2222 223346677776 89999999999999999874
No 181
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=99.68 E-value=1.5e-17 Score=153.06 Aligned_cols=99 Identities=17% Similarity=0.176 Sum_probs=75.1
Q ss_pred cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhhh
Q 008820 18 CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDY 96 (552)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~~ 96 (552)
||+|.-+..+.. .++|+|||.|||||++ ....++..+|.||||++|||||+|. ||.+.+...
T Consensus 170 gL~k~~~~~~~~--t~tfcGT~eYmAPEil---------------~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~ 232 (357)
T KOG0598|consen 170 GLCKEDLKDGDA--TRTFCGTPEYMAPEIL---------------LGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKK 232 (357)
T ss_pred ccchhcccCCCc--cccccCCccccChHHH---------------hcCCCCcccchHhHHHHHHHHhhCCCCCcCccHHH
Confidence 888855555443 7889999999999999 2356779999999999999999999 999877662
Q ss_pred hhhccccCCCchhhhhhhhHHHHHHHHHHH-hhhhcCccccHHHHHHhhcccCCCCCcc
Q 008820 97 IRCVSTKASDDNIACLGMYMAWMEKVTYLL-ENKFGSEFVSLQLMFCQCLNFDPGCRPL 154 (552)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~l~~~p~~R~~ 154 (552)
+ .+++.... .........+..+++.++|..+|.+|-.
T Consensus 233 ~---------------------~~~I~~~k~~~~p~~ls~~ardll~~LL~rdp~~RLg 270 (357)
T KOG0598|consen 233 M---------------------YDKILKGKLPLPPGYLSEEARDLLKKLLKRDPRQRLG 270 (357)
T ss_pred H---------------------HHHHhcCcCCCCCccCCHHHHHHHHHHhccCHHHhcC
Confidence 2 22222222 2223335667999999999999999964
No 182
>KOG1538 consensus Uncharacterized conserved protein WDR10, contains WD40 repeats [General function prediction only]
Probab=99.67 E-value=6.8e-15 Score=142.98 Aligned_cols=244 Identities=17% Similarity=0.217 Sum_probs=176.4
Q ss_pred EEEeeCCCeEEEEEeecCccceEEEEEc--CCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCCEEEEE
Q 008820 234 LVNGLSKGNVKFKDLQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISG 311 (552)
Q Consensus 234 ~~~~~~~~~~~~~~l~~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~ 311 (552)
++....+.+..+.+++||.+.|.|++|+ |+.++||+.|..|.+|+-+-...++ ..|.+.|.|+.|+|-.. .+++|
T Consensus 35 lliyD~ndG~llqtLKgHKDtVycVAys~dGkrFASG~aDK~VI~W~~klEG~Lk--YSH~D~IQCMsFNP~~h-~LasC 111 (1081)
T KOG1538|consen 35 LLVYDTSDGTLLQPLKGHKDTVYCVAYAKDGKRFASGSADKSVIIWTSKLEGILK--YSHNDAIQCMSFNPITH-QLASC 111 (1081)
T ss_pred EEEEeCCCcccccccccccceEEEEEEccCCceeccCCCceeEEEecccccceee--eccCCeeeEeecCchHH-Hhhhc
Confidence 3333444445688999999999999999 9999999999999999854322222 25999999999999655 55666
Q ss_pred cCCCcEEEEeCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCceeEEe---cCCCCCeEEE
Q 008820 312 DSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTM---SGHKSAVSTL 388 (552)
Q Consensus 312 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~---~~h~~~v~~l 388 (552)
+- ...-+|..+... + ..++.......+++..||++++.|-.||+|.+-+. +++....+ .+..++|.++
T Consensus 112 sL-sdFglWS~~qK~----V---~K~kss~R~~~CsWtnDGqylalG~~nGTIsiRNk-~gEek~~I~Rpgg~Nspiwsi 182 (1081)
T KOG1538|consen 112 SL-SDFGLWSPEQKS----V---SKHKSSSRIICCSWTNDGQYLALGMFNGTISIRNK-NGEEKVKIERPGGSNSPIWSI 182 (1081)
T ss_pred ch-hhccccChhhhh----H---HhhhhheeEEEeeecCCCcEEEEeccCceEEeecC-CCCcceEEeCCCCCCCCceEE
Confidence 54 335567654321 1 11122233345577788999999999999999874 45544444 3477899999
Q ss_pred EEe-------CCEEEEEeCCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEECCCcEEEEeCC-cceeee
Q 008820 389 AVC-------NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRND-KFMKSM 460 (552)
Q Consensus 389 ~~~-------~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~-~~~~~~ 460 (552)
+|+ ++.+++.....++.++.+. |+.+..-+. -+.-..++.+-++|.++..|+.|+.+.+|.-. -.+.++
T Consensus 183 ~~~p~sg~G~~di~aV~DW~qTLSFy~Ls-G~~Igk~r~--L~FdP~CisYf~NGEy~LiGGsdk~L~~fTR~GvrLGTv 259 (1081)
T KOG1538|consen 183 CWNPSSGEGRNDILAVADWGQTLSFYQLS-GKQIGKDRA--LNFDPCCISYFTNGEYILLGGSDKQLSLFTRDGVRLGTV 259 (1081)
T ss_pred EecCCCCCCccceEEEEeccceeEEEEec-ceeeccccc--CCCCchhheeccCCcEEEEccCCCceEEEeecCeEEeec
Confidence 998 2378889999999999875 443332211 12223447888999999999999999999633 344555
Q ss_pred ecccceEEEEE--ecCCEEEEEeCCCeEEEEecC
Q 008820 461 QTHKGSVFAVF--LEGKWLFTGGWDKTVSVQELA 492 (552)
Q Consensus 461 ~~h~~~v~~v~--~~~~~l~sgs~dg~i~iwd~~ 492 (552)
.....+|+++. |++++++.|+.||+|..|++.
T Consensus 260 g~~D~WIWtV~~~PNsQ~v~~GCqDGTiACyNl~ 293 (1081)
T KOG1538|consen 260 GEQDSWIWTVQAKPNSQYVVVGCQDGTIACYNLI 293 (1081)
T ss_pred cccceeEEEEEEccCCceEEEEEccCeeehhhhH
Confidence 55677888776 599999999999999999874
No 183
>KOG1445 consensus Tumor-specific antigen (contains WD repeats) [Cytoskeleton]
Probab=99.67 E-value=1.4e-15 Score=146.96 Aligned_cols=232 Identities=18% Similarity=0.262 Sum_probs=158.1
Q ss_pred EcCCCcEEEEeCCCCCCCcc--ccccccCCCceeeeEEEEee---CCCEEEEeeCCCcEEEEECCCC-------ceeEEe
Q 008820 311 GDSGGGIFVWSFSFPLGHEP--LKKWNEEKDWRYSGIHALTT---SGRYLYTGSGDRTIKAWSLLDG-------TLSCTM 378 (552)
Q Consensus 311 ~~~dg~i~vwd~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~---~~~~l~sgs~dg~i~iwd~~~~-------~~~~~~ 378 (552)
++..|.|-|++++.+..... +..+. ....+..+.+ |...|++++.||.|++|.+..+ .+...+
T Consensus 599 ~g~gG~iai~el~~PGrLPDgv~p~l~-----Ngt~vtDl~WdPFD~~rLAVa~ddg~i~lWr~~a~gl~e~~~tPe~~l 673 (1012)
T KOG1445|consen 599 AGSGGVIAIYELNEPGRLPDGVMPGLF-----NGTLVTDLHWDPFDDERLAVATDDGQINLWRLTANGLPENEMTPEKIL 673 (1012)
T ss_pred cCCCceEEEEEcCCCCCCCcccccccc-----cCceeeecccCCCChHHeeecccCceEEEEEeccCCCCcccCCcceee
Confidence 45579999999986543221 11111 1223444544 4569999999999999998644 455677
Q ss_pred cCCCCCeEEEEEe---CCEEEEEeCCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEECCCcEEEEeCCc
Q 008820 379 SGHKSAVSTLAVC---NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDK 455 (552)
Q Consensus 379 ~~h~~~v~~l~~~---~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~~ 455 (552)
..|...|+++.|+ .+.|++++.|.+|++||+++++....+.+|. +.+.. ++|+|+|+.+++.+.||+|++|+.++
T Consensus 674 t~h~eKI~slRfHPLAadvLa~asyd~Ti~lWDl~~~~~~~~l~gHt-dqIf~-~AWSpdGr~~AtVcKDg~~rVy~Prs 751 (1012)
T KOG1445|consen 674 TIHGEKITSLRFHPLAADVLAVASYDSTIELWDLANAKLYSRLVGHT-DQIFG-IAWSPDGRRIATVCKDGTLRVYEPRS 751 (1012)
T ss_pred ecccceEEEEEecchhhhHhhhhhccceeeeeehhhhhhhheeccCc-CceeE-EEECCCCcceeeeecCceEEEeCCCC
Confidence 8899999999999 5699999999999999999999998998875 44555 69999999999999999999999765
Q ss_pred ceeeeecccceE----EEEEe--cCCEEEEEeCCC----eEEEEecCCCeeeeeeccCCCcccCcceEEEEEeCCe-EEE
Q 008820 456 FMKSMQTHKGSV----FAVFL--EGKWLFTGGWDK----TVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQGK-LFV 524 (552)
Q Consensus 456 ~~~~~~~h~~~v----~~v~~--~~~~l~sgs~dg----~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~-l~s 524 (552)
..+.+....+++ ..+.| +|+++++.+.|. .|.+||..+-.........-.+....-|..-.+..+. +++
T Consensus 752 ~e~pv~Eg~gpvgtRgARi~wacdgr~viv~Gfdk~SeRQv~~Y~Aq~l~~~pl~t~~lDvaps~LvP~YD~Ds~~lflt 831 (1012)
T KOG1445|consen 752 REQPVYEGKGPVGTRGARILWACDGRIVIVVGFDKSSERQVQMYDAQTLDLRPLYTQVLDVAPSPLVPHYDYDSNVLFLT 831 (1012)
T ss_pred CCCccccCCCCccCcceeEEEEecCcEEEEecccccchhhhhhhhhhhccCCcceeeeecccCccccccccCCCceEEEe
Confidence 444333222222 22334 999999888764 5788887653322211111111111112222222233 888
Q ss_pred EeCCCeEEEEEecCCcceeEEEecc
Q 008820 525 GCADRTVKIALCNRQIPEIFSLLLH 549 (552)
Q Consensus 525 ~s~Dg~v~iw~~~~~~~~~~~~~gh 549 (552)
|-.|..|++|.+-...+-+..+..|
T Consensus 832 GKGD~~v~~yEv~~esPy~lpl~~f 856 (1012)
T KOG1445|consen 832 GKGDRFVNMYEVIYESPYLLPLAPF 856 (1012)
T ss_pred cCCCceEEEEEecCCCceeeecccc
Confidence 9999999999997666655555444
No 184
>KOG1188 consensus WD40 repeat protein [General function prediction only]
Probab=99.66 E-value=5e-15 Score=133.33 Aligned_cols=186 Identities=17% Similarity=0.241 Sum_probs=145.0
Q ss_pred CEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe----CCEEEEEeCCCcEEEEECCCCceeEEEecCC-CCceE
Q 008820 353 RYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC----NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDS-SGAVS 427 (552)
Q Consensus 353 ~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~----~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~~~~~ 427 (552)
+.++++-..|+|++||..+++.+..++++...++.+.|. +..+.+|+.||+|++||+|.......+.... ++...
T Consensus 41 ~~vav~lSngsv~lyd~~tg~~l~~fk~~~~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~e~a~~~~~~~~~~~f 120 (376)
T KOG1188|consen 41 TAVAVSLSNGSVRLYDKGTGQLLEEFKGPPATTNGVRFISCDSPHGVISCSSDGTVRLWDIRSQAESARISWTQQSGTPF 120 (376)
T ss_pred eeEEEEecCCeEEEEeccchhhhheecCCCCcccceEEecCCCCCeeEEeccCCeEEEEEeecchhhhheeccCCCCCcc
Confidence 468888889999999999999999999999999999998 2489999999999999999877655554332 22333
Q ss_pred EEEEEcCCCCEEEEEEC----CCcEEEEeCCccee----eeecccceEEEEEe---cCCEEEEEeCCCeEEEEecCCCee
Q 008820 428 SVLSLTAVQHTLVVSHE----SGSIKVWRNDKFMK----SMQTHKGSVFAVFL---EGKWLFTGGWDKTVSVQELAGDEF 496 (552)
Q Consensus 428 ~~~~~s~~~~~l~~g~~----dg~i~iwd~~~~~~----~~~~h~~~v~~v~~---~~~~l~sgs~dg~i~iwd~~~~~~ 496 (552)
.+++....++.+++|.. +-.|.+||.++..+ -...|...|+++.| +.+.|++||.||.|.+||+.....
T Consensus 121 ~~ld~nck~~ii~~GtE~~~s~A~v~lwDvR~~qq~l~~~~eSH~DDVT~lrFHP~~pnlLlSGSvDGLvnlfD~~~d~E 200 (376)
T KOG1188|consen 121 ICLDLNCKKNIIACGTELTRSDASVVLWDVRSEQQLLRQLNESHNDDVTQLRFHPSDPNLLLSGSVDGLVNLFDTKKDNE 200 (376)
T ss_pred eEeeccCcCCeEEeccccccCceEEEEEEeccccchhhhhhhhccCcceeEEecCCCCCeEEeecccceEEeeecCCCcc
Confidence 33455557788888764 67899999875433 33579999999988 889999999999999999986533
Q ss_pred eeeeccCCCcccCcceEEEEEe-CC--eEEEEeCCCeEEEEEecCCc
Q 008820 497 EEDVIPTGAIPCGSVITALLYW-QG--KLFVGCADRTVKIALCNRQI 540 (552)
Q Consensus 497 ~~~~~~~~~~~~~~~v~~l~~~-~~--~l~s~s~Dg~v~iw~~~~~~ 540 (552)
.-.+.+ .+.+.+.|..+.|. ++ ++.+-+.++...+|+++...
T Consensus 201 eDaL~~--viN~~sSI~~igw~~~~ykrI~clTH~Etf~~~ele~~~ 245 (376)
T KOG1188|consen 201 EDALLH--VINHGSSIHLIGWLSKKYKRIMCLTHMETFAIYELEDGS 245 (376)
T ss_pred hhhHHH--hhcccceeeeeeeecCCcceEEEEEccCceeEEEccCCC
Confidence 222221 23346669999998 55 69999999999999998544
No 185
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=99.66 E-value=1.7e-17 Score=153.88 Aligned_cols=117 Identities=18% Similarity=0.254 Sum_probs=78.9
Q ss_pred hhhhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-C
Q 008820 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (552)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-p 88 (552)
-+-|++ |+||..... -||.+++|||+|.|||++..+ | ...+..+.|+|||||+||-+|+|. |
T Consensus 316 ~llKItDFGlAK~~g~~---sfm~TlCGTpsYvAPEVl~~k----g--------~~~~~~kVDiWSlGcvLfvcLsG~pP 380 (475)
T KOG0615|consen 316 CLLKITDFGLAKVSGEG---SFMKTLCGTPSYVAPEVLASK----G--------VEYYPSKVDIWSLGCVLFVCLSGYPP 380 (475)
T ss_pred eEEEecccchhhccccc---eehhhhcCCccccChhheecC----C--------eecccchheeeeccceEEEEeccCCC
Confidence 345677 888877633 379999999999999999221 1 112224899999999999999999 9
Q ss_pred chHHHhhh-hhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 89 FTKELIDY-IRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 89 f~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
|..+.... +. ..+.......-...+.....+..++|.++|..+|+.||+..++.+
T Consensus 381 FS~~~~~~sl~-----------------eQI~~G~y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~ 436 (475)
T KOG0615|consen 381 FSEEYTDPSLK-----------------EQILKGRYAFGPLQWDRISEEALDLINWMLVVDPENRPSADEALN 436 (475)
T ss_pred cccccCCccHH-----------------HHHhcCcccccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhc
Confidence 97654331 21 011111111111223333445779999999999999999887655
No 186
>KOG0642 consensus Cell-cycle nuclear protein, contains WD-40 repeats [Cell cycle control, cell division, chromosome partitioning]
Probab=99.66 E-value=1.8e-15 Score=144.69 Aligned_cols=255 Identities=20% Similarity=0.293 Sum_probs=170.0
Q ss_pred EEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCC-----CCCCccccccccCCCceeeeEEEEeeCCCEEEEeeC
Q 008820 286 HTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSF-----PLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSG 360 (552)
Q Consensus 286 ~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~ 360 (552)
.++..|.+.|..++|.|. ...+++++.||++++|+++. .....++.++..|..... +.++..++.++++|+.
T Consensus 288 ~tl~s~~d~ir~l~~~~s-ep~lit~sed~~lk~WnLqk~~~s~~~~~epi~tfraH~gPVl--~v~v~~n~~~~ysgg~ 364 (577)
T KOG0642|consen 288 FTLRSHDDCIRALAFHPS-EPVLITASEDGTLKLWNLQKAKKSAEKDVEPILTFRAHEGPVL--CVVVPSNGEHCYSGGI 364 (577)
T ss_pred eeeecchhhhhhhhcCCC-CCeEEEeccccchhhhhhcccCCccccceeeeEEEecccCceE--EEEecCCceEEEeecc
Confidence 356678899999999774 45789999999999999942 223345566666654322 2456778889999999
Q ss_pred CCcEEEEECCCC----------ceeEEecCCCCCeEEEEEe--CCEEEEEeCCCcEEEEECCCCceeEEEecCCCCceEE
Q 008820 361 DRTIKAWSLLDG----------TLSCTMSGHKSAVSTLAVC--NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSS 428 (552)
Q Consensus 361 dg~i~iwd~~~~----------~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~ 428 (552)
||+|+.|++... .....+.||.+.|+.++++ ...|++++.||+++.|+.....+ .++..........
T Consensus 365 Dg~I~~w~~p~n~dp~ds~dp~vl~~~l~Ghtdavw~l~~s~~~~~Llscs~DgTvr~w~~~~~~~-~~f~~~~e~g~Pl 443 (577)
T KOG0642|consen 365 DGTIRCWNLPPNQDPDDSYDPSVLSGTLLGHTDAVWLLALSSTKDRLLSCSSDGTVRLWEPTEESP-CTFGEPKEHGYPL 443 (577)
T ss_pred CceeeeeccCCCCCcccccCcchhccceeccccceeeeeecccccceeeecCCceEEeeccCCcCc-cccCCccccCCcc
Confidence 999999965411 2334678999999999999 55899999999999999876665 4444333333333
Q ss_pred EEEEcCCC-CEEEEEECCCcEEEEeCC--cceeeeecc-------cceEEEEE--ecCCEEEEEeCCCeEEEEecCCCee
Q 008820 429 VLSLTAVQ-HTLVVSHESGSIKVWRND--KFMKSMQTH-------KGSVFAVF--LEGKWLFTGGWDKTVSVQELAGDEF 496 (552)
Q Consensus 429 ~~~~s~~~-~~l~~g~~dg~i~iwd~~--~~~~~~~~h-------~~~v~~v~--~~~~~l~sgs~dg~i~iwd~~~~~~ 496 (552)
.+.+-... .+.++...-+.-.+++.. .....+... ...+..+. +.....+++..|+.|+++|..++..
T Consensus 444 svd~~ss~~a~~~~s~~~~~~~~~~~ev~s~~~~~~s~~~~~~~~~~~in~vVs~~~~~~~~~~hed~~Ir~~dn~~~~~ 523 (577)
T KOG0642|consen 444 SVDRTSSRPAHSLASFRFGYTSIDDMEVVSDLLIFESSASPGPRRYPQINKVVSHPTADITFTAHEDRSIRFFDNKTGKI 523 (577)
T ss_pred eEeeccchhHhhhhhcccccccchhhhhhhheeeccccCCCcccccCccceEEecCCCCeeEecccCCceeccccccccc
Confidence 23333222 222222222222223321 222222211 11223332 3778999999999999999998876
Q ss_pred eeeeccCCCcccCcceEEEEEeCC--eEEEEeCCCeEEEEEecCCcceeEEEeccc
Q 008820 497 EEDVIPTGAIPCGSVITALLYWQG--KLFVGCADRTVKIALCNRQIPEIFSLLLHI 550 (552)
Q Consensus 497 ~~~~~~~~~~~~~~~v~~l~~~~~--~l~s~s~Dg~v~iw~~~~~~~~~~~~~gh~ 550 (552)
...... +...++++++.++ .|++++.||.+++|+++ ....+.....|+
T Consensus 524 l~s~~a-----~~~svtslai~~ng~~l~s~s~d~sv~l~kld-~k~~~~es~~~r 573 (577)
T KOG0642|consen 524 LHSMVA-----HKDSVTSLAIDPNGPYLMSGSHDGSVRLWKLD-VKTCVLESTAHR 573 (577)
T ss_pred chheee-----ccceecceeecCCCceEEeecCCceeehhhcc-chheeecccccc
Confidence 554433 3667899999864 49999999999999997 344555555554
No 187
>KOG4227 consensus WD40 repeat protein [General function prediction only]
Probab=99.65 E-value=9.5e-15 Score=133.47 Aligned_cols=248 Identities=12% Similarity=0.127 Sum_probs=172.4
Q ss_pred EEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCC---CCccccccccCCCceeeeEEEEee--CCCEEEEeeC
Q 008820 286 HTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPL---GHEPLKKWNEEKDWRYSGIHALTT--SGRYLYTGSG 360 (552)
Q Consensus 286 ~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~sgs~ 360 (552)
+.+.+|.+.|+++.|+.+ ..+|++|+.|..+++|+++..- ..+++.....+ +...+.++.+ .+..+++|..
T Consensus 50 KD~~~H~GCiNAlqFS~N-~~~L~SGGDD~~~~~W~~de~~~~k~~KPI~~~~~~---H~SNIF~L~F~~~N~~~~SG~~ 125 (609)
T KOG4227|consen 50 KDVREHTGCINALQFSHN-DRFLASGGDDMHGRVWNVDELMVRKTPKPIGVMEHP---HRSNIFSLEFDLENRFLYSGER 125 (609)
T ss_pred hhhhhhccccceeeeccC-CeEEeecCCcceeeeechHHHHhhcCCCCceeccCc---cccceEEEEEccCCeeEecCCC
Confidence 445689999999999986 5688999999999999987432 22333333222 3334555544 4569999999
Q ss_pred CCcEEEEECCCCceeEEecC--CCCCeEEEEEe--CCEEEEEeCCCcEEEEECCCCc-eeEEEe-cCCCCceEEEEEEcC
Q 008820 361 DRTIKAWSLLDGTLSCTMSG--HKSAVSTLAVC--NGVLYSGSRDGTIRLWSLSDHS-LLTVLE-EDSSGAVSSVLSLTA 434 (552)
Q Consensus 361 dg~i~iwd~~~~~~~~~~~~--h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~-~~~~~~-~~~~~~~~~~~~~s~ 434 (552)
+++|...|+++.+.+..+.. ..+.|+.+..+ ++.+++.+.++.|.+||.+... ....+. ........+ ..|.|
T Consensus 126 ~~~VI~HDiEt~qsi~V~~~~~~~~~VY~m~~~P~DN~~~~~t~~~~V~~~D~Rd~~~~~~~~~~AN~~~~F~t-~~F~P 204 (609)
T KOG4227|consen 126 WGTVIKHDIETKQSIYVANENNNRGDVYHMDQHPTDNTLIVVTRAKLVSFIDNRDRQNPISLVLPANSGKNFYT-AEFHP 204 (609)
T ss_pred cceeEeeecccceeeeeecccCcccceeecccCCCCceEEEEecCceEEEEeccCCCCCCceeeecCCCcccee-eeecC
Confidence 99999999999998887752 33589999888 7899999999999999998765 332222 222233344 46666
Q ss_pred C-CCEEEEEECCCcEEEEeCCcceeeee------cc---cceEEEEEe--cCCEEEEEeCCCeEEEEecCCCeeeee-ec
Q 008820 435 V-QHTLVVSHESGSIKVWRNDKFMKSMQ------TH---KGSVFAVFL--EGKWLFTGGWDKTVSVQELAGDEFEED-VI 501 (552)
Q Consensus 435 ~-~~~l~~g~~dg~i~iwd~~~~~~~~~------~h---~~~v~~v~~--~~~~l~sgs~dg~i~iwd~~~~~~~~~-~~ 501 (552)
. ..+|++.+..+-+-+||.+.+...+. +- ...-+++.| +|..+.+--....-.+||+.+.++... ..
T Consensus 205 ~~P~Li~~~~~~~G~~~~D~R~~~~~~~~~~~~~~L~~~~~~~M~~~~~~~G~Q~msiRR~~~P~~~D~~S~R~~V~k~D 284 (609)
T KOG4227|consen 205 ETPALILVNSETGGPNVFDRRMQARPVYQRSMFKGLPQENTEWMGSLWSPSGNQFMSIRRGKCPLYFDFISQRCFVLKSD 284 (609)
T ss_pred CCceeEEeccccCCCCceeeccccchHHhhhccccCcccchhhhheeeCCCCCeehhhhccCCCEEeeeecccceeEecc
Confidence 4 56888899999999999775433221 11 111233334 788887776666667888877544332 22
Q ss_pred cCC-CcccCcceEEEEEeCCe-EEEEeCCCeEEEEEecC
Q 008820 502 PTG-AIPCGSVITALLYWQGK-LFVGCADRTVKIALCNR 538 (552)
Q Consensus 502 ~~~-~~~~~~~v~~l~~~~~~-l~s~s~Dg~v~iw~~~~ 538 (552)
+.. .......+.+++|-+++ +++|+.+=.|++|.+..
T Consensus 285 ~N~~GY~N~~T~KS~~F~~D~~v~tGSD~~~i~~WklP~ 323 (609)
T KOG4227|consen 285 HNPNGYCNIKTIKSMTFIDDYTVATGSDHWGIHIWKLPR 323 (609)
T ss_pred CCCCcceeeeeeeeeeeecceeeeccCcccceEEEecCC
Confidence 221 22234557788888766 99999999999999873
No 188
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=99.65 E-value=6.7e-17 Score=148.76 Aligned_cols=109 Identities=20% Similarity=0.345 Sum_probs=80.2
Q ss_pred cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhhh
Q 008820 18 CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDY 96 (552)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~~ 96 (552)
|+|+.+.++ ...+++||-+|||||.+ .| ..++.++||||||.+|+|+.+|+ ||.......
T Consensus 224 GVS~~lvnS----~a~tfvGT~~YMsPERi------~g---------~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~ 284 (364)
T KOG0581|consen 224 GVSGILVNS----IANTFVGTSAYMSPERI------SG---------ESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPY 284 (364)
T ss_pred cccHHhhhh----hcccccccccccChhhh------cC---------CcCCcccceecccHHHHHHhhCCCCCCCcCCCC
Confidence 778777777 46899999999999999 44 67788999999999999999999 998752211
Q ss_pred hhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhc--CccccHHHHHHhhcccCCCCCcchhhHHHH
Q 008820 97 IRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFG--SEFVSLQLMFCQCLNFDPGCRPLLTNVWKC 161 (552)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~ 161 (552)
+ ....+...+..-+.+..+ ...+++++++..||+++|.+||+..++.+.
T Consensus 285 ~----------------~~~~Ll~~Iv~~ppP~lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~H 335 (364)
T KOG0581|consen 285 L----------------DIFELLCAIVDEPPPRLPEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQH 335 (364)
T ss_pred C----------------CHHHHHHHHhcCCCCCCCcccCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 1 011222333222222222 356679999999999999999998876653
No 189
>KOG0644 consensus Uncharacterized conserved protein, contains WD40 repeat and BROMO domains [General function prediction only]
Probab=99.65 E-value=8e-16 Score=153.02 Aligned_cols=227 Identities=22% Similarity=0.307 Sum_probs=174.2
Q ss_pred cccceeeecCcceEEEeeCCCeEEEEE---------eecCccceEEEEEc--CCEEEEEeCCCcEEEEeCCCCeEEEEEe
Q 008820 221 DIDQARAAGGVKDLVNGLSKGNVKFKD---------LQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFK 289 (552)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---------l~~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~~~~~~~~ 289 (552)
.+-++.+...+.+++++..+..+++|. ..||.+.|+.++.+ .-+++++|.|..|++|.+.++.++..+.
T Consensus 192 aVyca~fDrtg~~Iitgsdd~lvKiwS~et~~~lAs~rGhs~ditdlavs~~n~~iaaaS~D~vIrvWrl~~~~pvsvLr 271 (1113)
T KOG0644|consen 192 AVYCAIFDRTGRYIITGSDDRLVKIWSMETARCLASCRGHSGDITDLAVSSNNTMIAAASNDKVIRVWRLPDGAPVSVLR 271 (1113)
T ss_pred heeeeeeccccceEeecCccceeeeeeccchhhhccCCCCccccchhccchhhhhhhhcccCceEEEEecCCCchHHHHh
Confidence 367778889999999999999999997 46999999999998 7789999999999999999999999999
Q ss_pred CCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCc---cccc-----------------cccC-----CCceeee
Q 008820 290 GHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHE---PLKK-----------------WNEE-----KDWRYSG 344 (552)
Q Consensus 290 ~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~---~~~~-----------------~~~~-----~~~~~~~ 344 (552)
+|++.|++++|+|- .+.+.||++++||.+-..... +... +... ...+...
T Consensus 272 ghtgavtaiafsP~-----~sss~dgt~~~wd~r~~~~~y~prp~~~~~~~~~~s~~~~~~~~~f~Tgs~d~ea~n~e~~ 346 (1113)
T KOG0644|consen 272 GHTGAVTAIAFSPR-----ASSSDDGTCRIWDARLEPRIYVPRPLKFTEKDLVDSILFENNGDRFLTGSRDGEARNHEFE 346 (1113)
T ss_pred ccccceeeeccCcc-----ccCCCCCceEeccccccccccCCCCCCcccccceeeeeccccccccccccCCcccccchhh
Confidence 99999999999984 478899999999987211000 0000 0000 0000000
Q ss_pred EEE-------Eee---C-CCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe--CC-EEEEEeCCCcEEEEECC
Q 008820 345 IHA-------LTT---S-GRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC--NG-VLYSGSRDGTIRLWSLS 410 (552)
Q Consensus 345 ~~~-------~~~---~-~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~-~l~s~~~dg~i~iwd~~ 410 (552)
+.+ |.. + ..+.+++-.+-.+++|++.+|...+.+.+|...+..+.++ +. ...+++.||...|||+-
T Consensus 347 ~l~~~~~~lif~t~ssd~~~~~~~ar~~~~~~vwnl~~g~l~H~l~ghsd~~yvLd~Hpfn~ri~msag~dgst~iwdi~ 426 (1113)
T KOG0644|consen 347 QLAWRSNLLIFVTRSSDLSSIVVTARNDHRLCVWNLYTGQLLHNLMGHSDEVYVLDVHPFNPRIAMSAGYDGSTIIWDIW 426 (1113)
T ss_pred HhhhhccceEEEeccccccccceeeeeeeEeeeeecccchhhhhhcccccceeeeeecCCCcHhhhhccCCCceEeeecc
Confidence 000 000 1 1234444556678899999999999999999999999999 33 67799999999999999
Q ss_pred CCceeEEEecCCCCceEEEEEEcCCCCEEEEEECCCcEEEEeCC
Q 008820 411 DHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRND 454 (552)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~ 454 (552)
.|.+++.+...+. .... ..|+++|..++....-|.++|...+
T Consensus 427 eg~pik~y~~gh~-kl~d-~kFSqdgts~~lsd~hgql~i~g~g 468 (1113)
T KOG0644|consen 427 EGIPIKHYFIGHG-KLVD-GKFSQDGTSIALSDDHGQLYILGTG 468 (1113)
T ss_pred cCCcceeeecccc-eeec-cccCCCCceEecCCCCCceEEeccC
Confidence 9998888776543 3333 4899999999998888999998754
No 190
>PRK11028 6-phosphogluconolactonase; Provisional
Probab=99.65 E-value=4.1e-13 Score=131.64 Aligned_cols=267 Identities=13% Similarity=0.158 Sum_probs=162.3
Q ss_pred EEEEeCCCcEEEEeCCC-Ce--EEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCccccccccCCCce
Q 008820 265 LFSSSFDKSIHVWSLKD-FS--HVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWR 341 (552)
Q Consensus 265 l~s~s~dg~I~iwd~~~-~~--~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~ 341 (552)
+++...|+.|++||+.+ ++ .+.++. +.+....++++|+++.+++++..++.|.+|+++............... .
T Consensus 5 y~~~~~~~~I~~~~~~~~g~l~~~~~~~-~~~~~~~l~~spd~~~lyv~~~~~~~i~~~~~~~~g~l~~~~~~~~~~--~ 81 (330)
T PRK11028 5 YIASPESQQIHVWNLNHEGALTLLQVVD-VPGQVQPMVISPDKRHLYVGVRPEFRVLSYRIADDGALTFAAESPLPG--S 81 (330)
T ss_pred EEEcCCCCCEEEEEECCCCceeeeeEEe-cCCCCccEEECCCCCEEEEEECCCCcEEEEEECCCCceEEeeeecCCC--C
Confidence 34447799999999964 33 455554 345677889999887666666778999999997322111122111111 1
Q ss_pred eeeEEEEeeCCCEEEEeeC-CCcEEEEECCC-C---ceeEEecCCCCCeEEEEEe-CC-EE-EEEeCCCcEEEEECCCCc
Q 008820 342 YSGIHALTTSGRYLYTGSG-DRTIKAWSLLD-G---TLSCTMSGHKSAVSTLAVC-NG-VL-YSGSRDGTIRLWSLSDHS 413 (552)
Q Consensus 342 ~~~~~~~~~~~~~l~sgs~-dg~i~iwd~~~-~---~~~~~~~~h~~~v~~l~~~-~~-~l-~s~~~dg~i~iwd~~~~~ 413 (552)
..-.+++++++.+++++. ++.|.+||+++ + +.+..+. +.....+++++ ++ ++ ++...++.|.+||+.+..
T Consensus 82 -p~~i~~~~~g~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~-~~~~~~~~~~~p~g~~l~v~~~~~~~v~v~d~~~~g 159 (330)
T PRK11028 82 -PTHISTDHQGRFLFSASYNANCVSVSPLDKDGIPVAPIQIIE-GLEGCHSANIDPDNRTLWVPCLKEDRIRLFTLSDDG 159 (330)
T ss_pred -ceEEEECCCCCEEEEEEcCCCeEEEEEECCCCCCCCceeecc-CCCcccEeEeCCCCCEEEEeeCCCCEEEEEEECCCC
Confidence 123578899997777764 88999999964 3 2233333 23345677788 33 55 455567999999997643
Q ss_pred eeE-----EEecCCCCceEEEEEEcCCCCEEEEEEC-CCcEEEEeCCc------ceeeeeccc------ceE--EEEEec
Q 008820 414 LLT-----VLEEDSSGAVSSVLSLTAVQHTLVVSHE-SGSIKVWRNDK------FMKSMQTHK------GSV--FAVFLE 473 (552)
Q Consensus 414 ~~~-----~~~~~~~~~~~~~~~~s~~~~~l~~g~~-dg~i~iwd~~~------~~~~~~~h~------~~v--~~v~~~ 473 (552)
.+. ......... ...+.|+|++++++++.. ++.|.+||+.. .++.+..+. ... ..++++
T Consensus 160 ~l~~~~~~~~~~~~g~~-p~~~~~~pdg~~lyv~~~~~~~v~v~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~i~~~pd 238 (330)
T PRK11028 160 HLVAQEPAEVTTVEGAG-PRHMVFHPNQQYAYCVNELNSSVDVWQLKDPHGEIECVQTLDMMPADFSDTRWAADIHITPD 238 (330)
T ss_pred cccccCCCceecCCCCC-CceEEECCCCCEEEEEecCCCEEEEEEEeCCCCCEEEEEEEecCCCcCCCCccceeEEECCC
Confidence 221 111111111 223689999999988876 89999999642 122222211 111 234569
Q ss_pred CCEEEEEeC-CCeEEEEecCCCeeeeeeccCCCcccCcceEEEEEeC--CeEEEEe-CCCeEEEEEecCC
Q 008820 474 GKWLFTGGW-DKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQ--GKLFVGC-ADRTVKIALCNRQ 539 (552)
Q Consensus 474 ~~~l~sgs~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~~--~~l~s~s-~Dg~v~iw~~~~~ 539 (552)
+++++++.. ++.|.+|++............ .........+.+++ .+|+++. .+++|.+|+++..
T Consensus 239 g~~lyv~~~~~~~I~v~~i~~~~~~~~~~~~--~~~~~~p~~~~~~~dg~~l~va~~~~~~v~v~~~~~~ 306 (330)
T PRK11028 239 GRHLYACDRTASLISVFSVSEDGSVLSFEGH--QPTETQPRGFNIDHSGKYLIAAGQKSHHISVYEIDGE 306 (330)
T ss_pred CCEEEEecCCCCeEEEEEEeCCCCeEEEeEE--EeccccCCceEECCCCCEEEEEEccCCcEEEEEEcCC
Confidence 999998854 789999999643211111111 11112344567774 3466655 4899999998743
No 191
>KOG0644 consensus Uncharacterized conserved protein, contains WD40 repeat and BROMO domains [General function prediction only]
Probab=99.64 E-value=2.9e-16 Score=156.13 Aligned_cols=245 Identities=19% Similarity=0.285 Sum_probs=182.7
Q ss_pred EEeecCccceEEEEEc--CCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCC
Q 008820 246 KDLQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFS 323 (552)
Q Consensus 246 ~~l~~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~ 323 (552)
..|.||.++|.|..|. |.++++|+.|..|+||..+++.++.+..||.+.|+.++.+.+
T Consensus 184 krLlgH~naVyca~fDrtg~~Iitgsdd~lvKiwS~et~~~lAs~rGhs~ditdlavs~~-------------------- 243 (1113)
T KOG0644|consen 184 KRLLGHRNAVYCAIFDRTGRYIITGSDDRLVKIWSMETARCLASCRGHSGDITDLAVSSN-------------------- 243 (1113)
T ss_pred HHHHhhhhheeeeeeccccceEeecCccceeeeeeccchhhhccCCCCccccchhccchh--------------------
Confidence 4478999999999999 999999999999999999999999999999999998876432
Q ss_pred CCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEeCCEEEEEeCCCc
Q 008820 324 FPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVCNGVLYSGSRDGT 403 (552)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~~~dg~ 403 (552)
+..+++++.|..|++|.+.++.++..+.+|++.|++++|++-. +.+.||+
T Consensus 244 ----------------------------n~~iaaaS~D~vIrvWrl~~~~pvsvLrghtgavtaiafsP~~--sss~dgt 293 (1113)
T KOG0644|consen 244 ----------------------------NTMIAAASNDKVIRVWRLPDGAPVSVLRGHTGAVTAIAFSPRA--SSSDDGT 293 (1113)
T ss_pred ----------------------------hhhhhhcccCceEEEEecCCCchHHHHhccccceeeeccCccc--cCCCCCc
Confidence 1257778899999999999999999999999999999998543 7889999
Q ss_pred EEEEECCCCceeEE---EecCCCCceEEEEEEcCCCCEEEEEECCCcEEEEeCCcceeeeecccceEEEEEe---cCCEE
Q 008820 404 IRLWSLSDHSLLTV---LEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDKFMKSMQTHKGSVFAVFL---EGKWL 477 (552)
Q Consensus 404 i~iwd~~~~~~~~~---~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~~~~~~~~~h~~~v~~v~~---~~~~l 477 (552)
+++||.+-.-.+.. ..... +.....+-+..++.-+++|+.|+.-..|....+. .+...+.-+.. ...+.
T Consensus 294 ~~~wd~r~~~~~y~prp~~~~~-~~~~~s~~~~~~~~~f~Tgs~d~ea~n~e~~~l~----~~~~~lif~t~ssd~~~~~ 368 (1113)
T KOG0644|consen 294 CRIWDARLEPRIYVPRPLKFTE-KDLVDSILFENNGDRFLTGSRDGEARNHEFEQLA----WRSNLLIFVTRSSDLSSIV 368 (1113)
T ss_pred eEeccccccccccCCCCCCccc-ccceeeeeccccccccccccCCcccccchhhHhh----hhccceEEEeccccccccc
Confidence 99999982111111 11111 2223335667778889999999998888754321 12221111111 23566
Q ss_pred EEEeCCCeEEEEecCCCeeeeeeccCCCcccCcceEEEEEeC--Ce-EEEEeCCCeEEEEEecCCcceeEEEeccc
Q 008820 478 FTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQ--GK-LFVGCADRTVKIALCNRQIPEIFSLLLHI 550 (552)
Q Consensus 478 ~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~~--~~-l~s~s~Dg~v~iw~~~~~~~~~~~~~gh~ 550 (552)
+++-.+-.+++|++.++.+......+ ...+..+.++| .+ ..+++.||...|||+-...+.-..+.||.
T Consensus 369 ~~ar~~~~~~vwnl~~g~l~H~l~gh-----sd~~yvLd~Hpfn~ri~msag~dgst~iwdi~eg~pik~y~~gh~ 439 (1113)
T KOG0644|consen 369 VTARNDHRLCVWNLYTGQLLHNLMGH-----SDEVYVLDVHPFNPRIAMSAGYDGSTIIWDIWEGIPIKHYFIGHG 439 (1113)
T ss_pred eeeeeeeEeeeeecccchhhhhhccc-----ccceeeeeecCCCcHhhhhccCCCceEeeecccCCcceeeecccc
Confidence 77778889999999988655443332 55678888885 33 66899999999999987776655567764
No 192
>KOG0649 consensus WD40 repeat protein [General function prediction only]
Probab=99.64 E-value=7.8e-14 Score=119.88 Aligned_cols=229 Identities=16% Similarity=0.192 Sum_probs=160.6
Q ss_pred eEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCc-------cccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEE
Q 008820 295 VMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHE-------PLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAW 367 (552)
Q Consensus 295 v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iw 367 (552)
|.+-+++|..+ +|++|..+|.|.+..+.+..... .+-.... +..++..+.....+|++|+. |.|+-|
T Consensus 13 vf~qa~sp~~~-~l~agn~~G~iav~sl~sl~s~sa~~~gk~~iv~eqa----hdgpiy~~~f~d~~Lls~gd-G~V~gw 86 (325)
T KOG0649|consen 13 VFAQAISPSKQ-YLFAGNLFGDIAVLSLKSLDSGSAEPPGKLKIVPEQA----HDGPIYYLAFHDDFLLSGGD-GLVYGW 86 (325)
T ss_pred HHHHhhCCcce-EEEEecCCCeEEEEEehhhhccccCCCCCcceeeccc----cCCCeeeeeeehhheeeccC-ceEEEe
Confidence 44456778554 78999999999999887432111 1111112 23345566666677888765 999999
Q ss_pred ECCCCce------eEEe--cCCC-----CCeEEEEEe--CCEEEEEeCCCcEEEEECCCCceeEEEecCCCCceEEEEEE
Q 008820 368 SLLDGTL------SCTM--SGHK-----SAVSTLAVC--NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSL 432 (552)
Q Consensus 368 d~~~~~~------~~~~--~~h~-----~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 432 (552)
..+.... .... .-|. ..|+++... .+-++.++.|+.++.||+++|+...++++|. .-+.++ ..
T Consensus 87 ~W~E~~es~~~K~lwe~~~P~~~~~~evPeINam~ldP~enSi~~AgGD~~~y~~dlE~G~i~r~~rGHt-DYvH~v-v~ 164 (325)
T KOG0649|consen 87 EWNEEEESLATKRLWEVKIPMQVDAVEVPEINAMWLDPSENSILFAGGDGVIYQVDLEDGRIQREYRGHT-DYVHSV-VG 164 (325)
T ss_pred eehhhhhhccchhhhhhcCccccCcccCCccceeEeccCCCcEEEecCCeEEEEEEecCCEEEEEEcCCc-ceeeee-ee
Confidence 7653211 1111 1122 357777776 4567777799999999999999999999885 444443 34
Q ss_pred cCCCCEEEEEECCCcEEEEeCCc--ceeeee---------cc-cceEEEEEecCCEEEEEeCCCeEEEEecCCCeeeeee
Q 008820 433 TAVQHTLVVSHESGSIKVWRNDK--FMKSMQ---------TH-KGSVFAVFLEGKWLFTGGWDKTVSVQELAGDEFEEDV 500 (552)
Q Consensus 433 s~~~~~l~~g~~dg~i~iwd~~~--~~~~~~---------~h-~~~v~~v~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~ 500 (552)
-.....+++|++||++++||.++ .++.+. .| ..+|.+++.+..+|++|+ ...+.+|.++..+....+
T Consensus 165 R~~~~qilsG~EDGtvRvWd~kt~k~v~~ie~yk~~~~lRp~~g~wigala~~edWlvCGg-Gp~lslwhLrsse~t~vf 243 (325)
T KOG0649|consen 165 RNANGQILSGAEDGTVRVWDTKTQKHVSMIEPYKNPNLLRPDWGKWIGALAVNEDWLVCGG-GPKLSLWHLRSSESTCVF 243 (325)
T ss_pred cccCcceeecCCCccEEEEeccccceeEEeccccChhhcCcccCceeEEEeccCceEEecC-CCceeEEeccCCCceEEE
Confidence 33445789999999999999663 333332 22 246788888999999887 457999999988776665
Q ss_pred ccCCCcccCcceEEEEEeCCeEEEEeCCCeEEEEEecC
Q 008820 501 IPTGAIPCGSVITALLYWQGKLFVGCADRTVKIALCNR 538 (552)
Q Consensus 501 ~~~~~~~~~~~v~~l~~~~~~l~s~s~Dg~v~iw~~~~ 538 (552)
.. .+.+..+.|.++.+++++..+.|.-|.++.
T Consensus 244 pi------pa~v~~v~F~~d~vl~~G~g~~v~~~~l~G 275 (325)
T KOG0649|consen 244 PI------PARVHLVDFVDDCVLIGGEGNHVQSYTLNG 275 (325)
T ss_pred ec------ccceeEeeeecceEEEeccccceeeeeecc
Confidence 44 566888999999999999999999998874
No 193
>KOG0650 consensus WD40 repeat nucleolar protein Bop1, involved in ribosome biogenesis [Translation, ribosomal structure and biogenesis]
Probab=99.64 E-value=4.5e-14 Score=135.91 Aligned_cols=267 Identities=15% Similarity=0.200 Sum_probs=193.0
Q ss_pred CCCCCccccceeeecCcceEEEeeCCCeEEEEEeec--------CccceEEEEEc---CCEEEEEeCCCcEEEEeCCCC-
Q 008820 215 ENSDGADIDQARAAGGVKDLVNGLSKGNVKFKDLQG--------HRDCVTGLAVG---GGFLFSSSFDKSIHVWSLKDF- 282 (552)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--------H~~~V~~l~~s---~~~l~s~s~dg~I~iwd~~~~- 282 (552)
...+...+.+....+.+..+++|..+|.+++|.+.+ -.+.|.|++|+ ...++.++....+.|-+..-|
T Consensus 396 yrGHtg~Vr~iSvdp~G~wlasGsdDGtvriWEi~TgRcvr~~~~d~~I~~vaw~P~~~~~vLAvA~~~~~~ivnp~~G~ 475 (733)
T KOG0650|consen 396 YRGHTGLVRSISVDPSGEWLASGSDDGTVRIWEIATGRCVRTVQFDSEIRSVAWNPLSDLCVLAVAVGECVLIVNPIFGD 475 (733)
T ss_pred EeccCCeEEEEEecCCcceeeecCCCCcEEEEEeecceEEEEEeecceeEEEEecCCCCceeEEEEecCceEEeCccccc
Confidence 344455677777888999999999999999999754 35689999998 333444444444555443211
Q ss_pred ------------------------------------eEEEEEeCCCCCeEEEEEecCCCCEEEEEcC--CCcEEEEeCCC
Q 008820 283 ------------------------------------SHVHTFKGHDHKVMAVVYVDEDQPLCISGDS--GGGIFVWSFSF 324 (552)
Q Consensus 283 ------------------------------------~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~--dg~i~vwd~~~ 324 (552)
+-++..-.|...|..+.|+..|.++..++.. ...|.|.++..
T Consensus 476 ~~e~~~t~ell~~~~~~~~p~~~~~~W~~~~~~e~~~~v~~~I~~~k~i~~vtWHrkGDYlatV~~~~~~~~VliHQLSK 555 (733)
T KOG0650|consen 476 RLEVGPTKELLASAPNESEPDAAVVTWSRASLDELEKGVCIVIKHPKSIRQVTWHRKGDYLATVMPDSGNKSVLIHQLSK 555 (733)
T ss_pred hhhhcchhhhhhcCCCccCCcccceeechhhhhhhccceEEEEecCCccceeeeecCCceEEEeccCCCcceEEEEeccc
Confidence 0012223477899999999987755433332 35688888876
Q ss_pred CCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe--CCEEEEEeCCC
Q 008820 325 PLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC--NGVLYSGSRDG 402 (552)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg 402 (552)
.....+++...+. .....|+|...++++++. ..|++||+.....++++......|.+++.+ ++.|+.|+.|+
T Consensus 556 ~~sQ~PF~kskG~-----vq~v~FHPs~p~lfVaTq-~~vRiYdL~kqelvKkL~tg~kwiS~msihp~GDnli~gs~d~ 629 (733)
T KOG0650|consen 556 RKSQSPFRKSKGL-----VQRVKFHPSKPYLFVATQ-RSVRIYDLSKQELVKKLLTGSKWISSMSIHPNGDNLILGSYDK 629 (733)
T ss_pred ccccCchhhcCCc-----eeEEEecCCCceEEEEec-cceEEEehhHHHHHHHHhcCCeeeeeeeecCCCCeEEEecCCC
Confidence 5544444332221 123467777778888876 679999999988888888788899999999 45999999999
Q ss_pred cEEEEECCCC-ceeEEEecCCCCceEEEEEEcCCCCEEEEEECCCcEEEEe------C-C----cceeeeecccce----
Q 008820 403 TIRLWSLSDH-SLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWR------N-D----KFMKSMQTHKGS---- 466 (552)
Q Consensus 403 ~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd------~-~----~~~~~~~~h~~~---- 466 (552)
.+..+|+.-+ ++.+++..| ...+.. +++++.-.++++|+.||++.|+. + . -+++.+.+|...
T Consensus 630 k~~WfDldlsskPyk~lr~H-~~avr~-Va~H~ryPLfas~sdDgtv~Vfhg~VY~Dl~qnpliVPlK~L~gH~~~~~~g 707 (733)
T KOG0650|consen 630 KMCWFDLDLSSKPYKTLRLH-EKAVRS-VAFHKRYPLFASGSDDGTVIVFHGMVYNDLLQNPLIVPLKRLRGHEKTNDLG 707 (733)
T ss_pred eeEEEEcccCcchhHHhhhh-hhhhhh-hhhccccceeeeecCCCcEEEEeeeeehhhhcCCceEeeeeccCceeecccc
Confidence 9999999765 455555555 455555 58999999999999999999984 2 1 256778888766
Q ss_pred EEEEEe--cCCEEEEEeCCCeEEEE
Q 008820 467 VFAVFL--EGKWLFTGGWDKTVSVQ 489 (552)
Q Consensus 467 v~~v~~--~~~~l~sgs~dg~i~iw 489 (552)
|....| ..-+|++++.||+|++|
T Consensus 708 VLd~~wHP~qpWLfsAGAd~tirlf 732 (733)
T KOG0650|consen 708 VLDTIWHPRQPWLFSAGADGTIRLF 732 (733)
T ss_pred eEeecccCCCceEEecCCCceEEee
Confidence 776666 77899999999999998
No 194
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=99.64 E-value=6.4e-17 Score=139.79 Aligned_cols=107 Identities=20% Similarity=0.246 Sum_probs=84.5
Q ss_pred cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhhh
Q 008820 18 CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDY 96 (552)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~~ 96 (552)
|||..+.+.. ...+++|||.|||||++ .+..++..+||||.||+||-||.|+ ||.+++...
T Consensus 158 GvAi~l~~g~---~~~G~~GtP~fmaPEvv---------------rkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~r 219 (355)
T KOG0033|consen 158 GLAIEVNDGE---AWHGFAGTPGYLSPEVL---------------KKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHR 219 (355)
T ss_pred ceEEEeCCcc---ccccccCCCcccCHHHh---------------hcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHH
Confidence 5677777554 47899999999999999 3466778999999999999999999 998865552
Q ss_pred hhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHH
Q 008820 97 IRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVW 159 (552)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~ 159 (552)
| ++.+.....+.+.+.+....++.++++++||..+|.+|.++.|..
T Consensus 220 l-----------------ye~I~~g~yd~~~~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL 265 (355)
T KOG0033|consen 220 L-----------------YEQIKAGAYDYPSPEWDTVTPEAKSLIRRMLTVNPKKRITADEAL 265 (355)
T ss_pred H-----------------HHHHhccccCCCCcccCcCCHHHHHHHHHHhccChhhhccHHHHh
Confidence 2 333334445566667777888899999999999999999987643
No 195
>KOG1963 consensus WD40 repeat protein [General function prediction only]
Probab=99.63 E-value=1.5e-13 Score=138.53 Aligned_cols=282 Identities=17% Similarity=0.202 Sum_probs=193.8
Q ss_pred ecCccceEEEEEc--CCEEEEEeCCCcEEEEeCCC----CeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeC
Q 008820 249 QGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKD----FSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSF 322 (552)
Q Consensus 249 ~~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~----~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~ 322 (552)
..|.-.+++.+++ ++++|+|..||.|.+|.--. ......+.=|...|.+++|+++|. +|++|+..|.+.+|.+
T Consensus 202 ~~Htf~~t~~~~spn~~~~Aa~d~dGrI~vw~d~~~~~~~~t~t~lHWH~~~V~~L~fS~~G~-~LlSGG~E~VLv~Wq~ 280 (792)
T KOG1963|consen 202 VHHTFNITCVALSPNERYLAAGDSDGRILVWRDFGSSDDSETCTLLHWHHDEVNSLSFSSDGA-YLLSGGREGVLVLWQL 280 (792)
T ss_pred hhhcccceeEEeccccceEEEeccCCcEEEEeccccccccccceEEEecccccceeEEecCCc-eEeecccceEEEEEee
Confidence 3577778999999 99999999999999996322 123455667999999999999877 6799999999999999
Q ss_pred CCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCceeEEecCC-----------CCCeEEEEEe
Q 008820 323 SFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGH-----------KSAVSTLAVC 391 (552)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h-----------~~~v~~l~~~ 391 (552)
.+++ .+-+..+.. ...-..+++|+++.+....|+.|.+....+.....++.+- .+-.+.++++
T Consensus 281 ~T~~-kqfLPRLgs-----~I~~i~vS~ds~~~sl~~~DNqI~li~~~dl~~k~tIsgi~~~~~~~k~~~~~l~t~~~id 354 (792)
T KOG1963|consen 281 ETGK-KQFLPRLGS-----PILHIVVSPDSDLYSLVLEDNQIHLIKASDLEIKSTISGIKPPTPSTKTRPQSLTTGVSID 354 (792)
T ss_pred cCCC-cccccccCC-----eeEEEEEcCCCCeEEEEecCceEEEEeccchhhhhhccCccCCCccccccccccceeEEEc
Confidence 9876 333332221 1122367899999999999999999988665544443321 3334556666
Q ss_pred --CCEEEEEeCCCcEEEEECCCCceeEEEecC----CCCc-----eEEEEEEcCCCCEEEEEE--------CCC--cEEE
Q 008820 392 --NGVLYSGSRDGTIRLWSLSDHSLLTVLEED----SSGA-----VSSVLSLTAVQHTLVVSH--------ESG--SIKV 450 (552)
Q Consensus 392 --~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~----~~~~-----~~~~~~~s~~~~~l~~g~--------~dg--~i~i 450 (552)
.+.++-.+..|.|.+||+.+.+.+..+... ..+. .....+.+..|.++++.- .|| .+++
T Consensus 355 pr~~~~vln~~~g~vQ~ydl~td~~i~~~~v~~~n~~~~~~n~~v~itav~~~~~gs~maT~E~~~d~~~~~~~e~~LKF 434 (792)
T KOG1963|consen 355 PRTNSLVLNGHPGHVQFYDLYTDSTIYKLQVCDENYSDGDVNIQVGITAVARSRFGSWMATLEARIDKFNFFDGEVSLKF 434 (792)
T ss_pred CCCCceeecCCCceEEEEeccccceeeeEEEEeecccCCcceeEEeeeeehhhccceEEEEeeeeehhhhccCceEEEEE
Confidence 458888899999999999888766655421 1111 111234556688888763 233 4677
Q ss_pred EeCCcc-------eeeeecccceEEEEEe----cCCEEEEEeCCCeEEEEecCCCe------eeeeeccCCCcccCcceE
Q 008820 451 WRNDKF-------MKSMQTHKGSVFAVFL----EGKWLFTGGWDKTVSVQELAGDE------FEEDVIPTGAIPCGSVIT 513 (552)
Q Consensus 451 wd~~~~-------~~~~~~h~~~v~~v~~----~~~~l~sgs~dg~i~iwd~~~~~------~~~~~~~~~~~~~~~~v~ 513 (552)
|-.... ......|...+....+ ....+++++.||.+++|-+.+.+ -.+.....+.. +..+++
T Consensus 435 W~~n~~~kt~~L~T~I~~PH~~~~vat~~~~~~rs~~~vta~~dg~~KiW~~~~~~n~~k~~s~W~c~~i~sy-~k~~i~ 513 (792)
T KOG1963|consen 435 WQYNPNSKTFILNTKINNPHGNAFVATIFLNPTRSVRCVTASVDGDFKIWVFTDDSNIYKKSSNWTCKAIGSY-HKTPIT 513 (792)
T ss_pred EEEcCCcceeEEEEEEecCCCceeEEEEEecCcccceeEEeccCCeEEEEEEecccccCcCccceEEeeeecc-ccCccc
Confidence 853221 1122457766555443 34489999999999999884321 11222222221 467789
Q ss_pred EEEEe-CCeEEEEeCCCeEEEEEecC
Q 008820 514 ALLYW-QGKLFVGCADRTVKIALCNR 538 (552)
Q Consensus 514 ~l~~~-~~~l~s~s~Dg~v~iw~~~~ 538 (552)
+++|+ +|.+++.+.|++|.+||...
T Consensus 514 a~~fs~dGslla~s~~~~Itiwd~~~ 539 (792)
T KOG1963|consen 514 ALCFSQDGSLLAVSFDDTITIWDYDT 539 (792)
T ss_pred chhhcCCCcEEEEecCCEEEEecCCC
Confidence 99999 67899999999999999984
No 196
>KOG1517 consensus Guanine nucleotide binding protein MIP1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.63 E-value=4.4e-14 Score=144.31 Aligned_cols=245 Identities=18% Similarity=0.208 Sum_probs=160.8
Q ss_pred CeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCccccccccCCCceeeeEEEEee-CCCEEEEeeCCCcEEEEECC-C
Q 008820 294 KVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTT-SGRYLYTGSGDRTIKAWSLL-D 371 (552)
Q Consensus 294 ~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~sgs~dg~i~iwd~~-~ 371 (552)
+-..+.|+|-.. .++++...-.|++||.+.++....+..-.... ..+..+.-++- |...+++|+.||.|+||+-- +
T Consensus 1066 ~pk~~~~hpf~p-~i~~ad~r~~i~vwd~e~~~~l~~F~n~~~~~-t~Vs~l~liNe~D~aLlLtas~dGvIRIwk~y~~ 1143 (1387)
T KOG1517|consen 1066 PPKTLKFHPFEP-QIAAADDRERIRVWDWEKGRLLNGFDNGAFPD-TRVSDLELINEQDDALLLTASSDGVIRIWKDYAD 1143 (1387)
T ss_pred CCceeeecCCCc-eeEEcCCcceEEEEecccCceeccccCCCCCC-CccceeeeecccchhheeeeccCceEEEeccccc
Confidence 456677777544 56778778899999998765433322211111 11222222333 23489999999999999743 2
Q ss_pred ----CceeEEecC-------CCCCeEEEEEe--CCEEEEEeCCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCE
Q 008820 372 ----GTLSCTMSG-------HKSAVSTLAVC--NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHT 438 (552)
Q Consensus 372 ----~~~~~~~~~-------h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ 438 (552)
.+.+..+.+ ..+.=.-+.|. .++|+++|.-..|+|||.........+.......++...+-...|+.
T Consensus 1144 ~~~~~eLVTaw~~Ls~~~~~~r~~~~v~dWqQ~~G~Ll~tGd~r~IRIWDa~~E~~~~diP~~s~t~vTaLS~~~~~gn~ 1223 (1387)
T KOG1517|consen 1144 KWKKPELVTAWSSLSDQLPGARGTGLVVDWQQQSGHLLVTGDVRSIRIWDAHKEQVVADIPYGSSTLVTALSADLVHGNI 1223 (1387)
T ss_pred ccCCceeEEeeccccccCccCCCCCeeeehhhhCCeEEecCCeeEEEEEecccceeEeecccCCCccceeecccccCCce
Confidence 223332221 11111233454 56888888899999999998888888776654444443334455899
Q ss_pred EEEEECCCcEEEEeCC-----cceeeeecccce--EEEEEe--cCC-EEEEEeCCCeEEEEecCCCeeeeeeccCCCccc
Q 008820 439 LVVSHESGSIKVWRND-----KFMKSMQTHKGS--VFAVFL--EGK-WLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPC 508 (552)
Q Consensus 439 l~~g~~dg~i~iwd~~-----~~~~~~~~h~~~--v~~v~~--~~~-~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~ 508 (552)
+++|..||.|++||.+ ..+..++.|... |..+++ .|- .|++|+.||.|++||++............+-.-
T Consensus 1224 i~AGfaDGsvRvyD~R~a~~ds~v~~~R~h~~~~~Iv~~slq~~G~~elvSgs~~G~I~~~DlR~~~~e~~~~iv~~~~y 1303 (1387)
T KOG1517|consen 1224 IAAGFADGSVRVYDRRMAPPDSLVCVYREHNDVEPIVHLSLQRQGLGELVSGSQDGDIQLLDLRMSSKETFLTIVAHWEY 1303 (1387)
T ss_pred EEEeecCCceEEeecccCCccccceeecccCCcccceeEEeecCCCcceeeeccCCeEEEEecccCcccccceeeecccc
Confidence 9999999999999955 367788889887 888887 333 599999999999999998522222222111111
Q ss_pred CcceEEEEEeC--CeEEEEeCCCeEEEEEecCCcc
Q 008820 509 GSVITALLYWQ--GKLFVGCADRTVKIALCNRQIP 541 (552)
Q Consensus 509 ~~~v~~l~~~~--~~l~s~s~Dg~v~iw~~~~~~~ 541 (552)
.+..+++..++ ..+++|+. +.|+||++.....
T Consensus 1304 Gs~lTal~VH~hapiiAsGs~-q~ikIy~~~G~~l 1337 (1387)
T KOG1517|consen 1304 GSALTALTVHEHAPIIASGSA-QLIKIYSLSGEQL 1337 (1387)
T ss_pred CccceeeeeccCCCeeeecCc-ceEEEEecChhhh
Confidence 33588888885 34777777 9999999985443
No 197
>KOG1963 consensus WD40 repeat protein [General function prediction only]
Probab=99.62 E-value=2.4e-13 Score=137.04 Aligned_cols=308 Identities=15% Similarity=0.174 Sum_probs=207.8
Q ss_pred ccceeeecCcceEEEeeCCCeEEEEE-------------eecCccceEEEEEc--CCEEEEEeCCCcEEEEeCCCCeEEE
Q 008820 222 IDQARAAGGVKDLVNGLSKGNVKFKD-------------LQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVH 286 (552)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~-------------l~~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~~~~~ 286 (552)
+...+.++.+..++++..+|.+.+|. +.-|.+.|++++|+ |.+|+||+..|.+.+|.+.+++ .+
T Consensus 208 ~t~~~~spn~~~~Aa~d~dGrI~vw~d~~~~~~~~t~t~lHWH~~~V~~L~fS~~G~~LlSGG~E~VLv~Wq~~T~~-kq 286 (792)
T KOG1963|consen 208 ITCVALSPNERYLAAGDSDGRILVWRDFGSSDDSETCTLLHWHHDEVNSLSFSSDGAYLLSGGREGVLVLWQLETGK-KQ 286 (792)
T ss_pred ceeEEeccccceEEEeccCCcEEEEeccccccccccceEEEecccccceeEEecCCceEeecccceEEEEEeecCCC-cc
Confidence 67788899999999999999998886 55699999999999 9999999999999999999988 55
Q ss_pred EEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCccccccccCC------CceeeeEEEEeeCCCEEEEeeC
Q 008820 287 TFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEK------DWRYSGIHALTTSGRYLYTGSG 360 (552)
Q Consensus 287 ~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~l~sgs~ 360 (552)
-++.-.++|..+.++|++..+ +....|..|.+....+......+..+.... ........+++|..+.++-.+.
T Consensus 287 fLPRLgs~I~~i~vS~ds~~~-sl~~~DNqI~li~~~dl~~k~tIsgi~~~~~~~k~~~~~l~t~~~idpr~~~~vln~~ 365 (792)
T KOG1963|consen 287 FLPRLGSPILHIVVSPDSDLY-SLVLEDNQIHLIKASDLEIKSTISGIKPPTPSTKTRPQSLTTGVSIDPRTNSLVLNGH 365 (792)
T ss_pred cccccCCeeEEEEEcCCCCeE-EEEecCceEEEEeccchhhhhhccCccCCCccccccccccceeEEEcCCCCceeecCC
Confidence 567778999999999977744 666679999999876544444443333221 1122334567776678888889
Q ss_pred CCcEEEEECCCCceeEEec-----CC------CCCeEEEEEe--CCEEEEEe--------CC--CcEEEEECCCCc----
Q 008820 361 DRTIKAWSLLDGTLSCTMS-----GH------KSAVSTLAVC--NGVLYSGS--------RD--GTIRLWSLSDHS---- 413 (552)
Q Consensus 361 dg~i~iwd~~~~~~~~~~~-----~h------~~~v~~l~~~--~~~l~s~~--------~d--g~i~iwd~~~~~---- 413 (552)
.|.|.+||+.+.+.+..+. .+ .-.+++++.+ +++++|.- .| -.+++|-.....
T Consensus 366 ~g~vQ~ydl~td~~i~~~~v~~~n~~~~~~n~~v~itav~~~~~gs~maT~E~~~d~~~~~~~e~~LKFW~~n~~~kt~~ 445 (792)
T KOG1963|consen 366 PGHVQFYDLYTDSTIYKLQVCDENYSDGDVNIQVGITAVARSRFGSWMATLEARIDKFNFFDGEVSLKFWQYNPNSKTFI 445 (792)
T ss_pred CceEEEEeccccceeeeEEEEeecccCCcceeEEeeeeehhhccceEEEEeeeeehhhhccCceEEEEEEEEcCCcceeE
Confidence 9999999998887766552 11 2235555555 44666653 23 347788765433
Q ss_pred eeEEEecCCCCceEEEEEEcCCCC-EEEEEECCCcEEEEeCC------c------ceeeeecccceEEEEEe--cCCEEE
Q 008820 414 LLTVLEEDSSGAVSSVLSLTAVQH-TLVVSHESGSIKVWRND------K------FMKSMQTHKGSVFAVFL--EGKWLF 478 (552)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~s~~~~-~l~~g~~dg~i~iwd~~------~------~~~~~~~h~~~v~~v~~--~~~~l~ 478 (552)
....+..+|.......+..++... ..++++.||.+++|-.. + +...-..|..++.+..| || .++
T Consensus 446 L~T~I~~PH~~~~vat~~~~~~rs~~~vta~~dg~~KiW~~~~~~n~~k~~s~W~c~~i~sy~k~~i~a~~fs~dG-sll 524 (792)
T KOG1963|consen 446 LNTKINNPHGNAFVATIFLNPTRSVRCVTASVDGDFKIWVFTDDSNIYKKSSNWTCKAIGSYHKTPITALCFSQDG-SLL 524 (792)
T ss_pred EEEEEecCCCceeEEEEEecCcccceeEEeccCCeEEEEEEecccccCcCccceEEeeeeccccCcccchhhcCCC-cEE
Confidence 334444555544444444455444 89999999999999531 1 22222247778888888 56 555
Q ss_pred EEeCCCeEEEEecCC-CeeeeeeccCCCcccCcceEEEEEe----CCeEEEEeCCCeEEEEEec
Q 008820 479 TGGWDKTVSVQELAG-DEFEEDVIPTGAIPCGSVITALLYW----QGKLFVGCADRTVKIALCN 537 (552)
Q Consensus 479 sgs~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~v~~l~~~----~~~l~s~s~Dg~v~iw~~~ 537 (552)
+.+.|++|.+||..+ ..+....... ..++..+.+. .+..+.....+.+.+|++-
T Consensus 525 a~s~~~~Itiwd~~~~~~l~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~WNll 583 (792)
T KOG1963|consen 525 AVSFDDTITIWDYDTKNELLCTEGSR-----NWPIAELLFTAQTQNDGALVHATQQRLSVWNLL 583 (792)
T ss_pred EEecCCEEEEecCCChhhhhcccccc-----ccchHhHhhhcccccccceeeccCceEehHhhh
Confidence 566788999999988 3333322221 1122222222 2334455566778888875
No 198
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.61 E-value=8.9e-14 Score=144.26 Aligned_cols=260 Identities=15% Similarity=0.180 Sum_probs=172.8
Q ss_pred EeCCCCeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCC----ccccccccCCCceeeeEEEEeeCC
Q 008820 277 WSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGH----EPLKKWNEEKDWRYSGIHALTTSG 352 (552)
Q Consensus 277 wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 352 (552)
|+. .|..+..+..|...|..++.+++...++++||.||+|++||...-... +...++... ........+.+.+
T Consensus 1034 W~p-~G~lVAhL~Ehs~~v~k~a~s~~~~s~FvsgS~DGtVKvW~~~k~~~~~~s~rS~ltys~~--~sr~~~vt~~~~~ 1110 (1431)
T KOG1240|consen 1034 WNP-RGILVAHLHEHSSAVIKLAVSSEHTSLFVSGSDDGTVKVWNLRKLEGEGGSARSELTYSPE--GSRVEKVTMCGNG 1110 (1431)
T ss_pred CCc-cceEeehhhhccccccceeecCCCCceEEEecCCceEEEeeehhhhcCcceeeeeEEEecc--CCceEEEEeccCC
Confidence 443 578888899999999999999988789999999999999998743222 111122111 1222344566788
Q ss_pred CEEEEeeCCCcEEEEECCCC--c-----eeEEecCC-CCCeEEE-EEe---CC-EEEEEeCCCcEEEEECCCCceeEEEe
Q 008820 353 RYLYTGSGDRTIKAWSLLDG--T-----LSCTMSGH-KSAVSTL-AVC---NG-VLYSGSRDGTIRLWSLSDHSLLTVLE 419 (552)
Q Consensus 353 ~~l~sgs~dg~i~iwd~~~~--~-----~~~~~~~h-~~~v~~l-~~~---~~-~l~s~~~dg~i~iwd~~~~~~~~~~~ 419 (552)
+.+|+++.||.|++.+++.. + .......+ .+.+.++ ++. .. .++.+..-+.|..||++......+++
T Consensus 1111 ~~~Av~t~DG~v~~~~id~~~~~~~~~~~~ri~n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv~~D~r~~~~~w~lk 1190 (1431)
T KOG1240|consen 1111 DQFAVSTKDGSVRVLRIDHYNVSKRVATQVRIPNLKKDGVVVSMHAFTAIVQSHVLVYATDLSRIVSWDTRMRHDAWRLK 1190 (1431)
T ss_pred CeEEEEcCCCeEEEEEccccccccceeeeeecccccCCCceEEeecccccccceeEEEEEeccceEEecchhhhhHHhhh
Confidence 89999999999999998752 1 11122222 2233333 333 33 78888889999999999988777776
Q ss_pred cCCCCceEEEEEEcCCCCEEEEEECCCcEEEEeCC--cceeeee-cccceEEEEE--e---cCCEEEEEe--CCCeEEEE
Q 008820 420 EDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRND--KFMKSMQ-THKGSVFAVF--L---EGKWLFTGG--WDKTVSVQ 489 (552)
Q Consensus 420 ~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~--~~~~~~~-~h~~~v~~v~--~---~~~~l~sgs--~dg~i~iw 489 (552)
........+.++.+|.+.+++.|+..|.+.+||++ .++..+. .+..++..+. + .....++++ ..+.|.+|
T Consensus 1191 ~~~~hG~vTSi~idp~~~WlviGts~G~l~lWDLRF~~~i~sw~~P~~~~i~~v~~~~~~~~~S~~vs~~~~~~nevs~w 1270 (1431)
T KOG1240|consen 1191 NQLRHGLVTSIVIDPWCNWLVIGTSRGQLVLWDLRFRVPILSWEHPARAPIRHVWLCPTYPQESVSVSAGSSSNNEVSTW 1270 (1431)
T ss_pred cCccccceeEEEecCCceEEEEecCCceEEEEEeecCceeecccCcccCCcceEEeeccCCCCceEEEecccCCCceeee
Confidence 55443344447999999999999999999999976 4444443 2445665543 3 235555554 46889999
Q ss_pred ecCCCeeeeeeccC-CC------ccc-------CcceEEEEEe--CCeEEEEeCCCeEEEEEecCC
Q 008820 490 ELAGDEFEEDVIPT-GA------IPC-------GSVITALLYW--QGKLFVGCADRTVKIALCNRQ 539 (552)
Q Consensus 490 d~~~~~~~~~~~~~-~~------~~~-------~~~v~~l~~~--~~~l~s~s~Dg~v~iw~~~~~ 539 (552)
++.++.....+... +. .+. ........+. ++.+++|+.|..||.||....
T Consensus 1271 n~~~g~~~~vl~~s~~~p~ls~~~Ps~~~~kp~~~~~~~~~~~~~~~~~ltggsd~kIR~wD~~~p 1336 (1431)
T KOG1240|consen 1271 NMETGLRQTVLWASDGAPILSYALPSNDARKPDSLAGISCGVCEKNGFLLTGGSDMKIRKWDPTRP 1336 (1431)
T ss_pred ecccCcceEEEEcCCCCcchhhhcccccCCCCCcccceeeecccCCceeeecCCccceeeccCCCc
Confidence 99988655444332 10 111 1111112222 356999999999999998743
No 199
>KOG1587 consensus Cytoplasmic dynein intermediate chain [Cytoskeleton]
Probab=99.60 E-value=1.4e-13 Score=138.43 Aligned_cols=241 Identities=17% Similarity=0.178 Sum_probs=166.7
Q ss_pred CccceEEEEEc---CCEEEEEeCCCcEEEEeCCCCeE--EEE----EeCCCCCeEEEEEecCCC-CEEEEEcCCCcEEEE
Q 008820 251 HRDCVTGLAVG---GGFLFSSSFDKSIHVWSLKDFSH--VHT----FKGHDHKVMAVVYVDEDQ-PLCISGDSGGGIFVW 320 (552)
Q Consensus 251 H~~~V~~l~~s---~~~l~s~s~dg~I~iwd~~~~~~--~~~----~~~h~~~v~~v~~~~~~~-~~l~s~~~dg~i~vw 320 (552)
-...|+|++|+ ..+++.|+.+|.|.+||+..+.. ... ...|..+++.+.|..+.. .-+++++.||.|..|
T Consensus 241 ~~s~v~~~~f~p~~p~ll~gG~y~GqV~lWD~~~~~~~~~s~ls~~~~sh~~~v~~vvW~~~~~~~~f~s~ssDG~i~~W 320 (555)
T KOG1587|consen 241 SPSEVTCLKFCPFDPNLLAGGCYNGQVVLWDLRKGSDTPPSGLSALEVSHSEPVTAVVWLQNEHNTEFFSLSSDGSICSW 320 (555)
T ss_pred cCCceeEEEeccCCcceEEeeccCceEEEEEccCCCCCCCcccccccccCCcCeEEEEEeccCCCCceEEEecCCcEeee
Confidence 35689999998 89999999999999999987654 222 235899999999986432 347888899999999
Q ss_pred eCCCCCCCccccccccC-------CCceeeeEEEEee-CCCEEEEeeCCCcEEEEECCCC--------ceeEEecCCCCC
Q 008820 321 SFSFPLGHEPLKKWNEE-------KDWRYSGIHALTT-SGRYLYTGSGDRTIKAWSLLDG--------TLSCTMSGHKSA 384 (552)
Q Consensus 321 d~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~-~~~~l~sgs~dg~i~iwd~~~~--------~~~~~~~~h~~~ 384 (552)
+++.-............ ..........|.+ +.+.+++|+.+|.|.--+-... +....+..|.++
T Consensus 321 ~~~~l~~P~e~~~~~~~~~~~~~~~~~~~~t~~~F~~~~p~~FiVGTe~G~v~~~~r~g~~~~~~~~~~~~~~~~~h~g~ 400 (555)
T KOG1587|consen 321 DTDMLSLPVEGLLLESKKHKGQQSSKAVGATSLKFEPTDPNHFIVGTEEGKVYKGCRKGYTPAPEVSYKGHSTFITHIGP 400 (555)
T ss_pred eccccccchhhcccccccccccccccccceeeEeeccCCCceEEEEcCCcEEEEEeccCCcccccccccccccccccCcc
Confidence 88743332111111110 1111222334443 5669999999999887332221 223355678899
Q ss_pred eEEEEEe---CCEEEEEeCCCcEEEEECC-CCceeEEEecCCCCceEEEEEEcCCC-CEEEEEECCCcEEEEeCC----c
Q 008820 385 VSTLAVC---NGVLYSGSRDGTIRLWSLS-DHSLLTVLEEDSSGAVSSVLSLTAVQ-HTLVVSHESGSIKVWRND----K 455 (552)
Q Consensus 385 v~~l~~~---~~~l~s~~~dg~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~~s~~~-~~l~~g~~dg~i~iwd~~----~ 455 (552)
|+++.++ ...+++++ |.++++|... ...++..+..+. ..+.. ++|||.. ..++++..||.+.+||+. .
T Consensus 401 v~~v~~nPF~~k~fls~g-DW~vriWs~~~~~~Pl~~~~~~~-~~v~~-vaWSptrpavF~~~d~~G~l~iWDLl~~~~~ 477 (555)
T KOG1587|consen 401 VYAVSRNPFYPKNFLSVG-DWTVRIWSEDVIASPLLSLDSSP-DYVTD-VAWSPTRPAVFATVDGDGNLDIWDLLQDDEE 477 (555)
T ss_pred eEeeecCCCccceeeeec-cceeEeccccCCCCcchhhhhcc-ceeee-eEEcCcCceEEEEEcCCCceehhhhhccccC
Confidence 9999988 34666666 9999999987 556666665442 23444 6899876 467777889999999964 3
Q ss_pred ceeeeecccceEEEEEe--cCCEEEEEeCCCeEEEEecCCC
Q 008820 456 FMKSMQTHKGSVFAVFL--EGKWLFTGGWDKTVSVQELAGD 494 (552)
Q Consensus 456 ~~~~~~~h~~~v~~v~~--~~~~l~sgs~dg~i~iwd~~~~ 494 (552)
++.+...+......+.+ +|+.|++|...|++++|++...
T Consensus 478 Pv~s~~~~~~~l~~~~~s~~g~~lavGd~~G~~~~~~l~~~ 518 (555)
T KOG1587|consen 478 PVLSQKVCSPALTRVRWSPNGKLLAVGDANGTTHILKLSES 518 (555)
T ss_pred CcccccccccccceeecCCCCcEEEEecCCCcEEEEEcCch
Confidence 45555555444455555 6999999999999999999643
No 200
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=99.60 E-value=2.5e-16 Score=140.06 Aligned_cols=96 Identities=14% Similarity=0.122 Sum_probs=74.9
Q ss_pred cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhhh
Q 008820 18 CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDY 96 (552)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~~ 96 (552)
||||++.+. +-.++|||.|||||++ ....++.++|.|||||++|||+.|+ ||-..+..
T Consensus 189 GFAK~v~~r-----T~TlCGTPeYLAPEii---------------~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~- 247 (355)
T KOG0616|consen 189 GFAKRVSGR-----TWTLCGTPEYLAPEII---------------QSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPI- 247 (355)
T ss_pred cceEEecCc-----EEEecCCccccChHHh---------------hcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChH-
Confidence 899999988 5679999999999999 2345668999999999999999999 99876644
Q ss_pred hhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcc
Q 008820 97 IRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPL 154 (552)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~ 154 (552)
.+++++..-....+..-.+.+++++.++|+.|-.+|..
T Consensus 248 --------------------~iY~KI~~~~v~fP~~fs~~~kdLl~~LL~vD~t~R~g 285 (355)
T KOG0616|consen 248 --------------------QIYEKILEGKVKFPSYFSSDAKDLLKKLLQVDLTKRFG 285 (355)
T ss_pred --------------------HHHHHHHhCcccCCcccCHHHHHHHHHHHhhhhHhhhc
Confidence 33344433333333344556999999999999999954
No 201
>KOG0322 consensus G-protein beta subunit-like protein GNB1L, contains WD repeats [General function prediction only]
Probab=99.60 E-value=5.6e-14 Score=122.23 Aligned_cols=240 Identities=15% Similarity=0.197 Sum_probs=159.1
Q ss_pred eEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCccccccccCCCceeeeEEEEeeC-CCEEEEeeCC
Q 008820 283 SHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTS-GRYLYTGSGD 361 (552)
Q Consensus 283 ~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~sgs~d 361 (552)
.+...+++|.+.|+++.|-.++ .|.+|..-|.|++|++.+......++.+.. ..+..+..- +..+.+-+.|
T Consensus 5 dP~fvLRp~~~~v~s~~fqa~~--rL~sg~~~G~V~~w~lqt~r~~~~~r~~g~------~~it~lq~~p~d~l~tqgRd 76 (323)
T KOG0322|consen 5 DPFFVLRPHSSSVTSVLFQANE--RLMSGLSVGIVKMWVLQTERDLPLIRLFGR------LFITNLQSIPNDSLDTQGRD 76 (323)
T ss_pred CCeeEeccccchheehhhccch--hhhcccccceEEEEEeecCccchhhhhhcc------ceeeceeecCCcchhhcCCC
Confidence 3556778999999999996544 478999999999999987654444432211 112222221 2567777888
Q ss_pred CcEEEEECCCCceeE-------------------------Ee----------------------------cCCCCCeEEE
Q 008820 362 RTIKAWSLLDGTLSC-------------------------TM----------------------------SGHKSAVSTL 388 (552)
Q Consensus 362 g~i~iwd~~~~~~~~-------------------------~~----------------------------~~h~~~v~~l 388 (552)
+.+.+|++.-+..+. .+ .+..+.+.|.
T Consensus 77 ~~L~lw~ia~s~~i~i~Si~~nslgFCrfSl~~~~k~~eqll~yp~rgsde~h~~D~g~~tqv~i~dd~~~~Klgsvmc~ 156 (323)
T KOG0322|consen 77 PLLILWTIAYSAFISIHSIVVNSLGFCRFSLVKKPKNSEQLLEYPSRGSDETHKQDGGDTTQVQIADDSERSKLGSVMCQ 156 (323)
T ss_pred ceEEEEEccCcceEEEeeeeccccccccceeccCCCcchhheecCCcccchhhhhccCccceeEccCchhccccCceeee
Confidence 888888875421000 00 0122456666
Q ss_pred EEe--C-C--EEEEEeCCCcEEEEECCCCceeEEEec---------CCCCceEEEEEEcCCCCEEEEEECCCcEEEEeCC
Q 008820 389 AVC--N-G--VLYSGSRDGTIRLWSLSDHSLLTVLEE---------DSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRND 454 (552)
Q Consensus 389 ~~~--~-~--~l~s~~~dg~i~iwd~~~~~~~~~~~~---------~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~ 454 (552)
.+. . . ++++|.++|.+.+||+.++..+..+.. .+...+.+ +.+.+.-..=++|+.+..+..|++.
T Consensus 157 ~~~~~c~s~~lllaGyEsghvv~wd~S~~~~~~~~~~~~kv~~~~ash~qpvls-ldyas~~~rGisgga~dkl~~~Sl~ 235 (323)
T KOG0322|consen 157 DKDHACGSTFLLLAGYESGHVVIWDLSTGDKIIQLPQSSKVESPNASHKQPVLS-LDYASSCDRGISGGADDKLVMYSLN 235 (323)
T ss_pred eccccccceEEEEEeccCCeEEEEEccCCceeeccccccccccchhhccCccee-eeechhhcCCcCCCccccceeeeec
Confidence 654 2 2 678888999999999999854443332 12333443 4555554555677777788888754
Q ss_pred cce--------eeeecccceEEEEEecCCEEEEEeCCCeEEEEecCCCeeeeeeccCCCcccCcceEEEEEeCC--eEEE
Q 008820 455 KFM--------KSMQTHKGSVFAVFLEGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQG--KLFV 524 (552)
Q Consensus 455 ~~~--------~~~~~h~~~v~~v~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~--~l~s 524 (552)
... ..++...-.-..+.+|++.++|+++|+.||+|+.++......+..+ .+.|++++|+++ .+++
T Consensus 236 ~s~gslq~~~e~~lknpGv~gvrIRpD~KIlATAGWD~RiRVyswrtl~pLAVLkyH-----sagvn~vAfspd~~lmAa 310 (323)
T KOG0322|consen 236 HSTGSLQIRKEITLKNPGVSGVRIRPDGKILATAGWDHRIRVYSWRTLNPLAVLKYH-----SAGVNAVAFSPDCELMAA 310 (323)
T ss_pred cccCcccccceEEecCCCccceEEccCCcEEeecccCCcEEEEEeccCCchhhhhhh-----hcceeEEEeCCCCchhhh
Confidence 221 1222222222345679999999999999999999987666555443 678999999976 4999
Q ss_pred EeCCCeEEEEEe
Q 008820 525 GCADRTVKIALC 536 (552)
Q Consensus 525 ~s~Dg~v~iw~~ 536 (552)
++.|++|.+|++
T Consensus 311 askD~rISLWkL 322 (323)
T KOG0322|consen 311 ASKDARISLWKL 322 (323)
T ss_pred ccCCceEEeeec
Confidence 999999999986
No 202
>KOG2110 consensus Uncharacterized conserved protein, contains WD40 repeats [Function unknown]
Probab=99.60 E-value=1.4e-12 Score=118.95 Aligned_cols=230 Identities=17% Similarity=0.164 Sum_probs=163.3
Q ss_pred CeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCC--cEEEEECCC
Q 008820 294 KVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDR--TIKAWSLLD 371 (552)
Q Consensus 294 ~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg--~i~iwd~~~ 371 (552)
.+..+.|.. +..+|..|+.||. ++++.+.-.. ..+.......+...-++..+++..+.+. .+++++++.
T Consensus 7 ti~~~~~Nq-d~~~lsvGs~~Gy-k~~~~~~~~k-------~~~~~~~~~~IvEmLFSSSLvaiV~~~qpr~Lkv~~~Kk 77 (391)
T KOG2110|consen 7 TINFIGFNQ-DSTLLSVGSKDGY-KIFSCSPFEK-------CFSKDTEGVSIVEMLFSSSLVAIVSIKQPRKLKVVHFKK 77 (391)
T ss_pred ceeeeeecc-ceeEEEccCCCce-eEEecCchHH-------hhcccCCCeEEEEeecccceeEEEecCCCceEEEEEccc
Confidence 445555654 3446666777664 6666553221 1111112223445555666666655544 489999988
Q ss_pred CceeEEecCCCCCeEEEEEeCCEEEEEeCCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCC--CCEEEEE--ECCCc
Q 008820 372 GTLSCTMSGHKSAVSTLAVCNGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAV--QHTLVVS--HESGS 447 (552)
Q Consensus 372 ~~~~~~~~~h~~~v~~l~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~--~~~l~~g--~~dg~ 447 (552)
+..+..+. ...+|.++.++.+.|+++-.+. |+|||+++.+.++++....+.. ..+++++++ +.+++-- ...|.
T Consensus 78 ~~~ICe~~-fpt~IL~VrmNr~RLvV~Lee~-IyIydI~~MklLhTI~t~~~n~-~gl~AlS~n~~n~ylAyp~s~t~Gd 154 (391)
T KOG2110|consen 78 KTTICEIF-FPTSILAVRMNRKRLVVCLEES-IYIYDIKDMKLLHTIETTPPNP-KGLCALSPNNANCYLAYPGSTTSGD 154 (391)
T ss_pred CceEEEEe-cCCceEEEEEccceEEEEEccc-EEEEecccceeehhhhccCCCc-cceEeeccCCCCceEEecCCCCCce
Confidence 88887776 5667999999877777776655 9999999999999987653222 223455554 4577753 34689
Q ss_pred EEEEeCCc--ceeeeecccceEEEEEe--cCCEEEEEeCCCe-EEEEecCCCeeeeeeccCCCcccCcceEEEEEeCC--
Q 008820 448 IKVWRNDK--FMKSMQTHKGSVFAVFL--EGKWLFTGGWDKT-VSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQG-- 520 (552)
Q Consensus 448 i~iwd~~~--~~~~~~~h~~~v~~v~~--~~~~l~sgs~dg~-i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~-- 520 (552)
|.+||..+ +...+..|.+++.+++| +|.+|||+|+.|+ |||+.+.+++....+..... ...|.+++|+++
T Consensus 155 V~l~d~~nl~~v~~I~aH~~~lAalafs~~G~llATASeKGTVIRVf~v~~G~kl~eFRRG~~---~~~IySL~Fs~ds~ 231 (391)
T KOG2110|consen 155 VVLFDTINLQPVNTINAHKGPLAALAFSPDGTLLATASEKGTVIRVFSVPEGQKLYEFRRGTY---PVSIYSLSFSPDSQ 231 (391)
T ss_pred EEEEEcccceeeeEEEecCCceeEEEECCCCCEEEEeccCceEEEEEEcCCccEeeeeeCCce---eeEEEEEEECCCCC
Confidence 99999654 67788899999999987 9999999999997 69999999988877766433 556999999964
Q ss_pred eEEEEeCCCeEEEEEecC
Q 008820 521 KLFVGCADRTVKIALCNR 538 (552)
Q Consensus 521 ~l~s~s~Dg~v~iw~~~~ 538 (552)
.|.+.|..++|+||+++.
T Consensus 232 ~L~~sS~TeTVHiFKL~~ 249 (391)
T KOG2110|consen 232 FLAASSNTETVHIFKLEK 249 (391)
T ss_pred eEEEecCCCeEEEEEecc
Confidence 477788899999999974
No 203
>KOG1523 consensus Actin-related protein Arp2/3 complex, subunit ARPC1/p41-ARC [Cytoskeleton]
Probab=99.58 E-value=5.4e-13 Score=119.40 Aligned_cols=231 Identities=18% Similarity=0.196 Sum_probs=165.0
Q ss_pred eecCccceEEEEEc--CCEEEEEeCCCcEEEEeCCCC---eEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeC
Q 008820 248 LQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDF---SHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSF 322 (552)
Q Consensus 248 l~~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~---~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~ 322 (552)
+.--..+|+|.+|+ ...+|.+.....|.||..... +..++++.|...|+.|.|.|..+ .+++|+.|..-++|..
T Consensus 6 ~~~~~~pitchAwn~drt~iAv~~~~~evhiy~~~~~~~w~~~htls~Hd~~vtgvdWap~sn-rIvtcs~drnayVw~~ 84 (361)
T KOG1523|consen 6 FHRLLEPITCHAWNSDRTQIAVSPNNHEVHIYSMLGADLWEPAHTLSEHDKIVTGVDWAPKSN-RIVTCSHDRNAYVWTQ 84 (361)
T ss_pred eeeccCceeeeeecCCCceEEeccCCceEEEEEecCCCCceeceehhhhCcceeEEeecCCCC-ceeEccCCCCcccccc
Confidence 33445799999999 788999999999999987654 56889999999999999999665 5699999999999998
Q ss_pred CCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCceeE----EecCCCCCeEEEEEe-CC-EEE
Q 008820 323 SFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSC----TMSGHKSAVSTLAVC-NG-VLY 396 (552)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~----~~~~h~~~v~~l~~~-~~-~l~ 396 (552)
..+..-++...+.... .......++|.++.|++|+.-..|.+|-++..+--. .-+.+.+.|+++.|+ ++ +++
T Consensus 85 ~~~~~WkptlvLlRiN--rAAt~V~WsP~enkFAVgSgar~isVcy~E~ENdWWVsKhikkPirStv~sldWhpnnVLla 162 (361)
T KOG1523|consen 85 PSGGTWKPTLVLLRIN--RAATCVKWSPKENKFAVGSGARLISVCYYEQENDWWVSKHIKKPIRSTVTSLDWHPNNVLLA 162 (361)
T ss_pred CCCCeeccceeEEEec--cceeeEeecCcCceEEeccCccEEEEEEEecccceehhhhhCCccccceeeeeccCCcceec
Confidence 5444333333222222 122345778889999999999999999886554322 224577889999999 55 889
Q ss_pred EEeCCCcEEEEECCC------------------CceeEEEecCCCCceEEEEEEcCCCCEEEEEECCCcEEEEeCCcc--
Q 008820 397 SGSRDGTIRLWSLSD------------------HSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDKF-- 456 (552)
Q Consensus 397 s~~~dg~i~iwd~~~------------------~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~~~-- 456 (552)
+|+.|+..|+|...- |+.+..+. ...+.+.. +.|+|+|+.|+-.+.|+.+.+-|...+
T Consensus 163 aGs~D~k~rVfSayIK~Vdekpap~pWgsk~PFG~lm~E~~-~~ggwvh~-v~fs~sG~~lawv~Hds~v~~~da~~p~~ 240 (361)
T KOG1523|consen 163 AGSTDGKCRVFSAYIKGVDEKPAPTPWGSKMPFGQLMSEAS-SSGGWVHG-VLFSPSGNRLAWVGHDSTVSFVDAAGPSE 240 (361)
T ss_pred ccccCcceeEEEEeeeccccCCCCCCCccCCcHHHHHHhhc-cCCCceee-eEeCCCCCEeeEecCCCceEEeecCCCch
Confidence 999999999997521 12222332 22344444 699999999999999999999985433
Q ss_pred -eeeeecccceEEEEEe-cCCEEEEEeCC
Q 008820 457 -MKSMQTHKGSVFAVFL-EGKWLFTGGWD 483 (552)
Q Consensus 457 -~~~~~~h~~~v~~v~~-~~~~l~sgs~d 483 (552)
........-+..++.| +...++.++.|
T Consensus 241 ~v~~~~~~~lP~ls~~~ise~~vv~ag~~ 269 (361)
T KOG1523|consen 241 RVQSVATAQLPLLSVSWISENSVVAAGYD 269 (361)
T ss_pred hccchhhccCCceeeEeecCCceeecCCC
Confidence 3333333356666666 55555555554
No 204
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.57 E-value=7.1e-16 Score=143.43 Aligned_cols=114 Identities=19% Similarity=0.217 Sum_probs=81.6
Q ss_pred hhhhhhhhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhh
Q 008820 8 RVTKSVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI 85 (552)
Q Consensus 8 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~llt 85 (552)
.++--+.|+. |||+.+...+ ....++|||-|||||++ ...+|+.|+|+||+|++||++++
T Consensus 148 ~~~~~~LKIADFGfAR~L~~~~---~a~tlcGSplYMAPEV~---------------~~~~YdAKADLWSiG~Ilyq~l~ 209 (429)
T KOG0595|consen 148 NDTSPVLKIADFGFARFLQPGS---MAETLCGSPLYMAPEVI---------------MSQQYDAKADLWSIGTILYQCLT 209 (429)
T ss_pred CCCCceEEecccchhhhCCchh---HHHHhhCCccccCHHHH---------------HhccccchhhHHHHHHHHHHHHh
Confidence 3333677887 8998888775 48999999999999999 45788999999999999999999
Q ss_pred CC-CchHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhh
Q 008820 86 GE-QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTN 157 (552)
Q Consensus 86 g~-pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~ 157 (552)
|+ ||+..+...|. .-++.-...++..+ .....++.+++...|+.+|.+|....+
T Consensus 210 g~~Pf~a~t~~eL~--------------~~~~k~~~~~~~~~----~~~s~~~~~Ll~~ll~~~~~~~~~~~~ 264 (429)
T KOG0595|consen 210 GKPPFDAETPKELL--------------LYIKKGNEIVPVLP----AELSNPLRELLISLLQRNPKDRISFED 264 (429)
T ss_pred CCCCccccCHHHHH--------------HHHhccccccCchh----hhccCchhhhhhHHHhcCccccCchHH
Confidence 99 99988777442 00000001111111 112334678888899999999876443
No 205
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.57 E-value=2.5e-15 Score=144.60 Aligned_cols=120 Identities=19% Similarity=0.329 Sum_probs=78.7
Q ss_pred cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHH-h-
Q 008820 18 CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKEL-I- 94 (552)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~-~- 94 (552)
|.|+.|.....-..--..+||+.|||||.+-..-.+ .+....+-+++.+|||||||||||+|+.|+ ||...- .
T Consensus 504 GIA~aI~~DTTsI~kdsQvGT~NYMsPEAl~~~~s~----~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n~~ 579 (677)
T KOG0596|consen 504 GIANAIQPDTTSIVKDSQVGTVNYMSPEALTDMSSS----RENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIINQI 579 (677)
T ss_pred chhcccCccccceeeccccCcccccCHHHHhhcccc----ccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHHHH
Confidence 778888888765566678999999999998442221 122223456889999999999999999999 996521 1
Q ss_pred hhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 95 DYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
..|..+...... -+.++.+. .-++.++...||+.||.+||+..++.+
T Consensus 580 aKl~aI~~P~~~-------------Iefp~~~~------~~~li~~mK~CL~rdPkkR~si~eLLq 626 (677)
T KOG0596|consen 580 AKLHAITDPNHE-------------IEFPDIPE------NDELIDVMKCCLARDPKKRWSIPELLQ 626 (677)
T ss_pred HHHHhhcCCCcc-------------ccccCCCC------chHHHHHHHHHHhcCcccCCCcHHHhc
Confidence 111111110000 00011111 112788999999999999999887655
No 206
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.56 E-value=3.2e-15 Score=132.38 Aligned_cols=99 Identities=17% Similarity=0.138 Sum_probs=65.3
Q ss_pred cccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhhhhhhccccCCCchhhhhhh
Q 008820 36 LESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDYIRCVSTKASDDNIACLGM 114 (552)
Q Consensus 36 ~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (552)
.||+.|||||++ . ...+++++|||||||+||||+||+ ||........ .
T Consensus 65 ~g~~~y~aPE~~------~---------~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~----------------~ 113 (176)
T smart00750 65 RVDPYFMAPEVI------Q---------GQSYTEKADIYSLGITLYEALDYELPYNEERELSA----------------I 113 (176)
T ss_pred CCcccccChHHh------c---------CCCCcchhhHHHHHHHHHHHHhCCCCccccchhcH----------------H
Confidence 699999999999 2 355678999999999999999999 9965321100 0
Q ss_pred hHHHHHHHHHH-Hh--hhhcCcc--ccHHHHHHhhcccCCCCCcchhhHHHHHHhh
Q 008820 115 YMAWMEKVTYL-LE--NKFGSEF--VSLQLMFCQCLNFDPGCRPLLTNVWKCIREL 165 (552)
Q Consensus 115 ~~~~~~~~~~~-~~--~~~~~~~--~~l~~~~~~~l~~~p~~R~~~~~~~~~l~~~ 165 (552)
...+....... +. ....... .++.+++.+||..+|.+||++.++.+.....
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~ 169 (176)
T smart00750 114 LEILLNGMPADDPRDRSNLESVSAARSFADFMRVCASRLPQRREAANHYLAHCRAL 169 (176)
T ss_pred HHHHHHHhccCCccccccHHHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHH
Confidence 00000000000 00 0000011 2488999999999999999999888876544
No 207
>KOG1445 consensus Tumor-specific antigen (contains WD repeats) [Cytoskeleton]
Probab=99.56 E-value=8.1e-14 Score=134.89 Aligned_cols=236 Identities=14% Similarity=0.152 Sum_probs=159.7
Q ss_pred EEEcCCEEEE--EeCCCcEEEEeCCCC-eEEE-EEe--CCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCccc
Q 008820 258 LAVGGGFLFS--SSFDKSIHVWSLKDF-SHVH-TFK--GHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPL 331 (552)
Q Consensus 258 l~~s~~~l~s--~s~dg~I~iwd~~~~-~~~~-~~~--~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~ 331 (552)
++.+..+++. ++.-|.|-||+++.. +... .+. .....|+++.|.|-+...|+.++.||.|++|.+..+......
T Consensus 587 fcan~~rvAVPL~g~gG~iai~el~~PGrLPDgv~p~l~Ngt~vtDl~WdPFD~~rLAVa~ddg~i~lWr~~a~gl~e~~ 666 (1012)
T KOG1445|consen 587 FCANNKRVAVPLAGSGGVIAIYELNEPGRLPDGVMPGLFNGTLVTDLHWDPFDDERLAVATDDGQINLWRLTANGLPENE 666 (1012)
T ss_pred eeeccceEEEEecCCCceEEEEEcCCCCCCCcccccccccCceeeecccCCCChHHeeecccCceEEEEEeccCCCCccc
Confidence 3333445544 455789999998753 2211 111 145679999999988889999999999999999876554443
Q ss_pred cccccCCCceeeeEEE--Eee-CCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe-CC-EEEEEeCCCcEEE
Q 008820 332 KKWNEEKDWRYSGIHA--LTT-SGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC-NG-VLYSGSRDGTIRL 406 (552)
Q Consensus 332 ~~~~~~~~~~~~~~~~--~~~-~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~-~~-~l~s~~~dg~i~i 406 (552)
......-..+...+.+ |+| ..+.|++++.|.+|++||+.+++....+.+|.+.|..++|+ ++ .+++.+.||+|++
T Consensus 667 ~tPe~~lt~h~eKI~slRfHPLAadvLa~asyd~Ti~lWDl~~~~~~~~l~gHtdqIf~~AWSpdGr~~AtVcKDg~~rV 746 (1012)
T KOG1445|consen 667 MTPEKILTIHGEKITSLRFHPLAADVLAVASYDSTIELWDLANAKLYSRLVGHTDQIFGIAWSPDGRRIATVCKDGTLRV 746 (1012)
T ss_pred CCcceeeecccceEEEEEecchhhhHhhhhhccceeeeeehhhhhhhheeccCcCceeEEEECCCCcceeeeecCceEEE
Confidence 3332222222223333 344 34589999999999999999999999999999999999999 44 9999999999999
Q ss_pred EECCCCce-eEEEecCCCCceEEEEEEcCCCCEEEEEECC----CcEEEEeCCcc----eeeeecccc---eEEEEEec-
Q 008820 407 WSLSDHSL-LTVLEEDSSGAVSSVLSLTAVQHTLVVSHES----GSIKVWRNDKF----MKSMQTHKG---SVFAVFLE- 473 (552)
Q Consensus 407 wd~~~~~~-~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~d----g~i~iwd~~~~----~~~~~~h~~---~v~~v~~~- 473 (552)
|+.++++. ++.-.+.. +.....+.|..+|+++++.+.| ..|.+||..+. +.+..-... -|....+|
T Consensus 747 y~Prs~e~pv~Eg~gpv-gtRgARi~wacdgr~viv~Gfdk~SeRQv~~Y~Aq~l~~~pl~t~~lDvaps~LvP~YD~Ds 825 (1012)
T KOG1445|consen 747 YEPRSREQPVYEGKGPV-GTRGARILWACDGRIVIVVGFDKSSERQVQMYDAQTLDLRPLYTQVLDVAPSPLVPHYDYDS 825 (1012)
T ss_pred eCCCCCCCccccCCCCc-cCcceeEEEEecCcEEEEecccccchhhhhhhhhhhccCCcceeeeecccCccccccccCCC
Confidence 99988753 33333332 2222335777889988877655 46788885432 222111111 11122233
Q ss_pred CCEEEEEeCCCeEEEEecCCC
Q 008820 474 GKWLFTGGWDKTVSVQELAGD 494 (552)
Q Consensus 474 ~~~l~sgs~dg~i~iwd~~~~ 494 (552)
+-.+++|-.|..|.+|.+-..
T Consensus 826 ~~lfltGKGD~~v~~yEv~~e 846 (1012)
T KOG1445|consen 826 NVLFLTGKGDRFVNMYEVIYE 846 (1012)
T ss_pred ceEEEecCCCceEEEEEecCC
Confidence 456778888999999998643
No 208
>KOG1310 consensus WD40 repeat protein [General function prediction only]
Probab=99.56 E-value=5.3e-14 Score=134.09 Aligned_cols=163 Identities=23% Similarity=0.392 Sum_probs=121.5
Q ss_pred EEeecCccceEEEEEc--CCEEEEEeCCCcEEEEeCCCCeEEEEE-eCCCCCeEEEEEecC-CCCEEEEEcCCCcEEEEe
Q 008820 246 KDLQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTF-KGHDHKVMAVVYVDE-DQPLCISGDSGGGIFVWS 321 (552)
Q Consensus 246 ~~l~~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~~~~~~~-~~h~~~v~~v~~~~~-~~~~l~s~~~dg~i~vwd 321 (552)
..|.||++.|+|++|+ |.+|++||.|-.+.|||.-..+.++.+ .+|...|.++.|.|. ++.++++|..|..|+++|
T Consensus 44 ~eL~GH~GCVN~LeWn~dG~lL~SGSDD~r~ivWd~~~~KllhsI~TgHtaNIFsvKFvP~tnnriv~sgAgDk~i~lfd 123 (758)
T KOG1310|consen 44 AELTGHTGCVNCLEWNADGELLASGSDDTRLIVWDPFEYKLLHSISTGHTANIFSVKFVPYTNNRIVLSGAGDKLIKLFD 123 (758)
T ss_pred hhhccccceecceeecCCCCEEeecCCcceEEeecchhcceeeeeecccccceeEEeeeccCCCeEEEeccCcceEEEEe
Confidence 3589999999999999 999999999999999999988888877 579999999999985 456789999999999999
Q ss_pred CCCCCCC-------ccccccccCCCceeeeEEEEeeCC-CEEEEeeCCCcEEEEECCCCce-eE---------EecCCCC
Q 008820 322 FSFPLGH-------EPLKKWNEEKDWRYSGIHALTTSG-RYLYTGSGDRTIKAWSLLDGTL-SC---------TMSGHKS 383 (552)
Q Consensus 322 ~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~-~~l~sgs~dg~i~iwd~~~~~~-~~---------~~~~h~~ 383 (552)
+...+.. .....+..+.. .... .+..|++ +.+.++++||+|+-+|++.... .. .+...--
T Consensus 124 l~~~~~~~~d~~~~~~~~~~~cht~-rVKr-ia~~p~~PhtfwsasEDGtirQyDiREph~c~p~~~~~~~l~ny~~~li 201 (758)
T KOG1310|consen 124 LDSSKEGGMDHGMEETTRCWSCHTD-RVKR-IATAPNGPHTFWSASEDGTIRQYDIREPHVCNPDEDCPSILVNYNPQLI 201 (758)
T ss_pred cccccccccccCccchhhhhhhhhh-hhhh-eecCCCCCceEEEecCCcceeeecccCCccCCccccccHHHHHhchhhh
Confidence 9853321 12222222222 1111 2344554 6999999999999999985311 11 1111223
Q ss_pred CeEEEEEe---CCEEEEEeCCCcEEEEECC
Q 008820 384 AVSTLAVC---NGVLYSGSRDGTIRLWSLS 410 (552)
Q Consensus 384 ~v~~l~~~---~~~l~s~~~dg~i~iwd~~ 410 (552)
...|+..+ +.+|++|+.|-..++||.+
T Consensus 202 elk~ltisp~rp~~laVGgsdpfarLYD~R 231 (758)
T KOG1310|consen 202 ELKCLTISPSRPYYLAVGGSDPFARLYDRR 231 (758)
T ss_pred eeeeeeecCCCCceEEecCCCchhhhhhhh
Confidence 45677777 4499999999999999954
No 209
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=99.55 E-value=1.5e-15 Score=145.93 Aligned_cols=90 Identities=23% Similarity=0.365 Sum_probs=65.3
Q ss_pred hhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhhhhhhccccCCCchhh
Q 008820 32 LSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDYIRCVSTKASDDNIA 110 (552)
Q Consensus 32 ~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~~~~~~~~~~~~~~~~ 110 (552)
.-.++|||.|||||++ .| ..++..||.||||||+||||+|. ||.++++. +
T Consensus 345 a~StVGTPDYiAPEVl------l~---------kgY~~~cDwWSLG~ImyEmLvGyPPF~s~tp~--------------~ 395 (550)
T KOG0605|consen 345 AYSTVGTPDYIAPEVL------LG---------KGYGKECDWWSLGCIMYEMLVGYPPFCSETPQ--------------E 395 (550)
T ss_pred hhcccCCccccchHHH------hc---------CCCCccccHHHHHHHHHHHHhCCCCCCCCCHH--------------H
Confidence 4458999999999999 33 44678999999999999999999 99887766 1
Q ss_pred hhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcc
Q 008820 111 CLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPL 154 (552)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~ 154 (552)
.|.....|+..... |. ......+..++|.+||. +|++|-.
T Consensus 396 T~rkI~nwr~~l~f-P~--~~~~s~eA~DLI~rll~-d~~~RLG 435 (550)
T KOG0605|consen 396 TYRKIVNWRETLKF-PE--EVDLSDEAKDLITRLLC-DPENRLG 435 (550)
T ss_pred HHHHHHHHhhhccC-CC--cCcccHHHHHHHHHHhc-CHHHhcC
Confidence 22222333332211 11 11233568999999999 9999987
No 210
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.55 E-value=1.5e-15 Score=146.14 Aligned_cols=110 Identities=15% Similarity=0.243 Sum_probs=85.9
Q ss_pred hcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchH
Q 008820 15 KVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTK 91 (552)
Q Consensus 15 ~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~ 91 (552)
|.| |+||.++..+. +.+.++|||.||.||++ +| -.+++|||||||||++|||++=+ +|.+
T Consensus 146 kLgDfGlaK~l~~~~~--~a~tvvGTp~YmcPEil------~d---------~pYn~KSDiWsLGC~~yEm~~lk~aF~a 208 (426)
T KOG0589|consen 146 KLGDFGLAKILNPEDS--LASTVVGTPYYMCPEIL------SD---------IPYNEKSDIWSLGCCLYEMCTLKPAFKA 208 (426)
T ss_pred eecchhhhhhcCCchh--hhheecCCCcccCHHHh------CC---------CCCCccCcchhhcchHHHHHhcccccCc
Confidence 888 99999999874 48999999999999999 44 66789999999999999999999 9998
Q ss_pred HHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHH
Q 008820 92 ELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKC 161 (552)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~ 161 (552)
.+...|. ....... ..+.......++..++..||.++|+.||++.++.+.
T Consensus 209 ~~m~~Li----------------~ki~~~~----~~Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 209 SNMSELI----------------LKINRGL----YSPLPSMYSSELRSLVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred cchHHHH----------------HHHhhcc----CCCCCccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence 7766432 0111111 111222345569999999999999999999887765
No 211
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.55 E-value=1.7e-15 Score=149.81 Aligned_cols=100 Identities=19% Similarity=0.181 Sum_probs=72.4
Q ss_pred cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhhh
Q 008820 18 CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDY 96 (552)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~~ 96 (552)
|++|.--..... +++|+|||.|||||++ ....|+..+|.|||||+|||||+|. ||.+++-..
T Consensus 513 GlcKe~m~~g~~--TsTfCGTpey~aPEil---------------~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee 575 (694)
T KOG0694|consen 513 GLCKEGMGQGDR--TSTFCGTPEFLAPEVL---------------TEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEE 575 (694)
T ss_pred ccccccCCCCCc--cccccCChhhcChhhh---------------ccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHH
Confidence 667554322222 8999999999999999 3477889999999999999999999 998866553
Q ss_pred hhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcch
Q 008820 97 IRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLL 155 (552)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~ 155 (552)
+ .+.+.......+.....+...++.++|.++|++|-.+
T Consensus 576 ~---------------------FdsI~~d~~~yP~~ls~ea~~il~~ll~k~p~kRLG~ 613 (694)
T KOG0694|consen 576 V---------------------FDSIVNDEVRYPRFLSKEAIAIMRRLLRKNPEKRLGS 613 (694)
T ss_pred H---------------------HHHHhcCCCCCCCcccHHHHHHHHHHhccCcccccCC
Confidence 3 1111111111222234457789999999999999876
No 212
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=99.55 E-value=1.4e-15 Score=133.73 Aligned_cols=120 Identities=16% Similarity=0.178 Sum_probs=89.7
Q ss_pred hhhhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-C
Q 008820 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (552)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-p 88 (552)
.=-|++ |||+++.+.+. +.+++|||+|+|||.+.=.++. ....++...|.||+||++|.||.|- |
T Consensus 160 ~~i~isDFGFa~~l~~Gek---LrelCGTPgYLAPEtikC~m~e---------~~pGYs~EVD~Wa~GVImyTLLaGcpP 227 (411)
T KOG0599|consen 160 MNIKISDFGFACQLEPGEK---LRELCGTPGYLAPETIKCSMYE---------NHPGYSKEVDEWACGVIMYTLLAGCPP 227 (411)
T ss_pred cceEEeccceeeccCCchh---HHHhcCCCcccChhheeeeccc---------CCCCccchhhHHHHHHHHHHHHcCCCc
Confidence 334555 99999999987 8999999999999999433332 2344567899999999999999999 9
Q ss_pred chHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 89 FTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 89 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
|-..-.. .+.+.+.+...+...+.+.....+.++++.+||+.||.+|.++.+...
T Consensus 228 FwHRkQm-----------------lMLR~ImeGkyqF~speWadis~~~KdLIsrlLqVdp~~Ritake~La 282 (411)
T KOG0599|consen 228 FWHRKQM-----------------LMLRMIMEGKYQFRSPEWADISATVKDLISRLLQVDPTKRITAKEALA 282 (411)
T ss_pred hhHHHHH-----------------HHHHHHHhcccccCCcchhhccccHHHHHHHHHeeCchhcccHHHHhc
Confidence 9653222 123334444444555566666777999999999999999999876544
No 213
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=99.55 E-value=2.3e-15 Score=145.12 Aligned_cols=103 Identities=19% Similarity=0.305 Sum_probs=75.2
Q ss_pred cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhhh
Q 008820 18 CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDY 96 (552)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~~ 96 (552)
|||+.+.... ...++++|||-|||||.. +| ..++..+|+|||||+||||.+|+ ||-.....+
T Consensus 145 g~Ar~m~~~t--~vltsikGtPlYmAPElv------~e---------~pyd~~sDlWslGcilYE~~~G~PPF~a~si~~ 207 (808)
T KOG0597|consen 145 GLARAMSTNT--SVLTSIKGTPLYMAPELV------EE---------QPYDHTSDLWSLGCILYELYVGQPPFYARSITQ 207 (808)
T ss_pred hhhhhcccCc--eeeeeccCcccccCHHHH------cC---------CCccchhhHHHHHHHHHHHhcCCCCchHHHHHH
Confidence 6777766654 579999999999999999 33 56778999999999999999999 998877664
Q ss_pred hhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhH
Q 008820 97 IRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNV 158 (552)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~ 158 (552)
|. +.+...+...+......+..++..+|.+||.+|.+-.++
T Consensus 208 Lv---------------------~~I~~d~v~~p~~~S~~f~nfl~gLL~kdP~~RltW~~L 248 (808)
T KOG0597|consen 208 LV---------------------KSILKDPVKPPSTASSSFVNFLQGLLIKDPAQRLTWTDL 248 (808)
T ss_pred HH---------------------HHHhcCCCCCcccccHHHHHHHHHHhhcChhhcccHHHH
Confidence 42 111111111111233348888999999999999886543
No 214
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL. Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.
Probab=99.55 E-value=2e-11 Score=122.09 Aligned_cols=280 Identities=13% Similarity=0.110 Sum_probs=179.7
Q ss_pred CCeEEEEEeecCccceEEEEEcCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEE
Q 008820 240 KGNVKFKDLQGHRDCVTGLAVGGGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFV 319 (552)
Q Consensus 240 ~~~~~~~~l~~H~~~V~~l~~s~~~l~s~s~dg~I~iwd~~~~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~v 319 (552)
.....+|.+.-...........++.++.++.|+.+..+|..+|+.+....... .+.+.-... ++ .++.++.+|.+..
T Consensus 83 ~tG~~~W~~~~~~~~~~~p~v~~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~-~~~~~p~v~-~~-~v~v~~~~g~l~a 159 (377)
T TIGR03300 83 ETGKRLWRVDLDERLSGGVGADGGLVFVGTEKGEVIALDAEDGKELWRAKLSS-EVLSPPLVA-NG-LVVVRTNDGRLTA 159 (377)
T ss_pred cCCcEeeeecCCCCcccceEEcCCEEEEEcCCCEEEEEECCCCcEeeeeccCc-eeecCCEEE-CC-EEEEECCCCeEEE
Confidence 33445676655544334455568888999999999999999999988765432 222211111 23 5667788999999
Q ss_pred EeCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCceeEEecCCCC-----------CeEEE
Q 008820 320 WSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKS-----------AVSTL 388 (552)
Q Consensus 320 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~-----------~v~~l 388 (552)
||.++++............. ..........+..++.+..+|.+..+|.++|+.+........ ...+.
T Consensus 160 ~d~~tG~~~W~~~~~~~~~~--~~~~~sp~~~~~~v~~~~~~g~v~ald~~tG~~~W~~~~~~~~g~~~~~~~~~~~~~p 237 (377)
T TIGR03300 160 LDAATGERLWTYSRVTPALT--LRGSASPVIADGGVLVGFAGGKLVALDLQTGQPLWEQRVALPKGRTELERLVDVDGDP 237 (377)
T ss_pred EEcCCCceeeEEccCCCcee--ecCCCCCEEECCEEEEECCCCEEEEEEccCCCEeeeeccccCCCCCchhhhhccCCcc
Confidence 99988765444332111100 000000011234678888899999999999988775431110 01122
Q ss_pred EEeCCEEEEEeCCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEECCCcEEEEeCCc--ceeeeecc-cc
Q 008820 389 AVCNGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDK--FMKSMQTH-KG 465 (552)
Q Consensus 389 ~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~~--~~~~~~~h-~~ 465 (552)
.+.++.++.++.+|.++.||..+++.+....... .. .....+..+++++.+|.++.+|..+ .+...... ..
T Consensus 238 ~~~~~~vy~~~~~g~l~a~d~~tG~~~W~~~~~~---~~---~p~~~~~~vyv~~~~G~l~~~d~~tG~~~W~~~~~~~~ 311 (377)
T TIGR03300 238 VVDGGQVYAVSYQGRVAALDLRSGRVLWKRDASS---YQ---GPAVDDNRLYVTDADGVVVALDRRSGSELWKNDELKYR 311 (377)
T ss_pred EEECCEEEEEEcCCEEEEEECCCCcEEEeeccCC---cc---CceEeCCEEEEECCCCeEEEEECCCCcEEEccccccCC
Confidence 3447789999999999999999999887665321 11 1223467888888999999999653 33222111 11
Q ss_pred eEEEEEecCCEEEEEeCCCeEEEEecCCCeeeeeeccCCCcccCcceEEEEEeCCeEEEEeCCCeEEEE
Q 008820 466 SVFAVFLEGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQGKLFVGCADRTVKIA 534 (552)
Q Consensus 466 ~v~~v~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~l~s~s~Dg~v~iw 534 (552)
...+....+..+++++.+|.|+++|..+++......... .....+..+.++.|+.++.||.|+.|
T Consensus 312 ~~ssp~i~g~~l~~~~~~G~l~~~d~~tG~~~~~~~~~~----~~~~~sp~~~~~~l~v~~~dG~l~~~ 376 (377)
T TIGR03300 312 QLTAPAVVGGYLVVGDFEGYLHWLSREDGSFVARLKTDG----SGIASPPVVVGDGLLVQTRDGDLYAF 376 (377)
T ss_pred ccccCEEECCEEEEEeCCCEEEEEECCCCCEEEEEEcCC----CccccCCEEECCEEEEEeCCceEEEe
Confidence 122223367899999999999999999888877655432 11233445567889999999999876
No 215
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL. Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.
Probab=99.54 E-value=2.6e-11 Score=121.23 Aligned_cols=275 Identities=13% Similarity=0.021 Sum_probs=180.5
Q ss_pred EEEcCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCccccccccC
Q 008820 258 LAVGGGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEE 337 (552)
Q Consensus 258 l~~s~~~l~s~s~dg~I~iwd~~~~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~ 337 (552)
....++.++.++.+|.|..+|..+|+.+............... ++ ..++.++.++.+..+|..+++..........
T Consensus 61 p~v~~~~v~v~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~p~v--~~-~~v~v~~~~g~l~ald~~tG~~~W~~~~~~~- 136 (377)
T TIGR03300 61 PAVAGGKVYAADADGTVVALDAETGKRLWRVDLDERLSGGVGA--DG-GLVFVGTEKGEVIALDAEDGKELWRAKLSSE- 136 (377)
T ss_pred eEEECCEEEEECCCCeEEEEEccCCcEeeeecCCCCcccceEE--cC-CEEEEEcCCCEEEEEECCCCcEeeeeccCce-
Confidence 3445889999999999999999999999887654432223332 23 3567888899999999987765443322110
Q ss_pred CCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCe-----EEEEEeCCEEEEEeCCCcEEEEECCCC
Q 008820 338 KDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAV-----STLAVCNGVLYSGSRDGTIRLWSLSDH 412 (552)
Q Consensus 338 ~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v-----~~l~~~~~~l~s~~~dg~i~iwd~~~~ 412 (552)
.. ......++.++.++.+|.++.||.++|+.+..+....... .+....++.++.+..++.+..+|.++|
T Consensus 137 ---~~---~~p~v~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~~~~~sp~~~~~~v~~~~~~g~v~ald~~tG 210 (377)
T TIGR03300 137 ---VL---SPPLVANGLVVVRTNDGRLTALDAATGERLWTYSRVTPALTLRGSASPVIADGGVLVGFAGGKLVALDLQTG 210 (377)
T ss_pred ---ee---cCCEEECCEEEEECCCCeEEEEEcCCCceeeEEccCCCceeecCCCCCEEECCEEEEECCCCEEEEEEccCC
Confidence 00 0111235577778889999999999999988876433221 122334678888999999999999999
Q ss_pred ceeEEEecCCCCc---------eEEEEEEcCCCCEEEEEECCCcEEEEeCCcceeeeecccceEEEEEecCCEEEEEeCC
Q 008820 413 SLLTVLEEDSSGA---------VSSVLSLTAVQHTLVVSHESGSIKVWRNDKFMKSMQTHKGSVFAVFLEGKWLFTGGWD 483 (552)
Q Consensus 413 ~~~~~~~~~~~~~---------~~~~~~~s~~~~~l~~g~~dg~i~iwd~~~~~~~~~~h~~~v~~v~~~~~~l~sgs~d 483 (552)
+.+.......... ......+ .+..+++++.+|.++.||..+....+............++..++.++.|
T Consensus 211 ~~~W~~~~~~~~g~~~~~~~~~~~~~p~~--~~~~vy~~~~~g~l~a~d~~tG~~~W~~~~~~~~~p~~~~~~vyv~~~~ 288 (377)
T TIGR03300 211 QPLWEQRVALPKGRTELERLVDVDGDPVV--DGGQVYAVSYQGRVAALDLRSGRVLWKRDASSYQGPAVDDNRLYVTDAD 288 (377)
T ss_pred CEeeeeccccCCCCCchhhhhccCCccEE--ECCEEEEEEcCCEEEEEECCCCcEEEeeccCCccCceEeCCEEEEECCC
Confidence 8876654321100 0000011 3567888889999999996543332222112222333477888888999
Q ss_pred CeEEEEecCCCeeeeeeccCCCcccCcceEEEEEeCCeEEEEeCCCeEEEEEecCCcceeEEEecc
Q 008820 484 KTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQGKLFVGCADRTVKIALCNRQIPEIFSLLLH 549 (552)
Q Consensus 484 g~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~l~s~s~Dg~v~iw~~~~~~~~~~~~~gh 549 (552)
|.++.+|..+++......... .....+....++.+++++.||.|+++|.. +++.+.++..+
T Consensus 289 G~l~~~d~~tG~~~W~~~~~~----~~~~ssp~i~g~~l~~~~~~G~l~~~d~~-tG~~~~~~~~~ 349 (377)
T TIGR03300 289 GVVVALDRRSGSELWKNDELK----YRQLTAPAVVGGYLVVGDFEGYLHWLSRE-DGSFVARLKTD 349 (377)
T ss_pred CeEEEEECCCCcEEEcccccc----CCccccCEEECCEEEEEeCCCEEEEEECC-CCCEEEEEEcC
Confidence 999999999887765542211 11223334457889999999999999976 56666666543
No 216
>KOG0290 consensus Conserved WD40 repeat-containing protein AN11 [Function unknown]
Probab=99.53 E-value=3.3e-13 Score=119.04 Aligned_cols=188 Identities=12% Similarity=0.190 Sum_probs=139.0
Q ss_pred cCccceEEEEEc---CCEEEEEeCCCcEEEEeCCCCeE---EEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCC
Q 008820 250 GHRDCVTGLAVG---GGFLFSSSFDKSIHVWSLKDFSH---VHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFS 323 (552)
Q Consensus 250 ~H~~~V~~l~~s---~~~l~s~s~dg~I~iwd~~~~~~---~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~ 323 (552)
.|..++++..|+ .+++.++|-|-+..|||++++.. ...+-.|..+|.+++|...+..++++.+.||.+|++|++
T Consensus 148 ~~~aPlTSFDWne~dp~~igtSSiDTTCTiWdie~~~~~~vkTQLIAHDKEV~DIaf~~~s~~~FASvgaDGSvRmFDLR 227 (364)
T KOG0290|consen 148 EFCAPLTSFDWNEVDPNLIGTSSIDTTCTIWDIETGVSGTVKTQLIAHDKEVYDIAFLKGSRDVFASVGADGSVRMFDLR 227 (364)
T ss_pred ccCCcccccccccCCcceeEeecccCeEEEEEEeeccccceeeEEEecCcceeEEEeccCccceEEEecCCCcEEEEEec
Confidence 466799999999 89999999999999999998633 455678999999999999888999999999999999998
Q ss_pred CCCCCccccccccCCCceeeeEEEEeeC---CCEEEEeeC-CCcEEEEECCC-CceeEEecCCCCCeEEEEEe---CCEE
Q 008820 324 FPLGHEPLKKWNEEKDWRYSGIHALTTS---GRYLYTGSG-DRTIKAWSLLD-GTLSCTMSGHKSAVSTLAVC---NGVL 395 (552)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~l~sgs~-dg~i~iwd~~~-~~~~~~~~~h~~~v~~l~~~---~~~l 395 (552)
.......+..-... ..++..++++ .+++++-.. ...|.+.|++. ..++..+++|.+.|+.++|. ...|
T Consensus 228 ~leHSTIIYE~p~~----~~pLlRLswnkqDpnymATf~~dS~~V~iLDiR~P~tpva~L~~H~a~VNgIaWaPhS~~hi 303 (364)
T KOG0290|consen 228 SLEHSTIIYEDPSP----STPLLRLSWNKQDPNYMATFAMDSNKVVILDIRVPCTPVARLRNHQASVNGIAWAPHSSSHI 303 (364)
T ss_pred ccccceEEecCCCC----CCcceeeccCcCCchHHhhhhcCCceEEEEEecCCCcceehhhcCcccccceEecCCCCcee
Confidence 65433333322221 2234444443 456666443 46799999985 46788999999999999998 3499
Q ss_pred EEEeCCCcEEEEECCCCc------eeEEEecCCCCceEEEEEEc-CCCCEEEEEEC
Q 008820 396 YSGSRDGTIRLWSLSDHS------LLTVLEEDSSGAVSSVLSLT-AVQHTLVVSHE 444 (552)
Q Consensus 396 ~s~~~dg~i~iwd~~~~~------~~~~~~~~~~~~~~~~~~~s-~~~~~l~~g~~ 444 (552)
.+++.|..+.+||+.+.- ++..+.. .+.+.. +.|+ ..+..++.+..
T Consensus 304 ctaGDD~qaliWDl~q~~~~~~~dPilay~a--~~EVNq-i~Ws~~~~Dwiai~~~ 356 (364)
T KOG0290|consen 304 CTAGDDCQALIWDLQQMPRENGEDPILAYTA--GGEVNQ-IQWSSSQPDWIAICFG 356 (364)
T ss_pred eecCCcceEEEEecccccccCCCCchhhhhc--cceeee-eeecccCCCEEEEEec
Confidence 999999999999997532 2222222 233444 4666 44567776654
No 217
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.53 E-value=5.5e-15 Score=144.42 Aligned_cols=104 Identities=23% Similarity=0.308 Sum_probs=76.4
Q ss_pred ccccccc-ccchhhhhhhccccccccchHHHHHHhhccCceeecccccc-cccccccccchhhhhhhhhhCC-CchHHHh
Q 008820 18 CVGSRIC-DKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEF-SVGYGSDVWPVACILLSLLIGE-QFTKELI 94 (552)
Q Consensus 18 ~~~~~~~-~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~-~~~~~sDv~SlG~~l~~lltg~-pf~~~~~ 94 (552)
|+|.... +.+ .+++++|||+|+|||++ .| .. ..+.++|||||||+||.|++|+ ||+..+.
T Consensus 166 G~s~~~~~~~~---~l~t~cGsp~Y~aPEvl------~~--------~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~ 228 (370)
T KOG0583|consen 166 GLSAISPGEDG---LLKTFCGSPAYAAPEVL------SG--------KGTYSGKAADVWSLGVILYVLLCGRLPFDDSNV 228 (370)
T ss_pred ccccccCCCCC---cccCCCCCcccCCHHHh------CC--------CCCcCCchhhhhhhHHHHHHHHhCCCCCCCccH
Confidence 7776663 333 58999999999999999 33 22 2358999999999999999999 9988665
Q ss_pred hhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCc-cccHHHHHHhhcccCCCCCcchhhHH
Q 008820 95 DYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSE-FVSLQLMFCQCLNFDPGCRPLLTNVW 159 (552)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~l~~~p~~R~~~~~~~ 159 (552)
..+ +..+.......|. .. .+++..++.+||..+|.+|++..++.
T Consensus 229 ~~l-----------------~~ki~~~~~~~p~----~~~S~~~~~Li~~mL~~~P~~R~t~~~i~ 273 (370)
T KOG0583|consen 229 PNL-----------------YRKIRKGEFKIPS----YLLSPEARSLIEKMLVPDPSTRITLLEIL 273 (370)
T ss_pred HHH-----------------HHHHhcCCccCCC----CcCCHHHHHHHHHHcCCCcccCCCHHHHh
Confidence 522 1222221122221 12 56799999999999999999998877
No 218
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.53 E-value=3.6e-15 Score=139.76 Aligned_cols=116 Identities=16% Similarity=0.240 Sum_probs=75.5
Q ss_pred hhhcc--cccccccc-cchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-C
Q 008820 13 VAKVG--CVGSRICD-KEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (552)
Q Consensus 13 ~~~~~--~~~~~~~~-~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-p 88 (552)
.+|+. |++++... .........+.|||.|||||++.. | ...++++|||||||+++||+||+ |
T Consensus 156 ~~KlaDFG~a~~~~~~~~~~~~~~~~~Gtp~~maPEvi~~-----g---------~~~~~~sDiWSlGCtVvEM~Tg~~P 221 (313)
T KOG0198|consen 156 DVKLADFGLAKKLESKGTKSDSELSVQGTPNYMAPEVIRN-----G---------EVARRESDIWSLGCTVVEMLTGKPP 221 (313)
T ss_pred eEEeccCccccccccccccccccccccCCccccCchhhcC-----C---------CcCCccchhhhcCCEEEeccCCCCc
Confidence 55665 55666663 111123667999999999999921 1 22336999999999999999999 9
Q ss_pred chHH-HhhhhhhccccCCCchhhhhhhhHHHHHH-HHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHH
Q 008820 89 FTKE-LIDYIRCVSTKASDDNIACLGMYMAWMEK-VTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCI 162 (552)
Q Consensus 89 f~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l 162 (552)
|... .... ......... .| ..+.....+.++++.+||.++|.+||++.+++...
T Consensus 222 W~~~~~~~~----------------~~~~ig~~~~~P----~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hp 277 (313)
T KOG0198|consen 222 WSEFFEEAE----------------ALLLIGREDSLP----EIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHP 277 (313)
T ss_pred chhhcchHH----------------HHHHHhccCCCC----CCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhCh
Confidence 9762 1110 000111111 11 11122444689999999999999999999877753
No 219
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.53 E-value=3.6e-15 Score=139.89 Aligned_cols=106 Identities=17% Similarity=0.289 Sum_probs=75.0
Q ss_pred cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhhh
Q 008820 18 CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDY 96 (552)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~~ 96 (552)
||+-.+..... ...+|+|||-|||||++ . ...++.|+||||||++.|||++|. |+..-...+
T Consensus 156 gVa~ql~~~~~--rr~tfvGTPfwMAPEVI------~---------~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmr 218 (467)
T KOG0201|consen 156 GVAGQLTNTVK--RRKTFVGTPFWMAPEVI------K---------QSGYDTKADIWSLGITAIELAKGEPPHSKLHPMR 218 (467)
T ss_pred ceeeeeechhh--ccccccccccccchhhh------c---------cccccchhhhhhhhHHHHHHhcCCCCCcccCcce
Confidence 66655554433 24789999999999999 2 245779999999999999999999 986644432
Q ss_pred hhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhc-CccccHHHHHHhhcccCCCCCcchhhHHHH
Q 008820 97 IRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFG-SEFVSLQLMFCQCLNFDPGCRPLLTNVWKC 161 (552)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~ 161 (552)
..++=.++ ..+..+ ...+.+++++..||.++|+.||++.++.+.
T Consensus 219 vlflIpk~---------------------~PP~L~~~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh 263 (467)
T KOG0201|consen 219 VLFLIPKS---------------------APPRLDGDFSPPFKEFVEACLDKNPEFRPSAKELLKH 263 (467)
T ss_pred EEEeccCC---------------------CCCccccccCHHHHHHHHHHhhcCcccCcCHHHHhhh
Confidence 21100111 111122 234459999999999999999999887664
No 220
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.52 E-value=3.4e-15 Score=144.66 Aligned_cols=110 Identities=15% Similarity=0.228 Sum_probs=79.8
Q ss_pred hhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cch
Q 008820 14 AKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFT 90 (552)
Q Consensus 14 ~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~ 90 (552)
-|++ ||+..+..... --+.++|||.|||||++ .+..+++|.||||||+|+.||+-|+ ||.
T Consensus 408 vKltDFGFcaqi~~~~~--KR~TmVGTPYWMAPEVv---------------trk~YG~KVDIWSLGIMaIEMveGEPPYl 470 (550)
T KOG0578|consen 408 VKLTDFGFCAQISEEQS--KRSTMVGTPYWMAPEVV---------------TRKPYGPKVDIWSLGIMAIEMVEGEPPYL 470 (550)
T ss_pred EEEeeeeeeeccccccC--ccccccCCCCccchhhh---------------hhcccCccccchhhhhHHHHHhcCCCCcc
Confidence 3566 77777666543 37899999999999999 3456789999999999999999999 996
Q ss_pred HHHhh-hh--hhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHH
Q 008820 91 KELID-YI--RCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKC 161 (552)
Q Consensus 91 ~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~ 161 (552)
.++.. +| +..++. + .........+++++++.+||+.||++|+++.++.+.
T Consensus 471 nE~PlrAlyLIa~ng~-------------------P--~lk~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~H 523 (550)
T KOG0578|consen 471 NENPLRALYLIATNGT-------------------P--KLKNPEKLSPELKDFLDRCLVVDVEQRASAKELLEH 523 (550)
T ss_pred CCChHHHHHHHhhcCC-------------------C--CcCCccccCHHHHHHHHHHhhcchhcCCCHHHHhcC
Confidence 54322 11 111110 0 111222345569999999999999999999887663
No 221
>KOG1009 consensus Chromatin assembly complex 1 subunit B/CAC2 (contains WD40 repeats) [Chromatin structure and dynamics; Replication, recombination and repair]
Probab=99.52 E-value=1.5e-12 Score=120.15 Aligned_cols=233 Identities=13% Similarity=0.221 Sum_probs=146.5
Q ss_pred CCccccceeeecCcc-eEEEeeCCCeEEEEE------------------eecCccceEEEEEc--CCEEEEEeCCCcEEE
Q 008820 218 DGADIDQARAAGGVK-DLVNGLSKGNVKFKD------------------LQGHRDCVTGLAVG--GGFLFSSSFDKSIHV 276 (552)
Q Consensus 218 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~------------------l~~H~~~V~~l~~s--~~~l~s~s~dg~I~i 276 (552)
+..++.++.+..... .++++..+..+++|. |..|..+|+++.|+ |+.|+||+.+|.|.+
T Consensus 12 ~~~pv~s~dfq~n~~~~laT~G~D~~iriW~v~r~~~~~~~~~V~y~s~Ls~H~~aVN~vRf~p~gelLASg~D~g~v~l 91 (434)
T KOG1009|consen 12 DHEPVYSVDFQKNSLNKLATAGGDKDIRIWKVNRSEPGGGDMKVEYLSSLSRHTRAVNVVRFSPDGELLASGGDGGEVFL 91 (434)
T ss_pred CCCceEEEEeccCcccceecccCccceeeeeeeecCCCCCceeEEEeecccCCcceeEEEEEcCCcCeeeecCCCceEEE
Confidence 334455555555444 666666666666665 56799999999999 889999999999999
Q ss_pred EeCC--------C--------CeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCcccccccc----
Q 008820 277 WSLK--------D--------FSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNE---- 336 (552)
Q Consensus 277 wd~~--------~--------~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~---- 336 (552)
|... + ....+.+.+|...|..++|+|++. ++++++.|..+++||+..+...........
T Consensus 92 Wk~~~~~~~~~d~e~~~~ke~w~v~k~lr~h~~diydL~Ws~d~~-~l~s~s~dns~~l~Dv~~G~l~~~~~dh~~yvqg 170 (434)
T KOG1009|consen 92 WKQGDVRIFDADTEADLNKEKWVVKKVLRGHRDDIYDLAWSPDSN-FLVSGSVDNSVRLWDVHAGQLLAILDDHEHYVQG 170 (434)
T ss_pred EEecCcCCccccchhhhCccceEEEEEecccccchhhhhccCCCc-eeeeeeccceEEEEEeccceeEeeccccccccce
Confidence 9765 2 234566788999999999999665 779999999999999986542211111000
Q ss_pred ---------------CC-C--------c--eeee------------------------------EEEEeeCCCEEEEeeC
Q 008820 337 ---------------EK-D--------W--RYSG------------------------------IHALTTSGRYLYTGSG 360 (552)
Q Consensus 337 ---------------~~-~--------~--~~~~------------------------------~~~~~~~~~~l~sgs~ 360 (552)
.. . . .... -.+|+|+|..+++.+.
T Consensus 171 vawDpl~qyv~s~s~dr~~~~~~~~~~~~~~~~~~~~m~~~~~~~~e~~s~rLfhDeTlksFFrRlsfTPdG~llvtPag 250 (434)
T KOG1009|consen 171 VAWDPLNQYVASKSSDRHPEGFSAKLKQVIKRHGLDIMPAKAFNEREGKSTRLFHDETLKSFFRRLSFTPDGSLLVTPAG 250 (434)
T ss_pred eecchhhhhhhhhccCcccceeeeeeeeeeeeeeeeEeeecccCCCCcceeeeeecCchhhhhhhcccCCCCcEEEcccc
Confidence 00 0 0 0000 0155666666665432
Q ss_pred ----CC-----cEEEEECC-CCceeEEecCCCCCeEEEEEe-------------------CCEEEEEeCCCcEEEEECCC
Q 008820 361 ----DR-----TIKAWSLL-DGTLSCTMSGHKSAVSTLAVC-------------------NGVLYSGSRDGTIRLWSLSD 411 (552)
Q Consensus 361 ----dg-----~i~iwd~~-~~~~~~~~~~h~~~v~~l~~~-------------------~~~l~s~~~dg~i~iwd~~~ 411 (552)
.+ ..++++-. ..++...+.+...++..+.++ -.+++.......+.+||.++
T Consensus 251 ~~~~g~~~~~n~tYvfsrk~l~rP~~~lp~~~k~~lavr~~pVy~elrp~~~~~~~~~lpyrlvfaiAt~~svyvydtq~ 330 (434)
T KOG1009|consen 251 LFKVGGGVFRNTSYVFSRKDLKRPAARLPSPKKPALAVRFSPVYYELRPLSSEKFLFVLPYRLVFAIATKNSVYVYDTQT 330 (434)
T ss_pred eeeeCCceeeceeEeeccccccCceeecCCCCcceEEEEeeeeEEEeccccccccccccccceEEEEeecceEEEecccc
Confidence 11 12333321 113333444444444444432 01233334456788999888
Q ss_pred CceeEEEecCCCCceEEEEEEcCCCCEEEEEECCCcEEEEe
Q 008820 412 HSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWR 452 (552)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd 452 (552)
..++.....-|-..++. ++|+++|..++..+.||.+.+..
T Consensus 331 ~~P~~~v~nihy~~iTD-iaws~dg~~l~vSS~DGyCS~vt 370 (434)
T KOG1009|consen 331 LEPLAVVDNIHYSAITD-IAWSDDGSVLLVSSTDGFCSLVT 370 (434)
T ss_pred ccceEEEeeeeeeeecc-eeecCCCcEEEEeccCCceEEEE
Confidence 87777776655555555 58899999999999998877654
No 222
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=99.52 E-value=1.2e-14 Score=140.68 Aligned_cols=119 Identities=17% Similarity=0.206 Sum_probs=82.6
Q ss_pred hhhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cc
Q 008820 13 VAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QF 89 (552)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf 89 (552)
..|+. |+++....... .++...||+.|||||++.+. ...++.|+||||||++|+||+||+ ||
T Consensus 182 ~~KI~DFGlsr~~~~~~~--~~~~~~GT~~wMAPEv~~~~-------------~~~~~~K~DvySFgIvlWEl~t~~~Pf 246 (362)
T KOG0192|consen 182 TLKIADFGLSREKVISKT--SMTSVAGTYRWMAPEVLRGE-------------KSPYTEKSDVYSFGIVLWELLTGEIPF 246 (362)
T ss_pred EEEECCCccceeeccccc--cccCCCCCccccChhhhcCC-------------CCcCCccchhhhHHHHHHHHHHCCCCC
Confidence 67787 55644444322 26679999999999999211 356889999999999999999999 99
Q ss_pred hHHHhhhhhhccccCCCchhhhhhhhHHHH-HHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHHhhh
Q 008820 90 TKELIDYIRCVSTKASDDNIACLGMYMAWM-EKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELI 166 (552)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~~~~ 166 (552)
......+++ ..... ...+.++. .....+..++.+|...+|.+||+..++...+..+.
T Consensus 247 ~~~~~~~~~----------------~~v~~~~~Rp~~p~----~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~ 304 (362)
T KOG0192|consen 247 EDLAPVQVA----------------SAVVVGGLRPPIPK----ECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIM 304 (362)
T ss_pred CCCCHHHHH----------------HHHHhcCCCCCCCc----cCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHH
Confidence 764433211 00000 00011111 13445889999999999999999999988887664
No 223
>KOG0771 consensus Prolactin regulatory element-binding protein/Protein transport protein SEC12p [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.52 E-value=3.5e-12 Score=118.53 Aligned_cols=189 Identities=19% Similarity=0.220 Sum_probs=142.0
Q ss_pred eEEEEeeCCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe-CC-EEEEEeCCCcEEEEECCCCceeEEEecC
Q 008820 344 GIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC-NG-VLYSGSRDGTIRLWSLSDHSLLTVLEED 421 (552)
Q Consensus 344 ~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~-~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~ 421 (552)
.+.+++.+|..+++|+.||++|+|+..+...+.....|...|.++.|+ ++ +|++-+.| ..+||+.+++..+......
T Consensus 148 k~vaf~~~gs~latgg~dg~lRv~~~Ps~~t~l~e~~~~~eV~DL~FS~dgk~lasig~d-~~~VW~~~~g~~~a~~t~~ 226 (398)
T KOG0771|consen 148 KVVAFNGDGSKLATGGTDGTLRVWEWPSMLTILEEIAHHAEVKDLDFSPDGKFLASIGAD-SARVWSVNTGAALARKTPF 226 (398)
T ss_pred eEEEEcCCCCEeeeccccceEEEEecCcchhhhhhHhhcCccccceeCCCCcEEEEecCC-ceEEEEeccCchhhhcCCc
Confidence 577899999999999999999999988888888888899999999999 55 89999999 9999999999777666533
Q ss_pred CCCceEEEEEEcCCC-----CEEEEEECCCcEEEEeCC-----c---ceeeeecccceEEEE--EecCCEEEEEeCCCeE
Q 008820 422 SSGAVSSVLSLTAVQ-----HTLVVSHESGSIKVWRND-----K---FMKSMQTHKGSVFAV--FLEGKWLFTGGWDKTV 486 (552)
Q Consensus 422 ~~~~~~~~~~~s~~~-----~~l~~g~~dg~i~iwd~~-----~---~~~~~~~h~~~v~~v--~~~~~~l~sgs~dg~i 486 (552)
........+.|+.++ +..+.-..-+.|+.||+. + ..+....+ ..|.++ +.+|++++.|+.||.|
T Consensus 227 ~k~~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~~~~~w~~~~~l~~~~~~~~~-~siSsl~VS~dGkf~AlGT~dGsV 305 (398)
T KOG0771|consen 227 SKDEMFSSCRFSVDNAQETLRLAASQFPGGGVRLCDISLWSGSNFLRLRKKIKRF-KSISSLAVSDDGKFLALGTMDGSV 305 (398)
T ss_pred ccchhhhhceecccCCCceEEEEEecCCCCceeEEEeeeeccccccchhhhhhcc-CcceeEEEcCCCcEEEEeccCCcE
Confidence 333344445777666 333333445667776632 1 11112222 345554 4599999999999999
Q ss_pred EEEecCCCeeeeeeccCCCcccCcceEEEEEeCC--eEEEEeCCCeEEEEEecC
Q 008820 487 SVQELAGDEFEEDVIPTGAIPCGSVITALLYWQG--KLFVGCADRTVKIALCNR 538 (552)
Q Consensus 487 ~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~--~l~s~s~Dg~v~iw~~~~ 538 (552)
-+++..+-+........ |...|+.+.|+|+ .+++.+.|....+..+..
T Consensus 306 ai~~~~~lq~~~~vk~a----H~~~VT~ltF~Pdsr~~~svSs~~~~~v~~l~v 355 (398)
T KOG0771|consen 306 AIYDAKSLQRLQYVKEA----HLGFVTGLTFSPDSRYLASVSSDNEAAVTKLAV 355 (398)
T ss_pred EEEEeceeeeeEeehhh----heeeeeeEEEcCCcCcccccccCCceeEEEEee
Confidence 99999876665554433 3668999999975 488899999999988874
No 224
>KOG0771 consensus Prolactin regulatory element-binding protein/Protein transport protein SEC12p [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.51 E-value=3.3e-13 Score=125.24 Aligned_cols=192 Identities=14% Similarity=0.164 Sum_probs=140.3
Q ss_pred EEEEEc--CCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCccccc
Q 008820 256 TGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKK 333 (552)
Q Consensus 256 ~~l~~s--~~~l~s~s~dg~I~iwd~~~~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~ 333 (552)
.+++|+ |..+++++.||++|||++.+...+.....|...|.++.|+|++. +|++-+.| ..+||+.+++........
T Consensus 148 k~vaf~~~gs~latgg~dg~lRv~~~Ps~~t~l~e~~~~~eV~DL~FS~dgk-~lasig~d-~~~VW~~~~g~~~a~~t~ 225 (398)
T KOG0771|consen 148 KVVAFNGDGSKLATGGTDGTLRVWEWPSMLTILEEIAHHAEVKDLDFSPDGK-FLASIGAD-SARVWSVNTGAALARKTP 225 (398)
T ss_pred eEEEEcCCCCEeeeccccceEEEEecCcchhhhhhHhhcCccccceeCCCCc-EEEEecCC-ceEEEEeccCchhhhcCC
Confidence 567777 89999999999999999988888888888999999999999776 67888888 999999998743322222
Q ss_pred cccCCCceeeeEEEEeeCC---C--EEEEeeCCCcEEEEECCCCce-----eEEecCCCCCeEEEEEe--CCEEEEEeCC
Q 008820 334 WNEEKDWRYSGIHALTTSG---R--YLYTGSGDRTIKAWSLLDGTL-----SCTMSGHKSAVSTLAVC--NGVLYSGSRD 401 (552)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~---~--~l~sgs~dg~i~iwd~~~~~~-----~~~~~~h~~~v~~l~~~--~~~l~s~~~d 401 (552)
.... .....+.|..++ . .++.-..-+.|+.||+...+- ..+.......|++++++ +++++.|+.|
T Consensus 226 ~~k~---~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~~~~~w~~~~~l~~~~~~~~~~siSsl~VS~dGkf~AlGT~d 302 (398)
T KOG0771|consen 226 FSKD---EMFSSCRFSVDNAQETLRLAASQFPGGGVRLCDISLWSGSNFLRLRKKIKRFKSISSLAVSDDGKFLALGTMD 302 (398)
T ss_pred cccc---hhhhhceecccCCCceEEEEEecCCCCceeEEEeeeeccccccchhhhhhccCcceeEEEcCCCcEEEEeccC
Confidence 1111 111122455554 2 223333445677766532111 11112233469999999 3499999999
Q ss_pred CcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEECCCcEEEEeC
Q 008820 402 GTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRN 453 (552)
Q Consensus 402 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~ 453 (552)
|.|-+++..+.+.++..+..|...++. +.|+|+.+++++-+.+....+..+
T Consensus 303 GsVai~~~~~lq~~~~vk~aH~~~VT~-ltF~Pdsr~~~svSs~~~~~v~~l 353 (398)
T KOG0771|consen 303 GSVAIYDAKSLQRLQYVKEAHLGFVTG-LTFSPDSRYLASVSSDNEAAVTKL 353 (398)
T ss_pred CcEEEEEeceeeeeEeehhhheeeeee-EEEcCCcCcccccccCCceeEEEE
Confidence 999999999999998888887776666 699999999999888888888753
No 225
>KOG2111 consensus Uncharacterized conserved protein, contains WD40 repeats [Function unknown]
Probab=99.50 E-value=2.4e-11 Score=108.92 Aligned_cols=233 Identities=14% Similarity=0.185 Sum_probs=158.6
Q ss_pred CeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCccccccccCCCceeeeEEEEeeCCCEE-EEeeCC------CcEEE
Q 008820 294 KVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYL-YTGSGD------RTIKA 366 (552)
Q Consensus 294 ~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~sgs~d------g~i~i 366 (552)
...+++|+.+.. - .++..|.-.++|+.+--+.....+..... ..+..+-...+++ ++|+.+ +.|.|
T Consensus 7 ~~lsvs~NQD~S-c-Fava~~~Gfriyn~~P~ke~~~r~~~~~G-----~~~veMLfR~N~laLVGGg~~pky~pNkviI 79 (346)
T KOG2111|consen 7 KTLSVSFNQDHS-C-FAVATDTGFRIYNCDPFKESASRQFIDGG-----FKIVEMLFRSNYLALVGGGSRPKYPPNKVII 79 (346)
T ss_pred ceeEEEEccCCc-e-EEEEecCceEEEecCchhhhhhhccccCc-----hhhhhHhhhhceEEEecCCCCCCCCCceEEE
Confidence 345588876554 3 44555677899998742221111111111 1112222333433 344433 47999
Q ss_pred EECCCCceeEEecCCCCCeEEEEEeCCEEEEEeCCCcEEEEECC-CCceeEEEecCCCCceEEEEEEcCC--CCEEEE-E
Q 008820 367 WSLLDGTLSCTMSGHKSAVSTLAVCNGVLYSGSRDGTIRLWSLS-DHSLLTVLEEDSSGAVSSVLSLTAV--QHTLVV-S 442 (552)
Q Consensus 367 wd~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~~s~~--~~~l~~-g 442 (552)
||=...+++.++. ...+|.++.+..+.+++.- .+.|++|... +.+.++.+.......-. ++..|. ..+|+. |
T Consensus 80 WDD~k~~~i~el~-f~~~I~~V~l~r~riVvvl-~~~I~VytF~~n~k~l~~~et~~NPkGl--C~~~~~~~k~~LafPg 155 (346)
T KOG2111|consen 80 WDDLKERCIIELS-FNSEIKAVKLRRDRIVVVL-ENKIYVYTFPDNPKLLHVIETRSNPKGL--CSLCPTSNKSLLAFPG 155 (346)
T ss_pred EecccCcEEEEEE-eccceeeEEEcCCeEEEEe-cCeEEEEEcCCChhheeeeecccCCCce--EeecCCCCceEEEcCC
Confidence 9977777887776 6788999999977777664 5789999997 56667766654322222 344443 333443 4
Q ss_pred ECCCcEEEEeCCc----ceeeeecccceEEEEEe--cCCEEEEEeCCCe-EEEEecCCCeeeeeeccCCCcccCcceEEE
Q 008820 443 HESGSIKVWRNDK----FMKSMQTHKGSVFAVFL--EGKWLFTGGWDKT-VSVQELAGDEFEEDVIPTGAIPCGSVITAL 515 (552)
Q Consensus 443 ~~dg~i~iwd~~~----~~~~~~~h~~~v~~v~~--~~~~l~sgs~dg~-i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l 515 (552)
-.-|.|.|-|+.. ....+..|.+.|.|++. +|..+||+|..|+ |||||..+++....+..... .+.|.++
T Consensus 156 ~k~GqvQi~dL~~~~~~~p~~I~AH~s~Iacv~Ln~~Gt~vATaStkGTLIRIFdt~~g~~l~E~RRG~d---~A~iy~i 232 (346)
T KOG2111|consen 156 FKTGQVQIVDLASTKPNAPSIINAHDSDIACVALNLQGTLVATASTKGTLIRIFDTEDGTLLQELRRGVD---RADIYCI 232 (346)
T ss_pred CccceEEEEEhhhcCcCCceEEEcccCceeEEEEcCCccEEEEeccCcEEEEEEEcCCCcEeeeeecCCc---hheEEEE
Confidence 4579999999653 24678899999999987 8999999999997 79999999988888766544 6779999
Q ss_pred EEeCC--eEEEEeCCCeEEEEEecCCc
Q 008820 516 LYWQG--KLFVGCADRTVKIALCNRQI 540 (552)
Q Consensus 516 ~~~~~--~l~s~s~Dg~v~iw~~~~~~ 540 (552)
+|+++ .|+++|..|+|+|+.+..+.
T Consensus 233 aFSp~~s~LavsSdKgTlHiF~l~~~~ 259 (346)
T KOG2111|consen 233 AFSPNSSWLAVSSDKGTLHIFSLRDTE 259 (346)
T ss_pred EeCCCccEEEEEcCCCeEEEEEeecCC
Confidence 99975 48889999999999997543
No 226
>PHA02988 hypothetical protein; Provisional
Probab=99.50 E-value=1e-14 Score=139.61 Aligned_cols=100 Identities=14% Similarity=0.151 Sum_probs=69.9
Q ss_pred hccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhhhhhhccccCCCchhhhh
Q 008820 34 DFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDYIRCVSTKASDDNIACL 112 (552)
Q Consensus 34 ~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~~~~~~~~~~~~~~~~~~ 112 (552)
...||+.|||||++.+ ....++.++|||||||++|||++|+ ||...+...+.
T Consensus 179 ~~~~~~~y~aPE~~~~-------------~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~-------------- 231 (283)
T PHA02988 179 KNVNFMVYFSYKMLND-------------IFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIY-------------- 231 (283)
T ss_pred cccCcccccCHHHhhh-------------ccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHHH--------------
Confidence 4579999999999822 1145678999999999999999999 99764433111
Q ss_pred hhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHHhh
Q 008820 113 GMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIREL 165 (552)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~~~ 165 (552)
........ ...........+.+++.+||+.+|.+||++.++.+.+..+
T Consensus 232 ---~~i~~~~~--~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~ 279 (283)
T PHA02988 232 ---DLIINKNN--SLKLPLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLY 279 (283)
T ss_pred ---HHHHhcCC--CCCCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHH
Confidence 00000000 0000112344599999999999999999999999887764
No 227
>KOG1334 consensus WD40 repeat protein [General function prediction only]
Probab=99.49 E-value=6e-13 Score=125.41 Aligned_cols=284 Identities=14% Similarity=0.128 Sum_probs=206.7
Q ss_pred hhcCCCCCCCccccceeeecCcceEEEeeCCCeEEEEEe----------ecCccceEEEEEc----CCEEEEEeCCCcEE
Q 008820 210 ELLGAENSDGADIDQARAAGGVKDLVNGLSKGNVKFKDL----------QGHRDCVTGLAVG----GGFLFSSSFDKSIH 275 (552)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l----------~~H~~~V~~l~~s----~~~l~s~s~dg~I~ 275 (552)
.+....+.+...++.+.+...+..+++++.+..+.+|+. .||...|..-.|- .+.+++++.||.|+
T Consensus 133 ~l~~kL~~H~GcVntV~FN~~Gd~l~SgSDD~~vv~WdW~~~~~~l~f~SGH~~NvfQaKFiP~s~d~ti~~~s~dgqvr 212 (559)
T KOG1334|consen 133 RLQKKLNKHKGCVNTVHFNQRGDVLASGSDDLQVVVWDWVSGSPKLSFESGHCNNVFQAKFIPFSGDRTIVTSSRDGQVR 212 (559)
T ss_pred hhhhcccCCCCccceeeecccCceeeccCccceEEeehhhccCcccccccccccchhhhhccCCCCCcCceeccccCcee
Confidence 344445566667888888899999999999999998873 5788888777664 78899999999999
Q ss_pred EEeCCC-CeE--EEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCccccccccCCCceeeeEE--EEee
Q 008820 276 VWSLKD-FSH--VHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIH--ALTT 350 (552)
Q Consensus 276 iwd~~~-~~~--~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 350 (552)
+=.+.. +.+ ...+..|.++|..++.-|....-|.+++.|+.+.-+|++.......+........ ...... ++.|
T Consensus 213 ~s~i~~t~~~e~t~rl~~h~g~vhklav~p~sp~~f~S~geD~~v~~~Dlr~~~pa~~~~cr~~~~~-~~v~L~~Ia~~P 291 (559)
T KOG1334|consen 213 VSEILETGYVENTKRLAPHEGPVHKLAVEPDSPKPFLSCGEDAVVFHIDLRQDVPAEKFVCREADEK-ERVGLYTIAVDP 291 (559)
T ss_pred eeeeccccceecceecccccCccceeeecCCCCCcccccccccceeeeeeccCCccceeeeeccCCc-cceeeeeEecCC
Confidence 877643 333 2445679999999999999999999999999999999987655444432222221 112222 4444
Q ss_pred CC-CEEEEeeCCCcEEEEECCCCc------eeEEec------CCCCCeEEEEEe--CCEEEEEeCCCcEEEEECCC--C-
Q 008820 351 SG-RYLYTGSGDRTIKAWSLLDGT------LSCTMS------GHKSAVSTLAVC--NGVLYSGSRDGTIRLWSLSD--H- 412 (552)
Q Consensus 351 ~~-~~l~sgs~dg~i~iwd~~~~~------~~~~~~------~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~--~- 412 (552)
.. ..+++|+.|..+++||.+.-. .+.++- ...-.|+|++|+ ++-++++..|-.|+++.-.- |
T Consensus 292 ~nt~~faVgG~dqf~RvYD~R~~~~e~~n~~~~~f~p~hl~~d~~v~ITgl~Ysh~~sElLaSYnDe~IYLF~~~~~~G~ 371 (559)
T KOG1334|consen 292 RNTNEFAVGGSDQFARVYDQRRIDKEENNGVLDKFCPHHLVEDDPVNITGLVYSHDGSELLASYNDEDIYLFNKSMGDGS 371 (559)
T ss_pred CCccccccCChhhhhhhhcccchhhccccchhhhcCCccccccCcccceeEEecCCccceeeeecccceEEeccccccCC
Confidence 43 389999999999999986432 122322 223468999999 44777788888999995432 2
Q ss_pred ---------ceeEE-EecCCC-CceEEEEEEcCCCCEEEEEECCCcEEEEeC--CcceeeeecccceEEEEEe--cCCEE
Q 008820 413 ---------SLLTV-LEEDSS-GAVSSVLSLTAVQHTLVVSHESGSIKVWRN--DKFMKSMQTHKGSVFAVFL--EGKWL 477 (552)
Q Consensus 413 ---------~~~~~-~~~~~~-~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~--~~~~~~~~~h~~~v~~v~~--~~~~l 477 (552)
..+.. +++|.. ..+..+-.|.|...++++|+.-|.|.||+- .+.++.+++...-|+|+.+ ---.|
T Consensus 372 ~p~~~s~~~~~~k~vYKGHrN~~TVKgVNFfGPrsEyVvSGSDCGhIFiW~K~t~eii~~MegDr~VVNCLEpHP~~PvL 451 (559)
T KOG1334|consen 372 EPDPSSPREQYVKRVYKGHRNSRTVKGVNFFGPRSEYVVSGSDCGHIFIWDKKTGEIIRFMEGDRHVVNCLEPHPHLPVL 451 (559)
T ss_pred CCCCCcchhhccchhhcccccccccceeeeccCccceEEecCccceEEEEecchhHHHHHhhcccceEeccCCCCCCchh
Confidence 12222 555532 234455678899999999999999999994 4567777877778999987 56689
Q ss_pred EEEeCCCeEEEEecCCC
Q 008820 478 FTGGWDKTVSVQELAGD 494 (552)
Q Consensus 478 ~sgs~dg~i~iwd~~~~ 494 (552)
|+++-|..|+||...+.
T Consensus 452 AsSGid~DVKIWTP~~~ 468 (559)
T KOG1334|consen 452 ASSGIDHDVKIWTPLTA 468 (559)
T ss_pred hccCCccceeeecCCcc
Confidence 99999999999987443
No 228
>PRK11028 6-phosphogluconolactonase; Provisional
Probab=99.48 E-value=2.3e-10 Score=112.15 Aligned_cols=237 Identities=14% Similarity=0.156 Sum_probs=147.7
Q ss_pred CccceEEEEEc--CCEEEEEe-CCCcEEEEeCC-CCeE--EEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCC
Q 008820 251 HRDCVTGLAVG--GGFLFSSS-FDKSIHVWSLK-DFSH--VHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSF 324 (552)
Q Consensus 251 H~~~V~~l~~s--~~~l~s~s-~dg~I~iwd~~-~~~~--~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~ 324 (552)
+.+....++++ +++|+.++ .++.|.+|+++ +++. +.... ..+....++++|+++.++++...++.|.+|+++.
T Consensus 33 ~~~~~~~l~~spd~~~lyv~~~~~~~i~~~~~~~~g~l~~~~~~~-~~~~p~~i~~~~~g~~l~v~~~~~~~v~v~~~~~ 111 (330)
T PRK11028 33 VPGQVQPMVISPDKRHLYVGVRPEFRVLSYRIADDGALTFAAESP-LPGSPTHISTDHQGRFLFSASYNANCVSVSPLDK 111 (330)
T ss_pred cCCCCccEEECCCCCEEEEEECCCCcEEEEEECCCCceEEeeeec-CCCCceEEEECCCCCEEEEEEcCCCeEEEEEECC
Confidence 34556778888 77776654 58889999986 3432 22222 3345678999998887766666799999999974
Q ss_pred CCCC-ccccccccCCCceeeeEEEEeeCCCEEEE-eeCCCcEEEEECCCCceeE-------EecCCCCCeEEEEEe-C-C
Q 008820 325 PLGH-EPLKKWNEEKDWRYSGIHALTTSGRYLYT-GSGDRTIKAWSLLDGTLSC-------TMSGHKSAVSTLAVC-N-G 393 (552)
Q Consensus 325 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~s-gs~dg~i~iwd~~~~~~~~-------~~~~h~~~v~~l~~~-~-~ 393 (552)
.... .......... .. ....++|+++++++ ...++.|.+||+++...+. ... .......+.|+ + .
T Consensus 112 ~g~~~~~~~~~~~~~--~~-~~~~~~p~g~~l~v~~~~~~~v~v~d~~~~g~l~~~~~~~~~~~-~g~~p~~~~~~pdg~ 187 (330)
T PRK11028 112 DGIPVAPIQIIEGLE--GC-HSANIDPDNRTLWVPCLKEDRIRLFTLSDDGHLVAQEPAEVTTV-EGAGPRHMVFHPNQQ 187 (330)
T ss_pred CCCCCCceeeccCCC--cc-cEeEeCCCCCEEEEeeCCCCEEEEEEECCCCcccccCCCceecC-CCCCCceEEECCCCC
Confidence 3211 1222111111 11 12467899987754 5567999999997633221 111 12345678998 3 3
Q ss_pred EEEEEeC-CCcEEEEECCC--Cc--eeEEEecCCC---C-ceEEEEEEcCCCCEEEEEEC-CCcEEEEeCCc--ceeeee
Q 008820 394 VLYSGSR-DGTIRLWSLSD--HS--LLTVLEEDSS---G-AVSSVLSLTAVQHTLVVSHE-SGSIKVWRNDK--FMKSMQ 461 (552)
Q Consensus 394 ~l~s~~~-dg~i~iwd~~~--~~--~~~~~~~~~~---~-~~~~~~~~s~~~~~l~~g~~-dg~i~iwd~~~--~~~~~~ 461 (552)
+++++.. +++|.+||+.. ++ .+..+..... + .....+.++|++++++++.. ++.|.+|+... ....+.
T Consensus 188 ~lyv~~~~~~~v~v~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~i~~~pdg~~lyv~~~~~~~I~v~~i~~~~~~~~~~ 267 (330)
T PRK11028 188 YAYCVNELNSSVDVWQLKDPHGEIECVQTLDMMPADFSDTRWAADIHITPDGRHLYACDRTASLISVFSVSEDGSVLSFE 267 (330)
T ss_pred EEEEEecCCCEEEEEEEeCCCCCEEEEEEEecCCCcCCCCccceeEEECCCCCEEEEecCCCCeEEEEEEeCCCCeEEEe
Confidence 7766665 99999999973 33 2333322110 1 11122678999999999864 78999998632 122222
Q ss_pred ccc-----ceEEEEEecCCEEEEEeC-CCeEEEEecC
Q 008820 462 THK-----GSVFAVFLEGKWLFTGGW-DKTVSVQELA 492 (552)
Q Consensus 462 ~h~-----~~v~~v~~~~~~l~sgs~-dg~i~iwd~~ 492 (552)
++. ..-..++++|++|+++.. +++|.+|+++
T Consensus 268 ~~~~~~~~p~~~~~~~dg~~l~va~~~~~~v~v~~~~ 304 (330)
T PRK11028 268 GHQPTETQPRGFNIDHSGKYLIAAGQKSHHISVYEID 304 (330)
T ss_pred EEEeccccCCceEECCCCCEEEEEEccCCcEEEEEEc
Confidence 221 122345569999998775 8999999875
No 229
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.48 E-value=2.3e-14 Score=135.65 Aligned_cols=100 Identities=22% Similarity=0.260 Sum_probs=71.9
Q ss_pred hhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhhhhhhccccCCCch
Q 008820 30 LFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDYIRCVSTKASDDN 108 (552)
Q Consensus 30 ~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~~~~~~~~~~~~~~ 108 (552)
..++..+|||+|||||.+.+. ......+.+-|||||||+||.||.|+ ||-++....+
T Consensus 270 ~~L~~tvGTPAF~APE~c~~~-----------~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~~l----------- 327 (576)
T KOG0585|consen 270 DQLSRTVGTPAFFAPELCSGG-----------NSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFELEL----------- 327 (576)
T ss_pred HHHhhcCCCccccchHhhcCC-----------CCccccchhhhhhhhhhhHHHhhhccCCcccchHHHH-----------
Confidence 358889999999999999321 11345567899999999999999999 9988665422
Q ss_pred hhhhhhhHHHHHHHHHHHhh--hhcCccccHHHHHHhhcccCCCCCcchhhHHHH
Q 008820 109 IACLGMYMAWMEKVTYLLEN--KFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKC 161 (552)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~ 161 (552)
+.++...+.. ..+.....++++|.++|++||++|.+..++...
T Consensus 328 ----------~~KIvn~pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~H 372 (576)
T KOG0585|consen 328 ----------FDKIVNDPLEFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLH 372 (576)
T ss_pred ----------HHHHhcCcccCCCcccccHHHHHHHHHHhhcChhheeehhhheec
Confidence 2222222211 111234569999999999999999998776553
No 230
>KOG2111 consensus Uncharacterized conserved protein, contains WD40 repeats [Function unknown]
Probab=99.47 E-value=6.6e-11 Score=106.19 Aligned_cols=176 Identities=17% Similarity=0.268 Sum_probs=134.2
Q ss_pred CcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCC-CCCCCccccccccCCCceeeeEEEEee
Q 008820 272 KSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFS-FPLGHEPLKKWNEEKDWRYSGIHALTT 350 (552)
Q Consensus 272 g~I~iwd~~~~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (552)
..|.|||=...+++.++. ...+|.+|.+.++ .++ .-..+.|.+|.+. ..+....+.+....+ +++++.+
T Consensus 75 NkviIWDD~k~~~i~el~-f~~~I~~V~l~r~---riV-vvl~~~I~VytF~~n~k~l~~~et~~NPk-----GlC~~~~ 144 (346)
T KOG2111|consen 75 NKVIIWDDLKERCIIELS-FNSEIKAVKLRRD---RIV-VVLENKIYVYTFPDNPKLLHVIETRSNPK-----GLCSLCP 144 (346)
T ss_pred ceEEEEecccCcEEEEEE-eccceeeEEEcCC---eEE-EEecCeEEEEEcCCChhheeeeecccCCC-----ceEeecC
Confidence 469999966677777776 6789999999764 223 3356899999987 334344444433332 2556666
Q ss_pred CCC--EEEE-eeCCCcEEEEECCCCce--eEEecCCCCCeEEEEEe-C-CEEEEEeCCCc-EEEEECCCCceeEEEecCC
Q 008820 351 SGR--YLYT-GSGDRTIKAWSLLDGTL--SCTMSGHKSAVSTLAVC-N-GVLYSGSRDGT-IRLWSLSDHSLLTVLEEDS 422 (552)
Q Consensus 351 ~~~--~l~s-gs~dg~i~iwd~~~~~~--~~~~~~h~~~v~~l~~~-~-~~l~s~~~dg~-i~iwd~~~~~~~~~~~~~~ 422 (552)
..+ +|+. |-.-|.|.+-|+...+. ...+.+|.+.|.|++.+ + .++||+|..|+ |||||..+|+.+..++...
T Consensus 145 ~~~k~~LafPg~k~GqvQi~dL~~~~~~~p~~I~AH~s~Iacv~Ln~~Gt~vATaStkGTLIRIFdt~~g~~l~E~RRG~ 224 (346)
T KOG2111|consen 145 TSNKSLLAFPGFKTGQVQIVDLASTKPNAPSIINAHDSDIACVALNLQGTLVATASTKGTLIRIFDTEDGTLLQELRRGV 224 (346)
T ss_pred CCCceEEEcCCCccceEEEEEhhhcCcCCceEEEcccCceeEEEEcCCccEEEEeccCcEEEEEEEcCCCcEeeeeecCC
Confidence 533 4443 45669999999976655 46788999999999999 4 49999999997 7999999999999998776
Q ss_pred CCceEEEEEEcCCCCEEEEEECCCcEEEEeCCcce
Q 008820 423 SGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDKFM 457 (552)
Q Consensus 423 ~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~~~~ 457 (552)
......+++|||+..+|++++..|++.|+.++...
T Consensus 225 d~A~iy~iaFSp~~s~LavsSdKgTlHiF~l~~~~ 259 (346)
T KOG2111|consen 225 DRADIYCIAFSPNSSWLAVSSDKGTLHIFSLRDTE 259 (346)
T ss_pred chheEEEEEeCCCccEEEEEcCCCeEEEEEeecCC
Confidence 66666678999999999999999999999876533
No 231
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.47 E-value=2.8e-14 Score=140.42 Aligned_cols=96 Identities=26% Similarity=0.358 Sum_probs=72.9
Q ss_pred hhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhhhhhhccccCCCchh
Q 008820 31 FLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDYIRCVSTKASDDNI 109 (552)
Q Consensus 31 ~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~~~~~~~~~~~~~~~ 109 (552)
.+-+-+|+|.|.|||++ .| .-.-+.++||||.|||||.||||+ ||+.++...|.
T Consensus 167 lLeTSCGSPHYA~PEIV------~G--------~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~LL----------- 221 (786)
T KOG0588|consen 167 LLETSCGSPHYAAPEIV------SG--------RPYDGRPSDVWSCGVILFALLTGKLPFDDDNIRVLL----------- 221 (786)
T ss_pred cccccCCCcccCCchhh------cC--------CCCCCCccccchhHHHHHHHHhCCCCCCCccHHHHH-----------
Confidence 46777999999999999 44 112257999999999999999999 99988877431
Q ss_pred hhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHH
Q 008820 110 ACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKC 161 (552)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~ 161 (552)
........++|.. ..++.+++|.++|..||..|.+++++.+.
T Consensus 222 ------lKV~~G~f~MPs~----Is~eaQdLLr~ml~VDp~~RiT~~eI~kH 263 (786)
T KOG0588|consen 222 ------LKVQRGVFEMPSN----ISSEAQDLLRRMLDVDPSTRITTEEILKH 263 (786)
T ss_pred ------HHHHcCcccCCCc----CCHHHHHHHHHHhccCccccccHHHHhhC
Confidence 1111222333322 45569999999999999999999998875
No 232
>KOG1272 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=99.47 E-value=1.1e-13 Score=129.48 Aligned_cols=225 Identities=15% Similarity=0.239 Sum_probs=169.1
Q ss_pred CeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCc
Q 008820 294 KVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGT 373 (552)
Q Consensus 294 ~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~ 373 (552)
.-+.+.++.+|. .++.|+.-|.+-.+|+.+......+.....-.+ + .|-.+.++++++ ....+++|| +.|.
T Consensus 131 GPY~~~ytrnGr-hlllgGrKGHlAa~Dw~t~~L~~Ei~v~Etv~D-----v-~~LHneq~~AVA-QK~y~yvYD-~~Gt 201 (545)
T KOG1272|consen 131 GPYHLDYTRNGR-HLLLGGRKGHLAAFDWVTKKLHFEINVMETVRD-----V-TFLHNEQFFAVA-QKKYVYVYD-NNGT 201 (545)
T ss_pred CCeeeeecCCcc-EEEecCCccceeeeecccceeeeeeehhhhhhh-----h-hhhcchHHHHhh-hhceEEEec-CCCc
Confidence 346677777555 667888899999999987765444433222111 1 222334455555 558899999 5788
Q ss_pred eeEEecCCCCCeEEEEEeCC--EEEEEeCCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEECCCcEEEE
Q 008820 374 LSCTMSGHKSAVSTLAVCNG--VLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVW 451 (552)
Q Consensus 374 ~~~~~~~h~~~v~~l~~~~~--~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iw 451 (552)
.++.++.|. .|..+.|.+. +|++++..|.++.-|+.+|+.+..+.... + ...++.-+|-+..+-+|..+|+|.+|
T Consensus 202 ElHClk~~~-~v~rLeFLPyHfLL~~~~~~G~L~Y~DVS~GklVa~~~t~~-G-~~~vm~qNP~NaVih~GhsnGtVSlW 278 (545)
T KOG1272|consen 202 ELHCLKRHI-RVARLEFLPYHFLLVAASEAGFLKYQDVSTGKLVASIRTGA-G-RTDVMKQNPYNAVIHLGHSNGTVSLW 278 (545)
T ss_pred EEeehhhcC-chhhhcccchhheeeecccCCceEEEeechhhhhHHHHccC-C-ccchhhcCCccceEEEcCCCceEEec
Confidence 888887554 5888999855 78889999999999999999988887653 2 33447888989999999999999999
Q ss_pred e--CCcceeeeecccceEEEEEe--cCCEEEEEeCCCeEEEEecCCCeeeeeeccCCCcccCcceEEEEEeCCeEEEEeC
Q 008820 452 R--NDKFMKSMQTHKGSVFAVFL--EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQGKLFVGCA 527 (552)
Q Consensus 452 d--~~~~~~~~~~h~~~v~~v~~--~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~l~s~s~ 527 (552)
. ..+++..+..|.++|.++++ +|++++|.+.|..++|||++.-........ ..+...+++|+..+++.+.
T Consensus 279 SP~skePLvKiLcH~g~V~siAv~~~G~YMaTtG~Dr~~kIWDlR~~~ql~t~~t------p~~a~~ls~SqkglLA~~~ 352 (545)
T KOG1272|consen 279 SPNSKEPLVKILCHRGPVSSIAVDRGGRYMATTGLDRKVKIWDLRNFYQLHTYRT------PHPASNLSLSQKGLLALSY 352 (545)
T ss_pred CCCCcchHHHHHhcCCCcceEEECCCCcEEeecccccceeEeeeccccccceeec------CCCccccccccccceeeec
Confidence 8 45678888899999999987 899999999999999999997643222221 3346778888877777777
Q ss_pred CCeEEEEEe
Q 008820 528 DRTVKIALC 536 (552)
Q Consensus 528 Dg~v~iw~~ 536 (552)
...|.||.=
T Consensus 353 G~~v~iw~d 361 (545)
T KOG1272|consen 353 GDHVQIWKD 361 (545)
T ss_pred CCeeeeehh
Confidence 779999964
No 233
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=99.47 E-value=3.5e-14 Score=139.97 Aligned_cols=120 Identities=15% Similarity=0.182 Sum_probs=79.2
Q ss_pred hhhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhh-CC-C
Q 008820 13 VAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE-Q 88 (552)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~llt-g~-p 88 (552)
.+|+. |+++.+.........+...||+.|||||++ . ...++.++|||||||+||||++ |. |
T Consensus 212 ~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~------~---------~~~~~~~sDiwslG~il~el~~~g~~p 276 (338)
T cd05102 212 VVKICDFGLARDIYKDPDYVRKGSARLPLKWMAPESI------F---------DKVYTTQSDVWSFGVLLWEIFSLGASP 276 (338)
T ss_pred cEEEeecccccccccCcchhcccCCCCCccccCcHHh------h---------cCCCCcccCHHHHHHHHHHHHhCCCCC
Confidence 45665 666655443322224456678999999999 2 2456789999999999999997 99 9
Q ss_pred chHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHHhhh
Q 008820 89 FTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELI 166 (552)
Q Consensus 89 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~~~~ 166 (552)
|......... ........ ..........++.+++.+||+.+|.+||++.++.+.+..++
T Consensus 277 f~~~~~~~~~----------------~~~~~~~~---~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~el~~~l~~~~ 335 (338)
T cd05102 277 YPGVQINEEF----------------CQRLKDGT---RMRAPENATPEIYRIMLACWQGDPKERPTFSALVEILGDLL 335 (338)
T ss_pred CCCCCccHHH----------------HHHHhcCC---CCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 9763221000 00000000 00011123445899999999999999999999999888765
No 234
>PRK01742 tolB translocation protein TolB; Provisional
Probab=99.47 E-value=4.8e-12 Score=128.11 Aligned_cols=230 Identities=12% Similarity=0.153 Sum_probs=145.9
Q ss_pred CCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCC--CcEEEEeCCCCCCCccccccccCCCceeeeEEEE
Q 008820 271 DKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSG--GGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHAL 348 (552)
Q Consensus 271 dg~I~iwd~~~~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~d--g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (552)
+..|.+||.+... .+.+..|...+.+.+|+|++..++.+...+ ..|++||+.++... .+.....+. ...++
T Consensus 183 ~~~i~i~d~dg~~-~~~lt~~~~~v~~p~wSPDG~~la~~s~~~~~~~i~i~dl~tg~~~-~l~~~~g~~-----~~~~w 255 (429)
T PRK01742 183 PYEVRVADYDGFN-QFIVNRSSQPLMSPAWSPDGSKLAYVSFENKKSQLVVHDLRSGARK-VVASFRGHN-----GAPAF 255 (429)
T ss_pred eEEEEEECCCCCC-ceEeccCCCccccceEcCCCCEEEEEEecCCCcEEEEEeCCCCceE-EEecCCCcc-----CceeE
Confidence 4689999986544 566777888999999999888665544332 46999999865422 222222211 13489
Q ss_pred eeCCCEEEEee-CCCcEEEE--ECCCCceeEEecCCCCCeEEEEEe-CC-EEE-EEeCCCcEEEEECCCC-ceeEEEecC
Q 008820 349 TTSGRYLYTGS-GDRTIKAW--SLLDGTLSCTMSGHKSAVSTLAVC-NG-VLY-SGSRDGTIRLWSLSDH-SLLTVLEED 421 (552)
Q Consensus 349 ~~~~~~l~sgs-~dg~i~iw--d~~~~~~~~~~~~h~~~v~~l~~~-~~-~l~-s~~~dg~i~iwd~~~~-~~~~~~~~~ 421 (552)
+|+|+.|+.++ .+|.+.+| |+.+++. ..+..+...+.+..|+ ++ .++ ++..++..++|++... .....+ .+
T Consensus 256 SPDG~~La~~~~~~g~~~Iy~~d~~~~~~-~~lt~~~~~~~~~~wSpDG~~i~f~s~~~g~~~I~~~~~~~~~~~~l-~~ 333 (429)
T PRK01742 256 SPDGSRLAFASSKDGVLNIYVMGANGGTP-SQLTSGAGNNTEPSWSPDGQSILFTSDRSGSPQVYRMSASGGGASLV-GG 333 (429)
T ss_pred CCCCCEEEEEEecCCcEEEEEEECCCCCe-EeeccCCCCcCCEEECCCCCEEEEEECCCCCceEEEEECCCCCeEEe-cC
Confidence 99999877764 67865555 6666554 4566677778889999 43 555 4446788888887542 222222 22
Q ss_pred CCCceEEEEEEcCCCCEEEEEECCCcEEEEeCCcc-eeee-ecccceEEEEEecCCEEEEEeCCCeEEEEecC--CCeee
Q 008820 422 SSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDKF-MKSM-QTHKGSVFAVFLEGKWLFTGGWDKTVSVQELA--GDEFE 497 (552)
Q Consensus 422 ~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~~~-~~~~-~~h~~~v~~v~~~~~~l~sgs~dg~i~iwd~~--~~~~~ 497 (552)
.+ .. ..++|+|+.++..+.++ +.+||+.+. ...+ ..+...-.++++||++|+.++.++.+.+|++. ++...
T Consensus 334 -~~--~~-~~~SpDG~~ia~~~~~~-i~~~Dl~~g~~~~lt~~~~~~~~~~sPdG~~i~~~s~~g~~~~l~~~~~~G~~~ 408 (429)
T PRK01742 334 -RG--YS-AQISADGKTLVMINGDN-VVKQDLTSGSTEVLSSTFLDESPSISPNGIMIIYSSTQGLGKVLQLVSADGRFK 408 (429)
T ss_pred -CC--CC-ccCCCCCCEEEEEcCCC-EEEEECCCCCeEEecCCCCCCCceECCCCCEEEEEEcCCCceEEEEEECCCCce
Confidence 22 22 57999999998887765 566886532 2222 22222223456799999999999988888763 34343
Q ss_pred eeeccCCCcccCcceEEEEEeC
Q 008820 498 EDVIPTGAIPCGSVITALLYWQ 519 (552)
Q Consensus 498 ~~~~~~~~~~~~~~v~~l~~~~ 519 (552)
..+... ...+...+|+|
T Consensus 409 ~~l~~~-----~g~~~~p~wsp 425 (429)
T PRK01742 409 ARLPGS-----DGQVKFPAWSP 425 (429)
T ss_pred EEccCC-----CCCCCCcccCC
Confidence 333321 34466677775
No 235
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=99.46 E-value=3.3e-14 Score=138.31 Aligned_cols=113 Identities=14% Similarity=0.108 Sum_probs=74.0
Q ss_pred hhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cch
Q 008820 14 AKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFT 90 (552)
Q Consensus 14 ~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~ 90 (552)
+|+. |+++....... ....+.||+.|||||++ . ...++.++|||||||+||||+||+ ||.
T Consensus 132 ~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~------~---------~~~~~~~~DvwslGvil~el~tg~~pf~ 194 (312)
T cd05585 132 IALCDFGLCKLNMKDDD--KTNTFCGTPEYLAPELL------L---------GHGYTKAVDWWTLGVLLYEMLTGLPPFY 194 (312)
T ss_pred EEEEECcccccCccCCC--ccccccCCcccCCHHHH------c---------CCCCCCccceechhHHHHHHHhCCCCcC
Confidence 4454 45544332222 24567899999999999 2 245678999999999999999999 997
Q ss_pred HHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHHh
Q 008820 91 KELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRE 164 (552)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~~ 164 (552)
......+. ......+.........++.+++.+||+.+|.+||+...+.+.+..
T Consensus 195 ~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~h 247 (312)
T cd05585 195 DENVNEMY---------------------RKILQEPLRFPDGFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKNH 247 (312)
T ss_pred CCCHHHHH---------------------HHHHcCCCCCCCcCCHHHHHHHHHHcCCCHHHcCCCCCHHHHHcC
Confidence 64433211 111111111112234458899999999999999986655554443
No 236
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=99.46 E-value=5e-14 Score=135.66 Aligned_cols=93 Identities=24% Similarity=0.323 Sum_probs=70.8
Q ss_pred hhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhhhhhhccccCCCchhhh
Q 008820 33 SDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDYIRCVSTKASDDNIAC 111 (552)
Q Consensus 33 ~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~~~~~~~~~~~~~~~~~ 111 (552)
+.|+||-.|.+||.+ .....++.||||+||||||+||.|. ||.+.+.- +
T Consensus 245 ~SFVGTAeYVSPElL---------------~~~~~~~~sDiWAlGCilyQmlaG~PPFra~Ney-l-------------- 294 (604)
T KOG0592|consen 245 SSFVGTAEYVSPELL---------------NDSPAGPSSDLWALGCILYQMLAGQPPFRAANEY-L-------------- 294 (604)
T ss_pred cceeeeecccCHHHh---------------cCCCCCcccchHHHHHHHHHHhcCCCCCccccHH-H--------------
Confidence 669999999999999 3467789999999999999999999 99885522 1
Q ss_pred hhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHH
Q 008820 112 LGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKC 161 (552)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~ 161 (552)
+.+++........+.-+....+++.++|..+|.+|.+..++.+.
T Consensus 295 ------iFqkI~~l~y~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~H 338 (604)
T KOG0592|consen 295 ------IFQKIQALDYEFPEGFPEDARDLIKKLLVRDPSDRLTSQQIKAH 338 (604)
T ss_pred ------HHHHHHHhcccCCCCCCHHHHHHHHHHHccCccccccHHHHhhC
Confidence 22233333322223334458899999999999999999777653
No 237
>KOG1524 consensus WD40 repeat-containing protein CHE-2 [General function prediction only]
Probab=99.46 E-value=7.1e-12 Score=119.50 Aligned_cols=256 Identities=17% Similarity=0.187 Sum_probs=168.7
Q ss_pred cCccceEEEEEc-CCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEe-------cCCCCEEEEEcCCCcEEEEe
Q 008820 250 GHRDCVTGLAVG-GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYV-------DEDQPLCISGDSGGGIFVWS 321 (552)
Q Consensus 250 ~H~~~V~~l~~s-~~~l~s~s~dg~I~iwd~~~~~~~~~~~~h~~~v~~v~~~-------~~~~~~l~s~~~dg~i~vwd 321 (552)
-|..-|.|+.|+ ..-++.++.|..+.+|.-.+......+.-..+-+....+. ..+...++.++.||.+.+.+
T Consensus 12 r~~e~vc~v~w~~~eei~~~~dDh~~~~~~~~~~~s~~~~~~p~df~pt~~h~~~rs~~~g~~~d~~~i~s~DGkf~il~ 91 (737)
T KOG1524|consen 12 RNSEKVCCVDWSSNEEIYFVSDDHQIFKWSDVSRDSVEVAKLPDDFVPTDMHLGGRSSGGGKGSDTLLICSNDGRFVILN 91 (737)
T ss_pred ccceeEEeecccccceEEEeccCceEEEeecccchhhhhhhCCcccCCccccccccccCCCCCcceEEEEcCCceEEEec
Confidence 466667788888 5666666667777776544333333222222222111110 01234678899999999886
Q ss_pred CCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEeCC---EEEEE
Q 008820 322 FSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVCNG---VLYSG 398 (552)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~---~l~s~ 398 (552)
-.. +....+. .|.. ......++++|.-|+++++||.|++|. ++|....++.....+|.|++|.++ .+++.
T Consensus 92 k~~-rVE~sv~---AH~~--A~~~gRW~~dGtgLlt~GEDG~iKiWS-rsGMLRStl~Q~~~~v~c~~W~p~S~~vl~c~ 164 (737)
T KOG1524|consen 92 KSA-RVERSIS---AHAA--AISSGRWSPDGAGLLTAGEDGVIKIWS-RSGMLRSTVVQNEESIRCARWAPNSNSIVFCQ 164 (737)
T ss_pred ccc-hhhhhhh---hhhh--hhhhcccCCCCceeeeecCCceEEEEe-ccchHHHHHhhcCceeEEEEECCCCCceEEec
Confidence 431 1111121 1111 111235789999999999999999999 577777777777889999999832 45444
Q ss_pred eCCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEECCCcEEEEe-CCcceeeeecccceEEEEEecC-CE
Q 008820 399 SRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWR-NDKFMKSMQTHKGSVFAVFLEG-KW 476 (552)
Q Consensus 399 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd-~~~~~~~~~~h~~~v~~v~~~~-~~ 476 (552)
.+.+.+=.+.....+-.++.| .+.+.+ +.|++..+++++|++|-..++|| .+..+..-..|..+|++++|+. ..
T Consensus 165 --g~h~~IKpL~~n~k~i~WkAH-DGiiL~-~~W~~~s~lI~sgGED~kfKvWD~~G~~Lf~S~~~ey~ITSva~npd~~ 240 (737)
T KOG1524|consen 165 --GGHISIKPLAANSKIIRWRAH-DGLVLS-LSWSTQSNIIASGGEDFRFKIWDAQGANLFTSAAEEYAITSVAFNPEKD 240 (737)
T ss_pred --CCeEEEeecccccceeEEecc-CcEEEE-eecCccccceeecCCceeEEeecccCcccccCChhccceeeeeeccccc
Confidence 456666666666666677766 455555 69999999999999999999999 5667777888999999999944 44
Q ss_pred EEEEeCCCeEEEEecCCCeeeeeeccCCCcccCcceEEEEEeC-C-eEEEEeCCCeEEE
Q 008820 477 LFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQ-G-KLFVGCADRTVKI 533 (552)
Q Consensus 477 l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~~-~-~l~s~s~Dg~v~i 533 (552)
++.+|. +++++= .+..+.|..++|++ + ++++|+..|.+.+
T Consensus 241 ~~v~S~-nt~R~~----------------~p~~GSifnlsWS~DGTQ~a~gt~~G~v~~ 282 (737)
T KOG1524|consen 241 YLLWSY-NTARFS----------------SPRVGSIFNLSWSADGTQATCGTSTGQLIV 282 (737)
T ss_pred eeeeee-eeeeec----------------CCCccceEEEEEcCCCceeeccccCceEEE
Confidence 444443 345411 11255689999994 3 4888888887755
No 238
>KOG1524 consensus WD40 repeat-containing protein CHE-2 [General function prediction only]
Probab=99.45 E-value=1.7e-12 Score=123.66 Aligned_cols=196 Identities=16% Similarity=0.240 Sum_probs=142.7
Q ss_pred ceEEEeeCCCeEEEEE--------eecCccceEEEEEc--CCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEe
Q 008820 232 KDLVNGLSKGNVKFKD--------LQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYV 301 (552)
Q Consensus 232 ~~~~~~~~~~~~~~~~--------l~~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~~~~~~~~~h~~~v~~v~~~ 301 (552)
..++..++||+..+-. ..+|.++|.|-.|+ |.-|+|++.||.|++|. .+|-...++.....+|.|++|.
T Consensus 76 d~~~i~s~DGkf~il~k~~rVE~sv~AH~~A~~~gRW~~dGtgLlt~GEDG~iKiWS-rsGMLRStl~Q~~~~v~c~~W~ 154 (737)
T KOG1524|consen 76 DTLLICSNDGRFVILNKSARVERSISAHAAAISSGRWSPDGAGLLTAGEDGVIKIWS-RSGMLRSTVVQNEESIRCARWA 154 (737)
T ss_pred ceEEEEcCCceEEEecccchhhhhhhhhhhhhhhcccCCCCceeeeecCCceEEEEe-ccchHHHHHhhcCceeEEEEEC
Confidence 3455555666655543 57899999999999 99999999999999998 5676666666778899999999
Q ss_pred cCCCCEEEEEcCCCcEEEEeCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCceeEEecCC
Q 008820 302 DEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGH 381 (552)
Q Consensus 302 ~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h 381 (552)
|+.+.++++.+ +.+.+=.+.. ...+..|..|.+. .-...+++..+.+++|++|-..++||. .|..+..-..|
T Consensus 155 p~S~~vl~c~g--~h~~IKpL~~---n~k~i~WkAHDGi--iL~~~W~~~s~lI~sgGED~kfKvWD~-~G~~Lf~S~~~ 226 (737)
T KOG1524|consen 155 PNSNSIVFCQG--GHISIKPLAA---NSKIIRWRAHDGL--VLSLSWSTQSNIIASGGEDFRFKIWDA-QGANLFTSAAE 226 (737)
T ss_pred CCCCceEEecC--CeEEEeeccc---ccceeEEeccCcE--EEEeecCccccceeecCCceeEEeecc-cCcccccCChh
Confidence 99988887765 4444433332 2233344444432 112345566779999999999999996 67788888889
Q ss_pred CCCeEEEEEeCC-EEEEEeCCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEECCCcEEE
Q 008820 382 KSAVSTLAVCNG-VLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKV 450 (552)
Q Consensus 382 ~~~v~~l~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~i 450 (552)
..+|++++|.++ .++.+|. +++| +.....+.+.. ++||+||..+++|+..|.+.+
T Consensus 227 ey~ITSva~npd~~~~v~S~-nt~R------------~~~p~~GSifn-lsWS~DGTQ~a~gt~~G~v~~ 282 (737)
T KOG1524|consen 227 EYAITSVAFNPEKDYLLWSY-NTAR------------FSSPRVGSIFN-LSWSADGTQATCGTSTGQLIV 282 (737)
T ss_pred ccceeeeeeccccceeeeee-eeee------------ecCCCccceEE-EEEcCCCceeeccccCceEEE
Confidence 999999999955 4444443 4555 33333444555 699999999999999998765
No 239
>KOG3881 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.44 E-value=1.5e-11 Score=113.09 Aligned_cols=254 Identities=15% Similarity=0.165 Sum_probs=172.8
Q ss_pred ccceEEEEEc----CCEEEEEeCCCcEEEEeCCCCeEEEE------EeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEe
Q 008820 252 RDCVTGLAVG----GGFLFSSSFDKSIHVWSLKDFSHVHT------FKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWS 321 (552)
Q Consensus 252 ~~~V~~l~~s----~~~l~s~s~dg~I~iwd~~~~~~~~~------~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd 321 (552)
...|++++|. ...+...+.|..+....+....+... ......+|..++... ..|++|-.+|.+.+|.
T Consensus 55 ~~ris~l~~~~d~~tevl~~r~~~~~~~~~~~~E~~~~s~~~~~~~~~l~~~~I~gl~~~d---g~Litc~~sG~l~~~~ 131 (412)
T KOG3881|consen 55 LDRISSLLFGVDGETEVLNARSADDDLPKFVIEEFEISSSLDDAKTVSLGTKSIKGLKLAD---GTLITCVSSGNLQVRH 131 (412)
T ss_pred hhhhhhheeecCCceeEeeccccCcccccccccCCccccccccccccccccccccchhhcC---CEEEEEecCCcEEEEe
Confidence 4567777776 44555555777777777766554433 334566777776532 3678899999999999
Q ss_pred CCCCCCCcc-ccccccCCCceeeeEEEEeeCCCEEEEeeCC--CcEEEEECCCCceeEEecCCC---------CCeEEEE
Q 008820 322 FSFPLGHEP-LKKWNEEKDWRYSGIHALTTSGRYLYTGSGD--RTIKAWSLLDGTLSCTMSGHK---------SAVSTLA 389 (552)
Q Consensus 322 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~d--g~i~iwd~~~~~~~~~~~~h~---------~~v~~l~ 389 (552)
...+..... +..+..+. ....+-....+...+++|+.. ..+.+||+++.+.++.-+.-. -.++++.
T Consensus 132 ~k~~d~hss~l~~la~g~--g~~~~r~~~~~p~Iva~GGke~~n~lkiwdle~~~qiw~aKNvpnD~L~LrVPvW~tdi~ 209 (412)
T KOG3881|consen 132 DKSGDLHSSKLIKLATGP--GLYDVRQTDTDPYIVATGGKENINELKIWDLEQSKQIWSAKNVPNDRLGLRVPVWITDIR 209 (412)
T ss_pred ccCCccccccceeeecCC--ceeeeccCCCCCceEecCchhcccceeeeecccceeeeeccCCCCccccceeeeeeccce
Confidence 885542211 11111111 111111222234577889998 889999999886666543221 2456777
Q ss_pred Ee-C--C-EEEEEeCCCcEEEEECCCCc-eeEEEecCCCCceEEEEEEcCCCCEEEEEECCCcEEEEeCCcc---eeeee
Q 008820 390 VC-N--G-VLYSGSRDGTIRLWSLSDHS-LLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDKF---MKSMQ 461 (552)
Q Consensus 390 ~~-~--~-~l~s~~~dg~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~~~---~~~~~ 461 (552)
|- + + .|+++..-+.+|+||.+.++ ++..+.... ..+.+ +...|+++++++|..-|.+..||.++. ...++
T Consensus 210 Fl~g~~~~~fat~T~~hqvR~YDt~~qRRPV~~fd~~E-~~is~-~~l~p~gn~Iy~gn~~g~l~~FD~r~~kl~g~~~k 287 (412)
T KOG3881|consen 210 FLEGSPNYKFATITRYHQVRLYDTRHQRRPVAQFDFLE-NPISS-TGLTPSGNFIYTGNTKGQLAKFDLRGGKLLGCGLK 287 (412)
T ss_pred ecCCCCCceEEEEecceeEEEecCcccCcceeEecccc-Cccee-eeecCCCcEEEEecccchhheecccCceeeccccC
Confidence 77 3 3 89999999999999998765 566666553 33343 688999999999999999999997752 33478
Q ss_pred cccceEEEEEe--cCCEEEEEeCCCeEEEEecCCCeeeeeeccCCCcccCcceEEEEEe
Q 008820 462 THKGSVFAVFL--EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYW 518 (552)
Q Consensus 462 ~h~~~v~~v~~--~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~ 518 (552)
+-.+.+.++.. ...+++++|-|..|||+|+.+.++...... .+..+.+.+.
T Consensus 288 g~tGsirsih~hp~~~~las~GLDRyvRIhD~ktrkll~kvYv------Ks~lt~il~~ 340 (412)
T KOG3881|consen 288 GITGSIRSIHCHPTHPVLASCGLDRYVRIHDIKTRKLLHKVYV------KSRLTFILLR 340 (412)
T ss_pred CccCCcceEEEcCCCceEEeeccceeEEEeecccchhhhhhhh------hccccEEEec
Confidence 88999999876 567999999999999999998655443322 3345555554
No 240
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=99.43 E-value=7e-14 Score=136.86 Aligned_cols=92 Identities=17% Similarity=0.165 Sum_probs=65.6
Q ss_pred hhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhhhhhhccccCCCchhh
Q 008820 32 LSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDYIRCVSTKASDDNIA 110 (552)
Q Consensus 32 ~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~~~~~~~~~~~~~~~~ 110 (552)
...+.||+.|||||++ . ...++.++|||||||+||||++|+ ||.......+
T Consensus 153 ~~~~~gt~~y~aPE~~------~---------~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~------------- 204 (325)
T cd05602 153 TSTFCGTPEYLAPEVL------H---------KQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEM------------- 204 (325)
T ss_pred cccccCCccccCHHHH------c---------CCCCCCccccccccHHHHHHhcCCCCCCCCCHHHH-------------
Confidence 5567899999999999 2 255678999999999999999999 9965433311
Q ss_pred hhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHH
Q 008820 111 CLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVW 159 (552)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~ 159 (552)
...+...+.........++.+++.+||+.+|.+|++..+..
T Consensus 205 --------~~~i~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~ 245 (325)
T cd05602 205 --------YDNILNKPLQLKPNITNSARHLLEGLLQKDRTKRLGAKDDF 245 (325)
T ss_pred --------HHHHHhCCcCCCCCCCHHHHHHHHHHcccCHHHCCCCCCCH
Confidence 11111111111122345689999999999999999976433
No 241
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=99.43 E-value=5.9e-14 Score=137.23 Aligned_cols=87 Identities=17% Similarity=0.244 Sum_probs=61.6
Q ss_pred hhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhhhhhhccccCCCchhh
Q 008820 32 LSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDYIRCVSTKASDDNIA 110 (552)
Q Consensus 32 ~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~~~~~~~~~~~~~~~~ 110 (552)
...+.||+.|||||++ . ...++.++|||||||+||||+||+ ||.......+.
T Consensus 152 ~~~~~gt~~y~aPE~~------~---------~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~------------ 204 (323)
T cd05571 152 MKTFCGTPEYLAPEVL------E---------DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLF------------ 204 (323)
T ss_pred ccceecCccccChhhh------c---------CCCCCccccCcccchhhhhhhcCCCCCCCCCHHHHH------------
Confidence 4567899999999998 2 245678999999999999999999 99654433111
Q ss_pred hhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcc
Q 008820 111 CLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPL 154 (552)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~ 154 (552)
...... ..........++.+++.+||+.+|.+||+
T Consensus 205 -----~~~~~~----~~~~p~~~~~~~~~li~~~L~~dP~~R~~ 239 (323)
T cd05571 205 -----ELILME----EIRFPRTLSPEAKSLLAGLLKKDPKQRLG 239 (323)
T ss_pred -----HHHHcC----CCCCCCCCCHHHHHHHHHHccCCHHHcCC
Confidence 000000 00111123445899999999999999995
No 242
>KOG2321 consensus WD40 repeat protein [General function prediction only]
Probab=99.43 E-value=1.7e-11 Score=117.92 Aligned_cols=243 Identities=13% Similarity=0.172 Sum_probs=169.2
Q ss_pred CCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCc---------ccccc------------------ccCCCcee
Q 008820 290 GHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHE---------PLKKW------------------NEEKDWRY 342 (552)
Q Consensus 290 ~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~---------~~~~~------------------~~~~~~~~ 342 (552)
.|...-+.|..+|++.+++++|..--.|++||+....... .+..+ ....+.+.
T Consensus 49 e~p~ast~ik~s~DGqY~lAtG~YKP~ikvydlanLSLKFERhlDae~V~feiLsDD~SK~v~L~~DR~IefHak~G~hy 128 (703)
T KOG2321|consen 49 EMPTASTRIKVSPDGQYLLATGTYKPQIKVYDLANLSLKFERHLDAEVVDFEILSDDYSKSVFLQNDRTIEFHAKYGRHY 128 (703)
T ss_pred CCccccceeEecCCCcEEEEecccCCceEEEEcccceeeeeecccccceeEEEeccchhhheEeecCceeeehhhcCeee
Confidence 3677889999999999999999999999999987532110 00000 00000000
Q ss_pred e-eEE------EE-eeCCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe--CCEEEEEeCCCcEEEEECCCC
Q 008820 343 S-GIH------AL-TTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC--NGVLYSGSRDGTIRLWSLSDH 412 (552)
Q Consensus 343 ~-~~~------~~-~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~ 412 (552)
. .+- ++ .|+.. |+.++....|+-++++.|..+..+....+.++++..+ .++|++|+.||.|.+||.+..
T Consensus 129 ~~RIP~~GRDm~y~~~scD-ly~~gsg~evYRlNLEqGrfL~P~~~~~~~lN~v~in~~hgLla~Gt~~g~VEfwDpR~k 207 (703)
T KOG2321|consen 129 RTRIPKFGRDMKYHKPSCD-LYLVGSGSEVYRLNLEQGRFLNPFETDSGELNVVSINEEHGLLACGTEDGVVEFWDPRDK 207 (703)
T ss_pred eeecCcCCccccccCCCcc-EEEeecCcceEEEEccccccccccccccccceeeeecCccceEEecccCceEEEecchhh
Confidence 0 000 11 12223 4444555679999999999999998888999999998 669999999999999999988
Q ss_pred ceeEEEecCCC---------CceEEEEEEcCCCCEEEEEECCCcEEEEeCCccee-eeecc--cceEEEEEe----cCCE
Q 008820 413 SLLTVLEEDSS---------GAVSSVLSLTAVQHTLVVSHESGSIKVWRNDKFMK-SMQTH--KGSVFAVFL----EGKW 476 (552)
Q Consensus 413 ~~~~~~~~~~~---------~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~~~~~-~~~~h--~~~v~~v~~----~~~~ 476 (552)
..+.++..... ....+.+.|+.+|-.+++|+.+|.+.|||++...- ..+.| .-+|..+.| ++..
T Consensus 208 srv~~l~~~~~v~s~pg~~~~~svTal~F~d~gL~~aVGts~G~v~iyDLRa~~pl~~kdh~~e~pi~~l~~~~~~~q~~ 287 (703)
T KOG2321|consen 208 SRVGTLDAASSVNSHPGGDAAPSVTALKFRDDGLHVAVGTSTGSVLIYDLRASKPLLVKDHGYELPIKKLDWQDTDQQNK 287 (703)
T ss_pred hhheeeecccccCCCccccccCcceEEEecCCceeEEeeccCCcEEEEEcccCCceeecccCCccceeeecccccCCCce
Confidence 77666654321 12234478999999999999999999999875322 22334 457778887 2345
Q ss_pred EEEEeCCCeEEEEecCCCeeeeeeccCCCcccCcceEEEEEeC--CeEEEEeCCCeEEEEEecCCc
Q 008820 477 LFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQ--GKLFVGCADRTVKIALCNRQI 540 (552)
Q Consensus 477 l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~~--~~l~s~s~Dg~v~iw~~~~~~ 540 (552)
++|.. ...++|||-.+++....... ...++.+++-+ |.+++|-.++.+..|-++.-+
T Consensus 288 v~S~D-k~~~kiWd~~~Gk~~asiEp------t~~lND~C~~p~sGm~f~Ane~~~m~~yyiP~LG 346 (703)
T KOG2321|consen 288 VVSMD-KRILKIWDECTGKPMASIEP------TSDLNDFCFVPGSGMFFTANESSKMHTYYIPSLG 346 (703)
T ss_pred EEecc-hHHhhhcccccCCceeeccc------cCCcCceeeecCCceEEEecCCCcceeEEccccC
Confidence 55554 56899999998877665554 34477777775 568899999999888776433
No 243
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=99.43 E-value=2.7e-14 Score=125.75 Aligned_cols=111 Identities=17% Similarity=0.267 Sum_probs=73.6
Q ss_pred cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhhh
Q 008820 18 CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDY 96 (552)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~~ 96 (552)
|.|.|+.++-. -+.-.|-|+|||||.+- + +...+++-++||||||++||||.||+ ||.+-...
T Consensus 237 GIsGrlvdSkA---htrsAGC~~YMaPERid---------p---~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~td- 300 (391)
T KOG0983|consen 237 GISGRLVDSKA---HTRSAGCAAYMAPERID---------P---PDKPKYDIRADVWSLGITLVELATGQYPYKGCKTD- 300 (391)
T ss_pred cccceeecccc---cccccCCccccCccccC---------C---CCCCccchhhhhhhhccchhhhhcccCCCCCCCcc-
Confidence 66777777755 58889999999999981 1 12467788999999999999999999 99662211
Q ss_pred hhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 97 IRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
.+++..+..+.|..+.. -..-.+.+.+++..||.+|+.+||.-.++.+
T Consensus 301 ---------------Fe~ltkvln~ePP~L~~-~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~ 348 (391)
T KOG0983|consen 301 ---------------FEVLTKVLNEEPPLLPG-HMGFSPDFQSFVKDCLTKDHRKRPKYNKLLE 348 (391)
T ss_pred ---------------HHHHHHHHhcCCCCCCc-ccCcCHHHHHHHHHHhhcCcccCcchHHHhc
Confidence 00011111111101100 0112345889999999999999998655443
No 244
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=99.43 E-value=6e-14 Score=134.68 Aligned_cols=107 Identities=15% Similarity=0.193 Sum_probs=69.4
Q ss_pred hhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cch
Q 008820 14 AKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFT 90 (552)
Q Consensus 14 ~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~ 90 (552)
.|++ |++..+..... .....||+.|||||++ . ...+++++|||||||+||||++|+ ||.
T Consensus 141 ~kl~Dfg~~~~~~~~~~---~~~~~g~~~y~aPE~~------~---------~~~~~~~~DvwslGvil~el~~g~~pf~ 202 (285)
T cd05631 141 IRISDLGLAVQIPEGET---VRGRVGTVGYMAPEVI------N---------NEKYTFSPDWWGLGCLIYEMIQGQSPFR 202 (285)
T ss_pred EEEeeCCCcEEcCCCCe---ecCCCCCCCccCHhhh------c---------CCCCCcccCchhHHHHHHHHHhCCCCCC
Confidence 4555 55655443322 3567899999999999 2 356778999999999999999999 997
Q ss_pred HHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcch
Q 008820 91 KELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLL 155 (552)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~ 155 (552)
....... .....................++.+++.+||+.+|.+||+.
T Consensus 203 ~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~P~~R~~~ 250 (285)
T cd05631 203 KRKERVK-----------------REEVDRRVKEDQEEYSEKFSEDAKSICRMLLTKNPKERLGC 250 (285)
T ss_pred CCCcchh-----------------HHHHHHHhhcccccCCccCCHHHHHHHHHHhhcCHHHhcCC
Confidence 6332100 00011111111111112234458899999999999999984
No 245
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=99.42 E-value=8.9e-14 Score=133.44 Aligned_cols=112 Identities=15% Similarity=0.156 Sum_probs=75.3
Q ss_pred cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhh-CC-CchHHHhh
Q 008820 18 CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE-QFTKELID 95 (552)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~llt-g~-pf~~~~~~ 95 (552)
|+++.+...+.........||+.|||||++ ....+++++|||||||+||||++ |. ||.+....
T Consensus 169 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~---------------~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~ 233 (283)
T cd05048 169 GLSRDIYSADYYRVQSKSLLPVRWMPPEAI---------------LYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQ 233 (283)
T ss_pred cceeeccccccccccCCCcccccccCHHHh---------------ccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHH
Confidence 455554443332234566789999999998 23567789999999999999998 99 99764333
Q ss_pred hhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHHh
Q 008820 96 YIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRE 164 (552)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~~ 164 (552)
.+. ..+... ...........++.+++.+|++.+|.+||++.++.+.+..
T Consensus 234 ~~~-----------------~~i~~~---~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05048 234 EVI-----------------EMIRSR---QLLPCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRS 282 (283)
T ss_pred HHH-----------------HHHHcC---CcCCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhc
Confidence 111 000000 0001111234469999999999999999999999887654
No 246
>KOG1272 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=99.42 E-value=7.5e-13 Score=124.00 Aligned_cols=262 Identities=16% Similarity=0.169 Sum_probs=188.1
Q ss_pred ceEEEEEc--CCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCccc
Q 008820 254 CVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPL 331 (552)
Q Consensus 254 ~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~ 331 (552)
.-..+.++ |++++.|+..|.|-.+|+.+++....+. -...|.++.|..+.+ ++| ......+.|||-.. ....++
T Consensus 131 GPY~~~ytrnGrhlllgGrKGHlAa~Dw~t~~L~~Ei~-v~Etv~Dv~~LHneq-~~A-VAQK~y~yvYD~~G-tElHCl 206 (545)
T KOG1272|consen 131 GPYHLDYTRNGRHLLLGGRKGHLAAFDWVTKKLHFEIN-VMETVRDVTFLHNEQ-FFA-VAQKKYVYVYDNNG-TELHCL 206 (545)
T ss_pred CCeeeeecCCccEEEecCCccceeeeecccceeeeeee-hhhhhhhhhhhcchH-HHH-hhhhceEEEecCCC-cEEeeh
Confidence 34457777 9999999999999999999999988876 346789999987554 433 44568899998552 223333
Q ss_pred cccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe--CCEEEEEeCCCcEEEEEC
Q 008820 332 KKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC--NGVLYSGSRDGTIRLWSL 409 (552)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~ 409 (552)
+..... .-..|-|.--+|++++..|.++.-|+.+|+.+..+....+.+..++-+ +..+-+|...|+|.+|..
T Consensus 207 k~~~~v------~rLeFLPyHfLL~~~~~~G~L~Y~DVS~GklVa~~~t~~G~~~vm~qNP~NaVih~GhsnGtVSlWSP 280 (545)
T KOG1272|consen 207 KRHIRV------ARLEFLPYHFLLVAASEAGFLKYQDVSTGKLVASIRTGAGRTDVMKQNPYNAVIHLGHSNGTVSLWSP 280 (545)
T ss_pred hhcCch------hhhcccchhheeeecccCCceEEEeechhhhhHHHHccCCccchhhcCCccceEEEcCCCceEEecCC
Confidence 322111 112344444578999999999999999999999998888888888877 558889999999999999
Q ss_pred CCCceeEEEecCCCCceEEEEEEcCCCCEEEEEECCCcEEEEeCCcceeeeeccc-ceEEEEEecCCEEEEEeCCCeEEE
Q 008820 410 SDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDKFMKSMQTHK-GSVFAVFLEGKWLFTGGWDKTVSV 488 (552)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~~~~~~~~~h~-~~v~~v~~~~~~l~sgs~dg~i~i 488 (552)
...+++..+..| .+.+.+ +++.++|+++++.+.|..++|||++...+....++ -+...++++.+-+++.|....|.|
T Consensus 281 ~skePLvKiLcH-~g~V~s-iAv~~~G~YMaTtG~Dr~~kIWDlR~~~ql~t~~tp~~a~~ls~SqkglLA~~~G~~v~i 358 (545)
T KOG1272|consen 281 NSKEPLVKILCH-RGPVSS-IAVDRGGRYMATTGLDRKVKIWDLRNFYQLHTYRTPHPASNLSLSQKGLLALSYGDHVQI 358 (545)
T ss_pred CCcchHHHHHhc-CCCcce-EEECCCCcEEeecccccceeEeeeccccccceeecCCCccccccccccceeeecCCeeee
Confidence 998888777666 466666 69999999999999999999999987654433333 345567776666677777789999
Q ss_pred EecC-C--CeeeeeeccCCCcccCcceEEEEEeC--CeEEEEeCCCe
Q 008820 489 QELA-G--DEFEEDVIPTGAIPCGSVITALLYWQ--GKLFVGCADRT 530 (552)
Q Consensus 489 wd~~-~--~~~~~~~~~~~~~~~~~~v~~l~~~~--~~l~s~s~Dg~ 530 (552)
|.=. . +........ ..+...|..+.|.| +.|-.|...|.
T Consensus 359 w~d~~~~s~~~~~pYm~---H~~~~~V~~l~FcP~EDvLGIGH~~G~ 402 (545)
T KOG1272|consen 359 WKDALKGSGHGETPYMN---HRCGGPVEDLRFCPYEDVLGIGHAGGI 402 (545)
T ss_pred ehhhhcCCCCCCcchhh---hccCcccccceeccHHHeeeccccCCc
Confidence 9532 2 111111111 12355788888886 44444444443
No 247
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.42 E-value=7.7e-14 Score=131.26 Aligned_cols=105 Identities=20% Similarity=0.324 Sum_probs=69.2
Q ss_pred hhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhhhhhhccccCCCchhhh
Q 008820 33 SDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDYIRCVSTKASDDNIAC 111 (552)
Q Consensus 33 ~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~~~~~~~~~~~~~~~~~ 111 (552)
..+.|||-|||||++.+..+ .|+.|+||||||++..||.+|. ||...-+.++.-+..+..|..-.
T Consensus 188 ~tfvgtp~wmAPEvl~q~~~-------------GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLqn~pp~~~- 253 (516)
T KOG0582|consen 188 NTFVGTPCWMAPEVLMQQLH-------------GYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQNDPPTLL- 253 (516)
T ss_pred ccccCcccccChHHhhhccc-------------CccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCCCCcc-
Confidence 78999999999999754433 3678999999999999999999 99654333332112222110000
Q ss_pred hhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHH
Q 008820 112 LGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKC 161 (552)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~ 161 (552)
+ .. .+......-..++.+++..||++||.+||+++++.+.
T Consensus 254 --t-~~-------~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh 293 (516)
T KOG0582|consen 254 --T-SG-------LDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKH 293 (516)
T ss_pred --c-cc-------CChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhcc
Confidence 0 00 0001111112248899999999999999999877663
No 248
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=99.42 E-value=7.8e-14 Score=136.41 Aligned_cols=90 Identities=19% Similarity=0.180 Sum_probs=64.5
Q ss_pred hhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhhhhhhccccCCCchhh
Q 008820 32 LSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDYIRCVSTKASDDNIA 110 (552)
Q Consensus 32 ~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~~~~~~~~~~~~~~~~ 110 (552)
...+.||+.|||||++ . ...++.++|||||||+||||++|+ ||.......+
T Consensus 153 ~~~~~gt~~y~aPE~~------~---------~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~------------- 204 (323)
T cd05575 153 TSTFCGTPEYLAPEVL------R---------KQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEM------------- 204 (323)
T ss_pred cccccCChhhcChhhh------c---------CCCCCccccccccchhhhhhhcCCCCCCCCCHHHH-------------
Confidence 5667899999999998 2 245678999999999999999999 9976443311
Q ss_pred hhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhh
Q 008820 111 CLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTN 157 (552)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~ 157 (552)
...+...+.........++.+++.+||+.+|.+||++.+
T Consensus 205 --------~~~i~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~ 243 (323)
T cd05575 205 --------YDNILNKPLRLKPNISVSARHLLEGLLQKDRTKRLGAKD 243 (323)
T ss_pred --------HHHHHcCCCCCCCCCCHHHHHHHHHHhhcCHHhCCCCCC
Confidence 111111111111223445899999999999999999763
No 249
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=99.42 E-value=1.2e-13 Score=137.63 Aligned_cols=120 Identities=17% Similarity=0.255 Sum_probs=77.6
Q ss_pred hhhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhh-CC-C
Q 008820 13 VAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE-Q 88 (552)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~llt-g~-p 88 (552)
.+|++ |+++.+.......+.....+++.|||||++ ....++.++|||||||+||||++ |+ |
T Consensus 250 ~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~---------------~~~~~~~~~DvwSlGvil~ellt~G~~P 314 (374)
T cd05106 250 VAKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESI---------------FDCVYTVQSDVWSYGILLWEIFSLGKSP 314 (374)
T ss_pred eEEEeeceeeeeccCCcceeeccCCCCccceeCHHHh---------------cCCCCCccccHHHHHHHHHHHHhCCCCC
Confidence 35555 555544333222223345567889999998 23457789999999999999997 99 9
Q ss_pred chHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHHhhh
Q 008820 89 FTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELI 166 (552)
Q Consensus 89 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~~~~ 166 (552)
|......... ....... ...........++.+++.+||+.+|.+||++.++.+.+.++.
T Consensus 315 f~~~~~~~~~----------------~~~~~~~---~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~~ 373 (374)
T cd05106 315 YPGILVNSKF----------------YKMVKRG---YQMSRPDFAPPEIYSIMKMCWNLEPTERPTFSQISQLIQRQL 373 (374)
T ss_pred CccccccHHH----------------HHHHHcc---cCccCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHh
Confidence 9663322000 0000000 000111123456999999999999999999999999988754
No 250
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=99.42 E-value=5.6e-14 Score=137.24 Aligned_cols=113 Identities=24% Similarity=0.234 Sum_probs=84.4
Q ss_pred hhhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cc
Q 008820 13 VAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QF 89 (552)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf 89 (552)
.=|.+ |+|+.+++.+. ++.++|||.|||||++ ....++..+|+||+||++|.||+|. ||
T Consensus 177 ~ik~~DFGla~~~~~~~~---~~~~~Gtp~y~APEvl---------------~~~~y~~~~DiWS~Gvi~yiLL~G~~PF 238 (382)
T KOG0032|consen 177 RIKLIDFGLAKFIKPGER---LHTIVGTPEYVAPEVL---------------GGRPYGDEVDVWSIGVILYILLSGVPPF 238 (382)
T ss_pred cEEEeeCCCceEccCCce---EeeecCCccccCchhh---------------cCCCCCcccchhHHHHHHHHHhhCCCCC
Confidence 34444 89999988443 8999999999999999 2256789999999999999999999 99
Q ss_pred hHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 90 TKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
.+.+..... ..+....++.....+......+++++.++|.++|..|+++.++.+
T Consensus 239 ~~~~~~~~~-----------------~~i~~~~~~f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~ 292 (382)
T KOG0032|consen 239 WGETEFEIF-----------------LAILRGDFDFTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQ 292 (382)
T ss_pred cCCChhHHH-----------------HHHHcCCCCCCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhc
Confidence 776533111 111111123344445555666999999999999999999887666
No 251
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=99.42 E-value=8.9e-14 Score=135.70 Aligned_cols=90 Identities=20% Similarity=0.195 Sum_probs=64.0
Q ss_pred hhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhhhhhhccccCCCchhh
Q 008820 32 LSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDYIRCVSTKASDDNIA 110 (552)
Q Consensus 32 ~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~~~~~~~~~~~~~~~~ 110 (552)
...+.||+.|||||++ . ...++.++|||||||+||||++|+ ||...+...+.
T Consensus 153 ~~~~~gt~~y~aPE~~------~---------~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~------------ 205 (320)
T cd05590 153 TSTFCGTPDYIAPEIL------Q---------EMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLF------------ 205 (320)
T ss_pred ccccccCccccCHHHH------c---------CCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHH------------
Confidence 5667899999999999 2 245678999999999999999999 99764433111
Q ss_pred hhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhh
Q 008820 111 CLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTN 157 (552)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~ 157 (552)
..+.............++.+++.+||+.+|.+||++.+
T Consensus 206 ---------~~i~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~~~~~ 243 (320)
T cd05590 206 ---------EAILNDEVVYPTWLSQDAVDILKAFMTKNPTMRLGSLT 243 (320)
T ss_pred ---------HHHhcCCCCCCCCCCHHHHHHHHHHcccCHHHCCCCCC
Confidence 11100000111123445889999999999999999744
No 252
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=99.41 E-value=9.4e-14 Score=135.84 Aligned_cols=88 Identities=20% Similarity=0.209 Sum_probs=62.9
Q ss_pred hhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhhhhhhccccCCCchhh
Q 008820 32 LSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDYIRCVSTKASDDNIA 110 (552)
Q Consensus 32 ~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~~~~~~~~~~~~~~~~ 110 (552)
...+.||+.|||||++ . ...++.++|||||||+||||+||+ ||.......+.
T Consensus 158 ~~~~~gt~~y~aPE~~------~---------~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~------------ 210 (323)
T cd05616 158 TKTFCGTPDYIAPEII------A---------YQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELF------------ 210 (323)
T ss_pred cccCCCChhhcCHHHh------c---------CCCCCCccchhchhHHHHHHHhCCCCCCCCCHHHHH------------
Confidence 4567899999999999 2 355678999999999999999999 99764433111
Q ss_pred hhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcch
Q 008820 111 CLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLL 155 (552)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~ 155 (552)
..+.. ...........++.+++.+||+.+|.+|++.
T Consensus 211 -----~~i~~----~~~~~p~~~s~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05616 211 -----QSIME----HNVAYPKSMSKEAVAICKGLMTKHPGKRLGC 246 (323)
T ss_pred -----HHHHh----CCCCCCCcCCHHHHHHHHHHcccCHHhcCCC
Confidence 01111 0111111234458899999999999999985
No 253
>KOG2394 consensus WD40 protein DMR-N9 [General function prediction only]
Probab=99.41 E-value=4.7e-12 Score=120.83 Aligned_cols=192 Identities=16% Similarity=0.227 Sum_probs=133.0
Q ss_pred CCEEEEEeCCCcEEEEeCCCCeEEEEE----eCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCccccccccC
Q 008820 262 GGFLFSSSFDKSIHVWSLKDFSHVHTF----KGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEE 337 (552)
Q Consensus 262 ~~~l~s~s~dg~I~iwd~~~~~~~~~~----~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~ 337 (552)
+--++.|-.-|.|.+.|....+..+.+ .-....|+++.|.|.+..+++.+-.+|.+.++|........
T Consensus 185 g~dllIGf~tGqvq~idp~~~~~sklfne~r~i~ktsvT~ikWvpg~~~~Fl~a~~sGnlyly~~~~~~~~t-------- 256 (636)
T KOG2394|consen 185 GLDLLIGFTTGQVQLIDPINFEVSKLFNEERLINKSSVTCIKWVPGSDSLFLVAHASGNLYLYDKEIVCGAT-------- 256 (636)
T ss_pred CcceEEeeccCceEEecchhhHHHHhhhhcccccccceEEEEEEeCCCceEEEEEecCceEEeeccccccCC--------
Confidence 445777777788888876542221111 11347899999999999999999999999999874211000
Q ss_pred CCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe-CC-EEEEEeCCCcEEEEECCCCcee
Q 008820 338 KDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC-NG-VLYSGSRDGTIRLWSLSDHSLL 415 (552)
Q Consensus 338 ~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~-~~-~l~s~~~dg~i~iwd~~~~~~~ 415 (552)
.......+++..+.....-+. .+..++..+.--.+.|+..+|+ ++ +|++.+.||.+||||..+.+++
T Consensus 257 -----~p~~~~~k~~~~f~i~t~ksk------~~rNPv~~w~~~~g~in~f~FS~DG~~LA~VSqDGfLRvF~fdt~eLl 325 (636)
T KOG2394|consen 257 -----APSYQALKDGDQFAILTSKSK------KTRNPVARWHIGEGSINEFAFSPDGKYLATVSQDGFLRIFDFDTQELL 325 (636)
T ss_pred -----CCcccccCCCCeeEEeeeecc------ccCCccceeEeccccccceeEcCCCceEEEEecCceEEEeeccHHHHH
Confidence 001122234444443322111 1224444444445689999999 44 9999999999999999988776
Q ss_pred EEEecCCCCceEEEEEEcCCCCEEEEEECCCcEEEEeC--CcceeeeecccceEEEEEecC
Q 008820 416 TVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRN--DKFMKSMQTHKGSVFAVFLEG 474 (552)
Q Consensus 416 ~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~--~~~~~~~~~h~~~v~~v~~~~ 474 (552)
..++.- -+...+ ++|+|||++|++|++|--|.||.. ++.+..-++|..+|..++||.
T Consensus 326 g~mkSY-FGGLLC-vcWSPDGKyIvtGGEDDLVtVwSf~erRVVARGqGHkSWVs~VaFDp 384 (636)
T KOG2394|consen 326 GVMKSY-FGGLLC-VCWSPDGKYIVTGGEDDLVTVWSFEERRVVARGQGHKSWVSVVAFDP 384 (636)
T ss_pred HHHHhh-ccceEE-EEEcCCccEEEecCCcceEEEEEeccceEEEeccccccceeeEeecc
Confidence 555443 233444 699999999999999999999985 456777789999999999986
No 254
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=99.41 E-value=9.5e-14 Score=133.67 Aligned_cols=96 Identities=16% Similarity=0.136 Sum_probs=64.9
Q ss_pred cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhhh
Q 008820 18 CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDY 96 (552)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~~ 96 (552)
|+++.+... .....||+.|||||++ .+ ...+.++|||||||+||+|++|+ ||.......
T Consensus 146 g~~~~~~~~-----~~~~~gt~~y~aPE~~------~~---------~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~ 205 (291)
T cd05612 146 GFAKKLRDR-----TWTLCGTPEYLAPEVI------QS---------KGHNKAVDWWALGILIYEMLVGYPPFFDDNPFG 205 (291)
T ss_pred CcchhccCC-----cccccCChhhcCHHHH------cC---------CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 555555433 2356799999999998 22 44578999999999999999999 997644331
Q ss_pred hhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcc
Q 008820 97 IRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPL 154 (552)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~ 154 (552)
+ ...+..............+.+++.+||+.+|.+|++
T Consensus 206 ~---------------------~~~i~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~~ 242 (291)
T cd05612 206 I---------------------YEKILAGKLEFPRHLDLYAKDLIKKLLVVDRTRRLG 242 (291)
T ss_pred H---------------------HHHHHhCCcCCCccCCHHHHHHHHHHcCCCHHHccC
Confidence 1 011100000111122345889999999999999997
No 255
>KOG0280 consensus Uncharacterized conserved protein [Amino acid transport and metabolism]
Probab=99.41 E-value=3.4e-11 Score=106.82 Aligned_cols=265 Identities=14% Similarity=0.152 Sum_probs=162.5
Q ss_pred CCcEEEEeCCCCeEEE--EE-eCCCCCeEEEEEe--cC-CCCEEEEEcCCCcEEEEeCCCCCCCccccccccCCCcee-e
Q 008820 271 DKSIHVWSLKDFSHVH--TF-KGHDHKVMAVVYV--DE-DQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRY-S 343 (552)
Q Consensus 271 dg~I~iwd~~~~~~~~--~~-~~h~~~v~~v~~~--~~-~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~-~ 343 (552)
-|.+.+|++...+... ++ ..-...+..+.|. +. +...++-+..+|.|.++..........++......-... .
T Consensus 45 ~Gkl~Lys~~d~~~~~l~~~q~~dts~~~dm~w~~~~~~g~~~l~~a~a~G~i~~~r~~~~~ss~~L~~ls~~ki~~~~~ 124 (339)
T KOG0280|consen 45 SGKLHLYSLEDMKLSPLDTLQCTDTSTEFDMLWRIRETDGDFNLLDAHARGQIQLYRNDEDESSVHLRGLSSKKISVVEA 124 (339)
T ss_pred ccceEEEeecccccCccceeeeecccccceeeeeeccCCccceeeeccccceEEEEeeccceeeeeecccchhhhhheee
Confidence 3567777776544332 11 1233456666665 22 333567777889999998765443333333332222111 2
Q ss_pred eEEEEeeCCCEEEEeeCCCcEEEEECCCCcee--EEecCCCCCeEEEEEe---CCEEEEEeCCCcEEEEECC-CCceeEE
Q 008820 344 GIHALTTSGRYLYTGSGDRTIKAWSLLDGTLS--CTMSGHKSAVSTLAVC---NGVLYSGSRDGTIRLWSLS-DHSLLTV 417 (552)
Q Consensus 344 ~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~--~~~~~h~~~v~~l~~~---~~~l~s~~~dg~i~iwd~~-~~~~~~~ 417 (552)
-...+++.+..++++..+|.+.+-+....... +..+.|.-++....|+ ++.+++|+.|+.+..||+| .++.+..
T Consensus 125 lslD~~~~~~~i~vs~s~G~~~~v~~t~~~le~vq~wk~He~E~Wta~f~~~~pnlvytGgDD~~l~~~D~R~p~~~i~~ 204 (339)
T KOG0280|consen 125 LSLDISTSGTKIFVSDSRGSISGVYETEMVLEKVQTWKVHEFEAWTAKFSDKEPNLVYTGGDDGSLSCWDIRIPKTFIWH 204 (339)
T ss_pred eEEEeeccCceEEEEcCCCcEEEEecceeeeeecccccccceeeeeeecccCCCceEEecCCCceEEEEEecCCcceeee
Confidence 23456677888999999999997766555443 4788999999999998 6699999999999999999 3444444
Q ss_pred -EecCCCCceEEEEEEcCCCCEEEEEECCCcEEEEeCCcceeeeec--ccceEEEEEe---cCCEEEEEeCCCeEEEEec
Q 008820 418 -LEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDKFMKSMQT--HKGSVFAVFL---EGKWLFTGGWDKTVSVQEL 491 (552)
Q Consensus 418 -~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~~~~~~~~~--h~~~v~~v~~---~~~~l~sgs~dg~i~iwd~ 491 (552)
.+.| ...+.++.+-.|.+.++++|+.|..|++||++..-+.+.. -.+.|+.+.. ....|+.+..-.-.+|-+.
T Consensus 205 n~kvH-~~GV~SI~ss~~~~~~I~TGsYDe~i~~~DtRnm~kPl~~~~v~GGVWRi~~~p~~~~~lL~~CMh~G~ki~~~ 283 (339)
T KOG0280|consen 205 NSKVH-TSGVVSIYSSPPKPTYIATGSYDECIRVLDTRNMGKPLFKAKVGGGVWRIKHHPEIFHRLLAACMHNGAKILDS 283 (339)
T ss_pred cceee-ecceEEEecCCCCCceEEEeccccceeeeehhcccCccccCccccceEEEEecchhhhHHHHHHHhcCceEEEe
Confidence 2333 3445565666778899999999999999998754443321 2367777764 2333344444455677777
Q ss_pred CCCeeeeeeccCCCcccCcceEEEEEe--CCeEEEEe-CCCeEE-EEEe
Q 008820 492 AGDEFEEDVIPTGAIPCGSVITALLYW--QGKLFVGC-ADRTVK-IALC 536 (552)
Q Consensus 492 ~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~s-~Dg~v~-iw~~ 536 (552)
+.+.............+.+.+..-.|. +..++|++ .|..++ +|-.
T Consensus 284 ~~~~~e~~~~~~s~~~hdSl~YG~DWd~~~~~lATCsFYDk~~~~~Wl~ 332 (339)
T KOG0280|consen 284 SDKVLEFQIVLPSDKIHDSLCYGGDWDSKDSFLATCSFYDKKIRQLWLH 332 (339)
T ss_pred cccccchheeeeccccccceeeccccccccceeeeeeccccceeeeeee
Confidence 655333211111111223444444443 23477765 577755 7753
No 256
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=99.41 E-value=2.3e-13 Score=132.89 Aligned_cols=76 Identities=25% Similarity=0.347 Sum_probs=51.7
Q ss_pred EEecchhhhhhhhhcc--cccccccccch-hhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhh
Q 008820 2 ILVMGRRVTKSVAKVG--CVGSRICDKEV-GLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVAC 78 (552)
Q Consensus 2 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~-~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~ 78 (552)
||+.+........|++ |+|+.+..... ..-.....||+.|||||++ .| ...++.++|||||||
T Consensus 139 il~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~------~~--------~~~~~~~~DiwslG~ 204 (317)
T cd07868 139 ILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELL------LG--------ARHYTKAIDIWAIGC 204 (317)
T ss_pred EEEecCCCCcCcEEEeecCceeccCCCCccccccCCccccccccCCHHH------cC--------CCCcCchhhHHHHHH
Confidence 3444433333456676 66665543221 1124568899999999998 22 134578999999999
Q ss_pred hhhhhhhCC-CchH
Q 008820 79 ILLSLLIGE-QFTK 91 (552)
Q Consensus 79 ~l~~lltg~-pf~~ 91 (552)
++|||++|+ ||..
T Consensus 205 il~el~~g~~~f~~ 218 (317)
T cd07868 205 IFAELLTSEPIFHC 218 (317)
T ss_pred HHHHHHhCCCCccC
Confidence 999999999 9953
No 257
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=99.41 E-value=1e-13 Score=142.55 Aligned_cols=113 Identities=17% Similarity=0.193 Sum_probs=76.6
Q ss_pred hhhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cc
Q 008820 13 VAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QF 89 (552)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf 89 (552)
.+|+. |+++.+...........+.||+.|||||++ . ...++.++|||||||+||||++|+ ||
T Consensus 181 ~vkL~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~------~---------~~~~s~k~DVwSlGvilyeLltG~~Pf 245 (496)
T PTZ00283 181 LVKLGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIW------R---------RKPYSKKADMFSLGVLLYELLTLKRPF 245 (496)
T ss_pred CEEEEecccCeeccccccccccccccCCcceeCHHHh------C---------CCCCCcHHHHHHHHHHHHHHHHCCCCC
Confidence 35565 666655443222234567899999999999 2 255778999999999999999999 99
Q ss_pred hHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHH-HHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHH
Q 008820 90 TKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTY-LLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKC 161 (552)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~ 161 (552)
.......+. ..... ...........++.+++.+||+.+|.+||++.++.+.
T Consensus 246 ~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~ 297 (496)
T PTZ00283 246 DGENMEEVM---------------------HKTLAGRYDPLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNM 297 (496)
T ss_pred CCCCHHHHH---------------------HHHhcCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence 765433110 00000 0001112234469999999999999999999877653
No 258
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=99.40 E-value=1.2e-13 Score=142.07 Aligned_cols=113 Identities=19% Similarity=0.233 Sum_probs=76.3
Q ss_pred hhhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cc
Q 008820 13 VAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QF 89 (552)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf 89 (552)
..|+. |+++.+...........+.||+.|||||++ . ...++.++|||||||+||||++|+ ||
T Consensus 207 ~~kL~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~------~---------~~~~~~~~Dv~slG~~l~el~tg~~Pf 271 (478)
T PTZ00267 207 IIKLGDFGFSKQYSDSVSLDVASSFCGTPYYLAPELW------E---------RKRYSKKADMWSLGVILYELLTLHRPF 271 (478)
T ss_pred cEEEEeCcCceecCCccccccccccCCCccccCHhHh------C---------CCCCCcHHhHHHHHHHHHHHHhCCCCC
Confidence 34555 677766654433335678899999999998 2 355778999999999999999999 99
Q ss_pred hHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 90 TKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
.......+. ....... ..+.......++.+++.+||+.+|.+||++.++..
T Consensus 272 ~~~~~~~~~----------------~~~~~~~----~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~ 322 (478)
T PTZ00267 272 KGPSQREIM----------------QQVLYGK----YDPFPCPVSSGMKALLDPLLSKNPALRPTTQQLLH 322 (478)
T ss_pred CCCCHHHHH----------------HHHHhCC----CCCCCccCCHHHHHHHHHHhccChhhCcCHHHHHh
Confidence 764332110 0000000 00011123345899999999999999999887654
No 259
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=99.40 E-value=1.6e-13 Score=134.30 Aligned_cols=89 Identities=20% Similarity=0.208 Sum_probs=62.9
Q ss_pred hhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhhhhhhccccCCCchhh
Q 008820 32 LSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDYIRCVSTKASDDNIA 110 (552)
Q Consensus 32 ~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~~~~~~~~~~~~~~~~ 110 (552)
.+.+.||+.|||||++ . ...++.++|||||||+||||++|+ ||.......+.
T Consensus 158 ~~~~~g~~~y~aPE~~------~---------~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~------------ 210 (324)
T cd05589 158 TSTFCGTPEFLAPEVL------T---------ETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVF------------ 210 (324)
T ss_pred ccccccCccccCHhHh------c---------CCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHH------------
Confidence 4568899999999998 2 245678999999999999999999 99764433110
Q ss_pred hhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchh
Q 008820 111 CLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLT 156 (552)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~ 156 (552)
..+..............+.+++.+||+.+|.+||+..
T Consensus 211 ---------~~i~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~ 247 (324)
T cd05589 211 ---------DSIVNDEVRYPRFLSREAISIMRRLLRRNPERRLGSG 247 (324)
T ss_pred ---------HHHHhCCCCCCCCCCHHHHHHHHHHhhcCHhHcCCCC
Confidence 1110000011112344588999999999999999754
No 260
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=99.40 E-value=1.3e-13 Score=132.82 Aligned_cols=125 Identities=17% Similarity=0.149 Sum_probs=71.8
Q ss_pred cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhh-
Q 008820 18 CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELID- 95 (552)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~- 95 (552)
|+++...... ......||+.|||||++ . ...++.++|||||||+||||++|+ ||.+....
T Consensus 155 g~~~~~~~~~---~~~~~~~~~~y~aPE~~------~---------~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~ 216 (290)
T cd07862 155 GLARIYSFQM---ALTSVVVTLWYRAPEVL------L---------QSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVD 216 (290)
T ss_pred cceEeccCCc---ccccccccccccChHHH------h---------CCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHH
Confidence 4454443332 25677899999999998 2 245678999999999999999999 99653221
Q ss_pred ---hhhhccccCCCchhhhh-hhhHHHHH-HHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 96 ---YIRCVSTKASDDNIACL-GMYMAWME-KVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 96 ---~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
.+........+..|... ........ ..........+.....+.+++.+||+.+|++||++.++.+
T Consensus 217 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 286 (290)
T cd07862 217 QLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 286 (290)
T ss_pred HHHHHHHHhCCCChhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhc
Confidence 11111111112122100 00000000 0000001111123345889999999999999999887654
No 261
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=99.40 E-value=1.8e-13 Score=133.33 Aligned_cols=101 Identities=19% Similarity=0.172 Sum_probs=67.7
Q ss_pred cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhhh
Q 008820 18 CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDY 96 (552)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~~ 96 (552)
|+++.....+. ....+.||+.|||||++ .+ ..++.++|||||||++|||++|+ ||.+.....
T Consensus 141 g~a~~~~~~~~--~~~~~~gt~~y~aPE~~------~~---------~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~ 203 (316)
T cd05592 141 GMCKENMNGEG--KASTFCGTPDYIAPEIL------KG---------QKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDE 203 (316)
T ss_pred cCCeECCCCCC--ccccccCCccccCHHHH------cC---------CCCCCcccchhHHHHHHHHHhCCCCCCCCCHHH
Confidence 55554333222 25567899999999999 22 45678999999999999999999 997644331
Q ss_pred hhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchh
Q 008820 97 IRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLT 156 (552)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~ 156 (552)
+. ..+.. ...........++.+++.+||+.+|.+||++.
T Consensus 204 ~~-----------------~~i~~----~~~~~~~~~~~~~~~ll~~~l~~~P~~R~~~~ 242 (316)
T cd05592 204 LF-----------------DSILN----DRPHFPRWISKEAKDCLSKLFERDPTKRLGVD 242 (316)
T ss_pred HH-----------------HHHHc----CCCCCCCCCCHHHHHHHHHHccCCHHHcCCCh
Confidence 11 00000 00011112334588999999999999999864
No 262
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.39 E-value=4.1e-14 Score=139.58 Aligned_cols=113 Identities=18% Similarity=0.345 Sum_probs=76.6
Q ss_pred hhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cch
Q 008820 14 AKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFT 90 (552)
Q Consensus 14 ~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~ 90 (552)
-|+. |-+||+-+.. +.+-.|.||..|||||++- .| ...++.++|||||||++.||.||+ ||-
T Consensus 715 lKISDFGTsKRLAgin--P~TETFTGTLQYMAPEvID-----qG--------~RGYG~aADIWS~GCT~vEMATGrPPF~ 779 (1226)
T KOG4279|consen 715 LKISDFGTSKRLAGIN--PCTETFTGTLQYMAPEVID-----QG--------PRGYGKAADIWSFGCTMVEMATGRPPFV 779 (1226)
T ss_pred EEecccccchhhccCC--ccccccccchhhhChHhhc-----cC--------CcCCCchhhhhhccceeEeeccCCCCee
Confidence 3444 5577777664 4578899999999999992 22 344678999999999999999999 994
Q ss_pred HHHhhhhhhccccCCCchhhhhhhhHH-HHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 91 KELIDYIRCVSTKASDDNIACLGMYMA-WMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
.--.++- ++.+. .++.-|++|+. ...+.+.+|.+|+..+|..||++.++..
T Consensus 780 ElgspqA---------------AMFkVGmyKvHP~iPee----lsaeak~FilrcFepd~~~R~sA~~LL~ 831 (1226)
T KOG4279|consen 780 ELGSPQA---------------AMFKVGMYKVHPPIPEE----LSAEAKNFILRCFEPDPCDRPSAKDLLQ 831 (1226)
T ss_pred ecCChhH---------------hhhhhcceecCCCCcHH----HHHHHHHHHHHHcCCCcccCccHHHhcc
Confidence 3211110 11111 11111222222 2335889999999999999999887554
No 263
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=99.39 E-value=1.7e-13 Score=133.86 Aligned_cols=89 Identities=19% Similarity=0.223 Sum_probs=63.9
Q ss_pred hhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhhhhhhccccCCCchhh
Q 008820 32 LSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDYIRCVSTKASDDNIA 110 (552)
Q Consensus 32 ~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~~~~~~~~~~~~~~~~ 110 (552)
.+.+.||+.|||||++ . ...++.++|||||||+||||++|+ ||...+...+
T Consensus 153 ~~~~~gt~~y~aPE~~------~---------~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~------------- 204 (321)
T cd05603 153 TSTFCGTPEYLAPEVL------R---------KEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQM------------- 204 (321)
T ss_pred cccccCCcccCCHHHh------c---------CCCCCCcCcccccchhhhhhhcCCCCCCCCCHHHH-------------
Confidence 4667899999999998 2 245678999999999999999999 9976543311
Q ss_pred hhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchh
Q 008820 111 CLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLT 156 (552)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~ 156 (552)
...+...+..........+.+++.+||+.+|.+|++..
T Consensus 205 --------~~~i~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~ 242 (321)
T cd05603 205 --------YDNILHKPLQLPGGKTVAACDLLVGLLHKDQRRRLGAK 242 (321)
T ss_pred --------HHHHhcCCCCCCCCCCHHHHHHHHHHccCCHhhcCCCC
Confidence 11111111111122344588999999999999999864
No 264
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=99.39 E-value=2.3e-13 Score=133.67 Aligned_cols=120 Identities=16% Similarity=0.192 Sum_probs=77.7
Q ss_pred hhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhh-CC-Cc
Q 008820 14 AKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE-QF 89 (552)
Q Consensus 14 ~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~llt-g~-pf 89 (552)
+|+. |+++.+.......-.+...|++.|||||++ . ...++.++|||||||+||||++ |. ||
T Consensus 212 vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~------~---------~~~~~~~~Di~SlGv~l~el~t~g~~p~ 276 (337)
T cd05054 212 VKICDFGLARDIYKDPDYVRKGDARLPLKWMAPESI------F---------DKVYTTQSDVWSFGVLLWEIFSLGASPY 276 (337)
T ss_pred EEEeccccchhcccCcchhhccCCCCCccccCcHHh------c---------CCCCCccccHHHHHHHHHHHHHcCCCCC
Confidence 4444 455554333222224456778899999998 2 3556789999999999999998 99 99
Q ss_pred hHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHHhhhc
Q 008820 90 TKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELII 167 (552)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~~~~~ 167 (552)
.+...... . ........ ..........++.+++.+|++.+|++||++.++.+.+..++.
T Consensus 277 ~~~~~~~~-------------~---~~~~~~~~---~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~ell~~l~~~~~ 335 (337)
T cd05054 277 PGVQIDEE-------------F---CRRLKEGT---RMRAPEYATPEIYSIMLDCWHNNPEDRPTFSELVEILGDLLQ 335 (337)
T ss_pred CCCCccHH-------------H---HHHHhccC---CCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 65221100 0 00000000 000111234568899999999999999999999999887763
No 265
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=99.39 E-value=1.5e-13 Score=134.61 Aligned_cols=101 Identities=18% Similarity=0.131 Sum_probs=67.4
Q ss_pred hhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cch
Q 008820 14 AKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFT 90 (552)
Q Consensus 14 ~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~ 90 (552)
+|+. |+++.+... ...+.||+.|||||++ .+ ...+.++|||||||+||||++|+ ||.
T Consensus 157 ~kl~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~------~~---------~~~~~~~DiwslG~il~elltg~~pf~ 216 (329)
T PTZ00263 157 VKVTDFGFAKKVPDR-----TFTLCGTPEYLAPEVI------QS---------KGHGKAVDWWTMGVLLYEFIAGYPPFF 216 (329)
T ss_pred EEEeeccCceEcCCC-----cceecCChhhcCHHHH------cC---------CCCCCcceeechHHHHHHHHcCCCCCC
Confidence 4555 566655443 2346899999999999 22 44578999999999999999999 996
Q ss_pred HHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcch
Q 008820 91 KELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLL 155 (552)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~ 155 (552)
......+ .+.+..............+.+++.+||+.+|.+|++.
T Consensus 217 ~~~~~~~---------------------~~~i~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~ 260 (329)
T PTZ00263 217 DDTPFRI---------------------YEKILAGRLKFPNWFDGRARDLVKGLLQTDHTKRLGT 260 (329)
T ss_pred CCCHHHH---------------------HHHHhcCCcCCCCCCCHHHHHHHHHHhhcCHHHcCCC
Confidence 5432211 0111000000111123358899999999999999984
No 266
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=99.39 E-value=1.2e-13 Score=134.72 Aligned_cols=106 Identities=14% Similarity=0.119 Sum_probs=70.1
Q ss_pred hhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cch
Q 008820 14 AKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFT 90 (552)
Q Consensus 14 ~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~ 90 (552)
.|+. |+++.....+. ....+.||+.|||||++ . ....+.++|||||||+||||++|+ ||.
T Consensus 137 ~kL~Dfg~~~~~~~~~~--~~~~~~g~~~y~aPE~~------~---------~~~~~~~~DiwslG~il~el~tg~~p~~ 199 (318)
T cd05582 137 IKLTDFGLSKESIDHEK--KAYSFCGTVEYMAPEVV------N---------RRGHTQSADWWSFGVLMFEMLTGSLPFQ 199 (318)
T ss_pred EEEeeccCCcccCCCCC--ceecccCChhhcCHHHH------c---------CCCCCCccceeccceEeeeeccCCCCCC
Confidence 4455 55555443322 24567899999999998 2 244568999999999999999999 997
Q ss_pred HHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhh
Q 008820 91 KELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTN 157 (552)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~ 157 (552)
......+. ..+..............+.+++.+||+.+|.+||++.+
T Consensus 200 ~~~~~~~~---------------------~~i~~~~~~~p~~~~~~~~~li~~~l~~~P~~R~~a~~ 245 (318)
T cd05582 200 GKDRKETM---------------------TMILKAKLGMPQFLSPEAQSLLRALFKRNPANRLGAGP 245 (318)
T ss_pred CCCHHHHH---------------------HHHHcCCCCCCCCCCHHHHHHHHHHhhcCHhHcCCCCC
Confidence 64433110 00000000111123345889999999999999999765
No 267
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=99.39 E-value=2e-13 Score=128.59 Aligned_cols=104 Identities=14% Similarity=0.162 Sum_probs=71.4
Q ss_pred cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhhh
Q 008820 18 CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDY 96 (552)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~~ 96 (552)
|||-.|..+.. ..+-+||++|||||++ .++.++...|.|||||+||||+-|+ ||...-..
T Consensus 332 GLAvei~~g~~---~~~rvGT~GYMAPEvl---------------~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeK- 392 (591)
T KOG0986|consen 332 GLAVEIPEGKP---IRGRVGTVGYMAPEVL---------------QNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEK- 392 (591)
T ss_pred ceEEecCCCCc---cccccCcccccCHHHH---------------cCCcccCCccHHHHHhHHHHHHcccCchhhhhhh-
Confidence 78877777764 3344999999999999 3466889999999999999999999 99652211
Q ss_pred hhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchh
Q 008820 97 IRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLT 156 (552)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~ 156 (552)
.. ...+...+.+.+......-+.+++++...+|+++|.+|-...
T Consensus 393 vk----------------~eEvdrr~~~~~~ey~~kFS~eakslc~~LL~Kdp~~RLGcr 436 (591)
T KOG0986|consen 393 VK----------------REEVDRRTLEDPEEYSDKFSEEAKSLCEGLLTKDPEKRLGCR 436 (591)
T ss_pred hh----------------HHHHHHHHhcchhhcccccCHHHHHHHHHHHccCHHHhccCC
Confidence 00 001111122222222222344588999999999999997754
No 268
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.39 E-value=2.5e-13 Score=130.36 Aligned_cols=114 Identities=15% Similarity=0.201 Sum_probs=75.0
Q ss_pred hhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhh-CC-Cc
Q 008820 14 AKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE-QF 89 (552)
Q Consensus 14 ~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~llt-g~-pf 89 (552)
+|++ |+++.+.............+++.|||||++. .+.++.++|||||||+||||++ |. ||
T Consensus 163 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~---------------~~~~~~~~Dv~slG~~l~el~~~g~~p~ 227 (283)
T cd05091 163 VKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIM---------------YGKFSIDSDIWSYGVVLWEVFSYGLQPY 227 (283)
T ss_pred eEecccccccccccchheeeccCccCCccccCHHHHh---------------cCCCCcchhHHHHHHHHHHHHcCCCCCC
Confidence 4555 4555554433322345566789999999982 2456789999999999999998 77 98
Q ss_pred hHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHh-hhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHH
Q 008820 90 TKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLE-NKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIR 163 (552)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~ 163 (552)
.+.....+ ...+..... .........+.+++.+|++.+|.+||++.++...++
T Consensus 228 ~~~~~~~~---------------------~~~i~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~ 281 (283)
T cd05091 228 CGYSNQDV---------------------IEMIRNRQVLPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLR 281 (283)
T ss_pred CCCCHHHH---------------------HHHHHcCCcCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhh
Confidence 65332211 111110000 011123334889999999999999999999888765
No 269
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.39 E-value=1.8e-13 Score=123.38 Aligned_cols=98 Identities=17% Similarity=0.158 Sum_probs=68.6
Q ss_pred ccccc-ccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhh
Q 008820 18 CVGSR-ICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELID 95 (552)
Q Consensus 18 ~~~~~-~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~ 95 (552)
||+|. |+.. .-++.|+|||.|+|||++. ...++...|.|-+||++|||++|+ ||......
T Consensus 313 GLCKE~I~~g---~t~kTFCGTPEYLAPEVle---------------DnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~ 374 (516)
T KOG0690|consen 313 GLCKEEIKYG---DTTKTFCGTPEYLAPEVLE---------------DNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHE 374 (516)
T ss_pred ccchhccccc---ceeccccCChhhcCchhhc---------------cccccceeehhhhhHHHHHHHhccCcccccchh
Confidence 66653 3333 3389999999999999992 245668999999999999999999 99765555
Q ss_pred hhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcc
Q 008820 96 YIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPL 154 (552)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~ 154 (552)
.|. +-+.......+....++.+.++..+|.++|.+|-.
T Consensus 375 kLF---------------------eLIl~ed~kFPr~ls~eAktLLsGLL~kdP~kRLG 412 (516)
T KOG0690|consen 375 KLF---------------------ELILMEDLKFPRTLSPEAKTLLSGLLKKDPKKRLG 412 (516)
T ss_pred HHH---------------------HHHHhhhccCCccCCHHHHHHHHHHhhcChHhhcC
Confidence 331 11100011122224456888999999999999965
No 270
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=99.39 E-value=1.7e-13 Score=133.95 Aligned_cols=87 Identities=20% Similarity=0.240 Sum_probs=60.8
Q ss_pred hhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhhhhhhccccCCCchhh
Q 008820 32 LSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDYIRCVSTKASDDNIA 110 (552)
Q Consensus 32 ~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~~~~~~~~~~~~~~~~ 110 (552)
.....||+.|||||++ . ....+.++|||||||+||||++|+ ||........
T Consensus 157 ~~~~~gt~~y~aPE~~------~---------~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~------------- 208 (323)
T cd05584 157 THTFCGTIEYMAPEIL------M---------RSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKT------------- 208 (323)
T ss_pred ccccCCCccccChhhc------c---------CCCCCCcceecccHHHHHHHhcCCCCCCCCCHHHH-------------
Confidence 4557899999999998 2 244568999999999999999999 9976443311
Q ss_pred hhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcc
Q 008820 111 CLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPL 154 (552)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~ 154 (552)
...+..............+.+++.+||+.+|.+||+
T Consensus 209 --------~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~ 244 (323)
T cd05584 209 --------IDKILKGKLNLPPYLTPEARDLLKKLLKRNPSSRLG 244 (323)
T ss_pred --------HHHHHcCCCCCCCCCCHHHHHHHHHHcccCHhHcCC
Confidence 000000000111123445889999999999999995
No 271
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=99.39 E-value=1.6e-13 Score=146.35 Aligned_cols=113 Identities=20% Similarity=0.298 Sum_probs=74.4
Q ss_pred hhhhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-C
Q 008820 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (552)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-p 88 (552)
.++|+. |+++.+.... ....+.||+.|||||++ .+ ....+++++||||||||||||+||+ |
T Consensus 179 ~iVKLsDFGlAr~l~~~s---~~~s~vGTp~YmAPEvL------~g-------e~~~~s~KSDVWSLG~ILYELLTGk~P 242 (1021)
T PTZ00266 179 PIAKIGDFGLSKNIGIES---MAHSCVGTPYYWSPELL------LH-------ETKSYDDKSDMWALGCIIYELCSGKTP 242 (1021)
T ss_pred CceEEccCCccccccccc---cccccCCCccccCHHHH------hc-------cCCCCCchhHHHHHHHHHHHHHHCCCC
Confidence 346666 5565554332 24567899999999998 22 1234678999999999999999999 9
Q ss_pred chHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 89 FTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 89 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
|....... .....+...+.........++.++|.+||+.+|.+||++.++..
T Consensus 243 F~~~~~~~--------------------qli~~lk~~p~lpi~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~ 294 (1021)
T PTZ00266 243 FHKANNFS--------------------QLISELKRGPDLPIKGKSKELNILIKNLLNLSAKERPSALQCLG 294 (1021)
T ss_pred CCcCCcHH--------------------HHHHHHhcCCCCCcCCCCHHHHHHHHHHhcCChhHCcCHHHHhc
Confidence 96432110 00011100111111223456999999999999999999887764
No 272
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=99.39 E-value=1.8e-13 Score=134.06 Aligned_cols=87 Identities=17% Similarity=0.239 Sum_probs=60.8
Q ss_pred hhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhhhhhhccccCCCchhh
Q 008820 32 LSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDYIRCVSTKASDDNIA 110 (552)
Q Consensus 32 ~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~~~~~~~~~~~~~~~~ 110 (552)
...+.||+.|||||++ . ...++.++|||||||+||+|++|+ ||.......+.
T Consensus 152 ~~~~~gt~~y~aPE~~------~---------~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~------------ 204 (328)
T cd05593 152 MKTFCGTPEYLAPEVL------E---------DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLF------------ 204 (328)
T ss_pred cccccCCcCccChhhh------c---------CCCCCccCCccccchHHHHHhhCCCCCCCCCHHHHH------------
Confidence 4567899999999998 2 245678999999999999999999 99654333111
Q ss_pred hhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcc
Q 008820 111 CLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPL 154 (552)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~ 154 (552)
...... ..........++.+++.+||+.+|.+|++
T Consensus 205 -----~~~~~~----~~~~p~~~~~~~~~li~~~L~~dP~~R~~ 239 (328)
T cd05593 205 -----ELILME----DIKFPRTLSADAKSLLSGLLIKDPNKRLG 239 (328)
T ss_pred -----HHhccC----CccCCCCCCHHHHHHHHHHcCCCHHHcCC
Confidence 000000 00011123345889999999999999984
No 273
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=99.39 E-value=1.4e-13 Score=134.79 Aligned_cols=87 Identities=18% Similarity=0.255 Sum_probs=61.2
Q ss_pred hhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhhhhhhccccCCCchhh
Q 008820 32 LSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDYIRCVSTKASDDNIA 110 (552)
Q Consensus 32 ~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~~~~~~~~~~~~~~~~ 110 (552)
...+.||+.|||||++ . ...++.++|||||||+||||+||+ ||.......+.
T Consensus 153 ~~~~~gt~~y~aPE~~------~---------~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~------------ 205 (325)
T cd05594 153 MKTFCGTPEYLAPEVL------E---------DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLF------------ 205 (325)
T ss_pred cccccCCcccCCHHHH------c---------cCCCCCccccccccceeeeeccCCCCCCCCCHHHHH------------
Confidence 4567899999999999 2 245678999999999999999999 99654433111
Q ss_pred hhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcc
Q 008820 111 CLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPL 154 (552)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~ 154 (552)
..+............+++.+++.+||+.+|.+|++
T Consensus 206 ---------~~i~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~ 240 (325)
T cd05594 206 ---------ELILMEEIRFPRTLSPEAKSLLSGLLKKDPKQRLG 240 (325)
T ss_pred ---------HHHhcCCCCCCCCCCHHHHHHHHHHhhcCHHHhCC
Confidence 00000000111123446899999999999999973
No 274
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=99.38 E-value=2.4e-13 Score=132.47 Aligned_cols=89 Identities=19% Similarity=0.265 Sum_probs=63.3
Q ss_pred hhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhhhhhhccccCCCchhh
Q 008820 32 LSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDYIRCVSTKASDDNIA 110 (552)
Q Consensus 32 ~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~~~~~~~~~~~~~~~~ 110 (552)
...+.||+.|||||++ .+ ..++.++|||||||+||||++|+ ||.......+.
T Consensus 153 ~~~~~gt~~y~aPE~~------~~---------~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~------------ 205 (316)
T cd05620 153 ASTFCGTPDYIAPEIL------QG---------LKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELF------------ 205 (316)
T ss_pred eeccCCCcCccCHHHH------cC---------CCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHH------------
Confidence 4567899999999999 22 45678999999999999999999 99764433111
Q ss_pred hhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchh
Q 008820 111 CLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLT 156 (552)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~ 156 (552)
...... ..........++.+++.+||+.+|.+|+++.
T Consensus 206 -----~~~~~~----~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~ 242 (316)
T cd05620 206 -----ESIRVD----TPHYPRWITKESKDILEKLFERDPTRRLGVV 242 (316)
T ss_pred -----HHHHhC----CCCCCCCCCHHHHHHHHHHccCCHHHcCCCh
Confidence 011000 0111112344588999999999999999974
No 275
>KOG3881 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.38 E-value=4.9e-11 Score=109.83 Aligned_cols=206 Identities=11% Similarity=0.137 Sum_probs=153.9
Q ss_pred eecCccceEEEEEcCCEEEEEeCCCcEEEEeCCCCe----EEEEEeCCCCCeEEEEEecCCCCEEEEEcCC--CcEEEEe
Q 008820 248 LQGHRDCVTGLAVGGGFLFSSSFDKSIHVWSLKDFS----HVHTFKGHDHKVMAVVYVDEDQPLCISGDSG--GGIFVWS 321 (552)
Q Consensus 248 l~~H~~~V~~l~~s~~~l~s~s~dg~I~iwd~~~~~----~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~d--g~i~vwd 321 (552)
..+..++|..++.....|++|-.+|.+.+|..+.+. .+..+..+ ..+..+.-.+....++++|+.. ..+.+||
T Consensus 101 ~~l~~~~I~gl~~~dg~Litc~~sG~l~~~~~k~~d~hss~l~~la~g-~g~~~~r~~~~~p~Iva~GGke~~n~lkiwd 179 (412)
T KOG3881|consen 101 VSLGTKSIKGLKLADGTLITCVSSGNLQVRHDKSGDLHSSKLIKLATG-PGLYDVRQTDTDPYIVATGGKENINELKIWD 179 (412)
T ss_pred cccccccccchhhcCCEEEEEecCCcEEEEeccCCccccccceeeecC-CceeeeccCCCCCceEecCchhcccceeeee
Confidence 445667788888888899999999999999987432 23333333 5677777788888899999999 8999999
Q ss_pred CCCCCCCccccccccCCCce----eeeEEEEeeC--CCEEEEeeCCCcEEEEECCCC-ceeEEecCCCCCeEEEEEe--C
Q 008820 322 FSFPLGHEPLKKWNEEKDWR----YSGIHALTTS--GRYLYTGSGDRTIKAWSLLDG-TLSCTMSGHKSAVSTLAVC--N 392 (552)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~--~~~l~sgs~dg~i~iwd~~~~-~~~~~~~~h~~~v~~l~~~--~ 392 (552)
++........+......-.- ...-..|-+. ...|++++.-+.+++||.+.+ +++..+.--..+++++... +
T Consensus 180 le~~~qiw~aKNvpnD~L~LrVPvW~tdi~Fl~g~~~~~fat~T~~hqvR~YDt~~qRRPV~~fd~~E~~is~~~l~p~g 259 (412)
T KOG3881|consen 180 LEQSKQIWSAKNVPNDRLGLRVPVWITDIRFLEGSPNYKFATITRYHQVRLYDTRHQRRPVAQFDFLENPISSTGLTPSG 259 (412)
T ss_pred cccceeeeeccCCCCccccceeeeeeccceecCCCCCceEEEEecceeEEEecCcccCcceeEeccccCcceeeeecCCC
Confidence 98764332222221111111 1111233333 559999999999999999854 6788888778889998877 5
Q ss_pred CEEEEEeCCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEECCCcEEEEeCCc
Q 008820 393 GVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDK 455 (552)
Q Consensus 393 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~~ 455 (552)
+++++|..-+.+..||++.++..........+.+.+ +..+|...++++++-|..|||+|..+
T Consensus 260 n~Iy~gn~~g~l~~FD~r~~kl~g~~~kg~tGsirs-ih~hp~~~~las~GLDRyvRIhD~kt 321 (412)
T KOG3881|consen 260 NFIYTGNTKGQLAKFDLRGGKLLGCGLKGITGSIRS-IHCHPTHPVLASCGLDRYVRIHDIKT 321 (412)
T ss_pred cEEEEecccchhheecccCceeeccccCCccCCcce-EEEcCCCceEEeeccceeEEEeeccc
Confidence 699999999999999999999887744444566666 57889999999999999999999764
No 276
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=99.38 E-value=2.1e-13 Score=133.28 Aligned_cols=89 Identities=16% Similarity=0.209 Sum_probs=62.3
Q ss_pred hhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhhhhhhccccCCCchhh
Q 008820 32 LSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDYIRCVSTKASDDNIA 110 (552)
Q Consensus 32 ~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~~~~~~~~~~~~~~~~ 110 (552)
...+.||+.|||||++ . ...++.++|||||||+||||++|+ ||...+...+
T Consensus 153 ~~~~~gt~~y~aPE~~------~---------~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~------------- 204 (321)
T cd05591 153 TTTFCGTPDYIAPEIL------Q---------ELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDL------------- 204 (321)
T ss_pred ccccccCccccCHHHH------c---------CCCCCCccceechhHHHHHHhcCCCCCCCCCHHHH-------------
Confidence 5567899999999998 2 245678999999999999999999 9976543311
Q ss_pred hhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchh
Q 008820 111 CLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLT 156 (552)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~ 156 (552)
...+.............++.+++.+||+.+|.+|++..
T Consensus 205 --------~~~i~~~~~~~p~~~~~~~~~ll~~~L~~dp~~R~~~~ 242 (321)
T cd05591 205 --------FESILHDDVLYPVWLSKEAVSILKAFMTKNPNKRLGCV 242 (321)
T ss_pred --------HHHHHcCCCCCCCCCCHHHHHHHHHHhccCHHHcCCCC
Confidence 01110000001111234588999999999999999543
No 277
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=99.38 E-value=2.3e-13 Score=132.47 Aligned_cols=89 Identities=15% Similarity=0.145 Sum_probs=62.9
Q ss_pred hhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhhhhhhccccCCCchhh
Q 008820 32 LSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDYIRCVSTKASDDNIA 110 (552)
Q Consensus 32 ~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~~~~~~~~~~~~~~~~ 110 (552)
...+.||+.|||||++ . ...++.++|||||||+||||++|+ ||.......+.
T Consensus 153 ~~~~~gt~~y~aPE~~------~---------~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~------------ 205 (316)
T cd05619 153 TCTFCGTPDYIAPEIL------L---------GQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELF------------ 205 (316)
T ss_pred eeeecCCccccCHHHH------c---------CCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHH------------
Confidence 4567899999999998 2 245678999999999999999999 99764433110
Q ss_pred hhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchh
Q 008820 111 CLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLT 156 (552)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~ 156 (552)
.......+ ........++.+++.+||+.+|.+||++.
T Consensus 206 -----~~i~~~~~----~~~~~~~~~~~~li~~~l~~~P~~R~~~~ 242 (316)
T cd05619 206 -----QSIRMDNP----CYPRWLTREAKDILVKLFVREPERRLGVK 242 (316)
T ss_pred -----HHHHhCCC----CCCccCCHHHHHHHHHHhccCHhhcCCCh
Confidence 01100000 01112334588999999999999999986
No 278
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.38 E-value=9.8e-14 Score=132.46 Aligned_cols=109 Identities=20% Similarity=0.202 Sum_probs=75.5
Q ss_pred hhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cch
Q 008820 14 AKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFT 90 (552)
Q Consensus 14 ~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~ 90 (552)
-|.+ ||+-.+.+... +..++|+.+|-|||++.++-++ -++.||||||||||-|++|+ ||.
T Consensus 158 VKLTDFGFSNkf~PG~k---L~TsCGSLAYSAPEILLGDsYD--------------APAVDiWSLGVILyMLVCGq~PFq 220 (864)
T KOG4717|consen 158 VKLTDFGFSNKFQPGKK---LTTSCGSLAYSAPEILLGDSYD--------------APAVDIWSLGVILYMLVCGQPPFQ 220 (864)
T ss_pred eEeeeccccccCCCcch---hhcccchhhccCchhhhcCccC--------------CcchhhhHHHHHHHHHHhCCCccc
Confidence 3444 78877777665 8899999999999999433222 26899999999999999999 995
Q ss_pred HHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 91 KELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
..+-.. .+.+...-.-.+|.. ...+++++|..||..+|.+|.+.+++..
T Consensus 221 eANDSE--------------TLTmImDCKYtvPsh-------vS~eCrdLI~sMLvRdPkkRAslEeI~s 269 (864)
T KOG4717|consen 221 EANDSE--------------TLTMIMDCKYTVPSH-------VSKECRDLIQSMLVRDPKKRASLEEIVS 269 (864)
T ss_pred cccchh--------------hhhhhhcccccCchh-------hhHHHHHHHHHHHhcCchhhccHHHHhc
Confidence 433220 001111111111222 3335999999999999999999887755
No 279
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=99.38 E-value=2e-13 Score=134.13 Aligned_cols=100 Identities=16% Similarity=0.167 Sum_probs=66.3
Q ss_pred hhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cch
Q 008820 14 AKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFT 90 (552)
Q Consensus 14 ~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~ 90 (552)
.|+. |+++.+... .....||+.|||||++ .+ ..++.++|||||||+||||++|+ ||.
T Consensus 170 ikL~DFG~a~~~~~~-----~~~~~gt~~y~aPE~~------~~---------~~~~~~~DiwSlGvil~ell~G~~Pf~ 229 (340)
T PTZ00426 170 IKMTDFGFAKVVDTR-----TYTLCGTPEYIAPEIL------LN---------VGHGKAADWWTLGIFIYEILVGCPPFY 229 (340)
T ss_pred EEEecCCCCeecCCC-----cceecCChhhcCHHHH------hC---------CCCCccccccchhhHHHHHhcCCCCCC
Confidence 4444 556555433 3467899999999999 22 44568999999999999999999 997
Q ss_pred HHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcc
Q 008820 91 KELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPL 154 (552)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~ 154 (552)
..+...+ +..+... ...........+.+++.+||+.+|.+|++
T Consensus 230 ~~~~~~~-----------------~~~i~~~----~~~~p~~~~~~~~~li~~~l~~dp~~R~~ 272 (340)
T PTZ00426 230 ANEPLLI-----------------YQKILEG----IIYFPKFLDNNCKHLMKKLLSHDLTKRYG 272 (340)
T ss_pred CCCHHHH-----------------HHHHhcC----CCCCCCCCCHHHHHHHHHHcccCHHHcCC
Confidence 6443211 0011110 00011112335889999999999999974
No 280
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=99.38 E-value=6.7e-14 Score=130.50 Aligned_cols=92 Identities=18% Similarity=0.223 Sum_probs=66.6
Q ss_pred hhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhhhhhhccccCCCchh
Q 008820 31 FLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDYIRCVSTKASDDNI 109 (552)
Q Consensus 31 ~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~~~~~~~~~~~~~~~ 109 (552)
-.-.|+||-.|+|||+| +| ...+.++|.|+||+.|||||.|. ||.+.+..+
T Consensus 291 RSnSFVGThEYlAPEvI------~G---------~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~------------- 342 (459)
T KOG0610|consen 291 RSNSFVGTHEYLAPEVI------RG---------EGHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKE------------- 342 (459)
T ss_pred cccccccccccccceee------ec---------CCCCchhhHHHHHHHHHHHHhCCCCcCCCCchh-------------
Confidence 45679999999999999 44 44568999999999999999999 998866441
Q ss_pred hhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchh
Q 008820 110 ACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLT 156 (552)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~ 156 (552)
+...+..+.+..|.. ...+..++++|+++|.+||.+|-...
T Consensus 343 ----Tl~NIv~~~l~Fp~~--~~vs~~akDLIr~LLvKdP~kRlg~~ 383 (459)
T KOG0610|consen 343 ----TLRNIVGQPLKFPEE--PEVSSAAKDLIRKLLVKDPSKRLGSK 383 (459)
T ss_pred ----hHHHHhcCCCcCCCC--CcchhHHHHHHHHHhccChhhhhccc
Confidence 111111111222211 13345699999999999999998844
No 281
>PRK01742 tolB translocation protein TolB; Provisional
Probab=99.37 E-value=8.4e-11 Score=119.09 Aligned_cols=210 Identities=14% Similarity=0.125 Sum_probs=137.0
Q ss_pred EEeecCccceEEEEEc--CCEEEEEeCC---CcEEEEeCCCCeE--EEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEE
Q 008820 246 KDLQGHRDCVTGLAVG--GGFLFSSSFD---KSIHVWSLKDFSH--VHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIF 318 (552)
Q Consensus 246 ~~l~~H~~~V~~l~~s--~~~l~s~s~d---g~I~iwd~~~~~~--~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~ 318 (552)
..+..|...+.+.+|+ |+.|+.++.+ ..|++||+.+++. +..+.+| ...++|+|++..++++.+.+|.+.
T Consensus 197 ~~lt~~~~~v~~p~wSPDG~~la~~s~~~~~~~i~i~dl~tg~~~~l~~~~g~---~~~~~wSPDG~~La~~~~~~g~~~ 273 (429)
T PRK01742 197 FIVNRSSQPLMSPAWSPDGSKLAYVSFENKKSQLVVHDLRSGARKVVASFRGH---NGAPAFSPDGSRLAFASSKDGVLN 273 (429)
T ss_pred eEeccCCCccccceEcCCCCEEEEEEecCCCcEEEEEeCCCCceEEEecCCCc---cCceeECCCCCEEEEEEecCCcEE
Confidence 3466788889999999 8888887654 3699999988754 3333443 346899998887777777888877
Q ss_pred EE--eCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEee-CCCcEEEEECCCC-ceeEEecCCCCCeEEEEEe-C-
Q 008820 319 VW--SFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGS-GDRTIKAWSLLDG-TLSCTMSGHKSAVSTLAVC-N- 392 (552)
Q Consensus 319 vw--d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs-~dg~i~iwd~~~~-~~~~~~~~h~~~v~~l~~~-~- 392 (552)
+| |+.++.. .....+.. ......++|+|+.|+.++ .+|...+|+++.. .....+ .+.. .+..|+ +
T Consensus 274 Iy~~d~~~~~~----~~lt~~~~--~~~~~~wSpDG~~i~f~s~~~g~~~I~~~~~~~~~~~~l-~~~~--~~~~~SpDG 344 (429)
T PRK01742 274 IYVMGANGGTP----SQLTSGAG--NNTEPSWSPDGQSILFTSDRSGSPQVYRMSASGGGASLV-GGRG--YSAQISADG 344 (429)
T ss_pred EEEEECCCCCe----EeeccCCC--CcCCEEECCCCCEEEEEECCCCCceEEEEECCCCCeEEe-cCCC--CCccCCCCC
Confidence 66 4443321 11111111 122357899999766554 5788888876532 222233 3433 456777 3
Q ss_pred CEEEEEeCCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEECCCcEEEEeC----CcceeeeecccceEE
Q 008820 393 GVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRN----DKFMKSMQTHKGSVF 468 (552)
Q Consensus 393 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~----~~~~~~~~~h~~~v~ 468 (552)
+.++..+.++ +.+||+.+++........ . ... ..|+|+|++|+.++.++.+.+|++ ++..+.+..|.+.+.
T Consensus 345 ~~ia~~~~~~-i~~~Dl~~g~~~~lt~~~-~--~~~-~~~sPdG~~i~~~s~~g~~~~l~~~~~~G~~~~~l~~~~g~~~ 419 (429)
T PRK01742 345 KTLVMINGDN-VVKQDLTSGSTEVLSSTF-L--DES-PSISPNGIMIIYSSTQGLGKVLQLVSADGRFKARLPGSDGQVK 419 (429)
T ss_pred CEEEEEcCCC-EEEEECCCCCeEEecCCC-C--CCC-ceECCCCCEEEEEEcCCCceEEEEEECCCCceEEccCCCCCCC
Confidence 3777776654 566999988754322221 1 122 579999999999999998888763 456777777777666
Q ss_pred EEEe
Q 008820 469 AVFL 472 (552)
Q Consensus 469 ~v~~ 472 (552)
..+|
T Consensus 420 ~p~w 423 (429)
T PRK01742 420 FPAW 423 (429)
T ss_pred Cccc
Confidence 6655
No 282
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=99.37 E-value=2.3e-13 Score=132.70 Aligned_cols=88 Identities=19% Similarity=0.209 Sum_probs=62.3
Q ss_pred hhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhhhhhhccccCCCchhh
Q 008820 32 LSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDYIRCVSTKASDDNIA 110 (552)
Q Consensus 32 ~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~~~~~~~~~~~~~~~~ 110 (552)
...+.||+.|||||++ .+ ..++.++|||||||++|+|++|+ ||.......+.
T Consensus 153 ~~~~~g~~~y~aPE~~------~~---------~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~------------ 205 (318)
T cd05570 153 TSTFCGTPDYIAPEIL------SY---------QPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELF------------ 205 (318)
T ss_pred ccceecCccccCHHHh------cC---------CCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHH------------
Confidence 4557899999999999 32 55678999999999999999999 99754433110
Q ss_pred hhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcch
Q 008820 111 CLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLL 155 (552)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~ 155 (552)
..+... ..........++.+++.+||+.+|.+||+.
T Consensus 206 -----~~i~~~----~~~~~~~~~~~~~~li~~~l~~dP~~R~s~ 241 (318)
T cd05570 206 -----QSILED----EVRYPRWLSKEAKSILKSFLTKNPEKRLGC 241 (318)
T ss_pred -----HHHHcC----CCCCCCcCCHHHHHHHHHHccCCHHHcCCC
Confidence 000000 000111233458899999999999999998
No 283
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=99.37 E-value=2.8e-13 Score=130.55 Aligned_cols=100 Identities=14% Similarity=0.156 Sum_probs=70.0
Q ss_pred hhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhh-CC-CchHHHhhhhhhccccCCCchh
Q 008820 32 LSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE-QFTKELIDYIRCVSTKASDDNI 109 (552)
Q Consensus 32 ~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~llt-g~-pf~~~~~~~~~~~~~~~~~~~~ 109 (552)
.+...|++.|||||++ . ...++.++|||||||++|||+| |+ ||.......+.
T Consensus 182 ~~~~~~~~~y~aPE~~------~---------~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~----------- 235 (291)
T cd05094 182 GGHTMLPIRWMPPESI------M---------YRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVI----------- 235 (291)
T ss_pred CCCCCcceeecChHHh------c---------cCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHH-----------
Confidence 3456788999999998 2 2456789999999999999999 99 98553332110
Q ss_pred hhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHHhhh
Q 008820 110 ACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELI 166 (552)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~~~~ 166 (552)
...... .........+..+.+++.+|++.+|.+||++.++.+.+..+.
T Consensus 236 ------~~~~~~---~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~ 283 (291)
T cd05094 236 ------ECITQG---RVLERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALG 283 (291)
T ss_pred ------HHHhCC---CCCCCCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHH
Confidence 000000 000011112345899999999999999999999999888764
No 284
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=99.37 E-value=2.5e-13 Score=130.61 Aligned_cols=131 Identities=20% Similarity=0.224 Sum_probs=73.3
Q ss_pred hhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cch
Q 008820 14 AKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFT 90 (552)
Q Consensus 14 ~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~ 90 (552)
.|++ |+++.+...... ......||+.|||||++ .+ ..++.++|||||||+||||++|+ ||.
T Consensus 139 ~kl~Dfg~~~~~~~~~~~-~~~~~~~~~~y~aPE~~------~~---------~~~~~~~DiwslGvil~el~~g~~pf~ 202 (287)
T cd07848 139 LKLCDFGFARNLSEGSNA-NYTEYVATRWYRSPELL------LG---------APYGKAVDMWSVGCILGELSDGQPLFP 202 (287)
T ss_pred EEEeeccCcccccccccc-cccccccccccCCcHHH------cC---------CCCCCchhHHhHHHHHHHHHhCCCCCC
Confidence 4555 556555433221 23467899999999998 22 45678999999999999999999 996
Q ss_pred HHHhh-h---hhhccccCCCchhhhhhhhHHHHHHH-H-----H-HHhhhhcCccccHHHHHHhhcccCCCCCcchhhHH
Q 008820 91 KELID-Y---IRCVSTKASDDNIACLGMYMAWMEKV-T-----Y-LLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVW 159 (552)
Q Consensus 91 ~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~-~-----~-~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~ 159 (552)
..... . +..+.....+..+..+.......... + . ...........++.+++.+||+.+|.+||++.++.
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l 282 (287)
T cd07848 203 GESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCL 282 (287)
T ss_pred CCCHHHHHHHHHHhhCCCCHHHHHhhhccchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHh
Confidence 53221 1 11000100000000000000000000 0 0 00000111234589999999999999999988765
Q ss_pred H
Q 008820 160 K 160 (552)
Q Consensus 160 ~ 160 (552)
+
T Consensus 283 ~ 283 (287)
T cd07848 283 N 283 (287)
T ss_pred c
Confidence 4
No 285
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=99.37 E-value=2.5e-13 Score=132.94 Aligned_cols=91 Identities=14% Similarity=0.138 Sum_probs=64.2
Q ss_pred hhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhhhhhhccccCCCchhh
Q 008820 32 LSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDYIRCVSTKASDDNIA 110 (552)
Q Consensus 32 ~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~~~~~~~~~~~~~~~~ 110 (552)
...+.||+.|||||++ . ...++.++|||||||+||||++|+ ||.......+.
T Consensus 153 ~~~~~gt~~y~aPE~~------~---------~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~------------ 205 (325)
T cd05604 153 TTTFCGTPEYLAPEVI------R---------KQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMY------------ 205 (325)
T ss_pred cccccCChhhCCHHHH------c---------CCCCCCcCccccccceehhhhcCCCCCCCCCHHHHH------------
Confidence 4567899999999999 2 245678999999999999999999 99664433110
Q ss_pred hhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhH
Q 008820 111 CLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNV 158 (552)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~ 158 (552)
................++.+++.+||+.+|.+||+..+.
T Consensus 206 ---------~~~~~~~~~~~~~~~~~~~~ll~~ll~~~p~~R~~~~~~ 244 (325)
T cd05604 206 ---------DNILHKPLVLRPGASLTAWSILEELLEKDRQRRLGAKED 244 (325)
T ss_pred ---------HHHHcCCccCCCCCCHHHHHHHHHHhccCHHhcCCCCCC
Confidence 111100111111234458899999999999999997643
No 286
>KOG1310 consensus WD40 repeat protein [General function prediction only]
Probab=99.37 E-value=5.9e-12 Score=120.36 Aligned_cols=172 Identities=19% Similarity=0.268 Sum_probs=118.6
Q ss_pred EEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCccccccccCCCceeeeEEEEee-C-CCEEEEeeCCC
Q 008820 285 VHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTT-S-GRYLYTGSGDR 362 (552)
Q Consensus 285 ~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~l~sgs~dg 362 (552)
.+.+.||++.|+++.|+.+|. +|++|+.|-.+.|||.-..+....+. ..+.....++ .|-| . .+.+++|..|.
T Consensus 43 E~eL~GH~GCVN~LeWn~dG~-lL~SGSDD~r~ivWd~~~~KllhsI~---TgHtaNIFsv-KFvP~tnnriv~sgAgDk 117 (758)
T KOG1310|consen 43 EAELTGHTGCVNCLEWNADGE-LLASGSDDTRLIVWDPFEYKLLHSIS---TGHTANIFSV-KFVPYTNNRIVLSGAGDK 117 (758)
T ss_pred hhhhccccceecceeecCCCC-EEeecCCcceEEeecchhcceeeeee---cccccceeEE-eeeccCCCeEEEeccCcc
Confidence 456789999999999998666 88999999999999987433333222 2222222222 3334 2 34899999999
Q ss_pred cEEEEECCCC----------ceeEEecCCCCCeEEEEEe---CCEEEEEeCCCcEEEEECCCCcee-EE------Ee-cC
Q 008820 363 TIKAWSLLDG----------TLSCTMSGHKSAVSTLAVC---NGVLYSGSRDGTIRLWSLSDHSLL-TV------LE-ED 421 (552)
Q Consensus 363 ~i~iwd~~~~----------~~~~~~~~h~~~v~~l~~~---~~~l~s~~~dg~i~iwd~~~~~~~-~~------~~-~~ 421 (552)
.|+++|+... .....+..|...|..++.. ++.+.++++||+|+-+|++....- .. +. ..
T Consensus 118 ~i~lfdl~~~~~~~~d~~~~~~~~~~~cht~rVKria~~p~~PhtfwsasEDGtirQyDiREph~c~p~~~~~~~l~ny~ 197 (758)
T KOG1310|consen 118 LIKLFDLDSSKEGGMDHGMEETTRCWSCHTDRVKRIATAPNGPHTFWSASEDGTIRQYDIREPHVCNPDEDCPSILVNYN 197 (758)
T ss_pred eEEEEecccccccccccCccchhhhhhhhhhhhhheecCCCCCceEEEecCCcceeeecccCCccCCccccccHHHHHhc
Confidence 9999999742 3444566788888888887 359999999999999999863211 00 00 00
Q ss_pred CCCceEEEEEEcCC-CCEEEEEECCCcEEEEeCCcceeeee
Q 008820 422 SSGAVSSVLSLTAV-QHTLVVSHESGSIKVWRNDKFMKSMQ 461 (552)
Q Consensus 422 ~~~~~~~~~~~s~~-~~~l~~g~~dg~i~iwd~~~~~~~~~ 461 (552)
..-....++.++|. ..+|++|+.|-..++||.+..+..+.
T Consensus 198 ~~lielk~ltisp~rp~~laVGgsdpfarLYD~Rr~lks~~ 238 (758)
T KOG1310|consen 198 PQLIELKCLTISPSRPYYLAVGGSDPFARLYDRRRVLKSFR 238 (758)
T ss_pred hhhheeeeeeecCCCCceEEecCCCchhhhhhhhhhccCCC
Confidence 01111223567765 46899999999999999766555443
No 287
>PTZ00284 protein kinase; Provisional
Probab=99.37 E-value=1.9e-13 Score=140.59 Aligned_cols=114 Identities=15% Similarity=0.158 Sum_probs=67.9
Q ss_pred hhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhhh-hhhcc--ccCCCc
Q 008820 32 LSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDY-IRCVS--TKASDD 107 (552)
Q Consensus 32 ~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~~-~~~~~--~~~~~~ 107 (552)
.+.++||+.|||||++ .| ..++.++|||||||+||||+||+ ||++..... +..+. ....|.
T Consensus 302 ~~~~~gt~~Y~APE~~------~~---------~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~p~ 366 (467)
T PTZ00284 302 RTAIVSTRHYRSPEVV------LG---------LGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLHLMEKTLGRLPS 366 (467)
T ss_pred cccccCCccccCcHHh------hc---------CCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCH
Confidence 4568999999999999 22 55778999999999999999999 996533221 11100 111233
Q ss_pred hhhhhhhh---HHHHHH------------HHHHHhh---hhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 108 NIACLGMY---MAWMEK------------VTYLLEN---KFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 108 ~~~~~~~~---~~~~~~------------~~~~~~~---~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
.|...... ...... ....... ........+.++|.+||++||.+||++.++.+
T Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L~ 437 (467)
T PTZ00284 367 EWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMTT 437 (467)
T ss_pred HHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHHhc
Confidence 33211000 000000 0000000 00011234779999999999999999988765
No 288
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=99.37 E-value=3.6e-13 Score=128.74 Aligned_cols=115 Identities=17% Similarity=0.167 Sum_probs=75.0
Q ss_pred hhhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhh-CC-C
Q 008820 13 VAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE-Q 88 (552)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~llt-g~-p 88 (552)
.+|.. |+++.+.............+++.|||||++ ....++.++|||||||+||||++ |+ |
T Consensus 157 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~---------------~~~~~~~~~DiwslG~il~el~~~g~~p 221 (277)
T cd05036 157 VAKIADFGMARDIYRASYYRKGGRAMLPIKWMPPEAF---------------LDGIFTSKTDVWSFGVLLWEIFSLGYMP 221 (277)
T ss_pred ceEeccCccccccCCccceecCCCCCccHhhCCHHHH---------------hcCCcCchhHHHHHHHHHHHHHcCCCCC
Confidence 45555 566666443322123344556789999999 23557799999999999999997 88 9
Q ss_pred chHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHH-HhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHH
Q 008820 89 FTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYL-LENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIR 163 (552)
Q Consensus 89 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~ 163 (552)
|.......+. ..+... ........+.++.+++.+|++.+|++||++.++.+.+.
T Consensus 222 f~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~ 276 (277)
T cd05036 222 YPGRTNQEVM---------------------EFVTGGGRLDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ 276 (277)
T ss_pred CCCCCHHHHH---------------------HHHHcCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence 9764433211 000000 00011123345889999999999999999999877653
No 289
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.37 E-value=3e-13 Score=132.94 Aligned_cols=111 Identities=17% Similarity=0.137 Sum_probs=68.8
Q ss_pred hhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cch
Q 008820 14 AKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFT 90 (552)
Q Consensus 14 ~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~ 90 (552)
+|+. |+++.+...+.. ....+.||+.|||||++ .+ ....+.++|||||||+||||+||+ ||.
T Consensus 144 ~kl~DfG~~~~~~~~~~~-~~~~~~gt~~y~aPE~~------~~--------~~~~~~~~DiwslG~il~elltg~~pf~ 208 (332)
T cd05614 144 VVLTDFGLSKEFLSEEKE-RTYSFCGTIEYMAPEII------RG--------KGGHGKAVDWWSLGILIFELLTGASPFT 208 (332)
T ss_pred EEEeeCcCCccccccCCC-ccccccCCccccCHHHh------cC--------CCCCCCccccccchhhhhhhhcCCCCCC
Confidence 4555 555554333221 23467899999999998 22 123567999999999999999999 996
Q ss_pred HHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchh
Q 008820 91 KELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLT 156 (552)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~ 156 (552)
....... ......................+.+++.+||+.+|.+||+..
T Consensus 209 ~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~ 257 (332)
T cd05614 209 LEGERNT-----------------QSEVSRRILKCDPPFPSFIGPEAQDLLHKLLRKDPKKRLGAG 257 (332)
T ss_pred CCCCCCC-----------------HHHHHHHHhcCCCCCCCCCCHHHHHHHHHHcCCCHHHcCCCC
Confidence 4321100 001111111111111122344588999999999999999654
No 290
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=99.37 E-value=5e-13 Score=130.54 Aligned_cols=76 Identities=25% Similarity=0.359 Sum_probs=52.0
Q ss_pred EEecchhhhhhhhhcc--cccccccccchh-hhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhh
Q 008820 2 ILVMGRRVTKSVAKVG--CVGSRICDKEVG-LFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVAC 78 (552)
Q Consensus 2 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~ 78 (552)
||+++........|+. |+++.+...... .......||+.|||||++ .+ ...++.++|||||||
T Consensus 139 il~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~------~~--------~~~~~~~~DiwSlG~ 204 (317)
T cd07867 139 ILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELL------LG--------ARHYTKAIDIWAIGC 204 (317)
T ss_pred EEEccCCCCCCcEEEeeccceeccCCCcccccccCcceecccccCcHHh------cC--------CCccCcHHHHHhHHH
Confidence 3454443333345666 666655443221 124567899999999998 22 234578999999999
Q ss_pred hhhhhhhCC-CchH
Q 008820 79 ILLSLLIGE-QFTK 91 (552)
Q Consensus 79 ~l~~lltg~-pf~~ 91 (552)
+||||+||+ ||..
T Consensus 205 il~el~tg~~~f~~ 218 (317)
T cd07867 205 IFAELLTSEPIFHC 218 (317)
T ss_pred HHHHHHhCCCCccc
Confidence 999999999 9953
No 291
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=99.36 E-value=2.9e-13 Score=129.53 Aligned_cols=109 Identities=11% Similarity=0.096 Sum_probs=68.6
Q ss_pred hhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cch
Q 008820 14 AKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFT 90 (552)
Q Consensus 14 ~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~ 90 (552)
.|+. |+++.+..... ......||+.|||||++ . ...++.++|||||||+||||++|+ ||.
T Consensus 136 ~~l~dfg~~~~~~~~~~--~~~~~~g~~~y~aPE~~------~---------~~~~~~~~DvwslG~il~el~~g~~pf~ 198 (280)
T cd05608 136 VRISDLGLAVELKDGQS--KTKGYAGTPGFMAPELL------Q---------GEEYDFSVDYFALGVTLYEMIAARGPFR 198 (280)
T ss_pred EEEeeCccceecCCCCc--cccccCCCcCccCHHHh------c---------CCCCCccccHHHHHHHHHHHHhCCCCCC
Confidence 4555 44554443322 13457899999999999 2 255678999999999999999999 996
Q ss_pred HHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchh
Q 008820 91 KELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLT 156 (552)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~ 156 (552)
....... ...........+..........+.+++.+||+.+|.+||+..
T Consensus 199 ~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~ 247 (280)
T cd05608 199 ARGEKVE-----------------NKELKQRILNDSVTYPDKFSPASKSFCEALLAKDPEKRLGFR 247 (280)
T ss_pred CCCcchh-----------------HHHHHHhhcccCCCCcccCCHHHHHHHHHHhcCCHHHhcCCC
Confidence 5321100 001111111001111112344589999999999999999643
No 292
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.36 E-value=5.1e-13 Score=130.37 Aligned_cols=130 Identities=20% Similarity=0.226 Sum_probs=82.7
Q ss_pred hhhhhhcc--cccccccccchhhhhhhc-cccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhC
Q 008820 10 TKSVAKVG--CVGSRICDKEVGLFLSDF-LESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIG 86 (552)
Q Consensus 10 ~~~~~~~~--~~~~~~~~~~~~~~~~~~-~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg 86 (552)
.+--||+. |||+.....+.. .+.. .||.+|+|||++ ..+.++.|+|||||||+|+||+||
T Consensus 212 ~~~~aKlsDFGLa~~~~~~~~~--~~~~~~gt~gY~~PEy~---------------~~g~lt~KsDVySFGVvllElitg 274 (361)
T KOG1187|consen 212 EDFNAKLSDFGLAKLGPEGDTS--VSTTVMGTFGYLAPEYA---------------STGKLTEKSDVYSFGVVLLELITG 274 (361)
T ss_pred CCCCEEccCccCcccCCccccc--eeeecCCCCccCChhhh---------------ccCCcCcccccccchHHHHHHHhC
Confidence 34568888 777444331221 2233 999999999999 457889999999999999999999
Q ss_pred C-CchHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhc-C------ccccHHHHHHhhcccCCCCCcchhhH
Q 008820 87 E-QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFG-S------EFVSLQLMFCQCLNFDPGCRPLLTNV 158 (552)
Q Consensus 87 ~-pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~------~~~~l~~~~~~~l~~~p~~R~~~~~~ 158 (552)
+ |.+..... .+.....|.. +..-.....++..+... . ....+..+..+|++.+|..||.|.++
T Consensus 275 r~~~d~~~~~------~~~~l~~w~~---~~~~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~V 345 (361)
T KOG1187|consen 275 RKAVDQSRPR------GELSLVEWAK---PLLEEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQV 345 (361)
T ss_pred CcccCCCCCc------ccccHHHHHH---HHHHCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHH
Confidence 9 88753311 1111223321 11111122222222211 1 12237778889999999999999998
Q ss_pred HHHHHhh
Q 008820 159 WKCIREL 165 (552)
Q Consensus 159 ~~~l~~~ 165 (552)
.+.+..+
T Consensus 346 v~~L~~~ 352 (361)
T KOG1187|consen 346 VKELEGI 352 (361)
T ss_pred HHHHHhh
Confidence 7777544
No 293
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=99.36 E-value=2.2e-13 Score=118.48 Aligned_cols=96 Identities=18% Similarity=0.379 Sum_probs=67.5
Q ss_pred ccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhh--h--hhhccccCCCchhhh
Q 008820 37 ESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELID--Y--IRCVSTKASDDNIAC 111 (552)
Q Consensus 37 g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~--~--~~~~~~~~~~~~~~~ 111 (552)
=|..|.|||.+ ..+....+++++|||||||+||+|+.|. ||+..... + ++..+.+
T Consensus 200 Ct~pyRAPELf------------~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~GgSlaLAv~n~q-------- 259 (302)
T KOG2345|consen 200 CTIPYRAPELF------------NVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQGGSLALAVQNAQ-------- 259 (302)
T ss_pred CCCcccCchhe------------ecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcCCeEEEeeeccc--------
Confidence 38999999998 2334567889999999999999999999 99774422 1 1111111
Q ss_pred hhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHHhh
Q 008820 112 LGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIREL 165 (552)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~~~ 165 (552)
+ ..|. ....+..+.+++..||+.+|.+||+..++...+..+
T Consensus 260 ---~--------s~P~--~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~L 300 (302)
T KOG2345|consen 260 ---I--------SIPN--SSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDL 300 (302)
T ss_pred ---c--------ccCC--CCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhh
Confidence 0 0111 111233488999999999999999999887766544
No 294
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=99.35 E-value=5.8e-13 Score=132.80 Aligned_cols=118 Identities=16% Similarity=0.225 Sum_probs=75.8
Q ss_pred hhhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhh-CC-C
Q 008820 13 VAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE-Q 88 (552)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~llt-g~-p 88 (552)
.+|+. |+++.+.............+++.|||||++ . ...++.++|||||||+||||++ |. |
T Consensus 252 ~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~------~---------~~~~~~~sDi~slG~~l~ellt~g~~p 316 (375)
T cd05104 252 ITKICDFGLARDIRNDSNYVVKGNARLPVKWMAPESI------F---------NCVYTFESDVWSYGILLWEIFSLGSSP 316 (375)
T ss_pred cEEEecCccceeccCcccccccCCCCCCcceeChhHh------c---------CCCCCCCCCHHHHHHHHHHHHhcCCCC
Confidence 45665 556555443322223345567889999998 2 2556789999999999999998 78 9
Q ss_pred chHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHHh
Q 008820 89 FTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRE 164 (552)
Q Consensus 89 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~~ 164 (552)
|........ . .+.+.... ..........++.+++.+||+.+|++||++.++.+.+.+
T Consensus 317 ~~~~~~~~~-------------~---~~~~~~~~---~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~ 373 (375)
T cd05104 317 YPGMPVDSK-------------F---YKMIKEGY---RMLSPECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQ 373 (375)
T ss_pred CCCCCchHH-------------H---HHHHHhCc---cCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHh
Confidence 965321100 0 00110000 000011223458999999999999999999999888765
No 295
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=99.35 E-value=4.3e-13 Score=128.44 Aligned_cols=96 Identities=14% Similarity=0.183 Sum_probs=66.4
Q ss_pred hhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhh-CC-CchHHHhhhhhhccccCCCchhh
Q 008820 33 SDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE-QFTKELIDYIRCVSTKASDDNIA 110 (552)
Q Consensus 33 ~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~llt-g~-pf~~~~~~~~~~~~~~~~~~~~~ 110 (552)
....+++.|||||++ . ...+++++|||||||++|||++ |+ ||.......+.
T Consensus 182 ~~~~~~~~y~aPE~~------~---------~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~~~------------ 234 (280)
T cd05049 182 GHTMLPIRWMPPESI------M---------YRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEEVI------------ 234 (280)
T ss_pred CCCcccceecChhhh------c---------cCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHH------------
Confidence 445678999999998 2 3567789999999999999999 99 99553322110
Q ss_pred hhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHH
Q 008820 111 CLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIR 163 (552)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~ 163 (552)
....... ...........+.+++.+||+.+|++||++.++.+.+.
T Consensus 235 -----~~~~~~~---~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~ 279 (280)
T cd05049 235 -----ECITQGR---LLQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQ 279 (280)
T ss_pred -----HHHHcCC---cCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence 0000000 00111123345899999999999999999998877653
No 296
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=99.35 E-value=2.3e-13 Score=132.95 Aligned_cols=87 Identities=18% Similarity=0.258 Sum_probs=61.1
Q ss_pred hhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhhhhhhccccCCCchhh
Q 008820 32 LSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDYIRCVSTKASDDNIA 110 (552)
Q Consensus 32 ~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~~~~~~~~~~~~~~~~ 110 (552)
...+.||+.|||||++ . ...++.++|||||||+||||++|+ ||.......+.
T Consensus 152 ~~~~~gt~~y~aPE~~------~---------~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~------------ 204 (323)
T cd05595 152 MKTFCGTPEYLAPEVL------E---------DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLF------------ 204 (323)
T ss_pred cccccCCcCcCCcccc------c---------CCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHH------------
Confidence 4567899999999998 2 255678999999999999999999 99654333110
Q ss_pred hhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcc
Q 008820 111 CLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPL 154 (552)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~ 154 (552)
................++.+++.+||+.+|.+|+.
T Consensus 205 ---------~~~~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~ 239 (323)
T cd05595 205 ---------ELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLG 239 (323)
T ss_pred ---------HHHhcCCCCCCCCCCHHHHHHHHHHccCCHHHhCC
Confidence 00000000011123445889999999999999984
No 297
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=99.35 E-value=5e-13 Score=128.52 Aligned_cols=100 Identities=12% Similarity=0.170 Sum_probs=69.1
Q ss_pred hhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhh-CC-CchHHHhhhhhhccccCCCchh
Q 008820 32 LSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE-QFTKELIDYIRCVSTKASDDNI 109 (552)
Q Consensus 32 ~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~llt-g~-pf~~~~~~~~~~~~~~~~~~~~ 109 (552)
.+...|++.|||||++ . ...++.++|||||||++|+|+| |+ ||.......+.
T Consensus 179 ~~~~~~~~~y~aPE~~------~---------~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~~~----------- 232 (288)
T cd05093 179 GGHTMLPIRWMPPESI------M---------YRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVI----------- 232 (288)
T ss_pred CCCCCccccccCHHHh------c---------cCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHH-----------
Confidence 3455678899999998 2 2456789999999999999999 88 98653322110
Q ss_pred hhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHHhhh
Q 008820 110 ACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELI 166 (552)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~~~~ 166 (552)
....... ........+.++.+++.+||+.+|.+||++.++...+..+.
T Consensus 233 ------~~i~~~~---~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~ 280 (288)
T cd05093 233 ------ECITQGR---VLQRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLA 280 (288)
T ss_pred ------HHHHcCC---cCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHH
Confidence 0000000 00011123446999999999999999999999988877764
No 298
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=99.35 E-value=3.6e-13 Score=131.78 Aligned_cols=89 Identities=20% Similarity=0.177 Sum_probs=62.4
Q ss_pred hhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhhhhhhccccCCCchhh
Q 008820 32 LSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDYIRCVSTKASDDNIA 110 (552)
Q Consensus 32 ~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~~~~~~~~~~~~~~~~ 110 (552)
.....||+.|||||++ .+ ..++.++|||||||+||||+||+ ||.......+.
T Consensus 158 ~~~~~gt~~y~aPE~~------~~---------~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~------------ 210 (324)
T cd05587 158 TRTFCGTPDYIAPEII------AY---------QPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELF------------ 210 (324)
T ss_pred eeeecCCccccChhhh------cC---------CCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHH------------
Confidence 4467899999999999 22 45678999999999999999999 99764433110
Q ss_pred hhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchh
Q 008820 111 CLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLT 156 (552)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~ 156 (552)
..+.. ...........++.+++.+||..+|.+|++..
T Consensus 211 -----~~i~~----~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~ 247 (324)
T cd05587 211 -----QSIME----HNVSYPKSLSKEAVSICKGLLTKHPAKRLGCG 247 (324)
T ss_pred -----HHHHc----CCCCCCCCCCHHHHHHHHHHhhcCHHHcCCCC
Confidence 01111 01111112344588999999999999999863
No 299
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.35 E-value=3.6e-13 Score=125.31 Aligned_cols=100 Identities=21% Similarity=0.218 Sum_probs=70.5
Q ss_pred cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhhh
Q 008820 18 CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDY 96 (552)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~~ 96 (552)
|++|.---..++ +..|+|||.|||||++ .-..++..+|.||+||+|||||.|+ ||+++....
T Consensus 495 GmcKEni~~~~T--TkTFCGTPdYiAPEIi---------------~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~e 557 (683)
T KOG0696|consen 495 GMCKENIFDGVT--TKTFCGTPDYIAPEII---------------AYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDE 557 (683)
T ss_pred ccccccccCCcc--eeeecCCCcccccceE---------------EecccccchhHHHHHHHHHHHHcCCCCCCCCCHHH
Confidence 555433333333 7899999999999999 2245667899999999999999999 998876552
Q ss_pred hhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcch
Q 008820 97 IRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLL 155 (552)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~ 155 (552)
| .+.+.++....| ...+.+..++....|.+.|.+|-..
T Consensus 558 l-----------------F~aI~ehnvsyP----KslSkEAv~ickg~ltK~P~kRLGc 595 (683)
T KOG0696|consen 558 L-----------------FQAIMEHNVSYP----KSLSKEAVAICKGLLTKHPGKRLGC 595 (683)
T ss_pred H-----------------HHHHHHccCcCc----ccccHHHHHHHHHHhhcCCccccCC
Confidence 2 333433332222 2234457788888999999999664
No 300
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=99.35 E-value=4.4e-13 Score=129.62 Aligned_cols=113 Identities=20% Similarity=0.337 Sum_probs=77.0
Q ss_pred hhhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cc
Q 008820 13 VAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QF 89 (552)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf 89 (552)
+-||- |-++..+++.. .-.|.||.+|||||+| .+....+|+|||||||+|+|||||. ||
T Consensus 250 ~VKIsDFGTS~e~~~~ST---kMSFaGTVaWMAPEvI---------------rnePcsEKVDIwSfGVVLWEmLT~EiPY 311 (904)
T KOG4721|consen 250 VVKISDFGTSKELSDKST---KMSFAGTVAWMAPEVI---------------RNEPCSEKVDIWSFGVVLWEMLTGEIPY 311 (904)
T ss_pred eEEeccccchHhhhhhhh---hhhhhhhHhhhCHHHh---------------hcCCcccccceehhHHHHHHHHhcCCCc
Confidence 44555 55677777743 6679999999999999 3467789999999999999999999 99
Q ss_pred hHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHH
Q 008820 90 TKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCI 162 (552)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l 162 (552)
..-....|+ |.+-..... ..+|.. .+.-++-++.+|++..|..||+..++...+
T Consensus 312 kdVdssAII-------------wGVGsNsL~--LpvPst----cP~GfklL~Kqcw~sKpRNRPSFrqil~Hl 365 (904)
T KOG4721|consen 312 KDVDSSAII-------------WGVGSNSLH--LPVPST----CPDGFKLLLKQCWNSKPRNRPSFRQILLHL 365 (904)
T ss_pred cccchheeE-------------EeccCCccc--ccCccc----CchHHHHHHHHHHhcCCCCCccHHHHHHHH
Confidence 653333222 211000000 001111 122388899999999999999987665544
No 301
>PRK11138 outer membrane biogenesis protein BamB; Provisional
Probab=99.34 E-value=3.9e-09 Score=106.01 Aligned_cols=262 Identities=14% Similarity=0.063 Sum_probs=168.7
Q ss_pred EEEcCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCccccccccC
Q 008820 258 LAVGGGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEE 337 (552)
Q Consensus 258 l~~s~~~l~s~s~dg~I~iwd~~~~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~ 337 (552)
+...++.++.++.+|.+..+|.++|+.+.+.+.......+.... ++ .++.++.++.+..+|..+++...........
T Consensus 116 ~~v~~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~ssP~v~--~~-~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~ 192 (394)
T PRK11138 116 VTVAGGKVYIGSEKGQVYALNAEDGEVAWQTKVAGEALSRPVVS--DG-LVLVHTSNGMLQALNESDGAVKWTVNLDVPS 192 (394)
T ss_pred cEEECCEEEEEcCCCEEEEEECCCCCCcccccCCCceecCCEEE--CC-EEEEECCCCEEEEEEccCCCEeeeecCCCCc
Confidence 34457788888899999999999999998876543221122221 22 5567788899999999888765444321110
Q ss_pred CC--ceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCceeEEecCCCC-----------CeEEEEEeCCEEEEEeCCCcE
Q 008820 338 KD--WRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKS-----------AVSTLAVCNGVLYSGSRDGTI 404 (552)
Q Consensus 338 ~~--~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~-----------~v~~l~~~~~~l~s~~~dg~i 404 (552)
.. ....++ ..+..++.++.+|.+..+|..+|+.++....... ...+....++.++.++.+|.+
T Consensus 193 ~~~~~~~sP~----v~~~~v~~~~~~g~v~a~d~~~G~~~W~~~~~~~~~~~~~~~~~~~~~sP~v~~~~vy~~~~~g~l 268 (394)
T PRK11138 193 LTLRGESAPA----TAFGGAIVGGDNGRVSAVLMEQGQLIWQQRISQPTGATEIDRLVDVDTTPVVVGGVVYALAYNGNL 268 (394)
T ss_pred ccccCCCCCE----EECCEEEEEcCCCEEEEEEccCChhhheeccccCCCccchhcccccCCCcEEECCEEEEEEcCCeE
Confidence 00 000111 1234577788899999999999988776532110 012223347788888899999
Q ss_pred EEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEECCCcEEEEeCCcceeeeecc--c-ceEEEEEecCCEEEEEe
Q 008820 405 RLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDKFMKSMQTH--K-GSVFAVFLEGKWLFTGG 481 (552)
Q Consensus 405 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~~~~~~~~~h--~-~~v~~v~~~~~~l~sgs 481 (552)
..+|..+|+.+........ .. ....+..++.++.+|.+..+|..+....++.. . ....+....+..|+.++
T Consensus 269 ~ald~~tG~~~W~~~~~~~---~~---~~~~~~~vy~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~sp~v~~g~l~v~~ 342 (394)
T PRK11138 269 VALDLRSGQIVWKREYGSV---ND---FAVDGGRIYLVDQNDRVYALDTRGGVELWSQSDLLHRLLTAPVLYNGYLVVGD 342 (394)
T ss_pred EEEECCCCCEEEeecCCCc---cC---cEEECCEEEEEcCCCeEEEEECCCCcEEEcccccCCCcccCCEEECCEEEEEe
Confidence 9999999998776643211 11 11246678888889999999965433332211 1 11122223577888899
Q ss_pred CCCeEEEEecCCCeeeeeeccCCCcccCcceEEEEEeCCeEEEEeCCCeEEEEEe
Q 008820 482 WDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQGKLFVGCADRTVKIALC 536 (552)
Q Consensus 482 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~l~s~s~Dg~v~iw~~ 536 (552)
.||.+++.|..+++......... ........+.+++|+.++.||.|+.++.
T Consensus 343 ~~G~l~~ld~~tG~~~~~~~~~~----~~~~s~P~~~~~~l~v~t~~G~l~~~~~ 393 (394)
T PRK11138 343 SEGYLHWINREDGRFVAQQKVDS----SGFLSEPVVADDKLLIQARDGTVYAITR 393 (394)
T ss_pred CCCEEEEEECCCCCEEEEEEcCC----CcceeCCEEECCEEEEEeCCceEEEEeC
Confidence 99999999999988776554321 1122233445789999999999998764
No 302
>PTZ00036 glycogen synthase kinase; Provisional
Probab=99.34 E-value=6.2e-13 Score=135.12 Aligned_cols=131 Identities=15% Similarity=0.202 Sum_probs=74.9
Q ss_pred hhhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cc
Q 008820 13 VAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QF 89 (552)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf 89 (552)
..|+. |+|+.+..... .....||+.|||||++ .| ...++.++|||||||+||||+||+ ||
T Consensus 209 ~vkL~DFGla~~~~~~~~---~~~~~~t~~y~aPE~~------~~--------~~~~~~~~DiwSlGvil~elltG~~pf 271 (440)
T PTZ00036 209 TLKLCDFGSAKNLLAGQR---SVSYICSRFYRAPELM------LG--------ATNYTTHIDLWSLGCIIAEMILGYPIF 271 (440)
T ss_pred ceeeeccccchhccCCCC---cccCCCCcCccCHHHh------cC--------CCCCCcHHHHHHHHHHHHHHHhCCCCC
Confidence 45666 66766654332 3457899999999998 22 234678999999999999999999 99
Q ss_pred hHHHhh-hh---hhccccCCCchhhhh-hhhHHH-HHHH--HHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 90 TKELID-YI---RCVSTKASDDNIACL-GMYMAW-MEKV--TYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 90 ~~~~~~-~~---~~~~~~~~~~~~~~~-~~~~~~-~~~~--~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
.+.... .+ ..+.+......+... ..+... ...+ .............++.+++.+||+++|.+||++.++..
T Consensus 272 ~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~ 350 (440)
T PTZ00036 272 SGQSSVDQLVRIIQVLGTPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALA 350 (440)
T ss_pred CCCChHHHHHHHHHHhCCCCHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhC
Confidence 654322 11 100111000000000 000000 0000 00000011123446889999999999999999887654
No 303
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=99.34 E-value=4.7e-13 Score=131.07 Aligned_cols=96 Identities=17% Similarity=0.152 Sum_probs=63.4
Q ss_pred hhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhhhhhhccccCCCchhh
Q 008820 32 LSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDYIRCVSTKASDDNIA 110 (552)
Q Consensus 32 ~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~~~~~~~~~~~~~~~~ 110 (552)
...+.||+.|||||++ . ...++.++|||||||+||||++|+ ||........ .
T Consensus 153 ~~~~~gt~~y~aPE~~------~---------~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~-------~----- 205 (327)
T cd05617 153 TSTFCGTPNYIAPEIL------R---------GEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPD-------M----- 205 (327)
T ss_pred eecccCCcccCCHHHH------C---------CCCCCchheeehhHHHHHHHHhCCCCCCccCCCcc-------c-----
Confidence 4567899999999999 2 255678999999999999999999 9964221100 0
Q ss_pred hhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchh
Q 008820 111 CLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLT 156 (552)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~ 156 (552)
.............+..........+.+++.+||+.+|.+|++..
T Consensus 206 --~~~~~~~~~~~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~ 249 (327)
T cd05617 206 --NTEDYLFQVILEKPIRIPRFLSVKASHVLKGFLNKDPKERLGCQ 249 (327)
T ss_pred --ccHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhccCHHHcCCCC
Confidence 00011111111111111222344588999999999999999864
No 304
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=99.34 E-value=5.7e-13 Score=130.21 Aligned_cols=89 Identities=17% Similarity=0.173 Sum_probs=62.5
Q ss_pred hhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhhhhhhccccCCCchhh
Q 008820 32 LSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDYIRCVSTKASDDNIA 110 (552)
Q Consensus 32 ~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~~~~~~~~~~~~~~~~ 110 (552)
...+.||+.|||||++ . ...++.++|||||||+||||+||+ ||.......+
T Consensus 158 ~~~~~gt~~y~aPE~~------~---------~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~------------- 209 (323)
T cd05615 158 TRTFCGTPDYIAPEII------A---------YQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDEL------------- 209 (323)
T ss_pred ccCccCCccccCHHHH------c---------CCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHHH-------------
Confidence 4567799999999999 2 245678999999999999999999 9976433311
Q ss_pred hhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchh
Q 008820 111 CLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLT 156 (552)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~ 156 (552)
...+.............++.+++.+||+++|.+|++..
T Consensus 210 --------~~~i~~~~~~~p~~~~~~~~~li~~~l~~~p~~R~~~~ 247 (323)
T cd05615 210 --------FQSIMEHNVSYPKSLSKEAVSICKGLMTKHPSKRLGCG 247 (323)
T ss_pred --------HHHHHhCCCCCCccCCHHHHHHHHHHcccCHhhCCCCC
Confidence 01111111111112344588999999999999999854
No 305
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.34 E-value=2.8e-13 Score=144.32 Aligned_cols=98 Identities=21% Similarity=0.217 Sum_probs=67.3
Q ss_pred hhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhhhhhhccccCCCchh
Q 008820 31 FLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDYIRCVSTKASDDNI 109 (552)
Q Consensus 31 ~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~~~~~~~~~~~~~~~ 109 (552)
....++||+.|||||++ .| ..+++++|||||||+||||+||+ ||.+.....+.
T Consensus 536 ~~~~~vGT~~Y~APE~l------~~---------~~~~~~~DiwSlG~il~ElltG~~pf~~~~~~~~~----------- 589 (669)
T cd05610 536 EGERILGTPDYLAPELL------LG---------KPHGPAVDWWALGVCLFEFLTGIPPFNDETPQQVF----------- 589 (669)
T ss_pred cCCceeeCccccCHHHc------CC---------CCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH-----------
Confidence 35567999999999999 33 45678999999999999999999 99764433111
Q ss_pred hhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHH
Q 008820 110 ACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKC 161 (552)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~ 161 (552)
..+.......+.. .......+.+++.+||..+|.+||++.++.+.
T Consensus 590 ------~~il~~~~~~p~~-~~~~~~~~~~~l~~lL~~dP~~R~ta~e~l~h 634 (669)
T cd05610 590 ------QNILNRDIPWPEG-EEKLSVNAQNAIEILLTMDPTKRAGLKELKQH 634 (669)
T ss_pred ------HHHHhcCCCCCcc-cccCCHHHHHHHHHHcccChhHCcCHHHHHhC
Confidence 0000000000000 01123348889999999999999999887664
No 306
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=99.33 E-value=5.2e-13 Score=131.03 Aligned_cols=92 Identities=16% Similarity=0.119 Sum_probs=62.0
Q ss_pred hhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhhhhhhccccCCCchhh
Q 008820 32 LSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDYIRCVSTKASDDNIA 110 (552)
Q Consensus 32 ~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~~~~~~~~~~~~~~~~ 110 (552)
.....||+.|||||++ .+ ...++.++|||||||+||+|+||+ ||.......+.
T Consensus 153 ~~~~~gt~~y~aPE~~------~~--------~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~------------ 206 (330)
T cd05586 153 TNTFCGTTEYLAPEVL------LD--------EKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMY------------ 206 (330)
T ss_pred ccCccCCccccCHHHH------cC--------CCCCCCccceeccccEEEEeccCCCCCCCCCHHHHH------------
Confidence 4567899999999998 22 123568999999999999999999 99764433211
Q ss_pred hhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhh
Q 008820 111 CLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTN 157 (552)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~ 157 (552)
..+.......+ ......++.+++.+||+.+|.+||+..+
T Consensus 207 -----~~i~~~~~~~~---~~~~~~~~~~li~~~L~~~P~~R~~~~~ 245 (330)
T cd05586 207 -----RNIAFGKVRFP---KNVLSDEGRQFVKGLLNRNPQHRLGAHR 245 (330)
T ss_pred -----HHHHcCCCCCC---CccCCHHHHHHHHHHcCCCHHHCCCCCC
Confidence 00000000000 0112345889999999999999997543
No 307
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=99.33 E-value=9e-13 Score=128.76 Aligned_cols=108 Identities=21% Similarity=0.324 Sum_probs=77.8
Q ss_pred hhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhhhhhhccccCCCchhh
Q 008820 32 LSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDYIRCVSTKASDDNIA 110 (552)
Q Consensus 32 ~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~~~~~~~~~~~~~~~~ 110 (552)
+..-.|+.-|||||+++.. -...++++|||||||+|+|||+||. ||......+++++-+.-..
T Consensus 547 ~~qp~gsilwmAPEvIRmq------------d~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqIifmVGrG~l---- 610 (678)
T KOG0193|consen 547 LEQPHGSLLWMAPEVIRMQ------------DDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQIIFMVGRGYL---- 610 (678)
T ss_pred cCCCccchhhhcHHHHhhc------------ccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhheEEEeccccc----
Confidence 4555789999999999521 1356779999999999999999999 9997777776654443210
Q ss_pred hhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHHhhhc
Q 008820 111 CLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELII 167 (552)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~~~~~ 167 (552)
++ ....... ....++++++..|+.+++++||...++...+..++.
T Consensus 611 ---~p-d~s~~~s--------~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~ 655 (678)
T KOG0193|consen 611 ---MP-DLSKIRS--------NCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLP 655 (678)
T ss_pred ---Cc-cchhhhc--------cCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhh
Confidence 00 1111111 122248999999999999999999999887777663
No 308
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.33 E-value=6.5e-13 Score=130.33 Aligned_cols=47 Identities=28% Similarity=0.520 Sum_probs=39.6
Q ss_pred hhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHH
Q 008820 32 LSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKEL 93 (552)
Q Consensus 32 ~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~ 93 (552)
.....||+.|||||++ .| ..++.++|||||||+||||+||+ ||....
T Consensus 159 ~~~~~g~~~y~aPE~~------~~---------~~~~~~~DiwslG~il~el~tg~~p~~~~~ 206 (331)
T cd06649 159 ANSFVGTRSYMSPERL------QG---------THYSVQSDIWSMGLSLVELAIGRYPIPPPD 206 (331)
T ss_pred cccCCCCcCcCCHhHh------cC---------CCCCchHhHHHHHHHHHHHHhCCCCCCCCC
Confidence 4567899999999999 32 45678999999999999999999 996533
No 309
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=99.33 E-value=1.2e-12 Score=125.71 Aligned_cols=92 Identities=17% Similarity=0.224 Sum_probs=61.4
Q ss_pred hhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhhhhhhccccCCCchhhh
Q 008820 33 SDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDYIRCVSTKASDDNIAC 111 (552)
Q Consensus 33 ~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~~~~~~~~~~~~~~~~~ 111 (552)
....||+.|||||++ . ...++.++|||||||+||||++|+ ||........
T Consensus 159 ~~~~~~~~y~aPE~~------~---------~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~-------------- 209 (285)
T cd05605 159 RGRVGTVGYMAPEVV------K---------NERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVK-------------- 209 (285)
T ss_pred ccccCCCCccCcHHh------c---------CCCCCccccchhHHHHHHHHHHCCCCCCCCchhhH--------------
Confidence 456899999999998 2 245678999999999999999999 9975332200
Q ss_pred hhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchh
Q 008820 112 LGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLT 156 (552)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~ 156 (552)
.......+...+..........+.+++.+||..+|.+||+..
T Consensus 210 ---~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~ 251 (285)
T cd05605 210 ---REEVERRVKEDQEEYSEKFSEAARSICRQLLTKDPGFRLGCR 251 (285)
T ss_pred ---HHHHHHHhhhcccccCcccCHHHHHHHHHHccCCHHHhcCCC
Confidence 001111111111111122344588999999999999999543
No 310
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=99.33 E-value=5.5e-13 Score=128.29 Aligned_cols=114 Identities=16% Similarity=0.158 Sum_probs=65.3
Q ss_pred hhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhh----hhhhccccCCC
Q 008820 32 LSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELID----YIRCVSTKASD 106 (552)
Q Consensus 32 ~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~----~~~~~~~~~~~ 106 (552)
.+...||+.|||||++ . ...++.++|||||||++|+|++|+ ||...... .+.........
T Consensus 164 ~~~~~~~~~y~aPE~~------~---------~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~ 228 (288)
T cd07863 164 LTPVVVTLWYRAPEVL------L---------QSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPE 228 (288)
T ss_pred CCCccccccccCchHh------h---------CCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCCh
Confidence 4567899999999998 2 245678999999999999999999 88543221 11111111111
Q ss_pred chhhhhh-hhHH-HHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 107 DNIACLG-MYMA-WMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 107 ~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
..|.... .... .....+.............+.+++.+||+.+|.+||++.++..
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~ 284 (288)
T cd07863 229 DDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQ 284 (288)
T ss_pred hhCcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 1110000 0000 0000000000111112334789999999999999999877653
No 311
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.33 E-value=5.1e-13 Score=131.22 Aligned_cols=106 Identities=16% Similarity=0.175 Sum_probs=78.1
Q ss_pred hcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchH
Q 008820 15 KVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTK 91 (552)
Q Consensus 15 ~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~ 91 (552)
||| |||..+..+. ...++|||.|||||..+| .|++..||||||+|++||+|+. ||..
T Consensus 186 KIGDLGLAtl~r~s~----aksvIGTPEFMAPEmYEE----------------~YnE~VDVYaFGMCmLEMvT~eYPYsE 245 (632)
T KOG0584|consen 186 KIGDLGLATLLRKSH----AKSVIGTPEFMAPEMYEE----------------NYNELVDVYAFGMCMLEMVTSEYPYSE 245 (632)
T ss_pred eecchhHHHHhhccc----cceeccCccccChHHHhh----------------hcchhhhhhhhhHHHHHHHhccCChhh
Confidence 777 8887776663 456999999999999854 3458999999999999999999 9965
Q ss_pred HHhhhhhhccccCCCchhhhhhhhHHHHHHHHHH--HhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHH
Q 008820 92 ELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYL--LENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKC 161 (552)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~ 161 (552)
=..+ ..++.++..- |........++++++|.+||.. ...|+++.++...
T Consensus 246 C~n~--------------------AQIYKKV~SGiKP~sl~kV~dPevr~fIekCl~~-~~~R~sa~eLL~d 296 (632)
T KOG0584|consen 246 CTNP--------------------AQIYKKVTSGIKPAALSKVKDPEVREFIEKCLAT-KSERLSAKELLKD 296 (632)
T ss_pred hCCH--------------------HHHHHHHHcCCCHHHhhccCCHHHHHHHHHHhcC-chhccCHHHHhhC
Confidence 3222 2344443211 2223334566799999999998 9999998876653
No 312
>PHA03207 serine/threonine kinase US3; Provisional
Probab=99.32 E-value=7.3e-13 Score=133.00 Aligned_cols=132 Identities=12% Similarity=0.161 Sum_probs=75.4
Q ss_pred hhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cch
Q 008820 14 AKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFT 90 (552)
Q Consensus 14 ~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~ 90 (552)
+|+. |+++.+...........+.||+.|||||++ . ...++.++|||||||+||||++|+ ||.
T Consensus 224 ~~l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~------~---------~~~~~~~~DvwslGvil~el~~g~~pf~ 288 (392)
T PHA03207 224 AVLGDFGAACKLDAHPDTPQCYGWSGTLETNSPELL------A---------LDPYCAKTDIWSAGLVLFEMSVKNVTLF 288 (392)
T ss_pred EEEccCccccccCcccccccccccccccCccCHhHh------c---------CCCCCchhhHHHHHHHHHHHHHCCCCCC
Confidence 4444 556665554433334567899999999999 2 245678999999999999999999 995
Q ss_pred HHHhh----hhhhc--cccCCCchhhhhhhhHHHHHHHHHH----------Hhh-hhcCccccHHHHHHhhcccCCCCCc
Q 008820 91 KELID----YIRCV--STKASDDNIACLGMYMAWMEKVTYL----------LEN-KFGSEFVSLQLMFCQCLNFDPGCRP 153 (552)
Q Consensus 91 ~~~~~----~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~-~~~~~~~~l~~~~~~~l~~~p~~R~ 153 (552)
+.... .+..+ ..+..+..+...... ......... +.. .......++.+++.+||..+|.+||
T Consensus 289 ~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rp 367 (392)
T PHA03207 289 GKQVKSSSSQLRSIIRCMQVHPLEFPQNGST-NLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRP 367 (392)
T ss_pred CCCCCCcHHHHHHHHHHhccCccccCCccch-hHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCC
Confidence 43211 11000 000011111000000 000000000 000 0011234588899999999999999
Q ss_pred chhhHHHH
Q 008820 154 LLTNVWKC 161 (552)
Q Consensus 154 ~~~~~~~~ 161 (552)
++.++...
T Consensus 368 sa~e~l~~ 375 (392)
T PHA03207 368 SAQDILSL 375 (392)
T ss_pred CHHHHhhC
Confidence 99887664
No 313
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.32 E-value=4.1e-13 Score=128.14 Aligned_cols=100 Identities=13% Similarity=0.122 Sum_probs=73.0
Q ss_pred cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhhh
Q 008820 18 CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDY 96 (552)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~~ 96 (552)
||||.+..... +=+|+|||.|.|||++.++.+ +..+|.||||+++||||||+ ||.+....
T Consensus 565 GFAKki~~g~K---TwTFcGTpEYVAPEIILnKGH---------------D~avDyWaLGIli~ELL~G~pPFs~~dpm- 625 (732)
T KOG0614|consen 565 GFAKKIGSGRK---TWTFCGTPEYVAPEIILNKGH---------------DRAVDYWALGILIYELLTGSPPFSGVDPM- 625 (732)
T ss_pred hhHHHhccCCc---eeeecCCcccccchhhhccCc---------------chhhHHHHHHHHHHHHHcCCCCCCCCchH-
Confidence 78888888776 568999999999999954433 47899999999999999999 99886654
Q ss_pred hhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcc
Q 008820 97 IRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPL 154 (552)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~ 154 (552)
.+|..+...+-... .+........+++.++...+|.+|-.
T Consensus 626 ----------------ktYn~ILkGid~i~--~Pr~I~k~a~~Lik~LCr~~P~ERLG 665 (732)
T KOG0614|consen 626 ----------------KTYNLILKGIDKIE--FPRRITKTATDLIKKLCRDNPTERLG 665 (732)
T ss_pred ----------------HHHHHHHhhhhhhh--cccccchhHHHHHHHHHhcCcHhhhc
Confidence 12333333221111 11223344778999999999999966
No 314
>KOG1523 consensus Actin-related protein Arp2/3 complex, subunit ARPC1/p41-ARC [Cytoskeleton]
Probab=99.32 E-value=6.2e-10 Score=100.08 Aligned_cols=243 Identities=15% Similarity=0.165 Sum_probs=170.3
Q ss_pred EEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEE
Q 008820 287 TFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKA 366 (552)
Q Consensus 287 ~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~i 366 (552)
.+..-..+|+|.+|+++.. .++.+.....|.||.......-....++..|.. .. ....+++..+.|++|+.|..-++
T Consensus 5 ~~~~~~~pitchAwn~drt-~iAv~~~~~evhiy~~~~~~~w~~~htls~Hd~-~v-tgvdWap~snrIvtcs~drnayV 81 (361)
T KOG1523|consen 5 VFHRLLEPITCHAWNSDRT-QIAVSPNNHEVHIYSMLGADLWEPAHTLSEHDK-IV-TGVDWAPKSNRIVTCSHDRNAYV 81 (361)
T ss_pred EeeeccCceeeeeecCCCc-eEEeccCCceEEEEEecCCCCceeceehhhhCc-ce-eEEeecCCCCceeEccCCCCccc
Confidence 3444557899999998655 668888899999999887665555555555543 22 23678888889999999999999
Q ss_pred EECCC-C--ceeEEecCCCCCeEEEEEe--CCEEEEEeCCCcEEEEECCCCcee---EEEecCCCCceEEEEEEcCCCCE
Q 008820 367 WSLLD-G--TLSCTMSGHKSAVSTLAVC--NGVLYSGSRDGTIRLWSLSDHSLL---TVLEEDSSGAVSSVLSLTAVQHT 438 (552)
Q Consensus 367 wd~~~-~--~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~---~~~~~~~~~~~~~~~~~s~~~~~ 438 (552)
|.... + ++...+..+....+++.|+ ++.|++|+.-..|.+|-+.....- +.++......+.+ +.|.|++-+
T Consensus 82 w~~~~~~~WkptlvLlRiNrAAt~V~WsP~enkFAVgSgar~isVcy~E~ENdWWVsKhikkPirStv~s-ldWhpnnVL 160 (361)
T KOG1523|consen 82 WTQPSGGTWKPTLVLLRINRAATCVKWSPKENKFAVGSGARLISVCYYEQENDWWVSKHIKKPIRSTVTS-LDWHPNNVL 160 (361)
T ss_pred cccCCCCeeccceeEEEeccceeeEeecCcCceEEeccCccEEEEEEEecccceehhhhhCCccccceee-eeccCCcce
Confidence 99843 3 3444566689999999999 569999999999999987654321 2233333344454 799999999
Q ss_pred EEEEECCCcEEEEeC-----C---------------cceeeeecccceEEEEEe--cCCEEEEEeCCCeEEEEecCCCee
Q 008820 439 LVVSHESGSIKVWRN-----D---------------KFMKSMQTHKGSVFAVFL--EGKWLFTGGWDKTVSVQELAGDEF 496 (552)
Q Consensus 439 l~~g~~dg~i~iwd~-----~---------------~~~~~~~~h~~~v~~v~~--~~~~l~sgs~dg~i~iwd~~~~~~ 496 (552)
+++|+.|+..+++.. . .+...+....+.+..+.| +|..|+-.+.|..+.+=|......
T Consensus 161 laaGs~D~k~rVfSayIK~Vdekpap~pWgsk~PFG~lm~E~~~~ggwvh~v~fs~sG~~lawv~Hds~v~~~da~~p~~ 240 (361)
T KOG1523|consen 161 LAAGSTDGKCRVFSAYIKGVDEKPAPTPWGSKMPFGQLMSEASSSGGWVHGVLFSPSGNRLAWVGHDSTVSFVDAAGPSE 240 (361)
T ss_pred ecccccCcceeEEEEeeeccccCCCCCCCccCCcHHHHHHhhccCCCceeeeEeCCCCCEeeEecCCCceEEeecCCCch
Confidence 999999999999951 1 112233345567888877 799999999999999999876643
Q ss_pred eeeeccCCCcccCcceEEEEEe-CCeEEEEeCCCeEEEEEec
Q 008820 497 EEDVIPTGAIPCGSVITALLYW-QGKLFVGCADRTVKIALCN 537 (552)
Q Consensus 497 ~~~~~~~~~~~~~~~v~~l~~~-~~~l~s~s~Dg~v~iw~~~ 537 (552)
........ .-+..++.|- +..++.++.|..=.++..+
T Consensus 241 ~v~~~~~~----~lP~ls~~~ise~~vv~ag~~c~P~lf~~~ 278 (361)
T KOG1523|consen 241 RVQSVATA----QLPLLSVSWISENSVVAAGYDCGPVLFVTD 278 (361)
T ss_pred hccchhhc----cCCceeeEeecCCceeecCCCCCceEEEec
Confidence 22222211 2334555554 5567777777544444444
No 315
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=99.32 E-value=4.9e-13 Score=132.50 Aligned_cols=118 Identities=15% Similarity=0.228 Sum_probs=71.9
Q ss_pred hhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cch
Q 008820 14 AKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFT 90 (552)
Q Consensus 14 ~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~ 90 (552)
.|+. |+++.+..... ......||+.|||||++..... .....+.++|||||||+||||++|+ ||.
T Consensus 207 ~kL~DfG~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~----------~~~~~~~~~DvwslGvil~el~~g~~pf~ 274 (353)
T PLN00034 207 VKIADFGVSRILAQTMD--PCNSSVGTIAYMSPERINTDLN----------HGAYDGYAGDIWSLGVSILEFYLGRFPFG 274 (353)
T ss_pred EEEcccccceecccccc--cccccccCccccCccccccccc----------cCcCCCcchhHHHHHHHHHHHHhCCCCCC
Confidence 4444 55555543321 1355789999999999822111 1123346899999999999999999 997
Q ss_pred HHHhhhhhhccccCCCchhhhhhhhHHHHHHH-HHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHH
Q 008820 91 KELIDYIRCVSTKASDDNIACLGMYMAWMEKV-TYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKC 161 (552)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~ 161 (552)
..... .|. ...... .............++.+++.+||+.+|++||++.++.+.
T Consensus 275 ~~~~~------------~~~------~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~h 328 (353)
T PLN00034 275 VGRQG------------DWA------SLMCAICMSQPPEAPATASREFRHFISCCLQREPAKRWSAMQLLQH 328 (353)
T ss_pred CCCCc------------cHH------HHHHHHhccCCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 32211 000 000000 000111112234469999999999999999998877653
No 316
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=99.32 E-value=1.1e-12 Score=124.36 Aligned_cols=97 Identities=13% Similarity=0.205 Sum_probs=67.6
Q ss_pred hccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhh-CC-CchHHHhhhhhhccccCCCchhhh
Q 008820 34 DFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE-QFTKELIDYIRCVSTKASDDNIAC 111 (552)
Q Consensus 34 ~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~llt-g~-pf~~~~~~~~~~~~~~~~~~~~~~ 111 (552)
...+++.|+|||++ . ...++.++|||||||+||||++ |. ||.+.....+.
T Consensus 164 ~~~~~~~y~aPE~~------~---------~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~------------- 215 (263)
T cd05052 164 GAKFPIKWTAPESL------A---------YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY------------- 215 (263)
T ss_pred CCCCccccCCHHHh------c---------cCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHH-------------
Confidence 34557889999998 2 2456789999999999999998 88 99664333110
Q ss_pred hhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHHhh
Q 008820 112 LGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIREL 165 (552)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~~~ 165 (552)
...... .........+.++.+++.+|++.+|++||++.++.+.+..+
T Consensus 216 ----~~~~~~---~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 216 ----ELLEKG---YRMERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFETM 262 (263)
T ss_pred ----HHHHCC---CCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence 000000 00111122345699999999999999999999998887654
No 317
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=99.32 E-value=1.4e-12 Score=124.86 Aligned_cols=119 Identities=13% Similarity=0.180 Sum_probs=79.0
Q ss_pred hhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhh-CC-Cc
Q 008820 14 AKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE-QF 89 (552)
Q Consensus 14 ~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~llt-g~-pf 89 (552)
+|+. |+++.+...+.....+...|++.|||||++ . ...+++++|||||||++|||++ |+ ||
T Consensus 148 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~------~---------~~~~~~~~Dv~slG~il~el~t~g~~p~ 212 (279)
T cd05111 148 VQIADFGVADLLYPDDKKYFYSEHKTPIKWMALESI------L---------FGRYTHQSDVWSYGVTVWEMMSYGAEPY 212 (279)
T ss_pred EEEcCCccceeccCCCcccccCCCCCcccccCHHHh------c---------cCCcCchhhHHHHHHHHHHHHcCCCCCC
Confidence 4444 556655444333334567788999999998 2 2557789999999999999998 99 99
Q ss_pred hHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHHhhhc
Q 008820 90 TKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELII 167 (552)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~~~~~ 167 (552)
.+.....+. .+...-. ...........+.+++.+|+..+|.+||++.++.+.+..+..
T Consensus 213 ~~~~~~~~~------------------~~~~~~~--~~~~~~~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~ 270 (279)
T cd05111 213 AGMRPHEVP------------------DLLEKGE--RLAQPQICTIDVYMVMVKCWMIDENVRPTFKELANEFTRMAR 270 (279)
T ss_pred CCCCHHHHH------------------HHHHCCC--cCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHh
Confidence 654322110 0000000 000111223457889999999999999999999888877653
No 318
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=99.32 E-value=7.5e-13 Score=126.49 Aligned_cols=96 Identities=14% Similarity=0.129 Sum_probs=63.6
Q ss_pred hhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhhhhhhccccCCCchhhh
Q 008820 33 SDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDYIRCVSTKASDDNIAC 111 (552)
Q Consensus 33 ~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~~~~~~~~~~~~~~~~~ 111 (552)
....||+.|||||++ . ...++.++|||||||+||||++|+ ||....... .
T Consensus 152 ~~~~~~~~y~aPE~~------~---------~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~-~------------- 202 (277)
T cd05607 152 TQRAGTNGYMAPEIL------K---------EEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKV-A------------- 202 (277)
T ss_pred eccCCCCCccCHHHH------c---------cCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchh-h-------------
Confidence 456799999999998 2 245778999999999999999999 996422110 0
Q ss_pred hhhhHHHHHHHHH-HHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 112 LGMYMAWMEKVTY-LLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 112 ~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
.......... ......+....++.+++.+||+.+|.+||++.++.+
T Consensus 203 ---~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~ 249 (277)
T cd05607 203 ---KEELKRRTLEDEVKFEHQNFTEESKDICRLFLAKKPEDRLGSREKND 249 (277)
T ss_pred ---HHHHHHHhhccccccccccCCHHHHHHHHHHhccCHhhCCCCccchh
Confidence 0000000000 000011123445899999999999999999876543
No 319
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=99.32 E-value=7.9e-13 Score=129.94 Aligned_cols=100 Identities=17% Similarity=0.183 Sum_probs=66.2
Q ss_pred hhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhhhhhhccccCCCchhh
Q 008820 32 LSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDYIRCVSTKASDDNIA 110 (552)
Q Consensus 32 ~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~~~~~~~~~~~~~~~~ 110 (552)
.....||+.|||||++ .+ ..++.++|||||||+||||++|+ ||...+...+.
T Consensus 155 ~~~~~gt~~y~aPE~~------~~---------~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~------------ 207 (333)
T cd05600 155 ANSVVGSPDYMAPEVL------RG---------KGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETW------------ 207 (333)
T ss_pred cCCcccCccccChhHh------cC---------CCCCCccceecchHHHhhhhhCCCCCCCCCHHHHH------------
Confidence 4567899999999999 33 46778999999999999999999 99764433110
Q ss_pred hhhhhHHHHHHHHHHHhh--hhcCccccHHHHHHhhcccCCCCCcchhhHHHH
Q 008820 111 CLGMYMAWMEKVTYLLEN--KFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKC 161 (552)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~ 161 (552)
.....+.. ....+.. .......++.+++.+||..+|.+||++.++.+.
T Consensus 208 --~~i~~~~~-~~~~~~~~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h 257 (333)
T cd05600 208 --ENLKYWKE-TLQRPVYDDPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNH 257 (333)
T ss_pred --HHHHhccc-cccCCCCCccccccCHHHHHHHHHHhhChhhhcCCHHHHHhC
Confidence 00000000 0000000 001124458899999999999999998776653
No 320
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=99.32 E-value=1.1e-12 Score=124.33 Aligned_cols=111 Identities=15% Similarity=0.138 Sum_probs=72.4
Q ss_pred cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhh-CC-CchHHHhh
Q 008820 18 CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE-QFTKELID 95 (552)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~llt-g~-pf~~~~~~ 95 (552)
|++..+...... ......+++.|||||++ . ...+++++|||||||++|+|+| |+ ||......
T Consensus 148 g~~~~~~~~~~~-~~~~~~~~~~y~aPE~~------~---------~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~ 211 (261)
T cd05072 148 GLARVIEDNEYT-AREGAKFPIKWTAPEAI------N---------FGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNS 211 (261)
T ss_pred ccceecCCCcee-ccCCCccceecCCHHHh------c---------cCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHH
Confidence 445554433221 23445678899999998 2 2456789999999999999999 89 99653322
Q ss_pred hhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHHh
Q 008820 96 YIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRE 164 (552)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~~ 164 (552)
.+. ..+... ...+.......++.+++.+|+..+|++||++.++.+.+..
T Consensus 212 ~~~-----------------~~~~~~---~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 260 (261)
T cd05072 212 DVM-----------------SALQRG---YRMPRMENCPDELYDIMKTCWKEKAEERPTFDYLQSVLDD 260 (261)
T ss_pred HHH-----------------HHHHcC---CCCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 110 000000 0001111233458899999999999999999998887654
No 321
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.31 E-value=5.3e-13 Score=140.87 Aligned_cols=117 Identities=19% Similarity=0.325 Sum_probs=75.3
Q ss_pred hhhcc--cccccccccc--hhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-
Q 008820 13 VAKVG--CVGSRICDKE--VGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE- 87 (552)
Q Consensus 13 ~~~~~--~~~~~~~~~~--~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~- 87 (552)
+-|-+ |-|..|.... +...+.+.+|||+|||||++ .|.+ ..|+ +-+.|||||||+.+||+||+
T Consensus 1372 ~iK~~DFGsa~ki~~~~~~~~~el~~~~GT~~YMAPEvi------t~t~-----~kG~-~~A~DiWslGCVVlEM~tGkr 1439 (1509)
T KOG4645|consen 1372 LIKYGDFGSAVKIKNNAQTMPGELQSMMGTPMYMAPEVI------TGTK-----GKGH-GGAADIWSLGCVVLEMATGKR 1439 (1509)
T ss_pred cEEeecccceeEecCchhcCCHHHHhhcCCchhcCchhh------cccc-----cCCC-CcchhhhcccceEEEeecCCC
Confidence 44444 3344444432 33568899999999999999 4411 1122 35799999999999999999
Q ss_pred CchHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 88 QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 88 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
|+..-.. +|++. +.....+.|..|.. ...+-.++|.+||+.||..|.++.++.+
T Consensus 1440 PW~~~dn-------------e~aIM--y~V~~gh~Pq~P~~----ls~~g~dFle~Cl~~dP~~Rw~~~qlle 1493 (1509)
T KOG4645|consen 1440 PWAELDN-------------EWAIM--YHVAAGHKPQIPER----LSSEGRDFLEHCLEQDPKMRWTASQLLE 1493 (1509)
T ss_pred chhhccc-------------hhHHH--hHHhccCCCCCchh----hhHhHHHHHHHHHhcCchhhhHHHHHHH
Confidence 9954221 23321 22222333333322 4445789999999999999966655444
No 322
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=99.31 E-value=1.4e-12 Score=124.10 Aligned_cols=116 Identities=17% Similarity=0.209 Sum_probs=73.4
Q ss_pred hhhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhh-CC-C
Q 008820 13 VAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE-Q 88 (552)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~llt-g~-p 88 (552)
..|.. |+++.+...+.........+++.|||||++ ..+.+++++|||||||++|||+| |+ |
T Consensus 149 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~---------------~~~~~~~~~Dv~slG~il~ellt~g~~p 213 (269)
T cd05044 149 VVKIGDFGLARDIYKSDYYRKEGEGLLPVRWMAPESL---------------LDGKFTTQSDVWSFGVLMWEILTLGQQP 213 (269)
T ss_pred ceEECCcccccccccccccccCcccCCCccccCHHHH---------------ccCCcccchhHHHHHHHHHHHHHcCCCC
Confidence 34554 455544333222223345678999999998 23567789999999999999998 99 9
Q ss_pred chHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHH
Q 008820 89 FTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIR 163 (552)
Q Consensus 89 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~ 163 (552)
|.......+. ...... .........+..+.+++.+||+.+|.+||++.++.+.+.
T Consensus 214 ~~~~~~~~~~-----------------~~~~~~---~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 268 (269)
T cd05044 214 YPALNNQEVL-----------------QHVTAG---GRLQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQ 268 (269)
T ss_pred CcccCHHHHH-----------------HHHhcC---CccCCcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 9653322110 000000 000000112234889999999999999999999887654
No 323
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=99.31 E-value=1.2e-12 Score=126.82 Aligned_cols=118 Identities=14% Similarity=0.235 Sum_probs=74.5
Q ss_pred hhhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhh-CC-C
Q 008820 13 VAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE-Q 88 (552)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~llt-g~-p 88 (552)
.+|.. |+++.+.............+++.|||||++ . ...++.++|||||||++|||++ |. |
T Consensus 179 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~------~---------~~~~~~~~DiwslGvil~el~t~g~~p 243 (302)
T cd05055 179 IVKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESI------F---------NCVYTFESDVWSYGILLWEIFSLGSNP 243 (302)
T ss_pred eEEECCCcccccccCCCceeecCCCCcccccCCHhhh------c---------cCCCCcHhHHHHHHHHHHHHHhCCCCC
Confidence 34554 445544333211122345678999999998 2 2456789999999999999998 99 9
Q ss_pred chHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHH-HHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHHhh
Q 008820 89 FTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTY-LLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIREL 165 (552)
Q Consensus 89 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~~~ 165 (552)
|....... ........ ............+.+++.+||..+|++||++.++.+.+.++
T Consensus 244 ~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~ 301 (302)
T cd05055 244 YPGMPVDS--------------------KFYKLIKEGYRMAQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ 301 (302)
T ss_pred cCCCCchH--------------------HHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence 86532210 00000000 00001112234589999999999999999999998887653
No 324
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=99.31 E-value=1.2e-12 Score=123.55 Aligned_cols=106 Identities=20% Similarity=0.284 Sum_probs=69.9
Q ss_pred cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhhh
Q 008820 18 CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDY 96 (552)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~~ 96 (552)
|+++.+..... ......|++.|+|||++ . ....++++|+|||||++|+|++|+ ||.......
T Consensus 146 ~~~~~~~~~~~--~~~~~~~~~~y~aPE~~------~---------~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~ 208 (256)
T cd08529 146 GVAKLLSDNTN--FANTIVGTPYYLSPELC------E---------DKPYNEKSDVWALGVVLYECCTGKHPFDANNQGA 208 (256)
T ss_pred ccceeccCccc--hhhccccCccccCHHHh------c---------CCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 44444444322 24556899999999998 2 245678999999999999999999 996544221
Q ss_pred hhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 97 IRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
+. +..... ...........++.+++.+|++.+|++||++.++.+
T Consensus 209 ~~-----------------~~~~~~---~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~ 252 (256)
T cd08529 209 LI-----------------LKIIRG---VFPPVSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLR 252 (256)
T ss_pred HH-----------------HHHHcC---CCCCCccccCHHHHHHHHHHccCCcccCcCHHHHhh
Confidence 10 000000 000000112335899999999999999999988765
No 325
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=99.31 E-value=1e-12 Score=128.66 Aligned_cols=97 Identities=18% Similarity=0.179 Sum_probs=62.1
Q ss_pred hhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhhhhhhccccCCCchhh
Q 008820 32 LSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDYIRCVSTKASDDNIA 110 (552)
Q Consensus 32 ~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~~~~~~~~~~~~~~~~ 110 (552)
...+.||+.|||||++ . ...++.++|||||||++|||++|+ ||........ ....
T Consensus 153 ~~~~~gt~~y~aPE~~------~---------~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~----~~~~----- 208 (329)
T cd05618 153 TSTFCGTPNYIAPEIL------R---------GEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDN----PDQN----- 208 (329)
T ss_pred cccccCCccccCHHHH------c---------CCCCCCccceecccHHHHHHhhCCCCCccCCCcCC----cccc-----
Confidence 4567899999999999 2 255678999999999999999999 9953211100 0000
Q ss_pred hhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcch
Q 008820 111 CLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLL 155 (552)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~ 155 (552)
................+......+.+++.+||+.+|.+||+.
T Consensus 209 ---~~~~~~~~i~~~~~~~p~~~~~~~~~ll~~~L~~dP~~R~~~ 250 (329)
T cd05618 209 ---TEDYLFQVILEKQIRIPRSLSVKAASVLKSFLNKDPKERLGC 250 (329)
T ss_pred ---cHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHhcCCHHHcCCC
Confidence 000111111111111112234558899999999999999985
No 326
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.31 E-value=1.2e-12 Score=130.22 Aligned_cols=61 Identities=20% Similarity=0.436 Sum_probs=46.0
Q ss_pred hhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cch
Q 008820 14 AKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFT 90 (552)
Q Consensus 14 ~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~ 90 (552)
.|+. |+++...... ......||+.|||||++ .| ..++.++|||||||+||||++|+ ||.
T Consensus 165 ~kL~DfG~a~~~~~~~---~~~~~~~t~~y~aPE~~------~~---------~~~~~~~DiwSlG~il~ell~g~~pf~ 226 (364)
T cd07875 165 LKILDFGLARTAGTSF---MMTPYVVTRYYRAPEVI------LG---------MGYKENVDIWSVGCIMGEMIKGGVLFP 226 (364)
T ss_pred EEEEeCCCccccCCCC---cccCCcccCCcCCHHHH------hC---------CCCCchhhHHhHHHHHHHHHhCCCCCC
Confidence 4555 5555443332 24567899999999999 22 45678999999999999999999 996
Q ss_pred HH
Q 008820 91 KE 92 (552)
Q Consensus 91 ~~ 92 (552)
+.
T Consensus 227 ~~ 228 (364)
T cd07875 227 GT 228 (364)
T ss_pred CC
Confidence 53
No 327
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=99.31 E-value=1.2e-12 Score=128.19 Aligned_cols=97 Identities=18% Similarity=0.208 Sum_probs=63.0
Q ss_pred hhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhhhhhhccccCCCchhh
Q 008820 32 LSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDYIRCVSTKASDDNIA 110 (552)
Q Consensus 32 ~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~~~~~~~~~~~~~~~~ 110 (552)
...+.||+.|||||++ . ...+++++|+|||||++|||+||+ ||+..... .....
T Consensus 153 ~~~~~gt~~y~aPE~~------~---------~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~-----~~~~~----- 207 (329)
T cd05588 153 TSTFCGTPNYIAPEIL------R---------GEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMS-----DNPDQ----- 207 (329)
T ss_pred cccccCCccccCHHHH------c---------CCCCCCccceechHHHHHHHHHCCCCccccccc-----ccccc-----
Confidence 4567899999999999 2 245678999999999999999999 99642211 00000
Q ss_pred hhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcch
Q 008820 111 CLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLL 155 (552)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~ 155 (552)
.......................++.+++.+||+.+|.+|++.
T Consensus 208 --~~~~~~~~~~~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~ 250 (329)
T cd05588 208 --NTEDYLFQVILEKQIRIPRSLSVKASSVLKGFLNKDPKERLGC 250 (329)
T ss_pred --cchHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhccCHHHcCCC
Confidence 0000111111111111122234568999999999999999984
No 328
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=99.31 E-value=9.7e-13 Score=125.79 Aligned_cols=93 Identities=20% Similarity=0.224 Sum_probs=64.3
Q ss_pred ccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhh-CC-CchHHHhhhhhhccccCCCchhhhh
Q 008820 35 FLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE-QFTKELIDYIRCVSTKASDDNIACL 112 (552)
Q Consensus 35 ~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~llt-g~-pf~~~~~~~~~~~~~~~~~~~~~~~ 112 (552)
..+++.|||||++ . ...+++++|||||||++|||++ |. ||.......+.
T Consensus 181 ~~~~~~y~aPE~~------~---------~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~~~-------------- 231 (277)
T cd05062 181 GLLPVRWMSPESL------K---------DGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVL-------------- 231 (277)
T ss_pred CccCHhhcChhHh------h---------cCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHH--------------
Confidence 4568899999998 2 2456789999999999999999 67 98654333111
Q ss_pred hhhHHHHHHHHHHH-hhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHH
Q 008820 113 GMYMAWMEKVTYLL-ENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIR 163 (552)
Q Consensus 113 ~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~ 163 (552)
....... ..........+.+++.+||+.+|.+||++.++.+.+.
T Consensus 232 -------~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~ 276 (277)
T cd05062 232 -------RFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 276 (277)
T ss_pred -------HHHHcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhh
Confidence 0000000 0011123445899999999999999999998877653
No 329
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=99.31 E-value=1.4e-12 Score=130.45 Aligned_cols=119 Identities=16% Similarity=0.215 Sum_probs=76.3
Q ss_pred hhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhh-CC-Cc
Q 008820 14 AKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE-QF 89 (552)
Q Consensus 14 ~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~llt-g~-pf 89 (552)
+|+. |+++.+.............|++.|||||++ . ...+++++|||||||+||||++ |. ||
T Consensus 276 ~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~------~---------~~~~~~~~DiwSlGvil~ellt~g~~P~ 340 (400)
T cd05105 276 VKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESI------F---------DNLYTTLSDVWSYGILLWEIFSLGGTPY 340 (400)
T ss_pred EEEEeCCcceeccccccccccCCcCCCcceEChhhh------c---------CCCCCchhhHHHHHHHHHHHHHCCCCCC
Confidence 4554 555544333222223445688999999998 2 2456789999999999999997 88 99
Q ss_pred hHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHHhhh
Q 008820 90 TKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELI 166 (552)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~~~~ 166 (552)
......... ....... ............+.+++.+||+.+|++||+..++.+.+.++.
T Consensus 341 ~~~~~~~~~----------------~~~~~~~---~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~ 398 (400)
T cd05105 341 PGMIVDSTF----------------YNKIKSG---YRMAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLL 398 (400)
T ss_pred cccchhHHH----------------HHHHhcC---CCCCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHc
Confidence 653221000 0000000 000011123345889999999999999999999999888765
No 330
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=99.30 E-value=1.2e-12 Score=125.33 Aligned_cols=96 Identities=10% Similarity=0.149 Sum_probs=65.7
Q ss_pred hhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhh-CC-CchHHHhhhhhhccccCCCchhh
Q 008820 33 SDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE-QFTKELIDYIRCVSTKASDDNIA 110 (552)
Q Consensus 33 ~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~llt-g~-pf~~~~~~~~~~~~~~~~~~~~~ 110 (552)
....+++.|+|||++ . ...+++++|||||||++|||++ |+ ||.........
T Consensus 182 ~~~~~~~~y~aPE~~------~---------~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~------------ 234 (280)
T cd05092 182 GRTMLPIRWMPPESI------L---------YRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAI------------ 234 (280)
T ss_pred CCccccccccCHHHh------c---------cCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHHH------------
Confidence 445568899999998 2 2556789999999999999998 88 99543222100
Q ss_pred hhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHH
Q 008820 111 CLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIR 163 (552)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~ 163 (552)
...... .+.......+.++.+++.+||+.+|.+||++.++.+.+.
T Consensus 235 -----~~~~~~---~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~ 279 (280)
T cd05092 235 -----ECITQG---RELERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQ 279 (280)
T ss_pred -----HHHHcC---ccCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHh
Confidence 000000 000111123456899999999999999999999887653
No 331
>KOG4547 consensus WD40 repeat-containing protein [General function prediction only]
Probab=99.30 E-value=4.2e-10 Score=109.35 Aligned_cols=203 Identities=16% Similarity=0.232 Sum_probs=146.2
Q ss_pred CCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCccccccccCCCce
Q 008820 262 GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWR 341 (552)
Q Consensus 262 ~~~l~s~s~dg~I~iwd~~~~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~ 341 (552)
..++|....||.+|+||..+++....+... +..+..++-..|.+..............
T Consensus 5 ~~~~A~~~~~g~l~iw~t~~~~~~~e~~p~-----------------~~~s~t~~~~~w~L~~~~s~~k~~~~~~----- 62 (541)
T KOG4547|consen 5 LDYFALSTGDGRLRIWDTAKNQLQQEFAPI-----------------ASLSGTCTYTKWGLSADYSPMKWLSLEK----- 62 (541)
T ss_pred hheEeecCCCCeEEEEEccCceeeeeeccc-----------------hhccCcceeEEEEEEeccchHHHHhHHH-----
Confidence 568999999999999999988877666431 1111122233333221111111111100
Q ss_pred eeeEEEEeeCCCEEEEeeCCCcEEEEECCCCceeEEec--CCCCCeEEEEEeC--CEEEEEeCCCcEEEEECCCCceeEE
Q 008820 342 YSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMS--GHKSAVSTLAVCN--GVLYSGSRDGTIRLWSLSDHSLLTV 417 (552)
Q Consensus 342 ~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~--~h~~~v~~l~~~~--~~l~s~~~dg~i~iwd~~~~~~~~~ 417 (552)
....+-+...++-|...|.|.+|++..++....+. .|.+.|+++.+++ +.|.+++.|+.+..|+....+.+..
T Consensus 63 ---~~~~s~~t~~lvlgt~~g~v~~ys~~~g~it~~~st~~h~~~v~~~~~~~~~~ciyS~~ad~~v~~~~~~~~~~~~~ 139 (541)
T KOG4547|consen 63 ---AKKASLDTSMLVLGTPQGSVLLYSVAGGEITAKLSTDKHYGNVNEILDAQRLGCIYSVGADLKVVYILEKEKVIIRI 139 (541)
T ss_pred ---HhhccCCceEEEeecCCccEEEEEecCCeEEEEEecCCCCCcceeeecccccCceEecCCceeEEEEecccceeeee
Confidence 01122344588999999999999999999988875 6999999999884 4999999999999999999999888
Q ss_pred EecCCCCceEEEEEEcCCCCEEEEEECCCcEEEEeCC--cceeeeecccceEEEEEe--c-----CCEEEE-EeCCCeEE
Q 008820 418 LEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRND--KFMKSMQTHKGSVFAVFL--E-----GKWLFT-GGWDKTVS 487 (552)
Q Consensus 418 ~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~--~~~~~~~~h~~~v~~v~~--~-----~~~l~s-gs~dg~i~ 487 (552)
+...... +.+ ++++||+..+++++. .|++||+. +.+..+.+|.++|.+++| + |.++.+ ...+..+.
T Consensus 140 ~~~~~~~-~~s-l~is~D~~~l~~as~--~ik~~~~~~kevv~~ftgh~s~v~t~~f~~~~~g~~G~~vLssa~~~r~i~ 215 (541)
T KOG4547|consen 140 WKEQKPL-VSS-LCISPDGKILLTASR--QIKVLDIETKEVVITFTGHGSPVRTLSFTTLIDGIIGKYVLSSAAAERGIT 215 (541)
T ss_pred eccCCCc-cce-EEEcCCCCEEEeccc--eEEEEEccCceEEEEecCCCcceEEEEEEEeccccccceeeecccccccee
Confidence 8876443 333 799999999998865 79999954 578899999999999998 3 566555 44566788
Q ss_pred EEecCC
Q 008820 488 VQELAG 493 (552)
Q Consensus 488 iwd~~~ 493 (552)
+|-+..
T Consensus 216 ~w~v~~ 221 (541)
T KOG4547|consen 216 VWVVEK 221 (541)
T ss_pred EEEEEc
Confidence 887764
No 332
>KOG4497 consensus Uncharacterized conserved protein WDR8, contains WD repeats [General function prediction only]
Probab=99.30 E-value=1.9e-09 Score=97.20 Aligned_cols=295 Identities=13% Similarity=0.108 Sum_probs=186.9
Q ss_pred eeeecCcceEEEeeCCCeEEEEE---eecC-----ccceEEEEEc--C-CEEEEEeCCCcEEEEeCCCCeEEEEEeCCCC
Q 008820 225 ARAAGGVKDLVNGLSKGNVKFKD---LQGH-----RDCVTGLAVG--G-GFLFSSSFDKSIHVWSLKDFSHVHTFKGHDH 293 (552)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~---l~~H-----~~~V~~l~~s--~-~~l~s~s~dg~I~iwd~~~~~~~~~~~~h~~ 293 (552)
..+++.++.+++...- .+.+++ |+-| -+.|.-+.|. . -.+.....|+.|.+|++...+-...+.....
T Consensus 14 c~fSp~g~yiAs~~~y-rlviRd~~tlq~~qlf~cldki~yieW~ads~~ilC~~yk~~~vqvwsl~Qpew~ckIdeg~a 92 (447)
T KOG4497|consen 14 CSFSPCGNYIASLSRY-RLVIRDSETLQLHQLFLCLDKIVYIEWKADSCHILCVAYKDPKVQVWSLVQPEWYCKIDEGQA 92 (447)
T ss_pred eeECCCCCeeeeeeee-EEEEeccchhhHHHHHHHHHHhhheeeeccceeeeeeeeccceEEEEEeecceeEEEeccCCC
Confidence 4456666666665433 555554 2223 3567778887 3 3455567889999999998888888888889
Q ss_pred CeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeC-------------
Q 008820 294 KVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSG------------- 360 (552)
Q Consensus 294 ~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~------------- 360 (552)
++.+++|+|++..++.+...|-.|.+|.+.+.+..... +.. +.....+|+++|++.+.++.
T Consensus 93 gls~~~WSPdgrhiL~tseF~lriTVWSL~t~~~~~~~--~pK----~~~kg~~f~~dg~f~ai~sRrDCkdyv~i~~c~ 166 (447)
T KOG4497|consen 93 GLSSISWSPDGRHILLTSEFDLRITVWSLNTQKGYLLP--HPK----TNVKGYAFHPDGQFCAILSRRDCKDYVQISSCK 166 (447)
T ss_pred cceeeeECCCcceEeeeecceeEEEEEEeccceeEEec--ccc----cCceeEEECCCCceeeeeecccHHHHHHHHhhH
Confidence 99999999999999999999999999999865422111 111 11234577777776555532
Q ss_pred -----------------------CCcEEEEECCCCceeEEecCCCCCeEEEEEe--CCEEEEEeCCCcEEEEECCCCcee
Q 008820 361 -----------------------DRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC--NGVLYSGSRDGTIRLWSLSDHSLL 415 (552)
Q Consensus 361 -----------------------dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~ 415 (552)
+..+.+||---.-.+..+. ..-.+..++|+ +.+++.|+.|+.+|+.|--+-+..
T Consensus 167 ~W~ll~~f~~dT~DltgieWsPdg~~laVwd~~Leykv~aYe-~~lG~k~v~wsP~~qflavGsyD~~lrvlnh~tWk~f 245 (447)
T KOG4497|consen 167 AWILLKEFKLDTIDLTGIEWSPDGNWLAVWDNVLEYKVYAYE-RGLGLKFVEWSPCNQFLAVGSYDQMLRVLNHFTWKPF 245 (447)
T ss_pred HHHHHHhcCCCcccccCceECCCCcEEEEecchhhheeeeee-eccceeEEEeccccceEEeeccchhhhhhceeeeeeh
Confidence 1223444422111111111 23467888898 459999999999998654221111
Q ss_pred EEE------------------------------------------------------------ec----CCCCceEEEEE
Q 008820 416 TVL------------------------------------------------------------EE----DSSGAVSSVLS 431 (552)
Q Consensus 416 ~~~------------------------------------------------------------~~----~~~~~~~~~~~ 431 (552)
..+ +. ..+......++
T Consensus 246 ~eflhl~s~~dp~~~~~~ke~~~~~ql~~~cLsf~p~~~~a~~~~~se~~YE~~~~pv~~~~lkp~tD~pnPk~g~g~la 325 (447)
T KOG4497|consen 246 GEFLHLCSYHDPTLHLLEKETFSIVQLLHHCLSFTPTDLEAHIWEESETIYEQQMTPVKVHKLKPPTDFPNPKCGAGKLA 325 (447)
T ss_pred hhhccchhccCchhhhhhhhhcchhhhcccccccCCCccccCccccchhhhhhhhcceeeecccCCCCCCCcccccceee
Confidence 000 00 00111223478
Q ss_pred EcCCCCEEEEEECC--CcEEEEeCCcc-eeeeecccceEEEEEec--CCEEEEEeCCCeEEEEecCCCeeeeeeccCCCc
Q 008820 432 LTAVQHTLVVSHES--GSIKVWRNDKF-MKSMQTHKGSVFAVFLE--GKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAI 506 (552)
Q Consensus 432 ~s~~~~~l~~g~~d--g~i~iwd~~~~-~~~~~~h~~~v~~v~~~--~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~ 506 (552)
|++|..++++-.+. +.+-+||+++. +...-....+|..+.|| ...|+.+.....+++|.............
T Consensus 326 fs~Ds~y~aTrnd~~PnalW~Wdlq~l~l~avLiQk~piraf~WdP~~prL~vctg~srLY~W~psg~~~V~vP~~---- 401 (447)
T KOG4497|consen 326 FSCDSTYAATRNDKYPNALWLWDLQNLKLHAVLIQKHPIRAFEWDPGRPRLVVCTGKSRLYFWAPSGPRVVGVPKK---- 401 (447)
T ss_pred ecCCceEEeeecCCCCceEEEEechhhhhhhhhhhccceeEEEeCCCCceEEEEcCCceEEEEcCCCceEEecCCC----
Confidence 99999888886543 57889998753 33344456678888773 44666666667899999887544333222
Q ss_pred ccCcceEEEEEe-CC-eEEEEeCCCeEEE
Q 008820 507 PCGSVITALLYW-QG-KLFVGCADRTVKI 533 (552)
Q Consensus 507 ~~~~~v~~l~~~-~~-~l~s~s~Dg~v~i 533 (552)
.-.|..+.|. ++ .++..+.|....-
T Consensus 402 --GF~i~~l~W~~~g~~i~l~~kDafc~a 428 (447)
T KOG4497|consen 402 --GFNIQKLQWLQPGEFIVLCGKDAFCVA 428 (447)
T ss_pred --CceeeeEEecCCCcEEEEEcCCceEEE
Confidence 3458899998 44 4777888865433
No 333
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=99.30 E-value=1.5e-12 Score=125.01 Aligned_cols=91 Identities=15% Similarity=0.206 Sum_probs=61.4
Q ss_pred hhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhhhhhhccccCCCchhhh
Q 008820 33 SDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDYIRCVSTKASDDNIAC 111 (552)
Q Consensus 33 ~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~~~~~~~~~~~~~~~~~ 111 (552)
....||+.|||||++ ....++.++|||||||++|+|++|+ ||........
T Consensus 159 ~~~~g~~~y~aPE~~---------------~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~-------------- 209 (285)
T cd05630 159 KGRVGTVGYMAPEVV---------------KNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIK-------------- 209 (285)
T ss_pred cCCCCCccccChHHH---------------cCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccch--------------
Confidence 345899999999999 2355778999999999999999999 9975321100
Q ss_pred hhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcch
Q 008820 112 LGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLL 155 (552)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~ 155 (552)
.......... ...........++.+++.+||+.+|.+||+.
T Consensus 210 ~~~~~~~~~~---~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~ 250 (285)
T cd05630 210 REEVERLVKE---VQEEYSEKFSPDARSLCKMLLCKDPKERLGC 250 (285)
T ss_pred HHHHHhhhhh---hhhhcCccCCHHHHHHHHHHhhcCHHHccCC
Confidence 0000001011 1111122234568999999999999999983
No 334
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.30 E-value=1.8e-12 Score=124.29 Aligned_cols=116 Identities=14% Similarity=0.175 Sum_probs=74.7
Q ss_pred hhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhh-CC-Cc
Q 008820 14 AKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE-QF 89 (552)
Q Consensus 14 ~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~llt-g~-pf 89 (552)
+|+. |+++.+.............++..|||||++ . ...++.++|||||||+||||++ |. ||
T Consensus 163 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~------~---------~~~~~~~~Dv~slG~il~el~~~g~~p~ 227 (283)
T cd05090 163 VKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAI------M---------YGKFSSDSDIWSFGVVLWEIFSFGLQPY 227 (283)
T ss_pred EEeccccccccccCCcceecccCCCccceecChHHh------c---------cCCCCchhhhHHHHHHHHHHHcCCCCCC
Confidence 4444 555554333322234556678899999998 2 2456789999999999999999 88 99
Q ss_pred hHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHHh
Q 008820 90 TKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRE 164 (552)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~~ 164 (552)
.+.....+. ...... ...+........+.+++.+|++.+|.+||+..++.+.+..
T Consensus 228 ~~~~~~~~~-----------------~~~~~~---~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 228 YGFSNQEVI-----------------EMVRKR---QLLPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred CCCCHHHHH-----------------HHHHcC---CcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence 653322110 000000 0000111223458899999999999999999998876653
No 335
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=99.30 E-value=1.6e-12 Score=124.12 Aligned_cols=94 Identities=19% Similarity=0.289 Sum_probs=64.7
Q ss_pred hhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhhhhhhccccCCCchhh
Q 008820 32 LSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDYIRCVSTKASDDNIA 110 (552)
Q Consensus 32 ~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~~~~~~~~~~~~~~~~ 110 (552)
.....|++.|+|||++ . ....++++|+|||||+||+|+||+ ||.........
T Consensus 155 ~~~~~~~~~y~~PE~~------~---------~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~------------ 207 (274)
T cd06609 155 RNTFVGTPFWMAPEVI------K---------QSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRVL------------ 207 (274)
T ss_pred cccccCCccccChhhh------c---------cCCCCchhhHHHHHHHHHHHHhCCCCcccCchHHHH------------
Confidence 4567899999999999 2 244778999999999999999999 99654322110
Q ss_pred hhhhhHHHHHHHHHHHhhhhcC-ccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 111 CLGMYMAWMEKVTYLLENKFGS-EFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
...... .+...... ...++.+++.+||..+|++||++.++.+
T Consensus 208 -----~~~~~~---~~~~~~~~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~ 250 (274)
T cd06609 208 -----FLIPKN---NPPSLEGNKFSKPFKDFVSLCLNKDPKERPSAKELLK 250 (274)
T ss_pred -----HHhhhc---CCCCCcccccCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence 000000 00000011 2335889999999999999999887755
No 336
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=99.30 E-value=1.1e-08 Score=100.33 Aligned_cols=303 Identities=13% Similarity=0.116 Sum_probs=172.9
Q ss_pred eCCCeEEEEEeecCccceEEEEEc--CCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCC
Q 008820 238 LSKGNVKFKDLQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGG 315 (552)
Q Consensus 238 ~~~~~~~~~~l~~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg 315 (552)
..+....+..+....+.-..+.|+ ++++++++.||.|.++|+.+++.+.+++... ...++++++++..+++++..++
T Consensus 22 D~~t~~~~~~i~~~~~~h~~~~~s~Dgr~~yv~~rdg~vsviD~~~~~~v~~i~~G~-~~~~i~~s~DG~~~~v~n~~~~ 100 (369)
T PF02239_consen 22 DGATNKVVARIPTGGAPHAGLKFSPDGRYLYVANRDGTVSVIDLATGKVVATIKVGG-NPRGIAVSPDGKYVYVANYEPG 100 (369)
T ss_dssp ETTT-SEEEEEE-STTEEEEEE-TT-SSEEEEEETTSEEEEEETTSSSEEEEEE-SS-EEEEEEE--TTTEEEEEEEETT
T ss_pred ECCCCeEEEEEcCCCCceeEEEecCCCCEEEEEcCCCeEEEEECCcccEEEEEecCC-CcceEEEcCCCCEEEEEecCCC
Confidence 333344456666554444456777 8999999999999999999999999998654 4688999999988877888899
Q ss_pred cEEEEeCCCCCCCccccccccCC---CceeeeEEEEeeCCC-EEEEeeCCCcEEEEECCCCceeE-EecCCCCCeEEEEE
Q 008820 316 GIFVWSFSFPLGHEPLKKWNEEK---DWRYSGIHALTTSGR-YLYTGSGDRTIKAWSLLDGTLSC-TMSGHKSAVSTLAV 390 (552)
Q Consensus 316 ~i~vwd~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~-~l~sgs~dg~i~iwd~~~~~~~~-~~~~h~~~v~~l~~ 390 (552)
.+.++|.++.+..+.+....... ......+.. ++... ++++--+.+.|.+.|....+.+. +............|
T Consensus 101 ~v~v~D~~tle~v~~I~~~~~~~~~~~~Rv~aIv~-s~~~~~fVv~lkd~~~I~vVdy~d~~~~~~~~i~~g~~~~D~~~ 179 (369)
T PF02239_consen 101 TVSVIDAETLEPVKTIPTGGMPVDGPESRVAAIVA-SPGRPEFVVNLKDTGEIWVVDYSDPKNLKVTTIKVGRFPHDGGF 179 (369)
T ss_dssp EEEEEETTT--EEEEEE--EE-TTTS---EEEEEE--SSSSEEEEEETTTTEEEEEETTTSSCEEEEEEE--TTEEEEEE
T ss_pred ceeEeccccccceeecccccccccccCCCceeEEe-cCCCCEEEEEEccCCeEEEEEeccccccceeeeccccccccccc
Confidence 99999998765554443322111 112223333 44455 44555555888888977654432 23224455677888
Q ss_pred e-CC-EE-EEEeCCCcEEEEECCCCceeEEEecCC---CCceEE--------EEEEcCCCCEEEEEECCCcEEEEeCC--
Q 008820 391 C-NG-VL-YSGSRDGTIRLWSLSDHSLLTVLEEDS---SGAVSS--------VLSLTAVQHTLVVSHESGSIKVWRND-- 454 (552)
Q Consensus 391 ~-~~-~l-~s~~~dg~i~iwd~~~~~~~~~~~~~~---~~~~~~--------~~~~s~~~~~l~~g~~dg~i~iwd~~-- 454 (552)
+ ++ ++ ++...++.|-++|..+++.+..+.... ...... +......+...++.-....+.+||..
T Consensus 180 dpdgry~~va~~~sn~i~viD~~~~k~v~~i~~g~~p~~~~~~~~php~~g~vw~~~~~~~~~~~~ig~~~v~v~d~~~w 259 (369)
T PF02239_consen 180 DPDGRYFLVAANGSNKIAVIDTKTGKLVALIDTGKKPHPGPGANFPHPGFGPVWATSGLGYFAIPLIGTDPVSVHDDYAW 259 (369)
T ss_dssp -TTSSEEEEEEGGGTEEEEEETTTTEEEEEEE-SSSBEETTEEEEEETTTEEEEEEEBSSSSEEEEEE--TTT-STTTBT
T ss_pred CcccceeeecccccceeEEEeeccceEEEEeeccccccccccccccCCCcceEEeeccccceecccccCCccccchhhcC
Confidence 8 33 44 445677899999999988776664321 111111 01122222232222223345566643
Q ss_pred cceeeeecccceEE-EEEecCCEEEEE----eCCCeEEEEecCCCeeeeeeccCCCcccCcceEEEEEeC-Ce--EEEEe
Q 008820 455 KFMKSMQTHKGSVF-AVFLEGKWLFTG----GWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQ-GK--LFVGC 526 (552)
Q Consensus 455 ~~~~~~~~h~~~v~-~v~~~~~~l~sg----s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~~-~~--l~s~s 526 (552)
+.++.+....+.+. ..++++++++.. ...++|.++|.++.+....+.... ...+..+.|++ +. .+|.-
T Consensus 260 kvv~~I~~~G~glFi~thP~s~~vwvd~~~~~~~~~v~viD~~tl~~~~~i~~~~----~~~~~h~ef~~dG~~v~vS~~ 335 (369)
T PF02239_consen 260 KVVKTIPTQGGGLFIKTHPDSRYVWVDTFLNPDADTVQVIDKKTLKVVKTITPGP----GKRVVHMEFNPDGKEVWVSVW 335 (369)
T ss_dssp SEEEEEE-SSSS--EE--TT-SEEEEE-TT-SSHT-EEEEECCGTEEEE-HHHHH----T--EEEEEE-TTSSEEEEEEE
T ss_pred eEEEEEECCCCcceeecCCCCccEEeeccCCCCCceEEEEECcCcceeEEEeccC----CCcEeccEECCCCCEEEEEEe
Confidence 46666766555543 345799999988 445899999999876554443211 23488899994 33 33433
Q ss_pred -CCCeEEEEEecCCcceeEEEe
Q 008820 527 -ADRTVKIALCNRQIPEIFSLL 547 (552)
Q Consensus 527 -~Dg~v~iw~~~~~~~~~~~~~ 547 (552)
.+|.|.+||.. +.+++.++.
T Consensus 336 ~~~~~i~v~D~~-Tl~~~~~i~ 356 (369)
T PF02239_consen 336 DGNGAIVVYDAK-TLKEKKRIP 356 (369)
T ss_dssp --TTEEEEEETT-TTEEEEEEE
T ss_pred cCCCEEEEEECC-CcEEEEEEE
Confidence 34489999987 565555543
No 337
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=99.30 E-value=1.3e-12 Score=128.94 Aligned_cols=116 Identities=17% Similarity=0.268 Sum_probs=67.2
Q ss_pred hhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhhhh----hhccccCCC
Q 008820 32 LSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDYI----RCVSTKASD 106 (552)
Q Consensus 32 ~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~~~----~~~~~~~~~ 106 (552)
....+||+.|||||++. + ....+++++|||||||++|||+||+ ||.+...... ....+...+
T Consensus 163 ~~~~~~t~~y~aPE~~~------~-------~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~ 229 (338)
T cd07859 163 WTDYVATRWYRAPELCG------S-------FFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSP 229 (338)
T ss_pred ccCCCCCCCcCCHHHHh------c-------cccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCH
Confidence 45678999999999982 1 1245678999999999999999999 9965432211 100111000
Q ss_pred chhhhhhh--hHHHHHHH----HHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 107 DNIACLGM--YMAWMEKV----TYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 107 ~~~~~~~~--~~~~~~~~----~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
..+..... ........ +...........+.+.+++.+||+.+|.+||++.++.+
T Consensus 230 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~ 289 (338)
T cd07859 230 ETISRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALA 289 (338)
T ss_pred HHHHHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhc
Confidence 00000000 00000000 00001111123445789999999999999999887665
No 338
>KOG1354 consensus Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]
Probab=99.30 E-value=3.8e-10 Score=102.27 Aligned_cols=239 Identities=15% Similarity=0.295 Sum_probs=152.8
Q ss_pred ccceEEEEEc--CCEEEEEeCCCcEEEEeCCCCe-----EEEEEeCCC------------CCeEEEEEecCCC-CEEEEE
Q 008820 252 RDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFS-----HVHTFKGHD------------HKVMAVVYVDEDQ-PLCISG 311 (552)
Q Consensus 252 ~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~~-----~~~~~~~h~------------~~v~~v~~~~~~~-~~l~s~ 311 (552)
.+-|.++.|. |.+|+||..+|.|.++.-.... ....++.|. ..|..+.|.++++ ..++..
T Consensus 25 adiis~vef~~~Ge~LatGdkgGRVv~f~r~~~~~~ey~~~t~fqshepEFDYLkSleieEKinkIrw~~~~n~a~FLls 104 (433)
T KOG1354|consen 25 ADIISAVEFDHYGERLATGDKGGRVVLFEREKLYKGEYNFQTEFQSHEPEFDYLKSLEIEEKINKIRWLDDGNLAEFLLS 104 (433)
T ss_pred hcceeeEEeecccceEeecCCCCeEEEeecccccccceeeeeeeeccCcccchhhhhhhhhhhhhceecCCCCccEEEEe
Confidence 4678999998 9999999999999999643221 233444453 4688899987654 466778
Q ss_pred cCCCcEEEEeCCCCCCCc---------------cc-----------------cccccCCCceeeeEEEEeeCCCEEEEee
Q 008820 312 DSGGGIFVWSFSFPLGHE---------------PL-----------------KKWNEEKDWRYSGIHALTTSGRYLYTGS 359 (552)
Q Consensus 312 ~~dg~i~vwd~~~~~~~~---------------~~-----------------~~~~~~~~~~~~~~~~~~~~~~~l~sgs 359 (552)
+.|.+|++|.+....... .+ +.+...+..+.. ..+++.|...++++
T Consensus 105 tNdktiKlWKi~er~~k~~~~~~~~~~~~~~~~~lr~p~~~~~~~~vea~prRv~aNaHtyhiN-SIS~NsD~Et~lSA- 182 (433)
T KOG1354|consen 105 TNDKTIKLWKIRERGSKKEGYNLPEEGPPGTITSLRLPVEGRHDLEVEASPRRVYANAHTYHIN-SISVNSDKETFLSA- 182 (433)
T ss_pred cCCcceeeeeeeccccccccccccccCCCCccceeeceeeccccceeeeeeeeeccccceeEee-eeeecCccceEeec-
Confidence 899999999886432221 00 001111111111 11344455566665
Q ss_pred CCCcEEEEECCCCc-e--eEEecCC-----CCCeEEEEEe---CCEEEEEeCCCcEEEEECCCCce----eEEEecCCC-
Q 008820 360 GDRTIKAWSLLDGT-L--SCTMSGH-----KSAVSTLAVC---NGVLYSGSRDGTIRLWSLSDHSL----LTVLEEDSS- 423 (552)
Q Consensus 360 ~dg~i~iwd~~~~~-~--~~~~~~h-----~~~v~~l~~~---~~~l~s~~~dg~i~iwd~~~~~~----~~~~~~~~~- 423 (552)
.|=.|.+|+++--. . +..++.+ ..-|++..|+ .+.++-.+..|+|++-|+|.... ...+.....
T Consensus 183 DdLRINLWnlei~d~sFnIVDIKP~nmEeLteVITsaEFhp~~cn~f~YSSSKGtIrLcDmR~~aLCd~hsKlfEepedp 262 (433)
T KOG1354|consen 183 DDLRINLWNLEIIDQSFNIVDIKPANMEELTEVITSAEFHPHHCNVFVYSSSKGTIRLCDMRQSALCDAHSKLFEEPEDP 262 (433)
T ss_pred cceeeeeccccccCCceeEEEccccCHHHHHHHHhhhccCHhHccEEEEecCCCcEEEeechhhhhhcchhhhhccccCC
Confidence 56889999986322 1 2223333 2457888888 45888899999999999985321 111111110
Q ss_pred ----------CceEEEEEEcCCCCEEEEEECCCcEEEEeCC---cceeeeecccc------------eE---EEEEe--c
Q 008820 424 ----------GAVSSVLSLTAVQHTLVVSHESGSIKVWRND---KFMKSMQTHKG------------SV---FAVFL--E 473 (552)
Q Consensus 424 ----------~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~---~~~~~~~~h~~------------~v---~~v~~--~ 473 (552)
..+.. +.|+++|+++++-+. -+|++||+. +++.++..|.. .| ..++| +
T Consensus 263 ~~rsffseiIsSISD-vKFs~sGryilsRDy-ltvk~wD~nme~~pv~t~~vh~~lr~kLc~lYEnD~IfdKFec~~sg~ 340 (433)
T KOG1354|consen 263 SSRSFFSEIISSISD-VKFSHSGRYILSRDY-LTVKLWDLNMEAKPVETYPVHEYLRSKLCSLYENDAIFDKFECSWSGN 340 (433)
T ss_pred cchhhHHHHhhhhhc-eEEccCCcEEEEecc-ceeEEEeccccCCcceEEeehHhHHHHHHHHhhccchhheeEEEEcCC
Confidence 11222 589999999998654 489999963 46666666642 22 23456 5
Q ss_pred CCEEEEEeCCCeEEEEecCCC
Q 008820 474 GKWLFTGGWDKTVSVQELAGD 494 (552)
Q Consensus 474 ~~~l~sgs~dg~i~iwd~~~~ 494 (552)
+.+++|||..+..++++...+
T Consensus 341 ~~~v~TGsy~n~frvf~~~~g 361 (433)
T KOG1354|consen 341 DSYVMTGSYNNVFRVFNLARG 361 (433)
T ss_pred cceEecccccceEEEecCCCC
Confidence 559999999999999996544
No 339
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=99.29 E-value=2.1e-12 Score=122.70 Aligned_cols=100 Identities=20% Similarity=0.396 Sum_probs=69.2
Q ss_pred hhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhhhhhhccccCCCchhh
Q 008820 32 LSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDYIRCVSTKASDDNIA 110 (552)
Q Consensus 32 ~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~~~~~~~~~~~~~~~~ 110 (552)
.....|++.|||||++ . ....+.++|+||||+++|+|++|. ||........
T Consensus 163 ~~~~~~~~~~~ape~~------~---------~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~------------- 214 (267)
T cd08229 163 AHSLVGTPYYMSPERI------H---------ENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLY------------- 214 (267)
T ss_pred cccccCCcCccCHHHh------c---------CCCccchhhHHHHHHHHHHHHhCCCCcccccchHH-------------
Confidence 3456899999999998 2 245668999999999999999999 9965332100
Q ss_pred hhhhhHHHHHHHHHH--HhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHHhh
Q 008820 111 CLGMYMAWMEKVTYL--LENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIREL 165 (552)
Q Consensus 111 ~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~~~ 165 (552)
......... +..........+.+++.+|+..+|.+||++.++.+.+.++
T Consensus 215 ------~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~ 265 (267)
T cd08229 215 ------SLCKKIEQCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRM 265 (267)
T ss_pred ------HHhhhhhcCCCCCCCcccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhh
Confidence 000000000 0001112334599999999999999999999998887764
No 340
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=99.29 E-value=1.3e-12 Score=125.58 Aligned_cols=115 Identities=15% Similarity=0.158 Sum_probs=67.8
Q ss_pred hhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhhhh----hhccccCCC
Q 008820 32 LSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDYI----RCVSTKASD 106 (552)
Q Consensus 32 ~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~~~----~~~~~~~~~ 106 (552)
.....||+.|||||++ .| ...++.++|||||||++|||+||+ ||.+.+.... ........+
T Consensus 160 ~~~~~~~~~y~aPE~~------~~--------~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 225 (288)
T cd07871 160 YSNEVVTLWYRPPDVL------LG--------STEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTE 225 (288)
T ss_pred ccCceecccccChHHh------cC--------CcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCh
Confidence 4567899999999998 22 234568999999999999999999 9965443211 101111111
Q ss_pred chhhhhhhhHHHHHHH-HH----HHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 107 DNIACLGMYMAWMEKV-TY----LLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 107 ~~~~~~~~~~~~~~~~-~~----~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
..|........+.... +. ...........++.+++.+||+.+|.+||++.++.+
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~ 284 (288)
T cd07871 226 ETWPGITSNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALR 284 (288)
T ss_pred HHhhccccchhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 1121000000000000 00 000111223446889999999999999999887654
No 341
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=99.29 E-value=7.1e-13 Score=131.90 Aligned_cols=119 Identities=16% Similarity=0.139 Sum_probs=72.6
Q ss_pred hhhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cc
Q 008820 13 VAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QF 89 (552)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf 89 (552)
.+|+. |+++.+..... .......||+.|||||++... .....++.++|||||||+||||++|+ ||
T Consensus 180 ~~kL~DfG~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~-----------~~~~~~~~~~DiwSlGvilyelltG~~Pf 247 (370)
T cd05596 180 HLKLADFGTCMKMDANGM-VRCDTAVGTPDYISPEVLKSQ-----------GGDGYYGRECDWWSVGVFLYEMLVGDTPF 247 (370)
T ss_pred CEEEEeccceeeccCCCc-ccCCCCCCCcCeECHHHhccC-----------CCCCCCCCceeeeehhHHHHHHHhCCCCc
Confidence 35555 55555543321 113457899999999998211 01234678999999999999999999 99
Q ss_pred hHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCC--CcchhhHHH
Q 008820 90 TKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGC--RPLLTNVWK 160 (552)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~--R~~~~~~~~ 160 (552)
.......+. ..+.........+.......++.+++.+||+.+|.+ |+++.++..
T Consensus 248 ~~~~~~~~~-----------------~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~ 303 (370)
T cd05596 248 YADSLVGTY-----------------SKIMDHKNSLTFPDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKS 303 (370)
T ss_pred CCCCHHHHH-----------------HHHHcCCCcCCCCCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhc
Confidence 765433110 011000000000111123446889999999998987 888777654
No 342
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.29 E-value=2.1e-12 Score=128.26 Aligned_cols=60 Identities=23% Similarity=0.527 Sum_probs=45.2
Q ss_pred hhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cch
Q 008820 14 AKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFT 90 (552)
Q Consensus 14 ~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~ 90 (552)
.|++ |+++...... ..+...||+.|||||++ .| ..++.++|||||||+||+|+||+ ||.
T Consensus 162 ~kl~Dfg~a~~~~~~~---~~~~~~~t~~y~aPE~~------~~---------~~~~~~~DiwSlG~il~el~tg~~pf~ 223 (359)
T cd07876 162 LKILDFGLARTACTNF---MMTPYVVTRYYRAPEVI------LG---------MGYKENVDIWSVGCIMGELVKGSVIFQ 223 (359)
T ss_pred EEEecCCCccccccCc---cCCCCcccCCCCCchhc------cC---------CCCCcchhhHHHHHHHHHHHhCCCCCC
Confidence 4555 4454443322 24567899999999998 32 45678999999999999999999 995
Q ss_pred H
Q 008820 91 K 91 (552)
Q Consensus 91 ~ 91 (552)
.
T Consensus 224 ~ 224 (359)
T cd07876 224 G 224 (359)
T ss_pred C
Confidence 4
No 343
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=99.29 E-value=1.2e-12 Score=126.95 Aligned_cols=122 Identities=12% Similarity=0.107 Sum_probs=73.8
Q ss_pred hhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhh--CC-C
Q 008820 14 AKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI--GE-Q 88 (552)
Q Consensus 14 ~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~llt--g~-p 88 (552)
.|+. |+++.+...+.....+...+|+.|||||++ ..+.+++++|||||||++|||++ +. |
T Consensus 177 ~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~---------------~~~~~~~~~Dv~slG~~l~el~~~~~~~p 241 (304)
T cd05096 177 IKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECI---------------LMGKFTTASDVWAFGVTLWEILMLCKEQP 241 (304)
T ss_pred EEECCCccceecccCceeEecCcCCCCccccCHHHH---------------hcCCCCchhhhHHHHHHHHHHHHccCCCC
Confidence 4454 556555443322234556678999999998 23557789999999999999987 55 7
Q ss_pred chHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHH
Q 008820 89 FTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIR 163 (552)
Q Consensus 89 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~ 163 (552)
|.......+. . ........................+.+++.+|++.+|.+||++.++.+.+.
T Consensus 242 ~~~~~~~~~~--~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~ 303 (304)
T cd05096 242 YGELTDEQVI--E-----------NAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLT 303 (304)
T ss_pred CCcCCHHHHH--H-----------HHHHHhhhccccccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHh
Confidence 7543222110 0 000000000000000111123345899999999999999999999877654
No 344
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=99.29 E-value=1e-12 Score=130.27 Aligned_cols=94 Identities=19% Similarity=0.271 Sum_probs=64.0
Q ss_pred hhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhhhhhhccccCCCchhh
Q 008820 32 LSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDYIRCVSTKASDDNIA 110 (552)
Q Consensus 32 ~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~~~~~~~~~~~~~~~~ 110 (552)
.....||+.|||||++ .+ ..++.++|||||||+||||++|+ ||.........
T Consensus 187 ~~~~~gt~~y~aPE~~------~~---------~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~~------------ 239 (350)
T cd05573 187 ANSTVGTPDYIAPEVL------RG---------TPYGLECDWWSLGVILYEMLYGFPPFYSDTLQETY------------ 239 (350)
T ss_pred ccccccCccccCHHHH------cC---------CCCCCceeeEecchhhhhhccCCCCCCCCCHHHHH------------
Confidence 4567899999999999 33 46778999999999999999999 99664432110
Q ss_pred hhhhhHHHHH--HHHHHHhhhhcCccccHHHHHHhhcccCCCCCcc-hhhHHH
Q 008820 111 CLGMYMAWME--KVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPL-LTNVWK 160 (552)
Q Consensus 111 ~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~-~~~~~~ 160 (552)
..+.. .....+ .......++.+++.+||. +|.+||+ +.++.+
T Consensus 240 -----~~i~~~~~~~~~p--~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~ 284 (350)
T cd05573 240 -----NKIINWKESLRFP--PDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKS 284 (350)
T ss_pred -----HHHhccCCcccCC--CCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhc
Confidence 00000 000001 111134568899999997 9999999 666554
No 345
>PHA02882 putative serine/threonine kinase; Provisional
Probab=99.29 E-value=3.2e-12 Score=123.20 Aligned_cols=100 Identities=6% Similarity=-0.072 Sum_probs=67.0
Q ss_pred hccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhh-hhhhccccCCCchhhh
Q 008820 34 DFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELID-YIRCVSTKASDDNIAC 111 (552)
Q Consensus 34 ~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~-~~~~~~~~~~~~~~~~ 111 (552)
...||+.|||||++ . ...++.++|||||||+||||++|+ ||...... .+. .
T Consensus 192 ~~~gt~~y~ape~~------~---------~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~--~---------- 244 (294)
T PHA02882 192 LHRGTLYYAGLDAH------N---------GACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLI--H---------- 244 (294)
T ss_pred ccCCCccccCHHHh------C---------CCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHH--H----------
Confidence 45799999999998 3 355679999999999999999999 99664211 110 0
Q ss_pred hhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHH
Q 008820 112 LGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCI 162 (552)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l 162 (552)
............ ...........+.+++..|+..+|++||+..++.+.+
T Consensus 245 -~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~ 293 (294)
T PHA02882 245 -AAKCDFIKRLHE-GKIKIKNANKFIYDFIECVTKLSYEEKPDYDALIKIF 293 (294)
T ss_pred -HhHHHHHHHhhh-hhhccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhh
Confidence 000011111110 0111122344588999999999999999999887754
No 346
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=99.29 E-value=2.1e-12 Score=123.18 Aligned_cols=117 Identities=15% Similarity=0.106 Sum_probs=74.3
Q ss_pred hhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhh-CC-Cc
Q 008820 14 AKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE-QF 89 (552)
Q Consensus 14 ~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~llt-g~-pf 89 (552)
+|+. |+++.+.............+++.|||||++ . ...+++++|||||||++|||++ |. ||
T Consensus 152 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~------~---------~~~~~~~~Dv~SlG~il~el~~~g~~p~ 216 (273)
T cd05035 152 VCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESL------A---------DRVYTSKSDVWAFGVTMWEIATRGQTPY 216 (273)
T ss_pred EEECCccceeeccccccccccccccCCccccCHhhc------c---------cCCCCcccchHHHHHHHHHHHhCCCCCC
Confidence 3444 455554433221112223457899999998 2 2456789999999999999999 88 98
Q ss_pred hHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHHhh
Q 008820 90 TKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIREL 165 (552)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~~~ 165 (552)
.......+. ..... ............++.+++.+||+.+|.+||++.++.+.+..+
T Consensus 217 ~~~~~~~~~-----------------~~~~~---~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 217 PGVENHEIY-----------------DYLRH---GNRLKQPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred CCCCHHHHH-----------------HHHHc---CCCCCCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 653322110 00000 000011112344589999999999999999999999887764
No 347
>KOG4190 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.28 E-value=2.7e-11 Score=116.01 Aligned_cols=284 Identities=16% Similarity=0.243 Sum_probs=179.8
Q ss_pred eEEEEEeecCccceEEEEEc--CCEEEEEeCCCcEEEEeCC-------CCeEEEEEeCCCCCeEEEEEecCCCCEEEEEc
Q 008820 242 NVKFKDLQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLK-------DFSHVHTFKGHDHKVMAVVYVDEDQPLCISGD 312 (552)
Q Consensus 242 ~~~~~~l~~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~-------~~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~ 312 (552)
.+++..+.||+..|+.++-- .+-+++++.|.+|++|.++ +..+..+++.|..+|.++.|..+.. ..++
T Consensus 725 ~irL~nf~GH~~~iRai~AidNENSFiSASkDKTVKLWSik~EgD~~~tsaCQfTY~aHkk~i~~igfL~~lr---~i~S 801 (1034)
T KOG4190|consen 725 HIRLCNFTGHQEKIRAIAAIDNENSFISASKDKTVKLWSIKPEGDEIGTSACQFTYQAHKKPIHDIGFLADLR---SIAS 801 (1034)
T ss_pred eeeeecccCcHHHhHHHHhcccccceeeccCCceEEEEEeccccCccccceeeeEhhhccCcccceeeeeccc---eeee
Confidence 45567789999999998654 8889999999999999885 3357788899999999999987544 3456
Q ss_pred CCCcEEEEeCCCCCCCccccccccCCCceeeeEEEEee-CCCEE-EEeeCCCcEEEEECCCCceeEEec-----CCCCCe
Q 008820 313 SGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTT-SGRYL-YTGSGDRTIKAWSLLDGTLSCTMS-----GHKSAV 385 (552)
Q Consensus 313 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l-~sgs~dg~i~iwd~~~~~~~~~~~-----~h~~~v 385 (552)
.||.|.+||.-.+........ ..+......+.++.. +...+ +.++...+|+++|.+.++-...++ +....+
T Consensus 802 cD~giHlWDPFigr~Laq~~d--apk~~a~~~ikcl~nv~~~iliAgcsaeSTVKl~DaRsce~~~E~kVcna~~Pna~~ 879 (1034)
T KOG4190|consen 802 CDGGIHLWDPFIGRLLAQMED--APKEGAGGNIKCLENVDRHILIAGCSAESTVKLFDARSCEWTCELKVCNAPGPNALT 879 (1034)
T ss_pred ccCcceeecccccchhHhhhc--CcccCCCceeEecccCcchheeeeccchhhheeeecccccceeeEEeccCCCCchhe
Confidence 689999999654432221111 111112333445443 33434 444788999999999887665553 344567
Q ss_pred EEEEEe--CCEEEEEeCCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEECCCcEEE-EeCCcceeeee-
Q 008820 386 STLAVC--NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKV-WRNDKFMKSMQ- 461 (552)
Q Consensus 386 ~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~i-wd~~~~~~~~~- 461 (552)
.++++. ++.++.+-.+|+|.+.|.++|+.+..++.-...... --.|....++....|.++.+ |..-..+..++
T Consensus 880 R~iaVa~~GN~lAa~LSnGci~~LDaR~G~vINswrpmecdllq---laapsdq~L~~saldHslaVnWhaldgimh~q~ 956 (1034)
T KOG4190|consen 880 RAIAVADKGNKLAAALSNGCIAILDARNGKVINSWRPMECDLLQ---LAAPSDQALAQSALDHSLAVNWHALDGIMHLQD 956 (1034)
T ss_pred eEEEeccCcchhhHHhcCCcEEEEecCCCceeccCCcccchhhh---hcCchhHHHHhhcccceeEeeehhcCCeeeecc
Confidence 888887 669999999999999999999988777543221111 12355566777777888888 86322222221
Q ss_pred -cccceEEEEEecCCEEEEEeCCCeEEEEecCCC-eeeeeeccCCCcccCcceEEEEEeC-Ce-EEEEeCCCeEEE
Q 008820 462 -THKGSVFAVFLEGKWLFTGGWDKTVSVQELAGD-EFEEDVIPTGAIPCGSVITALLYWQ-GK-LFVGCADRTVKI 533 (552)
Q Consensus 462 -~h~~~v~~v~~~~~~l~sgs~dg~i~iwd~~~~-~~~~~~~~~~~~~~~~~v~~l~~~~-~~-l~s~s~Dg~v~i 533 (552)
....+..-+..-|.-|+++.....+.+|--... ....+......-...+..++++.-| +. ++.|...|.|.+
T Consensus 957 kpppepahflqsvgpSLV~a~~Gn~lgVYad~a~~ha~stitKiR~d~f~G~lTala~LPLN~afLaGne~G~IaL 1032 (1034)
T KOG4190|consen 957 KPPPEPAHFLQSVGPSLVTAQNGNILGVYADSAELHAESTITKIRPDEFPGTLTALAPLPLNCAFLAGNEHGAIAL 1032 (1034)
T ss_pred CCCCcchhhhhccCceeEEeccCcEEEEEecchhhhhhhhhccccccccCCccceeeeccccchhhccCCCCceee
Confidence 111111112224666777777777888743211 1111111111111245566666664 33 778888888875
No 348
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=99.28 E-value=2.5e-12 Score=122.28 Aligned_cols=100 Identities=18% Similarity=0.374 Sum_probs=68.3
Q ss_pred hhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhhhhhhccccCCCchhh
Q 008820 32 LSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDYIRCVSTKASDDNIA 110 (552)
Q Consensus 32 ~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~~~~~~~~~~~~~~~~ 110 (552)
.....|++.|||||++ . ....+.++|+|||||++|||++|+ ||.......
T Consensus 163 ~~~~~~~~~~~aPE~~------~---------~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~-------------- 213 (267)
T cd08228 163 AHSLVGTPYYMSPERI------H---------ENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNL-------------- 213 (267)
T ss_pred HhcCCCCccccChhhh------c---------cCCCCchhhHHHHHHHHHHHhcCCCCCccccccH--------------
Confidence 3457899999999998 2 245668999999999999999999 985432210
Q ss_pred hhhhhHHHHHHHHH--HHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHHhh
Q 008820 111 CLGMYMAWMEKVTY--LLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIREL 165 (552)
Q Consensus 111 ~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~~~ 165 (552)
..+...+.. .+..........+.+++.+|+..+|++||+..++.+.+.++
T Consensus 214 -----~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~ 265 (267)
T cd08228 214 -----FSLCQKIEQCDYPPLPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQM 265 (267)
T ss_pred -----HHHHHHHhcCCCCCCChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHh
Confidence 000000000 00000011223488999999999999999999999887764
No 349
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=99.28 E-value=1.8e-12 Score=125.24 Aligned_cols=117 Identities=10% Similarity=0.064 Sum_probs=71.1
Q ss_pred cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhh--CC-CchHHHh
Q 008820 18 CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI--GE-QFTKELI 94 (552)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~llt--g~-pf~~~~~ 94 (552)
|+++.+...+.........+|+.|||||++. ...++.++|||||||++|||++ |. ||.....
T Consensus 175 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~---------------~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~ 239 (296)
T cd05051 175 GMSRNLYSSDYYRVQGRAPLPIRWMAWESVL---------------LGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTD 239 (296)
T ss_pred cceeecccCcceeecCcCCCCceecCHHHhh---------------cCCCCccchhhhhHHHHHHHHhcCCCCCCCCcCh
Confidence 4455444333222344567789999999982 2456789999999999999998 66 8854322
Q ss_pred hhhhhccccCCCchhhhhhhhHHH-HHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHH
Q 008820 95 DYIRCVSTKASDDNIACLGMYMAW-MEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIR 163 (552)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~ 163 (552)
..+. ...... ...............+.++.+++.+||+.+|.+||++.++.+.+.
T Consensus 240 ~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~ 295 (296)
T cd05051 240 QQVI--------------ENAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQ 295 (296)
T ss_pred HHHH--------------HHHHhccccccccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhc
Confidence 2110 000000 000000000111122346999999999999999999999877653
No 350
>PRK11138 outer membrane biogenesis protein BamB; Provisional
Probab=99.28 E-value=6e-09 Score=104.66 Aligned_cols=273 Identities=12% Similarity=0.050 Sum_probs=174.6
Q ss_pred EEcCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCC----------Ce-EEEEEecCCCCEEEEEcCCCcEEEEeCCCCCC
Q 008820 259 AVGGGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDH----------KV-MAVVYVDEDQPLCISGDSGGGIFVWSFSFPLG 327 (552)
Q Consensus 259 ~~s~~~l~s~s~dg~I~iwd~~~~~~~~~~~~h~~----------~v-~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~ 327 (552)
.+.++.++.++.+|.+..+|.++|+.+........ .+ ..+.. .++ .++.++.+|.+..+|.++++.
T Consensus 66 vv~~~~vy~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~v--~~~-~v~v~~~~g~l~ald~~tG~~ 142 (394)
T PRK11138 66 AVAYNKVYAADRAGLVKALDADTGKEIWSVDLSEKDGWFSKNKSALLSGGVTV--AGG-KVYIGSEKGQVYALNAEDGEV 142 (394)
T ss_pred EEECCEEEEECCCCeEEEEECCCCcEeeEEcCCCcccccccccccccccccEE--ECC-EEEEEcCCCEEEEEECCCCCC
Confidence 34578888888899999999999999887653221 00 01111 123 456778899999999998876
Q ss_pred CccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCe-----EEEEEeCCEEEEEeCCC
Q 008820 328 HEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAV-----STLAVCNGVLYSGSRDG 402 (552)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v-----~~l~~~~~~l~s~~~dg 402 (552)
.......... .. +....+..++.++.+|.+..+|.++|+.++.+....... .+-...++.++.++.+|
T Consensus 143 ~W~~~~~~~~---~s----sP~v~~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~sP~v~~~~v~~~~~~g 215 (394)
T PRK11138 143 AWQTKVAGEA---LS----RPVVSDGLVLVHTSNGMLQALNESDGAVKWTVNLDVPSLTLRGESAPATAFGGAIVGGDNG 215 (394)
T ss_pred cccccCCCce---ec----CCEEECCEEEEECCCCEEEEEEccCCCEeeeecCCCCcccccCCCCCEEECCEEEEEcCCC
Confidence 6554432110 01 111134567778889999999999999998876432111 12223366788888999
Q ss_pred cEEEEECCCCceeEEEecCCCCceEE-----EEEEcC--CCCEEEEEECCCcEEEEeCCcceeeeecccceEEEEEecCC
Q 008820 403 TIRLWSLSDHSLLTVLEEDSSGAVSS-----VLSLTA--VQHTLVVSHESGSIKVWRNDKFMKSMQTHKGSVFAVFLEGK 475 (552)
Q Consensus 403 ~i~iwd~~~~~~~~~~~~~~~~~~~~-----~~~~s~--~~~~l~~g~~dg~i~iwd~~~~~~~~~~h~~~v~~v~~~~~ 475 (552)
.+..+|..+|+.+............. ....+| .+..+++++.+|.+..+|..+....++........+...+.
T Consensus 216 ~v~a~d~~~G~~~W~~~~~~~~~~~~~~~~~~~~~sP~v~~~~vy~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~ 295 (394)
T PRK11138 216 RVSAVLMEQGQLIWQQRISQPTGATEIDRLVDVDTTPVVVGGVVYALAYNGNLVALDLRSGQIVWKREYGSVNDFAVDGG 295 (394)
T ss_pred EEEEEEccCChhhheeccccCCCccchhcccccCCCcEEECCEEEEEEcCCeEEEEECCCCCEEEeecCCCccCcEEECC
Confidence 99999999998877654321100000 000111 24567777889999999965443333322222223345778
Q ss_pred EEEEEeCCCeEEEEecCCCeeeeeeccCCCcccCcceEEEEEeCCeEEEEeCCCeEEEEEecCCcceeEEE
Q 008820 476 WLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQGKLFVGCADRTVKIALCNRQIPEIFSL 546 (552)
Q Consensus 476 ~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~l~s~s~Dg~v~iw~~~~~~~~~~~~ 546 (552)
.++.++.+|.+..+|..+++......... .....+....++.++.++.||.|++.|.. +++.+.+.
T Consensus 296 ~vy~~~~~g~l~ald~~tG~~~W~~~~~~----~~~~~sp~v~~g~l~v~~~~G~l~~ld~~-tG~~~~~~ 361 (394)
T PRK11138 296 RIYLVDQNDRVYALDTRGGVELWSQSDLL----HRLLTAPVLYNGYLVVGDSEGYLHWINRE-DGRFVAQQ 361 (394)
T ss_pred EEEEEcCCCeEEEEECCCCcEEEcccccC----CCcccCCEEECCEEEEEeCCCEEEEEECC-CCCEEEEE
Confidence 88889999999999999887665432211 11123334458899999999999999886 45555544
No 351
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=99.28 E-value=1.7e-12 Score=122.53 Aligned_cols=94 Identities=18% Similarity=0.324 Sum_probs=64.9
Q ss_pred hhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhhhhhhccccCCCchhh
Q 008820 32 LSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDYIRCVSTKASDDNIA 110 (552)
Q Consensus 32 ~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~~~~~~~~~~~~~~~~ 110 (552)
.....|++.|||||++ . ....+.++|+||||+++|+|++|+ ||.......+.
T Consensus 157 ~~~~~~~~~~~aPE~~------~---------~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~------------ 209 (255)
T cd08219 157 ACTYVGTPYYVPPEIW------E---------NMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNLI------------ 209 (255)
T ss_pred cccccCCccccCHHHH------c---------cCCcCchhhhhhhchhheehhhccCCCCCCCHHHHH------------
Confidence 4567899999999998 2 245678999999999999999999 99764433110
Q ss_pred hhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 111 CLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
....... ...........+.+++.+||+.+|.+||++.++..
T Consensus 210 -----~~~~~~~---~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 251 (255)
T cd08219 210 -----LKVCQGS---YKPLPSHYSYELRSLIKQMFKRNPRSRPSATTILS 251 (255)
T ss_pred -----HHHhcCC---CCCCCcccCHHHHHHHHHHHhCCcccCCCHHHHhh
Confidence 0000000 00001112334889999999999999999887654
No 352
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=99.28 E-value=1.7e-12 Score=123.84 Aligned_cols=116 Identities=15% Similarity=0.151 Sum_probs=71.1
Q ss_pred hhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cch
Q 008820 14 AKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFT 90 (552)
Q Consensus 14 ~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~ 90 (552)
.|+. |+++.+..... ......||+.|+|||++.... .....++.++|+|||||++|||++|+ ||.
T Consensus 150 ~~l~Dfg~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~----------~~~~~~~~~~Dv~slGv~l~el~~g~~p~~ 217 (272)
T cd06637 150 VKLVDFGVSAQLDRTVG--RRNTFIGTPYWMAPEVIACDE----------NPDATYDFKSDLWSLGITAIEMAEGAPPLC 217 (272)
T ss_pred EEEccCCCceecccccc--cCCcccccccccCHhHhcccc----------CcCCCCCchhhHHHHHHHHHHHHhCCCCcc
Confidence 4455 45554433222 245678999999999982110 01234668999999999999999999 996
Q ss_pred HHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 91 KELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
........ ...... . ............+.+++.+||..+|.+||++.++.+
T Consensus 218 ~~~~~~~~----------------~~~~~~--~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 268 (272)
T cd06637 218 DMHPMRAL----------------FLIPRN--P-APRLKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMK 268 (272)
T ss_pred ccCHHHHH----------------HHHhcC--C-CCCCCCCCcCHHHHHHHHHHcCCChhhCCCHHHHhh
Confidence 43211000 000000 0 000001112335889999999999999999887654
No 353
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=99.28 E-value=2.3e-12 Score=122.00 Aligned_cols=95 Identities=18% Similarity=0.143 Sum_probs=65.1
Q ss_pred hccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhh-CC-CchHHHhhhhhhccccCCCchhhh
Q 008820 34 DFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE-QFTKELIDYIRCVSTKASDDNIAC 111 (552)
Q Consensus 34 ~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~llt-g~-pf~~~~~~~~~~~~~~~~~~~~~~ 111 (552)
...|+..|||||++ ....++.++|+|||||++|+|++ |+ ||.......+.
T Consensus 162 ~~~~~~~y~aPE~~---------------~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~------------- 213 (260)
T cd05070 162 GAKFPIKWTAPEAA---------------LYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVL------------- 213 (260)
T ss_pred CCCCCccccChHHH---------------hcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHH-------------
Confidence 45577899999998 22456789999999999999999 88 99653322110
Q ss_pred hhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHH
Q 008820 112 LGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIR 163 (552)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~ 163 (552)
..+... ...+.......++.+++.+|+..+|.+||++.++.+.+.
T Consensus 214 ----~~~~~~---~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~ 258 (260)
T cd05070 214 ----EQVERG---YRMPCPQDCPISLHELMLQCWKKDPEERPTFEYLQSFLE 258 (260)
T ss_pred ----HHHHcC---CCCCCCCcCCHHHHHHHHHHcccCcccCcCHHHHHHHHh
Confidence 000000 000111123445899999999999999999998877654
No 354
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=99.28 E-value=2.6e-12 Score=123.00 Aligned_cols=114 Identities=14% Similarity=0.187 Sum_probs=75.8
Q ss_pred cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhh-CC-CchHHHhh
Q 008820 18 CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE-QFTKELID 95 (552)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~llt-g~-pf~~~~~~ 95 (552)
|+++.+...+.........|+..|||||++ . ...++.++|||||||++||+++ |+ ||......
T Consensus 162 g~~~~~~~~~~~~~~~~~~~~~~y~apE~~------~---------~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~ 226 (280)
T cd05043 162 ALSRDLFPMDYHCLGDNENRPVKWMALESL------V---------NKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPF 226 (280)
T ss_pred CCcccccCCceEEeCCCCCcchhccCHHHH------h---------cCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHH
Confidence 666655444332223445678899999998 2 2456789999999999999999 99 99764333
Q ss_pred hhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHHhhh
Q 008820 96 YIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELI 166 (552)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~~~~ 166 (552)
.+. ...... ...........++.+++.+|+..+|++||+..++.+.+..+.
T Consensus 227 ~~~-----------------~~~~~~---~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~ 277 (280)
T cd05043 227 EMA-----------------AYLKDG---YRLAQPINCPDELFAVMACCWALDPEERPSFSQLVQCLTDFH 277 (280)
T ss_pred HHH-----------------HHHHcC---CCCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHH
Confidence 111 000000 000011112335889999999999999999999998887654
No 355
>PHA03212 serine/threonine kinase US3; Provisional
Probab=99.28 E-value=4.4e-12 Score=126.84 Aligned_cols=44 Identities=16% Similarity=0.306 Sum_probs=37.7
Q ss_pred hhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cch
Q 008820 32 LSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFT 90 (552)
Q Consensus 32 ~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~ 90 (552)
...+.||+.|||||++ . ...+++++|||||||+||||+||+ ||-
T Consensus 240 ~~~~~gt~~y~aPE~~------~---------~~~~~~~~DiwSlGvil~elltg~~p~~ 284 (391)
T PHA03212 240 YYGWAGTIATNAPELL------A---------RDPYGPAVDIWSAGIVLFEMATCHDSLF 284 (391)
T ss_pred cccccCccCCCChhhh------c---------CCCCCcHHHHHHHHHHHHHHHHCCCCcC
Confidence 4567899999999998 2 245678999999999999999999 873
No 356
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=99.27 E-value=3.3e-12 Score=123.22 Aligned_cols=118 Identities=15% Similarity=0.183 Sum_probs=75.6
Q ss_pred hhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhh-CC-Cc
Q 008820 14 AKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE-QF 89 (552)
Q Consensus 14 ~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~llt-g~-pf 89 (552)
.|.+ |+++.+...+.........+++.|||||++ ....++.++|||||||++|||++ |. ||
T Consensus 171 ~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~---------------~~~~~~~~~Di~slG~il~el~~~g~~p~ 235 (293)
T cd05053 171 MKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEAL---------------FDRVYTHQSDVWSFGVLLWEIFTLGGSPY 235 (293)
T ss_pred EEeCccccccccccccceeccCCCCCCccccCHHHh---------------ccCCcCcccceeehhhHHHHHhcCCCCCC
Confidence 3444 455544433221112334567889999998 22456789999999999999998 88 99
Q ss_pred hHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHHhhh
Q 008820 90 TKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELI 166 (552)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~~~~ 166 (552)
.......+. ...... ...........++.+++.+|+..+|.+||++.++.+.+..+.
T Consensus 236 ~~~~~~~~~-----------------~~~~~~---~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~ 292 (293)
T cd05053 236 PGIPVEELF-----------------KLLKEG---YRMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML 292 (293)
T ss_pred CCCCHHHHH-----------------HHHHcC---CcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence 764433211 000000 000111123446889999999999999999999999887653
No 357
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=99.27 E-value=2.5e-12 Score=123.43 Aligned_cols=92 Identities=16% Similarity=0.154 Sum_probs=62.8
Q ss_pred hhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhhhhhhccccCCCchhhh
Q 008820 33 SDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDYIRCVSTKASDDNIAC 111 (552)
Q Consensus 33 ~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~~~~~~~~~~~~~~~~~ 111 (552)
....||+.|||||++ . ...++.++|+|||||++|||++|+ ||........
T Consensus 159 ~~~~g~~~~~aPE~~------~---------~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~-------------- 209 (285)
T cd05632 159 RGRVGTVGYMAPEVL------N---------NQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVK-------------- 209 (285)
T ss_pred cCCCCCcCccChHHh------c---------CCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHH--------------
Confidence 456899999999998 2 255678999999999999999999 9965322100
Q ss_pred hhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchh
Q 008820 112 LGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLT 156 (552)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~ 156 (552)
...+...+.............++.+++.+||+.+|.+||++.
T Consensus 210 ---~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~ 251 (285)
T cd05632 210 ---REEVDRRVLETEEVYSAKFSEEAKSICKMLLTKDPKQRLGCQ 251 (285)
T ss_pred ---HHHHHHhhhccccccCccCCHHHHHHHHHHccCCHhHcCCCc
Confidence 011111111111111222344588999999999999999954
No 358
>PRK03629 tolB translocation protein TolB; Provisional
Probab=99.27 E-value=3.3e-09 Score=107.26 Aligned_cols=231 Identities=8% Similarity=0.065 Sum_probs=140.4
Q ss_pred CcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCCEEEEEc--CCCcEEEEeCCCCCCCccccccccCCCceeeeEEEEe
Q 008820 272 KSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGD--SGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALT 349 (552)
Q Consensus 272 g~I~iwd~~~~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~--~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (552)
..|.+||.+.... +.+..+...+.+.+|+|++..++++.. .+..+.+|++.+++.. .+..+.... ....++
T Consensus 179 ~~l~~~d~dg~~~-~~lt~~~~~~~~p~wSPDG~~la~~s~~~g~~~i~i~dl~~G~~~-~l~~~~~~~-----~~~~~S 251 (429)
T PRK03629 179 YELRVSDYDGYNQ-FVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR-QVASFPRHN-----GAPAFS 251 (429)
T ss_pred eeEEEEcCCCCCC-EEeecCCCceeeeEEcCCCCEEEEEEecCCCcEEEEEECCCCCeE-EccCCCCCc-----CCeEEC
Confidence 3689999875443 444556778999999999887665543 3457899998765422 222222211 124799
Q ss_pred eCCCEEEEe-eCCC--cEEEEECCCCceeEEecCCCCCeEEEEEe-CC-EEEEEeCC-Cc--EEEEECCCCceeEEEecC
Q 008820 350 TSGRYLYTG-SGDR--TIKAWSLLDGTLSCTMSGHKSAVSTLAVC-NG-VLYSGSRD-GT--IRLWSLSDHSLLTVLEED 421 (552)
Q Consensus 350 ~~~~~l~sg-s~dg--~i~iwd~~~~~~~~~~~~h~~~v~~l~~~-~~-~l~s~~~d-g~--i~iwd~~~~~~~~~~~~~ 421 (552)
|+|+.|+.. +.+| .|++||+.+++.... ..+...+....|+ ++ .|+..+.+ +. |..+|+.+++.. .+...
T Consensus 252 PDG~~La~~~~~~g~~~I~~~d~~tg~~~~l-t~~~~~~~~~~wSPDG~~I~f~s~~~g~~~Iy~~d~~~g~~~-~lt~~ 329 (429)
T PRK03629 252 PDGSKLAFALSKTGSLNLYVMDLASGQIRQV-TDGRSNNTEPTWFPDSQNLAYTSDQAGRPQVYKVNINGGAPQ-RITWE 329 (429)
T ss_pred CCCCEEEEEEcCCCCcEEEEEECCCCCEEEc-cCCCCCcCceEECCCCCEEEEEeCCCCCceEEEEECCCCCeE-EeecC
Confidence 999977654 4454 589999988876544 3344567788999 43 66665543 44 555577666543 33222
Q ss_pred CCCceEEEEEEcCCCCEEEEEECC---CcEEEEeCCc-ceeeeec-ccceEEEEEecCCEEEEEeCCCe---EEEEecCC
Q 008820 422 SSGAVSSVLSLTAVQHTLVVSHES---GSIKVWRNDK-FMKSMQT-HKGSVFAVFLEGKWLFTGGWDKT---VSVQELAG 493 (552)
Q Consensus 422 ~~~~~~~~~~~s~~~~~l~~g~~d---g~i~iwd~~~-~~~~~~~-h~~~v~~v~~~~~~l~sgs~dg~---i~iwd~~~ 493 (552)
. .. .....++|||++++..+.+ ..|++||+.. ....+.. +...-.++++||++|+.++.++. +.++++.+
T Consensus 330 ~-~~-~~~~~~SpDG~~Ia~~~~~~g~~~I~~~dl~~g~~~~Lt~~~~~~~p~~SpDG~~i~~~s~~~~~~~l~~~~~~G 407 (429)
T PRK03629 330 G-SQ-NQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVLTDTFLDETPSIAPNGTMVIYSSSQGMGSVLNLVSTDG 407 (429)
T ss_pred C-CC-ccCEEECCCCCEEEEEEccCCCceEEEEECCCCCeEEeCCCCCCCCceECCCCCEEEEEEcCCCceEEEEEECCC
Confidence 1 12 2235899999998876543 3578888643 2333322 21222345679999999988764 67778865
Q ss_pred CeeeeeeccCCCcccCcceEEEEEeC
Q 008820 494 DEFEEDVIPTGAIPCGSVITALLYWQ 519 (552)
Q Consensus 494 ~~~~~~~~~~~~~~~~~~v~~l~~~~ 519 (552)
...... ... ...+...+|+|
T Consensus 408 ~~~~~l-~~~-----~~~~~~p~Wsp 427 (429)
T PRK03629 408 RFKARL-PAT-----DGQVKFPAWSP 427 (429)
T ss_pred CCeEEC-ccC-----CCCcCCcccCC
Confidence 533322 211 33455666664
No 359
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.27 E-value=3.4e-12 Score=123.98 Aligned_cols=97 Identities=18% Similarity=0.232 Sum_probs=67.7
Q ss_pred ccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhh-CC-CchHHHhhhhhhccccCCCchhhhh
Q 008820 35 FLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE-QFTKELIDYIRCVSTKASDDNIACL 112 (552)
Q Consensus 35 ~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~llt-g~-pf~~~~~~~~~~~~~~~~~~~~~~~ 112 (552)
..+++.|||||++ .+ ..++.++|+|||||++|||++ |. ||.......+.
T Consensus 202 ~~~~~~y~aPE~~------~~---------~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~~~~~-------------- 252 (307)
T cd05098 202 GRLPVKWMAPEAL------FD---------RIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF-------------- 252 (307)
T ss_pred CCCccceeChHHh------cc---------CCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHH--------------
Confidence 3456899999998 22 456789999999999999998 77 98664433111
Q ss_pred hhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHHhhh
Q 008820 113 GMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELI 166 (552)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~~~~ 166 (552)
...... ...........++.+++.+||..+|.+||++.++.+.+.++.
T Consensus 253 ---~~~~~~---~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~ 300 (307)
T cd05098 253 ---KLLKEG---HRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 300 (307)
T ss_pred ---HHHHcC---CCCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHH
Confidence 000000 000111123445889999999999999999999999888765
No 360
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=99.27 E-value=2.5e-12 Score=121.47 Aligned_cols=94 Identities=20% Similarity=0.350 Sum_probs=65.1
Q ss_pred hhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhhhhhhccccCCCchhh
Q 008820 32 LSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDYIRCVSTKASDDNIA 110 (552)
Q Consensus 32 ~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~~~~~~~~~~~~~~~~ 110 (552)
.....|++.|||||++ . ....+.++|||||||++|+|++|+ ||.......+.
T Consensus 159 ~~~~~~~~~y~aPE~~------~---------~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~------------ 211 (257)
T cd08223 159 ASTLIGTPYYMSPELF------S---------NKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLV------------ 211 (257)
T ss_pred cccccCCcCccChhHh------c---------CCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHH------------
Confidence 4567899999999998 2 345678999999999999999999 99764433110
Q ss_pred hhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 111 CLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
....... ...........+.+++.+|++.+|.+||++.++.+
T Consensus 212 ----~~~~~~~----~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 253 (257)
T cd08223 212 ----YRIIEGK----LPPMPKDYSPELGELIATMLSKRPEKRPSVKSILR 253 (257)
T ss_pred ----HHHHhcC----CCCCccccCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 0000000 00011123345889999999999999999877654
No 361
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=99.27 E-value=3.4e-12 Score=121.71 Aligned_cols=113 Identities=12% Similarity=0.085 Sum_probs=72.4
Q ss_pred cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhh-CC-CchHHHhh
Q 008820 18 CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE-QFTKELID 95 (552)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~llt-g~-pf~~~~~~ 95 (552)
|+++.+.............+++.|||||++ . ...++.++|||||||++|||++ |+ ||......
T Consensus 157 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~------~---------~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~ 221 (272)
T cd05075 157 GLSKKIYNGDYYRQGRIAKMPVKWIAIESL------A---------DRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENS 221 (272)
T ss_pred CcccccCcccceecCCcccCCcccCCHHHc------c---------CCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHH
Confidence 555555433221112233567899999998 2 3556789999999999999999 78 99653322
Q ss_pred hhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHHhh
Q 008820 96 YIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIREL 165 (552)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~~~ 165 (552)
.+. ....... ...........+.+++.+||+.+|++||++.++.+.+..+
T Consensus 222 ~~~-----------------~~~~~~~---~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 222 EIY-----------------DYLRQGN---RLKQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA 271 (272)
T ss_pred HHH-----------------HHHHcCC---CCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 110 0000000 0001112234588999999999999999999998887653
No 362
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=99.27 E-value=3.3e-12 Score=123.00 Aligned_cols=99 Identities=14% Similarity=0.184 Sum_probs=69.6
Q ss_pred hhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhh-CC-CchHHHhhhhhhccccCCCchhh
Q 008820 33 SDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE-QFTKELIDYIRCVSTKASDDNIA 110 (552)
Q Consensus 33 ~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~llt-g~-pf~~~~~~~~~~~~~~~~~~~~~ 110 (552)
....+++.|||||++ . ...++.++|||||||++|||+| |+ ||.+.....+.
T Consensus 187 ~~~~~~~~y~apE~~------~---------~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~------------ 239 (290)
T cd05045 187 SKGRIPVKWMAIESL------F---------DHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPERLF------------ 239 (290)
T ss_pred cCCCCCccccCHHHH------c---------cCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCHHHHH------------
Confidence 344668899999998 2 2456789999999999999999 99 99764433211
Q ss_pred hhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHHhhh
Q 008820 111 CLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELI 166 (552)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~~~~ 166 (552)
... .... ..........++.+++.+||+.+|.+||++.++...+.++.
T Consensus 240 -----~~~-~~~~--~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~ 287 (290)
T cd05045 240 -----NLL-KTGY--RMERPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMM 287 (290)
T ss_pred -----HHH-hCCC--CCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHH
Confidence 000 0000 00111223346889999999999999999999999888765
No 363
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=99.27 E-value=3.7e-12 Score=126.38 Aligned_cols=61 Identities=18% Similarity=0.399 Sum_probs=46.0
Q ss_pred hhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cch
Q 008820 14 AKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFT 90 (552)
Q Consensus 14 ~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~ 90 (552)
.|++ |+++...... ......||+.|||||++ .| ..++.++|||||||+||+|++|+ ||.
T Consensus 158 ~kl~Dfg~~~~~~~~~---~~~~~~~t~~y~aPE~~------~~---------~~~~~~~DiwslG~il~el~~g~~pf~ 219 (355)
T cd07874 158 LKILDFGLARTAGTSF---MMTPYVVTRYYRAPEVI------LG---------MGYKENVDIWSVGCIMGEMVRHKILFP 219 (355)
T ss_pred EEEeeCcccccCCCcc---ccCCccccCCccCHHHH------cC---------CCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence 4555 5555443332 24567899999999998 32 45678999999999999999999 996
Q ss_pred HH
Q 008820 91 KE 92 (552)
Q Consensus 91 ~~ 92 (552)
+.
T Consensus 220 ~~ 221 (355)
T cd07874 220 GR 221 (355)
T ss_pred CC
Confidence 53
No 364
>KOG2394 consensus WD40 protein DMR-N9 [General function prediction only]
Probab=99.26 E-value=1.9e-10 Score=110.09 Aligned_cols=159 Identities=17% Similarity=0.229 Sum_probs=118.1
Q ss_pred eecCcceEEEeeCCCeEEEEEe-----------ec--CccceEEEEEc---CCEEEEEeCCCcEEEEeCCC---------
Q 008820 227 AAGGVKDLVNGLSKGNVKFKDL-----------QG--HRDCVTGLAVG---GGFLFSSSFDKSIHVWSLKD--------- 281 (552)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~l-----------~~--H~~~V~~l~~s---~~~l~s~s~dg~I~iwd~~~--------- 281 (552)
..+.+-.++.+...+.+++.+. .. .+..|+|+.|- ...++.+-.+|.+.+||.+-
T Consensus 181 a~~~g~dllIGf~tGqvq~idp~~~~~sklfne~r~i~ktsvT~ikWvpg~~~~Fl~a~~sGnlyly~~~~~~~~t~p~~ 260 (636)
T KOG2394|consen 181 ATPKGLDLLIGFTTGQVQLIDPINFEVSKLFNEERLINKSSVTCIKWVPGSDSLFLVAHASGNLYLYDKEIVCGATAPSY 260 (636)
T ss_pred cCCCCcceEEeeccCceEEecchhhHHHHhhhhcccccccceEEEEEEeCCCceEEEEEecCceEEeeccccccCCCCcc
Confidence 3455666777777777665542 11 34789999997 66777788899999997531
Q ss_pred -----Ce--------------EEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCccccccccCCCcee
Q 008820 282 -----FS--------------HVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRY 342 (552)
Q Consensus 282 -----~~--------------~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~ 342 (552)
+. ++..+.--.+.|+..+|+|++ .+||+.+.||.+||+|+.+.......+.+.+.
T Consensus 261 ~~~k~~~~f~i~t~ksk~~rNPv~~w~~~~g~in~f~FS~DG-~~LA~VSqDGfLRvF~fdt~eLlg~mkSYFGG----- 334 (636)
T KOG2394|consen 261 QALKDGDQFAILTSKSKKTRNPVARWHIGEGSINEFAFSPDG-KYLATVSQDGFLRIFDFDTQELLGVMKSYFGG----- 334 (636)
T ss_pred cccCCCCeeEEeeeeccccCCccceeEeccccccceeEcCCC-ceEEEEecCceEEEeeccHHHHHHHHHhhccc-----
Confidence 11 111122234578899999955 58899999999999999875544444433322
Q ss_pred eeEEEEeeCCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe
Q 008820 343 SGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC 391 (552)
Q Consensus 343 ~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~ 391 (552)
--+.+++|||++|++|++|-.|.+|.+..++.+..=.+|++.|+.++|+
T Consensus 335 LLCvcWSPDGKyIvtGGEDDLVtVwSf~erRVVARGqGHkSWVs~VaFD 383 (636)
T KOG2394|consen 335 LLCVCWSPDGKYIVTGGEDDLVTVWSFEERRVVARGQGHKSWVSVVAFD 383 (636)
T ss_pred eEEEEEcCCccEEEecCCcceEEEEEeccceEEEeccccccceeeEeec
Confidence 2356899999999999999999999999999999999999999999996
No 365
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=99.26 E-value=3e-12 Score=122.51 Aligned_cols=118 Identities=13% Similarity=0.139 Sum_probs=75.7
Q ss_pred hhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhh-CC-Cc
Q 008820 14 AKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE-QF 89 (552)
Q Consensus 14 ~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~llt-g~-pf 89 (552)
+|.+ |+++.+...........-.+++.|||||++ . ...++.++|||||||+||||++ |. ||
T Consensus 148 ~kL~dfG~~~~~~~~~~~~~~~~~~~~~~y~~PE~~------~---------~~~~~~~~Di~slG~~l~el~t~g~~p~ 212 (279)
T cd05109 148 VKITDFGLARLLDIDETEYHADGGKVPIKWMALESI------L---------HRRFTHQSDVWSYGVTVWELMTFGAKPY 212 (279)
T ss_pred EEECCCCceeecccccceeecCCCccchhhCCHHHh------c---------cCCCCchhHHHHHHHHHHHHHcCCCCCC
Confidence 4655 555555433222112334567899999998 2 3557789999999999999998 88 98
Q ss_pred hHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHHhhh
Q 008820 90 TKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELI 166 (552)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~~~~ 166 (552)
.......+. ..+.... ..+........+.+++.+|++.+|++||++.++.+.+..+.
T Consensus 213 ~~~~~~~~~-----------------~~~~~~~---~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~ 269 (279)
T cd05109 213 DGIPAREIP-----------------DLLEKGE---RLPQPPICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMA 269 (279)
T ss_pred CCCCHHHHH-----------------HHHHCCC---cCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhh
Confidence 653322110 0000000 00011123345889999999999999999999998877664
No 366
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.26 E-value=1.8e-12 Score=125.06 Aligned_cols=96 Identities=16% Similarity=0.252 Sum_probs=64.3
Q ss_pred hhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhhhhhhccccCCCchhh
Q 008820 32 LSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDYIRCVSTKASDDNIA 110 (552)
Q Consensus 32 ~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~~~~~~~~~~~~~~~~ 110 (552)
.+...|++.|||||.+ . ....++++|||||||++|+|++|+ ||.........
T Consensus 173 ~~~~~~~~~y~aPE~~------~---------~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~------------ 225 (296)
T cd06654 173 RSTMVGTPYWMAPEVV------T---------RKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRAL------------ 225 (296)
T ss_pred cCcccCCccccCHHHH------c---------CCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhH------------
Confidence 3456899999999998 2 244568999999999999999999 99654322100
Q ss_pred hhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 111 CLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
........+ +..........+.+++.+||..+|.+||++.++..
T Consensus 226 ----~~~~~~~~~--~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~ 269 (296)
T cd06654 226 ----YLIATNGTP--ELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQ 269 (296)
T ss_pred ----HHHhcCCCC--CCCCccccCHHHHHHHHHHCcCCcccCcCHHHHhh
Confidence 000000000 00001112334889999999999999999887766
No 367
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=99.26 E-value=2.9e-12 Score=122.52 Aligned_cols=110 Identities=15% Similarity=0.151 Sum_probs=71.6
Q ss_pred cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhh-CC-CchHHHhh
Q 008820 18 CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE-QFTKELID 95 (552)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~llt-g~-pf~~~~~~ 95 (552)
|+++.+...+.....+...||+.|+|||++ .....++++|||||||++|||+| |+ ||......
T Consensus 164 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~---------------~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~ 228 (277)
T cd05032 164 GMTRDIYETDYYRKGGKGLLPVRWMAPESL---------------KDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNE 228 (277)
T ss_pred ccchhhccCcccccCCCCCccccccCHHHH---------------hcCCCCcccchHHHHHHHHHhhccCCCCCccCCHH
Confidence 445554443322223456678999999998 23456789999999999999998 88 99654333
Q ss_pred hhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHH
Q 008820 96 YIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCI 162 (552)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l 162 (552)
.+. ...... ............+.+++.+||+.+|++||++.++...+
T Consensus 229 ~~~-----------------~~~~~~---~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l 275 (277)
T cd05032 229 EVL-----------------KFVIDG---GHLDLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSL 275 (277)
T ss_pred HHH-----------------HHHhcC---CCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHh
Confidence 110 000000 00001111234588999999999999999999887764
No 368
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=99.26 E-value=3.8e-12 Score=124.12 Aligned_cols=119 Identities=13% Similarity=0.145 Sum_probs=77.6
Q ss_pred hhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhh-CC-Cc
Q 008820 14 AKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE-QF 89 (552)
Q Consensus 14 ~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~llt-g~-pf 89 (552)
+|+. |+++.+...+...-.....+++.|||||++ ....++.++|||||||+||||++ |+ ||
T Consensus 148 ~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~apE~~---------------~~~~~~~~~Di~slGv~l~el~t~g~~p~ 212 (316)
T cd05108 148 VKITDFGLAKLLGADEKEYHAEGGKVPIKWMALESI---------------LHRIYTHQSDVWSYGVTVWELMTFGSKPY 212 (316)
T ss_pred EEEccccccccccCCCcceeccCCccceeecChHHh---------------ccCCCCchhhhHHHHHHHHHHHcCCCCCC
Confidence 4555 556655443322112334457889999998 23556789999999999999998 99 99
Q ss_pred hHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHHhhhc
Q 008820 90 TKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELII 167 (552)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~~~~~ 167 (552)
.+.....+. ....... ..+.......++.+++.+|++.+|.+||++.++...+..+..
T Consensus 213 ~~~~~~~~~------------------~~~~~~~--~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~ 270 (316)
T cd05108 213 DGIPASEIS------------------SILEKGE--RLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 270 (316)
T ss_pred CCCCHHHHH------------------HHHhCCC--CCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHc
Confidence 764333111 0000000 001112234458899999999999999999999998877653
No 369
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=99.26 E-value=3.4e-12 Score=120.94 Aligned_cols=112 Identities=18% Similarity=0.145 Sum_probs=72.5
Q ss_pred cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhh-CC-CchHHHhh
Q 008820 18 CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE-QFTKELID 95 (552)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~llt-g~-pf~~~~~~ 95 (552)
|+++.+...+.. ......|++.|||||++ ....++.++|||||||++|||+| |+ ||......
T Consensus 147 g~~~~~~~~~~~-~~~~~~~~~~y~~PE~~---------------~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~ 210 (262)
T cd05071 147 GLARLIEDNEYT-ARQGAKFPIKWTAPEAA---------------LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR 210 (262)
T ss_pred Cceeeccccccc-cccCCcccceecCHhHh---------------ccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChH
Confidence 445444433321 12345678899999998 23556789999999999999999 78 99654322
Q ss_pred hhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHHhh
Q 008820 96 YIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIREL 165 (552)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~~~ 165 (552)
.+. ...... ............+.+++.+|++.+|.+||+..++...+...
T Consensus 211 ~~~-----------------~~~~~~---~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~ 260 (262)
T cd05071 211 EVL-----------------DQVERG---YRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY 260 (262)
T ss_pred HHH-----------------HHHhcC---CCCCCccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHHh
Confidence 110 000000 00000111233588999999999999999999988877654
No 370
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=99.26 E-value=1.6e-12 Score=129.32 Aligned_cols=69 Identities=20% Similarity=0.310 Sum_probs=47.9
Q ss_pred hhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cch
Q 008820 14 AKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFT 90 (552)
Q Consensus 14 ~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~ 90 (552)
.|+. |+++.+...... -.....||+.|||||++.... ....++.++|||||||+||||++|+ ||.
T Consensus 181 ikL~DfG~a~~~~~~~~~-~~~~~~gt~~y~aPE~l~~~~-----------~~~~~~~~~DiwSlGvilyell~G~~Pf~ 248 (371)
T cd05622 181 LKLADFGTCMKMNKEGMV-RCDTAVGTPDYISPEVLKSQG-----------GDGYYGRECDWWSVGVFLYEMLVGDTPFY 248 (371)
T ss_pred EEEEeCCceeEcCcCCcc-cccCcccCccccCHHHHhccC-----------CCccCCCccceeehhHHHHHHHhCCCCCC
Confidence 4555 556555433221 134678999999999993110 1134678999999999999999999 997
Q ss_pred HHHh
Q 008820 91 KELI 94 (552)
Q Consensus 91 ~~~~ 94 (552)
..+.
T Consensus 249 ~~~~ 252 (371)
T cd05622 249 ADSL 252 (371)
T ss_pred CCCH
Confidence 6543
No 371
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.26 E-value=4.3e-12 Score=123.11 Aligned_cols=113 Identities=13% Similarity=0.187 Sum_probs=75.4
Q ss_pred cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhh-CC-CchHHHhh
Q 008820 18 CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE-QFTKELID 95 (552)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~llt-g~-pf~~~~~~ 95 (552)
|+++.+.............|++.|||||++ . ...++.++|||||||+||+|++ |. ||......
T Consensus 182 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~------~---------~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~ 246 (304)
T cd05101 182 GLARDVNNIDYYKKTTNGRLPVKWMAPEAL------F---------DRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE 246 (304)
T ss_pred ccceecccccccccccCCCCCceeeCchhh------c---------cCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHH
Confidence 455555433322223445678899999998 2 2456789999999999999998 77 99764433
Q ss_pred hhhhccccCCCchhhhhhhhHHHHHHHHHHH-hhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHHhhh
Q 008820 96 YIRCVSTKASDDNIACLGMYMAWMEKVTYLL-ENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELI 166 (552)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~~~~ 166 (552)
.+. ....... .........++.+++.+|++.+|.+||++.++.+.+.++.
T Consensus 247 ~~~---------------------~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~ 297 (304)
T cd05101 247 ELF---------------------KLLKEGHRMDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRIL 297 (304)
T ss_pred HHH---------------------HHHHcCCcCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHH
Confidence 211 0000000 0011123345889999999999999999999999988765
No 372
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.26 E-value=2e-12 Score=126.96 Aligned_cols=47 Identities=26% Similarity=0.514 Sum_probs=39.3
Q ss_pred hhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHh
Q 008820 33 SDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELI 94 (552)
Q Consensus 33 ~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~ 94 (552)
....||+.|||||++ .| ..++.++|+|||||++|||++|+ ||.....
T Consensus 160 ~~~~~~~~y~aPE~~------~~---------~~~~~~~DvwslG~il~~l~~g~~p~~~~~~ 207 (333)
T cd06650 160 NSFVGTRSYMSPERL------QG---------THYSVQSDIWSMGLSLVEMAIGRYPIPPPDA 207 (333)
T ss_pred ccCCCCccccCHHHh------cC---------CCCCcHHHHHHHHHHHHHHHHCCCCCCCcch
Confidence 456899999999998 32 45678999999999999999999 9965443
No 373
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=99.26 E-value=1.9e-12 Score=124.06 Aligned_cols=99 Identities=16% Similarity=0.203 Sum_probs=64.0
Q ss_pred hhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhhhhhhccccCCCchhhh
Q 008820 33 SDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDYIRCVSTKASDDNIAC 111 (552)
Q Consensus 33 ~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~~~~~~~~~~~~~~~~~ 111 (552)
....|++.|+|||++... ......++.++|+|||||++|||++|+ ||.........
T Consensus 179 ~~~~~~~~y~aPE~l~~~----------~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~------------- 235 (282)
T cd06636 179 NTFIGTPYWMAPEVIACD----------ENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRAL------------- 235 (282)
T ss_pred CcccccccccCHhhcCcc----------cCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhh-------------
Confidence 457799999999998211 011345668999999999999999999 99653322100
Q ss_pred hhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 112 LGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
.. . .. ...+.........++.+++.+||+.+|.+||+..++.+
T Consensus 236 ---~~-~-~~-~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~ 278 (282)
T cd06636 236 ---FL-I-PR-NPPPKLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLK 278 (282)
T ss_pred ---hh-H-hh-CCCCCCcccccCHHHHHHHHHHhCCChhhCcCHHHHhc
Confidence 00 0 00 00000011123345899999999999999999877644
No 374
>KOG0974 consensus WD-repeat protein WDR6, WD repeat superfamily [General function prediction only]
Probab=99.26 E-value=5e-10 Score=115.47 Aligned_cols=266 Identities=15% Similarity=0.144 Sum_probs=171.6
Q ss_pred cceEEEEEcCCEEEEEeCCCcEEEEeCCCCeEEEEE------eCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCC
Q 008820 253 DCVTGLAVGGGFLFSSSFDKSIHVWSLKDFSHVHTF------KGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPL 326 (552)
Q Consensus 253 ~~V~~l~~s~~~l~s~s~dg~I~iwd~~~~~~~~~~------~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~ 326 (552)
+++++.++-.++|+.|+. -.|.+||+.++..+..+ ..|...=.--.+ + ..++++..-+.+..=+....
T Consensus 8 ~~l~~~~~~~~~llag~g-p~i~~yd~~s~~li~~~~~~~~~~~H~~e~~~~l~---~-~~~v~~~~~~~v~~~~~~~~- 81 (967)
T KOG0974|consen 8 GPLNLPQLVSDYLLAGSG-PEILVYDLSSGCLIRHLIQSKILEVHRGEGKVKLL---S-GKIVTCAKSDEVYVKEASNQ- 81 (967)
T ss_pred ccccchhhccceeeecCC-CceEEeeCCchhHhhhhhhhcccccccccccceec---c-ceEEEEEeecceeecchhhh-
Confidence 445555554567776654 36999999988665443 334111000011 1 13444444333333222110
Q ss_pred CCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCe-EE-EEEe--CC--EEEEEeC
Q 008820 327 GHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAV-ST-LAVC--NG--VLYSGSR 400 (552)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v-~~-l~~~--~~--~l~s~~~ 400 (552)
....+... . . -..+......++.++.++.+.+||...+.....+....... .+ +-+- .+ ++++|+.
T Consensus 82 ---~~~~~s~w---i-~-g~~l~~e~k~i~l~~~~ns~~i~d~~~~~~~~~i~~~er~~l~~~~~~g~s~~~~~i~~gsv 153 (967)
T KOG0974|consen 82 ---IIERFSDW---I-F-GAKLFEENKKIALVTSRNSLLIRDSKNSSVLSKIQSDERCTLYSSLIIGDSAEELYIASGSV 153 (967)
T ss_pred ---hhhhcccc---c-c-ccchhhhcceEEEEEcCceEEEEecccCceehhcCCCceEEEEeEEEEeccCcEEEEEeccc
Confidence 01111110 0 0 03455667789999999999999998877776665332211 11 1121 22 8999999
Q ss_pred CCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEECCCcEEEEeCCc---ceeeeecccceEEEEEecCCEE
Q 008820 401 DGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDK---FMKSMQTHKGSVFAVFLEGKWL 477 (552)
Q Consensus 401 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~~---~~~~~~~h~~~v~~v~~~~~~l 477 (552)
-+.|.+|+....+.-..+.+| .+.+.. +.++.||+++++.+.|.++++|++.. .....-+|+..|..+.+....+
T Consensus 154 ~~~iivW~~~~dn~p~~l~GH-eG~iF~-i~~s~dg~~i~s~SdDRsiRlW~i~s~~~~~~~~fgHsaRvw~~~~~~n~i 231 (967)
T KOG0974|consen 154 FGEIIVWKPHEDNKPIRLKGH-EGSIFS-IVTSLDGRYIASVSDDRSIRLWPIDSREVLGCTGFGHSARVWACCFLPNRI 231 (967)
T ss_pred cccEEEEeccccCCcceeccc-CCceEE-EEEccCCcEEEEEecCcceeeeecccccccCcccccccceeEEEEecccee
Confidence 999999999743333335554 566666 58899999999999999999998654 2235568999999999866699
Q ss_pred EEEeCCCeEEEEecCCCeeeeeeccCCCcccCcceEEEEEeCCe--EEEEeCCCeEEEEEecCC
Q 008820 478 FTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQGK--LFVGCADRTVKIALCNRQ 539 (552)
Q Consensus 478 ~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~--l~s~s~Dg~v~iw~~~~~ 539 (552)
+|++.|.+.++|+.+...+.....+. ...+..++..++. ++|++.||.+++|++...
T Consensus 232 ~t~gedctcrvW~~~~~~l~~y~~h~-----g~~iw~~~~~~~~~~~vT~g~Ds~lk~~~l~~r 290 (967)
T KOG0974|consen 232 ITVGEDCTCRVWGVNGTQLEVYDEHS-----GKGIWKIAVPIGVIIKVTGGNDSTLKLWDLNGR 290 (967)
T ss_pred EEeccceEEEEEecccceehhhhhhh-----hcceeEEEEcCCceEEEeeccCcchhhhhhhcc
Confidence 99999999999988876665322222 4558888888654 889999999999998743
No 375
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.26 E-value=4.7e-12 Score=123.35 Aligned_cols=113 Identities=14% Similarity=0.195 Sum_probs=73.4
Q ss_pred cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhh-CC-CchHHHhh
Q 008820 18 CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE-QFTKELID 95 (552)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~llt-g~-pf~~~~~~ 95 (552)
|+++.+.............+++.|||||++ . ...++.++|||||||++|||++ |. ||......
T Consensus 179 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~------~---------~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~ 243 (314)
T cd05099 179 GLARGVHDIDYYKKTSNGRLPVKWMAPEAL------F---------DRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVE 243 (314)
T ss_pred cccccccccccccccccCCCCccccCHHHH------c---------cCCcCccchhhHHHHHHHHHHhCCCCCCCCCCHH
Confidence 555555433221112233456789999998 2 2456789999999999999999 88 99664332
Q ss_pred hhhhccccCCCchhhhhhhhHHHHHHHHHHH-hhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHHhhh
Q 008820 96 YIRCVSTKASDDNIACLGMYMAWMEKVTYLL-ENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELI 166 (552)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~~~~ 166 (552)
.+. ....... .........++.+++.+||..+|.+||++.++...+.++.
T Consensus 244 ~~~---------------------~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~ 294 (314)
T cd05099 244 ELF---------------------KLLREGHRMDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVL 294 (314)
T ss_pred HHH---------------------HHHHcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHH
Confidence 111 0000000 0011122345889999999999999999999998887764
No 376
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=99.26 E-value=2.9e-12 Score=121.01 Aligned_cols=95 Identities=13% Similarity=0.135 Sum_probs=66.0
Q ss_pred ccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhh-CC-CchHHHhhhhhhccccCCCchhhhh
Q 008820 35 FLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE-QFTKELIDYIRCVSTKASDDNIACL 112 (552)
Q Consensus 35 ~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~llt-g~-pf~~~~~~~~~~~~~~~~~~~~~~~ 112 (552)
-.+++.|||||.+ .....+.++|+|||||++|||++ |+ ||.......+.
T Consensus 158 ~~~~~~y~aPE~~---------------~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~-------------- 208 (257)
T cd05116 158 GKWPVKWYAPECM---------------NYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVT-------------- 208 (257)
T ss_pred CCCCccccCHhHh---------------ccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHH--------------
Confidence 3457899999998 22456689999999999999998 99 99653322110
Q ss_pred hhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHHh
Q 008820 113 GMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRE 164 (552)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~~ 164 (552)
....... ..........++.+++.+|++.+|++||++.++.+.+..
T Consensus 209 ---~~i~~~~---~~~~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~ 254 (257)
T cd05116 209 ---QMIESGE---RMECPQRCPPEMYDLMKLCWTYGVDERPGFAVVELRLRN 254 (257)
T ss_pred ---HHHHCCC---CCCCCCCCCHHHHHHHHHHhccCchhCcCHHHHHHHHhc
Confidence 0000000 001112244569999999999999999999998887654
No 377
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=99.26 E-value=1.5e-12 Score=130.36 Aligned_cols=46 Identities=26% Similarity=0.498 Sum_probs=39.5
Q ss_pred hhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHH
Q 008820 33 SDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKEL 93 (552)
Q Consensus 33 ~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~ 93 (552)
..+.||+.|||||++ . ...++.++|||||||+||||++|+ ||....
T Consensus 202 ~~~~gt~~y~aPE~~------~---------~~~~~~~~DiwSlGvilyell~G~~Pf~~~~ 248 (376)
T cd05598 202 HSLVGTPNYIAPEVL------L---------RTGYTQLCDWWSVGVILYEMLVGQPPFLADT 248 (376)
T ss_pred cccCCCccccCHHHH------c---------CCCCCcceeeeeccceeeehhhCCCCCCCCC
Confidence 467899999999999 2 245678999999999999999999 997644
No 378
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=99.25 E-value=1.8e-12 Score=115.98 Aligned_cols=115 Identities=18% Similarity=0.160 Sum_probs=83.0
Q ss_pred hcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchH
Q 008820 15 KVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTK 91 (552)
Q Consensus 15 ~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~ 91 (552)
|.+ ||||+-.... .+.+-+=||-|.|||++ ...+++..||+|||||++|-||+|. ||..
T Consensus 204 KLtDfGFAK~t~~~~---~L~TPc~TPyYvaPevl---------------g~eKydkscdmwSlgVimYIlLCGyPPFYS 265 (400)
T KOG0604|consen 204 KLTDFGFAKETQEPG---DLMTPCFTPYYVAPEVL---------------GPEKYDKSCDMWSLGVIMYILLCGYPPFYS 265 (400)
T ss_pred EecccccccccCCCc---cccCCcccccccCHHHh---------------CchhcCCCCCccchhHHHHHhhcCCCcccc
Confidence 444 7786655422 36667779999999998 4577889999999999999999999 9965
Q ss_pred HHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 92 ELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
..-..| ...+...++..-.++|.+.|.-.+...+++|+++|..+|.+|-+..++..
T Consensus 266 ~hg~ai-------------spgMk~rI~~gqy~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~ 321 (400)
T KOG0604|consen 266 NHGLAI-------------SPGMKRRIRTGQYEFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMD 321 (400)
T ss_pred cCCccC-------------ChhHHhHhhccCccCCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhc
Confidence 322111 11333444444455555555555566899999999999999999887655
No 379
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=99.25 E-value=4e-12 Score=119.98 Aligned_cols=96 Identities=16% Similarity=0.194 Sum_probs=66.4
Q ss_pred hccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhh-CC-CchHHHhhhhhhccccCCCchhhh
Q 008820 34 DFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE-QFTKELIDYIRCVSTKASDDNIAC 111 (552)
Q Consensus 34 ~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~llt-g~-pf~~~~~~~~~~~~~~~~~~~~~~ 111 (552)
...+++.|||||++ . ...++.++|||||||++|||++ |+ ||.......+.
T Consensus 158 ~~~~~~~y~aPE~~------~---------~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~~------------- 209 (256)
T cd05082 158 TGKLPVKWTAPEAL------R---------EKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVV------------- 209 (256)
T ss_pred CCccceeecCHHHH------c---------cCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHH-------------
Confidence 44567899999998 2 2456789999999999999998 99 99654433111
Q ss_pred hhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHHh
Q 008820 112 LGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRE 164 (552)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~~ 164 (552)
...... ............+.+++.+|++.+|++||++.++.+.+..
T Consensus 210 ----~~~~~~---~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 255 (256)
T cd05082 210 ----PRVEKG---YKMDAPDGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEH 255 (256)
T ss_pred ----HHHhcC---CCCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhc
Confidence 000000 0001112234458899999999999999999998887654
No 380
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=99.25 E-value=1.5e-12 Score=127.79 Aligned_cols=119 Identities=13% Similarity=0.093 Sum_probs=70.6
Q ss_pred hhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cch
Q 008820 14 AKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFT 90 (552)
Q Consensus 14 ~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~ 90 (552)
+|+. |+++.+...... ......||+.|||||++...... ....++.++|||||||+||||++|+ ||.
T Consensus 141 ~kL~Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~---------~~~~~~~~~DiwslG~il~el~~g~~Pf~ 210 (330)
T cd05601 141 IKLADFGSAARLTANKMV-NSKLPVGTPDYIAPEVLTTMNGD---------GKGTYGVECDWWSLGVIAYEMIYGRSPFH 210 (330)
T ss_pred EEeccCCCCeECCCCCce-eeecccCCccccCHHHhcccccc---------ccCCCCCcceeecccceeeeeccCCCCCC
Confidence 4444 555555433221 23445899999999998211100 1245678999999999999999999 996
Q ss_pred HHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 91 KELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
..+..... ..+.........+.......++.+++.+||+ +|.+||+..++..
T Consensus 211 ~~~~~~~~-----------------~~i~~~~~~~~~~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~ 262 (330)
T cd05601 211 EGTSAKTY-----------------NNIMNFQRFLKFPEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCC 262 (330)
T ss_pred CCCHHHHH-----------------HHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhC
Confidence 54332110 0000000000000111233458899999997 9999999876543
No 381
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=99.25 E-value=4.1e-12 Score=123.17 Aligned_cols=115 Identities=17% Similarity=0.168 Sum_probs=64.2
Q ss_pred hhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHh--hhhh---hccccCC
Q 008820 32 LSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELI--DYIR---CVSTKAS 105 (552)
Q Consensus 32 ~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~--~~~~---~~~~~~~ 105 (552)
.....||+.|||||++ .+ ...++.++|||||||+||||++|+ ||.+... ..+. .+-....
T Consensus 160 ~~~~~~~~~y~aPE~~------~~--------~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 225 (303)
T cd07869 160 YSNEVVTLWYRPPDVL------LG--------STEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPN 225 (303)
T ss_pred CCCCcccCCCCChHHH------cC--------CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCC
Confidence 3556799999999998 22 234567899999999999999999 9964211 1110 0001111
Q ss_pred CchhhhhhhhHHHHHH-----HHHHHhhh--hcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 106 DDNIACLGMYMAWMEK-----VTYLLENK--FGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 106 ~~~~~~~~~~~~~~~~-----~~~~~~~~--~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
...|............ .+...... .......+.+++.+||+.+|.+||++.++..
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~ 287 (303)
T cd07869 226 EDTWPGVHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALS 287 (303)
T ss_pred hhhccchhhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhc
Confidence 1111100000000000 00000000 0012235789999999999999999877654
No 382
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=99.25 E-value=3.8e-12 Score=120.47 Aligned_cols=96 Identities=17% Similarity=0.130 Sum_probs=66.1
Q ss_pred hccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhh-CC-CchHHHhhhhhhccccCCCchhhh
Q 008820 34 DFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE-QFTKELIDYIRCVSTKASDDNIAC 111 (552)
Q Consensus 34 ~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~llt-g~-pf~~~~~~~~~~~~~~~~~~~~~~ 111 (552)
...+++.|||||++ . ....+.++|+|||||++|||+| |+ ||.......+.
T Consensus 162 ~~~~~~~y~~Pe~~------~---------~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~------------- 213 (260)
T cd05069 162 GAKFPIKWTAPEAA------L---------YGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVL------------- 213 (260)
T ss_pred CCccchhhCCHHHh------c---------cCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHH-------------
Confidence 44578899999998 2 2556789999999999999999 88 99654322110
Q ss_pred hhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHHh
Q 008820 112 LGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRE 164 (552)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~~ 164 (552)
...... . ...........+.+++.+||..+|.+||++.++.+.+..
T Consensus 214 ----~~~~~~-~--~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 214 ----EQVERG-Y--RMPCPQGCPESLHELMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred ----HHHHcC-C--CCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 000000 0 000111233458999999999999999999988887653
No 383
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=99.25 E-value=1.8e-12 Score=129.12 Aligned_cols=89 Identities=12% Similarity=0.076 Sum_probs=58.1
Q ss_pred hccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhhhhhhccccCCCchhhhh
Q 008820 34 DFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDYIRCVSTKASDDNIACL 112 (552)
Q Consensus 34 ~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~~~~~~~~~~~~~~~~~~ 112 (552)
..+|||.|||||++ ....++.++|||||||+||||++|+ ||...+.....
T Consensus 198 ~~~gt~~y~aPE~~---------------~~~~~~~~~DiwSlG~il~el~~G~~Pf~~~~~~~~~-------------- 248 (364)
T cd05599 198 STVGTPDYIAPEVF---------------LQTGYNKECDWWSLGVIMYEMLVGYPPFCSDNPQETY-------------- 248 (364)
T ss_pred ccccCccccCHHHH---------------cCCCCCCeeeeecchhHHHHhhcCCCCCCCCCHHHHH--------------
Confidence 46799999999998 2355678999999999999999999 99764432110
Q ss_pred hhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcch
Q 008820 113 GMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLL 155 (552)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~ 155 (552)
............+.......++.+++.+||. +|.+|++.
T Consensus 249 ---~~i~~~~~~~~~~~~~~~s~~~~~li~~ll~-~p~~R~~~ 287 (364)
T cd05599 249 ---RKIINWKETLQFPDEVPLSPEAKDLIKRLCC-EAERRLGN 287 (364)
T ss_pred ---HHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-CHhhcCCC
Confidence 0000000000000011123458899999996 99999983
No 384
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=99.25 E-value=4.5e-12 Score=119.76 Aligned_cols=94 Identities=17% Similarity=0.376 Sum_probs=63.9
Q ss_pred hhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC--CchHHHhhhhhhccccCCCchhh
Q 008820 33 SDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE--QFTKELIDYIRCVSTKASDDNIA 110 (552)
Q Consensus 33 ~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~--pf~~~~~~~~~~~~~~~~~~~~~ 110 (552)
..+.||+.|||||++ .+ ...++.++|||||||++|||++|. ||........
T Consensus 162 ~~~~~~~~y~aPE~~------~~--------~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~------------- 214 (258)
T cd05078 162 EILLERIPWVPPECI------EN--------PQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKK------------- 214 (258)
T ss_pred hhccccCCccCchhc------cC--------CCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHH-------------
Confidence 346899999999998 21 123568999999999999999995 6544222100
Q ss_pred hhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHH
Q 008820 111 CLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCI 162 (552)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l 162 (552)
........ ........++.+++.+||+.+|++||++.++.+.+
T Consensus 215 -----~~~~~~~~----~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l 257 (258)
T cd05078 215 -----LQFYEDRH----QLPAPKWTELANLINQCMDYEPDFRPSFRAIIRDL 257 (258)
T ss_pred -----HHHHHccc----cCCCCCcHHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence 00111111 11112334589999999999999999999887754
No 385
>KOG2139 consensus WD40 repeat protein [General function prediction only]
Probab=99.25 E-value=1.1e-08 Score=93.52 Aligned_cols=276 Identities=16% Similarity=0.154 Sum_probs=167.0
Q ss_pred ceEEEEEc--CCEEEEEeCCCcEEEEeCCCCeEEEEEeC-CCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCcc
Q 008820 254 CVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKG-HDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEP 330 (552)
Q Consensus 254 ~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~~~~~~~~~-h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~ 330 (552)
.+..++|+ -..++++..|-+|++||-+. ++...++. ....|++++|-|.+...++.|+. +.|.+|..+.......
T Consensus 100 dlr~~aWhqH~~~fava~nddvVriy~kss-t~pt~Lks~sQrnvtclawRPlsaselavgCr-~gIciW~~s~tln~~r 177 (445)
T KOG2139|consen 100 DLRGVAWHQHIIAFAVATNDDVVRIYDKSS-TCPTKLKSVSQRNVTCLAWRPLSASELAVGCR-AGICIWSDSRTLNANR 177 (445)
T ss_pred ceeeEeechhhhhhhhhccCcEEEEeccCC-CCCceecchhhcceeEEEeccCCcceeeeeec-ceeEEEEcCccccccc
Confidence 45667777 45578888999999999666 55555543 45789999999999888888876 5689998764322111
Q ss_pred ---------ccccccCCCceeeeEEEEeeCCCEEEEeeC-CCcEEEEECCCCceeEEecCCCCCeEEEEEe--CCEEEEE
Q 008820 331 ---------LKKWNEEKDWRYSGIHALTTSGRYLYTGSG-DRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC--NGVLYSG 398 (552)
Q Consensus 331 ---------~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~-dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~ 398 (552)
.+.+. +.+........+.+||..+++++. |..|.+||..++..+.......+.++-+.|+ +++|+++
T Consensus 178 ~~~~~s~~~~qvl~-~pgh~pVtsmqwn~dgt~l~tAS~gsssi~iWdpdtg~~~pL~~~glgg~slLkwSPdgd~lfaA 256 (445)
T KOG2139|consen 178 NIRMMSTHHLQVLQ-DPGHNPVTSMQWNEDGTILVTASFGSSSIMIWDPDTGQKIPLIPKGLGGFSLLKWSPDGDVLFAA 256 (445)
T ss_pred ccccccccchhhee-CCCCceeeEEEEcCCCCEEeecccCcceEEEEcCCCCCcccccccCCCceeeEEEcCCCCEEEEe
Confidence 11111 111133344567778888888775 6789999999988776554456678899999 3499999
Q ss_pred eCCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEECCCcEEEEeCC---c--------------ceeee-
Q 008820 399 SRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRND---K--------------FMKSM- 460 (552)
Q Consensus 399 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~---~--------------~~~~~- 460 (552)
.-|+..++|+............. .+.+.+ .+|+|+|++|+..+. |.-++|.+. + ++..+
T Consensus 257 t~davfrlw~e~q~wt~erw~lg-sgrvqt-acWspcGsfLLf~~s-gsp~lysl~f~~~~~~~~~~~~~k~~lliaDL~ 333 (445)
T KOG2139|consen 257 TCDAVFRLWQENQSWTKERWILG-SGRVQT-ACWSPCGSFLLFACS-GSPRLYSLTFDGEDSVFLRPQSIKRVLLIADLQ 333 (445)
T ss_pred cccceeeeehhcccceecceecc-CCceee-eeecCCCCEEEEEEc-CCceEEEEeecCCCccccCcccceeeeeeccch
Confidence 99999999965443322222222 234444 589999987765543 233444311 0 00000
Q ss_pred -----ec---ccceEEEEEe--cCCEEEEEeCCCe--------EEEEecCCCeeeeeeccCCCcccCcceEEEEEe----
Q 008820 461 -----QT---HKGSVFAVFL--EGKWLFTGGWDKT--------VSVQELAGDEFEEDVIPTGAIPCGSVITALLYW---- 518 (552)
Q Consensus 461 -----~~---h~~~v~~v~~--~~~~l~sgs~dg~--------i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~---- 518 (552)
.+ -.+...+++| .|.+|++.-..+. |.+||.+....... ...+...... -..++|+
T Consensus 334 e~ti~ag~~l~cgeaq~lawDpsGeyLav~fKg~~~v~~~k~~i~~fdtr~sp~vel-s~cg~i~ge~-P~~IsF~pl~n 411 (445)
T KOG2139|consen 334 EVTICAGQRLCCGEAQCLAWDPSGEYLAVIFKGQSFVLLCKLHISRFDTRKSPPVEL-SYCGMIGGEY-PAYISFGPLKN 411 (445)
T ss_pred hhhhhcCcccccCccceeeECCCCCEEEEEEcCCchhhhhhhhhhhhcccccCceEE-EecccccCCC-CceEEeeeccc
Confidence 01 1234455655 7889988765443 56677764322221 1111111111 2233444
Q ss_pred CCe-EEEEeCCCeEEEEEec
Q 008820 519 QGK-LFVGCADRTVKIALCN 537 (552)
Q Consensus 519 ~~~-l~s~s~Dg~v~iw~~~ 537 (552)
.+. |..+=+.|.+.-|.+.
T Consensus 412 ~g~lLsiaWsTGriq~ypl~ 431 (445)
T KOG2139|consen 412 EGRLLSIAWSTGRIQRYPLT 431 (445)
T ss_pred CCcEEEEEeccCceEeeeeE
Confidence 233 4445567888777765
No 386
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=99.24 E-value=5.4e-12 Score=120.98 Aligned_cols=130 Identities=16% Similarity=0.160 Sum_probs=72.7
Q ss_pred hhhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cc
Q 008820 13 VAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QF 89 (552)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf 89 (552)
.+|++ |+++.+..... .....||+.|+|||++. + ....+.++|||||||+||||++|. ||
T Consensus 137 ~~kl~dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~------~--------~~~~~~~~Di~slGv~l~el~~~~~p~ 199 (282)
T cd07831 137 ILKLADFGSCRGIYSKPP---YTEYISTRWYRAPECLL------T--------DGYYGPKMDIWAVGCVFFEILSLFPLF 199 (282)
T ss_pred CeEEEecccccccccCCC---cCCCCCCcccCChhHhh------c--------CCCCCcchhHHHHHHHHHHHHcCCcCC
Confidence 45555 45555543322 34567999999999872 1 234568999999999999999999 99
Q ss_pred hHHHhhhh----hhccccCCCchhhhhhhhH---H--HHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 90 TKELIDYI----RCVSTKASDDNIACLGMYM---A--WMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 90 ~~~~~~~~----~~~~~~~~~~~~~~~~~~~---~--~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
...+.... ...... .+..|....... . ..................++.+++.+||+.+|++||++.++.+
T Consensus 200 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~ 278 (282)
T cd07831 200 PGTNELDQIAKIHDVLGT-PDAEVLKKFRKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALR 278 (282)
T ss_pred CCCCHHHHHHHHHHHcCC-CCHHHHHhhcccccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhh
Confidence 65432211 100010 000000000000 0 0000000000011123456999999999999999999887654
No 387
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=99.24 E-value=3.9e-12 Score=121.76 Aligned_cols=114 Identities=17% Similarity=0.317 Sum_probs=71.6
Q ss_pred hhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cch
Q 008820 14 AKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFT 90 (552)
Q Consensus 14 ~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~ 90 (552)
.|+. |++..+... ..+...||+.|+|||++ . ...++.++|+|||||++|+|++|+ ||.
T Consensus 134 ~~l~dfg~~~~~~~~----~~~~~~~~~~y~aPE~~------~---------~~~~~~~~DvwslG~~l~~l~~g~~pf~ 194 (279)
T cd06619 134 VKLCDFGVSTQLVNS----IAKTYVGTNAYMAPERI------S---------GEQYGIHSDVWSLGISFMELALGRFPYP 194 (279)
T ss_pred EEEeeCCcceecccc----cccCCCCChhhcCceee------c---------CCCCCCcchHHHHHHHHHHHHhCCCCch
Confidence 4455 445444333 24567899999999998 2 245678999999999999999999 996
Q ss_pred HHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHH-Hhh-hhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 91 KELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYL-LEN-KFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
..... ..... ........... +.. ......+++.+++.+||+.+|.+||++.++.+
T Consensus 195 ~~~~~-----~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~ 252 (279)
T cd06619 195 QIQKN-----QGSLM---------PLQLLQCIVDEDPPVLPVGQFSEKFVHFITQCMRKQPKERPAPENLMD 252 (279)
T ss_pred hhccc-----ccccc---------hHHHHHHHhccCCCCCCCCcCCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence 53221 00000 00111100000 000 01123446899999999999999999887655
No 388
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=99.24 E-value=1.8e-12 Score=124.76 Aligned_cols=99 Identities=18% Similarity=0.212 Sum_probs=64.3
Q ss_pred hhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHh--hhhhhccccCCCchh
Q 008820 33 SDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELI--DYIRCVSTKASDDNI 109 (552)
Q Consensus 33 ~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~--~~~~~~~~~~~~~~~ 109 (552)
....||+.|+|||++ .+ .....++.++|||||||++|||++|+ ||..... ..+..+....
T Consensus 165 ~~~~~~~~y~aPE~~------~~------~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~----- 227 (288)
T cd06616 165 TRDAGCRPYMAPERI------DP------SARDGYDVRSDVWSLGITLYEVATGKFPYPKWNSVFDQLTQVVKGD----- 227 (288)
T ss_pred ccccCccCccCHHHh------cc------ccccCCcchhhhhHHHHHHHHHHhCCCCchhcchHHHHHhhhcCCC-----
Confidence 445799999999998 22 00135678999999999999999999 9965321 1111000000
Q ss_pred hhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 110 ACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
.+..+.........++.+++.+||+.+|++||+..++..
T Consensus 228 ------------~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~ 266 (288)
T cd06616 228 ------------PPILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLE 266 (288)
T ss_pred ------------CCcCCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 000011111123345889999999999999999887655
No 389
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=99.24 E-value=4e-12 Score=125.54 Aligned_cols=128 Identities=15% Similarity=0.216 Sum_probs=71.8
Q ss_pred hhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cch
Q 008820 14 AKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFT 90 (552)
Q Consensus 14 ~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~ 90 (552)
.|+. |+++..... .....||+.|||||++ .+ ...++.++|||||||+||+|++|+ ||.
T Consensus 157 ~kl~Dfg~~~~~~~~-----~~~~~~t~~y~aPE~~------~~--------~~~~~~~~DiwslG~il~el~~g~~pf~ 217 (343)
T cd07878 157 LRILDFGLARQADDE-----MTGYVATRWYRAPEIM------LN--------WMHYNQTVDIWSVGCIMAELLKGKALFP 217 (343)
T ss_pred EEEcCCccceecCCC-----cCCccccccccCchHh------cC--------CccCCchhhhHhHHHHHHHHHHCCCCCC
Confidence 3444 455554433 4567899999999998 22 134668999999999999999999 996
Q ss_pred HHHhh----hhhhccccCCCchhh-hh-hhhHHHHHHHHHHH----hhhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 91 KELID----YIRCVSTKASDDNIA-CL-GMYMAWMEKVTYLL----ENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 91 ~~~~~----~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~----~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
..... .+....+...+..+. .. ..........+..+ ........+.+.+++.+||..+|.+||++.++..
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~ 297 (343)
T cd07878 218 GNDYIDQLKRIMEVVGTPSPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALA 297 (343)
T ss_pred CCCHHHHHHHHHHHhCCCCHHHHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 53221 111000110000000 00 00000000000000 0011122334789999999999999999887665
No 390
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=99.24 E-value=2.1e-12 Score=129.40 Aligned_cols=46 Identities=26% Similarity=0.491 Sum_probs=39.3
Q ss_pred hhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHH
Q 008820 33 SDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKEL 93 (552)
Q Consensus 33 ~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~ 93 (552)
..+.||+.|||||++ . ...++.++|||||||+||||++|+ ||...+
T Consensus 206 ~~~~gt~~Y~aPE~~------~---------~~~~~~~~DiwSlGvil~elltG~~Pf~~~~ 252 (382)
T cd05625 206 HSLVGTPNYIAPEVL------L---------RTGYTQLCDWWSVGVILYEMLVGQPPFLAQT 252 (382)
T ss_pred cccccCcccCCHHHh------c---------CCCCCCeeeEEechHHHHHHHhCCCCCCCCC
Confidence 457899999999999 2 245678999999999999999999 996543
No 391
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=99.24 E-value=6e-12 Score=119.16 Aligned_cols=110 Identities=15% Similarity=0.122 Sum_probs=71.9
Q ss_pred cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhh-CC-CchHHHhh
Q 008820 18 CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE-QFTKELID 95 (552)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~llt-g~-pf~~~~~~ 95 (552)
|++..+.+.... .....+++.|+|||++ ....++.++|||||||++|+|++ |+ ||......
T Consensus 149 g~~~~~~~~~~~--~~~~~~~~~~~~PE~~---------------~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~ 211 (261)
T cd05148 149 GLARLIKEDVYL--SSDKKIPYKWTAPEAA---------------SHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNH 211 (261)
T ss_pred cchhhcCCcccc--ccCCCCceEecCHHHH---------------ccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHH
Confidence 445444433221 3355678899999998 22456689999999999999999 88 99654322
Q ss_pred hhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHHh
Q 008820 96 YIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRE 164 (552)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~~ 164 (552)
.+. ..... ....+.......++.+++.+|++.+|.+||++.++.+.+..
T Consensus 212 ~~~-----------------~~~~~---~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~ 260 (261)
T cd05148 212 EVY-----------------DQITA---GYRMPCPAKCPQEIYKIMLECWAAEPEDRPSFKALREELDN 260 (261)
T ss_pred HHH-----------------HHHHh---CCcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhc
Confidence 110 00000 00001112234458899999999999999999998887653
No 392
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=99.24 E-value=5.5e-12 Score=119.77 Aligned_cols=95 Identities=15% Similarity=0.154 Sum_probs=66.0
Q ss_pred ccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhh-CC-CchHHHhhhhhhccccCCCchhhhh
Q 008820 35 FLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE-QFTKELIDYIRCVSTKASDDNIACL 112 (552)
Q Consensus 35 ~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~llt-g~-pf~~~~~~~~~~~~~~~~~~~~~~~ 112 (552)
..+++.|||||++ . ...+++++|||||||++|+|++ |+ ||.......+.
T Consensus 168 ~~~~~~y~~Pe~~------~---------~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~~-------------- 218 (266)
T cd05033 168 GKIPIRWTAPEAI------A---------YRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVI-------------- 218 (266)
T ss_pred CCCCccccChhhh------c---------cCCCccccchHHHHHHHHHHHccCCCCCCCCCHHHHH--------------
Confidence 3457889999998 2 2456789999999999999998 99 99543322110
Q ss_pred hhhHHHHHHHHHH-HhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHHhh
Q 008820 113 GMYMAWMEKVTYL-LENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIREL 165 (552)
Q Consensus 113 ~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~~~ 165 (552)
..+... ..+.....+..+.+++.+|++.+|++||++.++.+.+.++
T Consensus 219 -------~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 219 -------KAVEDGYRLPPPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred -------HHHHcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 000000 0001112344589999999999999999999998887764
No 393
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=99.24 E-value=2.8e-12 Score=114.56 Aligned_cols=117 Identities=15% Similarity=0.186 Sum_probs=78.5
Q ss_pred hhhhhhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC
Q 008820 10 TKSVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE 87 (552)
Q Consensus 10 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~ 87 (552)
|+-+||.. |+|..+.+--.- .-.+.|||-|||||+++|.. ++.++||||||++..||.-|+
T Consensus 164 T~G~AKLADFGVAGQLTDTMAK--RNTVIGTPFWMAPEVI~EIG---------------Y~~~ADIWSLGITaIEMAEG~ 226 (502)
T KOG0574|consen 164 TDGIAKLADFGVAGQLTDTMAK--RNTVIGTPFWMAPEVIEEIG---------------YDTKADIWSLGITAIEMAEGR 226 (502)
T ss_pred ccchhhhhhccccchhhhhHHh--hCccccCcccccHHHHHHhc---------------cchhhhHhhhcchhhhhhcCC
Confidence 55667766 677666654332 55789999999999996643 347999999999999999999
Q ss_pred -CchHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHH
Q 008820 88 -QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKC 161 (552)
Q Consensus 88 -pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~ 161 (552)
|+..-...+-++ ++.-.| +...+ .+..+..++.+++++||-+.|++|-++.++.+.
T Consensus 227 PPYsDIHPMRAIF-MIPT~P--------PPTF~---------KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H 283 (502)
T KOG0574|consen 227 PPYSDIHPMRAIF-MIPTKP--------PPTFK---------KPEEWSSEFNDFIRSCLIKKPEERKTALRLCEH 283 (502)
T ss_pred CCcccccccceeE-eccCCC--------CCCCC---------ChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhh
Confidence 886544332221 111111 00000 011133458899999999999999887766653
No 394
>PRK04922 tolB translocation protein TolB; Provisional
Probab=99.23 E-value=2.2e-09 Score=108.96 Aligned_cols=212 Identities=15% Similarity=0.164 Sum_probs=131.7
Q ss_pred CcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCCEEEEEcC--CCcEEEEeCCCCCCCccccccccCCCceeeeEEEEe
Q 008820 272 KSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDS--GGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALT 349 (552)
Q Consensus 272 g~I~iwd~~~~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~--dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (552)
..|.+||... ...+.+..+...+.+.+|+|++..++++... +..|.+||+.++... .+...... .....++
T Consensus 184 ~~l~i~D~~g-~~~~~lt~~~~~v~~p~wSpDg~~la~~s~~~~~~~l~~~dl~~g~~~-~l~~~~g~-----~~~~~~S 256 (433)
T PRK04922 184 YALQVADSDG-YNPQTILRSAEPILSPAWSPDGKKLAYVSFERGRSAIYVQDLATGQRE-LVASFRGI-----NGAPSFS 256 (433)
T ss_pred EEEEEECCCC-CCceEeecCCCccccccCCCCCCEEEEEecCCCCcEEEEEECCCCCEE-EeccCCCC-----ccCceEC
Confidence 4689999854 4455566677889999999988866554433 346999999765432 22211111 1234789
Q ss_pred eCCCEEE-EeeCCC--cEEEEECCCCceeEEecCCCCCeEEEEEe-CC-EEEEEe-CCCc--EEEEECCCCceeEEEecC
Q 008820 350 TSGRYLY-TGSGDR--TIKAWSLLDGTLSCTMSGHKSAVSTLAVC-NG-VLYSGS-RDGT--IRLWSLSDHSLLTVLEED 421 (552)
Q Consensus 350 ~~~~~l~-sgs~dg--~i~iwd~~~~~~~~~~~~h~~~v~~l~~~-~~-~l~s~~-~dg~--i~iwd~~~~~~~~~~~~~ 421 (552)
|+|+.++ +.+.+| .|++||+.+++.. .+..+.......+|+ ++ .++.++ .+|. |+++|+.+++.... ...
T Consensus 257 pDG~~l~~~~s~~g~~~Iy~~d~~~g~~~-~lt~~~~~~~~~~~spDG~~l~f~sd~~g~~~iy~~dl~~g~~~~l-t~~ 334 (433)
T PRK04922 257 PDGRRLALTLSRDGNPEIYVMDLGSRQLT-RLTNHFGIDTEPTWAPDGKSIYFTSDRGGRPQIYRVAASGGSAERL-TFQ 334 (433)
T ss_pred CCCCEEEEEEeCCCCceEEEEECCCCCeE-ECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCeEEe-ecC
Confidence 9998664 455555 5999999887754 455555556678898 44 666555 4444 77777777664332 222
Q ss_pred CCCceEEEEEEcCCCCEEEEEECCC---cEEEEeCCc-ceeeeecc-cceEEEEEecCCEEEEEeCC---CeEEEEecCC
Q 008820 422 SSGAVSSVLSLTAVQHTLVVSHESG---SIKVWRNDK-FMKSMQTH-KGSVFAVFLEGKWLFTGGWD---KTVSVQELAG 493 (552)
Q Consensus 422 ~~~~~~~~~~~s~~~~~l~~g~~dg---~i~iwd~~~-~~~~~~~h-~~~v~~v~~~~~~l~sgs~d---g~i~iwd~~~ 493 (552)
. . .....+|+|+|+.++..+.++ .|.+||+.. ....+... ...-.++++||++++..+.+ +.|.++++.+
T Consensus 335 g-~-~~~~~~~SpDG~~Ia~~~~~~~~~~I~v~d~~~g~~~~Lt~~~~~~~p~~spdG~~i~~~s~~~g~~~L~~~~~~g 412 (433)
T PRK04922 335 G-N-YNARASVSPDGKKIAMVHGSGGQYRIAVMDLSTGSVRTLTPGSLDESPSFAPNGSMVLYATREGGRGVLAAVSTDG 412 (433)
T ss_pred C-C-CccCEEECCCCCEEEEEECCCCceeEEEEECCCCCeEECCCCCCCCCceECCCCCEEEEEEecCCceEEEEEECCC
Confidence 1 1 122268999999998765443 588999643 22333221 11112455699988877653 4578888865
Q ss_pred C
Q 008820 494 D 494 (552)
Q Consensus 494 ~ 494 (552)
.
T Consensus 413 ~ 413 (433)
T PRK04922 413 R 413 (433)
T ss_pred C
Confidence 4
No 395
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=99.23 E-value=3.2e-12 Score=121.14 Aligned_cols=94 Identities=15% Similarity=0.198 Sum_probs=63.6
Q ss_pred hhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhhhhhhccccCCCchhhh
Q 008820 33 SDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDYIRCVSTKASDDNIAC 111 (552)
Q Consensus 33 ~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~~~~~~~~~~~~~~~~~ 111 (552)
....|++.|+|||++ .+ ...+.++|||||||++|||++|+ ||.........
T Consensus 165 ~~~~~~~~y~aPE~~------~~---------~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~------------- 216 (263)
T cd06625 165 KSVTGTPYWMSPEVI------SG---------EGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAI------------- 216 (263)
T ss_pred cCCCcCccccCccee------cc---------CCCCchhhhHHHHHHHHHHHhCCCCccccchHHHH-------------
Confidence 456799999999998 22 34678999999999999999999 99653222000
Q ss_pred hhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 112 LGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
.... . ..............+.+++.+||.++|.+||+..++..
T Consensus 217 ---~~~~-~--~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 259 (263)
T cd06625 217 ---FKIA-T--QPTNPQLPSHVSPDARNFLRRTFVENAKKRPSAEELLR 259 (263)
T ss_pred ---HHHh-c--cCCCCCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhh
Confidence 0000 0 00000111123445889999999999999999877654
No 396
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=99.23 E-value=6.8e-12 Score=118.75 Aligned_cols=109 Identities=17% Similarity=0.174 Sum_probs=72.1
Q ss_pred cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhh-CC-CchHHHhh
Q 008820 18 CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE-QFTKELID 95 (552)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~llt-g~-pf~~~~~~ 95 (552)
|++..+...+.........+++.|+|||++ . ....+.++|||||||++|||++ |+ ||......
T Consensus 150 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~------~---------~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~ 214 (262)
T cd00192 150 GLSRDVYDDDYYRKKTGGKLPIRWMAPESL------K---------DGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNE 214 (262)
T ss_pred ccccccccccccccccCCCcCccccCHHHh------c---------cCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHH
Confidence 444444443322234567789999999998 2 2456789999999999999999 58 99664332
Q ss_pred hhhhccccCCCchhhhhhhhHHHHHHHHHH-HhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHH
Q 008820 96 YIRCVSTKASDDNIACLGMYMAWMEKVTYL-LENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCI 162 (552)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l 162 (552)
.+. ...... ...........+.+++.+||..+|.+||++.++.+.+
T Consensus 215 ~~~---------------------~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l 261 (262)
T cd00192 215 EVL---------------------EYLRKGYRLPKPEYCPDELYELMLSCWQLDPEDRPTFSELVERL 261 (262)
T ss_pred HHH---------------------HHHHcCCCCCCCccCChHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence 110 111000 0011112244589999999999999999999887754
No 397
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=99.23 E-value=3.5e-12 Score=127.70 Aligned_cols=96 Identities=15% Similarity=0.098 Sum_probs=60.0
Q ss_pred hhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhhhhhhccccCCCchhhh
Q 008820 33 SDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDYIRCVSTKASDDNIAC 111 (552)
Q Consensus 33 ~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~~~~~~~~~~~~~~~~~ 111 (552)
..++||+.|||||++ . ...++.++|||||||+||||+||+ ||...+.....
T Consensus 206 ~~~~gt~~Y~aPE~~------~---------~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~------------- 257 (381)
T cd05626 206 HSLVGTPNYIAPEVL------L---------RKGYTQLCDWWSVGVILFEMLVGQPPFLAPTPTETQ------------- 257 (381)
T ss_pred ccccCCccccCHHHH------c---------CCCCCCccceeehhhHHHHHHhCCCCCcCCCHHHHH-------------
Confidence 457899999999999 2 245678999999999999999999 99654322100
Q ss_pred hhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcc--cCCCCCcchhhHHH
Q 008820 112 LGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLN--FDPGCRPLLTNVWK 160 (552)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~--~~p~~R~~~~~~~~ 160 (552)
............+......+++.+++.+++. .+|..|++..++..
T Consensus 258 ----~~i~~~~~~~~~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~ 304 (381)
T cd05626 258 ----LKVINWENTLHIPPQVKLSPEAVDLITKLCCSAEERLGRNGADDIKA 304 (381)
T ss_pred ----HHHHccccccCCCCCCCCCHHHHHHHHHHccCcccccCCCCHHHHhc
Confidence 0000000000001111234458889988554 45555888777655
No 398
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=99.23 E-value=5.6e-12 Score=119.69 Aligned_cols=96 Identities=15% Similarity=0.210 Sum_probs=65.7
Q ss_pred ccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhh-CC-CchHHHhhhhhhccccCCCchhhhh
Q 008820 35 FLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE-QFTKELIDYIRCVSTKASDDNIACL 112 (552)
Q Consensus 35 ~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~llt-g~-pf~~~~~~~~~~~~~~~~~~~~~~~ 112 (552)
..+++.|||||++ . ...+++++|||||||++|||++ |+ ||.......+.
T Consensus 168 ~~~~~~y~aPE~~------~---------~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~~~-------------- 218 (266)
T cd05064 168 GKSPVLWAAPEAI------Q---------YHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDVI-------------- 218 (266)
T ss_pred CCCceeecCHHHH------h---------hCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHH--------------
Confidence 4567899999998 2 2566789999999999999775 99 99653322111
Q ss_pred hhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHHhh
Q 008820 113 GMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIREL 165 (552)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~~~ 165 (552)
...... . ..+.....+..+.+++.+|++.+|.+||++.++.+.+.++
T Consensus 219 ---~~~~~~-~--~~~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 219 ---KAVEDG-F--RLPAPRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSKM 265 (266)
T ss_pred ---HHHHCC-C--CCCCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence 000000 0 0001112334588999999999999999999998877654
No 399
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=99.23 E-value=4.6e-12 Score=134.78 Aligned_cols=100 Identities=14% Similarity=0.228 Sum_probs=67.3
Q ss_pred hhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhhhhhhccccCCCchhhh
Q 008820 33 SDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDYIRCVSTKASDDNIAC 111 (552)
Q Consensus 33 ~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~~~~~~~~~~~~~~~~~ 111 (552)
..+.||+.|||||++ .| ..++.++|||||||+||||+||+ ||.......+.
T Consensus 189 g~~vGT~~YmAPE~l------~g---------~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~ki~------------- 240 (932)
T PRK13184 189 GKIVGTPDYMAPERL------LG---------VPASESTDIYALGVILYQMLTLSFPYRRKKGRKIS------------- 240 (932)
T ss_pred CCCCCCCCCCCHHHh------cC---------CCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhhhh-------------
Confidence 346899999999998 32 45678999999999999999999 99663322110
Q ss_pred hhhhHHHHHHHHHHH-hhhhcCccccHHHHHHhhcccCCCCCcc-hhhHHHHHHhhh
Q 008820 112 LGMYMAWMEKVTYLL-ENKFGSEFVSLQLMFCQCLNFDPGCRPL-LTNVWKCIRELI 166 (552)
Q Consensus 112 ~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~l~~~p~~R~~-~~~~~~~l~~~~ 166 (552)
......... ..........+.+++.+||+.+|.+||+ +.++.+.+...+
T Consensus 241 ------~~~~i~~P~~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~l 291 (932)
T PRK13184 241 ------YRDVILSPIEVAPYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHL 291 (932)
T ss_pred ------hhhhccChhhccccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 000000000 0011123345889999999999999977 556666666554
No 400
>PHA03211 serine/threonine kinase US3; Provisional
Probab=99.23 E-value=6.6e-12 Score=127.26 Aligned_cols=61 Identities=15% Similarity=0.163 Sum_probs=45.2
Q ss_pred hhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cc
Q 008820 14 AKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QF 89 (552)
Q Consensus 14 ~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf 89 (552)
+|+. |+++.+...........+.||+.|||||++ .| ..++.++|||||||+||||++|. |+
T Consensus 299 vkL~DFGla~~~~~~~~~~~~~~~~GT~~Y~APE~~------~~---------~~~~~~sDvwSlGviL~El~~g~~~l 362 (461)
T PHA03211 299 ICLGDFGAACFARGSWSTPFHYGIAGTVDTNAPEVL------AG---------DPYTPSVDIWSAGLVIFEAAVHTASL 362 (461)
T ss_pred EEEcccCCceecccccccccccccCCCcCCcCHHHH------cC---------CCCCchHHHHHHHHHHHHHHHcCCCc
Confidence 4555 556555443333334567899999999999 33 55778999999999999999988 55
No 401
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=99.23 E-value=6.9e-12 Score=118.67 Aligned_cols=96 Identities=14% Similarity=0.131 Sum_probs=66.5
Q ss_pred hhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhh-CC-CchHHHhhhhhhccccCCCchhh
Q 008820 33 SDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE-QFTKELIDYIRCVSTKASDDNIA 110 (552)
Q Consensus 33 ~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~llt-g~-pf~~~~~~~~~~~~~~~~~~~~~ 110 (552)
....+++.|+|||++ . ...++.++|||||||++|||++ |+ ||...+...+.
T Consensus 161 ~~~~~~~~y~~pe~~------~---------~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~------------ 213 (260)
T cd05067 161 EGAKFPIKWTAPEAI------N---------YGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVI------------ 213 (260)
T ss_pred cCCcccccccCHHHh------c---------cCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHHHH------------
Confidence 345678899999998 2 2456789999999999999999 99 99654433110
Q ss_pred hhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHH
Q 008820 111 CLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIR 163 (552)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~ 163 (552)
..... .. ..+.......++.+++.+|+..+|++||+..++...+.
T Consensus 214 -----~~~~~-~~--~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 258 (260)
T cd05067 214 -----QNLER-GY--RMPRPDNCPEELYELMRLCWKEKPEERPTFEYLRSVLE 258 (260)
T ss_pred -----HHHHc-CC--CCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHhh
Confidence 00000 00 00011112345999999999999999999998887765
No 402
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=99.23 E-value=3.4e-12 Score=126.87 Aligned_cols=69 Identities=20% Similarity=0.318 Sum_probs=48.2
Q ss_pred hhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cch
Q 008820 14 AKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFT 90 (552)
Q Consensus 14 ~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~ 90 (552)
+|+. |+|+.+...... -.....||+.|||||++.... ..+.++.++|+|||||+||||++|+ ||.
T Consensus 181 ~kL~DFG~a~~~~~~~~~-~~~~~~gt~~Y~aPE~~~~~~-----------~~~~~~~~~DiwSlG~ilyell~G~~Pf~ 248 (370)
T cd05621 181 LKLADFGTCMKMDETGMV-RCDTAVGTPDYISPEVLKSQG-----------GDGYYGRECDWWSVGVFLFEMLVGDTPFY 248 (370)
T ss_pred EEEEecccceecccCCce-ecccCCCCcccCCHHHHhccC-----------CCCCCCcccCEEeehHHHHHHHhCCCCCC
Confidence 5555 566655433211 134678999999999993110 1234678999999999999999999 997
Q ss_pred HHHh
Q 008820 91 KELI 94 (552)
Q Consensus 91 ~~~~ 94 (552)
..+.
T Consensus 249 ~~~~ 252 (370)
T cd05621 249 ADSL 252 (370)
T ss_pred CCCH
Confidence 6543
No 403
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=99.23 E-value=2.7e-12 Score=127.57 Aligned_cols=92 Identities=16% Similarity=0.124 Sum_probs=59.7
Q ss_pred hccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhhhhhhccccCCCchhhhh
Q 008820 34 DFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDYIRCVSTKASDDNIACL 112 (552)
Q Consensus 34 ~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~~~~~~~~~~~~~~~~~~ 112 (552)
..+||+.|||||++ . ...++.++|||||||+||||+||+ ||...+...+.
T Consensus 195 ~~~gt~~Y~APE~~------~---------~~~~~~~~DiwSlGvilyel~tG~~Pf~~~~~~~~~-------------- 245 (360)
T cd05627 195 STVGTPDYIAPEVF------M---------QTGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETY-------------- 245 (360)
T ss_pred ccCCCccccCHHHH------c---------CCCCCCcceeccccceeeecccCCCCCCCCCHHHHH--------------
Confidence 56899999999998 2 245678999999999999999999 99664433110
Q ss_pred hhhHHHHH--HHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 113 GMYMAWME--KVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 113 ~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
..+.. .....+. ......++.+++.+++ .+|.+|+....+.+
T Consensus 246 ---~~i~~~~~~~~~p~--~~~~s~~~~~li~~l~-~~p~~R~~~~~~~e 289 (360)
T cd05627 246 ---RKVMNWKETLVFPP--EVPISEKAKDLILRFC-TDSENRIGSNGVEE 289 (360)
T ss_pred ---HHHHcCCCceecCC--CCCCCHHHHHHHHHhc-cChhhcCCCCCHHH
Confidence 00000 0000010 0112345888888876 59999987544333
No 404
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=99.23 E-value=6.2e-12 Score=119.68 Aligned_cols=112 Identities=19% Similarity=0.259 Sum_probs=74.2
Q ss_pred hhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cch
Q 008820 14 AKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFT 90 (552)
Q Consensus 14 ~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~ 90 (552)
+|+. |+++...... ......|++.|+|||++ . ...++.++|+|||||++|+|++|+ ||.
T Consensus 153 ~~l~dfg~~~~~~~~~---~~~~~~~~~~~~~Pe~~------~---------~~~~~~~~Dv~slG~ll~~l~~g~~p~~ 214 (269)
T cd08528 153 VTITDFGLAKQKQPES---KLTSVVGTILYSCPEIV------K---------NEPYGEKADVWAFGCILYQMCTLQPPFY 214 (269)
T ss_pred EEEecccceeeccccc---ccccccCcccCcChhhh------c---------CCCCchHHHHHHHHHHHHHHHhCCCccc
Confidence 4555 3444443332 24677899999999999 2 245678999999999999999999 996
Q ss_pred HHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHH
Q 008820 91 KELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCI 162 (552)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l 162 (552)
......+. ......... + .........+.+++.+|++.+|++||++.++...+
T Consensus 215 ~~~~~~~~-----------------~~~~~~~~~-~-~~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~ 267 (269)
T cd08528 215 STNMLSLA-----------------TKIVEAVYE-P-LPEGMYSEDVTDVITSCLTPDAEARPDIIQVSAMI 267 (269)
T ss_pred ccCHHHHH-----------------HHHhhccCC-c-CCcccCCHHHHHHHHHHCCCCCccCCCHHHHHHHh
Confidence 54333111 000000000 0 00012344699999999999999999999888765
No 405
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=99.23 E-value=4.8e-12 Score=120.78 Aligned_cols=101 Identities=15% Similarity=0.157 Sum_probs=63.8
Q ss_pred hhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhhhhhhccccCCCchhh
Q 008820 32 LSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDYIRCVSTKASDDNIA 110 (552)
Q Consensus 32 ~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~~~~~~~~~~~~~~~~ 110 (552)
.....||+.|||||++..... ....+++++|||||||+||+|++|+ ||.........
T Consensus 170 ~~~~~~~~~y~aPE~~~~~~~----------~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~------------ 227 (275)
T cd06608 170 RNTFIGTPYWMAPEVIACDEQ----------PDASYDARSDVWSLGITAIELADGKPPLCDMHPMRAL------------ 227 (275)
T ss_pred hcCccccccccCHhHhccccc----------ccCCccccccHHHhHHHHHHHHhCCCCccccchHHHH------------
Confidence 345679999999999832111 1234568999999999999999999 99643221000
Q ss_pred hhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 111 CLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
.+......+. ..........+.+++.+||..+|++||++.++..
T Consensus 228 ----~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~ 271 (275)
T cd06608 228 ----FKIPRNPPPT--LKSPENWSKKFNDFISECLIKNYEQRPFMEELLE 271 (275)
T ss_pred ----HHhhccCCCC--CCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 0000000000 0000012235889999999999999999887654
No 406
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=99.23 E-value=1e-11 Score=119.92 Aligned_cols=103 Identities=12% Similarity=0.093 Sum_probs=65.8
Q ss_pred hhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhh--CC-CchHHHhhhhhhccccCCCchh
Q 008820 33 SDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI--GE-QFTKELIDYIRCVSTKASDDNI 109 (552)
Q Consensus 33 ~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~llt--g~-pf~~~~~~~~~~~~~~~~~~~~ 109 (552)
....+++.|||||++ ....++.++|+|||||++|+|++ |. ||...+...+..
T Consensus 189 ~~~~~~~~y~aPE~~---------------~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~~~~~---------- 243 (295)
T cd05097 189 GRAVLPIRWMAWESI---------------LLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDEQVIE---------- 243 (295)
T ss_pred CcCcCceeecChhhh---------------ccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccChHHHHH----------
Confidence 445668899999998 23556789999999999999988 56 886533321110
Q ss_pred hhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHH
Q 008820 110 ACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIR 163 (552)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~ 163 (552)
...+.................+..+.+++.+|++.+|++||++.++.+.+.
T Consensus 244 ---~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~ 294 (295)
T cd05097 244 ---NTGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLR 294 (295)
T ss_pred ---HHHHhhhhccccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence 000000000000000111123346999999999999999999999877654
No 407
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=99.22 E-value=5.7e-12 Score=120.48 Aligned_cols=111 Identities=19% Similarity=0.315 Sum_probs=70.8
Q ss_pred hhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cch
Q 008820 14 AKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFT 90 (552)
Q Consensus 14 ~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~ 90 (552)
.|.+ |+++.+...... ...+.|++.|+|||++ .+ ..++.++|+|||||++|||+||+ ||.
T Consensus 140 ~~l~dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~------~~---------~~~~~~~Dv~slG~il~el~tg~~p~~ 202 (277)
T cd06642 140 VKLADFGVAGQLTDTQIK--RNTFVGTPFWMAPEVI------KQ---------SAYDFKADIWSLGITAIELAKGEPPNS 202 (277)
T ss_pred EEEccccccccccCcchh--hhcccCcccccCHHHh------Cc---------CCCchhhhHHHHHHHHHHHHhCCCCCc
Confidence 4444 444444433221 3346799999999998 22 44568999999999999999999 986
Q ss_pred HHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHH
Q 008820 91 KELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKC 161 (552)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~ 161 (552)
......+. ...... .+.........++.+++.+|++.+|++||++.++...
T Consensus 203 ~~~~~~~~-----------------~~~~~~---~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06642 203 DLHPMRVL-----------------FLIPKN---SPPTLEGQYSKPFKEFVEACLNKDPRFRPTAKELLKH 253 (277)
T ss_pred ccchhhHH-----------------hhhhcC---CCCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 43222110 000000 0000001123358899999999999999999887763
No 408
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=99.22 E-value=9.3e-12 Score=118.29 Aligned_cols=99 Identities=20% Similarity=0.412 Sum_probs=67.5
Q ss_pred hhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhhhhhhccccCCCchhhh
Q 008820 33 SDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDYIRCVSTKASDDNIAC 111 (552)
Q Consensus 33 ~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~~~~~~~~~~~~~~~~~ 111 (552)
....|++.|+|||++ . ...++.++|+|||||++|+|++|+ ||...... +.
T Consensus 164 ~~~~~~~~y~apE~~------~---------~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-~~------------- 214 (267)
T cd08224 164 HSLVGTPYYMSPERI------H---------ENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN-LY------------- 214 (267)
T ss_pred ceecCCccccCHHHh------c---------cCCCCchhcHHHHHHHHHHHHHCCCCcccCCcc-HH-------------
Confidence 456799999999998 2 244668999999999999999999 99653321 00
Q ss_pred hhhhHHHHHHHHHH--HhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHHhh
Q 008820 112 LGMYMAWMEKVTYL--LENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIREL 165 (552)
Q Consensus 112 ~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~~~ 165 (552)
...+..... +..........+.+++.+|+..+|++||+..++.+.+.++
T Consensus 215 -----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~ 265 (267)
T cd08224 215 -----SLCKKIEKCDYPPLPADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEM 265 (267)
T ss_pred -----HHHhhhhcCCCCCCChhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHh
Confidence 000000000 0000001223588999999999999999999988877654
No 409
>KOG1409 consensus Uncharacterized conserved protein, contains WD40 repeats and FYVE domains [Function unknown]
Probab=99.22 E-value=2.4e-09 Score=97.23 Aligned_cols=224 Identities=17% Similarity=0.218 Sum_probs=150.2
Q ss_pred ccccceeeecCcceEEEeeCCCeEEEEEee-----------cCccceEEEEEc--CCEEEEEeCCCcEEEEeCC----CC
Q 008820 220 ADIDQARAAGGVKDLVNGLSKGNVKFKDLQ-----------GHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLK----DF 282 (552)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-----------~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~----~~ 282 (552)
+.++.+...+....+++.+.+..+++|.-. .-..+++++.+. ...|+.|-..|++.-+.+. ..
T Consensus 25 d~vn~~~l~~~e~gv~~~s~drtvrv~lkrds~q~wpsI~~~mP~~~~~~~y~~e~~~L~vg~~ngtvtefs~sedfnkm 104 (404)
T KOG1409|consen 25 DDVNAAILIPKEEGVISVSEDRTVRVWLKRDSGQYWPSIYHYMPSPCSAMEYVSESRRLYVGQDNGTVTEFALSEDFNKM 104 (404)
T ss_pred hhhhhheeccCCCCeEEccccceeeeEEeccccccCchhhhhCCCCceEeeeeccceEEEEEEecceEEEEEhhhhhhhc
Confidence 345555556667778888888888887532 224578888888 7788889899999888653 44
Q ss_pred eEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCC
Q 008820 283 SHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDR 362 (552)
Q Consensus 283 ~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg 362 (552)
...+....|...|..+.|+-..+ .+++.+.|..+.---.+.+.......... ...+...+-.+.+.|...|
T Consensus 105 ~~~r~~~~h~~~v~~~if~~~~e-~V~s~~~dk~~~~hc~e~~~~lg~Y~~~~--------~~t~~~~d~~~~fvGd~~g 175 (404)
T KOG1409|consen 105 TFLKDYLAHQARVSAIVFSLTHE-WVLSTGKDKQFAWHCTESGNRLGGYNFET--------PASALQFDALYAFVGDHSG 175 (404)
T ss_pred chhhhhhhhhcceeeEEecCCce-eEEEeccccceEEEeeccCCcccceEeec--------cCCCCceeeEEEEeccccc
Confidence 55666778999999999976444 66788887766433333222111100000 0001111111556676777
Q ss_pred cEEEEEC--CCCceeEEecCCCCCeEEEEEe--CCEEEEEeCCCcEEEEECCCCcee-EEEecCCCCceEEEEEEcCCCC
Q 008820 363 TIKAWSL--LDGTLSCTMSGHKSAVSTLAVC--NGVLYSGSRDGTIRLWSLSDHSLL-TVLEEDSSGAVSSVLSLTAVQH 437 (552)
Q Consensus 363 ~i~iwd~--~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~-~~~~~~~~~~~~~~~~~s~~~~ 437 (552)
.|.+..+ ..-.++.++.+|.+.+.+++|. +..+++|..|..+.+||+--.+-. ..+.++ ...+.. ++..+.-+
T Consensus 176 qvt~lr~~~~~~~~i~~~~~h~~~~~~l~Wd~~~~~LfSg~~d~~vi~wdigg~~g~~~el~gh-~~kV~~-l~~~~~t~ 253 (404)
T KOG1409|consen 176 QITMLKLEQNGCQLITTFNGHTGEVTCLKWDPGQRLLFSGASDHSVIMWDIGGRKGTAYELQGH-NDKVQA-LSYAQHTR 253 (404)
T ss_pred ceEEEEEeecCCceEEEEcCcccceEEEEEcCCCcEEEeccccCceEEEeccCCcceeeeeccc-hhhhhh-hhhhhhhe
Confidence 7766554 4557788999999999999999 559999999999999999765543 333333 333333 45556677
Q ss_pred EEEEEECCCcEEEEeCC
Q 008820 438 TLVVSHESGSIKVWRND 454 (552)
Q Consensus 438 ~l~~g~~dg~i~iwd~~ 454 (552)
.+++++.||.|.+||..
T Consensus 254 ~l~S~~edg~i~~w~mn 270 (404)
T KOG1409|consen 254 QLISCGEDGGIVVWNMN 270 (404)
T ss_pred eeeeccCCCeEEEEecc
Confidence 89999999999999854
No 410
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=99.22 E-value=7.1e-12 Score=118.38 Aligned_cols=94 Identities=14% Similarity=0.164 Sum_probs=65.6
Q ss_pred ccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhh-CC-CchHHHhhhhhhccccCCCchhhhhhh
Q 008820 37 ESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE-QFTKELIDYIRCVSTKASDDNIACLGM 114 (552)
Q Consensus 37 g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~llt-g~-pf~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (552)
|+..|+|||.+ ....++.++|||||||++|+|++ |+ ||.......+.
T Consensus 160 ~~~~y~aPE~~---------------~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~---------------- 208 (257)
T cd05060 160 WPLKWYAPECI---------------NYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVI---------------- 208 (257)
T ss_pred ccccccCHHHh---------------cCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHHHH----------------
Confidence 45789999998 23557789999999999999998 89 99654332111
Q ss_pred hHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHHhh
Q 008820 115 YMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIREL 165 (552)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~~~ 165 (552)
...... .........+..+.+++.+|+..+|++||++.++.+.+...
T Consensus 209 -~~~~~~---~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 255 (257)
T cd05060 209 -AMLESG---ERLPRPEECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRD 255 (257)
T ss_pred -HHHHcC---CcCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhc
Confidence 000000 00011122344588999999999999999999998887653
No 411
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.22 E-value=3.2e-12 Score=121.52 Aligned_cols=100 Identities=15% Similarity=0.071 Sum_probs=62.7
Q ss_pred hhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhh-hhhhccccCCCchh
Q 008820 32 LSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELID-YIRCVSTKASDDNI 109 (552)
Q Consensus 32 ~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~-~~~~~~~~~~~~~~ 109 (552)
.....||+.|||||++... ....++.++|+|||||++|+|++|+ ||...... .+.. ...
T Consensus 163 ~~~~~~~~~y~aPE~~~~~------------~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~-~~~------ 223 (267)
T cd06645 163 RKSFIGTPYWMAPEVAAVE------------RKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFL-MTK------ 223 (267)
T ss_pred cccccCcccccChhhhccc------------cCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHh-hhc------
Confidence 3567899999999998210 1234678999999999999999999 98542211 0000 000
Q ss_pred hhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 110 ACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
.................+.+++.+||+.+|++||++.++..
T Consensus 224 ----------~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~ 264 (267)
T cd06645 224 ----------SNFQPPKLKDKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQ 264 (267)
T ss_pred ----------cCCCCCcccccCCCCHHHHHHHHHHccCCchhCcCHHHHhc
Confidence 00000000000012234889999999999999999876543
No 412
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.22 E-value=2.5e-12 Score=126.26 Aligned_cols=117 Identities=19% Similarity=0.252 Sum_probs=84.6
Q ss_pred chhhhhhh-hhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhh
Q 008820 6 GRRVTKSV-AKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLS 82 (552)
Q Consensus 6 ~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~ 82 (552)
|+..++.| -||. |||-.+.- ++++.+++|||.|.|||.+ .| ....++++|+||||++||.
T Consensus 185 NilL~~~mnikIaDfgfS~~~~~---~~~lqt~cgsppyAaPEl~------~g--------~~y~gpe~D~Wslgvvly~ 247 (596)
T KOG0586|consen 185 NILLDENMNIKIADFGFSTFFDY---GLMLQTFCGSPPYAAPELF------NG--------KKYDGPEVDIWSLGVVLYA 247 (596)
T ss_pred hcccccccceeeeccccceeecc---cccccccCCCCCccChHhh------cC--------cccCCcceehhhhhhhhee
Confidence 34455555 5666 77866653 3579999999999999999 44 2345699999999999999
Q ss_pred hhhCC-CchHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 83 LLIGE-QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 83 lltg~-pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
|+.|. ||++.++..+. .+.++.+ ..-....+.+++++|+++|-.+|.+|+++.++.+
T Consensus 248 LV~GsLPFDG~~lk~Lr----------------~rvl~gk-----~rIp~~ms~dce~lLrk~lvl~Pskr~~~dqim~ 305 (596)
T KOG0586|consen 248 LVEGSLPFDGQNLKELR----------------PRVLRGK-----YRIPFYMSCDCEDLLRKFLVLNPSKRGPCDQIMK 305 (596)
T ss_pred eeecccccCCccccccc----------------chheeee-----ecccceeechhHHHHHHhhccCccccCCHHHhhh
Confidence 99999 99998877432 0111110 0011113446999999999999999999886655
No 413
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=99.22 E-value=7.4e-12 Score=125.01 Aligned_cols=113 Identities=17% Similarity=0.209 Sum_probs=66.6
Q ss_pred hhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhhhh-hh---ccccCCC
Q 008820 32 LSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDYI-RC---VSTKASD 106 (552)
Q Consensus 32 ~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~~~-~~---~~~~~~~ 106 (552)
.....||+.|||||++ .| ...++.++|||||||++|||++|+ ||.+...... .. ..+...+
T Consensus 161 ~~~~~~~~~y~aPE~~------~~--------~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~ 226 (372)
T cd07853 161 MTQEVVTQYYRAPEIL------MG--------SRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSL 226 (372)
T ss_pred CCCCCcCCCcCCHHHH------cC--------CCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCH
Confidence 4556789999999998 32 233568999999999999999999 9965433211 10 0111110
Q ss_pred chhhhhhhhHHHHHHHHHHHh---------hhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 107 DNIACLGMYMAWMEKVTYLLE---------NKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
..+.. ............+. ........++.+++.+||+.+|.+||++.++..
T Consensus 227 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~ 287 (372)
T cd07853 227 EAMRS--ACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALA 287 (372)
T ss_pred HHHHH--hhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhc
Confidence 00000 00000000100000 001122445889999999999999999887655
No 414
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.22 E-value=3.9e-12 Score=122.73 Aligned_cols=95 Identities=15% Similarity=0.205 Sum_probs=64.0
Q ss_pred hhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhh-hhhhccccCCCchh
Q 008820 32 LSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELID-YIRCVSTKASDDNI 109 (552)
Q Consensus 32 ~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~-~~~~~~~~~~~~~~ 109 (552)
.....|++.|||||.+ . ....+.++|||||||++|+|++|+ ||...... .+.
T Consensus 172 ~~~~~~~~~y~aPE~~------~---------~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~----------- 225 (296)
T cd06655 172 RSTMVGTPYWMAPEVV------T---------RKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALY----------- 225 (296)
T ss_pred CCCcCCCccccCcchh------c---------CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH-----------
Confidence 3456799999999998 2 245678999999999999999999 99654322 000
Q ss_pred hhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 110 ACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
..... ..............+.+++.+||..+|.+||++.++..
T Consensus 226 -------~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~ 268 (296)
T cd06655 226 -------LIATN-GTPELQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQ 268 (296)
T ss_pred -------HHHhc-CCcccCCcccCCHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence 00000 00000011112335889999999999999999887655
No 415
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=99.22 E-value=7.9e-12 Score=118.05 Aligned_cols=95 Identities=17% Similarity=0.215 Sum_probs=65.1
Q ss_pred hccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhh-CC-CchHHHhhhhhhccccCCCchhhh
Q 008820 34 DFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE-QFTKELIDYIRCVSTKASDDNIAC 111 (552)
Q Consensus 34 ~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~llt-g~-pf~~~~~~~~~~~~~~~~~~~~~~ 111 (552)
...|+..|+|||++ ....++.++|||||||++|||++ |+ ||...+...+.
T Consensus 159 ~~~~~~~y~~pE~~---------------~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~------------- 210 (257)
T cd05040 159 HLKVPFAWCAPESL---------------RTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQIL------------- 210 (257)
T ss_pred CCCCCceecCHHHh---------------cccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHH-------------
Confidence 35688999999998 22456789999999999999999 99 99643322110
Q ss_pred hhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHH
Q 008820 112 LGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCI 162 (552)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l 162 (552)
...... .. ........+..+.+++.+|++.+|.+||+..++.+.+
T Consensus 211 ----~~~~~~-~~-~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l 255 (257)
T cd05040 211 ----KKIDKE-GE-RLERPEACPQDIYNVMLQCWAHNPADRPTFAALREFL 255 (257)
T ss_pred ----HHHHhc-CC-cCCCCccCCHHHHHHHHHHCCCCcccCCCHHHHHHHh
Confidence 000000 00 0001112234588999999999999999999988765
No 416
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=99.22 E-value=9e-12 Score=117.87 Aligned_cols=116 Identities=17% Similarity=0.184 Sum_probs=73.7
Q ss_pred hhhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhh-CC-C
Q 008820 13 VAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE-Q 88 (552)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~llt-g~-p 88 (552)
..|++ |++..+...+.. ......|+..|+|||++ . ...++.++|+|||||++|+|+| |+ |
T Consensus 140 ~~~l~d~~~~~~~~~~~~~-~~~~~~~~~~y~~PE~~------~---------~~~~~~~~Di~slG~~l~~l~t~g~~p 203 (260)
T cd05073 140 VCKIADFGLARVIEDNEYT-AREGAKFPIKWTAPEAI------N---------FGSFTIKSDVWSFGILLMEIVTYGRIP 203 (260)
T ss_pred cEEECCCcceeeccCCCcc-cccCCcccccccCHhHh------c---------cCCcCccccchHHHHHHHHHHhcCCCC
Confidence 34555 344444433221 23344577889999998 2 2456789999999999999999 89 9
Q ss_pred chHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHHh
Q 008820 89 FTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRE 164 (552)
Q Consensus 89 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~~ 164 (552)
|.......+. ...... ...+.......++.+++.+|+..+|++||+..++...+..
T Consensus 204 ~~~~~~~~~~-----------------~~~~~~---~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~ 259 (260)
T cd05073 204 YPGMSNPEVI-----------------RALERG---YRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD 259 (260)
T ss_pred CCCCCHHHHH-----------------HHHhCC---CCCCCcccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 9654333111 000000 0001112233458899999999999999999988877653
No 417
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=99.21 E-value=7.6e-12 Score=118.07 Aligned_cols=93 Identities=22% Similarity=0.346 Sum_probs=65.5
Q ss_pred hhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhhhhhhccccCCCchhhh
Q 008820 33 SDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDYIRCVSTKASDDNIAC 111 (552)
Q Consensus 33 ~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~~~~~~~~~~~~~~~~~ 111 (552)
....|++.|||||++ . ....+.++|+|||||++|+|++|+ ||.......+.
T Consensus 159 ~~~~~~~~y~aPE~~------~---------~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~------------- 210 (256)
T cd08220 159 YTVVGTPCYISPELC------E---------GKPYNQKSDIWALGCVLYELASLKRAFEAANLPALV------------- 210 (256)
T ss_pred cccccCCcccCchhc------c---------CCCCCcccchHHHHHHHHHHHhCCCCcccCchHHHH-------------
Confidence 346799999999998 2 245678999999999999999999 99765433111
Q ss_pred hhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 112 LGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
..... .............+.+++.+||+.+|.+||++.++..
T Consensus 211 ----~~~~~---~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~ 252 (256)
T cd08220 211 ----LKIMS---GTFAPISDRYSPDLRQLILSMLNLDPSKRPQLSQIMA 252 (256)
T ss_pred ----HHHHh---cCCCCCCCCcCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 00000 0001111123456999999999999999999988654
No 418
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=99.21 E-value=7.6e-12 Score=118.15 Aligned_cols=93 Identities=17% Similarity=0.313 Sum_probs=64.6
Q ss_pred hhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhhhhhhccccCCCchhhh
Q 008820 33 SDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDYIRCVSTKASDDNIAC 111 (552)
Q Consensus 33 ~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~~~~~~~~~~~~~~~~~ 111 (552)
....|++.|+|||++ ....++.++|+|||||++|||++|+ ||.......+.
T Consensus 160 ~~~~~~~~~~ape~~---------------~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~------------- 211 (257)
T cd08225 160 YTCVGTPYYLSPEIC---------------QNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLV------------- 211 (257)
T ss_pred cccCCCccccCHHHH---------------cCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHH-------------
Confidence 446799999999998 2345678999999999999999999 99754433111
Q ss_pred hhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 112 LGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
.................++.+++.+|+..+|++||++.++.+
T Consensus 212 -------~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~ 253 (257)
T cd08225 212 -------LKICQGYFAPISPNFSRDLRSLISQLFKVSPRDRPSITSILK 253 (257)
T ss_pred -------HHHhcccCCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence 000000000011122345899999999999999999888754
No 419
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=99.21 E-value=9.3e-12 Score=120.61 Aligned_cols=94 Identities=17% Similarity=0.170 Sum_probs=65.7
Q ss_pred ccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhh-CC-CchHHHhhhhhhccccCCCchhhhhhh
Q 008820 37 ESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE-QFTKELIDYIRCVSTKASDDNIACLGM 114 (552)
Q Consensus 37 g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~llt-g~-pf~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (552)
+++.|||||++. ...++.++|||||||+||||+| |. ||.......+.
T Consensus 185 ~~~~y~aPE~~~---------------~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~---------------- 233 (303)
T cd05088 185 LPVRWMAIESLN---------------YSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELY---------------- 233 (303)
T ss_pred CcccccCHHHHh---------------ccCCcccccchhhhhHHHHHHhcCCCCcccCChHHHH----------------
Confidence 467899999982 2345689999999999999998 99 99654333110
Q ss_pred hHHHHHHHHHHH-hhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHHhhh
Q 008820 115 YMAWMEKVTYLL-ENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELI 166 (552)
Q Consensus 115 ~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~~~~ 166 (552)
...+... .........++.+++.+|++.+|++||++.++...+..++
T Consensus 234 -----~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~ 281 (303)
T cd05088 234 -----EKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 281 (303)
T ss_pred -----HHHhcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 1110000 0011123345889999999999999999999888877665
No 420
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=99.21 E-value=4e-12 Score=127.17 Aligned_cols=45 Identities=24% Similarity=0.479 Sum_probs=38.3
Q ss_pred hccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHH
Q 008820 34 DFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKEL 93 (552)
Q Consensus 34 ~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~ 93 (552)
..+||+.|||||++ . ...++.++|||||||+||||+||+ ||....
T Consensus 207 ~~~gt~~y~aPE~~------~---------~~~~~~~~DiwSlGvil~elltG~~Pf~~~~ 252 (377)
T cd05629 207 STVGTPDYIAPEIF------L---------QQGYGQECDWWSLGAIMFECLIGWPPFCSEN 252 (377)
T ss_pred ccCCCccccCHHHH------c---------cCCCCCceeeEecchhhhhhhcCCCCCCCCC
Confidence 36799999999998 2 245678999999999999999999 996543
No 421
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=99.21 E-value=6.6e-12 Score=121.30 Aligned_cols=94 Identities=17% Similarity=0.176 Sum_probs=66.3
Q ss_pred cccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhh-CC-CchHHHhhhhhhccccCCCchhhhhhhh
Q 008820 38 SNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE-QFTKELIDYIRCVSTKASDDNIACLGMY 115 (552)
Q Consensus 38 ~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~llt-g~-pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (552)
+..|||||++ . ...++.++|||||||+||||++ |+ ||.......+
T Consensus 181 ~~~y~aPE~~------~---------~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~------------------ 227 (297)
T cd05089 181 PVRWMAIESL------N---------YSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAEL------------------ 227 (297)
T ss_pred CccccCchhh------c---------cCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHH------------------
Confidence 5679999998 2 2456789999999999999998 99 9966443311
Q ss_pred HHHHHHHHHHH-hhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHHhhhc
Q 008820 116 MAWMEKVTYLL-ENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELII 167 (552)
Q Consensus 116 ~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~~~~~ 167 (552)
........ .........++.+++.+|++.+|.+||++.++.+.+..++.
T Consensus 228 ---~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~ 277 (297)
T cd05089 228 ---YEKLPQGYRMEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLE 277 (297)
T ss_pred ---HHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 01110000 00111233458899999999999999999999888877763
No 422
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=99.21 E-value=1e-11 Score=119.26 Aligned_cols=114 Identities=13% Similarity=0.123 Sum_probs=66.5
Q ss_pred hhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhh-hh---hhccccCCCc
Q 008820 33 SDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELID-YI---RCVSTKASDD 107 (552)
Q Consensus 33 ~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~-~~---~~~~~~~~~~ 107 (552)
..-.|++.|||||++ .+ ...++.++|||||||++|+|+||+ ||...... .+ ..........
T Consensus 159 ~~~~~~~~y~aPE~~------~~--------~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (285)
T cd07861 159 THEVVTLWYRAPEVL------LG--------SPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTED 224 (285)
T ss_pred cCCcccccccChHHh------cC--------CCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChh
Confidence 345789999999998 22 223567899999999999999999 99653221 11 0001111111
Q ss_pred hhhhhhhhHHHHHHHHHH----HhhhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 108 NIACLGMYMAWMEKVTYL----LENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
.|.............+.. ..........++.+++.+||+.+|.+||++.++..
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~ 281 (285)
T cd07861 225 VWPGVTSLPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALN 281 (285)
T ss_pred hhhcchhhHHHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence 221111111111111000 00111223456889999999999999999877654
No 423
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=99.21 E-value=9.6e-12 Score=120.12 Aligned_cols=103 Identities=15% Similarity=0.091 Sum_probs=65.5
Q ss_pred hhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhh--CC-CchHHHhhhhhhccccCCCchh
Q 008820 33 SDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI--GE-QFTKELIDYIRCVSTKASDDNI 109 (552)
Q Consensus 33 ~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~llt--g~-pf~~~~~~~~~~~~~~~~~~~~ 109 (552)
+...+++.|||||+. . .+.++.++|||||||+||||++ |. ||...+...+..
T Consensus 190 ~~~~~~~~~~~pe~~------~---------~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~~~~~---------- 244 (296)
T cd05095 190 GRAVLPIRWMSWESI------L---------LGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDEQVIE---------- 244 (296)
T ss_pred CcCcCccccCCHHHH------h---------cCCccchhhhhHHHHHHHHHHHhCCCCCccccChHHHHH----------
Confidence 344557899999987 2 2557789999999999999998 66 886533321100
Q ss_pred hhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHH
Q 008820 110 ACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIR 163 (552)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~ 163 (552)
...............+........+.+++.+|++.+|.+||++.++.+.+.
T Consensus 245 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~ 295 (296)
T cd05095 245 ---NTGEFFRDQGRQVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLL 295 (296)
T ss_pred ---HHHHHHhhccccccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 000000000000000111123345889999999999999999999888764
No 424
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.21 E-value=4.7e-12 Score=125.03 Aligned_cols=86 Identities=19% Similarity=0.237 Sum_probs=60.0
Q ss_pred cccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhhhhhhccccCCCchhhhhhhhH
Q 008820 38 SNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDYIRCVSTKASDDNIACLGMYM 116 (552)
Q Consensus 38 ~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (552)
|..|.|||++ ....++++||+|||||+||+||+|+ ||...-.. +
T Consensus 476 t~~y~APEvl---------------~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~-~------------------- 520 (612)
T KOG0603|consen 476 TLQYVAPEVL---------------AIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG-I------------------- 520 (612)
T ss_pred hhcccChhhh---------------ccCCCCcchhhHHHHHHHHHHHhCCCccccCCch-H-------------------
Confidence 7889999999 2356789999999999999999999 99541100 0
Q ss_pred HHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 117 AWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
.++..+.. .......+.+.++++.+||+.+|.+|+++.++..
T Consensus 521 ei~~~i~~--~~~s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~ 562 (612)
T KOG0603|consen 521 EIHTRIQM--PKFSECVSDEAKDLLQQLLQVDPALRLGADEIGA 562 (612)
T ss_pred HHHHhhcC--CccccccCHHHHHHHHHhccCChhhCcChhhhcc
Confidence 00110000 0000223445889999999999999999987654
No 425
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=99.21 E-value=7.2e-12 Score=119.01 Aligned_cols=98 Identities=21% Similarity=0.363 Sum_probs=63.6
Q ss_pred hhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhhhhhhccccCCCchhh
Q 008820 32 LSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDYIRCVSTKASDDNIA 110 (552)
Q Consensus 32 ~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~~~~~~~~~~~~~~~~ 110 (552)
...+.|++.|||||++. . ....+.++|+|||||++|+|++|+ ||.........
T Consensus 163 ~~~~~~~~~y~~Pe~~~------~--------~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~------------ 216 (267)
T cd06610 163 RKTFVGTPCWMAPEVME------Q--------VHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVL------------ 216 (267)
T ss_pred cccccCChhhcChHHHc------c--------ccCcCcccchHhHhHHHHHHHhCCCCccccChhhhH------------
Confidence 35567999999999982 1 114568999999999999999999 99654322110
Q ss_pred hhhhhHHHHHHHHHHHhh--hhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 111 CLGMYMAWMEKVTYLLEN--KFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
.......+..... ........+.+++.+||+.+|++||++.++..
T Consensus 217 -----~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~ 263 (267)
T cd06610 217 -----MLTLQNDPPSLETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLK 263 (267)
T ss_pred -----HHHhcCCCCCcCCccccccccHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 0000000000000 00112334789999999999999999877654
No 426
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=99.21 E-value=4.6e-12 Score=129.73 Aligned_cols=95 Identities=23% Similarity=0.288 Sum_probs=70.8
Q ss_pred cccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhhhhhhccccCCCchhhhhhhhH
Q 008820 38 SNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDYIRCVSTKASDDNIACLGMYM 116 (552)
Q Consensus 38 ~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (552)
||.|.|||++ ++++ ...+++|+|||+|||+||-|+... ||+..-..+|. ++. |.
T Consensus 218 Tp~YRsPEMI--Dlys----------g~pI~eKsDIWALGclLYkLCy~t~PFe~sg~laIl--ng~-----------Y~ 272 (738)
T KOG1989|consen 218 TPQYRSPEMI--DLYS----------GLPIGEKSDIWALGCLLYKLCYFTTPFEESGKLAIL--NGN-----------YS 272 (738)
T ss_pred CccccChHHH--hhhc----------CCCCcchhHHHHHHHHHHHHHHhCCCcCcCcceeEE--ecc-----------cc
Confidence 9999999999 3332 467899999999999999999999 99885333221 222 11
Q ss_pred HHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHHhhhc
Q 008820 117 AWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELII 167 (552)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~~~~~ 167 (552)
+|.. +.....+.++|+.||+.+|++||...++...+.++..
T Consensus 273 --------~P~~--p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~ 313 (738)
T KOG1989|consen 273 --------FPPF--PNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELAN 313 (738)
T ss_pred --------CCCC--ccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhc
Confidence 1110 1122348999999999999999999998888877653
No 427
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=99.21 E-value=9.7e-12 Score=120.90 Aligned_cols=113 Identities=15% Similarity=0.190 Sum_probs=67.1
Q ss_pred hhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhhh----hhhccccCCC
Q 008820 32 LSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDY----IRCVSTKASD 106 (552)
Q Consensus 32 ~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~~----~~~~~~~~~~ 106 (552)
.....||+.|+|||++ .+ ...++.++|||||||++|+|+||+ ||...+... +........+
T Consensus 161 ~~~~~~~~~y~aPE~~------~~--------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~ 226 (309)
T cd07872 161 YSNEVVTLWYRPPDVL------LG--------SSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTE 226 (309)
T ss_pred cccccccccccCCHHH------hC--------CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCH
Confidence 3456789999999998 22 234678999999999999999999 996543221 1111111111
Q ss_pred chhhhhhhhHHHHHHHHHHH-------hhhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 107 DNIACLGMYMAWMEKVTYLL-------ENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
..|........... ...+ .........++.+++.+||+.+|.+||++.++.+
T Consensus 227 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~ 285 (309)
T cd07872 227 ETWPGISSNDEFKN--YNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMK 285 (309)
T ss_pred HHHhhhcchhhhhh--hhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhc
Confidence 12211100000000 0000 0011123445889999999999999999887655
No 428
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=99.21 E-value=7.2e-12 Score=117.96 Aligned_cols=91 Identities=20% Similarity=0.277 Sum_probs=61.7
Q ss_pred ccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhh-CC-CchHHHhhhhhhccccCCCchhhhhhh
Q 008820 37 ESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE-QFTKELIDYIRCVSTKASDDNIACLGM 114 (552)
Q Consensus 37 g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~llt-g~-pf~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (552)
+++.|+|||++ . .+.++.++|||||||++|||++ |. ||.........
T Consensus 158 ~~~~y~aPE~~------~---------~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~---------------- 206 (252)
T cd05084 158 IPVKWTAPEAL------N---------YGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTR---------------- 206 (252)
T ss_pred CceeecCchhh------c---------CCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHHH----------------
Confidence 35679999998 2 2556789999999999999998 88 98643322110
Q ss_pred hHHHHHHHHH-HHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHH
Q 008820 115 YMAWMEKVTY-LLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIR 163 (552)
Q Consensus 115 ~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~ 163 (552)
..... .........+..+.+++.+||+.+|++||++.++.+.+.
T Consensus 207 -----~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 251 (252)
T cd05084 207 -----EAIEQGVRLPCPELCPDAVYRLMERCWEYDPGQRPSFSTVHQELQ 251 (252)
T ss_pred -----HHHHcCCCCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence 00000 000111122345889999999999999999999877653
No 429
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=99.21 E-value=9e-12 Score=124.65 Aligned_cols=100 Identities=15% Similarity=0.186 Sum_probs=68.5
Q ss_pred hhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhh-CC-CchHHHhhhhhhccccCCCchhh
Q 008820 33 SDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE-QFTKELIDYIRCVSTKASDDNIA 110 (552)
Q Consensus 33 ~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~llt-g~-pf~~~~~~~~~~~~~~~~~~~~~ 110 (552)
....|++.|||||++ . ...++.++|||||||+||||++ |+ ||.........
T Consensus 299 ~~~~~~~~y~aPE~~------~---------~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~~------------ 351 (401)
T cd05107 299 GSTFLPLKWMAPESI------F---------NNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQF------------ 351 (401)
T ss_pred CCcCCCCceeChHHh------c---------CCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchHHH------------
Confidence 345688999999998 2 2446789999999999999998 88 98653222000
Q ss_pred hhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHHhhh
Q 008820 111 CLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELI 166 (552)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~~~~ 166 (552)
....... ...........++.+++.+|+..+|.+||++.++.+.+..++
T Consensus 352 ----~~~~~~~---~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~~ 400 (401)
T cd05107 352 ----YNAIKRG---YRMAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDLL 400 (401)
T ss_pred ----HHHHHcC---CCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence 0000000 000011123446899999999999999999999999887754
No 430
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.21 E-value=9.9e-12 Score=119.27 Aligned_cols=104 Identities=20% Similarity=0.302 Sum_probs=65.7
Q ss_pred hhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhhhhhhccccCCCchhhh
Q 008820 33 SDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDYIRCVSTKASDDNIAC 111 (552)
Q Consensus 33 ~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~~~~~~~~~~~~~~~~~ 111 (552)
....||+.|+|||++ . ....+.++|+|||||++|+|+||+ ||........ ....+..
T Consensus 160 ~~~~~~~~~~aPE~~------~---------~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~----~~~~~~~--- 217 (284)
T cd06620 160 DTFVGTSTYMSPERI------Q---------GGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDD----GQDDPMG--- 217 (284)
T ss_pred CccccCcccCCHHHH------c---------cCCCCccchHHHHHHHHHHHHhCCCCCcccchhhh----hhhhhhH---
Confidence 356899999999998 2 245678999999999999999999 9975432200 0000000
Q ss_pred hhhhHHHHHHHHHHHhhhh-cC-ccccHHHHHHhhcccCCCCCcchhhHHHH
Q 008820 112 LGMYMAWMEKVTYLLENKF-GS-EFVSLQLMFCQCLNFDPGCRPLLTNVWKC 161 (552)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~-~~-~~~~l~~~~~~~l~~~p~~R~~~~~~~~~ 161 (552)
................ .. ...++.+++.+|++.+|++||++.++.+.
T Consensus 218 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~ 266 (284)
T cd06620 218 ---ILDLLQQIVQEPPPRLPSSDFPEDLRDFVDACLLKDPTERPTPQQLCAM 266 (284)
T ss_pred ---HHHHHHHHhhccCCCCCchhcCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 0001111100000000 01 23358899999999999999999887664
No 431
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=99.20 E-value=4.5e-12 Score=121.52 Aligned_cols=101 Identities=14% Similarity=0.156 Sum_probs=64.5
Q ss_pred hhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhhhhhhccccCCCchhh
Q 008820 32 LSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDYIRCVSTKASDDNIA 110 (552)
Q Consensus 32 ~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~~~~~~~~~~~~~~~~ 110 (552)
...+.||+.|||||++..... ....++.++|+|||||++|||++|+ ||.........
T Consensus 160 ~~~~~~~~~y~aPE~~~~~~~----------~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~------------ 217 (282)
T cd06643 160 RDSFIGTPYWMAPEVVMCETS----------KDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVL------------ 217 (282)
T ss_pred cccccccccccCHhhccccCC----------CCCCCCccchhhhHHHHHHHHccCCCCccccCHHHHH------------
Confidence 345789999999999821100 1234567999999999999999999 99654322110
Q ss_pred hhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 111 CLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
......... ..........++.+++.+||+.+|.+||++.++.+
T Consensus 218 -----~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 261 (282)
T cd06643 218 -----LKIAKSEPP-TLAQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQ 261 (282)
T ss_pred -----HHHhhcCCC-CCCCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 000000000 00011122345899999999999999999877554
No 432
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=99.20 E-value=7.6e-12 Score=118.47 Aligned_cols=93 Identities=15% Similarity=0.120 Sum_probs=63.9
Q ss_pred ccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhh-CC-CchHHHhhhhhhccccCCCchhhhhhh
Q 008820 37 ESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE-QFTKELIDYIRCVSTKASDDNIACLGM 114 (552)
Q Consensus 37 g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~llt-g~-pf~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (552)
++..|||||++ . ...++.++|||||||++|||+| |+ ||.+.....+.
T Consensus 166 ~~~~y~aPE~~------~---------~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~---------------- 214 (261)
T cd05068 166 FPIKWTAPEAA------L---------YNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVL---------------- 214 (261)
T ss_pred CceeccCcccc------c---------cCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHH----------------
Confidence 34689999998 2 2456789999999999999999 88 99664433111
Q ss_pred hHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHHh
Q 008820 115 YMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRE 164 (552)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~~ 164 (552)
...... . ........+..+.+++.+|++.+|.+||++.++...+..
T Consensus 215 -~~~~~~-~--~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~ 260 (261)
T cd05068 215 -QQVDQG-Y--RMPCPPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLED 260 (261)
T ss_pred -HHHHcC-C--CCCCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhc
Confidence 000000 0 000111234458999999999999999999998876653
No 433
>PRK05137 tolB translocation protein TolB; Provisional
Probab=99.20 E-value=1.2e-08 Score=103.68 Aligned_cols=214 Identities=11% Similarity=0.083 Sum_probs=133.7
Q ss_pred CcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCCEEEEEc--CCCcEEEEeCCCCCCCccccccccCCCceeeeEEEEe
Q 008820 272 KSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGD--SGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALT 349 (552)
Q Consensus 272 g~I~iwd~~~~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~--~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (552)
..|.+||.+ +...+.+..|...+.+.+|+|+++.++++.. .+..|.+||+.++... .+..... ......++
T Consensus 182 ~~l~~~d~d-g~~~~~lt~~~~~v~~p~wSpDG~~lay~s~~~g~~~i~~~dl~~g~~~-~l~~~~g-----~~~~~~~S 254 (435)
T PRK05137 182 KRLAIMDQD-GANVRYLTDGSSLVLTPRFSPNRQEITYMSYANGRPRVYLLDLETGQRE-LVGNFPG-----MTFAPRFS 254 (435)
T ss_pred eEEEEECCC-CCCcEEEecCCCCeEeeEECCCCCEEEEEEecCCCCEEEEEECCCCcEE-EeecCCC-----cccCcEEC
Confidence 378899975 4455667778889999999998886655543 3468999999866432 2221111 11134789
Q ss_pred eCCCEEE-EeeCCCc--EEEEECCCCceeEEecCCCCCeEEEEEe-CC-EEEEEeC-CC--cEEEEECCCCceeEEEecC
Q 008820 350 TSGRYLY-TGSGDRT--IKAWSLLDGTLSCTMSGHKSAVSTLAVC-NG-VLYSGSR-DG--TIRLWSLSDHSLLTVLEED 421 (552)
Q Consensus 350 ~~~~~l~-sgs~dg~--i~iwd~~~~~~~~~~~~h~~~v~~l~~~-~~-~l~s~~~-dg--~i~iwd~~~~~~~~~~~~~ 421 (552)
|+|+.|+ +.+.++. |++||+.+++.. .+..+........|+ ++ .++..+. +| .|+++|+.+++... +...
T Consensus 255 PDG~~la~~~~~~g~~~Iy~~d~~~~~~~-~Lt~~~~~~~~~~~spDG~~i~f~s~~~g~~~Iy~~d~~g~~~~~-lt~~ 332 (435)
T PRK05137 255 PDGRKVVMSLSQGGNTDIYTMDLRSGTTT-RLTDSPAIDTSPSYSPDGSQIVFESDRSGSPQLYVMNADGSNPRR-ISFG 332 (435)
T ss_pred CCCCEEEEEEecCCCceEEEEECCCCceE-EccCCCCccCceeEcCCCCEEEEEECCCCCCeEEEEECCCCCeEE-eecC
Confidence 9998664 5555555 778898877654 455566666778898 43 6665553 33 68888987665433 3322
Q ss_pred CCCceEEEEEEcCCCCEEEEEECC---CcEEEEeCCc-ceeeee-cccceEEEEEecCCEEEEEeCC------CeEEEEe
Q 008820 422 SSGAVSSVLSLTAVQHTLVVSHES---GSIKVWRNDK-FMKSMQ-THKGSVFAVFLEGKWLFTGGWD------KTVSVQE 490 (552)
Q Consensus 422 ~~~~~~~~~~~s~~~~~l~~g~~d---g~i~iwd~~~-~~~~~~-~h~~~v~~v~~~~~~l~sgs~d------g~i~iwd 490 (552)
.+.... ..|+|+|+.|+..+.+ ..|.+||... ....+. .+...-.++++||+.|+..+.+ ..++++|
T Consensus 333 -~~~~~~-~~~SpdG~~ia~~~~~~~~~~i~~~d~~~~~~~~lt~~~~~~~p~~spDG~~i~~~~~~~~~~~~~~L~~~d 410 (435)
T PRK05137 333 -GGRYST-PVWSPRGDLIAFTKQGGGQFSIGVMKPDGSGERILTSGFLVEGPTWAPNGRVIMFFRQTPGSGGAPKLYTVD 410 (435)
T ss_pred -CCcccC-eEECCCCCEEEEEEcCCCceEEEEEECCCCceEeccCCCCCCCCeECCCCCEEEEEEccCCCCCcceEEEEE
Confidence 222233 5799999999877643 3577888532 223332 1211223445689988765543 2578888
Q ss_pred cCCCee
Q 008820 491 LAGDEF 496 (552)
Q Consensus 491 ~~~~~~ 496 (552)
+.++..
T Consensus 411 l~g~~~ 416 (435)
T PRK05137 411 LTGRNE 416 (435)
T ss_pred CCCCce
Confidence 876544
No 434
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=99.20 E-value=1.4e-11 Score=117.85 Aligned_cols=117 Identities=12% Similarity=0.116 Sum_probs=76.9
Q ss_pred hhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhh-CC-Cc
Q 008820 14 AKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE-QF 89 (552)
Q Consensus 14 ~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~llt-g~-pf 89 (552)
+|.. |+++.+.............+++.|||||.+ ....++.++|+|||||++|||++ |+ ||
T Consensus 148 ~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~---------------~~~~~~~~~Di~slG~~l~el~~~g~~p~ 212 (279)
T cd05057 148 VKITDFGLAKLLDVDEKEYHAEGGKVPIKWMALESI---------------LHRIYTHKSDVWSYGVTVWELMTFGAKPY 212 (279)
T ss_pred EEECCCcccccccCcccceecCCCcccccccCHHHh---------------hcCCcCchhhHHHHHHHHHHHhcCCCCCC
Confidence 4555 455555433322122334457889999998 22456789999999999999999 99 99
Q ss_pred hHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHH-HHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHHhhh
Q 008820 90 TKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTY-LLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELI 166 (552)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~~~~ 166 (552)
+......+. ..+.. ............+.+++.+|+..+|.+||+..++.+.+..+.
T Consensus 213 ~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~ 269 (279)
T cd05057 213 EGIPAVEIP---------------------DLLEKGERLPQPPICTIDVYMVLVKCWMIDAESRPTFKELINEFSKMA 269 (279)
T ss_pred CCCCHHHHH---------------------HHHhCCCCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHH
Confidence 764433111 11000 001111223445889999999999999999999999888765
No 435
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.20 E-value=1.1e-11 Score=107.48 Aligned_cols=94 Identities=17% Similarity=0.186 Sum_probs=71.7
Q ss_pred hhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhhhhhhccccCCCchhh
Q 008820 32 LSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDYIRCVSTKASDDNIA 110 (552)
Q Consensus 32 ~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~~~~~~~~~~~~~~~~ 110 (552)
-+.++||..|.+||+. .| ...+...|+|++|++.||+|.|. ||+..+..
T Consensus 179 R~tlcgt~dyl~pEmv------~~---------~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~--------------- 228 (281)
T KOG0580|consen 179 RKTLCGTLDYLPPEMV------EG---------RGHDKFVDLWSLGVLCYEFLVGLPPFESQSHS--------------- 228 (281)
T ss_pred ceeeecccccCCHhhc------CC---------CCccchhhHHHHHHHHHHHHhcCCchhhhhhH---------------
Confidence 5789999999999999 33 44568999999999999999999 99886643
Q ss_pred hhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHH
Q 008820 111 CLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKC 161 (552)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~ 161 (552)
.+++.+..-....| .......+++|.+||.++|.+|....++...
T Consensus 229 --etYkrI~k~~~~~p----~~is~~a~dlI~~ll~~~p~~r~~l~~v~~h 273 (281)
T KOG0580|consen 229 --ETYKRIRKVDLKFP----STISGGAADLISRLLVKNPIERLALTEVMDH 273 (281)
T ss_pred --HHHHHHHHccccCC----cccChhHHHHHHHHhccCccccccHHHHhhh
Confidence 23444443322222 2244569999999999999999998776653
No 436
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=99.20 E-value=6.3e-12 Score=125.00 Aligned_cols=46 Identities=24% Similarity=0.423 Sum_probs=39.4
Q ss_pred hhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHH
Q 008820 33 SDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKEL 93 (552)
Q Consensus 33 ~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~ 93 (552)
....||+.|||||++ . ...++.++|||||||+||||++|+ ||...+
T Consensus 194 ~~~~Gt~~Y~aPE~~------~---------~~~~~~~~DvwSlGvil~ell~G~~Pf~~~~ 240 (363)
T cd05628 194 FSTVGTPDYIAPEVF------M---------QTGYNKLCDWWSLGVIMYEMLIGYPPFCSET 240 (363)
T ss_pred ccccCCccccCHHHH------c---------CCCCCCchhhhhhHHHHHHHHhCCCCCCCCC
Confidence 457899999999999 2 245678999999999999999999 997644
No 437
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=99.20 E-value=1.1e-11 Score=119.24 Aligned_cols=94 Identities=14% Similarity=0.133 Sum_probs=63.9
Q ss_pred ccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhh-CC-CchHHHhhhhhhccccCCCchhhhh
Q 008820 35 FLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE-QFTKELIDYIRCVSTKASDDNIACL 112 (552)
Q Consensus 35 ~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~llt-g~-pf~~~~~~~~~~~~~~~~~~~~~~~ 112 (552)
..+++.|||||++ . ...++.++|||||||++|||++ |. ||.+.....+.
T Consensus 192 ~~~~~~y~aPE~~------~---------~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~~~~~-------------- 242 (288)
T cd05050 192 DAIPIRWMPPESI------F---------YNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHEEVI-------------- 242 (288)
T ss_pred CccChhhcCHHHH------h---------cCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHH--------------
Confidence 3457889999998 2 2456789999999999999998 88 99653323110
Q ss_pred hhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHH
Q 008820 113 GMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIR 163 (552)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~ 163 (552)
....... ..........++.+++.+||+.+|.+||++.++.+.+.
T Consensus 243 ---~~~~~~~---~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~ 287 (288)
T cd05050 243 ---YYVRDGN---VLSCPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQ 287 (288)
T ss_pred ---HHHhcCC---CCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhh
Confidence 0000000 00001112345899999999999999999999887654
No 438
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=99.20 E-value=1.1e-11 Score=118.98 Aligned_cols=95 Identities=15% Similarity=0.268 Sum_probs=63.7
Q ss_pred hhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhhhhhhccccCCCchhhh
Q 008820 33 SDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDYIRCVSTKASDDNIAC 111 (552)
Q Consensus 33 ~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~~~~~~~~~~~~~~~~~ 111 (552)
....|++.|||||++ . ...++.++|||||||++|||++|+ ||........
T Consensus 173 ~~~~~~~~y~aPE~~------~---------~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~-------------- 223 (285)
T cd06648 173 KSLVGTPYWMAPEVI------S---------RLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQA-------------- 223 (285)
T ss_pred ccccCCccccCHHHh------c---------CCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHH--------------
Confidence 346799999999998 2 245678999999999999999999 9965332210
Q ss_pred hhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 112 LGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
........+. ...........+.+++.+||+.+|++||++.++.+
T Consensus 224 ---~~~~~~~~~~-~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~ 268 (285)
T cd06648 224 ---MKRIRDNLPP-KLKNLHKVSPRLRSFLDRMLVRDPAQRATAAELLN 268 (285)
T ss_pred ---HHHHHhcCCC-CCcccccCCHHHHHHHHHHcccChhhCcCHHHHcc
Confidence 0000000000 00001112345899999999999999999877655
No 439
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=99.20 E-value=5.8e-12 Score=120.41 Aligned_cols=95 Identities=20% Similarity=0.320 Sum_probs=64.4
Q ss_pred hhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhhhhhhccccCCCchhh
Q 008820 32 LSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDYIRCVSTKASDDNIA 110 (552)
Q Consensus 32 ~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~~~~~~~~~~~~~~~~ 110 (552)
.....|+..|+|||++ . ....+.++|+|||||++|||+||+ ||................
T Consensus 158 ~~~~~~~~~y~apE~~------~---------~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~----- 217 (277)
T cd06640 158 RNTFVGTPFWMAPEVI------Q---------QSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNN----- 217 (277)
T ss_pred cccccCcccccCHhHh------c---------cCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhhhhhcCC-----
Confidence 3446789999999998 2 245678999999999999999999 996543221110000000
Q ss_pred hhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHH
Q 008820 111 CLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKC 161 (552)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~ 161 (552)
+.........++.+++.+||+.+|.+||++.++..+
T Consensus 218 ---------------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06640 218 ---------------PPTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKH 253 (277)
T ss_pred ---------------CCCCchhhhHHHHHHHHHHcccCcccCcCHHHHHhC
Confidence 000000122348899999999999999999887664
No 440
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=99.20 E-value=6.9e-12 Score=121.10 Aligned_cols=95 Identities=13% Similarity=0.229 Sum_probs=64.0
Q ss_pred hhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhh-hhhhccccCCCchhh
Q 008820 33 SDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELID-YIRCVSTKASDDNIA 110 (552)
Q Consensus 33 ~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~-~~~~~~~~~~~~~~~ 110 (552)
....|++.|+|||++ . ....+.++|+|||||++|||++|+ ||...... .+.
T Consensus 175 ~~~~~~~~y~aPE~~------~---------~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~------------ 227 (297)
T cd06659 175 KSLVGTPYWMAPEVI------S---------RTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMK------------ 227 (297)
T ss_pred cceecCccccCHHHH------c---------cCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH------------
Confidence 456799999999998 2 245678999999999999999999 99543221 111
Q ss_pred hhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHH
Q 008820 111 CLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKC 161 (552)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~ 161 (552)
.+..... ............+.+++.+||+.+|.+||++.++.+.
T Consensus 228 ------~~~~~~~-~~~~~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~ 271 (297)
T cd06659 228 ------RLRDSPP-PKLKNAHKISPVLRDFLERMLTREPQERATAQELLDH 271 (297)
T ss_pred ------HHhccCC-CCccccCCCCHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 0000000 0000111123358899999999999999998877663
No 441
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.20 E-value=4.2e-12 Score=124.33 Aligned_cols=115 Identities=18% Similarity=0.262 Sum_probs=74.5
Q ss_pred hhhcccccccccccchhhhhhhccccccccchHHHHHH-hhccCceeecccccccccccccccchhhhhhhhhhCC-Cch
Q 008820 13 VAKVGCVGSRICDKEVGLFLSDFLESNVFFSPEVLYEL-FKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFT 90 (552)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~ 90 (552)
+|+-|=-||+-..... --.|.|||.|||||++.=+ ++ ...|++++||||||++|.||.-+. |-.
T Consensus 171 LADFGVSAKn~~t~qk---RDsFIGTPYWMAPEVvmCET~K-----------D~PYDykaDiWSlGITLIEMAqiEPPHh 236 (1187)
T KOG0579|consen 171 LADFGVSAKNKSTRQK---RDSFIGTPYWMAPEVVMCETFK-----------DQPYDYKADIWSLGITLIEMAQIEPPHH 236 (1187)
T ss_pred eecccccccchhHHhh---hccccCCcccccchheeecccc-----------CCCchhhhhHHhhhhHHHHHhccCCCcc
Confidence 4554433444444333 4579999999999998221 11 256789999999999999999999 654
Q ss_pred HHHhhhh-hhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 91 KELIDYI-RCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 91 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
.-++.++ ..+.. ..|+.+ -.+.++..++.+++.+||.++|..||+++++.+
T Consensus 237 elnpMRVllKiaK------------------SePPTL-lqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~ 288 (1187)
T KOG0579|consen 237 ELNPMRVLLKIAK------------------SEPPTL-LQPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLK 288 (1187)
T ss_pred ccchHHHHHHHhh------------------cCCCcc-cCcchhhhHHHHHHHHHHhcCCccCCCHHHHhh
Confidence 3332211 11111 001001 112345667999999999999999999887655
No 442
>PRK03629 tolB translocation protein TolB; Provisional
Probab=99.19 E-value=8.3e-09 Score=104.36 Aligned_cols=213 Identities=12% Similarity=0.108 Sum_probs=134.9
Q ss_pred eecCccceEEEEEc--CCEEEEEeC---CCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCC--cEEEE
Q 008820 248 LQGHRDCVTGLAVG--GGFLFSSSF---DKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGG--GIFVW 320 (552)
Q Consensus 248 l~~H~~~V~~l~~s--~~~l~s~s~---dg~I~iwd~~~~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg--~i~vw 320 (552)
+..+...+.+.+|+ |+.|+..+. +..|.+||+.+++... +....+.+..++|+|++..++++.+.+| .|.+|
T Consensus 194 lt~~~~~~~~p~wSPDG~~la~~s~~~g~~~i~i~dl~~G~~~~-l~~~~~~~~~~~~SPDG~~La~~~~~~g~~~I~~~ 272 (429)
T PRK03629 194 VHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQ-VASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVM 272 (429)
T ss_pred eecCCCceeeeEEcCCCCEEEEEEecCCCcEEEEEECCCCCeEE-ccCCCCCcCCeEECCCCCEEEEEEcCCCCcEEEEE
Confidence 34456688999999 888876543 4579999998876433 2223334556899999987877766666 48888
Q ss_pred eCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCC-C--cEEEEECCCCceeEEecCCCCCeEEEEEe-CC-EE
Q 008820 321 SFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGD-R--TIKAWSLLDGTLSCTMSGHKSAVSTLAVC-NG-VL 395 (552)
Q Consensus 321 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~d-g--~i~iwd~~~~~~~~~~~~h~~~v~~l~~~-~~-~l 395 (552)
|++++....... .. .......++|+|+.|+..+.+ + .|+.+|+.+++.. .+..+.....+..|+ ++ .+
T Consensus 273 d~~tg~~~~lt~----~~--~~~~~~~wSPDG~~I~f~s~~~g~~~Iy~~d~~~g~~~-~lt~~~~~~~~~~~SpDG~~I 345 (429)
T PRK03629 273 DLASGQIRQVTD----GR--SNNTEPTWFPDSQNLAYTSDQAGRPQVYKVNINGGAPQ-RITWEGSQNQDADVSSDGKFM 345 (429)
T ss_pred ECCCCCEEEccC----CC--CCcCceEECCCCCEEEEEeCCCCCceEEEEECCCCCeE-EeecCCCCccCEEECCCCCEE
Confidence 987654322111 11 111234789999988776654 4 4555577666543 333344455677888 33 66
Q ss_pred EEEeCC---CcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEECCCc---EEEEeC-CcceeeeecccceEE
Q 008820 396 YSGSRD---GTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGS---IKVWRN-DKFMKSMQTHKGSVF 468 (552)
Q Consensus 396 ~s~~~d---g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~---i~iwd~-~~~~~~~~~h~~~v~ 468 (552)
+..+.+ ..|.+||+.+++.. .+.... .... ..|+|||+.|+.++.++. +++++. +.....+.+|.+.+.
T Consensus 346 a~~~~~~g~~~I~~~dl~~g~~~-~Lt~~~--~~~~-p~~SpDG~~i~~~s~~~~~~~l~~~~~~G~~~~~l~~~~~~~~ 421 (429)
T PRK03629 346 VMVSSNGGQQHIAKQDLATGGVQ-VLTDTF--LDET-PSIAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARLPATDGQVK 421 (429)
T ss_pred EEEEccCCCceEEEEECCCCCeE-EeCCCC--CCCC-ceECCCCCEEEEEEcCCCceEEEEEECCCCCeEECccCCCCcC
Confidence 555433 35888999887643 333221 1112 579999999999888765 566675 345666777777666
Q ss_pred EEEe
Q 008820 469 AVFL 472 (552)
Q Consensus 469 ~v~~ 472 (552)
..+|
T Consensus 422 ~p~W 425 (429)
T PRK03629 422 FPAW 425 (429)
T ss_pred Cccc
Confidence 5554
No 443
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.19 E-value=1.4e-11 Score=121.05 Aligned_cols=118 Identities=14% Similarity=0.200 Sum_probs=74.9
Q ss_pred hhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhh-CC-Cc
Q 008820 14 AKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE-QF 89 (552)
Q Consensus 14 ~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~llt-g~-pf 89 (552)
.|++ |+++.+.............+++.|||||++ . ...++.++|||||||+||||++ |. ||
T Consensus 173 ~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~------~---------~~~~~~~~Di~slG~il~el~~~g~~p~ 237 (334)
T cd05100 173 MKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEAL------F---------DRVYTHQSDVWSFGVLLWEIFTLGGSPY 237 (334)
T ss_pred EEECCcccceecccccccccccCCCcCceEcCHHHh------c---------cCCcCchhhhHHHHHHHHHHHhcCCCCC
Confidence 4444 445544433221112334456789999998 2 2456689999999999999999 78 99
Q ss_pred hHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHHhhh
Q 008820 90 TKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELI 166 (552)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~~~~ 166 (552)
.......+. ...... ...........++.+++.+|++.+|.+||++.++...+..+.
T Consensus 238 ~~~~~~~~~-----------------~~~~~~---~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~ 294 (334)
T cd05100 238 PGIPVEELF-----------------KLLKEG---HRMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVL 294 (334)
T ss_pred CCCCHHHHH-----------------HHHHcC---CCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHh
Confidence 664433110 000000 000011112345889999999999999999999999888765
No 444
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=99.19 E-value=1.1e-11 Score=118.08 Aligned_cols=94 Identities=17% Similarity=0.170 Sum_probs=65.5
Q ss_pred ccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhh-CC-CchHHHhhhhhhccccCCCchhhhhhh
Q 008820 37 ESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE-QFTKELIDYIRCVSTKASDDNIACLGM 114 (552)
Q Consensus 37 g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~llt-g~-pf~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (552)
.++.|+|||++ ....++.++|||||||+||||++ |+ ||.......+.
T Consensus 173 ~~~~y~apE~~---------------~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~---------------- 221 (270)
T cd05047 173 LPVRWMAIESL---------------NYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELY---------------- 221 (270)
T ss_pred CccccCChHHH---------------ccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHHHHH----------------
Confidence 36789999998 22456789999999999999997 99 99654332110
Q ss_pred hHHHHHHHHHH-HhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHHhhh
Q 008820 115 YMAWMEKVTYL-LENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELI 166 (552)
Q Consensus 115 ~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~~~~ 166 (552)
...+.. ..........++.+++.+|+..+|.+||++.++...+.+++
T Consensus 222 -----~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~ 269 (270)
T cd05047 222 -----EKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 269 (270)
T ss_pred -----HHHhCCCCCCCCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence 100000 00011112345889999999999999999999998887654
No 445
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=99.19 E-value=9.1e-12 Score=117.93 Aligned_cols=93 Identities=19% Similarity=0.388 Sum_probs=63.1
Q ss_pred hccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhh-hCC-CchHHHhhhhhhccccCCCchhhh
Q 008820 34 DFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLL-IGE-QFTKELIDYIRCVSTKASDDNIAC 111 (552)
Q Consensus 34 ~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~ll-tg~-pf~~~~~~~~~~~~~~~~~~~~~~ 111 (552)
...||+.|||||++ .+ ...++.++|||||||+||||+ +|+ ||.........
T Consensus 167 ~~~~~~~y~aPE~~------~~--------~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~------------- 219 (262)
T cd05077 167 ECVERIPWIAPECV------ED--------SKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEKE------------- 219 (262)
T ss_pred cccccccccChhhh------cC--------CCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHHH-------------
Confidence 46789999999998 21 234668999999999999998 577 88653322110
Q ss_pred hhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHH
Q 008820 112 LGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCI 162 (552)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l 162 (552)
. .... ..........++.+++.+||+.+|.+||+..++.+.+
T Consensus 220 ----~-~~~~----~~~~~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~ 261 (262)
T cd05077 220 ----R-FYEG----QCMLVTPSCKELADLMTHCMNYDPNQRPFFRAIMRDI 261 (262)
T ss_pred ----H-HHhc----CccCCCCChHHHHHHHHHHcCCChhhCcCHHHHHHhc
Confidence 0 0000 0000011223588999999999999999999887764
No 446
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.19 E-value=1.2e-11 Score=117.60 Aligned_cols=137 Identities=20% Similarity=0.287 Sum_probs=89.7
Q ss_pred EEecchhhhhhhhhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhh
Q 008820 2 ILVMGRRVTKSVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACI 79 (552)
Q Consensus 2 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~ 79 (552)
||+|| .-+-|++ |||+.+..+.- .++-+-|.+|.|||++. ..+.++.+.|+||+|||
T Consensus 141 iLi~~----~~~iKiaDFGLARev~SkpP---YTeYVSTRWYRAPEvLL--------------rs~~Ys~pvD~wA~GcI 199 (538)
T KOG0661|consen 141 ILISG----NDVIKIADFGLAREVRSKPP---YTEYVSTRWYRAPEVLL--------------RSGYYSSPVDMWAVGCI 199 (538)
T ss_pred eEecc----cceeEecccccccccccCCC---cchhhhcccccchHHhh--------------hccccCCchHHHHHHHH
Confidence 78888 3455666 89999888854 68999999999999993 24778899999999999
Q ss_pred hhhhhhCC-CchHHH-hhhh---hhccccCCCchhhhhhhhHHHHHH---HHHHH----hhhhcCccccHHHHHHhhccc
Q 008820 80 LLSLLIGE-QFTKEL-IDYI---RCVSTKASDDNIACLGMYMAWMEK---VTYLL----ENKFGSEFVSLQLMFCQCLNF 147 (552)
Q Consensus 80 l~~lltg~-pf~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~----~~~~~~~~~~l~~~~~~~l~~ 147 (552)
++|+.+=+ -|.+.+ ..+| -++-+-.....|-.. ++....- .+... .........++.+++.+||+.
T Consensus 200 ~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg--~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~W 277 (538)
T KOG0661|consen 200 MAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEG--YNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAW 277 (538)
T ss_pred HHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhH--HHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcC
Confidence 99999999 664432 2222 323333332233110 1100000 01111 111222455688999999999
Q ss_pred CCCCCcchhhHHHH
Q 008820 148 DPGCRPLLTNVWKC 161 (552)
Q Consensus 148 ~p~~R~~~~~~~~~ 161 (552)
||.+||++.+..+.
T Consensus 278 DP~kRpTA~~al~~ 291 (538)
T KOG0661|consen 278 DPDKRPTASQALQH 291 (538)
T ss_pred CCccCccHHHHhcC
Confidence 99999999876653
No 447
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=99.19 E-value=1.3e-11 Score=116.86 Aligned_cols=102 Identities=22% Similarity=0.302 Sum_probs=67.5
Q ss_pred hhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhhhhhhccccCCCchh
Q 008820 31 FLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDYIRCVSTKASDDNI 109 (552)
Q Consensus 31 ~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~~~~~~~~~~~~~~~ 109 (552)
......||+.|+|||++ . .....+.++||||||+++|+|++|. ||.........
T Consensus 154 ~~~~~~~~~~y~aPE~~------~--------~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~----------- 208 (260)
T PF00069_consen 154 NFNPFVGTPEYMAPEVL------Q--------QGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQL----------- 208 (260)
T ss_dssp EBSSSSSSGGGSCHHHH------T--------TTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHH-----------
T ss_pred ccccccccccccccccc------c--------ccccccccccccccccccccccccccccccccchhhh-----------
Confidence 36788999999999998 2 0356778999999999999999999 99764111000
Q ss_pred hhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 110 ACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
........................+.+++.+||+.+|.+||++.++.+
T Consensus 209 ---~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~ 256 (260)
T PF00069_consen 209 ---EIIEKILKRPLPSSSQQSREKSEELRDLIKKMLSKDPEQRPSAEELLK 256 (260)
T ss_dssp ---HHHHHHHHTHHHHHTTSHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHT
T ss_pred ---hhhhhcccccccccccccchhHHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 000111111111111111112256999999999999999999887654
No 448
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=99.19 E-value=7.9e-12 Score=121.05 Aligned_cols=115 Identities=16% Similarity=0.206 Sum_probs=66.3
Q ss_pred hhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhhhh-hh---ccccCCC
Q 008820 32 LSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDYI-RC---VSTKASD 106 (552)
Q Consensus 32 ~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~~~-~~---~~~~~~~ 106 (552)
.....||+.|+|||++. + ...++.++|||||||+||||+||+ ||...+.... .. .......
T Consensus 161 ~~~~~~~~~y~~PE~~~------~--------~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~ 226 (301)
T cd07873 161 YSNEVVTLWYRPPDILL------G--------STDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTE 226 (301)
T ss_pred ccccceeecccCcHHHh------C--------CCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCh
Confidence 34567899999999982 2 233567999999999999999999 9965433211 10 0011111
Q ss_pred chhhhhhhhHHHHH----H-HHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 107 DNIACLGMYMAWME----K-VTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 107 ~~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
..|........+.. . .........+.....+.+++.+||..+|.+||++.++..
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~ 285 (301)
T cd07873 227 ETWPGILSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMK 285 (301)
T ss_pred hhchhhhccccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 11110000000000 0 000001111223445889999999999999999887655
No 449
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=99.19 E-value=1.4e-11 Score=117.48 Aligned_cols=98 Identities=15% Similarity=0.251 Sum_probs=66.8
Q ss_pred hhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhh-CC-CchHHHhhhhhhccccCCCchhh
Q 008820 33 SDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE-QFTKELIDYIRCVSTKASDDNIA 110 (552)
Q Consensus 33 ~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~llt-g~-pf~~~~~~~~~~~~~~~~~~~~~ 110 (552)
....+++.||+||.+. ....+.++|||||||++|||++ |+ ||.......+.
T Consensus 173 ~~~~~~~~~~~pe~~~---------------~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~~~------------ 225 (273)
T cd05074 173 CASKLPVKWLALESLA---------------DNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIY------------ 225 (273)
T ss_pred CCccCchhhcCHhHHh---------------cCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHHHH------------
Confidence 3445678999999982 2445689999999999999999 88 98654322110
Q ss_pred hhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHHhh
Q 008820 111 CLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIREL 165 (552)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~~~ 165 (552)
...... . ........+..+.+++.+|++.+|++||++.++...+..+
T Consensus 226 -----~~~~~~--~-~~~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 226 -----NYLIKG--N-RLKQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred -----HHHHcC--C-cCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 000000 0 0000112334589999999999999999999999887654
No 450
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=99.19 E-value=1.2e-11 Score=116.67 Aligned_cols=93 Identities=16% Similarity=0.288 Sum_probs=64.5
Q ss_pred hhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhhhhhhccccCCCchhhh
Q 008820 33 SDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDYIRCVSTKASDDNIAC 111 (552)
Q Consensus 33 ~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~~~~~~~~~~~~~~~~~ 111 (552)
....|++.|+|||++ . ....+.++|+|||||++|+|++|+ ||.......+.
T Consensus 159 ~~~~~~~~~~~pe~~------~---------~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~------------- 210 (256)
T cd08218 159 RTCIGTPYYLSPEIC------E---------NRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLV------------- 210 (256)
T ss_pred hhccCCccccCHHHh------C---------CCCCCCccchhHHHHHHHHHHcCCCCccCCCHHHHH-------------
Confidence 456799999999998 2 245668999999999999999999 99654333110
Q ss_pred hhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 112 LGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
....... ..........++.+++.+|++.+|.+||++.++.+
T Consensus 211 ---~~~~~~~----~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~ 252 (256)
T cd08218 211 ---LKIIRGS----YPPVSSHYSYDLRNLVSQLFKRNPRDRPSVNSILE 252 (256)
T ss_pred ---HHHhcCC----CCCCcccCCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence 0000000 00011122345889999999999999999988765
No 451
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=99.19 E-value=5.1e-12 Score=119.26 Aligned_cols=96 Identities=13% Similarity=0.213 Sum_probs=63.2
Q ss_pred hhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhhhhhhccccCCCchhh
Q 008820 32 LSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDYIRCVSTKASDDNIA 110 (552)
Q Consensus 32 ~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~~~~~~~~~~~~~~~~ 110 (552)
.....|++.|+|||++ .+ ..++.++|||||||++|+|++|+ ||................+
T Consensus 156 ~~~~~~~~~y~~PE~~------~~---------~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~~~~~~---- 216 (256)
T cd06612 156 RNTVIGTPFWMAPEVI------QE---------IGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIPNKPP---- 216 (256)
T ss_pred cccccCCccccCHHHH------hc---------CCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhhccCCC----
Confidence 3456799999999998 22 45678999999999999999999 9965332211000000000
Q ss_pred hhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 111 CLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
.. ..........+.+++.+|++.+|++||++.++..
T Consensus 217 -----~~---------~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~ 252 (256)
T cd06612 217 -----PT---------LSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQ 252 (256)
T ss_pred -----CC---------CCchhhcCHHHHHHHHHHHhcChhhCcCHHHHhc
Confidence 00 0000011234889999999999999999887654
No 452
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=99.19 E-value=1.3e-11 Score=116.14 Aligned_cols=91 Identities=19% Similarity=0.204 Sum_probs=63.4
Q ss_pred cccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhh-CC-CchHHHhhhhhhccccCCCchhhhhh
Q 008820 36 LESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE-QFTKELIDYIRCVSTKASDDNIACLG 113 (552)
Q Consensus 36 ~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~llt-g~-pf~~~~~~~~~~~~~~~~~~~~~~~~ 113 (552)
.+++.|+|||++ ....++.++|||||||++|+|++ |. ||.........
T Consensus 155 ~~~~~y~aPE~~---------------~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~--------------- 204 (250)
T cd05085 155 QIPIKWTAPEAL---------------NYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAR--------------- 204 (250)
T ss_pred CCcccccCHHHh---------------ccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHH---------------
Confidence 446789999998 23556789999999999999999 99 99654322110
Q ss_pred hhHHHHHHHHHH-HhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHH
Q 008820 114 MYMAWMEKVTYL-LENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCI 162 (552)
Q Consensus 114 ~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l 162 (552)
...... ...........+.+++.+|++.+|++||++.++.+.+
T Consensus 205 ------~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l 248 (250)
T cd05085 205 ------EQVEKGYRMSCPQKCPDDVYKVMQRCWDYKPENRPKFSELQKEL 248 (250)
T ss_pred ------HHHHcCCCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHh
Confidence 000000 0011112334589999999999999999999988764
No 453
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=99.19 E-value=5.8e-12 Score=119.01 Aligned_cols=115 Identities=21% Similarity=0.213 Sum_probs=70.5
Q ss_pred hhhhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhh-CC-
Q 008820 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE- 87 (552)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~llt-g~- 87 (552)
..+|++ |+++.+.............+...|+|||.+. ....+.++||||||+++||+++ |+
T Consensus 140 ~~~Kl~~f~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~---------------~~~~~~ksDVysfG~~l~ei~~~~~~ 204 (259)
T PF07714_consen 140 GQVKLSDFGLSRPISEKSKYKNDSSQQLPLRYLAPEVLK---------------DGEYTKKSDVYSFGMLLYEILTLGKF 204 (259)
T ss_dssp TEEEEESTTTGEETTTSSSEEESTTSESGGGGS-HHHHH---------------HSEESHHHHHHHHHHHHHHHHTTSSG
T ss_pred ccccccccccccccccccccccccccccccccccccccc---------------cccccccccccccccccccccccccc
Confidence 356666 3444442222222345567889999999992 2446789999999999999999 77
Q ss_pred CchHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHH-hhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHH
Q 008820 88 QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLL-ENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCI 162 (552)
Q Consensus 88 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l 162 (552)
||.......+ .....+.. ..........+.+++.+|++.+|.+||++.++.+.|
T Consensus 205 p~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 205 PFSDYDNEEI---------------------IEKLKQGQRLPIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp TTTTSCHHHH---------------------HHHHHTTEETTSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred cccccccccc---------------------cccccccccceeccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 9865332211 11110000 111122344588999999999999999999887753
No 454
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=99.19 E-value=1.4e-11 Score=118.47 Aligned_cols=97 Identities=15% Similarity=0.237 Sum_probs=67.2
Q ss_pred hccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhh-CC-CchHHHhhhhhhccccCCCchhhh
Q 008820 34 DFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE-QFTKELIDYIRCVSTKASDDNIAC 111 (552)
Q Consensus 34 ~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~llt-g~-pf~~~~~~~~~~~~~~~~~~~~~~ 111 (552)
...+++.|||||++ . ...++.++|+|||||++|||++ |. ||.......+
T Consensus 180 ~~~~~~~y~~pE~~------~---------~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~~-------------- 230 (288)
T cd05061 180 KGLLPVRWMAPESL------K---------DGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQV-------------- 230 (288)
T ss_pred CCcccccccCHHHh------c---------cCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHHH--------------
Confidence 34567889999998 2 2556789999999999999999 67 9965332211
Q ss_pred hhhhHHHHHHHHHHH-hhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHHhhh
Q 008820 112 LGMYMAWMEKVTYLL-ENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELI 166 (552)
Q Consensus 112 ~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~~~~ 166 (552)
........ ..........+.+++.+||+.+|.+||++.++.+.+....
T Consensus 231 -------~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~ 279 (288)
T cd05061 231 -------LKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL 279 (288)
T ss_pred -------HHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhc
Confidence 01000000 0001122346999999999999999999999988877653
No 455
>KOG2139 consensus WD40 repeat protein [General function prediction only]
Probab=99.19 E-value=1.6e-08 Score=92.54 Aligned_cols=235 Identities=15% Similarity=0.121 Sum_probs=140.3
Q ss_pred CccceEEEEEc---CCEEEEEeCCCcEEEEeCCCC----eE----------EEEEeCCCCCeEEEEEecCCCCEEEEEcC
Q 008820 251 HRDCVTGLAVG---GGFLFSSSFDKSIHVWSLKDF----SH----------VHTFKGHDHKVMAVVYVDEDQPLCISGDS 313 (552)
Q Consensus 251 H~~~V~~l~~s---~~~l~s~s~dg~I~iwd~~~~----~~----------~~~~~~h~~~v~~v~~~~~~~~~l~s~~~ 313 (552)
-+..|+|++|- ++.|+.|+..| |.+|..... +. +...++| .+|+++.|.+++..++-++-.
T Consensus 139 sQrnvtclawRPlsaselavgCr~g-IciW~~s~tln~~r~~~~~s~~~~qvl~~pgh-~pVtsmqwn~dgt~l~tAS~g 216 (445)
T KOG2139|consen 139 SQRNVTCLAWRPLSASELAVGCRAG-ICIWSDSRTLNANRNIRMMSTHHLQVLQDPGH-NPVTSMQWNEDGTILVTASFG 216 (445)
T ss_pred hhcceeEEEeccCCcceeeeeecce-eEEEEcCcccccccccccccccchhheeCCCC-ceeeEEEEcCCCCEEeecccC
Confidence 35679999997 77888888765 999986421 11 1122345 789999999987766555556
Q ss_pred CCcEEEEeCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe-C
Q 008820 314 GGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC-N 392 (552)
Q Consensus 314 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~-~ 392 (552)
|..|.+||.+++........-. .......++||+.+|++++-|+..++|+..+.........-.+.|...+|+ .
T Consensus 217 sssi~iWdpdtg~~~pL~~~gl-----gg~slLkwSPdgd~lfaAt~davfrlw~e~q~wt~erw~lgsgrvqtacWspc 291 (445)
T KOG2139|consen 217 SSSIMIWDPDTGQKIPLIPKGL-----GGFSLLKWSPDGDVLFAATCDAVFRLWQENQSWTKERWILGSGRVQTACWSPC 291 (445)
T ss_pred cceEEEEcCCCCCcccccccCC-----CceeeEEEcCCCCEEEEecccceeeeehhcccceecceeccCCceeeeeecCC
Confidence 8999999999876554441111 223467899999999999999999999654432222222234588999998 3
Q ss_pred C--EEEEEeCCCcEEEEECCCCce--e-------EEEec-------CCC----CceEEEEEEcCCCCEEEEEECCC----
Q 008820 393 G--VLYSGSRDGTIRLWSLSDHSL--L-------TVLEE-------DSS----GAVSSVLSLTAVQHTLVVSHESG---- 446 (552)
Q Consensus 393 ~--~l~s~~~dg~i~iwd~~~~~~--~-------~~~~~-------~~~----~~~~~~~~~s~~~~~l~~g~~dg---- 446 (552)
+ +|++++..-.++-........ . ..+.. ... +.....+++.|.|.++++.-..+
T Consensus 292 GsfLLf~~sgsp~lysl~f~~~~~~~~~~~~~k~~lliaDL~e~ti~ag~~l~cgeaq~lawDpsGeyLav~fKg~~~v~ 371 (445)
T KOG2139|consen 292 GSFLLFACSGSPRLYSLTFDGEDSVFLRPQSIKRVLLIADLQEVTICAGQRLCCGEAQCLAWDPSGEYLAVIFKGQSFVL 371 (445)
T ss_pred CCEEEEEEcCCceEEEEeecCCCccccCcccceeeeeeccchhhhhhcCcccccCccceeeECCCCCEEEEEEcCCchhh
Confidence 3 555555544443322211100 0 00000 000 11223479999999999876543
Q ss_pred ----cEEEEeCCc-ceeee------ecccceEEEEEe---cCCEEEEEeCCCeEEEEecC
Q 008820 447 ----SIKVWRNDK-FMKSM------QTHKGSVFAVFL---EGKWLFTGGWDKTVSVQELA 492 (552)
Q Consensus 447 ----~i~iwd~~~-~~~~~------~~h~~~v~~v~~---~~~~l~sgs~dg~i~iwd~~ 492 (552)
.|.+||+++ +...+ .+....-.++.+ ++.+|..+=..|.+.-|++.
T Consensus 372 ~~k~~i~~fdtr~sp~vels~cg~i~ge~P~~IsF~pl~n~g~lLsiaWsTGriq~ypl~ 431 (445)
T KOG2139|consen 372 LCKLHISRFDTRKSPPVELSYCGMIGGEYPAYISFGPLKNEGRLLSIAWSTGRIQRYPLT 431 (445)
T ss_pred hhhhhhhhhcccccCceEEEecccccCCCCceEEeeecccCCcEEEEEeccCceEeeeeE
Confidence 355677654 22211 111122333433 55566666566777666653
No 456
>PRK02889 tolB translocation protein TolB; Provisional
Probab=99.19 E-value=5.2e-09 Score=105.94 Aligned_cols=211 Identities=9% Similarity=0.114 Sum_probs=125.9
Q ss_pred CcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCC--CcEEEEeCCCCCCCccccccccCCCceeeeEEEEe
Q 008820 272 KSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSG--GGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALT 349 (552)
Q Consensus 272 g~I~iwd~~~~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~d--g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (552)
..|.++|.. +.....+..+...+.+.+|+|++..++++...+ ..|.+||+.++... .+...... .....++
T Consensus 176 ~~L~~~D~d-G~~~~~l~~~~~~v~~p~wSPDG~~la~~s~~~~~~~I~~~dl~~g~~~-~l~~~~g~-----~~~~~~S 248 (427)
T PRK02889 176 YQLQISDAD-GQNAQSALSSPEPIISPAWSPDGTKLAYVSFESKKPVVYVHDLATGRRR-VVANFKGS-----NSAPAWS 248 (427)
T ss_pred cEEEEECCC-CCCceEeccCCCCcccceEcCCCCEEEEEEccCCCcEEEEEECCCCCEE-EeecCCCC-----ccceEEC
Confidence 457777764 455555667788899999999887665554333 45999999876432 22211111 1234789
Q ss_pred eCCCEEE-EeeCCCcEEEEE--CCCCceeEEecCCCCCeEEEEEe-CC-EEEEEe-CCCcEEEEEC--CCCceeEEEecC
Q 008820 350 TSGRYLY-TGSGDRTIKAWS--LLDGTLSCTMSGHKSAVSTLAVC-NG-VLYSGS-RDGTIRLWSL--SDHSLLTVLEED 421 (552)
Q Consensus 350 ~~~~~l~-sgs~dg~i~iwd--~~~~~~~~~~~~h~~~v~~l~~~-~~-~l~s~~-~dg~i~iwd~--~~~~~~~~~~~~ 421 (552)
|+|+.|+ +.+.+|...+|. +.++. ...+..+........|+ ++ .++..+ .+|...+|.+ .+++.. .+...
T Consensus 249 PDG~~la~~~~~~g~~~Iy~~d~~~~~-~~~lt~~~~~~~~~~wSpDG~~l~f~s~~~g~~~Iy~~~~~~g~~~-~lt~~ 326 (427)
T PRK02889 249 PDGRTLAVALSRDGNSQIYTVNADGSG-LRRLTQSSGIDTEPFFSPDGRSIYFTSDRGGAPQIYRMPASGGAAQ-RVTFT 326 (427)
T ss_pred CCCCEEEEEEccCCCceEEEEECCCCC-cEECCCCCCCCcCeEEcCCCCEEEEEecCCCCcEEEEEECCCCceE-EEecC
Confidence 9998765 567777766664 44444 45555555556778898 44 555544 3566666654 444432 22222
Q ss_pred CCCceEEEEEEcCCCCEEEEEECCC---cEEEEeCCc-ceeeeecc-cceEEEEEecCCEEEEEeCCC---eEEEEecCC
Q 008820 422 SSGAVSSVLSLTAVQHTLVVSHESG---SIKVWRNDK-FMKSMQTH-KGSVFAVFLEGKWLFTGGWDK---TVSVQELAG 493 (552)
Q Consensus 422 ~~~~~~~~~~~s~~~~~l~~g~~dg---~i~iwd~~~-~~~~~~~h-~~~v~~v~~~~~~l~sgs~dg---~i~iwd~~~ 493 (552)
. ..... ..|+|+|++++..+.++ .|++||... ....+..+ ...-.++++||+.|+..+.++ .+++.++.+
T Consensus 327 g-~~~~~-~~~SpDG~~Ia~~s~~~g~~~I~v~d~~~g~~~~lt~~~~~~~p~~spdg~~l~~~~~~~g~~~l~~~~~~g 404 (427)
T PRK02889 327 G-SYNTS-PRISPDGKLLAYISRVGGAFKLYVQDLATGQVTALTDTTRDESPSFAPNGRYILYATQQGGRSVLAAVSSDG 404 (427)
T ss_pred C-CCcCc-eEECCCCCEEEEEEccCCcEEEEEEECCCCCeEEccCCCCccCceECCCCCEEEEEEecCCCEEEEEEECCC
Confidence 1 11122 58999999998777654 589999653 22233221 122234556999888877554 355556643
No 457
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=99.19 E-value=1.6e-11 Score=117.75 Aligned_cols=113 Identities=13% Similarity=0.144 Sum_probs=62.9
Q ss_pred hhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cc-hHHHhh-hhhh---ccccCCC
Q 008820 33 SDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QF-TKELID-YIRC---VSTKASD 106 (552)
Q Consensus 33 ~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf-~~~~~~-~~~~---~~~~~~~ 106 (552)
....||+.|+|||++ .| ...++.++|||||||++|||+||. || ...... .+.. .......
T Consensus 157 ~~~~~~~~y~aPE~~------~~--------~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 222 (284)
T cd07839 157 SAEVVTLWYRPPDVL------FG--------AKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTE 222 (284)
T ss_pred CCCccccCCcChHHH------hC--------CcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCCh
Confidence 445789999999998 22 123468999999999999999999 86 222211 1100 0011011
Q ss_pred chhhhhhhhHHHHHHHHHHH-----hhhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 107 DNIACLGMYMAWMEKVTYLL-----ENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
..|......... ...+..+ .+..+....++.+++.+||+.+|.+||++.++..
T Consensus 223 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~ 280 (284)
T cd07839 223 ESWPGVSKLPDY-KPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQ 280 (284)
T ss_pred HHhHHhhhcccc-cccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhc
Confidence 011000000000 0000000 0111123445889999999999999999887654
No 458
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=99.19 E-value=8.3e-12 Score=120.20 Aligned_cols=96 Identities=15% Similarity=0.229 Sum_probs=64.2
Q ss_pred hhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhhhhhhccccCCCchhhh
Q 008820 33 SDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDYIRCVSTKASDDNIAC 111 (552)
Q Consensus 33 ~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~~~~~~~~~~~~~~~~~ 111 (552)
....||+.|+|||++ ....++.++|||||||++|||++|+ ||........
T Consensus 176 ~~~~~~~~y~aPE~~---------------~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~-------------- 226 (292)
T cd06658 176 KSLVGTPYWMAPEVI---------------SRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQA-------------- 226 (292)
T ss_pred ceeecCccccCHHHH---------------ccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH--------------
Confidence 456799999999998 2345678999999999999999999 9965332210
Q ss_pred hhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHH
Q 008820 112 LGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKC 161 (552)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~ 161 (552)
.......... ...........+.+++.+|+..+|.+||++.++.+.
T Consensus 227 ---~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 272 (292)
T cd06658 227 ---MRRIRDNLPP-RVKDSHKVSSVLRGFLDLMLVREPSQRATAQELLQH 272 (292)
T ss_pred ---HHHHHhcCCC-ccccccccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 0000000000 000001123348899999999999999998877653
No 459
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=99.18 E-value=8e-12 Score=120.07 Aligned_cols=101 Identities=13% Similarity=0.113 Sum_probs=64.0
Q ss_pred hhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhhhhhhccccCCCchhhh
Q 008820 33 SDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDYIRCVSTKASDDNIAC 111 (552)
Q Consensus 33 ~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~~~~~~~~~~~~~~~~~ 111 (552)
....||+.|||||++..... ....++.++|||||||++|||++|+ ||.......... ...
T Consensus 182 ~~~~~~~~y~aPE~~~~~~~----------~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~~-~~~-------- 242 (286)
T cd06638 182 NTSVGTPFWMAPEVIACEQQ----------LDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRALF-KIP-------- 242 (286)
T ss_pred ccccCCCcccChhhhchhhh----------ccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHHh-hcc--------
Confidence 34579999999999832110 1234678999999999999999999 996533221000 000
Q ss_pred hhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHH
Q 008820 112 LGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKC 161 (552)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~ 161 (552)
.. ..............+.+++.+||+.+|++||++.++.+.
T Consensus 243 --------~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~ 283 (286)
T cd06638 243 --------RN-PPPTLHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQH 283 (286)
T ss_pred --------cc-CCCcccCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhc
Confidence 00 000000001122358899999999999999998887653
No 460
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=99.18 E-value=1.4e-11 Score=116.66 Aligned_cols=97 Identities=15% Similarity=0.111 Sum_probs=66.6
Q ss_pred hccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC--CchHHHhhhhhhccccCCCchhhh
Q 008820 34 DFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE--QFTKELIDYIRCVSTKASDDNIAC 111 (552)
Q Consensus 34 ~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~--pf~~~~~~~~~~~~~~~~~~~~~~ 111 (552)
...+++.|||||++ . ...++.++|||||||++|||++|. ||.......+
T Consensus 161 ~~~~~~~y~aPE~~------~---------~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~-------------- 211 (262)
T cd05058 161 GAKLPVKWMALESL------Q---------TQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDI-------------- 211 (262)
T ss_pred cCcCCccccChhHh------c---------cCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHHH--------------
Confidence 55678899999998 2 245678999999999999999965 6654322211
Q ss_pred hhhhHHHHHHHHHH-HhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHHhhh
Q 008820 112 LGMYMAWMEKVTYL-LENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELI 166 (552)
Q Consensus 112 ~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~~~~ 166 (552)
...+... ........+..+.+++.+|+..+|++||++.++...+.+++
T Consensus 212 -------~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~ 260 (262)
T cd05058 212 -------TVYLLQGRRLLQPEYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQIF 260 (262)
T ss_pred -------HHHHhcCCCCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHh
Confidence 0000000 00001112335889999999999999999999999887764
No 461
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=99.18 E-value=9.8e-12 Score=117.33 Aligned_cols=93 Identities=17% Similarity=0.241 Sum_probs=63.9
Q ss_pred hccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhh-CC-CchHHHhhhhhhccccCCCchhhh
Q 008820 34 DFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE-QFTKELIDYIRCVSTKASDDNIAC 111 (552)
Q Consensus 34 ~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~llt-g~-pf~~~~~~~~~~~~~~~~~~~~~~ 111 (552)
...+++.|||||++ . ...++.++|+|||||+||||++ |+ ||.......+.
T Consensus 160 ~~~~~~~y~aPE~~------~---------~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~------------- 211 (256)
T cd05114 160 GAKFPVKWSPPEVF------N---------FSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVV------------- 211 (256)
T ss_pred CCCCchhhCChhhc------c---------cCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHH-------------
Confidence 34567789999998 2 2456689999999999999999 89 99664433110
Q ss_pred hhhhHHHHHHHHHH-HhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHH
Q 008820 112 LGMYMAWMEKVTYL-LENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCI 162 (552)
Q Consensus 112 ~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l 162 (552)
..+... ...........+.+++.+|++.+|.+||++.++.+.+
T Consensus 212 --------~~i~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l 255 (256)
T cd05114 212 --------EMISRGFRLYRPKLASMTVYEVMYSCWHEKPEGRPTFAELLRAI 255 (256)
T ss_pred --------HHHHCCCCCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence 000000 0001112334588999999999999999999887653
No 462
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=99.18 E-value=1.4e-11 Score=116.23 Aligned_cols=95 Identities=14% Similarity=0.119 Sum_probs=65.5
Q ss_pred cccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhh-CC-CchHHHhhhhhhccccCCCchhhhhh
Q 008820 36 LESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE-QFTKELIDYIRCVSTKASDDNIACLG 113 (552)
Q Consensus 36 ~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~llt-g~-pf~~~~~~~~~~~~~~~~~~~~~~~~ 113 (552)
.+++.|||||++ . ...++.++|||||||++|||++ |+ ||.......+.
T Consensus 159 ~~~~~y~aPE~~------~---------~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~--------------- 208 (257)
T cd05115 159 KWPLKWYAPECI------N---------FRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVM--------------- 208 (257)
T ss_pred CCCcccCCHHHH------c---------cCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHH---------------
Confidence 346899999998 2 2456789999999999999996 99 99653322110
Q ss_pred hhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHHhh
Q 008820 114 MYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIREL 165 (552)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~~~ 165 (552)
...... ...........++.+++.+|++.+|++||+..++.+.+...
T Consensus 209 --~~~~~~---~~~~~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 209 --SFIEQG---KRLDCPAECPPEMYALMKDCWIYKWEDRPNFAKVEERMRTY 255 (257)
T ss_pred --HHHHCC---CCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence 000000 00011122345689999999999999999999998877653
No 463
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.18 E-value=5.8e-12 Score=113.62 Aligned_cols=111 Identities=18% Similarity=0.137 Sum_probs=77.2
Q ss_pred hhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhhhhhhccccCCCc
Q 008820 29 GLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDYIRCVSTKASDD 107 (552)
Q Consensus 29 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~~~~~~~~~~~~~ 107 (552)
++.+.+-+||-.|||||+..- +-+ ....++.+||+||||||||-||+|+ ||.+.--. -=
T Consensus 240 tP~L~tPvGSAEfMAPEVVd~-fv~---------qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~----------dC 299 (463)
T KOG0607|consen 240 TPELLTPVGSAEFMAPEVVDV-FVD---------QATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGA----------DC 299 (463)
T ss_pred CccccCcccchhhcchhHHhh-hcc---------ccccccccccHHHHHHHHHHHHhCCCCccCccCC----------cC
Confidence 356777899999999999832 221 2356788999999999999999999 99552111 00
Q ss_pred hhhhh--------hhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHH
Q 008820 108 NIACL--------GMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVW 159 (552)
Q Consensus 108 ~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~ 159 (552)
+|..- .....+.+.-.+.|+..|...+.+.++++..+|-.++.+|-.+..+.
T Consensus 300 GWdrGe~Cr~CQ~~LFesIQEGkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vl 359 (463)
T KOG0607|consen 300 GWDRGEVCRVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVL 359 (463)
T ss_pred CccCCCccHHHHHHHHHHHhccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhcc
Confidence 22111 11222333345667777777888899999999999999998766543
No 464
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=99.18 E-value=1.2e-11 Score=117.44 Aligned_cols=93 Identities=17% Similarity=0.262 Sum_probs=63.4
Q ss_pred hhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhhhhhhccccCCCchhhh
Q 008820 33 SDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDYIRCVSTKASDDNIAC 111 (552)
Q Consensus 33 ~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~~~~~~~~~~~~~~~~~ 111 (552)
..+.|++.|+|||++ . ...++.++|+|||||++|+|++|+ ||........
T Consensus 170 ~~~~~~~~y~~pe~~------~---------~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~-------------- 220 (267)
T cd06628 170 PSLQGSVFWMAPEVV------K---------QTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQA-------------- 220 (267)
T ss_pred cccCCCcCccChhHh------c---------cCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHHH--------------
Confidence 346799999999998 2 245678999999999999999999 9965322100
Q ss_pred hhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 112 LGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
...... .............+.+++.+||+.+|.+||+..++.+
T Consensus 221 ---~~~~~~---~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 263 (267)
T cd06628 221 ---IFKIGE---NASPEIPSNISSEAIDFLEKTFEIDHNKRPTAAELLK 263 (267)
T ss_pred ---HHHHhc---cCCCcCCcccCHHHHHHHHHHccCCchhCcCHHHHhh
Confidence 000000 0000111123345889999999999999999877654
No 465
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=99.18 E-value=1.5e-11 Score=116.68 Aligned_cols=94 Identities=21% Similarity=0.295 Sum_probs=65.6
Q ss_pred hhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhhhhhhccccCCCchhh
Q 008820 32 LSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDYIRCVSTKASDDNIA 110 (552)
Q Consensus 32 ~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~~~~~~~~~~~~~~~~ 110 (552)
.....|++.|||||++ . ...++.++|+|||||++|+|++|+ ||.......+.
T Consensus 167 ~~~~~~~~~~~~pE~~------~---------~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~------------ 219 (265)
T cd08217 167 AKTYVGTPYYMSPEQL------N---------HMSYDEKSDIWSLGCLIYELCALSPPFTARNQLQLA------------ 219 (265)
T ss_pred ccccccCCCccChhhh------c---------CCCCCchhHHHHHHHHHHHHHHCCCcccCcCHHHHH------------
Confidence 4557899999999998 2 244678999999999999999999 99764433111
Q ss_pred hhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 111 CLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
+...... ...........+.+++.+||+.+|.+||++.++.+
T Consensus 220 -----~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~ 261 (265)
T cd08217 220 -----SKIKEGK---FRRIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQ 261 (265)
T ss_pred -----HHHhcCC---CCCCccccCHHHHHHHHHHccCCcccCCCHHHHhh
Confidence 0000000 00011112345889999999999999999988765
No 466
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=99.18 E-value=1.4e-11 Score=117.10 Aligned_cols=98 Identities=15% Similarity=0.276 Sum_probs=63.3
Q ss_pred hhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhhhhhhccccCCCchhh
Q 008820 32 LSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDYIRCVSTKASDDNIA 110 (552)
Q Consensus 32 ~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~~~~~~~~~~~~~~~~ 110 (552)
.....|++.|+|||++. + ....++.++|+|||||+||+|++|+ ||.........
T Consensus 166 ~~~~~~~~~~~aPE~~~------~-------~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~------------ 220 (268)
T cd06624 166 TETFTGTLQYMAPEVID------K-------GPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAA------------ 220 (268)
T ss_pred cccCCCCccccChhhhc------c-------ccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhh------------
Confidence 44567999999999982 1 1123568999999999999999999 99542211000
Q ss_pred hhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 111 CLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
.+ ....... ..........++.+++.+||+.+|.+||++.++..
T Consensus 221 ~~--~~~~~~~----~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 264 (268)
T cd06624 221 MF--KVGMFKI----HPEIPESLSAEAKNFILRCFEPDPDKRASAHDLLQ 264 (268)
T ss_pred Hh--hhhhhcc----CCCCCcccCHHHHHHHHHHcCCCchhCCCHHHHHh
Confidence 00 0000000 00011112345889999999999999999987654
No 467
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=99.18 E-value=7.9e-12 Score=121.29 Aligned_cols=98 Identities=16% Similarity=0.162 Sum_probs=66.1
Q ss_pred hccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhhhhhhccccCCCchhhhh
Q 008820 34 DFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDYIRCVSTKASDDNIACL 112 (552)
Q Consensus 34 ~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~~~~~~~~~~~~~~~~~~ 112 (552)
...|++.|+|||++ .....+.++|+|||||+||||++|+ ||.+.....+.
T Consensus 175 ~~~~~~~y~aPE~~---------------~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~-------------- 225 (305)
T cd05609 175 QVCGTPEYIAPEVI---------------LRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELF-------------- 225 (305)
T ss_pred CCccCccccCchhc---------------cCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH--------------
Confidence 46789999999998 2244678999999999999999999 99754333110
Q ss_pred hhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHHh
Q 008820 113 GMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRE 164 (552)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~~ 164 (552)
..........+.. ......++.+++.+||+.+|++||+...+.+.+..
T Consensus 226 ---~~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~ 273 (305)
T cd05609 226 ---GQVISDDIEWPEG-DEALPADAQDLISRLLRQNPLERLGTGGAFEVKQH 273 (305)
T ss_pred ---HHHHhcccCCCCc-cccCCHHHHHHHHHHhccChhhccCccCHHHHHhC
Confidence 0000000000110 01234458999999999999999998766665554
No 468
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=99.18 E-value=1e-11 Score=120.83 Aligned_cols=114 Identities=14% Similarity=0.198 Sum_probs=66.6
Q ss_pred hhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhhhh----hhccccCCCc
Q 008820 33 SDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDYI----RCVSTKASDD 107 (552)
Q Consensus 33 ~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~~~----~~~~~~~~~~ 107 (552)
+...||+.|+|||++ .+ ...++.++|||||||+||||++|+ ||.+.+.... ........+.
T Consensus 184 ~~~~~~~~y~aPE~~------~~--------~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (311)
T cd07866 184 TNLVVTRWYRPPELL------LG--------ERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIFKLCGTPTEE 249 (311)
T ss_pred ccceeccCcCChHHh------hC--------CCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChh
Confidence 456889999999998 22 234678999999999999999999 9965332211 1011111111
Q ss_pred hhhhhhhhHHHH-----HHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 108 NIACLGMYMAWM-----EKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 108 ~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
.|..+....... ...+.............+.+++.+||+.+|.+||++.++..
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~ 307 (311)
T cd07866 250 TWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALE 307 (311)
T ss_pred hchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhc
Confidence 111111000000 00000011111223356889999999999999999876543
No 469
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=99.18 E-value=8.6e-12 Score=118.45 Aligned_cols=94 Identities=14% Similarity=0.181 Sum_probs=62.7
Q ss_pred hccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhhhhhhccccCCCchhhhh
Q 008820 34 DFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDYIRCVSTKASDDNIACL 112 (552)
Q Consensus 34 ~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~~~~~~~~~~~~~~~~~~ 112 (552)
...||+.|||||++ . ...++.++|+|||||++|||++|+ ||.......+.
T Consensus 165 ~~~~~~~y~aPE~~------~---------~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~-------------- 215 (267)
T PHA03390 165 CYDGTLDYFSPEKI------K---------GHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELD-------------- 215 (267)
T ss_pred cCCCCCcccChhhh------c---------CCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhh--------------
Confidence 45799999999998 2 245668999999999999999999 99643221000
Q ss_pred hhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcch-hhHH
Q 008820 113 GMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLL-TNVW 159 (552)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~-~~~~ 159 (552)
...+.... ...........+.+.+++.+||+.+|.+||+. .++.
T Consensus 216 --~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l 260 (267)
T PHA03390 216 --LESLLKRQ-QKKLPFIKNVSKNANDFVQSMLKYNINYRLTNYNEII 260 (267)
T ss_pred --HHHHHHhh-cccCCcccccCHHHHHHHHHHhccChhhCCchHHHHh
Confidence 01111111 11111222345568999999999999999974 5544
No 470
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=99.18 E-value=1.5e-11 Score=116.94 Aligned_cols=94 Identities=16% Similarity=0.204 Sum_probs=64.3
Q ss_pred ccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhh-CC-CchHHHhhhhhhccccCCCchhhhhhh
Q 008820 37 ESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE-QFTKELIDYIRCVSTKASDDNIACLGM 114 (552)
Q Consensus 37 g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~llt-g~-pf~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (552)
+++.|||||++ ....++.++|||||||++|||++ |+ ||.......+.
T Consensus 172 ~~~~y~~PE~~---------------~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~~~---------------- 220 (268)
T cd05063 172 IPIRWTAPEAI---------------AYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHEVM---------------- 220 (268)
T ss_pred cCceecCHHHh---------------hcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHHHH----------------
Confidence 45689999998 22456789999999999999998 99 99653322110
Q ss_pred hHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHHhh
Q 008820 115 YMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIREL 165 (552)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~~~ 165 (552)
..+... ...+........+.+++.+|++.+|++||++.++.+.+.++
T Consensus 221 -~~i~~~---~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 221 -KAINDG---FRLPAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred -HHHhcC---CCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 000000 00001111234588999999999999999999998887664
No 471
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.17 E-value=1.2e-11 Score=112.27 Aligned_cols=95 Identities=22% Similarity=0.330 Sum_probs=64.7
Q ss_pred hhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhhhhhhccccCCCchhh
Q 008820 32 LSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDYIRCVSTKASDDNIA 110 (552)
Q Consensus 32 ~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~~~~~~~~~~~~~~~~ 110 (552)
+|.|+|||.|+|||++ +| ..++...|.|+|||++|||+.|+ ||+---.. +|+.-.
T Consensus 408 tstfcgtpnyiapeil------rg---------eeygfsvdwwalgvlmfemmagrspfdivgm~---------n~d~nt 463 (593)
T KOG0695|consen 408 TSTFCGTPNYIAPEIL------RG---------EEYGFSVDWWALGVLMFEMMAGRSPFDIVGMD---------NPDMNT 463 (593)
T ss_pred cccccCCCcccchhhh------cc---------cccCceehHHHHHHHHHHHHcCCCCcceecCC---------Ccccch
Confidence 7999999999999999 55 66778999999999999999999 99642111 110000
Q ss_pred hhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcc
Q 008820 111 CLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPL 154 (552)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~ 154 (552)
.-...|.+.++...+|.+ ..+....++..-|.++|.+|-.
T Consensus 464 edylfqvilekqiriprs----lsvkas~vlkgflnkdp~erlg 503 (593)
T KOG0695|consen 464 EDYLFQVILEKQIRIPRS----LSVKASHVLKGFLNKDPKERLG 503 (593)
T ss_pred hHHHHHHHhhhcccccce----eehhhHHHHHHhhcCCcHHhcC
Confidence 111234444433333322 3445667888899999999754
No 472
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=99.17 E-value=5.3e-12 Score=119.60 Aligned_cols=100 Identities=16% Similarity=0.140 Sum_probs=63.1
Q ss_pred hhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhhhh-hhccccCCCchh
Q 008820 32 LSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDYI-RCVSTKASDDNI 109 (552)
Q Consensus 32 ~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~~~-~~~~~~~~~~~~ 109 (552)
...+.|++.|+|||++ .+ ......+.++|+|||||+||+|+||+ ||........ ..+......
T Consensus 158 ~~~~~~~~~y~~Pe~~------~~------~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~--- 222 (262)
T cd06613 158 RKSFIGTPYWMAPEVA------AV------ERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLISKSNFP--- 222 (262)
T ss_pred cccccCCccccCchhh------cc------cccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCC---
Confidence 3456899999999998 22 00125678999999999999999999 9965332210 000000000
Q ss_pred hhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 110 ACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
+... . .......++.+++.+|+..+|..||+..++..
T Consensus 223 -----~~~~-~--------~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 259 (262)
T cd06613 223 -----PPKL-K--------DKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQ 259 (262)
T ss_pred -----Cccc-c--------chhhhhHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 0000 0 00011234889999999999999999877654
No 473
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=99.17 E-value=1.5e-11 Score=128.50 Aligned_cols=100 Identities=18% Similarity=0.165 Sum_probs=68.8
Q ss_pred hhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhhhhhhccccCCCchh
Q 008820 31 FLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDYIRCVSTKASDDNI 109 (552)
Q Consensus 31 ~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~~~~~~~~~~~~~~~ 109 (552)
-.+..+|||.|+|||++..... ..+.+++.||.|||||++||||.|. ||.++++.
T Consensus 232 ~s~~aVGTPDYISPEvLqs~~~----------~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslv-------------- 287 (1317)
T KOG0612|consen 232 RSSVAVGTPDYISPEVLQSQGD----------GKGEYGRECDWWSLGVFMYEMLYGETPFYADSLV-------------- 287 (1317)
T ss_pred EeccccCCCCccCHHHHHhhcC----------CccccCCccchhhhHHHHHHHHcCCCcchHHHHH--------------
Confidence 3677899999999999954322 2468899999999999999999999 99888766
Q ss_pred hhhhhhHHHHHH--HHHHHhhhhcCccccHHHHHHhhcccCCCCCcc---hhhHHH
Q 008820 110 ACLGMYMAWMEK--VTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPL---LTNVWK 160 (552)
Q Consensus 110 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~---~~~~~~ 160 (552)
.+|..+... ...+| .....+.+.+++|.+++. +|+.|-. ..++..
T Consensus 288 ---eTY~KIm~hk~~l~FP--~~~~VSeeakdLI~~ll~-~~e~RLgrngiedik~ 337 (1317)
T KOG0612|consen 288 ---ETYGKIMNHKESLSFP--DETDVSEEAKDLIEALLC-DREVRLGRNGIEDIKN 337 (1317)
T ss_pred ---HHHHHHhchhhhcCCC--cccccCHHHHHHHHHHhc-ChhhhcccccHHHHHh
Confidence 223322222 12222 112245568899988776 6666655 555544
No 474
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=99.17 E-value=1.2e-11 Score=120.72 Aligned_cols=92 Identities=21% Similarity=0.253 Sum_probs=61.8
Q ss_pred hhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhhhhhhccccCCCchhhh
Q 008820 33 SDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDYIRCVSTKASDDNIAC 111 (552)
Q Consensus 33 ~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~~~~~~~~~~~~~~~~~ 111 (552)
..+.||+.|||||++ .+ ..++.++|||||||++|+|++|+ ||........
T Consensus 190 ~~~~g~~~y~aPE~~------~~---------~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~-------------- 240 (316)
T cd05574 190 NSFVGTEEYIAPEVI------SG---------DGHGSAVDWWTLGILLYEMLYGTTPFKGSNRDET-------------- 240 (316)
T ss_pred CCCcCccCCcCHHHH------cC---------CCCCchHHHHHHHHHHHHHhhCCCCCCCCchHHH--------------
Confidence 357899999999999 22 45678999999999999999999 9965432210
Q ss_pred hhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhH
Q 008820 112 LGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNV 158 (552)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~ 158 (552)
+......... ..........+.+++.+||+.+|++||+....
T Consensus 241 ---~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~ 282 (316)
T cd05574 241 ---FSNILKKEVT--FPGSPPVSSSARDLIRKLLVKDPSKRLGSKRG 282 (316)
T ss_pred ---HHHHhcCCcc--CCCccccCHHHHHHHHHHccCCHhHCCCchhh
Confidence 0000000000 00001123459999999999999999994433
No 475
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=99.17 E-value=1.5e-11 Score=115.61 Aligned_cols=91 Identities=19% Similarity=0.268 Sum_probs=62.6
Q ss_pred ccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhh-CC-CchHHHhhhhhhccccCCCchhhhhhh
Q 008820 37 ESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE-QFTKELIDYIRCVSTKASDDNIACLGM 114 (552)
Q Consensus 37 g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~llt-g~-pf~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (552)
++..|+|||++ . ...++.++|+|||||++|||+| |. ||.......+.
T Consensus 157 ~~~~y~~PE~~------~---------~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~---------------- 205 (251)
T cd05041 157 IPIKWTAPEAL------N---------YGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTR---------------- 205 (251)
T ss_pred ceeccCChHhh------c---------cCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHH----------------
Confidence 36679999998 2 2456789999999999999999 77 98653322110
Q ss_pred hHHHHHHHHHH-HhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHH
Q 008820 115 YMAWMEKVTYL-LENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIR 163 (552)
Q Consensus 115 ~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~ 163 (552)
...... ...........+.+++.+|+..+|.+||++.++.+.+.
T Consensus 206 -----~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~~l~ 250 (251)
T cd05041 206 -----ERIESGYRMPAPQLCPEEIYRLMLQCWAYDPENRPSFSEIYNELQ 250 (251)
T ss_pred -----HHHhcCCCCCCCccCCHHHHHHHHHHhccChhhCcCHHHHHHHhh
Confidence 000000 00011123345899999999999999999999887653
No 476
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.17 E-value=1.3e-11 Score=118.60 Aligned_cols=102 Identities=18% Similarity=0.218 Sum_probs=64.2
Q ss_pred hhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhhhhhhccccCCCchhhh
Q 008820 33 SDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDYIRCVSTKASDDNIAC 111 (552)
Q Consensus 33 ~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~~~~~~~~~~~~~~~~~ 111 (552)
....|++.|+|||++...... ....++.++|+|||||++|+|++|+ ||........
T Consensus 159 ~~~~~~~~y~aPE~~~~~~~~---------~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~-------------- 215 (286)
T cd06622 159 KTNIGCQSYMAPERIKSGGPN---------QNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANI-------------- 215 (286)
T ss_pred ccCCCccCccCcchhcCCCCC---------ccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhH--------------
Confidence 345689999999998211100 1234567999999999999999999 9965332210
Q ss_pred hhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 112 LGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
...........+.........++.+++.+||+.+|.+||+..++..
T Consensus 216 ---~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 261 (286)
T cd06622 216 ---FAQLSAIVDGDPPTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLE 261 (286)
T ss_pred ---HHHHHHHhhcCCCCCCcccCHHHHHHHHHHcccCcccCCCHHHHhc
Confidence 0000000000011111123345889999999999999999887665
No 477
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=99.17 E-value=1e-11 Score=117.58 Aligned_cols=98 Identities=18% Similarity=0.231 Sum_probs=64.9
Q ss_pred hhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhhhhhhccccCCCchhhh
Q 008820 33 SDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDYIRCVSTKASDDNIAC 111 (552)
Q Consensus 33 ~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~~~~~~~~~~~~~~~~~ 111 (552)
..+.|++.|+|||++ .+ ..++.++||||||++||+|++|. ||.......+.
T Consensus 151 ~~~~~~~~y~~pe~~------~~---------~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~------------- 202 (260)
T cd05611 151 KKFVGTPDYLAPETI------LG---------VGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVF------------- 202 (260)
T ss_pred ccCCCCcCccChhhh------cC---------CCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHH-------------
Confidence 356799999999998 22 33578999999999999999999 99654333110
Q ss_pred hhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHH
Q 008820 112 LGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCI 162 (552)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l 162 (552)
..........+..........+.+++.+||+.+|+.||++..+.+.+
T Consensus 203 ----~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l 249 (260)
T cd05611 203 ----DNILSRRINWPEEVKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIK 249 (260)
T ss_pred ----HHHHhcccCCCCcccccCCHHHHHHHHHHccCCHHHccCCCcHHHHH
Confidence 00000000001111112344589999999999999999876555543
No 478
>KOG2321 consensus WD40 repeat protein [General function prediction only]
Probab=99.17 E-value=5.8e-09 Score=100.89 Aligned_cols=187 Identities=17% Similarity=0.255 Sum_probs=126.5
Q ss_pred EEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCceeE
Q 008820 297 AVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSC 376 (552)
Q Consensus 297 ~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~ 376 (552)
+++++.....+ +.++....|+-++++.+....++..-... ..+..+++-..+|++|+.+|.|..||.++.+.+.
T Consensus 138 Dm~y~~~scDl-y~~gsg~evYRlNLEqGrfL~P~~~~~~~-----lN~v~in~~hgLla~Gt~~g~VEfwDpR~ksrv~ 211 (703)
T KOG2321|consen 138 DMKYHKPSCDL-YLVGSGSEVYRLNLEQGRFLNPFETDSGE-----LNVVSINEEHGLLACGTEDGVVEFWDPRDKSRVG 211 (703)
T ss_pred cccccCCCccE-EEeecCcceEEEEcccccccccccccccc-----ceeeeecCccceEEecccCceEEEecchhhhhhe
Confidence 44444333323 44555567888888877666665543322 1244566666799999999999999999877666
Q ss_pred Eec------CCCC-----CeEEEEEeC-C-EEEEEeCCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCC--CCEEEE
Q 008820 377 TMS------GHKS-----AVSTLAVCN-G-VLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAV--QHTLVV 441 (552)
Q Consensus 377 ~~~------~h~~-----~v~~l~~~~-~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~--~~~l~~ 441 (552)
++. .|.+ .|+++.|++ + .+++|..+|.+.|||+++.+++..-.+...-.+.. +.|.+. ++.+++
T Consensus 212 ~l~~~~~v~s~pg~~~~~svTal~F~d~gL~~aVGts~G~v~iyDLRa~~pl~~kdh~~e~pi~~-l~~~~~~~q~~v~S 290 (703)
T KOG2321|consen 212 TLDAASSVNSHPGGDAAPSVTALKFRDDGLHVAVGTSTGSVLIYDLRASKPLLVKDHGYELPIKK-LDWQDTDQQNKVVS 290 (703)
T ss_pred eeecccccCCCccccccCcceEEEecCCceeEEeeccCCcEEEEEcccCCceeecccCCccceee-ecccccCCCceEEe
Confidence 553 2333 499999995 5 89999999999999999999887666554444444 455443 344554
Q ss_pred EECCCcEEEEe--CCcceeeeecccceEEEEE--ecCCEEEEEeCCCeEEEEecC
Q 008820 442 SHESGSIKVWR--NDKFMKSMQTHKGSVFAVF--LEGKWLFTGGWDKTVSVQELA 492 (552)
Q Consensus 442 g~~dg~i~iwd--~~~~~~~~~~h~~~v~~v~--~~~~~l~sgs~dg~i~iwd~~ 492 (552)
.....++||| .++....+... ..+..++ +++.+++++-.++.+..|=+.
T Consensus 291 -~Dk~~~kiWd~~~Gk~~asiEpt-~~lND~C~~p~sGm~f~Ane~~~m~~yyiP 343 (703)
T KOG2321|consen 291 -MDKRILKIWDECTGKPMASIEPT-SDLNDFCFVPGSGMFFTANESSKMHTYYIP 343 (703)
T ss_pred -cchHHhhhcccccCCceeecccc-CCcCceeeecCCceEEEecCCCcceeEEcc
Confidence 4566899998 45555555432 3355555 488899999988888777554
No 479
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=99.17 E-value=2.1e-11 Score=120.29 Aligned_cols=100 Identities=17% Similarity=0.223 Sum_probs=67.5
Q ss_pred hccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhh-CC-CchHHHhhhhhhccccCCCchhhh
Q 008820 34 DFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE-QFTKELIDYIRCVSTKASDDNIAC 111 (552)
Q Consensus 34 ~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~llt-g~-pf~~~~~~~~~~~~~~~~~~~~~~ 111 (552)
...|++.|||||++ . ...++.++|||||||+||+|++ |. ||.........
T Consensus 240 ~~~~~~~y~aPE~~------~---------~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~------------- 291 (343)
T cd05103 240 DARLPLKWMAPETI------F---------DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF------------- 291 (343)
T ss_pred CCCCCcceECcHHh------c---------CCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHH-------------
Confidence 45567899999998 2 2456789999999999999997 88 99653211000
Q ss_pred hhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHHhhhc
Q 008820 112 LGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELII 167 (552)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~~~~~ 167 (552)
........ .........+++.+++.+|++.+|.+||++.++.+.+..+.+
T Consensus 292 ---~~~~~~~~---~~~~~~~~~~~~~~~~~~cl~~~p~~Rps~~eil~~l~~~~~ 341 (343)
T cd05103 292 ---CRRLKEGT---RMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 341 (343)
T ss_pred ---HHHHhccC---CCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 00000000 000001123358899999999999999999999999888763
No 480
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=99.17 E-value=1.7e-11 Score=117.55 Aligned_cols=110 Identities=15% Similarity=0.231 Sum_probs=67.2
Q ss_pred ccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhhhhhhccccCCCchhhhhh
Q 008820 35 FLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDYIRCVSTKASDDNIACLG 113 (552)
Q Consensus 35 ~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~~~~~~~~~~~~~~~~~~~ 113 (552)
..+++.|||||++ . ...+++++|||||||++|||+||. ||..........+..... .+.
T Consensus 170 ~~~~~~~~~PE~~------~---------~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~--~~~--- 229 (283)
T cd05080 170 GDSPVFWYAVECL------K---------ENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQG--QMT--- 229 (283)
T ss_pred CCCCceeeCHhHh------c---------ccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhccccc--ccc---
Confidence 3467789999998 2 245678999999999999999999 985432110000000000 000
Q ss_pred hhHHHHHHHHHHH-hhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHHhh
Q 008820 114 MYMAWMEKVTYLL-ENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIREL 165 (552)
Q Consensus 114 ~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~~~ 165 (552)
...+........ .+.....+.++.+++.+|++.+|++||++.++.+.+..+
T Consensus 230 -~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~ 281 (283)
T cd05080 230 -VVRLIELLERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEM 281 (283)
T ss_pred -hhhhhhhhhcCCCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHh
Confidence 000000000000 001122345699999999999999999999999887764
No 481
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=99.16 E-value=1.9e-11 Score=118.45 Aligned_cols=118 Identities=14% Similarity=0.145 Sum_probs=75.9
Q ss_pred hhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhh-CC-Cc
Q 008820 14 AKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE-QF 89 (552)
Q Consensus 14 ~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~llt-g~-pf 89 (552)
+|+. |+++.+.............+++.|||||++ . ...++.++|||||||++|||++ |+ ||
T Consensus 148 ~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~------~---------~~~~~~~~DiwslG~~l~el~t~g~~p~ 212 (303)
T cd05110 148 VKITDFGLARLLEGDEKEYNADGGKMPIKWMALECI------H---------YRKFTHQSDVWSYGVTIWELMTFGGKPY 212 (303)
T ss_pred eEEccccccccccCcccccccCCCccccccCCHHHh------c---------cCCCChHHHHHHHHHHHHHHHhCCCCCC
Confidence 4555 556555443322223345568899999998 2 2456789999999999999997 88 99
Q ss_pred hHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHHhhh
Q 008820 90 TKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELI 166 (552)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~~~~ 166 (552)
.......+. .+...... ..........+.+++.+|+..+|++||++.++.+.+..+.
T Consensus 213 ~~~~~~~~~------------------~~~~~~~~--~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~ 269 (303)
T cd05110 213 DGIPTREIP------------------DLLEKGER--LPQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMA 269 (303)
T ss_pred CCCCHHHHH------------------HHHHCCCC--CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 653222110 00000000 0001122345889999999999999999999988877754
No 482
>KOG0974 consensus WD-repeat protein WDR6, WD repeat superfamily [General function prediction only]
Probab=99.16 E-value=9.1e-10 Score=113.59 Aligned_cols=187 Identities=17% Similarity=0.230 Sum_probs=135.6
Q ss_pred CCCEEEEEcCCCcEEEEeCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCceeEEecCCCC
Q 008820 304 DQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKS 383 (552)
Q Consensus 304 ~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~ 383 (552)
.+..++.++.+..+.+||.........+..-... ......+..++++.-++++|+.-+.|.+|+....+....+.+|.+
T Consensus 98 e~k~i~l~~~~ns~~i~d~~~~~~~~~i~~~er~-~l~~~~~~g~s~~~~~i~~gsv~~~iivW~~~~dn~p~~l~GHeG 176 (967)
T KOG0974|consen 98 ENKKIALVTSRNSLLIRDSKNSSVLSKIQSDERC-TLYSSLIIGDSAEELYIASGSVFGEIIVWKPHEDNKPIRLKGHEG 176 (967)
T ss_pred hcceEEEEEcCceEEEEecccCceehhcCCCceE-EEEeEEEEeccCcEEEEEeccccccEEEEeccccCCcceecccCC
Confidence 3446788888899999998754322222111100 001122334455555999999999999999974444446899999
Q ss_pred CeEEEEEe--CCEEEEEeCCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEECCCcEEEEeC-Ccceeee
Q 008820 384 AVSTLAVC--NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRN-DKFMKSM 460 (552)
Q Consensus 384 ~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~-~~~~~~~ 460 (552)
.|.++.++ +.++++.|+|.++|+|++.+.+........|...+.. +++.|+ .+++++.|.+.++|+. .+....+
T Consensus 177 ~iF~i~~s~dg~~i~s~SdDRsiRlW~i~s~~~~~~~~fgHsaRvw~-~~~~~n--~i~t~gedctcrvW~~~~~~l~~y 253 (967)
T KOG0974|consen 177 SIFSIVTSLDGRYIASVSDDRSIRLWPIDSREVLGCTGFGHSARVWA-CCFLPN--RIITVGEDCTCRVWGVNGTQLEVY 253 (967)
T ss_pred ceEEEEEccCCcEEEEEecCcceeeeecccccccCcccccccceeEE-EEeccc--eeEEeccceEEEEEecccceehhh
Confidence 99999998 4499999999999999999988776444444566666 467776 8999999999999973 3455577
Q ss_pred ecccc-eEEEEEe--cCCEEEEEeCCCeEEEEecCCC
Q 008820 461 QTHKG-SVFAVFL--EGKWLFTGGWDKTVSVQELAGD 494 (552)
Q Consensus 461 ~~h~~-~v~~v~~--~~~~l~sgs~dg~i~iwd~~~~ 494 (552)
.+|.. .+..+.. +...++|++.|+.+++||+.+.
T Consensus 254 ~~h~g~~iw~~~~~~~~~~~vT~g~Ds~lk~~~l~~r 290 (967)
T KOG0974|consen 254 DEHSGKGIWKIAVPIGVIIKVTGGNDSTLKLWDLNGR 290 (967)
T ss_pred hhhhhcceeEEEEcCCceEEEeeccCcchhhhhhhcc
Confidence 77765 4555554 6778899999999999998643
No 483
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.16 E-value=4.6e-12 Score=120.39 Aligned_cols=99 Identities=14% Similarity=0.100 Sum_probs=62.8
Q ss_pred hhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhh-hhhhccccCCCchhh
Q 008820 33 SDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELID-YIRCVSTKASDDNIA 110 (552)
Q Consensus 33 ~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~-~~~~~~~~~~~~~~~ 110 (552)
....|++.|||||++... .....+.++|+|||||++|||++|+ ||...... ....+.... +.
T Consensus 164 ~~~~~~~~y~~PE~~~~~------------~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~~~~~~----~~ 227 (267)
T cd06646 164 KSFIGTPYWMAPEVAAVE------------KNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSN----FQ 227 (267)
T ss_pred CccccCccccCHhHcccc------------cCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhheeeecCC----CC
Confidence 456799999999998211 1233567899999999999999999 98543211 010000000 00
Q ss_pred hhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 111 CLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
+.. . .........+.+++.+||+.+|++||++.++.+
T Consensus 228 ----~~~--------~-~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 264 (267)
T cd06646 228 ----PPK--------L-KDKTKWSSTFHNFVKISLTKNPKKRPTAERLLT 264 (267)
T ss_pred ----CCC--------C-ccccccCHHHHHHHHHHhhCChhhCcCHHHHhc
Confidence 000 0 000112345889999999999999999887654
No 484
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=99.16 E-value=2.7e-11 Score=118.19 Aligned_cols=45 Identities=27% Similarity=0.473 Sum_probs=37.0
Q ss_pred hhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchH
Q 008820 33 SDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTK 91 (552)
Q Consensus 33 ~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~ 91 (552)
....||+.|||||++ .| ...++.++|||||||+||+|++|+ ||..
T Consensus 173 ~~~~~~~~y~aPE~~------~~--------~~~~~~~~Dv~slG~~l~~l~~~~~~~~~ 218 (316)
T cd07842 173 DPVVVTIWYRAPELL------LG--------ARHYTKAIDIWAIGCIFAELLTLEPIFKG 218 (316)
T ss_pred CCccccccccCHHHH------hC--------CCCCCcHHHHHHHHHHHHHHHhcCCCCcC
Confidence 456789999999998 22 133568999999999999999999 9964
No 485
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=99.16 E-value=1.8e-08 Score=98.99 Aligned_cols=268 Identities=13% Similarity=0.055 Sum_probs=153.9
Q ss_pred CEE-EEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCccccccccCCCce
Q 008820 263 GFL-FSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWR 341 (552)
Q Consensus 263 ~~l-~s~s~dg~I~iwd~~~~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~ 341 (552)
+++ ++-..++.|.+.|..+.+.+.++......-..+.|+|++. ++++++.||.|.++|+.+.+....++.-..
T Consensus 6 ~l~~V~~~~~~~v~viD~~t~~~~~~i~~~~~~h~~~~~s~Dgr-~~yv~~rdg~vsviD~~~~~~v~~i~~G~~----- 79 (369)
T PF02239_consen 6 NLFYVVERGSGSVAVIDGATNKVVARIPTGGAPHAGLKFSPDGR-YLYVANRDGTVSVIDLATGKVVATIKVGGN----- 79 (369)
T ss_dssp GEEEEEEGGGTEEEEEETTT-SEEEEEE-STTEEEEEE-TT-SS-EEEEEETTSEEEEEETTSSSEEEEEE-SSE-----
T ss_pred cEEEEEecCCCEEEEEECCCCeEEEEEcCCCCceeEEEecCCCC-EEEEEcCCCeEEEEECCcccEEEEEecCCC-----
Confidence 444 4556789999999999999999986554445567888666 556667899999999998764444433211
Q ss_pred eeeEEEEeeCCCEEEEee-CCCcEEEEECCCCceeEEecCC-------CCCeEEEEEe--CC-EEEEEeCCCcEEEEECC
Q 008820 342 YSGIHALTTSGRYLYTGS-GDRTIKAWSLLDGTLSCTMSGH-------KSAVSTLAVC--NG-VLYSGSRDGTIRLWSLS 410 (552)
Q Consensus 342 ~~~~~~~~~~~~~l~sgs-~dg~i~iwd~~~~~~~~~~~~h-------~~~v~~l~~~--~~-~l~s~~~dg~i~iwd~~ 410 (552)
..-.+++++|++++++. .++.+.++|.++.++++.+... ...+.++..+ .. ++++--..+.|-+.|..
T Consensus 80 -~~~i~~s~DG~~~~v~n~~~~~v~v~D~~tle~v~~I~~~~~~~~~~~~Rv~aIv~s~~~~~fVv~lkd~~~I~vVdy~ 158 (369)
T PF02239_consen 80 -PRGIAVSPDGKYVYVANYEPGTVSVIDAETLEPVKTIPTGGMPVDGPESRVAAIVASPGRPEFVVNLKDTGEIWVVDYS 158 (369)
T ss_dssp -EEEEEE--TTTEEEEEEEETTEEEEEETTT--EEEEEE--EE-TTTS---EEEEEE-SSSSEEEEEETTTTEEEEEETT
T ss_pred -cceEEEcCCCCEEEEEecCCCceeEeccccccceeecccccccccccCCCceeEEecCCCCEEEEEEccCCeEEEEEec
Confidence 12357889999877664 6899999999999999887532 3456677666 23 44444555889888987
Q ss_pred CCceeEEEecCCCCceEEEEEEcCCCCEEEEE-ECCCcEEEEeCCccee--ee----ecccceEE-----------EEEe
Q 008820 411 DHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVS-HESGSIKVWRNDKFMK--SM----QTHKGSVF-----------AVFL 472 (552)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g-~~dg~i~iwd~~~~~~--~~----~~h~~~v~-----------~v~~ 472 (552)
..+.+..-.......... ..++|++++++++ ..++.|-++|..+... .+ ..|..+.. ...-
T Consensus 159 d~~~~~~~~i~~g~~~~D-~~~dpdgry~~va~~~sn~i~viD~~~~k~v~~i~~g~~p~~~~~~~~php~~g~vw~~~~ 237 (369)
T PF02239_consen 159 DPKNLKVTTIKVGRFPHD-GGFDPDGRYFLVAANGSNKIAVIDTKTGKLVALIDTGKKPHPGPGANFPHPGFGPVWATSG 237 (369)
T ss_dssp TSSCEEEEEEE--TTEEE-EEE-TTSSEEEEEEGGGTEEEEEETTTTEEEEEEE-SSSBEETTEEEEEETTTEEEEEEEB
T ss_pred cccccceeeecccccccc-cccCcccceeeecccccceeEEEeeccceEEEEeeccccccccccccccCCCcceEEeecc
Confidence 765443322222222333 6899999987765 4567888999664322 11 12333332 2222
Q ss_pred cCCEEEEEeCCCeEEEEecCCCeeeeeeccCCCcccCcceEEEEEeCC--eEEEE----eCCCeEEEEEecCCcceeEE
Q 008820 473 EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQG--KLFVG----CADRTVKIALCNRQIPEIFS 545 (552)
Q Consensus 473 ~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~--~l~s~----s~Dg~v~iw~~~~~~~~~~~ 545 (552)
.+...++.-....+.+||..+.+........+ .. .-+..+|+ ++++. ...+.|.++|.. +.+.+.+
T Consensus 238 ~~~~~~~~ig~~~v~v~d~~~wkvv~~I~~~G-----~g-lFi~thP~s~~vwvd~~~~~~~~~v~viD~~-tl~~~~~ 309 (369)
T PF02239_consen 238 LGYFAIPLIGTDPVSVHDDYAWKVVKTIPTQG-----GG-LFIKTHPDSRYVWVDTFLNPDADTVQVIDKK-TLKVVKT 309 (369)
T ss_dssp SSSSEEEEEE--TTT-STTTBTSEEEEEE-SS-----SS---EE--TT-SEEEEE-TT-SSHT-EEEEECC-GTEEEE-
T ss_pred ccceecccccCCccccchhhcCeEEEEEECCC-----Cc-ceeecCCCCccEEeeccCCCCCceEEEEECc-CcceeEE
Confidence 33333333333456678888777766655432 22 34455653 36665 456899999987 3333333
No 486
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A ....
Probab=99.16 E-value=4.9e-08 Score=90.91 Aligned_cols=219 Identities=13% Similarity=0.097 Sum_probs=143.4
Q ss_pred CCCcEEEEeCCCCeEEEEEeCC--CCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCccccccccCCCceeeeEEE
Q 008820 270 FDKSIHVWSLKDFSHVHTFKGH--DHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHA 347 (552)
Q Consensus 270 ~dg~I~iwd~~~~~~~~~~~~h--~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (552)
.+|+|..||..+|+.+....-- .....+.. .++++ .+++++.++.+..||..+++............. .
T Consensus 1 ~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~-~~~~~-~v~~~~~~~~l~~~d~~tG~~~W~~~~~~~~~~-------~ 71 (238)
T PF13360_consen 1 DDGTLSALDPRTGKELWSYDLGPGIGGPVATA-VPDGG-RVYVASGDGNLYALDAKTGKVLWRFDLPGPISG-------A 71 (238)
T ss_dssp -TSEEEEEETTTTEEEEEEECSSSCSSEEETE-EEETT-EEEEEETTSEEEEEETTTSEEEEEEECSSCGGS-------G
T ss_pred CCCEEEEEECCCCCEEEEEECCCCCCCccceE-EEeCC-EEEEEcCCCEEEEEECCCCCEEEEeeccccccc-------e
Confidence 3789999999999999988641 12222112 22244 556668999999999988765444333111111 0
Q ss_pred EeeCCCEEEEeeCCCcEEEEECCCCceeEEe-cCCC-----CCeEEEEEeCCEEEEEeCCCcEEEEECCCCceeEEEecC
Q 008820 348 LTTSGRYLYTGSGDRTIKAWSLLDGTLSCTM-SGHK-----SAVSTLAVCNGVLYSGSRDGTIRLWSLSDHSLLTVLEED 421 (552)
Q Consensus 348 ~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~-~~h~-----~~v~~l~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~ 421 (552)
....+..+++++.++.++.+|..+|+.++.. .... .......+.++.++.+..++.|..+|+++|+.+......
T Consensus 72 ~~~~~~~v~v~~~~~~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tG~~~w~~~~~ 151 (238)
T PF13360_consen 72 PVVDGGRVYVGTSDGSLYALDAKTGKVLWSIYLTSSPPAGVRSSSSPAVDGDRLYVGTSSGKLVALDPKTGKLLWKYPVG 151 (238)
T ss_dssp EEEETTEEEEEETTSEEEEEETTTSCEEEEEEE-SSCTCSTB--SEEEEETTEEEEEETCSEEEEEETTTTEEEEEEESS
T ss_pred eeecccccccccceeeeEecccCCcceeeeeccccccccccccccCceEecCEEEEEeccCcEEEEecCCCcEEEEeecC
Confidence 2335567777778899999999999999984 3221 112334445789999999999999999999999888764
Q ss_pred CCCce---------EEEEEEcCCCCEEEEEECCCcEEEEeCCcceeeeecccceEEE-EEecCCEEEEEeCCCeEEEEec
Q 008820 422 SSGAV---------SSVLSLTAVQHTLVVSHESGSIKVWRNDKFMKSMQTHKGSVFA-VFLEGKWLFTGGWDKTVSVQEL 491 (552)
Q Consensus 422 ~~~~~---------~~~~~~s~~~~~l~~g~~dg~i~iwd~~~~~~~~~~h~~~v~~-v~~~~~~l~sgs~dg~i~iwd~ 491 (552)
..... ... ....++ .++.++.++.+..+|..+....+......+.. ...++..|+.++.++.|..||+
T Consensus 152 ~~~~~~~~~~~~~~~~~-~~~~~~-~v~~~~~~g~~~~~d~~tg~~~w~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~d~ 229 (238)
T PF13360_consen 152 EPRGSSPISSFSDINGS-PVISDG-RVYVSSGDGRVVAVDLATGEKLWSKPISGIYSLPSVDGGTLYVTSSDGRLYALDL 229 (238)
T ss_dssp TT-SS--EEEETTEEEE-EECCTT-EEEEECCTSSEEEEETTTTEEEEEECSS-ECECEECCCTEEEEEETTTEEEEEET
T ss_pred CCCCCcceeeecccccc-eEEECC-EEEEEcCCCeEEEEECCCCCEEEEecCCCccCCceeeCCEEEEEeCCCEEEEEEC
Confidence 32211 121 222234 77777778764444876554334333333444 5568888998889999999999
Q ss_pred CCCeeeee
Q 008820 492 AGDEFEED 499 (552)
Q Consensus 492 ~~~~~~~~ 499 (552)
++++....
T Consensus 230 ~tG~~~W~ 237 (238)
T PF13360_consen 230 KTGKVVWQ 237 (238)
T ss_dssp TTTEEEEE
T ss_pred CCCCEEeE
Confidence 99977653
No 487
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=99.16 E-value=1.9e-11 Score=115.33 Aligned_cols=94 Identities=20% Similarity=0.317 Sum_probs=65.3
Q ss_pred hhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhhhhhhccccCCCchhh
Q 008820 32 LSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDYIRCVSTKASDDNIA 110 (552)
Q Consensus 32 ~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~~~~~~~~~~~~~~~~ 110 (552)
.....||+.|+|||++ .+ ...+.++|+|||||++|||++|+ ||.......+.
T Consensus 158 ~~~~~~~~~y~ape~~------~~---------~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~------------ 210 (256)
T cd08221 158 AETVVGTPYYMSPELC------QG---------VKYNFKSDIWALGCVLYELLTLKRTFDATNPLNLV------------ 210 (256)
T ss_pred ccccCCCccccCHhhc------CC---------CCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHHHH------------
Confidence 4567899999999998 22 34568999999999999999999 99764433110
Q ss_pred hhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 111 CLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
..... .............+.+++.+||+.+|.+||++.++.+
T Consensus 211 -----~~~~~---~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~ 252 (256)
T cd08221 211 -----VKIVQ---GNYTPVVSVYSSELISLVHSLLQQDPEKRPTADEVLD 252 (256)
T ss_pred -----HHHHc---CCCCCCccccCHHHHHHHHHHcccCcccCCCHHHHhh
Confidence 00000 0000111123345889999999999999999887665
No 488
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=99.16 E-value=1.6e-11 Score=118.22 Aligned_cols=97 Identities=14% Similarity=0.112 Sum_probs=64.5
Q ss_pred cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhhh
Q 008820 18 CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDY 96 (552)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~~ 96 (552)
|+++.+... .....||+.|+|||++ . ....+.++|+|||||++|+|++|+ ||.......
T Consensus 146 g~~~~~~~~-----~~~~~~~~~y~aPE~~------~---------~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~ 205 (290)
T cd05580 146 GFAKRVKGR-----TYTLCGTPEYLAPEII------L---------SKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQ 205 (290)
T ss_pred CCccccCCC-----CCCCCCCccccChhhh------c---------CCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 445544433 3456899999999998 2 245568999999999999999999 996543221
Q ss_pred hhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcch
Q 008820 97 IRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLL 155 (552)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~ 155 (552)
+. +..... ...........+.+++.+||+.+|.+|++.
T Consensus 206 ~~-----------------~~~~~~----~~~~~~~~~~~l~~li~~~l~~~p~~R~~~ 243 (290)
T cd05580 206 IY-----------------EKILEG----KVRFPSFFSPDAKDLIRNLLQVDLTKRLGN 243 (290)
T ss_pred HH-----------------HHHhcC----CccCCccCCHHHHHHHHHHccCCHHHccCc
Confidence 10 000000 001111223458899999999999999853
No 489
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=99.16 E-value=2.1e-11 Score=115.02 Aligned_cols=90 Identities=16% Similarity=0.230 Sum_probs=61.9
Q ss_pred ccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhh-CC-CchHHHhhhhhhccccCCCchhhhhhh
Q 008820 37 ESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE-QFTKELIDYIRCVSTKASDDNIACLGM 114 (552)
Q Consensus 37 g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~llt-g~-pf~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (552)
++..|+|||++ . ...++.++|+|||||+||||++ |+ ||.......+.
T Consensus 163 ~~~~y~~Pe~~------~---------~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~---------------- 211 (256)
T cd05059 163 FPVKWAPPEVF------D---------YSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVV---------------- 211 (256)
T ss_pred CCccccCHHHh------c---------cCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHH----------------
Confidence 45689999998 2 2556789999999999999999 78 99653322110
Q ss_pred hHHHHHHHHHH-HhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHH
Q 008820 115 YMAWMEKVTYL-LENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCI 162 (552)
Q Consensus 115 ~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l 162 (552)
..+... ..........++.+++.+|+..+|++||++.++.+.+
T Consensus 212 -----~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 212 -----ESVSAGYRLYRPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred -----HHHHcCCcCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence 000000 0011112344599999999999999999999887754
No 490
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.15 E-value=8.7e-12 Score=140.33 Aligned_cols=111 Identities=22% Similarity=0.255 Sum_probs=68.6
Q ss_pred hccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhhhhhhccccCCCchhhhh
Q 008820 34 DFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDYIRCVSTKASDDNIACL 112 (552)
Q Consensus 34 ~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~~~~~~~~~~~~~~~~~~ 112 (552)
...||+.|||||++ . ...+++++|||||||++|||+||+ ||+..... ......|...
T Consensus 837 ~~~~t~~y~aPE~~------~---------~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~-------~~~~~~~~~~ 894 (968)
T PLN00113 837 KCFISSAYVAPETR------E---------TKDITEKSDIYGFGLILIELLTGKSPADAEFGV-------HGSIVEWARY 894 (968)
T ss_pred CccccccccCcccc------c---------CCCCCcccchhhHHHHHHHHHhCCCCCCcccCC-------CCcHHHHHHH
Confidence 34789999999998 2 356789999999999999999999 99543211 0001111110
Q ss_pred hh----hHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHHhhh
Q 008820 113 GM----YMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELI 166 (552)
Q Consensus 113 ~~----~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~~~~ 166 (552)
.. ...+.+...............++.+++.+|++.+|.+||++.++.+.+.++.
T Consensus 895 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~ 952 (968)
T PLN00113 895 CYSDCHLDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESAS 952 (968)
T ss_pred hcCccchhheeCccccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhh
Confidence 00 0000000000000000012234678899999999999999999999888765
No 491
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=99.15 E-value=2.6e-11 Score=115.42 Aligned_cols=98 Identities=16% Similarity=0.205 Sum_probs=67.0
Q ss_pred hccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhh-CC-CchHHHhhhhhhccccCCCchhhh
Q 008820 34 DFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE-QFTKELIDYIRCVSTKASDDNIAC 111 (552)
Q Consensus 34 ~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~llt-g~-pf~~~~~~~~~~~~~~~~~~~~~~ 111 (552)
...+++.|+|||++ . ...++.++|||||||++|||++ |+ ||.........
T Consensus 167 ~~~~~~~y~aPE~~------~---------~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~------------- 218 (270)
T cd05056 167 KGKLPIKWMAPESI------N---------FRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVI------------- 218 (270)
T ss_pred CCCccccccChhhh------c---------cCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHH-------------
Confidence 34456789999998 2 2456789999999999999996 99 99654322110
Q ss_pred hhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHHhhh
Q 008820 112 LGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELI 166 (552)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~~~~ 166 (552)
...... . ...........+.+++.+|+..+|.+||++.++...+..+.
T Consensus 219 ----~~~~~~-~--~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~ 266 (270)
T cd05056 219 ----GRIENG-E--RLPMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDIL 266 (270)
T ss_pred ----HHHHcC-C--cCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 000000 0 00011123345899999999999999999999988887764
No 492
>KOG1064 consensus RAVE (regulator of V-ATPase assembly) complex subunit RAV1/DMX protein, WD repeat superfamily [General function prediction only]
Probab=99.15 E-value=2.7e-10 Score=122.94 Aligned_cols=250 Identities=12% Similarity=0.146 Sum_probs=169.4
Q ss_pred CCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCccccccccCCCce
Q 008820 262 GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWR 341 (552)
Q Consensus 262 ~~~l~s~s~dg~I~iwd~~~~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~ 341 (552)
++.+..+..++...-|..+.+.. .++.+-..|.++.-+|... +.++|+.||.+++|....+......+.... .
T Consensus 2180 s~~~~~~n~~~~~~tq~~~~~~~--~~k~~v~~v~r~~sHp~~~-~Yltgs~dgsv~~~~w~~~~~v~~~rt~g~----s 2252 (2439)
T KOG1064|consen 2180 SNRFTPSNLPWLGSTQTSRGASV--MIKHPVENVRRMTSHPSDP-YYLTGSQDGSVRMFEWGHGQQVVCFRTAGN----S 2252 (2439)
T ss_pred cccCCcccCCccccceeccccee--EeecccCceeeecCCCCCc-eEEecCCCceEEEEeccCCCeEEEeeccCc----c
Confidence 34455555566565565433222 2344556777777777665 558999999999999987665544444332 2
Q ss_pred eeeEEEEeeCCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEeCCEEEEEe---CCCcEEEEECCCCceeEEE
Q 008820 342 YSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVCNGVLYSGS---RDGTIRLWSLSDHSLLTVL 418 (552)
Q Consensus 342 ~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~~---~dg~i~iwd~~~~~~~~~~ 418 (552)
...-..|+.+|+.+..+..||.+.+|.+. .++....+.|....+.+.|-...+++++ .++.+.+||..-.....-+
T Consensus 2253 ~vtr~~f~~qGnk~~i~d~dg~l~l~q~~-pk~~~s~qchnk~~~Df~Fi~s~~~tag~s~d~~n~~lwDtl~~~~~s~v 2331 (2439)
T KOG1064|consen 2253 RVTRSRFNHQGNKFGIVDGDGDLSLWQAS-PKPYTSWQCHNKALSDFRFIGSLLATAGRSSDNRNVCLWDTLLPPMNSLV 2331 (2439)
T ss_pred hhhhhhhcccCCceeeeccCCceeecccC-CcceeccccCCccccceeeeehhhhccccCCCCCcccchhcccCccccee
Confidence 22234678889999999999999999986 6677777889999999999887777765 5789999997543322222
Q ss_pred ecCCCCceEEEEEEcCCCCEEEEEECCCcEEEEeCCc--ceeeeecccceEEEEEecCCEEEEEeCCCeEEEEecCCCee
Q 008820 419 EEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDK--FMKSMQTHKGSVFAVFLEGKWLFTGGWDKTVSVQELAGDEF 496 (552)
Q Consensus 419 ~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~~--~~~~~~~h~~~v~~v~~~~~~l~sgs~dg~i~iwd~~~~~~ 496 (552)
...|.+..+. +++.|....+++|+.+|.|++||.++ ..+.++. +. ...++++|+..|.++||++....+
T Consensus 2332 ~~~H~~gaT~-l~~~P~~qllisggr~G~v~l~D~rqrql~h~~~~-------~~-~~~~f~~~ss~g~ikIw~~s~~~l 2402 (2439)
T KOG1064|consen 2332 HTCHDGGATV-LAYAPKHQLLISGGRKGEVCLFDIRQRQLRHTFQA-------LD-TREYFVTGSSEGNIKIWRLSEFGL 2402 (2439)
T ss_pred eeecCCCceE-EEEcCcceEEEecCCcCcEEEeehHHHHHHHHhhh-------hh-hhheeeccCcccceEEEEccccch
Confidence 2333344443 79999999999999999999999764 4444433 23 567899999999999999987655
Q ss_pred eeeeccCCCcccCcc--e--EEEEEe-CCeEEEEeCCCe
Q 008820 497 EEDVIPTGAIPCGSV--I--TALLYW-QGKLFVGCADRT 530 (552)
Q Consensus 497 ~~~~~~~~~~~~~~~--v--~~l~~~-~~~l~s~s~Dg~ 530 (552)
...+..... ..+. . ..+... .++|++++.||+
T Consensus 2403 l~~~p~e~a--k~gfFr~~g~Q~~v~~~nrifsCgad~~ 2439 (2439)
T KOG1064|consen 2403 LHTFPSEHA--KQGFFRNIGMQINVGQCNRIFSCGADGT 2439 (2439)
T ss_pred hhcCchhhc--ccchhhhcCceeeeccCceEEEecCCCC
Confidence 544333221 0110 1 222222 367899988874
No 493
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=99.15 E-value=1.4e-11 Score=117.82 Aligned_cols=96 Identities=15% Similarity=0.177 Sum_probs=64.0
Q ss_pred hhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhhhhhhccccCCCchhh
Q 008820 32 LSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDYIRCVSTKASDDNIA 110 (552)
Q Consensus 32 ~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~~~~~~~~~~~~~~~~ 110 (552)
.....|++.|+|||++. + ...++.++|+|||||++|+|++|+ ||.......... ...
T Consensus 158 ~~~~~~~~~y~aPE~~~------~--------~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~-~~~------- 215 (277)
T cd06917 158 RSTFVGTPYWMAPEVIT------E--------GKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMM-LIP------- 215 (277)
T ss_pred cccccCCcceeCHHHhc------c--------CCccccchhHHHHHHHHHHHHhCCCCCCCCChhhhhh-ccc-------
Confidence 34567999999999982 1 123467999999999999999999 996643331100 000
Q ss_pred hhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 111 CLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
.. ..+.-.......++.+++.+||..+|++||++.++.+
T Consensus 216 ---------~~--~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~il~ 254 (277)
T cd06917 216 ---------KS--KPPRLEDNGYSKLLREFVAACLDEEPKERLSAEELLK 254 (277)
T ss_pred ---------cC--CCCCCCcccCCHHHHHHHHHHcCCCcccCcCHHHHhh
Confidence 00 0000000012345889999999999999999887755
No 494
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=99.15 E-value=2e-11 Score=116.21 Aligned_cols=105 Identities=14% Similarity=0.171 Sum_probs=62.8
Q ss_pred hhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhh-CC-CchHHHhhhhhhccccCCCchhh
Q 008820 33 SDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE-QFTKELIDYIRCVSTKASDDNIA 110 (552)
Q Consensus 33 ~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~llt-g~-pf~~~~~~~~~~~~~~~~~~~~~ 110 (552)
....|++.|||||++...... .....++.++|+|||||++|||++ |+ ||.........
T Consensus 160 ~~~~~~~~y~aPE~~~~~~~~--------~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~------------ 219 (269)
T cd05087 160 DQLWVPLRWIAPELVDEVHGN--------LLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVL------------ 219 (269)
T ss_pred CCcCCcccccCHhHhcccccc--------ccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHH------------
Confidence 456789999999998211000 001235689999999999999996 99 99543222110
Q ss_pred hhhhhHHHHHHHHHHHhhhh-cCccccHHHHHHhhcccCCCCCcchhhHHHHH
Q 008820 111 CLGMYMAWMEKVTYLLENKF-GSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCI 162 (552)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l 162 (552)
...........+.+.. ......+.+++.+|+ .+|++||++.++++.+
T Consensus 220 ----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l 267 (269)
T cd05087 220 ----TYTVREQQLKLPKPRLKLPLSDRWYEVMQFCW-LQPEQRPSAEEVHLLL 267 (269)
T ss_pred ----HHHhhcccCCCCCCccCCCCChHHHHHHHHHh-cCcccCCCHHHHHHHh
Confidence 0000000000011111 112334778888888 6899999999998764
No 495
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=99.15 E-value=1.6e-11 Score=119.09 Aligned_cols=119 Identities=17% Similarity=0.191 Sum_probs=83.2
Q ss_pred hhhhhhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhh-C
Q 008820 10 TKSVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-G 86 (552)
Q Consensus 10 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~llt-g 86 (552)
+..++||. ||||.+.+.+-. .-.+-+==.-|.|||.+ ..++++.|||||||||+|+||+| |
T Consensus 338 ~~~~vKIsDFGLAr~~~d~~Y~-~~~~~kfPIkWtAPEa~---------------~~~~FS~kSDVWSFGVlL~E~fT~G 401 (468)
T KOG0197|consen 338 EDLVVKISDFGLARLIGDDEYT-ASEGGKFPIKWTAPEAL---------------NYGKFSSKSDVWSFGVLLWELFTYG 401 (468)
T ss_pred cCceEEEcccccccccCCCcee-ecCCCCCCceecCHHHH---------------hhCCcccccceeehhhhHHHHhccC
Confidence 45689999 999977776542 33333445679999999 45788899999999999999988 6
Q ss_pred C-CchHHHhhhhh-hc-cccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHH
Q 008820 87 E-QFTKELIDYIR-CV-STKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIR 163 (552)
Q Consensus 87 ~-pf~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~ 163 (552)
+ |+..-+...+. .+ .+..+ +.+...+.++=++...|...+|++||+-..+...+.
T Consensus 402 ~~py~~msn~ev~~~le~GyRl----------------------p~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~ 459 (468)
T KOG0197|consen 402 RVPYPGMSNEEVLELLERGYRL----------------------PRPEGCPDEVYELMKSCWHEDPEDRPTFETLREVLE 459 (468)
T ss_pred CCCCCCCCHHHHHHHHhccCcC----------------------CCCCCCCHHHHHHHHHHhhCCcccCCCHHHHHHHHH
Confidence 7 88664433111 00 11111 112224455778889999999999999887777666
Q ss_pred hhh
Q 008820 164 ELI 166 (552)
Q Consensus 164 ~~~ 166 (552)
.+.
T Consensus 460 ~~~ 462 (468)
T KOG0197|consen 460 DFF 462 (468)
T ss_pred Hhh
Confidence 554
No 496
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=99.15 E-value=8.3e-12 Score=120.33 Aligned_cols=100 Identities=13% Similarity=0.193 Sum_probs=63.8
Q ss_pred hhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhhhhhhccccCCCchhhh
Q 008820 33 SDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDYIRCVSTKASDDNIAC 111 (552)
Q Consensus 33 ~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~~~~~~~~~~~~~~~~~ 111 (552)
....|++.|+|||++..... ....++.++|+|||||++|||++|+ ||.........
T Consensus 168 ~~~~~~~~y~aPE~~~~~~~----------~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~------------- 224 (292)
T cd06644 168 DSFIGTPYWMAPEVVMCETM----------KDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVL------------- 224 (292)
T ss_pred ceecCCccccCceeeccccc----------cCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHHH-------------
Confidence 45679999999999821110 1234567999999999999999999 99653322110
Q ss_pred hhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 112 LGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
........ ...........++.+++.+||..+|++||+..++.+
T Consensus 225 ----~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 268 (292)
T cd06644 225 ----LKIAKSEP-PTLSQPSKWSMEFRDFLKTALDKHPETRPSAAQLLE 268 (292)
T ss_pred ----HHHhcCCC-ccCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 00000000 000001122345889999999999999999887654
No 497
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=99.15 E-value=1.9e-11 Score=115.34 Aligned_cols=92 Identities=17% Similarity=0.164 Sum_probs=63.2
Q ss_pred ccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhh-CC-CchHHHhhhhhhccccCCCchhhhh
Q 008820 35 FLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE-QFTKELIDYIRCVSTKASDDNIACL 112 (552)
Q Consensus 35 ~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~llt-g~-pf~~~~~~~~~~~~~~~~~~~~~~~ 112 (552)
..|+..|+|||++ . ...++.++|||||||+||+|++ |+ ||.......+.
T Consensus 161 ~~~~~~y~~pe~~------~---------~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~-------------- 211 (256)
T cd05113 161 SKFPVRWSPPEVL------L---------YSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETV-------------- 211 (256)
T ss_pred CccChhhCCHHHH------h---------cCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHH--------------
Confidence 3467789999998 2 2456789999999999999999 99 99653322110
Q ss_pred hhhHHHHHHHHHH-HhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHH
Q 008820 113 GMYMAWMEKVTYL-LENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCI 162 (552)
Q Consensus 113 ~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l 162 (552)
...... ...........+.+++.+||+.+|.+||++.++...+
T Consensus 212 -------~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~ 255 (256)
T cd05113 212 -------EKVSQGLRLYRPHLASEKVYAIMYSCWHEKAEERPTFQQLLSSI 255 (256)
T ss_pred -------HHHhcCCCCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHhh
Confidence 000000 0001112334589999999999999999998877643
No 498
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=99.14 E-value=2.8e-11 Score=116.81 Aligned_cols=112 Identities=16% Similarity=0.199 Sum_probs=62.8
Q ss_pred ccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhh-hhhhc-c--ccCCCchh
Q 008820 35 FLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELID-YIRCV-S--TKASDDNI 109 (552)
Q Consensus 35 ~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~-~~~~~-~--~~~~~~~~ 109 (552)
-.+++.|+|||++ .+ ...++.++|+|||||+||+|++|. ||.+.+.. .+..+ . .......|
T Consensus 171 ~~~~~~~~aPE~~------~~--------~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (295)
T cd07837 171 EIVTLWYRAPEVL------LG--------STHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVW 236 (295)
T ss_pred cccccCCCChHHh------hC--------CCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCChhhC
Confidence 3678999999998 22 134568999999999999999999 99543221 11000 0 00000001
Q ss_pred hhhhhhHHHHH--H-HHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 110 ACLGMYMAWME--K-VTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 110 ~~~~~~~~~~~--~-~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
........... . .+..+.........++.+++.+||..+|.+||++.++..
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~ 290 (295)
T cd07837 237 PGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALT 290 (295)
T ss_pred cchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 00000000000 0 000011111123445889999999999999999876543
No 499
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=99.14 E-value=1.3e-11 Score=118.88 Aligned_cols=99 Identities=17% Similarity=0.196 Sum_probs=62.6
Q ss_pred hhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhh-hhhhccccCCCchhh
Q 008820 33 SDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELID-YIRCVSTKASDDNIA 110 (552)
Q Consensus 33 ~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~-~~~~~~~~~~~~~~~ 110 (552)
....|++.|+|||++.... ......+.++|||||||++|||++|+ ||...... .+..+.....
T Consensus 186 ~~~~~~~~y~aPE~~~~~~----------~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~~~----- 250 (291)
T cd06639 186 NTSVGTPFWMAPEVIACEQ----------QYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFKIPRNPP----- 250 (291)
T ss_pred cCccCCccccChhhhcCCC----------CcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHHHHHHhcCCC-----
Confidence 3467999999999982100 01123568999999999999999999 99553221 0100000000
Q ss_pred hhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 111 CLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
+ ...........+.+++.+|++.+|++||++.++..
T Consensus 251 ------------~--~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 286 (291)
T cd06639 251 ------------P--TLLHPEKWCRSFNHFISQCLIKDFEARPSVTHLLE 286 (291)
T ss_pred ------------C--CCCcccccCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 0 00000112235889999999999999999887655
No 500
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=99.14 E-value=2.8e-11 Score=114.90 Aligned_cols=95 Identities=19% Similarity=0.314 Sum_probs=62.8
Q ss_pred ccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhhhhhhccccCCCchhhhhh
Q 008820 35 FLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDYIRCVSTKASDDNIACLG 113 (552)
Q Consensus 35 ~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~~~~~~~~~~~~~~~~~~~ 113 (552)
..|++.|+|||++ .+ ...++++|+|||||++|+|++|+ ||....... .
T Consensus 159 ~~~~~~y~~PE~~------~~---------~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~----------------~ 207 (265)
T cd06605 159 FVGTSSYMAPERI------QG---------NDYSVKSDIWSLGLSLIELATGRFPYPPENDPP----------------D 207 (265)
T ss_pred ccCChhccCHHHH------cC---------CCCCchhhHHHHHHHHHHHHhCCCCCCcccccc----------------c
Confidence 8899999999998 32 45678999999999999999999 996532110 0
Q ss_pred hhHHHHHHHHHHHhhhhc--CccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 114 MYMAWMEKVTYLLENKFG--SEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
.................. ....++.+++.+|+..+|.+||++.++..
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 256 (265)
T cd06605 208 GIFELLQYIVNEPPPRLPSGKFSPDFQDFVNLCLIKDPRERPSYKELLE 256 (265)
T ss_pred cHHHHHHHHhcCCCCCCChhhcCHHHHHHHHHHcCCCchhCcCHHHHhh
Confidence 000000100000000000 02335889999999999999999887665
Done!