Query 008820
Match_columns 552
No_of_seqs 953 out of 4481
Neff 10.5
Searched_HMMs 29240
Date Mon Mar 25 12:28:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008820.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/008820hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1vyh_C Platelet-activating fac 100.0 1.1E-39 3.8E-44 329.2 39.1 279 246-537 102-410 (410)
2 3ow8_A WD repeat-containing pr 100.0 5.2E-39 1.8E-43 313.1 40.7 286 239-537 19-320 (321)
3 1got_B GT-beta; complex (GTP-b 100.0 7.8E-38 2.7E-42 307.7 43.6 281 244-535 47-340 (340)
4 2ynn_A Coatomer subunit beta'; 100.0 1.2E-37 4.2E-42 301.2 40.4 280 245-537 6-301 (304)
5 2pbi_B Guanine nucleotide-bind 100.0 5.6E-37 1.9E-41 303.1 42.3 282 244-535 56-354 (354)
6 4g56_B MGC81050 protein; prote 100.0 7.9E-38 2.7E-42 309.5 35.5 285 248-541 38-346 (357)
7 4gqb_B Methylosome protein 50; 100.0 6.6E-38 2.3E-42 307.8 34.6 278 250-538 28-331 (344)
8 4ery_A WD repeat-containing pr 100.0 6.1E-37 2.1E-41 297.5 39.5 284 242-537 13-311 (312)
9 3iz6_a 40S ribosomal protein R 100.0 1.5E-37 5.3E-42 310.4 34.2 293 241-539 55-376 (380)
10 1nr0_A Actin interacting prote 100.0 1.5E-36 5.1E-41 322.4 43.5 324 217-549 145-579 (611)
11 2hes_X YDR267CP; beta-propelle 100.0 2.5E-36 8.6E-41 295.6 40.9 288 244-538 6-328 (330)
12 3fm0_A Protein CIAO1; WDR39,SG 100.0 4.2E-36 1.4E-40 295.9 39.0 293 241-539 4-336 (345)
13 1vyh_C Platelet-activating fac 100.0 1.9E-36 6.6E-41 305.5 36.6 267 218-492 107-410 (410)
14 3frx_A Guanine nucleotide-bind 100.0 1.2E-35 4.1E-40 289.3 40.2 283 244-537 9-316 (319)
15 2ovr_B FBW7, F-BOX/WD repeat p 100.0 2.3E-35 7.9E-40 301.3 42.4 298 228-539 126-443 (445)
16 3ow8_A WD repeat-containing pr 100.0 1.2E-35 4.1E-40 289.3 38.1 267 218-492 31-320 (321)
17 1nr0_A Actin interacting prote 100.0 5.1E-35 1.7E-39 310.6 45.3 304 221-538 20-397 (611)
18 1erj_A Transcriptional repress 100.0 4.3E-35 1.5E-39 294.1 40.2 280 245-538 57-389 (393)
19 1got_B GT-beta; complex (GTP-b 100.0 7.2E-35 2.5E-39 286.5 39.4 266 218-490 54-340 (340)
20 2ovr_B FBW7, F-BOX/WD repeat p 100.0 2E-34 6.9E-39 294.3 41.4 285 245-546 111-398 (445)
21 2xzm_R RACK1; ribosome, transl 100.0 3.2E-34 1.1E-38 282.2 41.2 282 244-537 13-339 (343)
22 4aow_A Guanine nucleotide-bind 100.0 2.4E-34 8.3E-39 282.3 40.3 285 245-538 31-337 (340)
23 3odt_A Protein DOA1; ubiquitin 100.0 8.2E-34 2.8E-38 275.0 42.4 281 241-538 7-296 (313)
24 2ymu_A WD-40 repeat protein; u 100.0 1.7E-33 5.7E-38 297.3 46.7 314 218-551 220-550 (577)
25 2ymu_A WD-40 repeat protein; u 100.0 8.3E-34 2.8E-38 299.7 43.9 300 218-535 261-577 (577)
26 3v7d_B Cell division control p 100.0 1.4E-33 4.9E-38 289.6 44.3 284 244-544 113-426 (464)
27 1p22_A F-BOX/WD-repeat protein 100.0 1.6E-34 5.6E-39 294.1 34.9 275 247-540 128-416 (435)
28 4gqb_B Methylosome protein 50; 100.0 1.4E-34 4.9E-39 284.0 32.5 267 221-496 32-334 (344)
29 3v7d_B Cell division control p 100.0 5.3E-33 1.8E-37 285.4 45.7 295 230-537 131-462 (464)
30 3fm0_A Protein CIAO1; WDR39,SG 100.0 5.6E-34 1.9E-38 280.7 36.8 273 221-497 18-339 (345)
31 2pbi_B Guanine nucleotide-bind 100.0 1.2E-33 4.1E-38 279.2 38.1 267 218-490 63-354 (354)
32 3iz6_a 40S ribosomal protein R 100.0 3.6E-35 1.2E-39 293.2 27.4 277 218-495 65-377 (380)
33 1sq9_A Antiviral protein SKI8; 100.0 6.7E-34 2.3E-38 285.7 36.4 293 245-538 9-395 (397)
34 3frx_A Guanine nucleotide-bind 100.0 1.3E-33 4.4E-38 274.9 36.8 268 216-494 14-318 (319)
35 1gxr_A ESG1, transducin-like e 100.0 3.7E-33 1.3E-37 273.3 39.7 302 222-537 12-336 (337)
36 3vl1_A 26S proteasome regulato 100.0 2.7E-33 9.3E-38 283.5 37.3 309 222-538 59-419 (420)
37 1r5m_A SIR4-interacting protei 100.0 4.7E-33 1.6E-37 281.6 38.4 307 221-537 47-424 (425)
38 3ei3_B DNA damage-binding prot 100.0 3.4E-33 1.2E-37 279.3 36.7 282 244-538 65-382 (383)
39 2pm9_A Protein WEB1, protein t 100.0 3.3E-34 1.1E-38 289.7 28.8 314 222-538 15-414 (416)
40 2ynn_A Coatomer subunit beta'; 100.0 7.7E-33 2.6E-37 267.5 36.2 266 220-493 14-302 (304)
41 2hes_X YDR267CP; beta-propelle 100.0 5.7E-33 1.9E-37 271.7 35.7 268 219-493 14-328 (330)
42 3gre_A Serine/threonine-protei 100.0 7E-34 2.4E-38 289.6 28.6 291 242-535 52-437 (437)
43 3zwl_B Eukaryotic translation 100.0 5.2E-32 1.8E-36 268.5 41.1 282 242-538 22-346 (369)
44 3dm0_A Maltose-binding peripla 100.0 1.9E-32 6.4E-37 295.6 40.8 283 245-537 375-692 (694)
45 4ery_A WD repeat-containing pr 100.0 4E-32 1.4E-36 263.6 38.6 269 218-492 22-311 (312)
46 1erj_A Transcriptional repress 100.0 1.9E-32 6.7E-37 274.7 37.2 265 219-493 64-389 (393)
47 4g56_B MGC81050 protein; prote 100.0 3.6E-33 1.2E-37 276.0 30.6 267 220-494 43-344 (357)
48 2xzm_R RACK1; ribosome, transl 100.0 5.8E-32 2E-36 266.1 38.8 266 220-494 22-341 (343)
49 1k8k_C P40, ARP2/3 complex 41 100.0 3.4E-32 1.2E-36 270.5 36.9 283 248-537 4-360 (372)
50 1p22_A F-BOX/WD-repeat protein 100.0 1.4E-32 4.9E-37 279.7 34.4 257 230-497 142-418 (435)
51 3sfz_A APAF-1, apoptotic pepti 100.0 5.8E-32 2E-36 310.9 43.5 321 217-551 613-1086(1249)
52 3dwl_C Actin-related protein 2 100.0 1.2E-33 4E-38 282.0 24.0 282 248-536 7-377 (377)
53 3i2n_A WD repeat-containing pr 100.0 7.8E-32 2.7E-36 266.2 36.7 292 241-538 7-353 (357)
54 1r5m_A SIR4-interacting protei 100.0 1.2E-31 4.2E-36 271.2 36.7 279 245-538 38-361 (425)
55 2pm7_B Protein transport prote 100.0 5.5E-32 1.9E-36 260.6 32.5 243 246-493 3-285 (297)
56 4e54_B DNA damage-binding prot 100.0 6.4E-33 2.2E-37 282.2 27.2 282 247-538 114-430 (435)
57 2oaj_A Protein SNI1; WD40 repe 100.0 1E-31 3.6E-36 295.8 38.9 326 221-550 100-675 (902)
58 3k26_A Polycomb protein EED; W 100.0 1.8E-32 6.2E-37 271.6 29.3 280 247-537 13-365 (366)
59 2j04_B YDR362CP, TAU91; beta p 100.0 1.7E-32 6E-37 282.8 26.7 273 262-538 173-517 (524)
60 4aez_A CDC20, WD repeat-contai 100.0 3.7E-31 1.3E-35 266.2 35.3 281 244-538 83-380 (401)
61 3vl1_A 26S proteasome regulato 100.0 4.3E-32 1.5E-36 274.7 27.6 274 253-538 57-365 (420)
62 1pgu_A Actin interacting prote 100.0 2.3E-30 7.8E-35 275.2 41.4 322 217-551 158-585 (615)
63 3k26_A Polycomb protein EED; W 100.0 2.7E-31 9.2E-36 263.2 31.3 270 219-492 18-365 (366)
64 3dm0_A Maltose-binding peripla 100.0 9.8E-31 3.4E-35 282.2 37.8 269 217-492 380-692 (694)
65 3mkq_A Coatomer beta'-subunit; 100.0 1.9E-30 6.6E-35 285.3 40.4 282 245-538 6-302 (814)
66 3zwl_B Eukaryotic translation 100.0 5.5E-30 1.9E-34 253.9 39.4 274 218-496 31-349 (369)
67 4a11_B DNA excision repair pro 100.0 1.2E-30 4.2E-35 262.5 34.4 282 245-538 36-365 (408)
68 3bg1_A Protein SEC13 homolog; 100.0 9.2E-32 3.2E-36 261.4 25.0 241 247-492 8-292 (316)
69 4h5i_A Guanine nucleotide-exch 100.0 6.8E-31 2.3E-35 260.5 31.4 280 253-541 15-346 (365)
70 4aow_A Guanine nucleotide-bind 100.0 9.7E-30 3.3E-34 249.5 39.1 271 216-495 35-339 (340)
71 1k8k_C P40, ARP2/3 complex 41 100.0 3E-30 1E-34 256.4 35.9 272 219-495 8-363 (372)
72 2oaj_A Protein SNI1; WD40 repe 100.0 1.8E-30 6.1E-35 286.0 37.1 193 220-417 18-248 (902)
73 4ggc_A P55CDC, cell division c 100.0 6E-30 2E-34 248.5 35.9 268 255-538 28-315 (318)
74 1gxr_A ESG1, transducin-like e 100.0 5.8E-30 2E-34 250.5 35.3 277 251-538 8-296 (337)
75 3dw8_B Serine/threonine-protei 100.0 2E-30 6.8E-35 264.6 33.3 282 250-537 26-445 (447)
76 4gga_A P55CDC, cell division c 100.0 1.1E-29 3.8E-34 257.1 38.4 268 254-538 107-395 (420)
77 3sfz_A APAF-1, apoptotic pepti 100.0 3.6E-30 1.2E-34 296.1 38.9 324 217-550 655-1127(1249)
78 1yfq_A Cell cycle arrest prote 100.0 4.2E-30 1.4E-34 252.4 33.9 275 248-536 7-322 (342)
79 3mmy_A MRNA export factor; mRN 100.0 5.2E-30 1.8E-34 254.0 34.0 281 244-537 31-345 (368)
80 1pgu_A Actin interacting prote 100.0 1.5E-29 5E-34 269.0 39.6 300 220-537 19-365 (615)
81 2pm9_A Protein WEB1, protein t 100.0 3.9E-31 1.3E-35 267.1 25.1 279 252-540 12-339 (416)
82 3i2n_A WD repeat-containing pr 100.0 4.6E-30 1.6E-34 253.5 31.6 274 219-495 18-355 (357)
83 1sq9_A Antiviral protein SKI8; 100.0 9.6E-30 3.3E-34 255.3 34.2 273 218-494 15-396 (397)
84 4gga_A P55CDC, cell division c 100.0 6.3E-29 2.2E-33 251.5 40.4 263 221-495 107-397 (420)
85 2pm7_B Protein transport prote 100.0 1.3E-29 4.4E-34 244.0 32.5 247 286-540 3-287 (297)
86 4aez_A CDC20, WD repeat-contai 100.0 2.8E-29 9.7E-34 252.5 35.4 259 231-499 103-386 (401)
87 3dwl_C Actin-related protein 2 100.0 1.3E-30 4.6E-35 259.8 25.5 265 221-491 13-377 (377)
88 3jrp_A Fusion protein of prote 100.0 8.9E-30 3E-34 253.5 31.1 246 245-538 4-287 (379)
89 3f3f_A Nucleoporin SEH1; struc 100.0 2.5E-29 8.5E-34 246.8 32.3 246 248-497 7-341 (351)
90 2aq5_A Coronin-1A; WD40 repeat 100.0 5.9E-30 2E-34 257.6 28.1 279 257-541 39-345 (402)
91 4a11_B DNA excision repair pro 100.0 7.6E-29 2.6E-33 249.3 35.9 307 218-537 42-404 (408)
92 3odt_A Protein DOA1; ubiquitin 100.0 2.1E-28 7.3E-33 236.8 37.3 266 218-499 17-302 (313)
93 3mkq_A Coatomer beta'-subunit; 100.0 2.7E-28 9.1E-33 268.2 39.3 309 220-537 14-385 (814)
94 2j04_B YDR362CP, TAU91; beta p 100.0 1E-29 3.6E-34 262.1 25.4 256 232-494 174-518 (524)
95 3gre_A Serine/threonine-protei 100.0 7.3E-29 2.5E-33 252.4 30.6 268 218-490 62-437 (437)
96 3ei3_B DNA damage-binding prot 100.0 2.1E-28 7.2E-33 244.5 32.2 262 220-493 74-382 (383)
97 4ggc_A P55CDC, cell division c 100.0 1.8E-27 6.1E-32 230.9 37.9 260 223-494 29-316 (318)
98 3bg1_A Protein SEC13 homolog; 100.0 5.3E-29 1.8E-33 241.9 25.4 233 218-454 12-292 (316)
99 2vdu_B TRNA (guanine-N(7)-)-me 100.0 2.5E-27 8.6E-32 242.0 35.9 277 253-541 5-394 (450)
100 4h5i_A Guanine nucleotide-exch 100.0 1.9E-27 6.6E-32 235.6 34.0 267 219-494 14-344 (365)
101 2xyi_A Probable histone-bindin 100.0 4.2E-28 1.4E-32 246.2 29.5 252 239-494 115-411 (430)
102 3vu4_A KMHSV2; beta-propeller 100.0 1.2E-27 4E-32 236.3 31.2 278 244-538 11-336 (355)
103 1yfq_A Cell cycle arrest prote 100.0 7.3E-27 2.5E-31 229.2 36.2 262 217-490 9-321 (342)
104 4e54_B DNA damage-binding prot 100.0 4.2E-28 1.4E-32 246.6 26.9 269 220-496 120-433 (435)
105 3f3f_A Nucleoporin SEH1; struc 100.0 3.7E-27 1.3E-31 231.3 32.5 244 286-538 5-337 (351)
106 3lrv_A PRE-mRNA-splicing facto 100.0 1.9E-27 6.5E-32 233.9 30.1 265 262-544 48-339 (343)
107 3jro_A Fusion protein of prote 100.0 4.7E-28 1.6E-32 262.9 26.1 245 246-538 3-285 (753)
108 2aq5_A Coronin-1A; WD40 repeat 100.0 1.8E-27 6.3E-32 239.4 27.9 255 237-497 53-346 (402)
109 2w18_A PALB2, fancn, partner a 100.0 1.7E-26 5.7E-31 218.5 31.3 267 264-537 56-356 (356)
110 2j04_A TAU60, YPL007P, hypothe 100.0 1.2E-27 4.2E-32 240.7 24.4 255 250-537 13-296 (588)
111 3mmy_A MRNA export factor; mRN 100.0 4.2E-26 1.5E-30 225.7 32.4 266 216-492 36-345 (368)
112 3dw8_B Serine/threonine-protei 100.0 1.2E-26 4.3E-31 236.5 29.0 268 219-492 28-445 (447)
113 3jrp_A Fusion protein of prote 100.0 1.2E-25 4E-30 223.6 34.5 233 218-454 10-286 (379)
114 2j04_A TAU60, YPL007P, hypothe 100.0 6.1E-28 2.1E-32 243.0 15.0 250 221-492 17-296 (588)
115 2vdu_B TRNA (guanine-N(7)-)-me 100.0 4.8E-25 1.6E-29 225.1 36.4 238 250-492 100-390 (450)
116 1l0q_A Surface layer protein; 100.0 9.9E-25 3.4E-29 218.4 38.1 268 263-549 3-285 (391)
117 3vu4_A KMHSV2; beta-propeller 99.9 3.2E-25 1.1E-29 218.9 33.5 260 218-494 18-337 (355)
118 2xyi_A Probable histone-bindin 99.9 1.4E-25 5E-30 227.5 31.4 257 274-537 109-409 (430)
119 3lrv_A PRE-mRNA-splicing facto 99.9 8.9E-26 3E-30 221.9 26.2 257 229-494 46-334 (343)
120 1l0q_A Surface layer protein; 99.9 1.1E-23 3.8E-28 210.7 38.7 246 243-501 23-283 (391)
121 4gq1_A NUP37; propeller, trans 99.9 1E-24 3.5E-29 218.4 28.4 228 302-537 98-388 (393)
122 3bws_A Protein LP49; two-domai 99.9 1.1E-23 3.9E-28 213.7 35.2 277 243-537 114-431 (433)
123 4gq1_A NUP37; propeller, trans 99.9 3.9E-25 1.3E-29 221.5 23.0 225 225-452 95-386 (393)
124 2w18_A PALB2, fancn, partner a 99.9 2.3E-24 7.7E-29 204.0 26.2 198 250-453 134-355 (356)
125 3jro_A Fusion protein of prote 99.9 7.4E-25 2.5E-29 237.8 25.6 233 218-454 8-284 (753)
126 3bws_A Protein LP49; two-domai 99.9 3E-23 1E-27 210.6 34.8 260 223-493 126-432 (433)
127 1nir_A Nitrite reductase; hemo 99.9 1.3E-20 4.4E-25 195.8 33.0 315 229-549 147-524 (543)
128 2hqs_A Protein TOLB; TOLB, PAL 99.9 7.4E-20 2.5E-24 184.2 28.1 278 254-550 64-397 (415)
129 1pby_B Quinohemoprotein amine 99.9 1.5E-19 5.2E-24 176.3 28.6 272 263-549 2-320 (337)
130 1nir_A Nitrite reductase; hemo 99.9 1.3E-19 4.3E-24 188.3 29.1 261 262-538 149-458 (543)
131 2hqs_A Protein TOLB; TOLB, PAL 99.9 2E-19 6.9E-24 181.0 28.2 256 246-520 111-408 (415)
132 3vgz_A Uncharacterized protein 99.8 8E-18 2.7E-22 165.3 34.7 270 252-528 40-334 (353)
133 3u4y_A Uncharacterized protein 99.8 5.7E-18 1.9E-22 165.0 32.3 268 262-538 10-304 (331)
134 1ri6_A Putative isomerase YBHE 99.8 6.9E-18 2.4E-22 164.9 31.6 265 264-539 7-309 (343)
135 2ecf_A Dipeptidyl peptidase IV 99.8 4.4E-18 1.5E-22 184.8 28.1 279 252-546 36-421 (741)
136 1ri6_A Putative isomerase YBHE 99.8 6.4E-17 2.2E-21 158.0 32.8 243 249-496 34-313 (343)
137 2ecf_A Dipeptidyl peptidase IV 99.8 2E-17 6.7E-22 179.7 29.4 307 219-537 36-458 (741)
138 2z3z_A Dipeptidyl aminopeptida 99.8 9.9E-17 3.4E-21 173.2 34.3 275 253-538 82-435 (706)
139 4aw0_A HPDK1, 3-phosphoinositi 99.8 1.7E-20 5.8E-25 177.5 2.7 111 13-159 170-283 (311)
140 2ojh_A Uncharacterized protein 99.8 2E-17 6.9E-22 157.7 24.1 248 267-528 17-292 (297)
141 3o4h_A Acylamino-acid-releasin 99.8 2.9E-17 9.9E-22 173.2 26.9 260 252-536 21-313 (582)
142 1jmx_B Amine dehydrogenase; ox 99.8 6.7E-17 2.3E-21 158.4 26.9 271 258-547 5-333 (349)
143 1k32_A Tricorn protease; prote 99.8 3.1E-16 1.1E-20 176.5 34.7 310 220-549 53-470 (1045)
144 3omv_A RAF proto-oncogene seri 99.8 3.5E-20 1.2E-24 175.9 1.6 125 12-165 169-298 (307)
145 4aoj_A High affinity nerve gro 99.8 1.1E-19 3.9E-24 174.9 4.9 122 11-168 194-320 (329)
146 4g3f_A NF-kappa-beta-inducing 99.8 6.9E-20 2.4E-24 175.6 3.1 120 14-166 190-315 (336)
147 3hyh_A Carbon catabolite-derep 99.8 9E-20 3.1E-24 170.2 3.5 110 13-160 150-262 (275)
148 3hfq_A Uncharacterized protein 99.8 4.6E-16 1.6E-20 152.6 29.7 256 241-497 28-323 (347)
149 1xfd_A DIP, dipeptidyl aminope 99.8 2.6E-16 8.9E-21 170.4 29.3 268 248-520 53-420 (723)
150 4b9d_A Serine/threonine-protei 99.8 9.2E-20 3.2E-24 175.5 1.4 110 13-160 163-276 (350)
151 3fpq_A Serine/threonine-protei 99.8 1.3E-19 4.6E-24 170.6 2.4 109 13-160 170-282 (290)
152 4fih_A Serine/threonine-protei 99.8 2.8E-19 9.7E-24 171.8 4.6 113 13-160 208-323 (346)
153 4asz_A BDNF/NT-3 growth factor 99.8 1.6E-19 5.4E-24 171.4 2.7 120 11-166 164-288 (299)
154 3u4y_A Uncharacterized protein 99.7 9.1E-16 3.1E-20 149.3 29.1 240 246-496 34-307 (331)
155 3ubd_A Ribosomal protein S6 ki 99.7 1.7E-19 5.8E-24 170.7 2.1 106 13-156 164-272 (304)
156 4gt4_A Tyrosine-protein kinase 99.7 3.3E-19 1.1E-23 169.9 3.7 120 10-165 180-304 (308)
157 3vgz_A Uncharacterized protein 99.7 3.6E-15 1.2E-19 146.3 32.6 222 253-484 89-335 (353)
158 2z3z_A Dipeptidyl aminopeptida 99.7 1E-16 3.6E-21 173.0 23.4 266 255-537 28-388 (706)
159 1xfd_A DIP, dipeptidyl aminope 99.7 6E-17 2.1E-21 175.3 21.4 274 255-539 19-394 (723)
160 3hfq_A Uncharacterized protein 99.7 4.3E-15 1.5E-19 145.6 32.7 263 271-543 15-322 (347)
161 4ase_A Vascular endothelial gr 99.7 2.9E-19 1E-23 173.4 2.6 121 11-166 221-346 (353)
162 2oit_A Nucleoporin 214KDA; NH2 99.7 1.1E-15 3.8E-20 154.2 28.9 199 252-455 36-278 (434)
163 1k32_A Tricorn protease; prote 99.7 3.7E-16 1.3E-20 175.9 27.4 275 245-537 196-501 (1045)
164 2ojh_A Uncharacterized protein 99.7 3.6E-16 1.2E-20 149.0 23.0 229 247-484 36-293 (297)
165 3scy_A Hypothetical bacterial 99.7 1.9E-14 6.3E-19 142.0 35.2 261 251-518 48-360 (361)
166 4fie_A Serine/threonine-protei 99.7 9.7E-19 3.3E-23 172.4 3.6 113 13-160 285-400 (423)
167 2oit_A Nucleoporin 214KDA; NH2 99.7 5.3E-16 1.8E-20 156.6 22.8 184 222-412 39-279 (434)
168 1pby_B Quinohemoprotein amine 99.7 2.9E-15 9.9E-20 145.8 25.5 232 254-501 35-318 (337)
169 3o4h_A Acylamino-acid-releasin 99.7 2.6E-15 8.9E-20 158.2 25.0 256 222-493 24-315 (582)
170 3scy_A Hypothetical bacterial 99.7 1.3E-13 4.4E-18 135.9 32.3 265 270-544 25-343 (361)
171 3hmm_A TGF-beta receptor type- 99.7 7.2E-18 2.5E-22 161.1 1.4 143 11-168 144-298 (303)
172 3azo_A Aminopeptidase; POP fam 99.7 8.9E-14 3E-18 148.9 31.0 292 246-546 17-375 (662)
173 3pe7_A Oligogalacturonate lyas 99.6 7.8E-14 2.7E-18 138.8 27.5 290 243-538 21-382 (388)
174 4g31_A Eukaryotic translation 99.6 2.7E-17 9.4E-22 156.3 1.7 110 13-160 156-279 (299)
175 4b99_A Mitogen-activated prote 99.6 6.7E-17 2.3E-21 159.7 4.0 132 14-160 197-344 (398)
176 1jmx_B Amine dehydrogenase; ox 99.6 1.6E-13 5.6E-18 134.1 28.1 262 229-501 9-333 (349)
177 1z68_A Fibroblast activation p 99.6 1.1E-14 3.8E-19 157.5 21.5 267 257-538 20-391 (719)
178 3v5w_A G-protein coupled recep 99.6 9.5E-17 3.2E-21 165.7 4.0 107 13-155 330-439 (689)
179 1z68_A Fibroblast activation p 99.6 3.6E-14 1.2E-18 153.4 23.8 307 225-537 21-442 (719)
180 3uto_A Twitchin; kinase, muscl 99.6 4.4E-17 1.5E-21 169.1 0.5 112 14-160 296-410 (573)
181 1q7f_A NHL, brain tumor CG1071 99.6 1.2E-12 4E-17 124.4 30.1 235 249-493 26-280 (286)
182 1jof_A Carboxy-CIS,CIS-muconat 99.6 8.5E-13 2.9E-17 130.3 29.8 265 264-539 4-342 (365)
183 1jof_A Carboxy-CIS,CIS-muconat 99.6 5.2E-13 1.8E-17 131.8 28.0 244 251-496 38-344 (365)
184 2gop_A Trilobed protease; beta 99.6 8.3E-13 2.8E-17 129.2 29.3 249 271-550 42-340 (347)
185 4f9c_A Cell division cycle 7-r 99.6 4.9E-16 1.7E-20 151.8 5.9 45 32-90 203-248 (361)
186 3fvz_A Peptidyl-glycine alpha- 99.6 1.3E-12 4.4E-17 126.9 28.2 239 253-493 24-322 (329)
187 1q7f_A NHL, brain tumor CG1071 99.6 5E-12 1.7E-16 120.0 30.8 242 290-539 27-281 (286)
188 3soa_A Calcium/calmodulin-depe 99.6 6.5E-16 2.2E-20 155.7 2.8 115 12-160 150-267 (444)
189 2oiz_A Aromatic amine dehydrog 99.6 1.2E-12 4E-17 128.8 25.7 262 270-546 29-343 (361)
190 2yab_A Death-associated protei 99.6 6.6E-16 2.2E-20 151.6 2.1 113 13-160 157-272 (361)
191 3q7m_A Lipoprotein YFGL, BAMB; 99.5 1.2E-11 4.2E-16 122.4 32.7 288 233-535 64-375 (376)
192 2izr_A Casein kinase I isoform 99.5 3.5E-15 1.2E-19 145.2 6.3 126 13-167 148-281 (330)
193 3uzp_A CKI-delta, CKID, casein 99.5 5.3E-15 1.8E-19 141.6 6.1 129 10-167 143-280 (296)
194 2y0a_A Death-associated protei 99.5 1.3E-15 4.4E-20 147.9 1.8 113 13-160 156-271 (326)
195 4hgt_A Casein kinase I isoform 99.5 6.1E-15 2.1E-19 141.2 6.3 130 9-167 142-280 (296)
196 3q7m_A Lipoprotein YFGL, BAMB; 99.5 1.5E-11 5.1E-16 121.8 31.0 274 258-547 49-345 (376)
197 2bdw_A Hypothetical protein K1 99.5 1.2E-15 4.2E-20 150.1 1.3 113 13-160 169-284 (362)
198 4a5s_A Dipeptidyl peptidase 4 99.5 1.4E-12 4.8E-17 141.2 25.5 271 254-540 18-400 (740)
199 3c5m_A Oligogalacturonate lyas 99.5 2.2E-12 7.6E-17 128.4 24.6 292 244-541 22-385 (396)
200 1csn_A Casein kinase-1; phosph 99.5 7.4E-15 2.5E-19 140.7 5.9 126 13-167 149-283 (298)
201 3fe3_A MAP/microtubule affinit 99.5 5.4E-15 1.9E-19 143.3 4.6 109 14-160 153-264 (328)
202 4eqm_A Protein kinase; transfe 99.5 2.4E-15 8.1E-20 143.8 1.8 122 14-167 150-275 (294)
203 2z2n_A Virginiamycin B lyase; 99.5 6.4E-10 2.2E-14 105.8 39.8 282 241-537 3-294 (299)
204 4a5s_A Dipeptidyl peptidase 4 99.5 1.1E-11 3.8E-16 134.2 30.5 307 223-537 20-448 (740)
205 1o6l_A RAC-beta serine/threoni 99.5 5.6E-15 1.9E-19 143.6 4.0 103 14-154 144-249 (337)
206 3c0i_A Peripheral plasma membr 99.5 3.6E-15 1.2E-19 146.3 2.6 112 14-160 172-286 (351)
207 2oiz_A Aromatic amine dehydrog 99.5 1E-11 3.5E-16 122.0 27.4 257 245-519 44-357 (361)
208 3p86_A Serine/threonine-protei 99.5 4.7E-15 1.6E-19 142.7 3.3 116 14-167 178-298 (309)
209 2qr7_A Ribosomal protein S6 ki 99.5 1.9E-15 6.4E-20 147.5 0.4 113 13-160 158-277 (342)
210 3zgw_A Maternal embryonic leuc 99.5 5.1E-15 1.7E-19 144.3 3.2 113 13-161 146-261 (347)
211 1tki_A Titin; serine kinase, m 99.5 2.4E-15 8.1E-20 145.6 0.7 113 13-160 142-257 (321)
212 3azo_A Aminopeptidase; POP fam 99.5 9.7E-12 3.3E-16 133.0 28.8 246 248-499 63-375 (662)
213 2r5t_A Serine/threonine-protei 99.5 7.1E-15 2.4E-19 144.8 4.0 108 14-159 178-288 (373)
214 2v62_A Serine/threonine-protei 99.5 1.5E-14 5.2E-19 141.5 6.2 126 13-165 191-326 (345)
215 3txo_A PKC-L, NPKC-ETA, protei 99.5 4.5E-15 1.6E-19 145.2 2.2 104 14-155 163-269 (353)
216 3soc_A Activin receptor type-2 99.5 7.4E-15 2.5E-19 142.3 3.5 137 13-166 169-317 (322)
217 3e5z_A Putative gluconolactona 99.5 3.8E-11 1.3E-15 114.6 29.0 239 246-496 21-289 (296)
218 3op5_A Serine/threonine-protei 99.5 2.6E-14 9E-19 141.0 7.0 129 13-168 192-330 (364)
219 2i0e_A Protein kinase C-beta I 99.5 1.1E-14 3.8E-19 142.4 4.2 104 14-155 160-266 (353)
220 2zmd_A Dual specificity protei 99.5 7.5E-15 2.6E-19 146.0 3.0 126 12-161 191-321 (390)
221 3vhe_A Vascular endothelial gr 99.5 7.2E-15 2.5E-19 144.8 2.8 119 13-166 231-354 (359)
222 3l9p_A Anaplastic lymphoma kin 99.5 4.9E-15 1.7E-19 146.2 1.4 121 12-168 221-346 (367)
223 3dsm_A Uncharacterized protein 99.5 2.9E-11 9.9E-16 117.2 28.1 252 270-537 15-301 (328)
224 3pe7_A Oligogalacturonate lyas 99.5 5.7E-12 2E-16 125.2 23.7 265 275-549 13-338 (388)
225 2w4o_A Calcium/calmodulin-depe 99.5 3.7E-15 1.3E-19 146.0 0.5 116 11-160 187-305 (349)
226 3fxz_A Serine/threonine-protei 99.5 8.2E-15 2.8E-19 140.2 2.8 112 14-160 155-269 (297)
227 4f0f_A Serine/threonine-protei 99.5 5.9E-15 2E-19 140.6 1.8 114 14-164 168-286 (287)
228 3no2_A Uncharacterized protein 99.5 2E-11 6.7E-16 115.0 25.9 231 262-505 5-264 (276)
229 3dbq_A Dual specificity protei 99.5 7.7E-15 2.6E-19 143.5 2.6 126 13-161 145-274 (343)
230 4euu_A Serine/threonine-protei 99.5 2.1E-14 7E-19 139.0 5.5 146 9-165 150-307 (319)
231 1rdq_E PKA C-alpha, CAMP-depen 99.5 1.3E-14 4.5E-19 141.8 3.9 100 14-154 180-282 (350)
232 2a2a_A Death-associated protei 99.5 7.9E-15 2.7E-19 142.1 2.3 112 13-160 157-272 (321)
233 1xjd_A Protein kinase C, theta 99.5 1.1E-14 3.7E-19 142.0 3.2 107 14-158 157-267 (345)
234 1fot_A TPK1 delta, CAMP-depend 99.5 1.7E-14 5.8E-19 139.1 4.3 100 14-154 145-247 (318)
235 3lij_A Calcium/calmodulin depe 99.5 8.2E-15 2.8E-19 150.7 2.1 113 12-160 176-291 (494)
236 3f3z_A Calcium/calmodulin-depe 99.5 9.7E-15 3.3E-19 138.3 2.3 114 11-160 145-261 (277)
237 2y7j_A Phosphorylase B kinase 99.5 1.3E-14 4.5E-19 143.0 3.3 114 18-160 245-359 (365)
238 2jii_A Serine/threonine-protei 99.5 4.2E-14 1.5E-18 138.8 6.9 125 13-168 199-337 (352)
239 3sv0_A Casein kinase I-like; t 99.5 3.2E-14 1.1E-18 144.7 6.1 131 9-168 140-279 (483)
240 3g33_A Cell division protein k 99.5 3.5E-14 1.2E-18 136.7 6.0 129 14-160 159-296 (308)
241 3rgf_A Cyclin-dependent kinase 99.5 3.5E-14 1.2E-18 142.2 6.2 145 2-160 159-333 (405)
242 2psq_A Fibroblast growth facto 99.5 1.7E-14 5.8E-19 142.4 3.6 118 13-166 241-363 (370)
243 3dsm_A Uncharacterized protein 99.5 1E-10 3.5E-15 113.4 30.3 238 253-500 44-308 (328)
244 3kk8_A Calcium/calmodulin depe 99.5 1.2E-14 4E-19 138.3 2.3 112 14-160 147-261 (284)
245 4dc2_A Protein kinase C IOTA t 99.5 2.9E-14 1E-18 141.2 5.2 113 14-155 192-307 (396)
246 2x4f_A Myosin light chain kina 99.5 8.4E-15 2.9E-19 144.6 1.2 113 13-160 227-342 (373)
247 4ejn_A RAC-alpha serine/threon 99.5 1.8E-14 6.3E-19 146.1 3.7 103 13-153 287-392 (446)
248 3kex_A Receptor tyrosine-prote 99.5 2E-14 7E-19 139.4 3.8 119 14-168 154-277 (325)
249 3lb7_A RAF proto-oncogene seri 99.5 1.1E-14 3.7E-19 140.1 1.6 126 13-166 170-299 (307)
250 1nxk_A MAP kinase-activated pr 99.4 6.5E-15 2.2E-19 146.9 -0.1 119 12-161 201-322 (400)
251 3poz_A Epidermal growth factor 99.4 1.1E-14 3.9E-19 141.3 1.6 118 14-167 156-278 (327)
252 3mwu_A Calmodulin-domain prote 99.4 1.4E-14 4.6E-19 148.8 2.1 112 13-160 162-276 (486)
253 2eva_A TAK1 kinase - TAB1 chim 99.4 2.2E-14 7.7E-19 137.9 3.3 115 13-166 144-262 (307)
254 2vx3_A Dual specificity tyrosi 99.4 2.3E-14 8E-19 142.3 3.4 60 13-92 199-261 (382)
255 1kob_A Twitchin; kinase, intra 99.4 7.7E-15 2.6E-19 145.3 -0.1 112 14-160 190-304 (387)
256 3lm5_A Serine/threonine-protei 99.4 1.2E-14 4.1E-19 141.1 1.2 113 13-160 172-287 (327)
257 3c4z_A Rhodopsin kinase; Ser/T 99.4 2.1E-14 7.2E-19 147.5 2.8 109 14-156 328-439 (543)
258 3a8x_A Protein kinase C IOTA t 99.4 4E-14 1.4E-18 138.1 4.7 113 14-155 149-264 (345)
259 2c30_A Serine/threonine-protei 99.4 2.2E-14 7.5E-19 138.8 2.5 109 14-160 180-294 (321)
260 2xir_A Vascular endothelial gr 99.4 2.5E-14 8.4E-19 138.3 2.9 119 13-166 186-309 (316)
261 3hko_A Calcium/calmodulin-depe 99.4 2.7E-14 9.4E-19 139.8 3.1 118 13-160 208-330 (345)
262 3lzb_A Epidermal growth factor 99.4 2.5E-14 8.4E-19 138.9 2.6 119 14-167 156-278 (327)
263 2xdw_A Prolyl endopeptidase; a 99.4 5.6E-11 1.9E-15 128.1 29.1 242 250-495 122-416 (710)
264 3ork_A Serine/threonine protei 99.4 2.6E-14 8.9E-19 137.8 2.7 120 14-165 155-279 (311)
265 3pfq_A PKC-B, PKC-beta, protei 99.4 2.5E-14 8.4E-19 151.9 2.8 105 13-155 480-587 (674)
266 3dtc_A Mitogen-activated prote 99.4 1.7E-14 5.7E-19 136.2 1.3 114 13-164 154-270 (271)
267 3nyv_A Calmodulin-domain prote 99.4 9.5E-15 3.2E-19 150.0 -0.5 112 13-160 167-281 (484)
268 3oz6_A Mitogen-activated prote 99.4 4.1E-14 1.4E-18 140.9 4.1 48 31-92 186-234 (388)
269 1t46_A HOMO sapiens V-KIT hard 99.4 2.8E-14 9.7E-19 137.7 2.8 119 13-166 183-306 (313)
270 2h34_A Serine/threonine-protei 99.4 2.8E-14 9.7E-19 137.3 2.8 121 14-168 173-297 (309)
271 2eue_A Carbon catabolite derep 99.4 2.9E-14 1E-18 134.8 2.8 109 14-160 151-262 (275)
272 3is5_A Calcium-dependent prote 99.4 2.1E-14 7.2E-19 136.5 1.7 109 12-160 164-278 (285)
273 3q5i_A Protein kinase; CDPK, m 99.4 2.2E-14 7.5E-19 147.9 1.9 111 14-160 188-301 (504)
274 3fvz_A Peptidyl-glycine alpha- 99.4 1.7E-10 5.9E-15 111.8 29.5 203 250-454 88-321 (329)
275 3v8s_A RHO-associated protein 99.4 1E-13 3.5E-18 138.0 6.7 119 14-161 207-330 (410)
276 4hcu_A Tyrosine-protein kinase 99.4 4.2E-14 1.4E-18 133.2 3.6 117 13-166 144-265 (269)
277 3ttj_A Mitogen-activated prote 99.4 4E-14 1.4E-18 143.8 3.5 61 14-92 203-266 (464)
278 2qkw_B Protein kinase; three-h 99.4 4.8E-14 1.6E-18 136.6 3.9 133 13-166 177-314 (321)
279 1vzo_A Ribosomal protein S6 ki 99.4 4.6E-14 1.6E-18 138.6 3.7 111 13-154 197-310 (355)
280 3niz_A Rhodanese family protei 99.4 3.7E-14 1.3E-18 136.6 2.9 131 14-160 158-300 (311)
281 3tt0_A Basic fibroblast growth 99.4 6.1E-14 2.1E-18 139.2 4.5 118 13-166 229-351 (382)
282 1rjb_A FL cytokine receptor; k 99.4 3E-14 1E-18 139.5 2.2 120 13-166 210-333 (344)
283 3qup_A Tyrosine-protein kinase 99.4 3.3E-14 1.1E-18 137.9 2.4 123 13-171 175-302 (323)
284 2i1m_A Macrophage colony-stimu 99.4 3.8E-14 1.3E-18 138.1 2.8 119 13-166 202-325 (333)
285 3i6u_A CDS1, serine/threonine- 99.4 1.3E-14 4.5E-19 145.7 -0.4 117 12-160 279-399 (419)
286 3og7_A AKAP9-BRAF fusion prote 99.4 6.3E-14 2.2E-18 133.5 4.2 124 14-166 159-287 (289)
287 3kvw_A DYRK2, dual specificity 99.4 4.1E-14 1.4E-18 142.5 3.1 59 14-92 241-302 (429)
288 3bhy_A Death-associated protei 99.4 2.2E-14 7.6E-19 136.3 1.0 112 13-160 150-265 (283)
289 2nru_A Interleukin-1 receptor- 99.4 1.2E-13 4E-18 133.0 6.1 120 14-166 172-305 (307)
290 2acx_A G protein-coupled recep 99.4 3.4E-14 1.2E-18 146.3 2.4 107 13-154 324-433 (576)
291 3a62_A Ribosomal protein S6 ki 99.4 5.4E-14 1.9E-18 136.4 3.7 105 14-156 160-267 (327)
292 2y94_A 5'-AMP-activated protei 99.4 4.5E-14 1.5E-18 143.3 3.3 109 14-160 155-266 (476)
293 2dg1_A DRP35, lactonase; beta 99.4 3.3E-10 1.1E-14 109.9 30.6 244 244-492 36-315 (333)
294 2ivs_A Proto-oncogene tyrosine 99.4 3.7E-14 1.3E-18 136.9 2.5 118 14-167 189-311 (314)
295 3h4j_B AMPK kdaid, SNF1-like p 99.4 5.7E-15 1.9E-19 143.4 -3.4 109 14-160 147-258 (336)
296 3tki_A Serine/threonine-protei 99.4 3E-14 1E-18 137.9 1.6 115 14-160 144-261 (323)
297 3llt_A Serine/threonine kinase 99.4 2.4E-14 8.1E-19 141.2 0.8 59 13-91 200-261 (360)
298 4fr4_A YANK1, serine/threonine 99.4 5.2E-14 1.8E-18 138.9 3.1 109 14-155 154-265 (384)
299 4eut_A Serine/threonine-protei 99.4 1E-13 3.5E-18 138.3 5.1 149 9-168 150-310 (396)
300 3kn6_A Ribosomal protein S6 ki 99.4 3.2E-14 1.1E-18 137.9 1.3 117 13-160 147-270 (325)
301 2pmi_A Negative RE, cyclin-dep 99.4 9.6E-14 3.3E-18 134.1 4.7 128 14-160 147-293 (317)
302 3kmu_A ILK, integrin-linked ki 99.4 5.9E-14 2E-18 132.3 2.9 102 32-166 165-269 (271)
303 3kul_A Ephrin type-A receptor 99.4 5.2E-14 1.8E-18 136.4 2.6 119 13-167 189-313 (325)
304 2dg1_A DRP35, lactonase; beta 99.4 7.4E-11 2.5E-15 114.5 25.0 262 253-528 6-300 (333)
305 2zv2_A Calcium/calmodulin-depe 99.4 6.4E-14 2.2E-18 134.1 3.0 112 14-160 176-292 (298)
306 2yfx_A Tyrosine-protein kinase 99.4 4.3E-14 1.5E-18 137.3 1.8 119 13-167 181-304 (327)
307 2ac3_A MAP kinase-interacting 99.4 3.9E-14 1.3E-18 136.9 1.3 109 32-160 178-295 (316)
308 2jam_A Calcium/calmodulin-depe 99.4 2.9E-14 9.8E-19 137.0 0.3 113 12-160 146-261 (304)
309 1luf_A Muscle-specific tyrosin 99.4 5.5E-14 1.9E-18 137.5 2.3 118 13-166 212-334 (343)
310 3fdn_A Serine/threonine-protei 99.4 9.1E-14 3.1E-18 131.7 3.7 94 32-161 164-258 (279)
311 1ob3_A PFPK5, cell division co 99.4 5.4E-14 1.8E-18 133.9 2.2 115 32-160 157-280 (288)
312 3p1a_A MYT1 kinase, membrane-a 99.4 1.7E-13 5.9E-18 131.9 5.7 106 13-160 195-304 (311)
313 4aw2_A Serine/threonine-protei 99.4 6.8E-14 2.3E-18 140.5 2.8 120 13-160 213-338 (437)
314 1q8y_A SR protein kinase; tran 99.4 1.7E-13 5.9E-18 135.7 5.7 60 13-92 176-238 (373)
315 3gbz_A Kinase, CMGC CDK; ssgci 99.4 7.4E-14 2.5E-18 135.7 2.9 132 13-160 175-318 (329)
316 2eu9_A Dual specificity protei 99.4 8.6E-14 2.9E-18 136.8 3.3 60 12-91 179-241 (355)
317 3q4u_A Activin receptor type-1 99.4 9E-14 3.1E-18 133.3 3.3 128 13-165 151-300 (301)
318 1mp8_A Focal adhesion kinase 1 99.4 7.2E-14 2.5E-18 132.6 2.5 116 14-166 155-275 (281)
319 3t9t_A Tyrosine-protein kinase 99.4 1.1E-13 3.7E-18 130.3 3.6 117 13-166 142-263 (267)
320 2bkl_A Prolyl endopeptidase; m 99.4 2.8E-11 9.5E-16 130.1 22.9 241 250-497 118-401 (695)
321 2wtk_C Serine/threonine-protei 99.4 1.2E-13 4.2E-18 132.7 4.1 96 32-161 168-264 (305)
322 1j1b_A Glycogen synthase kinas 99.4 1.3E-13 4.5E-18 138.5 4.4 122 13-160 195-336 (420)
323 3uim_A Brassinosteroid insensi 99.4 1.3E-13 4.3E-18 134.0 4.0 131 14-166 173-310 (326)
324 3s95_A LIMK-1, LIM domain kina 99.4 1E-13 3.5E-18 133.5 3.1 100 34-166 181-281 (310)
325 3cc6_A Protein tyrosine kinase 99.4 1.1E-13 3.9E-18 131.2 3.4 117 14-166 152-272 (281)
326 3fhr_A MAP kinase-activated pr 99.4 4.2E-14 1.4E-18 137.7 0.2 117 12-160 168-287 (336)
327 3sxs_A Cytoplasmic tyrosine-pr 99.4 8.8E-14 3E-18 131.0 2.4 116 14-166 143-263 (268)
328 1wak_A Serine/threonine-protei 99.4 8.6E-14 2.9E-18 139.1 2.5 59 13-91 234-295 (397)
329 4fvq_A Tyrosine-protein kinase 99.4 1.2E-13 4.1E-18 131.6 3.3 99 34-168 176-276 (289)
330 3gxj_A TGF-beta receptor type- 99.4 4.4E-14 1.5E-18 135.6 0.2 135 13-168 146-298 (303)
331 3uc3_A Serine/threonine-protei 99.4 1.2E-13 4.2E-18 135.8 3.3 98 32-161 174-275 (361)
332 2pvf_A Fibroblast growth facto 99.4 1.1E-13 3.7E-18 134.9 2.9 117 14-166 196-317 (334)
333 1p4o_A Insulin-like growth fac 99.4 1.3E-13 4.4E-18 133.7 3.4 117 14-166 177-298 (322)
334 3cek_A Dual specificity protei 99.4 1.4E-13 4.7E-18 132.9 3.4 125 12-161 163-293 (313)
335 4e7w_A Glycogen synthase kinas 99.4 2.1E-13 7.1E-18 135.8 4.8 122 13-160 180-321 (394)
336 1qcf_A Haematopoetic cell kina 99.4 1.4E-13 4.8E-18 139.8 3.5 118 13-166 322-443 (454)
337 3cbl_A C-FES, proto-oncogene t 99.4 1.1E-13 3.8E-18 137.0 2.7 118 13-166 251-373 (377)
338 2mad_H Methylamine dehydrogena 99.4 2.7E-09 9.4E-14 104.9 34.2 258 273-545 48-356 (373)
339 3brb_A Proto-oncogene tyrosine 99.4 1.2E-13 4.2E-18 133.2 2.9 117 14-166 186-307 (313)
340 2wqm_A Serine/threonine-protei 99.4 1.6E-13 5.5E-18 132.1 3.7 117 14-166 175-296 (310)
341 1cm8_A Phosphorylated MAP kina 99.4 1.7E-13 5.7E-18 135.1 3.8 126 14-160 167-307 (367)
342 3byv_A Rhoptry kinase; malaria 99.4 2.6E-14 8.7E-19 141.7 -2.3 113 13-160 244-359 (377)
343 3q60_A ROP5B; pseudokinase, tr 99.4 2.9E-14 9.8E-19 141.1 -2.2 118 13-160 232-352 (371)
344 2gop_A Trilobed protease; beta 99.4 2.4E-10 8.2E-15 111.5 26.0 218 294-541 16-293 (347)
345 2vgo_A Serine/threonine-protei 99.4 1.7E-13 5.7E-18 130.3 3.2 93 32-160 169-262 (284)
346 3gen_A Tyrosine-protein kinase 99.4 1.9E-13 6.6E-18 129.7 3.7 116 14-166 159-279 (283)
347 3g2f_A Bone morphogenetic prot 99.4 2.2E-13 7.6E-18 132.8 4.1 142 13-166 158-317 (336)
348 3dls_A PAS domain-containing s 99.4 1.3E-13 4.4E-18 134.2 2.3 104 13-160 168-274 (335)
349 2xrw_A Mitogen-activated prote 99.4 2.2E-13 7.4E-18 134.7 4.0 61 14-92 166-229 (371)
350 3qyz_A Mitogen-activated prote 99.4 3.1E-13 1.1E-17 133.2 5.0 132 14-160 167-313 (364)
351 3e3p_A Protein kinase, putativ 99.4 2.9E-13 9.8E-18 133.4 4.8 123 13-160 170-314 (360)
352 3mtl_A Cell division protein k 99.4 2.3E-13 7.8E-18 131.9 3.9 131 14-160 139-281 (324)
353 1u59_A Tyrosine-protein kinase 99.4 1.3E-13 4.4E-18 131.3 2.1 118 14-167 149-272 (287)
354 1z57_A Dual specificity protei 99.4 1.6E-13 5.3E-18 134.0 2.8 45 32-91 191-236 (339)
355 2ycf_A Serine/threonine-protei 99.4 9.5E-14 3.2E-18 134.5 1.2 116 13-160 155-274 (322)
356 2fst_X Mitogen-activated prote 99.4 2.5E-13 8.4E-18 133.8 4.2 127 14-160 171-311 (367)
357 3mi9_A Cell division protein k 99.4 1.4E-13 4.8E-18 135.0 2.3 128 13-160 162-311 (351)
358 1ua2_A CAK, cell division prot 99.4 1.8E-13 6.1E-18 134.0 2.9 132 13-160 150-291 (346)
359 1fmk_A C-SRC, P60-SRC, tyrosin 99.4 2.5E-13 8.5E-18 137.8 4.1 117 13-166 318-439 (452)
360 1xbb_A Tyrosine-protein kinase 99.4 2.1E-13 7E-18 130.1 3.2 117 14-166 156-278 (291)
361 3no2_A Uncharacterized protein 99.3 2.7E-10 9.3E-15 107.2 24.6 236 305-550 5-263 (276)
362 4exu_A Mitogen-activated prote 99.3 2.4E-13 8.3E-18 134.3 3.8 127 14-160 183-323 (371)
363 2qol_A Ephrin receptor; recept 99.3 1.4E-13 5E-18 135.8 2.1 120 13-168 185-310 (373)
364 2y4i_B KSR2, HKSR2, kinase sup 99.3 1.9E-13 6.5E-18 132.2 2.9 110 32-166 191-301 (319)
365 2xdw_A Prolyl endopeptidase; a 99.3 1.5E-09 5.2E-14 116.8 33.7 234 291-538 123-414 (710)
366 3kfa_A Tyrosine-protein kinase 99.3 1.9E-13 6.3E-18 130.2 2.6 117 14-167 150-271 (288)
367 3mdy_A Bone morphogenetic prot 99.3 4.3E-13 1.5E-17 130.8 5.3 131 13-168 180-332 (337)
368 3dzo_A Rhoptry kinase domain; 99.3 6.4E-14 2.2E-18 140.4 -0.8 110 14-159 250-362 (413)
369 2vd5_A DMPK protein; serine/th 99.3 2.1E-13 7.1E-18 135.9 2.9 114 14-154 201-318 (412)
370 1mqb_A Ephrin type-A receptor 99.3 3.6E-13 1.2E-17 131.0 4.5 119 13-167 185-309 (333)
371 1u5q_A Serine/threonine protei 99.3 1.8E-13 6.1E-18 133.8 2.4 112 13-161 192-306 (348)
372 1phk_A Phosphorylase kinase; g 99.3 1.5E-13 5.2E-18 131.5 1.8 118 14-160 163-283 (298)
373 1opk_A P150, C-ABL, proto-onco 99.3 2.2E-13 7.4E-18 139.8 3.1 119 12-167 355-478 (495)
374 3lxl_A Tyrosine-protein kinase 99.3 1.6E-13 5.4E-18 133.3 1.9 133 14-167 166-303 (327)
375 2w5a_A Serine/threonine-protei 99.3 1.4E-13 4.7E-18 130.5 1.3 94 32-161 173-268 (279)
376 2bkl_A Prolyl endopeptidase; m 99.3 5.8E-10 2E-14 119.8 29.7 236 290-538 118-397 (695)
377 3e7e_A HBUB1, BUB1A, mitotic c 99.3 2.2E-13 7.4E-18 134.5 2.7 116 11-166 219-338 (365)
378 2wei_A Calmodulin-domain prote 99.3 9.9E-14 3.4E-18 132.0 0.2 111 14-160 163-276 (287)
379 3o0g_A Cell division protein k 99.3 3.5E-13 1.2E-17 128.6 3.9 131 14-160 140-282 (292)
380 3c5m_A Oligogalacturonate lyas 99.3 4.2E-11 1.4E-15 119.1 19.2 228 257-496 85-387 (396)
381 2owb_A Serine/threonine-protei 99.3 2.4E-13 8.1E-18 132.4 2.6 109 14-160 180-291 (335)
382 1blx_A Cyclin-dependent kinase 99.3 7.6E-13 2.6E-17 128.4 6.2 129 14-160 159-296 (326)
383 2clq_A Mitogen-activated prote 99.3 2.8E-13 9.6E-18 129.5 3.0 114 14-160 162-278 (295)
384 3ugc_A Tyrosine-protein kinase 99.3 4E-13 1.4E-17 128.4 4.0 129 14-166 153-290 (295)
385 4agu_A Cyclin-dependent kinase 99.3 4.5E-13 1.5E-17 129.1 4.3 132 13-160 140-284 (311)
386 1byg_A CSK, protein (C-termina 99.3 2.2E-13 7.5E-18 129.0 2.0 98 33-166 172-272 (278)
387 2buj_A Serine/threonine-protei 99.3 4E-13 1.4E-17 129.8 3.8 104 33-166 201-305 (317)
388 2rku_A Serine/threonine-protei 99.3 2.6E-13 8.9E-18 129.6 2.5 110 14-161 154-266 (294)
389 3lxp_A Non-receptor tyrosine-p 99.3 2.1E-13 7.3E-18 131.7 1.9 128 14-166 173-309 (318)
390 1qpc_A LCK kinase; alpha beta 99.3 2.6E-13 8.9E-18 128.5 2.4 116 14-166 148-268 (279)
391 4e5w_A Tyrosine-protein kinase 99.3 2.2E-13 7.5E-18 130.7 1.9 132 14-166 165-301 (302)
392 3a7i_A MST3 kinase, serine/thr 99.3 3.5E-13 1.2E-17 129.3 3.3 110 14-161 158-271 (303)
393 2h6d_A 5'-AMP-activated protei 99.3 2.6E-13 8.9E-18 128.3 2.3 110 14-161 150-262 (276)
394 3pls_A Macrophage-stimulating 99.3 4.2E-13 1.4E-17 128.4 3.8 117 14-166 163-286 (298)
395 1qks_A Cytochrome CD1 nitrite 99.3 2.5E-09 8.6E-14 110.7 32.2 263 262-538 167-477 (567)
396 3ll6_A Cyclin G-associated kin 99.3 3.6E-13 1.2E-17 131.3 3.2 98 34-166 209-307 (337)
397 1qks_A Cytochrome CD1 nitrite 99.3 1E-08 3.6E-13 106.1 36.7 288 254-547 198-546 (567)
398 4aaa_A Cyclin-dependent kinase 99.3 4.1E-13 1.4E-17 130.6 3.5 125 13-160 162-306 (331)
399 2a19_B Interferon-induced, dou 99.3 6.5E-13 2.2E-17 126.1 4.8 110 14-166 161-273 (284)
400 1t4h_A Serine/threonine-protei 99.3 2.2E-13 7.4E-18 129.9 1.3 93 32-160 187-282 (290)
401 3c1x_A Hepatocyte growth facto 99.3 3.7E-13 1.3E-17 132.7 2.9 120 13-167 230-355 (373)
402 1fvr_A Tyrosine-protein kinase 99.3 3E-13 1E-17 131.3 2.2 99 33-167 199-300 (327)
403 1b6c_B TGF-B superfamily recep 99.3 4.5E-13 1.5E-17 130.9 3.4 130 14-168 186-337 (342)
404 3cok_A Serine/threonine-protei 99.3 1E-13 3.4E-18 131.4 -1.3 92 33-160 170-262 (278)
405 1k9a_A Carboxyl-terminal SRC k 99.3 3.7E-13 1.3E-17 136.5 2.8 114 13-166 327-444 (450)
406 4fl3_A Tyrosine-protein kinase 99.3 4.5E-13 1.5E-17 141.2 3.6 118 13-166 507-630 (635)
407 1u46_A ACK-1, activated CDC42 99.3 3.6E-13 1.2E-17 128.4 2.6 117 14-166 160-283 (291)
408 2qc5_A Streptogramin B lactona 99.3 3.5E-08 1.2E-12 93.6 37.6 277 244-536 11-298 (300)
409 2yex_A Serine/threonine-protei 99.3 2.7E-13 9.2E-18 128.2 1.5 115 14-160 144-261 (276)
410 2x7f_A TRAF2 and NCK-interacti 99.3 3.4E-13 1.2E-17 130.9 2.3 98 32-160 186-286 (326)
411 3f66_A Hepatocyte growth facto 99.3 4.6E-13 1.6E-17 128.1 2.8 118 14-166 167-290 (298)
412 2rio_A Serine/threonine-protei 99.3 6.7E-13 2.3E-17 133.9 4.0 124 13-160 166-295 (434)
413 3eb0_A Putative uncharacterize 99.3 6.9E-13 2.4E-17 131.7 4.0 122 13-160 180-321 (383)
414 2ozo_A Tyrosine-protein kinase 99.3 5.4E-13 1.9E-17 140.2 3.3 118 13-166 474-597 (613)
415 3com_A Serine/threonine-protei 99.3 5.6E-13 1.9E-17 128.6 3.0 109 14-160 164-278 (314)
416 3coi_A Mitogen-activated prote 99.3 1.1E-12 3.8E-17 128.7 5.2 114 32-160 180-305 (353)
417 2h8h_A Proto-oncogene tyrosine 99.3 8.2E-13 2.8E-17 136.8 4.4 117 13-166 401-522 (535)
418 3a99_A Proto-oncogene serine/t 99.3 3.9E-13 1.3E-17 130.0 1.8 103 13-160 188-293 (320)
419 3an0_A Dual specificity mitoge 99.3 1.7E-13 5.9E-18 133.8 -0.7 113 14-160 193-310 (340)
420 2r3i_A Cell division protein k 99.3 1.1E-12 3.6E-17 125.7 4.8 115 32-160 160-283 (299)
421 3sjl_D Methylamine dehydrogena 99.3 3.3E-09 1.1E-13 103.1 29.2 263 271-546 58-370 (386)
422 3e5z_A Putative gluconolactona 99.3 1.3E-09 4.6E-14 103.7 26.2 241 282-545 17-291 (296)
423 3fme_A Dual specificity mitoge 99.3 4.1E-13 1.4E-17 127.9 1.5 114 14-160 149-266 (290)
424 1rwi_B Serine/threonine-protei 99.3 7.2E-10 2.4E-14 103.9 23.6 233 254-495 25-266 (270)
425 3gni_B Strad alpha; kinase fol 99.3 8.6E-13 3E-17 131.3 3.5 47 33-92 193-240 (389)
426 3qd2_B Eukaryotic translation 99.3 6.3E-13 2.1E-17 129.3 2.1 92 32-160 233-325 (332)
427 3eqc_A Dual specificity mitoge 99.3 6.6E-13 2.3E-17 130.8 2.2 114 32-160 187-324 (360)
428 3nsz_A CK II alpha, casein kin 99.3 9.5E-13 3.3E-17 127.9 3.3 59 14-89 170-231 (330)
429 2z2n_A Virginiamycin B lyase; 99.3 4.6E-08 1.6E-12 92.8 36.0 233 249-494 53-296 (299)
430 3p23_A Serine/threonine-protei 99.3 1.6E-13 5.5E-18 138.0 -2.4 117 14-160 162-283 (432)
431 3rp9_A Mitogen-activated prote 99.3 1.5E-12 5.2E-17 132.5 4.8 41 31-85 239-279 (458)
432 3pg1_A Mitogen-activated prote 99.3 1.3E-12 4.3E-17 128.9 3.9 129 14-160 173-316 (362)
433 2j0j_A Focal adhesion kinase 1 99.3 1.1E-12 3.6E-17 138.9 3.5 117 13-166 529-650 (656)
434 2b9h_A MAP kinase FUS3, mitoge 99.3 1.2E-12 4E-17 128.6 3.2 114 32-160 179-305 (353)
435 3n9x_A Phosphotransferase; mal 99.3 2.2E-12 7.6E-17 130.0 4.8 45 31-89 207-252 (432)
436 1yr2_A Prolyl oligopeptidase; 99.3 3.2E-09 1.1E-13 114.8 30.0 240 251-496 161-444 (741)
437 2dyl_A Dual specificity mitoge 99.3 1.2E-12 4E-17 126.5 2.6 114 14-160 164-283 (318)
438 2hz6_A Endoplasmic reticulum t 99.3 1.5E-13 5.1E-18 135.6 -3.9 257 259-537 6-278 (369)
439 1kb0_A Quinohemoprotein alcoho 99.3 2E-09 6.8E-14 114.5 27.4 279 260-548 75-516 (677)
440 3c75_H MADH, methylamine dehyd 99.3 5.7E-09 1.9E-13 103.3 28.7 263 272-546 99-409 (426)
441 1yiq_A Quinohemoprotein alcoho 99.2 6.1E-09 2.1E-13 111.0 30.9 268 233-503 81-515 (689)
442 1yiq_A Quinohemoprotein alcoho 99.2 2.5E-09 8.6E-14 114.0 27.5 280 260-549 68-515 (689)
443 2iwi_A Serine/threonine-protei 99.2 2.1E-12 7.1E-17 124.4 3.3 102 14-160 179-283 (312)
444 2i6l_A Mitogen-activated prote 99.2 2.4E-12 8.1E-17 124.5 3.7 134 13-160 159-305 (320)
445 2w1i_A JAK2; chromosomal rearr 99.2 5.7E-12 2E-16 122.2 6.1 129 14-166 184-321 (326)
446 2j7t_A Serine/threonine-protei 99.2 3.8E-12 1.3E-16 122.0 4.8 101 32-160 174-275 (302)
447 3aln_A Dual specificity mitoge 99.2 2.1E-13 7E-18 132.5 -4.2 116 14-160 165-285 (327)
448 1pjx_A Dfpase, DIISOPROPYLFLUO 99.2 1.8E-08 6.3E-13 96.5 30.0 241 249-494 14-300 (314)
449 2vwi_A Serine/threonine-protei 99.2 2.5E-12 8.4E-17 123.3 1.9 104 32-160 183-287 (303)
450 1kb0_A Quinohemoprotein alcoho 99.2 9.8E-09 3.3E-13 109.2 29.6 269 232-503 87-517 (677)
451 1x8b_A WEE1HU, WEE1-like prote 99.2 2.6E-12 8.9E-17 122.2 1.7 104 13-160 172-279 (289)
452 1yr2_A Prolyl oligopeptidase; 99.2 6.1E-09 2.1E-13 112.6 27.7 234 291-538 161-441 (741)
453 2pml_X PFPK7, Ser/Thr protein 99.2 2.3E-12 7.9E-17 126.2 0.7 124 14-160 191-322 (348)
454 1zy4_A Serine/threonine-protei 99.1 5.9E-12 2E-16 120.6 1.3 96 32-160 187-283 (303)
455 1rwi_B Serine/threonine-protei 99.1 1.7E-08 5.7E-13 94.5 24.2 230 294-538 25-264 (270)
456 3hxj_A Pyrrolo-quinoline quino 99.1 1E-09 3.5E-14 106.2 16.3 275 243-545 10-289 (330)
457 3hrp_A Uncharacterized protein 99.1 1.1E-07 3.9E-12 94.7 31.4 233 253-491 131-408 (409)
458 2mad_H Methylamine dehydrogena 99.1 4.3E-07 1.5E-11 89.1 34.9 242 245-500 60-357 (373)
459 3qa8_A MGC80376 protein; kinas 99.1 8.5E-12 2.9E-16 129.9 0.6 135 13-167 162-309 (676)
460 3hrp_A Uncharacterized protein 99.1 1.1E-07 3.7E-12 94.8 30.3 236 293-536 131-408 (409)
461 2pzi_A Probable serine/threoni 99.1 1.4E-11 4.8E-16 131.6 0.6 104 13-165 219-326 (681)
462 3sjl_D Methylamine dehydrogena 99.1 1.1E-07 3.9E-12 92.3 27.5 251 241-503 68-373 (386)
463 3hxj_A Pyrrolo-quinoline quino 99.1 3E-09 1E-13 102.8 16.4 269 244-538 51-324 (330)
464 2hz6_A Endoplasmic reticulum t 99.0 5.2E-11 1.8E-15 117.3 3.3 183 351-546 8-199 (369)
465 1xip_A Nucleoporin NUP159; bet 99.0 3.6E-09 1.2E-13 103.3 16.0 170 254-442 39-231 (388)
466 1kv9_A Type II quinohemoprotei 99.0 6.5E-08 2.2E-12 102.7 27.1 280 260-549 64-498 (668)
467 2qc5_A Streptogramin B lactona 99.0 1.9E-06 6.4E-11 81.5 33.0 234 247-492 56-299 (300)
468 1kv9_A Type II quinohemoprotei 99.0 6.3E-07 2.2E-11 95.1 31.5 268 233-503 77-498 (668)
469 1xip_A Nucleoporin NUP159; bet 99.0 2.8E-08 9.6E-13 97.0 18.9 168 343-520 40-224 (388)
470 3g4e_A Regucalcin; six bladed 98.9 1.1E-06 3.8E-11 83.4 29.1 223 251-481 11-260 (297)
471 3iuj_A Prolyl endopeptidase; h 98.9 4.2E-07 1.4E-11 97.3 29.1 239 250-497 126-409 (693)
472 1mda_H Methylamine dehydrogena 98.9 1.1E-07 3.8E-12 92.5 21.7 257 273-547 47-354 (368)
473 2ad6_A Methanol dehydrogenase 98.9 1.5E-06 5E-11 90.4 31.5 276 261-548 61-503 (571)
474 3iuj_A Prolyl endopeptidase; h 98.9 4.7E-07 1.6E-11 96.9 28.6 232 291-537 127-404 (693)
475 1pjx_A Dfpase, DIISOPROPYLFLUO 98.9 7.2E-07 2.5E-11 85.2 26.9 238 289-540 14-301 (314)
476 3g4e_A Regucalcin; six bladed 98.9 1.2E-06 4.3E-11 83.1 28.3 222 288-526 8-260 (297)
477 3dr2_A Exported gluconolactona 98.9 4.7E-07 1.6E-11 86.4 24.9 230 246-486 38-300 (305)
478 1w6s_A Methanol dehydrogenase 98.9 1.5E-06 5.2E-11 90.3 30.2 279 261-548 61-512 (599)
479 1flg_A Protein (quinoprotein e 98.8 2.9E-06 9.8E-11 88.3 29.6 281 261-549 67-526 (582)
480 2ad6_A Methanol dehydrogenase 98.8 5.3E-06 1.8E-10 86.2 31.1 242 258-504 111-505 (571)
481 3uqc_A Probable conserved tran 98.8 3.9E-10 1.3E-14 106.8 -0.2 83 69-166 181-264 (286)
482 1flg_A Protein (quinoprotein e 98.8 3.9E-06 1.3E-10 87.3 29.8 269 234-504 80-527 (582)
483 3nol_A Glutamine cyclotransfer 98.8 2.8E-06 9.7E-11 77.1 24.3 187 250-445 38-245 (262)
484 3nok_A Glutaminyl cyclase; bet 98.8 8E-07 2.8E-11 80.6 20.6 181 254-444 56-254 (268)
485 2ghs_A AGR_C_1268P; regucalcin 98.8 9.7E-06 3.3E-10 78.0 29.7 218 255-481 51-290 (326)
486 3c75_H MADH, methylamine dehyd 98.8 2.2E-06 7.6E-11 84.8 25.1 250 239-500 106-409 (426)
487 2qe8_A Uncharacterized protein 98.7 8.2E-07 2.8E-11 86.3 20.8 257 253-531 17-314 (343)
488 3mbr_X Glutamine cyclotransfer 98.7 4.1E-06 1.4E-10 75.4 23.4 186 250-445 16-224 (243)
489 2ghs_A AGR_C_1268P; regucalcin 98.7 9.7E-06 3.3E-10 78.0 27.6 213 294-526 50-290 (326)
490 2iwa_A Glutamine cyclotransfer 98.7 7.3E-06 2.5E-10 75.3 25.0 192 254-454 22-236 (266)
491 4a2l_A BT_4663, two-component 98.7 0.00015 5.2E-09 78.8 39.6 280 252-537 214-525 (795)
492 1w6s_A Methanol dehydrogenase 98.7 9.9E-06 3.4E-10 84.2 28.5 267 233-503 74-513 (599)
493 1mda_H Methylamine dehydrogena 98.7 2.3E-06 8E-11 83.1 21.2 245 239-502 53-355 (368)
494 3dr2_A Exported gluconolactona 98.7 2.1E-06 7.1E-11 81.9 20.6 228 284-532 36-301 (305)
495 1npe_A Nidogen, entactin; glyc 98.6 0.00017 5.8E-09 66.9 31.4 231 263-501 2-246 (267)
496 4a2l_A BT_4663, two-component 98.6 0.00025 8.5E-09 77.1 36.8 275 255-537 175-479 (795)
497 3m2w_A MAP kinase-activated pr 98.6 8.2E-09 2.8E-13 98.4 0.9 83 65-160 173-256 (299)
498 2ece_A 462AA long hypothetical 98.6 0.00017 5.9E-09 70.7 30.5 190 302-492 93-351 (462)
499 2ece_A 462AA long hypothetical 98.5 2.9E-05 9.9E-10 76.1 23.8 215 263-481 97-399 (462)
500 2iwa_A Glutamine cyclotransfer 98.5 7.7E-05 2.6E-09 68.5 24.7 188 347-538 27-237 (266)
No 1
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=1.1e-39 Score=329.21 Aligned_cols=279 Identities=23% Similarity=0.352 Sum_probs=239.9
Q ss_pred EEeecCccceEEEEEc--CCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCC
Q 008820 246 KDLQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFS 323 (552)
Q Consensus 246 ~~l~~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~ 323 (552)
..+.+|.++|++++|+ +++|++|+.||+|++||+.+++...++.+|.+.|.+++|+|++. ++++|+.|++|++||+.
T Consensus 102 ~~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~-~l~sgs~D~~i~iwd~~ 180 (410)
T 1vyh_C 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK-LLASCSADMTIKLWDFQ 180 (410)
T ss_dssp CEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSS-EEEEEETTSCCCEEETT
T ss_pred EeecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCC-EEEEEeCCCeEEEEeCC
Confidence 4578999999999999 89999999999999999999999999999999999999998655 88999999999999998
Q ss_pred CCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe--CCEEEEEeCC
Q 008820 324 FPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC--NGVLYSGSRD 401 (552)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~d 401 (552)
+... +..+..+.. .....+++|++++|++|+.|++|++||+++++++..+.+|...|.++.++ +.++++|+.|
T Consensus 181 ~~~~---~~~~~~h~~--~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D 255 (410)
T 1vyh_C 181 GFEC---IRTMHGHDH--NVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSND 255 (410)
T ss_dssp SSCE---EECCCCCSS--CEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETT
T ss_pred CCce---eEEEcCCCC--CEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCC
Confidence 6543 333333332 22345788899999999999999999999999999999999999999999 3499999999
Q ss_pred CcEEEEECCCCceeEEEecCCCCceEEEEEEcCC--------------------CCEEEEEECCCcEEEEeCC--cceee
Q 008820 402 GTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAV--------------------QHTLVVSHESGSIKVWRND--KFMKS 459 (552)
Q Consensus 402 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~--------------------~~~l~~g~~dg~i~iwd~~--~~~~~ 459 (552)
++|++||+++++....+..+. ..+.+ ++|+|+ +.++++|+.|+.|++||++ .++..
T Consensus 256 ~~v~vwd~~~~~~~~~~~~h~-~~v~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~ 333 (410)
T 1vyh_C 256 QTVRVWVVATKECKAELREHR-HVVEC-ISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMT 333 (410)
T ss_dssp SCEEEEETTTCCEEEEECCCS-SCEEE-EEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEE
T ss_pred CeEEEEECCCCceeeEecCCC-ceEEE-EEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEE
Confidence 999999999999988887653 44444 688886 6789999999999999965 46778
Q ss_pred eecccceEEEEEe--cCCEEEEEeCCCeEEEEecCCCeeeeeeccCCCcccCcceEEEEEeCC--eEEEEeCCCeEEEEE
Q 008820 460 MQTHKGSVFAVFL--EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQG--KLFVGCADRTVKIAL 535 (552)
Q Consensus 460 ~~~h~~~v~~v~~--~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~--~l~s~s~Dg~v~iw~ 535 (552)
+.+|...|.++.| ++++|++|+.||.|++||+.+++....+..+ ...|++++|+++ .|++|+.||+|++|+
T Consensus 334 ~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~~h-----~~~v~~l~~~~~~~~l~sgs~D~~i~vW~ 408 (410)
T 1vyh_C 334 LVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAH-----EHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408 (410)
T ss_dssp EECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEECC-----SSCEEEEEECSSSSCEEEEETTSEEEEEC
T ss_pred EECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEEcCC-----CCcEEEEEEcCCCCEEEEEeCCCcEEEEe
Confidence 8999999999887 7899999999999999999988766655432 667999999964 599999999999998
Q ss_pred ec
Q 008820 536 CN 537 (552)
Q Consensus 536 ~~ 537 (552)
++
T Consensus 409 ~r 410 (410)
T 1vyh_C 409 CR 410 (410)
T ss_dssp --
T ss_pred CC
Confidence 63
No 2
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=5.2e-39 Score=313.10 Aligned_cols=286 Identities=19% Similarity=0.304 Sum_probs=242.2
Q ss_pred CCCeEEEEEeecCccceEEEEEc------CCEEEEEeCCCcEEEEeCCCCeE--EEEEeCCCCCeEEEEEecCCCCEEEE
Q 008820 239 SKGNVKFKDLQGHRDCVTGLAVG------GGFLFSSSFDKSIHVWSLKDFSH--VHTFKGHDHKVMAVVYVDEDQPLCIS 310 (552)
Q Consensus 239 ~~~~~~~~~l~~H~~~V~~l~~s------~~~l~s~s~dg~I~iwd~~~~~~--~~~~~~h~~~v~~v~~~~~~~~~l~s 310 (552)
....+.+..+.+|.++|++++|+ +++|+||+.|++|+|||+.+++. ...+.+|...|.+++|++++. ++++
T Consensus 19 ~~~g~~~~~~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~-~l~s 97 (321)
T 3ow8_A 19 NQYGILFKQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLP-IAAS 97 (321)
T ss_dssp --CEEEEEETTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSS-EEEE
T ss_pred hhhhheeeecccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCC-EEEE
Confidence 44455667789999999999996 46899999999999999987754 457899999999999998654 8899
Q ss_pred EcCCCcEEEEeCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEE
Q 008820 311 GDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAV 390 (552)
Q Consensus 311 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~ 390 (552)
++.|++|++||+.+++....+. .+.. .....+++|++++|++|+.||.|++||+++++....+..|...|.+++|
T Consensus 98 ~s~D~~i~lWd~~~~~~~~~~~---~~~~--~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~ 172 (321)
T 3ow8_A 98 SSLDAHIRLWDLENGKQIKSID---AGPV--DAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAY 172 (321)
T ss_dssp EETTSEEEEEETTTTEEEEEEE---CCTT--CCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEE
T ss_pred EeCCCcEEEEECCCCCEEEEEe---CCCc--cEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEE
Confidence 9999999999998765433332 2211 1123588999999999999999999999999999999999999999999
Q ss_pred e--CCEEEEEeCCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEECCCcEEEEeCC--cceeeeecccce
Q 008820 391 C--NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRND--KFMKSMQTHKGS 466 (552)
Q Consensus 391 ~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~--~~~~~~~~h~~~ 466 (552)
+ +.+|++|+.|+.|++||+++++.+..+..+. ..+.+ ++|+|++++|++|+.|+.|++||.+ +....+.+|...
T Consensus 173 spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~-~~v~~-l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~ 250 (321)
T 3ow8_A 173 SPDGKYLASGAIDGIINIFDIATGKLLHTLEGHA-MPIRS-LTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASW 250 (321)
T ss_dssp CTTSSEEEEEETTSCEEEEETTTTEEEEEECCCS-SCCCE-EEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSC
T ss_pred CCCCCEEEEEcCCCeEEEEECCCCcEEEEEcccC-CceeE-EEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCc
Confidence 9 3499999999999999999999999887663 44444 6999999999999999999999965 466788999999
Q ss_pred EEEEEe--cCCEEEEEeCCCeEEEEecCCCeeeeeeccCCCcccCcceEEEEEeCC--eEEEEeCCCeEEEEEec
Q 008820 467 VFAVFL--EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQG--KLFVGCADRTVKIALCN 537 (552)
Q Consensus 467 v~~v~~--~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~--~l~s~s~Dg~v~iw~~~ 537 (552)
|.+++| ++.+|++++.|++|++||+.++++...+..+ ...|.+++|+++ .|++++.||.|++||++
T Consensus 251 v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h-----~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 251 VLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDH-----QDQVWGVKYNGNGSKIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCC-----SSCEEEEEECTTSSEEEEEETTCCEEEEECC
T ss_pred eEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEEcCC-----CCcEEEEEECCCCCEEEEEeCCCeEEEEeCC
Confidence 999987 8999999999999999999998877665442 667999999953 59999999999999974
No 3
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=7.8e-38 Score=307.68 Aligned_cols=281 Identities=16% Similarity=0.248 Sum_probs=233.8
Q ss_pred EEEEeecCccceEEEEEc--CCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEe
Q 008820 244 KFKDLQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWS 321 (552)
Q Consensus 244 ~~~~l~~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd 321 (552)
....+.+|.+.|++++|+ +++|++|+.||+|++||+.+++.+..+..|...|.+++|+|++. ++++|+.|+.|++||
T Consensus 47 ~~~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~s~~~d~~v~iw~ 125 (340)
T 1got_B 47 TRRTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGN-YVACGGLDNICSIYN 125 (340)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSS-EEEEEETTCEEEEEE
T ss_pred hheeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCC-EEEEEeCCCeEEEEE
Confidence 356789999999999999 89999999999999999999999999999999999999999665 889999999999999
Q ss_pred CCCCCCCc-cccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe--CCEEEEE
Q 008820 322 FSFPLGHE-PLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC--NGVLYSG 398 (552)
Q Consensus 322 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~ 398 (552)
+.+..... ....+..+... .....+++++ .+++++.|++|++||+++++.+..+.+|...|.+++|+ +.++++|
T Consensus 126 ~~~~~~~~~~~~~~~~h~~~--v~~~~~~~~~-~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg 202 (340)
T 1got_B 126 LKTREGNVRVSRELAGHTGY--LSCCRFLDDN-QIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSG 202 (340)
T ss_dssp TTTCSBSCEEEEEEECCSSC--EEEEEEEETT-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEE
T ss_pred CccCCCcceeEEEecCCCcc--EEEEEECCCC-cEEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEE
Confidence 98654322 22233333321 1233455555 58999999999999999999999999999999999999 3499999
Q ss_pred eCCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEECCCcEEEEeCCcc--eeeee--cccceEEEEEe--
Q 008820 399 SRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDKF--MKSMQ--THKGSVFAVFL-- 472 (552)
Q Consensus 399 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~~~--~~~~~--~h~~~v~~v~~-- 472 (552)
+.|++|++||+++++....+..+. ..+.+ ++|+|++++|++|+.||+|++||++.. +..+. .+...|.++.|
T Consensus 203 ~~d~~v~~wd~~~~~~~~~~~~h~-~~v~~-v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~ 280 (340)
T 1got_B 203 ACDASAKLWDVREGMCRQTFTGHE-SDINA-ICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSK 280 (340)
T ss_dssp ETTSCEEEEETTTCSEEEEECCCS-SCEEE-EEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECT
T ss_pred eCCCcEEEEECCCCeeEEEEcCCc-CCEEE-EEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECC
Confidence 999999999999999998887763 44555 699999999999999999999997643 33333 23347888876
Q ss_pred cCCEEEEEeCCCeEEEEecCCCeeeeeeccCCCcccCcceEEEEEeCC--eEEEEeCCCeEEEEE
Q 008820 473 EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQG--KLFVGCADRTVKIAL 535 (552)
Q Consensus 473 ~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~--~l~s~s~Dg~v~iw~ 535 (552)
++++|++|+.||.|++||+.+.+....+.. +...|.+++|+++ .|++|+.||.|+|||
T Consensus 281 ~g~~l~~g~~d~~i~vwd~~~~~~~~~~~~-----h~~~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 281 SGRLLLAGYDDFNCNVWDALKADRAGVLAG-----HDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp TSSEEEEEETTSEEEEEETTTCCEEEEEEC-----CSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred CCCEEEEECCCCeEEEEEcccCcEeeEeec-----CCCcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 899999999999999999988776655543 2678999999964 499999999999996
No 4
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=1.2e-37 Score=301.19 Aligned_cols=280 Identities=18% Similarity=0.281 Sum_probs=233.2
Q ss_pred EEEeecCccceEEEEEc--CCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeC
Q 008820 245 FKDLQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSF 322 (552)
Q Consensus 245 ~~~l~~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~ 322 (552)
..+|.+|.+.|++++|+ +++|++|+.||+|++||+.+++.+..+..|..+|.+++|+|++. ++++|+.|++|++||+
T Consensus 6 ~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~s~s~d~~i~vwd~ 84 (304)
T 2ynn_A 6 KKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKN-WIIVGSDDFRIRVFNY 84 (304)
T ss_dssp EEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGT-EEEEEETTSEEEEEET
T ss_pred EEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCC-EEEEECCCCEEEEEEC
Confidence 45689999999999999 99999999999999999999999999999999999999999655 7899999999999999
Q ss_pred CCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCC-ceeEEecCCCCCeEEEEEeC---CEEEEE
Q 008820 323 SFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDG-TLSCTMSGHKSAVSTLAVCN---GVLYSG 398 (552)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~-~~~~~~~~h~~~v~~l~~~~---~~l~s~ 398 (552)
.++.... .+..+.. .....+++|++++|++|+.||+|++||++++ .....+.+|...|.+++|++ ..|++|
T Consensus 85 ~~~~~~~---~~~~h~~--~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg 159 (304)
T 2ynn_A 85 NTGEKVV---DFEAHPD--YIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASG 159 (304)
T ss_dssp TTCCEEE---EEECCSS--CEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEE
T ss_pred CCCcEEE---EEeCCCC--cEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEE
Confidence 8765433 3333332 1234578899999999999999999999887 55677899999999999983 389999
Q ss_pred eCCCcEEEEECCCCceeEEEecCCCCceEEEEEEcC--CCCEEEEEECCCcEEEEeCC--cceeeeecccceEEEEEe--
Q 008820 399 SRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTA--VQHTLVVSHESGSIKVWRND--KFMKSMQTHKGSVFAVFL-- 472 (552)
Q Consensus 399 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~--~~~~l~~g~~dg~i~iwd~~--~~~~~~~~h~~~v~~v~~-- 472 (552)
+.|++|++||++++.....+..++...+.. +.++| ++.+|++|+.|++|++||.+ +++..+.+|...|.++.|
T Consensus 160 s~D~~v~iwd~~~~~~~~~~~~~~~~~v~~-~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p 238 (304)
T 2ynn_A 160 CLDRTVKVWSLGQSTPNFTLTTGQERGVNY-VDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHP 238 (304)
T ss_dssp ETTSEEEEEETTCSSCSEEEECCCTTCEEE-EEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECS
T ss_pred eCCCeEEEEECCCCCccceeccCCcCcEEE-EEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCCEEEEEECC
Confidence 999999999999888877776655444544 46655 77899999999999999965 467889999999998887
Q ss_pred cCCEEEEEeCCCeEEEEecCCCeeeeeeccCCCcccCcceEEEEEeC-C---eEEEEeCCCeEEEEEec
Q 008820 473 EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQ-G---KLFVGCADRTVKIALCN 537 (552)
Q Consensus 473 ~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~~-~---~l~s~s~Dg~v~iw~~~ 537 (552)
++.+|++|+.||+|++||+.+.++...+... ...+.+++++| + .+++|+ |..+.+|++.
T Consensus 239 ~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~asg~-~~g~~~~~~~ 301 (304)
T 2ynn_A 239 TLPIIISGSEDGTLKIWNSSTYKVEKTLNVG-----LERSWCIATHPTGRKNYIASGF-DNGFTVLSLG 301 (304)
T ss_dssp SSSEEEEEETTSCEEEEETTTCCEEEEECCS-----SSSEEEEEECTTCGGGCEEEEE-TTEEEEEECC
T ss_pred CCCEEEEEcCCCeEEEEECCCCceeeeccCC-----CccEEEEEECCCCCceEEEEec-CCceEEEEec
Confidence 8889999999999999999998877665432 55689999885 3 255555 4557777765
No 5
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=5.6e-37 Score=303.13 Aligned_cols=282 Identities=19% Similarity=0.233 Sum_probs=234.6
Q ss_pred EEEEeecCccceEEEEEc--CCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEe
Q 008820 244 KFKDLQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWS 321 (552)
Q Consensus 244 ~~~~l~~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd 321 (552)
....+.+|.+.|++++|+ +++|+||+.||+|++||..+++....+..|...|.+++|+|++. ++++++.|+.+++|+
T Consensus 56 ~~~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~-~lasg~~d~~i~v~~ 134 (354)
T 2pbi_B 56 TRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGC-AIACGGLDNKCSVYP 134 (354)
T ss_dssp EEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSS-EEEEESTTSEEEEEE
T ss_pred EEEEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCC-EEEEeeCCCCEEEEE
Confidence 356789999999999999 89999999999999999999999999999999999999999765 789999999999999
Q ss_pred CCCCCCCc---cccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe----CCE
Q 008820 322 FSFPLGHE---PLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC----NGV 394 (552)
Q Consensus 322 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~----~~~ 394 (552)
+....... .......+.. .....+++++++.|++|+.|++|++||+++++++..+.+|...|.+++++ +++
T Consensus 135 ~~~~~~~~~~~~~~~~~~h~~--~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~ 212 (354)
T 2pbi_B 135 LTFDKNENMAAKKKSVAMHTN--YLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNT 212 (354)
T ss_dssp CCCCTTCCSGGGCEEEEECSS--CEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCE
T ss_pred EeccccccccccceeeeccCC--cEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCE
Confidence 87543221 1122222222 22345778888999999999999999999999999999999999999997 249
Q ss_pred EEEEeCCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEECCCcEEEEeCCcc--eeeeec--ccceEEEE
Q 008820 395 LYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDKF--MKSMQT--HKGSVFAV 470 (552)
Q Consensus 395 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~~~--~~~~~~--h~~~v~~v 470 (552)
|++|+.||+|++||+++++++..+..+. ..+.+ ++|+|++++|++|+.|++|++||++.. ...+.. +...+.++
T Consensus 213 l~sgs~Dg~v~~wd~~~~~~~~~~~~h~-~~v~~-v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~ 290 (354)
T 2pbi_B 213 FVSGGCDKKAMVWDMRSGQCVQAFETHE-SDVNS-VRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSV 290 (354)
T ss_dssp EEEEETTSCEEEEETTTCCEEEEECCCS-SCEEE-EEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEE
T ss_pred EEEEeCCCeEEEEECCCCcEEEEecCCC-CCeEE-EEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEE
Confidence 9999999999999999999998887663 44555 699999999999999999999997653 333333 33467777
Q ss_pred Ee--cCCEEEEEeCCCeEEEEecCCCeeeeeeccCCCcccCcceEEEEEeCC--eEEEEeCCCeEEEEE
Q 008820 471 FL--EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQG--KLFVGCADRTVKIAL 535 (552)
Q Consensus 471 ~~--~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~--~l~s~s~Dg~v~iw~ 535 (552)
.| ++.+|++|+.|+.|++||+.+++....+.. +...|++++|+|+ .|++|+.||+|++|+
T Consensus 291 ~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~-----h~~~v~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 291 DFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFG-----HENRVSTLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp EECTTSSEEEEEETTSCEEEEETTTCSEEEEECC-----CSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred EEeCCCCEEEEEECCCcEEEEECCCCceEEEEEC-----CCCcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence 66 899999999999999999988766554433 3678999999964 499999999999996
No 6
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=7.9e-38 Score=309.53 Aligned_cols=285 Identities=17% Similarity=0.187 Sum_probs=220.7
Q ss_pred eecCccceEEEEEc--CCEEEEEeC------CCcEEEEeCCCCeEE----EEEeCCCCCeEEEEEecCCCCEEEEEcCCC
Q 008820 248 LQGHRDCVTGLAVG--GGFLFSSSF------DKSIHVWSLKDFSHV----HTFKGHDHKVMAVVYVDEDQPLCISGDSGG 315 (552)
Q Consensus 248 l~~H~~~V~~l~~s--~~~l~s~s~------dg~I~iwd~~~~~~~----~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg 315 (552)
..+|++.|++++|+ |++|++|+. |++|++|+..++... ....+|...|.+++|+|++ .+++++.||
T Consensus 38 p~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~--~~l~~s~dg 115 (357)
T 4g56_B 38 PACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEK--GILVASDSG 115 (357)
T ss_dssp --CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTT--EEEEEETTS
T ss_pred cccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCC--CEEEEECCC
Confidence 35799999999999 999999997 788999998776542 3345689999999999975 356788899
Q ss_pred cEEEEeCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe-C--
Q 008820 316 GIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC-N-- 392 (552)
Q Consensus 316 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~-~-- 392 (552)
+|++||+.+++...........+. ......+++|++++|++|+.||.|++||+++++++..+.+|...|++++|+ +
T Consensus 116 ~v~lWd~~~~~~~~~~~~~~~~h~-~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~ 194 (357)
T 4g56_B 116 AVELWEILEKESLLVNKFAKYEHD-DIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKD 194 (357)
T ss_dssp CEEEC--------CCCCEEECCCS-SCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCS
T ss_pred EEEEeeccccceeEEEeeccCCCC-CCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCC
Confidence 999999987654433222111111 122345788999999999999999999999999999999999999999998 2
Q ss_pred CEEEEEeCCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCC-CCEEEEEECCCcEEEEeCC--cceeeeecccceEEE
Q 008820 393 GVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAV-QHTLVVSHESGSIKVWRND--KFMKSMQTHKGSVFA 469 (552)
Q Consensus 393 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~-~~~l~~g~~dg~i~iwd~~--~~~~~~~~h~~~v~~ 469 (552)
.++++++.|++|++||+++++....+...........++|+|+ +.++++|+.|+.|++||++ +....+.+|...|.+
T Consensus 195 ~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~ 274 (357)
T 4g56_B 195 TIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQNITG 274 (357)
T ss_dssp SCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSSCEEE
T ss_pred ceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEeccceeEEE
Confidence 3899999999999999999988776654433333444689987 5689999999999999965 467888999999999
Q ss_pred EEe--cC-CEEEEEeCCCeEEEEecCCCeeeeeeccCCCcccCcceEEEEEeC---CeEEEEeCCCeEEEEEecCCcc
Q 008820 470 VFL--EG-KWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQ---GKLFVGCADRTVKIALCNRQIP 541 (552)
Q Consensus 470 v~~--~~-~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~~---~~l~s~s~Dg~v~iw~~~~~~~ 541 (552)
+.| ++ ++|++|+.|++|++||++++++..... +...|++++|+| ..|++|+.||+|++|+++...+
T Consensus 275 l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~~------H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~~~ 346 (357)
T 4g56_B 275 LAYSYHSSPFLASISEDCTVAVLDADFSEVFRDLS------HRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPSEGR 346 (357)
T ss_dssp EEECSSSSCCEEEEETTSCEEEECTTSCEEEEECC------CSSCEEEEEECSSSTTEEEEEETTSCEEEEECC----
T ss_pred EEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEECC------CCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCc
Confidence 987 54 689999999999999999887765532 367899999985 3599999999999999975443
No 7
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=6.6e-38 Score=307.78 Aligned_cols=278 Identities=17% Similarity=0.194 Sum_probs=219.5
Q ss_pred cCccceEEEEEc--CCEEEEEeCCCcEEEEeCCC-----------CeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCc
Q 008820 250 GHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKD-----------FSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGG 316 (552)
Q Consensus 250 ~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~-----------~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~ 316 (552)
.|...|.+++|+ |++|++++ |+++|+||... .........|...|.+++|+|++ .+++|+.||+
T Consensus 28 ~~~~~v~~~~fs~dG~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~--~l~~~s~dg~ 104 (344)
T 4gqb_B 28 CMERQLEAARYRSDGALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGER--GILVASDSGA 104 (344)
T ss_dssp SCCSEEEEEEECTTSCEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETTT--EEEEEETTSE
T ss_pred cccCCEEEEEECCCCCEEEEEe-CCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCCC--eEEEEECCCE
Confidence 577889999999 88888887 77888887321 01111222356789999999964 5789999999
Q ss_pred EEEEeCCCCCCCccccccc-cCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe-C--
Q 008820 317 IFVWSFSFPLGHEPLKKWN-EEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC-N-- 392 (552)
Q Consensus 317 i~vwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~-~-- 392 (552)
|++||+++++......... .|.. . ....+|++++++|++|+.||+|++||+++++++..+.+|...|++++|+ +
T Consensus 105 v~lWd~~~~~~~~~~~~~~~~H~~-~-V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~ 182 (344)
T 4gqb_B 105 VELWELDENETLIVSKFCKYEHDD-I-VSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKD 182 (344)
T ss_dssp EEEEEECTTSSCEEEEEEEECCSS-C-EEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSCT
T ss_pred EEEEeccCCCceeEeeccccCCCC-C-EEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCceEEEEecCCCC
Confidence 9999999876554433222 2222 2 2345788999999999999999999999999999999999999999998 3
Q ss_pred CEEEEEeCCCcEEEEECCCCceeEEEecCCCCceEEEEEEcC-CCCEEEEEECCCcEEEEeCC--cceeeeecccceEEE
Q 008820 393 GVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTA-VQHTLVVSHESGSIKVWRND--KFMKSMQTHKGSVFA 469 (552)
Q Consensus 393 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~-~~~~l~~g~~dg~i~iwd~~--~~~~~~~~h~~~v~~ 469 (552)
.++++++.|++|++||+++++....+.....+.....++++| +++++++|+.||.|++||.+ +++..+.+|...|.+
T Consensus 183 ~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~v~~ 262 (344)
T 4gqb_B 183 SVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQCVTG 262 (344)
T ss_dssp TEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCSSCEEE
T ss_pred CceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCCCCEEE
Confidence 378999999999999999999888876544444444468887 46789999999999999965 578889999999999
Q ss_pred EEe--cC-CEEEEEeCCCeEEEEecCCCeeeeeeccCCCcccCcceEEEEEeC-C--eEEEEeCCCeEEEEEecC
Q 008820 470 VFL--EG-KWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQ-G--KLFVGCADRTVKIALCNR 538 (552)
Q Consensus 470 v~~--~~-~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~~-~--~l~s~s~Dg~v~iw~~~~ 538 (552)
+.| ++ ++|++|+.|++|++||+.++++.... .|...|++++|+| + .|++|+.||+|++|+++.
T Consensus 263 v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~~~~------~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~ 331 (344)
T 4gqb_B 263 LVFSPHSVPFLASLSEDCSLAVLDSSLSELFRSQ------AHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPT 331 (344)
T ss_dssp EEECSSSSCCEEEEETTSCEEEECTTCCEEEEEC------CCSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC
T ss_pred EEEccCCCeEEEEEeCCCeEEEEECCCCcEEEEc------CCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCC
Confidence 987 55 58999999999999999988765432 2367799999995 2 367899999999999974
No 8
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=6.1e-37 Score=297.54 Aligned_cols=284 Identities=21% Similarity=0.365 Sum_probs=237.9
Q ss_pred eEEEEEeecCccceEEEEEc--CCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEE
Q 008820 242 NVKFKDLQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFV 319 (552)
Q Consensus 242 ~~~~~~l~~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~v 319 (552)
......+.+|.+.|++++|+ +++|++|+.||.|++|++.+++....+.+|...|.+++|+|++ .++++++.|+.|++
T Consensus 13 ~~~~~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~s~~~d~~i~v 91 (312)
T 4ery_A 13 YALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS-NLLVSASDDKTLKI 91 (312)
T ss_dssp CEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTS-SEEEEEETTSEEEE
T ss_pred ceeEEEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCC-CEEEEECCCCEEEE
Confidence 34567799999999999999 8999999999999999999999999999999999999999965 58899999999999
Q ss_pred EeCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe--CCEEEE
Q 008820 320 WSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC--NGVLYS 397 (552)
Q Consensus 320 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s 397 (552)
||++++.... .+..+.. .....+++++++++++|+.||.|++||+++++.+..+..|..+|.+++|+ +.++++
T Consensus 92 wd~~~~~~~~---~~~~~~~--~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 166 (312)
T 4ery_A 92 WDVSSGKCLK---TLKGHSN--YVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVS 166 (312)
T ss_dssp EETTTCCEEE---EEECCSS--CEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEE
T ss_pred EECCCCcEEE---EEcCCCC--CEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEE
Confidence 9998765333 2333322 12345788899999999999999999999999999999999999999999 349999
Q ss_pred EeCCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEECCCcEEEEeCCc--ceeeeecccceEEE----EE
Q 008820 398 GSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDK--FMKSMQTHKGSVFA----VF 471 (552)
Q Consensus 398 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~~--~~~~~~~h~~~v~~----v~ 471 (552)
++.||.|++||+++++.+..+...+...+.. ++|+|+++++++++.||.|++||+.+ ....+.+|.....+ ..
T Consensus 167 ~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (312)
T 4ery_A 167 SSYDGLCRIWDTASGQCLKTLIDDDNPPVSF-VKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFS 245 (312)
T ss_dssp EETTSCEEEEETTTCCEEEEECCSSCCCEEE-EEECTTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEE
T ss_pred EeCCCcEEEEECCCCceeeEEeccCCCceEE-EEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCceEEEEEEEE
Confidence 9999999999999999888876655444544 79999999999999999999999764 56677777654322 22
Q ss_pred e-cCCEEEEEeCCCeEEEEecCCCeeeeeeccCCCcccCcceEEEEEeCC--eEEEEe--CCCeEEEEEec
Q 008820 472 L-EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQG--KLFVGC--ADRTVKIALCN 537 (552)
Q Consensus 472 ~-~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~--~l~s~s--~Dg~v~iw~~~ 537 (552)
+ ++.+|++|+.||.|++||+.+++....+..+ ...|.+++|+|+ .+++++ .|+.|++|+.+
T Consensus 246 ~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h-----~~~v~~~~~~p~~~~l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 246 VTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGH-----TDVVISTACHPTENIIASAALENDKTIKLWKSD 311 (312)
T ss_dssp CSSSCEEEECCTTSCEEEEETTTCCEEEEECCC-----SSCEEEEEECSSSSEEEEEECTTTCCEEEEECC
T ss_pred eCCCcEEEEECCCCEEEEEECCCchhhhhhhcc-----CCcEEEEeecCcCCceEEEEccCCccEEEecCC
Confidence 2 7889999999999999999988776665443 667999999963 478776 69999999975
No 9
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=1.5e-37 Score=310.43 Aligned_cols=293 Identities=22% Similarity=0.280 Sum_probs=233.9
Q ss_pred CeEEEEEeecCccceEEEEEc--CCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEE
Q 008820 241 GNVKFKDLQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIF 318 (552)
Q Consensus 241 ~~~~~~~l~~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~ 318 (552)
.......|.||.+.|++++|+ +++|+||+.||+|+|||+.+++....+..|...|.+++|+|++. ++++|+.|+.++
T Consensus 55 ~~~~~~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~-~las~~~d~~v~ 133 (380)
T 3iz6_a 55 DLVCCRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQ-SVACGGLDSACS 133 (380)
T ss_dssp CCEEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSS-EEEECCSSSCCE
T ss_pred eeEEeecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCC-EEEEeeCCCcEE
Confidence 344678899999999999999 89999999999999999999999999999999999999999765 789999999999
Q ss_pred EEeCCCCCCC----ccccccccCCCceeeeEEEEeeC-CCEEEEeeCCCcEEEEECCCCceeEEe-----cCCCCCeEEE
Q 008820 319 VWSFSFPLGH----EPLKKWNEEKDWRYSGIHALTTS-GRYLYTGSGDRTIKAWSLLDGTLSCTM-----SGHKSAVSTL 388 (552)
Q Consensus 319 vwd~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~-~~~l~sgs~dg~i~iwd~~~~~~~~~~-----~~h~~~v~~l 388 (552)
+||+.+.... .....+..+... .. ...+.++ +..|++|+.|++|++||+++++.+..+ .+|...|.++
T Consensus 134 iw~~~~~~~~~~~~~~~~~~~gh~~~-v~-~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~ 211 (380)
T 3iz6_a 134 IFNLSSQADRDGNMPVSRVLTGHKGY-AS-SCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSL 211 (380)
T ss_dssp EEECCCCSSCCCSSTTCCBCCCCSSC-CC-CCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEE
T ss_pred EEECCCCccccCCccceeeccCCCcc-eE-EEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEE
Confidence 9999754321 122223333321 11 2244554 457999999999999999999998877 6799999999
Q ss_pred EEe---CCEEEEEeCCCcEEEEECC-CCceeEEEecCCCCceEEEEEEcCCCCEEEEEECCCcEEEEeCCc--ceeeeec
Q 008820 389 AVC---NGVLYSGSRDGTIRLWSLS-DHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDK--FMKSMQT 462 (552)
Q Consensus 389 ~~~---~~~l~s~~~dg~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~~--~~~~~~~ 462 (552)
+++ ++++++|+.|++|++||++ .++.+..+..| .+.+.+ ++|+|++++|++|+.||+|++||+++ .+..+..
T Consensus 212 ~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h-~~~v~~-v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~ 289 (380)
T 3iz6_a 212 SINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGH-EGDINS-VKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNR 289 (380)
T ss_dssp EECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCC-SSCCCE-EEECTTSSEEEEECSSSCEEEEETTTTEEEEEECC
T ss_pred EeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCc-CCCeEE-EEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecc
Confidence 997 3599999999999999998 45677777765 455555 69999999999999999999999764 3444443
Q ss_pred cc-------ceEEEEEe--cCCEEEEEeCCCeEEEEecCCCeeeeeeccCCCcccCcceEEEEEeCC--eEEEEeCCCeE
Q 008820 463 HK-------GSVFAVFL--EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQG--KLFVGCADRTV 531 (552)
Q Consensus 463 h~-------~~v~~v~~--~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~--~l~s~s~Dg~v 531 (552)
+. ..|.+++| +|++|++|+.||.|++||+..++........ ...+...|++++|+++ .|++|+.||+|
T Consensus 290 ~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~-~~~h~~~v~~l~~s~dg~~l~sgs~D~~i 368 (380)
T 3iz6_a 290 EPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTL-QNSHEGRISCLGLSSDGSALCTGSWDKNL 368 (380)
T ss_dssp CCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCS-CSSCCCCCCEEEECSSSSEEEEECTTSCE
T ss_pred cccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecc-cCCCCCceEEEEECCCCCEEEEeeCCCCE
Confidence 32 23666665 8999999999999999999887665544221 1124678999999953 59999999999
Q ss_pred EEEEecCC
Q 008820 532 KIALCNRQ 539 (552)
Q Consensus 532 ~iw~~~~~ 539 (552)
++|++...
T Consensus 369 ~iW~~~~~ 376 (380)
T 3iz6_a 369 KIWAFSGH 376 (380)
T ss_dssp EEEECCSS
T ss_pred EEEecCCC
Confidence 99999743
No 10
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=1.5e-36 Score=322.40 Aligned_cols=324 Identities=15% Similarity=0.190 Sum_probs=256.4
Q ss_pred CCCccccceeeecCcc-eEEEeeCCCeEEEEE---------eecCccceEEEEEc--CCEEEEEeCCCcEEEEeCCCCeE
Q 008820 217 SDGADIDQARAAGGVK-DLVNGLSKGNVKFKD---------LQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSH 284 (552)
Q Consensus 217 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~---------l~~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~~~ 284 (552)
.+...+..+.+.+.+. .++++..++.+++|+ +.+|.+.|++++|+ +++|++|+.|++|++||+.+++.
T Consensus 145 gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~ 224 (611)
T 1nr0_A 145 GQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTK 224 (611)
T ss_dssp CCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCE
T ss_pred CCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcE
Confidence 3445688889988876 599999999999886 57899999999999 89999999999999999999999
Q ss_pred EEEEe-------CCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEE
Q 008820 285 VHTFK-------GHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYT 357 (552)
Q Consensus 285 ~~~~~-------~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s 357 (552)
+..+. +|.+.|.+++|+|++. +|++++.|++|++||+.+++....+...... ......+.++++.+++
T Consensus 225 ~~~~~~~~~~~~~h~~~V~~v~~spdg~-~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~s 299 (611)
T 1nr0_A 225 TGVFEDDSLKNVAHSGSVFGLTWSPDGT-KIASASADKTIKIWNVATLKVEKTIPVGTRI----EDQQLGIIWTKQALVS 299 (611)
T ss_dssp EEECBCTTSSSCSSSSCEEEEEECTTSS-EEEEEETTSEEEEEETTTTEEEEEEECCSSG----GGCEEEEEECSSCEEE
T ss_pred eeeeccccccccccCCCEEEEEECCCCC-EEEEEeCCCeEEEEeCCCCceeeeecCCCCc----cceeEEEEEcCCEEEE
Confidence 98884 7999999999999665 7899999999999999876543333211111 1123345558889999
Q ss_pred eeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe--CCEEEEEeCCCcEEEEECCCCceeEEEecCC-------------
Q 008820 358 GSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC--NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDS------------- 422 (552)
Q Consensus 358 gs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~------------- 422 (552)
++.|+.+++||..++++...+.+|...|++++|+ +.+|++++.|++|++||+.+++....+...+
T Consensus 300 ~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~ 379 (611)
T 1nr0_A 300 ISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKG 379 (611)
T ss_dssp EETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTS
T ss_pred EeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeeecccCCcceEEEEEECCCC
Confidence 9999999999999999888999999999999999 3499999999999999998765433220000
Q ss_pred ------------------------------------------C-------------------------CceEEEEEEcCC
Q 008820 423 ------------------------------------------S-------------------------GAVSSVLSLTAV 435 (552)
Q Consensus 423 ------------------------------------------~-------------------------~~~~~~~~~s~~ 435 (552)
. ......++|+|+
T Consensus 380 ~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~va~spd 459 (611)
T 1nr0_A 380 DLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSND 459 (611)
T ss_dssp CEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEEECTT
T ss_pred cEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceeeeecCCCceEEEEeCC
Confidence 0 001234689999
Q ss_pred CCEEEEEECCCcEEEEeCCcc----eeeeecccceEEEEEe--cCCEEEEEeCCCeEEEEecCC-CeeeeeeccCCCccc
Q 008820 436 QHTLVVSHESGSIKVWRNDKF----MKSMQTHKGSVFAVFL--EGKWLFTGGWDKTVSVQELAG-DEFEEDVIPTGAIPC 508 (552)
Q Consensus 436 ~~~l~~g~~dg~i~iwd~~~~----~~~~~~h~~~v~~v~~--~~~~l~sgs~dg~i~iwd~~~-~~~~~~~~~~~~~~~ 508 (552)
+++|++|+.|++|++||+... ... .+|...|.+++| +|++|++++.|++|++||+.+ +++...... ..|
T Consensus 460 g~~lasgs~D~~v~lwd~~~~~~~~~~~-~~h~~~v~~v~fspdg~~las~s~d~~v~~w~~~~~~~~~~~~~~---~~H 535 (611)
T 1nr0_A 460 KQFVAVGGQDSKVHVYKLSGASVSEVKT-IVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSW---TFH 535 (611)
T ss_dssp SCEEEEEETTSEEEEEEEETTEEEEEEE-EECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEESCCCCC---CCC
T ss_pred CCEEEEeCCCCeEEEEEccCCceeeeec-cCCCCceEEEEECCCCCEEEEEcCCCCEEEEEcCCCCceeeeeee---eec
Confidence 999999999999999996532 233 679999999987 999999999999999999986 444322111 114
Q ss_pred CcceEEEEEeCC--eEEEEeCCCeEEEEEecCCccee-EEEecc
Q 008820 509 GSVITALLYWQG--KLFVGCADRTVKIALCNRQIPEI-FSLLLH 549 (552)
Q Consensus 509 ~~~v~~l~~~~~--~l~s~s~Dg~v~iw~~~~~~~~~-~~~~gh 549 (552)
...|.+++|+|+ .|++|+.|++|++|+++.....+ ..+.+|
T Consensus 536 ~~~V~~v~fspdg~~lasgs~D~~v~lW~~~~~~~~~~~~~~~h 579 (611)
T 1nr0_A 536 TAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAH 579 (611)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEETTCTTSCCEEETTSS
T ss_pred ccceeEEEECCCCCEEEEEECCCcEEEEECCCcccccchhhccC
Confidence 778999999963 59999999999999998544333 556677
No 11
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.5e-36 Score=295.56 Aligned_cols=288 Identities=19% Similarity=0.259 Sum_probs=221.0
Q ss_pred EEEEeecCccceEEEEEcCCEEEEEeCCCcEEEEeCCCC--eEEEEE-eC-CCCCeEEEEEecCCCCEEEEEcCCCcEEE
Q 008820 244 KFKDLQGHRDCVTGLAVGGGFLFSSSFDKSIHVWSLKDF--SHVHTF-KG-HDHKVMAVVYVDEDQPLCISGDSGGGIFV 319 (552)
Q Consensus 244 ~~~~l~~H~~~V~~l~~s~~~l~s~s~dg~I~iwd~~~~--~~~~~~-~~-h~~~v~~v~~~~~~~~~l~s~~~dg~i~v 319 (552)
.+..+.+|.++|++++|++++|++|+.|++|++||+.++ +....+ .+ |...|.+++|+|++ .+|++|+.|++|++
T Consensus 6 ~~~~~~~h~~~v~~~~~s~~~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~-~~las~s~D~~v~i 84 (330)
T 2hes_X 6 LIKSLKLYKEKIWSFDFSQGILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHT-SLLAAGSFDSTVSI 84 (330)
T ss_dssp EEEEEECCSSCEEEEEEETTEEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTS-SEEEEEETTSCEEE
T ss_pred cceeeccCCCceeeeccCCCEEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCC-CEEEEEeCCCcEEE
Confidence 567899999999999999779999999999999999875 556666 44 99999999999975 48899999999999
Q ss_pred EeCCCCCC----CccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCC----CceeEEecCCCCCeEEEEEe
Q 008820 320 WSFSFPLG----HEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLD----GTLSCTMSGHKSAVSTLAVC 391 (552)
Q Consensus 320 wd~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~----~~~~~~~~~h~~~v~~l~~~ 391 (552)
||+..... ......+..+.. .....+|+|++++|++|+.|++|++||++. .+++..+.+|...|.+++|+
T Consensus 85 w~~~~~~~~~~~~~~~~~~~~h~~--~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~ 162 (330)
T 2hes_X 85 WAKEESADRTFEMDLLAIIEGHEN--EVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWH 162 (330)
T ss_dssp EEC-------CCCEEEEEEC------CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEEC
T ss_pred EEcccCcCccccceeEEEEcCCCC--cEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEEC
Confidence 99864321 122233333332 223457888999999999999999999943 25677889999999999999
Q ss_pred --CCEEEEEeCCCcEEEEECCCC--ceeEEEecCCCCceEEEEEEcCC--CCEEEEEECCCcEEEEeCCc----------
Q 008820 392 --NGVLYSGSRDGTIRLWSLSDH--SLLTVLEEDSSGAVSSVLSLTAV--QHTLVVSHESGSIKVWRNDK---------- 455 (552)
Q Consensus 392 --~~~l~s~~~dg~i~iwd~~~~--~~~~~~~~~~~~~~~~~~~~s~~--~~~l~~g~~dg~i~iwd~~~---------- 455 (552)
+.+|++++.|++|++||.+++ +++..+..| .+.+.+ +.|+|+ +..|++|+.|++|++||...
T Consensus 163 p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h-~~~v~~-~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~ 240 (330)
T 2hes_X 163 PSEALLASSSYDDTVRIWKDYDDDWECVAVLNGH-EGTVWS-SDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWV 240 (330)
T ss_dssp SSSSEEEEEETTSCEEEEEEETTEEEEEEEECCC-SSCEEE-EEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEE
T ss_pred CCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCC-CCcEEE-EEecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeE
Confidence 349999999999999999876 566777665 455555 689998 77899999999999999642
Q ss_pred ceeeeec-ccceEEEEEe-cCCEEEEEeCCCeEEEEecCCCeeeeeeccCCCcccCc-ceEEEEEeC---C-eEEEEeCC
Q 008820 456 FMKSMQT-HKGSVFAVFL-EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGS-VITALLYWQ---G-KLFVGCAD 528 (552)
Q Consensus 456 ~~~~~~~-h~~~v~~v~~-~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~~-~v~~l~~~~---~-~l~s~s~D 528 (552)
....+.. |...|.++.| ++.+|++++.||.|++||..+++........ ..+.. .|.+++|++ + .|++|+.|
T Consensus 241 ~~~~~~~~h~~~v~~v~~s~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~--~~h~~~~v~~v~~~~~~~~~~las~s~D 318 (330)
T 2hes_X 241 CEAILPDVHKRQVYNVAWGFNGLIASVGADGVLAVYEEVDGEWKVFAKRA--LCHGVYEINVVKWLELNGKTILATGGDD 318 (330)
T ss_dssp EEEECCSCCSSCEEEEEECTTSCEEEEETTSCEEEEEEETTEEEEEEEES--CTTTTSCEEEEEEC-----CCEEEEETT
T ss_pred EeeecccccccceEEEEEcCCCEEEEEeCCCEEEEEEcCCCceEEEeccc--cccccceEEEEEEecCCCceEEEEecCC
Confidence 2334444 8999999998 5668999999999999999876432211110 01233 799999986 2 49999999
Q ss_pred CeEEEEEecC
Q 008820 529 RTVKIALCNR 538 (552)
Q Consensus 529 g~v~iw~~~~ 538 (552)
|+|++|+++.
T Consensus 319 g~v~~W~~~~ 328 (330)
T 2hes_X 319 GIVNFWSLEK 328 (330)
T ss_dssp SEEEEEEC--
T ss_pred CcEEEEEecc
Confidence 9999999863
No 12
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=4.2e-36 Score=295.90 Aligned_cols=293 Identities=18% Similarity=0.212 Sum_probs=228.2
Q ss_pred CeEEEEEeecCcc-ceEEEEEc--CCEEEEEeCCCcEEEEeCCCCeEEE--E-EeCCCCCeEEEEEecCCCCEEEEEcCC
Q 008820 241 GNVKFKDLQGHRD-CVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVH--T-FKGHDHKVMAVVYVDEDQPLCISGDSG 314 (552)
Q Consensus 241 ~~~~~~~l~~H~~-~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~~~~~--~-~~~h~~~v~~v~~~~~~~~~l~s~~~d 314 (552)
.-..+..+.+|.+ .|++++|+ +++|++|+.|++|+|||+.++.... . ..+|...|.+++|+|++. +|++|+.|
T Consensus 4 ~~~~~~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~-~l~s~s~D 82 (345)
T 3fm0_A 4 SLVLLGRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGN-YLASASFD 82 (345)
T ss_dssp CEEEEEEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSS-EEEEEETT
T ss_pred cEEEeeeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCC-EEEEEECC
Confidence 3456788999988 99999999 9999999999999999998876432 2 268999999999999655 88999999
Q ss_pred CcEEEEeCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCc---eeEEecCCCCCeEEEEEe
Q 008820 315 GGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGT---LSCTMSGHKSAVSTLAVC 391 (552)
Q Consensus 315 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~---~~~~~~~h~~~v~~l~~~ 391 (552)
+++++||+..... ..+..+..+.. .....+++|++++|++|+.|++|++||++++. ++..+.+|...|.+++|+
T Consensus 83 ~~v~iw~~~~~~~-~~~~~~~~h~~--~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~ 159 (345)
T 3fm0_A 83 ATTCIWKKNQDDF-ECVTTLEGHEN--EVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWH 159 (345)
T ss_dssp SCEEEEEECCC-E-EEEEEECCCSS--CEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEEC
T ss_pred CcEEEEEccCCCe-EEEEEccCCCC--CceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEEC
Confidence 9999999875431 22333333332 12345788899999999999999999998763 466788999999999999
Q ss_pred --CCEEEEEeCCCcEEEEECCCCce--eEEEecCCCCceEEEEEEcCCCCEEEEEECCCcEEEEeCCc------------
Q 008820 392 --NGVLYSGSRDGTIRLWSLSDHSL--LTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDK------------ 455 (552)
Q Consensus 392 --~~~l~s~~~dg~i~iwd~~~~~~--~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~~------------ 455 (552)
+.+|++++.|++|++||.++++. ...+..| ...+.+ ++|+|++++|++|+.|++|++||...
T Consensus 160 p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h-~~~v~~-l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~ 237 (345)
T 3fm0_A 160 PSQELLASASYDDTVKLYREEEDDWVCCATLEGH-ESTVWS-LAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGS 237 (345)
T ss_dssp SSSSCEEEEETTSCEEEEEEETTEEEEEEEECCC-SSCEEE-EEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC--
T ss_pred CCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCC-CCceEE-EEECCCCCEEEEEeCCCeEEEeccccCCCCccceeecc
Confidence 34999999999999999988764 3455554 455555 69999999999999999999998421
Q ss_pred -----ceeeeec-ccceEEEEEe--cCCEEEEEeCCCeEEEEecCCCeeee----eeccCCCcccCcceEEEEEeCC---
Q 008820 456 -----FMKSMQT-HKGSVFAVFL--EGKWLFTGGWDKTVSVQELAGDEFEE----DVIPTGAIPCGSVITALLYWQG--- 520 (552)
Q Consensus 456 -----~~~~~~~-h~~~v~~v~~--~~~~l~sgs~dg~i~iwd~~~~~~~~----~~~~~~~~~~~~~v~~l~~~~~--- 520 (552)
++..+.+ |...|.++.| ++..|++++.|+.|++|+........ .........+...|++++|+|+
T Consensus 238 ~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~ 317 (345)
T 3fm0_A 238 DPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPG 317 (345)
T ss_dssp -CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSSTT
T ss_pred CCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCCCce
Confidence 1223343 8889999988 78899999999999999987542111 0110001124678999999963
Q ss_pred eEEEEeCCCeEEEEEecCC
Q 008820 521 KLFVGCADRTVKIALCNRQ 539 (552)
Q Consensus 521 ~l~s~s~Dg~v~iw~~~~~ 539 (552)
.|++|+.||+|++|++...
T Consensus 318 ~laS~s~Dg~v~~W~~~~~ 336 (345)
T 3fm0_A 318 LLASCSDDGEVAFWKYQRP 336 (345)
T ss_dssp EEEEEETTSCEEEEEECC-
T ss_pred EEEEcCCCCcEEEEEecCC
Confidence 6999999999999999843
No 13
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=1.9e-36 Score=305.51 Aligned_cols=267 Identities=23% Similarity=0.426 Sum_probs=234.2
Q ss_pred CCccccceeeecCcceEEEeeCCCeEEEEE---------eecCccceEEEEEc--CCEEEEEeCCCcEEEEeCCCCeEEE
Q 008820 218 DGADIDQARAAGGVKDLVNGLSKGNVKFKD---------LQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVH 286 (552)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------l~~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~~~~~ 286 (552)
+...+..+.+.+.+..++++..++.+++|+ +.+|.+.|++++|+ +++|++|+.|++|++||+.+++++.
T Consensus 107 h~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~ 186 (410)
T 1vyh_C 107 HRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIR 186 (410)
T ss_dssp CSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEE
T ss_pred cCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeE
Confidence 445688999999999999999999999997 56899999999999 8999999999999999999999999
Q ss_pred EEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEE
Q 008820 287 TFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKA 366 (552)
Q Consensus 287 ~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~i 366 (552)
++.+|...|.+++|+|++. ++++|+.|++|++||+.++... ..+..+... .....++++++++++|+.|++|++
T Consensus 187 ~~~~h~~~V~~v~~~p~~~-~l~s~s~D~~i~~wd~~~~~~~---~~~~~h~~~--v~~~~~~~~g~~l~s~s~D~~v~v 260 (410)
T 1vyh_C 187 TMHGHDHNVSSVSIMPNGD-HIVSASRDKTIKMWEVQTGYCV---KTFTGHREW--VRMVRPNQDGTLIASCSNDQTVRV 260 (410)
T ss_dssp CCCCCSSCEEEEEECSSSS-EEEEEETTSEEEEEETTTCCEE---EEEECCSSC--EEEEEECTTSSEEEEEETTSCEEE
T ss_pred EEcCCCCCEEEEEEeCCCC-EEEEEeCCCeEEEEECCCCcEE---EEEeCCCcc--EEEEEECCCCCEEEEEcCCCeEEE
Confidence 9999999999999999655 7899999999999999876543 333333322 233567888999999999999999
Q ss_pred EECCCCceeEEecCCCCCeEEEEEeC---------------------C-EEEEEeCCCcEEEEECCCCceeEEEecCCCC
Q 008820 367 WSLLDGTLSCTMSGHKSAVSTLAVCN---------------------G-VLYSGSRDGTIRLWSLSDHSLLTVLEEDSSG 424 (552)
Q Consensus 367 wd~~~~~~~~~~~~h~~~v~~l~~~~---------------------~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~ 424 (552)
||+.++++...+.+|...|.+++|++ + ++++|+.|++|++||+++++++..+..| ..
T Consensus 261 wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h-~~ 339 (410)
T 1vyh_C 261 WVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGH-DN 339 (410)
T ss_dssp EETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECC-SS
T ss_pred EECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEECC-CC
Confidence 99999999999999999999999983 2 7999999999999999999999998876 34
Q ss_pred ceEEEEEEcCCCCEEEEEECCCcEEEEeCC--cceeeeecccceEEEEEe--cCCEEEEEeCCCeEEEEecC
Q 008820 425 AVSSVLSLTAVQHTLVVSHESGSIKVWRND--KFMKSMQTHKGSVFAVFL--EGKWLFTGGWDKTVSVQELA 492 (552)
Q Consensus 425 ~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~--~~~~~~~~h~~~v~~v~~--~~~~l~sgs~dg~i~iwd~~ 492 (552)
.+.+ ++|+|++++|++|+.||.|++||.. +++..+.+|...|.++.| ++.+|++|+.||+|++|+++
T Consensus 340 ~v~~-v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~sgs~D~~i~vW~~r 410 (410)
T 1vyh_C 340 WVRG-VLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410 (410)
T ss_dssp CEEE-EEECSSSSCEEEEETTTEEEEECCTTSCCCEEEECCSSCEEEEEECSSSSCEEEEETTSEEEEEC--
T ss_pred cEEE-EEEcCCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCC
Confidence 5555 6999999999999999999999964 567889999999999988 78899999999999999863
No 14
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=1.2e-35 Score=289.29 Aligned_cols=283 Identities=21% Similarity=0.355 Sum_probs=228.4
Q ss_pred EEEEeecCccceEEEEEc---CCEEEEEeCCCcEEEEeCCC-----CeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCC
Q 008820 244 KFKDLQGHRDCVTGLAVG---GGFLFSSSFDKSIHVWSLKD-----FSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGG 315 (552)
Q Consensus 244 ~~~~l~~H~~~V~~l~~s---~~~l~s~s~dg~I~iwd~~~-----~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg 315 (552)
...+|.||.++|++++|+ +++|+||+.|++|++||+.+ +.++..+.+|...|.+++|+|++. ++++|+.|+
T Consensus 9 l~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~-~l~s~s~D~ 87 (319)
T 3frx_A 9 LRGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGA-YALSASWDK 87 (319)
T ss_dssp EEEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSS-EEEEEETTS
T ss_pred EEEEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCC-EEEEEeCCC
Confidence 345799999999999998 47999999999999999853 346788999999999999999655 789999999
Q ss_pred cEEEEeCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEeCC--
Q 008820 316 GIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVCNG-- 393 (552)
Q Consensus 316 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~-- 393 (552)
+|++||+.+++.. ..+..+... ....+++++++++++|+.|++|++||++ ++++..+.+|...|.++.+.+.
T Consensus 88 ~v~~wd~~~~~~~---~~~~~h~~~--v~~~~~~~~~~~l~s~s~D~~i~vwd~~-~~~~~~~~~h~~~v~~~~~~~~~~ 161 (319)
T 3frx_A 88 TLRLWDVATGETY---QRFVGHKSD--VMSVDIDKKASMIISGSRDKTIKVWTIK-GQCLATLLGHNDWVSQVRVVPNEK 161 (319)
T ss_dssp EEEEEETTTTEEE---EEEECCSSC--EEEEEECTTSCEEEEEETTSCEEEEETT-SCEEEEECCCSSCEEEEEECCC--
T ss_pred EEEEEECCCCCee---EEEccCCCc--EEEEEEcCCCCEEEEEeCCCeEEEEECC-CCeEEEEeccCCcEEEEEEccCCC
Confidence 9999999876433 333333321 2234678888999999999999999985 5677888999999999999731
Q ss_pred ------EEEEEeCCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEECCCcEEEEeCCc--ceeeeecccc
Q 008820 394 ------VLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDK--FMKSMQTHKG 465 (552)
Q Consensus 394 ------~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~~--~~~~~~~h~~ 465 (552)
.+++++.|++|++||+++++....+..| ...+.+ ++++|++++|++|+.||.|++||+.. .+..+.. ..
T Consensus 162 ~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h-~~~v~~-~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~-~~ 238 (319)
T 3frx_A 162 ADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGH-NSNINT-LTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSA-QD 238 (319)
T ss_dssp ----CCEEEEEETTSCEEEEETTTTEEEEEECCC-CSCEEE-EEECTTSSEEEEEETTCEEEEEETTTTEEEEEEEC-CS
T ss_pred CCCCccEEEEEeCCCEEEEEECCcchhheeecCC-CCcEEE-EEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecC-CC
Confidence 7999999999999999999888888766 345555 69999999999999999999999764 4555554 45
Q ss_pred eEEEEEe--cCCEEEEEeCCCeEEEEecCCCeeeeeeccCC---CcccCcceEEEEEeCC--eEEEEeCCCeEEEEEec
Q 008820 466 SVFAVFL--EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTG---AIPCGSVITALLYWQG--KLFVGCADRTVKIALCN 537 (552)
Q Consensus 466 ~v~~v~~--~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~---~~~~~~~v~~l~~~~~--~l~s~s~Dg~v~iw~~~ 537 (552)
.|.++.| ++.+|++++. +.+++|++............. ...+...+.+++|+|+ .|++|+.||.|++|++.
T Consensus 239 ~v~~~~~sp~~~~la~~~~-~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg~i~vWd~~ 316 (319)
T 3frx_A 239 EVFSLAFSPNRYWLAAATA-TGIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQVM 316 (319)
T ss_dssp CEEEEEECSSSSEEEEEET-TEEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEETTSCEEEEEEE
T ss_pred cEEEEEEcCCCCEEEEEcC-CCcEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCCEEEEeecCceEEEEEEe
Confidence 7888876 8889988875 469999998776554433221 1123556899999963 59999999999999986
No 15
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=2.3e-35 Score=301.30 Aligned_cols=298 Identities=21% Similarity=0.325 Sum_probs=253.7
Q ss_pred ecCcceEEEeeCCCeEEEEE---------eecCccceEEEEEcCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEE
Q 008820 228 AGGVKDLVNGLSKGNVKFKD---------LQGHRDCVTGLAVGGGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAV 298 (552)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~---------l~~H~~~V~~l~~s~~~l~s~s~dg~I~iwd~~~~~~~~~~~~h~~~v~~v 298 (552)
...++.++++..++.+.+|+ +.+|.+.|++++|+++++++|+.||+|++||+.+++.+..+.+|...|.++
T Consensus 126 ~~~g~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~ 205 (445)
T 2ovr_B 126 QFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCM 205 (445)
T ss_dssp EEETTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEE
T ss_pred EEcCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCEEEEEecCCEEEEEeCCCeEEEEECCcCcEEEEECCCCCcEEEE
Confidence 33568899999999999887 568999999999999999999999999999999999999999999999999
Q ss_pred EEecCCCCEEEEEcCCCcEEEEeCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCceeEEe
Q 008820 299 VYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTM 378 (552)
Q Consensus 299 ~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~ 378 (552)
.|++ ..+++|+.||+|++||+.+++....+ ..+. ..+.++.++++.+++|+.||.|++||+++++++..+
T Consensus 206 ~~~~---~~l~s~s~dg~i~~wd~~~~~~~~~~---~~~~----~~v~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 275 (445)
T 2ovr_B 206 HLHE---KRVVSGSRDATLRVWDIETGQCLHVL---MGHV----AAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTL 275 (445)
T ss_dssp EEET---TEEEEEETTSEEEEEESSSCCEEEEE---ECCS----SCEEEEEECSSCEEEEETTSCEEEEEGGGTEEEEEE
T ss_pred EecC---CEEEEEeCCCEEEEEECCCCcEEEEE---cCCc----ccEEEEEECCCEEEEEcCCCEEEEEECCCCcEeEEe
Confidence 9953 47899999999999999876543332 2222 245567778999999999999999999999999999
Q ss_pred cCCCCCeEEEEEeCCEEEEEeCCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEECCCcEEEEeCC--cc
Q 008820 379 SGHKSAVSTLAVCNGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRND--KF 456 (552)
Q Consensus 379 ~~h~~~v~~l~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~--~~ 456 (552)
.+|...|.++.|.+..+++++.|+.|++||+++++.+..+..+. ..+. ++.++++++++|+.||.|++||.+ +.
T Consensus 276 ~~~~~~v~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~-~~v~---~~~~~~~~l~~~~~dg~i~vwd~~~~~~ 351 (445)
T 2ovr_B 276 QGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQ-SLTS---GMELKDNILVSGNADSTVKIWDIKTGQC 351 (445)
T ss_dssp CCCSSCEEEEEECSSEEEEEETTSCEEEEETTTCCEEEEECCCC-SCEE---EEEEETTEEEEEETTSCEEEEETTTCCE
T ss_pred cCCCCceEEEEECCCEEEEEeCCCeEEEEECCCCCEEEEEcCCc-ccEE---EEEEeCCEEEEEeCCCeEEEEECCCCcE
Confidence 99999999999977799999999999999999999998887653 3332 444568899999999999999965 45
Q ss_pred eeeeec---ccceEEEEEecCCEEEEEeCCCeEEEEecCCCeeeeeeccCCCcccCcceEEEEEeCCe--EEEEeCCCe-
Q 008820 457 MKSMQT---HKGSVFAVFLEGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQGK--LFVGCADRT- 530 (552)
Q Consensus 457 ~~~~~~---h~~~v~~v~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~--l~s~s~Dg~- 530 (552)
+..+.. |...|.++.+++++|++|+.||.|++||+.+++....+.......+...|.+++|+|+. +++|+.||+
T Consensus 352 ~~~~~~~~~~~~~v~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~~ 431 (445)
T 2ovr_B 352 LQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTE 431 (445)
T ss_dssp EEEECSTTSCSSCEEEEEECSSEEEEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSS
T ss_pred EEEEccCCCCCCCEEEEEECCCEEEEEeCCCeEEEEECCCCceeeeeeccccCCCCceEEEEEecCCEEEEEEcccCCCC
Confidence 666665 88999999999999999999999999999998877666433333457789999999754 789999997
Q ss_pred ---EEEEEecCC
Q 008820 531 ---VKIALCNRQ 539 (552)
Q Consensus 531 ---v~iw~~~~~ 539 (552)
|.+||++..
T Consensus 432 ~~~l~v~df~~~ 443 (445)
T 2ovr_B 432 ETKLLVLDFDVD 443 (445)
T ss_dssp CCEEEEEECCCC
T ss_pred ccEEEEEECCCC
Confidence 999999854
No 16
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.2e-35 Score=289.33 Aligned_cols=267 Identities=20% Similarity=0.325 Sum_probs=229.0
Q ss_pred CCccccceeeecC----cceEEEeeCCCeEEEEE-----------eecCccceEEEEEc--CCEEEEEeCCCcEEEEeCC
Q 008820 218 DGADIDQARAAGG----VKDLVNGLSKGNVKFKD-----------LQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLK 280 (552)
Q Consensus 218 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~-----------l~~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~ 280 (552)
+...+..+.+++. +..++++..++.+++|+ +.+|...|.+++|+ +.++++++.|++|++||+.
T Consensus 31 H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~ 110 (321)
T 3ow8_A 31 HDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLE 110 (321)
T ss_dssp SSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEETT
T ss_pred CCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECC
Confidence 3445777777653 56799999999999886 56899999999999 8899999999999999999
Q ss_pred CCeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeC
Q 008820 281 DFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSG 360 (552)
Q Consensus 281 ~~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~ 360 (552)
+++.+..+..|...+.+++|+|++. ++++++.||.|++||++++.....+. .+. ......+++|++++|++|+.
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~spdg~-~l~~g~~dg~v~i~~~~~~~~~~~~~---~~~--~~v~~~~~spdg~~lasg~~ 184 (321)
T 3ow8_A 111 NGKQIKSIDAGPVDAWTLAFSPDSQ-YLATGTHVGKVNIFGVESGKKEYSLD---TRG--KFILSIAYSPDGKYLASGAI 184 (321)
T ss_dssp TTEEEEEEECCTTCCCCEEECTTSS-EEEEECTTSEEEEEETTTCSEEEEEE---CSS--SCEEEEEECTTSSEEEEEET
T ss_pred CCCEEEEEeCCCccEEEEEECCCCC-EEEEEcCCCcEEEEEcCCCceeEEec---CCC--ceEEEEEECCCCCEEEEEcC
Confidence 9999999999999999999999765 78999999999999998765433222 221 12234578999999999999
Q ss_pred CCcEEEEECCCCceeEEecCCCCCeEEEEEe--CCEEEEEeCCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCE
Q 008820 361 DRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC--NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHT 438 (552)
Q Consensus 361 dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ 438 (552)
||.|++||+++++.+..+.+|..+|++++|+ +.+|++|+.|++|++||+++++....+..+. ..+.. ++|+|++.+
T Consensus 185 dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~-~~v~~-~~~sp~~~~ 262 (321)
T 3ow8_A 185 DGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHA-SWVLN-VAFCPDDTH 262 (321)
T ss_dssp TSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCS-SCEEE-EEECTTSSE
T ss_pred CCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCC-CceEE-EEECCCCCE
Confidence 9999999999999999999999999999999 3499999999999999999999988887763 44555 699999999
Q ss_pred EEEEECCCcEEEEeCC--cceeeeecccceEEEEEe--cCCEEEEEeCCCeEEEEecC
Q 008820 439 LVVSHESGSIKVWRND--KFMKSMQTHKGSVFAVFL--EGKWLFTGGWDKTVSVQELA 492 (552)
Q Consensus 439 l~~g~~dg~i~iwd~~--~~~~~~~~h~~~v~~v~~--~~~~l~sgs~dg~i~iwd~~ 492 (552)
|++++.|++|++||++ +++..+.+|...|.++.| ++++|++++.||.|++||..
T Consensus 263 l~s~s~D~~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 263 FVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCCEEEEECC
T ss_pred EEEEeCCCcEEEEeCCCCEEEEEEcCCCCcEEEEEECCCCCEEEEEeCCCeEEEEeCC
Confidence 9999999999999965 567788899999999988 78999999999999999963
No 17
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=5.1e-35 Score=310.62 Aligned_cols=304 Identities=16% Similarity=0.184 Sum_probs=244.7
Q ss_pred cccceeeecCcceEEEeeCCCeEEEEE---------eecCccceEEEEEc--CCEEEEEeCCCcEEEEeCCCC--eEEEE
Q 008820 221 DIDQARAAGGVKDLVNGLSKGNVKFKD---------LQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDF--SHVHT 287 (552)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---------l~~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~--~~~~~ 287 (552)
....+.++++++.++++. ++.+.+|+ +.+|.+.|++++|+ |++||+|+.|++|+|||+.++ .....
T Consensus 20 ~~~~~~~spdg~~l~~~~-~~~v~l~~~~~~~~~~~~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~ 98 (611)
T 1nr0_A 20 TAVVLGNTPAGDKIQYCN-GTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTT 98 (611)
T ss_dssp CCCCCEECTTSSEEEEEE-TTEEEEEETTCSSCCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEE
T ss_pred ceeEEeeCCCCCEEEeCC-CCEEEEecCCCcccCeEecCCCCceEEEEECCCCcEEEEEeCCCCEEEeECCCCcceeeEe
Confidence 355677888888888876 45778876 56899999999999 999999999999999998754 45667
Q ss_pred EeCCCCCeEEEEEecCCCCEEEEEcCC----CcEEEEeCCCCCCCccccccccCCCceeeeEEEEeeCCC-EEEEeeCCC
Q 008820 288 FKGHDHKVMAVVYVDEDQPLCISGDSG----GGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGR-YLYTGSGDR 362 (552)
Q Consensus 288 ~~~h~~~v~~v~~~~~~~~~l~s~~~d----g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~sgs~dg 362 (552)
+.+|.+.|.+++|+|++..+ ++++.+ +.|++||.. .. ...+..+.. .....+|+|++. .|++|+.|+
T Consensus 99 ~~~~~~~v~~v~fs~dg~~l-~~~~~~~~~~~~v~~wd~~--~~---~~~l~gh~~--~v~~v~f~p~~~~~l~s~s~D~ 170 (611)
T 1nr0_A 99 IPVFSGPVKDISWDSESKRI-AAVGEGRERFGHVFLFDTG--TS---NGNLTGQAR--AMNSVDFKPSRPFRIISGSDDN 170 (611)
T ss_dssp EECSSSCEEEEEECTTSCEE-EEEECCSSCSEEEEETTTC--CB---CBCCCCCSS--CEEEEEECSSSSCEEEEEETTS
T ss_pred ecccCCceEEEEECCCCCEE-EEEECCCCceeEEEEeeCC--CC---cceecCCCC--CceEEEECCCCCeEEEEEeCCC
Confidence 89999999999999987754 555543 478888743 22 223333332 223457888876 699999999
Q ss_pred cEEEEECCCCceeEEecCCCCCeEEEEEe-C-CEEEEEeCCCcEEEEECCCCceeEEEec------CCCCceEEEEEEcC
Q 008820 363 TIKAWSLLDGTLSCTMSGHKSAVSTLAVC-N-GVLYSGSRDGTIRLWSLSDHSLLTVLEE------DSSGAVSSVLSLTA 434 (552)
Q Consensus 363 ~i~iwd~~~~~~~~~~~~h~~~v~~l~~~-~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~------~~~~~~~~~~~~s~ 434 (552)
+|++||..++++...+.+|...|++++|+ + .+|++++.|++|++||+.+++.+..+.. .|.+.+.+ ++|+|
T Consensus 171 ~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~-v~~sp 249 (611)
T 1nr0_A 171 TVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFG-LTWSP 249 (611)
T ss_dssp CEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEE-EEECT
T ss_pred eEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEE-EEECC
Confidence 99999999999999999999999999999 3 4999999999999999999998888743 34556666 69999
Q ss_pred CCCEEEEEECCCcEEEEeCCc--c-------------------------------------------eeeeecccceEEE
Q 008820 435 VQHTLVVSHESGSIKVWRNDK--F-------------------------------------------MKSMQTHKGSVFA 469 (552)
Q Consensus 435 ~~~~l~~g~~dg~i~iwd~~~--~-------------------------------------------~~~~~~h~~~v~~ 469 (552)
++++|++++.|++|++||..+ . ...+.+|...|.+
T Consensus 250 dg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~ 329 (611)
T 1nr0_A 250 DGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITA 329 (611)
T ss_dssp TSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEE
T ss_pred CCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEE
Confidence 999999999999999999653 1 1234579999999
Q ss_pred EEe--cCCEEEEEeCCCeEEEEecCCCeeeeeeccCCCcccCcceEEEEEeC-CeEEEEeCCCeEEEEEecC
Q 008820 470 VFL--EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQ-GKLFVGCADRTVKIALCNR 538 (552)
Q Consensus 470 v~~--~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~~-~~l~s~s~Dg~v~iw~~~~ 538 (552)
+++ ++++|++++.|++|++||+.++........ .+...|.+++|++ +.+++++.|+.+++|+...
T Consensus 330 l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~----~h~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~ 397 (611)
T 1nr0_A 330 LSSSADGKTLFSADAEGHINSWDISTGISNRVFPD----VHATMITGIKTTSKGDLFTVSWDDHLKVVPAGG 397 (611)
T ss_dssp EEECTTSSEEEEEETTSCEEEEETTTCCEEECSSC----SCSSCEEEEEECTTSCEEEEETTTEEEEECSSS
T ss_pred EEEeCCCCEEEEEeCCCcEEEEECCCCceeeeccc----CCcceEEEEEECCCCcEEEEEcCCceEEeecCC
Confidence 987 899999999999999999998766543311 2366799999985 5699999999999999763
No 18
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=4.3e-35 Score=294.08 Aligned_cols=280 Identities=20% Similarity=0.281 Sum_probs=226.6
Q ss_pred EEEeecCccceEEEEEc--CCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCC------------------CeEEEEEecCC
Q 008820 245 FKDLQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDH------------------KVMAVVYVDED 304 (552)
Q Consensus 245 ~~~l~~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~~~~~~~~~h~~------------------~v~~v~~~~~~ 304 (552)
+....+|.+.|++++|+ |++|++|+ |+++++|++.+++.+..+..|.. .|.+++|+|++
T Consensus 57 ~~~~~~h~~~V~~v~fspdg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg 135 (393)
T 1erj_A 57 LHKSLDHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDG 135 (393)
T ss_dssp EEEEEECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTS
T ss_pred eEEecCCCCEEEEEEECCCCCEEEEEc-CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCC
Confidence 33444799999999999 89999987 68999999999999888876542 38999999966
Q ss_pred CCEEEEEcCCCcEEEEeCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCceeEEecCCCCC
Q 008820 305 QPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSA 384 (552)
Q Consensus 305 ~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~ 384 (552)
. ++++|+.|++|++||+.+++.. ..+..+.. .....++++++++|++|+.|++|++||++++++...+. +...
T Consensus 136 ~-~l~s~~~d~~i~iwd~~~~~~~---~~~~~h~~--~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~-~~~~ 208 (393)
T 1erj_A 136 K-FLATGAEDRLIRIWDIENRKIV---MILQGHEQ--DIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLS-IEDG 208 (393)
T ss_dssp S-EEEEEETTSCEEEEETTTTEEE---EEECCCSS--CEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSSC
T ss_pred C-EEEEEcCCCeEEEEECCCCcEE---EEEccCCC--CEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEE-cCCC
Confidence 5 7899999999999999865432 33333332 12245778899999999999999999999999888776 5677
Q ss_pred eEEEEEeC---CEEEEEeCCCcEEEEECCCCceeEEEec------CCCCceEEEEEEcCCCCEEEEEECCCcEEEEeCCc
Q 008820 385 VSTLAVCN---GVLYSGSRDGTIRLWSLSDHSLLTVLEE------DSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDK 455 (552)
Q Consensus 385 v~~l~~~~---~~l~s~~~dg~i~iwd~~~~~~~~~~~~------~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~~ 455 (552)
+.++++++ .++++|+.|++|++||+++++.+..+.. .+...+.+ ++|+|++++|++|+.|+.|++||+..
T Consensus 209 v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~-v~~~~~g~~l~s~s~d~~v~~wd~~~ 287 (393)
T 1erj_A 209 VTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYS-VVFTRDGQSVVSGSLDRSVKLWNLQN 287 (393)
T ss_dssp EEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEE-EEECTTSSEEEEEETTSEEEEEEC--
T ss_pred cEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEE-EEECCCCCEEEEEeCCCEEEEEECCC
Confidence 99999983 3999999999999999999988777631 23445555 69999999999999999999999653
Q ss_pred --------------ceeeeecccceEEEEEe--cCCEEEEEeCCCeEEEEecCCCeeeeeeccCCCcccCcceEEEEEeC
Q 008820 456 --------------FMKSMQTHKGSVFAVFL--EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQ 519 (552)
Q Consensus 456 --------------~~~~~~~h~~~v~~v~~--~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~~ 519 (552)
+...+.+|...|.++.+ ++.+|++|+.|+.|++||+.+++....+..+ ...|.+++|++
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h-----~~~v~~v~~~~ 362 (393)
T 1erj_A 288 ANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGH-----RNSVISVAVAN 362 (393)
T ss_dssp -------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECC-----SSCEEEEEECS
T ss_pred CCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEECCC-----CCCEEEEEecC
Confidence 34567789999999887 8899999999999999999988766555432 66799999875
Q ss_pred --------CeEEEEeCCCeEEEEEecC
Q 008820 520 --------GKLFVGCADRTVKIALCNR 538 (552)
Q Consensus 520 --------~~l~s~s~Dg~v~iw~~~~ 538 (552)
+.|++|+.||+|+||++..
T Consensus 363 ~~~~~p~~~~l~sgs~Dg~i~iW~~~~ 389 (393)
T 1erj_A 363 GSSLGPEYNVFATGSGDCKARIWKYKK 389 (393)
T ss_dssp SCTTCTTCEEEEEEETTSEEEEEEEEE
T ss_pred CcCcCCCCCEEEEECCCCcEEECcccc
Confidence 2499999999999999874
No 19
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=7.2e-35 Score=286.48 Aligned_cols=266 Identities=17% Similarity=0.279 Sum_probs=227.3
Q ss_pred CCccccceeeecCcceEEEeeCCCeEEEEE---------eecCccceEEEEEc--CCEEEEEeCCCcEEEEeCCCC----
Q 008820 218 DGADIDQARAAGGVKDLVNGLSKGNVKFKD---------LQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDF---- 282 (552)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------l~~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~---- 282 (552)
+...+..+.+++++..++++..++.+++|+ +..|...|.+++|+ +++|++|+.|+.|++||+.++
T Consensus 54 H~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~~ 133 (340)
T 1got_B 54 HLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNV 133 (340)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTCSBSC
T ss_pred CCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEECccCCCcc
Confidence 344588889999999999999999999997 46799999999999 999999999999999999865
Q ss_pred eEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCC
Q 008820 283 SHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDR 362 (552)
Q Consensus 283 ~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg 362 (552)
+....+.+|.+.|.++.|++++ .+++++.|++|++||+.++... ..+..+.. .....+++|+++++++|+.||
T Consensus 134 ~~~~~~~~h~~~v~~~~~~~~~--~l~s~s~d~~i~~wd~~~~~~~---~~~~~h~~--~v~~~~~~~~~~~l~sg~~d~ 206 (340)
T 1got_B 134 RVSRELAGHTGYLSCCRFLDDN--QIVTSSGDTTCALWDIETGQQT---TTFTGHTG--DVMSLSLAPDTRLFVSGACDA 206 (340)
T ss_dssp EEEEEEECCSSCEEEEEEEETT--EEEEEETTSCEEEEETTTTEEE---EEECCCSS--CEEEEEECTTSSEEEEEETTS
T ss_pred eeEEEecCCCccEEEEEECCCC--cEEEEECCCcEEEEECCCCcEE---EEEcCCCC--ceEEEEECCCCCEEEEEeCCC
Confidence 4667889999999999999865 4789999999999999876433 33333332 123457888899999999999
Q ss_pred cEEEEECCCCceeEEecCCCCCeEEEEEe--CCEEEEEeCCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEE
Q 008820 363 TIKAWSLLDGTLSCTMSGHKSAVSTLAVC--NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLV 440 (552)
Q Consensus 363 ~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~ 440 (552)
.|++||+++++++..+.+|...|++++|+ +++|++|+.|++|++||+++++.+..+...........++|+|++++++
T Consensus 207 ~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~ 286 (340)
T 1got_B 207 SAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLL 286 (340)
T ss_dssp CEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEE
T ss_pred cEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEE
Confidence 99999999999999999999999999999 4499999999999999999998887776433222233479999999999
Q ss_pred EEECCCcEEEEeCC--cceeeeecccceEEEEEe--cCCEEEEEeCCCeEEEEe
Q 008820 441 VSHESGSIKVWRND--KFMKSMQTHKGSVFAVFL--EGKWLFTGGWDKTVSVQE 490 (552)
Q Consensus 441 ~g~~dg~i~iwd~~--~~~~~~~~h~~~v~~v~~--~~~~l~sgs~dg~i~iwd 490 (552)
+|+.||.|++||.. +....+.+|...|.++.| ++.+|++|+.|+.|++||
T Consensus 287 ~g~~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 287 AGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp EEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred EECCCCeEEEEEcccCcEeeEeecCCCcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 99999999999964 467788999999999987 889999999999999997
No 20
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=2e-34 Score=294.32 Aligned_cols=285 Identities=22% Similarity=0.306 Sum_probs=243.5
Q ss_pred EEEeecCccc-eEEEEEcCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCC
Q 008820 245 FKDLQGHRDC-VTGLAVGGGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFS 323 (552)
Q Consensus 245 ~~~l~~H~~~-V~~l~~s~~~l~s~s~dg~I~iwd~~~~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~ 323 (552)
...+.+|.+. +.++.++++++++|+.||+|++||+.+++.+..+.+|.+.|.+++|+ +.++++|+.||+|++||+.
T Consensus 111 ~~~l~~h~~~v~~~~~~~g~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~---~~~l~s~~~dg~i~vwd~~ 187 (445)
T 2ovr_B 111 PKVLKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR---DNIIISGSTDRTLKVWNAE 187 (445)
T ss_dssp CEEEECSTTSCEEEEEEETTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEE---TTEEEEEETTSCEEEEETT
T ss_pred eEEecccCCCcEEEEEEcCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCEEEEEec---CCEEEEEeCCCeEEEEECC
Confidence 3558899986 57888889999999999999999999999999999999999999997 3489999999999999998
Q ss_pred CCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEeCCEEEEEeCCCc
Q 008820 324 FPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVCNGVLYSGSRDGT 403 (552)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~~~dg~ 403 (552)
++.... .+..+. ..+.++.++++.+++|+.||.|++||+++++.+..+.+|...|.++.+.++.+++|+.||.
T Consensus 188 ~~~~~~---~~~~h~----~~v~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~ 260 (445)
T 2ovr_B 188 TGECIH---TLYGHT----STVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFM 260 (445)
T ss_dssp TTEEEE---EECCCS----SCEEEEEEETTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEECSSCEEEEETTSC
T ss_pred cCcEEE---EECCCC----CcEEEEEecCCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEECCCEEEEEcCCCE
Confidence 764332 233322 2466777788999999999999999999999999999999999999998779999999999
Q ss_pred EEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEECCCcEEEEeCC--cceeeeecccceEEEEEecCCEEEEEe
Q 008820 404 IRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRND--KFMKSMQTHKGSVFAVFLEGKWLFTGG 481 (552)
Q Consensus 404 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~--~~~~~~~~h~~~v~~v~~~~~~l~sgs 481 (552)
|++||+++++.+..+..+. ..+.+ +.+ ++.++++|+.||.|++||.+ +.+..+.+|...+.++.++++++++|+
T Consensus 261 i~iwd~~~~~~~~~~~~~~-~~v~~-~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~ 336 (445)
T 2ovr_B 261 VKVWDPETETCLHTLQGHT-NRVYS-LQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGN 336 (445)
T ss_dssp EEEEEGGGTEEEEEECCCS-SCEEE-EEE--CSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEEETTEEEEEE
T ss_pred EEEEECCCCcEeEEecCCC-CceEE-EEE--CCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcccEEEEEEeCCEEEEEe
Confidence 9999999999998887653 44443 345 88999999999999999965 567788899999999999999999999
Q ss_pred CCCeEEEEecCCCeeeeeeccCCCcccCcceEEEEEeCCeEEEEeCCCeEEEEEecCCcceeEEE
Q 008820 482 WDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQGKLFVGCADRTVKIALCNRQIPEIFSL 546 (552)
Q Consensus 482 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~l~s~s~Dg~v~iw~~~~~~~~~~~~ 546 (552)
.||.|++||+.+++....+.... .+...|.+++|+++.+++|+.||.|++||+. ++..+..+
T Consensus 337 ~dg~i~vwd~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~l~s~~~dg~v~iwd~~-~~~~~~~~ 398 (445)
T 2ovr_B 337 ADSTVKIWDIKTGQCLQTLQGPN--KHQSAVTCLQFNKNFVITSSDDGTVKLWDLK-TGEFIRNL 398 (445)
T ss_dssp TTSCEEEEETTTCCEEEEECSTT--SCSSCEEEEEECSSEEEEEETTSEEEEEETT-TCCEEEEE
T ss_pred CCCeEEEEECCCCcEEEEEccCC--CCCCCEEEEEECCCEEEEEeCCCeEEEEECC-CCceeeee
Confidence 99999999999887766554321 2367799999999999999999999999998 45555555
No 21
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=3.2e-34 Score=282.24 Aligned_cols=282 Identities=19% Similarity=0.316 Sum_probs=218.2
Q ss_pred EEEEeecCccceEEEEE-----c---CCEEEEEeCCCcEEEEeCCC-------CeEEEEEeCCCCCeEEEEEecCCCCEE
Q 008820 244 KFKDLQGHRDCVTGLAV-----G---GGFLFSSSFDKSIHVWSLKD-------FSHVHTFKGHDHKVMAVVYVDEDQPLC 308 (552)
Q Consensus 244 ~~~~l~~H~~~V~~l~~-----s---~~~l~s~s~dg~I~iwd~~~-------~~~~~~~~~h~~~v~~v~~~~~~~~~l 308 (552)
....|.||.+.|++++| + +++|+||+.|++|++||+.+ +.+...+.+|...|.+++|+|++. ++
T Consensus 13 ~~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~-~l 91 (343)
T 2xzm_R 13 KRGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENC-FA 91 (343)
T ss_dssp EEEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTT-EE
T ss_pred eeeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCC-EE
Confidence 45679999999999999 3 78999999999999999874 356778899999999999999654 78
Q ss_pred EEEcCCCcEEEEeCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCceeEEec---CCCCCe
Q 008820 309 ISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMS---GHKSAV 385 (552)
Q Consensus 309 ~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~---~h~~~v 385 (552)
++|+.|++|++||++++... ..+..+.. .....+++|++++|++|+.|++|++||+.. ....... +|...|
T Consensus 92 ~s~s~D~~v~lwd~~~~~~~---~~~~~h~~--~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~-~~~~~~~~~~~~~~~v 165 (343)
T 2xzm_R 92 ISSSWDKTLRLWDLRTGTTY---KRFVGHQS--EVYSVAFSPDNRQILSAGAEREIKLWNILG-ECKFSSAEKENHSDWV 165 (343)
T ss_dssp EEEETTSEEEEEETTSSCEE---EEEECCCS--CEEEEEECSSTTEEEEEETTSCEEEEESSS-CEEEECCTTTSCSSCE
T ss_pred EEEcCCCcEEEEECCCCcEE---EEEcCCCC--cEEEEEECCCCCEEEEEcCCCEEEEEeccC-CceeeeecccCCCcee
Confidence 99999999999999876433 33333332 123457889999999999999999999974 3333333 788999
Q ss_pred EEEEEeC------------CEEEEEeCCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEECCCcEEEEeC
Q 008820 386 STLAVCN------------GVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRN 453 (552)
Q Consensus 386 ~~l~~~~------------~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~ 453 (552)
.+++|++ .++++++.|++|++|| .+.+....+..+ ...+.+ ++|+|++++|++|+.||.|++||+
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd-~~~~~~~~~~~h-~~~v~~-~~~s~~g~~l~sgs~dg~v~iwd~ 242 (343)
T 2xzm_R 166 SCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWN-TNFQIRYTFKAH-ESNVNH-LSISPNGKYIATGGKDKKLLIWDI 242 (343)
T ss_dssp EEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEE-TTTEEEEEEECC-SSCEEE-EEECTTSSEEEEEETTCEEEEEES
T ss_pred eeeeeccccccccccCCCCCEEEEEcCCCEEEEEc-CCCceeEEEcCc-cccceE-EEECCCCCEEEEEcCCCeEEEEEC
Confidence 9999982 4799999999999999 455666667665 345555 699999999999999999999997
Q ss_pred Cc---ceeeeecccceEEEEEe--cCCEEEEEeCCCeEEEEecCCCeeee--eeccC------CCcccCcceEEEEEeC-
Q 008820 454 DK---FMKSMQTHKGSVFAVFL--EGKWLFTGGWDKTVSVQELAGDEFEE--DVIPT------GAIPCGSVITALLYWQ- 519 (552)
Q Consensus 454 ~~---~~~~~~~h~~~v~~v~~--~~~~l~sgs~dg~i~iwd~~~~~~~~--~~~~~------~~~~~~~~v~~l~~~~- 519 (552)
.. ....+ .+...|.++.| ++.+++++ .|+.|++||+.+.+... .+... ....+...|.+++|+|
T Consensus 243 ~~~~~~~~~~-~~~~~v~~v~~sp~~~~la~~-~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~ 320 (343)
T 2xzm_R 243 LNLTYPQREF-DAGSTINQIAFNPKLQWVAVG-TDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNAL 320 (343)
T ss_dssp SCCSSCSEEE-ECSSCEEEEEECSSSCEEEEE-ESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSS
T ss_pred CCCcccceee-cCCCcEEEEEECCCCCEEEEE-CCCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEECCC
Confidence 42 22233 34556888887 77777655 58889999998765433 11110 0112356799999996
Q ss_pred -CeEEEEeCCCeEEEEEec
Q 008820 520 -GKLFVGCADRTVKIALCN 537 (552)
Q Consensus 520 -~~l~s~s~Dg~v~iw~~~ 537 (552)
..|++|+.||.|++|+++
T Consensus 321 g~~l~sg~~Dg~v~~w~~~ 339 (343)
T 2xzm_R 321 GKKLFAGFTDGVIRTFSFE 339 (343)
T ss_dssp SCCEEEEETTSEEEEEEEE
T ss_pred CCeEEEecCCceEEEEEEE
Confidence 359999999999999986
No 22
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=2.4e-34 Score=282.31 Aligned_cols=285 Identities=20% Similarity=0.331 Sum_probs=225.8
Q ss_pred EEEeecCccceEEEEEc---CCEEEEEeCCCcEEEEeCCCC-----eEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCc
Q 008820 245 FKDLQGHRDCVTGLAVG---GGFLFSSSFDKSIHVWSLKDF-----SHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGG 316 (552)
Q Consensus 245 ~~~l~~H~~~V~~l~~s---~~~l~s~s~dg~I~iwd~~~~-----~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~ 316 (552)
..+|+||.++|++++|+ +++|+|||.|++|+|||+.+. .+...+.+|...|.+++|+|++. ++++++.|+.
T Consensus 31 ~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~-~l~s~~~d~~ 109 (340)
T 4aow_A 31 RGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQ-FALSGSWDGT 109 (340)
T ss_dssp EEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSS-EEEEEETTSE
T ss_pred EEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCC-EEEEEccccc
Confidence 45799999999999998 579999999999999998754 35778899999999999999655 7899999999
Q ss_pred EEEEeCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCcee-EEecCCCCCeEEEEEe-C--
Q 008820 317 IFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLS-CTMSGHKSAVSTLAVC-N-- 392 (552)
Q Consensus 317 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~-~~~~~h~~~v~~l~~~-~-- 392 (552)
|++|+............ .. .......+.++++.+++|+.|+.+++||....... ....+|...+.+++|+ +
T Consensus 110 i~~~~~~~~~~~~~~~~---~~--~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 184 (340)
T 4aow_A 110 LRLWDLTTGTTTRRFVG---HT--KDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSS 184 (340)
T ss_dssp EEEEETTTTEEEEEEEC---CS--SCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSS
T ss_pred ceEEeecccceeeeecC---CC--CceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCC
Confidence 99999886533222221 11 22234567788889999999999999998766543 3457899999999998 2
Q ss_pred -CEEEEEeCCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEECCCcEEEEeCCc--ceeeeecccceEEE
Q 008820 393 -GVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDK--FMKSMQTHKGSVFA 469 (552)
Q Consensus 393 -~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~~--~~~~~~~h~~~v~~ 469 (552)
.++++++.|+.|++||+++++.+..+..+ .+.+.+ ++|+|++++|++|+.||.|++||.+. .+..+.. ...+.+
T Consensus 185 ~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h-~~~v~~-~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~-~~~v~~ 261 (340)
T 4aow_A 185 NPIIVSCGWDKLVKVWNLANCKLKTNHIGH-TGYLNT-VTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG-GDIINA 261 (340)
T ss_dssp SCEEEEEETTSCEEEEETTTTEEEEEECCC-SSCEEE-EEECTTSSEEEEEETTCEEEEEETTTTEEEEEEEC-SSCEEE
T ss_pred CcEEEEEcCCCEEEEEECCCCceeeEecCC-CCcEEE-EEECCCCCEEEEEeCCCeEEEEEeccCceeeeecC-CceEEe
Confidence 27899999999999999999998888776 455555 69999999999999999999999765 3444444 457888
Q ss_pred EEe-cCCEEEEEeCCCeEEEEecCCCeeeeeeccC----CCcccCcceEEEEEeCC--eEEEEeCCCeEEEEEecC
Q 008820 470 VFL-EGKWLFTGGWDKTVSVQELAGDEFEEDVIPT----GAIPCGSVITALLYWQG--KLFVGCADRTVKIALCNR 538 (552)
Q Consensus 470 v~~-~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~----~~~~~~~~v~~l~~~~~--~l~s~s~Dg~v~iw~~~~ 538 (552)
+.+ .+..+++++.|+.|++||+++.......... ....+...|++++|+++ .|++|+.||.|+|||+..
T Consensus 262 ~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~t 337 (340)
T 4aow_A 262 LCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTI 337 (340)
T ss_dssp EEECSSSSEEEEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEEEEEEEC
T ss_pred eecCCCCceeeccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCC
Confidence 777 4456667778999999999987665443321 11234677999999964 599999999999999973
No 23
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.2e-34 Score=275.02 Aligned_cols=281 Identities=21% Similarity=0.312 Sum_probs=240.0
Q ss_pred CeEEEEEeecCccceEEEEEc-CCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEE
Q 008820 241 GNVKFKDLQGHRDCVTGLAVG-GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFV 319 (552)
Q Consensus 241 ~~~~~~~l~~H~~~V~~l~~s-~~~l~s~s~dg~I~iwd~~~~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~v 319 (552)
+...+..+.+|.+.|++++|. +++|++|+.||.|++||+.+++....+..|...|.+++|+|++. ++++++.||.|++
T Consensus 7 ~~~~~~~l~~h~~~v~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~~ 85 (313)
T 3odt_A 7 GYQLSATLKGHDQDVRDVVAVDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKE-LLLFGGKDTMING 85 (313)
T ss_dssp CCEEEEEECCCSSCEEEEEEEETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTT-EEEEEETTSCEEE
T ss_pred cHHHHHHhhCCCCCcEEEEecCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCC-EEEEecCCCeEEE
Confidence 345678899999999999998 99999999999999999999999999999999999999999654 8899999999999
Q ss_pred EeCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe---CCEEE
Q 008820 320 WSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC---NGVLY 396 (552)
Q Consensus 320 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~---~~~l~ 396 (552)
|++...........+..+.. .+.++.++++.+++++.||.|++|| .++....+..|...+.++.+. ++.++
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~----~i~~~~~~~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~ 159 (313)
T 3odt_A 86 VPLFATSGEDPLYTLIGHQG----NVCSLSFQDGVVISGSWDKTAKVWK--EGSLVYNLQAHNASVWDAKVVSFSENKFL 159 (313)
T ss_dssp EETTCCTTSCC-CEECCCSS----CEEEEEEETTEEEEEETTSEEEEEE--TTEEEEEEECCSSCEEEEEEEETTTTEEE
T ss_pred EEeeecCCCCcccchhhccc----CEEEEEecCCEEEEEeCCCCEEEEc--CCcEEEecccCCCceeEEEEccCCCCEEE
Confidence 99987665555555544433 4566777899999999999999999 778888999999999999997 45999
Q ss_pred EEeCCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEECCCcEEEEeCC--cceeeeecccceEEEEEe--
Q 008820 397 SGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRND--KFMKSMQTHKGSVFAVFL-- 472 (552)
Q Consensus 397 s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~--~~~~~~~~h~~~v~~v~~-- 472 (552)
+++.|+.|++|| ..+....+...+...+.. ++++|++. +++++.||.|++||.+ +.+..+.+|...|.++.+
T Consensus 160 ~~~~d~~i~i~d--~~~~~~~~~~~~~~~i~~-~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~ 235 (313)
T 3odt_A 160 TASADKTIKLWQ--NDKVIKTFSGIHNDVVRH-LAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLP 235 (313)
T ss_dssp EEETTSCEEEEE--TTEEEEEECSSCSSCEEE-EEEEETTE-EEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECT
T ss_pred EEECCCCEEEEe--cCceEEEEeccCcccEEE-EEEcCCCe-EEEccCCCeEEEEECCchhhhhhhhcCCceEEEEEEec
Confidence 999999999999 556677777655566655 68999988 9999999999999965 567788899999999998
Q ss_pred cCCEEEEEeCCCeEEEEecCCCeeeeeeccCCCcccCcceEEEEEeC-CeEEEEeCCCeEEEEEecC
Q 008820 473 EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQ-GKLFVGCADRTVKIALCNR 538 (552)
Q Consensus 473 ~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~~-~~l~s~s~Dg~v~iw~~~~ 538 (552)
++ .|++++.||.|++||+.+++....+..+ ...|.+++|++ +.+++++.||.|++|+++.
T Consensus 236 ~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~-----~~~i~~~~~~~~~~~~~~~~dg~i~iw~~~~ 296 (313)
T 3odt_A 236 NG-DIVSCGEDRTVRIWSKENGSLKQVITLP-----AISIWSVDCMSNGDIIVGSSDNLVRIFSQEK 296 (313)
T ss_dssp TS-CEEEEETTSEEEEECTTTCCEEEEEECS-----SSCEEEEEECTTSCEEEEETTSCEEEEESCG
T ss_pred CC-CEEEEecCCEEEEEECCCCceeEEEecc-----CceEEEEEEccCCCEEEEeCCCcEEEEeCCC
Confidence 55 6999999999999999988776665443 55799999995 4699999999999999984
No 24
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=1.7e-33 Score=297.32 Aligned_cols=314 Identities=22% Similarity=0.365 Sum_probs=261.3
Q ss_pred CCccccceeeecCcceEEEeeCCCeEEEEE--------eecCccceEEEEEc--CCEEEEEeCCCcEEEEeCCCCeEEEE
Q 008820 218 DGADIDQARAAGGVKDLVNGLSKGNVKFKD--------LQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHT 287 (552)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------l~~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~~~~~~ 287 (552)
+...+..+.+++++..++++..++.+++|+ +.+|...|++++|+ ++.+++++.|++|++||. +++....
T Consensus 220 ~~~~v~~~~~s~dg~~l~~~~~d~~i~~w~~~~~~~~~~~~~~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~-~~~~~~~ 298 (577)
T 2ymu_A 220 HSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVNGVAFRPDGQTIASASDDKTVKLWNR-NGQLLQT 298 (577)
T ss_dssp CSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEET-TSCEEEE
T ss_pred CCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCEEEEEeCCCEEEEEeC-CCcEEEE
Confidence 344577788889999999999999998875 57899999999999 899999999999999996 5678889
Q ss_pred EeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEE
Q 008820 288 FKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAW 367 (552)
Q Consensus 288 ~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iw 367 (552)
+.+|...|.+++|+|++. .+++++.|++|++||..... +.....+.. .....+++|+++.+++|+.||.|++|
T Consensus 299 ~~~h~~~v~~~~~~~~~~-~l~t~~~d~~i~~w~~~~~~----~~~~~~~~~--~v~~~~~s~~g~~l~~~~~dg~v~~~ 371 (577)
T 2ymu_A 299 LTGHSSSVWGVAFSPDGQ-TIASASDDKTVKLWNRNGQH----LQTLTGHSS--SVWGVAFSPDGQTIASASDDKTVKLW 371 (577)
T ss_dssp ECCCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTSCE----EEEECCCSS--CEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred EecCCCCeEEEEECCCCC-EEEEEeCCCeEEEEeCCCCe----eEEEeCCCC--CEEEEEECCCCCEEEEEeCCCEEEEE
Confidence 999999999999999665 77999999999999976432 222323222 12235788999999999999999999
Q ss_pred ECCCCceeEEecCCCCCeEEEEEe-C-CEEEEEeCCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEECC
Q 008820 368 SLLDGTLSCTMSGHKSAVSTLAVC-N-GVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHES 445 (552)
Q Consensus 368 d~~~~~~~~~~~~h~~~v~~l~~~-~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~d 445 (552)
|. +++.+..+.+|...|++++|+ + .+|++++.|+.|++||. +++.+..+..+ ...+.. ++|+|++++|++++.|
T Consensus 372 ~~-~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~-~~~~~~~~~~~-~~~v~~-~~~s~d~~~l~~~~~d 447 (577)
T 2ymu_A 372 NR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGH-SSSVWG-VAFSPDDQTIASASDD 447 (577)
T ss_dssp ET-TCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TCCEEEEEECC-SSCEEE-EEECTTSSEEEEEETT
T ss_pred cC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeC-CCCEEEEecCC-CCCeEE-EEECCCCCEEEEEcCC
Confidence 95 678888999999999999999 3 39999999999999995 56777777766 344555 6999999999999999
Q ss_pred CcEEEEeCC-cceeeeecccceEEEEEe--cCCEEEEEeCCCeEEEEecCCCeeeeeeccCCCcccCcceEEEEEeCC--
Q 008820 446 GSIKVWRND-KFMKSMQTHKGSVFAVFL--EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQG-- 520 (552)
Q Consensus 446 g~i~iwd~~-~~~~~~~~h~~~v~~v~~--~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~-- 520 (552)
+.|++||.. +.+..+.+|...|.++.| ++++|++++.|+.|++||..+ +....+.. +...|++++|+|+
T Consensus 448 ~~v~~w~~~~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~~~-~~~~~~~~-----h~~~v~~l~~s~dg~ 521 (577)
T 2ymu_A 448 KTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNG-QLLQTLTG-----HSSSVRGVAFSPDGQ 521 (577)
T ss_dssp SEEEEEETTSCEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEETTS-CEEEEEEC-----CSSCEEEEEECTTSS
T ss_pred CEEEEEECCCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcCCC-CEEEEEeC-----CCCCEEEEEEcCCCC
Confidence 999999954 567788999999999887 899999999999999999754 44444333 2667999999963
Q ss_pred eEEEEeCCCeEEEEEecCCcceeEEEecccc
Q 008820 521 KLFVGCADRTVKIALCNRQIPEIFSLLLHIN 551 (552)
Q Consensus 521 ~l~s~s~Dg~v~iw~~~~~~~~~~~~~gh~~ 551 (552)
.|++++.||.|++||.+ +..+..+.+|.+
T Consensus 522 ~l~s~~~dg~v~lwd~~--~~~~~~~~~h~~ 550 (577)
T 2ymu_A 522 TIASASDDKTVKLWNRN--GQLLQTLTGHSS 550 (577)
T ss_dssp CEEEEETTSEEEEECTT--SCEEEEEECCSS
T ss_pred EEEEEECcCEEEEEeCC--CCEEEEEcCCCC
Confidence 49999999999999964 667888999964
No 25
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=8.3e-34 Score=299.65 Aligned_cols=300 Identities=23% Similarity=0.389 Sum_probs=250.6
Q ss_pred CCccccceeeecCcceEEEeeCCCeEEEEE--------eecCccceEEEEEc--CCEEEEEeCCCcEEEEeCCCCeEEEE
Q 008820 218 DGADIDQARAAGGVKDLVNGLSKGNVKFKD--------LQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHT 287 (552)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------l~~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~~~~~~ 287 (552)
....+..+.+.+++..++++..++.+.+|+ +.+|.+.|.+++|+ ++++++++.|++|++||.. +..+..
T Consensus 261 ~~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~-~~~~~~ 339 (577)
T 2ymu_A 261 HSSSVNGVAFRPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRN-GQHLQT 339 (577)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSCEEEEETTSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT-SCEEEE
T ss_pred CCCCEEEEEEcCCCCEEEEEeCCCEEEEEeCCCcEEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCC-CCeeEE
Confidence 345577888889999999999999998886 56899999999999 8999999999999999975 456678
Q ss_pred EeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEE
Q 008820 288 FKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAW 367 (552)
Q Consensus 288 ~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iw 367 (552)
+.+|...|.+++|+|++. ++++++.|+.|++||... ..+..+..+.. . ....++++++++|++++.|+.|++|
T Consensus 340 ~~~~~~~v~~~~~s~~g~-~l~~~~~dg~v~~~~~~~----~~~~~~~~~~~-~-v~~~~~s~dg~~l~~~~~d~~v~~~ 412 (577)
T 2ymu_A 340 LTGHSSSVWGVAFSPDGQ-TIASASDDKTVKLWNRNG----QLLQTLTGHSS-S-VRGVAFSPDGQTIASASDDKTVKLW 412 (577)
T ss_dssp ECCCSSCEEEEEECTTSS-EEEEEETTSEEEEEETTC----CEEEEEECCSS-C-EEEEEECTTSSCEEEEETTSEEEEE
T ss_pred EeCCCCCEEEEEECCCCC-EEEEEeCCCEEEEEcCCC----CEEEEecCCCC-C-eEEEEECCCCCEEEEEeCCCEEEEE
Confidence 899999999999999765 779999999999999642 22333333332 1 2235788999999999999999999
Q ss_pred ECCCCceeEEecCCCCCeEEEEEe--CCEEEEEeCCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEECC
Q 008820 368 SLLDGTLSCTMSGHKSAVSTLAVC--NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHES 445 (552)
Q Consensus 368 d~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~d 445 (552)
|. +++.+..+.+|...|++++|+ +.+|++++.|++|++||. +++.+..+..+ ...+.+ ++|+|++++|++++.|
T Consensus 413 ~~-~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~-~~~~~~~~~~~-~~~v~~-~~~spd~~~las~~~d 488 (577)
T 2ymu_A 413 NR-NGQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNR-NGQLLQTLTGH-SSSVRG-VAFSPDGQTIASASDD 488 (577)
T ss_dssp CT-TCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEET-TSCEEEEEECC-SSCEEE-EEECTTSCEEEEEETT
T ss_pred eC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEEC-CCCEEEEEcCC-CCCEEE-EEEcCCCCEEEEEeCC
Confidence 95 678888999999999999999 349999999999999996 56777777766 344555 6999999999999999
Q ss_pred CcEEEEeC-CcceeeeecccceEEEEEe--cCCEEEEEeCCCeEEEEecCCCeeeeeeccCCCcccCcceEEEEEeCC--
Q 008820 446 GSIKVWRN-DKFMKSMQTHKGSVFAVFL--EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQG-- 520 (552)
Q Consensus 446 g~i~iwd~-~~~~~~~~~h~~~v~~v~~--~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~-- 520 (552)
+.|++||. ++.+..+.+|...|+++.| ++++|++++.||.|++||..+ +....+.. |...|++++|+|+
T Consensus 489 ~~i~iw~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~~~-~~~~~~~~-----h~~~v~~~~fs~dg~ 562 (577)
T 2ymu_A 489 KTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNG-QLLQTLTG-----HSSSVWGVAFSPDGQ 562 (577)
T ss_dssp SEEEEEETTSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTTS-CEEEEEEC-----CSSCEEEEEECTTSS
T ss_pred CEEEEEcCCCCEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeCCC-CEEEEEcC-----CCCCEEEEEEcCCCC
Confidence 99999995 4578889999999999987 899999999999999999754 34444332 2677999999953
Q ss_pred eEEEEeCCCeEEEEE
Q 008820 521 KLFVGCADRTVKIAL 535 (552)
Q Consensus 521 ~l~s~s~Dg~v~iw~ 535 (552)
.|++++.|++|++||
T Consensus 563 ~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 563 TIASASSDKTVKLWN 577 (577)
T ss_dssp CEEEEETTSCEEEEC
T ss_pred EEEEEeCCCEEEEeC
Confidence 499999999999997
No 26
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=1.4e-33 Score=289.58 Aligned_cols=284 Identities=19% Similarity=0.303 Sum_probs=233.1
Q ss_pred EEEEeecCccce-EEEEEcCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeC
Q 008820 244 KFKDLQGHRDCV-TGLAVGGGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSF 322 (552)
Q Consensus 244 ~~~~l~~H~~~V-~~l~~s~~~l~s~s~dg~I~iwd~~~~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~ 322 (552)
....+.+|.+.| .++.++++++++|+.||+|++||+.+++.+..+.+|.+.|.+++|+|++ ++++|+.||+|++||+
T Consensus 113 ~~~~l~~h~~~v~~~~~~~~~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~--~l~s~s~dg~i~vwd~ 190 (464)
T 3v7d_B 113 QRTTLRGHMTSVITCLQFEDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG--ILVSGSTDRTVRVWDI 190 (464)
T ss_dssp EEEEEECCSSSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSTT--EEEEEETTSCEEEEET
T ss_pred ceEEEcCCCCCcEEEEEECCCEEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCCC--EEEEEeCCCCEEEEEC
Confidence 456789998884 7888889999999999999999999999999999999999999998865 8899999999999999
Q ss_pred CCCCCCccccccccCCCceeeeEEEEe--eCCCEEEEeeCCCcEEEEECCCCce-----------------------eEE
Q 008820 323 SFPLGHEPLKKWNEEKDWRYSGIHALT--TSGRYLYTGSGDRTIKAWSLLDGTL-----------------------SCT 377 (552)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~sgs~dg~i~iwd~~~~~~-----------------------~~~ 377 (552)
+++... ..+..+... . ...++. ++++++++|+.||.|++||+++++. +..
T Consensus 191 ~~~~~~---~~~~~h~~~-v-~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (464)
T 3v7d_B 191 KKGCCT---HVFEGHNST-V-RCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGV 265 (464)
T ss_dssp TTTEEE---EEECCCSSC-E-EEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEE
T ss_pred CCCcEE---EEECCCCCc-c-EEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEE
Confidence 876433 333333322 1 223444 4667999999999999999987652 556
Q ss_pred ecCCCCCeEEEEEeCCEEEEEeCCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEECCCcEEEEeCC--c
Q 008820 378 MSGHKSAVSTLAVCNGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRND--K 455 (552)
Q Consensus 378 ~~~h~~~v~~l~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~--~ 455 (552)
+.+|...|.++...++++++++.|+.|++||+++++.+..+..+. ..+.+ ++++|+++++++|+.||.|++||.. +
T Consensus 266 ~~~~~~~v~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~-~~v~~-~~~~~~~~~l~sg~~dg~i~vwd~~~~~ 343 (464)
T 3v7d_B 266 LRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHT-DRIYS-TIYDHERKRCISASMDTTIRIWDLENGE 343 (464)
T ss_dssp ECCCSSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCS-SCEEE-EEEETTTTEEEEEETTSCEEEEETTTTE
T ss_pred ccCccceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCC-CCEEE-EEEcCCCCEEEEEeCCCcEEEEECCCCc
Confidence 788999999998888899999999999999999999999887663 44554 6999999999999999999999964 5
Q ss_pred ceeeeecccceEEEEEecCCEEEEEeCCCeEEEEecCCCeeeeeeccCCCcccCcceEEEEEe--CCeEEEEeCCCeEEE
Q 008820 456 FMKSMQTHKGSVFAVFLEGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYW--QGKLFVGCADRTVKI 533 (552)
Q Consensus 456 ~~~~~~~h~~~v~~v~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~s~Dg~v~i 533 (552)
.+..+.+|...|.++.+++.+|++++.||.|++||+.+......... ...+..++++ +..+++|+ ||.|++
T Consensus 344 ~~~~~~~h~~~v~~~~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~------~~~~~~~~~~~~~~~l~~~~-dg~i~i 416 (464)
T 3v7d_B 344 LMYTLQGHTALVGLLRLSDKFLVSAAADGSIRGWDANDYSRKFSYHH------TNLSAITTFYVSDNILVSGS-ENQFNI 416 (464)
T ss_dssp EEEEECCCSSCEEEEEECSSEEEEEETTSEEEEEETTTCCEEEEEEC------TTCCCEEEEEECSSEEEEEE-TTEEEE
T ss_pred EEEEEeCCCCcEEEEEEcCCEEEEEeCCCcEEEEECCCCceeeeecC------CCCccEEEEEeCCCEEEEec-CCeEEE
Confidence 77888999999999999999999999999999999998765544432 3345555565 34577776 999999
Q ss_pred EEecCCcceeE
Q 008820 534 ALCNRQIPEIF 544 (552)
Q Consensus 534 w~~~~~~~~~~ 544 (552)
||+.. +..+.
T Consensus 417 wd~~~-g~~~~ 426 (464)
T 3v7d_B 417 YNLRS-GKLVH 426 (464)
T ss_dssp EETTT-CCEEE
T ss_pred EECCC-CcEEe
Confidence 99983 44443
No 27
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=1.6e-34 Score=294.06 Aligned_cols=275 Identities=19% Similarity=0.304 Sum_probs=230.4
Q ss_pred EeecCccceEEEEEcCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCC
Q 008820 247 DLQGHRDCVTGLAVGGGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPL 326 (552)
Q Consensus 247 ~l~~H~~~V~~l~~s~~~l~s~s~dg~I~iwd~~~~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~ 326 (552)
...+|...|.+++++++++++|+.||+|++||+.+++....+.+|.+.|.+++| ++.++++|+.||+|++||+.++.
T Consensus 128 ~~~~~~~~v~~~~~d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~---~~~~l~sg~~dg~i~vwd~~~~~ 204 (435)
T 1p22_A 128 CRSETSKGVYCLQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY---DERVIITGSSDSTVRVWDVNTGE 204 (435)
T ss_dssp CCCSSCCCEEEEECCSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC---CSSEEEEEETTSCEEEEESSSCC
T ss_pred cccCCCCcEEEEEECCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE---CCCEEEEEcCCCeEEEEECCCCc
Confidence 345788899999999999999999999999999999999999999999999998 45589999999999999998765
Q ss_pred CCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCcee---EEecCCCCCeEEEEEeCCEEEEEeCCCc
Q 008820 327 GHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLS---CTMSGHKSAVSTLAVCNGVLYSGSRDGT 403 (552)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~---~~~~~h~~~v~~l~~~~~~l~s~~~dg~ 403 (552)
.... +..+ ...+.++.++++.+++|+.||.|++||+++++.. ..+.+|...|.++++.++++++|+.||.
T Consensus 205 ~~~~---~~~h----~~~v~~l~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~dg~ 277 (435)
T 1p22_A 205 MLNT---LIHH----CEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRT 277 (435)
T ss_dssp EEEE---ECCC----CSCEEEEECCTTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEETTEEEEEETTSE
T ss_pred EEEE---EcCC----CCcEEEEEEcCCEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEeCCCEEEEEeCCCe
Confidence 4333 2222 2346677788889999999999999999987765 6778999999999998889999999999
Q ss_pred EEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEECCCcEEEEeCC--cceeeeecccceEEEEEecCCEEEEEe
Q 008820 404 IRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRND--KFMKSMQTHKGSVFAVFLEGKWLFTGG 481 (552)
Q Consensus 404 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~--~~~~~~~~h~~~v~~v~~~~~~l~sgs 481 (552)
|++||+++++.+..+..+. ..+.+ +.+ +++++++|+.||.|++||.+ +.+..+.+|...|.++.+++.+|++|+
T Consensus 278 i~vwd~~~~~~~~~~~~~~-~~v~~-~~~--~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~l~sg~ 353 (435)
T 1p22_A 278 IKVWNTSTCEFVRTLNGHK-RGIAC-LQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGA 353 (435)
T ss_dssp EEEEETTTCCEEEEEECCS-SCEEE-EEE--ETTEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEECCSSEEEEEE
T ss_pred EEEEECCcCcEEEEEcCCC-CcEEE-EEe--CCCEEEEEeCCCeEEEEECCCCCEEEEEeCCcCcEEEEEecCCEEEEEe
Confidence 9999999999999988664 34433 344 57899999999999999965 567888999999999999999999999
Q ss_pred CCCeEEEEecCCCe---------eeeeeccCCCcccCcceEEEEEeCCeEEEEeCCCeEEEEEecCCc
Q 008820 482 WDKTVSVQELAGDE---------FEEDVIPTGAIPCGSVITALLYWQGKLFVGCADRTVKIALCNRQI 540 (552)
Q Consensus 482 ~dg~i~iwd~~~~~---------~~~~~~~~~~~~~~~~v~~l~~~~~~l~s~s~Dg~v~iw~~~~~~ 540 (552)
.||.|++||+.++. ....... +...|.+++|++..|++|+.||.|++||+....
T Consensus 354 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~-----h~~~v~~l~~~~~~l~s~s~Dg~i~iwd~~~~~ 416 (435)
T 1p22_A 354 YDGKIKVWDLVAALDPRAPAGTLCLRTLVE-----HSGRVFRLQFDEFQIVSSSHDDTILIWDFLNDP 416 (435)
T ss_dssp TTSCEEEEEHHHHTSTTSCTTTTEEEEECC-----CSSCCCCEEECSSCEEECCSSSEEEEEC-----
T ss_pred CCCcEEEEECCCCCCccccccchheeeccC-----CCCCeEEEEeCCCEEEEEeCCCEEEEEECCCCC
Confidence 99999999997543 2222222 366799999977889999999999999997443
No 28
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=1.4e-34 Score=284.02 Aligned_cols=267 Identities=18% Similarity=0.171 Sum_probs=209.3
Q ss_pred cccceeeecCcceEEEeeCCCeEEEEE-----e---------------ecCccceEEEEEc-CCEEEEEeCCCcEEEEeC
Q 008820 221 DIDQARAAGGVKDLVNGLSKGNVKFKD-----L---------------QGHRDCVTGLAVG-GGFLFSSSFDKSIHVWSL 279 (552)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----l---------------~~H~~~V~~l~~s-~~~l~s~s~dg~I~iwd~ 279 (552)
.+..+.+++++..++++. +..+++|+ + ..|...|++++|+ .+.|++|+.||+|+|||+
T Consensus 32 ~v~~~~fs~dG~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~l~~~s~dg~v~lWd~ 110 (344)
T 4gqb_B 32 QLEAARYRSDGALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGERGILVASDSGAVELWEL 110 (344)
T ss_dssp EEEEEEECTTSCEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETTTEEEEEETTSEEEEEEE
T ss_pred CEEEEEECCCCCEEEEEe-CCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCCCeEEEEECCCEEEEEec
Confidence 367788888888888776 44444432 1 2355789999999 889999999999999999
Q ss_pred CCCeEEEE----EeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCccccccccCCCceeeeEEEEeeCCC-E
Q 008820 280 KDFSHVHT----FKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGR-Y 354 (552)
Q Consensus 280 ~~~~~~~~----~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 354 (552)
.+++.+.. +.+|.+.|++++|+|++. +|++|+.|++|++||++++.. +..+..|... ....++++++. +
T Consensus 111 ~~~~~~~~~~~~~~~H~~~V~~v~~spdg~-~l~sgs~d~~i~iwd~~~~~~---~~~~~~h~~~--V~~~~~~~~~~~~ 184 (344)
T 4gqb_B 111 DENETLIVSKFCKYEHDDIVSTVSVLSSGT-QAVSGSKDICIKVWDLAQQVV---LSSYRAHAAQ--VTCVAASPHKDSV 184 (344)
T ss_dssp CTTSSCEEEEEEEECCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTTEE---EEEECCCSSC--EEEEEECSSCTTE
T ss_pred cCCCceeEeeccccCCCCCEEEEEECCCCC-EEEEEeCCCeEEEEECCCCcE---EEEEcCcCCc--eEEEEecCCCCCc
Confidence 98875443 458999999999999665 789999999999999987643 3334444331 22346777765 8
Q ss_pred EEEeeCCCcEEEEECCCCceeEEec--CCCCCeEEEEEe--C-CEEEEEeCCCcEEEEECCCCceeEEEecCCCCceEEE
Q 008820 355 LYTGSGDRTIKAWSLLDGTLSCTMS--GHKSAVSTLAVC--N-GVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSV 429 (552)
Q Consensus 355 l~sgs~dg~i~iwd~~~~~~~~~~~--~h~~~v~~l~~~--~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 429 (552)
|++|+.|++|++||++++++...+. .|...+++++|+ + .++++|+.||+|++||+++++++..+..|. ..+.+
T Consensus 185 l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~-~~v~~- 262 (344)
T 4gqb_B 185 FLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHS-QCVTG- 262 (344)
T ss_dssp EEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCS-SCEEE-
T ss_pred eeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCC-CCEEE-
Confidence 8999999999999999999888774 456679999998 2 388999999999999999999999998764 45555
Q ss_pred EEEcCCC-CEEEEEECCCcEEEEeCCc-ceeeeecccceEEEEEe--cCC-EEEEEeCCCeEEEEecCCCee
Q 008820 430 LSLTAVQ-HTLVVSHESGSIKVWRNDK-FMKSMQTHKGSVFAVFL--EGK-WLFTGGWDKTVSVQELAGDEF 496 (552)
Q Consensus 430 ~~~s~~~-~~l~~g~~dg~i~iwd~~~-~~~~~~~h~~~v~~v~~--~~~-~l~sgs~dg~i~iwd~~~~~~ 496 (552)
++|+|++ ++|++|+.|++|++||... .+..+.+|...|.+++| ++. +|+++|.|++|++|++.+...
T Consensus 263 v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~~~~ 334 (344)
T 4gqb_B 263 LVFSPHSVPFLASLSEDCSLAVLDSSLSELFRSQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPTEPL 334 (344)
T ss_dssp EEECSSSSCCEEEEETTSCEEEECTTCCEEEEECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC---
T ss_pred EEEccCCCeEEEEEeCCCeEEEEECCCCcEEEEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCCCCC
Confidence 6999997 5799999999999999654 34567899999999997 554 678999999999999987543
No 29
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=5.3e-33 Score=285.37 Aligned_cols=295 Identities=21% Similarity=0.366 Sum_probs=240.8
Q ss_pred CcceEEEeeCCCeEEEEE---------eecCccceEEEEEc-CCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEE
Q 008820 230 GVKDLVNGLSKGNVKFKD---------LQGHRDCVTGLAVG-GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVV 299 (552)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~---------l~~H~~~V~~l~~s-~~~l~s~s~dg~I~iwd~~~~~~~~~~~~h~~~v~~v~ 299 (552)
.+..++++..++.+++|+ +.+|.+.|++++|+ +.++++|+.||+|++||+.+++.+..+.+|.+.|.+++
T Consensus 131 ~~~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~ 210 (464)
T 3v7d_B 131 EDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGGILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLD 210 (464)
T ss_dssp ETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSTTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEE
T ss_pred CCCEEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCCCEEEEEeCCCCEEEEECCCCcEEEEECCCCCccEEEE
Confidence 456888899999998887 56899999999999 66999999999999999999999999999999999999
Q ss_pred Eec-CCCCEEEEEcCCCcEEEEeCCCCCCCccc--------------------cccccCCCceeeeEEEEeeCCCEEEEe
Q 008820 300 YVD-EDQPLCISGDSGGGIFVWSFSFPLGHEPL--------------------KKWNEEKDWRYSGIHALTTSGRYLYTG 358 (552)
Q Consensus 300 ~~~-~~~~~l~s~~~dg~i~vwd~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~l~sg 358 (552)
|++ .+..++++|+.||+|++||+.+....... ..... +...+.+++++++++++|
T Consensus 211 ~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~v~~~~~~~~~l~~~ 286 (464)
T 3v7d_B 211 IVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRG----HMASVRTVSGHGNIVVSG 286 (464)
T ss_dssp EEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECC----CSSCEEEEEEETTEEEEE
T ss_pred EecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccC----ccceEEEEcCCCCEEEEE
Confidence 996 34568999999999999999876533211 11111 233566788999999999
Q ss_pred eCCCcEEEEECCCCceeEEecCCCCCeEEEEEe--CCEEEEEeCCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCC
Q 008820 359 SGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC--NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQ 436 (552)
Q Consensus 359 s~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~ 436 (552)
+.||.|++||+++++++..+.+|...|.+++|+ +..+++|+.||+|++||+++++.+..+..+. ..+.. +.++ +
T Consensus 287 ~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~-~~v~~-~~~~--~ 362 (464)
T 3v7d_B 287 SYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHT-ALVGL-LRLS--D 362 (464)
T ss_dssp ETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECCCS-SCEEE-EEEC--S
T ss_pred eCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEeCCC-CcEEE-EEEc--C
Confidence 999999999999999999999999999999999 3499999999999999999999999988763 44443 4665 6
Q ss_pred CEEEEEECCCcEEEEeCCcceeeeec-c--cceEEEEEecCCEEEEEeCCCeEEEEecCCCeeeeeeccCCCcccCcceE
Q 008820 437 HTLVVSHESGSIKVWRNDKFMKSMQT-H--KGSVFAVFLEGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVIT 513 (552)
Q Consensus 437 ~~l~~g~~dg~i~iwd~~~~~~~~~~-h--~~~v~~v~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~ 513 (552)
+++++++.||.|++||..+....+.. | ...+.++.++++++++|+ ||.|++||+.+++........ +...|.
T Consensus 363 ~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-dg~i~iwd~~~g~~~~~~~~~----~~~~v~ 437 (464)
T 3v7d_B 363 KFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSGS-ENQFNIYNLRSGKLVHANILK----DADQIW 437 (464)
T ss_dssp SEEEEEETTSEEEEEETTTCCEEEEEECTTCCCEEEEEECSSEEEEEE-TTEEEEEETTTCCEEESCTTT----TCSEEE
T ss_pred CEEEEEeCCCcEEEEECCCCceeeeecCCCCccEEEEEeCCCEEEEec-CCeEEEEECCCCcEEehhhcc----CCCcEE
Confidence 89999999999999998765544443 2 334556677999999999 899999999998776543222 267899
Q ss_pred EEEEeCCeEE-EEeCCCeEEEEEec
Q 008820 514 ALLYWQGKLF-VGCADRTVKIALCN 537 (552)
Q Consensus 514 ~l~~~~~~l~-s~s~Dg~v~iw~~~ 537 (552)
+++|+++.++ +++.||.+.+|-++
T Consensus 438 ~v~~~~~~l~~~~~~~g~~~i~~ld 462 (464)
T 3v7d_B 438 SVNFKGKTLVAAVEKDGQSFLEILD 462 (464)
T ss_dssp EEEEETTEEEEEEEETTEEEEEEEE
T ss_pred EEEecCCEEEEEEEeCCeEEEEEee
Confidence 9999987755 55677777766554
No 30
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=5.6e-34 Score=280.68 Aligned_cols=273 Identities=21% Similarity=0.222 Sum_probs=221.8
Q ss_pred cccceeeecCcceEEEeeCCCeEEEEEe------------ecCccceEEEEEc--CCEEEEEeCCCcEEEEeCCCC--eE
Q 008820 221 DIDQARAAGGVKDLVNGLSKGNVKFKDL------------QGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDF--SH 284 (552)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l------------~~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~--~~ 284 (552)
.+..+.+++++..++++..++.+++|++ .+|.+.|++++|+ +++|++|+.|++|++||+.++ ++
T Consensus 18 ~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~ 97 (345)
T 3fm0_A 18 RCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFEC 97 (345)
T ss_dssp CEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEE
T ss_pred cEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEE
Confidence 5778889999999999999999999974 4799999999999 899999999999999998876 46
Q ss_pred EEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcE
Q 008820 285 VHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTI 364 (552)
Q Consensus 285 ~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i 364 (552)
+..+.+|...|.+++|+|++. +|++|+.|++|++||++.......+..+..+... ....+++|++++|++|+.|+.|
T Consensus 98 ~~~~~~h~~~v~~v~~sp~~~-~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~--v~~~~~~p~~~~l~s~s~d~~i 174 (345)
T 3fm0_A 98 VTTLEGHENEVKSVAWAPSGN-LLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQD--VKHVVWHPSQELLASASYDDTV 174 (345)
T ss_dssp EEEECCCSSCEEEEEECTTSS-EEEEEETTSCEEEEEECTTSCEEEEEEECCCCSC--EEEEEECSSSSCEEEEETTSCE
T ss_pred EEEccCCCCCceEEEEeCCCC-EEEEEECCCeEEEEECCCCCCeEEEEEecCcCCC--eEEEEECCCCCEEEEEeCCCcE
Confidence 788999999999999999654 8899999999999999876544444444444331 2345788999999999999999
Q ss_pred EEEECCCCc--eeEEecCCCCCeEEEEEe--CCEEEEEeCCCcEEEEECCCC---------------ceeEEEecCCCCc
Q 008820 365 KAWSLLDGT--LSCTMSGHKSAVSTLAVC--NGVLYSGSRDGTIRLWSLSDH---------------SLLTVLEEDSSGA 425 (552)
Q Consensus 365 ~iwd~~~~~--~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~---------------~~~~~~~~~~~~~ 425 (552)
++||.++++ +...+.+|...|++++|+ +.+|++++.|++|++||.... +++..+...+...
T Consensus 175 ~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 254 (345)
T 3fm0_A 175 KLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRT 254 (345)
T ss_dssp EEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSC
T ss_pred EEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceeeccCCccceeEEecCCCCCc
Confidence 999998875 456889999999999999 349999999999999997432 2344454444555
Q ss_pred eEEEEEEcCCCCEEEEEECCCcEEEEeCCcc-----------eeeeecccceEEEEEe--cC-CEEEEEeCCCeEEEEec
Q 008820 426 VSSVLSLTAVQHTLVVSHESGSIKVWRNDKF-----------MKSMQTHKGSVFAVFL--EG-KWLFTGGWDKTVSVQEL 491 (552)
Q Consensus 426 ~~~~~~~s~~~~~l~~g~~dg~i~iwd~~~~-----------~~~~~~h~~~v~~v~~--~~-~~l~sgs~dg~i~iwd~ 491 (552)
+.. ++|++++..+++++.|+.|++|+.... .....+|...|.+++| ++ .+|++|+.||+|++|++
T Consensus 255 v~~-v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~ 333 (345)
T 3fm0_A 255 IYD-IAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCSDDGEVAFWKY 333 (345)
T ss_dssp EEE-EEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSSTTEEEEEETTSCEEEEEE
T ss_pred EEE-EEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCCCceEEEEcCCCCcEEEEEe
Confidence 555 699999999999999999999985321 1223579999999998 44 59999999999999999
Q ss_pred CCCeee
Q 008820 492 AGDEFE 497 (552)
Q Consensus 492 ~~~~~~ 497 (552)
.+++..
T Consensus 334 ~~~~~~ 339 (345)
T 3fm0_A 334 QRPEGL 339 (345)
T ss_dssp CC----
T ss_pred cCCCCc
Confidence 876543
No 31
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=1.2e-33 Score=279.25 Aligned_cols=267 Identities=18% Similarity=0.249 Sum_probs=224.8
Q ss_pred CCccccceeeecCcceEEEeeCCCeEEEEE---------eecCccceEEEEEc--CCEEEEEeCCCcEEEEeCCCC----
Q 008820 218 DGADIDQARAAGGVKDLVNGLSKGNVKFKD---------LQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDF---- 282 (552)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------l~~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~---- 282 (552)
+...+.++.+++++..++++..++.+++|+ +..|...|.+++|+ +.++++|+.|+.+++|++...
T Consensus 63 H~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~~~ 142 (354)
T 2pbi_B 63 HGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNEN 142 (354)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEECCCCTTCC
T ss_pred CCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEecccccc
Confidence 344588899999999999999999999997 45688899999999 999999999999999998643
Q ss_pred --eEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCccccccccCCCceeeeEEEEee--CCCEEEEe
Q 008820 283 --SHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTT--SGRYLYTG 358 (552)
Q Consensus 283 --~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~sg 358 (552)
.....+.+|...|.+++|+|++. .+++++.|++|++||+++++.. ..+..+... ....++++ +++.|++|
T Consensus 143 ~~~~~~~~~~h~~~v~~~~~~~~~~-~l~t~s~D~~v~lwd~~~~~~~---~~~~~h~~~--v~~~~~~~~~~g~~l~sg 216 (354)
T 2pbi_B 143 MAAKKKSVAMHTNYLSACSFTNSDM-QILTASGDGTCALWDVESGQLL---QSFHGHGAD--VLCLDLAPSETGNTFVSG 216 (354)
T ss_dssp SGGGCEEEEECSSCEEEEEECSSSS-EEEEEETTSEEEEEETTTCCEE---EEEECCSSC--EEEEEECCCSSCCEEEEE
T ss_pred ccccceeeeccCCcEEEEEEeCCCC-EEEEEeCCCcEEEEeCCCCeEE---EEEcCCCCC--eEEEEEEeCCCCCEEEEE
Confidence 34567788999999999998655 7789999999999999876533 333333321 12335555 46799999
Q ss_pred eCCCcEEEEECCCCceeEEecCCCCCeEEEEEe--CCEEEEEeCCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCC
Q 008820 359 SGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC--NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQ 436 (552)
Q Consensus 359 s~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~ 436 (552)
+.||.|++||+++++++..+.+|...|++++|+ ++.|++|+.|++|++||+++++.+..+..+........++|+|++
T Consensus 217 s~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g 296 (354)
T 2pbi_B 217 GCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSG 296 (354)
T ss_dssp ETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTS
T ss_pred eCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCC
Confidence 999999999999999999999999999999999 449999999999999999998887777654332233447999999
Q ss_pred CEEEEEECCCcEEEEeCC--cceeeeecccceEEEEEe--cCCEEEEEeCCCeEEEEe
Q 008820 437 HTLVVSHESGSIKVWRND--KFMKSMQTHKGSVFAVFL--EGKWLFTGGWDKTVSVQE 490 (552)
Q Consensus 437 ~~l~~g~~dg~i~iwd~~--~~~~~~~~h~~~v~~v~~--~~~~l~sgs~dg~i~iwd 490 (552)
+++++|+.|+.|++||.. +.+..+.+|...|.++.| ++++|++|+.||+|++|+
T Consensus 297 ~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 297 RLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp SEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred CEEEEEECCCcEEEEECCCCceEEEEECCCCcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence 999999999999999964 467788899999999987 899999999999999996
No 32
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=3.6e-35 Score=293.21 Aligned_cols=277 Identities=17% Similarity=0.311 Sum_probs=226.0
Q ss_pred CCccccceeeecCcceEEEeeCCCeEEEEE---------eecCccceEEEEEc--CCEEEEEeCCCcEEEEeCCCCe---
Q 008820 218 DGADIDQARAAGGVKDLVNGLSKGNVKFKD---------LQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFS--- 283 (552)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------l~~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~~--- 283 (552)
+...+..+.+++.+..++++..++.+++|+ +.+|...|.+++|+ +++|++|+.|+.|++||+.+..
T Consensus 65 H~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~~~~~~~ 144 (380)
T 3iz6_a 65 HSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIFNLSSQADRD 144 (380)
T ss_dssp CSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEEECCCCSSCC
T ss_pred cccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEECCCCcccc
Confidence 445688999999999999999999999997 56899999999999 9999999999999999986532
Q ss_pred ----EEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCcccccc-ccCCCceeeeEEEEe-eCCCEEEE
Q 008820 284 ----HVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKW-NEEKDWRYSGIHALT-TSGRYLYT 357 (552)
Q Consensus 284 ----~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~l~s 357 (552)
....+.+|.+.|.++.|+|+++..+++|+.|++|++||+.++.....+... ...+...... .++. +++++|++
T Consensus 145 ~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~-~~~~~~~~~~l~s 223 (380)
T 3iz6_a 145 GNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLS-LSINSLNANMFIS 223 (380)
T ss_dssp CSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEE-EEECSSSCCEEEE
T ss_pred CCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEE-EEeecCCCCEEEE
Confidence 345678999999999999988888999999999999999876543322111 1111111222 2333 37789999
Q ss_pred eeCCCcEEEEECC-CCceeEEecCCCCCeEEEEEe--CCEEEEEeCCCcEEEEECCCCceeEEEecCCCC-----ceEEE
Q 008820 358 GSGDRTIKAWSLL-DGTLSCTMSGHKSAVSTLAVC--NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSG-----AVSSV 429 (552)
Q Consensus 358 gs~dg~i~iwd~~-~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~-----~~~~~ 429 (552)
|+.||+|++||++ .++.+..+.+|...|++++|+ +.+|++|+.|++|++||+++++.+..+..+... .....
T Consensus 224 gs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~ 303 (380)
T 3iz6_a 224 GSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTS 303 (380)
T ss_dssp EETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSE
T ss_pred EECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEE
Confidence 9999999999998 567888999999999999999 349999999999999999999988887654221 11233
Q ss_pred EEEcCCCCEEEEEECCCcEEEEeCC--cceeee----ecccceEEEEEe--cCCEEEEEeCCCeEEEEecCCCe
Q 008820 430 LSLTAVQHTLVVSHESGSIKVWRND--KFMKSM----QTHKGSVFAVFL--EGKWLFTGGWDKTVSVQELAGDE 495 (552)
Q Consensus 430 ~~~s~~~~~l~~g~~dg~i~iwd~~--~~~~~~----~~h~~~v~~v~~--~~~~l~sgs~dg~i~iwd~~~~~ 495 (552)
++|+|+++++++|+.||.|++||.. +....+ .+|.+.|.++.| ++.+|++|+.||+|++|++.+.+
T Consensus 304 ~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~~~ 377 (380)
T 3iz6_a 304 VAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWAFSGHR 377 (380)
T ss_dssp EEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEEEEECCSSS
T ss_pred EEECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEEEEecCCCc
Confidence 7999999999999999999999964 334444 679999999887 89999999999999999998653
No 33
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=6.7e-34 Score=285.68 Aligned_cols=293 Identities=16% Similarity=0.201 Sum_probs=236.6
Q ss_pred EEEeecCccceEEEEEcCCEEEEEeCCCcEEEEeCCCCe------EEEEEeCCCCCeEEEEEecC---CC---CEEEEEc
Q 008820 245 FKDLQGHRDCVTGLAVGGGFLFSSSFDKSIHVWSLKDFS------HVHTFKGHDHKVMAVVYVDE---DQ---PLCISGD 312 (552)
Q Consensus 245 ~~~l~~H~~~V~~l~~s~~~l~s~s~dg~I~iwd~~~~~------~~~~~~~h~~~v~~v~~~~~---~~---~~l~s~~ 312 (552)
...+.+|.++|++++|+.++|++|+.||+|++||+.+++ .+..+.+|...|.+++|+|+ ++ .+|++++
T Consensus 9 ~~~~~~h~~~i~~~~~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~ 88 (397)
T 1sq9_A 9 ANAGKAHDADIFSVSACNSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTS 88 (397)
T ss_dssp EEESSCSSSCEEEEEECSSEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEE
T ss_pred hhhhhhhhcCeEEEEecCCeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEEEEc
Confidence 456889999999999999999999999999999999887 78889999999999999997 24 5889999
Q ss_pred CCCcEEEEeCCCCCCCcc--ccccccCCC---ceeeeEEEEe----eCCCE-EEEeeCCCcEEEEECCC------CceeE
Q 008820 313 SGGGIFVWSFSFPLGHEP--LKKWNEEKD---WRYSGIHALT----TSGRY-LYTGSGDRTIKAWSLLD------GTLSC 376 (552)
Q Consensus 313 ~dg~i~vwd~~~~~~~~~--~~~~~~~~~---~~~~~~~~~~----~~~~~-l~sgs~dg~i~iwd~~~------~~~~~ 376 (552)
.||.|++||+.+...... ...+..+.. .......+++ ++++. |++|+.||.|++||+++ ++.+.
T Consensus 89 ~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~ 168 (397)
T 1sq9_A 89 FSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLN 168 (397)
T ss_dssp TTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTC
T ss_pred CCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccceee
Confidence 999999999987654111 222222210 1222345777 88899 99999999999999998 66666
Q ss_pred -----Ee-------cCCCCCeEEEEEe-CCEEEEEeCCCcEEEEECCCCceeEEEec---CC--CCceEEEEEEcCCCCE
Q 008820 377 -----TM-------SGHKSAVSTLAVC-NGVLYSGSRDGTIRLWSLSDHSLLTVLEE---DS--SGAVSSVLSLTAVQHT 438 (552)
Q Consensus 377 -----~~-------~~h~~~v~~l~~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~---~~--~~~~~~~~~~s~~~~~ 438 (552)
.+ ..|...|.+++|+ ++.+++++.|+.|++||+++++.+..+.. +. ...+.+ ++|+|++++
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~-i~~~~~~~~ 247 (397)
T 1sq9_A 169 WSPTLELQGTVESPMTPSQFATSVDISERGLIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRS-VKFSPQGSL 247 (397)
T ss_dssp CCCEEEEEEEECCSSSSCCCCCEEEECTTSEEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEE-EEECSSTTE
T ss_pred ccCcceeeeeeccccCCCCCceEEEECCCceEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccce-EEECCCCCE
Confidence 66 4589999999999 33999999999999999999999988886 30 344444 799999999
Q ss_pred EEEEECC---CcEEEEeCC--cceeeeec-------------ccceEEEEEe--cCCEEEEEeCCCeEEEEecCCCeeee
Q 008820 439 LVVSHES---GSIKVWRND--KFMKSMQT-------------HKGSVFAVFL--EGKWLFTGGWDKTVSVQELAGDEFEE 498 (552)
Q Consensus 439 l~~g~~d---g~i~iwd~~--~~~~~~~~-------------h~~~v~~v~~--~~~~l~sgs~dg~i~iwd~~~~~~~~ 498 (552)
|++++.| |.|++||+. +.+..+.. |...|.++.| ++++|++++.||.|++||+.+++...
T Consensus 248 l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~ 327 (397)
T 1sq9_A 248 LAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERIT 327 (397)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEE
T ss_pred EEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeE
Confidence 9999999 999999965 46677777 9999999987 79999999999999999999887766
Q ss_pred eeccCC-Cccc---------------CcceEEEEEeCC------------eEEEEeCCCeEEEEEecC
Q 008820 499 DVIPTG-AIPC---------------GSVITALLYWQG------------KLFVGCADRTVKIALCNR 538 (552)
Q Consensus 499 ~~~~~~-~~~~---------------~~~v~~l~~~~~------------~l~s~s~Dg~v~iw~~~~ 538 (552)
.+.... ...+ ...|.+++|+++ .|++++.||.|++|+++.
T Consensus 328 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~ 395 (397)
T 1sq9_A 328 TLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAG 395 (397)
T ss_dssp EEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC
T ss_pred EEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEEcCC
Confidence 655110 0012 677999999964 699999999999999973
No 34
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=1.3e-33 Score=274.90 Aligned_cols=268 Identities=22% Similarity=0.385 Sum_probs=219.0
Q ss_pred CCCCccccceeeecCc-ceEEEeeCCCeEEEEE--------------eecCccceEEEEEc--CCEEEEEeCCCcEEEEe
Q 008820 216 NSDGADIDQARAAGGV-KDLVNGLSKGNVKFKD--------------LQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWS 278 (552)
Q Consensus 216 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~--------------l~~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd 278 (552)
..+...+..+.+.+.+ +.++++..++.+++|+ +.+|...|++++|+ +++|++|+.|++|++||
T Consensus 14 ~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd 93 (319)
T 3frx_A 14 EGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWD 93 (319)
T ss_dssp CCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred ccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEE
Confidence 3444557778887754 7899999999999985 46899999999999 89999999999999999
Q ss_pred CCCCeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCccccccccCCCceeeeEEEEee------CC
Q 008820 279 LKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTT------SG 352 (552)
Q Consensus 279 ~~~~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~ 352 (552)
+.+++.+..+.+|...|.+++|+|++. ++++|+.|++|++||++.. .+..+..+... . ....+.| ++
T Consensus 94 ~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~s~D~~i~vwd~~~~----~~~~~~~h~~~-v-~~~~~~~~~~~~~~~ 166 (319)
T 3frx_A 94 VATGETYQRFVGHKSDVMSVDIDKKAS-MIISGSRDKTIKVWTIKGQ----CLATLLGHNDW-V-SQVRVVPNEKADDDS 166 (319)
T ss_dssp TTTTEEEEEEECCSSCEEEEEECTTSC-EEEEEETTSCEEEEETTSC----EEEEECCCSSC-E-EEEEECCC------C
T ss_pred CCCCCeeEEEccCCCcEEEEEEcCCCC-EEEEEeCCCeEEEEECCCC----eEEEEeccCCc-E-EEEEEccCCCCCCCc
Confidence 999999999999999999999999654 7899999999999998632 23333333321 1 1234444 34
Q ss_pred CEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe--CCEEEEEeCCCcEEEEECCCCceeEEEecCCCCceEEEE
Q 008820 353 RYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC--NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVL 430 (552)
Q Consensus 353 ~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 430 (552)
..+++++.|+.|++||+++++....+.+|...|++++|+ +.+|++++.||+|++||+++++.+..+..+ ..+.. +
T Consensus 167 ~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~--~~v~~-~ 243 (319)
T 3frx_A 167 VTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQ--DEVFS-L 243 (319)
T ss_dssp CEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECC--SCEEE-E
T ss_pred cEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCC--CcEEE-E
Confidence 489999999999999999999999999999999999999 349999999999999999999998888764 34554 7
Q ss_pred EEcCCCCEEEEEECCCcEEEEeCCc--ceeee--------ecccceEEEEEe--cCCEEEEEeCCCeEEEEecCCC
Q 008820 431 SLTAVQHTLVVSHESGSIKVWRNDK--FMKSM--------QTHKGSVFAVFL--EGKWLFTGGWDKTVSVQELAGD 494 (552)
Q Consensus 431 ~~s~~~~~l~~g~~dg~i~iwd~~~--~~~~~--------~~h~~~v~~v~~--~~~~l~sgs~dg~i~iwd~~~~ 494 (552)
+|+|++.++++++.+ .+++|+... ....+ ..|...+.+++| +|++|++|+.||.|++||+.+.
T Consensus 244 ~~sp~~~~la~~~~~-~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg~i~vWd~~t~ 318 (319)
T 3frx_A 244 AFSPNRYWLAAATAT-GIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQVMTA 318 (319)
T ss_dssp EECSSSSEEEEEETT-EEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEETTSCEEEEEEEEC
T ss_pred EEcCCCCEEEEEcCC-CcEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCCEEEEeecCceEEEEEEeec
Confidence 999999999988765 599998653 22222 235667888776 9999999999999999998653
No 35
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=3.7e-33 Score=273.28 Aligned_cols=302 Identities=15% Similarity=0.242 Sum_probs=240.4
Q ss_pred ccceeeecCcceEEEeeCC---------CeEEEEEeecCccceEEEEEc--CCEEEEEeCCCcEEEEeCCCCe---EEEE
Q 008820 222 IDQARAAGGVKDLVNGLSK---------GNVKFKDLQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFS---HVHT 287 (552)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~---------~~~~~~~l~~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~~---~~~~ 287 (552)
+..+.++++++.++..... .........+|.+.|++++|+ ++++++++ ||.|++||+.+++ ....
T Consensus 12 v~~~~~s~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~ 90 (337)
T 1gxr_A 12 AYSFHVTADGQMQPVPFPPDALIGPGIPRHARQINTLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQ 90 (337)
T ss_dssp CCEEEECSSSCEEECCCCTTSSSSTTCCSEEEEEEEECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEE
T ss_pred eeEEEECCCCCEEEeecCCCcEeccccCCccccceeccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCceeeeec
Confidence 4455556666665544322 223344456899999999999 88999998 9999999998764 3344
Q ss_pred Ee--CCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEE
Q 008820 288 FK--GHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIK 365 (552)
Q Consensus 288 ~~--~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~ 365 (552)
+. +|...|.+++|+|++. ++++++.||.|++||+.++... .......+.. .....+++++++++++++.||.|+
T Consensus 91 ~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~~~d~~~~~~~-~~~~~~~~~~--~i~~~~~~~~~~~l~~~~~dg~v~ 166 (337)
T 1gxr_A 91 LDCLNRDNYIRSCKLLPDGC-TLIVGGEASTLSIWDLAAPTPR-IKAELTSSAP--ACYALAISPDSKVCFSCCSDGNIA 166 (337)
T ss_dssp EECSCTTSBEEEEEECTTSS-EEEEEESSSEEEEEECCCC--E-EEEEEECSSS--CEEEEEECTTSSEEEEEETTSCEE
T ss_pred ccccCCCCcEEEEEEcCCCC-EEEEEcCCCcEEEEECCCCCcc-eeeecccCCC--ceEEEEECCCCCEEEEEeCCCcEE
Confidence 44 7999999999999654 7899999999999999876421 1222222221 123457788899999999999999
Q ss_pred EEECCCCceeEEecCCCCCeEEEEEe--CCEEEEEeCCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEE
Q 008820 366 AWSLLDGTLSCTMSGHKSAVSTLAVC--NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSH 443 (552)
Q Consensus 366 iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~ 443 (552)
+||+++++.+..+..|...|.+++|+ ++.+++++.|+.|++||+++++.+..+... ..+.. ++++|+++++++++
T Consensus 167 ~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~--~~v~~-~~~s~~~~~l~~~~ 243 (337)
T 1gxr_A 167 VWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFT--SQIFS-LGYCPTGEWLAVGM 243 (337)
T ss_dssp EEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECS--SCEEE-EEECTTSSEEEEEE
T ss_pred EEeCCCCceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeecCC--CceEE-EEECCCCCEEEEEc
Confidence 99999999999999999999999999 349999999999999999999988877643 34444 79999999999999
Q ss_pred CCCcEEEEeCCc-ceeeeecccceEEEEEe--cCCEEEEEeCCCeEEEEecCCCeeeeeeccCCCcccCcceEEEEEeC-
Q 008820 444 ESGSIKVWRNDK-FMKSMQTHKGSVFAVFL--EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQ- 519 (552)
Q Consensus 444 ~dg~i~iwd~~~-~~~~~~~h~~~v~~v~~--~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~~- 519 (552)
.|+.|++||... ....+..|...|.++.+ ++++|++++.||.|++||+.+++...... +...+.+++|++
T Consensus 244 ~~~~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~------~~~~v~~~~~s~~ 317 (337)
T 1gxr_A 244 ESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSK------ESSSVLSCDISVD 317 (337)
T ss_dssp TTSCEEEEETTSSCEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE------CSSCEEEEEECTT
T ss_pred CCCcEEEEECCCCCeEEEcCCccceeEEEECCCCCEEEEecCCCcEEEEECCCCeEEEEec------CCCcEEEEEECCC
Confidence 999999999764 44567789999999987 79999999999999999999887664433 256799999995
Q ss_pred -CeEEEEeCCCeEEEEEec
Q 008820 520 -GKLFVGCADRTVKIALCN 537 (552)
Q Consensus 520 -~~l~s~s~Dg~v~iw~~~ 537 (552)
..|++++.||.|++|++-
T Consensus 318 ~~~l~~~~~dg~i~iw~~~ 336 (337)
T 1gxr_A 318 DKYIVTGSGDKKATVYEVI 336 (337)
T ss_dssp SCEEEEEETTSCEEEEEEE
T ss_pred CCEEEEecCCCeEEEEEEe
Confidence 359999999999999973
No 36
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=2.7e-33 Score=283.51 Aligned_cols=309 Identities=14% Similarity=0.152 Sum_probs=246.4
Q ss_pred ccceeeecCcceEEEeeCCCeEEEEEee---------cCccceEEEEEc--CCEEEEEeCCCcEEEEeCCCCeEEEEEeC
Q 008820 222 IDQARAAGGVKDLVNGLSKGNVKFKDLQ---------GHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKG 290 (552)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~---------~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~~~~~~~~~ 290 (552)
...+.+++.++.++++..++.+.+|++. +| ..+....|+ +++|++|+.||.|++||+.+++....+.+
T Consensus 59 ~~~~~~s~~g~~l~~~~~d~~v~i~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~ 137 (420)
T 3vl1_A 59 GKGNTFEKVGSHLYKARLDGHDFLFNTIIRDGSKMLKRA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQA 137 (420)
T ss_dssp CTTCEEEEEETTEEEEEETTEEEEEECCSEETTTTSCSC-CEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEETTS
T ss_pred ccceeeeecCCeEEEEEcCCcEEEEEecccceeeEEecC-CceEEEEEecCCCEEEEEECCCCEEEEeCCCcceeeeccc
Confidence 3467888999999999999999999864 33 334444556 89999999999999999999999888889
Q ss_pred CCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECC
Q 008820 291 HDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLL 370 (552)
Q Consensus 291 h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~ 370 (552)
|...|.+++|+|++. +|++++.|+.|++||+.+++....+ ..+.. .....++++++++|++|+.||.|++||++
T Consensus 138 h~~~v~~~~~~~~~~-~l~s~s~d~~i~iwd~~~~~~~~~~---~~h~~--~v~~~~~~~~~~~l~s~~~d~~v~iwd~~ 211 (420)
T 3vl1_A 138 HVSEITKLKFFPSGE-ALISSSQDMQLKIWSVKDGSNPRTL---IGHRA--TVTDIAIIDRGRNVLSASLDGTIRLWECG 211 (420)
T ss_dssp SSSCEEEEEECTTSS-EEEEEETTSEEEEEETTTCCCCEEE---ECCSS--CEEEEEEETTTTEEEEEETTSCEEEEETT
T ss_pred ccCccEEEEECCCCC-EEEEEeCCCeEEEEeCCCCcCceEE---cCCCC--cEEEEEEcCCCCEEEEEcCCCcEEEeECC
Confidence 999999999999655 8899999999999999876554433 23322 12345788899999999999999999999
Q ss_pred CCceeEEecC---CCCCeEEEEE---------------------e-C-CEEEEEeCCCcEEEEECCCCceeEEEecCCCC
Q 008820 371 DGTLSCTMSG---HKSAVSTLAV---------------------C-N-GVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSG 424 (552)
Q Consensus 371 ~~~~~~~~~~---h~~~v~~l~~---------------------~-~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~ 424 (552)
+++.+..+.. |...|.++++ + + .++++++.||.|++||+++++.+..+...+..
T Consensus 212 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~ 291 (420)
T 3vl1_A 212 TGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTC 291 (420)
T ss_dssp TTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTSS
T ss_pred CCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccccCC
Confidence 9999998874 5556666666 3 2 38999999999999999999988888766556
Q ss_pred ceEEEEEEcCCCC-EEEEEECCCcEEEEeCCc---ceeeeec-ccceEEEEEe-cCCEEEEEeCCCeEEEEecCCCeeee
Q 008820 425 AVSSVLSLTAVQH-TLVVSHESGSIKVWRNDK---FMKSMQT-HKGSVFAVFL-EGKWLFTGGWDKTVSVQELAGDEFEE 498 (552)
Q Consensus 425 ~~~~~~~~s~~~~-~l~~g~~dg~i~iwd~~~---~~~~~~~-h~~~v~~v~~-~~~~l~sgs~dg~i~iwd~~~~~~~~ 498 (552)
.+.+ ++|+|++. ++++|+.||.|++||+++ ++..+.. |...+.++.+ ++++|++++.||.|++||+.+.....
T Consensus 292 ~v~~-~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~v~iw~~~~~~~~~ 370 (420)
T 3vl1_A 292 SCNS-LTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPINNVYFAAGALFVSSGFDTSIKLDIISDPESER 370 (420)
T ss_dssp CEEE-EEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTTSCEEEEEEETTEEEEEETTTEEEEEEEECCTTCCS
T ss_pred Ccee-EEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCCceEEEeCCCCEEEEecCCccEEEEeccCCCCCc
Confidence 6665 69999998 999999999999999764 3566666 6778888876 88899999999999999998642221
Q ss_pred eec----cCCCcccCcceEEEEEeC-C----eEEEEeCCCeEEEEEecC
Q 008820 499 DVI----PTGAIPCGSVITALLYWQ-G----KLFVGCADRTVKIALCNR 538 (552)
Q Consensus 499 ~~~----~~~~~~~~~~v~~l~~~~-~----~l~s~s~Dg~v~iw~~~~ 538 (552)
... ......+...|.+++|++ + .+++++.+|.+.+|+++.
T Consensus 371 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~g~l~a~g~~g~~~~~~~~~ 419 (420)
T 3vl1_A 371 PAIEFETPTFLVSNDDAVSQFCYVSDDESNGEVLEVGKNNFCALYNLSN 419 (420)
T ss_dssp CEECTTSCEEECCSSCCCCEEEEECCSSSSCEEEEEETTTEEEEEESCC
T ss_pred cceeccCccEEccCCcceEEEEEccCCCCcceEEEEcCCceEEEEeccC
Confidence 111 001123366799999984 2 499999999999999874
No 37
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.7e-33 Score=281.61 Aligned_cols=307 Identities=16% Similarity=0.179 Sum_probs=249.7
Q ss_pred cccceeeecCcc-eEEEeeCCCeEEEEEe----e---------------c----------CccceEEEEEc--CCEEEEE
Q 008820 221 DIDQARAAGGVK-DLVNGLSKGNVKFKDL----Q---------------G----------HRDCVTGLAVG--GGFLFSS 268 (552)
Q Consensus 221 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~l----~---------------~----------H~~~V~~l~~s--~~~l~s~ 268 (552)
.+..+.+++.+. .++++..++.+.+|++ . . |.+.|++++|+ +++|++|
T Consensus 47 ~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~ 126 (425)
T 1r5m_A 47 NIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGNSIVTG 126 (425)
T ss_dssp CCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSSEEEEE
T ss_pred ceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCCCEEEEE
Confidence 477888888888 8999999999999988 2 1 57799999999 8999999
Q ss_pred eCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCccccccccCCC---------
Q 008820 269 SFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKD--------- 339 (552)
Q Consensus 269 s~dg~I~iwd~~~~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~--------- 339 (552)
+.||.|++|| .+++.+..+.+|...|.+++|+|++. ++++++.|+.|++||+.++.....+........
T Consensus 127 ~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (425)
T 1r5m_A 127 VENGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGT-HIISMDVENVTILWNVISGTVMQHFELKETGGSSINAENHSG 204 (425)
T ss_dssp ETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSS-EEEEEETTCCEEEEETTTTEEEEEECCC--------------
T ss_pred eCCCeEEEEe-CCCCeeeeccCCCccEEEEEECCCCC-EEEEEecCCeEEEEECCCCcEEEEeeccccCccceeeccccC
Confidence 9999999999 77889999999999999999999655 778999999999999987644333222111100
Q ss_pred -ceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe--CCEEEEEeCCCcEEEEECCCCceeE
Q 008820 340 -WRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC--NGVLYSGSRDGTIRLWSLSDHSLLT 416 (552)
Q Consensus 340 -~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~ 416 (552)
.......+++++ ..+++++.||.|++||+++++.+..+..|...|.+++|+ +.+|++++.|+.|++||+++++.+.
T Consensus 205 ~~~~~~~~~~~~~-~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~ 283 (425)
T 1r5m_A 205 DGSLGVDVEWVDD-DKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQN 283 (425)
T ss_dssp -CCCBSCCEEEET-TEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBSCSE
T ss_pred CcceeeEEEEcCC-CEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCccce
Confidence 000122355565 468899999999999999999999999999999999999 3499999999999999999999888
Q ss_pred EEecCCCCceEEEEEEcCCCCEEEEEECCCcEEEEeCC--cceeeeecccceEEEEEe--cCCEEEEEeCCCeEEEEecC
Q 008820 417 VLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRND--KFMKSMQTHKGSVFAVFL--EGKWLFTGGWDKTVSVQELA 492 (552)
Q Consensus 417 ~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~--~~~~~~~~h~~~v~~v~~--~~~~l~sgs~dg~i~iwd~~ 492 (552)
.+..+ ...+.. +.|+|++ .+++++.||.|++||+. +.+..+..|...+.++.+ ++++|++++.||.|++||+.
T Consensus 284 ~~~~~-~~~i~~-~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~ 360 (425)
T 1r5m_A 284 CFYGH-SQSIVS-ASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQDGQKYAVAFMDGQVNVYDLK 360 (425)
T ss_dssp EECCC-SSCEEE-EEEETTT-EEEEEETTSEEEEEETTTTEEEEEEECTTCCEEEEEECTTSSEEEEEETTSCEEEEECH
T ss_pred EecCC-CccEEE-EEECCCC-EEEEEeCCCcEEEEECCCCcEeEecccCCccEEEEEEcCCCCEEEEEECCCeEEEEECC
Confidence 88765 344554 6999999 99999999999999965 466778889999999887 79999999999999999998
Q ss_pred CCe--------------------eeeeeccCCCcccCc-ceEEEEEeCC--eEEEEeCCCeEEEEEec
Q 008820 493 GDE--------------------FEEDVIPTGAIPCGS-VITALLYWQG--KLFVGCADRTVKIALCN 537 (552)
Q Consensus 493 ~~~--------------------~~~~~~~~~~~~~~~-~v~~l~~~~~--~l~s~s~Dg~v~iw~~~ 537 (552)
+.. ....+..+. .. .|.+++|+++ .|++++.||.|++|+++
T Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~ 424 (425)
T 1r5m_A 361 KLNSKSRSLYGNRDGILNPLPIPLYASYQSSQ----DNDYIFDLSWNCAGNKISVAYSLQEGSVVAIP 424 (425)
T ss_dssp HHHC--------------CEECCEEEEECCTT----CCCCEEEEEECTTSSEEEEEESSSCCEEEECC
T ss_pred CCccceeeeecccccccCcccchhhhhhcCcc----cCCceEEEEccCCCceEEEEecCceEEEEeec
Confidence 765 333333221 12 7999999953 58999999999999986
No 38
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=3.4e-33 Score=279.33 Aligned_cols=282 Identities=13% Similarity=0.139 Sum_probs=222.0
Q ss_pred EEEEeecCccceEEEEEc--C-CEEEEEeCCCcEEEEeCCCCeEEEEEe--CCCCCeEEEEEecCCCCEEEEEcCCCcEE
Q 008820 244 KFKDLQGHRDCVTGLAVG--G-GFLFSSSFDKSIHVWSLKDFSHVHTFK--GHDHKVMAVVYVDEDQPLCISGDSGGGIF 318 (552)
Q Consensus 244 ~~~~l~~H~~~V~~l~~s--~-~~l~s~s~dg~I~iwd~~~~~~~~~~~--~h~~~v~~v~~~~~~~~~l~s~~~dg~i~ 318 (552)
....+.+|.+.|++++|+ + ++|++|+.||+|++||+.+++....+. +|...|.+++|+|++..++++++.|+.|+
T Consensus 65 ~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~ 144 (383)
T 3ei3_B 65 LHRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATT 144 (383)
T ss_dssp EEEEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEE
T ss_pred eEEeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEE
Confidence 456789999999999999 5 899999999999999999888877775 69999999999997777999999999999
Q ss_pred EEeCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe--CC-EE
Q 008820 319 VWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC--NG-VL 395 (552)
Q Consensus 319 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~-~l 395 (552)
+||+... ....+.....+. ......++++++++|++|+.||.|++||+ +++.+..+.+|...|.+++|+ +. ++
T Consensus 145 iwd~~~~-~~~~~~~~~~~~--~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~v~~~~~~~~~~~~l 220 (383)
T 3ei3_B 145 LRDFSGS-VIQVFAKTDSWD--YWYCCVDVSVSRQMLATGDSTGRLLLLGL-DGHEIFKEKLHKAKVTHAEFNPRCDWLM 220 (383)
T ss_dssp EEETTSC-EEEEEECCCCSS--CCEEEEEEETTTTEEEEEETTSEEEEEET-TSCEEEEEECSSSCEEEEEECSSCTTEE
T ss_pred EEECCCC-ceEEEeccCCCC--CCeEEEEECCCCCEEEEECCCCCEEEEEC-CCCEEEEeccCCCcEEEEEECCCCCCEE
Confidence 9999842 222222111111 22334578899999999999999999999 678888999999999999999 33 89
Q ss_pred EEEeCCCcEEEEECCC----CceeEEEecCCCCceEEEEEEcC-CCCEEEEEECCCcEEEEeCCc--ceeeeeccc----
Q 008820 396 YSGSRDGTIRLWSLSD----HSLLTVLEEDSSGAVSSVLSLTA-VQHTLVVSHESGSIKVWRNDK--FMKSMQTHK---- 464 (552)
Q Consensus 396 ~s~~~dg~i~iwd~~~----~~~~~~~~~~~~~~~~~~~~~s~-~~~~l~~g~~dg~i~iwd~~~--~~~~~~~h~---- 464 (552)
++++.|++|++||+++ +..+..+. +...+.+ ++|+| ++++|++++.|+.|++||++. ....+.+|.
T Consensus 221 ~s~~~d~~i~iwd~~~~~~~~~~~~~~~--~~~~v~~-~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~ 297 (383)
T 3ei3_B 221 ATSSVDATVKLWDLRNIKDKNSYIAEMP--HEKPVNA-AYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQF 297 (383)
T ss_dssp EEEETTSEEEEEEGGGCCSTTCEEEEEE--CSSCEEE-EEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEECCBCCC
T ss_pred EEEeCCCEEEEEeCCCCCcccceEEEec--CCCceEE-EEEcCCCCCEEEEEcCCCcEEEEECCCCcccccccccccccc
Confidence 9999999999999998 55666663 3455555 69999 999999999999999999653 444554442
Q ss_pred -------------ceEEEEE--ecCCEEEEEeCCCeEEEEecCCCeeeeeeccCCCcccCcceEEEEEeCC--eEEEEeC
Q 008820 465 -------------GSVFAVF--LEGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQG--KLFVGCA 527 (552)
Q Consensus 465 -------------~~v~~v~--~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~--~l~s~s~ 527 (552)
..+..+. +++++ +|+.||.|++||+.+++....+.... +...+..++|+++ .|++|+
T Consensus 298 ~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~~~~~l~~~~---~~~~~~~~~~s~~g~~l~s~s- 371 (383)
T 3ei3_B 298 QHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGGLVHQLRDPN---AAGIISLNKFSPTGDVLASGM- 371 (383)
T ss_dssp TTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCCEEEEECBTT---BCSCCCEEEECTTSSEEEEEE-
T ss_pred ccccceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCceeeeecCCC---CCceEEEEEEecCccEEEEec-
Confidence 2233333 35665 77899999999999888766655432 2566788899953 477776
Q ss_pred CCeEEEEEecC
Q 008820 528 DRTVKIALCNR 538 (552)
Q Consensus 528 Dg~v~iw~~~~ 538 (552)
||.|++|+++.
T Consensus 372 d~~i~iw~~~~ 382 (383)
T 3ei3_B 372 GFNILIWNRED 382 (383)
T ss_dssp TTEEEEEECC-
T ss_pred CCcEEEEecCC
Confidence 99999999873
No 39
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.3e-34 Score=289.70 Aligned_cols=314 Identities=15% Similarity=0.185 Sum_probs=247.4
Q ss_pred ccceeeecCcc-eEEEe----------eCCCeEEEEEee-----------cCccceEEEEEc--CCEEEEEeCCCcEEEE
Q 008820 222 IDQARAAGGVK-DLVNG----------LSKGNVKFKDLQ-----------GHRDCVTGLAVG--GGFLFSSSFDKSIHVW 277 (552)
Q Consensus 222 ~~~~~~~~~~~-~~~~~----------~~~~~~~~~~l~-----------~H~~~V~~l~~s--~~~l~s~s~dg~I~iw 277 (552)
+..+.+++.+. .++++ ..++.+.+|++. .|...|++++|+ +++|++|+.||.|++|
T Consensus 15 v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~vw 94 (416)
T 2pm9_A 15 TATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASLQVDSKFNDLDWSHNNKIIAGALDNGSLELY 94 (416)
T ss_dssp SCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCCCCSSCEEEEEECSSSSCEEEEESSSCEEEE
T ss_pred cceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEEecCCceEEEEECCCCCeEEEEccCCeEEEe
Confidence 45566666665 66676 678889999853 478899999998 8999999999999999
Q ss_pred eCCC----CeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCC------CCccccccccCCCceeeeEEE
Q 008820 278 SLKD----FSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPL------GHEPLKKWNEEKDWRYSGIHA 347 (552)
Q Consensus 278 d~~~----~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~------~~~~~~~~~~~~~~~~~~~~~ 347 (552)
|+.+ .+.+..+.+|...|.+++|+|++..++++++.||.|++||+.+.. ..........+. ......+
T Consensus 95 ~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~--~~v~~~~ 172 (416)
T 2pm9_A 95 STNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSV--DEVISLA 172 (416)
T ss_dssp CCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSS--CCCCEEE
T ss_pred ecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCC--CCeeEEE
Confidence 9987 458888999999999999999867789999999999999998765 222221122222 1223457
Q ss_pred EeeC-CCEEEEeeCCCcEEEEECCCCceeEEecCC------CCCeEEEEEe-C--CEEEEEeCCC---cEEEEECCCC-c
Q 008820 348 LTTS-GRYLYTGSGDRTIKAWSLLDGTLSCTMSGH------KSAVSTLAVC-N--GVLYSGSRDG---TIRLWSLSDH-S 413 (552)
Q Consensus 348 ~~~~-~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h------~~~v~~l~~~-~--~~l~s~~~dg---~i~iwd~~~~-~ 413 (552)
++++ +.++++++.||.|++||+++++.+..+..| ...|.+++|+ + .++++++.|+ .|++||++++ .
T Consensus 173 ~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~ 252 (416)
T 2pm9_A 173 WNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANT 252 (416)
T ss_dssp ECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTS
T ss_pred eCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCC
Confidence 7887 679999999999999999999999988876 7899999999 3 3899999999 9999999986 5
Q ss_pred eeEEEecCCCCceEEEEEEcC-CCCEEEEEECCCcEEEEeCC--cceeeeecccceEEEEEe--cC-CEEEEEeCCCeEE
Q 008820 414 LLTVLEEDSSGAVSSVLSLTA-VQHTLVVSHESGSIKVWRND--KFMKSMQTHKGSVFAVFL--EG-KWLFTGGWDKTVS 487 (552)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~s~-~~~~l~~g~~dg~i~iwd~~--~~~~~~~~h~~~v~~v~~--~~-~~l~sgs~dg~i~ 487 (552)
.+..+...+...+.. ++|+| ++++|++++.||.|++||+. +.+..+.+|...|.++.| ++ .+|++++.||.|+
T Consensus 253 ~~~~~~~~~~~~v~~-~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~ 331 (416)
T 2pm9_A 253 PLQTLNQGHQKGILS-LDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIE 331 (416)
T ss_dssp CSBCCCSCCSSCEEE-EEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEE
T ss_pred CcEEeecCccCceeE-EEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCceEEEEECCCCCCEEEEEecCCcEE
Confidence 566665123455555 68998 99999999999999999965 567788899999998887 66 8999999999999
Q ss_pred EEecCCCeeeeeecc------------------------------CCCcccCcceEEEEEeC-Ce-EEEEeCCCeEEEEE
Q 008820 488 VQELAGDEFEEDVIP------------------------------TGAIPCGSVITALLYWQ-GK-LFVGCADRTVKIAL 535 (552)
Q Consensus 488 iwd~~~~~~~~~~~~------------------------------~~~~~~~~~v~~l~~~~-~~-l~s~s~Dg~v~iw~ 535 (552)
+||+.+......... .....+...+.+++|++ +. |++++.||.|+||+
T Consensus 332 iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~la~~~~d~~v~~w~ 411 (416)
T 2pm9_A 332 VQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKEKPSVFHLQAPTWYGEPSPAAHWAFGGKLVQITPDGKGVSITN 411 (416)
T ss_dssp EEESCCCCCSSCC----------------------CCSCCCSSCCCCCSTTCCCSCCCEEETTTEEECBCTTSSCBCCBC
T ss_pred EEEccCCCCCcccccccccccCCcccccccccccccccccccccccCCccccCCccceEEeeCCeEEEEeCCCCeEEEEE
Confidence 999987643322110 00001345677888995 44 77899999999999
Q ss_pred ecC
Q 008820 536 CNR 538 (552)
Q Consensus 536 ~~~ 538 (552)
+..
T Consensus 412 ~~~ 414 (416)
T 2pm9_A 412 PKI 414 (416)
T ss_dssp CCC
T ss_pred ecc
Confidence 873
No 40
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=7.7e-33 Score=267.51 Aligned_cols=266 Identities=18% Similarity=0.278 Sum_probs=220.4
Q ss_pred ccccceeeecCcceEEEeeCCCeEEEEEe---------ecCccceEEEEEc--CCEEEEEeCCCcEEEEeCCCCeEEEEE
Q 008820 220 ADIDQARAAGGVKDLVNGLSKGNVKFKDL---------QGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTF 288 (552)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l---------~~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~~~~~~~ 288 (552)
..+..+.+++.+..++++..++.+++|++ .+|..+|.+++|+ +++|++|+.|++|++||+.+++.+..+
T Consensus 14 ~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~ 93 (304)
T 2ynn_A 14 DRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDF 93 (304)
T ss_dssp SCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred CceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCCcEEEEE
Confidence 45888999999999999999999999974 5799999999998 899999999999999999999999999
Q ss_pred eCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCccccccccCCCceeeeEEEEee-CCCEEEEeeCCCcEEEE
Q 008820 289 KGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTT-SGRYLYTGSGDRTIKAW 367 (552)
Q Consensus 289 ~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~sgs~dg~i~iw 367 (552)
.+|.+.|.+++|+|++. ++++|+.|++|++||++++.. ....+..+.. .....+++| ++..|++|+.|++|++|
T Consensus 94 ~~h~~~v~~~~~~~~~~-~l~sgs~D~~v~lWd~~~~~~--~~~~~~~h~~--~v~~v~~~p~~~~~l~sgs~D~~v~iw 168 (304)
T 2ynn_A 94 EAHPDYIRSIAVHPTKP-YVLSGSDDLTVKLWNWENNWA--LEQTFEGHEH--FVMCVAFNPKDPSTFASGCLDRTVKVW 168 (304)
T ss_dssp ECCSSCEEEEEECSSSS-EEEEEETTSCEEEEEGGGTTE--EEEEECCCCS--CEEEEEECTTCTTEEEEEETTSEEEEE
T ss_pred eCCCCcEEEEEEcCCCC-EEEEECCCCeEEEEECCCCcc--hhhhhcccCC--cEEEEEECCCCCCEEEEEeCCCeEEEE
Confidence 99999999999999765 789999999999999986432 1222333322 123446777 56799999999999999
Q ss_pred ECCCCceeEEec-CCCCCeEEEEEe---C-CEEEEEeCCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEE
Q 008820 368 SLLDGTLSCTMS-GHKSAVSTLAVC---N-GVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVS 442 (552)
Q Consensus 368 d~~~~~~~~~~~-~h~~~v~~l~~~---~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g 442 (552)
|++++.....+. +|...+..+.|+ + .+|++|+.|++|++||+++++++..+..|. ..+.. ++|+|++.+|++|
T Consensus 169 d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~-~~v~~-~~~~p~~~~l~s~ 246 (304)
T 2ynn_A 169 SLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHM-SNVSF-AVFHPTLPIIISG 246 (304)
T ss_dssp ETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCS-SCEEE-EEECSSSSEEEEE
T ss_pred ECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCC-CCEEE-EEECCCCCEEEEE
Confidence 998887766654 566889999997 2 389999999999999999999999998774 44444 6899999999999
Q ss_pred ECCCcEEEEeCC--cceeeeecccceEEEEEe--cCC--EEEEEeCCCeEEEEecCC
Q 008820 443 HESGSIKVWRND--KFMKSMQTHKGSVFAVFL--EGK--WLFTGGWDKTVSVQELAG 493 (552)
Q Consensus 443 ~~dg~i~iwd~~--~~~~~~~~h~~~v~~v~~--~~~--~l~sgs~dg~i~iwd~~~ 493 (552)
+.||+|++||.. +..+.+..|...+.++++ ++. ++++|+.| .+.+|++.+
T Consensus 247 s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~asg~~~-g~~~~~~~~ 302 (304)
T 2ynn_A 247 SEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDN-GFTVLSLGN 302 (304)
T ss_dssp ETTSCEEEEETTTCCEEEEECCSSSSEEEEEECTTCGGGCEEEEETT-EEEEEECC-
T ss_pred cCCCeEEEEECCCCceeeeccCCCccEEEEEECCCCCceEEEEecCC-ceEEEEecc
Confidence 999999999965 577888899999999885 443 57777755 577887764
No 41
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.7e-33 Score=271.71 Aligned_cols=268 Identities=19% Similarity=0.276 Sum_probs=205.3
Q ss_pred CccccceeeecCcceEEEeeCCCeEEEEEe------------ec-CccceEEEEEc--CCEEEEEeCCCcEEEEeCC---
Q 008820 219 GADIDQARAAGGVKDLVNGLSKGNVKFKDL------------QG-HRDCVTGLAVG--GGFLFSSSFDKSIHVWSLK--- 280 (552)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l------------~~-H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~--- 280 (552)
...+..+.+++. .++++..++.+++|++ .+ |.+.|++++|+ +++|++|+.|++|++||+.
T Consensus 14 ~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~ 91 (330)
T 2hes_X 14 KEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESA 91 (330)
T ss_dssp SSCEEEEEEETT--EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEEEEEC----
T ss_pred CCceeeeccCCC--EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCc
Confidence 344667777665 8889999999998864 23 99999999999 8999999999999999984
Q ss_pred ----CCeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCC-CCCccccccccCCCceeeeEEEEeeCCCEE
Q 008820 281 ----DFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFP-LGHEPLKKWNEEKDWRYSGIHALTTSGRYL 355 (552)
Q Consensus 281 ----~~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 355 (552)
+.+.+..+.+|...|.+++|+|++. +|++|+.|++|++||++.. .....+..+..+.. .....+++|++++|
T Consensus 92 ~~~~~~~~~~~~~~h~~~V~~v~~sp~g~-~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~--~v~~v~~~p~~~~l 168 (330)
T 2hes_X 92 DRTFEMDLLAIIEGHENEVKGVAWSNDGY-YLATCSRDKSVWIWETDESGEEYECISVLQEHSQ--DVKHVIWHPSEALL 168 (330)
T ss_dssp ---CCCEEEEEEC----CEEEEEECTTSC-EEEEEETTSCEEEEECCTTCCCCEEEEEECCCSS--CEEEEEECSSSSEE
T ss_pred CccccceeEEEEcCCCCcEEEEEECCCCC-EEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCC--ceEEEEECCCCCEE
Confidence 3467788999999999999999755 8899999999999999543 22233344444432 12334788899999
Q ss_pred EEeeCCCcEEEEECCCC--ceeEEecCCCCCeEEEEEeC---C-EEEEEeCCCcEEEEECCCC--------ceeEEEecC
Q 008820 356 YTGSGDRTIKAWSLLDG--TLSCTMSGHKSAVSTLAVCN---G-VLYSGSRDGTIRLWSLSDH--------SLLTVLEED 421 (552)
Q Consensus 356 ~sgs~dg~i~iwd~~~~--~~~~~~~~h~~~v~~l~~~~---~-~l~s~~~dg~i~iwd~~~~--------~~~~~~~~~ 421 (552)
++|+.|++|++||..++ +++..+.+|...|.+++|++ + .|++|+.|++|++||++++ .....+...
T Consensus 169 ~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~ 248 (330)
T 2hes_X 169 ASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDV 248 (330)
T ss_dssp EEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEEEEECCSC
T ss_pred EEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeEEeeecccc
Confidence 99999999999999876 67888999999999999993 3 7999999999999999764 233444443
Q ss_pred CCCceEEEEEEcCCCCEEEEEECCCcEEEEeCCcc----e-eeeecccc-eEEEEEe----cCCEEEEEeCCCeEEEEec
Q 008820 422 SSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDKF----M-KSMQTHKG-SVFAVFL----EGKWLFTGGWDKTVSVQEL 491 (552)
Q Consensus 422 ~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~~~----~-~~~~~h~~-~v~~v~~----~~~~l~sgs~dg~i~iwd~ 491 (552)
+...+.. ++|++++ +|++++.||.|++||.... . ....+|.. .|.++.| ++++|++|+.||+|++||+
T Consensus 249 h~~~v~~-v~~s~~~-~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s~Dg~v~~W~~ 326 (330)
T 2hes_X 249 HKRQVYN-VAWGFNG-LIASVGADGVLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNGKTILATGGDDGIVNFWSL 326 (330)
T ss_dssp CSSCEEE-EEECTTS-CEEEEETTSCEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC-----CCEEEEETTSEEEEEEC
T ss_pred cccceEE-EEEcCCC-EEEEEeCCCEEEEEEcCCCceEEEeccccccccceEEEEEEecCCCceEEEEecCCCcEEEEEe
Confidence 4555665 6888655 8999999999999996432 2 23357877 8988876 4789999999999999998
Q ss_pred CC
Q 008820 492 AG 493 (552)
Q Consensus 492 ~~ 493 (552)
++
T Consensus 327 ~~ 328 (330)
T 2hes_X 327 EK 328 (330)
T ss_dssp --
T ss_pred cc
Confidence 64
No 42
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7e-34 Score=289.57 Aligned_cols=291 Identities=14% Similarity=0.165 Sum_probs=220.9
Q ss_pred eEEEEEe-ecCccceEEEEEc---CCEEEEEeCCCcEEEEeCCC---Ce---EEEEEeCCCCCeEEEEEecCCCCEEEEE
Q 008820 242 NVKFKDL-QGHRDCVTGLAVG---GGFLFSSSFDKSIHVWSLKD---FS---HVHTFKGHDHKVMAVVYVDEDQPLCISG 311 (552)
Q Consensus 242 ~~~~~~l-~~H~~~V~~l~~s---~~~l~s~s~dg~I~iwd~~~---~~---~~~~~~~h~~~v~~v~~~~~~~~~l~s~ 311 (552)
...+..+ .+|.++|++++|+ +++|++|+.||+|++||+.+ +. ....+ +|...|.+++|+|++ .+++++
T Consensus 52 g~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~-~~l~s~ 129 (437)
T 3gre_A 52 GKLIATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTY-DCSSTVTQITMIPNF-DAFAVS 129 (437)
T ss_dssp CCEEEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEE-ECSSCEEEEEECTTS-SEEEEE
T ss_pred ceEEeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeec-cCCCCEEEEEEeCCC-CEEEEE
Confidence 3456677 8999999999998 57999999999999999876 33 23343 499999999999854 588999
Q ss_pred cCCCcEEEEeCC---CCCCCcccc-----ccc--c--CCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCceeEEec
Q 008820 312 DSGGGIFVWSFS---FPLGHEPLK-----KWN--E--EKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMS 379 (552)
Q Consensus 312 ~~dg~i~vwd~~---~~~~~~~~~-----~~~--~--~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~ 379 (552)
+.||.|++||++ .+....... ... . ...........++++++++++|+.||.|++||+++++++..+.
T Consensus 130 s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~ 209 (437)
T 3gre_A 130 SKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIE 209 (437)
T ss_dssp ETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred eCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEc
Confidence 999999999995 222111111 110 0 1111111112245678899999999999999999999999998
Q ss_pred C--CCCCeEEEEEe--CCEEEEEeCCCcEEEEECCCCceeEEEecCCCCceEEEEEE----cCCCCEEEEEECCCcEEEE
Q 008820 380 G--HKSAVSTLAVC--NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSL----TAVQHTLVVSHESGSIKVW 451 (552)
Q Consensus 380 ~--h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~----s~~~~~l~~g~~dg~i~iw 451 (552)
+ |...|++++|+ +.+|++|+.||+|++||+++++++..+...+...+.+ +++ ++++.++++|+.||.|++|
T Consensus 210 ~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~-~~~~~~~s~~~~~l~s~~~dg~i~iw 288 (437)
T 3gre_A 210 NSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITH-VEVCQFYGKNSVIVVGGSSKTFLTIW 288 (437)
T ss_dssp CCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEE-EEECTTTCTTEEEEEEESTTEEEEEE
T ss_pred cCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEE-EEeccccCCCccEEEEEcCCCcEEEE
Confidence 8 89999999999 4499999999999999999999999887444444444 544 4568899999999999999
Q ss_pred eCCc--ceeeeec--------------------------ccceEEEEEe-cCCEEEEEeCCCeEEEEecCCCeeeeeecc
Q 008820 452 RNDK--FMKSMQT--------------------------HKGSVFAVFL-EGKWLFTGGWDKTVSVQELAGDEFEEDVIP 502 (552)
Q Consensus 452 d~~~--~~~~~~~--------------------------h~~~v~~v~~-~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~ 502 (552)
|+.+ ....+.+ |...|.++.+ ++++|++|+.||.|++||+.+++....+..
T Consensus 289 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~ 368 (437)
T 3gre_A 289 NFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVSNDKILLTDEATSSIVMFSLNELSSSKAVIS 368 (437)
T ss_dssp ETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEETTEEEEEEGGGTEEEEEETTCGGGCEEEEC
T ss_pred EcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEECCceEEEecCCCCeEEEEECCCcccceEEec
Confidence 9753 3333332 5566777777 678999999999999999998766554432
Q ss_pred CC--------------------------------CcccCcceEEEEEeCC----eEEEEeCCCeEEEEE
Q 008820 503 TG--------------------------------AIPCGSVITALLYWQG----KLFVGCADRTVKIAL 535 (552)
Q Consensus 503 ~~--------------------------------~~~~~~~v~~l~~~~~----~l~s~s~Dg~v~iw~ 535 (552)
+. ...+...|+++++.+. .|++|+.||.|+||+
T Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~~~~~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 369 PSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEVDETPLLVACDNSGLIGIFQ 437 (437)
T ss_dssp C--CCCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEEESSSSEEEEEEETTSCEEEEC
T ss_pred ccccCceEEEEEeecceEEEEEecccccccccCcccccccceeeEeeeccCCceEEEEEcCCceEEEeC
Confidence 10 0114778999999854 599999999999995
No 43
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.2e-32 Score=268.51 Aligned_cols=282 Identities=15% Similarity=0.206 Sum_probs=233.6
Q ss_pred eEEEEEeecCccceEEEEEc--CCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEE
Q 008820 242 NVKFKDLQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFV 319 (552)
Q Consensus 242 ~~~~~~l~~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~v 319 (552)
..+...+.+|.+.|++++|+ +++|++|+.||.|++||+.+++.+..+.+|...|.+++|+|++ .++++++.||.|++
T Consensus 22 ~~~~~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~s~~~dg~i~i 100 (369)
T 3zwl_B 22 HMKAIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFT-KYCVTGSADYSIKL 100 (369)
T ss_dssp SEEEEEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTS-SEEEEEETTTEEEE
T ss_pred ccccEEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCC-CEEEEEeCCCeEEE
Confidence 44567799999999999999 8999999999999999999999999999999999999999965 47899999999999
Q ss_pred EeCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCC-----CcEEEEECCCCc-----------eeEEecCCCC
Q 008820 320 WSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGD-----RTIKAWSLLDGT-----------LSCTMSGHKS 383 (552)
Q Consensus 320 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~d-----g~i~iwd~~~~~-----------~~~~~~~h~~ 383 (552)
||+.+++....+. . . ......+++++++++++++.+ |.|++||+..+. ....+..|..
T Consensus 101 wd~~~~~~~~~~~---~-~--~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (369)
T 3zwl_B 101 WDVSNGQCVATWK---S-P--VPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEG 174 (369)
T ss_dssp EETTTCCEEEEEE---C-S--SCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTT
T ss_pred EECCCCcEEEEee---c-C--CCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcC
Confidence 9998765443333 1 1 122345788999999999999 999999997653 3445556666
Q ss_pred --CeEEEEEe--CCEEEEEeCCCcEEEEECCC-CceeEEEecCCCCceEEEEEEcCCCCEEEEEECCCcEEEEeCCc--c
Q 008820 384 --AVSTLAVC--NGVLYSGSRDGTIRLWSLSD-HSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDK--F 456 (552)
Q Consensus 384 --~v~~l~~~--~~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~~--~ 456 (552)
.+.+++|+ +..+++++.||.|++||+++ ++.+..+..+ ...+.. ++|+|++++|++++.||.|++||+.. .
T Consensus 175 ~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-~~~v~~-~~~~~~~~~l~~~~~d~~i~v~d~~~~~~ 252 (369)
T 3zwl_B 175 LDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLH-EKSISD-MQFSPDLTYFITSSRDTNSFLVDVSTLQV 252 (369)
T ss_dssp CCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECC-SSCEEE-EEECTTSSEEEEEETTSEEEEEETTTCCE
T ss_pred ccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecC-CCceeE-EEECCCCCEEEEecCCceEEEEECCCCce
Confidence 89999999 44999999999999999998 6777777765 344555 69999999999999999999999764 4
Q ss_pred eeeeecccceEEEEEe--cCCEEEEEeCCC--------------eEEEEecCCCeeeeeeccCCCcccCcceEEEEEeCC
Q 008820 457 MKSMQTHKGSVFAVFL--EGKWLFTGGWDK--------------TVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQG 520 (552)
Q Consensus 457 ~~~~~~h~~~v~~v~~--~~~~l~sgs~dg--------------~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~ 520 (552)
...+. +...+.++.+ +++++++++.++ .+++||..+++....+..+ ...|.+++|+++
T Consensus 253 ~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~-----~~~v~~~~~s~~ 326 (369)
T 3zwl_B 253 LKKYE-TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGH-----FGPLNTVAISPQ 326 (369)
T ss_dssp EEEEE-CSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEECC-----SSCEEEEEECTT
T ss_pred eeeec-CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecc-----cCcEEEEEECCC
Confidence 44444 6777877776 899999999988 8999999988776665432 667999999953
Q ss_pred --eEEEEeCCCeEEEEEecC
Q 008820 521 --KLFVGCADRTVKIALCNR 538 (552)
Q Consensus 521 --~l~s~s~Dg~v~iw~~~~ 538 (552)
.|++++.||.|++|+++.
T Consensus 327 ~~~l~s~~~dg~v~iw~~~~ 346 (369)
T 3zwl_B 327 GTSYASGGEDGFIRLHHFEK 346 (369)
T ss_dssp SSEEEEEETTSEEEEEEECH
T ss_pred CCEEEEEcCCCeEEEEECcc
Confidence 599999999999999973
No 44
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=1.9e-32 Score=295.62 Aligned_cols=283 Identities=23% Similarity=0.356 Sum_probs=221.2
Q ss_pred EEEeecCccceEEEEEc---CCEEEEEeCCCcEEEEeCCC-----CeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCc
Q 008820 245 FKDLQGHRDCVTGLAVG---GGFLFSSSFDKSIHVWSLKD-----FSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGG 316 (552)
Q Consensus 245 ~~~l~~H~~~V~~l~~s---~~~l~s~s~dg~I~iwd~~~-----~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~ 316 (552)
...+++|.+.|++++|+ +++|+||+.|++|++||+.+ +.....+.+|...|.+++|+|++. +|++|+.||+
T Consensus 375 ~~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~-~l~sgs~Dg~ 453 (694)
T 3dm0_A 375 KGTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQ-FALSGSWDGE 453 (694)
T ss_dssp EEEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSS-EEEEEETTSE
T ss_pred hhhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCC-EEEEEeCCCc
Confidence 34689999999999998 57999999999999999875 356678899999999999999654 8899999999
Q ss_pred EEEEeCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCceeEEe---cCCCCCeEEEEEeC-
Q 008820 317 IFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTM---SGHKSAVSTLAVCN- 392 (552)
Q Consensus 317 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~---~~h~~~v~~l~~~~- 392 (552)
|++||+.++... ..+..|... ....++++++++|++|+.|++|++||.......... .+|...|.+++|++
T Consensus 454 v~vwd~~~~~~~---~~~~~h~~~--v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 528 (694)
T 3dm0_A 454 LRLWDLAAGVST---RRFVGHTKD--VLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPN 528 (694)
T ss_dssp EEEEETTTTEEE---EEEECCSSC--EEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSC
T ss_pred EEEEECCCCcce---eEEeCCCCC--EEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCC
Confidence 999999876433 333333321 223578889999999999999999998655433322 46889999999983
Q ss_pred ---CEEEEEeCCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEECCCcEEEEeCCcc--eeeeecccceE
Q 008820 393 ---GVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDKF--MKSMQTHKGSV 467 (552)
Q Consensus 393 ---~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~~~--~~~~~~h~~~v 467 (552)
..+++++.|++|++||+++++....+..| .+.+.+ ++++|++++|++|+.||.|++||+.+. +..+. +...+
T Consensus 529 ~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h-~~~v~~-v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~-~~~~v 605 (694)
T 3dm0_A 529 TLQPTIVSASWDKTVKVWNLSNCKLRSTLAGH-TGYVST-VAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLE-ANSVI 605 (694)
T ss_dssp SSSCEEEEEETTSCEEEEETTTCCEEEEECCC-SSCEEE-EEECTTSSEEEEEETTSBCEEEETTTTEEEECCB-CSSCE
T ss_pred CCcceEEEEeCCCeEEEEECCCCcEEEEEcCC-CCCEEE-EEEeCCCCEEEEEeCCCeEEEEECCCCceEEEec-CCCcE
Confidence 37999999999999999999988888776 345555 699999999999999999999997643 33443 34568
Q ss_pred EEEEe--cCCEEEEEeCCCeEEEEecCCCeeeeeeccCCCc--------------ccCcceEEEEEeC--CeEEEEeCCC
Q 008820 468 FAVFL--EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAI--------------PCGSVITALLYWQ--GKLFVGCADR 529 (552)
Q Consensus 468 ~~v~~--~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~--------------~~~~~v~~l~~~~--~~l~s~s~Dg 529 (552)
.++.| ++.+|++++ |+.|++||++++.....+...... .....+++++|++ ..|++|+.||
T Consensus 606 ~~~~~sp~~~~l~~~~-~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg 684 (694)
T 3dm0_A 606 HALCFSPNRYWLCAAT-EHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYTDG 684 (694)
T ss_dssp EEEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEECCCCC----------------CCCCEEEEEECTTSSEEEEEETTS
T ss_pred EEEEEcCCCcEEEEEc-CCCEEEEECCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEEEEcCCC
Confidence 87776 677776665 667999999988766544321110 0112378899995 3599999999
Q ss_pred eEEEEEec
Q 008820 530 TVKIALCN 537 (552)
Q Consensus 530 ~v~iw~~~ 537 (552)
.|++|++.
T Consensus 685 ~i~iW~i~ 692 (694)
T 3dm0_A 685 VIRVWGIG 692 (694)
T ss_dssp EEEEEEC-
T ss_pred eEEEEecc
Confidence 99999986
No 45
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=4e-32 Score=263.57 Aligned_cols=269 Identities=16% Similarity=0.260 Sum_probs=226.1
Q ss_pred CCccccceeeecCcceEEEeeCCCeEEEEE---------eecCccceEEEEEc--CCEEEEEeCCCcEEEEeCCCCeEEE
Q 008820 218 DGADIDQARAAGGVKDLVNGLSKGNVKFKD---------LQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVH 286 (552)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------l~~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~~~~~ 286 (552)
+...+..+.+++.++.++++..++.+++|+ +.+|...|.+++|+ +++|++|+.|+.|++||+.+++.+.
T Consensus 22 h~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~ 101 (312)
T 4ery_A 22 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLK 101 (312)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEE
T ss_pred cCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCcEEE
Confidence 344588889999999999999999999987 46899999999999 8999999999999999999999999
Q ss_pred EEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEE
Q 008820 287 TFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKA 366 (552)
Q Consensus 287 ~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~i 366 (552)
.+.+|...|.+++|+|++. ++++|+.|+.|++||++++.... .+..+.. .....+++++++++++|+.||.|++
T Consensus 102 ~~~~~~~~v~~~~~~~~~~-~l~s~~~d~~i~iwd~~~~~~~~---~~~~~~~--~v~~~~~~~~~~~l~~~~~d~~i~~ 175 (312)
T 4ery_A 102 TLKGHSNYVFCCNFNPQSN-LIVSGSFDESVRIWDVKTGKCLK---TLPAHSD--PVSAVHFNRDGSLIVSSSYDGLCRI 175 (312)
T ss_dssp EEECCSSCEEEEEECSSSS-EEEEEETTSCEEEEETTTCCEEE---EECCCSS--CEEEEEECTTSSEEEEEETTSCEEE
T ss_pred EEcCCCCCEEEEEEcCCCC-EEEEEeCCCcEEEEECCCCEEEE---EecCCCC--cEEEEEEcCCCCEEEEEeCCCcEEE
Confidence 9999999999999999654 78999999999999998764332 2222222 1234577889999999999999999
Q ss_pred EECCCCceeEEec-CCCCCeEEEEEe--CCEEEEEeCCCcEEEEECCCCceeEEEecCCCCceE-EEEEEcCCCCEEEEE
Q 008820 367 WSLLDGTLSCTMS-GHKSAVSTLAVC--NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVS-SVLSLTAVQHTLVVS 442 (552)
Q Consensus 367 wd~~~~~~~~~~~-~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~~s~~~~~l~~g 442 (552)
||+++++.+..+. .+...+.+++|+ +.++++++.|+.|++||+++++.+..+..+...... ......+++.++++|
T Consensus 176 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg 255 (312)
T 4ery_A 176 WDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSG 255 (312)
T ss_dssp EETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSSCEEEEC
T ss_pred EECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCCcEEEEE
Confidence 9999998887764 566789999999 349999999999999999999999888776443222 222345778999999
Q ss_pred ECCCcEEEEeCC--cceeeeecccceEEEEEe--cCCEEEEEe--CCCeEEEEecC
Q 008820 443 HESGSIKVWRND--KFMKSMQTHKGSVFAVFL--EGKWLFTGG--WDKTVSVQELA 492 (552)
Q Consensus 443 ~~dg~i~iwd~~--~~~~~~~~h~~~v~~v~~--~~~~l~sgs--~dg~i~iwd~~ 492 (552)
+.||.|++||+. +.+..+.+|...|.++++ ++.++++++ .|++|++|+.+
T Consensus 256 ~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 256 SEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKSD 311 (312)
T ss_dssp CTTSCEEEEETTTCCEEEEECCCSSCEEEEEECSSSSEEEEEECTTTCCEEEEECC
T ss_pred CCCCEEEEEECCCchhhhhhhccCCcEEEEeecCcCCceEEEEccCCccEEEecCC
Confidence 999999999965 467788999999999887 889999987 69999999864
No 46
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=1.9e-32 Score=274.73 Aligned_cols=265 Identities=19% Similarity=0.334 Sum_probs=214.4
Q ss_pred CccccceeeecCcceEEEeeCCCeEEEEEe---------ecCc------------------cceEEEEEc--CCEEEEEe
Q 008820 219 GADIDQARAAGGVKDLVNGLSKGNVKFKDL---------QGHR------------------DCVTGLAVG--GGFLFSSS 269 (552)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l---------~~H~------------------~~V~~l~~s--~~~l~s~s 269 (552)
...+..+.++++++.++++. ++.+++|.+ .+|. ..|++++|+ +++|++|+
T Consensus 64 ~~~V~~v~fspdg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s~~ 142 (393)
T 1erj_A 64 TSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATGA 142 (393)
T ss_dssp SSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEEEE
T ss_pred CCEEEEEEECCCCCEEEEEc-CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEEEEc
Confidence 34578888999999888875 567777763 3332 249999999 89999999
Q ss_pred CCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCccccccccCCCceeeeEEEEe
Q 008820 270 FDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALT 349 (552)
Q Consensus 270 ~dg~I~iwd~~~~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (552)
.|++|++||+.+++.+..+.+|...|.+++|+|++. ++++++.|++|++||++++.....+. ... .....+++
T Consensus 143 ~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~-~l~s~s~d~~v~iwd~~~~~~~~~~~---~~~---~v~~~~~~ 215 (393)
T 1erj_A 143 EDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGD-KLVSGSGDRTVRIWDLRTGQCSLTLS---IED---GVTTVAVS 215 (393)
T ss_dssp TTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSS-EEEEEETTSEEEEEETTTTEEEEEEE---CSS---CEEEEEEC
T ss_pred CCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCC-EEEEecCCCcEEEEECCCCeeEEEEE---cCC---CcEEEEEE
Confidence 999999999999999999999999999999999765 77999999999999998764332221 111 12334677
Q ss_pred e-CCCEEEEeeCCCcEEEEECCCCceeEEe-------cCCCCCeEEEEEe--CCEEEEEeCCCcEEEEECCCCc------
Q 008820 350 T-SGRYLYTGSGDRTIKAWSLLDGTLSCTM-------SGHKSAVSTLAVC--NGVLYSGSRDGTIRLWSLSDHS------ 413 (552)
Q Consensus 350 ~-~~~~l~sgs~dg~i~iwd~~~~~~~~~~-------~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~------ 413 (552)
+ +++++++|+.||.|++||+++++.+..+ .+|...|.+++|+ +.+|++|+.|++|++||+++..
T Consensus 216 ~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~ 295 (393)
T 1erj_A 216 PGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSK 295 (393)
T ss_dssp STTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC----------
T ss_pred CCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCccccc
Confidence 7 7889999999999999999999888776 5799999999999 3499999999999999997643
Q ss_pred ------eeEEEecCCCCceEEEEEEcCCCCEEEEEECCCcEEEEeCC--cceeeeecccceEEEEEe--------cCCEE
Q 008820 414 ------LLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRND--KFMKSMQTHKGSVFAVFL--------EGKWL 477 (552)
Q Consensus 414 ------~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~--~~~~~~~~h~~~v~~v~~--------~~~~l 477 (552)
+...+..| ...+.+ +++++++.+|++|+.|+.|++||.. +.+..+.+|...|.++.+ ++.+|
T Consensus 296 ~~~~~~~~~~~~~h-~~~v~~-~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~~v~~v~~~~~~~~~p~~~~l 373 (393)
T 1erj_A 296 TPNSGTCEVTYIGH-KDFVLS-VATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVF 373 (393)
T ss_dssp -----CEEEEEECC-SSCEEE-EEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSCTTCTTCEEE
T ss_pred CCCCCcceEEEecc-cCcEEE-EEECCCCCEEEEEeCCCeEEEEECCCCeEEEEECCCCCCEEEEEecCCcCcCCCCCEE
Confidence 34445544 344555 6999999999999999999999964 567788999999999986 36799
Q ss_pred EEEeCCCeEEEEecCC
Q 008820 478 FTGGWDKTVSVQELAG 493 (552)
Q Consensus 478 ~sgs~dg~i~iwd~~~ 493 (552)
++|+.||+|++|++..
T Consensus 374 ~sgs~Dg~i~iW~~~~ 389 (393)
T 1erj_A 374 ATGSGDCKARIWKYKK 389 (393)
T ss_dssp EEEETTSEEEEEEEEE
T ss_pred EEECCCCcEEECcccc
Confidence 9999999999999864
No 47
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=3.6e-33 Score=276.02 Aligned_cols=267 Identities=15% Similarity=0.172 Sum_probs=209.2
Q ss_pred ccccceeeecCcceEEEeeC------CCeEEEEE-------------eecCccceEEEEEc-CCEEEEEeCCCcEEEEeC
Q 008820 220 ADIDQARAAGGVKDLVNGLS------KGNVKFKD-------------LQGHRDCVTGLAVG-GGFLFSSSFDKSIHVWSL 279 (552)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~------~~~~~~~~-------------l~~H~~~V~~l~~s-~~~l~s~s~dg~I~iwd~ 279 (552)
..+.++++++++..++++.. ++.+.+|. ..+|.+.|++++|+ ...+++++.||+|+|||+
T Consensus 43 ~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~~l~~s~dg~v~lWd~ 122 (357)
T 4g56_B 43 VQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKGILVASDSGAVELWEI 122 (357)
T ss_dssp SEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTEEEEEETTSCEEEC--
T ss_pred CCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCCEEEEECCCEEEEeec
Confidence 45889999999999999886 56677764 24689999999999 677888999999999999
Q ss_pred CCCeEEE----EEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCccccccccCCCceeeeEEEEeeCCC-E
Q 008820 280 KDFSHVH----TFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGR-Y 354 (552)
Q Consensus 280 ~~~~~~~----~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 354 (552)
.+++... ...+|...|++++|+|++. +|++|+.|++|++||++++.... .+..+.. . ....+++++++ .
T Consensus 123 ~~~~~~~~~~~~~~~h~~~V~~v~~spdg~-~l~sgs~dg~v~iwd~~~~~~~~---~~~~h~~-~-v~~v~~s~~~~~~ 196 (357)
T 4g56_B 123 LEKESLLVNKFAKYEHDDIVKTLSVFSDGT-QAVSGGKDFSVKVWDLSQKAVLK---SYNAHSS-E-VNCVAACPGKDTI 196 (357)
T ss_dssp ------CCCCEEECCCSSCEEEEEECSSSS-EEEEEETTSCEEEEETTTTEEEE---EECCCSS-C-EEEEEECTTCSSC
T ss_pred cccceeEEEeeccCCCCCCEEEEEECCCCC-EEEEEeCCCeEEEEECCCCcEEE---EEcCCCC-C-EEEEEEccCCCce
Confidence 8876543 3458999999999999665 78999999999999998764333 3333332 1 22346677765 8
Q ss_pred EEEeeCCCcEEEEECCCCceeEEe--cCCCCCeEEEEEe---CCEEEEEeCCCcEEEEECCCCceeEEEecCCCCceEEE
Q 008820 355 LYTGSGDRTIKAWSLLDGTLSCTM--SGHKSAVSTLAVC---NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSV 429 (552)
Q Consensus 355 l~sgs~dg~i~iwd~~~~~~~~~~--~~h~~~v~~l~~~---~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 429 (552)
+++++.||.|++||++++++...+ ..|...+++++|+ +.+|++|+.|+.|++||+++++.+..+..+. ..+.+
T Consensus 197 ~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~-~~v~~- 274 (357)
T 4g56_B 197 FLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHS-QNITG- 274 (357)
T ss_dssp EEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCS-SCEEE-
T ss_pred eeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEeccc-eeEEE-
Confidence 999999999999999998877655 4567789999998 2389999999999999999999999888763 44555
Q ss_pred EEEcCCC-CEEEEEECCCcEEEEeCCc-ceeeeecccceEEEEEe---cCCEEEEEeCCCeEEEEecCCC
Q 008820 430 LSLTAVQ-HTLVVSHESGSIKVWRNDK-FMKSMQTHKGSVFAVFL---EGKWLFTGGWDKTVSVQELAGD 494 (552)
Q Consensus 430 ~~~s~~~-~~l~~g~~dg~i~iwd~~~-~~~~~~~h~~~v~~v~~---~~~~l~sgs~dg~i~iwd~~~~ 494 (552)
++|+|++ ++|++|+.|++|+|||... ......+|...|++++| ++.+|++++.||+|++||+.+.
T Consensus 275 l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~ 344 (357)
T 4g56_B 275 LAYSYHSSPFLASISEDCTVAVLDADFSEVFRDLSHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPSE 344 (357)
T ss_dssp EEECSSSSCCEEEEETTSCEEEECTTSCEEEEECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC--
T ss_pred EEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEECCCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCC
Confidence 6999987 5799999999999999653 23344589999999986 6889999999999999999754
No 48
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=5.8e-32 Score=266.12 Aligned_cols=266 Identities=17% Similarity=0.299 Sum_probs=209.0
Q ss_pred ccccceee-----ec-CcceEEEeeCCCeEEEEEe----------------ecCccceEEEEEc--CCEEEEEeCCCcEE
Q 008820 220 ADIDQARA-----AG-GVKDLVNGLSKGNVKFKDL----------------QGHRDCVTGLAVG--GGFLFSSSFDKSIH 275 (552)
Q Consensus 220 ~~~~~~~~-----~~-~~~~~~~~~~~~~~~~~~l----------------~~H~~~V~~l~~s--~~~l~s~s~dg~I~ 275 (552)
..+..+.+ .+ ++..++++..++.+++|++ .+|...|++++|+ +.++++|+.|++|+
T Consensus 22 ~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~ 101 (343)
T 2xzm_R 22 DWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISSSWDKTLR 101 (343)
T ss_dssp SCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEEETTSEEE
T ss_pred hhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEEcCCCcEE
Confidence 34556655 44 6778999999999999874 5799999999999 89999999999999
Q ss_pred EEeCCCCeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCccccccccCCCceeeeEEEEeeCC---
Q 008820 276 VWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSG--- 352 (552)
Q Consensus 276 iwd~~~~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 352 (552)
+||+.+++.+..+.+|...|.+++|+|++. ++++++.|++|++||+.... .........+. ......+++|++
T Consensus 102 lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~-~l~s~~~d~~i~~wd~~~~~-~~~~~~~~~~~--~~v~~~~~~~~~~~~ 177 (343)
T 2xzm_R 102 LWDLRTGTTYKRFVGHQSEVYSVAFSPDNR-QILSAGAEREIKLWNILGEC-KFSSAEKENHS--DWVSCVRYSPIMKSA 177 (343)
T ss_dssp EEETTSSCEEEEEECCCSCEEEEEECSSTT-EEEEEETTSCEEEEESSSCE-EEECCTTTSCS--SCEEEEEECCCCCSC
T ss_pred EEECCCCcEEEEEcCCCCcEEEEEECCCCC-EEEEEcCCCEEEEEeccCCc-eeeeecccCCC--ceeeeeeeccccccc
Confidence 999999999999999999999999999765 77999999999999987321 11111111121 122334566655
Q ss_pred -------CEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe--CCEEEEEeCCCcEEEEECCC-CceeEEEecCC
Q 008820 353 -------RYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC--NGVLYSGSRDGTIRLWSLSD-HSLLTVLEEDS 422 (552)
Q Consensus 353 -------~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~ 422 (552)
.++++++.||.|++|| .+.+....+.+|...|++++|+ +.+|++|+.|++|++||+++ ......+...
T Consensus 178 ~~~~~~~~~l~s~~~d~~i~iwd-~~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~- 255 (343)
T 2xzm_R 178 NKVQPFAPYFASVGWDGRLKVWN-TNFQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDILNLTYPQREFDAG- 255 (343)
T ss_dssp SCCCSSCCEEEEEETTSEEEEEE-TTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEESSCCSSCSEEEECS-
T ss_pred cccCCCCCEEEEEcCCCEEEEEc-CCCceeEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEECCCCcccceeecCC-
Confidence 6899999999999999 4667788899999999999999 34999999999999999954 4445555432
Q ss_pred CCceEEEEEEcCCCCEEEEEECCCcEEEEeCCc--cee--eee-----------cccceEEEEEe--cCCEEEEEeCCCe
Q 008820 423 SGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDK--FMK--SMQ-----------THKGSVFAVFL--EGKWLFTGGWDKT 485 (552)
Q Consensus 423 ~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~~--~~~--~~~-----------~h~~~v~~v~~--~~~~l~sgs~dg~ 485 (552)
..+.. ++|+|++.+++++ .|+.|++||+.. ... .+. +|...|.+++| ++++|++|+.||.
T Consensus 256 -~~v~~-v~~sp~~~~la~~-~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~sg~~Dg~ 332 (343)
T 2xzm_R 256 -STINQ-IAFNPKLQWVAVG-TDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNALGKKLFAGFTDGV 332 (343)
T ss_dssp -SCEEE-EEECSSSCEEEEE-ESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSSSCCEEEEETTSE
T ss_pred -CcEEE-EEECCCCCEEEEE-CCCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEECCCCCeEEEecCCce
Confidence 23444 7999999887755 577899999643 211 332 68888999887 8999999999999
Q ss_pred EEEEecCCC
Q 008820 486 VSVQELAGD 494 (552)
Q Consensus 486 i~iwd~~~~ 494 (552)
|++|+++++
T Consensus 333 v~~w~~~~g 341 (343)
T 2xzm_R 333 IRTFSFETS 341 (343)
T ss_dssp EEEEEEEEE
T ss_pred EEEEEEEcc
Confidence 999998754
No 49
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=3.4e-32 Score=270.49 Aligned_cols=283 Identities=13% Similarity=0.103 Sum_probs=224.4
Q ss_pred eecCccceEEEEEc--CCEEEEEeCCCcEEEEeCCCCe--EEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCC
Q 008820 248 LQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFS--HVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFS 323 (552)
Q Consensus 248 l~~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~~--~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~ 323 (552)
+..|.++|++++|+ +++|++|+.|+.|++||+.+++ .+..+.+|...|.+++|+|++ .++++++.||.|++||+.
T Consensus 4 ~~~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~~~~~dg~i~vwd~~ 82 (372)
T 1k8k_C 4 HSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDS-NRIVTCGTDRNAYVWTLK 82 (372)
T ss_dssp EESCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTT-TEEEEEETTSCEEEEEEE
T ss_pred ecccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCC-CEEEEEcCCCeEEEEECC
Confidence 45699999999999 8999999999999999999987 889999999999999999965 478999999999999997
Q ss_pred CCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCce---e-EEecCCCCCeEEEEEe--CCEEEE
Q 008820 324 FPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTL---S-CTMSGHKSAVSTLAVC--NGVLYS 397 (552)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~---~-~~~~~h~~~v~~l~~~--~~~l~s 397 (552)
+........ ...+. ......++++++++|++|+.||.|++||++.++. . ....+|...|.+++|+ +.++++
T Consensus 83 ~~~~~~~~~-~~~~~--~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~ 159 (372)
T 1k8k_C 83 GRTWKPTLV-ILRIN--RAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAA 159 (372)
T ss_dssp TTEEEEEEE-CCCCS--SCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEE
T ss_pred CCeeeeeEE-eecCC--CceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEE
Confidence 654222211 11111 1223457888999999999999999999988763 2 3336789999999999 349999
Q ss_pred EeCCCcEEEEECC------------------CCceeEEEecCCCCceEEEEEEcCCCCEEEEEECCCcEEEEeCC--cce
Q 008820 398 GSRDGTIRLWSLS------------------DHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRND--KFM 457 (552)
Q Consensus 398 ~~~dg~i~iwd~~------------------~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~--~~~ 457 (552)
++.||.|++||++ .++.+..+..+ ...+.. ++|+|++++|++++.||.|++||.+ +.+
T Consensus 160 ~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~-~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~ 237 (372)
T 1k8k_C 160 GSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSS-CGWVHG-VCFSANGSRVAWVSHDSTVCLADADKKMAV 237 (372)
T ss_dssp EETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCC-SSCEEE-EEECSSSSEEEEEETTTEEEEEEGGGTTEE
T ss_pred EcCCCCEEEEEcccccccccccccccccccchhhheEecCCC-CCeEEE-EEECCCCCEEEEEeCCCEEEEEECCCCcee
Confidence 9999999999954 56777777654 344555 6999999999999999999999964 577
Q ss_pred eeeecccceEEEEEe--cCCEEEEEeCCCeEEEEecCC--Ceeeee----------------------------ec----
Q 008820 458 KSMQTHKGSVFAVFL--EGKWLFTGGWDKTVSVQELAG--DEFEED----------------------------VI---- 501 (552)
Q Consensus 458 ~~~~~h~~~v~~v~~--~~~~l~sgs~dg~i~iwd~~~--~~~~~~----------------------------~~---- 501 (552)
..+..|...|.++.| ++.+|++| .|+.|++||+.+ +..... ..
T Consensus 238 ~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (372)
T 1k8k_C 238 ATLASETLPLLAVTFITESSLVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAA 316 (372)
T ss_dssp EEEECSSCCEEEEEEEETTEEEEEE-TTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC-------
T ss_pred EEEccCCCCeEEEEEecCCCEEEEE-eCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhcccccccccCcc
Confidence 888899999998887 77777777 899999999987 421110 00
Q ss_pred --cCCCcccCcceEEEEEe-C-----CeEEEEeCCCeEEEEEec
Q 008820 502 --PTGAIPCGSVITALLYW-Q-----GKLFVGCADRTVKIALCN 537 (552)
Q Consensus 502 --~~~~~~~~~~v~~l~~~-~-----~~l~s~s~Dg~v~iw~~~ 537 (552)
......+...|++++|. + ..|++|+.||.|++|+++
T Consensus 317 ~~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~~ 360 (372)
T 1k8k_C 317 AGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVR 360 (372)
T ss_dssp --CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHH
T ss_pred ccccccccccCCcceeEEecCCCcceeeEEEecCCCceEEEEec
Confidence 00111357789999866 3 469999999999999997
No 50
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=1.4e-32 Score=279.69 Aligned_cols=257 Identities=24% Similarity=0.438 Sum_probs=219.3
Q ss_pred CcceEEEeeCCCeEEEEE---------eecCccceEEEEEcCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEE
Q 008820 230 GVKDLVNGLSKGNVKFKD---------LQGHRDCVTGLAVGGGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVY 300 (552)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~---------l~~H~~~V~~l~~s~~~l~s~s~dg~I~iwd~~~~~~~~~~~~h~~~v~~v~~ 300 (552)
+++.++++..++.+.+|+ +.+|.+.|++++|++++|++|+.||+|++||+.+++.+..+.+|...|.+++|
T Consensus 142 d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~ 221 (435)
T 1p22_A 142 DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRF 221 (435)
T ss_dssp CSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEECCSSEEEEEETTSCEEEEESSSCCEEEEECCCCSCEEEEEC
T ss_pred CCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEECCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCcEEEEEE
Confidence 677888999999988887 56899999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCEEEEEcCCCcEEEEeCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCceeEEecC
Q 008820 301 VDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSG 380 (552)
Q Consensus 301 ~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~ 380 (552)
++ ..+++|+.||.|++||+.++...........+. ..+.++.++++++++|+.||.|++||+++++.+..+.+
T Consensus 222 ~~---~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~----~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~ 294 (435)
T 1p22_A 222 NN---GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHR----AAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNG 294 (435)
T ss_dssp CT---TEEEEEETTSCEEEEECSSSSCCEEEEEECCCS----SCEEEEEEETTEEEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred cC---CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCC----CcEEEEEeCCCEEEEEeCCCeEEEEECCcCcEEEEEcC
Confidence 64 388999999999999998765543333333332 24567777999999999999999999999999999999
Q ss_pred CCCCeEEEEEeCCEEEEEeCCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEECCCcEEEEeCCc-----
Q 008820 381 HKSAVSTLAVCNGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDK----- 455 (552)
Q Consensus 381 h~~~v~~l~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~~----- 455 (552)
|...|.++.++++++++|+.||.|++||+++++.+..+..+. ..+.+ +++ ++.++++|+.||.|++||...
T Consensus 295 ~~~~v~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~-~~v~~-~~~--~~~~l~sg~~dg~i~vwd~~~~~~~~ 370 (435)
T 1p22_A 295 HKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHE-ELVRC-IRF--DNKRIVSGAYDGKIKVWDLVAALDPR 370 (435)
T ss_dssp CSSCEEEEEEETTEEEEEETTSCEEEEETTTCCEEEEECCCS-SCEEE-EEC--CSSEEEEEETTSCEEEEEHHHHTSTT
T ss_pred CCCcEEEEEeCCCEEEEEeCCCeEEEEECCCCCEEEEEeCCc-CcEEE-EEe--cCCEEEEEeCCCcEEEEECCCCCCcc
Confidence 999999999998899999999999999999999999988763 44443 344 889999999999999999532
Q ss_pred ------ceeeeecccceEEEEEecCCEEEEEeCCCeEEEEecCCCeee
Q 008820 456 ------FMKSMQTHKGSVFAVFLEGKWLFTGGWDKTVSVQELAGDEFE 497 (552)
Q Consensus 456 ------~~~~~~~h~~~v~~v~~~~~~l~sgs~dg~i~iwd~~~~~~~ 497 (552)
....+.+|...|.++.+++.+|++|+.||.|++||+.+....
T Consensus 371 ~~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~s~Dg~i~iwd~~~~~~~ 418 (435)
T 1p22_A 371 APAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDDTILIWDFLNDPAA 418 (435)
T ss_dssp SCTTTTEEEEECCCSSCCCCEEECSSCEEECCSSSEEEEEC-------
T ss_pred ccccchheeeccCCCCCeEEEEeCCCEEEEEeCCCEEEEEECCCCCCc
Confidence 567888999999999999999999999999999999876543
No 51
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=5.8e-32 Score=310.93 Aligned_cols=321 Identities=15% Similarity=0.214 Sum_probs=260.7
Q ss_pred CCCccccceeeecCcceEEEeeCCCeEEEEE---------eecCccceEEEEEc--CCEEEEEeCCCcEEEEeCCCCeEE
Q 008820 217 SDGADIDQARAAGGVKDLVNGLSKGNVKFKD---------LQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHV 285 (552)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------l~~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~~~~ 285 (552)
.+...+..+.++++++.++++..++.+.+|+ +.+|.+.|++++|+ ++++++|+.||+|++||+.+++.+
T Consensus 613 ~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~ 692 (1249)
T 3sfz_A 613 PHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLV 692 (1249)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEE
T ss_pred cccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCceE
Confidence 3456688899999999999999999999987 56899999999999 899999999999999999999999
Q ss_pred EEEeCCCCCeEEEEEecC-CCCEEEEEcCCCcEEEEeCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcE
Q 008820 286 HTFKGHDHKVMAVVYVDE-DQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTI 364 (552)
Q Consensus 286 ~~~~~h~~~v~~v~~~~~-~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i 364 (552)
..+.+|...|.+++|+|+ +..++++|+.|+.|++||+.++..... ...+.. .....+++++++.+++|+.||.|
T Consensus 693 ~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~---~~~h~~--~v~~~~~sp~~~~l~s~s~dg~v 767 (1249)
T 3sfz_A 693 HTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNT---MFGHTN--SVNHCRFSPDDELLASCSADGTL 767 (1249)
T ss_dssp EEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEE---ECCCSS--CEEEEEECSSTTEEEEEESSSEE
T ss_pred EEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhhe---ecCCCC--CEEEEEEecCCCEEEEEECCCeE
Confidence 999999999999999986 445889999999999999987654333 223322 22345788999999999999999
Q ss_pred EEEECCCCceeEEe-------------------------------------------------------cCCCCCeEEEE
Q 008820 365 KAWSLLDGTLSCTM-------------------------------------------------------SGHKSAVSTLA 389 (552)
Q Consensus 365 ~iwd~~~~~~~~~~-------------------------------------------------------~~h~~~v~~l~ 389 (552)
++||+.+++....+ .+|...|.+++
T Consensus 768 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~ 847 (1249)
T 3sfz_A 768 RLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCD 847 (1249)
T ss_dssp EEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEE
T ss_pred EEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEE
Confidence 99998776543332 26788899999
Q ss_pred Ee--CCEEEEEeCCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEECCCcEEEEeCC-------------
Q 008820 390 VC--NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRND------------- 454 (552)
Q Consensus 390 ~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~------------- 454 (552)
|+ +..+++++.||.|++||+.++..+..+..+ ...+.+ ++|+|+++++++++.||.|++||..
T Consensus 848 ~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h-~~~v~~-v~~spdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~ 925 (1249)
T 3sfz_A 848 FSPYDHLAVIALSQYCVELWNIDSRLKVADCRGH-LSWVHG-VMFSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQE 925 (1249)
T ss_dssp ECSSTTEEEEECSSSCEEEEETTTTEEEEEECCC-SSCEEE-EEECTTSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEE
T ss_pred EcCCCCEEEEEeCCCeEEEEEcCCCceeeecCCC-ccceEE-EEECCCCCEEEEEeCCCeEEEEEccccceeeeecccce
Confidence 99 449999999999999999999988888765 344444 6888888888888888888888732
Q ss_pred --------------------------------------------------------------------cceeeeecccce
Q 008820 455 --------------------------------------------------------------------KFMKSMQTHKGS 466 (552)
Q Consensus 455 --------------------------------------------------------------------~~~~~~~~h~~~ 466 (552)
+....+.+|...
T Consensus 926 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h~~~ 1005 (1249)
T 3sfz_A 926 IDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVGHKKA 1005 (1249)
T ss_dssp EEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEEEETTSCCEEEETTTTSCEEECCCCSSC
T ss_pred eeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCceeeecccCCCc
Confidence 122334567778
Q ss_pred EEEEEe--cCCEEEEEeCCCeEEEEecCCCeeeeeeccCCCcccCcceEEEEEeC-CeEEEEeCCCeEEEEEecCCccee
Q 008820 467 VFAVFL--EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQ-GKLFVGCADRTVKIALCNRQIPEI 543 (552)
Q Consensus 467 v~~v~~--~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~~-~~l~s~s~Dg~v~iw~~~~~~~~~ 543 (552)
|.++.| ++++|++++.||.|++||+.+++..... .+...|.++++++ +.+++++.||.|++||+. +....
T Consensus 1006 v~~l~~s~dg~~l~s~~~dg~i~vwd~~~~~~~~~~------~~~~~v~~~~~~~~~~l~~~~~dg~v~vwd~~-~~~~~ 1078 (1249)
T 3sfz_A 1006 VRHIQFTADGKTLISSSEDSVIQVWNWQTGDYVFLQ------AHQETVKDFRLLQDSRLLSWSFDGTVKVWNVI-TGRIE 1078 (1249)
T ss_dssp CCCEEECSSSSCEEEECSSSBEEEEETTTTEEECCB------CCSSCEEEEEECSSSEEEEEESSSEEEEEETT-TTCCC
T ss_pred eEEEEECCCCCEEEEEcCCCEEEEEECCCCceEEEe------cCCCcEEEEEEcCCCcEEEEECCCcEEEEECC-CCcee
Confidence 877776 8889999999999999999887665432 2366799999995 669999999999999997 55667
Q ss_pred EEEecccc
Q 008820 544 FSLLLHIN 551 (552)
Q Consensus 544 ~~~~gh~~ 551 (552)
..+.+|.+
T Consensus 1079 ~~~~~~~~ 1086 (1249)
T 3sfz_A 1079 RDFTCHQG 1086 (1249)
T ss_dssp EEEECCSS
T ss_pred EEEcccCC
Confidence 77777753
No 52
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.2e-33 Score=282.00 Aligned_cols=282 Identities=13% Similarity=0.111 Sum_probs=210.1
Q ss_pred eecCccceEEEEEc--CCEEEEEeCCCcEEEEeCCCC--eEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCC
Q 008820 248 LQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDF--SHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFS 323 (552)
Q Consensus 248 l~~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~--~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~ 323 (552)
+..|.++|++++|+ +++|++|+.|+.|++||+.++ +.+..+.+|...|.+++|+|++. +|++++.|++|++||+.
T Consensus 7 ~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~-~l~s~s~d~~v~vwd~~ 85 (377)
T 3dwl_C 7 LHILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSN-RIVTCSQDRNAYVYEKR 85 (377)
T ss_dssp EEECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTC-CEEEEETTSSEEEC---
T ss_pred EecCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCC-EEEEEeCCCeEEEEEcC
Confidence 34577899999999 899999999999999999988 77888999999999999999765 77999999999999998
Q ss_pred CCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCc---eeEEecC-CCCCeEEEEEe--CCEEEE
Q 008820 324 FPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGT---LSCTMSG-HKSAVSTLAVC--NGVLYS 397 (552)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~---~~~~~~~-h~~~v~~l~~~--~~~l~s 397 (552)
++...........+.. .....++++++++|++|+.|+.|++||+++++ ....+.+ |...|++++|+ +.+|++
T Consensus 86 ~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~ 163 (377)
T 3dwl_C 86 PDGTWKQTLVLLRLNR--AATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAA 163 (377)
T ss_dssp ---CCCCEEECCCCSS--CEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEE
T ss_pred CCCceeeeeEecccCC--ceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEE
Confidence 7652223333333332 22345678889999999999999999999887 4777877 99999999999 349999
Q ss_pred EeCCCcEEEEECCC------------------CceeEEEecCCCCceEEEEEEcCCCCEEEEEECCCcEEEEeCCc--c-
Q 008820 398 GSRDGTIRLWSLSD------------------HSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDK--F- 456 (552)
Q Consensus 398 ~~~dg~i~iwd~~~------------------~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~~--~- 456 (552)
++.|++|++||++. ++++..+ .+...+.+ ++|+|++++|++++.||.|++||... .
T Consensus 164 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~-~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~ 240 (377)
T 3dwl_C 164 GCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY--PSGGWVHA-VGFSPSGNALAYAGHDSSVTIAYPSAPEQP 240 (377)
T ss_dssp EESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC--CCSSSEEE-EEECTTSSCEEEEETTTEEC-CEECSTTSC
T ss_pred EeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc--cCCceEEE-EEECCCCCEEEEEeCCCcEEEEECCCCCCc
Confidence 99999999999953 3344444 34455555 69999999999999999999999653 3
Q ss_pred ---eeeeecccceEEEEEe--cCCEEEEEeCCCeEEEEecCCCeee--eeec----------------------------
Q 008820 457 ---MKSMQTHKGSVFAVFL--EGKWLFTGGWDKTVSVQELAGDEFE--EDVI---------------------------- 501 (552)
Q Consensus 457 ---~~~~~~h~~~v~~v~~--~~~~l~sgs~dg~i~iwd~~~~~~~--~~~~---------------------------- 501 (552)
+..+.+|...|.++.| ++++|++|+.|+.+ +|+....... ....
T Consensus 241 ~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (377)
T 3dwl_C 241 PRALITVKLSQLPLRSLLWANESAIVAAGYNYSPI-LLQGNESGWAHTRDLDAGTSKTSFTHTGNTGEGREEEGPVSFTA 319 (377)
T ss_dssp EEECCCEECSSSCEEEEEEEETTEEEEEESSSSEE-EECCCC---CCSBCCCSCCCCCCBSSSSSBCCCCCC--------
T ss_pred ceeeEeecCCCCceEEEEEcCCCCEEEEEcCCcEE-EEEeCCCceEEEeeeccccccccccccccccccccccccccccc
Confidence 6788899999999887 88999988866665 6666522100 0000
Q ss_pred -----------------cCCCcccCcceEEEEEeC---C---eEEEEeCCCeEEEEEe
Q 008820 502 -----------------PTGAIPCGSVITALLYWQ---G---KLFVGCADRTVKIALC 536 (552)
Q Consensus 502 -----------------~~~~~~~~~~v~~l~~~~---~---~l~s~s~Dg~v~iw~~ 536 (552)
......|...|+++.+.+ + .++||+.||.|++||+
T Consensus 320 ~~~~~~~~~~~g~~~~~~~~~~~H~~~i~~~~~~~~~~~~~~~~~s~g~Dg~i~iWdl 377 (377)
T 3dwl_C 320 LRSTFRNMDLKGSSQSISSLPTVHQNMIATLRPYAGTPGNITAFTSSGTDGRVVLWTL 377 (377)
T ss_dssp -----------------CCCSSSCSSCEEEEEEEEEETTEEEEEEEEETTSEEEEECC
T ss_pred ccccccchhhccccccccccCccccceeEEEeccCCCCCceEEEEeecCCCcEEEecC
Confidence 000012567899998763 2 4999999999999985
No 53
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=7.8e-32 Score=266.22 Aligned_cols=292 Identities=18% Similarity=0.236 Sum_probs=220.7
Q ss_pred CeEEEEEeecCccceEEEEEc--C-CEEEEEeC---CCcEEEEeCCCCeEEEEE-eCCCCCeEEEEEecCC--CCEEEEE
Q 008820 241 GNVKFKDLQGHRDCVTGLAVG--G-GFLFSSSF---DKSIHVWSLKDFSHVHTF-KGHDHKVMAVVYVDED--QPLCISG 311 (552)
Q Consensus 241 ~~~~~~~l~~H~~~V~~l~~s--~-~~l~s~s~---dg~I~iwd~~~~~~~~~~-~~h~~~v~~v~~~~~~--~~~l~s~ 311 (552)
..+....+.+|.+.|++++|+ + .++++|+. |++|++||+.+++..... .+|...|.+++|+|++ +.+++++
T Consensus 7 ~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~ 86 (357)
T 3i2n_A 7 PQIIAHIQKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATG 86 (357)
T ss_dssp CCEEEEEEEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEE
T ss_pred hHHhhhhccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEe
Confidence 334455678999999999999 5 45566766 999999999998776543 3799999999999984 5688999
Q ss_pred cCCCcEEEEeCCCCCCCccccccccCCCceeeeEE-----EEeeCCCEEEEeeCCCcEEEEECCCCc-eeEEecCCCC--
Q 008820 312 DSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIH-----ALTTSGRYLYTGSGDRTIKAWSLLDGT-LSCTMSGHKS-- 383 (552)
Q Consensus 312 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~l~sgs~dg~i~iwd~~~~~-~~~~~~~h~~-- 383 (552)
+.||.|++||+.++. .....+..+.. ....+. +++++++.|++|+.||.|++||+++++ .+..+..|.+
T Consensus 87 ~~dg~i~iwd~~~~~--~~~~~~~~~~~-~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~ 163 (357)
T 3i2n_A 87 DFGGNLHIWNLEAPE--MPVYSVKGHKE-IINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGEN 163 (357)
T ss_dssp ETTSCEEEECTTSCS--SCSEEECCCSS-CEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSC
T ss_pred cCCCeEEEEeCCCCC--ccEEEEEeccc-ceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCC
Confidence 999999999998765 12233333332 222221 346788899999999999999999887 7778866655
Q ss_pred --CeEEEEE----e--CCEEEEEeCCCcEEEEECCCCceeEEEecCCCCceEEEEEEcC---CCCEEEEEECCCcEEEEe
Q 008820 384 --AVSTLAV----C--NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTA---VQHTLVVSHESGSIKVWR 452 (552)
Q Consensus 384 --~v~~l~~----~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~---~~~~l~~g~~dg~i~iwd 452 (552)
.+.+++| + +.++++++.|+.|++||+++++....... ...+.+ ++|+| +++++++++.||.|++||
T Consensus 164 ~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~--~~~v~~-~~~~~~~~~~~~l~~~~~dg~i~i~d 240 (357)
T 3i2n_A 164 KRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWETNI--KNGVCS-LEFDRKDISMNKLVATSLEGKFHVFD 240 (357)
T ss_dssp CCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEEEEC--SSCEEE-EEESCSSSSCCEEEEEESTTEEEEEE
T ss_pred CCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeeecCC--CCceEE-EEcCCCCCCCCEEEEECCCCeEEEEe
Confidence 8999984 4 45999999999999999999987655433 344555 69999 999999999999999999
Q ss_pred CCc--ceeee-----ecccceEEEEEe--cCC-EEEEEeCCCeEEEEecCCCeeeeeecc--------------CCCccc
Q 008820 453 NDK--FMKSM-----QTHKGSVFAVFL--EGK-WLFTGGWDKTVSVQELAGDEFEEDVIP--------------TGAIPC 508 (552)
Q Consensus 453 ~~~--~~~~~-----~~h~~~v~~v~~--~~~-~l~sgs~dg~i~iwd~~~~~~~~~~~~--------------~~~~~~ 508 (552)
.+. ....+ .+|...|.++.+ ++. +|++++.||.|++||++.......... .....+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 320 (357)
T 3i2n_A 241 MRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLS 320 (357)
T ss_dssp EEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECC
T ss_pred CcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccC
Confidence 653 33333 489999999987 566 899999999999999975432210000 001123
Q ss_pred CcceEEEEEeCC--eEE-EEeCCCeEEEEEecC
Q 008820 509 GSVITALLYWQG--KLF-VGCADRTVKIALCNR 538 (552)
Q Consensus 509 ~~~v~~l~~~~~--~l~-s~s~Dg~v~iw~~~~ 538 (552)
...|.+++|+++ .|+ +++.||.|++|++..
T Consensus 321 ~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~ 353 (357)
T 3i2n_A 321 TQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTK 353 (357)
T ss_dssp SSCEEEEEECSSSTTEEEEEETTSEEEEEEECC
T ss_pred CCCeeEEEEcCCCCeEEEEecCCCcEEEEECCC
Confidence 677999999964 376 899999999999973
No 54
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.2e-31 Score=271.17 Aligned_cols=279 Identities=13% Similarity=0.174 Sum_probs=225.1
Q ss_pred EEEeecCccceEEEEEc--CC-EEEEEeCCCcEEEEeC----CCCe------EEEEEeC----------CCCCeEEEEEe
Q 008820 245 FKDLQGHRDCVTGLAVG--GG-FLFSSSFDKSIHVWSL----KDFS------HVHTFKG----------HDHKVMAVVYV 301 (552)
Q Consensus 245 ~~~l~~H~~~V~~l~~s--~~-~l~s~s~dg~I~iwd~----~~~~------~~~~~~~----------h~~~v~~v~~~ 301 (552)
......|.++|++++|+ ++ +|++|+.||.|++||+ .+++ ....+.. |.+.|++++|+
T Consensus 38 ~~~~~~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s 117 (425)
T 1r5m_A 38 ILKEIVKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWS 117 (425)
T ss_dssp ECEEEEECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEEC
T ss_pred heeeeeccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEc
Confidence 33345677999999999 77 9999999999999999 8888 5666655 68899999999
Q ss_pred cCCCCEEEEEcCCCcEEEEeCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCceeEEecCC
Q 008820 302 DEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGH 381 (552)
Q Consensus 302 ~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h 381 (552)
|++ .+|++++.||.|++||.. + ..+..+..+.. .....++++++++|++++.||.|++||+.+++.+..+..+
T Consensus 118 ~~~-~~l~~~~~dg~i~i~~~~-~---~~~~~~~~~~~--~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~ 190 (425)
T 1r5m_A 118 HDG-NSIVTGVENGELRLWNKT-G---ALLNVLNFHRA--PIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELK 190 (425)
T ss_dssp TTS-SEEEEEETTSCEEEEETT-S---CEEEEECCCCS--CEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC
T ss_pred CCC-CEEEEEeCCCeEEEEeCC-C---CeeeeccCCCc--cEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeecc
Confidence 965 478999999999999932 2 22333333322 2234577888999999999999999999999999999888
Q ss_pred CCC---------------eEEEEEe-CCEEEEEeCCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEECC
Q 008820 382 KSA---------------VSTLAVC-NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHES 445 (552)
Q Consensus 382 ~~~---------------v~~l~~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~d 445 (552)
... +.++.|+ ++.+++++.||.|++||+++++.+..+..+ ...+.. ++++|++++|++++.|
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~-~~~i~~-~~~~~~~~~l~~~~~d 268 (425)
T 1r5m_A 191 ETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGH-HGPISV-LEFNDTNKLLLSASDD 268 (425)
T ss_dssp ---------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCC-SSCEEE-EEEETTTTEEEEEETT
T ss_pred ccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccC-CCceEE-EEECCCCCEEEEEcCC
Confidence 777 9999999 779999999999999999999988888765 344444 6999999999999999
Q ss_pred CcEEEEeCC--cceeeeecccceEEEEEe--cCCEEEEEeCCCeEEEEecCCCeeeeeeccCCCcccCcceEEEEEeC--
Q 008820 446 GSIKVWRND--KFMKSMQTHKGSVFAVFL--EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQ-- 519 (552)
Q Consensus 446 g~i~iwd~~--~~~~~~~~h~~~v~~v~~--~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~~-- 519 (552)
|.|++||.. +....+..|...|.++.+ ++ ++++++.|+.|++||+.+++.......+ ...|.+++|++
T Consensus 269 ~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~-----~~~i~~~~~s~~~ 342 (425)
T 1r5m_A 269 GTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSIVD-----GVPIFAGRISQDG 342 (425)
T ss_dssp SCEEEECSSSBSCSEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEEECT-----TCCEEEEEECTTS
T ss_pred CEEEEEECCCCccceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEecccC-----CccEEEEEEcCCC
Confidence 999999965 467788889999999988 56 9999999999999999988776655432 56799999995
Q ss_pred CeEEEEeCCCeEEEEEecC
Q 008820 520 GKLFVGCADRTVKIALCNR 538 (552)
Q Consensus 520 ~~l~s~s~Dg~v~iw~~~~ 538 (552)
..|++++.||.|++|+++.
T Consensus 343 ~~l~~~~~dg~i~i~~~~~ 361 (425)
T 1r5m_A 343 QKYAVAFMDGQVNVYDLKK 361 (425)
T ss_dssp SEEEEEETTSCEEEEECHH
T ss_pred CEEEEEECCCeEEEEECCC
Confidence 3599999999999999983
No 55
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=5.5e-32 Score=260.57 Aligned_cols=243 Identities=14% Similarity=0.228 Sum_probs=195.4
Q ss_pred EEeecCccceEEEEEc--CCEEEEEeCCCcEEEEeCCC--CeEEEEEeCCCCCeEEEEEecC-CCCEEEEEcCCCcEEEE
Q 008820 246 KDLQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKD--FSHVHTFKGHDHKVMAVVYVDE-DQPLCISGDSGGGIFVW 320 (552)
Q Consensus 246 ~~l~~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~--~~~~~~~~~h~~~v~~v~~~~~-~~~~l~s~~~dg~i~vw 320 (552)
..+.+|.+.|++++|+ +++|++|+.|++|+|||+.+ .+.+.++.+|.++|.+++|+++ .+.+|++|+.|++|++|
T Consensus 3 ~~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iW 82 (297)
T 2pm7_B 3 VIANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIW 82 (297)
T ss_dssp EECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEE
T ss_pred eeccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEE
Confidence 4578999999999999 99999999999999999974 4678899999999999999864 36789999999999999
Q ss_pred eCCCCCCCccccccccCCCceeeeEEEEeeC--CCEEEEeeCCCcEEEEECCCCc--eeEEecCCCCCeEEEEEeC----
Q 008820 321 SFSFPLGHEPLKKWNEEKDWRYSGIHALTTS--GRYLYTGSGDRTIKAWSLLDGT--LSCTMSGHKSAVSTLAVCN---- 392 (552)
Q Consensus 321 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~sgs~dg~i~iwd~~~~~--~~~~~~~h~~~v~~l~~~~---- 392 (552)
|++++... .+..+..+.. .....+++|+ +.+|++|+.|+.|++||++++. ....+.+|...|.+++|++
T Consensus 83 d~~~~~~~-~~~~~~~h~~--~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~ 159 (297)
T 2pm7_B 83 KEENGRWS-QIAVHAVHSA--SVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIE 159 (297)
T ss_dssp EBSSSCBC-CCEEECCCSS--CEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC--
T ss_pred EcCCCceE-EEEEeecCCC--ceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCccc
Confidence 99865321 1222222222 1233467776 7899999999999999998763 2456788999999999984
Q ss_pred -----------CEEEEEeCCCcEEEEECCCCc----eeEEEecCCCCceEEEEEEcCCC---CEEEEEECCCcEEEEeCC
Q 008820 393 -----------GVLYSGSRDGTIRLWSLSDHS----LLTVLEEDSSGAVSSVLSLTAVQ---HTLVVSHESGSIKVWRND 454 (552)
Q Consensus 393 -----------~~l~s~~~dg~i~iwd~~~~~----~~~~~~~~~~~~~~~~~~~s~~~---~~l~~g~~dg~i~iwd~~ 454 (552)
.+|++|+.|++|++||+++++ ....+..| ...+.+ ++|+|++ .+|++++.|++|++||..
T Consensus 160 ~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H-~~~V~~-v~~sp~~~~~~~las~s~D~~v~iWd~~ 237 (297)
T 2pm7_B 160 EDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGH-SDWVRD-VAWSPTVLLRSYMASVSQDRTCIIWTQD 237 (297)
T ss_dssp ----------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCC-SSCEEE-EEECCCCSSSEEEEEEETTSCEEEEEES
T ss_pred ccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCC-CCceEE-EEECCCCCCceEEEEEECCCcEEEEEeC
Confidence 389999999999999998876 44556554 455555 6999984 899999999999999965
Q ss_pred cc-----eeee--ecccceEEEEEe--cCCEEEEEeCCCeEEEEecCC
Q 008820 455 KF-----MKSM--QTHKGSVFAVFL--EGKWLFTGGWDKTVSVQELAG 493 (552)
Q Consensus 455 ~~-----~~~~--~~h~~~v~~v~~--~~~~l~sgs~dg~i~iwd~~~ 493 (552)
.. ...+ ..|...|.+++| ++++|++++.||.|++|+...
T Consensus 238 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~~ 285 (297)
T 2pm7_B 238 NEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 285 (297)
T ss_dssp STTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEECT
T ss_pred CCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEECC
Confidence 42 1233 467889998887 899999999999999999863
No 56
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=6.4e-33 Score=282.23 Aligned_cols=282 Identities=13% Similarity=0.102 Sum_probs=207.7
Q ss_pred EeecCccceEEEEEc---CCEEEEEeCCCcEEEEeCCCCeE--EEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEe
Q 008820 247 DLQGHRDCVTGLAVG---GGFLFSSSFDKSIHVWSLKDFSH--VHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWS 321 (552)
Q Consensus 247 ~l~~H~~~V~~l~~s---~~~l~s~s~dg~I~iwd~~~~~~--~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd 321 (552)
...+|...|+|++|+ +++||+|+.||+|+|||+.+++. ...+.+|.+.|++++|+|.+..+|++|+.||+|++||
T Consensus 114 ~~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd 193 (435)
T 4e54_B 114 KAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQD 193 (435)
T ss_dssp EEEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEE
T ss_pred cCCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEee
Confidence 456899999999998 67999999999999999987654 4445689999999999997778999999999999999
Q ss_pred CCCCCCCccccccccC-CCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe-C--CEEEE
Q 008820 322 FSFPLGHEPLKKWNEE-KDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC-N--GVLYS 397 (552)
Q Consensus 322 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~-~--~~l~s 397 (552)
++.... ...... .........++++++++|++|+.||.|++||++ ++.+..+.+|...|++++|+ + .++++
T Consensus 194 ~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~-~~~~~~~~~h~~~v~~v~~~p~~~~~~~s 268 (435)
T 4e54_B 194 FKGNIL----RVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMD-GKELWNLRMHKKKVTHVALNPCCDWFLAT 268 (435)
T ss_dssp TTSCEE----EEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESS-SCBCCCSBCCSSCEEEEEECTTCSSEEEE
T ss_pred ccCCce----eEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccC-cceeEEEecccceEEeeeecCCCceEEEE
Confidence 975321 111111 111122345788999999999999999999985 56677889999999999998 2 38899
Q ss_pred EeCCCcEEEEECCCCceeEEEe--cCCCCceEEEEEEcCCCCEEEEEECCCcEEEEeCCc--ceeeeecccce------E
Q 008820 398 GSRDGTIRLWSLSDHSLLTVLE--EDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDK--FMKSMQTHKGS------V 467 (552)
Q Consensus 398 ~~~dg~i~iwd~~~~~~~~~~~--~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~~--~~~~~~~h~~~------v 467 (552)
|+.|++|++||+++.+....+. ..+...+.+ ++|+|++++|++++.||.|++||... ....+..|... +
T Consensus 269 ~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~-~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 347 (435)
T 4e54_B 269 ASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNA-ACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLIPHPHRHFQHLTP 347 (435)
T ss_dssp EETTSBCCEEETTTCCSSSCCSBCCBCSSCEEE-CCBCTTSSEEEEEESSSCEEEEESSSSSSEEEECCCCCCCCSSSCC
T ss_pred ecCcceeeEEecccccccceEEEeeeccccccc-eeECCCCCeeEEEcCCCEEEEEECCCCccceEEeccccccccccee
Confidence 9999999999999876544332 223445555 68999999999999999999999653 34444444321 1
Q ss_pred EE--EEecCCEEEEEe------------CCCeEEEEecCCCeeeeeeccCCCcccCcceEEE-EEeC-CeEEEEeCCCeE
Q 008820 468 FA--VFLEGKWLFTGG------------WDKTVSVQELAGDEFEEDVIPTGAIPCGSVITAL-LYWQ-GKLFVGCADRTV 531 (552)
Q Consensus 468 ~~--v~~~~~~l~sgs------------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l-~~~~-~~l~s~s~Dg~v 531 (552)
.. ..+++..+++++ .++.|++||..+++....+... +...|.++ +|+| +.+++++.|+.|
T Consensus 348 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~----~~~~v~s~~~fspdg~~lasg~d~~i 423 (435)
T 4e54_B 348 IKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDP----ESSGISSLNEFNPMGDTLASAMGYHI 423 (435)
T ss_dssp CBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCS----SCCCCCCEEEECTTSSCEEEECSSEE
T ss_pred EEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCC----CCCcEEEEEEECCCCCEEEEEcCCcE
Confidence 11 122445555443 3467999999988776654332 24456665 6885 344444558999
Q ss_pred EEEEecC
Q 008820 532 KIALCNR 538 (552)
Q Consensus 532 ~iw~~~~ 538 (552)
+||+++.
T Consensus 424 ~iW~~~~ 430 (435)
T 4e54_B 424 LIWSQQE 430 (435)
T ss_dssp EECCCC-
T ss_pred EEEECCc
Confidence 9999974
No 57
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1e-31 Score=295.76 Aligned_cols=326 Identities=13% Similarity=0.123 Sum_probs=238.9
Q ss_pred cccceeeecCcceEEEeeCCCeEEEEEe--------------------ecCccceEEEEEc---CCEEEEEeCCCcEEEE
Q 008820 221 DIDQARAAGGVKDLVNGLSKGNVKFKDL--------------------QGHRDCVTGLAVG---GGFLFSSSFDKSIHVW 277 (552)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l--------------------~~H~~~V~~l~~s---~~~l~s~s~dg~I~iw 277 (552)
.+..+.+++.++.++++..++.+++|++ .+|.++|++++|+ +..+++|+.||+| +|
T Consensus 100 ~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lW 178 (902)
T 2oaj_A 100 KITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TY 178 (902)
T ss_dssp CEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EE
T ss_pred CEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EE
Confidence 4788889999999999999999999974 4588999999999 3689999999999 99
Q ss_pred eCCCCeEEEEEeCC------------------CCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCcc--cc-----
Q 008820 278 SLKDFSHVHTFKGH------------------DHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEP--LK----- 332 (552)
Q Consensus 278 d~~~~~~~~~~~~h------------------~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~--~~----- 332 (552)
|+.+++++..+..| ...|.+++|+|++ .+|++|+.||+|++||+++++.... +.
T Consensus 179 d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg-~~lasgs~Dg~i~lWd~~~g~~~~~r~l~~~~~~ 257 (902)
T 2oaj_A 179 SLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNS-LHIITIHEDNSLVFWDANSGHMIMARTVFETEIN 257 (902)
T ss_dssp ETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTS-SEEEEEETTCCEEEEETTTCCEEEEECSSCSCTT
T ss_pred ECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCC-CEEEEEECCCeEEEEECCCCcEEEEEeecccccC
Confidence 99999999998766 4779999999975 4889999999999999986543210 00
Q ss_pred --------------------cccc--CCC-ce--ee----------eE--------------------------------
Q 008820 333 --------------------KWNE--EKD-WR--YS----------GI-------------------------------- 345 (552)
Q Consensus 333 --------------------~~~~--~~~-~~--~~----------~~-------------------------------- 345 (552)
.+.. ... .. .. .+
T Consensus 258 ~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 337 (902)
T 2oaj_A 258 VPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMIDLGYTPRYSITSYEGMKNYYANPKQMKIF 337 (902)
T ss_dssp SCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEEEEECCCGGGCCHHHHHHHHHSCSEEEEE
T ss_pred CCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEecCCCCCccccchhhhhhhhcCccceEEE
Confidence 0000 000 00 00 00
Q ss_pred --------EEEe------------eCCCEEEEeeCCCcEEEEECCCCceeEE-------ecCCCCCeEEEEE--------
Q 008820 346 --------HALT------------TSGRYLYTGSGDRTIKAWSLLDGTLSCT-------MSGHKSAVSTLAV-------- 390 (552)
Q Consensus 346 --------~~~~------------~~~~~l~sgs~dg~i~iwd~~~~~~~~~-------~~~h~~~v~~l~~-------- 390 (552)
..+. .++..+++++.||.|++||+.++..... +..|...|+++++
T Consensus 338 ~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~g~~~~~~~~~~~~l~~~~~~v~~~~~s~~~~~~w 417 (902)
T 2oaj_A 338 PLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETMLYPSGIFTDKASLFPQNLSWLRPLATTSMAASVPNKLW 417 (902)
T ss_dssp CCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEETTTCCEECCGGGSCGGGTTBTTBEEEEEEEEEEHHHH
T ss_pred ecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEEEECCCCCcccccccCCCcccccCCCeeEEEEEEcCHHHH
Confidence 0000 1223677777888999999877643322 2334455555544
Q ss_pred --------------------------e--CCEEEEEeCCCcEEEEECCCCcee----EEEec------CCCCceEEEEEE
Q 008820 391 --------------------------C--NGVLYSGSRDGTIRLWSLSDHSLL----TVLEE------DSSGAVSSVLSL 432 (552)
Q Consensus 391 --------------------------~--~~~l~s~~~dg~i~iwd~~~~~~~----~~~~~------~~~~~~~~~~~~ 432 (552)
+ +++|++|+.|++|++||+.++... ..... .+...+.+ ++|
T Consensus 418 ~~~~~~~~~~~~~l~G~~~~v~sv~~spdg~~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~s-vaf 496 (902)
T 2oaj_A 418 LGALSAAQNKDYLLKGGVRTKRQKLPAEYGTAFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDK-ISF 496 (902)
T ss_dssp HHHHHTTBCCCCSCCCSBCCCCCCCCCSEEEEEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEE-EEE
T ss_pred HHHHhcccCCCCcccCCcCCCCcccccccCcEEEEecCCCcEEEEECCCccccCCceEEeechhhcCCCCCCceeE-EEe
Confidence 4 238999999999999999887531 11111 33445555 699
Q ss_pred cCCCCEEEEEECCCcEEEEeCCc-----------------------------------------------ceeeeecccc
Q 008820 433 TAVQHTLVVSHESGSIKVWRNDK-----------------------------------------------FMKSMQTHKG 465 (552)
Q Consensus 433 s~~~~~l~~g~~dg~i~iwd~~~-----------------------------------------------~~~~~~~h~~ 465 (552)
+|++++|++|+.||+|++||... ++..+.+|.+
T Consensus 497 spdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~ 576 (902)
T 2oaj_A 497 AAETLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKG 576 (902)
T ss_dssp ETTTTEEEEEETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSC
T ss_pred cCCCCeEEEEecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCC
Confidence 99999999999999999999542 2566788999
Q ss_pred eEEEEEe--cCCEEEEEeCCCeEEEEecCCCeeeeeeccCCCc-ccCcceEEEEEe-----CC-----eEEEEeCCCeEE
Q 008820 466 SVFAVFL--EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAI-PCGSVITALLYW-----QG-----KLFVGCADRTVK 532 (552)
Q Consensus 466 ~v~~v~~--~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~-~~~~~v~~l~~~-----~~-----~l~s~s~Dg~v~ 532 (552)
.|++++| || +||+|+.|++|++||+++............. .+...|++++|+ ++ .|++|+.|++|+
T Consensus 577 ~V~svafSpdG-~lAsgs~D~tv~lwd~~~~~~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D~tv~ 655 (902)
T 2oaj_A 577 KTSAINNSNIG-FVGIAYAAGSLMLIDRRGPAIIYMENIREISGAQSACVTCIEFVIMEYGDDGYSSILMVCGTDMGEVI 655 (902)
T ss_dssp SEEEEEECBTS-EEEEEETTSEEEEEETTTTEEEEEEEGGGTCSSCCCCEEEEEEEEEECTTSSSEEEEEEEEETTSEEE
T ss_pred cEEEEEecCCc-EEEEEeCCCcEEEEECCCCeEEEEeehhHhccccccceEEEEEEEEecCCCCCcceEEEEEecCCcEE
Confidence 9999987 88 9999999999999999887654321111111 347789999999 65 599999999999
Q ss_pred EEEec--CCcceeEEEeccc
Q 008820 533 IALCN--RQIPEIFSLLLHI 550 (552)
Q Consensus 533 iw~~~--~~~~~~~~~~gh~ 550 (552)
+|++. .++.....|.+|.
T Consensus 656 ~wd~~p~~~g~~~~~~~~~~ 675 (902)
T 2oaj_A 656 TYKILPASGGKFDVQLMDIT 675 (902)
T ss_dssp EEEEEECGGGCEEEEEEEEE
T ss_pred EEEEecCCCCcEEEEecCce
Confidence 99992 2555677888775
No 58
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=1.8e-32 Score=271.63 Aligned_cols=280 Identities=14% Similarity=0.231 Sum_probs=219.6
Q ss_pred EeecCccceEEEEEc------CCEEEEEeCCCcEEEEeCCCCeEEEEEeC-----CCCCeEEEEEecCC---CCEEEEEc
Q 008820 247 DLQGHRDCVTGLAVG------GGFLFSSSFDKSIHVWSLKDFSHVHTFKG-----HDHKVMAVVYVDED---QPLCISGD 312 (552)
Q Consensus 247 ~l~~H~~~V~~l~~s------~~~l~s~s~dg~I~iwd~~~~~~~~~~~~-----h~~~v~~v~~~~~~---~~~l~s~~ 312 (552)
...+|.++|++++|+ ...+++++.++.|++||+.+++.+..+.. |...|.+++|+|++ +.++++|+
T Consensus 13 ~~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~ 92 (366)
T 3k26_A 13 LKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAG 92 (366)
T ss_dssp EECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEE
T ss_pred eecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEec
Confidence 356899999999998 34577777777999999998887776654 56789999999974 35889999
Q ss_pred CCCcEEEEeCCCCCCCccccccccCCCceeeeEEEEee-CCCEEEEeeCCCcEEEEECCCCceeEEe---cCCCCCeEEE
Q 008820 313 SGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTT-SGRYLYTGSGDRTIKAWSLLDGTLSCTM---SGHKSAVSTL 388 (552)
Q Consensus 313 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~sgs~dg~i~iwd~~~~~~~~~~---~~h~~~v~~l 388 (552)
.||.|++||+.+++.... +..+.. .....++++ ++++|++|+.||.|++||+++++.+..+ .+|...|.++
T Consensus 93 ~dg~i~v~d~~~~~~~~~---~~~~~~--~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~ 167 (366)
T 3k26_A 93 SRGIIRIINPITMQCIKH---YVGHGN--AINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSA 167 (366)
T ss_dssp TTCEEEEECTTTCCEEEE---EESCCS--CEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEE
T ss_pred CCCEEEEEEchhceEeee---ecCCCC--cEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEE
Confidence 999999999987644333 332222 223346777 7889999999999999999999999988 7899999999
Q ss_pred EEe--CCEEEEEeCCCcEEEEECCCCceeEEEec---------------------------CCCCceEEEEEEcCCCCEE
Q 008820 389 AVC--NGVLYSGSRDGTIRLWSLSDHSLLTVLEE---------------------------DSSGAVSSVLSLTAVQHTL 439 (552)
Q Consensus 389 ~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~---------------------------~~~~~~~~~~~~s~~~~~l 439 (552)
+|+ +++|++++.||.|++||+++++....+.. .+...+.+ +.|+ ++++
T Consensus 168 ~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-~~~~--~~~l 244 (366)
T 3k26_A 168 DYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDC-VRWL--GDLI 244 (366)
T ss_dssp EECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCE-EEEE--TTEE
T ss_pred EECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEE-EEEc--CCEE
Confidence 999 44999999999999999998765433321 13344554 5676 7799
Q ss_pred EEEECCCcEEEEeCCcc----------------eeeeecccceEEEEEe--c--CCEEEEEeCCCeEEEEecCCCeeee-
Q 008820 440 VVSHESGSIKVWRNDKF----------------MKSMQTHKGSVFAVFL--E--GKWLFTGGWDKTVSVQELAGDEFEE- 498 (552)
Q Consensus 440 ~~g~~dg~i~iwd~~~~----------------~~~~~~h~~~v~~v~~--~--~~~l~sgs~dg~i~iwd~~~~~~~~- 498 (552)
++++.||.|++||.++. +..+..|...|.++.+ + +++|++|+.||.|++||+.+++...
T Consensus 245 ~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~ 324 (366)
T 3k26_A 245 LSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKA 324 (366)
T ss_dssp EEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSGGGC
T ss_pred EEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCCccc
Confidence 99999999999996532 5566778888877765 6 9999999999999999999875432
Q ss_pred ---eeccCCCcccCcceEEEEEeC--CeEEEEeCCCeEEEEEec
Q 008820 499 ---DVIPTGAIPCGSVITALLYWQ--GKLFVGCADRTVKIALCN 537 (552)
Q Consensus 499 ---~~~~~~~~~~~~~v~~l~~~~--~~l~s~s~Dg~v~iw~~~ 537 (552)
.+..+ .+...|.+++|++ ..|++++.||.|++||+.
T Consensus 325 ~~~~~~~~---~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~ 365 (366)
T 3k26_A 325 KCTTLTHH---KCGAAIRQTSFSRDSSILIAVCDDASIWRWDRL 365 (366)
T ss_dssp EEEEECCT---TCCSCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred cceEEccc---ccCCceEEEEeCCCCCeEEEEeCCCEEEEEEec
Confidence 22221 1257799999995 359999999999999985
No 59
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.7e-32 Score=282.83 Aligned_cols=273 Identities=10% Similarity=0.042 Sum_probs=199.7
Q ss_pred CCEEEEEeCCCcEEEEeCCCCeE----EEEEeCCCCCeEEEEEecC-----CCCEEEEEcCCCcEEEEeCCCCCCCc---
Q 008820 262 GGFLFSSSFDKSIHVWSLKDFSH----VHTFKGHDHKVMAVVYVDE-----DQPLCISGDSGGGIFVWSFSFPLGHE--- 329 (552)
Q Consensus 262 ~~~l~s~s~dg~I~iwd~~~~~~----~~~~~~h~~~v~~v~~~~~-----~~~~l~s~~~dg~i~vwd~~~~~~~~--- 329 (552)
++.+++++.|++|+|||+.+++. ..++.+|.+.|.+++|+|+ +..+|++++.||+|++||+..+....
T Consensus 173 ~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~ 252 (524)
T 2j04_B 173 LEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVF 252 (524)
T ss_dssp ---------CEEEEEEEEETTTCCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEE
T ss_pred hhhhccCCCCceEEEEEccCCCCCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccc
Confidence 56778888999999999987654 2456778899999999996 24689999999999999998654321
Q ss_pred -----cccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCc-eeEEecCCCCCeEEEE--Ee-C--CEEEEE
Q 008820 330 -----PLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGT-LSCTMSGHKSAVSTLA--VC-N--GVLYSG 398 (552)
Q Consensus 330 -----~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~-~~~~~~~h~~~v~~l~--~~-~--~~l~s~ 398 (552)
+...+..+.. .....+|+++ ..|++|+.||+|++||+++++ +...+.+|...|++++ |+ + .+|++|
T Consensus 253 ~~~~~p~~~l~~h~~--~v~sv~~s~~-~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~ 329 (524)
T 2j04_B 253 KMCEKPSLTLSLADS--LITTFDFLSP-TTVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTV 329 (524)
T ss_dssp ECCCSCSEEECCTTT--CEEEEEESSS-SEEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEE
T ss_pred eeecCceEEEEcCCC--CEEEEEecCC-CeEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEe
Confidence 1112222222 1122344443 589999999999999998764 5567889999999994 45 3 489999
Q ss_pred eCCCcEEEEECCCCceeEEEecCCCC-ceEEEEEEcCCCCEEEEEECCCcEEEEeCCc--ceeeeecccceEEEEEe--c
Q 008820 399 SRDGTIRLWSLSDHSLLTVLEEDSSG-AVSSVLSLTAVQHTLVVSHESGSIKVWRNDK--FMKSMQTHKGSVFAVFL--E 473 (552)
Q Consensus 399 ~~dg~i~iwd~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~~--~~~~~~~h~~~v~~v~~--~ 473 (552)
+.|++|++||++++++...+..+... .+.+ ++|+|++..+++++.|++|++||.+. +...+.+|.+.|++++| +
T Consensus 330 S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~-v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~ 408 (524)
T 2j04_B 330 AVDGYFYIFNPKDIATTKTTVSRFRGSNLVP-VVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSRL 408 (524)
T ss_dssp ETTSEEEEECGGGHHHHCEEEEECSCCSCCC-EEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEECCSS
T ss_pred ccCCeEEEEECCCCCcccccccccccCcccc-eEeCCCcCeEEEeCCCCcEEEEECcccccceeeecCCCceEEEEeCCC
Confidence 99999999999998877666654332 2334 68999999999999999999999764 45778899999999987 8
Q ss_pred CCEEEEEeCCCeEEEEecCCCeeee--------------ee--ccC------------------C-----CcccCcceEE
Q 008820 474 GKWLFTGGWDKTVSVQELAGDEFEE--------------DV--IPT------------------G-----AIPCGSVITA 514 (552)
Q Consensus 474 ~~~l~sgs~dg~i~iwd~~~~~~~~--------------~~--~~~------------------~-----~~~~~~~v~~ 514 (552)
+++|++|+.||+|++||+....+.. .. ... + -..+...|.+
T Consensus 409 g~~l~Sgs~Dgtv~lwd~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~~~~~~~~~~~~~~~~g~~~~~l~gh~~~V~~ 488 (524)
T 2j04_B 409 HPMVLAGSADGSLIITNAARRLLHGIKNSSATQKSLRLWKWDYSIKDDKYRIDSSYEVYPLTVNDVSKAKIDAHGINITC 488 (524)
T ss_dssp CCBCEEEETTTEEECCBSCSSTTTCC------CCCCEEEECBCCSSSCEEEECCCCCCCC-------------CCCSCCC
T ss_pred CCeEEEEECCCEEEEEechHhhccccccCccceeeeEEEEeccCCCCCeEEccCCceecccccCCcceeeecCCCceEEE
Confidence 9999999999999999975321110 00 000 0 0124567899
Q ss_pred EEEeCC-----eEEEEeCCCeEEEEEecC
Q 008820 515 LLYWQG-----KLFVGCADRTVKIALCNR 538 (552)
Q Consensus 515 l~~~~~-----~l~s~s~Dg~v~iw~~~~ 538 (552)
++|+|+ .+++|+.||.|+||++..
T Consensus 489 Vafsp~~~~~~~lAsg~~~g~vrlw~l~~ 517 (524)
T 2j04_B 489 TKWNETSAGGKCYAFSNSAGLLTLEYLSL 517 (524)
T ss_dssp EEECCSTTTTTEEEEECTTSEEEEEECSC
T ss_pred EECCCCCCccHHHHhhccCceEEEEEccc
Confidence 999975 589999999999999874
No 60
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=3.7e-31 Score=266.23 Aligned_cols=281 Identities=15% Similarity=0.161 Sum_probs=224.8
Q ss_pred EEEEeecCccc--eEEEEEcCCEEEEEeCCCcEEEEeCCCCeEEEEEeC-CCCCeEEEEEecCCCCEEEEEcCCCcEEEE
Q 008820 244 KFKDLQGHRDC--VTGLAVGGGFLFSSSFDKSIHVWSLKDFSHVHTFKG-HDHKVMAVVYVDEDQPLCISGDSGGGIFVW 320 (552)
Q Consensus 244 ~~~~l~~H~~~--V~~l~~s~~~l~s~s~dg~I~iwd~~~~~~~~~~~~-h~~~v~~v~~~~~~~~~l~s~~~dg~i~vw 320 (552)
.+.+..+|.+. +.+++|+++.+++++.|+.|++||+.+++....+.. |...|.+++|+|++ .+|++|+.||.|++|
T Consensus 83 ~~~~~~~~~~~~~~~~~~~s~~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~-~~l~~~~~dg~i~iw 161 (401)
T 4aez_A 83 RVLDAPGIIDDYYLNLLDWSNLNVVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSHDG-SFLSVGLGNGLVDIY 161 (401)
T ss_dssp EEEECTTCCCCTTCBCEEECTTSEEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTS-SEEEEEETTSCEEEE
T ss_pred eeeeCCCCcCCceEEEEeecCCCEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCC-CEEEEECCCCeEEEE
Confidence 34556677665 566788877788999999999999999999888876 88999999999965 478999999999999
Q ss_pred eCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECC-CCceeEEecCCCCCeEEEEEe--CCEEEE
Q 008820 321 SFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLL-DGTLSCTMSGHKSAVSTLAVC--NGVLYS 397 (552)
Q Consensus 321 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~-~~~~~~~~~~h~~~v~~l~~~--~~~l~s 397 (552)
|+.++.....+ ..+ ...+.++.++++.+++|+.||.|++||++ ....+..+.+|...|.+++|+ +.+|++
T Consensus 162 d~~~~~~~~~~---~~~----~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s 234 (401)
T 4aez_A 162 DVESQTKLRTM---AGH----QARVGCLSWNRHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLAS 234 (401)
T ss_dssp ETTTCCEEEEE---CCC----SSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEE
T ss_pred ECcCCeEEEEe---cCC----CCceEEEEECCCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEE
Confidence 99876433332 222 22456777788999999999999999998 567788899999999999999 349999
Q ss_pred EeCCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCC-CEEEEEE--CCCcEEEEeCCc--ceeeeecccceEEEEEe
Q 008820 398 GSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQ-HTLVVSH--ESGSIKVWRNDK--FMKSMQTHKGSVFAVFL 472 (552)
Q Consensus 398 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~-~~l~~g~--~dg~i~iwd~~~--~~~~~~~h~~~v~~v~~ 472 (552)
|+.|+.|++||+++++.+..+..+. ..+.+ ++|+|++ .++++|+ .|+.|++||+.+ ....+. |...+.++.|
T Consensus 235 ~~~d~~v~iwd~~~~~~~~~~~~~~-~~v~~-~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~-~~~~v~~~~~ 311 (401)
T 4aez_A 235 GGNDNVVQIWDARSSIPKFTKTNHN-AAVKA-VAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVD-AGSQVTSLIW 311 (401)
T ss_dssp EETTSCEEEEETTCSSEEEEECCCS-SCCCE-EEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEE-CSSCEEEEEE
T ss_pred EeCCCeEEEccCCCCCccEEecCCc-ceEEE-EEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEe-CCCcEEEEEE
Confidence 9999999999999999888887653 44454 6899976 5666654 699999999653 445554 5678888887
Q ss_pred --cCCEEEEE--eCCCeEEEEecCCCeeeeeeccCCCcccCcceEEEEEeCC--eEEEEeCCCeEEEEEecC
Q 008820 473 --EGKWLFTG--GWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQG--KLFVGCADRTVKIALCNR 538 (552)
Q Consensus 473 --~~~~l~sg--s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~--~l~s~s~Dg~v~iw~~~~ 538 (552)
++++++++ +.||.|++||+.++.......... +...|.+++|+++ .|++++.||.|++|++..
T Consensus 312 s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~---h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~ 380 (401)
T 4aez_A 312 SPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPA---HDTRVLYSALSPDGRILSTAASDENLKFWRVYD 380 (401)
T ss_dssp CSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEEC---CSSCCCEEEECTTSSEEEEECTTSEEEEEECCC
T ss_pred CCCCCeEEEEeecCCCcEEEEecCCccceeEEEecC---CCCCEEEEEECCCCCEEEEEeCCCcEEEEECCC
Confidence 89999984 489999999999876554433222 2667999999953 499999999999999984
No 61
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=4.3e-32 Score=274.73 Aligned_cols=274 Identities=20% Similarity=0.272 Sum_probs=215.0
Q ss_pred cceEEEEEc--CCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEE-EEecCCCCEEEEEcCCCcEEEEeCCCCCCCc
Q 008820 253 DCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAV-VYVDEDQPLCISGDSGGGIFVWSFSFPLGHE 329 (552)
Q Consensus 253 ~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~~~~~~~~~h~~~v~~v-~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~ 329 (552)
..+++++|+ +++|++++.|+.|++||+.+++....+..| .+..+ .|++ ++.++++++.||.|++||+.++...
T Consensus 57 ~~~~~~~~s~~g~~l~~~~~d~~v~i~d~~~~~~~~~~~~~--~~~~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~- 132 (420)
T 3vl1_A 57 DAGKGNTFEKVGSHLYKARLDGHDFLFNTIIRDGSKMLKRA--DYTAVDTAKL-QMRRFILGTTEGDIKVLDSNFNLQR- 132 (420)
T ss_dssp BCCTTCEEEEEETTEEEEEETTEEEEEECCSEETTTTSCSC--CEEEEEEECS-SSCEEEEEETTSCEEEECTTSCEEE-
T ss_pred ccccceeeeecCCeEEEEEcCCcEEEEEecccceeeEEecC--CceEEEEEec-CCCEEEEEECCCCEEEEeCCCccee-
Confidence 345578888 999999999999999999887776666655 44444 5555 4558899999999999999865432
Q ss_pred cccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe--CCEEEEEeCCCcEEEE
Q 008820 330 PLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC--NGVLYSGSRDGTIRLW 407 (552)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iw 407 (552)
..+..+.. .....++++++++|++|+.|+.|++||+++++.+..+.+|...|++++|+ +.+|++++.|++|++|
T Consensus 133 --~~~~~h~~--~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iw 208 (420)
T 3vl1_A 133 --EIDQAHVS--EITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLW 208 (420)
T ss_dssp --EETTSSSS--CEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEE
T ss_pred --eecccccC--ccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEe
Confidence 22223322 22345788899999999999999999999999999999999999999999 3499999999999999
Q ss_pred ECCCCceeEEEecCC--CCceEEE--------------------EEEcCCCCEEEEEECCCcEEEEeCCcc--eee-eec
Q 008820 408 SLSDHSLLTVLEEDS--SGAVSSV--------------------LSLTAVQHTLVVSHESGSIKVWRNDKF--MKS-MQT 462 (552)
Q Consensus 408 d~~~~~~~~~~~~~~--~~~~~~~--------------------~~~s~~~~~l~~g~~dg~i~iwd~~~~--~~~-~~~ 462 (552)
|+++++.+..+..+. ...+..+ ++|+|+++++++|+.||.|++||++.. ... ...
T Consensus 209 d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~ 288 (420)
T 3vl1_A 209 ECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSK 288 (420)
T ss_dssp ETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCT
T ss_pred ECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccc
Confidence 999999988887532 2222221 346789999999999999999997643 333 345
Q ss_pred ccceEEEEEe--cCC-EEEEEeCCCeEEEEecCCCee-eeeeccCCCcccCcceEEEEEeCC-eEEEEeCCCeEEEEEec
Q 008820 463 HKGSVFAVFL--EGK-WLFTGGWDKTVSVQELAGDEF-EEDVIPTGAIPCGSVITALLYWQG-KLFVGCADRTVKIALCN 537 (552)
Q Consensus 463 h~~~v~~v~~--~~~-~l~sgs~dg~i~iwd~~~~~~-~~~~~~~~~~~~~~~v~~l~~~~~-~l~s~s~Dg~v~iw~~~ 537 (552)
|...|.++.| ++. +|++|+.||.|++||+++++. ...+... +...|.++.+.++ .|++++.||.|++|++.
T Consensus 289 ~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~----~~~~v~~~~~~~~~~l~s~~~d~~v~iw~~~ 364 (420)
T 3vl1_A 289 FTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLIN----EGTPINNVYFAAGALFVSSGFDTSIKLDIIS 364 (420)
T ss_dssp TSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEES----TTSCEEEEEEETTEEEEEETTTEEEEEEEEC
T ss_pred cCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhcc----CCCCceEEEeCCCCEEEEecCCccEEEEecc
Confidence 8889999988 666 999999999999999987643 3333221 2567899988876 48999999999999997
Q ss_pred C
Q 008820 538 R 538 (552)
Q Consensus 538 ~ 538 (552)
.
T Consensus 365 ~ 365 (420)
T 3vl1_A 365 D 365 (420)
T ss_dssp C
T ss_pred C
Confidence 5
No 62
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=2.3e-30 Score=275.23 Aligned_cols=322 Identities=16% Similarity=0.181 Sum_probs=244.9
Q ss_pred CCCccccceeeecCcc-eEEEeeCCCeEEEEE---------eecCcc---ceEEEEEc---CCEEEEEeCCCcEEEEeCC
Q 008820 217 SDGADIDQARAAGGVK-DLVNGLSKGNVKFKD---------LQGHRD---CVTGLAVG---GGFLFSSSFDKSIHVWSLK 280 (552)
Q Consensus 217 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~---------l~~H~~---~V~~l~~s---~~~l~s~s~dg~I~iwd~~ 280 (552)
.+...+..+.+.+.+. .++++..++.+.+|+ +.+|.+ .|++++|+ +++|++++.||.|++||+.
T Consensus 158 ~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~ 237 (615)
T 1pgu_A 158 GHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGK 237 (615)
T ss_dssp SCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETT
T ss_pred cCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECC
Confidence 3445678888888887 788999999988887 467999 99999998 5799999999999999999
Q ss_pred CCeEEEEE-e---CCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCccccccccCCCceeeeEEEEeeCCCEEE
Q 008820 281 DFSHVHTF-K---GHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLY 356 (552)
Q Consensus 281 ~~~~~~~~-~---~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 356 (552)
+++.+..+ . .|...|.+++|+ ++.++++++.|+.|++||+.+++....+............ ...+ +++++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~l~ 313 (615)
T 1pgu_A 238 SGEFLKYIEDDQEPVQGGIFALSWL--DSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQV-GVVA-TGNGRII 313 (615)
T ss_dssp TCCEEEECCBTTBCCCSCEEEEEES--SSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEE-EEEE-EETTEEE
T ss_pred CCCEeEEecccccccCCceEEEEEc--CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcccCcee-EEEe-CCCCeEE
Confidence 99999999 6 899999999998 5568899999999999999876543333222111111111 1223 3888999
Q ss_pred EeeCCCcEEEEECCCCceeEEecCCCCCeEEEEE---------------------------------e-CCEEEEEeCCC
Q 008820 357 TGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAV---------------------------------C-NGVLYSGSRDG 402 (552)
Q Consensus 357 sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~---------------------------------~-~~~l~s~~~dg 402 (552)
+++.||.|++||+.+++.+..+.+|...|++++| . ++.+++++.|+
T Consensus 314 ~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~ 393 (615)
T 1pgu_A 314 SLSLDGTLNFYELGHDEVLKTISGHNKGITALTVNPLISGSYDGRIMEWSSSSMHQDHSNLIVSLDNSKAQEYSSISWDD 393 (615)
T ss_dssp EEETTSCEEEEETTEEEEEEEECCCSSCEEEEETTTTEEEETTSCEEETTTTEEECCCCSCEEEEECCSTTCCEEEETTT
T ss_pred EEECCCCEEEEECCCCcEEEEEeCCCCCEEEEEecCcEEECCCCeEEEEEchhhcCcccCceEEEEECCCcEEEEEeCCC
Confidence 9999999999999998888888877777776666 2 23555555555
Q ss_pred cEEEEECCC----------------------------------CceeEEEecCCCCceEEEEEEcCCCCEEEEEEC-CCc
Q 008820 403 TIRLWSLSD----------------------------------HSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHE-SGS 447 (552)
Q Consensus 403 ~i~iwd~~~----------------------------------~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~-dg~ 447 (552)
.|++||+.+ ++.+..+. +...+.. ++++ ++++++++. ||.
T Consensus 394 ~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~--~~~l~~~~~~d~~ 468 (615)
T 1pgu_A 394 TLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVR--LNSPGSA-VSLS--QNYVAVGLEEGNT 468 (615)
T ss_dssp EEEETTEEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEE--CSSCEEE-EEEC--SSEEEEEETTTSC
T ss_pred CEEEEEcccCcccCCceEEEEcCCCCEEEEeCCCceEEEeccCCceeeecc--cCCCceE-EEEc--CCEEEEeecCCCe
Confidence 555555432 22222222 1222333 4566 889999999 999
Q ss_pred EEEEeCCcc-e--eeeecccceEEEEEe--cCCEEEEEeCCCeEEEEecCCCeeeeeeccCCCcccCcceEEEEEeC---
Q 008820 448 IKVWRNDKF-M--KSMQTHKGSVFAVFL--EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQ--- 519 (552)
Q Consensus 448 i~iwd~~~~-~--~~~~~h~~~v~~v~~--~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~~--- 519 (552)
|++||.... . ..+..|...|.++.+ ++++|++++.||.|++||+.+++....+... +...|++++|+|
T Consensus 469 i~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~----h~~~v~~~~~sp~~~ 544 (615)
T 1pgu_A 469 IQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAF----RTSKINAISWKPAEK 544 (615)
T ss_dssp EEEEETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEECCSCC----CSSCEEEEEECCCC-
T ss_pred EEEEECCCccccccccCCccCceEEEEECCCCCEEEEcCCCCeEEEeeCCCCcceeEeecC----CCCceeEEEEcCccc
Confidence 999997642 2 567789999999987 8999999999999999999988776554321 367799999987
Q ss_pred -------C--eEEEEeCCCeEEEEEecCCcceeEEEecccc
Q 008820 520 -------G--KLFVGCADRTVKIALCNRQIPEIFSLLLHIN 551 (552)
Q Consensus 520 -------~--~l~s~s~Dg~v~iw~~~~~~~~~~~~~gh~~ 551 (552)
+ .|++|+.||.|++|+++.....+..+.+|..
T Consensus 545 ~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~ 585 (615)
T 1pgu_A 545 GANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKD 585 (615)
T ss_dssp -----CCSCCEEEEEETTSCEEEEESSCTTCCEEETTSSTT
T ss_pred cccccccCCCEEEEEcCCCcEEEEECCCCceechhhhcCcc
Confidence 4 4999999999999999865567778888853
No 63
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=2.7e-31 Score=263.17 Aligned_cols=270 Identities=11% Similarity=0.138 Sum_probs=216.6
Q ss_pred Cccccceeeec----CcceEEEeeCCCeEEEEEee--------------cCccceEEEEEc------CCEEEEEeCCCcE
Q 008820 219 GADIDQARAAG----GVKDLVNGLSKGNVKFKDLQ--------------GHRDCVTGLAVG------GGFLFSSSFDKSI 274 (552)
Q Consensus 219 ~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~l~--------------~H~~~V~~l~~s------~~~l~s~s~dg~I 274 (552)
...+..+.+.+ ....++.+..++.+.+|++. .|...|++++|+ +++|++|+.||.|
T Consensus 18 ~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i 97 (366)
T 3k26_A 18 NQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGII 97 (366)
T ss_dssp CSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETTCEE
T ss_pred CCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCCCEE
Confidence 34577777776 35556666667788888753 266789999998 2589999999999
Q ss_pred EEEeCCCCeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCccccccccCCCceeeeEEEEeeCCCE
Q 008820 275 HVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRY 354 (552)
Q Consensus 275 ~iwd~~~~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (552)
++||+.+++.+..+.+|...|.+++|+|.++.++++++.||.|++||++++.....+.....+.. .....++++++++
T Consensus 98 ~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~ 175 (366)
T 3k26_A 98 RIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRD--EVLSADYDLLGEK 175 (366)
T ss_dssp EEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSS--CEEEEEECTTSSE
T ss_pred EEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccC--ceeEEEECCCCCE
Confidence 99999999999999999999999999996667899999999999999987654433322223322 2234577788999
Q ss_pred EEEeeCCCcEEEEECCCCceeEEe----------------------------cCCCCCeEEEEEeCCEEEEEeCCCcEEE
Q 008820 355 LYTGSGDRTIKAWSLLDGTLSCTM----------------------------SGHKSAVSTLAVCNGVLYSGSRDGTIRL 406 (552)
Q Consensus 355 l~sgs~dg~i~iwd~~~~~~~~~~----------------------------~~h~~~v~~l~~~~~~l~s~~~dg~i~i 406 (552)
|++++.||.|++||+++++....+ .+|...|.+++|+++++++++.|+.|++
T Consensus 176 l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~~ 255 (366)
T 3k26_A 176 IMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWLGDLILSKSCENAIVC 255 (366)
T ss_dssp EEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEETTEEEEECSSSEEEE
T ss_pred EEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEcCCEEEEEecCCEEEE
Confidence 999999999999999987654433 3499999999999889999999999999
Q ss_pred EECCCCce--------------eEEEecCCCCceEEEEEEcCC--CCEEEEEECCCcEEEEeCCc------ceeeeecc-
Q 008820 407 WSLSDHSL--------------LTVLEEDSSGAVSSVLSLTAV--QHTLVVSHESGSIKVWRNDK------FMKSMQTH- 463 (552)
Q Consensus 407 wd~~~~~~--------------~~~~~~~~~~~~~~~~~~s~~--~~~l~~g~~dg~i~iwd~~~------~~~~~~~h- 463 (552)
||+++++. +..+..+. ..+.. ++|+|+ +++|++|+.||.|++||+.. ....+.+|
T Consensus 256 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~-~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~ 333 (366)
T 3k26_A 256 WKPGKMEDDIDKIKPSESNVTILGRFDYSQ-CDIWY-MRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKCTTLTHHK 333 (366)
T ss_dssp EEESSTTCCGGGCCTTCCCEEEEEEEECSS-CCSSC-CCCEECTTSSEEEEECTTSCEEEEECCSSSGGGCEEEEECCTT
T ss_pred EeCCCccccccccccCCcchheeccccccC-CcEEE-EEEcCCCCCcEEEEEecCCcEEEEECCCCCCccccceEEcccc
Confidence 99988754 55565553 33444 588888 99999999999999999754 33467777
Q ss_pred -cceEEEEEe--cCCEEEEEeCCCeEEEEecC
Q 008820 464 -KGSVFAVFL--EGKWLFTGGWDKTVSVQELA 492 (552)
Q Consensus 464 -~~~v~~v~~--~~~~l~sgs~dg~i~iwd~~ 492 (552)
...|.++.| ++++|++++.||.|++||+.
T Consensus 334 ~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~ 365 (366)
T 3k26_A 334 CGAAIRQTSFSRDSSILIAVCDDASIWRWDRL 365 (366)
T ss_dssp CCSCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred cCCceEEEEeCCCCCeEEEEeCCCEEEEEEec
Confidence 789999987 89999999999999999985
No 64
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=9.8e-31 Score=282.15 Aligned_cols=269 Identities=21% Similarity=0.364 Sum_probs=214.4
Q ss_pred CCCccccceeeecC-cceEEEeeCCCeEEEEE--------------eecCccceEEEEEc--CCEEEEEeCCCcEEEEeC
Q 008820 217 SDGADIDQARAAGG-VKDLVNGLSKGNVKFKD--------------LQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSL 279 (552)
Q Consensus 217 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~--------------l~~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~ 279 (552)
.+...+..+.+.+. ...+++++.++.+++|+ +.+|...|++++|+ +++|+||+.||+|+|||+
T Consensus 380 ~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~ 459 (694)
T 3dm0_A 380 AHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDL 459 (694)
T ss_dssp CCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred cCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEEC
Confidence 34455777777765 46788999999999996 45899999999999 899999999999999999
Q ss_pred CCCeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCccccccccCCCceeeeEEEEeeCC--CEEEE
Q 008820 280 KDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSG--RYLYT 357 (552)
Q Consensus 280 ~~~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~l~s 357 (552)
.+++....+.+|...|.+++|+|++. ++++|+.|++|++||...............+.. .....++++++ ..+++
T Consensus 460 ~~~~~~~~~~~h~~~v~~~~~s~~~~-~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~--~v~~~~~~~~~~~~~l~s 536 (694)
T 3dm0_A 460 AAGVSTRRFVGHTKDVLSVAFSLDNR-QIVSASRDRTIKLWNTLGECKYTISEGGEGHRD--WVSCVRFSPNTLQPTIVS 536 (694)
T ss_dssp TTTEEEEEEECCSSCEEEEEECTTSS-CEEEEETTSCEEEECTTSCEEEEECSSTTSCSS--CEEEEEECSCSSSCEEEE
T ss_pred CCCcceeEEeCCCCCEEEEEEeCCCC-EEEEEeCCCEEEEEECCCCcceeeccCCCCCCC--cEEEEEEeCCCCcceEEE
Confidence 99999999999999999999999765 679999999999999764321111111112221 22345677765 48999
Q ss_pred eeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe--CCEEEEEeCCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCC
Q 008820 358 GSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC--NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAV 435 (552)
Q Consensus 358 gs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~ 435 (552)
|+.|++|++||++++++...+.+|...|++++|+ +.+|++|+.||+|++||+++++.+..+..+ ..+.+ ++|+|+
T Consensus 537 ~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~~~--~~v~~-~~~sp~ 613 (694)
T 3dm0_A 537 ASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEAN--SVIHA-LCFSPN 613 (694)
T ss_dssp EETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCBCS--SCEEE-EEECSS
T ss_pred EeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEecCC--CcEEE-EEEcCC
Confidence 9999999999999999999999999999999999 349999999999999999999988777643 33444 799999
Q ss_pred CCEEEEEECCCcEEEEeCCc--ceeeeecc-------------------cceEEEEEe--cCCEEEEEeCCCeEEEEecC
Q 008820 436 QHTLVVSHESGSIKVWRNDK--FMKSMQTH-------------------KGSVFAVFL--EGKWLFTGGWDKTVSVQELA 492 (552)
Q Consensus 436 ~~~l~~g~~dg~i~iwd~~~--~~~~~~~h-------------------~~~v~~v~~--~~~~l~sgs~dg~i~iwd~~ 492 (552)
+.++++++ ++.|++||+.. .+..+..+ ...+.++.| +|++|++|+.||.|++||+.
T Consensus 614 ~~~l~~~~-~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~i~iW~i~ 692 (694)
T 3dm0_A 614 RYWLCAAT-EHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYTDGVIRVWGIG 692 (694)
T ss_dssp SSEEEEEE-TTEEEEEETTTTEEEEEECCCCC----------------CCCCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred CcEEEEEc-CCCEEEEECCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEEEEcCCCeEEEEecc
Confidence 98887765 55699999764 33333221 123566766 89999999999999999985
No 65
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=1.9e-30 Score=285.30 Aligned_cols=282 Identities=17% Similarity=0.265 Sum_probs=239.3
Q ss_pred EEEeecCccceEEEEEc--CCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeC
Q 008820 245 FKDLQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSF 322 (552)
Q Consensus 245 ~~~l~~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~ 322 (552)
.+.+.+|.+.|++++|+ +++|++|+.||.|+|||+.+++.+..+.+|...|.+++|+|++. +|++++.||.|++||+
T Consensus 6 ~~~~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~dg~i~vw~~ 84 (814)
T 3mkq_A 6 KKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKN-WIIVGSDDFRIRVFNY 84 (814)
T ss_dssp EEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGT-EEEEEETTSEEEEEET
T ss_pred ceeeecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCC-EEEEEeCCCeEEEEEC
Confidence 46789999999999999 99999999999999999999999999999999999999999665 7799999999999999
Q ss_pred CCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCC-ceeEEecCCCCCeEEEEEeC---CEEEEE
Q 008820 323 SFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDG-TLSCTMSGHKSAVSTLAVCN---GVLYSG 398 (552)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~-~~~~~~~~h~~~v~~l~~~~---~~l~s~ 398 (552)
.++.....+ ..+.. .....++++++++|++|+.||.|++||++++ .....+.+|...|.+++|++ +.++++
T Consensus 85 ~~~~~~~~~---~~~~~--~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~ 159 (814)
T 3mkq_A 85 NTGEKVVDF---EAHPD--YIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASG 159 (814)
T ss_dssp TTCCEEEEE---ECCSS--CEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEE
T ss_pred CCCcEEEEE---ecCCC--CEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEE
Confidence 876543333 22322 2234578899999999999999999999887 77788899999999999984 389999
Q ss_pred eCCCcEEEEECCCCceeEEEecCCCCceEEEEEEcC--CCCEEEEEECCCcEEEEeCC--cceeeeecccceEEEEEe--
Q 008820 399 SRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTA--VQHTLVVSHESGSIKVWRND--KFMKSMQTHKGSVFAVFL-- 472 (552)
Q Consensus 399 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~--~~~~l~~g~~dg~i~iwd~~--~~~~~~~~h~~~v~~v~~-- 472 (552)
+.||+|++||+.+++....+..++...+.. ++++| ++.++++++.||.|++||.. +....+.+|...|.++.|
T Consensus 160 ~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~-~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~ 238 (814)
T 3mkq_A 160 CLDRTVKVWSLGQSTPNFTLTTGQERGVNY-VDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHP 238 (814)
T ss_dssp ETTSEEEEEETTCSSCSEEEECCCTTCCCE-EEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEECCSSCEEEEEECS
T ss_pred eCCCeEEEEECCCCcceeEEecCCCCCEEE-EEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcC
Confidence 999999999999998888887766455555 68888 99999999999999999965 467788899999999887
Q ss_pred cCCEEEEEeCCCeEEEEecCCCeeeeeeccCCCcccCcceEEEEEeCC-e--EEEEeCCCeEEEEEecC
Q 008820 473 EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQG-K--LFVGCADRTVKIALCNR 538 (552)
Q Consensus 473 ~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~-~--l~s~s~Dg~v~iw~~~~ 538 (552)
++.+|++++.||.|++||+.+++........ ...+.+++|+++ . +++++.|+.+.+|++..
T Consensus 239 ~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (814)
T 3mkq_A 239 TLPIIISGSEDGTLKIWNSSTYKVEKTLNVG-----LERSWCIATHPTGRKNYIASGFDNGFTVLSLGN 302 (814)
T ss_dssp SSSEEEEEETTSCEEEEETTTCSEEEEECCS-----SSSEEEEEECTTCGGGEEEEEETTEEEEEECSC
T ss_pred CCCEEEEEeCCCeEEEEECCCCcEEEEeecC-----CCcEEEEEEccCCCceEEEEEeCCCEEEEEcCC
Confidence 8899999999999999999987766655443 567999999964 2 56666788899999864
No 66
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.5e-30 Score=253.92 Aligned_cols=274 Identities=17% Similarity=0.237 Sum_probs=232.0
Q ss_pred CCccccceeeecCcceEEEeeCCCeEEEEE---------eecCccceEEEEEc--CCEEEEEeCCCcEEEEeCCCCeEEE
Q 008820 218 DGADIDQARAAGGVKDLVNGLSKGNVKFKD---------LQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVH 286 (552)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------l~~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~~~~~ 286 (552)
+...+..+.+++.++.++++..++.+.+|+ +.+|.+.|++++|+ +++|++++.||+|++||+.+++.+.
T Consensus 31 h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~ 110 (369)
T 3zwl_B 31 HERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVA 110 (369)
T ss_dssp CSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEE
T ss_pred eeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEE
Confidence 344588888999999999999999999987 56799999999999 8999999999999999999999999
Q ss_pred EEeCCCCCeEEEEEecCCCCEEEEEcCC-----CcEEEEeCCCCCCCcccccc--------ccCCCceeeeEEEEeeCCC
Q 008820 287 TFKGHDHKVMAVVYVDEDQPLCISGDSG-----GGIFVWSFSFPLGHEPLKKW--------NEEKDWRYSGIHALTTSGR 353 (552)
Q Consensus 287 ~~~~h~~~v~~v~~~~~~~~~l~s~~~d-----g~i~vwd~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~ 353 (552)
.+. |...|.+++|+|++. ++++++.+ +.|++||+........+... ..+.........+++++++
T Consensus 111 ~~~-~~~~v~~~~~~~~~~-~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (369)
T 3zwl_B 111 TWK-SPVPVKRVEFSPCGN-YFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGK 188 (369)
T ss_dssp EEE-CSSCEEEEEECTTSS-EEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGC
T ss_pred Eee-cCCCeEEEEEccCCC-EEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCC
Confidence 988 889999999999765 67888888 99999999876543322221 1121111344567888999
Q ss_pred EEEEeeCCCcEEEEECCC-CceeEEecCCCCCeEEEEEe--CCEEEEEeCCCcEEEEECCCCceeEEEecCCCCceEEEE
Q 008820 354 YLYTGSGDRTIKAWSLLD-GTLSCTMSGHKSAVSTLAVC--NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVL 430 (552)
Q Consensus 354 ~l~sgs~dg~i~iwd~~~-~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 430 (552)
.+++++.||.|++||+++ ++.+..+..|...|.+++|+ +.+|++++.|+.|++||+++++.+..+... ..+.. +
T Consensus 189 ~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~--~~~~~-~ 265 (369)
T 3zwl_B 189 YIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYETD--CPLNT-A 265 (369)
T ss_dssp EEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECS--SCEEE-E
T ss_pred EEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeeecCC--CCcee-E
Confidence 999999999999999998 78888999999999999999 349999999999999999999998888733 34444 6
Q ss_pred EEcCCCCEEEEEECCC--------------cEEEEeCC--cceeeeecccceEEEEEe--cCCEEEEEeCCCeEEEEecC
Q 008820 431 SLTAVQHTLVVSHESG--------------SIKVWRND--KFMKSMQTHKGSVFAVFL--EGKWLFTGGWDKTVSVQELA 492 (552)
Q Consensus 431 ~~s~~~~~l~~g~~dg--------------~i~iwd~~--~~~~~~~~h~~~v~~v~~--~~~~l~sgs~dg~i~iwd~~ 492 (552)
+++|+++++++++.++ .+++||.. +....+.+|...|.++.| ++++|++++.||.|++|+++
T Consensus 266 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~ 345 (369)
T 3zwl_B 266 VITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTVAISPQGTSYASGGEDGFIRLHHFE 345 (369)
T ss_dssp EECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEEEC
T ss_pred EecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccCcEEEEEECCCCCEEEEEcCCCeEEEEECc
Confidence 9999999999999988 89999954 567788899999999987 89999999999999999998
Q ss_pred CCee
Q 008820 493 GDEF 496 (552)
Q Consensus 493 ~~~~ 496 (552)
++..
T Consensus 346 ~~~~ 349 (369)
T 3zwl_B 346 KSYF 349 (369)
T ss_dssp HHHH
T ss_pred cccc
Confidence 6543
No 67
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=1.2e-30 Score=262.46 Aligned_cols=282 Identities=17% Similarity=0.233 Sum_probs=218.2
Q ss_pred EEEeecCccceEEEEEc---CCEEEEEeCCCcEEEEeCCCCeEEEEEe-------------CCCCCeEEEEEecCCCCEE
Q 008820 245 FKDLQGHRDCVTGLAVG---GGFLFSSSFDKSIHVWSLKDFSHVHTFK-------------GHDHKVMAVVYVDEDQPLC 308 (552)
Q Consensus 245 ~~~l~~H~~~V~~l~~s---~~~l~s~s~dg~I~iwd~~~~~~~~~~~-------------~h~~~v~~v~~~~~~~~~l 308 (552)
...+.+|.+.|++++|+ +++|++|+.||.|++||+.+++....+. +|...|.+++|+|++..++
T Consensus 36 ~~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l 115 (408)
T 4a11_B 36 RDVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMF 115 (408)
T ss_dssp EEECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCE
T ss_pred eeeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEE
Confidence 34577899999999997 7999999999999999999876544443 5999999999999777789
Q ss_pred EEEcCCCcEEEEeCCCCCCCccccccccCCCceeeeEEEEee---CCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCe
Q 008820 309 ISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTT---SGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAV 385 (552)
Q Consensus 309 ~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v 385 (552)
++++.||.|++||+.++.....+. ... . .....+.+ ++.++++|+.||.|++||+++++.+..+.+|...|
T Consensus 116 ~s~~~d~~i~iwd~~~~~~~~~~~---~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v 189 (408)
T 4a11_B 116 TSSSFDKTLKVWDTNTLQTADVFN---FEE--T-VYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEI 189 (408)
T ss_dssp EEEETTSEEEEEETTTTEEEEEEE---CSS--C-EEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCE
T ss_pred EEEeCCCeEEEeeCCCCccceecc---CCC--c-eeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcE
Confidence 999999999999998754333222 111 1 12234444 44599999999999999999999999999999999
Q ss_pred EEEEEe-C-C-EEEEEeCCCcEEEEECCCCc-eeEEEe--------------cCCCCceEEEEEEcCCCCEEEEEECCCc
Q 008820 386 STLAVC-N-G-VLYSGSRDGTIRLWSLSDHS-LLTVLE--------------EDSSGAVSSVLSLTAVQHTLVVSHESGS 447 (552)
Q Consensus 386 ~~l~~~-~-~-~l~s~~~dg~i~iwd~~~~~-~~~~~~--------------~~~~~~~~~~~~~s~~~~~l~~g~~dg~ 447 (552)
.+++|+ + . ++++++.||.|++||++++. .+..+. ..+...+.. ++|+|++++|++++.||.
T Consensus 190 ~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-~~~~~~~~~l~~~~~dg~ 268 (408)
T 4a11_B 190 LAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNG-LCFTSDGLHLLTVGTDNR 268 (408)
T ss_dssp EEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEE-EEECTTSSEEEEEETTSC
T ss_pred EEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeE-EEEcCCCCEEEEecCCCe
Confidence 999999 3 3 69999999999999998876 444442 123344554 699999999999999999
Q ss_pred EEEEeCCcce--eeeecc------cceEEEEEe-cCCEEEEEeCCCeEEEEecCCCeeeeeeccCCCcccCcceEEEEEe
Q 008820 448 IKVWRNDKFM--KSMQTH------KGSVFAVFL-EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYW 518 (552)
Q Consensus 448 i~iwd~~~~~--~~~~~h------~~~v~~v~~-~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~ 518 (552)
|++||+.... ..+..+ ......... .+..+++++.|+.|++||+.+++....+..+ ...|.+++|+
T Consensus 269 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~-----~~~v~~~~~s 343 (408)
T 4a11_B 269 MRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGH-----YKTVDCCVFQ 343 (408)
T ss_dssp EEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCC-----SSCEEEEEEE
T ss_pred EEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccC-----CCeEEEEEEc
Confidence 9999976432 222111 111122222 4566777788999999999988777665532 6779999999
Q ss_pred CC--eEEEEeCCCeEEEEEecC
Q 008820 519 QG--KLFVGCADRTVKIALCNR 538 (552)
Q Consensus 519 ~~--~l~s~s~Dg~v~iw~~~~ 538 (552)
++ .|++|+.||.|++|+++.
T Consensus 344 ~~~~~l~s~~~dg~i~iw~~~~ 365 (408)
T 4a11_B 344 SNFQELYSGSRDCNILAWVPSL 365 (408)
T ss_dssp TTTTEEEEEETTSCEEEEEECC
T ss_pred CCCCEEEEECCCCeEEEEeCCC
Confidence 63 499999999999999984
No 68
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=9.2e-32 Score=261.41 Aligned_cols=241 Identities=17% Similarity=0.228 Sum_probs=189.3
Q ss_pred EeecCccceEEEEEc--CCEEEEEeCCCcEEEEeCCCCe--EEEEEeCCCCCeEEEEEecC-CCCEEEEEcCCCcEEEEe
Q 008820 247 DLQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFS--HVHTFKGHDHKVMAVVYVDE-DQPLCISGDSGGGIFVWS 321 (552)
Q Consensus 247 ~l~~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~~--~~~~~~~h~~~v~~v~~~~~-~~~~l~s~~~dg~i~vwd 321 (552)
.+.+|.++|++++|+ +++|++|+.|++|+|||+.+++ .+..+.+|.+.|.+++|+++ ++.+|++|+.|++|++||
T Consensus 8 ~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd 87 (316)
T 3bg1_A 8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWR 87 (316)
T ss_dssp ------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEEC
T ss_pred ecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEE
Confidence 367999999999998 9999999999999999998875 46789999999999999864 456889999999999999
Q ss_pred CCCCCCCccccccccCCCceeeeEEEEeeC--CCEEEEeeCCCcEEEEECCCCce---eEEecCCCCCeEEEEEeC----
Q 008820 322 FSFPLGHEPLKKWNEEKDWRYSGIHALTTS--GRYLYTGSGDRTIKAWSLLDGTL---SCTMSGHKSAVSTLAVCN---- 392 (552)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~sgs~dg~i~iwd~~~~~~---~~~~~~h~~~v~~l~~~~---- 392 (552)
++++... ....+..+.. .....+++|+ +.+|++|+.|+.|++||++++.. ...+.+|...|.+++|++
T Consensus 88 ~~~~~~~-~~~~~~~h~~--~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 164 (316)
T 3bg1_A 88 EENGTWE-KSHEHAGHDS--SVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVP 164 (316)
T ss_dssp CSSSCCC-EEEEECCCSS--CCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC
T ss_pred CCCCcce-EEEEccCCCC--ceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCC
Confidence 9865321 2222222322 1224577787 67999999999999999987632 345678999999999983
Q ss_pred ---------------CEEEEEeCCCcEEEEECCCC---ceeEEEecCCCCceEEEEEEcCCC----CEEEEEECCCcEEE
Q 008820 393 ---------------GVLYSGSRDGTIRLWSLSDH---SLLTVLEEDSSGAVSSVLSLTAVQ----HTLVVSHESGSIKV 450 (552)
Q Consensus 393 ---------------~~l~s~~~dg~i~iwd~~~~---~~~~~~~~~~~~~~~~~~~~s~~~----~~l~~g~~dg~i~i 450 (552)
.+|++|+.|++|++||++.. +.+..+..| ...+.+ ++|+|++ .+|++|+.||+|++
T Consensus 165 ~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h-~~~V~~-v~~sp~~~~~~~~las~s~D~~v~i 242 (316)
T 3bg1_A 165 GSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAH-SDWVRD-VAWAPSIGLPTSTIASCSQDGRVFI 242 (316)
T ss_dssp ------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCC-SSCEEE-EECCCCSSCSCCEEEEEETTCEEEE
T ss_pred ccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccC-CCceEE-EEecCCCCCCCceEEEEcCCCeEEE
Confidence 37999999999999999765 345555554 455555 6999986 89999999999999
Q ss_pred EeCCc------ceeeeecccceEEEEEe--cCCEEEEEeCCCeEEEEecC
Q 008820 451 WRNDK------FMKSMQTHKGSVFAVFL--EGKWLFTGGWDKTVSVQELA 492 (552)
Q Consensus 451 wd~~~------~~~~~~~h~~~v~~v~~--~~~~l~sgs~dg~i~iwd~~ 492 (552)
||... ....+..|...|.+++| ++++|++++.|++|++|+..
T Consensus 243 w~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~ 292 (316)
T 3bg1_A 243 WTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKES 292 (316)
T ss_dssp EECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEEEC
T ss_pred EEccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEEC
Confidence 99654 23456778999999987 89999999999999999976
No 69
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=6.8e-31 Score=260.46 Aligned_cols=280 Identities=10% Similarity=0.046 Sum_probs=207.0
Q ss_pred cceEEEEEc--CCEEEEEeCCC-------cEEEEeCCCCeE----------EEEEeCCCCCeEEEEEecCCCCEEEEE--
Q 008820 253 DCVTGLAVG--GGFLFSSSFDK-------SIHVWSLKDFSH----------VHTFKGHDHKVMAVVYVDEDQPLCISG-- 311 (552)
Q Consensus 253 ~~V~~l~~s--~~~l~s~s~dg-------~I~iwd~~~~~~----------~~~~~~h~~~v~~v~~~~~~~~~l~s~-- 311 (552)
-||.+++|+ +++|++|+.|. .|++|++..... ...+.+|...|.++++.. ..+++|
T Consensus 15 ~PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~~---~~~~~g~~ 91 (365)
T 4h5i_A 15 YPAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDASK---GIILVGCN 91 (365)
T ss_dssp SCEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEET---TEEEEECC
T ss_pred CCEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeCC---CEEEEEEC
Confidence 589999999 88999987643 599999875421 234567888999988753 244544
Q ss_pred ---------cCCCcEEEEeCCCCCCCccc----cccccCCCceeeeEEEEeeCCCEEE--EeeCCCcEEEEECCCCceeE
Q 008820 312 ---------DSGGGIFVWSFSFPLGHEPL----KKWNEEKDWRYSGIHALTTSGRYLY--TGSGDRTIKAWSLLDGTLSC 376 (552)
Q Consensus 312 ---------~~dg~i~vwd~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~l~--sgs~dg~i~iwd~~~~~~~~ 376 (552)
+.|+.+++|++......... .............+.+|+|||++++ +++.|++|++||+++++++.
T Consensus 92 ~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~ 171 (365)
T 4h5i_A 92 ENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKF 171 (365)
T ss_dssp CCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEE
T ss_pred CCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEE
Confidence 45788999998765432111 1111111112334678999999765 45578999999999999998
Q ss_pred EecCCCCCeEEEEEe-CC-EEEEEeCCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEECCC----cEEE
Q 008820 377 TMSGHKSAVSTLAVC-NG-VLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESG----SIKV 450 (552)
Q Consensus 377 ~~~~h~~~v~~l~~~-~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg----~i~i 450 (552)
.+. |...|.+++|+ ++ ++++++ ++.+++|+..+++.+..............++|+|++.++++++.|+ .+++
T Consensus 172 ~~~-~~~~V~~v~fspdg~~l~s~s-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~ 249 (365)
T 4h5i_A 172 EIE-TRGEVKDLHFSTDGKVVAYIT-GSSLEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTK 249 (365)
T ss_dssp EEE-CSSCCCEEEECTTSSEEEEEC-SSCEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEE
T ss_pred EeC-CCCceEEEEEccCCceEEecc-ceeEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEee
Confidence 886 77889999999 44 677666 5667788888887665543322233344479999999999999887 5788
Q ss_pred EeCCcc------eeeeecccceEEEEEe--cCCEEEEEeCCCeEEEEecCCCeeeeeeccCCCcccCcceEEEEEeCC--
Q 008820 451 WRNDKF------MKSMQTHKGSVFAVFL--EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQG-- 520 (552)
Q Consensus 451 wd~~~~------~~~~~~h~~~v~~v~~--~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~-- 520 (552)
||.... ...+.+|...|++++| +|++|++|+.|++|+|||+.+++....+... |...|++++|+|+
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~g----H~~~V~~v~fSpdg~ 325 (365)
T 4h5i_A 250 ISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQA----HSFAITEVTISPDST 325 (365)
T ss_dssp EEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETTS----SSSCEEEEEECTTSC
T ss_pred cccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecCc----ccCCEEEEEECCCCC
Confidence 885432 3456789999999887 9999999999999999999998776654321 2678999999963
Q ss_pred eEEEEeCCCeEEEEEecCCcc
Q 008820 521 KLFVGCADRTVKIALCNRQIP 541 (552)
Q Consensus 521 ~l~s~s~Dg~v~iw~~~~~~~ 541 (552)
.|++||.|++|+||+++.+..
T Consensus 326 ~laS~S~D~tvrvw~ip~~~~ 346 (365)
T 4h5i_A 326 YVASVSAANTIHIIKLPLNYA 346 (365)
T ss_dssp EEEEEETTSEEEEEECCTTTT
T ss_pred EEEEEeCCCeEEEEEcCCCCc
Confidence 499999999999999975443
No 70
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=9.7e-30 Score=249.47 Aligned_cols=271 Identities=20% Similarity=0.351 Sum_probs=219.2
Q ss_pred CCCCccccceeeecC-cceEEEeeCCCeEEEEEe--------------ecCccceEEEEEc--CCEEEEEeCCCcEEEEe
Q 008820 216 NSDGADIDQARAAGG-VKDLVNGLSKGNVKFKDL--------------QGHRDCVTGLAVG--GGFLFSSSFDKSIHVWS 278 (552)
Q Consensus 216 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l--------------~~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd 278 (552)
..+...+.++.+++. ++.+++++.|+.+++|++ .+|.+.|++++|+ +++|++|+.|+.|++|+
T Consensus 35 ~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~~ 114 (340)
T 4aow_A 35 KGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWD 114 (340)
T ss_dssp CCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred CCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccccceEEe
Confidence 445566889999886 578899999999999973 5799999999999 89999999999999999
Q ss_pred CCCCeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCccccccccCCCceeeeEEEEeeCC--CEEE
Q 008820 279 LKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSG--RYLY 356 (552)
Q Consensus 279 ~~~~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~l~ 356 (552)
............+...+....+++.+. ++++++.|+.+++||+...... ......+.. .....++++++ ..++
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~s~s~d~~~~~~d~~~~~~~--~~~~~~~~~--~v~~~~~~~~~~~~~~~ 189 (340)
T 4aow_A 115 LTTGTTTRRFVGHTKDVLSVAFSSDNR-QIVSGSRDKTIKLWNTLGVCKY--TVQDESHSE--WVSCVRFSPNSSNPIIV 189 (340)
T ss_dssp TTTTEEEEEEECCSSCEEEEEECTTSS-CEEEEETTSCEEEECTTSCEEE--EECSSSCSS--CEEEEEECSCSSSCEEE
T ss_pred ecccceeeeecCCCCceeEEEEeecCc-cceeecCCCeEEEEEeCCCceE--EEEeccccC--cccceEEccCCCCcEEE
Confidence 999999999999999999999988655 6799999999999998753221 111122221 12234555554 4889
Q ss_pred EeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe--CCEEEEEeCCCcEEEEECCCCceeEEEecCCCCceEEEEEEcC
Q 008820 357 TGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC--NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTA 434 (552)
Q Consensus 357 sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~ 434 (552)
+++.|+.|++||+++++.+..+.+|...|++++|+ +.+|++|+.|++|++||+++.+.+..+..+ ..+.. ++++|
T Consensus 190 s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~--~~v~~-~~~~~ 266 (340)
T 4aow_A 190 SCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGG--DIINA-LCFSP 266 (340)
T ss_dssp EEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECS--SCEEE-EEECS
T ss_pred EEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCC--ceEEe-eecCC
Confidence 99999999999999999999999999999999999 349999999999999999999999888765 33444 68999
Q ss_pred CCCEEEEEECCCcEEEEeCCcc--ee---------eeecccceEEEEEe--cCCEEEEEeCCCeEEEEecCCCe
Q 008820 435 VQHTLVVSHESGSIKVWRNDKF--MK---------SMQTHKGSVFAVFL--EGKWLFTGGWDKTVSVQELAGDE 495 (552)
Q Consensus 435 ~~~~l~~g~~dg~i~iwd~~~~--~~---------~~~~h~~~v~~v~~--~~~~l~sgs~dg~i~iwd~~~~~ 495 (552)
++.++ +++.|+.|++||.... .. ...+|...|++++| ++++|++|+.||.|++||++++.
T Consensus 267 ~~~~~-~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 267 NRYWL-CAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp SSSEE-EEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEEEEEEEC--
T ss_pred CCcee-eccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCCcC
Confidence 87655 5667999999997532 22 23468899999987 89999999999999999998764
No 71
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=3e-30 Score=256.41 Aligned_cols=272 Identities=15% Similarity=0.107 Sum_probs=221.2
Q ss_pred CccccceeeecCcceEEEeeCCCeEEEEE-----------eecCccceEEEEEc--CCEEEEEeCCCcEEEEeCCCCeEE
Q 008820 219 GADIDQARAAGGVKDLVNGLSKGNVKFKD-----------LQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHV 285 (552)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------l~~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~~~~ 285 (552)
...+..+.++++++.++++..++.+.+|+ +.+|...|++++|+ +++|++++.||.|++||+.+++..
T Consensus 8 ~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~ 87 (372)
T 1k8k_C 8 VEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWK 87 (372)
T ss_dssp SSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEE
T ss_pred CCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeee
Confidence 34577888888888888888888887776 45799999999999 899999999999999999988765
Q ss_pred EEE--eCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCc
Q 008820 286 HTF--KGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRT 363 (552)
Q Consensus 286 ~~~--~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~ 363 (552)
..+ ..|...|.+++|+|++ .++++++.|+.|++||++..............+. ......+++++++++++|+.||.
T Consensus 88 ~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~-~~i~~~~~~~~~~~l~~~~~dg~ 165 (372)
T 1k8k_C 88 PTLVILRINRAARCVRWAPNE-KKFAVGSGSRVISICYFEQENDWWVCKHIKKPIR-STVLSLDWHPNSVLLAAGSCDFK 165 (372)
T ss_dssp EEEECCCCSSCEEEEEECTTS-SEEEEEETTSSEEEEEEETTTTEEEEEEECTTCC-SCEEEEEECTTSSEEEEEETTSC
T ss_pred eeEEeecCCCceeEEEECCCC-CEEEEEeCCCEEEEEEecCCCcceeeeeeecccC-CCeeEEEEcCCCCEEEEEcCCCC
Confidence 544 6799999999999965 5889999999999999987653222222222211 12234577888999999999999
Q ss_pred EEEEEC------------------CCCceeEEecCCCCCeEEEEEe--CCEEEEEeCCCcEEEEECCCCceeEEEecCCC
Q 008820 364 IKAWSL------------------LDGTLSCTMSGHKSAVSTLAVC--NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSS 423 (552)
Q Consensus 364 i~iwd~------------------~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~ 423 (552)
|++||+ ..++.+..+.+|...|.+++|+ +.+|++++.|+.|++||+++++.+..+..+.
T Consensus 166 i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~- 244 (372)
T 1k8k_C 166 CRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASET- 244 (372)
T ss_dssp EEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEECSS-
T ss_pred EEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEEccCC-
Confidence 999995 4678888999999999999998 3499999999999999999999999988763
Q ss_pred CceEEEEEEcCCCCEEEEEECCCcEEEEeCCc--ce----------------------------------------eee-
Q 008820 424 GAVSSVLSLTAVQHTLVVSHESGSIKVWRNDK--FM----------------------------------------KSM- 460 (552)
Q Consensus 424 ~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~~--~~----------------------------------------~~~- 460 (552)
..+.. ++|+|++.++++| .|+.|++||... .. ..+
T Consensus 245 ~~v~~-~~~~~~~~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (372)
T 1k8k_C 245 LPLLA-VTFITESSLVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLD 322 (372)
T ss_dssp CCEEE-EEEEETTEEEEEE-TTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC---------CCCS
T ss_pred CCeEE-EEEecCCCEEEEE-eCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhcccccccccCcccccccc
Confidence 34454 6999999988887 999999999654 10 223
Q ss_pred ecccceEEEEEe---cC---CEEEEEeCCCeEEEEecCCCe
Q 008820 461 QTHKGSVFAVFL---EG---KWLFTGGWDKTVSVQELAGDE 495 (552)
Q Consensus 461 ~~h~~~v~~v~~---~~---~~l~sgs~dg~i~iwd~~~~~ 495 (552)
.+|...|.++.+ +| .+|++|+.||.|++||+.+.+
T Consensus 323 ~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~~~~~ 363 (372)
T 1k8k_C 323 SLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRSLE 363 (372)
T ss_dssp SSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHHHHH
T ss_pred ccccCCcceeEEecCCCcceeeEEEecCCCceEEEEecChh
Confidence 489999999974 56 899999999999999997643
No 72
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.8e-30 Score=285.97 Aligned_cols=193 Identities=12% Similarity=0.040 Sum_probs=158.4
Q ss_pred ccccceeeecCcceEEEeeCCCeEEEEEe--------ecCccceEEEEEc-CCEEEEEeCCCcEEEEeCCCCeEEEEEeC
Q 008820 220 ADIDQARAAGGVKDLVNGLSKGNVKFKDL--------QGHRDCVTGLAVG-GGFLFSSSFDKSIHVWSLKDFSHVHTFKG 290 (552)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--------~~H~~~V~~l~~s-~~~l~s~s~dg~I~iwd~~~~~~~~~~~~ 290 (552)
..+.++++++.+..++++..++.+++|+. ..|..+|++++|+ +++|++++.|++|++||+.+++++..+.
T Consensus 18 ~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~~~~~~~V~~l~fspg~~L~S~s~D~~v~lWd~~~~~~~~~~~- 96 (902)
T 2oaj_A 18 SKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIKLEDRSAIKEMRFVKGIYLVVINAKDTVYVLSLYSQKVLTTVF- 96 (902)
T ss_dssp SCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEEECSSCCCEEEEEEETTTEEEEEETTCEEEEEETTTCSEEEEEE-
T ss_pred CCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEEEcCCCCCEEEEEEcCCCEEEEEECcCeEEEEECCCCcEEEEEc-
Confidence 34888999999999999999999999963 3578899999999 8899999999999999999999999887
Q ss_pred CCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCc-cc-------cccccCCCceeeeEEEEeeC-CCEEEEeeCC
Q 008820 291 HDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHE-PL-------KKWNEEKDWRYSGIHALTTS-GRYLYTGSGD 361 (552)
Q Consensus 291 h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~-~~-------~~~~~~~~~~~~~~~~~~~~-~~~l~sgs~d 361 (552)
|.+.|++++|+|++. ++++|+.||+|++||+++..... .+ .....+. ......+|+|+ +..+++|+.|
T Consensus 97 ~~~~V~~v~~sp~g~-~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~--~~V~sl~~sp~~~~~l~~g~~d 173 (902)
T 2oaj_A 97 VPGKITSIDTDASLD-WMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARL--SPIVSIQWNPRDIGTVLISYEY 173 (902)
T ss_dssp CSSCEEEEECCTTCS-EEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCC--CCCCEEEEETTEEEEEEEECSS
T ss_pred CCCCEEEEEECCCCC-EEEEEcCCCcEEEEECCCCccccceeccccccccccccCC--CCeEEEEEccCCCCEEEEEeCC
Confidence 778999999999665 78999999999999998654310 00 1111111 11223467774 4689999999
Q ss_pred CcEEEEECCCCceeEEecCC------------------CCCeEEEEEe-C-CEEEEEeCCCcEEEEECCCCceeEE
Q 008820 362 RTIKAWSLLDGTLSCTMSGH------------------KSAVSTLAVC-N-GVLYSGSRDGTIRLWSLSDHSLLTV 417 (552)
Q Consensus 362 g~i~iwd~~~~~~~~~~~~h------------------~~~v~~l~~~-~-~~l~s~~~dg~i~iwd~~~~~~~~~ 417 (552)
|.| +||+++++++..+..| ...|++++|+ + .+|++++.||+|++||+++++++..
T Consensus 174 g~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~~~~~ 248 (902)
T 2oaj_A 174 VTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANSGHMIMA 248 (902)
T ss_dssp CEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTTCCEEEE
T ss_pred CcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEEE
Confidence 999 9999999999888766 5779999999 3 4999999999999999999887653
No 73
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=6e-30 Score=248.46 Aligned_cols=268 Identities=17% Similarity=0.219 Sum_probs=207.6
Q ss_pred eEEEEEc-CCEEEEEeCCCcEEEEeCCCCeEEEEEe--CCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCccc
Q 008820 255 VTGLAVG-GGFLFSSSFDKSIHVWSLKDFSHVHTFK--GHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPL 331 (552)
Q Consensus 255 V~~l~~s-~~~l~s~s~dg~I~iwd~~~~~~~~~~~--~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~ 331 (552)
.++|+|+ +++|++| .|++|+|||+.++++++.+. +|...|++++|+|++. ++++|+.||+|++||+++++...
T Consensus 28 ~~~l~WS~~~~lAvg-~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~-~l~sgs~Dg~v~iw~~~~~~~~~-- 103 (318)
T 4ggc_A 28 LNLVDWSSGNVLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGN-YLAVGTSSAEVQLWDVQQQKRLR-- 103 (318)
T ss_dssp CBCEEECTTSEEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSS-EEEEEETTSEEEEEETTTTEEEE--
T ss_pred ceEEEECCCCEEEEE-eCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCC-EEEEEECCCcEEEeecCCceeEE--
Confidence 5678999 7777665 59999999999999988775 5778899999999665 78999999999999998765433
Q ss_pred cccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCC-ceeEEecCCCCCeEEEEEe--CCEEEEEeCCCcEEEEE
Q 008820 332 KKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDG-TLSCTMSGHKSAVSTLAVC--NGVLYSGSRDGTIRLWS 408 (552)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~-~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd 408 (552)
....+. ..+.++++++..+++|+.++.+++|+.... ..+..+.+|...+.++.+. +.++++++.|++|++||
T Consensus 104 -~~~~h~----~~~~~~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd 178 (318)
T 4ggc_A 104 -NMTSHS----ARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWP 178 (318)
T ss_dssp -EEECCS----SCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred -EecCcc----ceEEEeecCCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEE
Confidence 333332 245678888999999999999999998865 4567788999999999998 45999999999999999
Q ss_pred CCCCcee----EEEecCCCCceEEEEEEcCCCC-EE--EEEECCCcEEEEeCCcc-eeeeecccceEEEEEe--cCCEEE
Q 008820 409 LSDHSLL----TVLEEDSSGAVSSVLSLTAVQH-TL--VVSHESGSIKVWRNDKF-MKSMQTHKGSVFAVFL--EGKWLF 478 (552)
Q Consensus 409 ~~~~~~~----~~~~~~~~~~~~~~~~~s~~~~-~l--~~g~~dg~i~iwd~~~~-~~~~~~h~~~v~~v~~--~~~~l~ 478 (552)
+++++.. .... .+.+.+.. +.+++++. .+ ++++.++.|++||.... ......+...+..+.+ ++..++
T Consensus 179 ~~~~~~~~~~~~~~~-~~~~~v~~-~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 256 (318)
T 4ggc_A 179 SAPGEGGWVPLQTFT-QHQGAVKA-VAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELI 256 (318)
T ss_dssp SSCBTTBSCCSEEEC-CCCSCEEE-EEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEECSSCEEEEEEETTTTEEE
T ss_pred CCCCcccccceeeec-ccCCceEE-EEecCCCCcEEEEEecCCCCEEEEEecccccccccccceeeeeeeeecccccceE
Confidence 9886532 2222 22344554 46666654 33 35667899999996643 3334456666766665 777776
Q ss_pred EEe--CCCeEEEEecCCCeeeeeeccCCCcccCcceEEEEEeCC--eEEEEeCCCeEEEEEecC
Q 008820 479 TGG--WDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQG--KLFVGCADRTVKIALCNR 538 (552)
Q Consensus 479 sgs--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~--~l~s~s~Dg~v~iw~~~~ 538 (552)
+++ .|+.|++||+.+++....+.. |...|++++|+|+ .|++|+.||+|+|||+..
T Consensus 257 ~~sg~~d~~i~iwd~~~~~~~~~l~g-----H~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~~ 315 (318)
T 4ggc_A 257 SGHGFAQNQLVIWKYPTMAKVAELKG-----HTSRVLSLTMSPDGATVASAAADETLRLWRCFE 315 (318)
T ss_dssp EEECTTTCCEEEEETTTCCEEEEECC-----CSSCEEEEEECTTSSCEEEEETTTEEEEECCSC
T ss_pred EEEEcCCCEEEEEECCCCcEEEEEcC-----CCCCEEEEEEcCCCCEEEEEecCCeEEEEECCC
Confidence 654 799999999999887776654 2678999999963 599999999999999864
No 74
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=5.8e-30 Score=250.50 Aligned_cols=277 Identities=17% Similarity=0.240 Sum_probs=223.3
Q ss_pred CccceEEEEEc--CCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCC
Q 008820 251 HRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGH 328 (552)
Q Consensus 251 H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~ 328 (552)
|.++|.+++|+ |++++++..++.+.+|+...........+|...|.+++|+|++. ++++++ ||.|++||+.++...
T Consensus 8 ~~~~v~~~~~s~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~~~~-dg~i~iw~~~~~~~~ 85 (337)
T 1gxr_A 8 GSKPAYSFHVTADGQMQPVPFPPDALIGPGIPRHARQINTLNHGEVVCAVTISNPTR-HVYTGG-KGCVKVWDISHPGNK 85 (337)
T ss_dssp EEEECCEEEECSSSCEEECCCCTTSSSSTTCCSEEEEEEEECCSSCCCEEEECSSSS-EEEEEC-BSEEEEEETTSTTCC
T ss_pred cCCceeEEEECCCCCEEEeecCCCcEeccccCCccccceeccCCCceEEEEEecCCc-EEEEcC-CCeEEEEECCCCCce
Confidence 56789999999 89999888888887777666555555568999999999999665 677887 999999999987655
Q ss_pred ccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCc--eeEEecCCCCCeEEEEEe--CCEEEEEeCCCcE
Q 008820 329 EPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGT--LSCTMSGHKSAVSTLAVC--NGVLYSGSRDGTI 404 (552)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~--~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i 404 (552)
..+...............+++++++++++++.||.|++||+++++ ....+..|...|.+++|+ ++++++++.||.|
T Consensus 86 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v 165 (337)
T 1gxr_A 86 SPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNI 165 (337)
T ss_dssp SCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred eeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcE
Confidence 555444321122233445788899999999999999999999887 666788899999999999 3499999999999
Q ss_pred EEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEECCCcEEEEeCCcc--eeeeecccceEEEEEe--cCCEEEEE
Q 008820 405 RLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDKF--MKSMQTHKGSVFAVFL--EGKWLFTG 480 (552)
Q Consensus 405 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~~~--~~~~~~h~~~v~~v~~--~~~~l~sg 480 (552)
++||+++++.+..+..+ ...+.. ++++|+++++++++.||.|++||+++. ... ..|...+.++.+ ++++|+++
T Consensus 166 ~~~d~~~~~~~~~~~~~-~~~i~~-~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~-~~~~~~v~~~~~s~~~~~l~~~ 242 (337)
T 1gxr_A 166 AVWDLHNQTLVRQFQGH-TDGASC-IDISNDGTKLWTGGLDNTVRSWDLREGRQLQQ-HDFTSQIFSLGYCPTGEWLAVG 242 (337)
T ss_dssp EEEETTTTEEEEEECCC-SSCEEE-EEECTTSSEEEEEETTSEEEEEETTTTEEEEE-EECSSCEEEEEECTTSSEEEEE
T ss_pred EEEeCCCCceeeeeecc-cCceEE-EEECCCCCEEEEEecCCcEEEEECCCCceEee-ecCCCceEEEEECCCCCEEEEE
Confidence 99999999988888765 344444 699999999999999999999997643 333 346778888876 89999999
Q ss_pred eCCCeEEEEecCCCeeeeeeccCCCcccCcceEEEEEeC--CeEEEEeCCCeEEEEEecC
Q 008820 481 GWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQ--GKLFVGCADRTVKIALCNR 538 (552)
Q Consensus 481 s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~~--~~l~s~s~Dg~v~iw~~~~ 538 (552)
+.|+.|++||+.+.+...... +...|.+++|++ ..|++++.||.|++|+++.
T Consensus 243 ~~~~~i~~~~~~~~~~~~~~~------~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~ 296 (337)
T 1gxr_A 243 MESSNVEVLHVNKPDKYQLHL------HESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPY 296 (337)
T ss_dssp ETTSCEEEEETTSSCEEEECC------CSSCEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred cCCCcEEEEECCCCCeEEEcC------CccceeEEEECCCCCEEEEecCCCcEEEEECCC
Confidence 999999999999876543221 266799999995 3599999999999999984
No 75
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=2e-30 Score=264.63 Aligned_cols=282 Identities=13% Similarity=0.176 Sum_probs=213.0
Q ss_pred cCccceEEEEEc--CCEEEEEeCCCcEEEEeCCCCe-----------EEEEEeCCC------------CCeEEEEEecCC
Q 008820 250 GHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFS-----------HVHTFKGHD------------HKVMAVVYVDED 304 (552)
Q Consensus 250 ~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~~-----------~~~~~~~h~------------~~v~~v~~~~~~ 304 (552)
.|.+.|++++|+ +++|++|+.||.|+|||+.+++ ....+.+|. +.|.+++|+|++
T Consensus 26 ~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~ 105 (447)
T 3dw8_B 26 AEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQK 105 (447)
T ss_dssp CGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCC
T ss_pred cccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCC
Confidence 367899999999 8999999999999999999877 588899998 889999999986
Q ss_pred C-CEEEEEcCCCcEEEEeCCCCCCCcc------------------------------------cccc-ccCCCceeeeEE
Q 008820 305 Q-PLCISGDSGGGIFVWSFSFPLGHEP------------------------------------LKKW-NEEKDWRYSGIH 346 (552)
Q Consensus 305 ~-~~l~s~~~dg~i~vwd~~~~~~~~~------------------------------------~~~~-~~~~~~~~~~~~ 346 (552)
+ ..+++++.|++|++||+........ ...+ ..+. ......
T Consensus 106 ~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~--~~v~~~ 183 (447)
T 3dw8_B 106 NAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHT--YHINSI 183 (447)
T ss_dssp SSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCS--SCCCEE
T ss_pred CcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCC--cceEEE
Confidence 4 5889999999999999875322100 0011 1111 112345
Q ss_pred EEeeCCCEEEEeeCCCcEEEEECCC-CceeE-------EecCCCCCeEEEEEe--C-CEEEEEeCCCcEEEEECCCCce-
Q 008820 347 ALTTSGRYLYTGSGDRTIKAWSLLD-GTLSC-------TMSGHKSAVSTLAVC--N-GVLYSGSRDGTIRLWSLSDHSL- 414 (552)
Q Consensus 347 ~~~~~~~~l~sgs~dg~i~iwd~~~-~~~~~-------~~~~h~~~v~~l~~~--~-~~l~s~~~dg~i~iwd~~~~~~- 414 (552)
++++++++|++| .|+.|++||+++ ++... .+.+|...|++++|+ + .+|++|+.||+|++||+++++.
T Consensus 184 ~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~ 262 (447)
T 3dw8_B 184 SINSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALC 262 (447)
T ss_dssp EECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSS
T ss_pred EEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccc
Confidence 788899999998 799999999984 44444 256899999999999 3 5999999999999999999886
Q ss_pred ---eEEEecCCC-----------CceEEEEEEcCCCCEEEEEECCCcEEEEeCC---cceeeeecccceE----------
Q 008820 415 ---LTVLEEDSS-----------GAVSSVLSLTAVQHTLVVSHESGSIKVWRND---KFMKSMQTHKGSV---------- 467 (552)
Q Consensus 415 ---~~~~~~~~~-----------~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~---~~~~~~~~h~~~v---------- 467 (552)
+..+..+.. ..+.+ ++|+|++++|++++. +.|++||++ +++..+.+|...+
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~-~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 340 (447)
T 3dw8_B 263 DRHSKLFEEPEDPSNRSFFSEIISSISD-VKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYEND 340 (447)
T ss_dssp CTTCEEECCC-----CCHHHHHTTCEEE-EEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTS
T ss_pred cceeeEeccCCCccccccccccCceEEE-EEECCCCCEEEEeeC-CeEEEEeCCCCccccceeecccccccccccccccc
Confidence 677776542 14554 799999999999999 999999964 4677788886422
Q ss_pred -------EEEEecCCEEEEEeCCCeEEEEecCCCeeeeeeccCC---------------------------CcccCcceE
Q 008820 468 -------FAVFLEGKWLFTGGWDKTVSVQELAGDEFEEDVIPTG---------------------------AIPCGSVIT 513 (552)
Q Consensus 468 -------~~v~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~---------------------------~~~~~~~v~ 513 (552)
.++++++++|++|+.||.|++||+.+++......... .......|.
T Consensus 341 ~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 420 (447)
T 3dw8_B 341 CIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDITLEASRENNKPRTVLKPRKVCASGKRKKDEISVDSLDFNKKIL 420 (447)
T ss_dssp GGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEEEEECCSTTCCTTCBCCCCCEECSSCCCTTCEEGGGCCTTSCCC
T ss_pred ccccceEEEECCCCCEEEEeccCCEEEEEEcCCCcceeeeecccccccccccCCccccccCCcccccccccccccCCcee
Confidence 3445599999999999999999999876543221110 112345688
Q ss_pred EEEEeCC--eEEEEeCCCeEEEEEec
Q 008820 514 ALLYWQG--KLFVGCADRTVKIALCN 537 (552)
Q Consensus 514 ~l~~~~~--~l~s~s~Dg~v~iw~~~ 537 (552)
.++|+|+ .|++++.+ .+++|.-+
T Consensus 421 ~~~~~p~~~~la~~~~~-~~~~~~~~ 445 (447)
T 3dw8_B 421 HTAWHPKENIIAVATTN-NLYIFQDK 445 (447)
T ss_dssp EEEECSSSSEEEEECSS-CEEEEECC
T ss_pred EEEECCCCCEEEEEecc-eeeeeccc
Confidence 9999964 46666666 48888744
No 76
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=1.1e-29 Score=257.09 Aligned_cols=268 Identities=17% Similarity=0.265 Sum_probs=210.3
Q ss_pred ceEEEEEc-CCEEEEEeCCCcEEEEeCCCCeEEEEEe--CCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCcc
Q 008820 254 CVTGLAVG-GGFLFSSSFDKSIHVWSLKDFSHVHTFK--GHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEP 330 (552)
Q Consensus 254 ~V~~l~~s-~~~l~s~s~dg~I~iwd~~~~~~~~~~~--~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~ 330 (552)
.++.|+|+ ++.|++|. |++|+|||..+++....+. +|...|++|+|+|++. +|++|+.||+|++||+.+++..
T Consensus 107 y~~~l~wS~~n~lAvgl-d~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~-~lasgs~Dg~v~iWd~~~~~~~-- 182 (420)
T 4gga_A 107 YLNLVDWSSGNVLAVAL-DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGN-YLAVGTSSAEVQLWDVQQQKRL-- 182 (420)
T ss_dssp TCBCEEECTTSEEEEEE-TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSS-EEEEEETTSCEEEEETTTTEEE--
T ss_pred cceeEEECCCCEEEEEe-CCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCC-EEEEEECCCeEEEEEcCCCcEE--
Confidence 46779999 77777765 9999999999999888775 5778899999999665 7899999999999999876433
Q ss_pred ccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCC-ceeEEecCCCCCeEEEEEe--CCEEEEEeCCCcEEEE
Q 008820 331 LKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDG-TLSCTMSGHKSAVSTLAVC--NGVLYSGSRDGTIRLW 407 (552)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~-~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iw 407 (552)
..+..+. ..+.++++++..+++|+.|+.+++||.... ..+..+.+|...+..+.++ +.++++++.|+.+++|
T Consensus 183 -~~~~~h~----~~v~~~s~~~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~ 257 (420)
T 4gga_A 183 -RNMTSHS----ARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVW 257 (420)
T ss_dssp -EEECCCS----SCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred -EEEeCCC----CceEEEeeCCCEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeeccccceEE
Confidence 3333332 346678899999999999999999998864 5567889999999999999 4599999999999999
Q ss_pred ECCCCce----eEEEecCCCCceEEEEEEcCCC-CEEEEE--ECCCcEEEEeCCc--ceeeeecccceEEEEEe--cCCE
Q 008820 408 SLSDHSL----LTVLEEDSSGAVSSVLSLTAVQ-HTLVVS--HESGSIKVWRNDK--FMKSMQTHKGSVFAVFL--EGKW 476 (552)
Q Consensus 408 d~~~~~~----~~~~~~~~~~~~~~~~~~s~~~-~~l~~g--~~dg~i~iwd~~~--~~~~~~~h~~~v~~v~~--~~~~ 476 (552)
|..+++. +.....+ ...+.. ++|+|++ ..++++ +.|++|++||+.+ ....+..|. .+.++.+ +++.
T Consensus 258 ~~~~~~~~~~~~~~~~~~-~~~V~~-~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~~-~v~~~~~~~~~~~ 334 (420)
T 4gga_A 258 PSAPGEGGWVPLQTFTQH-QGAVKA-VAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHS-QVCSILWSPHYKE 334 (420)
T ss_dssp ESSCCSSCSCCSEEECCC-SSCEEE-EEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECSS-CEEEEEEETTTTE
T ss_pred eeccccccceeeeeeccc-CCceee-eeeCCCcccEEEEEeecCCCEEEEEeCCccccceeecccc-ceeeeeecCCCCe
Confidence 9987653 3344333 445555 5777765 555554 4799999999654 455555554 4555554 7888
Q ss_pred EEEEe--CCCeEEEEecCCCeeeeeeccCCCcccCcceEEEEEeCC--eEEEEeCCCeEEEEEecC
Q 008820 477 LFTGG--WDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQG--KLFVGCADRTVKIALCNR 538 (552)
Q Consensus 477 l~sgs--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~--~l~s~s~Dg~v~iw~~~~ 538 (552)
+++++ .|+.|++||+.+++....+..+ ...|++++|+|+ .|+||+.||+|+|||+..
T Consensus 335 lv~~sg~~d~~I~iwd~~~~~~v~~l~gH-----~~~V~~l~~spdg~~l~S~s~D~tvriWdv~~ 395 (420)
T 4gga_A 335 LISGHGFAQNQLVIWKYPTMAKVAELKGH-----TSRVLSLTMSPDGATVASAAADETLRLWRCFE 395 (420)
T ss_dssp EEEEECTTTCCEEEEETTTCCEEEEECCC-----SSCEEEEEECTTSSCEEEEETTTEEEEECCSC
T ss_pred EEEEEecCCCEEEEEECCCCcEEEEEcCC-----CCCEEEEEEcCCCCEEEEEecCCeEEEEECCC
Confidence 87765 7899999999998877666542 678999999963 599999999999999863
No 77
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=3.6e-30 Score=296.06 Aligned_cols=324 Identities=19% Similarity=0.240 Sum_probs=259.3
Q ss_pred CCCccccceeeecCcceEEEeeCCCeEEEEE---------eecCccceEEEEEc----CCEEEEEeCCCcEEEEeCCCCe
Q 008820 217 SDGADIDQARAAGGVKDLVNGLSKGNVKFKD---------LQGHRDCVTGLAVG----GGFLFSSSFDKSIHVWSLKDFS 283 (552)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------l~~H~~~V~~l~~s----~~~l~s~s~dg~I~iwd~~~~~ 283 (552)
.+...+..+.++++++.++++..++.+.+|+ +.+|.+.|++++|+ +.++++|+.|++|++||+.+++
T Consensus 655 ~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~ 734 (1249)
T 3sfz_A 655 AHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKE 734 (1249)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSS
T ss_pred cCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcc
Confidence 3455688899999999999999999999997 46899999999997 4589999999999999999999
Q ss_pred EEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCccccc----------------------c-------
Q 008820 284 HVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKK----------------------W------- 334 (552)
Q Consensus 284 ~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~----------------------~------- 334 (552)
++.++.+|.+.|.+++|+|++. ++++++.||+|++||+.++.....+.. +
T Consensus 735 ~~~~~~~h~~~v~~~~~sp~~~-~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l 813 (1249)
T 3sfz_A 735 CRNTMFGHTNSVNHCRFSPDDE-LLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKI 813 (1249)
T ss_dssp EEEEECCCSSCEEEEEECSSTT-EEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEE
T ss_pred hhheecCCCCCEEEEEEecCCC-EEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEE
Confidence 9999999999999999999665 889999999999999876532211100 0
Q ss_pred ----------------------ccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe-
Q 008820 335 ----------------------NEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC- 391 (552)
Q Consensus 335 ----------------------~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~- 391 (552)
...+. ......+++++++.+++++.||.|++||+.++..+..+.+|...|++++|+
T Consensus 814 ~~~~~~~v~~~d~~~~~~~~~~~~~~~-~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~sp 892 (1249)
T 3sfz_A 814 IVAAKNKVLLFDIHTSGLLAEIHTGHH-STIQYCDFSPYDHLAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSP 892 (1249)
T ss_dssp EEEETTEEEEEETTTCCEEEEEECSSS-SCCCEEEECSSTTEEEEECSSSCEEEEETTTTEEEEEECCCSSCEEEEEECT
T ss_pred EEEcCCcEEEEEecCCCceeEEcCCCC-CceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceeeecCCCccceEEEEECC
Confidence 00000 112245788899999999999999999999999999999999999999999
Q ss_pred -CCEEEEEeCCCcEEEEECCC-----------------------------------------------------------
Q 008820 392 -NGVLYSGSRDGTIRLWSLSD----------------------------------------------------------- 411 (552)
Q Consensus 392 -~~~l~s~~~dg~i~iwd~~~----------------------------------------------------------- 411 (552)
+..+++++.||+|++||+.+
T Consensus 893 dg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~ 972 (1249)
T 3sfz_A 893 DGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPH 972 (1249)
T ss_dssp TSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTT
T ss_pred CCCEEEEEeCCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCC
Confidence 34899999999999998542
Q ss_pred --------------------CceeEEEecCCCCceEEEEEEcCCCCEEEEEECCCcEEEEeCCc-ceeeeecccceEEEE
Q 008820 412 --------------------HSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDK-FMKSMQTHKGSVFAV 470 (552)
Q Consensus 412 --------------------~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~~-~~~~~~~h~~~v~~v 470 (552)
++....+..+ ...+.+ ++|+|+++++++++.||.|++||..+ ....+..|...+.++
T Consensus 973 g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h-~~~v~~-l~~s~dg~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~v~~~ 1050 (1249)
T 3sfz_A 973 LEYVAFGDEDGAIKIIELPNNRVFSSGVGH-KKAVRH-IQFTADGKTLISSSEDSVIQVWNWQTGDYVFLQAHQETVKDF 1050 (1249)
T ss_dssp SSEEEEEETTSCCEEEETTTTSCEEECCCC-SSCCCC-EEECSSSSCEEEECSSSBEEEEETTTTEEECCBCCSSCEEEE
T ss_pred CCEEEEEcCCCCEEEEEcCCCceeeecccC-CCceEE-EEECCCCCEEEEEcCCCEEEEEECCCCceEEEecCCCcEEEE
Confidence 1111122222 233444 68999999999999999999999764 233556899999999
Q ss_pred Ee-cCCEEEEEeCCCeEEEEecCCCeeeeeeccCCCcccCcceEEEEEeCC--eEEEEeCCCeEEEEEecCCcceeEEEe
Q 008820 471 FL-EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQG--KLFVGCADRTVKIALCNRQIPEIFSLL 547 (552)
Q Consensus 471 ~~-~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~--~l~s~s~Dg~v~iw~~~~~~~~~~~~~ 547 (552)
.+ .+..+++++.||.|++||+.+++....+..+ ...|.+++|+++ .+++++.||.|++|++. +...+..+.
T Consensus 1051 ~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~-----~~~v~~~~~s~d~~~l~s~s~d~~v~iwd~~-~~~~~~~l~ 1124 (1249)
T 3sfz_A 1051 RLLQDSRLLSWSFDGTVKVWNVITGRIERDFTCH-----QGTVLSCAISSDATKFSSTSADKTAKIWSFD-LLSPLHELK 1124 (1249)
T ss_dssp EECSSSEEEEEESSSEEEEEETTTTCCCEEEECC-----SSCCCCEEECSSSSSCEEECCSSCCCEECSS-SSSCSBCCC
T ss_pred EEcCCCcEEEEECCCcEEEEECCCCceeEEEccc-----CCcEEEEEECCCCCEEEEEcCCCcEEEEECC-Ccceeeeec
Confidence 88 5678899999999999999988776665432 567899999964 49999999999999997 445566666
Q ss_pred ccc
Q 008820 548 LHI 550 (552)
Q Consensus 548 gh~ 550 (552)
+|.
T Consensus 1125 ~h~ 1127 (1249)
T 3sfz_A 1125 GHN 1127 (1249)
T ss_dssp CCS
T ss_pred cCC
Confidence 665
No 78
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=4.2e-30 Score=252.35 Aligned_cols=275 Identities=16% Similarity=0.138 Sum_probs=220.5
Q ss_pred eecCccceEEEEEc--CCEEEEEeCCCcEEEEeCCCCe---EEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeC
Q 008820 248 LQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFS---HVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSF 322 (552)
Q Consensus 248 l~~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~~---~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~ 322 (552)
..+|.+.|++++|+ +++|++++.|+.|++||+.+++ ....+.+|...|.+++|+|++..++++++.||.|++||+
T Consensus 7 ~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~ 86 (342)
T 1yfq_A 7 EQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDL 86 (342)
T ss_dssp SSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECS
T ss_pred ccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEe
Confidence 46899999999999 8999999999999999998876 345566899999999999974427899999999999999
Q ss_pred -CCCCCCcccccccc--CCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCC---------CceeEEecCCCCCeEEEEE
Q 008820 323 -SFPLGHEPLKKWNE--EKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLD---------GTLSCTMSGHKSAVSTLAV 390 (552)
Q Consensus 323 -~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~---------~~~~~~~~~h~~~v~~l~~ 390 (552)
..... ..+.. +.. . ....++++ ++.+++++.|+.|++||+++ ++++..+. |...|.+++|
T Consensus 87 ~~~~~~----~~~~~~~~~~-~-v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~ 158 (342)
T 1yfq_A 87 IGSPSF----QALTNNEANL-G-ICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VKNKIFTMDT 158 (342)
T ss_dssp SSSSSE----EECBSCCCCS-C-EEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-SCCCEEEEEE
T ss_pred ccCCce----EeccccCCCC-c-eEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-eCCceEEEEe
Confidence 76532 22222 222 1 22346677 88999999999999999987 77777776 8899999999
Q ss_pred eCCEEEEEeCCCcEEEEECCC-Cce-eEEEecCCCCceEEEEEEcC-CCCEEEEEECCCcEEEEeCC--------cceee
Q 008820 391 CNGVLYSGSRDGTIRLWSLSD-HSL-LTVLEEDSSGAVSSVLSLTA-VQHTLVVSHESGSIKVWRND--------KFMKS 459 (552)
Q Consensus 391 ~~~~l~s~~~dg~i~iwd~~~-~~~-~~~~~~~~~~~~~~~~~~s~-~~~~l~~g~~dg~i~iwd~~--------~~~~~ 459 (552)
+++.+++++.|+.|++||+++ +.. .......+...+.+ ++++| +++++++++.||.|++|+.. +....
T Consensus 159 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~-i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~ 237 (342)
T 1yfq_A 159 NSSRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRD-VALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFA 237 (342)
T ss_dssp CSSEEEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEE-EEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEE
T ss_pred cCCcEEEEeCCCeEEEEECCccccccceeeecCCCCceeE-EEECCCCCCEEEEEecCCcEEEEEEcCCCccccccccee
Confidence 977799999999999999998 654 33333344445554 69999 99999999999999999853 55667
Q ss_pred eecccc---------eEEEEEe--cCCEEEEEeCCCeEEEEecCCCeeeeeeccCCCcccCcceEEEEEe-CCeEEEEeC
Q 008820 460 MQTHKG---------SVFAVFL--EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYW-QGKLFVGCA 527 (552)
Q Consensus 460 ~~~h~~---------~v~~v~~--~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~-~~~l~s~s~ 527 (552)
+..|.. .|.++.+ ++++|++++.||.|++||+.+++....+..+ +...|.+++ . +..|++|+.
T Consensus 238 ~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~----h~~~v~~~~-~~~~~l~s~s~ 312 (342)
T 1yfq_A 238 FRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKF----NEDSVVKIA-CSDNILCLATS 312 (342)
T ss_dssp EECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCC----SSSEEEEEE-ECSSEEEEEEE
T ss_pred eecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHhhhhhcc----cCCCceEec-CCCCeEEEEec
Confidence 777765 8999887 8999999999999999999988776654432 156788888 5 456999999
Q ss_pred CCe-EEEEEe
Q 008820 528 DRT-VKIALC 536 (552)
Q Consensus 528 Dg~-v~iw~~ 536 (552)
||. .+.|..
T Consensus 313 Dg~~~~~~~~ 322 (342)
T 1yfq_A 313 DDTFKTNAAI 322 (342)
T ss_dssp CTHHHHCSSS
T ss_pred CCcccccccc
Confidence 999 666664
No 79
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.98 E-value=5.2e-30 Score=253.97 Aligned_cols=281 Identities=12% Similarity=0.116 Sum_probs=221.3
Q ss_pred EEEEeecCccceEEEEEc-C----CEEEEEeCCCcEEEEeCCC-CeEE-EEEeCCCCCeEEEEEecCCCCEEEEEcCCCc
Q 008820 244 KFKDLQGHRDCVTGLAVG-G----GFLFSSSFDKSIHVWSLKD-FSHV-HTFKGHDHKVMAVVYVDEDQPLCISGDSGGG 316 (552)
Q Consensus 244 ~~~~l~~H~~~V~~l~~s-~----~~l~s~s~dg~I~iwd~~~-~~~~-~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~ 316 (552)
.+..+.+|.+.|++++|+ . ++|++|+.||.|++||+.+ +..+ ..+.+|...|.+++|+|++. +|++++.||.
T Consensus 31 ~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~~~dg~ 109 (368)
T 3mmy_A 31 DIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGS-KVFTASCDKT 109 (368)
T ss_dssp CEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSS-EEEEEETTSE
T ss_pred eeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCC-EEEEEcCCCc
Confidence 456789999999999999 3 7999999999999999987 5554 78889999999999999554 7899999999
Q ss_pred EEEEeCCCCCCCccccccccCCCceeeeEEEE--eeCCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEeCCE
Q 008820 317 IFVWSFSFPLGHEPLKKWNEEKDWRYSGIHAL--TTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVCNGV 394 (552)
Q Consensus 317 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~ 394 (552)
|++||+++..... ...+.. .. ...++ ++++++|++++.||.|++||+++++.+..+..+. .+.++.+....
T Consensus 110 v~iwd~~~~~~~~----~~~~~~-~v-~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~-~~~~~~~~~~~ 182 (368)
T 3mmy_A 110 AKMWDLSSNQAIQ----IAQHDA-PV-KTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPE-RCYCADVIYPM 182 (368)
T ss_dssp EEEEETTTTEEEE----EEECSS-CE-EEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSS-CEEEEEEETTE
T ss_pred EEEEEcCCCCcee----eccccC-ce-EEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCC-CceEEEecCCe
Confidence 9999998764322 122222 12 22345 6778899999999999999999999999988665 67888888889
Q ss_pred EEEEeCCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCE----EEEEECCCcEEEEeCCc-----ceeeeecccc
Q 008820 395 LYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHT----LVVSHESGSIKVWRNDK-----FMKSMQTHKG 465 (552)
Q Consensus 395 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~----l~~g~~dg~i~iwd~~~-----~~~~~~~h~~ 465 (552)
+++++.|+.+++||++..................++.+.++... +++++.||.|++||... ....+.+|..
T Consensus 183 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~ 262 (368)
T 3mmy_A 183 AVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRS 262 (368)
T ss_dssp EEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEE
T ss_pred eEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeec
Confidence 99999999999999988765444333222233333555555443 99999999999999763 4567777776
Q ss_pred ------------eEEEEEe--cCCEEEEEeCCCeEEEEecCCCeeeeeeccCCCcccCcceEEEEEeCC--eEEEEeCCC
Q 008820 466 ------------SVFAVFL--EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQG--KLFVGCADR 529 (552)
Q Consensus 466 ------------~v~~v~~--~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~--~l~s~s~Dg 529 (552)
.|.++.+ ++++|++++.||.|++||+.+++....+.. +...|.+++|+++ .|++|+.|+
T Consensus 263 ~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~-----~~~~v~~~~~s~~g~~l~~~s~d~ 337 (368)
T 3mmy_A 263 NGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQ-----LDQPISACCFNHNGNIFAYASSYD 337 (368)
T ss_dssp C----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCC-----CSSCEEEEEECTTSSCEEEEECCC
T ss_pred ccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEecC-----CCCCceEEEECCCCCeEEEEeccc
Confidence 6988887 889999999999999999998877665543 2667999999963 499999998
Q ss_pred eEEEEEec
Q 008820 530 TVKIALCN 537 (552)
Q Consensus 530 ~v~iw~~~ 537 (552)
..+.|++.
T Consensus 338 ~~~~~~~~ 345 (368)
T 3mmy_A 338 WSKGHEFY 345 (368)
T ss_dssp STTCGGGC
T ss_pred cccccccc
Confidence 76666654
No 80
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.98 E-value=1.5e-29 Score=269.00 Aligned_cols=300 Identities=16% Similarity=0.152 Sum_probs=241.5
Q ss_pred ccccceeeecCcceEEEeeCCCeEEEEE-------------eecCccc-eEEEEEc----CCEEEEEeCCCcEEEEeCCC
Q 008820 220 ADIDQARAAGGVKDLVNGLSKGNVKFKD-------------LQGHRDC-VTGLAVG----GGFLFSSSFDKSIHVWSLKD 281 (552)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------l~~H~~~-V~~l~~s----~~~l~s~s~dg~I~iwd~~~ 281 (552)
..+..+.++++++.++++. ++.+.+|+ +.+|.+. |++++|+ +++|++|+.||+|++||+.+
T Consensus 19 ~~v~~~~~spdg~~l~~~~-~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~ 97 (615)
T 1pgu_A 19 NFTTHLSYDPTTNAIAYPC-GKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTF 97 (615)
T ss_dssp TCCCCCEEETTTTEEEEEE-TTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEE
T ss_pred CceeEEEECCCCCEEEEec-CCeEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEEeCCC
Confidence 4466777788777777766 56666665 4568999 9999997 58999999999999999975
Q ss_pred C--------eEEEEEeCCCCCeEEEEEecCCCCEEEEEcCC----CcEEEEeCCCCCCCccccccccCCCceeeeEEEEe
Q 008820 282 F--------SHVHTFKGHDHKVMAVVYVDEDQPLCISGDSG----GGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALT 349 (552)
Q Consensus 282 ~--------~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~d----g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (552)
+ +....+..|...|.+++|+|++. ++++++.+ +.|++||.. . ....+..+.. .....+++
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~~~~~~~~v~~~d~~--~---~~~~~~~~~~--~v~~~~~~ 169 (615)
T 1pgu_A 98 DKESNSVEVNVKSEFQVLAGPISDISWDFEGR-RLCVVGEGRDNFGVFISWDSG--N---SLGEVSGHSQ--RINACHLK 169 (615)
T ss_dssp EGGGTEEEEEEEEEEECCSSCEEEEEECTTSS-EEEEEECCSSCSEEEEETTTC--C---EEEECCSCSS--CEEEEEEC
T ss_pred CcccccccccccchhhcccccEEEEEEeCCCC-EEEEeccCCCCccEEEEEECC--C---cceeeecCCc--cEEEEEEC
Confidence 4 77788899999999999999766 66777766 688888832 2 2333333332 22345788
Q ss_pred eCCC-EEEEeeCCCcEEEEECCCCceeEEecCCCC---CeEEEEEe-C-C-EEEEEeCCCcEEEEECCCCceeEEEec--
Q 008820 350 TSGR-YLYTGSGDRTIKAWSLLDGTLSCTMSGHKS---AVSTLAVC-N-G-VLYSGSRDGTIRLWSLSDHSLLTVLEE-- 420 (552)
Q Consensus 350 ~~~~-~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~---~v~~l~~~-~-~-~l~s~~~dg~i~iwd~~~~~~~~~~~~-- 420 (552)
++++ .+++++.|+.|++||+.+++.+..+.+|.. .|++++|+ + + ++++++.|+.|++||+++++.+..+..
T Consensus 170 ~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~ 249 (615)
T 1pgu_A 170 QSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQ 249 (615)
T ss_dssp SSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTT
T ss_pred CCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEeEEecccc
Confidence 8887 899999999999999999999999999999 99999999 4 4 899999999999999999999988833
Q ss_pred -CCCCceEEEEEEcCCCCEEEEEECCCcEEEEeCC--cceeeeecc----cceEEEEEe-cCCEEEEEeCCCeEEEEecC
Q 008820 421 -DSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRND--KFMKSMQTH----KGSVFAVFL-EGKWLFTGGWDKTVSVQELA 492 (552)
Q Consensus 421 -~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~--~~~~~~~~h----~~~v~~v~~-~~~~l~sgs~dg~i~iwd~~ 492 (552)
.+...+.. +.|+ +++++++++.||.|++||.. +....+..+ ...+.++.+ ++.++++++.||.|++||+.
T Consensus 250 ~~~~~~v~~-~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~d~~ 327 (615)
T 1pgu_A 250 EPVQGGIFA-LSWL-DSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYELG 327 (615)
T ss_dssp BCCCSCEEE-EEES-SSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEEETTEEEEEETTSCEEEEETT
T ss_pred cccCCceEE-EEEc-CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeCCCCeEEEEECCCCEEEEECC
Confidence 44555655 6888 99999999999999999975 455566655 456777766 99999999999999999999
Q ss_pred CCeeeeeeccCCCcccCcceEEEEEeCCeEEEEeCCCeEEEEEec
Q 008820 493 GDEFEEDVIPTGAIPCGSVITALLYWQGKLFVGCADRTVKIALCN 537 (552)
Q Consensus 493 ~~~~~~~~~~~~~~~~~~~v~~l~~~~~~l~s~s~Dg~v~iw~~~ 537 (552)
+++....+.. +...|.+++| ++ +++++.||.|++|++.
T Consensus 328 ~~~~~~~~~~-----~~~~v~~~~~-~~-l~~~~~dg~i~~w~~~ 365 (615)
T 1pgu_A 328 HDEVLKTISG-----HNKGITALTV-NP-LISGSYDGRIMEWSSS 365 (615)
T ss_dssp EEEEEEEECC-----CSSCEEEEET-TT-TEEEETTSCEEETTTT
T ss_pred CCcEEEEEeC-----CCCCEEEEEe-cC-cEEECCCCeEEEEEch
Confidence 8766555443 2667889999 88 8889999999999875
No 81
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.98 E-value=3.9e-31 Score=267.10 Aligned_cols=279 Identities=15% Similarity=0.204 Sum_probs=223.8
Q ss_pred ccceEEEEEc--CC-EEEEE----------eCCCcEEEEeCCCCe---EEEEEeCCCCCeEEEEEecCCCCEEEEEcCCC
Q 008820 252 RDCVTGLAVG--GG-FLFSS----------SFDKSIHVWSLKDFS---HVHTFKGHDHKVMAVVYVDEDQPLCISGDSGG 315 (552)
Q Consensus 252 ~~~V~~l~~s--~~-~l~s~----------s~dg~I~iwd~~~~~---~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg 315 (552)
...|.+++|+ ++ ++++| +.|+.|++||+.++. .+..+ .|...|.+++|+|++. +|++++.||
T Consensus 12 ~~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~-~l~~~~~dg 89 (416)
T 2pm9_A 12 FSRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASL-QVDSKFNDLDWSHNNK-IIAGALDNG 89 (416)
T ss_dssp EEESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCC-CCSSCEEEEEECSSSS-CEEEEESSS
T ss_pred hhhcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEE-ecCCceEEEEECCCCC-eEEEEccCC
Confidence 3578899998 55 99999 899999999998875 33333 5889999999999765 679999999
Q ss_pred cEEEEeCCCCCCC-ccccccccCCCceeeeEEEEeeC-CCEEEEeeCCCcEEEEECCCCc------eeEE---ecCCCCC
Q 008820 316 GIFVWSFSFPLGH-EPLKKWNEEKDWRYSGIHALTTS-GRYLYTGSGDRTIKAWSLLDGT------LSCT---MSGHKSA 384 (552)
Q Consensus 316 ~i~vwd~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~l~sgs~dg~i~iwd~~~~~------~~~~---~~~h~~~ 384 (552)
.|++||+...... .....+..+.. .....+++++ +++|++++.||.|++||+++++ .... +..|...
T Consensus 90 ~v~vw~~~~~~~~~~~~~~~~~h~~--~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (416)
T 2pm9_A 90 SLELYSTNEANNAINSMARFSNHSS--SVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDE 167 (416)
T ss_dssp CEEEECCSSTTSCCCEEEECCCSSS--CCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCC
T ss_pred eEEEeecccccccccchhhccCCcc--ceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCC
Confidence 9999999873222 23333333332 2234577887 7899999999999999999876 3333 3679999
Q ss_pred eEEEEEe-C--CEEEEEeCCCcEEEEECCCCceeEEEecCC-----CCceEEEEEEcCCC-CEEEEEECCC---cEEEEe
Q 008820 385 VSTLAVC-N--GVLYSGSRDGTIRLWSLSDHSLLTVLEEDS-----SGAVSSVLSLTAVQ-HTLVVSHESG---SIKVWR 452 (552)
Q Consensus 385 v~~l~~~-~--~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-----~~~~~~~~~~s~~~-~~l~~g~~dg---~i~iwd 452 (552)
|.+++|+ + .++++++.|+.|++||+++++.+..+..+. ...+.+ ++|+|++ .++++++.|+ .|++||
T Consensus 168 v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~-~~~~~~~~~~l~~~~~d~~~~~i~~~d 246 (416)
T 2pm9_A 168 VISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSV-VEWHPKNSTRVATATGSDNDPSILIWD 246 (416)
T ss_dssp CCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEE-EEECSSCTTEEEEEECCSSSCCCCEEE
T ss_pred eeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEE-EEECCCCCCEEEEEECCCCCceEEEEe
Confidence 9999999 3 389999999999999999999988887653 344554 6999997 6899999998 999999
Q ss_pred CCc---ceeeee-cccceEEEEEe---cCCEEEEEeCCCeEEEEecCCCeeeeeeccCCCcccCcceEEEEEeC---CeE
Q 008820 453 NDK---FMKSMQ-THKGSVFAVFL---EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQ---GKL 522 (552)
Q Consensus 453 ~~~---~~~~~~-~h~~~v~~v~~---~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~~---~~l 522 (552)
++. +...+. +|...|.++.| ++++|++++.||.|++||+.+++....+..+ ...|.+++|++ ..|
T Consensus 247 ~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~-----~~~v~~~~~s~~~~~~l 321 (416)
T 2pm9_A 247 LRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPAR-----GNWCFKTKFAPEAPDLF 321 (416)
T ss_dssp TTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECS-----SSCCCCEEECTTCTTEE
T ss_pred CCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCC-----CCceEEEEECCCCCCEE
Confidence 753 566777 89999999987 7899999999999999999988776655432 56789999995 359
Q ss_pred EEEeCCCeEEEEEecCCc
Q 008820 523 FVGCADRTVKIALCNRQI 540 (552)
Q Consensus 523 ~s~s~Dg~v~iw~~~~~~ 540 (552)
++++.||.|++|++....
T Consensus 322 ~s~~~d~~i~iw~~~~~~ 339 (416)
T 2pm9_A 322 ACASFDNKIEVQTLQNLT 339 (416)
T ss_dssp EECCSSSEEEEEESCCCC
T ss_pred EEEecCCcEEEEEccCCC
Confidence 999999999999997433
No 82
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.98 E-value=4.6e-30 Score=253.49 Aligned_cols=274 Identities=16% Similarity=0.262 Sum_probs=214.3
Q ss_pred CccccceeeecCcceEE-EeeC---CCeEEEEEee----------cCccceEEEEEc-C----CEEEEEeCCCcEEEEeC
Q 008820 219 GADIDQARAAGGVKDLV-NGLS---KGNVKFKDLQ----------GHRDCVTGLAVG-G----GFLFSSSFDKSIHVWSL 279 (552)
Q Consensus 219 ~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~l~----------~H~~~V~~l~~s-~----~~l~s~s~dg~I~iwd~ 279 (552)
...+..+.+++.+..++ ++.. ++.+.+|++. +|.++|++++|+ . ++|++|+.||.|++||+
T Consensus 18 ~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~ 97 (357)
T 3i2n_A 18 NYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNL 97 (357)
T ss_dssp SSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTSCEEEECT
T ss_pred CCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeC
Confidence 34577888888776554 4444 7888888743 688999999998 3 89999999999999999
Q ss_pred CCCe-EEEEEeCCCCCeEEEEEec-----CCCCEEEEEcCCCcEEEEeCCCCC-CCccccccccCCCceeeeEE---EEe
Q 008820 280 KDFS-HVHTFKGHDHKVMAVVYVD-----EDQPLCISGDSGGGIFVWSFSFPL-GHEPLKKWNEEKDWRYSGIH---ALT 349 (552)
Q Consensus 280 ~~~~-~~~~~~~h~~~v~~v~~~~-----~~~~~l~s~~~dg~i~vwd~~~~~-~~~~~~~~~~~~~~~~~~~~---~~~ 349 (552)
.+++ .+..+.+|...|.++.|.+ .++.++++++.||.|++||+.++. ....+.....+.......+. +++
T Consensus 98 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 177 (357)
T 3i2n_A 98 EAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYN 177 (357)
T ss_dssp TSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC
T ss_pred CCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccC
Confidence 9988 8899999999999997653 245588999999999999998765 23333222222121222221 156
Q ss_pred eCCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEeC-----CEEEEEeCCCcEEEEECCCCceeEEEe-----
Q 008820 350 TSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVCN-----GVLYSGSRDGTIRLWSLSDHSLLTVLE----- 419 (552)
Q Consensus 350 ~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~-----~~l~s~~~dg~i~iwd~~~~~~~~~~~----- 419 (552)
++++++++++.||.|++||+++++.... ..|...|.+++|++ +.+++++.||.|++||+++++....+.
T Consensus 178 ~~~~~l~~~~~d~~i~i~d~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~ 256 (357)
T 3i2n_A 178 QEERVVCAGYDNGDIKLFDLRNMALRWE-TNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEK 256 (357)
T ss_dssp -CCCEEEEEETTSEEEEEETTTTEEEEE-EECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEE
T ss_pred CCCCEEEEEccCCeEEEEECccCceeee-cCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccC
Confidence 8899999999999999999999887554 55889999999984 499999999999999998876554443
Q ss_pred cCCCCceEEEEEEcCCCC-EEEEEECCCcEEEEeCC---------------------cceeeeecccceEEEEEe--cCC
Q 008820 420 EDSSGAVSSVLSLTAVQH-TLVVSHESGSIKVWRND---------------------KFMKSMQTHKGSVFAVFL--EGK 475 (552)
Q Consensus 420 ~~~~~~~~~~~~~s~~~~-~l~~g~~dg~i~iwd~~---------------------~~~~~~~~h~~~v~~v~~--~~~ 475 (552)
.+ ...+.. +.|+|+++ ++++|+.||.|++||+. +.+..+.+|...|.++.| +++
T Consensus 257 ~~-~~~v~~-~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~ 334 (357)
T 3i2n_A 257 AH-KSTVWQ-VRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKR 334 (357)
T ss_dssp CC-SSCEEE-EEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSST
T ss_pred CC-cCCEEE-EEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCC
Confidence 33 455555 69999998 89999999999999965 246678889999999987 788
Q ss_pred EEE-EEeCCCeEEEEecCCCe
Q 008820 476 WLF-TGGWDKTVSVQELAGDE 495 (552)
Q Consensus 476 ~l~-sgs~dg~i~iwd~~~~~ 495 (552)
+|+ +++.||.|++||+.+.+
T Consensus 335 ~l~~s~~~d~~i~iw~~~~~~ 355 (357)
T 3i2n_A 335 GLCVCSSFDQTVRVLIVTKLN 355 (357)
T ss_dssp TEEEEEETTSEEEEEEECC--
T ss_pred eEEEEecCCCcEEEEECCCcc
Confidence 887 89999999999998653
No 83
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.98 E-value=9.6e-30 Score=255.32 Aligned_cols=273 Identities=17% Similarity=0.198 Sum_probs=220.8
Q ss_pred CCccccceeeecCcceEEEeeCCCeEEEEEe---------------ecCccceEEEEEc-C--------CEEEEEeCCCc
Q 008820 218 DGADIDQARAAGGVKDLVNGLSKGNVKFKDL---------------QGHRDCVTGLAVG-G--------GFLFSSSFDKS 273 (552)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l---------------~~H~~~V~~l~~s-~--------~~l~s~s~dg~ 273 (552)
+...+..+.+.+ ..++++..++.+.+|++ .+|..+|++++|+ . ++|++++.||.
T Consensus 15 h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~ 92 (397)
T 1sq9_A 15 HDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGD 92 (397)
T ss_dssp SSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEETTSC
T ss_pred hhcCeEEEEecC--CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEEEEcCCCC
Confidence 344577777766 78889999999988874 4688999999998 4 79999999999
Q ss_pred EEEEeCCCCeE-----EEEEeCC-----CCCeEEEEEe----cCCCCEEEEEcCCCcEEEEeCCC------CCCCcccc-
Q 008820 274 IHVWSLKDFSH-----VHTFKGH-----DHKVMAVVYV----DEDQPLCISGDSGGGIFVWSFSF------PLGHEPLK- 332 (552)
Q Consensus 274 I~iwd~~~~~~-----~~~~~~h-----~~~v~~v~~~----~~~~~~l~s~~~dg~i~vwd~~~------~~~~~~~~- 332 (552)
|++||+.+++. ...+..| ...|.+++|+ |++...+++++.||.|++||+.. ........
T Consensus 93 i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~ 172 (397)
T 1sq9_A 93 LLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPT 172 (397)
T ss_dssp EEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCE
T ss_pred EEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccceeeccCc
Confidence 99999998887 8889888 5999999999 86664389999999999999987 43332000
Q ss_pred -cccc-----CCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCceeEEecC---C---CCCeEEEEEe--CCEEEEE
Q 008820 333 -KWNE-----EKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSG---H---KSAVSTLAVC--NGVLYSG 398 (552)
Q Consensus 333 -~~~~-----~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~---h---~~~v~~l~~~--~~~l~s~ 398 (552)
.+.. ..........++++++ .+++|+.||.|++||+++++.+..+.. | ...|.+++|+ +.+|+++
T Consensus 173 ~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~ 251 (397)
T 1sq9_A 173 LELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIA 251 (397)
T ss_dssp EEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEE
T ss_pred ceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEE
Confidence 1111 1111223345788889 999999999999999999999999998 9 9999999999 4499999
Q ss_pred eCC---CcEEEEECCCCceeEEEecC------------CCCceEEEEEEcCCCCEEEEEECCCcEEEEeCC--cceeeee
Q 008820 399 SRD---GTIRLWSLSDHSLLTVLEED------------SSGAVSSVLSLTAVQHTLVVSHESGSIKVWRND--KFMKSMQ 461 (552)
Q Consensus 399 ~~d---g~i~iwd~~~~~~~~~~~~~------------~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~--~~~~~~~ 461 (552)
+.| +.|++||+++++.+..+... +...+.. ++|+|++++|++++.||.|++||+. +.+..+.
T Consensus 252 ~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 330 (397)
T 1sq9_A 252 HDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMS-LSFNDSGETLCSAGWDGKLRFWDVKTKERITTLN 330 (397)
T ss_dssp EEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEE-EEECSSSSEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred ecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEE-EEECCCCCEEEEEeCCCeEEEEEcCCCceeEEEe
Confidence 999 99999999999999888761 2445555 6999999999999999999999965 4667777
Q ss_pred ------cc---------------cceEEEEEe--cC----------CEEEEEeCCCeEEEEecCCC
Q 008820 462 ------TH---------------KGSVFAVFL--EG----------KWLFTGGWDKTVSVQELAGD 494 (552)
Q Consensus 462 ------~h---------------~~~v~~v~~--~~----------~~l~sgs~dg~i~iwd~~~~ 494 (552)
+| ...|.++.| ++ ++|++++.||.|++||+.++
T Consensus 331 ~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~g 396 (397)
T 1sq9_A 331 MHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAGG 396 (397)
T ss_dssp CCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC-
T ss_pred cccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEEcCCC
Confidence 77 899999987 66 69999999999999999875
No 84
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.98 E-value=6.3e-29 Score=251.52 Aligned_cols=263 Identities=17% Similarity=0.326 Sum_probs=212.2
Q ss_pred cccceeeecCcceEEEeeCCCeEEEEE-----------eecCccceEEEEEc--CCEEEEEeCCCcEEEEeCCCCeEEEE
Q 008820 221 DIDQARAAGGVKDLVNGLSKGNVKFKD-----------LQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHT 287 (552)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------l~~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~~~~~~ 287 (552)
.++.+..+.. +.++.+. ++.+++|+ +.+|.+.|++++|+ |++|++|+.||+|+|||+.+++.+..
T Consensus 107 y~~~l~wS~~-n~lAvgl-d~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~ 184 (420)
T 4gga_A 107 YLNLVDWSSG-NVLAVAL-DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRN 184 (420)
T ss_dssp TCBCEEECTT-SEEEEEE-TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEE
T ss_pred cceeEEECCC-CEEEEEe-CCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEE
Confidence 3455555543 3455544 67777776 35788999999999 89999999999999999999999999
Q ss_pred EeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEE
Q 008820 288 FKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAW 367 (552)
Q Consensus 288 ~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iw 367 (552)
+.+|...+.++++. +.++++|+.|+.+++||...... .+..+..+.. ......+.++++++++++.|+.+++|
T Consensus 185 ~~~h~~~v~~~s~~---~~~l~sgs~d~~i~~~d~~~~~~--~~~~~~~h~~--~~~~~~~~~~g~~l~s~~~D~~v~i~ 257 (420)
T 4gga_A 185 MTSHSARVGSLSWN---SYILSSGSRSGHIHHHDVRVAEH--HVATLSGHSQ--EVCGLRWAPDGRHLASGGNDNLVNVW 257 (420)
T ss_dssp ECCCSSCEEEEEEE---TTEEEEEETTSEEEEEETTSSSC--EEEEEECCSS--CEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred EeCCCCceEEEeeC---CCEEEEEeCCCceeEeeecccce--eeEEeccccc--ceeeeeecCCCCeeeeeeccccceEE
Confidence 99999999999885 35899999999999999875432 2233333332 22345778899999999999999999
Q ss_pred ECCCCc----eeEEecCCCCCeEEEEEe---CCEEEE--EeCCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCE
Q 008820 368 SLLDGT----LSCTMSGHKSAVSTLAVC---NGVLYS--GSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHT 438 (552)
Q Consensus 368 d~~~~~----~~~~~~~h~~~v~~l~~~---~~~l~s--~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ 438 (552)
|..+++ .+.....|...|.+++|+ .+.+++ |+.|++|++||++++++...+..+. .+.. +.++++++.
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~~--~v~~-~~~~~~~~~ 334 (420)
T 4gga_A 258 PSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHS--QVCS-ILWSPHYKE 334 (420)
T ss_dssp ESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECSS--CEEE-EEEETTTTE
T ss_pred eeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeecccc--ceee-eeecCCCCe
Confidence 998765 356678899999999998 236655 4579999999999999998887653 3444 688999998
Q ss_pred EEEEE--CCCcEEEEeCC--cceeeeecccceEEEEEe--cCCEEEEEeCCCeEEEEecCCCe
Q 008820 439 LVVSH--ESGSIKVWRND--KFMKSMQTHKGSVFAVFL--EGKWLFTGGWDKTVSVQELAGDE 495 (552)
Q Consensus 439 l~~g~--~dg~i~iwd~~--~~~~~~~~h~~~v~~v~~--~~~~l~sgs~dg~i~iwd~~~~~ 495 (552)
+++++ .|+.|++||.. +++..+.+|.+.|.+++| +|++|+||+.|++|++||+.+..
T Consensus 335 lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv~~~~ 397 (420)
T 4gga_A 335 LISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFELD 397 (420)
T ss_dssp EEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCSS
T ss_pred EEEEEecCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCCC
Confidence 88876 68999999964 578889999999999987 89999999999999999997643
No 85
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.97 E-value=1.3e-29 Score=243.99 Aligned_cols=247 Identities=13% Similarity=0.145 Sum_probs=188.3
Q ss_pred EEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCccccccccCCCceeeeEEEEee--CCCEEEEeeCCCc
Q 008820 286 HTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTT--SGRYLYTGSGDRT 363 (552)
Q Consensus 286 ~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~sgs~dg~ 363 (552)
..+.+|.+.|.+++|+|++. +|++|+.|++|++||+.... ...+..+..|... .. ..+|++ ++++|++|+.|++
T Consensus 3 ~~~~~h~~~V~~~~~s~~g~-~las~s~D~~v~iw~~~~~~-~~~~~~l~gH~~~-V~-~v~~s~~~~g~~l~s~s~D~~ 78 (297)
T 2pm7_B 3 VIANAHNEMIHDAVMDYYGK-RMATCSSDKTIKIFEVEGET-HKLIDTLTGHEGP-VW-RVDWAHPKFGTILASCSYDGK 78 (297)
T ss_dssp EECCSCSSCEEEEEECTTSS-EEEEEETTSCEEEEEBCSSC-BCCCEEECCCSSC-EE-EEEECCGGGCSEEEEEETTTE
T ss_pred eeccCCcCceEEEEECCCCC-EEEEEeCCCEEEEEecCCCC-cEEEEEEccccCC-eE-EEEecCCCcCCEEEEEcCCCE
Confidence 35678999999999999765 78999999999999997432 1233444444432 11 234544 3789999999999
Q ss_pred EEEEECCCCc--eeEEecCCCCCeEEEEEeC----CEEEEEeCCCcEEEEECCCCce--eEEEecCCCCceEEEEEEcCC
Q 008820 364 IKAWSLLDGT--LSCTMSGHKSAVSTLAVCN----GVLYSGSRDGTIRLWSLSDHSL--LTVLEEDSSGAVSSVLSLTAV 435 (552)
Q Consensus 364 i~iwd~~~~~--~~~~~~~h~~~v~~l~~~~----~~l~s~~~dg~i~iwd~~~~~~--~~~~~~~~~~~~~~~~~~s~~ 435 (552)
|++||+++++ .+..+.+|...|.+++|++ .+|++++.|++|++||++++.. ...+..+ ...+.+ ++|+|+
T Consensus 79 v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h-~~~v~~-~~~~p~ 156 (297)
T 2pm7_B 79 VMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAH-AIGVNS-ASWAPA 156 (297)
T ss_dssp EEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECC-SSCEEE-EEECCC
T ss_pred EEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecc-cCccce-EeecCC
Confidence 9999998874 5667888999999999983 3899999999999999987642 3444444 444555 688886
Q ss_pred -------------CCEEEEEECCCcEEEEeCCc------ceeeeecccceEEEEEe--c---CCEEEEEeCCCeEEEEec
Q 008820 436 -------------QHTLVVSHESGSIKVWRNDK------FMKSMQTHKGSVFAVFL--E---GKWLFTGGWDKTVSVQEL 491 (552)
Q Consensus 436 -------------~~~l~~g~~dg~i~iwd~~~------~~~~~~~h~~~v~~v~~--~---~~~l~sgs~dg~i~iwd~ 491 (552)
+++|++|+.|++|++||.+. ....+.+|...|.++.| + +.+|++++.|++|++||+
T Consensus 157 ~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~ 236 (297)
T 2pm7_B 157 TIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQ 236 (297)
T ss_dssp C------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEE
T ss_pred cccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEe
Confidence 57999999999999999643 45678899999999998 4 479999999999999999
Q ss_pred CCCee--eeeeccCCCcccCcceEEEEEeC--CeEEEEeCCCeEEEEEecCCc
Q 008820 492 AGDEF--EEDVIPTGAIPCGSVITALLYWQ--GKLFVGCADRTVKIALCNRQI 540 (552)
Q Consensus 492 ~~~~~--~~~~~~~~~~~~~~~v~~l~~~~--~~l~s~s~Dg~v~iw~~~~~~ 540 (552)
++... ...... ...+...|.+++|++ ..|++++.||.|++|+.+..+
T Consensus 237 ~~~~~~~~~~~~~--~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~~~g 287 (297)
T 2pm7_B 237 DNEQGPWKKTLLK--EEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLEG 287 (297)
T ss_dssp SSTTSCCEEEESS--SSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEECTTS
T ss_pred CCCCCccceeeee--cccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEECCCC
Confidence 86421 111111 112356799999995 359999999999999987543
No 86
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.97 E-value=2.8e-29 Score=252.50 Aligned_cols=259 Identities=17% Similarity=0.293 Sum_probs=211.4
Q ss_pred cceEEEeeCCCeEEEEEee----------cCccceEEEEEc--CCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEE
Q 008820 231 VKDLVNGLSKGNVKFKDLQ----------GHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAV 298 (552)
Q Consensus 231 ~~~~~~~~~~~~~~~~~l~----------~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~~~~~~~~~h~~~v~~v 298 (552)
...++++..++.+.+|++. .|.+.|++++|+ +++|++|+.||.|++||+.+++.+..+.+|...|.++
T Consensus 103 ~~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~ 182 (401)
T 4aez_A 103 NLNVVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCL 182 (401)
T ss_dssp TTSEEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEE
T ss_pred CCCEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEecCCCCceEEE
Confidence 3557777788888888742 388999999999 8999999999999999999999999999999999999
Q ss_pred EEecCCCCEEEEEcCCCcEEEEeCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCceeEEe
Q 008820 299 VYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTM 378 (552)
Q Consensus 299 ~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~ 378 (552)
+|.+ .++++++.||.|++||++.... ....+..+.. .....++++++++|++|+.||.|++||+++++++..+
T Consensus 183 ~~~~---~~l~~~~~dg~i~i~d~~~~~~--~~~~~~~~~~--~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~ 255 (401)
T 4aez_A 183 SWNR---HVLSSGSRSGAIHHHDVRIANH--QIGTLQGHSS--EVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTK 255 (401)
T ss_dssp EEET---TEEEEEETTSEEEEEETTSSSC--EEEEEECCSS--CEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEE
T ss_pred EECC---CEEEEEcCCCCEEEEecccCcc--eeeEEcCCCC--CeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEe
Confidence 9943 4899999999999999985332 2223333322 2234577888999999999999999999999999999
Q ss_pred cCCCCCeEEEEEeC---CEEEEEe--CCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEE--CCCcEEEE
Q 008820 379 SGHKSAVSTLAVCN---GVLYSGS--RDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSH--ESGSIKVW 451 (552)
Q Consensus 379 ~~h~~~v~~l~~~~---~~l~s~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~--~dg~i~iw 451 (552)
..|...|.+++|++ .++++++ .|+.|++||+++++.+..+..+ ..+.. ++|+|+++.+++++ .||.|++|
T Consensus 256 ~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~~--~~v~~-~~~s~~~~~l~~~~g~~dg~i~v~ 332 (401)
T 4aez_A 256 TNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVDAG--SQVTS-LIWSPHSKEIMSTHGFPDNNLSIW 332 (401)
T ss_dssp CCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEECS--SCEEE-EEECSSSSEEEEEECTTTCEEEEE
T ss_pred cCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEeCC--CcEEE-EEECCCCCeEEEEeecCCCcEEEE
Confidence 99999999999993 3777765 7999999999999999888643 34444 79999999999954 89999999
Q ss_pred eCCc--ce--eeeecccceEEEEEe--cCCEEEEEeCCCeEEEEecCCCeeeee
Q 008820 452 RNDK--FM--KSMQTHKGSVFAVFL--EGKWLFTGGWDKTVSVQELAGDEFEED 499 (552)
Q Consensus 452 d~~~--~~--~~~~~h~~~v~~v~~--~~~~l~sgs~dg~i~iwd~~~~~~~~~ 499 (552)
|... .. ..+.+|...|.++.+ ++.+|++++.||.|++||+.+++....
T Consensus 333 ~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~~~~~~~ 386 (401)
T 4aez_A 333 SYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTAASDENLKFWRVYDGDHVKR 386 (401)
T ss_dssp EEETTEEEEEEEEECCSSCCCEEEECTTSSEEEEECTTSEEEEEECCC------
T ss_pred ecCCccceeEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCccccc
Confidence 9654 33 346789999998887 899999999999999999998766544
No 87
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.97 E-value=1.3e-30 Score=259.79 Aligned_cols=265 Identities=12% Similarity=0.069 Sum_probs=200.1
Q ss_pred cccceeeecCcceEEEeeCCCeEEEEEe-----------ecCccceEEEEEc--CCEEEEEeCCCcEEEEeCCCCe---E
Q 008820 221 DIDQARAAGGVKDLVNGLSKGNVKFKDL-----------QGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFS---H 284 (552)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l-----------~~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~~---~ 284 (552)
.+..+.++++++.++++..++.+.+|++ .+|.+.|++++|+ +++|++++.|++|++||+.+++ .
T Consensus 13 ~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~ 92 (377)
T 3dwl_C 13 PSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQ 92 (377)
T ss_dssp CCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------CCCC
T ss_pred cEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceee
Confidence 4777888888888888888888888764 4799999999999 8999999999999999999877 6
Q ss_pred EEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcE
Q 008820 285 VHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTI 364 (552)
Q Consensus 285 ~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i 364 (552)
...+.+|...|.+++|+|++. ++++++.|+.|++||++..........+...+. ......++++++++|++|+.|+.|
T Consensus 93 ~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~-~~v~~~~~~~~~~~l~~~~~d~~i 170 (377)
T 3dwl_C 93 TLVLLRLNRAATFVRWSPNED-KFAVGSGARVISVCYFEQENDWWVSKHLKRPLR-STILSLDWHPNNVLLAAGCADRKA 170 (377)
T ss_dssp EEECCCCSSCEEEEECCTTSS-CCEEEESSSCEEECCC-----CCCCEEECSSCC-SCEEEEEECTTSSEEEEEESSSCE
T ss_pred eeEecccCCceEEEEECCCCC-EEEEEecCCeEEEEEECCcccceeeeEeecccC-CCeEEEEEcCCCCEEEEEeCCCEE
Confidence 777889999999999999655 678999999999999987764333444443122 122345788889999999999999
Q ss_pred EEEECC------------------CCceeEEecCCCCCeEEEEEe--CCEEEEEeCCCcEEEEECCCCce----eEEEec
Q 008820 365 KAWSLL------------------DGTLSCTMSGHKSAVSTLAVC--NGVLYSGSRDGTIRLWSLSDHSL----LTVLEE 420 (552)
Q Consensus 365 ~iwd~~------------------~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~----~~~~~~ 420 (552)
++||++ .++++..+ +|...|++++|+ +.+|++++.|++|++||+++++. +..+..
T Consensus 171 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~ 249 (377)
T 3dwl_C 171 YVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRALITVKL 249 (377)
T ss_dssp EEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEEECCCEEC
T ss_pred EEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcceeeEeecC
Confidence 999985 34566666 899999999999 34899999999999999999887 666666
Q ss_pred CCCCceEEEEEEcCCCCEEEEEECCCcEEEEeCCc-c---e----------------------------------eee--
Q 008820 421 DSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDK-F---M----------------------------------KSM-- 460 (552)
Q Consensus 421 ~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~~-~---~----------------------------------~~~-- 460 (552)
+ ...+.+ ++|+|++++|++|+.++.+ +|+... . . ..+
T Consensus 250 ~-~~~v~~-~~~s~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (377)
T 3dwl_C 250 S-QLPLRS-LLWANESAIVAAGYNYSPI-LLQGNESGWAHTRDLDAGTSKTSFTHTGNTGEGREEEGPVSFTALRSTFRN 326 (377)
T ss_dssp S-SSCEEE-EEEEETTEEEEEESSSSEE-EECCCC---CCSBCCCSCCCCCCBSSSSSBCCCCCC---------------
T ss_pred C-CCceEE-EEEcCCCCEEEEEcCCcEE-EEEeCCCceEEEeeecccccccccccccccccccccccccccccccccccc
Confidence 5 344554 6999999999988766655 665320 0 0 001
Q ss_pred --------------ecccceEEEEEe---cCC---EEEEEeCCCeEEEEec
Q 008820 461 --------------QTHKGSVFAVFL---EGK---WLFTGGWDKTVSVQEL 491 (552)
Q Consensus 461 --------------~~h~~~v~~v~~---~~~---~l~sgs~dg~i~iwd~ 491 (552)
..|.+.|.++.+ ++. .|+|||.||.|++||+
T Consensus 327 ~~~~g~~~~~~~~~~~H~~~i~~~~~~~~~~~~~~~~~s~g~Dg~i~iWdl 377 (377)
T 3dwl_C 327 MDLKGSSQSISSLPTVHQNMIATLRPYAGTPGNITAFTSSGTDGRVVLWTL 377 (377)
T ss_dssp ----------CCCSSSCSSCEEEEEEEEEETTEEEEEEEEETTSEEEEECC
T ss_pred hhhccccccccccCccccceeEEEeccCCCCCceEEEEeecCCCcEEEecC
Confidence 129999999985 333 7999999999999985
No 88
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.97 E-value=8.9e-30 Score=253.48 Aligned_cols=246 Identities=17% Similarity=0.230 Sum_probs=192.6
Q ss_pred EEEeecCccceEEEEEc--CCEEEEEeCCCcEEEEeCC--CCeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEE
Q 008820 245 FKDLQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLK--DFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVW 320 (552)
Q Consensus 245 ~~~l~~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~--~~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vw 320 (552)
+..+.+|.++|++++|+ +++|++|+.||.|++||+. +++.+..+.+|...|.+++|+++.
T Consensus 4 ~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~---------------- 67 (379)
T 3jrp_A 4 VVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPK---------------- 67 (379)
T ss_dssp -CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGG----------------
T ss_pred cEEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCC----------------
Confidence 45678999999999999 8999999999999999998 667788899999999999997641
Q ss_pred eCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCc--eeEEecCCCCCeEEEEEe-C--C-E
Q 008820 321 SFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGT--LSCTMSGHKSAVSTLAVC-N--G-V 394 (552)
Q Consensus 321 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~--~~~~~~~h~~~v~~l~~~-~--~-~ 394 (552)
++++|++|+.||.|++||+.+++ .+..+..|...|.+++|+ + + +
T Consensus 68 ------------------------------~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 117 (379)
T 3jrp_A 68 ------------------------------FGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPL 117 (379)
T ss_dssp ------------------------------GCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSE
T ss_pred ------------------------------CCCEEEEeccCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCE
Confidence 12345555555666666655554 566777899999999999 3 3 8
Q ss_pred EEEEeCCCcEEEEECCCCce--eEEEecCCCCceEEEEEEcC-------------CCCEEEEEECCCcEEEEeCCc----
Q 008820 395 LYSGSRDGTIRLWSLSDHSL--LTVLEEDSSGAVSSVLSLTA-------------VQHTLVVSHESGSIKVWRNDK---- 455 (552)
Q Consensus 395 l~s~~~dg~i~iwd~~~~~~--~~~~~~~~~~~~~~~~~~s~-------------~~~~l~~g~~dg~i~iwd~~~---- 455 (552)
+++++.|+.|++||++++.. ...+..+ ...+.+ ++|+| ++.++++|+.||.|++||++.
T Consensus 118 l~~~~~d~~i~v~d~~~~~~~~~~~~~~~-~~~v~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~ 195 (379)
T 3jrp_A 118 LLVASSDGKVSVVEFKENGTTSPIIIDAH-AIGVNS-ASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQT 195 (379)
T ss_dssp EEEEETTSEEEEEECCTTSCCCEEEEECC-TTCEEE-EEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTE
T ss_pred EEEecCCCcEEEEecCCCCceeeEEecCC-CCceEE-EEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcc
Confidence 99999999999999998743 3333333 444555 68998 699999999999999999642
Q ss_pred --ceeeeecccceEEEEEe--c---CCEEEEEeCCCeEEEEecCCCeeeeeeccCCCcccCcceEEEEEeCC--eEEEEe
Q 008820 456 --FMKSMQTHKGSVFAVFL--E---GKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQG--KLFVGC 526 (552)
Q Consensus 456 --~~~~~~~h~~~v~~v~~--~---~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~--~l~s~s 526 (552)
....+.+|...|.++.| + +.+|++++.||.|++||+.++.............+...|.+++|+++ .|++++
T Consensus 196 ~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~ 275 (379)
T 3jrp_A 196 YVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSG 275 (379)
T ss_dssp EEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEE
T ss_pred eeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEec
Confidence 34577889999999987 5 88999999999999999987642211111112224677999999953 499999
Q ss_pred CCCeEEEEEecC
Q 008820 527 ADRTVKIALCNR 538 (552)
Q Consensus 527 ~Dg~v~iw~~~~ 538 (552)
.||.|++|+++.
T Consensus 276 ~dg~i~iw~~~~ 287 (379)
T 3jrp_A 276 GDNKVTLWKENL 287 (379)
T ss_dssp SSSSEEEEEEEE
T ss_pred CCCcEEEEeCCC
Confidence 999999999983
No 89
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.97 E-value=2.5e-29 Score=246.76 Aligned_cols=246 Identities=17% Similarity=0.220 Sum_probs=199.2
Q ss_pred eecCccceEEEEEc--CCEEEEEeCCCcEEEEeCCCC----eEEEEEeCCCCCeEEEEEecC-CCCEEEEEcCCCcEEEE
Q 008820 248 LQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDF----SHVHTFKGHDHKVMAVVYVDE-DQPLCISGDSGGGIFVW 320 (552)
Q Consensus 248 l~~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~----~~~~~~~~h~~~v~~v~~~~~-~~~~l~s~~~dg~i~vw 320 (552)
+.+|.+.|++++|+ +++|++|+.||+|++||+.++ +....+.+|...|.+++|+|. ++.+|++++.||.|++|
T Consensus 7 ~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vw 86 (351)
T 3f3f_A 7 DSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLW 86 (351)
T ss_dssp ECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEE
T ss_pred CcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEE
Confidence 67999999999999 899999999999999999876 577888999999999999985 36689999999999999
Q ss_pred eCCCCCCC------ccccccccCCCceeeeEEEEeeC--CCEEEEeeCCCcEEEEECCCCceeEEec-------------
Q 008820 321 SFSFPLGH------EPLKKWNEEKDWRYSGIHALTTS--GRYLYTGSGDRTIKAWSLLDGTLSCTMS------------- 379 (552)
Q Consensus 321 d~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~--~~~l~sgs~dg~i~iwd~~~~~~~~~~~------------- 379 (552)
|++.+... ..+..+..+.. .....+++++ ++++++++.||.|++||+++++.+..+.
T Consensus 87 d~~~~~~~~~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 164 (351)
T 3f3f_A 87 EEDPDQEECSGRRWNKLCTLNDSKG--SLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPA 164 (351)
T ss_dssp EECTTSCTTSSCSEEEEEEECCCSS--CEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCS
T ss_pred ecCCCcccccccCcceeeeecccCC--ceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccC
Confidence 99876432 12233333322 1223467787 8899999999999999998876554332
Q ss_pred CCCCCeEEEEEe-----CCEEEEEeCCCcEEEEECCCCce--eEEEecCCCCceEEEEEEcCCC----CEEEEEECCCcE
Q 008820 380 GHKSAVSTLAVC-----NGVLYSGSRDGTIRLWSLSDHSL--LTVLEEDSSGAVSSVLSLTAVQ----HTLVVSHESGSI 448 (552)
Q Consensus 380 ~h~~~v~~l~~~-----~~~l~s~~~dg~i~iwd~~~~~~--~~~~~~~~~~~~~~~~~~s~~~----~~l~~g~~dg~i 448 (552)
.|...+.+++|+ +..+++++.|+.+.+|+...++. +..+..+ ...+.+ ++|+|++ ++|++|+.||.|
T Consensus 165 ~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h-~~~i~~-~~~~p~~~~~~~~l~s~~~dg~i 242 (351)
T 3f3f_A 165 NHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGH-KSLIRS-ISWAPSIGRWYQLIATGCKDGRI 242 (351)
T ss_dssp SCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCC-CSCEEE-EEECCCSSCSSEEEEEEETTSCE
T ss_pred CcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCC-CcceeE-EEECCCCCCcceEEEEEcCCCeE
Confidence 688899999998 34999999999998888887775 4444443 445555 6999998 899999999999
Q ss_pred EEEeCCc------------------------------------------------ceeeeecccceEEEEEe--cCCEEE
Q 008820 449 KVWRNDK------------------------------------------------FMKSMQTHKGSVFAVFL--EGKWLF 478 (552)
Q Consensus 449 ~iwd~~~------------------------------------------------~~~~~~~h~~~v~~v~~--~~~~l~ 478 (552)
++||++. .+..+.+|...|.++.| ++++|+
T Consensus 243 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~ 322 (351)
T 3f3f_A 243 RIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTGTILS 322 (351)
T ss_dssp EEEEEEECC---------------------------------------CCSEEEEEEEEECTTSSCEEEEEECSSSCCEE
T ss_pred EEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcCCCCEEE
Confidence 9999543 44566789999999988 799999
Q ss_pred EEeCCCeEEEEecCCCeee
Q 008820 479 TGGWDKTVSVQELAGDEFE 497 (552)
Q Consensus 479 sgs~dg~i~iwd~~~~~~~ 497 (552)
+++.||.|++||+.+++..
T Consensus 323 s~~~dg~v~iw~~~~~~~~ 341 (351)
T 3f3f_A 323 SAGDDGKVRLWKATYSNEF 341 (351)
T ss_dssp EEETTSCEEEEEECTTSCE
T ss_pred EecCCCcEEEEecCcCcch
Confidence 9999999999999876443
No 90
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.97 E-value=5.9e-30 Score=257.58 Aligned_cols=279 Identities=13% Similarity=0.194 Sum_probs=213.1
Q ss_pred EEEEcCC---EEEEEeCCCcEEEEeCCCCe----EEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCC-
Q 008820 257 GLAVGGG---FLFSSSFDKSIHVWSLKDFS----HVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGH- 328 (552)
Q Consensus 257 ~l~~s~~---~l~s~s~dg~I~iwd~~~~~----~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~- 328 (552)
.++++.+ ++++++.||.|+||++.+.. .+..+.+|.+.|.+++|+|.++.+|++|+.||+|++||+.++...
T Consensus 39 ~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~ 118 (402)
T 2aq5_A 39 FCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVL 118 (402)
T ss_dssp SEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSS
T ss_pred cEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCcc
Confidence 4677733 34457889999999996542 345577899999999999966679999999999999999876432
Q ss_pred ---ccccccccCCCceeeeEEEEeeCC-CEEEEeeCCCcEEEEECCCCceeEEe--cCCCCCeEEEEEe--CCEEEEEeC
Q 008820 329 ---EPLKKWNEEKDWRYSGIHALTTSG-RYLYTGSGDRTIKAWSLLDGTLSCTM--SGHKSAVSTLAVC--NGVLYSGSR 400 (552)
Q Consensus 329 ---~~~~~~~~~~~~~~~~~~~~~~~~-~~l~sgs~dg~i~iwd~~~~~~~~~~--~~h~~~v~~l~~~--~~~l~s~~~ 400 (552)
..+..+..+.. .....++++++ ++|++|+.||.|++||+++++.+..+ .+|...|.+++|+ +.+|++++.
T Consensus 119 ~~~~~~~~~~~h~~--~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 196 (402)
T 2aq5_A 119 PLREPVITLEGHTK--RVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCR 196 (402)
T ss_dssp CBCSCSEEEECCSS--CEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEET
T ss_pred ccCCceEEecCCCC--eEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEec
Confidence 22333333332 22345778887 69999999999999999999999999 8899999999999 349999999
Q ss_pred CCcEEEEECCCCceeEEEecCCCCc-eEEEEEEcCCCCEEEEE---ECCCcEEEEeCCcc---eeeee-cccceEEEEEe
Q 008820 401 DGTIRLWSLSDHSLLTVLEEDSSGA-VSSVLSLTAVQHTLVVS---HESGSIKVWRNDKF---MKSMQ-THKGSVFAVFL 472 (552)
Q Consensus 401 dg~i~iwd~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~~l~~g---~~dg~i~iwd~~~~---~~~~~-~h~~~v~~v~~ 472 (552)
|+.|++||+++++.+..+...+.+. +.. +.|+|+++++++| +.|+.|++||.+.. ..... .|...+.++.+
T Consensus 197 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~ 275 (402)
T 2aq5_A 197 DKRVRVIEPRKGTVVAEKDRPHEGTRPVH-AVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFF 275 (402)
T ss_dssp TSEEEEEETTTTEEEEEEECSSCSSSCCE-EEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEE
T ss_pred CCcEEEEeCCCCceeeeeccCCCCCcceE-EEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEEEE
Confidence 9999999999999998884333343 444 6899999999999 78999999997642 22333 46677877776
Q ss_pred --cCCEEE-EEeCCCeEEEEecCCCee-eeeeccCCCcccCcceEEEEEeCCeEEEEeCCCeEEEEEecCCcc
Q 008820 473 --EGKWLF-TGGWDKTVSVQELAGDEF-EEDVIPTGAIPCGSVITALLYWQGKLFVGCADRTVKIALCNRQIP 541 (552)
Q Consensus 473 --~~~~l~-sgs~dg~i~iwd~~~~~~-~~~~~~~~~~~~~~~v~~l~~~~~~l~s~s~Dg~v~iw~~~~~~~ 541 (552)
++++|+ +|+.||.|++||+.+++. ...+.... +...|.+++|+|+..+.++.|+.+++|++.....
T Consensus 276 s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~---~~~~v~~~~~sp~~~~~~s~~~~~~~~~l~~~~~ 345 (402)
T 2aq5_A 276 DPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFS---SKESQRGMGYMPKRGLEVNKCEIARFYKLHERKC 345 (402)
T ss_dssp ETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEEC---CSSCCSEEEECCGGGSCGGGTEEEEEEEEETTEE
T ss_pred cCCCCEEEEEEcCCCeEEEEEecCCCcceEeecccc---cCCcccceEEecccccceecceeEEEEEcCCCcE
Confidence 788886 555799999999998763 22222211 2577999999986634445788999999985433
No 91
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.97 E-value=7.6e-29 Score=249.34 Aligned_cols=307 Identities=18% Similarity=0.162 Sum_probs=215.6
Q ss_pred CCccccceeeec-CcceEEEeeCCCeEEEEEee----------------------cCccceEEEEEc---CCEEEEEeCC
Q 008820 218 DGADIDQARAAG-GVKDLVNGLSKGNVKFKDLQ----------------------GHRDCVTGLAVG---GGFLFSSSFD 271 (552)
Q Consensus 218 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~----------------------~H~~~V~~l~~s---~~~l~s~s~d 271 (552)
+...+..+.+++ .+..++++..++.+.+|++. +|...|++++|+ +.+|++++.|
T Consensus 42 h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d 121 (408)
T 4a11_B 42 HGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFD 121 (408)
T ss_dssp CSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEETT
T ss_pred cCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeCC
Confidence 345588889999 89999999999999999964 499999999998 6799999999
Q ss_pred CcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCC--CEEEEEcCCCcEEEEeCCCCCCCccccccccCCCceeeeEEEEe
Q 008820 272 KSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQ--PLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALT 349 (552)
Q Consensus 272 g~I~iwd~~~~~~~~~~~~h~~~v~~v~~~~~~~--~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (552)
|.|++||+.+++....+. +...+.++.|++.+. .++++++.|+.|++||++++.....+. .+.. .....+++
T Consensus 122 ~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~---~~~~--~v~~~~~~ 195 (408)
T 4a11_B 122 KTLKVWDTNTLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQ---GHRQ--EILAVSWS 195 (408)
T ss_dssp SEEEEEETTTTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEEC---CCCS--CEEEEEEC
T ss_pred CeEEEeeCCCCccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeec---CCCC--cEEEEEEC
Confidence 999999999999988887 788899999998643 488999999999999998765443332 2222 12344678
Q ss_pred eCCC-EEEEeeCCCcEEEEECCCCc-eeEEe---------------cCCCCCeEEEEEe--CCEEEEEeCCCcEEEEECC
Q 008820 350 TSGR-YLYTGSGDRTIKAWSLLDGT-LSCTM---------------SGHKSAVSTLAVC--NGVLYSGSRDGTIRLWSLS 410 (552)
Q Consensus 350 ~~~~-~l~sgs~dg~i~iwd~~~~~-~~~~~---------------~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~ 410 (552)
++++ .+++|+.||.|++||++++. ++..+ ..|...|.+++|+ +.+|++++.||.|++||++
T Consensus 196 ~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~ 275 (408)
T 4a11_B 196 PRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSS 275 (408)
T ss_dssp SSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred CCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEEECC
Confidence 8887 69999999999999998765 44444 5788999999999 3499999999999999999
Q ss_pred CCceeEEEecCC----CCceEEEEEEcCCCCEEEEEECCCcEEEEeCC--cceeeeecccceEEEEEe--cCCEEEEEeC
Q 008820 411 DHSLLTVLEEDS----SGAVSSVLSLTAVQHTLVVSHESGSIKVWRND--KFMKSMQTHKGSVFAVFL--EGKWLFTGGW 482 (552)
Q Consensus 411 ~~~~~~~~~~~~----~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~--~~~~~~~~h~~~v~~v~~--~~~~l~sgs~ 482 (552)
+++......... ...... ......+..+++++.++.|++||.. +.+..+.+|...|.++.| ++++|++++.
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~ 354 (408)
T 4a11_B 276 NGENTLVNYGKVCNNSKKGLKF-TVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKTVDCCVFQSNFQELYSGSR 354 (408)
T ss_dssp TCCBCCCCCCCCCCCCSSCCCC-EECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSSCEEEEEEETTTTEEEEEET
T ss_pred CCccceecccccccccccccee-EEecCCCceEEEEecCCEEEEEECcCCcceeeeccCCCeEEEEEEcCCCCEEEEECC
Confidence 987654443221 111111 2233445567777889999999964 577888999999999887 8999999999
Q ss_pred CCeEEEEecCCCeeeeeeccCCCcccCcceEEEEEe-CCeEEEEeCCCeEEEEEec
Q 008820 483 DKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYW-QGKLFVGCADRTVKIALCN 537 (552)
Q Consensus 483 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~-~~~l~s~s~Dg~v~iw~~~ 537 (552)
||.|++||+.+.+......... ....+... ...+.+++.|+.+++|+.+
T Consensus 355 dg~i~iw~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~W~~~ 404 (408)
T 4a11_B 355 DCNILAWVPSLYEPVPDDDETT------TKSQLNPAFEDAWSSSDEEGGTSAWSHP 404 (408)
T ss_dssp TSCEEEEEECC---------------------------------------------
T ss_pred CCeEEEEeCCCCCccCCCCceE------eccccccccceeecccCccCceeecCCc
Confidence 9999999999876544322211 11112221 2336678889999999876
No 92
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.97 E-value=2.1e-28 Score=236.81 Aligned_cols=266 Identities=20% Similarity=0.291 Sum_probs=216.3
Q ss_pred CCccccceeeecCcceEEEeeCCCeEEEEEe---------ecCccceEEEEEc--CCEEEEEeCCCcEEEEeCCCC---e
Q 008820 218 DGADIDQARAAGGVKDLVNGLSKGNVKFKDL---------QGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDF---S 283 (552)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l---------~~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~---~ 283 (552)
+...+..+.+ +.+..++++..++.+.+|++ .+|.+.|.+++|+ ++++++++.||.|++|++.+. +
T Consensus 17 h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~ 95 (313)
T 3odt_A 17 HDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVPLFATSGED 95 (313)
T ss_dssp CSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEEETTCCTTSC
T ss_pred CCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEEEEeeecCCCC
Confidence 3445777777 77888999999999999984 5689999999999 999999999999999998654 6
Q ss_pred EEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCc
Q 008820 284 HVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRT 363 (552)
Q Consensus 284 ~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~ 363 (552)
.+..+.+|...|.+++|. +.++++++.||.|++||.. .....+..+.. ....+....++++.+++++.||.
T Consensus 96 ~~~~~~~~~~~i~~~~~~---~~~l~~~~~d~~i~~~d~~-----~~~~~~~~~~~-~v~~~~~~~~~~~~l~~~~~d~~ 166 (313)
T 3odt_A 96 PLYTLIGHQGNVCSLSFQ---DGVVISGSWDKTAKVWKEG-----SLVYNLQAHNA-SVWDAKVVSFSENKFLTASADKT 166 (313)
T ss_dssp C-CEECCCSSCEEEEEEE---TTEEEEEETTSEEEEEETT-----EEEEEEECCSS-CEEEEEEEETTTTEEEEEETTSC
T ss_pred cccchhhcccCEEEEEec---CCEEEEEeCCCCEEEEcCC-----cEEEecccCCC-ceeEEEEccCCCCEEEEEECCCC
Confidence 678889999999999993 3488999999999999922 22333333322 22333333348899999999999
Q ss_pred EEEEECCCCceeEEecC-CCCCeEEEEEe-CCEEEEEeCCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEE
Q 008820 364 IKAWSLLDGTLSCTMSG-HKSAVSTLAVC-NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVV 441 (552)
Q Consensus 364 i~iwd~~~~~~~~~~~~-h~~~v~~l~~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~ 441 (552)
|++|| ..+....+.. |...+.+++|+ ++.+++++.||.|++||+++++.+..+..+. ..+.. ++|+|++ .+++
T Consensus 167 i~i~d--~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~-~~i~~-~~~~~~~-~l~~ 241 (313)
T 3odt_A 167 IKLWQ--NDKVIKTFSGIHNDVVRHLAVVDDGHFISCSNDGLIKLVDMHTGDVLRTYEGHE-SFVYC-IKLLPNG-DIVS 241 (313)
T ss_dssp EEEEE--TTEEEEEECSSCSSCEEEEEEEETTEEEEEETTSEEEEEETTTCCEEEEEECCS-SCEEE-EEECTTS-CEEE
T ss_pred EEEEe--cCceEEEEeccCcccEEEEEEcCCCeEEEccCCCeEEEEECCchhhhhhhhcCC-ceEEE-EEEecCC-CEEE
Confidence 99999 5667777777 99999999999 6689999999999999999999999988663 44555 6999999 5889
Q ss_pred EECCCcEEEEeCC--cceeeeecccceEEEEEe--cCCEEEEEeCCCeEEEEecCCCeeeee
Q 008820 442 SHESGSIKVWRND--KFMKSMQTHKGSVFAVFL--EGKWLFTGGWDKTVSVQELAGDEFEED 499 (552)
Q Consensus 442 g~~dg~i~iwd~~--~~~~~~~~h~~~v~~v~~--~~~~l~sgs~dg~i~iwd~~~~~~~~~ 499 (552)
++.||.|++||.. +....+..|...|.++.+ +++ +++++.||.|++||+++++....
T Consensus 242 ~~~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~iw~~~~~~~~~~ 302 (313)
T 3odt_A 242 CGEDRTVRIWSKENGSLKQVITLPAISIWSVDCMSNGD-IIVGSSDNLVRIFSQEKSRWASE 302 (313)
T ss_dssp EETTSEEEEECTTTCCEEEEEECSSSCEEEEEECTTSC-EEEEETTSCEEEEESCGGGCCC-
T ss_pred EecCCEEEEEECCCCceeEEEeccCceEEEEEEccCCC-EEEEeCCCcEEEEeCCCCceeeh
Confidence 9999999999965 567788899999999988 666 67799999999999998765544
No 93
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.97 E-value=2.7e-28 Score=268.22 Aligned_cols=309 Identities=18% Similarity=0.247 Sum_probs=243.3
Q ss_pred ccccceeeecCcceEEEeeCCCeEEEEE---------eecCccceEEEEEc--CCEEEEEeCCCcEEEEeCCCCeEEEEE
Q 008820 220 ADIDQARAAGGVKDLVNGLSKGNVKFKD---------LQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTF 288 (552)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------l~~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~~~~~~~ 288 (552)
..+..+.+++.+..++++..++.+.+|+ +.+|.++|++++|+ +++|++|+.||.|++||+.+++.+..+
T Consensus 14 ~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~ 93 (814)
T 3mkq_A 14 DRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDF 93 (814)
T ss_dssp SCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred CceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEE
Confidence 3477888899999999999999998887 46799999999999 899999999999999999999999999
Q ss_pred eCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCccccccccCCCceeeeEEEEee-CCCEEEEeeCCCcEEEE
Q 008820 289 KGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTT-SGRYLYTGSGDRTIKAW 367 (552)
Q Consensus 289 ~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~sgs~dg~i~iw 367 (552)
.+|.+.|.+++|+|++. ++++++.||.|++||++++.. .......+.. .....+++| +++.+++++.||.|++|
T Consensus 94 ~~~~~~v~~~~~s~~~~-~l~~~~~dg~i~vw~~~~~~~--~~~~~~~~~~--~v~~~~~~p~~~~~l~~~~~dg~v~vw 168 (814)
T 3mkq_A 94 EAHPDYIRSIAVHPTKP-YVLSGSDDLTVKLWNWENNWA--LEQTFEGHEH--FVMCVAFNPKDPSTFASGCLDRTVKVW 168 (814)
T ss_dssp ECCSSCEEEEEECSSSS-EEEEEETTSEEEEEEGGGTSE--EEEEEECCSS--CEEEEEEETTEEEEEEEEETTSEEEEE
T ss_pred ecCCCCEEEEEEeCCCC-EEEEEcCCCEEEEEECCCCce--EEEEEcCCCC--cEEEEEEEcCCCCEEEEEeCCCeEEEE
Confidence 99999999999999766 678999999999999986521 2222222222 123446777 77899999999999999
Q ss_pred ECCCCceeEEecCCC-CCeEEEEEeC----CEEEEEeCCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEE
Q 008820 368 SLLDGTLSCTMSGHK-SAVSTLAVCN----GVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVS 442 (552)
Q Consensus 368 d~~~~~~~~~~~~h~-~~v~~l~~~~----~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g 442 (552)
|+.+++....+..+. ..+.+++|++ .++++++.||.|++||+++++.+..+..+. ..+.. ++|+|++++++++
T Consensus 169 d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~-~~v~~-~~~~~~~~~l~~~ 246 (814)
T 3mkq_A 169 SLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHM-SNVSF-AVFHPTLPIIISG 246 (814)
T ss_dssp ETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEECCS-SCEEE-EEECSSSSEEEEE
T ss_pred ECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcCCC-CCEEE-EEEcCCCCEEEEE
Confidence 999888887776555 8899999973 399999999999999999999988887663 44544 6999999999999
Q ss_pred ECCCcEEEEeCC--cceeeeecccceEEEEEe--cCC--EEEEEeCCCeEEEEecCCCeeeeeeccCC------------
Q 008820 443 HESGSIKVWRND--KFMKSMQTHKGSVFAVFL--EGK--WLFTGGWDKTVSVQELAGDEFEEDVIPTG------------ 504 (552)
Q Consensus 443 ~~dg~i~iwd~~--~~~~~~~~h~~~v~~v~~--~~~--~l~sgs~dg~i~iwd~~~~~~~~~~~~~~------------ 504 (552)
+.||.|++||.. +....+..|...+.++++ ++. ++++++ |+.+.+|++............+
T Consensus 247 ~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 325 (814)
T 3mkq_A 247 SEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGF-DNGFTVLSLGNDEPTLSLDPVGKLVWSGGKNAAA 325 (814)
T ss_dssp ETTSCEEEEETTTCSEEEEECCSSSSEEEEEECTTCGGGEEEEEE-TTEEEEEECSCCSCCEEECSSSEEEEECCTTSCT
T ss_pred eCCCeEEEEECCCCcEEEEeecCCCcEEEEEEccCCCceEEEEEe-CCCEEEEEcCCCCceeEECCCCCEEEECcccccc
Confidence 999999999965 567788889999999987 555 455555 6778889876432111110000
Q ss_pred --------------------------CcccCcceEEEEEeC-Ce-EEEEeCCCeEEEEEec
Q 008820 505 --------------------------AIPCGSVITALLYWQ-GK-LFVGCADRTVKIALCN 537 (552)
Q Consensus 505 --------------------------~~~~~~~v~~l~~~~-~~-l~s~s~Dg~v~iw~~~ 537 (552)
...+...+.+++|+| +. +++++ ||.+.+|++.
T Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~la~~~-~~~~~i~~~~ 385 (814)
T 3mkq_A 326 SDIFTAVIRGNEEVEQDEPLSLQTKELGSVDVFPQSLAHSPNGRFVTVVG-DGEYVIYTAL 385 (814)
T ss_dssp TCEEEEECCSCCCCCSSSCBCCCCEEECCCSSCCSEEEECTTSSEEEEEE-TTEEEEEETT
T ss_pred eeeeeeecccccccccCccceeeeecCCCCccCCceeEECCCCCEEEEec-CCEEEEEECc
Confidence 011233478899995 33 55565 8999999975
No 94
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1e-29 Score=262.11 Aligned_cols=256 Identities=11% Similarity=0.066 Sum_probs=193.9
Q ss_pred ceEEEeeCCCeEEEEEe-------------ecCccceEEEEEc-C-------CEEEEEeCCCcEEEEeCCCCeE------
Q 008820 232 KDLVNGLSKGNVKFKDL-------------QGHRDCVTGLAVG-G-------GFLFSSSFDKSIHVWSLKDFSH------ 284 (552)
Q Consensus 232 ~~~~~~~~~~~~~~~~l-------------~~H~~~V~~l~~s-~-------~~l~s~s~dg~I~iwd~~~~~~------ 284 (552)
..++++..++.+++|++ .+|.+.|++++|+ . ++||+|+.||+|++||+.+++.
T Consensus 174 ~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~ 253 (524)
T 2j04_B 174 EMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFK 253 (524)
T ss_dssp --------CEEEEEEEEETTTCCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEE
T ss_pred hhhccCCCCceEEEEEccCCCCCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccce
Confidence 34556667788888875 3567889999998 2 5999999999999999986632
Q ss_pred -----EEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCccccccccCCCceeeeE-EEEeeCC-CEEEE
Q 008820 285 -----VHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGI-HALTTSG-RYLYT 357 (552)
Q Consensus 285 -----~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~l~s 357 (552)
..++.+|...|++++|++++ .|++|+.||+|++||++++.. +...+..+.. ....+ .++++++ ++|++
T Consensus 254 ~~~~p~~~l~~h~~~v~sv~~s~~~--~lasgs~DgtV~lWD~~~~~~--~~~~~~~H~~-~V~sv~~~~s~~g~~~laS 328 (524)
T 2j04_B 254 MCEKPSLTLSLADSLITTFDFLSPT--TVVCGFKNGFVAEFDLTDPEV--PSFYDQVHDS-YILSVSTAYSDFEDTVVST 328 (524)
T ss_dssp CCCSCSEEECCTTTCEEEEEESSSS--EEEEEETTSEEEEEETTBCSS--CSEEEECSSS-CEEEEEEECCTTSCCEEEE
T ss_pred eecCceEEEEcCCCCEEEEEecCCC--eEEEEeCCCEEEEEECCCCCC--ceEEeecccc-cEEEEEEEcCCCCCeEEEE
Confidence 24788999999999999743 789999999999999986532 2222333333 33334 2567777 79999
Q ss_pred eeCCCcEEEEECCCCceeEEecCCCC--CeEEEEEeC-C-EEEEEeCCCcEEEEECCCCceeEEEecCCCCceEEEEEEc
Q 008820 358 GSGDRTIKAWSLLDGTLSCTMSGHKS--AVSTLAVCN-G-VLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLT 433 (552)
Q Consensus 358 gs~dg~i~iwd~~~~~~~~~~~~h~~--~v~~l~~~~-~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s 433 (552)
|+.|++|++||++++++...+.+|.. .|.+++|++ + .+++++.|++|++||++++.++..+..| .+.+.+ ++|+
T Consensus 329 ~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH-~~~V~s-va~S 406 (524)
T 2j04_B 329 VAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSR-ETTITA-IGVS 406 (524)
T ss_dssp EETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEEC-SSCEEE-EECC
T ss_pred eccCCeEEEEECCCCCcccccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECcccccceeeecC-CCceEE-EEeC
Confidence 99999999999999888777776653 588999994 3 8999999999999999999988888775 456666 6999
Q ss_pred CCCCEEEEEECCCcEEEEeCCc----------------------------------------------ceeeeecccceE
Q 008820 434 AVQHTLVVSHESGSIKVWRNDK----------------------------------------------FMKSMQTHKGSV 467 (552)
Q Consensus 434 ~~~~~l~~g~~dg~i~iwd~~~----------------------------------------------~~~~~~~h~~~v 467 (552)
|++++|++|+.||+|++||... ....+.+|...|
T Consensus 407 p~g~~l~Sgs~Dgtv~lwd~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~~~~~~~~~~~~~~~~g~~~~~l~gh~~~V 486 (524)
T 2j04_B 407 RLHPMVLAGSADGSLIITNAARRLLHGIKNSSATQKSLRLWKWDYSIKDDKYRIDSSYEVYPLTVNDVSKAKIDAHGINI 486 (524)
T ss_dssp SSCCBCEEEETTTEEECCBSCSSTTTCC------CCCCEEEECBCCSSSCEEEECCCCCCCC-------------CCCSC
T ss_pred CCCCeEEEEECCCEEEEEechHhhccccccCccceeeeEEEEeccCCCCCeEEccCCceecccccCCcceeeecCCCceE
Confidence 9999999999999999997320 011233467778
Q ss_pred EEEEe--c---CCEEEEEeCCCeEEEEecCCC
Q 008820 468 FAVFL--E---GKWLFTGGWDKTVSVQELAGD 494 (552)
Q Consensus 468 ~~v~~--~---~~~l~sgs~dg~i~iwd~~~~ 494 (552)
.+++| + +..+++|+.||.|+||++...
T Consensus 487 ~~Vafsp~~~~~~~lAsg~~~g~vrlw~l~~~ 518 (524)
T 2j04_B 487 TCTKWNETSAGGKCYAFSNSAGLLTLEYLSLE 518 (524)
T ss_dssp CCEEECCSTTTTTEEEEECTTSEEEEEECSCC
T ss_pred EEEECCCCCCccHHHHhhccCceEEEEEcccc
Confidence 88887 4 349999999999999998754
No 95
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.97 E-value=7.3e-29 Score=252.44 Aligned_cols=268 Identities=14% Similarity=0.196 Sum_probs=210.6
Q ss_pred CCccccceeeec-CcceEEEeeCCCeEEEEEee--------------cCccceEEEEEc--CCEEEEEeCCCcEEEEeCC
Q 008820 218 DGADIDQARAAG-GVKDLVNGLSKGNVKFKDLQ--------------GHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLK 280 (552)
Q Consensus 218 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~--------------~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~ 280 (552)
+...+..+.+++ ++..++++..++.+++|++. +|.+.|++++|+ +++|++|+.||+|++||+.
T Consensus 62 h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~ 141 (437)
T 3gre_A 62 EPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVN 141 (437)
T ss_dssp TTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEEEE
T ss_pred CCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeeccCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEec
Confidence 445688999999 89999999999999999852 588999999998 8999999999999999994
Q ss_pred ---CCeEEEEEeC------------CCCCeEEEEEec-CCCCEEEEEcCCCcEEEEeCCCCCCCccccccccCCCceeee
Q 008820 281 ---DFSHVHTFKG------------HDHKVMAVVYVD-EDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSG 344 (552)
Q Consensus 281 ---~~~~~~~~~~------------h~~~v~~v~~~~-~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~ 344 (552)
+++....+.+ +...+.++.+.. .++.++++++.|+.|++||+++......+.... +. ....
T Consensus 142 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~-h~--~~v~ 218 (437)
T 3gre_A 142 HYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIENSP-RH--GAVS 218 (437)
T ss_dssp EEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEECCG-GG--CCEE
T ss_pred cccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccCC-CC--CceE
Confidence 5555544432 445566666331 245688999999999999998765433333210 11 2233
Q ss_pred EEEEeeCCCEEEEeeCCCcEEEEECCCCceeEEec-CCCCCeEEEEEeC-----C-EEEEEeCCCcEEEEECCCCceeEE
Q 008820 345 IHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMS-GHKSAVSTLAVCN-----G-VLYSGSRDGTIRLWSLSDHSLLTV 417 (552)
Q Consensus 345 ~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~-~h~~~v~~l~~~~-----~-~l~s~~~dg~i~iwd~~~~~~~~~ 417 (552)
..++++++++|++|+.||.|++||+++++++..+. .|...|+++++++ + ++++++.||.|++||+++++.+..
T Consensus 219 ~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 298 (437)
T 3gre_A 219 SICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYA 298 (437)
T ss_dssp EEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEE
T ss_pred EEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEE
Confidence 45778899999999999999999999999999886 7888999997762 2 899999999999999999998888
Q ss_pred EecCC-------------------------CCceEEEEEEcCCCCEEEEEECCCcEEEEeCCc--ceeeeec--------
Q 008820 418 LEEDS-------------------------SGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDK--FMKSMQT-------- 462 (552)
Q Consensus 418 ~~~~~-------------------------~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~~--~~~~~~~-------- 462 (552)
+..+. ...+.+ ++++ ++++|++|+.||.|++||+.+ ....+.+
T Consensus 299 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~-l~~~-~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~ 376 (437)
T 3gre_A 299 FINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALST-ISVS-NDKILLTDEATSSIVMFSLNELSSSKAVISPSRFSDVF 376 (437)
T ss_dssp EESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCC-EEEE-TTEEEEEEGGGTEEEEEETTCGGGCEEEECC--CCCEE
T ss_pred EEcCCCCCccceecccccccccceecccccCCceEE-EEEC-CceEEEecCCCCeEEEEECCCcccceEEecccccCceE
Confidence 87542 222333 5777 778999999999999999653 3344443
Q ss_pred -----------------------------ccceEEEEEe--c--CCEEEEEeCCCeEEEEe
Q 008820 463 -----------------------------HKGSVFAVFL--E--GKWLFTGGWDKTVSVQE 490 (552)
Q Consensus 463 -----------------------------h~~~v~~v~~--~--~~~l~sgs~dg~i~iwd 490 (552)
|...|.++.+ + +.+|++|+.||.|++|+
T Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~~~~~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 377 IPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEVDETPLLVACDNSGLIGIFQ 437 (437)
T ss_dssp EEEEEETTEEEEEEECC-------------CCCEEEEEEEESSSSEEEEEEETTSCEEEEC
T ss_pred EEEEeecceEEEEEecccccccccCcccccccceeeEeeeccCCceEEEEEcCCceEEEeC
Confidence 8889999887 4 66999999999999995
No 96
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.97 E-value=2.1e-28 Score=244.50 Aligned_cols=262 Identities=17% Similarity=0.203 Sum_probs=206.0
Q ss_pred ccccceeeecCc-ceEEEeeCCCeEEEEEee-----------cCccceEEEEEc---CCEEEEEeCCCcEEEEeCCCCeE
Q 008820 220 ADIDQARAAGGV-KDLVNGLSKGNVKFKDLQ-----------GHRDCVTGLAVG---GGFLFSSSFDKSIHVWSLKDFSH 284 (552)
Q Consensus 220 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~-----------~H~~~V~~l~~s---~~~l~s~s~dg~I~iwd~~~~~~ 284 (552)
..+..+.+++.+ ..++++..++.+.+|++. +|.+.|.+++|+ +++|++++.|++|++||+.+ ..
T Consensus 74 ~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~-~~ 152 (383)
T 3ei3_B 74 RRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSG-SV 152 (383)
T ss_dssp SCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTS-CE
T ss_pred CCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCC-Cc
Confidence 447788888887 899999999999999853 699999999998 58999999999999999986 55
Q ss_pred EEEEeCC---CCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCccccccccCCCceeeeEEEEeeCCC-EEEEeeC
Q 008820 285 VHTFKGH---DHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGR-YLYTGSG 360 (552)
Q Consensus 285 ~~~~~~h---~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~sgs~ 360 (552)
+..+..| ...|.+++|+|++. ++++++.|+.|++||++ + ..+..+..+.. .....+++++++ ++++|+.
T Consensus 153 ~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~i~d~~-~---~~~~~~~~h~~--~v~~~~~~~~~~~~l~s~~~ 225 (383)
T 3ei3_B 153 IQVFAKTDSWDYWYCCVDVSVSRQ-MLATGDSTGRLLLLGLD-G---HEIFKEKLHKA--KVTHAEFNPRCDWLMATSSV 225 (383)
T ss_dssp EEEEECCCCSSCCEEEEEEETTTT-EEEEEETTSEEEEEETT-S---CEEEEEECSSS--CEEEEEECSSCTTEEEEEET
T ss_pred eEEEeccCCCCCCeEEEEECCCCC-EEEEECCCCCEEEEECC-C---CEEEEeccCCC--cEEEEEECCCCCCEEEEEeC
Confidence 6666544 48899999999665 88999999999999984 2 23333333332 223457788888 9999999
Q ss_pred CCcEEEEECCC----CceeEEecCCCCCeEEEEEeC---CEEEEEeCCCcEEEEECCCCceeEEEecCCC------Cce-
Q 008820 361 DRTIKAWSLLD----GTLSCTMSGHKSAVSTLAVCN---GVLYSGSRDGTIRLWSLSDHSLLTVLEEDSS------GAV- 426 (552)
Q Consensus 361 dg~i~iwd~~~----~~~~~~~~~h~~~v~~l~~~~---~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~------~~~- 426 (552)
|+.|++||+++ +.++..+ +|...|++++|++ .+|++++.|+.|++||+++++....+..+.. ..+
T Consensus 226 d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (383)
T 3ei3_B 226 DATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIK 304 (383)
T ss_dssp TSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEECCBCCCTTSCCCC
T ss_pred CCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCccccccccccccccccccceE
Confidence 99999999987 6666666 6999999999985 4999999999999999999887666654321 111
Q ss_pred --------EEEEEEcCCCCEEEEEECCCcEEEEeCC--cceeeeec--ccceEEEEEe--cCCEEEEEeCCCeEEEEecC
Q 008820 427 --------SSVLSLTAVQHTLVVSHESGSIKVWRND--KFMKSMQT--HKGSVFAVFL--EGKWLFTGGWDKTVSVQELA 492 (552)
Q Consensus 427 --------~~~~~~s~~~~~l~~g~~dg~i~iwd~~--~~~~~~~~--h~~~v~~v~~--~~~~l~sgs~dg~i~iwd~~ 492 (552)
...++++|++++ +|+.||.|++||.. +.+..+.+ |...+..++| ++++|++|+ ||.|++||++
T Consensus 305 ~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~~~~~l~~~~~~~~~~~~~~s~~g~~l~s~s-d~~i~iw~~~ 381 (383)
T 3ei3_B 305 ATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGGLVHQLRDPNAAGIISLNKFSPTGDVLASGM-GFNILIWNRE 381 (383)
T ss_dssp CEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCCEEEEECBTTBCSCCCEEEECTTSSEEEEEE-TTEEEEEECC
T ss_pred EeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCceeeeecCCCCCceEEEEEEecCccEEEEec-CCcEEEEecC
Confidence 112456666666 67789999999964 56677776 4566666565 899999998 9999999987
Q ss_pred C
Q 008820 493 G 493 (552)
Q Consensus 493 ~ 493 (552)
+
T Consensus 382 ~ 382 (383)
T 3ei3_B 382 D 382 (383)
T ss_dssp -
T ss_pred C
Confidence 5
No 97
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.97 E-value=1.8e-27 Score=230.95 Aligned_cols=260 Identities=17% Similarity=0.300 Sum_probs=204.1
Q ss_pred cceeeecCcceEEEeeCCCeEEEEE-----------eecCccceEEEEEc--CCEEEEEeCCCcEEEEeCCCCeEEEEEe
Q 008820 223 DQARAAGGVKDLVNGLSKGNVKFKD-----------LQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFK 289 (552)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~-----------l~~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~~~~~~~~ 289 (552)
+.+.+++++ .++.+ .++.+++|+ +.+|...|++++|+ +++|++|+.||+|++||+++++.+..+.
T Consensus 29 ~~l~WS~~~-~lAvg-~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~ 106 (318)
T 4ggc_A 29 NLVDWSSGN-VLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMT 106 (318)
T ss_dssp BCEEECTTS-EEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred eEEEECCCC-EEEEE-eCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEec
Confidence 334454432 34433 366677765 34788999999999 8999999999999999999999999999
Q ss_pred CCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEEC
Q 008820 290 GHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSL 369 (552)
Q Consensus 290 ~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~ 369 (552)
+|...+.++.+.+ .++++++.++.+++|+...... .+.....+.. ......+.++++++++++.||.|++||+
T Consensus 107 ~h~~~~~~~~~~~---~~l~s~~~~~~~~~~~~~~~~~--~~~~~~~~~~--~~~~~~~~~~~~~l~s~~~d~~i~iwd~ 179 (318)
T 4ggc_A 107 SHSARVGSLSWNS---YILSSGSRSGHIHHHDVRVAEH--HVATLSGHSQ--EVCGLRWAPDGRHLASGGNDNLVNVWPS 179 (318)
T ss_dssp CCSSCEEEEEEET---TEEEEEETTSEEEEEETTSSSC--EEEEEECCSS--CEEEEEECTTSSEEEEEETTSCEEEEES
T ss_pred CccceEEEeecCC---CEEEEEecCCceEeeecCCCce--eEEEEcCccC--ceEEEEEcCCCCEEEEEecCcceeEEEC
Confidence 9999998877643 4889999999999999876432 2222223222 2234567888999999999999999999
Q ss_pred CCCce----eEEecCCCCCeEEEEEe--C-CE--EEEEeCCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEE
Q 008820 370 LDGTL----SCTMSGHKSAVSTLAVC--N-GV--LYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLV 440 (552)
Q Consensus 370 ~~~~~----~~~~~~h~~~v~~l~~~--~-~~--l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~ 440 (552)
++++. ......|.+.|.++.+. + .. +++++.+++|++||.+........... ..+.. +.++++++.++
T Consensus 180 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~~~--~~v~~-~~~~~~~~~~~ 256 (318)
T 4ggc_A 180 APGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAH--SQVCS-ILWSPHYKELI 256 (318)
T ss_dssp SCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEECS--SCEEE-EEEETTTTEEE
T ss_pred CCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccccccccce--eeeee-eeecccccceE
Confidence 87653 44566788899999998 2 23 356778999999999998877766544 33444 68889988887
Q ss_pred EEE--CCCcEEEEeCC--cceeeeecccceEEEEEe--cCCEEEEEeCCCeEEEEecCCC
Q 008820 441 VSH--ESGSIKVWRND--KFMKSMQTHKGSVFAVFL--EGKWLFTGGWDKTVSVQELAGD 494 (552)
Q Consensus 441 ~g~--~dg~i~iwd~~--~~~~~~~~h~~~v~~v~~--~~~~l~sgs~dg~i~iwd~~~~ 494 (552)
+++ .|+.|++||.. +++..+.+|.+.|++++| ++++|+|||.||+|++||+.+.
T Consensus 257 ~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~~~ 316 (318)
T 4ggc_A 257 SGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFEL 316 (318)
T ss_dssp EEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCC
T ss_pred EEEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCC
Confidence 765 79999999964 578889999999999987 8999999999999999999653
No 98
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.97 E-value=5.3e-29 Score=241.94 Aligned_cols=233 Identities=23% Similarity=0.305 Sum_probs=183.5
Q ss_pred CCccccceeeecCcceEEEeeCCCeEEEEE-----------eecCccceEEEEEc----CCEEEEEeCCCcEEEEeCCCC
Q 008820 218 DGADIDQARAAGGVKDLVNGLSKGNVKFKD-----------LQGHRDCVTGLAVG----GGFLFSSSFDKSIHVWSLKDF 282 (552)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------l~~H~~~V~~l~~s----~~~l~s~s~dg~I~iwd~~~~ 282 (552)
+...+..+.+++.++.++++..++.+++|+ +.+|.++|++++|+ +++|+||+.|++|++||+.++
T Consensus 12 H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~ 91 (316)
T 3bg1_A 12 HEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENG 91 (316)
T ss_dssp --CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSS
T ss_pred ccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCC
Confidence 445688899999999999999999998886 45899999999996 689999999999999999887
Q ss_pred --eEEEEEeCCCCCeEEEEEecCC-CCEEEEEcCCCcEEEEeCCCCCCCccccccccCCCceeeeEEEEeeC--------
Q 008820 283 --SHVHTFKGHDHKVMAVVYVDED-QPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTS-------- 351 (552)
Q Consensus 283 --~~~~~~~~h~~~v~~v~~~~~~-~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 351 (552)
+....+.+|...|.+++|+|++ ..+|++|+.|++|++||++.............+.. . ....+++|+
T Consensus 92 ~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~-~-v~~~~~~~~~~~~~~~~ 169 (316)
T 3bg1_A 92 TWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTI-G-CNAVSWAPAVVPGSLID 169 (316)
T ss_dssp CCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSS-C-BCCCEECCCCCC-----
T ss_pred cceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccC-C-cceEEEccccCCccccc
Confidence 4677888999999999999974 56889999999999999986532211222222221 1 112345554
Q ss_pred ---------CCEEEEeeCCCcEEEEECCCC---ceeEEecCCCCCeEEEEEeC------CEEEEEeCCCcEEEEECCCC-
Q 008820 352 ---------GRYLYTGSGDRTIKAWSLLDG---TLSCTMSGHKSAVSTLAVCN------GVLYSGSRDGTIRLWSLSDH- 412 (552)
Q Consensus 352 ---------~~~l~sgs~dg~i~iwd~~~~---~~~~~~~~h~~~v~~l~~~~------~~l~s~~~dg~i~iwd~~~~- 412 (552)
+++|++|+.|+.|++||++.. +++..+.+|...|.+++|++ .+|++++.|++|++||+++.
T Consensus 170 ~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~ 249 (316)
T 3bg1_A 170 HPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDAS 249 (316)
T ss_dssp -CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTT
T ss_pred cccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCcc
Confidence 468999999999999999755 46677899999999999983 47999999999999999763
Q ss_pred --c-eeEEEecCCCCceEEEEEEcCCCCEEEEEECCCcEEEEeCC
Q 008820 413 --S-LLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRND 454 (552)
Q Consensus 413 --~-~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~ 454 (552)
+ ....+..+ ...+.. ++|+|++++|++++.||+|++|+..
T Consensus 250 ~~~~~~~~~~~~-~~~v~~-v~~sp~g~~las~~~D~~v~lw~~~ 292 (316)
T 3bg1_A 250 SNTWSPKLLHKF-NDVVWH-VSWSITANILAVSGGDNKVTLWKES 292 (316)
T ss_dssp CCCCBCCEEEEC-SSCEEE-EEECTTTCCEEEEESSSCEEEEEEC
T ss_pred ccchhhhhhhcC-CCcEEE-EEEcCCCCEEEEEcCCCeEEEEEEC
Confidence 1 12223333 455555 6999999999999999999999954
No 99
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.96 E-value=2.5e-27 Score=242.03 Aligned_cols=277 Identities=10% Similarity=0.067 Sum_probs=209.8
Q ss_pred cceEEEEEc--CCEEEEEeCCCcEEEEeCCCCe---EEEEEeC-------------------------------------
Q 008820 253 DCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFS---HVHTFKG------------------------------------- 290 (552)
Q Consensus 253 ~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~~---~~~~~~~------------------------------------- 290 (552)
.++.+++|+ |++|+++ .++.|++||+.+++ .+..+..
T Consensus 5 ~p~~~v~~s~dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (450)
T 2vdu_B 5 HPLQNLLTSRDGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGDS 83 (450)
T ss_dssp CCCCEEEECSSSSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC-----------------------------------
T ss_pred ccEEEEEecCCCCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCcc
Confidence 578899998 7755555 57799999999888 6666553
Q ss_pred -----------------CCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCC--CCCCCccccccccCCCceeeeEEEEeeC
Q 008820 291 -----------------HDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFS--FPLGHEPLKKWNEEKDWRYSGIHALTTS 351 (552)
Q Consensus 291 -----------------h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (552)
|.+.|.+++|+|++..++++++.||.|++||+. ++.....+.... +. ......+++|+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~-~~--~~v~~~~~sp~ 160 (450)
T 2vdu_B 84 IKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFC-FS--KRPNAISIAED 160 (450)
T ss_dssp ----------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEE-CS--SCEEEEEECTT
T ss_pred ccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeeccc-CC--CCceEEEEcCC
Confidence 333799999999888667999999999999998 554333332211 11 12234578889
Q ss_pred CCEEEEeeCCCcEEEEECCCCceeE----EecCCCCCeEEEEEe-C---C-EEEEEeCCCcEEEEECCCCceeEEEecCC
Q 008820 352 GRYLYTGSGDRTIKAWSLLDGTLSC----TMSGHKSAVSTLAVC-N---G-VLYSGSRDGTIRLWSLSDHSLLTVLEEDS 422 (552)
Q Consensus 352 ~~~l~sgs~dg~i~iwd~~~~~~~~----~~~~h~~~v~~l~~~-~---~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~ 422 (552)
+++|++|+.||.|++|++.+++... .+.+|...|++++|+ + + +|++++.|++|++||+++++.+..+...+
T Consensus 161 ~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h 240 (450)
T 2vdu_B 161 DTTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGH 240 (450)
T ss_dssp SSEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCC
T ss_pred CCEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCC
Confidence 9999999999999999998877554 778899999999999 5 5 89999999999999999999888865444
Q ss_pred CCceEEEEEEcCCCCEEEEEECCCcEEEEeCCc--ceeeeec-------------------------ccceEEEEEe--c
Q 008820 423 SGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDK--FMKSMQT-------------------------HKGSVFAVFL--E 473 (552)
Q Consensus 423 ~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~~--~~~~~~~-------------------------h~~~v~~v~~--~ 473 (552)
...+.+ ++|+ ++++|++|+.|+.|++||+.+ .+..+.. +...|.++.+ +
T Consensus 241 ~~~v~~-~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~ 318 (450)
T 2vdu_B 241 KHFVSS-ICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKN 318 (450)
T ss_dssp SSCEEE-EEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSS
T ss_pred CCceEE-EEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCC
Confidence 566666 6899 999999999999999999653 4445542 2345777776 7
Q ss_pred CCEEEEEe-CCCeEEEEec--CCC---eeeeeeccCCCcccCcceEEEEEeCCe-EEEEeC-------CCeEEEEEecCC
Q 008820 474 GKWLFTGG-WDKTVSVQEL--AGD---EFEEDVIPTGAIPCGSVITALLYWQGK-LFVGCA-------DRTVKIALCNRQ 539 (552)
Q Consensus 474 ~~~l~sgs-~dg~i~iwd~--~~~---~~~~~~~~~~~~~~~~~v~~l~~~~~~-l~s~s~-------Dg~v~iw~~~~~ 539 (552)
+++|++++ .|+.|++||+ .++ .....+.. ...|.+++|+++. +++.+. +..|.+|.++..
T Consensus 319 ~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~------~~~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~~~~~ 392 (450)
T 2vdu_B 319 LPFVAFFVEATKCIIILEMSEKQKGDLALKQIITF------PYNVISLSAHNDEFQVTLDNKESSGVQKNFAKFIEYNLN 392 (450)
T ss_dssp SSEEEEEETTCSEEEEEEECSSSTTCEEEEEEEEC------SSCEEEEEEETTEEEEEECCTTCCSSCCCSEEEEEEETT
T ss_pred CCEEEEEECCCCeEEEEEeccCCCCceeeccEecc------CCceEEEEecCCcEEEEEecccCCCCCCcceEEEEEEcC
Confidence 99999999 8999999999 443 23222222 3569999999876 444332 556899998754
Q ss_pred cc
Q 008820 540 IP 541 (552)
Q Consensus 540 ~~ 541 (552)
..
T Consensus 393 ~~ 394 (450)
T 2vdu_B 393 EN 394 (450)
T ss_dssp TT
T ss_pred CC
Confidence 43
No 100
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.96 E-value=1.9e-27 Score=235.59 Aligned_cols=267 Identities=13% Similarity=0.128 Sum_probs=201.4
Q ss_pred CccccceeeecCcceEEEeeCCC-------eEEEEE-------------------eecCccceEEEEEcCCEEEEEe---
Q 008820 219 GADIDQARAAGGVKDLVNGLSKG-------NVKFKD-------------------LQGHRDCVTGLAVGGGFLFSSS--- 269 (552)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~-------------------l~~H~~~V~~l~~s~~~l~s~s--- 269 (552)
+.++.++.|++++..++++..+. ++++|+ |.+|.+.|.+++++++.+++|+
T Consensus 14 g~PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~~~~~~~g~~~~ 93 (365)
T 4h5i_A 14 GYPAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDASKGIILVGCNEN 93 (365)
T ss_dssp SSCEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEETTEEEEECCCC
T ss_pred CCCEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeCCCEEEEEECCC
Confidence 45688999999999999886432 477776 3578889999999988888764
Q ss_pred --------CCCcEEEEeCCCCeE----EEEE-----eCCCCCeEEEEEecCCCCEE-EEEcCCCcEEEEeCCCCCCCccc
Q 008820 270 --------FDKSIHVWSLKDFSH----VHTF-----KGHDHKVMAVVYVDEDQPLC-ISGDSGGGIFVWSFSFPLGHEPL 331 (552)
Q Consensus 270 --------~dg~I~iwd~~~~~~----~~~~-----~~h~~~v~~v~~~~~~~~~l-~s~~~dg~i~vwd~~~~~~~~~~ 331 (552)
.|+++|+|++.+... .... ..+...+.+++|+|++..++ ++++.|++|++||+.+......+
T Consensus 94 ~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~ 173 (365)
T 4h5i_A 94 STKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEI 173 (365)
T ss_dssp HHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEE
T ss_pred ccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEe
Confidence 477899998765432 1222 12455689999999888664 45667999999999876544333
Q ss_pred cccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCceeEE--ecCCCCCeEEEEEe-CC-EEEEEeCCC----c
Q 008820 332 KKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCT--MSGHKSAVSTLAVC-NG-VLYSGSRDG----T 403 (552)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~--~~~h~~~v~~l~~~-~~-~l~s~~~dg----~ 403 (552)
. +.. . ....+|+|+++++++++.+ .+.+|+..+++.+.. ...|...|.+++|+ ++ .+++++.|+ .
T Consensus 174 ~----~~~-~-V~~v~fspdg~~l~s~s~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~ 246 (365)
T 4h5i_A 174 E----TRG-E-VKDLHFSTDGKVVAYITGS-SLEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIV 246 (365)
T ss_dssp E----CSS-C-CCEEEECTTSSEEEEECSS-CEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEE
T ss_pred C----CCC-c-eEEEEEccCCceEEeccce-eEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeE
Confidence 2 111 1 2345889999999999855 577787777776543 45688899999999 44 888888887 6
Q ss_pred EEEEECCCCcee----EEEecCCCCceEEEEEEcCCCCEEEEEECCCcEEEEeCCc--ceee-eecccceEEEEEe--cC
Q 008820 404 IRLWSLSDHSLL----TVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDK--FMKS-MQTHKGSVFAVFL--EG 474 (552)
Q Consensus 404 i~iwd~~~~~~~----~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~~--~~~~-~~~h~~~v~~v~~--~~ 474 (552)
++.||+...... ..+..+ ...+.+ ++|+|+|++|++|+.|++|+|||..+ ++.. +.+|...|++++| ||
T Consensus 247 i~~~~~~~~~~~~~~~~~~~~~-~~~V~~-~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg 324 (365)
T 4h5i_A 247 LTKISIKSGNTSVLRSKQVTNR-FKGITS-MDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDS 324 (365)
T ss_dssp EEEEEEETTEEEEEEEEEEESS-CSCEEE-EEECTTSCEEEEEETTSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTS
T ss_pred EeecccccceecceeeeeecCC-CCCeEe-EEECCCCCceEEEcCCCEEEEEECCCCcEEEEecCcccCCEEEEEECCCC
Confidence 889998776542 333433 344554 69999999999999999999999754 5555 4789999999987 99
Q ss_pred CEEEEEeCCCeEEEEecCCC
Q 008820 475 KWLFTGGWDKTVSVQELAGD 494 (552)
Q Consensus 475 ~~l~sgs~dg~i~iwd~~~~ 494 (552)
++|+|||.|++|+|||+...
T Consensus 325 ~~laS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 325 TYVASVSAANTIHIIKLPLN 344 (365)
T ss_dssp CEEEEEETTSEEEEEECCTT
T ss_pred CEEEEEeCCCeEEEEEcCCC
Confidence 99999999999999999643
No 101
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.96 E-value=4.2e-28 Score=246.24 Aligned_cols=252 Identities=14% Similarity=0.206 Sum_probs=204.1
Q ss_pred CCCeEEEEEeecCccceEEEEEc---CCEEEEEeCCCcEEEEeCCC----------CeEEEEEeCCCCCeEEEEEecCCC
Q 008820 239 SKGNVKFKDLQGHRDCVTGLAVG---GGFLFSSSFDKSIHVWSLKD----------FSHVHTFKGHDHKVMAVVYVDEDQ 305 (552)
Q Consensus 239 ~~~~~~~~~l~~H~~~V~~l~~s---~~~l~s~s~dg~I~iwd~~~----------~~~~~~~~~h~~~v~~v~~~~~~~ 305 (552)
..+.+.+....+|.+.|++++|+ +.+|++++.||.|++||+.+ .+.+..+.+|...|.+++|+|++.
T Consensus 115 ~~~~~~~~~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~ 194 (430)
T 2xyi_A 115 VCGKIEIEIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLN 194 (430)
T ss_dssp ---CEEEEEEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTST
T ss_pred CCCceEEEEEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCC
Confidence 34556667788999999999998 46899999999999999986 677888999999999999999888
Q ss_pred CEEEEEcCCCcEEEEeCCCCCCCcc----ccccccCCCceeeeEEEEee-CCCEEEEeeCCCcEEEEECCCC---ceeEE
Q 008820 306 PLCISGDSGGGIFVWSFSFPLGHEP----LKKWNEEKDWRYSGIHALTT-SGRYLYTGSGDRTIKAWSLLDG---TLSCT 377 (552)
Q Consensus 306 ~~l~s~~~dg~i~vwd~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~-~~~~l~sgs~dg~i~iwd~~~~---~~~~~ 377 (552)
.+|++|+.||.|++||+........ ...+..+.. .....++++ ++..|++++.||.|++||++++ +.+..
T Consensus 195 ~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~--~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~ 272 (430)
T 2xyi_A 195 GYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTA--VVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHT 272 (430)
T ss_dssp TEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSS--CEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEE
T ss_pred CeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCC--CEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeE
Confidence 7999999999999999987433211 222222222 122346667 5679999999999999999987 57778
Q ss_pred ecCCCCCeEEEEEe--CC-EEEEEeCCCcEEEEECCC-CceeEEEecCCCCceEEEEEEcCCCC-EEEEEECCCcEEEEe
Q 008820 378 MSGHKSAVSTLAVC--NG-VLYSGSRDGTIRLWSLSD-HSLLTVLEEDSSGAVSSVLSLTAVQH-TLVVSHESGSIKVWR 452 (552)
Q Consensus 378 ~~~h~~~v~~l~~~--~~-~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~s~~~~-~l~~g~~dg~i~iwd 452 (552)
+..|...|++++|+ +. ++++|+.||.|++||+++ ...+..+..+ ...+.+ +.|+|+++ ++++++.||.|++||
T Consensus 273 ~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h-~~~v~~-i~~sp~~~~~l~s~~~d~~i~iwd 350 (430)
T 2xyi_A 273 VDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESH-KDEIFQ-VQWSPHNETILASSGTDRRLHVWD 350 (430)
T ss_dssp EECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECC-SSCEEE-EEECSSCTTEEEEEETTSCCEEEE
T ss_pred eecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecC-CCCEEE-EEECCCCCCEEEEEeCCCcEEEEe
Confidence 88999999999999 23 799999999999999998 5567777765 445555 69999984 799999999999999
Q ss_pred CCc----------------ceeeeecccceEEEEEe--cCC-EEEEEeCCCeEEEEecCCC
Q 008820 453 NDK----------------FMKSMQTHKGSVFAVFL--EGK-WLFTGGWDKTVSVQELAGD 494 (552)
Q Consensus 453 ~~~----------------~~~~~~~h~~~v~~v~~--~~~-~l~sgs~dg~i~iwd~~~~ 494 (552)
+.. .+..+.+|...|.++.| ++. +|++++.||.|++|++...
T Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~~ 411 (430)
T 2xyi_A 351 LSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAEN 411 (430)
T ss_dssp GGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECHH
T ss_pred CCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEcccc
Confidence 653 44566789999999988 666 8999999999999999754
No 102
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.96 E-value=1.2e-27 Score=236.34 Aligned_cols=278 Identities=11% Similarity=0.129 Sum_probs=199.9
Q ss_pred EEEEeecCccceEEEEEc--CCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEe
Q 008820 244 KFKDLQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWS 321 (552)
Q Consensus 244 ~~~~l~~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd 321 (552)
.+..+.+|.+.|++++|+ +++|++|+.|+ +++||+++++.......+ .+..+++.++++.++++++.|++|++||
T Consensus 11 ~~~~~~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~d~~v~iWd 87 (355)
T 3vu4_A 11 PIVPENHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAHIMSQEMR--HLSKVRMLHRTNYVAFVTGVKEVVHIWD 87 (355)
T ss_dssp --------CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEEEEEEEECS--CCCEEEECTTSSEEEEECSSTTEEEEEE
T ss_pred CccccccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCcceeeeeecC--CeEEEEEcCCCCEEEEEECCccEEEEEE
Confidence 455678999999999999 89999988775 889999988776655433 4778888887776778889999999999
Q ss_pred CCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCC-ceeEEecCCCCCeEEEEEeCCEEEE--E
Q 008820 322 FSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDG-TLSCTMSGHKSAVSTLAVCNGVLYS--G 398 (552)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~-~~~~~~~~h~~~v~~l~~~~~~l~s--~ 398 (552)
+.+++....+. .. ..+.++..+++.++++. |+.|++||+.++ +.+..+.. +...++++.+.+++ |
T Consensus 88 ~~~~~~~~~~~---~~-----~~v~~v~~~~~~~~~~~-~~~i~i~d~~~~~~~~~~~~~---~~~~~~~s~~~la~~sg 155 (355)
T 3vu4_A 88 DVKKQDVSRIK---VD-----APVKDLFLSREFIVVSY-GDVISVFKFGNPWKRITDDIR---FGGVCEFSNGLLVYSNE 155 (355)
T ss_dssp TTTTEEEEEEE---CS-----SCEEEEEECSSEEEEEE-TTEEEEEESSTTCCBSSCCEE---EEEEEEEETTEEEEEES
T ss_pred CCCCcEEEEEE---CC-----CceEEEEEcCCEEEEEE-cCEEEEEECCCCceeeEEecc---CCceEEEEccEEEEeCC
Confidence 98765433322 11 13556666777666654 689999999988 66666554 34445556676666 5
Q ss_pred eCCCcEEEEECCCCc----------------eeEEEecCCCCceEEEEEEcCCCCEEEEEECCCc-EEEEeCC--cceee
Q 008820 399 SRDGTIRLWSLSDHS----------------LLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGS-IKVWRND--KFMKS 459 (552)
Q Consensus 399 ~~dg~i~iwd~~~~~----------------~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~-i~iwd~~--~~~~~ 459 (552)
+.||.|++||+++++ .+..+..| .+.+.+ ++|+|++++|++|+.||+ |++||.. +.+..
T Consensus 156 ~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h-~~~v~~-~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~ 233 (355)
T 3vu4_A 156 FNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAH-TNPIKM-VRLNRKSDMVATCSQDGTIIRVFKTEDGVLVRE 233 (355)
T ss_dssp SCTTCEEEEECCC------------------CCEEECCC-SSCEEE-EEECTTSSEEEEEETTCSEEEEEETTTCCEEEE
T ss_pred CcCcEEEEEECCCCCccccccccccccccCcccEEEEcc-CCceEE-EEECCCCCEEEEEeCCCCEEEEEECCCCcEEEE
Confidence 899999999999865 15666655 455555 699999999999999998 9999965 56777
Q ss_pred ee-c-ccceEEEEEe--cCCEEEEEeCCCeEEEEecCCCeeeeeeccCC------------------CcccCcceEEEEE
Q 008820 460 MQ-T-HKGSVFAVFL--EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTG------------------AIPCGSVITALLY 517 (552)
Q Consensus 460 ~~-~-h~~~v~~v~~--~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~------------------~~~~~~~v~~l~~ 517 (552)
+. + |...|.+++| ++++|++++.|++|++||+............. ..........++|
T Consensus 234 ~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 313 (355)
T 3vu4_A 234 FRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAW 313 (355)
T ss_dssp EECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEE
T ss_pred EEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCceEEEE
Confidence 77 5 9999999987 89999999999999999997653211100000 0001122366888
Q ss_pred eC-C-eEEEEeCCCeEEEEEecC
Q 008820 518 WQ-G-KLFVGCADRTVKIALCNR 538 (552)
Q Consensus 518 ~~-~-~l~s~s~Dg~v~iw~~~~ 538 (552)
++ + .+++++.||.+++|++..
T Consensus 314 ~~d~~~l~~~~~dg~~~~~~~~~ 336 (355)
T 3vu4_A 314 ISESSLVVVWPHTRMIETFKVVF 336 (355)
T ss_dssp SSSSEEEEEETTTTEEEEEEEEE
T ss_pred eCCCCEEEEEeCCCeEEEEEEEc
Confidence 84 3 599999999999999874
No 103
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.96 E-value=7.3e-27 Score=229.18 Aligned_cols=262 Identities=15% Similarity=0.102 Sum_probs=214.8
Q ss_pred CCCccccceeeecCcceEEEeeCCCeEEEEEe------------ecCccceEEEEEc--CC-EEEEEeCCCcEEEEeC-C
Q 008820 217 SDGADIDQARAAGGVKDLVNGLSKGNVKFKDL------------QGHRDCVTGLAVG--GG-FLFSSSFDKSIHVWSL-K 280 (552)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l------------~~H~~~V~~l~~s--~~-~l~s~s~dg~I~iwd~-~ 280 (552)
.+...+..+.+++.+..++++..++.+.+|++ .+|...|++++|+ ++ +|++|+.||.|++||+ .
T Consensus 9 ~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~ 88 (342)
T 1yfq_A 9 APKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIG 88 (342)
T ss_dssp CCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSS
T ss_pred CCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEecc
Confidence 34456888899999999999999999998874 3688999999998 88 9999999999999999 8
Q ss_pred CCeEEEEEeC--CCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCC---------CCCCccccccccCCCceeeeEEEEe
Q 008820 281 DFSHVHTFKG--HDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSF---------PLGHEPLKKWNEEKDWRYSGIHALT 349 (552)
Q Consensus 281 ~~~~~~~~~~--h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (552)
+++. ..+.+ |...|.+++|+| ..++++++.|+.|++||+++ ......+. + ...+.++.
T Consensus 89 ~~~~-~~~~~~~~~~~v~~l~~~~--~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~----~----~~~v~~~~ 157 (342)
T 1yfq_A 89 SPSF-QALTNNEANLGICRICKYG--DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK----V----KNKIFTMD 157 (342)
T ss_dssp SSSE-EECBSCCCCSCEEEEEEET--TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS----S----CCCEEEEE
T ss_pred CCce-EeccccCCCCceEEEEeCC--CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe----e----CCceEEEE
Confidence 7765 77788 999999999999 55889999999999999885 33222222 1 12344555
Q ss_pred eCCCEEEEeeCCCcEEEEECCC-Cc--eeEEecCCCCCeEEEEEeC---CEEEEEeCCCcEEEEECCCC------ceeEE
Q 008820 350 TSGRYLYTGSGDRTIKAWSLLD-GT--LSCTMSGHKSAVSTLAVCN---GVLYSGSRDGTIRLWSLSDH------SLLTV 417 (552)
Q Consensus 350 ~~~~~l~sgs~dg~i~iwd~~~-~~--~~~~~~~h~~~v~~l~~~~---~~l~s~~~dg~i~iwd~~~~------~~~~~ 417 (552)
.+++.+++++.|+.|++||+++ +. .......|...|.+++|++ .++++++.||.|++||++.. +....
T Consensus 158 ~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~ 237 (342)
T 1yfq_A 158 TNSSRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFA 237 (342)
T ss_dssp ECSSEEEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEE
T ss_pred ecCCcEEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCccccccccee
Confidence 5555699999999999999988 54 3345567889999999985 39999999999999999887 77777
Q ss_pred EecCCC--------CceEEEEEEcCCCCEEEEEECCCcEEEEeCC--cceeeeecc-cceEEEEEecCCEEEEEeCCCe-
Q 008820 418 LEEDSS--------GAVSSVLSLTAVQHTLVVSHESGSIKVWRND--KFMKSMQTH-KGSVFAVFLEGKWLFTGGWDKT- 485 (552)
Q Consensus 418 ~~~~~~--------~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~--~~~~~~~~h-~~~v~~v~~~~~~l~sgs~dg~- 485 (552)
+..+.. ..+.+ ++|+|++++|++++.||.|++||.. +.+..+.+| ...|.++.+++++|++++.||.
T Consensus 238 ~~~~~~~~~~~~~~~~i~~-~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~l~s~s~Dg~~ 316 (342)
T 1yfq_A 238 FRCHRLNLKDTNLAYPVNS-IEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKIACSDNILCLATSDDTF 316 (342)
T ss_dssp EECCCCCTTCCSSCCCEEE-EEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSSEEEEEEECSSEEEEEEECTHH
T ss_pred eecccccccccccceeEEE-EEEcCCCCEEEEecCCceEEEEcCccHhHhhhhhcccCCCceEecCCCCeEEEEecCCcc
Confidence 776632 24444 6999999999999999999999965 467778888 9999999999999999999998
Q ss_pred EEEEe
Q 008820 486 VSVQE 490 (552)
Q Consensus 486 i~iwd 490 (552)
.+.|.
T Consensus 317 ~~~~~ 321 (342)
T 1yfq_A 317 KTNAA 321 (342)
T ss_dssp HHCSS
T ss_pred ccccc
Confidence 55554
No 104
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.96 E-value=4.2e-28 Score=246.65 Aligned_cols=269 Identities=15% Similarity=0.159 Sum_probs=198.8
Q ss_pred ccccceeeec-CcceEEEeeCCCeEEEEEe-----------ecCccceEEEEEc---CCEEEEEeCCCcEEEEeCCCCeE
Q 008820 220 ADIDQARAAG-GVKDLVNGLSKGNVKFKDL-----------QGHRDCVTGLAVG---GGFLFSSSFDKSIHVWSLKDFSH 284 (552)
Q Consensus 220 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l-----------~~H~~~V~~l~~s---~~~l~s~s~dg~I~iwd~~~~~~ 284 (552)
..+.++.+.+ ....++++..++.+.+|++ .+|.++|++++|+ +++|+||+.||+|++||++++..
T Consensus 120 ~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~ 199 (435)
T 4e54_B 120 RRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNIL 199 (435)
T ss_dssp SCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEE
T ss_pred CCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCce
Confidence 3477888887 4567889999999999973 4799999999997 78999999999999999987655
Q ss_pred EEEEeC--CCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCccccccccCCCceeeeEEEEeeCCC-EEEEeeCC
Q 008820 285 VHTFKG--HDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGR-YLYTGSGD 361 (552)
Q Consensus 285 ~~~~~~--h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~sgs~d 361 (552)
...... +...+.+++|+|++. ++++|+.||.|++||++.. .+..+..+... ....+++|+++ ++++|+.|
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~-~l~~g~~dg~i~~wd~~~~----~~~~~~~h~~~--v~~v~~~p~~~~~~~s~s~d 272 (435)
T 4e54_B 200 RVFASSDTINIWFCSLDVSASSR-MVVTGDNVGNVILLNMDGK----ELWNLRMHKKK--VTHVALNPCCDWFLATASVD 272 (435)
T ss_dssp EEEECCSSCSCCCCCEEEETTTT-EEEEECSSSBEEEEESSSC----BCCCSBCCSSC--EEEEEECTTCSSEEEEEETT
T ss_pred eEEeccCCCCccEEEEEECCCCC-EEEEEeCCCcEeeeccCcc----eeEEEecccce--EEeeeecCCCceEEEEecCc
Confidence 443333 344678999999654 8899999999999998742 22333333321 22346777766 88899999
Q ss_pred CcEEEEECCCCceeEE---ecCCCCCeEEEEEe--CCEEEEEeCCCcEEEEECCCCceeEEEecCCCCc----eEEEEEE
Q 008820 362 RTIKAWSLLDGTLSCT---MSGHKSAVSTLAVC--NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGA----VSSVLSL 432 (552)
Q Consensus 362 g~i~iwd~~~~~~~~~---~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~----~~~~~~~ 432 (552)
+.|++||+++.+.... ..+|...|++++|+ +.+|++++.||+|++||+++++....+..+.... ......+
T Consensus 273 ~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (435)
T 4e54_B 273 QTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLIPHPHRHFQHLTPIKAAW 352 (435)
T ss_dssp SBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEECCCCCCCCSSSCCCBCEE
T ss_pred ceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceEEecccccccccceeEEEEE
Confidence 9999999988765443 35799999999999 3499999999999999999998877765443211 0111356
Q ss_pred cCCCCEEEEEE------------CCCcEEEEeCC--cceeee-ecccceEEEE---EecCCEEEEEeCCCeEEEEecCCC
Q 008820 433 TAVQHTLVVSH------------ESGSIKVWRND--KFMKSM-QTHKGSVFAV---FLEGKWLFTGGWDKTVSVQELAGD 494 (552)
Q Consensus 433 s~~~~~l~~g~------------~dg~i~iwd~~--~~~~~~-~~h~~~v~~v---~~~~~~l~sgs~dg~i~iwd~~~~ 494 (552)
++++..++++. .++.|++||.. +.+..+ .+|...|.++ +++|.+|++|+ |+.|+|||++++
T Consensus 353 ~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~~v~s~~~fspdg~~lasg~-d~~i~iW~~~~g 431 (435)
T 4e54_B 353 HPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPESSGISSLNEFNPMGDTLASAM-GYHILIWSQQEA 431 (435)
T ss_dssp CSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSSCCCCCCEEEECTTSSCEEEEC-SSEEEECCCC--
T ss_pred cCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCCCCcEEEEEEECCCCCEEEEEc-CCcEEEEECCcC
Confidence 67776666654 23579999965 344444 4677777665 34899999876 889999999887
Q ss_pred ee
Q 008820 495 EF 496 (552)
Q Consensus 495 ~~ 496 (552)
+.
T Consensus 432 k~ 433 (435)
T 4e54_B 432 RT 433 (435)
T ss_dssp --
T ss_pred ee
Confidence 54
No 105
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.96 E-value=3.7e-27 Score=231.25 Aligned_cols=244 Identities=18% Similarity=0.177 Sum_probs=188.8
Q ss_pred EEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCC-ccccccccCCCceeeeEEEEee--CCCEEEEeeCCC
Q 008820 286 HTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGH-EPLKKWNEEKDWRYSGIHALTT--SGRYLYTGSGDR 362 (552)
Q Consensus 286 ~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~l~sgs~dg 362 (552)
..+.+|.+.|++++|+|++. +|++|+.||.|++||+.+.... .....+..+.. . ....++++ ++++|++|+.||
T Consensus 5 ~~~~gH~~~v~~~~~~~~~~-~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~-~-v~~~~~~~~~d~~~l~s~~~dg 81 (351)
T 3f3f_A 5 PFDSGHDDLVHDVVYDFYGR-HVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDS-S-IVAIDWASPEYGRIIASASYDK 81 (351)
T ss_dssp CEECCCSSCEEEEEECSSSS-EEEEEETTSEEEEEEECSSSCCEEEEEEEECCSS-C-EEEEEECCGGGCSEEEEEETTS
T ss_pred ccCcccccceeEEEEcCCCC-EEEEeeCCCeEEEEECCCCCCcceecceeccCCC-c-EEEEEEcCCCCCCEEEEEcCCC
Confidence 34678999999999999655 7899999999999999865433 22233333332 1 22345666 588999999999
Q ss_pred cEEEEECCCC---------ceeEEecCCCCCeEEEEEe-C--C-EEEEEeCCCcEEEEECCCCceeEEEec---------
Q 008820 363 TIKAWSLLDG---------TLSCTMSGHKSAVSTLAVC-N--G-VLYSGSRDGTIRLWSLSDHSLLTVLEE--------- 420 (552)
Q Consensus 363 ~i~iwd~~~~---------~~~~~~~~h~~~v~~l~~~-~--~-~l~s~~~dg~i~iwd~~~~~~~~~~~~--------- 420 (552)
.|++||++++ +.+..+..|...|.+++|+ + + ++++++.||.|++||+++++.+..+..
T Consensus 82 ~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~ 161 (351)
T 3f3f_A 82 TVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSI 161 (351)
T ss_dssp CEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSC
T ss_pred eEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhcccccccccccccc
Confidence 9999999887 5678888999999999999 3 4 899999999999999998875443321
Q ss_pred ---CCCCceEEEEEEcCC---CCEEEEEECCCcEEEEeCCc----ceeeeecccceEEEEEe--cC----CEEEEEeCCC
Q 008820 421 ---DSSGAVSSVLSLTAV---QHTLVVSHESGSIKVWRNDK----FMKSMQTHKGSVFAVFL--EG----KWLFTGGWDK 484 (552)
Q Consensus 421 ---~~~~~~~~~~~~s~~---~~~l~~g~~dg~i~iwd~~~----~~~~~~~h~~~v~~v~~--~~----~~l~sgs~dg 484 (552)
.+...+.+ +.++|+ +..+++++.++.+.+|+... ....+.+|...|.++.| ++ ++|++|+.||
T Consensus 162 ~~~~~~~~~~~-~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg 240 (351)
T 3f3f_A 162 PPANHLQSDFC-LSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDG 240 (351)
T ss_dssp CCSSCSCCCEE-EEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTS
T ss_pred ccCCcccceeE-EEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCC
Confidence 22333444 689987 89999999999998887442 36677889999999988 55 7999999999
Q ss_pred eEEEEecCCCe----------------------------------------------eeeeeccCCCcccCcceEEEEEe
Q 008820 485 TVSVQELAGDE----------------------------------------------FEEDVIPTGAIPCGSVITALLYW 518 (552)
Q Consensus 485 ~i~iwd~~~~~----------------------------------------------~~~~~~~~~~~~~~~~v~~l~~~ 518 (552)
.|++||+.++. ...... .+...|++++|+
T Consensus 241 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~h~~~v~~~~~s 315 (351)
T 3f3f_A 241 RIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHD-----DHNGEVWSVSWN 315 (351)
T ss_dssp CEEEEEEEECC---------------------------------------CCSEEEEEEEEEC-----TTSSCEEEEEEC
T ss_pred eEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEe-----cccccEEEEEEc
Confidence 99999997641 111111 236679999999
Q ss_pred CC--eEEEEeCCCeEEEEEecC
Q 008820 519 QG--KLFVGCADRTVKIALCNR 538 (552)
Q Consensus 519 ~~--~l~s~s~Dg~v~iw~~~~ 538 (552)
++ .|++|+.||.|++|+++.
T Consensus 316 ~~~~~l~s~~~dg~v~iw~~~~ 337 (351)
T 3f3f_A 316 LTGTILSSAGDDGKVRLWKATY 337 (351)
T ss_dssp SSSCCEEEEETTSCEEEEEECT
T ss_pred CCCCEEEEecCCCcEEEEecCc
Confidence 53 599999999999999984
No 106
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1.9e-27 Score=233.85 Aligned_cols=265 Identities=13% Similarity=0.042 Sum_probs=194.4
Q ss_pred CCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCC------CCccccccc
Q 008820 262 GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPL------GHEPLKKWN 335 (552)
Q Consensus 262 ~~~l~s~s~dg~I~iwd~~~~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~------~~~~~~~~~ 335 (552)
+.++++|+.||+|++||+.+++.+..+. ...|.++.|+|. +++++.|++|++|+..... ....+..+.
T Consensus 48 ~~~l~sg~~Dg~v~iwd~~~~~~~~~~~--~~~v~~~~~~~~----~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~ 121 (343)
T 3lrv_A 48 KWVCMCRCEDGALHFTQLKDSKTITTIT--TPNPRTGGEHPA----IISRGPCNRLLLLYPGNQITILDSKTNKVLREIE 121 (343)
T ss_dssp EEEEEEEEETTEEEEEEESSSSCEEEEE--EECCCTTCCCCS----EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEE
T ss_pred CCEEEEECCCCcEEEEECCCCcEEEEEe--cCCceeeeeCCc----eEEecCCCeEEEEEccCceEEeecCCcceeEEee
Confidence 7899999999999999999999888887 467888888876 8999999999999876321 111122222
Q ss_pred cCCCceeeeEEEEee--CCCEEEEeeCCCcEEEEECCCCceeEEec-CCCCCeEEEEEe--CCEEEEEeCCCcEEEEECC
Q 008820 336 EEKDWRYSGIHALTT--SGRYLYTGSGDRTIKAWSLLDGTLSCTMS-GHKSAVSTLAVC--NGVLYSGSRDGTIRLWSLS 410 (552)
Q Consensus 336 ~~~~~~~~~~~~~~~--~~~~l~sgs~dg~i~iwd~~~~~~~~~~~-~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~ 410 (552)
..+.. .....+++| +++++++|+.||+|++||+++++...... .|...|++++|+ +.++++|+.||.|++||++
T Consensus 122 ~~~~~-~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~ 200 (343)
T 3lrv_A 122 VDSAN-EIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLS 200 (343)
T ss_dssp CCCSS-CEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESS
T ss_pred cCCCC-CEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECC
Confidence 11111 123346777 88899999999999999999999877664 455689999999 3499999999999999999
Q ss_pred CCcee-EEEecCCCCceEEEEEEcCCCCEEEEEECCCcEEEEeCCcc--eeeee---cccceEE--EEEe--cCCEEEEE
Q 008820 411 DHSLL-TVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDKF--MKSMQ---THKGSVF--AVFL--EGKWLFTG 480 (552)
Q Consensus 411 ~~~~~-~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~~~--~~~~~---~h~~~v~--~v~~--~~~~l~sg 480 (552)
+++.+ ..+...|.+.+.+ ++|+|++.+|++++ |+.|++||+++. ...+. .|...+. +++| ++++|+++
T Consensus 201 ~~~~~~~~~~~~h~~~v~~-l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~ 278 (343)
T 3lrv_A 201 SPDQASSRFPVDEEAKIKE-VKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAY 278 (343)
T ss_dssp CTTSCCEECCCCTTSCEEE-EEECTTSSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEE
T ss_pred CCCCCccEEeccCCCCEEE-EEEeCCCCEEEEEe-CCeEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEEEe
Confidence 99987 7777634566666 69999999999999 459999997653 23333 2334432 3554 89999999
Q ss_pred eC-CCeEEEEecCCCeeeeeeccCCCcccCcceEEEEEeC-----CeEEEEeCCCeEEEEEecCCcceeE
Q 008820 481 GW-DKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQ-----GKLFVGCADRTVKIALCNRQIPEIF 544 (552)
Q Consensus 481 s~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~~-----~~l~s~s~Dg~v~iw~~~~~~~~~~ 544 (552)
+. |+.|++|++......... ..+..+.|++ ..+++++.||.++++-.....-.+.
T Consensus 279 s~~d~~i~v~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~~~~~~i~ 339 (343)
T 3lrv_A 279 SNESNSLTIYKFDKKTKNWTK---------DEESALCLQSDTADFTDMDVVCGDGGIAAILKTNDSFNIV 339 (343)
T ss_dssp ETTTTEEEEEEECTTTCSEEE---------EEEEECCC----CCCCEEEEEEETTEEEEEEECSSEEEEE
T ss_pred cCCCCcEEEEEEcccccceEe---------cCceeEecCccccccceeEEEecCCceEEEEecCCeEeEE
Confidence 98 999999999765433221 3456666664 3488999999999987764443333
No 107
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.96 E-value=4.7e-28 Score=262.92 Aligned_cols=245 Identities=17% Similarity=0.228 Sum_probs=189.9
Q ss_pred EEeecCccceEEEEEc--CCEEEEEeCCCcEEEEeCC--CCeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEe
Q 008820 246 KDLQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLK--DFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWS 321 (552)
Q Consensus 246 ~~l~~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~--~~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd 321 (552)
..+.+|.++|++++|+ +++|++|+.||+|++||+. +++.+..+.+|.+.|.+++|+|+.
T Consensus 3 ~~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~----------------- 65 (753)
T 3jro_A 3 VIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPK----------------- 65 (753)
T ss_dssp -----CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTT-----------------
T ss_pred eecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCC-----------------
Confidence 3578999999999999 8999999999999999998 567788899999999999998752
Q ss_pred CCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCc--eeEEecCCCCCeEEEEEe-C--C-EE
Q 008820 322 FSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGT--LSCTMSGHKSAVSTLAVC-N--G-VL 395 (552)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~--~~~~~~~h~~~v~~l~~~-~--~-~l 395 (552)
++++|++|+.||.|++||+.+++ .+..+.+|...|++++|+ + + .+
T Consensus 66 -----------------------------~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l 116 (753)
T 3jro_A 66 -----------------------------FGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLL 116 (753)
T ss_dssp -----------------------------SCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEE
T ss_pred -----------------------------CCCEEEEEeCCCeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEE
Confidence 12345555556666666665554 566778899999999999 3 3 99
Q ss_pred EEEeCCCcEEEEECCCCce--eEEEecCCCCceEEEEEEcC-------------CCCEEEEEECCCcEEEEeCC------
Q 008820 396 YSGSRDGTIRLWSLSDHSL--LTVLEEDSSGAVSSVLSLTA-------------VQHTLVVSHESGSIKVWRND------ 454 (552)
Q Consensus 396 ~s~~~dg~i~iwd~~~~~~--~~~~~~~~~~~~~~~~~~s~-------------~~~~l~~g~~dg~i~iwd~~------ 454 (552)
++|+.||.|++||++++.. ...+..+ ...+.+ +.|+| ++.++++|+.||.|++||.+
T Consensus 117 ~sgs~dg~I~vwdl~~~~~~~~~~~~~~-~~~v~~-l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~ 194 (753)
T 3jro_A 117 LVASSDGKVSVVEFKENGTTSPIIIDAH-AIGVNS-ASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTY 194 (753)
T ss_dssp EEEETTSEEEEEECCSSSCCCCEEEECC-SSCEEE-EEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEE
T ss_pred EEEeCCCcEEEEEeecCCCcceeEeecC-CCceEE-EEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccc
Confidence 9999999999999988743 3344433 444555 68888 58999999999999999964
Q ss_pred cceeeeecccceEEEEEe--c---CCEEEEEeCCCeEEEEecCCCeeeeeeccCCCcccCcceEEEEEeCC--eEEEEeC
Q 008820 455 KFMKSMQTHKGSVFAVFL--E---GKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQG--KLFVGCA 527 (552)
Q Consensus 455 ~~~~~~~~h~~~v~~v~~--~---~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~--~l~s~s~ 527 (552)
.....+.+|...|.++.| + +.+|++|+.||.|++||+.++.............+...|.+++|+++ .+++|+.
T Consensus 195 ~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~ 274 (753)
T 3jro_A 195 VLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGG 274 (753)
T ss_dssp EEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECS
T ss_pred eeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcC
Confidence 345677889999999987 5 88999999999999999987643222222222234677999999953 5999999
Q ss_pred CCeEEEEEecC
Q 008820 528 DRTVKIALCNR 538 (552)
Q Consensus 528 Dg~v~iw~~~~ 538 (552)
||.|++|+++.
T Consensus 275 Dg~I~vwd~~~ 285 (753)
T 3jro_A 275 DNKVTLWKENL 285 (753)
T ss_dssp SSCEECCBCCS
T ss_pred CCEEEEEecCC
Confidence 99999999973
No 108
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.96 E-value=1.8e-27 Score=239.35 Aligned_cols=255 Identities=18% Similarity=0.211 Sum_probs=200.4
Q ss_pred eeCCCeEEEEE-------------eecCccceEEEEEc---CCEEEEEeCCCcEEEEeCCCC-------eEEEEEeCCCC
Q 008820 237 GLSKGNVKFKD-------------LQGHRDCVTGLAVG---GGFLFSSSFDKSIHVWSLKDF-------SHVHTFKGHDH 293 (552)
Q Consensus 237 ~~~~~~~~~~~-------------l~~H~~~V~~l~~s---~~~l~s~s~dg~I~iwd~~~~-------~~~~~~~~h~~ 293 (552)
+..++.+.+|+ +.+|.+.|++++|+ +++|++|+.||+|++||+.++ +.+..+.+|..
T Consensus 53 ~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~ 132 (402)
T 2aq5_A 53 ASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTK 132 (402)
T ss_dssp CSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSS
T ss_pred EcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCC
Confidence 45667777776 45799999999997 789999999999999999987 66888999999
Q ss_pred CeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCc
Q 008820 294 KVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGT 373 (552)
Q Consensus 294 ~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~ 373 (552)
.|.+++|+|++..++++++.||.|++||++++.....+.. ..+.. .....++++++++|++++.||.|++||+++++
T Consensus 133 ~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~-~~~~~--~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~ 209 (402)
T 2aq5_A 133 RVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGP-DVHPD--TIYSVDWSRDGALICTSCRDKRVRVIEPRKGT 209 (402)
T ss_dssp CEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECT-TTCCS--CEEEEEECTTSSCEEEEETTSEEEEEETTTTE
T ss_pred eEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEec-CCCCC--ceEEEEECCCCCEEEEEecCCcEEEEeCCCCc
Confidence 9999999998878999999999999999987643332210 22221 22345778889999999999999999999999
Q ss_pred eeEEe-cCCCCC-eEEEEEe-CC-EEEEE---eCCCcEEEEECCCCce-eEEEecCCCCceEEEEEEcCCCCEEEE-EEC
Q 008820 374 LSCTM-SGHKSA-VSTLAVC-NG-VLYSG---SRDGTIRLWSLSDHSL-LTVLEEDSSGAVSSVLSLTAVQHTLVV-SHE 444 (552)
Q Consensus 374 ~~~~~-~~h~~~-v~~l~~~-~~-~l~s~---~~dg~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~~s~~~~~l~~-g~~ 444 (552)
.+..+ .+|.+. +.++.|+ ++ ++++| +.|+.|++||+++++. +......+...+.. ++|+|+++++++ |+.
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~-~~~s~~~~~l~~~g~~ 288 (402)
T 2aq5_A 210 VVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLL-PFFDPDTNIVYLCGKG 288 (402)
T ss_dssp EEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEE-EEEETTTTEEEEEETT
T ss_pred eeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeE-EEEcCCCCEEEEEEcC
Confidence 99998 788876 8999999 44 67777 6899999999998764 44444444444554 699999999975 557
Q ss_pred CCcEEEEeCCcc---eeeeecc--cceEEEEEe--cCCEEEEEeCCCeEEEEecCCCeee
Q 008820 445 SGSIKVWRNDKF---MKSMQTH--KGSVFAVFL--EGKWLFTGGWDKTVSVQELAGDEFE 497 (552)
Q Consensus 445 dg~i~iwd~~~~---~~~~~~h--~~~v~~v~~--~~~~l~sgs~dg~i~iwd~~~~~~~ 497 (552)
||.|++||.... +..+..| ...+.++.| ++.++++ .++.+++|++.++.+.
T Consensus 289 dg~i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~sp~~~~~~s--~~~~~~~~~l~~~~~~ 346 (402)
T 2aq5_A 289 DSSIRYFEITSEAPFLHYLSMFSSKESQRGMGYMPKRGLEVN--KCEIARFYKLHERKCE 346 (402)
T ss_dssp CSCEEEEEECSSTTCEEEEEEECCSSCCSEEEECCGGGSCGG--GTEEEEEEEEETTEEE
T ss_pred CCeEEEEEecCCCcceEeecccccCCcccceEEeccccccee--cceeEEEEEcCCCcEE
Confidence 999999996532 4455544 588888887 6666654 5679999999876553
No 109
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.96 E-value=1.7e-26 Score=218.53 Aligned_cols=267 Identities=13% Similarity=0.105 Sum_probs=185.0
Q ss_pred EEEEEeCCCcEEEEeCCCC---eEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcE-EEEeCCCCCCCccccccccCCC
Q 008820 264 FLFSSSFDKSIHVWSLKDF---SHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGI-FVWSFSFPLGHEPLKKWNEEKD 339 (552)
Q Consensus 264 ~l~s~s~dg~I~iwd~~~~---~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i-~vwd~~~~~~~~~~~~~~~~~~ 339 (552)
.+++++.+ +|++|+..++ +.++++..|..+|..+++.|+..+++..+-.+=.+ .++-+........+...... .
T Consensus 56 ~~~~~~~~-~v~lw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla~spd~~~~~~~l~s-~ 133 (356)
T 2w18_A 56 CIITACED-VVSLWKALDAWQWEKLYTWHFAEVPVLQIVPVPDVYNLVCVALGNLEIREIRALFCSSDDESEKQVLLK-S 133 (356)
T ss_dssp EEEEEESS-EEEEEEESSSSBEEEEEEEECCSSCEEEECCCTTCCSCEEEEECSSSEEEEEEECC------CCEEEEE-E
T ss_pred EEEEeccc-eEEEcccCCCccceeeEEEeccCceeEEEEEcCcccceeeeeeccccccceEEEEECCCccccccEEEe-C
Confidence 56777755 8999999998 89999999999999999999766554333221111 12222111110000000000 0
Q ss_pred ceeeeEEEEeeCCCEEEEee--CCCcEEEEEC-CCCceeEEecCCCCCeEEEEEeC-----CEEEEEeCCCcEEEEECCC
Q 008820 340 WRYSGIHALTTSGRYLYTGS--GDRTIKAWSL-LDGTLSCTMSGHKSAVSTLAVCN-----GVLYSGSRDGTIRLWSLSD 411 (552)
Q Consensus 340 ~~~~~~~~~~~~~~~l~sgs--~dg~i~iwd~-~~~~~~~~~~~h~~~v~~l~~~~-----~~l~s~~~dg~i~iwd~~~ 411 (552)
.+...+..+ ++++.+.+++ .|+.|++|++ .+++.+..+.+|...++.++|+. ..|++++.|++|++||+++
T Consensus 134 g~~~~v~~l-~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~T 212 (356)
T 2w18_A 134 GNIKAVLGL-TKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKT 212 (356)
T ss_dssp EEEEEEEEE-TTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTT
T ss_pred CCeEEEEec-CCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCC
Confidence 012223343 3455555533 5999999999 55888888889999998888882 4999999999999999999
Q ss_pred CceeEEEecCCCC-ceEEEEEEcCCCCEE------------EEEECCCcEEEEeCCc--ceeee-----ecccceEEEEE
Q 008820 412 HSLLTVLEEDSSG-AVSSVLSLTAVQHTL------------VVSHESGSIKVWRNDK--FMKSM-----QTHKGSVFAVF 471 (552)
Q Consensus 412 ~~~~~~~~~~~~~-~~~~~~~~s~~~~~l------------~~g~~dg~i~iwd~~~--~~~~~-----~~h~~~v~~v~ 471 (552)
+++++++..++.. .....++|+|++.++ ++|+.|++|++||..+ .+..+ .+|...+.+.+
T Consensus 213 Gk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~ 292 (356)
T 2w18_A 213 GQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGD 292 (356)
T ss_dssp CCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEE
T ss_pred CcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEccc
Confidence 9999999865321 122235899999876 5688899999999654 33333 46777777777
Q ss_pred ecCCEEEEEeCCCeEEEEecCCCeeeeeeccCCCcccCcceEEEEEeCC--eEEEEeCCCeEEEEEec
Q 008820 472 LEGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQG--KLFVGCADRTVKIALCN 537 (552)
Q Consensus 472 ~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~--~l~s~s~Dg~v~iw~~~ 537 (552)
+++.++++|+.|++|+|||+.++++...+..+. ...+.+++|+|+ .|++|+.|++|+|||+.
T Consensus 293 ~sg~~lASgS~DgTIkIWDl~tGk~l~tL~gH~----~~vvs~vafSPDG~~LaSGS~D~TIklWd~~ 356 (356)
T 2w18_A 293 VKDHCAAAILTSGTIAIWDLLLGQCTALLPPVS----DQHWSFVKWSGTDSHLLAGQKDGNIFVYHYS 356 (356)
T ss_dssp EETTEEEEEETTSCEEEEETTTCSEEEEECCC------CCCCEEEECSSSSEEEEECTTSCEEEEEEC
T ss_pred cCCCEEEEEcCCCcEEEEECCCCcEEEEecCCC----CCeEEEEEECCCCCEEEEEECCCcEEEecCC
Confidence 789999999999999999999998887765431 233556899964 59999999999999963
No 110
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1.2e-27 Score=240.73 Aligned_cols=255 Identities=11% Similarity=0.067 Sum_probs=198.1
Q ss_pred cCccceEEEEEc--CCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCC
Q 008820 250 GHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLG 327 (552)
Q Consensus 250 ~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~ 327 (552)
.-..+|.+++|+ |+++||++.|++|+ |...++.+ .+|...|.+++|+|++ .++.+.+|+.+ .
T Consensus 13 ~~~~~v~sv~~SpDG~~iASas~D~TV~--d~~~~~~l---~gh~~~v~~V~FsPdg--------~~~~~~~~~~~---~ 76 (588)
T 2j04_A 13 EFEDWKNNLTWARDGTLYLTTFPDISIG--QPKYAKDI---NCNSKNLFHVKEFPLE--------FENKLDFELAQ---Q 76 (588)
T ss_dssp CCSSSSCCEEECTTSCEEEECSSSEEEE--EECCCSCC---SSBGGGTEEEEEECCC--------CCCTTTTSCCC---S
T ss_pred HhhccEEEEEECCCCCEEEEEcCCceee--ccccccee---cCCCccEEEEEECCCC--------CcceEEEEeCC---C
Confidence 345789999999 99999999999999 76666544 7999999999999977 45555555433 2
Q ss_pred CccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCceeEEecCCCC-----CeEEEEEe--CCEEEEEeC
Q 008820 328 HEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKS-----AVSTLAVC--NGVLYSGSR 400 (552)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~-----~v~~l~~~--~~~l~s~~~ 400 (552)
...+.. . + . ......+++|+|+.|++++.||.|++||.++ ++..+. |.. .|.+++|+ +.+|++|+.
T Consensus 77 ~~~~~~-~-~-~-~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~ 149 (588)
T 2j04_A 77 NGLLNS-Q-P-V-CYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNE 149 (588)
T ss_dssp SCSSTT-S-C-S-CCEEEEEECSSSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEET
T ss_pred ceEeec-C-C-C-CcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEcC
Confidence 222211 1 1 1 3334568999999999999999999999544 666667 665 49999999 349999999
Q ss_pred CCcEEEEECCCCce-------eEEEe---cCCCCceEEEEEEcCCCCEEEEEECCCcEEEEeCCcce-----eee-eccc
Q 008820 401 DGTIRLWSLSDHSL-------LTVLE---EDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDKFM-----KSM-QTHK 464 (552)
Q Consensus 401 dg~i~iwd~~~~~~-------~~~~~---~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~~~~-----~~~-~~h~ 464 (552)
||+|++||+.++.. +.++. ..|...+.+ ++|+|+| +++++.|++|++||..... +.+ .+|.
T Consensus 150 DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~s-VawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~ 226 (588)
T 2j04_A 150 DGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTH-IVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQNASR 226 (588)
T ss_dssp TSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEE-EEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEECCCS
T ss_pred CCEEEEEECCCCccccccceeeeeeecccccccccEEE-EEEcCCc--EEEEeCCCeEEEEECCCCccccceeeeccccc
Confidence 99999999998863 56664 223456666 6999999 8889999999999965322 346 4788
Q ss_pred ceEEEEEecCCEEEEEeCCCeEEEEecCCCeeeeeeccCCCcccCcceEEEEE--eCCe--EEEEeCCCeEEEEEec
Q 008820 465 GSVFAVFLEGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLY--WQGK--LFVGCADRTVKIALCN 537 (552)
Q Consensus 465 ~~v~~v~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~--~~~~--l~s~s~Dg~v~iw~~~ 537 (552)
..|.+++|.|+.|++++ +++|++||+.+++....... +...|..+++ +++. +++++.||+ ++|..+
T Consensus 227 ~~V~svaFsg~~LASa~-~~tIkLWd~~~~~~~~~~~g-----h~~~V~~va~~~s~d~~~La~a~edG~-klw~~d 296 (588)
T 2j04_A 227 RKITDLKIVDYKVVLTC-PGYVHKIDLKNYSISSLKTG-----SLENFHIIPLNHEKESTILLMSNKTSY-KVLLED 296 (588)
T ss_dssp SCCCCEEEETTEEEEEC-SSEEEEEETTTTEEEEEECS-----CCSCCCEEEETTCSSCEEEEECSSCEE-EEEESS
T ss_pred CcEEEEEEECCEEEEEe-CCeEEEEECCCCeEEEEEcC-----CCceEEEEEeeeCCCCCEEEEEcCCCC-EEEeec
Confidence 99999999778999998 69999999998877443322 2677999999 8653 888999999 999986
No 111
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.95 E-value=4.2e-26 Score=225.75 Aligned_cols=266 Identities=16% Similarity=0.183 Sum_probs=211.6
Q ss_pred CCCCccccceeeecC---cceEEEeeCCCeEEEEEe-----------ecCccceEEEEEc--CCEEEEEeCCCcEEEEeC
Q 008820 216 NSDGADIDQARAAGG---VKDLVNGLSKGNVKFKDL-----------QGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSL 279 (552)
Q Consensus 216 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l-----------~~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~ 279 (552)
..+...+..+.+++. +..++++..++.+.+|++ .+|.+.|++++|+ +++|++++.||.|++||+
T Consensus 36 ~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~ 115 (368)
T 3mmy_A 36 SSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDL 115 (368)
T ss_dssp SCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred cCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEc
Confidence 445566889999988 589999999999998874 4689999999999 889999999999999999
Q ss_pred CCCeEEEEEeCCCCCeEEEEE--ecCCCCEEEEEcCCCcEEEEeCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEE
Q 008820 280 KDFSHVHTFKGHDHKVMAVVY--VDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYT 357 (552)
Q Consensus 280 ~~~~~~~~~~~h~~~v~~v~~--~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s 357 (552)
.+++.+. +..|...|.+++| +++ ..++++++.||.|++||+++++....+. .+. .+.++.+.+..+++
T Consensus 116 ~~~~~~~-~~~~~~~v~~~~~~~~~~-~~~l~~~~~dg~i~vwd~~~~~~~~~~~---~~~-----~~~~~~~~~~~~~~ 185 (368)
T 3mmy_A 116 SSNQAIQ-IAQHDAPVKTIHWIKAPN-YSCVMTGSWDKTLKFWDTRSSNPMMVLQ---LPE-----RCYCADVIYPMAVV 185 (368)
T ss_dssp TTTEEEE-EEECSSCEEEEEEEECSS-CEEEEEEETTSEEEEECSSCSSCSEEEE---CSS-----CEEEEEEETTEEEE
T ss_pred CCCCcee-eccccCceEEEEEEeCCC-CCEEEEccCCCcEEEEECCCCcEEEEEe---cCC-----CceEEEecCCeeEE
Confidence 9998776 5669999999999 554 4578999999999999998765443333 221 24566667788999
Q ss_pred eeCCCcEEEEECCCCceeEEe--cCCCCCeEEEEEe--CC----EEEEEeCCCcEEEEECCCC---ceeEEEecCCCC--
Q 008820 358 GSGDRTIKAWSLLDGTLSCTM--SGHKSAVSTLAVC--NG----VLYSGSRDGTIRLWSLSDH---SLLTVLEEDSSG-- 424 (552)
Q Consensus 358 gs~dg~i~iwd~~~~~~~~~~--~~h~~~v~~l~~~--~~----~l~s~~~dg~i~iwd~~~~---~~~~~~~~~~~~-- 424 (552)
++.++.+++||++........ ..+...+.++.+. .. .+++++.||.|++||++.. .....+..+...
T Consensus 186 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~ 265 (368)
T 3mmy_A 186 ATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGT 265 (368)
T ss_dssp EEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC--
T ss_pred EeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeecccc
Confidence 999999999999876544333 2244455666655 22 3999999999999999987 556666655321
Q ss_pred ---------ceEEEEEEcCCCCEEEEEECCCcEEEEeCC--cceeeeecccceEEEEEe--cCCEEEEEeCCCeEEEEec
Q 008820 425 ---------AVSSVLSLTAVQHTLVVSHESGSIKVWRND--KFMKSMQTHKGSVFAVFL--EGKWLFTGGWDKTVSVQEL 491 (552)
Q Consensus 425 ---------~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~--~~~~~~~~h~~~v~~v~~--~~~~l~sgs~dg~i~iwd~ 491 (552)
.+.+ ++|+|++++|++|+.||.|++||+. +.+..+..|...|.++.| ++++|++++.|+..+.|++
T Consensus 266 ~~~~~~~~~~v~~-~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~s~d~~~~~~~~ 344 (368)
T 3mmy_A 266 NTSAPQDIYAVNG-IAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISACCFNHNGNIFAYASSYDWSKGHEF 344 (368)
T ss_dssp --CCCEEECCEEE-EEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSCEEEEEECTTSSCEEEEECCCSTTCGGG
T ss_pred cccccccccceEE-EEEecCCCEEEEEccCCeEEEEECCCCcEEEEecCCCCCceEEEECCCCCeEEEEecccccccccc
Confidence 3444 6999999999999999999999965 467788899999999987 8999999999986666554
Q ss_pred C
Q 008820 492 A 492 (552)
Q Consensus 492 ~ 492 (552)
.
T Consensus 345 ~ 345 (368)
T 3mmy_A 345 Y 345 (368)
T ss_dssp C
T ss_pred c
Confidence 3
No 112
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.95 E-value=1.2e-26 Score=236.46 Aligned_cols=268 Identities=9% Similarity=0.118 Sum_probs=202.7
Q ss_pred CccccceeeecCcceEEEeeCCCeEEEEEe--------------------ecCc------------cceEEEEEc--C--
Q 008820 219 GADIDQARAAGGVKDLVNGLSKGNVKFKDL--------------------QGHR------------DCVTGLAVG--G-- 262 (552)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--------------------~~H~------------~~V~~l~~s--~-- 262 (552)
...+..+.+++.+..++++..++.+.+|++ .+|. +.|++++|+ +
T Consensus 28 ~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~ 107 (447)
T 3dw8_B 28 ADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNA 107 (447)
T ss_dssp GGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCSS
T ss_pred cCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCCc
Confidence 355888999999999999999999998874 4687 889999999 4
Q ss_pred CEEEEEeCCCcEEEEeCCCCeEE---------------------------------------EE-EeCCCCCeEEEEEec
Q 008820 263 GFLFSSSFDKSIHVWSLKDFSHV---------------------------------------HT-FKGHDHKVMAVVYVD 302 (552)
Q Consensus 263 ~~l~s~s~dg~I~iwd~~~~~~~---------------------------------------~~-~~~h~~~v~~v~~~~ 302 (552)
.+|++++.|++|++||+.+++.. .. ..+|...|.+++|+|
T Consensus 108 ~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 187 (447)
T 3dw8_B 108 AQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISINS 187 (447)
T ss_dssp SEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECT
T ss_pred ceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEcC
Confidence 79999999999999998764432 12 367999999999999
Q ss_pred CCCCEEEEEcCCCcEEEEeCCCCCCCcccc-----ccccCCCceeeeEEEEeeCC-CEEEEeeCCCcEEEEECCCCce--
Q 008820 303 EDQPLCISGDSGGGIFVWSFSFPLGHEPLK-----KWNEEKDWRYSGIHALTTSG-RYLYTGSGDRTIKAWSLLDGTL-- 374 (552)
Q Consensus 303 ~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~-~~l~sgs~dg~i~iwd~~~~~~-- 374 (552)
++. ++++| .|+.|++||++......... .+..+. ......+++|++ ++|++|+.||.|++||+++++.
T Consensus 188 ~~~-~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~--~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~ 263 (447)
T 3dw8_B 188 DYE-TYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELT--EVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCD 263 (447)
T ss_dssp TSS-EEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCC--CCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSC
T ss_pred CCC-EEEEe-CCCeEEEEECCCCCceeeeeecccccccccC--cceEEEEECCCCCcEEEEEeCCCeEEEEECcCCcccc
Confidence 655 77788 79999999998432111100 111222 122345778887 8999999999999999999887
Q ss_pred --eEEecCCCC------------CeEEEEEe-C-CEEEEEeCCCcEEEEECCC-CceeEEEecCCCCce-----------
Q 008820 375 --SCTMSGHKS------------AVSTLAVC-N-GVLYSGSRDGTIRLWSLSD-HSLLTVLEEDSSGAV----------- 426 (552)
Q Consensus 375 --~~~~~~h~~------------~v~~l~~~-~-~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~----------- 426 (552)
+..+..|.. .|.+++|+ + .+|++++. +.|++||+++ ++++..+..+.....
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i 342 (447)
T 3dw8_B 264 RHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCI 342 (447)
T ss_dssp TTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGG
T ss_pred ceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceeecccccccccccccccccc
Confidence 788888876 89999999 3 38888888 9999999997 888888876531000
Q ss_pred --EEEEEEcCCCCEEEEEECCCcEEEEeCCcc-eeeeec---------------------------------ccceEEEE
Q 008820 427 --SSVLSLTAVQHTLVVSHESGSIKVWRNDKF-MKSMQT---------------------------------HKGSVFAV 470 (552)
Q Consensus 427 --~~~~~~s~~~~~l~~g~~dg~i~iwd~~~~-~~~~~~---------------------------------h~~~v~~v 470 (552)
...++|+|++++|++|+.||.|++||.... ...+.. +...|..+
T Consensus 343 ~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 422 (447)
T 3dw8_B 343 FDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDITLEASRENNKPRTVLKPRKVCASGKRKKDEISVDSLDFNKKILHT 422 (447)
T ss_dssp GCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEEEEECCSTTCCTTCBCCCCCEECSSCCCTTCEEGGGCCTTSCCCEE
T ss_pred ccceEEEECCCCCEEEEeccCCEEEEEEcCCCcceeeeecccccccccccCCccccccCCcccccccccccccCCceeEE
Confidence 011589999999999999999999996532 112222 23456666
Q ss_pred Ee--cCCEEEEEeCCCeEEEEecC
Q 008820 471 FL--EGKWLFTGGWDKTVSVQELA 492 (552)
Q Consensus 471 ~~--~~~~l~sgs~dg~i~iwd~~ 492 (552)
+| ++.+|++++.++ +++|.-+
T Consensus 423 ~~~p~~~~la~~~~~~-~~~~~~~ 445 (447)
T 3dw8_B 423 AWHPKENIIAVATTNN-LYIFQDK 445 (447)
T ss_dssp EECSSSSEEEEECSSC-EEEEECC
T ss_pred EECCCCCEEEEEecce-eeeeccc
Confidence 65 899999998775 7777643
No 113
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.95 E-value=1.2e-25 Score=223.61 Aligned_cols=233 Identities=21% Similarity=0.289 Sum_probs=188.0
Q ss_pred CCccccceeeecCcceEEEeeCCCeEEEEEe-----------ecCccceEEEEEc----CCEEEEEeCCCcEEEEeCCCC
Q 008820 218 DGADIDQARAAGGVKDLVNGLSKGNVKFKDL-----------QGHRDCVTGLAVG----GGFLFSSSFDKSIHVWSLKDF 282 (552)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-----------~~H~~~V~~l~~s----~~~l~s~s~dg~I~iwd~~~~ 282 (552)
+...+..+.+++.+..++++..++.+.+|++ .+|.+.|++++|+ +++|++|+.||.|++||+.++
T Consensus 10 h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~ 89 (379)
T 3jrp_A 10 HNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENG 89 (379)
T ss_dssp CCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETT
T ss_pred CcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCC
Confidence 3445888889999999999999999999875 4799999999997 799999999999999999998
Q ss_pred e--EEEEEeCCCCCeEEEEEecCC-CCEEEEEcCCCcEEEEeCCCCCCCccccccccCCCceeeeEEEEee---------
Q 008820 283 S--HVHTFKGHDHKVMAVVYVDED-QPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTT--------- 350 (552)
Q Consensus 283 ~--~~~~~~~h~~~v~~v~~~~~~-~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 350 (552)
+ .+..+..|...|.+++|+|+. ..++++++.|+.|++||+.......... ...+.. .....+++|
T Consensus 90 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~~~--~v~~~~~~~~~~~~~~~~ 166 (379)
T 3jrp_A 90 RWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPII-IDAHAI--GVNSASWAPATIEEDGEH 166 (379)
T ss_dssp EEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEE-EECCTT--CEEEEEECCCC-------
T ss_pred ceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEE-ecCCCC--ceEEEEEcCccccccccc
Confidence 7 778888999999999999973 5688999999999999998764333222 222221 122346666
Q ss_pred ----CCCEEEEeeCCCcEEEEECCCCc----eeEEecCCCCCeEEEEEe-C---C-EEEEEeCCCcEEEEECCCCce---
Q 008820 351 ----SGRYLYTGSGDRTIKAWSLLDGT----LSCTMSGHKSAVSTLAVC-N---G-VLYSGSRDGTIRLWSLSDHSL--- 414 (552)
Q Consensus 351 ----~~~~l~sgs~dg~i~iwd~~~~~----~~~~~~~h~~~v~~l~~~-~---~-~l~s~~~dg~i~iwd~~~~~~--- 414 (552)
+++.+++|+.||.|++||+++++ ....+.+|...|.+++|+ + + +|++++.||.|++||++++..
T Consensus 167 ~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 246 (379)
T 3jrp_A 167 NGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWK 246 (379)
T ss_dssp ---CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCE
T ss_pred cCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCCccce
Confidence 58899999999999999998764 456778899999999999 4 4 899999999999999998752
Q ss_pred eEEEec-CCCCceEEEEEEcCCCCEEEEEECCCcEEEEeCC
Q 008820 415 LTVLEE-DSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRND 454 (552)
Q Consensus 415 ~~~~~~-~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~ 454 (552)
...+.. .+...+.. ++|+|++++|++++.||.|++||..
T Consensus 247 ~~~~~~~~~~~~v~~-~~~s~~g~~l~~~~~dg~i~iw~~~ 286 (379)
T 3jrp_A 247 KTLLKEEKFPDVLWR-ASWSLSGNVLALSGGDNKVTLWKEN 286 (379)
T ss_dssp EEESSSSCCSSCEEE-EEECSSSCCEEEEESSSSEEEEEEE
T ss_pred eeeeccccCCCcEEE-EEEcCCCCEEEEecCCCcEEEEeCC
Confidence 222222 13344444 6999999999999999999999965
No 114
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.95 E-value=6.1e-28 Score=242.98 Aligned_cols=250 Identities=11% Similarity=0.065 Sum_probs=190.8
Q ss_pred cccceeeecCcceEEEeeCCCeEEE----EEeecCccceEEEEEc-CCEEEEEeCCCcEEEEeCCCCeEEEEEe-CCCCC
Q 008820 221 DIDQARAAGGVKDLVNGLSKGNVKF----KDLQGHRDCVTGLAVG-GGFLFSSSFDKSIHVWSLKDFSHVHTFK-GHDHK 294 (552)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~l~~H~~~V~~l~~s-~~~l~s~s~dg~I~iwd~~~~~~~~~~~-~h~~~ 294 (552)
-+..+.++++++.+++++.|+.++- ..+.+|...|.+++|+ .. .++++.+|+. +....+. .|...
T Consensus 17 ~v~sv~~SpDG~~iASas~D~TV~d~~~~~~l~gh~~~v~~V~FsPdg------~~~~~~~~~~---~~~~~~~~~~~~~ 87 (588)
T 2j04_A 17 WKNNLTWARDGTLYLTTFPDISIGQPKYAKDINCNSKNLFHVKEFPLE------FENKLDFELA---QQNGLLNSQPVCY 87 (588)
T ss_dssp SSCCEEECTTSCEEEECSSSEEEEEECCCSCCSSBGGGTEEEEEECCC------CCCTTTTSCC---CSSCSSTTSCSCC
T ss_pred cEEEEEECCCCCEEEEEcCCceeecccccceecCCCccEEEEEECCCC------CcceEEEEeC---CCceEeecCCCCc
Confidence 4778999999999999999998861 1257999999999998 22 4555555553 3222232 46889
Q ss_pred eEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCccccccccCCC---ceeeeEEEEeeCCCEEEEeeCCCcEEEEECCC
Q 008820 295 VMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKD---WRYSGIHALTTSGRYLYTGSGDRTIKAWSLLD 371 (552)
Q Consensus 295 v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~ 371 (552)
|.+++|+|++. .+++++.||.|++||.+. .+.... +.. .......+|+|+|++|++|+.||+|++||+.+
T Consensus 88 V~~vawSPdG~-~LAs~s~dg~V~iwd~~~-----~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~ 160 (588)
T 2j04_A 88 PRVCKPSPIDD-WMAVLSNNGNVSVFKDNK-----MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRK 160 (588)
T ss_dssp EEEEEECSSSS-CEEEEETTSCEEEEETTE-----EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCC
T ss_pred EEEEEECCCCC-EEEEEeCCCcEEEEeCCc-----eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCC
Confidence 99999999776 669999999999999543 222222 221 01223568999999999999999999999998
Q ss_pred Cce-------eEEe----cCCCCCeEEEEEe-CCEEEEEeCCCcEEEEECCCCce---eEEEecCCCCceEEEEEEcCCC
Q 008820 372 GTL-------SCTM----SGHKSAVSTLAVC-NGVLYSGSRDGTIRLWSLSDHSL---LTVLEEDSSGAVSSVLSLTAVQ 436 (552)
Q Consensus 372 ~~~-------~~~~----~~h~~~v~~l~~~-~~~l~s~~~dg~i~iwd~~~~~~---~~~~~~~~~~~~~~~~~~s~~~ 436 (552)
+.. +.++ .+|...|.+++|+ ++ +++++.|++|++||+.+++. ..++...+...+.. ++|+ +
T Consensus 161 ~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg-Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~s-vaFs--g 236 (588)
T 2j04_A 161 NSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV-LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITD-LKIV--D 236 (588)
T ss_dssp CTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE-EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCC-EEEE--T
T ss_pred CccccccceeeeeeecccccccccEEEEEEcCCc-EEEEeCCCeEEEEECCCCccccceeeecccccCcEEE-EEEE--C
Confidence 753 5666 6788999999999 56 99999999999999988774 35564344455555 5787 6
Q ss_pred CEEEEEECCCcEEEEeCCccee-eee-cccceEEEEEe----cCCEEEEEeCCCeEEEEecC
Q 008820 437 HTLVVSHESGSIKVWRNDKFMK-SMQ-THKGSVFAVFL----EGKWLFTGGWDKTVSVQELA 492 (552)
Q Consensus 437 ~~l~~g~~dg~i~iwd~~~~~~-~~~-~h~~~v~~v~~----~~~~l~sgs~dg~i~iwd~~ 492 (552)
..+++++ +++|++||...... .+. +|...+..+.+ ++..+++++.||+ ++|...
T Consensus 237 ~~LASa~-~~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d~~~La~a~edG~-klw~~d 296 (588)
T 2j04_A 237 YKVVLTC-PGYVHKIDLKNYSISSLKTGSLENFHIIPLNHEKESTILLMSNKTSY-KVLLED 296 (588)
T ss_dssp TEEEEEC-SSEEEEEETTTTEEEEEECSCCSCCCEEEETTCSSCEEEEECSSCEE-EEEESS
T ss_pred CEEEEEe-CCeEEEEECCCCeEEEEEcCCCceEEEEEeeeCCCCCEEEEEcCCCC-EEEeec
Confidence 8898887 69999999764333 444 89999987776 6778999999999 999874
No 115
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.95 E-value=4.8e-25 Score=225.14 Aligned_cols=238 Identities=15% Similarity=0.117 Sum_probs=188.6
Q ss_pred cCccceEEEEEc--CCEE-EEEeCCCcEEEEeCC--CCeEEEEEe--CCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeC
Q 008820 250 GHRDCVTGLAVG--GGFL-FSSSFDKSIHVWSLK--DFSHVHTFK--GHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSF 322 (552)
Q Consensus 250 ~H~~~V~~l~~s--~~~l-~s~s~dg~I~iwd~~--~~~~~~~~~--~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~ 322 (552)
+|.+.|++++|+ +++| ++|+.||+|++||+. +++.+..+. .|...|.+++|+|++. +|++|+.||.|++|++
T Consensus 100 ~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~-~l~~~~~~g~v~~~~~ 178 (450)
T 2vdu_B 100 PIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDT-TVIIADKFGDVYSIDI 178 (450)
T ss_dssp CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSS-EEEEEETTSEEEEEET
T ss_pred ccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCC-EEEEEeCCCcEEEEec
Confidence 455579999999 7885 899999999999999 888888886 5778999999999665 7789999999999999
Q ss_pred CCCCCCc-cccccccCCCceeeeEEEEeeC---CCEEEEeeCCCcEEEEECCCCceeEE-ecCCCCCeEEEEEe-CCEEE
Q 008820 323 SFPLGHE-PLKKWNEEKDWRYSGIHALTTS---GRYLYTGSGDRTIKAWSLLDGTLSCT-MSGHKSAVSTLAVC-NGVLY 396 (552)
Q Consensus 323 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~---~~~l~sgs~dg~i~iwd~~~~~~~~~-~~~h~~~v~~l~~~-~~~l~ 396 (552)
.+..... ....+..+.. .....+++|+ +++|++|+.|+.|++||+++++.+.. +.+|...|++++|+ +.+|+
T Consensus 179 ~~~~~~~~~~~~~~~h~~--~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~sd~~~l~ 256 (450)
T 2vdu_B 179 NSIPEEKFTQEPILGHVS--MLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSICCGKDYLLL 256 (450)
T ss_dssp TSCCCSSCCCCCSEECSS--CEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSCEEEEEECSTTEEE
T ss_pred CCcccccccceeeecccC--ceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCceEEEEECCCCEEE
Confidence 8766544 3333333332 2234578898 88999999999999999999998887 56899999999998 55999
Q ss_pred EEeCCCcEEEEECCCCceeEEEecCC------------------------CCceEEEEEEcCCCCEEEEEE-CCCcEEEE
Q 008820 397 SGSRDGTIRLWSLSDHSLLTVLEEDS------------------------SGAVSSVLSLTAVQHTLVVSH-ESGSIKVW 451 (552)
Q Consensus 397 s~~~dg~i~iwd~~~~~~~~~~~~~~------------------------~~~~~~~~~~s~~~~~l~~g~-~dg~i~iw 451 (552)
+++.|++|++||+++++.+..+..+. ...+ ..++++|+++++++++ .|+.|++|
T Consensus 257 s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~~i~~~~~~~~l~~~~~~d~~i~iw 335 (450)
T 2vdu_B 257 SAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAV-SKIIKSKNLPFVAFFVEATKCIIIL 335 (450)
T ss_dssp EEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCE-EEEEECSSSSEEEEEETTCSEEEEE
T ss_pred EEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEE-EEEEEeCCCCEEEEEECCCCeEEEE
Confidence 99999999999999999888876321 1223 3468999999999999 89999999
Q ss_pred eC--C-----cceeeeecccceEEEEEec-CCEEEEEeC-------CCeEEEEecC
Q 008820 452 RN--D-----KFMKSMQTHKGSVFAVFLE-GKWLFTGGW-------DKTVSVQELA 492 (552)
Q Consensus 452 d~--~-----~~~~~~~~h~~~v~~v~~~-~~~l~sgs~-------dg~i~iwd~~ 492 (552)
|+ . +.+..+..| ..+.++.|. +..+++.+. +..|.+|.+.
T Consensus 336 ~~~~~~~~~l~~~~~~~~~-~~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~~~ 390 (450)
T 2vdu_B 336 EMSEKQKGDLALKQIITFP-YNVISLSAHNDEFQVTLDNKESSGVQKNFAKFIEYN 390 (450)
T ss_dssp EECSSSTTCEEEEEEEECS-SCEEEEEEETTEEEEEECCTTCCSSCCCSEEEEEEE
T ss_pred EeccCCCCceeeccEeccC-CceEEEEecCCcEEEEEecccCCCCCCcceEEEEEE
Confidence 98 2 245566777 889999884 334444432 4558888764
No 116
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.95 E-value=9.9e-25 Score=218.35 Aligned_cols=268 Identities=13% Similarity=0.128 Sum_probs=206.7
Q ss_pred CEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCccccccccCCCcee
Q 008820 263 GFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRY 342 (552)
Q Consensus 263 ~~l~s~s~dg~I~iwd~~~~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~ 342 (552)
..+++++.|++|++||+.+++.+..+..|. .+.+++|+|++..++++++.|+.|++||+.+++....+ ..+. .
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~---~~~~---~ 75 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSNKVTATIPVGS-NPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATV---PAGS---S 75 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEE---ECSS---S
T ss_pred EEEEEcCCCCEEEEEECCCCeEEEEeecCC-CcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEE---ECCC---C
Confidence 467889999999999999999999998775 48999999988877789999999999999876443322 2222 2
Q ss_pred eeEEEEeeCCCEEE-EeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe-CC-EE-EEEeCCCcEEEEECCCCceeEEE
Q 008820 343 SGIHALTTSGRYLY-TGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC-NG-VL-YSGSRDGTIRLWSLSDHSLLTVL 418 (552)
Q Consensus 343 ~~~~~~~~~~~~l~-sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~-~~-~l-~s~~~dg~i~iwd~~~~~~~~~~ 418 (552)
....++++++++++ +++.++.|++||+.+++.+..+..+ ..+.+++|+ ++ .+ ++++.|+.|++||+.+++.+..+
T Consensus 76 v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~ 154 (391)
T 1l0q_A 76 PQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTG-KSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTV 154 (391)
T ss_dssp EEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECS-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred ccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEE
Confidence 23457888998765 5556799999999999998888754 468999999 33 55 78888999999999999988888
Q ss_pred ecCCCCceEEEEEEcCCCCEE-EEEECCCcEEEEeCCc--ceeeeecccceEEEEEe--cCCEEEEEe---CCCeEEEEe
Q 008820 419 EEDSSGAVSSVLSLTAVQHTL-VVSHESGSIKVWRNDK--FMKSMQTHKGSVFAVFL--EGKWLFTGG---WDKTVSVQE 490 (552)
Q Consensus 419 ~~~~~~~~~~~~~~s~~~~~l-~~g~~dg~i~iwd~~~--~~~~~~~h~~~v~~v~~--~~~~l~sgs---~dg~i~iwd 490 (552)
..+. .. ..++++|+++.+ ++++.++.|++||.+. ....+. +...+.++.+ ++++|++++ .++.|++||
T Consensus 155 ~~~~--~~-~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d 230 (391)
T 1l0q_A 155 SVGR--SP-KGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVK-VEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMID 230 (391)
T ss_dssp ECCS--SE-EEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE-CSSEEEEEEECTTSSEEEEEEECSSCCEEEEEE
T ss_pred ecCC--Cc-ceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEe-cCCCccceEECCCCCEEEEEecCcCCCcEEEEE
Confidence 7642 23 347899999887 5677889999999764 333333 4566777766 788888888 689999999
Q ss_pred cCCCeeeeeeccCCCcccCcceEEEEEeC-C-eE-EEEeCCCeEEEEEecCCcceeEEEecc
Q 008820 491 LAGDEFEEDVIPTGAIPCGSVITALLYWQ-G-KL-FVGCADRTVKIALCNRQIPEIFSLLLH 549 (552)
Q Consensus 491 ~~~~~~~~~~~~~~~~~~~~~v~~l~~~~-~-~l-~s~s~Dg~v~iw~~~~~~~~~~~~~gh 549 (552)
+.+++....+.. ...+.+++|++ + .+ ++++.|+.|++||+. +...+..+..|
T Consensus 231 ~~~~~~~~~~~~------~~~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~-~~~~~~~~~~~ 285 (391)
T 1l0q_A 231 TGTNKITARIPV------GPDPAGIAVTPDGKKVYVALSFXNTVSVIDTA-TNTITATMAVG 285 (391)
T ss_dssp TTTTEEEEEEEC------CSSEEEEEECTTSSEEEEEETTTTEEEEEETT-TTEEEEEEECS
T ss_pred CCCCeEEEEEec------CCCccEEEEccCCCEEEEEcCCCCEEEEEECC-CCcEEEEEECC
Confidence 998876655443 23478899995 3 45 567889999999998 45556666554
No 117
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.95 E-value=3.2e-25 Score=218.91 Aligned_cols=260 Identities=14% Similarity=0.188 Sum_probs=195.0
Q ss_pred CCccccceeeecCcceEEEeeCCCeEEEEEee-------cCccceEEEEEc--CCEE-EEEeCCCcEEEEeCCCCeEEEE
Q 008820 218 DGADIDQARAAGGVKDLVNGLSKGNVKFKDLQ-------GHRDCVTGLAVG--GGFL-FSSSFDKSIHVWSLKDFSHVHT 287 (552)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-------~H~~~V~~l~~s--~~~l-~s~s~dg~I~iwd~~~~~~~~~ 287 (552)
+...+.++.+++++..++++..+ .+++|++. .+...+..+++. ++.+ ++++.|++|++||..+++.+..
T Consensus 18 h~~~V~~v~fs~dg~~la~g~~~-~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~~~~~ 96 (355)
T 3vu4_A 18 VSNPVTDYEFNQDQSCLILSTLK-SFEIYNVHPVAHIMSQEMRHLSKVRMLHRTNYVAFVTGVKEVVHIWDDVKKQDVSR 96 (355)
T ss_dssp -CCCCCEEEECTTSSEEEEECSS-EEEEEEETTEEEEEEEECSCCCEEEECTTSSEEEEECSSTTEEEEEETTTTEEEEE
T ss_pred CCCceEEEEECCCCCEEEEEcCC-EEEEEecCCcceeeeeecCCeEEEEEcCCCCEEEEEECCccEEEEEECCCCcEEEE
Confidence 34568889999999988888765 46788743 222346666766 5555 6788899999999999999998
Q ss_pred EeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCC-CCCccccccccCCCceeeeEEEEeeCCCEEEE--eeCCCcE
Q 008820 288 FKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFP-LGHEPLKKWNEEKDWRYSGIHALTTSGRYLYT--GSGDRTI 364 (552)
Q Consensus 288 ~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s--gs~dg~i 364 (552)
+. |...|.+++|+++ .++++ .|+.|++||+.+. +....+.. ...+.++++ +.+++ |+.||.|
T Consensus 97 ~~-~~~~v~~v~~~~~---~~~~~-~~~~i~i~d~~~~~~~~~~~~~--------~~~~~~~s~--~~la~~sg~~~g~v 161 (355)
T 3vu4_A 97 IK-VDAPVKDLFLSRE---FIVVS-YGDVISVFKFGNPWKRITDDIR--------FGGVCEFSN--GLLVYSNEFNLGQI 161 (355)
T ss_dssp EE-CSSCEEEEEECSS---EEEEE-ETTEEEEEESSTTCCBSSCCEE--------EEEEEEEET--TEEEEEESSCTTCE
T ss_pred EE-CCCceEEEEEcCC---EEEEE-EcCEEEEEECCCCceeeEEecc--------CCceEEEEc--cEEEEeCCCcCcEE
Confidence 87 6779999999764 33333 4789999999876 33333322 234556666 55555 6899999
Q ss_pred EEEECCCCc----------------eeEEecCCCCCeEEEEEe--CCEEEEEeCCCc-EEEEECCCCceeEEEe-cCCCC
Q 008820 365 KAWSLLDGT----------------LSCTMSGHKSAVSTLAVC--NGVLYSGSRDGT-IRLWSLSDHSLLTVLE-EDSSG 424 (552)
Q Consensus 365 ~iwd~~~~~----------------~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~-i~iwd~~~~~~~~~~~-~~~~~ 424 (552)
++||+++++ .+..+.+|...|++++|+ +.+|++|+.|++ |++||+++++.+..+. ..+..
T Consensus 162 ~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~~ 241 (355)
T 3vu4_A 162 HITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLDRA 241 (355)
T ss_dssp EEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECTTCCS
T ss_pred EEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCCC
Confidence 999998865 277889999999999999 349999999999 9999999999999998 32556
Q ss_pred ceEEEEEEcCCCCEEEEEECCCcEEEEeCCcce----eeeec---------------------cc--ceEEEEEecCCEE
Q 008820 425 AVSSVLSLTAVQHTLVVSHESGSIKVWRNDKFM----KSMQT---------------------HK--GSVFAVFLEGKWL 477 (552)
Q Consensus 425 ~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~~~~----~~~~~---------------------h~--~~v~~v~~~~~~l 477 (552)
.+.+ ++|+|++++|++++.|++|++||+.... ..+.. +. ..+.++..+++.|
T Consensus 242 ~v~~-~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l 320 (355)
T 3vu4_A 242 DVVD-MKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESSLV 320 (355)
T ss_dssp CEEE-EEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSEEE
T ss_pred cEEE-EEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCceEEEEeCCCCEE
Confidence 6666 6999999999999999999999975321 11100 11 1333344489999
Q ss_pred EEEeCCCeEEEEecCCC
Q 008820 478 FTGGWDKTVSVQELAGD 494 (552)
Q Consensus 478 ~sgs~dg~i~iwd~~~~ 494 (552)
++++.||.+++|++..+
T Consensus 321 ~~~~~dg~~~~~~~~~~ 337 (355)
T 3vu4_A 321 VVWPHTRMIETFKVVFD 337 (355)
T ss_dssp EEETTTTEEEEEEEEEE
T ss_pred EEEeCCCeEEEEEEEcC
Confidence 99999999999998643
No 118
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.95 E-value=1.4e-25 Score=227.50 Aligned_cols=257 Identities=15% Similarity=0.203 Sum_probs=191.6
Q ss_pred EEEEeCCCCeE-EEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCC-------CCccccccccCCCceeeeE
Q 008820 274 IHVWSLKDFSH-VHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPL-------GHEPLKKWNEEKDWRYSGI 345 (552)
Q Consensus 274 I~iwd~~~~~~-~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~-------~~~~~~~~~~~~~~~~~~~ 345 (552)
+..+...+++. ......|.+.|++++|+|+++.++++++.||.|++||+.... .......+..+.. ....
T Consensus 109 ~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~--~v~~ 186 (430)
T 2xyi_A 109 FGGFGSVCGKIEIEIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQK--EGYG 186 (430)
T ss_dssp ---------CEEEEEEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSS--CCCC
T ss_pred cccccCCCCceEEEEEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCC--CeEE
Confidence 33343334433 244567999999999999877899999999999999998621 1222333333322 1223
Q ss_pred EEEeeCCC-EEEEeeCCCcEEEEECCCCce-------eEEecCCCCCeEEEEEeC---CEEEEEeCCCcEEEEECCCC--
Q 008820 346 HALTTSGR-YLYTGSGDRTIKAWSLLDGTL-------SCTMSGHKSAVSTLAVCN---GVLYSGSRDGTIRLWSLSDH-- 412 (552)
Q Consensus 346 ~~~~~~~~-~l~sgs~dg~i~iwd~~~~~~-------~~~~~~h~~~v~~l~~~~---~~l~s~~~dg~i~iwd~~~~-- 412 (552)
.++++++. +|++|+.||.|++||+.++.. ...+.+|...|.+++|++ .+|++++.||.|++||++++
T Consensus 187 l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~ 266 (430)
T 2xyi_A 187 LSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNT 266 (430)
T ss_dssp EEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCS
T ss_pred EEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCC
Confidence 47788877 999999999999999987422 456778999999999983 38999999999999999987
Q ss_pred -ceeEEEecCCCCceEEEEEEcCCCC-EEEEEECCCcEEEEeCCc---ceeeeecccceEEEEEe--cC-CEEEEEeCCC
Q 008820 413 -SLLTVLEEDSSGAVSSVLSLTAVQH-TLVVSHESGSIKVWRNDK---FMKSMQTHKGSVFAVFL--EG-KWLFTGGWDK 484 (552)
Q Consensus 413 -~~~~~~~~~~~~~~~~~~~~s~~~~-~l~~g~~dg~i~iwd~~~---~~~~~~~h~~~v~~v~~--~~-~~l~sgs~dg 484 (552)
+.+..+..+ ...+.+ ++|+|++. ++++|+.||.|++||++. ++..+..|...|.++.| ++ .+|++++.||
T Consensus 267 ~~~~~~~~~~-~~~v~~-i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~ 344 (430)
T 2xyi_A 267 SKPSHTVDAH-TAEVNC-LSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDR 344 (430)
T ss_dssp SSCSEEEECC-SSCEEE-EEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTS
T ss_pred CcceeEeecC-CCCeEE-EEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCC
Confidence 566677654 344554 69999887 789999999999999764 57788899999999988 55 5799999999
Q ss_pred eEEEEecCCCee------------eeeeccCCCcccCcceEEEEEeCC---eEEEEeCCCeEEEEEec
Q 008820 485 TVSVQELAGDEF------------EEDVIPTGAIPCGSVITALLYWQG---KLFVGCADRTVKIALCN 537 (552)
Q Consensus 485 ~i~iwd~~~~~~------------~~~~~~~~~~~~~~~v~~l~~~~~---~l~s~s~Dg~v~iw~~~ 537 (552)
.|++||+..... ....... .+...|.+++|+++ .+++++.||.|+||+++
T Consensus 345 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~---~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~ 409 (430)
T 2xyi_A 345 RLHVWDLSKIGEEQSTEDAEDGPPELLFIHG---GHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMA 409 (430)
T ss_dssp CCEEEEGGGTTCCCCHHHHHHCCTTEEEECC---CCSSCEEEEEECSSSTTEEEEEETTSEEEEEEEC
T ss_pred cEEEEeCCCCccccCccccccCCcceEEEcC---CCCCCceEEEECCCCCCEEEEEECCCCEEEeEcc
Confidence 999999976211 1111111 23667999999963 69999999999999997
No 119
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.95 E-value=8.9e-26 Score=221.91 Aligned_cols=257 Identities=11% Similarity=0.033 Sum_probs=192.7
Q ss_pred cCcceEEEeeCCCeEEEEEeecCc-------cceEEEEEcCCEEEEEeCCCcEEEEeCC---------CCeEEEEEe-CC
Q 008820 229 GGVKDLVNGLSKGNVKFKDLQGHR-------DCVTGLAVGGGFLFSSSFDKSIHVWSLK---------DFSHVHTFK-GH 291 (552)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~l~~H~-------~~V~~l~~s~~~l~s~s~dg~I~iwd~~---------~~~~~~~~~-~h 291 (552)
.++..++++..++.+++|++.... ..|.++.++.. +++++.|++|++|+.. +++.+..+. +|
T Consensus 46 ~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~~~~v~~~~~~~~-~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~ 124 (343)
T 3lrv_A 46 YDKWVCMCRCEDGALHFTQLKDSKTITTITTPNPRTGGEHPA-IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDS 124 (343)
T ss_dssp EEEEEEEEEEETTEEEEEEESSSSCEEEEEEECCCTTCCCCS-EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECCC
T ss_pred CCCCEEEEECCCCcEEEEECCCCcEEEEEecCCceeeeeCCc-eEEecCCCeEEEEEccCceEEeecCCcceeEEeecCC
Confidence 456789999999999999986443 45666666645 9999999999999655 555555554 68
Q ss_pred CCCeEEEEEec--CCCCEEEEEcCCCcEEEEeCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEEC
Q 008820 292 DHKVMAVVYVD--EDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSL 369 (552)
Q Consensus 292 ~~~v~~v~~~~--~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~ 369 (552)
.+.|.+++|+| ++. ++++++.||+|++||++++... .....+.. ......+++|++.+|++|+.||.|++||+
T Consensus 125 ~~~v~~~~~~~~~~~~-~l~s~s~dg~i~~wd~~~~~~~---~~~~~~~~-~~i~~~~~~pdg~~lasg~~dg~i~iwd~ 199 (343)
T 3lrv_A 125 ANEIIYMYGHNEVNTE-YFIWADNRGTIGFQSYEDDSQY---IVHSAKSD-VEYSSGVLHKDSLLLALYSPDGILDVYNL 199 (343)
T ss_dssp SSCEEEEECCC---CC-EEEEEETTCCEEEEESSSSCEE---EEECCCSS-CCCCEEEECTTSCEEEEECTTSCEEEEES
T ss_pred CCCEEEEEcCCCCCCC-EEEEEeCCCcEEEEECCCCcEE---EEEecCCC-CceEEEEECCCCCEEEEEcCCCEEEEEEC
Confidence 88999999999 654 7899999999999999876542 22212211 12345688999999999999999999999
Q ss_pred CCCcee-EEecC-CCCCeEEEEEe-C-CEEEEEeCCCcEEEEECCCCceeEEEecC--CCCceE-EEEEEcCCCCEEEEE
Q 008820 370 LDGTLS-CTMSG-HKSAVSTLAVC-N-GVLYSGSRDGTIRLWSLSDHSLLTVLEED--SSGAVS-SVLSLTAVQHTLVVS 442 (552)
Q Consensus 370 ~~~~~~-~~~~~-h~~~v~~l~~~-~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~--~~~~~~-~~~~~s~~~~~l~~g 442 (552)
++++.+ ..+.. |..+|++++|+ + .+|++++ |++|++||+++++.+..+... +...+. ..++|+|++++|+++
T Consensus 200 ~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~ 278 (343)
T 3lrv_A 200 SSPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAY 278 (343)
T ss_dssp SCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEE
T ss_pred CCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEEEe
Confidence 999988 78888 99999999999 3 3888888 559999999998766544321 001111 247999999999999
Q ss_pred EC-CCcEEEEeCCcceeeeecccceEEEEEe-----cCCEEEEEeCCCeEEEEecCCC
Q 008820 443 HE-SGSIKVWRNDKFMKSMQTHKGSVFAVFL-----EGKWLFTGGWDKTVSVQELAGD 494 (552)
Q Consensus 443 ~~-dg~i~iwd~~~~~~~~~~h~~~v~~v~~-----~~~~l~sgs~dg~i~iwd~~~~ 494 (552)
+. |+.|++|+..+....+.. .++..+.+ +...+++++.||.+.++-....
T Consensus 279 s~~d~~i~v~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~~~ 334 (343)
T 3lrv_A 279 SNESNSLTIYKFDKKTKNWTK--DEESALCLQSDTADFTDMDVVCGDGGIAAILKTND 334 (343)
T ss_dssp ETTTTEEEEEEECTTTCSEEE--EEEEECCC----CCCCEEEEEEETTEEEEEEECSS
T ss_pred cCCCCcEEEEEEcccccceEe--cCceeEecCccccccceeEEEecCCceEEEEecCC
Confidence 98 999999997544333332 44445544 5678999999999998865443
No 120
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.94 E-value=1.1e-23 Score=210.67 Aligned_cols=246 Identities=13% Similarity=0.152 Sum_probs=191.5
Q ss_pred EEEEEeecCccceEEEEEc--CCEE-EEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEE
Q 008820 243 VKFKDLQGHRDCVTGLAVG--GGFL-FSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFV 319 (552)
Q Consensus 243 ~~~~~l~~H~~~V~~l~~s--~~~l-~s~s~dg~I~iwd~~~~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~v 319 (552)
..+..+.+|. .+.+++|+ ++++ ++++.|++|++||+.+++.+..+..+. .+.+++|+|++..++++++.|+.|++
T Consensus 23 ~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-~v~~~~~spdg~~l~~~~~~~~~v~v 100 (391)
T 1l0q_A 23 KVTATIPVGS-NPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQGVAVSPDGKQVYVTNMASSTLSV 100 (391)
T ss_dssp EEEEEEECSS-SEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEETTTTEEEE
T ss_pred eEEEEeecCC-CcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC-CccceEECCCCCEEEEEECCCCEEEE
Confidence 3444556665 48999999 6665 677799999999999999999988665 89999999988877788888999999
Q ss_pred EeCCCCCCCccccccccCCCceeeeEEEEeeCCCEE-EEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe-CC-EE-
Q 008820 320 WSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYL-YTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC-NG-VL- 395 (552)
Q Consensus 320 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~-~~-~l- 395 (552)
||+.+++....+. .+.. ....+++++++.+ ++++.|+.|++||+.+++.+..+..+. .+.+++|+ ++ .+
T Consensus 101 ~d~~~~~~~~~~~---~~~~---~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~-~~~~~~~~~dg~~l~ 173 (391)
T 1l0q_A 101 IDTTSNTVAGTVK---TGKS---PLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGR-SPKGIAVTPDGTKVY 173 (391)
T ss_dssp EETTTTEEEEEEE---CSSS---EEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECCS-SEEEEEECTTSSEEE
T ss_pred EECCCCeEEEEEe---CCCC---cceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecCC-CcceEEECCCCCEEE
Confidence 9998764433222 2221 2345788899866 788889999999999999998887654 56899999 33 55
Q ss_pred EEEeCCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEE---CCCcEEEEeCCc--ceeeeecccceEEEE
Q 008820 396 YSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSH---ESGSIKVWRNDK--FMKSMQTHKGSVFAV 470 (552)
Q Consensus 396 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~---~dg~i~iwd~~~--~~~~~~~h~~~v~~v 470 (552)
++++.|+.|++||+++++....+... ..... ++++|+++++++++ .++.|++||... .+..+..|.. +.++
T Consensus 174 ~~~~~~~~v~~~d~~~~~~~~~~~~~--~~~~~-~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~-~~~~ 249 (391)
T 1l0q_A 174 VANFDSMSISVIDTVTNSVIDTVKVE--AAPSG-IAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGPD-PAGI 249 (391)
T ss_dssp EEETTTTEEEEEETTTTEEEEEEECS--SEEEE-EEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEECCSS-EEEE
T ss_pred EEeCCCCEEEEEECCCCeEEEEEecC--CCccc-eEECCCCCEEEEEecCcCCCcEEEEECCCCeEEEEEecCCC-ccEE
Confidence 67788999999999999888777643 33343 69999999999888 689999999653 4556666654 5566
Q ss_pred Ee--cCCEE-EEEeCCCeEEEEecCCCeeeeeec
Q 008820 471 FL--EGKWL-FTGGWDKTVSVQELAGDEFEEDVI 501 (552)
Q Consensus 471 ~~--~~~~l-~sgs~dg~i~iwd~~~~~~~~~~~ 501 (552)
.+ ++++| ++++.|+.|++||+.+++....+.
T Consensus 250 ~~s~dg~~l~~s~~~d~~v~v~d~~~~~~~~~~~ 283 (391)
T 1l0q_A 250 AVTPDGKKVYVALSFXNTVSVIDTATNTITATMA 283 (391)
T ss_dssp EECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE
T ss_pred EEccCCCEEEEEcCCCCEEEEEECCCCcEEEEEE
Confidence 55 78877 677889999999999887665543
No 121
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.94 E-value=1e-24 Score=218.41 Aligned_cols=228 Identities=11% Similarity=0.027 Sum_probs=155.3
Q ss_pred cCCCCEEEEEcCCCcEEEEeCCCCCCCc--cccccccCCCceeeeEEEEee--------CCCEEEEeeCCCcEEEEECCC
Q 008820 302 DEDQPLCISGDSGGGIFVWSFSFPLGHE--PLKKWNEEKDWRYSGIHALTT--------SGRYLYTGSGDRTIKAWSLLD 371 (552)
Q Consensus 302 ~~~~~~l~s~~~dg~i~vwd~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~--------~~~~l~sgs~dg~i~iwd~~~ 371 (552)
+.+..++++++.|++|++||.+.+.... .+..+.+|... . ...+|+| ++++|++|+.|++|++||+++
T Consensus 98 ~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~-v-~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~ 175 (393)
T 4gq1_A 98 PVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNF-V-NDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTD 175 (393)
T ss_dssp CEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSC-E-EEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEET
T ss_pred CCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCc-e-EEEEEccccccccCCCCCEEEEEECCCeEEEEECCC
Confidence 3345579999999999999998764322 23344444442 2 2235555 678999999999999999999
Q ss_pred CceeEEecCCCCCeEEEEEeC-C--EEEEEeCCCcEEEEECCCCceeEEEec------------------------CCCC
Q 008820 372 GTLSCTMSGHKSAVSTLAVCN-G--VLYSGSRDGTIRLWSLSDHSLLTVLEE------------------------DSSG 424 (552)
Q Consensus 372 ~~~~~~~~~h~~~v~~l~~~~-~--~l~s~~~dg~i~iwd~~~~~~~~~~~~------------------------~~~~ 424 (552)
+.++..+.+|...|.+++|++ + +|++++.|++|++||+++++....... .+..
T Consensus 176 ~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 255 (393)
T 4gq1_A 176 EGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIAS 255 (393)
T ss_dssp TEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSS
T ss_pred CceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccc
Confidence 988888888999999999993 2 799999999999999998765443321 1223
Q ss_pred ceEEEEEEcCCCCEEEEEECCCcEEEEeCCc--ceeeeecccceEEEE-------------------E-e--cCCEEEEE
Q 008820 425 AVSSVLSLTAVQHTLVVSHESGSIKVWRNDK--FMKSMQTHKGSVFAV-------------------F-L--EGKWLFTG 480 (552)
Q Consensus 425 ~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~~--~~~~~~~h~~~v~~v-------------------~-~--~~~~l~sg 480 (552)
.+..+..+.++++.+++++.|+++++||+.. ....+..|...+..+ . + ++.++++|
T Consensus 256 ~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg 335 (393)
T 4gq1_A 256 SLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAH 335 (393)
T ss_dssp SCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEE
T ss_pred cceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEE
Confidence 3444444568999999999999999999642 333344443333221 1 1 44577888
Q ss_pred eCCCeEEEEecCCCeeeeeeccCCCcccCcceEEEEEeC-C-eEEEEeCCCeEEEEEec
Q 008820 481 GWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQ-G-KLFVGCADRTVKIALCN 537 (552)
Q Consensus 481 s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~~-~-~l~s~s~Dg~v~iw~~~ 537 (552)
+.||.|++||+.+++.......+ ...|.+++|+| + .|++++.|| +.+|++.
T Consensus 336 s~Dg~V~lwd~~~~~~~~~~~~~-----~~~V~svafspdG~~LA~as~~G-v~lvrL~ 388 (393)
T 4gq1_A 336 SQHGLIQLINTYEKDSNSIPIQL-----GMPIVDFCWHQDGSHLAIATEGS-VLLTRLM 388 (393)
T ss_dssp TTTTEEEEEETTCTTCCEEEEEC-----SSCEEEEEECTTSSEEEEEESSE-EEEEEEG
T ss_pred CCCCEEEEEECCCCcEEEEecCC-----CCcEEEEEEcCCCCEEEEEeCCC-eEEEEEe
Confidence 99999999999987665544332 56799999995 3 377777655 7777664
No 122
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.94 E-value=1.1e-23 Score=213.68 Aligned_cols=277 Identities=14% Similarity=0.126 Sum_probs=209.4
Q ss_pred EEEEEeecCccceEEEEEc--CCEEEEEeCCCcEEEEeCCCCeEEE-----EEeCCCCCeEEEEEecCCCCEEEEEcCCC
Q 008820 243 VKFKDLQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVH-----TFKGHDHKVMAVVYVDEDQPLCISGDSGG 315 (552)
Q Consensus 243 ~~~~~l~~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~~~~~-----~~~~h~~~v~~v~~~~~~~~~l~s~~~dg 315 (552)
..+..+..|. .+.+++|+ +.++++++.|++|++||+.+++... .+.+|...|.+++|+++ +.++++++.|+
T Consensus 114 ~~~~~~~~~~-~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~s~~~d~ 191 (433)
T 3bws_A 114 RFISRFKTGF-QPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEH-NELWVSQMQAN 191 (433)
T ss_dssp EEEEEEECSS-CBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGG-TEEEEEEGGGT
T ss_pred eEEEEEcCCC-CceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCC-CEEEEEECCCC
Confidence 3455565554 45589998 6677788889999999999999887 34578899999999774 55889999999
Q ss_pred cEEEEeCCCCCCCccccccccCCCceeeeEEEEeeCCCEEE-EeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe-CC
Q 008820 316 GIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLY-TGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC-NG 393 (552)
Q Consensus 316 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~-~~ 393 (552)
.|++||+++++....+. .+. ......+++++++.++ +++.|+.|++||+++++.+..+..+ ..+.+++|+ ++
T Consensus 192 ~v~~~d~~~~~~~~~~~---~~~--~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~~g 265 (433)
T 3bws_A 192 AVHVFDLKTLAYKATVD---LTG--KWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKI-GLPRGLLLSKDG 265 (433)
T ss_dssp EEEEEETTTCCEEEEEE---CSS--SSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCC-SEEEEEEECTTS
T ss_pred EEEEEECCCceEEEEEc---CCC--CCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCC-CCceEEEEcCCC
Confidence 99999998654333322 221 1223457888888774 5558999999999999998888754 458999998 33
Q ss_pred -EEEEEe--------CCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEE-EEEECCCcEEEEeCCc--ceeeee
Q 008820 394 -VLYSGS--------RDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTL-VVSHESGSIKVWRNDK--FMKSMQ 461 (552)
Q Consensus 394 -~l~s~~--------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l-~~g~~dg~i~iwd~~~--~~~~~~ 461 (552)
.+++++ .|+.|++||+++++.+..+... ..... ++++|+++.+ ++++.|+.|++||..+ ....+.
T Consensus 266 ~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~--~~~~~-~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~ 342 (433)
T 3bws_A 266 KELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPP--GNKRH-IVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIP 342 (433)
T ss_dssp SEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEE--ECEEE-EEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEE
T ss_pred CEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCC--CCcce-EEECCCCCEEEEEecCCCEEEEEECCCCcEEEEec
Confidence 788877 5889999999999887776432 23333 6899999755 5668899999999753 344443
Q ss_pred cccceEEEEEe--cCCEEEEEeC---------------CCeEEEEecCCCeeeeeeccCCCcccCcceEEEEEeCC--eE
Q 008820 462 THKGSVFAVFL--EGKWLFTGGW---------------DKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQG--KL 522 (552)
Q Consensus 462 ~h~~~v~~v~~--~~~~l~sgs~---------------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~--~l 522 (552)
+...+.++.+ +++++++++. ||.|++||+.+++....... ...+.+++|+++ .|
T Consensus 343 -~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~------~~~~~~~~~s~dg~~l 415 (433)
T 3bws_A 343 -VFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEA------GNQPTGLDVSPDNRYL 415 (433)
T ss_dssp -CSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEEC------SSSEEEEEECTTSCEE
T ss_pred -CCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecC------CCCCceEEEcCCCCEE
Confidence 6667777776 7888888876 57999999998877665543 345899999953 47
Q ss_pred EEEeC-CCeEEEEEec
Q 008820 523 FVGCA-DRTVKIALCN 537 (552)
Q Consensus 523 ~s~s~-Dg~v~iw~~~ 537 (552)
++++. |+.|++|+++
T Consensus 416 ~~~~~~d~~i~v~~~~ 431 (433)
T 3bws_A 416 VISDFLDHQIRVYRRD 431 (433)
T ss_dssp EEEETTTTEEEEEEET
T ss_pred EEEECCCCeEEEEEec
Confidence 77764 9999999987
No 123
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.93 E-value=3.9e-25 Score=221.45 Aligned_cols=225 Identities=12% Similarity=0.130 Sum_probs=159.5
Q ss_pred eeeecCcceEEEeeCCCeEEEEE--------------eecCccceEEEEEc----------CCEEEEEeCCCcEEEEeCC
Q 008820 225 ARAAGGVKDLVNGLSKGNVKFKD--------------LQGHRDCVTGLAVG----------GGFLFSSSFDKSIHVWSLK 280 (552)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~--------------l~~H~~~V~~l~~s----------~~~l~s~s~dg~I~iwd~~ 280 (552)
.........++++..++.+++|+ +.||.+.|++++|+ +++|+||+.|++|+|||+.
T Consensus 95 ~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~ 174 (393)
T 4gq1_A 95 NSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLT 174 (393)
T ss_dssp --CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEE
T ss_pred eecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECC
Confidence 34455667788999999999986 45899999999995 5799999999999999999
Q ss_pred CCeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCcccccccc---------------------CCC
Q 008820 281 DFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNE---------------------EKD 339 (552)
Q Consensus 281 ~~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~---------------------~~~ 339 (552)
++.++..+..|...|.+++|+|++..+|++++.|++|++||+.++........... .+.
T Consensus 175 ~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~ 254 (393)
T 4gq1_A 175 DEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIA 254 (393)
T ss_dssp TTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCS
T ss_pred CCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeeccccc
Confidence 99988888899999999999998888999999999999999987654322211100 011
Q ss_pred ceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEE------------------EEe---CC-EEEE
Q 008820 340 WRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTL------------------AVC---NG-VLYS 397 (552)
Q Consensus 340 ~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l------------------~~~---~~-~l~s 397 (552)
.....+....++++.+++++.|+++++||+..++....+..|...+..+ .++ ++ ++++
T Consensus 255 ~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 334 (393)
T 4gq1_A 255 SSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATA 334 (393)
T ss_dssp SSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEE
T ss_pred ccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEE
Confidence 1122233345789999999999999999998887766665555444333 222 23 5677
Q ss_pred EeCCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEECCCcEEEEe
Q 008820 398 GSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWR 452 (552)
Q Consensus 398 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd 452 (552)
|+.||+|++||+.+++.......+. ..+.+ ++|+|+|++|++++.+| +.+|+
T Consensus 335 gs~Dg~V~lwd~~~~~~~~~~~~~~-~~V~s-vafspdG~~LA~as~~G-v~lvr 386 (393)
T 4gq1_A 335 HSQHGLIQLINTYEKDSNSIPIQLG-MPIVD-FCWHQDGSHLAIATEGS-VLLTR 386 (393)
T ss_dssp ETTTTEEEEEETTCTTCCEEEEECS-SCEEE-EEECTTSSEEEEEESSE-EEEEE
T ss_pred ECCCCEEEEEECCCCcEEEEecCCC-CcEEE-EEEcCCCCEEEEEeCCC-eEEEE
Confidence 8899999999999998887776654 45555 69999999999998776 55555
No 124
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.93 E-value=2.3e-24 Score=204.01 Aligned_cols=198 Identities=15% Similarity=0.118 Sum_probs=150.8
Q ss_pred cCccceEEEEEc-CCEEEEEe--CCCcEEEEeC-CCCeEEEEEeCCCCCeEEEEEec--CCCCEEEEEcCCCcEEEEeCC
Q 008820 250 GHRDCVTGLAVG-GGFLFSSS--FDKSIHVWSL-KDFSHVHTFKGHDHKVMAVVYVD--EDQPLCISGDSGGGIFVWSFS 323 (552)
Q Consensus 250 ~H~~~V~~l~~s-~~~l~s~s--~dg~I~iwd~-~~~~~~~~~~~h~~~v~~v~~~~--~~~~~l~s~~~dg~i~vwd~~ 323 (552)
+|...|.++ . ++.+.+++ .|+.|++|++ .+++.+..+.+|...++.++|++ .++.+|++++.|++|++||+.
T Consensus 134 g~~~~v~~l--~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~ 211 (356)
T 2w18_A 134 GNIKAVLGL--TKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLK 211 (356)
T ss_dssp EEEEEEEEE--TTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETT
T ss_pred CCeEEEEec--CCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECC
Confidence 344444443 5 55555543 5999999999 55899999999999999999987 345689999999999999999
Q ss_pred CCCCCccccccccCCC-ceeeeEEEEeeCCCEE------------EEeeCCCcEEEEECCCCceeEEe-----cCCCCCe
Q 008820 324 FPLGHEPLKKWNEEKD-WRYSGIHALTTSGRYL------------YTGSGDRTIKAWSLLDGTLSCTM-----SGHKSAV 385 (552)
Q Consensus 324 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l------------~sgs~dg~i~iwd~~~~~~~~~~-----~~h~~~v 385 (552)
+++....+. .+.. .......+|+|++.++ ++|+.|++|++||..+++.+..+ .+|...+
T Consensus 212 TGk~l~tL~---g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~ 288 (356)
T 2w18_A 212 TGQLLKKMH---IDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRF 288 (356)
T ss_dssp TCCEEEEEE---CCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCE
T ss_pred CCcEEEEEc---CCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCccee
Confidence 876544443 2221 1122234788888865 67889999999999999988765 4777777
Q ss_pred EEEEEeCCEEEEEeCCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEECCCcEEEEeC
Q 008820 386 STLAVCNGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRN 453 (552)
Q Consensus 386 ~~l~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~ 453 (552)
.+..+++..+++++.|++|++||+.+++++.++..|...... .++|+|+|++|++|+.|++|+|||.
T Consensus 289 lsg~~sg~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs-~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 289 LEGDVKDHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWS-FVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp EEEEEETTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCC-EEEECSSSSEEEEECTTSCEEEEEE
T ss_pred EccccCCCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEE-EEEECCCCCEEEEEECCCcEEEecC
Confidence 666666779999999999999999999999999876544443 3699999999999999999999984
No 125
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.93 E-value=7.4e-25 Score=237.79 Aligned_cols=233 Identities=21% Similarity=0.277 Sum_probs=187.7
Q ss_pred CCccccceeeecCcceEEEeeCCCeEEEEEe-----------ecCccceEEEEEc----CCEEEEEeCCCcEEEEeCCCC
Q 008820 218 DGADIDQARAAGGVKDLVNGLSKGNVKFKDL-----------QGHRDCVTGLAVG----GGFLFSSSFDKSIHVWSLKDF 282 (552)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-----------~~H~~~V~~l~~s----~~~l~s~s~dg~I~iwd~~~~ 282 (552)
+...+..+.+++.+..++++..++.+.+|++ .+|.++|++++|+ +++|++|+.||+|++||+.++
T Consensus 8 H~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~ 87 (753)
T 3jro_A 8 HNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENG 87 (753)
T ss_dssp CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETT
T ss_pred CcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCC
Confidence 4456788888888999999999999998875 4799999999997 789999999999999999998
Q ss_pred e--EEEEEeCCCCCeEEEEEecCC-CCEEEEEcCCCcEEEEeCCCCCCCccccccccCCCceeeeEEEEee---------
Q 008820 283 S--HVHTFKGHDHKVMAVVYVDED-QPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTT--------- 350 (552)
Q Consensus 283 ~--~~~~~~~h~~~v~~v~~~~~~-~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 350 (552)
+ .+..+.+|...|.+++|+|+. +.++++|+.||.|++||+.......... ...+.. .....+++|
T Consensus 88 ~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~-~~~~~~--~v~~l~~~p~~~~~~~~~ 164 (753)
T 3jro_A 88 RWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPII-IDAHAI--GVNSASWAPATIEEDGEH 164 (753)
T ss_dssp EEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEE-EECCSS--CEEEEEECCCC-------
T ss_pred cccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeE-eecCCC--ceEEEEecCccccccccc
Confidence 7 778888999999999999973 5688999999999999998764333222 222221 122345666
Q ss_pred ----CCCEEEEeeCCCcEEEEECCCC----ceeEEecCCCCCeEEEEEe-C---C-EEEEEeCCCcEEEEECCCCceeE-
Q 008820 351 ----SGRYLYTGSGDRTIKAWSLLDG----TLSCTMSGHKSAVSTLAVC-N---G-VLYSGSRDGTIRLWSLSDHSLLT- 416 (552)
Q Consensus 351 ----~~~~l~sgs~dg~i~iwd~~~~----~~~~~~~~h~~~v~~l~~~-~---~-~l~s~~~dg~i~iwd~~~~~~~~- 416 (552)
+++.+++|+.||.|++||++++ .+...+.+|...|++++|+ + + ++++++.||.|++||+++++...
T Consensus 165 ~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~ 244 (753)
T 3jro_A 165 NGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWK 244 (753)
T ss_dssp --CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSSSCCB
T ss_pred ccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCCCcce
Confidence 4789999999999999999877 5667788999999999999 4 4 89999999999999998864211
Q ss_pred -EE-e-cCCCCceEEEEEEcCCCCEEEEEECCCcEEEEeCC
Q 008820 417 -VL-E-EDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRND 454 (552)
Q Consensus 417 -~~-~-~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~ 454 (552)
.. . ..+...+.+ ++|+|+++++++|+.||.|++||..
T Consensus 245 ~~~~~~~~~~~~v~~-l~~spdg~~l~s~s~Dg~I~vwd~~ 284 (753)
T 3jro_A 245 KTLLKEEKFPDVLWR-ASWSLSGNVLALSGGDNKVTLWKEN 284 (753)
T ss_dssp CCBSSSSCCSSCCCC-EEECTTTCCEEEECSSSCEECCBCC
T ss_pred eEEeccCCCCCceEE-EEEcCCCCEEEEEcCCCEEEEEecC
Confidence 11 1 112344444 6999999999999999999999965
No 126
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.93 E-value=3e-23 Score=210.59 Aligned_cols=260 Identities=14% Similarity=0.145 Sum_probs=204.5
Q ss_pred cceeeecCcceEEEeeCCCeEEEEEe--------------ecCccceEEEEEc--CCEEEEEeCCCcEEEEeCCCCeEEE
Q 008820 223 DQARAAGGVKDLVNGLSKGNVKFKDL--------------QGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVH 286 (552)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~l--------------~~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~~~~~ 286 (552)
..+.+++++..++++..++.+.+|++ .+|.+.|.+++|+ ++++++++.|+.|++||+++++.+.
T Consensus 126 ~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~ 205 (433)
T 3bws_A 126 KSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKA 205 (433)
T ss_dssp CCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEE
T ss_pred eEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEE
Confidence 35666665556666666777777764 3788899999998 8899999999999999999999999
Q ss_pred EEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEee-------
Q 008820 287 TFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGS------- 359 (552)
Q Consensus 287 ~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs------- 359 (552)
.+..|...+.+++|+|++..++++++.|+.|++||++++.....+ .... .....+++++++.+++++
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~---~~~~---~~~~~~~~~~g~~l~~~~~~~~~~~ 279 (433)
T 3bws_A 206 TVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKT---DKIG---LPRGLLLSKDGKELYIAQFSASNQE 279 (433)
T ss_dssp EEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEC---CCCS---EEEEEEECTTSSEEEEEEEESCTTC
T ss_pred EEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEe---cCCC---CceEEEEcCCCCEEEEEECCCCccc
Confidence 999999999999999988877788889999999999865432222 2211 123457888999888887
Q ss_pred -CCCcEEEEECCCCceeEEecCCCCCeEEEEEe-CC--EEEEEeCCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCC
Q 008820 360 -GDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC-NG--VLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAV 435 (552)
Q Consensus 360 -~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~-~~--~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~ 435 (552)
.||.|++||+.+++.+..+. |...+.+++|+ ++ ++++++.|+.|++||+.+++.+..+... ..+.. ++++|+
T Consensus 280 ~~dg~i~~~d~~~~~~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~--~~~~~-~~~s~d 355 (433)
T 3bws_A 280 SGGGRLGIYSMDKEKLIDTIG-PPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIPVF--DKPNT-IALSPD 355 (433)
T ss_dssp SCCEEEEEEETTTTEEEEEEE-EEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEECS--SSEEE-EEECTT
T ss_pred cCCCeEEEEECCCCcEEeecc-CCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEecCC--CCCCe-EEEcCC
Confidence 58899999999998877663 55678999999 33 5567789999999999999888877643 33444 799999
Q ss_pred CCEEEEEEC---------------CCcEEEEeCCc--ceeeeecccceEEEEEe--cCCEEEEEeC-CCeEEEEecCC
Q 008820 436 QHTLVVSHE---------------SGSIKVWRNDK--FMKSMQTHKGSVFAVFL--EGKWLFTGGW-DKTVSVQELAG 493 (552)
Q Consensus 436 ~~~l~~g~~---------------dg~i~iwd~~~--~~~~~~~h~~~v~~v~~--~~~~l~sgs~-dg~i~iwd~~~ 493 (552)
++++++++. ||.|++||..+ .+..+.. ...+.++.+ ++++|++++. |+.|++|++++
T Consensus 356 g~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~~ 432 (433)
T 3bws_A 356 GKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEA-GNQPTGLDVSPDNRYLVISDFLDHQIRVYRRDG 432 (433)
T ss_dssp SSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEEC-SSSEEEEEECTTSCEEEEEETTTTEEEEEEETT
T ss_pred CCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecC-CCCCceEEEcCCCCEEEEEECCCCeEEEEEecC
Confidence 999998876 57999999653 4455554 346677766 8999988875 99999999864
No 127
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.89 E-value=1.3e-20 Score=195.81 Aligned_cols=315 Identities=11% Similarity=0.042 Sum_probs=217.1
Q ss_pred cCcceEEEeeCCCeEEEEE---------eecCccceEEEEEc--CCEEEEEeCCCcEEEEeC--CCCeEEEEEeCCCCCe
Q 008820 229 GGVKDLVNGLSKGNVKFKD---------LQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSL--KDFSHVHTFKGHDHKV 295 (552)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~---------l~~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~--~~~~~~~~~~~h~~~v 295 (552)
+.+..+++...++.+.+|+ +..+.. +.+++|+ +++|++++.|++|++||+ .+++.+.++.. ...+
T Consensus 147 p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~-~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~-g~~p 224 (543)
T 1nir_A 147 LPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKI-GIEA 224 (543)
T ss_dssp GGGEEEEEEGGGTEEEEEETTTCCEEEEEECSTT-EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEEC-CSEE
T ss_pred CCCEEEEEEcCCCeEEEEECCCceEEEEEecCcc-cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEec-CCCc
Confidence 3344445555555555544 442323 8899999 899999999999999999 89999999884 4567
Q ss_pred EEEEEec----CCCCEEEEEcCCCcEEEEeCCCCCCCccccccccC------CCceeeeEEEEeeCCC-EEEEeeCCCcE
Q 008820 296 MAVVYVD----EDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEE------KDWRYSGIHALTTSGR-YLYTGSGDRTI 364 (552)
Q Consensus 296 ~~v~~~~----~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~-~l~sgs~dg~i 364 (552)
..++|+| ++..++++...+++|.+||..+.+....+...... +.........+++++. .+++...++.|
T Consensus 225 ~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i 304 (543)
T 1nir_A 225 RSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKV 304 (543)
T ss_dssp EEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEE
T ss_pred ceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeE
Confidence 9999999 88765555556999999999876554443321100 0001122345677655 67778889999
Q ss_pred EEEECCCCceeE--EecCCCCCeEEEEEe-CC-EEEE-EeCCCcEEEEECCCCceeEEEecC---CCCceEEEEEEcCC-
Q 008820 365 KAWSLLDGTLSC--TMSGHKSAVSTLAVC-NG-VLYS-GSRDGTIRLWSLSDHSLLTVLEED---SSGAVSSVLSLTAV- 435 (552)
Q Consensus 365 ~iwd~~~~~~~~--~~~~h~~~v~~l~~~-~~-~l~s-~~~dg~i~iwd~~~~~~~~~~~~~---~~~~~~~~~~~s~~- 435 (552)
.+||..+.+.+. .+. +...+.++.|+ ++ ++++ +..+++|.+||+.+++++..+... +.+.... .++|+
T Consensus 305 ~vvd~~~~~~l~~~~i~-~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~--~~~p~~ 381 (543)
T 1nir_A 305 LLVNYKDIDNLTVTSIG-AAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGAN--FVHPKY 381 (543)
T ss_dssp EEEECTTSSSCEEEEEE-CCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEE--EEETTT
T ss_pred EEEEecCCCcceeEEec-cCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCcc--cCCCCC
Confidence 999998876544 443 56678899999 43 5554 456899999999999998888753 2222222 35676
Q ss_pred CCEEEEEE-CCCcEEEEeC---------CcceeeeecccceEEEEE--ecCCEEEEEe-------CCCeEEEEecCCCee
Q 008820 436 QHTLVVSH-ESGSIKVWRN---------DKFMKSMQTHKGSVFAVF--LEGKWLFTGG-------WDKTVSVQELAGDEF 496 (552)
Q Consensus 436 ~~~l~~g~-~dg~i~iwd~---------~~~~~~~~~h~~~v~~v~--~~~~~l~sgs-------~dg~i~iwd~~~~~~ 496 (552)
+..++++. .|++|.+||. .+.++++.+|...+..+. +++++|++++ .+++|.+||+.+.+.
T Consensus 382 g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~ 461 (543)
T 1nir_A 382 GPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDA 461 (543)
T ss_dssp EEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTS
T ss_pred ccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCC
Confidence 56666665 5899999995 356788888887766555 4999999987 277999999998765
Q ss_pred eeeeccCC----CcccCcceEEEEEeC-C-eEEEE-----eCCCeEEEEEecCCcceeEEEecc
Q 008820 497 EEDVIPTG----AIPCGSVITALLYWQ-G-KLFVG-----CADRTVKIALCNRQIPEIFSLLLH 549 (552)
Q Consensus 497 ~~~~~~~~----~~~~~~~v~~l~~~~-~-~l~s~-----s~Dg~v~iw~~~~~~~~~~~~~gh 549 (552)
........ -..+...+..+.|++ + .++++ +.|+.|.|||.. +.+.+..+.++
T Consensus 462 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~s~~~~~~~~~~i~v~D~~-t~~~~~~i~~~ 524 (543)
T 1nir_A 462 KYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDK-TLKLKAVVKDP 524 (543)
T ss_dssp CCEEECHHHHHCCCSSCCEEEEEEECSSSSEEEEEEECCTTSCCEEEEEETT-TTEEEEEECCT
T ss_pred CeEEeechhhcccCCCCCceEeccCCCCCCEEEEEeecCCCCCCeEEEEECC-CceEEEeecCC
Confidence 52221100 011256789999995 3 35544 247999999987 66666666643
No 128
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.86 E-value=7.4e-20 Score=184.20 Aligned_cols=278 Identities=9% Similarity=0.012 Sum_probs=192.9
Q ss_pred ceEEEEEc---CCEEEEEe----CCC----cEEEEeC--CCCeEE--EEEeCCCCCeEEEEEecC--------------C
Q 008820 254 CVTGLAVG---GGFLFSSS----FDK----SIHVWSL--KDFSHV--HTFKGHDHKVMAVVYVDE--------------D 304 (552)
Q Consensus 254 ~V~~l~~s---~~~l~s~s----~dg----~I~iwd~--~~~~~~--~~~~~h~~~v~~v~~~~~--------------~ 304 (552)
.+...+|. .+.+++|+ .|| +|++||+ .+++.+ ..+.+|...+..+++.+. +
T Consensus 64 ~~~~~~w~~~g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~ 143 (415)
T 2hqs_A 64 EVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFR 143 (415)
T ss_dssp GCCHHHHHTTTCCEEEEEEEEECTTSCEEEEEEEEECSSSTTCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHSSCCCTT
T ss_pred CcCHHHHHhcCCCEEEEEEEEECCCCeEEEEEEEEeCCCCCCCEEeeeEEEcChhHHHHHHHHHHHHHHHHHcCCCCcCC
Confidence 44455554 34566665 467 8999999 899887 558889888887776641 3
Q ss_pred CCEEEEEcC--C---CcEEEEeCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCC---cEEEEECCCCceeE
Q 008820 305 QPLCISGDS--G---GGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDR---TIKAWSLLDGTLSC 376 (552)
Q Consensus 305 ~~~l~s~~~--d---g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg---~i~iwd~~~~~~~~ 376 (552)
..+++++.. + +.|++||++... .. .+..+.. .....+++|+++.|++++.++ .|++||+.+++..
T Consensus 144 ~~l~~~s~~~~~~~~~~i~i~d~~g~~-~~---~l~~~~~--~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~- 216 (415)
T 2hqs_A 144 TRIAYVVQTNGGQFPYELRVSDYDGYN-QF---VVHRSPQ--PLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR- 216 (415)
T ss_dssp CEEEEEEECSSSSCCEEEEEEETTSCS-CE---EEEEESS--CEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-
T ss_pred CEEEEEEecCCCCccceEEEEcCCCCC-CE---EEeCCCC--cceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEE-
Confidence 434333332 2 799999997432 22 2222221 123457899999999999875 9999999998875
Q ss_pred EecCCCCCeEEEEEe-CC-EEE-EEeCCCc--EEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEEC-CC--cE
Q 008820 377 TMSGHKSAVSTLAVC-NG-VLY-SGSRDGT--IRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHE-SG--SI 448 (552)
Q Consensus 377 ~~~~h~~~v~~l~~~-~~-~l~-s~~~dg~--i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~-dg--~i 448 (552)
.+..|...+.+++|+ ++ .|+ +++.|+. |++||+.+++. ..+..+ ...... ++|+|+|+.|++++. ++ .|
T Consensus 217 ~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~-~~l~~~-~~~~~~-~~~spdg~~l~~~s~~~g~~~i 293 (415)
T 2hqs_A 217 QVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQI-RQVTDG-RSNNTE-PTWFPDSQNLAFTSDQAGRPQV 293 (415)
T ss_dssp EEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE-EECCCC-SSCEEE-EEECTTSSEEEEEECTTSSCEE
T ss_pred EeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCE-EeCcCC-CCcccc-eEECCCCCEEEEEECCCCCcEE
Confidence 566788899999999 44 566 6666665 99999998876 344433 334444 699999999998876 45 67
Q ss_pred EEEeCCc-ceeeeecccceEEEEEe--cCCEEEEEeCC---CeEEEEecCCCeeeeeeccCCCcccCcceEEEEEeCC--
Q 008820 449 KVWRNDK-FMKSMQTHKGSVFAVFL--EGKWLFTGGWD---KTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQG-- 520 (552)
Q Consensus 449 ~iwd~~~-~~~~~~~h~~~v~~v~~--~~~~l~sgs~d---g~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~-- 520 (552)
++||... ....+..|...+.++.| +|++|++++.+ ..|++||+.+++.... .. ...+.+++|+|+
T Consensus 294 ~~~d~~~~~~~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~~l-~~------~~~~~~~~~spdg~ 366 (415)
T 2hqs_A 294 YKVNINGGAPQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVL-SS------TFLDETPSLAPNGT 366 (415)
T ss_dssp EEEETTSSCCEECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEEEC-CC------SSSCEEEEECTTSS
T ss_pred EEEECCCCCEEEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEEEe-cC------CCCcCCeEEcCCCC
Confidence 7778653 34455567777777665 89999988764 5899999998766432 11 126889999953
Q ss_pred eEEEEeCCC---eEEEEEecCCcceeEEEeccc
Q 008820 521 KLFVGCADR---TVKIALCNRQIPEIFSLLLHI 550 (552)
Q Consensus 521 ~l~s~s~Dg---~v~iw~~~~~~~~~~~~~gh~ 550 (552)
.|++++.|+ .|++|+++ +.....+.+|.
T Consensus 367 ~l~~~s~~~~~~~l~~~d~~--g~~~~~l~~~~ 397 (415)
T 2hqs_A 367 MVIYSSSQGMGSVLNLVSTD--GRFKARLPATD 397 (415)
T ss_dssp EEEEEEEETTEEEEEEEETT--SCCEEECCCSS
T ss_pred EEEEEEcCCCccEEEEEECC--CCcEEEeeCCC
Confidence 377777766 78888876 44556666664
No 129
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.86 E-value=1.5e-19 Score=176.34 Aligned_cols=272 Identities=10% Similarity=0.018 Sum_probs=194.7
Q ss_pred CEEEEEeCCCcEEEEeCCCCeEEEEEeCCCC--CeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCccccccccCCCc
Q 008820 263 GFLFSSSFDKSIHVWSLKDFSHVHTFKGHDH--KVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDW 340 (552)
Q Consensus 263 ~~l~s~s~dg~I~iwd~~~~~~~~~~~~h~~--~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~ 340 (552)
+++++++.+++|++||..+++.+..+..... .+..++|+|++..+++++..++.|.+||+.+++....+.........
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~ 81 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERV 81 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEE
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCccccc
Confidence 5789999999999999999999888874332 57899999998878888888999999999876543332211100000
Q ss_pred eeeeEEEEeeCCCEEEEee------------CCCcEEEEECCCCceeEEecCCCCCeEEEEEe-CC-EEEEEeCCCcEEE
Q 008820 341 RYSGIHALTTSGRYLYTGS------------GDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC-NG-VLYSGSRDGTIRL 406 (552)
Q Consensus 341 ~~~~~~~~~~~~~~l~sgs------------~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~-~~-~l~s~~~dg~i~i 406 (552)
......+++++++++++++ .++.|.+||+.+++.+..+.. ...+.+++|+ ++ +++++ ++.|++
T Consensus 82 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~--~~~i~~ 158 (337)
T 1pby_B 82 KSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA-PRQITMLAWARDGSKLYGL--GRDLHV 158 (337)
T ss_dssp ECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-CSSCCCEEECTTSSCEEEE--SSSEEE
T ss_pred ccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC-CCCcceeEECCCCCEEEEe--CCeEEE
Confidence 0112357889999888886 579999999999988887764 4567888998 43 56666 789999
Q ss_pred EECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEECCC------------------------cEEEEeCCcc---eee
Q 008820 407 WSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESG------------------------SIKVWRNDKF---MKS 459 (552)
Q Consensus 407 wd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg------------------------~i~iwd~~~~---~~~ 459 (552)
||+.+++....+....... . ..++|+++.++..+.++ .|.+||.... ...
T Consensus 159 ~d~~~~~~~~~~~~~~~~~--~-~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~ 235 (337)
T 1pby_B 159 MDPEAGTLVEDKPIQSWEA--E-TYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMRE 235 (337)
T ss_dssp EETTTTEEEEEECSTTTTT--T-TBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEE
T ss_pred EECCCCcEeeeeeccccCC--C-ceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEee
Confidence 9999998887776543111 1 26788888766554332 4678886542 122
Q ss_pred eecccceEEEEEe--cCCEEEEEeCCCeEEEEecCCCeeeeeeccCCCcccCcceEEEEEeC--CeEEEEeCCCeEEEEE
Q 008820 460 MQTHKGSVFAVFL--EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQ--GKLFVGCADRTVKIAL 535 (552)
Q Consensus 460 ~~~h~~~v~~v~~--~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~~--~~l~s~s~Dg~v~iw~ 535 (552)
+..+...+.++.+ ++++++++ ++.|++||+.+++....... ...+.+++|++ ..+++++.|+.|++||
T Consensus 236 ~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~------~~~~~~~~~s~dg~~l~~~~~~~~i~v~d 307 (337)
T 1pby_B 236 VRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVPL------PHSYYSVNVSTDGSTVWLGGALGDLAAYD 307 (337)
T ss_dssp EEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEEC------SSCCCEEEECTTSCEEEEESBSSEEEEEE
T ss_pred cCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCCcCcceecC------CCceeeEEECCCCCEEEEEcCCCcEEEEE
Confidence 3445556656655 89999888 79999999998876655443 23467889985 3488888999999999
Q ss_pred ecCCcceeEEEecc
Q 008820 536 CNRQIPEIFSLLLH 549 (552)
Q Consensus 536 ~~~~~~~~~~~~gh 549 (552)
+. +...+..+..+
T Consensus 308 ~~-~~~~~~~~~~~ 320 (337)
T 1pby_B 308 AE-TLEKKGQVDLP 320 (337)
T ss_dssp TT-TCCEEEEEECG
T ss_pred Cc-CCcEEEEEEcC
Confidence 97 45555555443
No 130
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.86 E-value=1.3e-19 Score=188.33 Aligned_cols=261 Identities=11% Similarity=0.031 Sum_probs=190.2
Q ss_pred CCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeC--CCCCCCccccccccCCC
Q 008820 262 GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSF--SFPLGHEPLKKWNEEKD 339 (552)
Q Consensus 262 ~~~l~s~s~dg~I~iwd~~~~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~--~~~~~~~~~~~~~~~~~ 339 (552)
+..+++++.|++|.+||..+++++.++..+.. +..++|+|++. ++++++.|++|++||+ .+.+. +..+....
T Consensus 149 ~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~-~~~v~~spdg~-~l~v~~~d~~V~v~D~~~~t~~~---~~~i~~g~- 222 (543)
T 1nir_A 149 NLFSVTLRDAGQIALVDGDSKKIVKVIDTGYA-VHISRMSASGR-YLLVIGRDARIDMIDLWAKEPTK---VAEIKIGI- 222 (543)
T ss_dssp GEEEEEEGGGTEEEEEETTTCCEEEEEECSTT-EEEEEECTTSC-EEEEEETTSEEEEEETTSSSCEE---EEEEECCS-
T ss_pred CEEEEEEcCCCeEEEEECCCceEEEEEecCcc-cceEEECCCCC-EEEEECCCCeEEEEECcCCCCcE---EEEEecCC-
Confidence 77888999999999999999999999984433 89999999766 6678888899999999 54432 22222211
Q ss_pred ceeeeEEEEee----CCCEEEEee-CCCcEEEEECCCCceeEEecCC-----------CCCeEEEEEe-CC--EEEEEeC
Q 008820 340 WRYSGIHALTT----SGRYLYTGS-GDRTIKAWSLLDGTLSCTMSGH-----------KSAVSTLAVC-NG--VLYSGSR 400 (552)
Q Consensus 340 ~~~~~~~~~~~----~~~~l~sgs-~dg~i~iwd~~~~~~~~~~~~h-----------~~~v~~l~~~-~~--~l~s~~~ 400 (552)
. ..-.+++| +++++++++ .+++|.+||..+++++..+..+ ...+.++.++ ++ ++++...
T Consensus 223 -~-p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~ 300 (543)
T 1nir_A 223 -E-ARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKE 300 (543)
T ss_dssp -E-EEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETT
T ss_pred -C-cceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECC
Confidence 1 23457899 999988887 4899999999999999887642 2368899998 23 7778888
Q ss_pred CCcEEEEECCCCceeE--EEecCCCCceEEEEEEcCCCCEEEEEE-CCCcEEEEeCC--cceeeeec----ccceEEEE-
Q 008820 401 DGTIRLWSLSDHSLLT--VLEEDSSGAVSSVLSLTAVQHTLVVSH-ESGSIKVWRND--KFMKSMQT----HKGSVFAV- 470 (552)
Q Consensus 401 dg~i~iwd~~~~~~~~--~~~~~~~~~~~~~~~~s~~~~~l~~g~-~dg~i~iwd~~--~~~~~~~~----h~~~v~~v- 470 (552)
+++|.+||+.+.+.+. .+.. ...... +.|+|+++++++++ .+++|.+||.. ++...+.. |.+....+
T Consensus 301 ~g~i~vvd~~~~~~l~~~~i~~--~~~~~~-~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~~ 377 (543)
T 1nir_A 301 TGKVLLVNYKDIDNLTVTSIGA--APFLHD-GGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANFV 377 (543)
T ss_dssp TTEEEEEECTTSSSCEEEEEEC--CSSCCC-EEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEEE
T ss_pred CCeEEEEEecCCCcceeEEecc--CcCccC-ceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCcccC
Confidence 9999999998876554 3332 223333 68999999877655 58899999965 45555553 55433333
Q ss_pred Eec-CCEEEEEe-CCCeEEEEecCC-------CeeeeeeccCCCcccCcceEEEEEeCC--eEEEEe-------CCCeEE
Q 008820 471 FLE-GKWLFTGG-WDKTVSVQELAG-------DEFEEDVIPTGAIPCGSVITALLYWQG--KLFVGC-------ADRTVK 532 (552)
Q Consensus 471 ~~~-~~~l~sgs-~dg~i~iwd~~~-------~~~~~~~~~~~~~~~~~~v~~l~~~~~--~l~s~s-------~Dg~v~ 532 (552)
.++ +..++++. .|++|.+||+.+ .+....+... ...+..+.++|+ .|++++ .+++|.
T Consensus 378 ~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~-----g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~ 452 (543)
T 1nir_A 378 HPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQ-----GGGSLFIKTHPKSSHLYVDTTFNPDARISQSVA 452 (543)
T ss_dssp ETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECS-----CSCCCCEECCTTCCEEEECCTTCSSHHHHTCEE
T ss_pred CCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcC-----CCCceEEEcCCCCCcEEEecCCCCCcccCceEE
Confidence 445 66667765 589999999987 5555554432 334667888864 477776 278999
Q ss_pred EEEecC
Q 008820 533 IALCNR 538 (552)
Q Consensus 533 iw~~~~ 538 (552)
+||++.
T Consensus 453 v~d~~~ 458 (543)
T 1nir_A 453 VFDLKN 458 (543)
T ss_dssp EEETTC
T ss_pred EEECCC
Confidence 999983
No 131
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.85 E-value=2e-19 Score=181.03 Aligned_cols=256 Identities=7% Similarity=-0.016 Sum_probs=182.5
Q ss_pred EEeecCccceEEEEEc----------------CCEEEEEeCC------CcEEEEeCCCCeEEEEEeCCCCCeEEEEEecC
Q 008820 246 KDLQGHRDCVTGLAVG----------------GGFLFSSSFD------KSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDE 303 (552)
Q Consensus 246 ~~l~~H~~~V~~l~~s----------------~~~l~s~s~d------g~I~iwd~~~~~~~~~~~~h~~~v~~v~~~~~ 303 (552)
..+.+|...+..++++ +..++.++.+ ++|++||++. .....+.+|...+.+++|+|+
T Consensus 111 ~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~~l~~~s~~~~~~~~~~i~i~d~~g-~~~~~l~~~~~~v~~~~~Spd 189 (415)
T 2hqs_A 111 NSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTNGGQFPYELRVSDYDG-YNQFVVHRSPQPLMSPAWSPD 189 (415)
T ss_dssp EEEEECGGGHHHHHHHHHHHHHHHHHSSCCCTTCEEEEEEECSSSSCCEEEEEEETTS-CSCEEEEEESSCEEEEEECTT
T ss_pred eEEEcChhHHHHHHHHHHHHHHHHHcCCCCcCCCEEEEEEecCCCCccceEEEEcCCC-CCCEEEeCCCCcceeeEEcCC
Confidence 3466777777666554 5677777664 7999999974 556778889999999999998
Q ss_pred CCCEEEEEcCCC---cEEEEeCCCCCCCccccccccCCCceeeeEEEEeeCCCEEE-EeeCCCc--EEEEECCCCceeEE
Q 008820 304 DQPLCISGDSGG---GIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLY-TGSGDRT--IKAWSLLDGTLSCT 377 (552)
Q Consensus 304 ~~~~l~s~~~dg---~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-sgs~dg~--i~iwd~~~~~~~~~ 377 (552)
+. .+++++.++ .|++||+.+++... ...+.. .....+|+|+++.|+ +++.|+. |++||+.+++. ..
T Consensus 190 g~-~la~~s~~~~~~~i~~~d~~tg~~~~----l~~~~~--~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~-~~ 261 (415)
T 2hqs_A 190 GS-KLAYVTFESGRSALVIQTLANGAVRQ----VASFPR--HNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQI-RQ 261 (415)
T ss_dssp SS-EEEEEECTTSSCEEEEEETTTCCEEE----EECCSS--CEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE-EE
T ss_pred CC-EEEEEEecCCCcEEEEEECCCCcEEE----eecCCC--cccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCE-Ee
Confidence 77 556666664 99999998764321 111211 223458899999777 6666665 99999988876 56
Q ss_pred ecCCCCCeEEEEEe-CC-EEEEEeC-CC--cEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEECC---CcEE
Q 008820 378 MSGHKSAVSTLAVC-NG-VLYSGSR-DG--TIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHES---GSIK 449 (552)
Q Consensus 378 ~~~h~~~v~~l~~~-~~-~l~s~~~-dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~d---g~i~ 449 (552)
+..|...+.+++|+ ++ .|++++. ++ .|.+||+.+++.. .+..+ ... ...++|+|+|++|++++.+ ..|+
T Consensus 262 l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~-~l~~~-~~~-~~~~~~spdG~~l~~~~~~~g~~~i~ 338 (415)
T 2hqs_A 262 VTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQ-RITWE-GSQ-NQDADVSSDGKFMVMVSSNGGQQHIA 338 (415)
T ss_dssp CCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCE-ECCCS-SSE-EEEEEECTTSSEEEEEEECSSCEEEE
T ss_pred CcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCEE-EEecC-CCc-ccCeEECCCCCEEEEEECcCCceEEE
Confidence 77788899999999 44 7777775 45 6888899887643 33322 223 3346999999999988764 5899
Q ss_pred EEeCCc-ceeeeecccceEEEEEe--cCCEEEEEeCCC---eEEEEecCCCeeeeeeccCCCcccCcceEEEEEeCC
Q 008820 450 VWRNDK-FMKSMQTHKGSVFAVFL--EGKWLFTGGWDK---TVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQG 520 (552)
Q Consensus 450 iwd~~~-~~~~~~~h~~~v~~v~~--~~~~l~sgs~dg---~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~ 520 (552)
+||... ....+..|. .+.++.| +|++|++++.++ .|++||+.++..... .. +...|.+++|+|.
T Consensus 339 ~~d~~~~~~~~l~~~~-~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g~~~~~l-~~-----~~~~v~~~~~~~~ 408 (415)
T 2hqs_A 339 KQDLATGGVQVLSSTF-LDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARL-PA-----TDGQVKFPAWSPY 408 (415)
T ss_dssp EEETTTCCEEECCCSS-SCEEEEECTTSSEEEEEEEETTEEEEEEEETTSCCEEEC-CC-----SSSEEEEEEECCC
T ss_pred EEECCCCCEEEecCCC-CcCCeEEcCCCCEEEEEEcCCCccEEEEEECCCCcEEEe-eC-----CCCCCcCCccccc
Confidence 999754 334455554 6666665 899999988877 799999986644332 22 2567999999974
No 132
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.84 E-value=8e-18 Score=165.33 Aligned_cols=270 Identities=10% Similarity=0.044 Sum_probs=196.6
Q ss_pred ccceEEEEEc--CCEEEEEeC-------CCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeC
Q 008820 252 RDCVTGLAVG--GGFLFSSSF-------DKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSF 322 (552)
Q Consensus 252 ~~~V~~l~~s--~~~l~s~s~-------dg~I~iwd~~~~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~ 322 (552)
...+..++|+ ++++++++. ++.|.+||..+++.+..+... ..+..++|+|+++.++++...++.|.+||.
T Consensus 40 ~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~ 118 (353)
T 3vgz_A 40 GKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHND-LKPFGATINNTTQTLWFGNTVNSAVTAIDA 118 (353)
T ss_dssp ESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEES-SCCCSEEEETTTTEEEEEETTTTEEEEEET
T ss_pred ccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecC-CCcceEEECCCCCEEEEEecCCCEEEEEeC
Confidence 3567789998 778887774 568999999999998888753 447889999998878888888999999999
Q ss_pred CCCCCCccccccccCC----CceeeeEEEEeeCCCEEEEee--CCCcEEEEECCCCceeEEecCCCCCeEEEEEe--CCE
Q 008820 323 SFPLGHEPLKKWNEEK----DWRYSGIHALTTSGRYLYTGS--GDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC--NGV 394 (552)
Q Consensus 323 ~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~sgs--~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~ 394 (552)
.+++....+....... .........++++++.+++++ .++.|.+||..+++.+..+..+...+.+++|+ ++.
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~ 198 (353)
T 3vgz_A 119 KTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKR 198 (353)
T ss_dssp TTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTTTE
T ss_pred CCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECCCCCE
Confidence 8765433332211110 000122357889999777665 47899999999999998888666678899999 348
Q ss_pred EEEEeCCCcEEEEECCCCceeEEEecCCC--CceEEEEEEcCCCCEEEEEEC-CCcEEEEeCC--cceeeeecccceEEE
Q 008820 395 LYSGSRDGTIRLWSLSDHSLLTVLEEDSS--GAVSSVLSLTAVQHTLVVSHE-SGSIKVWRND--KFMKSMQTHKGSVFA 469 (552)
Q Consensus 395 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~--~~~~~~~~~s~~~~~l~~g~~-dg~i~iwd~~--~~~~~~~~h~~~v~~ 469 (552)
+++++.++.|.+||+.+++....+..... ......++++|+++.+++++. ++.|.+||.. +....+......-..
T Consensus 199 l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~ 278 (353)
T 3vgz_A 199 LYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPESLAVL 278 (353)
T ss_dssp EEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECSSCCCEE
T ss_pred EEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCceEE
Confidence 89999999999999999998887765222 222333689999998777765 4999999965 344455444433345
Q ss_pred EEecCCEEEEEe-CCCeEEEEecCCCeeeeeeccCCCcccCcceEEEEEeC-C-eEEEEeCC
Q 008820 470 VFLEGKWLFTGG-WDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQ-G-KLFVGCAD 528 (552)
Q Consensus 470 v~~~~~~l~sgs-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~~-~-~l~s~s~D 528 (552)
+++++++++.++ .++.|.+||..+++....... ...+.+++|++ + .++++..+
T Consensus 279 ~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~------~~~~~~~~~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 279 FNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDT------PTHPNSLALSADGKTLYVSVKQ 334 (353)
T ss_dssp EETTTTEEEEEETTTTEEEEEETTTTEEEEEEEC------CSEEEEEEECTTSCEEEEEEEC
T ss_pred ECCCCCEEEEEECCCCeEEEEECCCCeEEEEEec------CCCCCeEEEcCCCCEEEEEEcc
Confidence 566888666555 689999999998877665443 33578899984 3 36665554
No 133
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.84 E-value=5.7e-18 Score=165.00 Aligned_cols=268 Identities=10% Similarity=0.058 Sum_probs=181.7
Q ss_pred CCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCC-CccccccccCCCc
Q 008820 262 GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLG-HEPLKKWNEEKDW 340 (552)
Q Consensus 262 ~~~l~s~s~dg~I~iwd~~~~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~-~~~~~~~~~~~~~ 340 (552)
+..+++++.++.|++||..+++....+..+...+ .++|+|++..+++++..++.|.+||..++.. ...+. ....
T Consensus 10 ~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~---~~~~- 84 (331)
T 3u4y_A 10 NFGIVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQ---EGQS- 84 (331)
T ss_dssp CEEEEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEE---ECSS-
T ss_pred CEEEEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecc---cCCC-
Confidence 4568888899999999999999988888777777 9999998887777777799999999987654 22221 1111
Q ss_pred eeeeEEEEeeCCCEEEEeeCCC---cEEEEECCCCceeEEecCCCCCeEEEEEe-CC--EEEEEeCCCc-EEEEECCCCc
Q 008820 341 RYSGIHALTTSGRYLYTGSGDR---TIKAWSLLDGTLSCTMSGHKSAVSTLAVC-NG--VLYSGSRDGT-IRLWSLSDHS 413 (552)
Q Consensus 341 ~~~~~~~~~~~~~~l~sgs~dg---~i~iwd~~~~~~~~~~~~h~~~v~~l~~~-~~--~l~s~~~dg~-i~iwd~~~~~ 413 (552)
.....++++++++++++..++ .|.+||+.+++.+..+..+ ....+++|+ ++ ++++...++. |.+|++....
T Consensus 85 -~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g 162 (331)
T 3u4y_A 85 -SMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIP-YDAVGIAISPNGNGLILIDRSSANTVRRFKIDADG 162 (331)
T ss_dssp -CCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECC-TTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTC
T ss_pred -CccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECC-CCccceEECCCCCEEEEEecCCCceEEEEEECCCC
Confidence 112147899999888666553 8999999999988887754 456899999 43 4455566688 9999997644
Q ss_pred eeEEE---ecCCCCceEEEEEEcCCCCEEEEEE-CCCcEEEEeCC--cc---eeeeecccceEEEE--EecCCEEEEEe-
Q 008820 414 LLTVL---EEDSSGAVSSVLSLTAVQHTLVVSH-ESGSIKVWRND--KF---MKSMQTHKGSVFAV--FLEGKWLFTGG- 481 (552)
Q Consensus 414 ~~~~~---~~~~~~~~~~~~~~s~~~~~l~~g~-~dg~i~iwd~~--~~---~~~~~~h~~~v~~v--~~~~~~l~sgs- 481 (552)
.+... ....... ...++++|+++++++++ .++.|++||.. +. +..+..+ ..+..+ +++|++++.++
T Consensus 163 ~~~~~~~~~~~~~~~-~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~-~~~~~~~~spdg~~l~v~~~ 240 (331)
T 3u4y_A 163 VLFDTGQEFISGGTR-PFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGTN-NLPGTIVVSRDGSTVYVLTE 240 (331)
T ss_dssp CEEEEEEEEECSSSS-EEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECS-SCCCCEEECTTSSEEEEECS
T ss_pred cEeecCCccccCCCC-ccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccCC-CCCceEEECCCCCEEEEEEc
Confidence 33111 1111122 34479999999665555 68899999965 34 4445433 333444 45899776655
Q ss_pred CCCeEEEEecCCCeeee--eeccC--CCcccCcceEEEEEeCC--eEEEE-eCCCeEEEEEecC
Q 008820 482 WDKTVSVQELAGDEFEE--DVIPT--GAIPCGSVITALLYWQG--KLFVG-CADRTVKIALCNR 538 (552)
Q Consensus 482 ~dg~i~iwd~~~~~~~~--~~~~~--~~~~~~~~v~~l~~~~~--~l~s~-s~Dg~v~iw~~~~ 538 (552)
.++.|.+||+.+++... ..... ...........++|+++ .|+++ ..++.|.+|++..
T Consensus 241 ~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~ 304 (331)
T 3u4y_A 241 STVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTISG 304 (331)
T ss_dssp SEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTS
T ss_pred CCCEEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEecC
Confidence 57889999999877622 21111 00011112356888853 36554 4567999999974
No 134
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.83 E-value=6.9e-18 Score=164.94 Aligned_cols=265 Identities=11% Similarity=0.173 Sum_probs=170.8
Q ss_pred EEEEEeCCCcEEEEeCC-CC--eEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCC--CCCCCccccccccCC
Q 008820 264 FLFSSSFDKSIHVWSLK-DF--SHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFS--FPLGHEPLKKWNEEK 338 (552)
Q Consensus 264 ~l~s~s~dg~I~iwd~~-~~--~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~--~~~~~~~~~~~~~~~ 338 (552)
.+++++.|+.|++||+. ++ +.+..+ .|...+.+++|+|++..+++++..++.|.+|+++ ++. ...+.......
T Consensus 7 l~~~~~~~~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~-~~~~~~~~~~~ 84 (343)
T 1ri6_A 7 VYIASPESQQIHVWNLNHEGALTLTQVV-DVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGA-LTFAAESALPG 84 (343)
T ss_dssp EEEEEGGGTEEEEEEECTTSCEEEEEEE-ECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCC-EEEEEEEECSS
T ss_pred EEEeCCCCCeEEEEEECCCCcEEEeeeE-ecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCc-eeeccccccCC
Confidence 34455789999999985 33 334443 4777899999999877555555555999999997 322 12222222111
Q ss_pred CceeeeEEEEeeCCCEEEEeeC-CCcEEEEECC---CCceeEEecCCCCCeEEEEEe-CC-EEEEEe-CCCcEEEEECCC
Q 008820 339 DWRYSGIHALTTSGRYLYTGSG-DRTIKAWSLL---DGTLSCTMSGHKSAVSTLAVC-NG-VLYSGS-RDGTIRLWSLSD 411 (552)
Q Consensus 339 ~~~~~~~~~~~~~~~~l~sgs~-dg~i~iwd~~---~~~~~~~~~~h~~~v~~l~~~-~~-~l~s~~-~dg~i~iwd~~~ 411 (552)
.....+++++++++++++. ++.|.+||+. +.+....+..+ ..+.+++|+ ++ .+++++ .++.|++||+.+
T Consensus 85 ---~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~ 160 (343)
T 1ri6_A 85 ---SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGL-DGCHSANISPDNRTLWVPALKQDRICLFTVSD 160 (343)
T ss_dssp ---CCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCC-TTBCCCEECTTSSEEEEEEGGGTEEEEEEECT
T ss_pred ---CCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccCC-CCceEEEECCCCCEEEEecCCCCEEEEEEecC
Confidence 1234578999997766654 8899999994 44455555544 458899999 33 677776 899999999987
Q ss_pred -CceeE----EEecCCCCceEEEEEEcCCCCEEEEEE-CCCcEEEEeCCc----c--eeeee----cc--cceEEEEEe-
Q 008820 412 -HSLLT----VLEEDSSGAVSSVLSLTAVQHTLVVSH-ESGSIKVWRNDK----F--MKSMQ----TH--KGSVFAVFL- 472 (552)
Q Consensus 412 -~~~~~----~~~~~~~~~~~~~~~~s~~~~~l~~g~-~dg~i~iwd~~~----~--~~~~~----~h--~~~v~~v~~- 472 (552)
++... .+.......... ++++|+++++++++ .++.|.+||... . ..... ++ ...+..+.+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~-~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s 239 (343)
T 1ri6_A 161 DGHLVAQDPAEVTTVEGAGPRH-MVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHIT 239 (343)
T ss_dssp TSCEEEEEEEEEECSTTCCEEE-EEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEEC
T ss_pred CCceeeecccccccCCCCCcce-EEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEEC
Confidence 65432 233332223333 78999999776655 789999999742 1 12222 11 223445555
Q ss_pred -cCCEEEE-EeCCCeEEEEecC--CCeeeeeeccCCCcccCcceEEEEEeC-C-eEEEEe-CCCeEEEEEecCC
Q 008820 473 -EGKWLFT-GGWDKTVSVQELA--GDEFEEDVIPTGAIPCGSVITALLYWQ-G-KLFVGC-ADRTVKIALCNRQ 539 (552)
Q Consensus 473 -~~~~l~s-gs~dg~i~iwd~~--~~~~~~~~~~~~~~~~~~~v~~l~~~~-~-~l~s~s-~Dg~v~iw~~~~~ 539 (552)
++++|++ +..++.|++||+. ++......... ....+..++|++ + .|++++ .|+.|.+|+++..
T Consensus 240 ~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~----~~~~~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~ 309 (343)
T 1ri6_A 240 PDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQP----TETQPRGFNVDHSGKYLIAAGQKSHHISVYEIVGE 309 (343)
T ss_dssp TTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEE----CSSSCCCEEECTTSSEEEEECTTTCEEEEEEEETT
T ss_pred CCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeec----CCCccceEEECCCCCEEEEecCCCCeEEEEEEcCC
Confidence 7887774 4578999999998 33222211111 122377889985 3 477776 6899999988743
No 135
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.81 E-value=4.4e-18 Score=184.82 Aligned_cols=279 Identities=8% Similarity=0.013 Sum_probs=189.0
Q ss_pred ccceEEEEEc--CCEEEEEeC-CC-----cEEEEeCCCCeEEEEEeCCCC------------------------CeEEEE
Q 008820 252 RDCVTGLAVG--GGFLFSSSF-DK-----SIHVWSLKDFSHVHTFKGHDH------------------------KVMAVV 299 (552)
Q Consensus 252 ~~~V~~l~~s--~~~l~s~s~-dg-----~I~iwd~~~~~~~~~~~~h~~------------------------~v~~v~ 299 (552)
...|.+++|+ |++|++++. |+ +|++||+.+++....+..+.. .+.+++
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 115 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQ 115 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCE
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeE
Confidence 4568999999 899999998 88 899999999988777765433 378999
Q ss_pred EecCCCCEEEEEcCCCcEEEEeCCCCC--CCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCceeEE
Q 008820 300 YVDEDQPLCISGDSGGGIFVWSFSFPL--GHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCT 377 (552)
Q Consensus 300 ~~~~~~~~l~s~~~dg~i~vwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~ 377 (552)
|+|++..+ ++++. +.|++||+.++. ....+ ..+.. .....+++|+|++|++++. +.|++||+.+++....
T Consensus 116 ~SpDg~~l-~~~~~-~~i~~~d~~~~~~~~~~~l---~~~~~--~~~~~~~SPDG~~la~~~~-~~i~~~d~~~g~~~~~ 187 (741)
T 2ecf_A 116 WSPDAQRL-LFPLG-GELYLYDLKQEGKAAVRQL---THGEG--FATDAKLSPKGGFVSFIRG-RNLWVIDLASGRQMQL 187 (741)
T ss_dssp ECTTSSEE-EEEET-TEEEEEESSSCSTTSCCBC---CCSSS--CEEEEEECTTSSEEEEEET-TEEEEEETTTTEEEEC
T ss_pred ECCCCCEE-EEEeC-CcEEEEECCCCCcceEEEc---ccCCc--ccccccCCCCCCEEEEEeC-CcEEEEecCCCCEEEe
Confidence 99988755 44444 999999998762 11122 12211 1234589999999998875 6899999998877655
Q ss_pred ecCCCCC----------------eEEEEEe-CC-EEEEEeCCC---------------------------------cEEE
Q 008820 378 MSGHKSA----------------VSTLAVC-NG-VLYSGSRDG---------------------------------TIRL 406 (552)
Q Consensus 378 ~~~h~~~----------------v~~l~~~-~~-~l~s~~~dg---------------------------------~i~i 406 (552)
...+... +.+++|+ ++ .|++++.|+ .|++
T Consensus 188 ~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~ 267 (741)
T 2ecf_A 188 TADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGV 267 (741)
T ss_dssp CCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEE
T ss_pred ccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEE
Confidence 5444432 4779999 44 788887665 8899
Q ss_pred EECCC-CceeEEEec-CCCCceEEEEEEcCCCCEEEEEEC-----CCcEEEEeCCc--ceeeeecccc----eEEE--EE
Q 008820 407 WSLSD-HSLLTVLEE-DSSGAVSSVLSLTAVQHTLVVSHE-----SGSIKVWRNDK--FMKSMQTHKG----SVFA--VF 471 (552)
Q Consensus 407 wd~~~-~~~~~~~~~-~~~~~~~~~~~~s~~~~~l~~g~~-----dg~i~iwd~~~--~~~~~~~h~~----~v~~--v~ 471 (552)
||+.+ ++....... .+...+. .++| |||+.|++++. +..|++||..+ ....+..+.. .+.. ++
T Consensus 268 ~d~~~~~~~~~~~~~~~~~~~~~-~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~s 345 (741)
T 2ecf_A 268 ISPAEQAQTQWIDLGKEQDIYLA-RVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFL 345 (741)
T ss_dssp ECSSTTCCCEEECCCSCSSEEEE-EEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEEC
T ss_pred EECCCCCceEEecCCCCcceEEE-EEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEEC
Confidence 99988 776544322 1223333 3689 99999997764 56799999653 3444444432 2223 44
Q ss_pred ecCCEEEEEeCCCeEEEEecC-CCeeeeeeccCCCcccCcceEEE-EEeC-C-eEE-EEeCCC--eEEEEEecCCcceeE
Q 008820 472 LEGKWLFTGGWDKTVSVQELA-GDEFEEDVIPTGAIPCGSVITAL-LYWQ-G-KLF-VGCADR--TVKIALCNRQIPEIF 544 (552)
Q Consensus 472 ~~~~~l~sgs~dg~i~iwd~~-~~~~~~~~~~~~~~~~~~~v~~l-~~~~-~-~l~-s~s~Dg--~v~iw~~~~~~~~~~ 544 (552)
+||+++++++.||.+++|.+. ++. ...+... ...+..+ .|++ + .++ +++.|+ .++||+++..+....
T Consensus 346 pdg~~~~~~~~~g~~~l~~~~~~~~-~~~l~~~-----~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~g~~~~ 419 (741)
T 2ecf_A 346 DDGSILWSSERTGFQHLYRIDSKGK-AAALTHG-----NWSVDELLAVDEKAGLAYFRAGIESARESQIYAVPLQGGQPQ 419 (741)
T ss_dssp TTSCEEEEECTTSSCEEEEECSSSC-EEESCCS-----SSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEETTCCCCE
T ss_pred CCCeEEEEecCCCccEEEEEcCCCC-eeeeeec-----ceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEEcCCCCee
Confidence 589999999999988888765 233 2222221 4456666 5885 3 354 555565 899999975444333
Q ss_pred EE
Q 008820 545 SL 546 (552)
Q Consensus 545 ~~ 546 (552)
.+
T Consensus 420 ~l 421 (741)
T 2ecf_A 420 RL 421 (741)
T ss_dssp EC
T ss_pred ec
Confidence 33
No 136
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.81 E-value=6.4e-17 Score=158.01 Aligned_cols=243 Identities=13% Similarity=0.156 Sum_probs=163.3
Q ss_pred ecCccceEEEEEc--CCEEEEEeCC-CcEEEEeCC--CCe--EEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEe
Q 008820 249 QGHRDCVTGLAVG--GGFLFSSSFD-KSIHVWSLK--DFS--HVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWS 321 (552)
Q Consensus 249 ~~H~~~V~~l~~s--~~~l~s~s~d-g~I~iwd~~--~~~--~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd 321 (552)
..|...+.+++|+ +++|++++.+ +.|++|++. +++ .+..+..+. .+..++|+|++..+++++..++.|.+||
T Consensus 34 ~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~i~~~d 112 (343)
T 1ri6_A 34 VDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG-SLTHISTDHQGQFVFVGSYNAGNVSVTR 112 (343)
T ss_dssp EECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS-CCSEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred EecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCC-CCcEEEEcCCCCEEEEEecCCCeEEEEE
Confidence 3577788899998 8888888876 999999997 554 445555544 7899999998887767777799999999
Q ss_pred CCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEee-CCCcEEEEECCC-CceeE----EecC-CCCCeEEEEEe-CC
Q 008820 322 FSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGS-GDRTIKAWSLLD-GTLSC----TMSG-HKSAVSTLAVC-NG 393 (552)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs-~dg~i~iwd~~~-~~~~~----~~~~-h~~~v~~l~~~-~~ 393 (552)
+..+.............. ....+++++++.+++++ .++.|++||+.+ ++... .+.. ....+.+++|+ ++
T Consensus 113 ~~~~~~~~~~~~~~~~~~---~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg 189 (343)
T 1ri6_A 113 LEDGLPVGVVDVVEGLDG---CHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNE 189 (343)
T ss_dssp EETTEEEEEEEEECCCTT---BCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTS
T ss_pred CCCCccccccccccCCCC---ceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCC
Confidence 952222222222222111 12347899999887777 899999999987 65432 2222 34578899999 33
Q ss_pred -EEEE-EeCCCcEEEEECCC--Cce--eEEEecCCC----CceEEEEEEcCCCCEEEEEE-CCCcEEEEeCC----c--c
Q 008820 394 -VLYS-GSRDGTIRLWSLSD--HSL--LTVLEEDSS----GAVSSVLSLTAVQHTLVVSH-ESGSIKVWRND----K--F 456 (552)
Q Consensus 394 -~l~s-~~~dg~i~iwd~~~--~~~--~~~~~~~~~----~~~~~~~~~s~~~~~l~~g~-~dg~i~iwd~~----~--~ 456 (552)
++++ +..++.|++||+.. ++. ...+..... ......++|+|++++++++. .++.|.+||.. + .
T Consensus 190 ~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~ 269 (343)
T 1ri6_A 190 QYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSK 269 (343)
T ss_dssp SEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEE
T ss_pred CEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEE
Confidence 5554 45899999999953 433 223321111 11222378999998887554 78999999975 1 2
Q ss_pred eeeeecccceEEEEEe--cCCEEEEEe-CCCeEEEEec--CCCee
Q 008820 457 MKSMQTHKGSVFAVFL--EGKWLFTGG-WDKTVSVQEL--AGDEF 496 (552)
Q Consensus 457 ~~~~~~h~~~v~~v~~--~~~~l~sgs-~dg~i~iwd~--~~~~~ 496 (552)
+..+..+.. +.++.+ ++++|++++ .++.|.+|++ .++++
T Consensus 270 ~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~g~~ 313 (343)
T 1ri6_A 270 EGFQPTETQ-PRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLL 313 (343)
T ss_dssp EEEEECSSS-CCCEEECTTSSEEEEECTTTCEEEEEEEETTTTEE
T ss_pred eeeecCCCc-cceEEECCCCCEEEEecCCCCeEEEEEEcCCCcee
Confidence 233333333 555555 899888887 6899999955 45543
No 137
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.80 E-value=2e-17 Score=179.73 Aligned_cols=307 Identities=8% Similarity=-0.018 Sum_probs=209.0
Q ss_pred CccccceeeecCcceEEEeeC-CC-----eEEEEEeec---------Cc------------------------cceEEEE
Q 008820 219 GADIDQARAAGGVKDLVNGLS-KG-----NVKFKDLQG---------HR------------------------DCVTGLA 259 (552)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~-~~-----~~~~~~l~~---------H~------------------------~~V~~l~ 259 (552)
+..+..+.++++++.+++... ++ .+.+|++.+ |. ..|.+++
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 115 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQ 115 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCE
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeE
Confidence 334677888889988888877 66 677776432 22 2378899
Q ss_pred Ec--CCEEEEEeCCCcEEEEeCCCCe--EEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCccccccc
Q 008820 260 VG--GGFLFSSSFDKSIHVWSLKDFS--HVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWN 335 (552)
Q Consensus 260 ~s--~~~l~s~s~dg~I~iwd~~~~~--~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~ 335 (552)
|+ |++|++++. +.|++||+.++. ....+..|...+..++|+|++..+ ++++ ++.|++||+.++........
T Consensus 116 ~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~l-a~~~-~~~i~~~d~~~g~~~~~~~~-- 190 (741)
T 2ecf_A 116 WSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFV-SFIR-GRNLWVIDLASGRQMQLTAD-- 190 (741)
T ss_dssp ECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEE-EEEE-TTEEEEEETTTTEEEECCCC--
T ss_pred ECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEE-EEEe-CCcEEEEecCCCCEEEeccC--
Confidence 99 899999886 899999999873 345567788899999999988744 5554 56999999986543221111
Q ss_pred cCCCce--------------eeeEEEEeeCCCEEEEeeCCC---------------------------------cEEEEE
Q 008820 336 EEKDWR--------------YSGIHALTTSGRYLYTGSGDR---------------------------------TIKAWS 368 (552)
Q Consensus 336 ~~~~~~--------------~~~~~~~~~~~~~l~sgs~dg---------------------------------~i~iwd 368 (552)
..... .....+++|||+.|++++.|+ .|++||
T Consensus 191 -~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d 269 (741)
T 2ecf_A 191 -GSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVIS 269 (741)
T ss_dssp -CCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEEC
T ss_pred -CccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEE
Confidence 11000 012358999999999887765 789999
Q ss_pred CCC-CceeEEec--CCCCCeEEEEEe-CCEEEEEeC-----CCcEEEEECCCCceeEEEecCCCCce--EEEEEEcCCCC
Q 008820 369 LLD-GTLSCTMS--GHKSAVSTLAVC-NGVLYSGSR-----DGTIRLWSLSDHSLLTVLEEDSSGAV--SSVLSLTAVQH 437 (552)
Q Consensus 369 ~~~-~~~~~~~~--~h~~~v~~l~~~-~~~l~s~~~-----dg~i~iwd~~~~~~~~~~~~~~~~~~--~~~~~~s~~~~ 437 (552)
+.+ ++...... .|...+.+++|. +..|++++. +..|++||+.+++....+..+....+ ...+.|+|||+
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spdg~ 349 (741)
T 2ecf_A 270 PAEQAQTQWIDLGKEQDIYLARVNWRDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLDDGS 349 (741)
T ss_dssp SSTTCCCEEECCCSCSSEEEEEEEEEETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECTTSC
T ss_pred CCCCCceEEecCCCCcceEEEEEEeCCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECCCCe
Confidence 988 87665443 477788899983 236666553 57899999999988776665432211 11258999999
Q ss_pred EEEEEECCCcEEEEe--CCcceeeeecccceEEEE---EecCCEEEE-EeCCC--eEEEEecCC-CeeeeeeccCCCccc
Q 008820 438 TLVVSHESGSIKVWR--NDKFMKSMQTHKGSVFAV---FLEGKWLFT-GGWDK--TVSVQELAG-DEFEEDVIPTGAIPC 508 (552)
Q Consensus 438 ~l~~g~~dg~i~iwd--~~~~~~~~~~h~~~v~~v---~~~~~~l~s-gs~dg--~i~iwd~~~-~~~~~~~~~~~~~~~ 508 (552)
++++++.||.+++|. .......+..|...+..+ +++++.|+. ++.++ .+++|++.. +.....+..
T Consensus 350 ~~~~~~~~g~~~l~~~~~~~~~~~l~~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~g~~~~~l~~------ 423 (741)
T 2ecf_A 350 ILWSSERTGFQHLYRIDSKGKAAALTHGNWSVDELLAVDEKAGLAYFRAGIESARESQIYAVPLQGGQPQRLSK------ 423 (741)
T ss_dssp EEEEECTTSSCEEEEECSSSCEEESCCSSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEETTCCCCEECCC------
T ss_pred EEEEecCCCccEEEEEcCCCCeeeeeecceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEEcCCCCeeeccc------
Confidence 999999999877775 322266777777777654 448887754 55555 899999863 322222222
Q ss_pred CcceEEEEEeCC--eEEEE-eCC---CeEEEEEec
Q 008820 509 GSVITALLYWQG--KLFVG-CAD---RTVKIALCN 537 (552)
Q Consensus 509 ~~~v~~l~~~~~--~l~s~-s~D---g~v~iw~~~ 537 (552)
...+.+++|+++ .++.. +.. +.+.+|+..
T Consensus 424 ~~~~~~~~~spdg~~l~~~~~~~~~p~~~~l~~~~ 458 (741)
T 2ecf_A 424 APGMHSASFARNASVYVDSWSNNSTPPQIELFRAN 458 (741)
T ss_dssp SCSEEEEEECTTSSEEEEEEEETTEEEEEEEEETT
T ss_pred CCCceEEEECCCCCEEEEEecCCCCCCeEEEEEcC
Confidence 344778999953 34443 332 467777764
No 138
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.79 E-value=9.9e-17 Score=173.19 Aligned_cols=275 Identities=8% Similarity=0.039 Sum_probs=186.0
Q ss_pred cceEEEEEc-CCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCC-----CC
Q 008820 253 DCVTGLAVG-GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSF-----PL 326 (552)
Q Consensus 253 ~~V~~l~~s-~~~l~s~s~dg~I~iwd~~~~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~-----~~ 326 (552)
..|.+++|+ .+.++.+ .|++|++||+.+++... +..+...+.+++|+|++..+ +++ .|+.|++||+.+ +.
T Consensus 82 ~~v~~~~~spd~~~~~~-~~~~i~~~d~~~~~~~~-l~~~~~~~~~~~~SpdG~~l-a~~-~~~~i~v~~~~~~~~~~g~ 157 (706)
T 2z3z_A 82 FPSFRTLDAGRGLVVLF-TQGGLVGFDMLARKVTY-LFDTNEETASLDFSPVGDRV-AYV-RNHNLYIARGGKLGEGMSR 157 (706)
T ss_dssp CCCEEEEETTTTEEEEE-ETTEEEEEETTTTEEEE-EECCTTCCTTCEECTTSSEE-EEE-ETTEEEEEECBCTTSCCCC
T ss_pred cCceeEEECCCCeEEEE-ECCEEEEEECCCCceEE-ccCCcccccCCcCCCCCCEE-EEE-ECCeEEEEecCcccccCCC
Confidence 469999999 5555555 46999999999887654 44567788999999988754 443 679999999987 54
Q ss_pred CCccccccccCC---------CceeeeEEEEeeCCCEEEEee---------------------------------CCCcE
Q 008820 327 GHEPLKKWNEEK---------DWRYSGIHALTTSGRYLYTGS---------------------------------GDRTI 364 (552)
Q Consensus 327 ~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~l~sgs---------------------------------~dg~i 364 (552)
............ .........++|||++|++++ .+..|
T Consensus 158 ~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l 237 (706)
T 2z3z_A 158 AIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTV 237 (706)
T ss_dssp CEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEE
T ss_pred cEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEE
Confidence 332211111100 000013457999999999887 45679
Q ss_pred EEEECCCCceeEEec--CCCCCeEEEEEe-CC-EEEEEeCCC-----cEEEEECCCCceeEEEe-cCCCCce--EEEEEE
Q 008820 365 KAWSLLDGTLSCTMS--GHKSAVSTLAVC-NG-VLYSGSRDG-----TIRLWSLSDHSLLTVLE-EDSSGAV--SSVLSL 432 (552)
Q Consensus 365 ~iwd~~~~~~~~~~~--~h~~~v~~l~~~-~~-~l~s~~~dg-----~i~iwd~~~~~~~~~~~-~~~~~~~--~~~~~~ 432 (552)
++||+.+++...... .|...+.+++|+ ++ .|++++.|+ .|++||+.+++....+. ....... ...+.|
T Consensus 238 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~ 317 (706)
T 2z3z_A 238 GIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTF 317 (706)
T ss_dssp EEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEE
T ss_pred EEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCcee
Confidence 999999887655442 467789999999 44 788877775 89999999984433332 2211111 122589
Q ss_pred cC--CCCEEEEEECCCcEEEEeC---CcceeeeecccceEEE-EEe--cCCEEEEEeC-CC----eEEEEecCCCeeeee
Q 008820 433 TA--VQHTLVVSHESGSIKVWRN---DKFMKSMQTHKGSVFA-VFL--EGKWLFTGGW-DK----TVSVQELAGDEFEED 499 (552)
Q Consensus 433 s~--~~~~l~~g~~dg~i~iwd~---~~~~~~~~~h~~~v~~-v~~--~~~~l~sgs~-dg----~i~iwd~~~~~~~~~ 499 (552)
+| +|+++++++.||.+++|+. ++....+..|...+.+ +.| +++.|+.++. ++ .|..||+.++.....
T Consensus 318 sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~l 397 (706)
T 2z3z_A 318 LPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGKTKDL 397 (706)
T ss_dssp CTTCSSEEEEEECTTSSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCCCEES
T ss_pred ecCCCCEEEEEEccCCccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCCceec
Confidence 99 9999999999999999863 3456677777776755 444 8887766554 44 677777776643222
Q ss_pred eccCCCcccCcceEEEEEeCC--eEEEE-eCC---CeEEEEEecC
Q 008820 500 VIPTGAIPCGSVITALLYWQG--KLFVG-CAD---RTVKIALCNR 538 (552)
Q Consensus 500 ~~~~~~~~~~~~v~~l~~~~~--~l~s~-s~D---g~v~iw~~~~ 538 (552)
. +...+.+++|+++ .++.+ +.+ +.|++|+++.
T Consensus 398 -~------~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~ 435 (706)
T 2z3z_A 398 -T------PESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGK 435 (706)
T ss_dssp -C------CSSSEEEEEECTTSSEEEEEEECSSCSCEEEEEESSS
T ss_pred -c------CCCceEEEEECCCCCEEEEEecCCCCCcEEEEEECCC
Confidence 1 1445888999953 35554 333 5699999874
No 139
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=99.79 E-value=1.7e-20 Score=177.53 Aligned_cols=111 Identities=19% Similarity=0.214 Sum_probs=80.6
Q ss_pred hhhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cc
Q 008820 13 VAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QF 89 (552)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf 89 (552)
..|+. |+|+.+..........+++|||.|||||++. | ..+++++|||||||+|||||||+ ||
T Consensus 170 ~vKl~DFGla~~~~~~~~~~~~~~~~GTp~YmAPEvl~------~---------~~y~~~~DiWSlGvilyeml~G~~PF 234 (311)
T 4aw0_A 170 HIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLT------E---------KSACKSSDLWALGCIIYQLVAGLPPF 234 (311)
T ss_dssp CEEECCCTTCEECCTTTTCCCBCCCCSCGGGCCHHHHH------H---------SCBCHHHHHHHHHHHHHHHHHSSCSS
T ss_pred CEEEEEcCCceecCCCCCcccccCcccCcccCCHHHHc------C---------CCCCcHHHHHHHHHHHHHHHhCCCCC
Confidence 45666 8898886554444577899999999999993 2 45678999999999999999999 99
Q ss_pred hHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHH
Q 008820 90 TKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVW 159 (552)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~ 159 (552)
.+.+...+ ...+.......+....+++.+++.+||++||.+||++.++.
T Consensus 235 ~~~~~~~~---------------------~~~i~~~~~~~p~~~s~~~~dli~~lL~~dp~~R~t~~e~~ 283 (311)
T 4aw0_A 235 RAGNEGLI---------------------FAKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEME 283 (311)
T ss_dssp CCSSHHHH---------------------HHHHHHTCCCCCTTCCHHHHHHHHHHSCSSGGGSTTSGGGT
T ss_pred CCCCHHHH---------------------HHHHHcCCCCCCcccCHHHHHHHHHHccCCHhHCcChHHHc
Confidence 77554422 11111111111223455699999999999999999988753
No 140
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.79 E-value=2e-17 Score=157.68 Aligned_cols=248 Identities=12% Similarity=0.113 Sum_probs=166.8
Q ss_pred EEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCC-CCCCccccccccCCCceeeeE
Q 008820 267 SSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSF-PLGHEPLKKWNEEKDWRYSGI 345 (552)
Q Consensus 267 s~s~dg~I~iwd~~~~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~-~~~~~~~~~~~~~~~~~~~~~ 345 (552)
+++.|++|++||+.+++... +..|...|.+++|+|++. ++++++ ++.|++||+.+ +........ +.. .....
T Consensus 17 ~~~~~~~i~~~d~~~~~~~~-~~~~~~~v~~~~~spdg~-~l~~~~-~~~i~~~d~~~~~~~~~~~~~---~~~-~~~~~ 89 (297)
T 2ojh_A 17 GGSMRSSIEIFNIRTRKMRV-VWQTPELFEAPNWSPDGK-YLLLNS-EGLLYRLSLAGDPSPEKVDTG---FAT-ICNND 89 (297)
T ss_dssp -CCCCEEEEEEETTTTEEEE-EEEESSCCEEEEECTTSS-EEEEEE-TTEEEEEESSSCCSCEECCCT---TCC-CBCSC
T ss_pred CCCcceeEEEEeCCCCceee-eccCCcceEeeEECCCCC-EEEEEc-CCeEEEEeCCCCCCceEeccc---ccc-ccccc
Confidence 35678999999999988764 455889999999999877 445554 88999999987 543322211 111 11123
Q ss_pred EEEeeCCCEEEEee--CCCcEEEE--ECCCCceeEEecCCCCCeEEEEEe-CC-EEE-EEeCCCcEEEEECCC-CceeEE
Q 008820 346 HALTTSGRYLYTGS--GDRTIKAW--SLLDGTLSCTMSGHKSAVSTLAVC-NG-VLY-SGSRDGTIRLWSLSD-HSLLTV 417 (552)
Q Consensus 346 ~~~~~~~~~l~sgs--~dg~i~iw--d~~~~~~~~~~~~h~~~v~~l~~~-~~-~l~-s~~~dg~i~iwd~~~-~~~~~~ 417 (552)
.+++++++.+++++ .++...+| +..+++ ...+..+. .+.+++|+ ++ .++ +++.|+.+++|++.. +.....
T Consensus 90 ~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~-~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~ 167 (297)
T 2ojh_A 90 HGISPDGALYAISDKVEFGKSAIYLLPSTGGT-PRLMTKNL-PSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETR 167 (297)
T ss_dssp CEECTTSSEEEEEECTTTSSCEEEEEETTCCC-CEECCSSS-SEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEE
T ss_pred eEECCCCCEEEEEEeCCCCcceEEEEECCCCc-eEEeecCC-CccceEECCCCCEEEEEECCCCceEEEEEECCCCcceE
Confidence 57899999999988 33445555 555554 34444333 48899999 33 555 788999999998642 223333
Q ss_pred EecCCCCceEEEEEEcCCCCEEEEEE-CCCcEEEEeC---CcceeeeecccceEEEEEe--cCCEEEEEeCC--------
Q 008820 418 LEEDSSGAVSSVLSLTAVQHTLVVSH-ESGSIKVWRN---DKFMKSMQTHKGSVFAVFL--EGKWLFTGGWD-------- 483 (552)
Q Consensus 418 ~~~~~~~~~~~~~~~s~~~~~l~~g~-~dg~i~iwd~---~~~~~~~~~h~~~v~~v~~--~~~~l~sgs~d-------- 483 (552)
+..+ ...+.. +.|+|+++.+++++ .++.+++|+. ......+..|...+.++.| ++++|++++.+
T Consensus 168 ~~~~-~~~~~~-~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~ 245 (297)
T 2ojh_A 168 LTHG-EGRNDG-PDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPR 245 (297)
T ss_dssp CCCS-SSCEEE-EEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCS
T ss_pred cccC-CCcccc-ceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccc
Confidence 3333 333444 69999999888766 5889999974 3456677778888877776 89999888766
Q ss_pred ---CeEEEEecCCCeeeeeeccCCCcccCcceEEEEEeCC--eEEEEeCC
Q 008820 484 ---KTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQG--KLFVGCAD 528 (552)
Q Consensus 484 ---g~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~--~l~s~s~D 528 (552)
+.|++||+.+++......... +...+..++|+|+ .|++++.|
T Consensus 246 ~~~~~l~~~d~~~~~~~~~~~~~~---~~~~~~~~~~spdg~~l~~~~~~ 292 (297)
T 2ojh_A 246 DLDVRVQLMDMDGGNVETLFDLFG---GQGTMNSPNWSPDGDEFAYVRYF 292 (297)
T ss_dssp SEEEEEEEEETTSCSCEEEEEEEE---STTTSCSCCBCTTSSEEEEEEEC
T ss_pred cCceEEEEEecCCCCceeeeccCC---CCcccccceECCCCCEEEEEEec
Confidence 569999998876543322111 1445777889853 46666654
No 141
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.78 E-value=2.9e-17 Score=173.18 Aligned_cols=260 Identities=14% Similarity=0.109 Sum_probs=178.5
Q ss_pred ccceEEEEEc--CCEEEEEeC-CCcEEEEeCCCCeEEEEEeCCC-CCeEEEEEecCCCCEEEEEcC---CCcEEEEeCCC
Q 008820 252 RDCVTGLAVG--GGFLFSSSF-DKSIHVWSLKDFSHVHTFKGHD-HKVMAVVYVDEDQPLCISGDS---GGGIFVWSFSF 324 (552)
Q Consensus 252 ~~~V~~l~~s--~~~l~s~s~-dg~I~iwd~~~~~~~~~~~~h~-~~v~~v~~~~~~~~~l~s~~~---dg~i~vwd~~~ 324 (552)
..+|.+++|+ |++||+++. ||+++||++++++..+ +..|. ..+..++|+|+ .++++++. +...++|.++.
T Consensus 21 ~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~~-lt~~~~~~~~~~~~spd--~~l~~~~~~~g~~~~~l~~~~~ 97 (582)
T 3o4h_A 21 AVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETVK-LNREPINSVLDPHYGVG--RVILVRDVSKGAEQHALFKVNT 97 (582)
T ss_dssp HSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEEE-CCSSCCSEECEECTTCS--EEEEEEECSTTSCCEEEEEEET
T ss_pred ccchheeecCCCCCeEEEEEccCCceeEEEEcCCCcEe-eecccccccccccCCCC--eEEEEeccCCCCcceEEEEEec
Confidence 4579999998 899999887 9999999997766554 44444 68999999987 57777665 56667776654
Q ss_pred --CCCCccccccccCCCceeeeEEEEeeCCC-EEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe--CCEEEEEe
Q 008820 325 --PLGHEPLKKWNEEKDWRYSGIHALTTSGR-YLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC--NGVLYSGS 399 (552)
Q Consensus 325 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~ 399 (552)
......+.. ... ..+.+++++++ .+++.+.++.+.+||+.+++.......+. .+++|+ +..+++++
T Consensus 98 ~~~g~~~~l~~---~~~---~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~---~~~~~spDG~~la~~~ 168 (582)
T 3o4h_A 98 SRPGEEQRLEA---VKP---MRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPG---FGFVSDIRGDLIAGLG 168 (582)
T ss_dssp TSTTCCEECTT---SCS---BEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESS---CEEEEEEETTEEEEEE
T ss_pred cCCCccccccC---CCC---ceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCCC---ceEEECCCCCEEEEEE
Confidence 222222211 111 12458899987 33444444556699999887765554333 788888 44888777
Q ss_pred CC----CcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEECCC--cEEEEeCCc-ceeeeecccceEEE---
Q 008820 400 RD----GTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESG--SIKVWRNDK-FMKSMQTHKGSVFA--- 469 (552)
Q Consensus 400 ~d----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg--~i~iwd~~~-~~~~~~~h~~~v~~--- 469 (552)
.| +.|++||+.+++.. .+..+ .+.... .+|+|||+.|+++..++ .|++||... ....+..|...+..
T Consensus 169 ~~~~~~~~i~~~d~~~g~~~-~l~~~-~~~~~~-~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~ 245 (582)
T 3o4h_A 169 FFGGGRVSLFTSNLSSGGLR-VFDSG-EGSFSS-ASISPGMKVTAGLETAREARLVTVDPRDGSVEDLELPSKDFSSYRP 245 (582)
T ss_dssp EEETTEEEEEEEETTTCCCE-EECCS-SCEEEE-EEECTTSCEEEEEECSSCEEEEEECTTTCCEEECCCSCSHHHHHCC
T ss_pred EcCCCCeEEEEEcCCCCCce-EeecC-CCcccc-ceECCCCCEEEEccCCCeeEEEEEcCCCCcEEEccCCCcChhhhhh
Confidence 77 78999999988765 44433 344444 79999999999888888 899999653 22255566554433
Q ss_pred -------EEecCCEEEEEeCCCeEEEEecCCCeeeeeeccCCCcccCcceEEEEEeCCe-EEEEeCCCe---EEEEEe
Q 008820 470 -------VFLEGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQGK-LFVGCADRT---VKIALC 536 (552)
Q Consensus 470 -------v~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~-l~s~s~Dg~---v~iw~~ 536 (552)
+++||..+++++.|+.+++|++ ++... .. ...+.+++|+++. +++++.+.. +.+|+.
T Consensus 246 ~~~~~~~~spdg~~~~~~~~~g~~~l~~~--g~~~~--~~------~~~v~~~~~sdg~~l~~~s~~~~p~~l~~~d~ 313 (582)
T 3o4h_A 246 TAITWLGYLPDGRLAVVARREGRSAVFID--GERVE--AP------QGNHGRVVLWRGKLVTSHTSLSTPPRIVSLPS 313 (582)
T ss_dssp SEEEEEEECTTSCEEEEEEETTEEEEEET--TEEEC--CC------SSEEEEEEEETTEEEEEEEETTEEEEEEEETT
T ss_pred ccccceeEcCCCcEEEEEEcCCcEEEEEE--CCeec--cC------CCceEEEEecCCEEEEEEcCCCCCCeEEEEcC
Confidence 4558889999999999999999 44332 11 3457888888665 666666643 444544
No 142
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.78 E-value=6.7e-17 Score=158.36 Aligned_cols=271 Identities=10% Similarity=0.085 Sum_probs=179.3
Q ss_pred EEEc--CCEEEEEeCCCcEEEEeCCCCeEEEEEeCCC-CCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCcccccc
Q 008820 258 LAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHD-HKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKW 334 (552)
Q Consensus 258 l~~s--~~~l~s~s~dg~I~iwd~~~~~~~~~~~~h~-~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~ 334 (552)
++++ +.++++++.+++|++||..+++.+..+..+. ..+..++|+|++..+++++..++.|.+||+.+++....+...
T Consensus 5 ~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~ 84 (349)
T 1jmx_B 5 PALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLS 84 (349)
T ss_dssp CCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESC
T ss_pred ccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcc
Confidence 3444 6788999999999999999999998887554 257889999988777778888999999999876433322211
Q ss_pred ccCC-CceeeeEEEEeeCCCEEEEeeCC------------CcEEEEECCCCce---eEEecCCCCCeEEEEEe-CCEEEE
Q 008820 335 NEEK-DWRYSGIHALTTSGRYLYTGSGD------------RTIKAWSLLDGTL---SCTMSGHKSAVSTLAVC-NGVLYS 397 (552)
Q Consensus 335 ~~~~-~~~~~~~~~~~~~~~~l~sgs~d------------g~i~iwd~~~~~~---~~~~~~h~~~v~~l~~~-~~~l~s 397 (552)
.... ........+++++++++++++.+ +.|.+||+.+++. +..+. +...+.+++|+ ++.+++
T Consensus 85 ~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~dg~l~~ 163 (349)
T 1jmx_B 85 SVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFP-MPRQVYLMRAADDGSLYV 163 (349)
T ss_dssp CSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEE-CCSSCCCEEECTTSCEEE
T ss_pred cccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeecc-CCCcccceeECCCCcEEE
Confidence 1000 00111235789999999988865 8999999988543 33444 33468899998 444555
Q ss_pred EeCCCcEEEEECCCCceeEEEecCCCCc----------------------eEEEEEEcCCCC-----------EEEEEEC
Q 008820 398 GSRDGTIRLWSLSDHSLLTVLEEDSSGA----------------------VSSVLSLTAVQH-----------TLVVSHE 444 (552)
Q Consensus 398 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~----------------------~~~~~~~s~~~~-----------~l~~g~~ 444 (552)
++ +.|++||+.+++.+..+....... ....+.+++++. ++.....
T Consensus 164 ~~--~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 241 (349)
T 1jmx_B 164 AG--PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLK 241 (349)
T ss_dssp ES--SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETT
T ss_pred cc--CcEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEecc
Confidence 54 349999999999887775432100 111134443331 1122334
Q ss_pred CCcEEEEeCCcceeeeecccceEE--EEEe-cCCEEEEEeCCCeEEEEecCCCeeeeeeccCCCcccCcceEEEEEeC--
Q 008820 445 SGSIKVWRNDKFMKSMQTHKGSVF--AVFL-EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQ-- 519 (552)
Q Consensus 445 dg~i~iwd~~~~~~~~~~h~~~v~--~v~~-~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~~-- 519 (552)
++.+++|+... +...+. ++++ ++++++++ ++.|++||+.+++....... ...+.+++|++
T Consensus 242 ~~~~~~~~~~~-------~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~------~~~~~~~~~s~dg 306 (349)
T 1jmx_B 242 TGKTHTQEFAD-------LTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAANL------DHTYYCVAFDKKG 306 (349)
T ss_dssp TCCEEEEEEEE-------CSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEEC------SSCCCEEEECSSS
T ss_pred CCcEEeccccc-------CCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEcC------CCCccceEECCCC
Confidence 45555555421 233333 4456 88899888 88999999998877655443 22356889985
Q ss_pred CeEEEEeCCCeEEEEEecCCcceeEEEe
Q 008820 520 GKLFVGCADRTVKIALCNRQIPEIFSLL 547 (552)
Q Consensus 520 ~~l~s~s~Dg~v~iw~~~~~~~~~~~~~ 547 (552)
+.|++++.++.|++||.+ +.+.+.++.
T Consensus 307 ~~l~~~~~~~~v~v~d~~-~~~~~~~~~ 333 (349)
T 1jmx_B 307 DKLYLGGTFNDLAVFNPD-TLEKVKNIK 333 (349)
T ss_dssp SCEEEESBSSEEEEEETT-TTEEEEEEE
T ss_pred CEEEEecCCCeEEEEecc-ccceeeeee
Confidence 358888889999999997 455555554
No 143
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.77 E-value=3.1e-16 Score=176.45 Aligned_cols=310 Identities=13% Similarity=0.071 Sum_probs=213.9
Q ss_pred ccccceeeecCcceEEEeeCC----C--eEEEE--------EeecCccce-------EEEEEc--CCEEEEEeCC-----
Q 008820 220 ADIDQARAAGGVKDLVNGLSK----G--NVKFK--------DLQGHRDCV-------TGLAVG--GGFLFSSSFD----- 271 (552)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~----~--~~~~~--------~l~~H~~~V-------~~l~~s--~~~l~s~s~d----- 271 (552)
..+....++++++.++....+ + .+.+| .+.+|...+ .+++|+ |+.+++++.+
T Consensus 53 ~~v~~~~~SPDG~~la~~s~~~~~~~~~~i~~~d~~~g~~~~lt~~~~~~~~~~~~~~~~~~SpDg~ll~~~~~~~~~~~ 132 (1045)
T 1k32_A 53 GVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGEIKRITYFSGKSTGRRMFTDVAGFDPDGNLIISTDAMQPFSS 132 (1045)
T ss_dssp SEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTEEEECCCCCEEEETTEECSEEEEECTTCCEEEEECTTSSSTT
T ss_pred CcccCeEECCCCCEEEEEEeeccCCCCCeEEEEECCCCCeEEcccCCCcccccccccccccCCCCCEEEEEECCcCCCcc
Confidence 346677778888777765432 2 34444 356788888 999999 7777777754
Q ss_pred -CcEEEEeCCCCeEE-------------------------------------------------EEEeCCCCCeEEEEEe
Q 008820 272 -KSIHVWSLKDFSHV-------------------------------------------------HTFKGHDHKVMAVVYV 301 (552)
Q Consensus 272 -g~I~iwd~~~~~~~-------------------------------------------------~~~~~h~~~v~~v~~~ 301 (552)
..|.+||+.+++.. ..+.+|...+.++.|+
T Consensus 133 ~~~l~~~~~~~g~~~~l~~~~~~~~~~spG~l~~~~~~~~~~~~~~~~g~~~~~lw~~~~~~~~~~l~~~~~~v~~~~~s 212 (1045)
T 1k32_A 133 MTCLYRVENDGINFVPLNLGPATHILFADGRRVIGRNTFELPHWKGYRGGTRGKIWIEVNSGAFKKIVDMSTHVSSPVIV 212 (1045)
T ss_dssp CCEEEEEEGGGTEEEECCSCSCSEEEEETTEEEEEESCSCCTTSTTCCSTTCCEEEEEEETTEEEEEECCSSCCEEEEEE
T ss_pred cceEEEEECCCCCeEEecCCCcceeeeCCCEEEEeccCCCccccccccCCCcCCEEEECCCCCeEECcCCCCcccceEEe
Confidence 35777777655422 2235677888889998
Q ss_pred cCCCCEEEEEcCCCcEEEEeCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCceeEEecC-
Q 008820 302 DEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSG- 380 (552)
Q Consensus 302 ~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~- 380 (552)
++ .++++++.|+.+.+|.++.... ....+..+.. ....+++++|+.++++ .++.|++||+...+ +..+.+
T Consensus 213 ~d--~l~~~~~~dg~~~l~~~~~~g~--~~~~l~~~~~---~~~~~~SpDG~~la~~-~~~~i~~~d~~~~~-l~~l~~~ 283 (1045)
T 1k32_A 213 GH--RIYFITDIDGFGQIYSTDLDGK--DLRKHTSFTD---YYPRHLNTDGRRILFS-KGGSIYIFNPDTEK-IEKIEIG 283 (1045)
T ss_dssp TT--EEEEEECTTSSCEEEEEETTSC--SCEECCCCCS---SCEEEEEESSSCEEEE-ETTEEEEECTTTCC-EEECCCC
T ss_pred CC--EEEEEEeccCceEEEEEeCCCC--cceEecCCCC---cceeeEcCCCCEEEEE-eCCEEEEecCCceE-eeeeccC
Confidence 75 5777888899999998764221 1112222221 1234889999988887 48999999995443 335554
Q ss_pred ----------CCCCeEEEEEe-CC--EEEEEeCCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEECCCc
Q 008820 381 ----------HKSAVSTLAVC-NG--VLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGS 447 (552)
Q Consensus 381 ----------h~~~v~~l~~~-~~--~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~ 447 (552)
|...+.+++|+ ++ .+++++ ++.|++|++.+++... +..+ .......+.|+ +++.++.++.++.
T Consensus 284 ~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~~-~~~~-~~~~~~~~~~s-dg~~l~~~s~~~~ 359 (1045)
T 1k32_A 284 DLESPEDRIISIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVLK-VPEP-LRIRYVRRGGD-TKVAFIHGTREGD 359 (1045)
T ss_dssp CCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBEEE-CSCC-SCEEEEEECSS-SEEEEEEEETTEE
T ss_pred cccccccccccccccceeeecCCCCCEEEEEE-cCEEEEEcCCCCceEE-ccCC-CcceEEeeeEc-CCCeEEEEECCCc
Confidence 33468999998 55 677766 8899999998876543 3332 33123336889 9999999998888
Q ss_pred EE-EEeCCc-ceeeeecccceEEEEEe--cCCEEEEEeCCCeEEEEecCCCeeeeeeccCCCcccCcceEEEEEeCC--e
Q 008820 448 IK-VWRNDK-FMKSMQTHKGSVFAVFL--EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQG--K 521 (552)
Q Consensus 448 i~-iwd~~~-~~~~~~~h~~~v~~v~~--~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~--~ 521 (552)
+. +||... ....+.+|...+..+.| ||++|++++.++.|++||+.+++....... +...+.+++|+|+ .
T Consensus 360 l~~~~d~~~~~~~~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~-----~~~~v~~~~~SpDG~~ 434 (1045)
T 1k32_A 360 FLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERS-----REAMITDFTISDNSRF 434 (1045)
T ss_dssp EEEEEETTTCCEEECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEEC-----SSSCCCCEEECTTSCE
T ss_pred eEEEEECCCCCceEecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccC-----CCCCccceEECCCCCe
Confidence 88 888643 33445577777877776 999999999999999999998876655422 2456788999953 4
Q ss_pred EEEEeCCC----------eEEEEEecCCcceeEEEecc
Q 008820 522 LFVGCADR----------TVKIALCNRQIPEIFSLLLH 549 (552)
Q Consensus 522 l~s~s~Dg----------~v~iw~~~~~~~~~~~~~gh 549 (552)
|++++.++ .|++||+.. .. +..+.+|
T Consensus 435 la~~~~~~~~~~~~~~~~~i~l~d~~~-g~-~~~l~~~ 470 (1045)
T 1k32_A 435 IAYGFPLKHGETDGYVMQAIHVYDMEG-RK-IFAATTE 470 (1045)
T ss_dssp EEEEEEECSSTTCSCCEEEEEEEETTT-TE-EEECSCS
T ss_pred EEEEecCccccccCCCCCeEEEEECCC-Cc-EEEeeCC
Confidence 77766544 999999873 22 5555544
No 144
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=99.77 E-value=3.5e-20 Score=175.89 Aligned_cols=125 Identities=17% Similarity=0.221 Sum_probs=78.1
Q ss_pred hhhhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-C
Q 008820 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (552)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-p 88 (552)
-.+|++ |+|+.+........++..+|||.|||||++ .+ ...+.++.+||||||||+||||+||+ |
T Consensus 169 ~~~Ki~DFGla~~~~~~~~~~~~~~~~GT~~ymAPE~l------~~------~~~~~y~~ksDVwS~Gvvl~Elltg~~P 236 (307)
T 3omv_A 169 LTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVI------RM------QDNNPFSFQSDVYSYGIVLYELMTGELP 236 (307)
T ss_dssp EEEEECCCSSCBC------------CCCCTTSCCHHHH------HC------CSSCCCCHHHHHHHHHHHHHHHHHSSCT
T ss_pred CcEEEeeccCceecccCCcceeecccccCCCccCHHHh------hc------cCCCCCCcHHHhHhHHHHHHHHHHCCCC
Confidence 457888 888777654443446788999999999999 22 01245788999999999999999999 9
Q ss_pred chHHHhh-hhhhccccCCCchhhhhhhhHHHHHHH-HHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHHhh
Q 008820 89 FTKELID-YIRCVSTKASDDNIACLGMYMAWMEKV-TYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIREL 165 (552)
Q Consensus 89 f~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~~~ 165 (552)
|...+.. .+. ....... ...+.......+.++.+++.+|++.+|.+||++.++.+.+..+
T Consensus 237 f~~~~~~~~~~-----------------~~~~~~~~~p~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l 298 (307)
T 3omv_A 237 YSHINNRDQII-----------------FMVGRGYASPDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELL 298 (307)
T ss_dssp TTTCCCHHHHH-----------------HHHHTTCCCCCSTTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHH
T ss_pred CCCCChHHHHH-----------------HHHhcCCCCCCcccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence 9753322 110 0000000 0000111122344689999999999999999999998877654
No 145
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=99.77 E-value=1.1e-19 Score=174.85 Aligned_cols=122 Identities=15% Similarity=0.148 Sum_probs=79.0
Q ss_pred hhhhhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhh-CC
Q 008820 11 KSVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE 87 (552)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~llt-g~ 87 (552)
.-.+|++ |+|+.+...+.....+..+|||.|||||++ . ...++.++|||||||+||||+| |+
T Consensus 194 ~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~------~---------~~~~~~~sDvwS~Gvvl~Ellt~G~ 258 (329)
T 4aoj_A 194 GLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESI------L---------YRKFTTESDVWSFGVVLWEIFTYGK 258 (329)
T ss_dssp TTEEEECCCC----------------CCCCGGGCCHHHH------T---------TCCCCHHHHHHHHHHHHHHHHTTSC
T ss_pred CCcEEEcccccceeccCCCcceecCcccccccccChhhh------c---------CCCCCccccccchHHHHHHHHcCCC
Confidence 4468888 888887766655456788999999999999 3 3667899999999999999999 89
Q ss_pred -CchHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHH-HhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHHhh
Q 008820 88 -QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYL-LENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIREL 165 (552)
Q Consensus 88 -pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~~~ 165 (552)
||...+...+. ..+..- ..+.+...++++.+++.+|++.+|.+||++.++.+.+..+
T Consensus 259 ~Pf~~~~~~~~~---------------------~~i~~g~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l 317 (329)
T 4aoj_A 259 QPWYQLSNTEAI---------------------DCITQGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQAL 317 (329)
T ss_dssp CTTCSSCHHHHH---------------------HHHHHTCCCCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHH
T ss_pred CCCCCCCHHHHH---------------------HHHHcCCCCCCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHH
Confidence 99764333111 111000 0111223455699999999999999999999999988887
Q ss_pred hcC
Q 008820 166 IIK 168 (552)
Q Consensus 166 ~~~ 168 (552)
...
T Consensus 318 ~~~ 320 (329)
T 4aoj_A 318 AQA 320 (329)
T ss_dssp HHS
T ss_pred hhC
Confidence 643
No 146
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=99.77 E-value=6.9e-20 Score=175.56 Aligned_cols=120 Identities=15% Similarity=0.169 Sum_probs=81.1
Q ss_pred hhcc--cccccccccchh---hhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-
Q 008820 14 AKVG--CVGSRICDKEVG---LFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE- 87 (552)
Q Consensus 14 ~~~~--~~~~~~~~~~~~---~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~- 87 (552)
+|+. |+|+.+...... .-...++|||.|||||++ .| ..+++++|||||||+|||||||+
T Consensus 190 vKl~DFGla~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~------~~---------~~y~~~~DiwSlGvilyemltG~~ 254 (336)
T 4g3f_A 190 AALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVV------MG---------KPCDAKVDIWSSCCMMLHMLNGCH 254 (336)
T ss_dssp EEECCCTTCEEC------------CCCCCCGGGCCHHHH------TT---------CCCCTHHHHHHHHHHHHHHHHSSC
T ss_pred EEEeeCCCCeEccCCCcccceecCCccccCccccCHHHH------CC---------CCCCcHHHHHHHHHHHHHHHHCcC
Confidence 5777 888877654332 113457899999999999 33 56789999999999999999999
Q ss_pred CchHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHHhhh
Q 008820 88 QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELI 166 (552)
Q Consensus 88 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~~~~ 166 (552)
||.+.+...+. ..+....+. ....+....+.+.+++.+||+++|.+||++.++.+.+...+
T Consensus 255 Pf~~~~~~~~~-----------------~~i~~~~~~-~~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l 315 (336)
T 4g3f_A 255 PWTQYFRGPLC-----------------LKIASEPPP-IREIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKAL 315 (336)
T ss_dssp SSTTTCCSCCH-----------------HHHHHSCCG-GGGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCCCCHHHHH-----------------HHHHcCCCC-chhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHH
Confidence 99775433211 111111000 01112234556999999999999999999999988877654
No 147
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=99.77 E-value=9e-20 Score=170.16 Aligned_cols=110 Identities=19% Similarity=0.248 Sum_probs=68.0
Q ss_pred hhhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cc
Q 008820 13 VAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QF 89 (552)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf 89 (552)
-.|+. |+|+....... ...++|||.|||||++ .| ....++++|||||||+||||+||+ ||
T Consensus 150 ~vkl~DFGla~~~~~~~~---~~~~~GT~~Y~APE~~------~~--------~~y~~~~~DiwSlGvily~lltg~~PF 212 (275)
T 3hyh_A 150 NVKIADFGLSNIMTDGNF---LKTSCGSPNYAAPEVI------SG--------KLYAGPEVDVWSCGVILYVMLCRRLPF 212 (275)
T ss_dssp CEEECCSSCC------------------CTTSCHHHH------SS--------SSCCCTHHHHHHHHHHHHHHHHSSCSS
T ss_pred CEEEeecCCCeecCCCCc---cCCeeECcccCChhhh------cC--------CCCCCChhhhHHHHHHHHHHHHCCCCC
Confidence 35666 78877665543 5678999999999999 33 223467999999999999999999 99
Q ss_pred hHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 90 TKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
.+.+...+ ...+.......+.....++.+++.+||+.+|.+||++.++.+
T Consensus 213 ~~~~~~~~---------------------~~~i~~~~~~~p~~~s~~~~~li~~~L~~dP~~R~s~~eil~ 262 (275)
T 3hyh_A 213 DDESIPVL---------------------FKNISNGVYTLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp CCSSHHHH---------------------HHHHHHTCCCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred CCCCHHHH---------------------HHHHHcCCCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence 77554421 111111111112224456999999999999999999888765
No 148
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.76 E-value=4.6e-16 Score=152.62 Aligned_cols=256 Identities=13% Similarity=0.121 Sum_probs=166.8
Q ss_pred CeEEEEEeecCccceEEEEEc--CCEEEEEeC---CCcEEEEeCCCCe--EEEEEeCCCCCeEEEEEecCCCCEEEEEcC
Q 008820 241 GNVKFKDLQGHRDCVTGLAVG--GGFLFSSSF---DKSIHVWSLKDFS--HVHTFKGHDHKVMAVVYVDEDQPLCISGDS 313 (552)
Q Consensus 241 ~~~~~~~l~~H~~~V~~l~~s--~~~l~s~s~---dg~I~iwd~~~~~--~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~ 313 (552)
+.........+...+..++|+ ++ +++++. ++.|++||+.+++ .+..+..+...+..++|+|++..+++++..
T Consensus 28 g~~~~~~~~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~ 106 (347)
T 3hfq_A 28 KTLTNDGLLAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYH 106 (347)
T ss_dssp TEEEEEEEEEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETT
T ss_pred CeEEEeeeeeccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCC
Confidence 444444445566778889999 66 665554 6899999998776 445555677888999999988866666668
Q ss_pred CCcEEEEeCCCCCCCccccccccCC-------CceeeeEEEEeeCCCEEEEeeCCCcEEEEECC-CCceeE--EecC-CC
Q 008820 314 GGGIFVWSFSFPLGHEPLKKWNEEK-------DWRYSGIHALTTSGRYLYTGSGDRTIKAWSLL-DGTLSC--TMSG-HK 382 (552)
Q Consensus 314 dg~i~vwd~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~-~~~~~~--~~~~-h~ 382 (552)
++.|.+|++........+....... ........+++|+++.+++...++.|.+||+. +++... .+.. ..
T Consensus 107 ~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g 186 (347)
T 3hfq_A 107 KGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAG 186 (347)
T ss_dssp TTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTT
T ss_pred CCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCC
Confidence 8999999996433222222221110 00112235789999966666778899999998 554332 2222 23
Q ss_pred CCeEEEEEe-CC-EEEE-EeCCCcEEEEECCC--Cce--eEEEecCCCC----ceEEEEEEcCCCCEEE-EEECCCcEEE
Q 008820 383 SAVSTLAVC-NG-VLYS-GSRDGTIRLWSLSD--HSL--LTVLEEDSSG----AVSSVLSLTAVQHTLV-VSHESGSIKV 450 (552)
Q Consensus 383 ~~v~~l~~~-~~-~l~s-~~~dg~i~iwd~~~--~~~--~~~~~~~~~~----~~~~~~~~s~~~~~l~-~g~~dg~i~i 450 (552)
..+..++|+ ++ ++++ +..++.|.+|++.. ++. +..+.....+ .....++|+|+|++|+ +...++.|.+
T Consensus 187 ~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v 266 (347)
T 3hfq_A 187 FGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAV 266 (347)
T ss_dssp CCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEE
T ss_pred CCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEE
Confidence 367889999 44 4554 56789999999874 443 2233322111 2234479999999875 5556899999
Q ss_pred EeCC-----cceeeeecccceEEEEEe--cCCEEEEEeCC-CeEEEEec--CCCeee
Q 008820 451 WRND-----KFMKSMQTHKGSVFAVFL--EGKWLFTGGWD-KTVSVQEL--AGDEFE 497 (552)
Q Consensus 451 wd~~-----~~~~~~~~h~~~v~~v~~--~~~~l~sgs~d-g~i~iwd~--~~~~~~ 497 (552)
||+. +.+..+..+...+..+.+ +|++|++++.+ +.|.+|++ .++++.
T Consensus 267 ~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~l~ 323 (347)
T 3hfq_A 267 FAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARDLTSGKLS 323 (347)
T ss_dssp EEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEE
T ss_pred EEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeCCCCeEE
Confidence 9965 233444455445555555 89988888765 89999954 455544
No 149
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.76 E-value=2.6e-16 Score=170.36 Aligned_cols=268 Identities=9% Similarity=-0.004 Sum_probs=173.8
Q ss_pred eecCcc---ceEEEEEc--CCEEEEEeCC---------CcEEEEeCCCCeEEEEEe---CCCCCeEEEEEecCCCCEEEE
Q 008820 248 LQGHRD---CVTGLAVG--GGFLFSSSFD---------KSIHVWSLKDFSHVHTFK---GHDHKVMAVVYVDEDQPLCIS 310 (552)
Q Consensus 248 l~~H~~---~V~~l~~s--~~~l~s~s~d---------g~I~iwd~~~~~~~~~~~---~h~~~v~~v~~~~~~~~~l~s 310 (552)
+.+|.. .|.+++|+ |++|++++.+ +.|++||+.+++. ..+. +|...+..++|+|++..++ .
T Consensus 53 ~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~SPdG~~la-~ 130 (723)
T 1xfd_A 53 IEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDP-QSLDPPEVSNAKLQYAGWGPKGQQLI-F 130 (723)
T ss_dssp ECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCC-EECCCTTCCSCCCSBCCBCSSTTCEE-E
T ss_pred eccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCce-EeccCCccccccccccEECCCCCEEE-E
Confidence 445554 49999999 9999999875 7788999998876 3343 3445588999999887654 4
Q ss_pred EcCCCcEEEEeCCCCCCCccccccccCC------C-------ceeeeEEEEeeCCCEEEEeeCCC---------------
Q 008820 311 GDSGGGIFVWSFSFPLGHEPLKKWNEEK------D-------WRYSGIHALTTSGRYLYTGSGDR--------------- 362 (552)
Q Consensus 311 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~------~-------~~~~~~~~~~~~~~~l~sgs~dg--------------- 362 (552)
++. +.|++||+.++............. . .......+|+|||+.|++++.|+
T Consensus 131 ~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~ 209 (723)
T 1xfd_A 131 IFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSI 209 (723)
T ss_dssp EET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSS
T ss_pred EEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcC
Confidence 443 799999998764432221111000 0 00012468999999998887553
Q ss_pred -------------------cEEEEECCCCceeEEecCC------CCCeEEEEEe-CC-EEEEEeC----CCcEEEEECCC
Q 008820 363 -------------------TIKAWSLLDGTLSCTMSGH------KSAVSTLAVC-NG-VLYSGSR----DGTIRLWSLSD 411 (552)
Q Consensus 363 -------------------~i~iwd~~~~~~~~~~~~h------~~~v~~l~~~-~~-~l~s~~~----dg~i~iwd~~~ 411 (552)
.|++||+.+++....+..+ ...+.+++|+ ++ ++++.+. +..|++||+.+
T Consensus 210 ~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~ 289 (723)
T 1xfd_A 210 YPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATT 289 (723)
T ss_dssp SCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTT
T ss_pred CCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCC
Confidence 7999999988876666654 5678999999 55 5555543 35799999999
Q ss_pred CceeEEEecCCCCceE---EEEEEcCCCCEEEE--EECCC------cEEEEe-CC-cc---eeeeecccceEE---EEEe
Q 008820 412 HSLLTVLEEDSSGAVS---SVLSLTAVQHTLVV--SHESG------SIKVWR-ND-KF---MKSMQTHKGSVF---AVFL 472 (552)
Q Consensus 412 ~~~~~~~~~~~~~~~~---~~~~~s~~~~~l~~--g~~dg------~i~iwd-~~-~~---~~~~~~h~~~v~---~v~~ 472 (552)
++....+..++.+.+. ....|+|||+.|+. +..++ .|++|| .. .. ...+..+...+. ++++
T Consensus 290 g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~sp 369 (723)
T 1xfd_A 290 GVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDE 369 (723)
T ss_dssp CCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEET
T ss_pred CcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEeecCCeEEEeeeEEcC
Confidence 9877666543323221 12589999997765 45666 577787 32 23 455554333333 4556
Q ss_pred cCCEEEEEeCC---CeEEEEecCCCe--eeeeeccCCCcccCcceEEEEEeCC
Q 008820 473 EGKWLFTGGWD---KTVSVQELAGDE--FEEDVIPTGAIPCGSVITALLYWQG 520 (552)
Q Consensus 473 ~~~~l~sgs~d---g~i~iwd~~~~~--~~~~~~~~~~~~~~~~v~~l~~~~~ 520 (552)
||+.|+..+.+ +.+++|++.... ....+.. ...+...+..++|+++
T Consensus 370 dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~spd 420 (723)
T 1xfd_A 370 KGNKIYFLSTEDLPRRRQLYSANTVGNFNRQCLSC--DLVENCTYFSASFSHS 420 (723)
T ss_dssp TTTEEEEEESSSCTTCCEEEEECSSTTCCCBCSST--TSSSSCCCCEEEECTT
T ss_pred CCCEEEEEEcCCCCcceEEEEEeCCCCCCcceecc--cccCCCCeEEEEECCC
Confidence 99999876655 789999986432 1111111 0012445778899953
No 150
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=99.75 E-value=9.2e-20 Score=175.49 Aligned_cols=110 Identities=16% Similarity=0.262 Sum_probs=80.1
Q ss_pred hhhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cc
Q 008820 13 VAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QF 89 (552)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf 89 (552)
..|++ |+|+.+..... ..+.++|||.|||||++ .| ..+++++|||||||+||||+||+ ||
T Consensus 163 ~vKl~DFGla~~~~~~~~--~~~~~~GT~~YmAPE~l------~~---------~~y~~~~DiwSlGvilyemltG~~PF 225 (350)
T 4b9d_A 163 TVQLGDFGIARVLNSTVE--LARACIGTPYYLSPEIC------EN---------KPYNNKSDIWALGCVLYELCTLKHAF 225 (350)
T ss_dssp CEEECSTTEESCCCHHHH--HHHHHHSCCTTCCHHHH------TT---------CCCCHHHHHHHHHHHHHHHHHSSCSC
T ss_pred CEEEcccccceeecCCcc--cccccCCCccccCHHHH------CC---------CCCCcHHHHHHHHHHHHHHHHCCCCC
Confidence 45777 88887765533 36788999999999999 33 56789999999999999999999 99
Q ss_pred hHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHH-hhhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 90 TKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLL-ENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
.+.+...+. ..+.... .........++.+++.+||+++|.+||++.++.+
T Consensus 226 ~~~~~~~~~---------------------~~i~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 276 (350)
T 4b9d_A 226 EAGSMKNLV---------------------LKIISGSFPPVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILE 276 (350)
T ss_dssp CCSSHHHHH---------------------HHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred CCcCHHHHH---------------------HHHHcCCCCCCCccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 775544221 1111000 0111223456999999999999999999888755
No 151
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=99.75 E-value=1.3e-19 Score=170.58 Aligned_cols=109 Identities=14% Similarity=0.171 Sum_probs=75.3
Q ss_pred hhhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cc
Q 008820 13 VAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QF 89 (552)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf 89 (552)
.+|++ |+|+..... ..+.++|||.|||||++ .+++++++|||||||+||||+||+ ||
T Consensus 170 ~vKl~DFGla~~~~~~----~~~~~~GTp~YmAPE~~----------------~~~y~~~~DiwSlGvilyelltg~~Pf 229 (290)
T 3fpq_A 170 SVKIGDLGLATLKRAS----FAKAVIGTPEFMAPEMY----------------EEKYDESVDVYAFGMCMLEMATSEYPY 229 (290)
T ss_dssp CEEECCTTGGGGCCTT----SBEESCSSCCCCCGGGG----------------GTCCCTHHHHHHHHHHHHHHHHSSCTT
T ss_pred CEEEEeCcCCEeCCCC----ccCCcccCccccCHHHc----------------CCCCCcHHHHHHHHHHHHHHHHCCCCC
Confidence 46777 888654333 35678999999999998 235789999999999999999999 99
Q ss_pred hHHHh-hhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 90 TKELI-DYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 90 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
..... ..+. ..+.... .+........+++.+++.+||+++|.+||++.++.+
T Consensus 230 ~~~~~~~~~~-----------------~~i~~~~--~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~ 282 (290)
T 3fpq_A 230 SECQNAAQIY-----------------RRVTSGV--KPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp TTCSSHHHHH-----------------HHHTTTC--CCGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CCCCcHHHHH-----------------HHHHcCC--CCCCCCccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 65321 1110 0000000 011112234456999999999999999999887654
No 152
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=99.75 E-value=2.8e-19 Score=171.82 Aligned_cols=113 Identities=14% Similarity=0.213 Sum_probs=79.1
Q ss_pred hhhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cc
Q 008820 13 VAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QF 89 (552)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf 89 (552)
..|+. |+|+.+..... ..+.++|||.|||||++ . ...+++++|||||||+||||+||+ ||
T Consensus 208 ~vKl~DFGla~~~~~~~~--~~~~~~GTp~YmAPEvl------~---------~~~y~~~~DiWSlGvilyeml~G~~PF 270 (346)
T 4fih_A 208 RVKLSDFGFCAQVSKEVP--RRKSLVGTPYWMAPELI------S---------RLPYGPEVDIWSLGIMVIEMVDGEPPY 270 (346)
T ss_dssp CEEECCCTTCEECCSSSC--CBCCCCSCGGGCCHHHH------T---------TCCBCTHHHHHHHHHHHHHHHHSSCTT
T ss_pred CEEEecCcCceecCCCCC--cccccccCcCcCCHHHH------C---------CCCCCcHHHHHHHHHHHHHHHHCCCCC
Confidence 35777 88887765533 26789999999999999 2 356789999999999999999999 99
Q ss_pred hHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 90 TKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
.+.+...+. ..+....+ .....+.....++.+++.+||++||.+||++.++.+
T Consensus 271 ~~~~~~~~~-----------------~~i~~~~~-~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~ 323 (346)
T 4fih_A 271 FNEPPLKAM-----------------KMIRDNLP-PRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLK 323 (346)
T ss_dssp TTSCHHHHH-----------------HHHHHSSC-CCCSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred CCcCHHHHH-----------------HHHHcCCC-CCCCccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 765433111 11111000 000111223456999999999999999999877544
No 153
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=99.75 E-value=1.6e-19 Score=171.38 Aligned_cols=120 Identities=13% Similarity=0.202 Sum_probs=87.7
Q ss_pred hhhhhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhh-CC
Q 008820 11 KSVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE 87 (552)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~llt-g~ 87 (552)
.-.+|++ |+|+.+...+.........||+.|||||++. ...++.++|||||||+||||+| |+
T Consensus 164 ~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~---------------~~~~~~k~DVwS~Gvvl~Ellt~G~ 228 (299)
T 4asz_A 164 NLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIM---------------YRKFTTESDVWSLGVVLWEIFTYGK 228 (299)
T ss_dssp GGCEEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHH---------------HCCCCHHHHHHHHHHHHHHHHTTTC
T ss_pred CCcEEECCcccceecCCCCceeecCceecChhhcCHHHHc---------------CCCCCchhhHHHHHHHHHHHHcCCC
Confidence 4468888 8888776665544456778999999999992 3567899999999999999999 89
Q ss_pred -CchHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHH-HhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHHhh
Q 008820 88 -QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYL-LENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIREL 165 (552)
Q Consensus 88 -pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~~~ 165 (552)
||.+.+..++. ..+..- ..+.+...+.++.+++.+|++.+|.+||++.++.+.+..+
T Consensus 229 ~Pf~~~~~~~~~---------------------~~i~~~~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~ 287 (299)
T 4asz_A 229 QPWYQLSNNEVI---------------------ECITQGRVLQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNL 287 (299)
T ss_dssp CTTTTSCHHHHH---------------------HHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CCCCCCCHHHHH---------------------HHHHcCCCCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence 99764433221 111000 0111222445699999999999999999999998887776
Q ss_pred h
Q 008820 166 I 166 (552)
Q Consensus 166 ~ 166 (552)
.
T Consensus 288 ~ 288 (299)
T 4asz_A 288 A 288 (299)
T ss_dssp H
T ss_pred H
Confidence 4
No 154
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.75 E-value=9.1e-16 Score=149.30 Aligned_cols=240 Identities=11% Similarity=0.051 Sum_probs=162.3
Q ss_pred EEeecCccceEEEEEc--CCEEEEEeC-CCcEEEEeCCCCeE-EEEEeCCCCCeEEEEEecCCCCEEEEEcCC-C--cEE
Q 008820 246 KDLQGHRDCVTGLAVG--GGFLFSSSF-DKSIHVWSLKDFSH-VHTFKGHDHKVMAVVYVDEDQPLCISGDSG-G--GIF 318 (552)
Q Consensus 246 ~~l~~H~~~V~~l~~s--~~~l~s~s~-dg~I~iwd~~~~~~-~~~~~~h~~~v~~v~~~~~~~~~l~s~~~d-g--~i~ 318 (552)
..+..+...+ +++|+ ++++++++. ++.|.+||..+++. ...+..+..+..+++|+|++..++ ++..+ + .|.
T Consensus 34 ~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~-~~~~~~~~~~i~ 111 (331)
T 3u4y_A 34 NQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMADVDITPDDQFAV-TVTGLNHPFNMQ 111 (331)
T ss_dssp EEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCCEEECTTSSEEE-ECCCSSSSCEEE
T ss_pred eeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCccceEECCCCCEEE-EecCCCCcccEE
Confidence 3344556666 99998 776666655 89999999999987 777777777766699999877554 55444 3 899
Q ss_pred EEeCCCCCCCccccccccCCCceeeeEEEEeeCCCEE-EEeeCCCc-EEEEECCCCcee----EEecCCCCCeEEEEEe-
Q 008820 319 VWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYL-YTGSGDRT-IKAWSLLDGTLS----CTMSGHKSAVSTLAVC- 391 (552)
Q Consensus 319 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~sgs~dg~-i~iwd~~~~~~~----~~~~~h~~~v~~l~~~- 391 (552)
+||+.+++....+ ..... ....+++|+++++ ++...++. |.+|++.....+ ...........+++|+
T Consensus 112 v~d~~~~~~~~~~---~~~~~---~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~sp 185 (331)
T 3u4y_A 112 SYSFLKNKFISTI---PIPYD---AVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTP 185 (331)
T ss_dssp EEETTTTEEEEEE---ECCTT---EEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECT
T ss_pred EEECCCCCeEEEE---ECCCC---ccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECC
Confidence 9999876443322 22211 1345789999854 45566688 999998754332 1222344567899999
Q ss_pred CC-EE-EEEeCCCcEEEEECCCCce---eEEEecCCCCceEEEEEEcCCCCEEEEEE-CCCcEEEEeCCcc----eeeee
Q 008820 392 NG-VL-YSGSRDGTIRLWSLSDHSL---LTVLEEDSSGAVSSVLSLTAVQHTLVVSH-ESGSIKVWRNDKF----MKSMQ 461 (552)
Q Consensus 392 ~~-~l-~s~~~dg~i~iwd~~~~~~---~~~~~~~~~~~~~~~~~~s~~~~~l~~g~-~dg~i~iwd~~~~----~~~~~ 461 (552)
++ ++ +++..++.|++||+.+++. +..+... ..... ++++|+|+++++++ .++.|.+||..+. +..+.
T Consensus 186 dg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~--~~~~~-~~~spdg~~l~v~~~~~~~i~~~d~~~~~~~~~~~~~ 262 (331)
T 3u4y_A 186 DGNFAFVANLIGNSIGILETQNPENITLLNAVGTN--NLPGT-IVVSRDGSTVYVLTESTVDVFNFNQLSGTLSFVKSFG 262 (331)
T ss_dssp TSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECS--SCCCC-EEECTTSSEEEEECSSEEEEEEEETTTTEEEEEEEEE
T ss_pred CCCEEEEEeCCCCeEEEEECCCCcccceeeeccCC--CCCce-EEECCCCCEEEEEEcCCCEEEEEECCCCceeeecccc
Confidence 44 45 4455689999999999988 7776643 22333 68999999777665 4788999996532 22222
Q ss_pred cc----cceE-----EEEEecCCEEEEEeC-CCeEEEEecCCCee
Q 008820 462 TH----KGSV-----FAVFLEGKWLFTGGW-DKTVSVQELAGDEF 496 (552)
Q Consensus 462 ~h----~~~v-----~~v~~~~~~l~sgs~-dg~i~iwd~~~~~~ 496 (552)
.+ .... .++++++++|++++. ++.|.+||+.+...
T Consensus 263 ~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~ 307 (331)
T 3u4y_A 263 HGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTISGKVV 307 (331)
T ss_dssp CCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSCEE
T ss_pred cccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEecCCcc
Confidence 11 1111 355669998866554 67999999987644
No 155
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=99.75 E-value=1.7e-19 Score=170.71 Aligned_cols=106 Identities=14% Similarity=0.115 Sum_probs=73.6
Q ss_pred hhhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cc
Q 008820 13 VAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QF 89 (552)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf 89 (552)
..|+. |+|+.+.+.+.. ...++|||.|||||++ .+ ..+++++|||||||+||||+||+ ||
T Consensus 164 ~vKl~DFGla~~~~~~~~~--~~~~~GT~~YmAPE~~------~~---------~~y~~~~DiwSlGvilyemltG~~PF 226 (304)
T 3ubd_A 164 HIKLTDFGLSKESIDHEKK--AYSFCGTVEYMAPEVV------NR---------RGHTQSADWWSFGVLMFEMLTGTLPF 226 (304)
T ss_dssp CEEEESSEEEEC-----CC--CCSCCCCGGGCCHHHH------HT---------SCCCTHHHHHHHHHHHHHHHHSSCSS
T ss_pred CEEecccccceeccCCCcc--ccccccCcccCCHHHh------cc---------CCCCCCCcccchHHHHHHHHhCCCCC
Confidence 35666 888776555432 6678999999999999 22 45778999999999999999999 99
Q ss_pred hHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchh
Q 008820 90 TKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLT 156 (552)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~ 156 (552)
.+.+...+. ..+.......+...++++.+++.+||+++|.+||++.
T Consensus 227 ~~~~~~~~~---------------------~~i~~~~~~~p~~~s~~~~~li~~~L~~dP~~R~ta~ 272 (304)
T 3ubd_A 227 QGKDRKETM---------------------TMILKAKLGMPQFLSPEAQSLLRMLFKRNPANRLGAG 272 (304)
T ss_dssp CCSSHHHHH---------------------HHHHHCCCCCCTTSCHHHHHHHHHHTCSSGGGSTTCS
T ss_pred CCcCHHHHH---------------------HHHHcCCCCCCCcCCHHHHHHHHHHcccCHHHCCCCC
Confidence 775544221 1111111112223455699999999999999999964
No 156
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=99.74 E-value=3.3e-19 Score=169.92 Aligned_cols=120 Identities=15% Similarity=0.182 Sum_probs=88.1
Q ss_pred hhhhhhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhh-C
Q 008820 10 TKSVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-G 86 (552)
Q Consensus 10 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~llt-g 86 (552)
+.-.+|++ |+|+.+...+.....+...||+.|||||++. .+.++.+||||||||+||||+| |
T Consensus 180 ~~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~---------------~~~~s~ksDVwSfGvvl~El~t~g 244 (308)
T 4gt4_A 180 DKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIM---------------YGKFSIDSDIWSYGVVLWEVFSYG 244 (308)
T ss_dssp GGGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHH---------------HCCCCHHHHHHHHHHHHHHHHTTT
T ss_pred CCCCEEECCcccceeccCCCceeEecccccCCcccCHHHHh---------------CCCCCccchhhhHHHHHHHHHhCC
Confidence 34568888 8888887766555577889999999999992 3567899999999999999999 8
Q ss_pred C-CchHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHH-HhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHHh
Q 008820 87 E-QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYL-LENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRE 164 (552)
Q Consensus 87 ~-pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~~ 164 (552)
+ ||.+.+...+. ..+... ..+.+...+.++.+++.+|++.+|.+||++.++.+.|+.
T Consensus 245 ~~Pf~~~~~~~~~---------------------~~i~~~~~~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a 303 (308)
T 4gt4_A 245 LQPYCGYSNQDVV---------------------EMIRNRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRA 303 (308)
T ss_dssp CCTTTTCCHHHHH---------------------HHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred CCCCCCCCHHHHH---------------------HHHHcCCCCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHh
Confidence 9 99764433221 100000 001112234458999999999999999999999888765
Q ss_pred h
Q 008820 165 L 165 (552)
Q Consensus 165 ~ 165 (552)
+
T Consensus 304 ~ 304 (308)
T 4gt4_A 304 W 304 (308)
T ss_dssp S
T ss_pred c
Confidence 3
No 157
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.74 E-value=3.6e-15 Score=146.28 Aligned_cols=222 Identities=15% Similarity=0.155 Sum_probs=161.9
Q ss_pred cceEEEEEc--CCE-EEEEeCCCcEEEEeCCCCeEEEEEeCCCCC---------eEEEEEecCCCCEEEEE-cCCCcEEE
Q 008820 253 DCVTGLAVG--GGF-LFSSSFDKSIHVWSLKDFSHVHTFKGHDHK---------VMAVVYVDEDQPLCISG-DSGGGIFV 319 (552)
Q Consensus 253 ~~V~~l~~s--~~~-l~s~s~dg~I~iwd~~~~~~~~~~~~h~~~---------v~~v~~~~~~~~~l~s~-~~dg~i~v 319 (552)
..+.+++|+ +++ +++...++.|.+||..+++.+..+..+... +.+++|+|+++.+++++ +.++.|.+
T Consensus 89 ~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~ 168 (353)
T 3vgz_A 89 LKPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWV 168 (353)
T ss_dssp SCCCSEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEE
T ss_pred CCcceEEECCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEE
Confidence 346678887 664 455566899999999999998888765432 78999999888666666 46889999
Q ss_pred EeCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCceeEEecC----CCCCeEEEEEe--CC
Q 008820 320 WSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSG----HKSAVSTLAVC--NG 393 (552)
Q Consensus 320 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~----h~~~v~~l~~~--~~ 393 (552)
||..+.+....+..... . ....+++++++.+++++.++.|.+||..+++....+.. +...+.+++|+ ++
T Consensus 169 ~d~~~~~~~~~~~~~~~----~-~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~ 243 (353)
T 3vgz_A 169 VDGGNIKLKTAIQNTGK----M-STGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQ 243 (353)
T ss_dssp EETTTTEEEEEECCCCT----T-CCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTT
T ss_pred EcCCCCceEEEecCCCC----c-cceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCC
Confidence 99987654333321111 0 12247899999999999999999999999998887754 55668889999 34
Q ss_pred EEEEEe-CCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEE-CCCcEEEEeCCc--ceeeeecccceEEE
Q 008820 394 VLYSGS-RDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSH-ESGSIKVWRNDK--FMKSMQTHKGSVFA 469 (552)
Q Consensus 394 ~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~-~dg~i~iwd~~~--~~~~~~~h~~~v~~ 469 (552)
.+++++ .++.|.+||+.+++.+..+..... .. ++++|+++++++++ .++.|.+||..+ .+..+..+ ..+.+
T Consensus 244 ~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~---~~-~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~ 318 (353)
T 3vgz_A 244 RAFITDSKAAEVLVVDTRNGNILAKVAAPES---LA-VLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDTP-THPNS 318 (353)
T ss_dssp EEEEEESSSSEEEEEETTTCCEEEEEECSSC---CC-EEEETTTTEEEEEETTTTEEEEEETTTTEEEEEEECC-SEEEE
T ss_pred EEEEEeCCCCEEEEEECCCCcEEEEEEcCCC---ce-EEECCCCCEEEEEECCCCeEEEEECCCCeEEEEEecC-CCCCe
Confidence 555555 459999999999998888876432 22 68999999766665 689999999653 44444443 34566
Q ss_pred EEe--cCCEEEEEeCCC
Q 008820 470 VFL--EGKWLFTGGWDK 484 (552)
Q Consensus 470 v~~--~~~~l~sgs~dg 484 (552)
+.+ +|++|+.+..++
T Consensus 319 ~~~s~dg~~l~v~~~~~ 335 (353)
T 3vgz_A 319 LALSADGKTLYVSVKQK 335 (353)
T ss_dssp EEECTTSCEEEEEEECC
T ss_pred EEEcCCCCEEEEEEccc
Confidence 665 888777766554
No 158
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.74 E-value=1e-16 Score=172.99 Aligned_cols=266 Identities=9% Similarity=0.053 Sum_probs=169.2
Q ss_pred eEEEEEcCCEEEEEeCCCcEEEEeCCCCeEE-EEEeCCC-----------------CCeEEEEEecCCCCEEEEEcCCCc
Q 008820 255 VTGLAVGGGFLFSSSFDKSIHVWSLKDFSHV-HTFKGHD-----------------HKVMAVVYVDEDQPLCISGDSGGG 316 (552)
Q Consensus 255 V~~l~~s~~~l~s~s~dg~I~iwd~~~~~~~-~~~~~h~-----------------~~v~~v~~~~~~~~~l~s~~~dg~ 316 (552)
+..+.|.++.+++++.|+ | +||+.+++.+ ..+..|. ..|.+++|+|+ +.++++ .++.
T Consensus 28 ~~~~~w~g~~~~~~~~~~-i-~~d~~tg~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd-~~~~~~--~~~~ 102 (706)
T 2z3z_A 28 VVGLQWMGDNYVFIEGDD-L-VFNKANGKSAQTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDAGR-GLVVLF--TQGG 102 (706)
T ss_dssp CTTCEEETTEEEEEETTE-E-EEEC-------CEEEEHHHHHTTC-----------CCCEEEEETTT-TEEEEE--ETTE
T ss_pred CCCCcCcCCeEEEEeCCc-E-EEECCCCcEeeEEeechhHhhhhccchhccccccccCceeEEECCC-CeEEEE--ECCE
Confidence 344556577888888888 8 9999999873 4444333 56999999998 655555 3599
Q ss_pred EEEEeCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCC-----CceeEEecCCCCC-------
Q 008820 317 IFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLD-----GTLSCTMSGHKSA------- 384 (552)
Q Consensus 317 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~-----~~~~~~~~~h~~~------- 384 (552)
|++||+.++....... ... . ....+++|+|+.|+++ .|+.|++||+.+ ++.......+...
T Consensus 103 i~~~d~~~~~~~~l~~----~~~-~-~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~ 175 (706)
T 2z3z_A 103 LVGFDMLARKVTYLFD----TNE-E-TASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAV 175 (706)
T ss_dssp EEEEETTTTEEEEEEC----CTT-C-CTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCC
T ss_pred EEEEECCCCceEEccC----Ccc-c-ccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccch
Confidence 9999998653322111 110 1 1124789999998885 679999999998 7776544444333
Q ss_pred -------eEEEEEe-CC-EEEEEe---------------------------------CCCcEEEEECCCCceeEEEecCC
Q 008820 385 -------VSTLAVC-NG-VLYSGS---------------------------------RDGTIRLWSLSDHSLLTVLEEDS 422 (552)
Q Consensus 385 -------v~~l~~~-~~-~l~s~~---------------------------------~dg~i~iwd~~~~~~~~~~~~~~ 422 (552)
+.++.|+ ++ .|++++ .+..|++||+.+++.........
T Consensus 176 ~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~ 255 (706)
T 2z3z_A 176 HQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEP 255 (706)
T ss_dssp GGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSC
T ss_pred hhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCC
Confidence 4789999 44 788877 45789999999887654443211
Q ss_pred CCceEEEEEEcCCCCEEEEEECCC-----cEEEEeCCcc--eeeee--cccceE-----EEEEe--cCCEEEEEeCCCeE
Q 008820 423 SGAVSSVLSLTAVQHTLVVSHESG-----SIKVWRNDKF--MKSMQ--THKGSV-----FAVFL--EGKWLFTGGWDKTV 486 (552)
Q Consensus 423 ~~~~~~~~~~s~~~~~l~~g~~dg-----~i~iwd~~~~--~~~~~--~h~~~v-----~~v~~--~~~~l~sgs~dg~i 486 (552)
.......++|+|||+.|++++.++ .|++||..+. ...+. .+...+ ..+++ ||+++++++.|+.+
T Consensus 256 ~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~ 335 (706)
T 2z3z_A 256 KEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWN 335 (706)
T ss_dssp TTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSC
T ss_pred CceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCcc
Confidence 222334479999999999988775 8999996543 23322 122211 25566 89999999999999
Q ss_pred EEEecC-CCeeeeeeccCCCcccCcceEE-EEEeCC--eEEEEe-CCC--eEEEEEec
Q 008820 487 SVQELA-GDEFEEDVIPTGAIPCGSVITA-LLYWQG--KLFVGC-ADR--TVKIALCN 537 (552)
Q Consensus 487 ~iwd~~-~~~~~~~~~~~~~~~~~~~v~~-l~~~~~--~l~s~s-~Dg--~v~iw~~~ 537 (552)
++|++. ++.....+... ...+.. ++|+++ .|+.++ .++ .++||.++
T Consensus 336 ~l~~~~~~~~~~~~l~~~-----~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d 388 (706)
T 2z3z_A 336 HLYLYDTTGRLIRQVTKG-----EWEVTNFAGFDPKGTRLYFESTEASPLERHFYCID 388 (706)
T ss_dssp EEEEEETTSCEEEECCCS-----SSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEE
T ss_pred EEEEEECCCCEEEecCCC-----CeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEE
Confidence 999876 33333333221 344655 789853 455544 444 34454443
No 159
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.74 E-value=6e-17 Score=175.35 Aligned_cols=274 Identities=9% Similarity=0.045 Sum_probs=180.2
Q ss_pred eEEEEEc--CCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCC---CeEEEEEecCCCCEEEEEcCC---------CcEEEE
Q 008820 255 VTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDH---KVMAVVYVDEDQPLCISGDSG---------GGIFVW 320 (552)
Q Consensus 255 V~~l~~s--~~~l~s~s~dg~I~iwd~~~~~~~~~~~~h~~---~v~~v~~~~~~~~~l~s~~~d---------g~i~vw 320 (552)
+.+++|+ |+++++ +.||+|++||+.+++....+.+|.. .|.+++|+|++.. +++++.+ +.+.+|
T Consensus 19 ~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~-l~~~~~~~~~~~~~~~~~i~~~ 96 (723)
T 1xfd_A 19 DPEAKWISDTEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREY-ALFSYNVEPIYQHSYTGYYVLS 96 (723)
T ss_dssp CCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSE-EEEEESCCCCSSSCCCSEEEEE
T ss_pred ccccEEcCCCcEEEE-eCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCE-EEEEecCccceeecceeeEEEE
Confidence 5667888 676655 7899999999999998888887765 4999999998774 4555543 788999
Q ss_pred eCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCe---------------
Q 008820 321 SFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAV--------------- 385 (552)
Q Consensus 321 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v--------------- 385 (552)
|+.++.. ..+.....+. ......+++|+|+.|++++. +.|++||+.+++.......+...+
T Consensus 97 d~~~~~~-~~l~~~~~~~--~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~ 172 (723)
T 1xfd_A 97 KIPHGDP-QSLDPPEVSN--AKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEIL 172 (723)
T ss_dssp ESSSCCC-EECCCTTCCS--CCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTS
T ss_pred ECCCCce-EeccCCcccc--ccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEec
Confidence 9987654 2222211111 01123478999999998886 789999999988876665544433
Q ss_pred ---EEEEEe-CC-EEEEEeCCC----------------------------------cEEEEECCCCceeEEEecCC----
Q 008820 386 ---STLAVC-NG-VLYSGSRDG----------------------------------TIRLWSLSDHSLLTVLEEDS---- 422 (552)
Q Consensus 386 ---~~l~~~-~~-~l~s~~~dg----------------------------------~i~iwd~~~~~~~~~~~~~~---- 422 (552)
.+++|+ ++ .|++++.|+ .|++||+.+++....+..+.
T Consensus 173 ~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~ 252 (723)
T 1xfd_A 173 KTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRM 252 (723)
T ss_dssp SSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGG
T ss_pred cCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCC
Confidence 789999 44 788777553 79999999888655555331
Q ss_pred CCceEEEEEEcCCCCEEEEEEC----CCcEEEEeCCc--ceeeeec-ccceE------EEEEecCCEEEE--EeCCC---
Q 008820 423 SGAVSSVLSLTAVQHTLVVSHE----SGSIKVWRNDK--FMKSMQT-HKGSV------FAVFLEGKWLFT--GGWDK--- 484 (552)
Q Consensus 423 ~~~~~~~~~~s~~~~~l~~g~~----dg~i~iwd~~~--~~~~~~~-h~~~v------~~v~~~~~~l~s--gs~dg--- 484 (552)
.......+.|+|||+++++... +..|++||... ....+.. +...+ ..+++||+.|+. +..++
T Consensus 253 ~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~ 332 (723)
T 1xfd_A 253 REYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRG 332 (723)
T ss_dssp SSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSS
T ss_pred ccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCc
Confidence 0222334699999998877653 35799999653 3333333 23332 234558887664 45677
Q ss_pred ---eEEEEe-cCCCee--eeeeccCCCcccCcceE-EEEEeCC--eEEEEeCC---CeEEEEEecCC
Q 008820 485 ---TVSVQE-LAGDEF--EEDVIPTGAIPCGSVIT-ALLYWQG--KLFVGCAD---RTVKIALCNRQ 539 (552)
Q Consensus 485 ---~i~iwd-~~~~~~--~~~~~~~~~~~~~~~v~-~l~~~~~--~l~s~s~D---g~v~iw~~~~~ 539 (552)
.|++|| ..++.. ...+... ...+. .++|+++ .|+..+.+ +.+++|+++..
T Consensus 333 ~~~~l~~~d~~~~~~~~~~~~l~~~-----~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~~~ 394 (723)
T 1xfd_A 333 KFYHITVSSSQPNSSNDNIQSITSG-----DWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANTV 394 (723)
T ss_dssp CEEEEEEECSSCCSSSCCCCBSCCS-----SSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEECSS
T ss_pred ceeEEEEEeccCCCCccceeEeecC-----CeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEeCC
Confidence 577777 344430 2222211 22233 4688853 46655544 88999999743
No 160
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.74 E-value=4.3e-15 Score=145.61 Aligned_cols=263 Identities=13% Similarity=0.141 Sum_probs=162.0
Q ss_pred CCcEEEEeC--CCCeEEE-EEeCCCCCeEEEEEecCCCCEEEEEcC--CCcEEEEeCCCCCCCccccccccCCCceeeeE
Q 008820 271 DKSIHVWSL--KDFSHVH-TFKGHDHKVMAVVYVDEDQPLCISGDS--GGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGI 345 (552)
Q Consensus 271 dg~I~iwd~--~~~~~~~-~~~~h~~~v~~v~~~~~~~~~l~s~~~--dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~ 345 (552)
++.|.+|++ .+++... ....+...+..++|+|++. +++++.. ++.|.+|++..+.. ..+....... .....
T Consensus 15 ~~~i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~-~~~~~~~~~~--~~p~~ 90 (347)
T 3hfq_A 15 SQGIYQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTA-HKLNTVVAPG--TPPAY 90 (347)
T ss_dssp CCEEEEEEEETTTTEEEEEEEEEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEE-EEEEEEEEES--CCCSE
T ss_pred CCCEEEEEEcCCCCeEEEeeeeeccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcE-EEeeeeecCC--CCCEE
Confidence 456777765 4565533 2334556778899999877 5555543 79999999965432 1222111111 11123
Q ss_pred EEEeeCCCEEEEee-CCCcEEEEECC-CCc--eeEEecC---------CCCCeEEEEEe-CC-EEEEEeCCCcEEEEECC
Q 008820 346 HALTTSGRYLYTGS-GDRTIKAWSLL-DGT--LSCTMSG---------HKSAVSTLAVC-NG-VLYSGSRDGTIRLWSLS 410 (552)
Q Consensus 346 ~~~~~~~~~l~sgs-~dg~i~iwd~~-~~~--~~~~~~~---------h~~~v~~l~~~-~~-~l~s~~~dg~i~iwd~~ 410 (552)
.++++++++|++++ .++.|.+||+. ++. .+..+.. +...+.+++|+ ++ ++++...++.|++||+.
T Consensus 91 ~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~ 170 (347)
T 3hfq_A 91 VAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVS 170 (347)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEEC
T ss_pred EEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEEC
Confidence 57899999888877 78999999996 332 3333321 12348889999 33 56666678899999998
Q ss_pred -CCceeE--EEecCCCCceEEEEEEcCCCCEEEE-EECCCcEEEEeCCc---c---eeeeeccc------ceEEEEEe--
Q 008820 411 -DHSLLT--VLEEDSSGAVSSVLSLTAVQHTLVV-SHESGSIKVWRNDK---F---MKSMQTHK------GSVFAVFL-- 472 (552)
Q Consensus 411 -~~~~~~--~~~~~~~~~~~~~~~~s~~~~~l~~-g~~dg~i~iwd~~~---~---~~~~~~h~------~~v~~v~~-- 472 (552)
+++... .+.......... ++|+|+|+++++ +..++.|.+|+... . ...+.... ..+..+.+
T Consensus 171 ~~g~~~~~~~~~~~~g~~p~~-~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~sp 249 (347)
T 3hfq_A 171 DAGQLSEQSVLTMEAGFGPRH-LVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSH 249 (347)
T ss_dssp TTSCEEEEEEEECCTTCCEEE-EEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECT
T ss_pred CCCcEEEeeeEEcCCCCCCce-EEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECC
Confidence 554332 222222223333 799999996666 45688999998542 1 22222221 34555555
Q ss_pred cCCEE-EEEeCCCeEEEEecCCC-ee--eeeeccCCCcccCcceEEEEEeC-C-eEEEEeC-CCeEEEEEecCCccee
Q 008820 473 EGKWL-FTGGWDKTVSVQELAGD-EF--EEDVIPTGAIPCGSVITALLYWQ-G-KLFVGCA-DRTVKIALCNRQIPEI 543 (552)
Q Consensus 473 ~~~~l-~sgs~dg~i~iwd~~~~-~~--~~~~~~~~~~~~~~~v~~l~~~~-~-~l~s~s~-Dg~v~iw~~~~~~~~~ 543 (552)
||++| ++...++.|.+|++... .. ....... ...+..++|++ + .|++++. ++.|.+|+++.....+
T Consensus 250 dG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~-----~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~l 322 (347)
T 3hfq_A 250 DGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTE-----GDFPRDFDLDPTEAFVVVVNQNTDNATLYARDLTSGKL 322 (347)
T ss_dssp TSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECS-----SSCCCEEEECTTSSEEEEEETTTTEEEEEEECTTTCCE
T ss_pred CCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecC-----CCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeCCCCeE
Confidence 89877 55667899999999732 22 2221111 33467899995 3 4777765 5999999887543333
No 161
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=99.74 E-value=2.9e-19 Score=173.42 Aligned_cols=121 Identities=17% Similarity=0.250 Sum_probs=88.4
Q ss_pred hhhhhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhh-CC
Q 008820 11 KSVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE 87 (552)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~llt-g~ 87 (552)
.-.+|++ |+|+.+.........+...||+.|||||++. ...++.+||||||||+||||+| |+
T Consensus 221 ~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~---------------~~~y~~ksDVwS~Gv~l~El~t~G~ 285 (353)
T 4ase_A 221 KNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIF---------------DRVYTIQSDVWSFGVLLWEIFSLGA 285 (353)
T ss_dssp GGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHH---------------HCCCCHHHHHHHHHHHHHHHTTTSC
T ss_pred CCCEEECcchhhhhcccCCCceeeccccccccccCHHHHh---------------cCCCCCcccEeehHHHHHHHHhCCC
Confidence 4578888 8998876655444467889999999999992 2567899999999999999998 89
Q ss_pred -CchHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHH-hhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHHhh
Q 008820 88 -QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLL-ENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIREL 165 (552)
Q Consensus 88 -pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~~~ 165 (552)
||.+...... ....+..-. ...+....+++.+++.+|++.+|.+||++.++.+.+..+
T Consensus 286 ~Pf~~~~~~~~--------------------~~~~i~~g~~~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~l 345 (353)
T 4ase_A 286 SPYPGVKIDEE--------------------FCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 345 (353)
T ss_dssp CSSTTCCCSHH--------------------HHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CCCCCCCHHHH--------------------HHHHHHcCCCCCCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHH
Confidence 9976432210 001110000 111223455699999999999999999999999988877
Q ss_pred h
Q 008820 166 I 166 (552)
Q Consensus 166 ~ 166 (552)
+
T Consensus 346 l 346 (353)
T 4ase_A 346 L 346 (353)
T ss_dssp H
T ss_pred H
Confidence 6
No 162
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.74 E-value=1.1e-15 Score=154.24 Aligned_cols=199 Identities=13% Similarity=0.104 Sum_probs=140.0
Q ss_pred ccceEEEEEc--CCEEEEEeCCCcEEEEeCCCC-----------eEE-----EEEeCCCCCeEEEEEecCCCCEEE---E
Q 008820 252 RDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDF-----------SHV-----HTFKGHDHKVMAVVYVDEDQPLCI---S 310 (552)
Q Consensus 252 ~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~-----------~~~-----~~~~~h~~~v~~v~~~~~~~~~l~---s 310 (552)
...++.++++ +.++++++.|+ +++|+.... ... .. ..+...|.+++|+|++..+++ +
T Consensus 36 ~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~l~~spdg~~lav~~~s 113 (434)
T 2oit_A 36 KERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLL-VPMKFPIHHLALSCDNLTLSACMMS 113 (434)
T ss_dssp CSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEE-ECCSSCEEEEEECTTSCEEEEEEEE
T ss_pred CCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCcccc-ccCCCcccEEEEcCCCCEEEEEEec
Confidence 4457888888 88899999887 889874310 111 11 236678999999998775544 7
Q ss_pred EcCCCcEEEEeCCCC-----CCCcc---ccccccCCCceeeeEEEEeeC-CCEEEEeeCCCcEEEEECCCCceeEEecCC
Q 008820 311 GDSGGGIFVWSFSFP-----LGHEP---LKKWNEEKDWRYSGIHALTTS-GRYLYTGSGDRTIKAWSLLDGTLSCTMSGH 381 (552)
Q Consensus 311 ~~~dg~i~vwd~~~~-----~~~~~---~~~~~~~~~~~~~~~~~~~~~-~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h 381 (552)
++.|+.|++||+.+. ..... +.....+.. .....+|+|+ +++|++++.||+|++||++++..+....+|
T Consensus 114 gs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~--~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~~~ 191 (434)
T 2oit_A 114 SEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGG--MVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLPS 191 (434)
T ss_dssp TTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGG--SEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEECG
T ss_pred cCCCceEEEEEccccccCCcCCcceeeeeeccCCCCC--ceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeeccCC
Confidence 889999999998754 11111 222222221 1223467776 679999999999999999999877777789
Q ss_pred CCCeEEEEEe--CCEEEEEeCCCcEEEEECCCCceeEEEecCCC-----CceEEEEEEcCCCCEEEEE-ECCCc------
Q 008820 382 KSAVSTLAVC--NGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSS-----GAVSSVLSLTAVQHTLVVS-HESGS------ 447 (552)
Q Consensus 382 ~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~-----~~~~~~~~~s~~~~~l~~g-~~dg~------ 447 (552)
...|++++|+ +.+|++|+.||+|++||++ ++....+..+.. ......+.|++++.++++. ..+|.
T Consensus 192 ~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~ 270 (434)
T 2oit_A 192 TVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPD 270 (434)
T ss_dssp GGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCE
T ss_pred CCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCc
Confidence 9999999999 4499999999999999998 666665544321 1123336888887776543 34433
Q ss_pred EEEEeCCc
Q 008820 448 IKVWRNDK 455 (552)
Q Consensus 448 i~iwd~~~ 455 (552)
+++|++++
T Consensus 271 v~i~~l~~ 278 (434)
T 2oit_A 271 VVMALLPK 278 (434)
T ss_dssp EEEEECCC
T ss_pred eEEEEecc
Confidence 88999653
No 163
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.74 E-value=3.7e-16 Score=175.89 Aligned_cols=275 Identities=10% Similarity=0.059 Sum_probs=197.4
Q ss_pred EEEeecCccceEEEEEc-CCEEEEEeCCCcEEEEeCCC-CeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeC
Q 008820 245 FKDLQGHRDCVTGLAVG-GGFLFSSSFDKSIHVWSLKD-FSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSF 322 (552)
Q Consensus 245 ~~~l~~H~~~V~~l~~s-~~~l~s~s~dg~I~iwd~~~-~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~ 322 (552)
...+.+|.+.+.++.|+ ..++++++.|++++||.+.. +.....+..|. .+...+|+|++..+++ + .++.|.+||+
T Consensus 196 ~~~l~~~~~~v~~~~~s~d~l~~~~~~dg~~~l~~~~~~g~~~~~l~~~~-~~~~~~~SpDG~~la~-~-~~~~i~~~d~ 272 (1045)
T 1k32_A 196 FKKIVDMSTHVSSPVIVGHRIYFITDIDGFGQIYSTDLDGKDLRKHTSFT-DYYPRHLNTDGRRILF-S-KGGSIYIFNP 272 (1045)
T ss_dssp EEEEECCSSCCEEEEEETTEEEEEECTTSSCEEEEEETTSCSCEECCCCC-SSCEEEEEESSSCEEE-E-ETTEEEEECT
T ss_pred eEECcCCCCcccceEEeCCEEEEEEeccCceEEEEEeCCCCcceEecCCC-CcceeeEcCCCCEEEE-E-eCCEEEEecC
Confidence 34458999999999999 55666778889999998653 44455566565 4667799998876544 4 4899999998
Q ss_pred CCCCCCccccccccCC---C------ceeeeEEEEe-eCCCEEEEeeCCCcEEEEECCCCceeEEecCCCC-CeEEEEEe
Q 008820 323 SFPLGHEPLKKWNEEK---D------WRYSGIHALT-TSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKS-AVSTLAVC 391 (552)
Q Consensus 323 ~~~~~~~~~~~~~~~~---~------~~~~~~~~~~-~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~-~v~~l~~~ 391 (552)
.... +..+.... . .......+++ |+|+.+++++ ++.|.+|++.+++.. .+..|.. .+.+++|+
T Consensus 273 ~~~~----l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~s 346 (1045)
T 1k32_A 273 DTEK----IEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVL-KVPEPLRIRYVRRGGD 346 (1045)
T ss_dssp TTCC----EEECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBEE-ECSCCSCEEEEEECSS
T ss_pred CceE----eeeeccCcccccccccccccccceeeecCCCCCEEEEEE-cCEEEEEcCCCCceE-EccCCCcceEEeeeEc
Confidence 4321 11211110 0 0012345889 9999888887 789999999877654 4666777 88999998
Q ss_pred CC-EEEEEeCCCcEE-EEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEECCCcEEEEeCCc--ceeeeecccceE
Q 008820 392 NG-VLYSGSRDGTIR-LWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDK--FMKSMQTHKGSV 467 (552)
Q Consensus 392 ~~-~l~s~~~dg~i~-iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~~--~~~~~~~h~~~v 467 (552)
++ .+++++.++.+. +||+.+++... +. .+...+.. ++|+|+|++|++++.++.|++||+.. ......+|...+
T Consensus 347 dg~~l~~~s~~~~l~~~~d~~~~~~~~-l~-~~~~~~~~-~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v 423 (1045)
T 1k32_A 347 TKVAFIHGTREGDFLGIYDYRTGKAEK-FE-ENLGNVFA-MGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMI 423 (1045)
T ss_dssp SEEEEEEEETTEEEEEEEETTTCCEEE-CC-CCCCSEEE-EEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCC
T ss_pred CCCeEEEEECCCceEEEEECCCCCceE-ec-CCccceee-eEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCc
Confidence 32 788888888898 99998776543 33 33344444 79999999999999999999999653 444555788877
Q ss_pred EEEEe--cCCEEEEEeCCC----------eEEEEecCCCeeeeeeccCCCcccCcceEEEEEeC-C-eEEEEeCCCeEEE
Q 008820 468 FAVFL--EGKWLFTGGWDK----------TVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQ-G-KLFVGCADRTVKI 533 (552)
Q Consensus 468 ~~v~~--~~~~l~sgs~dg----------~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~~-~-~l~s~s~Dg~v~i 533 (552)
.++.| ||++|++++.++ .|++||+.+++.... .. +...+..++|++ + .|++++.++...+
T Consensus 424 ~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~~~~l-~~-----~~~~~~~~~~spdG~~l~~~s~~~~~~~ 497 (1045)
T 1k32_A 424 TDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAA-TT-----ENSHDYAPAFDADSKNLYYLSYRSLDPS 497 (1045)
T ss_dssp CCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEEEEC-SC-----SSSBEEEEEECTTSCEEEEEESCCCCCE
T ss_pred cceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCcEEEe-eC-----CCcccCCceEcCCCCEEEEEecccCCcC
Confidence 76665 999999887654 899999998763322 22 144577889995 3 4888998888888
Q ss_pred EEec
Q 008820 534 ALCN 537 (552)
Q Consensus 534 w~~~ 537 (552)
|+..
T Consensus 498 ~~~~ 501 (1045)
T 1k32_A 498 PDRV 501 (1045)
T ss_dssp ECSS
T ss_pred cchh
Confidence 8743
No 164
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.73 E-value=3.6e-16 Score=148.95 Aligned_cols=229 Identities=13% Similarity=0.119 Sum_probs=160.5
Q ss_pred EeecCccceEEEEEc--CCEEEEEeCCCcEEEEeCCC-CeEEEEEeCC-CCCeEEEEEecCCCCEEEEEc--CCCcEEEE
Q 008820 247 DLQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKD-FSHVHTFKGH-DHKVMAVVYVDEDQPLCISGD--SGGGIFVW 320 (552)
Q Consensus 247 ~l~~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~-~~~~~~~~~h-~~~v~~v~~~~~~~~~l~s~~--~dg~i~vw 320 (552)
.+..|...|.+++|+ +++|++++ ++.|++||+.+ ++.......| ...+.+++|+|++. .+++++ .++...+|
T Consensus 36 ~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~-~l~~~~~~~~~~~~l~ 113 (297)
T 2ojh_A 36 VVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGA-LYAISDKVEFGKSAIY 113 (297)
T ss_dssp EEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSS-EEEEEECTTTSSCEEE
T ss_pred eeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECCCCC-EEEEEEeCCCCcceEE
Confidence 466789999999999 88899887 78999999999 8877766666 36789999999876 455555 44566666
Q ss_pred eCCCCCCCccccccccCCCceeeeEEEEeeCCCEEE-EeeCCCcEEEEECC-CCceeEEecCCCCCeEEEEEe-CC-EEE
Q 008820 321 SFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLY-TGSGDRTIKAWSLL-DGTLSCTMSGHKSAVSTLAVC-NG-VLY 396 (552)
Q Consensus 321 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-sgs~dg~i~iwd~~-~~~~~~~~~~h~~~v~~l~~~-~~-~l~ 396 (552)
.++..... ...+..... ....+++++++.++ +++.++.+++|+++ .+.....+..+...+.+++|+ ++ .++
T Consensus 114 ~~~~~~~~--~~~~~~~~~---~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~ 188 (297)
T 2ojh_A 114 LLPSTGGT--PRLMTKNLP---SYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEGRNDGPDYSPDGRWIY 188 (297)
T ss_dssp EEETTCCC--CEECCSSSS---EEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSSCEEEEEECTTSSEEE
T ss_pred EEECCCCc--eEEeecCCC---ccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccCCCccccceECCCCCEEE
Confidence 65432211 112222211 23347899999766 78889999999864 233445667788899999999 33 566
Q ss_pred EEe-CCCcEEEEECC-CCceeEEEecCCCCceEEEEEEcCCCCEEEEEECC-----------CcEEEEeCCc--c--eee
Q 008820 397 SGS-RDGTIRLWSLS-DHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHES-----------GSIKVWRNDK--F--MKS 459 (552)
Q Consensus 397 s~~-~dg~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~d-----------g~i~iwd~~~--~--~~~ 459 (552)
.++ .++.+++|++. .+.....+..+ .. ....+.|+|++++|++++.+ +.|++||... . +..
T Consensus 189 ~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~-~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~ 266 (297)
T 2ojh_A 189 FNSSRTGQMQIWRVRVDGSSVERITDS-AY-GDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFD 266 (297)
T ss_dssp EEECTTSSCEEEEEETTSSCEEECCCC-SE-EEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEEE
T ss_pred EEecCCCCccEEEECCCCCCcEEEecC-Cc-ccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCceeeec
Confidence 555 69999999986 45555555443 22 33346899999999888765 5699999653 2 233
Q ss_pred eecccceEEEEEe--cCCEEEEEeCCC
Q 008820 460 MQTHKGSVFAVFL--EGKWLFTGGWDK 484 (552)
Q Consensus 460 ~~~h~~~v~~v~~--~~~~l~sgs~dg 484 (552)
+.+|...+.++.| ++++|++++.+.
T Consensus 267 ~~~~~~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 267 LFGGQGTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp EEESTTTSCSCCBCTTSSEEEEEEECC
T ss_pred cCCCCcccccceECCCCCEEEEEEecc
Confidence 4467777777666 899888887653
No 165
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.73 E-value=1.9e-14 Score=141.95 Aligned_cols=261 Identities=16% Similarity=0.144 Sum_probs=164.6
Q ss_pred CccceEEEEEc--CCEEEEEeCC----CcEEEEeCCC--Ce--EEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEE
Q 008820 251 HRDCVTGLAVG--GGFLFSSSFD----KSIHVWSLKD--FS--HVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVW 320 (552)
Q Consensus 251 H~~~V~~l~~s--~~~l~s~s~d----g~I~iwd~~~--~~--~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vw 320 (552)
|...+..++|+ +++|++++.+ +.|.+|++.. ++ .+.....+......+++ ++..++++...++.|.+|
T Consensus 48 ~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~ 125 (361)
T 3scy_A 48 EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSITVF 125 (361)
T ss_dssp ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEE
T ss_pred cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEE
Confidence 66777888998 8889999886 7999998865 44 33444556667778887 566566666678999999
Q ss_pred eCCCCCCCccccccccCCC---------ceeeeEEEEeeCCCEEEEee-CCCcEEEEECCCCc-------e------eEE
Q 008820 321 SFSFPLGHEPLKKWNEEKD---------WRYSGIHALTTSGRYLYTGS-GDRTIKAWSLLDGT-------L------SCT 377 (552)
Q Consensus 321 d~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~l~sgs-~dg~i~iwd~~~~~-------~------~~~ 377 (552)
++........+........ .......+++|+++++++++ .++.|.+|++.... . ...
T Consensus 126 ~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~ 205 (361)
T 3scy_A 126 PIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAF 205 (361)
T ss_dssp EBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEE
T ss_pred EeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccce
Confidence 9975443322211100000 01112358899999665544 58899999987543 1 112
Q ss_pred ecCCCCCeEEEEEe-CC-EEEEEe-CCCcEEEEECCCCce--eEEEecCCC-CceEEEEEEcCCCCEEEEEECC--CcEE
Q 008820 378 MSGHKSAVSTLAVC-NG-VLYSGS-RDGTIRLWSLSDHSL--LTVLEEDSS-GAVSSVLSLTAVQHTLVVSHES--GSIK 449 (552)
Q Consensus 378 ~~~h~~~v~~l~~~-~~-~l~s~~-~dg~i~iwd~~~~~~--~~~~~~~~~-~~~~~~~~~s~~~~~l~~g~~d--g~i~ 449 (552)
...+......++|+ ++ ++++++ .++.|.+||+.+++. +..+..... ......++|+|+|++|+++..+ +.|.
T Consensus 206 ~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~ 285 (361)
T 3scy_A 206 KVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVA 285 (361)
T ss_dssp ECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEE
T ss_pred ecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEE
Confidence 23345567899999 44 676666 689999999987754 233322111 1112347999999998777654 8999
Q ss_pred EEeCC----c--ceeeeecccceEEEEE--ecCCEEEEEe-CCCeEEEEec--CCCeeeeeeccCCCcccCcceEEEEEe
Q 008820 450 VWRND----K--FMKSMQTHKGSVFAVF--LEGKWLFTGG-WDKTVSVQEL--AGDEFEEDVIPTGAIPCGSVITALLYW 518 (552)
Q Consensus 450 iwd~~----~--~~~~~~~h~~~v~~v~--~~~~~l~sgs-~dg~i~iwd~--~~~~~~~~~~~~~~~~~~~~v~~l~~~ 518 (552)
+|++. + .+..+.. ...+..+. ++|++|++++ .++.|.+|++ .++++....... ....+.|+.|.
T Consensus 286 v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~----~~~~p~~v~~~ 360 (361)
T 3scy_A 286 IFKVDETNGTLTKVGYQLT-GIHPRNFIITPNGKYLLVACRDTNVIQIFERDQATGLLTDIKKDI----KVDKPVCLKFV 360 (361)
T ss_dssp EEEECTTTCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTCCEEECSCCE----ECSSEEEEEEE
T ss_pred EEEEcCCCCcEEEeeEecC-CCCCceEEECCCCCEEEEEECCCCCEEEEEEECCCCcEeecceee----eCCCCeEEEEc
Confidence 99864 2 2222222 23444454 5899888887 6789999655 455544332111 12347777775
No 166
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=99.72 E-value=9.7e-19 Score=172.40 Aligned_cols=113 Identities=14% Similarity=0.213 Sum_probs=79.5
Q ss_pred hhhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cc
Q 008820 13 VAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QF 89 (552)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf 89 (552)
..|+. |+|+.+..... ..+.++|||.|||||++ . ...+++++|||||||+||||++|+ ||
T Consensus 285 ~vKl~DFGla~~~~~~~~--~~~~~~GTp~YmAPEvl------~---------~~~y~~~~DiWSlGvilyeml~G~~PF 347 (423)
T 4fie_A 285 RVKLSDFGFCAQVSKEVP--RRKSLVGTPYWMAPELI------S---------RLPYGPEVDIWSLGIMVIEMVDGEPPY 347 (423)
T ss_dssp CEEECCCTTCEECCSSCC--CBCCCEECTTTCCHHHH------T---------TCCBCTHHHHHHHHHHHHHHHHSSCTT
T ss_pred CEEEecCccceECCCCCc--cccccccCcCcCCHHHH------C---------CCCCCcHHHHHHHHHHHHHHHHCCCCC
Confidence 35777 88887765533 36789999999999999 2 356789999999999999999999 99
Q ss_pred hHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 90 TKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
.+.+...+. ..+....+ ...........++.+++.+||++||.+||++.++.+
T Consensus 348 ~~~~~~~~~-----------------~~i~~~~~-~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~ 400 (423)
T 4fie_A 348 FNEPPLKAM-----------------KMIRDNLP-PRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLK 400 (423)
T ss_dssp TTSCHHHHH-----------------HHHHHSCC-CCCSCTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred CCcCHHHHH-----------------HHHHcCCC-CCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 765433110 11111000 001112234556999999999999999999877554
No 167
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.72 E-value=5.3e-16 Score=156.64 Aligned_cols=184 Identities=13% Similarity=0.063 Sum_probs=134.6
Q ss_pred ccceeeecCcceEEEeeCCCeEEEEEe------------------------ecCccceEEEEEc--CCEEE----EEeCC
Q 008820 222 IDQARAAGGVKDLVNGLSKGNVKFKDL------------------------QGHRDCVTGLAVG--GGFLF----SSSFD 271 (552)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~l------------------------~~H~~~V~~l~~s--~~~l~----s~s~d 271 (552)
.+..++++....++.+..++ +.++.. ..|.+.|++++|+ +++|+ +|+.|
T Consensus 39 ~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~sgs~d 117 (434)
T 2oit_A 39 SSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMSSEYG 117 (434)
T ss_dssp CBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEEETTTE
T ss_pred ccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEeccCCC
Confidence 55666777777777776665 555431 1245579999999 88999 88999
Q ss_pred CcEEEEeCCCC--------e---EEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCccccccccCCCc
Q 008820 272 KSIHVWSLKDF--------S---HVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDW 340 (552)
Q Consensus 272 g~I~iwd~~~~--------~---~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~ 340 (552)
++|+|||+.++ + .+..+.+|...|.+++|+|++..++++++.||+|++||++++.. ......+.
T Consensus 118 ~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~---~~~~~~~~-- 192 (434)
T 2oit_A 118 SIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVK---VCATLPST-- 192 (434)
T ss_dssp EEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEE---EEEEECGG--
T ss_pred ceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcc---eeeccCCC--
Confidence 99999998654 2 24556779999999999998788999999999999999987522 11111111
Q ss_pred eeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCceeEEecCCC-------CCeEEEEEe-CCEEE--EEeCCCc------E
Q 008820 341 RYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHK-------SAVSTLAVC-NGVLY--SGSRDGT------I 404 (552)
Q Consensus 341 ~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~-------~~v~~l~~~-~~~l~--s~~~dg~------i 404 (552)
......++++++++|++|+.||.|++||.+ ++....+..|. ..|.++.|+ ++.++ .++.||. +
T Consensus 193 ~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v 271 (434)
T 2oit_A 193 VAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDV 271 (434)
T ss_dssp GCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEE
T ss_pred CceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCce
Confidence 122345788999999999999999999998 66666665442 378999999 44333 3444433 8
Q ss_pred EEEECCCC
Q 008820 405 RLWSLSDH 412 (552)
Q Consensus 405 ~iwd~~~~ 412 (552)
++||+++.
T Consensus 272 ~i~~l~~~ 279 (434)
T 2oit_A 272 VMALLPKK 279 (434)
T ss_dssp EEEECCCT
T ss_pred EEEEeccC
Confidence 99999865
No 168
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.71 E-value=2.9e-15 Score=145.80 Aligned_cols=232 Identities=11% Similarity=0.067 Sum_probs=157.9
Q ss_pred ceEEEEEc--CCEE-EEEeCCCcEEEEeCCCCeEEEEEeCC-----CCCeEEEEEecCCCCEEEEEc-----------CC
Q 008820 254 CVTGLAVG--GGFL-FSSSFDKSIHVWSLKDFSHVHTFKGH-----DHKVMAVVYVDEDQPLCISGD-----------SG 314 (552)
Q Consensus 254 ~V~~l~~s--~~~l-~s~s~dg~I~iwd~~~~~~~~~~~~h-----~~~v~~v~~~~~~~~~l~s~~-----------~d 314 (552)
.+.+++|+ ++++ ++++.++.|.+||+.+++.+..+... ...+..++|+|++..++++.. .+
T Consensus 35 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~ 114 (337)
T 1pby_B 35 TPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQP 114 (337)
T ss_dssp CCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECC
T ss_pred CccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEEEecccccccccccccC
Confidence 47889998 6555 56667889999999999988877642 125778999998775544431 57
Q ss_pred CcEEEEeCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCceeEEecCCC--CCeEEEEEe-
Q 008820 315 GGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHK--SAVSTLAVC- 391 (552)
Q Consensus 315 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~--~~v~~l~~~- 391 (552)
+.|.+||+.+++....+.. .. .. ...++++++++++++ ++.|++||+.+++....+..+. .++ .|+
T Consensus 115 ~~i~v~d~~~~~~~~~~~~---~~--~~-~~~~~s~dg~~l~~~--~~~i~~~d~~~~~~~~~~~~~~~~~~~---~~s~ 183 (337)
T 1pby_B 115 TRVALYDAETLSRRKAFEA---PR--QI-TMLAWARDGSKLYGL--GRDLHVMDPEAGTLVEDKPIQSWEAET---YAQP 183 (337)
T ss_dssp CEEEEEETTTTEEEEEEEC---CS--SC-CCEEECTTSSCEEEE--SSSEEEEETTTTEEEEEECSTTTTTTT---BCCC
T ss_pred ceEEEEECCCCcEEEEEeC---CC--Cc-ceeEECCCCCEEEEe--CCeEEEEECCCCcEeeeeeccccCCCc---eeCC
Confidence 9999999986543322221 11 11 124689999988777 6899999999999887776543 222 444
Q ss_pred -CCEEEEEe-CCC-----------------------cEEEEECCCCceeEEEec-CCCCceEEEEEEcCCCCEEEEEECC
Q 008820 392 -NGVLYSGS-RDG-----------------------TIRLWSLSDHSLLTVLEE-DSSGAVSSVLSLTAVQHTLVVSHES 445 (552)
Q Consensus 392 -~~~l~s~~-~dg-----------------------~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~s~~~~~l~~g~~d 445 (552)
+..++..+ .++ .|.+||+.+++.. .+.. ....... .++++|++++++++ +
T Consensus 184 dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~-~~~~~~~~~~~~-~~~~s~dg~~l~~~--~ 259 (337)
T 1pby_B 184 DVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMA-MREVRIMDVFYF-STAVNPAKTRAFGA--Y 259 (337)
T ss_dssp BCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEE-EEEEEECSSCEE-EEEECTTSSEEEEE--E
T ss_pred CccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCce-EeecCCCCCcee-eEEECCCCCEEEEe--C
Confidence 22333322 222 4789999998875 3322 1222333 37999999999988 7
Q ss_pred CcEEEEeCCc--ceeeeecccceEEEEEe--cCCEEEEEeCCCeEEEEecCCCeeeeeec
Q 008820 446 GSIKVWRNDK--FMKSMQTHKGSVFAVFL--EGKWLFTGGWDKTVSVQELAGDEFEEDVI 501 (552)
Q Consensus 446 g~i~iwd~~~--~~~~~~~h~~~v~~v~~--~~~~l~sgs~dg~i~iwd~~~~~~~~~~~ 501 (552)
+.|++||... ....+..+ ..+.++.+ ++++|++++.++.|++||+.+++....+.
T Consensus 260 ~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~~~~~~~~~ 318 (337)
T 1pby_B 260 NVLESFDLEKNASIKRVPLP-HSYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQVD 318 (337)
T ss_dssp SEEEEEETTTTEEEEEEECS-SCCCEEEECTTSCEEEEESBSSEEEEEETTTCCEEEEEE
T ss_pred CeEEEEECCCCcCcceecCC-CceeeEEECCCCCEEEEEcCCCcEEEEECcCCcEEEEEE
Confidence 8999999754 33444432 23445554 89999999999999999999887665543
No 169
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.69 E-value=2.6e-15 Score=158.19 Aligned_cols=256 Identities=14% Similarity=0.063 Sum_probs=180.9
Q ss_pred ccceeeecCcceEEEeeC-CCeEEEEEeec--------Cc-cceEEEEEc-CCEEEEEeC---CCcEEEEeCCC---CeE
Q 008820 222 IDQARAAGGVKDLVNGLS-KGNVKFKDLQG--------HR-DCVTGLAVG-GGFLFSSSF---DKSIHVWSLKD---FSH 284 (552)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~--------H~-~~V~~l~~s-~~~l~s~s~---dg~I~iwd~~~---~~~ 284 (552)
+..+.++++++.++.... ++.+.+|.+.+ |. ..|.+++|+ ++.+++++. +...++|.+.. +..
T Consensus 24 ~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~~lt~~~~~~~~~~~~spd~~l~~~~~~~g~~~~~l~~~~~~~~g~~ 103 (582)
T 3o4h_A 24 KYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETVKLNREPINSVLDPHYGVGRVILVRDVSKGAEQHALFKVNTSRPGEE 103 (582)
T ss_dssp EEEEEEEETTTEEEEEEEETTEEEEEEEETTEEEECCSSCCSEECEECTTCSEEEEEEECSTTSCCEEEEEEETTSTTCC
T ss_pred hheeecCCCCCeEEEEEccCCceeEEEEcCCCcEeeecccccccccccCCCCeEEEEeccCCCCcceEEEEEeccCCCcc
Confidence 667788888888887765 88888888643 44 588999999 666666664 45566665432 332
Q ss_pred EEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCC---
Q 008820 285 VHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGD--- 361 (552)
Q Consensus 285 ~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~d--- 361 (552)
. .+..+ ..+...+|+|+++.++++.+.++.+.+||+.+++...... ... ....++|||+.+++++.+
T Consensus 104 ~-~l~~~-~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~----~~~----~~~~~spDG~~la~~~~~~~~ 173 (582)
T 3o4h_A 104 Q-RLEAV-KPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELAR----LPG----FGFVSDIRGDLIAGLGFFGGG 173 (582)
T ss_dssp E-ECTTS-CSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEE----ESS----CEEEEEEETTEEEEEEEEETT
T ss_pred c-cccCC-CCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeec----CCC----ceEEECCCCCEEEEEEEcCCC
Confidence 2 33322 2345678999888766666666666699998664322211 111 345789999999988877
Q ss_pred -CcEEEEECCCCceeEEecCCCCCeEEEEEe-CC-EEEEEeCCC--cEEEEECCCCceeEEEecCCCCceEEE-------
Q 008820 362 -RTIKAWSLLDGTLSCTMSGHKSAVSTLAVC-NG-VLYSGSRDG--TIRLWSLSDHSLLTVLEEDSSGAVSSV------- 429 (552)
Q Consensus 362 -g~i~iwd~~~~~~~~~~~~h~~~v~~l~~~-~~-~l~s~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~------- 429 (552)
+.|++||+.+++.. .+..|...+.+++|+ ++ .|+++..++ .|++||+.+++.. .+..+ ...+...
T Consensus 174 ~~~i~~~d~~~g~~~-~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~-~~~~~~~~~~~~~~ 250 (582)
T 3o4h_A 174 RVSLFTSNLSSGGLR-VFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELP-SKDFSSYRPTAITW 250 (582)
T ss_dssp EEEEEEEETTTCCCE-EECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCS-CSHHHHHCCSEEEE
T ss_pred CeEEEEEcCCCCCce-EeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCC-CcChhhhhhccccc
Confidence 78999999888765 677788899999999 44 788888888 8999999998877 44433 2222221
Q ss_pred EEEcCCCCEEEEEECCCcEEEEeCCcceeeeecccceEEEEEe-cCCEEEEEeCCCe---EEEEecCC
Q 008820 430 LSLTAVQHTLVVSHESGSIKVWRNDKFMKSMQTHKGSVFAVFL-EGKWLFTGGWDKT---VSVQELAG 493 (552)
Q Consensus 430 ~~~s~~~~~l~~g~~dg~i~iwd~~~~~~~~~~h~~~v~~v~~-~~~~l~sgs~dg~---i~iwd~~~ 493 (552)
.+|+|||.++++++.|+++++|+.++... .+.+.+.++++ +++++++++.+.+ +++||..+
T Consensus 251 ~~~spdg~~~~~~~~~g~~~l~~~g~~~~---~~~~~v~~~~~sdg~~l~~~s~~~~p~~l~~~d~~~ 315 (582)
T 3o4h_A 251 LGYLPDGRLAVVARREGRSAVFIDGERVE---APQGNHGRVVLWRGKLVTSHTSLSTPPRIVSLPSGE 315 (582)
T ss_dssp EEECTTSCEEEEEEETTEEEEEETTEEEC---CCSSEEEEEEEETTEEEEEEEETTEEEEEEEETTCC
T ss_pred eeEcCCCcEEEEEEcCCcEEEEEECCeec---cCCCceEEEEecCCEEEEEEcCCCCCCeEEEEcCCC
Confidence 23999999999999999999999832222 34466766665 8888888887744 77777655
No 170
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.67 E-value=1.3e-13 Score=135.88 Aligned_cols=265 Identities=11% Similarity=0.147 Sum_probs=160.1
Q ss_pred CCCcEEEEeC--CCCeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCC----CcEEEEeCCCC-CCCccccccccCCCcee
Q 008820 270 FDKSIHVWSL--KDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSG----GGIFVWSFSFP-LGHEPLKKWNEEKDWRY 342 (552)
Q Consensus 270 ~dg~I~iwd~--~~~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~d----g~i~vwd~~~~-~~~~~~~~~~~~~~~~~ 342 (552)
.++.|.+|++ .+++.......+...+..++|+|++. +|++++.+ +.|.+|+++.. .....+........
T Consensus 25 ~~~~i~~~~~d~~~g~~~~~~~~~~~~p~~l~~spdg~-~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~--- 100 (361)
T 3scy_A 25 NSKGIYTFRFNEETGESLPLSDAEVANPSYLIPSADGK-FVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGA--- 100 (361)
T ss_dssp SCCEEEEEEEETTTCCEEEEEEEECSCCCSEEECTTSS-EEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSS---
T ss_pred CCCCEEEEEEeCCCCCEEEeecccCCCCceEEECCCCC-EEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCC---
Confidence 3567888866 45654332222667788899999876 44555554 89999998753 11222222211111
Q ss_pred eeEEEEeeCCCEEEEee-CCCcEEEEECCCCceeEE------ecC--------CCCCeEEEEEe-CC-EEEEEe-CCCcE
Q 008820 343 SGIHALTTSGRYLYTGS-GDRTIKAWSLLDGTLSCT------MSG--------HKSAVSTLAVC-NG-VLYSGS-RDGTI 404 (552)
Q Consensus 343 ~~~~~~~~~~~~l~sgs-~dg~i~iwd~~~~~~~~~------~~~--------h~~~v~~l~~~-~~-~l~s~~-~dg~i 404 (552)
....+..+++++++++ .++.|.+|++.....+.. ..+ +...+.+++|+ ++ ++++++ .++.|
T Consensus 101 -~p~~~~~dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v 179 (361)
T 3scy_A 101 -DPCYLTTNGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQI 179 (361)
T ss_dssp -CEEEEEECSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEE
T ss_pred -CcEEEEECCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEE
Confidence 1223334888776665 678999999975432211 111 12345889999 44 555544 58999
Q ss_pred EEEECCCCce------e------EEEecCCCCceEEEEEEcCCCCEEEEEE-CCCcEEEEeCCcc----eeeee---ccc
Q 008820 405 RLWSLSDHSL------L------TVLEEDSSGAVSSVLSLTAVQHTLVVSH-ESGSIKVWRNDKF----MKSMQ---THK 464 (552)
Q Consensus 405 ~iwd~~~~~~------~------~~~~~~~~~~~~~~~~~s~~~~~l~~g~-~dg~i~iwd~~~~----~~~~~---~h~ 464 (552)
++|++..... + ............ .++|+|+|+++++++ .++.|.+||.... ...+. .+.
T Consensus 180 ~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~ 258 (361)
T 3scy_A 180 HKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPR-HLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNA 258 (361)
T ss_dssp EEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEE-EEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCC
T ss_pred EEEEEcCCCCcccccceeecccccceecCCCCCCe-EEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCC
Confidence 9999875431 1 222222222333 379999999888877 5899999996421 22222 222
Q ss_pred ceEEEEEe--cCCEEEEEeCC--CeEEEEecC--CCeeeeeeccCCCcccCcceEEEEEeC-C-eEEEEe-CCCeEEEEE
Q 008820 465 GSVFAVFL--EGKWLFTGGWD--KTVSVQELA--GDEFEEDVIPTGAIPCGSVITALLYWQ-G-KLFVGC-ADRTVKIAL 535 (552)
Q Consensus 465 ~~v~~v~~--~~~~l~sgs~d--g~i~iwd~~--~~~~~~~~~~~~~~~~~~~v~~l~~~~-~-~l~s~s-~Dg~v~iw~ 535 (552)
.....+.+ ||++|+++..+ +.|.+|++. +++........ ....+..++|++ + .|++++ .++.|.+|+
T Consensus 259 ~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~----~g~~~~~~~~spdg~~l~~~~~~~~~v~v~~ 334 (361)
T 3scy_A 259 QGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQL----TGIHPRNFIITPNGKYLLVACRDTNVIQIFE 334 (361)
T ss_dssp CCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEE----CSSCCCEEEECTTSCEEEEEETTTTEEEEEE
T ss_pred CCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEec----CCCCCceEEECCCCCEEEEEECCCCCEEEEE
Confidence 33455554 99998776654 899999996 34432221111 123467899995 3 477776 679999998
Q ss_pred ecCCcceeE
Q 008820 536 CNRQIPEIF 544 (552)
Q Consensus 536 ~~~~~~~~~ 544 (552)
++.....+.
T Consensus 335 ~d~~~g~~~ 343 (361)
T 3scy_A 335 RDQATGLLT 343 (361)
T ss_dssp ECTTTCCEE
T ss_pred EECCCCcEe
Confidence 875443433
No 171
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=99.67 E-value=7.2e-18 Score=161.09 Aligned_cols=143 Identities=8% Similarity=0.044 Sum_probs=81.3
Q ss_pred hhhhhcc--cccccccccchh--hhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhC
Q 008820 11 KSVAKVG--CVGSRICDKEVG--LFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIG 86 (552)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg 86 (552)
.-.+|++ |+|+.+...... ......+|||.|||||++.+.... ..+.++.++|||||||+||||+||
T Consensus 144 ~~~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~---------~~~~~~~k~DVwS~Gvvl~El~tg 214 (303)
T 3hmm_A 144 NGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINM---------KHFESFKRADIYAMGLVFWEIARR 214 (303)
T ss_dssp TSCEEECCCTTCEEEETTTTEESCC-----CCGGGCCHHHHTTCSCT---------TCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEeCCCCccccCCCCceeeecccccccccccCHHHhcccccc---------cCCccChhHhhhhHHHHHHHHHHC
Confidence 3467888 888777654332 234567899999999999221110 124577899999999999999999
Q ss_pred C-CchHHHhhhhhhccccCCCchhhhhhhhHHHHHHHH------HHHhhhhc-CccccHHHHHHhhcccCCCCCcchhhH
Q 008820 87 E-QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVT------YLLENKFG-SEFVSLQLMFCQCLNFDPGCRPLLTNV 158 (552)
Q Consensus 87 ~-pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~-~~~~~l~~~~~~~l~~~p~~R~~~~~~ 158 (552)
+ ||......+.- .....+..+. .......+. ..|..... .....+.+++.+|++.+|.+||++.++
T Consensus 215 ~~~~~~~~~~~~p--~~~~~~~~~~----~~~~~~~~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei 288 (303)
T 3hmm_A 215 CSIGGIHEDYQLP--YYDLVPSDPS----VEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRI 288 (303)
T ss_dssp BCBTTBCCCCCCT--TTTTSCSSCC----HHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHH
T ss_pred CCCCCcccccccc--chhcccccch----HHHHHHHHhcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHH
Confidence 9 77432211000 0000000000 011111110 00100000 011247889999999999999999999
Q ss_pred HHHHHhhhcC
Q 008820 159 WKCIRELIIK 168 (552)
Q Consensus 159 ~~~l~~~~~~ 168 (552)
.+.+.++...
T Consensus 289 ~~~L~~l~~~ 298 (303)
T 3hmm_A 289 KKTLSQLSQQ 298 (303)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHHHH
Confidence 9998887643
No 172
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.65 E-value=8.9e-14 Score=148.85 Aligned_cols=292 Identities=8% Similarity=-0.011 Sum_probs=183.4
Q ss_pred EEeecCccceEEEEEcCCEEE--EE--eCCCcEEEEeCCCCeEEEEEeCCCCCeE---------EEEEe--cCCCC-EEE
Q 008820 246 KDLQGHRDCVTGLAVGGGFLF--SS--SFDKSIHVWSLKDFSHVHTFKGHDHKVM---------AVVYV--DEDQP-LCI 309 (552)
Q Consensus 246 ~~l~~H~~~V~~l~~s~~~l~--s~--s~dg~I~iwd~~~~~~~~~~~~h~~~v~---------~v~~~--~~~~~-~l~ 309 (552)
..+.+|...|..++++++.++ +. +.++...||....+.....+..|...+. ...|+ |+++. +++
T Consensus 17 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~ 96 (662)
T 3azo_A 17 ALVASRSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVF 96 (662)
T ss_dssp HHHHHTCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEE
T ss_pred HHHhhcCCccceeEEcCCeEEEEecCcccCCcEEEEEECCCCCcceeCCCCccccccccccCCccceeeeecCCCeEEEE
Confidence 346789999999999955443 33 3478899999655555667777776666 66676 88887 655
Q ss_pred EEcCCCcEEEEeCC--CCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCC----------CcEEEEECCC------
Q 008820 310 SGDSGGGIFVWSFS--FPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGD----------RTIKAWSLLD------ 371 (552)
Q Consensus 310 s~~~dg~i~vwd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~d----------g~i~iwd~~~------ 371 (552)
+...+..|.+|++. .......+...............+++|+|+.|++++.| ..|++||+.+
T Consensus 97 ~~~~~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 176 (662)
T 3azo_A 97 THFGDQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADR 176 (662)
T ss_dssp EBTTTCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCG
T ss_pred EECCCCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccC
Confidence 55556777777765 20222222221100011233345899999999988877 5899999987
Q ss_pred CceeEEec-CCCCCeEEEEEe-CC-EEEEEeCC--------CcEEEEECC-CCc--eeEEEecCCCCceEEEEEEcCCCC
Q 008820 372 GTLSCTMS-GHKSAVSTLAVC-NG-VLYSGSRD--------GTIRLWSLS-DHS--LLTVLEEDSSGAVSSVLSLTAVQH 437 (552)
Q Consensus 372 ~~~~~~~~-~h~~~v~~l~~~-~~-~l~s~~~d--------g~i~iwd~~-~~~--~~~~~~~~~~~~~~~~~~~s~~~~ 437 (552)
++. ..+. .+...+..++|+ ++ .|+.++.+ ..|++||+. +++ ....+...+...... ..|+|||+
T Consensus 177 ~~~-~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~-~~~spdg~ 254 (662)
T 3azo_A 177 SAV-RELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQ-AEWAPDGS 254 (662)
T ss_dssp GGS-EESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEE-EEECTTSC
T ss_pred Cce-eEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcc-eEECCCCe
Confidence 554 4555 566778889999 44 77777755 379999998 562 333333332333444 68999999
Q ss_pred EEEEEECCC--cEEEEeCC-cceeee-ecccce--------EEEEEe--cCCEEEEEeCCCeEEEE--ecCCCeeeeeec
Q 008820 438 TLVVSHESG--SIKVWRND-KFMKSM-QTHKGS--------VFAVFL--EGKWLFTGGWDKTVSVQ--ELAGDEFEEDVI 501 (552)
Q Consensus 438 ~l~~g~~dg--~i~iwd~~-~~~~~~-~~h~~~--------v~~v~~--~~~~l~sgs~dg~i~iw--d~~~~~~~~~~~ 501 (552)
++++++.++ .|++||.. .....+ ..+... +..+.+ +++++++++. +.+++| |+.+++... +.
T Consensus 255 l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~~~~~-l~ 332 (662)
T 3azo_A 255 LIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILDPESGELVD-AA 332 (662)
T ss_dssp EEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEETTTTEEEE-CC
T ss_pred EEEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc-CccEEEEEECCCCcEEE-ec
Confidence 888888888 56666652 222222 222211 234444 7889999998 999999 655555332 22
Q ss_pred cCCCcccCcceEEE-EEeCCe--EEEEeCCCeEEEEEecCCcceeEEE
Q 008820 502 PTGAIPCGSVITAL-LYWQGK--LFVGCADRTVKIALCNRQIPEIFSL 546 (552)
Q Consensus 502 ~~~~~~~~~~v~~l-~~~~~~--l~s~s~Dg~v~iw~~~~~~~~~~~~ 546 (552)
.. ...+..+ +++++. +++++.+....+|.++........+
T Consensus 333 ~~-----~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~l 375 (662)
T 3azo_A 333 GP-----WTEWAATLTVSGTRAVGVAASPRTAYEVVELDTVTGRARTI 375 (662)
T ss_dssp SS-----CCEEEEEEEEETTEEEEEEEETTEEEEEEEEETTTCCEEEE
T ss_pred CC-----CCeEEEEEecCCCEEEEEEcCCCCCCEEEEEECCCCceEEe
Confidence 11 3446666 676665 4455667667777665433344444
No 173
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.64 E-value=7.8e-14 Score=138.78 Aligned_cols=290 Identities=9% Similarity=0.002 Sum_probs=183.2
Q ss_pred EEEEEeecCccceEE-----EEEc--CCEEEEEeC-CCc--EEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCCEEEEEc
Q 008820 243 VKFKDLQGHRDCVTG-----LAVG--GGFLFSSSF-DKS--IHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGD 312 (552)
Q Consensus 243 ~~~~~l~~H~~~V~~-----l~~s--~~~l~s~s~-dg~--I~iwd~~~~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~ 312 (552)
..+..+..|...... .+|+ |++|+.++. ++. |.+||+.+++......++...+..++|+|++. .|+.++
T Consensus 21 ~~~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~-~l~~~~ 99 (388)
T 3pe7_A 21 AQVTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDD-ALFYVK 99 (388)
T ss_dssp CEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSS-EEEEEE
T ss_pred cceEEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCC-EEEEEe
Confidence 345667778776666 7888 888888887 664 88889999988877777766666778999776 567777
Q ss_pred CCCcEEEEeCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEE----------------------eeCCCcEEEEECC
Q 008820 313 SGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYT----------------------GSGDRTIKAWSLL 370 (552)
Q Consensus 313 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s----------------------gs~dg~i~iwd~~ 370 (552)
.++.|++||+.+++...... .+..........++++++.++. ...++.|++||+.
T Consensus 100 ~~~~l~~~d~~~g~~~~~~~---~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~ 176 (388)
T 3pe7_A 100 DGRNLMRVDLATLEENVVYQ---VPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLK 176 (388)
T ss_dssp TTTEEEEEETTTCCEEEEEE---CCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETT
T ss_pred CCCeEEEEECCCCcceeeee---chhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECC
Confidence 78999999998765332221 1122121222345788887763 2345789999999
Q ss_pred CCceeEEecCCCCCeEEEEEeC-C--EEEEEeCC------CcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEE
Q 008820 371 DGTLSCTMSGHKSAVSTLAVCN-G--VLYSGSRD------GTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVV 441 (552)
Q Consensus 371 ~~~~~~~~~~h~~~v~~l~~~~-~--~l~s~~~d------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~ 441 (552)
+++.... ..+...+..+.|++ + .|+.++.+ ..|.++|...++. ..+..+..+.......|+|||+.|+.
T Consensus 177 ~g~~~~l-~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~~~~~~~~~~~~spdg~~l~~ 254 (388)
T 3pe7_A 177 TGESTVI-LQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNM-RKVKTHAEGESCTHEFWVPDGSALVY 254 (388)
T ss_dssp TCCEEEE-EEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCC-EESCCCCTTEEEEEEEECTTSSCEEE
T ss_pred CCceEEe-ecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCce-EEeeeCCCCcccccceECCCCCEEEE
Confidence 8876544 34666789999996 4 66666553 3788888866543 33333322222333689999997755
Q ss_pred EEC-CC----cEEEEeCCcc----eeeeecccceE-----EEEEecCCEEEEE---------eCCCeEEEEecCCCeeee
Q 008820 442 SHE-SG----SIKVWRNDKF----MKSMQTHKGSV-----FAVFLEGKWLFTG---------GWDKTVSVQELAGDEFEE 498 (552)
Q Consensus 442 g~~-dg----~i~iwd~~~~----~~~~~~h~~~v-----~~v~~~~~~l~sg---------s~dg~i~iwd~~~~~~~~ 498 (552)
.+. ++ .|++||+... +..+.++.... ..+++||+.|+.. ..+..|++||+.+++...
T Consensus 255 ~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~ 334 (388)
T 3pe7_A 255 VSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQHR 334 (388)
T ss_dssp EEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETTTTEEEE
T ss_pred EecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCCceEE
Confidence 443 22 3999996532 22222211111 1467788877754 456789999999887654
Q ss_pred eeccCCCc-----ccCcceEEEEEeC-C-eEEE-EeCCCeEEEEEecC
Q 008820 499 DVIPTGAI-----PCGSVITALLYWQ-G-KLFV-GCADRTVKIALCNR 538 (552)
Q Consensus 499 ~~~~~~~~-----~~~~~v~~l~~~~-~-~l~s-~s~Dg~v~iw~~~~ 538 (552)
........ .....+.+++|++ + .|+. +..+|...||.++.
T Consensus 335 l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~~~l 382 (388)
T 3pe7_A 335 VARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYLATL 382 (388)
T ss_dssp EEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEEC
T ss_pred eccccCcccccccccccCCCCccCCCCCCEEEEEecCCCceeEEEEEC
Confidence 43332100 0011366778885 3 3554 44688888888764
No 174
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=99.64 E-value=2.7e-17 Score=156.26 Aligned_cols=110 Identities=22% Similarity=0.284 Sum_probs=64.0
Q ss_pred hhhcc--cccccccccchh----------hhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhh
Q 008820 13 VAKVG--CVGSRICDKEVG----------LFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACIL 80 (552)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~----------~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l 80 (552)
..|++ |+|+.+...... .-.++.+|||.|||||++ .| ..+++++|||||||+|
T Consensus 156 ~vKl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~------~~---------~~y~~~~DiwSlGvil 220 (299)
T 4g31_A 156 VVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQI------HG---------NSYSHKVDIFSLGLIL 220 (299)
T ss_dssp CEEECCCCCC--------------------------CCCTTSCHHHH------TT---------CCCCTHHHHHHHHHHH
T ss_pred cEEEccCccceecCCCccccccccccccccccCCcccCccccCHHHH------cC---------CCCCCHHHHHHHHHHH
Confidence 46777 888877654321 124567899999999999 33 5678999999999999
Q ss_pred hhhhhCCCchHHHhh--hhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhH
Q 008820 81 LSLLIGEQFTKELID--YIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNV 158 (552)
Q Consensus 81 ~~lltg~pf~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~ 158 (552)
|||++ ||...... .+..+..... +. ... ...+.+.+++.+||+.+|.+||++.++
T Consensus 221 yell~--Pf~~~~~~~~~~~~~~~~~~---------p~--------~~~----~~~~~~~~li~~~L~~dP~~Rps~~ei 277 (299)
T 4g31_A 221 FELLY--PFSTQMERVRTLTDVRNLKF---------PP--------LFT----QKYPCEYVMVQDMLSPSPMERPEAINI 277 (299)
T ss_dssp HHHHS--CCSSHHHHHHHHHHHHTTCC---------CH--------HHH----HHCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred HHHcc--CCCCccHHHHHHHHHhcCCC---------CC--------CCc----ccCHHHHHHHHHHcCCChhHCcCHHHH
Confidence 99997 77543211 1110000000 00 000 012236789999999999999998876
Q ss_pred HH
Q 008820 159 WK 160 (552)
Q Consensus 159 ~~ 160 (552)
.+
T Consensus 278 l~ 279 (299)
T 4g31_A 278 IE 279 (299)
T ss_dssp HT
T ss_pred hc
Confidence 54
No 175
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=99.63 E-value=6.7e-17 Score=159.67 Aligned_cols=132 Identities=17% Similarity=0.294 Sum_probs=76.2
Q ss_pred hhcc--cccccccccch--hhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-C
Q 008820 14 AKVG--CVGSRICDKEV--GLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (552)
Q Consensus 14 ~~~~--~~~~~~~~~~~--~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-p 88 (552)
.|+. |+|+.+..... ....+.++|||.|||||++ .| ...++.++|||||||+||||+||+ |
T Consensus 197 ~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~Y~APEv~------~~--------~~~~~~~~DiWSlG~il~ell~G~~p 262 (398)
T 4b99_A 197 LKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELM------LS--------LHEYTQAIDLWSVGCIFGEMLARRQL 262 (398)
T ss_dssp EEECCCTTCBCC-------CCCCCSSCCCCTTCCHHHH------TT--------CSCCCTHHHHHHHHHHHHHHHHTSCS
T ss_pred EEEeecceeeecccCccccccccccceeChHhcCHHHh------cC--------CCCCCChhheehhHHHHHHHHHCCCC
Confidence 4555 78877755432 2346789999999999998 33 234678999999999999999999 9
Q ss_pred chHHHhhhh----hhccccCCCchhhhhhhhHHHHHHHHHHH-------hhhhcCccccHHHHHHhhcccCCCCCcchhh
Q 008820 89 FTKELIDYI----RCVSTKASDDNIACLGMYMAWMEKVTYLL-------ENKFGSEFVSLQLMFCQCLNFDPGCRPLLTN 157 (552)
Q Consensus 89 f~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~ 157 (552)
|.+.+...+ ....+...+..|..... ..........+ .........++.++|.+||.+||.+||++.+
T Consensus 263 F~g~~~~~~l~~I~~~~g~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e 341 (398)
T 4b99_A 263 FPGKNYVHQLQLIMMVLGTPSPAVIQAVGA-ERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAA 341 (398)
T ss_dssp SCCSSHHHHHHHHHHHHCCCCGGGTC------CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHH
T ss_pred CCCCCHHHHHHHHHHhcCCCChHHhhhhhh-hhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHH
Confidence 965432211 11111111111100000 00000000000 0011123445889999999999999999887
Q ss_pred HHH
Q 008820 158 VWK 160 (552)
Q Consensus 158 ~~~ 160 (552)
+.+
T Consensus 342 ~L~ 344 (398)
T 4b99_A 342 ALR 344 (398)
T ss_dssp HTT
T ss_pred Hhc
Confidence 544
No 176
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.63 E-value=1.6e-13 Score=134.08 Aligned_cols=262 Identities=10% Similarity=0.023 Sum_probs=158.8
Q ss_pred cCcceEEEeeCCCeEEEEE---------eecCc-cceEEEEEc--CCEE-EEEeCCCcEEEEeCCCCeEEEEEeCCC---
Q 008820 229 GGVKDLVNGLSKGNVKFKD---------LQGHR-DCVTGLAVG--GGFL-FSSSFDKSIHVWSLKDFSHVHTFKGHD--- 292 (552)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~---------l~~H~-~~V~~l~~s--~~~l-~s~s~dg~I~iwd~~~~~~~~~~~~h~--- 292 (552)
.....+++...++.+.+++ +..+. ..+..++|+ ++++ +++..++.|.+||+.+++....+..+.
T Consensus 9 ~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~ 88 (349)
T 1jmx_B 9 AGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPG 88 (349)
T ss_dssp TTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTT
T ss_pred CCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcccccc
Confidence 3444555555555555555 33332 257788998 6655 555678999999999999888876432
Q ss_pred ---CCeEEEEEecCCCCEEEEEcC------------CCcEEEEeCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEE
Q 008820 293 ---HKVMAVVYVDEDQPLCISGDS------------GGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYT 357 (552)
Q Consensus 293 ---~~v~~v~~~~~~~~~l~s~~~------------dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s 357 (552)
..+..++|+|++..+ ++++. ++.|.+||+.+++....+........ ....+++++++ +++
T Consensus 89 ~~~~~~~~~~~spdg~~l-~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~---~~~~~~s~dg~-l~~ 163 (349)
T 1jmx_B 89 EVGRSMYSFAISPDGKEV-YATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQ---VYLMRAADDGS-LYV 163 (349)
T ss_dssp EEEECSSCEEECTTSSEE-EEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSS---CCCEEECTTSC-EEE
T ss_pred cccccccceEECCCCCEE-EEEcccccccccccccCCCeEEEEECCCccccceeeeccCCCc---ccceeECCCCc-EEE
Confidence 237889999987755 55544 48999999987543333333322221 12346889999 555
Q ss_pred eeCCCcEEEEECCCCceeEEecCCCC------------------------CeEEEEEe-CC--EEEEEeCCCcEEEEECC
Q 008820 358 GSGDRTIKAWSLLDGTLSCTMSGHKS------------------------AVSTLAVC-NG--VLYSGSRDGTIRLWSLS 410 (552)
Q Consensus 358 gs~dg~i~iwd~~~~~~~~~~~~h~~------------------------~v~~l~~~-~~--~l~s~~~dg~i~iwd~~ 410 (552)
++. .|++||+.+++.+..+..+.. ...+++++ ++ ..........+..+|..
T Consensus 164 ~~~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 241 (349)
T 1jmx_B 164 AGP--DIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLK 241 (349)
T ss_dssp ESS--SEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETT
T ss_pred ccC--cEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEecc
Confidence 543 499999999998877754320 12334443 11 00000001112224444
Q ss_pred CCceeEEEecCCCCceEEEEEEcC-CCCEEEEEECCCcEEEEeCCc--ceeeeecccceEEEEE--ecCCEEEEEeCCCe
Q 008820 411 DHSLLTVLEEDSSGAVSSVLSLTA-VQHTLVVSHESGSIKVWRNDK--FMKSMQTHKGSVFAVF--LEGKWLFTGGWDKT 485 (552)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~s~-~~~~l~~g~~dg~i~iwd~~~--~~~~~~~h~~~v~~v~--~~~~~l~sgs~dg~ 485 (552)
+++....-... .+.....++++| ++++++++ ++.|++||+.+ ....+... ..+.++. +++++|++++.++.
T Consensus 242 ~~~~~~~~~~~-~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~ 317 (349)
T 1jmx_B 242 TGKTHTQEFAD-LTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAANLD-HTYYCVAFDKKGDKLYLGGTFND 317 (349)
T ss_dssp TCCEEEEEEEE-CSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEECS-SCCCEEEECSSSSCEEEESBSSE
T ss_pred CCcEEeccccc-CCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEcCC-CCccceEECCCCCEEEEecCCCe
Confidence 44321111111 122333468999 99999988 88999999764 33444322 2234444 48888888888999
Q ss_pred EEEEecCCCeeeeeec
Q 008820 486 VSVQELAGDEFEEDVI 501 (552)
Q Consensus 486 i~iwd~~~~~~~~~~~ 501 (552)
|++||+.+.+....+.
T Consensus 318 v~v~d~~~~~~~~~~~ 333 (349)
T 1jmx_B 318 LAVFNPDTLEKVKNIK 333 (349)
T ss_dssp EEEEETTTTEEEEEEE
T ss_pred EEEEeccccceeeeee
Confidence 9999999887665543
No 177
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.63 E-value=1.1e-14 Score=157.48 Aligned_cols=267 Identities=9% Similarity=-0.020 Sum_probs=168.6
Q ss_pred EEEEc-CCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCC---CeEEEEEecCCCCEEEEEcC---------CCcEEEEeCC
Q 008820 257 GLAVG-GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDH---KVMAVVYVDEDQPLCISGDS---------GGGIFVWSFS 323 (552)
Q Consensus 257 ~l~~s-~~~l~s~s~dg~I~iwd~~~~~~~~~~~~h~~---~v~~v~~~~~~~~~l~s~~~---------dg~i~vwd~~ 323 (552)
+++|+ ...++..+.|++|++||+.+++....+.+|.. .+.+++|+|+++.+ ++++. ++.|++||+.
T Consensus 20 ~~~~s~dg~~~~~~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~l-a~~~~~~~~~~~s~~~~i~~~d~~ 98 (719)
T 1z68_A 20 FPNWISGQEYLHQSADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFV-YLESDYSKLWRYSYTATYYIYDLS 98 (719)
T ss_dssp CCEESSSSEEEEECTTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEE-EEEEEEEECSSSCEEEEEEEEETT
T ss_pred ccEECCCCeEEEEcCCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeE-EEEecCceeEEeecceEEEEEECC
Confidence 56777 22445555799999999999998877766544 48999999988755 55544 7899999998
Q ss_pred CCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCceeEEe-cCCCCCe-----------------
Q 008820 324 FPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTM-SGHKSAV----------------- 385 (552)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~-~~h~~~v----------------- 385 (552)
+++...... ... .....+++|||+.|+++. ++.|++||+.+++..... .++...|
T Consensus 99 ~g~~~~~~~-l~~-----~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~ 171 (719)
T 1z68_A 99 NGEFVRGNE-LPR-----PIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATK 171 (719)
T ss_dssp TTEECCSSC-CCS-----SBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSS
T ss_pred CCcccccee-cCc-----ccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCc
Confidence 765411011 111 112358999999998886 689999999888765432 2332222
Q ss_pred EEEEEe-CC-EEEEEeCCC----------------------------------cEEEEECCCCcee--EEEec-----CC
Q 008820 386 STLAVC-NG-VLYSGSRDG----------------------------------TIRLWSLSDHSLL--TVLEE-----DS 422 (552)
Q Consensus 386 ~~l~~~-~~-~l~s~~~dg----------------------------------~i~iwd~~~~~~~--~~~~~-----~~ 422 (552)
.+++|+ ++ .|++++.|. .|++||+.+++.. ..+.. .+
T Consensus 172 ~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~ 251 (719)
T 1z68_A 172 YALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASS 251 (719)
T ss_dssp CCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTS
T ss_pred ccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCC
Confidence 489999 44 888877652 7889999887653 12211 12
Q ss_pred CCceEEEEEEcCCCCEEEEEECC----CcEEEEe----CCc--ceeee----ecccceEE-----E--EEecCCEEEE--
Q 008820 423 SGAVSSVLSLTAVQHTLVVSHES----GSIKVWR----NDK--FMKSM----QTHKGSVF-----A--VFLEGKWLFT-- 479 (552)
Q Consensus 423 ~~~~~~~~~~s~~~~~l~~g~~d----g~i~iwd----~~~--~~~~~----~~h~~~v~-----~--v~~~~~~l~s-- 479 (552)
...+. .++|+||++++++.... ..|.+|| ... ....+ ..|...+. . +++||+.++.
T Consensus 252 ~~~~~-~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~ 330 (719)
T 1z68_A 252 DYYFS-WLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIF 330 (719)
T ss_dssp CEEEE-EEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEE
T ss_pred cceEE-EeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeEEEEE
Confidence 22333 36899998877775433 2488889 543 33333 35555544 3 4458885544
Q ss_pred EeCCC--eEEEEecCCCeeeeeeccCCCcccCcceEEEEEeC-CeEEEEeC-----CCeEEEEEecC
Q 008820 480 GGWDK--TVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQ-GKLFVGCA-----DRTVKIALCNR 538 (552)
Q Consensus 480 gs~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~~-~~l~s~s~-----Dg~v~iw~~~~ 538 (552)
+..+| .|.+||+.+++... +... ...+..+.+.+ +.++..+. ++..++|.++.
T Consensus 331 ~~~~g~~~l~~~~~~~~~~~~-lt~~-----~~~v~~~~~~d~~~i~~~~~~~~~~~~~~~l~~~~~ 391 (719)
T 1z68_A 331 SDKDGYKHIHYIKDTVENAIQ-ITSG-----KWEAINIFRVTQDSLFYSSNEFEEYPGRRNIYRISI 391 (719)
T ss_dssp ECTTSCEEEEEESSCSTTCEE-CSCS-----SSCEEEEEEECSSEEEEEESCGGGCTTCBEEEEEEC
T ss_pred EccCCceEEEEEECCCCceEe-cccC-----ceEEEEEEEEeCCEEEEEEecCCCCCceEEEEEEeC
Confidence 44555 57777877665322 2211 22344444444 44665554 48899999874
No 178
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=99.62 E-value=9.5e-17 Score=165.74 Aligned_cols=107 Identities=16% Similarity=0.170 Sum_probs=75.8
Q ss_pred hhhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cc
Q 008820 13 VAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QF 89 (552)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf 89 (552)
..|++ |+|+.+.... ...++|||.|||||++ .+ ...++.++|+|||||+|||||||+ ||
T Consensus 330 ~vKL~DFGlA~~~~~~~----~~t~~GTp~YmAPEvl------~~--------~~~y~~~vDiWSLGvilYEmLtG~~PF 391 (689)
T 3v5w_A 330 HVRISDLGLACDFSKKK----PHASVGTHGYMAPEVL------QK--------GVAYDSSADWFSLGCMLFKLLRGHSPF 391 (689)
T ss_dssp CEEECCCTTCEECSSCC----CCSCCSCGGGCCHHHH------ST--------TCCCCTHHHHHHHHHHHHHHHHSSCTT
T ss_pred CEEecccceeeecCCCC----CCCccCCcCccCHHHH------hC--------CCCCCcHHHHHHHHHHHHHHHhCCCCC
Confidence 35666 8888876653 4578999999999999 21 235788999999999999999999 99
Q ss_pred hHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcch
Q 008820 90 TKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLL 155 (552)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~ 155 (552)
.+...... ..+...+.......+....+++.+++.+||+++|.+|++.
T Consensus 392 ~~~~~~~~------------------~~i~~~i~~~~~~~p~~~S~~a~dLI~~lL~~dP~~Rl~~ 439 (689)
T 3v5w_A 392 RQHKTKDK------------------HEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGC 439 (689)
T ss_dssp CGGGCCCH------------------HHHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSCGGGCTTC
T ss_pred CCCChHHH------------------HHHHHhhcCCCCCCCccCCHHHHHHHHHHccCCHhHCCCC
Confidence 76543310 0111222222222223345669999999999999999984
No 179
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.62 E-value=3.6e-14 Score=153.44 Aligned_cols=307 Identities=8% Similarity=0.017 Sum_probs=185.1
Q ss_pred eeeecCcceEEEeeCCCeEEEEEee---------cCcc---ceEEEEEc--CCEEEEEeC---------CCcEEEEeCCC
Q 008820 225 ARAAGGVKDLVNGLSKGNVKFKDLQ---------GHRD---CVTGLAVG--GGFLFSSSF---------DKSIHVWSLKD 281 (552)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~l~---------~H~~---~V~~l~~s--~~~l~s~s~---------dg~I~iwd~~~ 281 (552)
..+++++. ++....++.+.+|+.. +|.. .|.+++|+ |++|++++. |+.|++||+.+
T Consensus 21 ~~~s~dg~-~~~~~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~ 99 (719)
T 1z68_A 21 PNWISGQE-YLHQSADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSN 99 (719)
T ss_dssp CEESSSSE-EEEECTTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTT
T ss_pred cEECCCCe-EEEEcCCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCC
Confidence 34445553 3333346666666643 2332 38899999 899998876 78999999999
Q ss_pred CeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCccccccccCCCc---------------eeeeEE
Q 008820 282 FSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDW---------------RYSGIH 346 (552)
Q Consensus 282 ~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~---------------~~~~~~ 346 (552)
++.+... .....+..++|+|+++.++. + .|+.|++||+.++........ ..... ......
T Consensus 100 g~~~~~~-~l~~~~~~~~~SPDG~~la~-~-~~~~i~~~~~~~g~~~~l~~~--~~~~~v~~g~~~~v~~ee~~~~~~~~ 174 (719)
T 1z68_A 100 GEFVRGN-ELPRPIQYLCWSPVGSKLAY-V-YQNNIYLKQRPGDPPFQITFN--GRENKIFNGIPDWVYEEEMLATKYAL 174 (719)
T ss_dssp TEECCSS-CCCSSBCCEEECSSTTCEEE-E-ETTEEEEESSTTSCCEECCCC--CBTTTEEESSCCHHHHHHTTCSSCCE
T ss_pred Cccccce-ecCcccccceECCCCCEEEE-E-ECCeEEEEeCCCCCcEEEecC--CCcCCeEcccccceeeeecccCcccE
Confidence 8763111 11356889999999886644 4 378999999987654321111 11000 001246
Q ss_pred EEeeCCCEEEEeeCCC----------------------------------cEEEEECCCCcee--------EEecCCCCC
Q 008820 347 ALTTSGRYLYTGSGDR----------------------------------TIKAWSLLDGTLS--------CTMSGHKSA 384 (552)
Q Consensus 347 ~~~~~~~~l~sgs~dg----------------------------------~i~iwd~~~~~~~--------~~~~~h~~~ 384 (552)
+|+|||+.|++++.|. .|++||+.+++.. ..+.+|...
T Consensus 175 ~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 254 (719)
T 1z68_A 175 WWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYY 254 (719)
T ss_dssp EECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEE
T ss_pred EECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcce
Confidence 8999999999887652 7889999887753 123468888
Q ss_pred eEEEEEe-CC-EEEEEeCC----CcEEEEE----CCCCceeEEEe---cCCCCceE----EEEEEcCCCCEEEE--EECC
Q 008820 385 VSTLAVC-NG-VLYSGSRD----GTIRLWS----LSDHSLLTVLE---EDSSGAVS----SVLSLTAVQHTLVV--SHES 445 (552)
Q Consensus 385 v~~l~~~-~~-~l~s~~~d----g~i~iwd----~~~~~~~~~~~---~~~~~~~~----~~~~~s~~~~~l~~--g~~d 445 (552)
+.+++|+ ++ ++++.... ..|.+|| +.+++....+. ..+.+.+. ....|+|||+.++. +..+
T Consensus 255 ~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~ 334 (719)
T 1z68_A 255 FSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKD 334 (719)
T ss_dssp EEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTT
T ss_pred EEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEccC
Confidence 9999999 55 44443322 2488999 77776544332 22223222 12589999986554 4455
Q ss_pred C--cEEEEeCCc-ceeeeecccceEEEEEe-cCCEEEEEeCC-----CeEEEEecCC--CeeeeeeccCCCcccCcceEE
Q 008820 446 G--SIKVWRNDK-FMKSMQTHKGSVFAVFL-EGKWLFTGGWD-----KTVSVQELAG--DEFEEDVIPTGAIPCGSVITA 514 (552)
Q Consensus 446 g--~i~iwd~~~-~~~~~~~h~~~v~~v~~-~~~~l~sgs~d-----g~i~iwd~~~--~~~~~~~~~~~~~~~~~~v~~ 514 (552)
| .|++||... ....+..+...+..+.+ +++.|+..+.+ +..++|.+.. +.............+...+..
T Consensus 335 g~~~l~~~~~~~~~~~~lt~~~~~v~~~~~~d~~~i~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~l~~~~~~~~~~~~~ 414 (719)
T 1z68_A 335 GYKHIHYIKDTVENAIQITSGKWEAINIFRVTQDSLFYSSNEFEEYPGRRNIYRISIGSYPPSKKCVTCHLRKERCQYYT 414 (719)
T ss_dssp SCEEEEEESSCSTTCEECSCSSSCEEEEEEECSSEEEEEESCGGGCTTCBEEEEEECSSSSCCEEESSTTTTTTTBCBEE
T ss_pred CceEEEEEECCCCceEecccCceEEEEEEEEeCCEEEEEEecCCCCCceEEEEEEeCCCCCCCceeccCccCCCCCceEE
Confidence 5 466667542 34455555555554332 78877776655 8889998753 311111111000002345677
Q ss_pred EEEeC--CeEE-EEeCC--CeEEEEEec
Q 008820 515 LLYWQ--GKLF-VGCAD--RTVKIALCN 537 (552)
Q Consensus 515 l~~~~--~~l~-s~s~D--g~v~iw~~~ 537 (552)
+.|++ +.++ +++.+ ..+.+|++.
T Consensus 415 ~~~s~dg~~l~~~~s~~~~p~~~l~d~~ 442 (719)
T 1z68_A 415 ASFSDYAKYYALVCYGPGIPISTLHDGR 442 (719)
T ss_dssp EEECGGGSSEEEEECCBSSCEEEEECSS
T ss_pred EEECCCCCEEEEEcCCCCCCeEEEEECC
Confidence 88884 3344 44443 567888875
No 180
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=99.61 E-value=4.4e-17 Score=169.14 Aligned_cols=112 Identities=22% Similarity=0.205 Sum_probs=78.4
Q ss_pred hhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cch
Q 008820 14 AKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFT 90 (552)
Q Consensus 14 ~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~ 90 (552)
.|+. |+|+.+..... +...+|||.|||||++ .| ..++.++|||||||+|||||+|+ ||.
T Consensus 296 vKl~DFG~a~~~~~~~~---~~~~~GT~~y~APEv~------~~---------~~y~~~~DiWSlGvilyeml~G~~Pf~ 357 (573)
T 3uto_A 296 LKLIDFGLTAHLDPKQS---VKVTTGTAEFAAPEVA------EG---------KPVGYYTDMWSVGVLSYILLSGLSPFG 357 (573)
T ss_dssp EEECCCSSCEECCTTSE---EEEECSSGGGCCHHHH------TT---------CCBCHHHHHHHHHHHHHHHHHSCCSSC
T ss_pred EEEeeccceeEccCCCc---eeeeEECccccCHHHh------CC---------CCCCcHHHHHHHHHHHHHHHHCCCCCC
Confidence 4555 88888776543 5678999999999999 33 45778999999999999999999 997
Q ss_pred HHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 91 KELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
+.+...+. ..+.......+.........++.+++.+||+++|.+||++.++.+
T Consensus 358 ~~~~~~~~-----------------~~i~~~~~~~~~~~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~ 410 (573)
T 3uto_A 358 GENDDETL-----------------RNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALE 410 (573)
T ss_dssp CSSHHHHH-----------------HHHHTTCCCCCSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred CcCHHHHH-----------------HHHHhCCCCCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 65433210 000000000111122233456889999999999999999887655
No 181
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.60 E-value=1.2e-12 Score=124.41 Aligned_cols=235 Identities=11% Similarity=0.191 Sum_probs=160.8
Q ss_pred ecCccceEEEEEc--CCEEEEEeCCCcEEEEeCCCCeEEEEEe------CCCCCeEEEEEecCCCCEEEEEcC-CCcEEE
Q 008820 249 QGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFK------GHDHKVMAVVYVDEDQPLCISGDS-GGGIFV 319 (552)
Q Consensus 249 ~~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~~~~~~~~------~h~~~v~~v~~~~~~~~~l~s~~~-dg~i~v 319 (552)
.+|-..+.+++++ ++++++.+.++.|++||.+ ++.+..+. +|...+..+++.+.++.++++... ++.|.+
T Consensus 26 ~g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~ 104 (286)
T 1q7f_A 26 EGQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQI 104 (286)
T ss_dssp TTCBSCEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEE
T ss_pred CCccCCCceEEECCCCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEE
Confidence 3566789999998 7888888889999999976 66666664 244678999996545556666543 899999
Q ss_pred EeCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCceeEEec--CCCCCeEEEEEe-CC-EE
Q 008820 320 WSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMS--GHKSAVSTLAVC-NG-VL 395 (552)
Q Consensus 320 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~--~h~~~v~~l~~~-~~-~l 395 (552)
||.. +... ..+..... ....-.++.++++.+++...++.|.+||. +++.+..+. .+...+.+++++ ++ ++
T Consensus 105 ~d~~-g~~~---~~~~~~~~-~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~p~~i~~~~~g~l~ 178 (286)
T 1q7f_A 105 YNQY-GQFV---RKFGATIL-QHPRGVTVDNKGRIIVVECKVMRVIIFDQ-NGNVLHKFGCSKHLEFPNGVVVNDKQEIF 178 (286)
T ss_dssp ECTT-SCEE---EEECTTTC-SCEEEEEECTTSCEEEEETTTTEEEEECT-TSCEEEEEECTTTCSSEEEEEECSSSEEE
T ss_pred ECCC-CcEE---EEecCccC-CCceEEEEeCCCCEEEEECCCCEEEEEcC-CCCEEEEeCCCCccCCcEEEEECCCCCEE
Confidence 9943 3222 22211111 11123467788888887778899999996 466666654 345678999999 45 55
Q ss_pred EEEeCCCcEEEEECCCCceeEEEecCC-CCceEEEEEEcCCCCEEEEEECCC-cEEEEeCC-cceeeeecccc--eEEEE
Q 008820 396 YSGSRDGTIRLWSLSDHSLLTVLEEDS-SGAVSSVLSLTAVQHTLVVSHESG-SIKVWRND-KFMKSMQTHKG--SVFAV 470 (552)
Q Consensus 396 ~s~~~dg~i~iwd~~~~~~~~~~~~~~-~~~~~~~~~~s~~~~~l~~g~~dg-~i~iwd~~-~~~~~~~~h~~--~v~~v 470 (552)
++...++.|++||. +++.+..+.... ..... .++++++|+++++...++ .|.+||.. +.+..+..+.. .+.++
T Consensus 179 v~~~~~~~i~~~~~-~g~~~~~~~~~g~~~~p~-~i~~d~~G~l~v~~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~~i 256 (286)
T 1q7f_A 179 ISDNRAHCVKVFNY-EGQYLRQIGGEGITNYPI-GVGINSNGEILIADNHNNFNLTIFTQDGQLISALESKVKHAQCFDV 256 (286)
T ss_dssp EEEGGGTEEEEEET-TCCEEEEESCTTTSCSEE-EEEECTTCCEEEEECSSSCEEEEECTTSCEEEEEEESSCCSCEEEE
T ss_pred EEECCCCEEEEEcC-CCCEEEEEccCCccCCCc-EEEECCCCCEEEEeCCCCEEEEEECCCCCEEEEEcccCCCCcceeE
Confidence 55567899999997 456666664331 12333 378999999888887776 99999954 34555554432 35555
Q ss_pred Ee--cCCEEEEEeCCCeEEEEecCC
Q 008820 471 FL--EGKWLFTGGWDKTVSVQELAG 493 (552)
Q Consensus 471 ~~--~~~~l~sgs~dg~i~iwd~~~ 493 (552)
.+ +|+++++ +.|+.|++|++..
T Consensus 257 ~~~~~g~l~vs-~~~~~v~v~~~~~ 280 (286)
T 1q7f_A 257 ALMDDGSVVLA-SKDYRLYIYRYVQ 280 (286)
T ss_dssp EEETTTEEEEE-ETTTEEEEEECSC
T ss_pred EECCCCcEEEE-CCCCeEEEEEccc
Confidence 54 7776666 6799999999864
No 182
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.60 E-value=8.5e-13 Score=130.26 Aligned_cols=265 Identities=11% Similarity=0.055 Sum_probs=162.3
Q ss_pred EEEEEeCC--CcEEEEeC--CCCeEEE--EEe-CCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCC-CCCCCccccccc
Q 008820 264 FLFSSSFD--KSIHVWSL--KDFSHVH--TFK-GHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFS-FPLGHEPLKKWN 335 (552)
Q Consensus 264 ~l~s~s~d--g~I~iwd~--~~~~~~~--~~~-~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~-~~~~~~~~~~~~ 335 (552)
+++.|+.. +.|.+|++ .+++... ... .....+..++|+|++. ++++++.+ .|.+|++. +++... +....
T Consensus 4 ~~~vg~~~~~~~i~~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~spdg~-~l~~~~~~-~v~~~~~~~~g~~~~-~~~~~ 80 (365)
T 1jof_A 4 HLMIGTWTPPGAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERK-NIYGAAMK-KWSSFAVKSPTEIVH-EASHP 80 (365)
T ss_dssp EEEEEESSSSCEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSS-EEEEEEBT-EEEEEEEEETTEEEE-EEEEE
T ss_pred EEEEEEccCCCcEEEEEEECCCCCEEEeeEEccCCCCCCcEEEECCCCC-EEEEEccc-eEEEEEECCCCCEEE-eeEee
Confidence 45566653 46877764 5665432 221 2345678899999776 55677766 99999987 443211 11111
Q ss_pred cCCCceeeeEEEEeeCCCE--EEEee-------------CCCcEEEEECC-CCceeEEec----CCCCCeEEEEEe-CC-
Q 008820 336 EEKDWRYSGIHALTTSGRY--LYTGS-------------GDRTIKAWSLL-DGTLSCTMS----GHKSAVSTLAVC-NG- 393 (552)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~--l~sgs-------------~dg~i~iwd~~-~~~~~~~~~----~h~~~v~~l~~~-~~- 393 (552)
... .. ...+++|+++. +++++ .+|.+.+|++. +++....+. .+...+.+++|+ ++
T Consensus 81 ~~g--~~-~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~ 157 (365)
T 1jof_A 81 IGG--HP-RANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTET 157 (365)
T ss_dssp CCS--SG-GGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSS
T ss_pred cCC--CC-ccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCC
Confidence 000 01 11367888984 55553 68999999997 466554443 255678999999 44
Q ss_pred EEEEEe-CCCcEEEEECC-CCcee--EEEecCC-CCceEEEEEEcCCCCEEEEEEC-CCcEEEEeCC----cce---eee
Q 008820 394 VLYSGS-RDGTIRLWSLS-DHSLL--TVLEEDS-SGAVSSVLSLTAVQHTLVVSHE-SGSIKVWRND----KFM---KSM 460 (552)
Q Consensus 394 ~l~s~~-~dg~i~iwd~~-~~~~~--~~~~~~~-~~~~~~~~~~s~~~~~l~~g~~-dg~i~iwd~~----~~~---~~~ 460 (552)
+++++. .++.|++||+. +++.. ..+.... ...... ++|+|+|+++++++. ++.|.+|+.. +.. ..+
T Consensus 158 ~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~-~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~ 236 (365)
T 1jof_A 158 YLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRW-VAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSF 236 (365)
T ss_dssp EEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEE-EEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEE
T ss_pred EEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCE-eEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceE
Confidence 677665 46899999998 67653 2333211 222333 699999999988775 6899999742 221 112
Q ss_pred e-------cccc------eEEEEE---ecCCEEEEEeCC-C-----eEEEEecC-CCeeeeee--ccCCCcccCcceEEE
Q 008820 461 Q-------THKG------SVFAVF---LEGKWLFTGGWD-K-----TVSVQELA-GDEFEEDV--IPTGAIPCGSVITAL 515 (552)
Q Consensus 461 ~-------~h~~------~v~~v~---~~~~~l~sgs~d-g-----~i~iwd~~-~~~~~~~~--~~~~~~~~~~~v~~l 515 (552)
. +|.. .+..+. +||++|++++.+ + .|.+|++. ++++.... .... ......+
T Consensus 237 ~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~----~~~~~~~ 312 (365)
T 1jof_A 237 PLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTP----TSGGHSN 312 (365)
T ss_dssp ESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECS----SCCTTCC
T ss_pred EcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecC----CCCcccc
Confidence 1 2222 455555 489988877643 2 89999996 55543211 1100 1223445
Q ss_pred EEeC----C-eEEEEeC-CCeEEEEEecCC
Q 008820 516 LYWQ----G-KLFVGCA-DRTVKIALCNRQ 539 (552)
Q Consensus 516 ~~~~----~-~l~s~s~-Dg~v~iw~~~~~ 539 (552)
+|+| + .|++++. ++.|++|+++..
T Consensus 313 a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 313 AVSPCPWSDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp CEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred eecCCCcCCCEEEEEEcCCCeEEEEEEchh
Confidence 6665 3 5777776 499999999854
No 183
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.60 E-value=5.2e-13 Score=131.81 Aligned_cols=244 Identities=11% Similarity=0.106 Sum_probs=157.5
Q ss_pred CccceEEEEEc--CCEEEEEeCCCcEEEEeCC-CCeEEEEEeC-CCCCeEEEEEecCCCC-EEEEEc-------------
Q 008820 251 HRDCVTGLAVG--GGFLFSSSFDKSIHVWSLK-DFSHVHTFKG-HDHKVMAVVYVDEDQP-LCISGD------------- 312 (552)
Q Consensus 251 H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~-~~~~~~~~~~-h~~~v~~v~~~~~~~~-~l~s~~------------- 312 (552)
+...+..++|+ +++|++++.+ .|.+|++. +++....... ..+.+..++|+|++.. ++++++
T Consensus 38 ~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~ 116 (365)
T 1jof_A 38 QDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYK 116 (365)
T ss_dssp TTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESS
T ss_pred CCCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccceeec
Confidence 44568889998 8889999888 99999997 7876544321 1123556889998775 345553
Q ss_pred CCCcEEEEeCCC-CCCCccccccccCCCceeeeEEEEeeCCCEEEEee-CCCcEEEEECC-CCcee--EEec--CCCCCe
Q 008820 313 SGGGIFVWSFSF-PLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGS-GDRTIKAWSLL-DGTLS--CTMS--GHKSAV 385 (552)
Q Consensus 313 ~dg~i~vwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs-~dg~i~iwd~~-~~~~~--~~~~--~h~~~v 385 (552)
.+|.+.+|+++. +.....+........ ......+++|+|++++++. .++.|++||+. +++.. ..+. .|...+
T Consensus 117 ~~g~v~v~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p 195 (365)
T 1jof_A 117 FAGYGNVFSVSETGKLEKNVQNYEYQEN-TGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHP 195 (365)
T ss_dssp SCCEEEEEEECTTCCEEEEEEEEECCTT-CCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCE
T ss_pred CCceEEEEccCCCCcCcceEeeEEeCCC-CcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCC
Confidence 689999999974 322222222110111 1122347899999887765 46899999998 77653 2333 246678
Q ss_pred EEEEEe-CC-EEEEEeC-CCcEEEEECC--CCcee---EEEecCCC---C-c-------eEEEEE-EcCCCCEEEEEECC
Q 008820 386 STLAVC-NG-VLYSGSR-DGTIRLWSLS--DHSLL---TVLEEDSS---G-A-------VSSVLS-LTAVQHTLVVSHES 445 (552)
Q Consensus 386 ~~l~~~-~~-~l~s~~~-dg~i~iwd~~--~~~~~---~~~~~~~~---~-~-------~~~~~~-~s~~~~~l~~g~~d 445 (552)
..++|+ ++ ++++++. +++|.+|++. +++.. ..+..... + . ....++ ++|||++|++++.+
T Consensus 196 ~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~ 275 (365)
T 1jof_A 196 RWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRA 275 (365)
T ss_dssp EEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEE
T ss_pred CEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCC
Confidence 999999 44 7777664 7899999875 56543 22322111 1 1 233368 99999998877643
Q ss_pred C------cEEEEeCCc--ceee----eeccc--ceEEEEEe---cCCEEEEEeCC-CeEEEEecCCCee
Q 008820 446 G------SIKVWRNDK--FMKS----MQTHK--GSVFAVFL---EGKWLFTGGWD-KTVSVQELAGDEF 496 (552)
Q Consensus 446 g------~i~iwd~~~--~~~~----~~~h~--~~v~~v~~---~~~~l~sgs~d-g~i~iwd~~~~~~ 496 (552)
. .|.+|++.. .+.. ...+. ..-.++++ +|++|++++.+ +.|++|++....+
T Consensus 276 ~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~~l 344 (365)
T 1jof_A 276 NKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDEFL 344 (365)
T ss_dssp SSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETTEE
T ss_pred CCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEchhhC
Confidence 2 899998641 2221 22222 22245677 79999999875 8999999976633
No 184
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.60 E-value=8.3e-13 Score=129.18 Aligned_cols=249 Identities=9% Similarity=-0.003 Sum_probs=158.6
Q ss_pred CCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCC--Cc--EEEEeCCCCCCCccccccccCCCceeeeEE
Q 008820 271 DKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSG--GG--IFVWSFSFPLGHEPLKKWNEEKDWRYSGIH 346 (552)
Q Consensus 271 dg~I~iwd~~~~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~d--g~--i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (552)
++.|.+||+.+++... + ..+..++|+|++..++++...+ +. |.+||+.++....... . . . ....
T Consensus 42 ~~~l~~~d~~~~~~~~-l----~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~---~-~--~-~~~~ 109 (347)
T 2gop_A 42 ENTIVIENLKNNARRF-I----ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILE---A-K--N-IRSL 109 (347)
T ss_dssp EEEEEEEETTTCCEEE-E----ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEE---E-S--E-EEEE
T ss_pred cceEEEEeCCCCceEE-c----ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEc---C-C--C-ccce
Confidence 5679999999887543 3 5688999999888665554432 33 7777876543221111 1 1 1 2345
Q ss_pred EEeeCCCEEEEeeCC---------------------------CcEEEEECCCCceeEEecCCCCCeEEEEEe-CCEEEEE
Q 008820 347 ALTTSGRYLYTGSGD---------------------------RTIKAWSLLDGTLSCTMSGHKSAVSTLAVC-NGVLYSG 398 (552)
Q Consensus 347 ~~~~~~~~l~sgs~d---------------------------g~i~iwd~~~~~~~~~~~~h~~~v~~l~~~-~~~l~s~ 398 (552)
.++|+++.|+.++.+ ..|++||+.+++.+..+.. . .+..+.|+ +++++++
T Consensus 110 ~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~spdg~~~~~ 187 (347)
T 2gop_A 110 EWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWHRDKIVVNV 187 (347)
T ss_dssp EECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEETTEEEEEE
T ss_pred eECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-C-CcccccCCCCeEEEEE
Confidence 788999988877632 5799999998887455544 3 78899999 4466666
Q ss_pred eCCC-------cEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEECC--------CcEEEEeCCcceeeeecc
Q 008820 399 SRDG-------TIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHES--------GSIKVWRNDKFMKSMQTH 463 (552)
Q Consensus 399 ~~dg-------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~d--------g~i~iwd~~~~~~~~~~h 463 (552)
..++ ...+|.+.+++. ..+..+ ... ..++|+|+.|+.++.+ ..|++||.++.......|
T Consensus 188 ~~~~~~~~~~~~~~l~~~d~~~~-~~l~~~--~~~---~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~l~~~~ 261 (347)
T 2gop_A 188 PHREIIPQYFKFWDIYIWEDGKE-EKMFEK--VSF---YAVDSDGERILLYGKPEKKYMSEHNKLYIYDGKEVMGILDEV 261 (347)
T ss_dssp ECCCSSCCSSCCEEEEEEETTEE-EEEEEE--ESE---EEEEECSSCEEEEECCSSSCCCSSCEEEEECSSCEEESSTTC
T ss_pred ecccccccccccccEEEeCCCce-EEeccC--cce---eeECCCCCEEEEEEccccCCccccceEEEECCCceEeccccC
Confidence 5542 344444445443 333322 222 2349999988877754 468888822333334456
Q ss_pred cceEEE-EEe-cCCEEEEEeCCCeEEEEecCCCeeeeeeccCCCcccCcceEEEEEeCCeEEEEeCCCeE-EEEEecCCc
Q 008820 464 KGSVFA-VFL-EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQGKLFVGCADRTV-KIALCNRQI 540 (552)
Q Consensus 464 ~~~v~~-v~~-~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~l~s~s~Dg~v-~iw~~~~~~ 540 (552)
...+.. +.| ++ .+++++.++.+++| +.+++...... ....|.+++|++..+++++.++.. .+|.++ +
T Consensus 262 ~~~~~~~~~~sdg-~~~~~~~~~~~~l~-~~~g~~~~~~~------~~~~v~~~~~s~~~~~~~~~~~~~~~l~~~~--g 331 (347)
T 2gop_A 262 DRGVGQAKIKDGK-VYFTLFEEGSVNLY-IWDGEIKPIAK------GRHWIMGFDVDEIVVYLKETATRLRELFTWD--G 331 (347)
T ss_dssp CSEEEEEEEETTE-EEEEEEETTEEEEE-EESSSEEEEEC------SSSEEEEEEESSSEEEEEECSSSCCEEEEES--S
T ss_pred CcccCCccEEcCc-EEEEEecCCcEEEE-EcCCceEEEec------CCCeEEeeeeeCcEEEEEcCCCChHHheEeC--C
Confidence 677775 666 56 88899999999999 87544322221 145688999999336677777765 888887 2
Q ss_pred ceeEEEeccc
Q 008820 541 PEIFSLLLHI 550 (552)
Q Consensus 541 ~~~~~~~gh~ 550 (552)
...++..|.
T Consensus 332 -~~~~lt~~n 340 (347)
T 2gop_A 332 -EEKQLTDYN 340 (347)
T ss_dssp -SEEECCCTT
T ss_pred -cEEEecccc
Confidence 355565553
No 185
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=99.60 E-value=4.9e-16 Score=151.79 Aligned_cols=45 Identities=31% Similarity=0.421 Sum_probs=36.6
Q ss_pred hhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cch
Q 008820 32 LSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFT 90 (552)
Q Consensus 32 ~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~ 90 (552)
++..+|||.|||||++ .| ...++.++|||||||+|||||||+ ||.
T Consensus 203 ~~~~~GT~~Y~APE~l------~~--------~~~y~~~~DiWSlG~il~ell~G~~Pf~ 248 (361)
T 4f9c_A 203 VAPRAGTPGFRAPEVL------TK--------CPNQTTAIDMWSAGVIFLSLLSGRYPFY 248 (361)
T ss_dssp ---CCCCGGGCCHHHH------TT--------CSCCCTHHHHHHHHHHHHHHHHTCSSSS
T ss_pred ccccccCccccCHHHH------cC--------CCCCCCccchhhhHHHHHHHHHCCCCCC
Confidence 4567899999999999 33 234678999999999999999999 993
No 186
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.58 E-value=1.3e-12 Score=126.92 Aligned_cols=239 Identities=12% Similarity=0.080 Sum_probs=161.6
Q ss_pred cceEEEEEc--CCEEEEEeCC------------------------CcEEEEeCCCCeEEEEEe-CCCCCeEEEEEecCCC
Q 008820 253 DCVTGLAVG--GGFLFSSSFD------------------------KSIHVWSLKDFSHVHTFK-GHDHKVMAVVYVDEDQ 305 (552)
Q Consensus 253 ~~V~~l~~s--~~~l~s~s~d------------------------g~I~iwd~~~~~~~~~~~-~h~~~v~~v~~~~~~~ 305 (552)
+.+.+++++ |+++++.+.+ ++|.+||..+++.+..+. ++-.....+++.+++.
T Consensus 24 ~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g~ 103 (329)
T 3fvz_A 24 GQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDGN 103 (329)
T ss_dssp SCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTSC
T ss_pred CCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCCC
Confidence 557777777 6666666655 579999999999877665 3456789999998776
Q ss_pred CEEEEEcCCCcEEEEeCCCCC-CCccccccc--c--CCCceeeeEEEEee-CCCEEEEee-CCCcEEEEECCCCceeEEe
Q 008820 306 PLCISGDSGGGIFVWSFSFPL-GHEPLKKWN--E--EKDWRYSGIHALTT-SGRYLYTGS-GDRTIKAWSLLDGTLSCTM 378 (552)
Q Consensus 306 ~~l~s~~~dg~i~vwd~~~~~-~~~~~~~~~--~--~~~~~~~~~~~~~~-~~~~l~sgs-~dg~i~iwd~~~~~~~~~~ 378 (552)
++++...++.|++||.+... ....+.... . ........-.++++ +++.+++.+ .++.|++|| .+++.+..+
T Consensus 104 -l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~~~~ 181 (329)
T 3fvz_A 104 -YWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSGKFVTQW 181 (329)
T ss_dssp -EEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TTSCEEEEE
T ss_pred -EEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCCCEEEEe
Confidence 77888889999999976431 111111000 0 01111122347777 677777776 689999999 577777776
Q ss_pred cCC----------CCCeEEEEEe-C-C-EEEEEeCCCcEEEEECCCCceeEEEecCCCCceEEEEEEcC------CCCEE
Q 008820 379 SGH----------KSAVSTLAVC-N-G-VLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTA------VQHTL 439 (552)
Q Consensus 379 ~~h----------~~~v~~l~~~-~-~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~------~~~~l 439 (552)
... -.....++++ + + ++++...++.|++||..+++.+..+.....+.....++++| +++..
T Consensus 182 ~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~pg~~~~~~g~~~ 261 (329)
T 3fvz_A 182 GEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIPGFLFAVNGKPY 261 (329)
T ss_dssp CEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEETTEEEEEECCCC
T ss_pred ccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecCCEEEEeCCCEE
Confidence 422 2347899998 4 5 55566678899999999899888886443332333367888 33322
Q ss_pred EEEECCCcEEEEeCC--cceeee---ecccceEEEEEe--cCCEEEEEeCCCeEEEEecCC
Q 008820 440 VVSHESGSIKVWRND--KFMKSM---QTHKGSVFAVFL--EGKWLFTGGWDKTVSVQELAG 493 (552)
Q Consensus 440 ~~g~~dg~i~iwd~~--~~~~~~---~~h~~~v~~v~~--~~~~l~sgs~dg~i~iwd~~~ 493 (552)
++...+..|++||.. +.+..+ ..+......+++ +|..+++...++.|++|++..
T Consensus 262 v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 262 FGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLTE 322 (329)
T ss_dssp TTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEEE
T ss_pred eccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCCc
Confidence 233345589999954 445554 355666777776 787888888899999999864
No 187
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.57 E-value=5e-12 Score=120.03 Aligned_cols=242 Identities=10% Similarity=0.141 Sum_probs=156.4
Q ss_pred CCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCcccccccc-CCCceeeeEEEE-eeCCCEEEEeeC-CCcEEE
Q 008820 290 GHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNE-EKDWRYSGIHAL-TTSGRYLYTGSG-DRTIKA 366 (552)
Q Consensus 290 ~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~l~sgs~-dg~i~i 366 (552)
++-..+.++++.+++. ++++...++.|.+||.+. .....+..... ..........++ .++++.+++... ++.|.+
T Consensus 27 g~~~~p~~v~~~~~g~-l~v~~~~~~~i~~~d~~g-~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~ 104 (286)
T 1q7f_A 27 GQFTEPSGVAVNAQND-IIVADTNNHRIQIFDKEG-RFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQI 104 (286)
T ss_dssp TCBSCEEEEEECTTCC-EEEEEGGGTEEEEECTTS-CEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEE
T ss_pred CccCCCceEEECCCCC-EEEEECCCCEEEEECCCC-cEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEE
Confidence 3456789999988764 778888899999999762 22111111000 000011122344 345555555533 789999
Q ss_pred EECCCCceeEEec-CCCCCeEEEEEe-CC-EEEEEeCCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEE
Q 008820 367 WSLLDGTLSCTMS-GHKSAVSTLAVC-NG-VLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSH 443 (552)
Q Consensus 367 wd~~~~~~~~~~~-~h~~~v~~l~~~-~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~ 443 (552)
|| .+++.+..+. .+...+.+++++ ++ ++++...++.|.+||. +++.+..+...........++++++++++++..
T Consensus 105 ~d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~ 182 (286)
T 1q7f_A 105 YN-QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQ-NGNVLHKFGCSKHLEFPNGVVVNDKQEIFISDN 182 (286)
T ss_dssp EC-TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECT-TSCEEEEEECTTTCSSEEEEEECSSSEEEEEEG
T ss_pred EC-CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcC-CCCEEEEeCCCCccCCcEEEEECCCCCEEEEEC
Confidence 99 5777777664 344578899998 44 5566667899999996 466666664321222233479999999888777
Q ss_pred CCCcEEEEeCCc-ceeeeecc--cceEEEEEe--cCCEEEEEeCCC-eEEEEecCCCeeeeeeccCCCcccCcceEEEEE
Q 008820 444 ESGSIKVWRNDK-FMKSMQTH--KGSVFAVFL--EGKWLFTGGWDK-TVSVQELAGDEFEEDVIPTGAIPCGSVITALLY 517 (552)
Q Consensus 444 ~dg~i~iwd~~~-~~~~~~~h--~~~v~~v~~--~~~~l~sgs~dg-~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~ 517 (552)
.++.|++||... .+..+..+ ...+..+.+ +|+++++...++ .|++||..+. ....+..... ...+.++++
T Consensus 183 ~~~~i~~~~~~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~g~-~~~~~~~~~~---~~~~~~i~~ 258 (286)
T 1q7f_A 183 RAHCVKVFNYEGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQDGQ-LISALESKVK---HAQCFDVAL 258 (286)
T ss_dssp GGTEEEEEETTCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTTSC-EEEEEEESSC---CSCEEEEEE
T ss_pred CCCEEEEEcCCCCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCCCC-EEEEEcccCC---CCcceeEEE
Confidence 899999999643 34444333 345666665 788888887776 9999997654 3333322211 234678899
Q ss_pred eC-CeEEEEeCCCeEEEEEecCC
Q 008820 518 WQ-GKLFVGCADRTVKIALCNRQ 539 (552)
Q Consensus 518 ~~-~~l~s~s~Dg~v~iw~~~~~ 539 (552)
++ +.+++++.|+.|++|++...
T Consensus 259 ~~~g~l~vs~~~~~v~v~~~~~~ 281 (286)
T 1q7f_A 259 MDDGSVVLASKDYRLYIYRYVQL 281 (286)
T ss_dssp ETTTEEEEEETTTEEEEEECSCC
T ss_pred CCCCcEEEECCCCeEEEEEcccc
Confidence 84 66776688999999998743
No 188
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=99.56 E-value=6.5e-16 Score=155.74 Aligned_cols=115 Identities=19% Similarity=0.258 Sum_probs=79.0
Q ss_pred hhhhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-C
Q 008820 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (552)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-p 88 (552)
...|+. |+++.+..... ......|||.|||||++ . ...+++++|||||||+||+|++|+ |
T Consensus 150 ~~vkL~DFG~a~~~~~~~~--~~~~~~gt~~Y~APE~l------~---------~~~~~~~~DIwSlGvilyell~G~~P 212 (444)
T 3soa_A 150 AAVKLADFGLAIEVEGEQQ--AWFGFAGTPGYLSPEVL------R---------KDPYGKPVDLWACGVILYILLVGYPP 212 (444)
T ss_dssp CCEEECCCSSCBCCCTTCC--BCCCSCSCGGGCCHHHH------T---------TCCBCTHHHHHHHHHHHHHHHHSSCS
T ss_pred CcEEEccCceeEEecCCCc--eeecccCCcccCCHHHh------c---------CCCCCCccccHHHHHHHHHHHhCCCC
Confidence 345666 66766655433 25678999999999999 2 245778999999999999999999 9
Q ss_pred chHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 89 FTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 89 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
|.......+ ...+.......+.+.+.....++.+++.+||+.+|.+||++.++.+
T Consensus 213 f~~~~~~~~-----------------~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~ 267 (444)
T 3soa_A 213 FWDEDQHRL-----------------YQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALK 267 (444)
T ss_dssp CCCSSHHHH-----------------HHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred CCCccHHHH-----------------HHHHHhCCCCCCccccccCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 965443311 0111111111122222334556999999999999999999987765
No 189
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.55 E-value=1.2e-12 Score=128.83 Aligned_cols=262 Identities=8% Similarity=0.028 Sum_probs=172.4
Q ss_pred CCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCCEEEEEc---------CCCcEEEEeCCCCCCCccccccccCC-C
Q 008820 270 FDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGD---------SGGGIFVWSFSFPLGHEPLKKWNEEK-D 339 (552)
Q Consensus 270 ~dg~I~iwd~~~~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~---------~dg~i~vwd~~~~~~~~~~~~~~~~~-~ 339 (552)
.|+.|.+||..+++.+.++..+..+ .++|+|++..+.++.. .++.|.+||..+.+....+....... .
T Consensus 29 ~d~~v~v~D~~t~~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~ 106 (361)
T 2oiz_A 29 TESRVHVYDYTNGKFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQG 106 (361)
T ss_dssp GGCEEEEEETTTCCEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCB
T ss_pred ccCeEEEEECCCCeEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCcccccc
Confidence 4789999999999999998877665 8999998875555442 36789999988665444333221110 0
Q ss_pred ceeeeEEEEeeCCCEEEEeeC--CCcEEEEECCCCceeEE-ecCCCCCeEEEEEe-C--CEEEEEeCCCcEEEEECCC-C
Q 008820 340 WRYSGIHALTTSGRYLYTGSG--DRTIKAWSLLDGTLSCT-MSGHKSAVSTLAVC-N--GVLYSGSRDGTIRLWSLSD-H 412 (552)
Q Consensus 340 ~~~~~~~~~~~~~~~l~sgs~--dg~i~iwd~~~~~~~~~-~~~h~~~v~~l~~~-~--~~l~s~~~dg~i~iwd~~~-~ 412 (552)
.....-.+++++|++|+++.. +++|.+||+.+++.+.. +.. .. ...+.+. + ..+++.+.||.+.+|++.. +
T Consensus 107 g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~-~~-~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g 184 (361)
T 2oiz_A 107 LNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAA-AG-CWSVIPQPNRPRSFMTICGDGGLLTINLGEDG 184 (361)
T ss_dssp CCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGG-TT-EEEEEECTTSSSEEEEEETTSSEEEEEECTTS
T ss_pred CCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecC-CC-cceeEEcCCCCeeEEEECCCCcEEEEEECCCC
Confidence 011123578999999988864 68999999999998887 553 22 2223444 2 3788899999999999865 5
Q ss_pred ceeEEEec-----CCCCceEEEEEEcCCCCEEEEEECCCcEEEEeCCcc----eeeeec------------ccceEEEEE
Q 008820 413 SLLTVLEE-----DSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDKF----MKSMQT------------HKGSVFAVF 471 (552)
Q Consensus 413 ~~~~~~~~-----~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~~~----~~~~~~------------h~~~v~~v~ 471 (552)
+....... ....... +.+++++..++..+.++.|+++|.... ...+.. .......++
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~ 262 (361)
T 2oiz_A 185 KVASQSRSKQMFSVKDDPIF--IAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLH 262 (361)
T ss_dssp SEEEEEECCCCSCTTTSCBC--SCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEE
T ss_pred cEeeeccccceEcCCCCceE--EEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEe
Confidence 54422210 0011111 234677777777788999999996421 111110 111124566
Q ss_pred ecCCEEEEEeC-----------CCeEEEEecCCCeeeeeeccCCCcccCcceEEEEEeC--CeEEEEeCCCeEEEEEecC
Q 008820 472 LEGKWLFTGGW-----------DKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQ--GKLFVGCADRTVKIALCNR 538 (552)
Q Consensus 472 ~~~~~l~sgs~-----------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~~--~~l~s~s~Dg~v~iw~~~~ 538 (552)
++++.++.+.. ++.|.+||+.+.+....+.. .. +.+++|++ .+|++++. +.|.+||..
T Consensus 263 ~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~------~~-p~~ia~spdg~~l~v~n~-~~v~v~D~~- 333 (361)
T 2oiz_A 263 RASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPG------RD-ALSMTIDQQRNLMLTLDG-GNVNVYDIS- 333 (361)
T ss_dssp TTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEEC------TT-CCEEEEETTTTEEEEECS-SCEEEEECS-
T ss_pred cCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEec------CC-eeEEEECCCCCEEEEeCC-CeEEEEECC-
Confidence 78787776543 35899999999887766543 22 78899995 34777766 999999987
Q ss_pred Cc--ceeEEE
Q 008820 539 QI--PEIFSL 546 (552)
Q Consensus 539 ~~--~~~~~~ 546 (552)
+. +.+.++
T Consensus 334 t~~l~~~~~i 343 (361)
T 2oiz_A 334 QPEPKLLRTI 343 (361)
T ss_dssp SSSCEEEEEE
T ss_pred CCcceeeEEe
Confidence 44 555554
No 190
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=99.55 E-value=6.6e-16 Score=151.59 Aligned_cols=113 Identities=16% Similarity=0.177 Sum_probs=76.3
Q ss_pred hhhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cc
Q 008820 13 VAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QF 89 (552)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf 89 (552)
-.|+. |+++.+..... .....|||.|||||++ . ...++.++|||||||+||+|++|+ ||
T Consensus 157 ~vkl~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~------~---------~~~~~~~~DiwslGvil~~ll~g~~Pf 218 (361)
T 2yab_A 157 HIKLIDFGLAHEIEDGVE---FKNIFGTPEFVAPEIV------N---------YEPLGLEADMWSIGVITYILLSGASPF 218 (361)
T ss_dssp CEEECCCSSCEECCTTCC---CCCCCSCGGGCCHHHH------T---------TCCCCTHHHHHHHHHHHHHHHHSCCSS
T ss_pred CEEEEecCCceEcCCCCc---cccCCCCccEECchHH------c---------CCCCCccccHHHHHHHHHHHHhCCCCC
Confidence 35666 66766655432 5678899999999999 2 245678999999999999999999 99
Q ss_pred hHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 90 TKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
.+.+...+. ..+.......+...+......+.+++.+||..+|.+||++.++.+
T Consensus 219 ~~~~~~~~~-----------------~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 272 (361)
T 2yab_A 219 LGDTKQETL-----------------ANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALR 272 (361)
T ss_dssp CCSSHHHHH-----------------HHHHTTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred CCCCHHHHH-----------------HHHHhcCCCCCchhccCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 664433110 000000000011112234445899999999999999999877554
No 191
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.55 E-value=1.2e-11 Score=122.40 Aligned_cols=288 Identities=15% Similarity=0.091 Sum_probs=185.1
Q ss_pred eEEEeeCCCeEEEEEeecC---------ccce-EEEEEcCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEec
Q 008820 233 DLVNGLSKGNVKFKDLQGH---------RDCV-TGLAVGGGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVD 302 (552)
Q Consensus 233 ~~~~~~~~~~~~~~~l~~H---------~~~V-~~l~~s~~~l~s~s~dg~I~iwd~~~~~~~~~~~~h~~~v~~v~~~~ 302 (552)
.+..........+|.+... ...+ ..+...+..++.++.++.|..+|.++|+.+................
T Consensus 64 ~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~p~~~- 142 (376)
T 3q7m_A 64 LVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSEKAQVYALNTSDGTVAWQTKVAGEALSRPVVS- 142 (376)
T ss_dssp EEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEETTSEEEEEETTTCCEEEEEECSSCCCSCCEEE-
T ss_pred eEEEEEccCCceeeeecCccccccccccCcccccCceEeCCEEEEEcCCCEEEEEECCCCCEEEEEeCCCceEcCCEEE-
Confidence 3333333334456766542 1223 3344558889999999999999999999998877543322222222
Q ss_pred CCCCEEEEEcCCCcEEEEeCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCceeEEecCCC
Q 008820 303 EDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHK 382 (552)
Q Consensus 303 ~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~ 382 (552)
++ .++.++.++.|..+|..+++............... ........+..++.++.++.+..+|..+++.+.......
T Consensus 143 -~~-~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~--~~~~~~~~~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~ 218 (376)
T 3q7m_A 143 -DG-LVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLR--GESAPTTAFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQ 218 (376)
T ss_dssp -TT-EEEEECTTSEEEEEETTTCCEEEEEECCC-----C--CCCCCEEETTEEEECCTTTEEEEEETTTCCEEEEEECCC
T ss_pred -CC-EEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeec--CCCCcEEECCEEEEEcCCCEEEEEECCCCcEEEEEeccc
Confidence 22 66778889999999998776544332211100000 000111235678888999999999999999988775321
Q ss_pred CC----------e-EEEEEeCCEEEEEeCCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEECCCcEEEE
Q 008820 383 SA----------V-STLAVCNGVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVW 451 (552)
Q Consensus 383 ~~----------v-~~l~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iw 451 (552)
.. + ......++.++.++.++.+..+|.++++.+...... .... ...++..+++++.++.+..+
T Consensus 219 ~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~~w~~~~~---~~~~---~~~~~~~l~~~~~~g~l~~~ 292 (376)
T 3q7m_A 219 ATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRELG---SVND---FIVDGNRIYLVDQNDRVMAL 292 (376)
T ss_dssp -----------CCCCCCEEETTEEEEECTTSCEEEEETTTCCEEEEECCC---CEEE---EEEETTEEEEEETTCCEEEE
T ss_pred CCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCcEEeeccCC---CCCC---ceEECCEEEEEcCCCeEEEE
Confidence 10 1 122334788999999999999999999988776532 1222 22346788888899999999
Q ss_pred eCCcc--eeeeec-ccceEEEEEecCCEEEEEeCCCeEEEEecCCCeeeeeeccCCCcccCcceEEEEEeCCeEEEEeCC
Q 008820 452 RNDKF--MKSMQT-HKGSVFAVFLEGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQGKLFVGCAD 528 (552)
Q Consensus 452 d~~~~--~~~~~~-h~~~v~~v~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~l~s~s~D 528 (552)
|..+. ...... ...........+..|+.++.+|.|+++|..+++......... ..........++.|++++.|
T Consensus 293 d~~tG~~~w~~~~~~~~~~~~~~~~~~~l~v~~~~g~l~~~d~~tG~~~~~~~~~~----~~~~~~~~~~~~~l~v~~~~ 368 (376)
T 3q7m_A 293 TIDGGVTLWTQSDLLHRLLTSPVLYNGNLVVGDSEGYLHWINVEDGRFVAQQKVDS----SGFQTEPVAADGKLLIQAKD 368 (376)
T ss_dssp ETTTCCEEEEECTTTTSCCCCCEEETTEEEEECTTSEEEEEETTTCCEEEEEECCT----TCBCSCCEEETTEEEEEBTT
T ss_pred ECCCCcEEEeecccCCCcccCCEEECCEEEEEeCCCeEEEEECCCCcEEEEEecCC----CcceeCCEEECCEEEEEeCC
Confidence 96543 333321 122222333467889999999999999999988776554321 11122233458899999999
Q ss_pred CeEEEEE
Q 008820 529 RTVKIAL 535 (552)
Q Consensus 529 g~v~iw~ 535 (552)
|.|+.|+
T Consensus 369 G~l~~~~ 375 (376)
T 3q7m_A 369 GTVYSIT 375 (376)
T ss_dssp SCEEEEE
T ss_pred CEEEEEe
Confidence 9999987
No 192
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=99.54 E-value=3.5e-15 Score=145.22 Aligned_cols=126 Identities=12% Similarity=0.078 Sum_probs=84.6
Q ss_pred hhhcc--cccccccccchhh-----hhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhh
Q 008820 13 VAKVG--CVGSRICDKEVGL-----FLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI 85 (552)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~~-----~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~llt 85 (552)
.+|+. |+++.+....... ....+.||+.|||||++ .| ..++.++|||||||+||||++
T Consensus 148 ~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~------~~---------~~~~~~~Di~slG~il~ell~ 212 (330)
T 2izr_A 148 VIHIIDFALAKEYIDPETKKHIPYREHKSLTGTARYMSINTH------LG---------KEQSRRDDLEALGHMFMYFLR 212 (330)
T ss_dssp SEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHH------TT---------CCCCHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEcccceeeecCCCCccccccccCCcCCCccccChHHH------cC---------CCCCchhHHHHHHHHHHHHhc
Confidence 46777 6666554433210 13578999999999999 33 556789999999999999999
Q ss_pred CC-CchHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHHh
Q 008820 86 GE-QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRE 164 (552)
Q Consensus 86 g~-pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~~ 164 (552)
|+ ||.......+. .....+.......+........+++.+++.+|++.+|.+||+..++.+.+..
T Consensus 213 g~~Pf~~~~~~~~~--------------~~~~~i~~~~~~~~~~~~~~~~p~~~~li~~~l~~~p~~RP~~~~l~~~l~~ 278 (330)
T 2izr_A 213 GSLPWQGLKADTLK--------------ERYQKIGDTKRATPIEVLCENFPEMATYLRYVRRLDFFEKPDYDYLRKLFTD 278 (330)
T ss_dssp SSCTTTTCCCSSHH--------------HHHHHHHHHHHHSCHHHHTTTCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHH
T ss_pred CCCCccccccccHH--------------HHHHHHHhhhccCCHHHHhccChHHHHHHHHHHhCCCCCCCCHHHHHHHHHH
Confidence 99 99763322110 1111222211111222222233479999999999999999999999998887
Q ss_pred hhc
Q 008820 165 LII 167 (552)
Q Consensus 165 ~~~ 167 (552)
+..
T Consensus 279 ~~~ 281 (330)
T 2izr_A 279 LFD 281 (330)
T ss_dssp HHH
T ss_pred HHH
Confidence 753
No 193
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=99.53 E-value=5.3e-15 Score=141.55 Aligned_cols=129 Identities=10% Similarity=0.046 Sum_probs=85.4
Q ss_pred hhhhhhcc--cccccccccchh-----hhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhh
Q 008820 10 TKSVAKVG--CVGSRICDKEVG-----LFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLS 82 (552)
Q Consensus 10 ~~~~~~~~--~~~~~~~~~~~~-----~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~ 82 (552)
.....|++ |+++.+...... .......||+.|||||++ .+ ..+++++|||||||+|||
T Consensus 143 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~------~~---------~~~~~~~Di~slG~il~~ 207 (296)
T 3uzp_A 143 KGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTH------LG---------IEQSRRDDLESLGYVLMY 207 (296)
T ss_dssp GTTCEEECCCTTCEECBCTTTCCBCCCCCSCCCCSCTTTCCHHHH------TT---------CCCCHHHHHHHHHHHHHH
T ss_pred CCCeEEEeeCCCcccccccccccccccccccccccccccCChhhh------cC---------CCCCcchhhHHHHHHHHH
Confidence 34456676 556555544321 013577899999999999 33 456789999999999999
Q ss_pred hhhCC-CchHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHh-hhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 83 LLIGE-QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLE-NKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 83 lltg~-pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
|++|+ ||....... .. .............+. ........++.+++.+||+.+|.+||++.++.+
T Consensus 208 l~~g~~pf~~~~~~~-----~~---------~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~ 273 (296)
T 3uzp_A 208 FNLGSLPWQGLKAAT-----KR---------QKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQ 273 (296)
T ss_dssp HHHSSCTTSSCCCSS-----SS---------SHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHH
T ss_pred HHhCCCCCCCcCchh-----hh---------hhhhhhcccccCCchHHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHH
Confidence 99999 997632220 00 001111121111111 111234456999999999999999999999999
Q ss_pred HHHhhhc
Q 008820 161 CIRELII 167 (552)
Q Consensus 161 ~l~~~~~ 167 (552)
.+..+..
T Consensus 274 ~l~~~~~ 280 (296)
T 3uzp_A 274 LFRNLFH 280 (296)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9988763
No 194
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=99.53 E-value=1.3e-15 Score=147.86 Aligned_cols=113 Identities=16% Similarity=0.197 Sum_probs=75.4
Q ss_pred hhhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cc
Q 008820 13 VAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QF 89 (552)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf 89 (552)
-.|+. |+++.+..... .....||+.|||||++ . ...++.++|||||||+||+|++|+ ||
T Consensus 156 ~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~------~---------~~~~~~~~DiwslG~il~~ll~g~~pf 217 (326)
T 2y0a_A 156 RIKIIDFGLAHKIDFGNE---FKNIFGTPEFVAPEIV------N---------YEPLGLEADMWSIGVITYILLSGASPF 217 (326)
T ss_dssp CEEECCCTTCEECCTTSC---CCCCCSCTTTCCHHHH------T---------TCCCCTHHHHHHHHHHHHHHHHSCCSS
T ss_pred CEEEEECCCCeECCCCCc---cccccCCcCcCCceee------c---------CCCCCcHHHHHHHHHHHHHHHHCcCCC
Confidence 45666 56666543322 5677899999999998 2 255678999999999999999999 99
Q ss_pred hHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 90 TKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
.+.....+. ..........+..........+.+++.+||+.+|.+||++.++.+
T Consensus 218 ~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 271 (326)
T 2y0a_A 218 LGDTKQETL-----------------ANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271 (326)
T ss_dssp CCSSHHHHH-----------------HHHHHTCCCCCHHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred CCCCHHHHH-----------------HHHHhcCCCcCccccccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 654332110 000000000011111223445889999999999999999888765
No 195
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=99.53 E-value=6.1e-15 Score=141.15 Aligned_cols=130 Identities=10% Similarity=0.044 Sum_probs=85.7
Q ss_pred hhhhhhhcc--cccccccccchh-----hhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhh
Q 008820 9 VTKSVAKVG--CVGSRICDKEVG-----LFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILL 81 (552)
Q Consensus 9 ~~~~~~~~~--~~~~~~~~~~~~-----~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~ 81 (552)
......|+. |+++.+...... .......||+.|||||++ .+ ..+++++|||||||+||
T Consensus 142 ~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~------~~---------~~~~~~~Di~slG~il~ 206 (296)
T 4hgt_A 142 KKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTH------LG---------IEQSRRDDLESLGYVLM 206 (296)
T ss_dssp GGTTCEEECCCTTCEECBCTTTCCBCCCCCSCCCCSCGGGCCHHHH------TT---------CCCCHHHHHHHHHHHHH
T ss_pred CCCCeEEEecCccceeccCcccCccCCCCcccccCCCccccchHHh------cC---------CCCCchhHHHHHHHHHH
Confidence 344456666 556555443221 123467899999999999 32 45678999999999999
Q ss_pred hhhhCC-CchHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhh-hhcCccccHHHHHHhhcccCCCCCcchhhHH
Q 008820 82 SLLIGE-QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLEN-KFGSEFVSLQLMFCQCLNFDPGCRPLLTNVW 159 (552)
Q Consensus 82 ~lltg~-pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~ 159 (552)
+|++|+ ||........ . .............+.. .......++.+++.+||+.+|.+||++.++.
T Consensus 207 ~l~~g~~pf~~~~~~~~-----~---------~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~ 272 (296)
T 4hgt_A 207 YFNLGSLPWQGLKAATK-----R---------QKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLR 272 (296)
T ss_dssp HHHHSSCTTSSCCCSSS-----S---------SHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHH
T ss_pred HHhcCCCCCcccchhhh-----h---------hhhhhhhcccccchhhhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHH
Confidence 999999 9976332200 0 0011111111111111 1122345699999999999999999999999
Q ss_pred HHHHhhhc
Q 008820 160 KCIRELII 167 (552)
Q Consensus 160 ~~l~~~~~ 167 (552)
+.+..+..
T Consensus 273 ~~l~~~~~ 280 (296)
T 4hgt_A 273 QLFRNLFH 280 (296)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99988764
No 196
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.52 E-value=1.5e-11 Score=121.80 Aligned_cols=274 Identities=11% Similarity=0.079 Sum_probs=183.3
Q ss_pred EEEcCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCC---------CCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCC
Q 008820 258 LAVGGGFLFSSSFDKSIHVWSLKDFSHVHTFKGHD---------HKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGH 328 (552)
Q Consensus 258 l~~s~~~l~s~s~dg~I~iwd~~~~~~~~~~~~h~---------~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~ 328 (552)
....+..++.++.++.|..+|.++++.+..+.... ..+.+..... ++ .++.++.++.|..+|..+++..
T Consensus 49 p~v~~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~v~v~~~~g~l~a~d~~tG~~~ 126 (376)
T 3q7m_A 49 PALADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVS-GG-HVYIGSEKAQVYALNTSDGTVA 126 (376)
T ss_dssp CEEETTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEE-TT-EEEEEETTSEEEEEETTTCCEE
T ss_pred cEEECCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccCceEe-CC-EEEEEcCCCEEEEEECCCCCEE
Confidence 34458888899999999999999999988876532 2332222222 33 5677888999999999887654
Q ss_pred ccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCe-----EEEEEeCCEEEEEeCCCc
Q 008820 329 EPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAV-----STLAVCNGVLYSGSRDGT 403 (552)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v-----~~l~~~~~~l~s~~~dg~ 403 (552)
......... ... ....+..+++++.++.|..+|..+|+.+.......... ......++.++.++.++.
T Consensus 127 W~~~~~~~~---~~~----p~~~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~g~ 199 (376)
T 3q7m_A 127 WQTKVAGEA---LSR----PVVSDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTAFGAAVVGGDNGR 199 (376)
T ss_dssp EEEECSSCC---CSC----CEEETTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEETTEEEECCTTTE
T ss_pred EEEeCCCce---EcC----CEEECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEECCEEEEEcCCCE
Confidence 333221110 001 11235578888899999999999999988876433221 233444778899999999
Q ss_pred EEEEECCCCceeEEEecCCCCc---------eEEEEEEcCCCCEEEEEECCCcEEEEeCCcceeeeecccceEEEEEecC
Q 008820 404 IRLWSLSDHSLLTVLEEDSSGA---------VSSVLSLTAVQHTLVVSHESGSIKVWRNDKFMKSMQTHKGSVFAVFLEG 474 (552)
Q Consensus 404 i~iwd~~~~~~~~~~~~~~~~~---------~~~~~~~s~~~~~l~~g~~dg~i~iwd~~~~~~~~~~h~~~v~~v~~~~ 474 (552)
+..+|..+++.+.......... +...... .+..+++++.++.+..+|..+....+.........+..++
T Consensus 200 l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~--~~~~v~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~ 277 (376)
T 3q7m_A 200 VSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVV--VNGVVFALAYNGNLTALDLRSGQIMWKRELGSVNDFIVDG 277 (376)
T ss_dssp EEEEETTTCCEEEEEECCC-----------CCCCCCEE--ETTEEEEECTTSCEEEEETTTCCEEEEECCCCEEEEEEET
T ss_pred EEEEECCCCcEEEEEecccCCCCcccccccccCCCcEE--ECCEEEEEecCcEEEEEECCCCcEEeeccCCCCCCceEEC
Confidence 9999999999988776432110 0000011 2567888888999999997543333333334445566678
Q ss_pred CEEEEEeCCCeEEEEecCCCeeeeeeccCCCcccCcceEEEEEeCCeEEEEeCCCeEEEEEecCCcceeEEEe
Q 008820 475 KWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQGKLFVGCADRTVKIALCNRQIPEIFSLL 547 (552)
Q Consensus 475 ~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~l~s~s~Dg~v~iw~~~~~~~~~~~~~ 547 (552)
..++.++.++.|..+|..+++......... ...+......++.+++++.+|.|+++|.. ++..+.++.
T Consensus 278 ~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~----~~~~~~~~~~~~~l~v~~~~g~l~~~d~~-tG~~~~~~~ 345 (376)
T 3q7m_A 278 NRIYLVDQNDRVMALTIDGGVTLWTQSDLL----HRLLTSPVLYNGNLVVGDSEGYLHWINVE-DGRFVAQQK 345 (376)
T ss_dssp TEEEEEETTCCEEEEETTTCCEEEEECTTT----TSCCCCCEEETTEEEEECTTSEEEEEETT-TCCEEEEEE
T ss_pred CEEEEEcCCCeEEEEECCCCcEEEeecccC----CCcccCCEEECCEEEEEeCCCeEEEEECC-CCcEEEEEe
Confidence 889999999999999999988766554221 11233334457899999999999999987 455554443
No 197
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=99.52 E-value=1.2e-15 Score=150.08 Aligned_cols=113 Identities=19% Similarity=0.241 Sum_probs=76.3
Q ss_pred hhhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cc
Q 008820 13 VAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QF 89 (552)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf 89 (552)
..|+. |+++.+..... .....|||.|||||++ . ...+++++|||||||+||+|++|+ ||
T Consensus 169 ~~kl~DfG~a~~~~~~~~---~~~~~gt~~y~aPE~~------~---------~~~~~~~~DiwslG~il~~ll~g~~Pf 230 (362)
T 2bdw_A 169 AVKLADFGLAIEVNDSEA---WHGFAGTPGYLSPEVL------K---------KDPYSKPVDIWACGVILYILLVGYPPF 230 (362)
T ss_dssp CEEECCCTTCBCCTTCCS---CCCSCSCTTTCCHHHH------T---------TCCCCTHHHHHHHHHHHHHHHHSSCSS
T ss_pred CEEEeecCcceEecCCcc---cccCCCCccccCHHHH------c---------cCCCCchhhHHHHHHHHHHHHHCCCCC
Confidence 35666 66666655432 5678999999999999 2 245778999999999999999999 99
Q ss_pred hHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 90 TKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
.......+. ..+.......+...+.....++.+++.+||+.+|.+||++.++.+
T Consensus 231 ~~~~~~~~~-----------------~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 284 (362)
T 2bdw_A 231 WDEDQHRLY-----------------AQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALK 284 (362)
T ss_dssp CCSSHHHHH-----------------HHHHHTCCCCCTTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred CCCCHHHHH-----------------HHHHhCCCCCCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 654332110 001010001111122233456899999999999999999876654
No 198
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.52 E-value=1.4e-12 Score=141.23 Aligned_cols=271 Identities=7% Similarity=-0.016 Sum_probs=166.6
Q ss_pred ceEEEEEc--CCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCC-----eEEEEEecCCCCEEEEEcCC---------CcE
Q 008820 254 CVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHK-----VMAVVYVDEDQPLCISGDSG---------GGI 317 (552)
Q Consensus 254 ~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~~~~~~~~~h~~~-----v~~v~~~~~~~~~l~s~~~d---------g~i 317 (552)
...+++|+ +++++++ |++|++||+.++++...+.+|... ..++.|+|++..+ +.++.+ +.+
T Consensus 18 ~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l-~~~~~~~~~~r~~~~~~~ 94 (740)
T 4a5s_A 18 KLYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFI-LLEYNYVKQWRHSYTASY 94 (740)
T ss_dssp CCCCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEE-EEEEEEEECSSSCEEEEE
T ss_pred cccccEECCCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEE-EEEECCeeeEEEccceEE
Confidence 35578898 6777775 999999999999988888887643 2447889987754 555554 567
Q ss_pred EEEeCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCceeEE-ecCCCCCe-----------
Q 008820 318 FVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCT-MSGHKSAV----------- 385 (552)
Q Consensus 318 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~-~~~h~~~v----------- 385 (552)
.+||+.+++... + ..+.. .....+++|||+.|+.+. |+.|++||+.+++..+. ..++...+
T Consensus 95 ~~~d~~~~~~~~-l---~~~~~--~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~e 167 (740)
T 4a5s_A 95 DIYDLNKRQLIT-E---ERIPN--NTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEE 167 (740)
T ss_dssp EEEETTTTEECC-S---SCCCT--TEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHH
T ss_pred EEEECCCCcEEE-c---ccCCC--cceeeEECCCCCEEEEEE-CCeEEEEECCCCceEEEcCCCCccceecCcccccccc
Confidence 799999765332 1 11111 123458999999988885 68999999988875542 22333222
Q ss_pred ------EEEEEe-CC-EEEEEeCCC------------------------------------cEEEEECCC---Cc--eeE
Q 008820 386 ------STLAVC-NG-VLYSGSRDG------------------------------------TIRLWSLSD---HS--LLT 416 (552)
Q Consensus 386 ------~~l~~~-~~-~l~s~~~dg------------------------------------~i~iwd~~~---~~--~~~ 416 (552)
.++.|+ ++ .|+.++.|. +|++||+.+ ++ ...
T Consensus 168 e~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~ 247 (740)
T 4a5s_A 168 EVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSI 247 (740)
T ss_dssp HTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEE
T ss_pred hhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEE
Confidence 348899 44 777765332 488899988 73 222
Q ss_pred EEecC----CCCceEEEEEEcCCCCEEEEEEC----CCcEEEEeCCcc--------eeee--ecccceEE-------EEE
Q 008820 417 VLEED----SSGAVSSVLSLTAVQHTLVVSHE----SGSIKVWRNDKF--------MKSM--QTHKGSVF-------AVF 471 (552)
Q Consensus 417 ~~~~~----~~~~~~~~~~~s~~~~~l~~g~~----dg~i~iwd~~~~--------~~~~--~~h~~~v~-------~v~ 471 (552)
.+... .........+|+|||+.++.... +..|++||.... ...+ ..|...+. .++
T Consensus 248 ~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fs 327 (740)
T 4a5s_A 248 QITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFT 327 (740)
T ss_dssp EECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEEC
T ss_pred EecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEc
Confidence 33221 01223334689999997665533 236899985321 2222 44554433 344
Q ss_pred ecCCEEE-EEeC-C--CeEEEEecCCCeeeeeeccCCCcccCcceEEE-EEeCCeEE-EEeC----CCeEEEEEecCCc
Q 008820 472 LEGKWLF-TGGW-D--KTVSVQELAGDEFEEDVIPTGAIPCGSVITAL-LYWQGKLF-VGCA----DRTVKIALCNRQI 540 (552)
Q Consensus 472 ~~~~~l~-sgs~-d--g~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l-~~~~~~l~-s~s~----Dg~v~iw~~~~~~ 540 (552)
+||+.++ ..+. + ..|++||+.++........ ...+..+ .++++.++ +++. .+..+||.++..+
T Consensus 328 pDG~~l~~~~s~~~G~~~l~~~~~~~~~~~~lT~g------~~~v~~~~~~d~~~i~f~~~~~~~~~~~~~ly~v~~~g 400 (740)
T 4a5s_A 328 LDGNSFYKIISNEEGYRHICYFQIDKKDCTFITKG------TWEVIGIEALTSDYLYYISNEYKGMPGGRNLYKIQLID 400 (740)
T ss_dssp TTSSEEEEEEECTTSCEEEEEEETTCSSCEESCCS------SSCEEEEEEECSSEEEEEESCGGGCTTCBEEEEEETTE
T ss_pred CCCCEEEEEEEcCCCceEEEEEECCCCceEecccC------CEEEEEEEEEeCCEEEEEEecCCCCCceeEEEEEECCC
Confidence 5999877 6664 3 3688889887655433222 2224433 35555544 4443 3556777665433
No 199
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.52 E-value=2.2e-12 Score=128.41 Aligned_cols=292 Identities=7% Similarity=-0.016 Sum_probs=171.8
Q ss_pred EEEEeecCccc-----eEEEEEc--CCEEEEEeCC---CcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCCEEEEEcC
Q 008820 244 KFKDLQGHRDC-----VTGLAVG--GGFLFSSSFD---KSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDS 313 (552)
Q Consensus 244 ~~~~l~~H~~~-----V~~l~~s--~~~l~s~s~d---g~I~iwd~~~~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~ 313 (552)
.+..+..+... +.+++|+ |++|+.+..+ ..|.+||+.+++......++......+.|+|++. .|+.++.
T Consensus 22 ~~~~l~~~~~~~~~~~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~-~l~~~~~ 100 (396)
T 3c5m_A 22 KVTRLTPTDIICHRNYFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDER-AFFYVKN 100 (396)
T ss_dssp EEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTSS-EEEEEET
T ss_pred ceEEEecCCCCccceeeecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCCC-EEEEEEc
Confidence 34555554333 6778888 8887776543 4688899988876554433333333478999776 5566777
Q ss_pred CCcEEEEeCCCCCCCccccccccCCCceee-e-E---------------EEEeeCCCEEEEe-----eCCCcEEEEECCC
Q 008820 314 GGGIFVWSFSFPLGHEPLKKWNEEKDWRYS-G-I---------------HALTTSGRYLYTG-----SGDRTIKAWSLLD 371 (552)
Q Consensus 314 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~-~-~---------------~~~~~~~~~l~sg-----s~dg~i~iwd~~~ 371 (552)
++.|++||+.++....... .+..+... . + ..++|+++.++.+ ..+..|++||+.+
T Consensus 101 ~~~l~~~d~~~~~~~~~~~---~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~ 177 (396)
T 3c5m_A 101 ELNLMKVDLETLEEQVIYT---VDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIET 177 (396)
T ss_dssp TTEEEEEETTTCCEEEEEE---CCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTT
T ss_pred CCcEEEEECCCCCcEEEEe---cccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCC
Confidence 7899999998654322111 11111100 0 0 1345566654443 4567899999998
Q ss_pred CceeEEecCCCCCeEEEEEeC--C-EEEEEeCC------CcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEE
Q 008820 372 GTLSCTMSGHKSAVSTLAVCN--G-VLYSGSRD------GTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVS 442 (552)
Q Consensus 372 ~~~~~~~~~h~~~v~~l~~~~--~-~l~s~~~d------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g 442 (552)
++..... .+...+..+.|++ + .|+..+.+ ..|.+||+..++.. .+..+..........|+|+|+.|+.+
T Consensus 178 g~~~~~~-~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~-~l~~~~~~~~~~~~~~spdg~~l~~~ 255 (396)
T 3c5m_A 178 GELEVIH-QDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVR-KIKEHAEGESCTHEFWIPDGSAMAYV 255 (396)
T ss_dssp CCEEEEE-EESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCE-ESSCCCTTEEEEEEEECTTSSCEEEE
T ss_pred CcEEeec-cCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCcee-EeeccCCCccccceEECCCCCEEEEE
Confidence 8766554 4667789999985 3 56655543 46889998765533 23222112233346899999987776
Q ss_pred ECC-----CcEEEEeCCcc-eeeeecccceEEEEEe-cCCEEEEEe----------------CCCeEEEEecCCCeeeee
Q 008820 443 HES-----GSIKVWRNDKF-MKSMQTHKGSVFAVFL-EGKWLFTGG----------------WDKTVSVQELAGDEFEED 499 (552)
Q Consensus 443 ~~d-----g~i~iwd~~~~-~~~~~~h~~~v~~v~~-~~~~l~sgs----------------~dg~i~iwd~~~~~~~~~ 499 (552)
+.+ +.|++||+... ...+.........+++ +|+++++++ .+..|++||+.+++....
T Consensus 256 ~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l 335 (396)
T 3c5m_A 256 SYFKGQTDRVIYKANPETLENEEVMVMPPCSHLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQKL 335 (396)
T ss_dssp EEETTTCCEEEEEECTTTCCEEEEEECCSEEEEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBCCEE
T ss_pred ecCCCCccceEEEEECCCCCeEEeeeCCCCCCCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCceEEc
Confidence 543 44999996532 2222211111145566 899888765 347899999988765433
Q ss_pred eccCCCc-----ccCcceEEEEEeC-C-eEEEEe-CCCeEEEEEecCCcc
Q 008820 500 VIPTGAI-----PCGSVITALLYWQ-G-KLFVGC-ADRTVKIALCNRQIP 541 (552)
Q Consensus 500 ~~~~~~~-----~~~~~v~~l~~~~-~-~l~s~s-~Dg~v~iw~~~~~~~ 541 (552)
....... .....+..++|++ + .|+.++ .++...+|.++....
T Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~~~~~~ 385 (396)
T 3c5m_A 336 CKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYIADVPES 385 (396)
T ss_dssp EECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEECCTT
T ss_pred cCCCCccccccccccCCCCCceEccCCCeEEEEecCCCCceEEEEEEccc
Confidence 2221100 0000244567774 3 466555 467777777764333
No 200
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=99.51 E-value=7.4e-15 Score=140.72 Aligned_cols=126 Identities=10% Similarity=-0.034 Sum_probs=83.4
Q ss_pred hhhcc--cccccccccchh-----hhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhh
Q 008820 13 VAKVG--CVGSRICDKEVG-----LFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI 85 (552)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~-----~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~llt 85 (552)
.+|+. |+++.+...... .......||+.|||||++ .+ ..+++++|||||||+||||++
T Consensus 149 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~------~~---------~~~~~~~Di~slG~il~el~~ 213 (298)
T 1csn_A 149 MIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTH------LG---------REQSRRDDLEALGHVFMYFLR 213 (298)
T ss_dssp CEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHH------TT---------CCCCHHHHHHHHHHHHHHHHH
T ss_pred eEEEEECccccccccccccccccccCccCCCCCcccCCchhh------cC---------CCCChHHHHHHHHHHHHHHHc
Confidence 36666 556555543221 124677899999999998 32 456789999999999999999
Q ss_pred CC-CchHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHH-hhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHH
Q 008820 86 GE-QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLL-ENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIR 163 (552)
Q Consensus 86 g~-pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~ 163 (552)
|+ ||......... .............+ .........++.+++.+||+.+|.+||++.++.+.+.
T Consensus 214 g~~pf~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~ 279 (298)
T 1csn_A 214 GSLPWQGLKAATNK--------------QKYERIGEKKQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFS 279 (298)
T ss_dssp SSCTTSSCCSCCHH--------------HHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHH
T ss_pred CCCCcchhhccccH--------------HHHHHHHhhccCccHHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHH
Confidence 99 99763211000 00111111111111 1112234556999999999999999999999999988
Q ss_pred hhhc
Q 008820 164 ELII 167 (552)
Q Consensus 164 ~~~~ 167 (552)
++..
T Consensus 280 ~~~~ 283 (298)
T 1csn_A 280 KVLE 283 (298)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8763
No 201
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=99.51 E-value=5.4e-15 Score=143.25 Aligned_cols=109 Identities=20% Similarity=0.238 Sum_probs=74.6
Q ss_pred hhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cch
Q 008820 14 AKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFT 90 (552)
Q Consensus 14 ~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~ 90 (552)
.|+. |+++.+.... ......||+.|||||++ .| ....++++|||||||+||+|++|+ ||.
T Consensus 153 ~kl~DFG~a~~~~~~~---~~~~~~gt~~y~aPE~~------~~--------~~~~~~~~DiwslG~il~ell~g~~pf~ 215 (328)
T 3fe3_A 153 IKIADFGFSNEFTVGG---KLDAFCGAPPYAAPELF------QG--------KKYDGPEVDVWSLGVILYTLVSGSLPFD 215 (328)
T ss_dssp EEECSTTCCGGGSSSC---GGGTTSSSGGGCCHHHH------HT--------CCCCSHHHHHHHHHHHHHHHHHSSCSSC
T ss_pred EEEeeccCceecCCCC---ccccccCCcceeCcccc------cC--------CCcCCchhhhhhhHHHHHHHHhCCCCCC
Confidence 4555 5666555443 26778999999999999 22 122247899999999999999999 997
Q ss_pred HHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 91 KELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
+.+...+ ...+.............++.+++.+||+.+|.+||++.++.+
T Consensus 216 ~~~~~~~---------------------~~~i~~~~~~~p~~~s~~~~~li~~~L~~dP~~R~t~~eil~ 264 (328)
T 3fe3_A 216 GQNLKEL---------------------RERVLRGKYRIPFYMSTDCENLLKRFLVLNPIKRGTLEQIMK 264 (328)
T ss_dssp CSSHHHH---------------------HHHHHHCCCCCCTTSCHHHHHHHHHHCCSSTTTSCCHHHHTT
T ss_pred CCCHHHH---------------------HHHHHhCCCCCCCCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 7554421 111111111111123456899999999999999999887655
No 202
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=99.51 E-value=2.4e-15 Score=143.76 Aligned_cols=122 Identities=16% Similarity=0.213 Sum_probs=72.5
Q ss_pred hhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cch
Q 008820 14 AKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFT 90 (552)
Q Consensus 14 ~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~ 90 (552)
.|+. |+++.+..... .......||+.|||||++ .+ ..+++++|||||||+||+|+||+ ||.
T Consensus 150 ~kl~Dfg~~~~~~~~~~-~~~~~~~gt~~y~aPE~~------~~---------~~~~~~~Di~slG~~l~~ll~g~~pf~ 213 (294)
T 4eqm_A 150 LKIFDFGIAKALSETSL-TQTNHVLGTVQYFSPEQA------KG---------EATDECTDIYSIGIVLYEMLVGEPPFN 213 (294)
T ss_dssp EEECCCSSSTTC--------------CCSSCCHHHH------HT---------CCCCTTHHHHHHHHHHHHHHHSSCSSC
T ss_pred EEEEeCCCccccccccc-cccCccccCccccCHhHh------cC---------CCCCchHhHHHHHHHHHHHHhCCCCCC
Confidence 4555 55655544322 134567899999999999 22 45678999999999999999999 997
Q ss_pred HHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCc-chhhHHHHHHhhhc
Q 008820 91 KELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRP-LLTNVWKCIRELII 167 (552)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~-~~~~~~~~l~~~~~ 167 (552)
......... .......+..+..........+.+++.+||+.+|.+|| ++.++.+.+..++.
T Consensus 214 ~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~ 275 (294)
T 4eqm_A 214 GETAVSIAI----------------KHIQDSVPNVTTDVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLH 275 (294)
T ss_dssp SSCHHHHHH----------------HHHSSCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSS
T ss_pred CCChHHHHH----------------HHhhccCCCcchhcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHh
Confidence 644331100 00000000011111122344599999999999999999 56778877776653
No 203
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.51 E-value=6.4e-10 Score=105.82 Aligned_cols=282 Identities=11% Similarity=0.033 Sum_probs=180.1
Q ss_pred CeEEEEEeecCccceEEEEEc--CCEEEEEeCCCcEEEEeCCCCeEEEEE-eCCCCCeEEEEEecCCCCEEEEEcCCCcE
Q 008820 241 GNVKFKDLQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTF-KGHDHKVMAVVYVDEDQPLCISGDSGGGI 317 (552)
Q Consensus 241 ~~~~~~~l~~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~~~~~~~-~~h~~~v~~v~~~~~~~~~l~s~~~dg~i 317 (552)
+.+..+.+..+...+.+++++ ++..++...++.|.+||.. ++..... ..+...+.++++.+++. ++++...++.|
T Consensus 3 g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i 80 (299)
T 2z2n_A 3 FKLQELNLTNQDTGPYGITVSDKGKVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGE-VWFTENAANKI 80 (299)
T ss_dssp EEEEEEECCSSSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSC-EEEEETTTTEE
T ss_pred ceEEEEcCCCcCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCC-EEEeCCCCCeE
Confidence 344556677788899999998 6666665557899999988 5543322 23557789999988654 66666668899
Q ss_pred EEEeCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCceeEE-ecCCCCCeEEEEEe-CCEE
Q 008820 318 FVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCT-MSGHKSAVSTLAVC-NGVL 395 (552)
Q Consensus 318 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~-~~~h~~~v~~l~~~-~~~l 395 (552)
..||... . ...+............++.++++.+++...++.|..||. +++.... ...+...+.+++++ ++.+
T Consensus 81 ~~~~~~g-~----~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l 154 (299)
T 2z2n_A 81 GRITKKG-I----IKEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNAL 154 (299)
T ss_dssp EEECTTS-C----EEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCE
T ss_pred EEECCCC-c----EEEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCE
Confidence 9998752 1 111111101111223356667777777767889999998 5554432 33345678899998 4444
Q ss_pred -EEEeCCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEECCCcEEEEeCCcceeee--ecccceEEEEEe
Q 008820 396 -YSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDKFMKSM--QTHKGSVFAVFL 472 (552)
Q Consensus 396 -~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~~~~~~~--~~h~~~v~~v~~ 472 (552)
++...++.|..||. +++.............. .+++++++++.++...++.|.+||.......+ ..+...+.++.+
T Consensus 155 ~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~-~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~ 232 (299)
T 2z2n_A 155 WFTENQNNAIGRITE-SGDITEFKIPTPASGPV-GITKGNDDALWFVEIIGNKIGRITTSGEITEFKIPTPNARPHAITA 232 (299)
T ss_dssp EEEETTTTEEEEECT-TCCEEEEECSSTTCCEE-EEEECTTSSEEEEETTTTEEEEECTTCCEEEEECSSTTCCEEEEEE
T ss_pred EEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcce-eEEECCCCCEEEEccCCceEEEECCCCcEEEEECCCCCCCceeEEE
Confidence 44455789999998 66654321211122233 36889999877766668899999974333333 224456777776
Q ss_pred --cCCEEEEEeCCCeEEEEecCCCeeeeeeccCCCcccCcceEEEEEeCCeEEEEeCCCeEEEEEec
Q 008820 473 --EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQGKLFVGCADRTVKIALCN 537 (552)
Q Consensus 473 --~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~l~s~s~Dg~v~iw~~~ 537 (552)
+|+.+++...++.|..||.. +......... ....+.++++.++.++.++..+.+..++.+
T Consensus 233 ~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~----~~~~~~~i~~~~g~l~v~~~~~~l~~~~~~ 294 (299)
T 2z2n_A 233 GAGIDLWFTEWGANKIGRLTSN-NIIEEYPIQI----KSAEPHGICFDGETIWFAMECDKIGKLTLI 294 (299)
T ss_dssp CSTTCEEEEETTTTEEEEEETT-TEEEEEECSS----SSCCEEEEEECSSCEEEEETTTEEEEEEEC
T ss_pred CCCCCEEEeccCCceEEEECCC-CceEEEeCCC----CCCccceEEecCCCEEEEecCCcEEEEEcC
Confidence 67766655577899999984 4433221111 134577777755668777767777777765
No 204
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.50 E-value=1.1e-11 Score=134.17 Aligned_cols=307 Identities=11% Similarity=0.020 Sum_probs=181.9
Q ss_pred cceeeecCcceEEEeeCCCeEEEEEe---------ecCccc-----eEEEEEc--CCEEEEEeCC---------CcEEEE
Q 008820 223 DQARAAGGVKDLVNGLSKGNVKFKDL---------QGHRDC-----VTGLAVG--GGFLFSSSFD---------KSIHVW 277 (552)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~l---------~~H~~~-----V~~l~~s--~~~l~s~s~d---------g~I~iw 277 (552)
..+.++++++.+++. ++.+.+|++ .+|... ...++|| |++|+.++.+ +.+.+|
T Consensus 20 ~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~ 97 (740)
T 4a5s_A 20 YSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIY 97 (740)
T ss_dssp CCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEE
T ss_pred cccEECCCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEE
Confidence 356667777666665 777777764 445432 2347788 8999999876 556799
Q ss_pred eCCCCeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCccccccccCCCce---------------e
Q 008820 278 SLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWR---------------Y 342 (552)
Q Consensus 278 d~~~~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~---------------~ 342 (552)
|+.+++.. .+..|.+.+...+|+|++..++.+ .|+.|++|++.++....... ....... .
T Consensus 98 d~~~~~~~-~l~~~~~~~~~~~~SPdG~~la~~--~~~~i~~~~~~~~~~~~lt~--~g~~~~~~~g~~~~v~~ee~~~~ 172 (740)
T 4a5s_A 98 DLNKRQLI-TEERIPNNTQWVTWSPVGHKLAYV--WNNDIYVKIEPNLPSYRITW--TGKEDIIYNGITDWVYEEEVFSA 172 (740)
T ss_dssp ETTTTEEC-CSSCCCTTEEEEEECSSTTCEEEE--ETTEEEEESSTTSCCEECCS--CCBTTTEEESBCCHHHHHHTSSS
T ss_pred ECCCCcEE-EcccCCCcceeeEECCCCCEEEEE--ECCeEEEEECCCCceEEEcC--CCCccceecCcccccccchhcCC
Confidence 99998854 466778899999999998866444 47899999998765322111 1111100 0
Q ss_pred eeEEEEeeCCCEEEEeeCCC------------------------------------cEEEEECCC---Cc--eeEEec--
Q 008820 343 SGIHALTTSGRYLYTGSGDR------------------------------------TIKAWSLLD---GT--LSCTMS-- 379 (552)
Q Consensus 343 ~~~~~~~~~~~~l~sgs~dg------------------------------------~i~iwd~~~---~~--~~~~~~-- 379 (552)
.....++|||+.|+.++.|. .|++||+.+ ++ ....+.
T Consensus 173 ~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~ 252 (740)
T 4a5s_A 173 YSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAP 252 (740)
T ss_dssp SBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCC
T ss_pred CcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCC
Confidence 11257999999888875332 488899988 73 223333
Q ss_pred ----CCCCCeEEEEEe-CC-EEEEEeC----CCcEEEEECCCCc----e---eEEEecCCCCceE----EEEEEcCCCCE
Q 008820 380 ----GHKSAVSTLAVC-NG-VLYSGSR----DGTIRLWSLSDHS----L---LTVLEEDSSGAVS----SVLSLTAVQHT 438 (552)
Q Consensus 380 ----~h~~~v~~l~~~-~~-~l~s~~~----dg~i~iwd~~~~~----~---~~~~~~~~~~~~~----~~~~~s~~~~~ 438 (552)
+|...+..++|+ ++ .++.... +..|++||+.+++ + ...+...+.+.+. ....|+|||+.
T Consensus 253 ~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~ 332 (740)
T 4a5s_A 253 ASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNS 332 (740)
T ss_dssp HHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSE
T ss_pred ccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcCCCCE
Confidence 377789999999 55 3444332 3479999999887 2 1111111222111 12579999998
Q ss_pred EE-EEEC-CC--cEEEEeCC-cceeeeecccceEEEE-EecCCEEEEEeCC-----CeEEEE--ecCCCeeeeeeccCCC
Q 008820 439 LV-VSHE-SG--SIKVWRND-KFMKSMQTHKGSVFAV-FLEGKWLFTGGWD-----KTVSVQ--ELAGDEFEEDVIPTGA 505 (552)
Q Consensus 439 l~-~g~~-dg--~i~iwd~~-~~~~~~~~h~~~v~~v-~~~~~~l~sgs~d-----g~i~iw--d~~~~~~~~~~~~~~~ 505 (552)
++ ..+. +| .|++||.. .....+......+..+ .+|++.|+..+.. +...+| ++.++.....+....
T Consensus 333 l~~~~s~~~G~~~l~~~~~~~~~~~~lT~g~~~v~~~~~~d~~~i~f~~~~~~~~~~~~~ly~v~~~g~~~~~~lt~~~- 411 (740)
T 4a5s_A 333 FYKIISNEEGYRHICYFQIDKKDCTFITKGTWEVIGIEALTSDYLYYISNEYKGMPGGRNLYKIQLIDYTKVTCLSCEL- 411 (740)
T ss_dssp EEEEEECTTSCEEEEEEETTCSSCEESCCSSSCEEEEEEECSSEEEEEESCGGGCTTCBEEEEEETTEEEEEEESSTTT-
T ss_pred EEEEEEcCCCceEEEEEECCCCceEecccCCEEEEEEEEEeCCEEEEEEecCCCCCceeEEEEEECCCCCcceeecccc-
Confidence 77 5553 44 57777854 3334444444455554 3677766655543 334444 554443321222110
Q ss_pred cccCcceEEEEEeCC-e-EE-EEeCC--CeEEEEEec
Q 008820 506 IPCGSVITALLYWQG-K-LF-VGCAD--RTVKIALCN 537 (552)
Q Consensus 506 ~~~~~~v~~l~~~~~-~-l~-s~s~D--g~v~iw~~~ 537 (552)
...........|+++ . ++ +.+.. ..+.+++..
T Consensus 412 ~~~~~~~~~~~~S~dg~~~~~~~s~~~~p~~~l~~~~ 448 (740)
T 4a5s_A 412 NPERCQYYSVSFSKEAKYYQLRCSGPGLPLYTLHSSV 448 (740)
T ss_dssp STTTBCBEEEEECTTSSEEEEEECSBSSCEEEEEETT
T ss_pred CCCCCceEEEEECCCCCEEEEEeCCCCCCEEEEEECC
Confidence 001345778888853 2 33 33322 356666654
No 205
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=99.50 E-value=5.6e-15 Score=143.60 Aligned_cols=103 Identities=17% Similarity=0.218 Sum_probs=69.8
Q ss_pred hhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cch
Q 008820 14 AKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFT 90 (552)
Q Consensus 14 ~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~ 90 (552)
.|+. |+++....... ....+.|||.|||||++ . ...++.++|+|||||+||||++|+ ||.
T Consensus 144 vkL~DFG~a~~~~~~~~--~~~~~~gt~~y~aPE~~------~---------~~~~~~~~DiwslG~il~ell~g~~Pf~ 206 (337)
T 1o6l_A 144 IKITDFGLCKEGISDGA--TMKTFCGTPEYLAPEVL------E---------DNDYGRAVDWWGLGVVMYEMMCGRLPFY 206 (337)
T ss_dssp EEECCCTTCBCSCCTTC--CBCCCEECGGGCCGGGG------S---------SSCBCTTHHHHHHHHHHHHHHHSSCSSC
T ss_pred EEEeeccchhhcccCCC--cccccccChhhCChhhh------c---------CCCCCchhhcccchhHHHHHhcCCCCCC
Confidence 4555 56655333222 25678999999999998 2 255778999999999999999999 996
Q ss_pred HHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcc
Q 008820 91 KELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPL 154 (552)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~ 154 (552)
......+ ...+.............++.+++.+||+.+|.+||.
T Consensus 207 ~~~~~~~---------------------~~~i~~~~~~~p~~~s~~~~~li~~lL~~dP~~R~g 249 (337)
T 1o6l_A 207 NQDHERL---------------------FELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLG 249 (337)
T ss_dssp CSSHHHH---------------------HHHHHHCCCCCCTTSCHHHHHHHHHHTCSSTTTSTT
T ss_pred CCCHHHH---------------------HHHHHcCCCCCCCCCCHHHHHHHHHHhhcCHHHhcC
Confidence 6443311 111111011111223456899999999999999993
No 206
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=99.50 E-value=3.6e-15 Score=146.27 Aligned_cols=112 Identities=20% Similarity=0.258 Sum_probs=74.9
Q ss_pred hhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cch
Q 008820 14 AKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFT 90 (552)
Q Consensus 14 ~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~ 90 (552)
.|+. |+++.+..... ......||+.|||||++ . ...+++++|||||||+||+|++|+ ||.
T Consensus 172 vkl~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~~------~---------~~~~~~~~DiwslG~il~~ll~g~~pf~ 234 (351)
T 3c0i_A 172 VKLGGFGVAIQLGESGL--VAGGRVGTPHFMAPEVV------K---------REPYGKPVDVWGCGVILFILLSGCLPFY 234 (351)
T ss_dssp EEECCCTTCEECCTTSC--BCCCCCSCGGGCCHHHH------T---------TCCBCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred EEEecCcceeEecCCCe--eecCCcCCcCccCHHHH------c---------CCCCCchHhhHHHHHHHHHHHHCCCCCC
Confidence 5666 55655554332 35677899999999999 2 245678999999999999999999 996
Q ss_pred HHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 91 KELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
......+. .+.......+...+.....++.+++.+||+.+|.+||++.++.+
T Consensus 235 ~~~~~~~~------------------~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 286 (351)
T 3c0i_A 235 GTKERLFE------------------GIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERITVYEALN 286 (351)
T ss_dssp SSHHHHHH------------------HHHHTCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CcHHHHHH------------------HHHcCCCCCCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 63322111 00000000011111223446899999999999999999887655
No 207
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.50 E-value=1e-11 Score=122.04 Aligned_cols=257 Identities=10% Similarity=0.052 Sum_probs=166.3
Q ss_pred EEEeecCccceEEEEEc--CCEEEEEe----------CCCcEEEEeCCCCeEEEEEeCC------CCCeEEEEEecCCCC
Q 008820 245 FKDLQGHRDCVTGLAVG--GGFLFSSS----------FDKSIHVWSLKDFSHVHTFKGH------DHKVMAVVYVDEDQP 306 (552)
Q Consensus 245 ~~~l~~H~~~V~~l~~s--~~~l~s~s----------~dg~I~iwd~~~~~~~~~~~~h------~~~v~~v~~~~~~~~ 306 (552)
+..+..+..+ .++|+ ++++++++ .+++|.+||..+++.+.++... ......++++|++..
T Consensus 44 ~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~ 121 (361)
T 2oiz_A 44 LGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKF 121 (361)
T ss_dssp EEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSE
T ss_pred EEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCCE
Confidence 4556666666 88999 88888886 3678999999999998888643 245678899998876
Q ss_pred EEEEEcC-CCcEEEEeCCCCCCCcc-ccccccCCCceeeeEEEEeeCC-CEEEEeeCCCcEEEEECCC-CceeEE-----
Q 008820 307 LCISGDS-GGGIFVWSFSFPLGHEP-LKKWNEEKDWRYSGIHALTTSG-RYLYTGSGDRTIKAWSLLD-GTLSCT----- 377 (552)
Q Consensus 307 ~l~s~~~-dg~i~vwd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~l~sgs~dg~i~iwd~~~-~~~~~~----- 377 (552)
++++... +++|.+||+.+.+.... +.. .. . .. ..+.|++ ..+++.+.||.+.+|+... ++....
T Consensus 122 l~v~n~~~~~~v~v~d~~~~~~~~~~i~~---~~--~-~~-v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~ 194 (361)
T 2oiz_A 122 IVLQNASPATSIGIVDVAKGDYVEDVTAA---AG--C-WS-VIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQ 194 (361)
T ss_dssp EEEEEESSSEEEEEEETTTTEEEEEEGGG---TT--E-EE-EEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCC
T ss_pred EEEECCCCCCeEEEEECCCCcEEEEEecC---CC--c-ce-eEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccc
Confidence 6555444 78999999987643322 211 11 0 01 2345554 5788889999999999865 554422
Q ss_pred -ecCCCCCeEEEEEe--CCEEEEEeCCCcEEEEECCCCce--eEEEecCC-----CCceE---EEEEEcCCCCEEEEEEC
Q 008820 378 -MSGHKSAVSTLAVC--NGVLYSGSRDGTIRLWSLSDHSL--LTVLEEDS-----SGAVS---SVLSLTAVQHTLVVSHE 444 (552)
Q Consensus 378 -~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~--~~~~~~~~-----~~~~~---~~~~~s~~~~~l~~g~~ 444 (552)
+..+..++ .+.+. +..++..+.++.+.++|+..... ...+.... .+... ..++++++++.++++..
T Consensus 195 ~~~~~~~~~-~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~ 273 (361)
T 2oiz_A 195 MFSVKDDPI-FIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMH 273 (361)
T ss_dssp CSCTTTSCB-CSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEE
T ss_pred eEcCCCCce-EEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEc
Confidence 22222222 11122 34666677899999999976542 22222110 00000 01578999888887654
Q ss_pred -----------CCcEEEEeCC--cceeeeecccceEEEEE--ecCCEEEEEeCCCeEEEEecCCC--eeeeeeccCCCcc
Q 008820 445 -----------SGSIKVWRND--KFMKSMQTHKGSVFAVF--LEGKWLFTGGWDKTVSVQELAGD--EFEEDVIPTGAIP 507 (552)
Q Consensus 445 -----------dg~i~iwd~~--~~~~~~~~h~~~v~~v~--~~~~~l~sgs~dg~i~iwd~~~~--~~~~~~~~~~~~~ 507 (552)
.+.|.+||.. +.+..+..+. +.++. ++|++|++++. +.|.+||..++ +....+...
T Consensus 274 ~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~--p~~ia~spdg~~l~v~n~-~~v~v~D~~t~~l~~~~~i~~~---- 346 (361)
T 2oiz_A 274 PDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD--ALSMTIDQQRNLMLTLDG-GNVNVYDISQPEPKLLRTIEGA---- 346 (361)
T ss_dssp SSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT--CCEEEEETTTTEEEEECS-SCEEEEECSSSSCEEEEEETTS----
T ss_pred cCCCcccccCCCceEEEEECCCCcEEEEEecCC--eeEEEECCCCCEEEEeCC-CeEEEEECCCCcceeeEEeccC----
Confidence 3479999964 4566677666 55554 59999998887 99999999998 766554332
Q ss_pred cCcceEEEEEeC
Q 008820 508 CGSVITALLYWQ 519 (552)
Q Consensus 508 ~~~~v~~l~~~~ 519 (552)
......++++|
T Consensus 347 -G~~P~~~~~~p 357 (361)
T 2oiz_A 347 -AEASLQVQFHP 357 (361)
T ss_dssp -CSSEEEEEECC
T ss_pred -CCCcEEEEecC
Confidence 22345566664
No 208
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=99.50 E-value=4.7e-15 Score=142.67 Aligned_cols=116 Identities=17% Similarity=0.144 Sum_probs=71.4
Q ss_pred hhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cch
Q 008820 14 AKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFT 90 (552)
Q Consensus 14 ~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~ 90 (552)
+|+. |+++....... ......||+.|||||++ .+ ...++++|||||||+||||+||+ ||.
T Consensus 178 ~kL~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~~------~~---------~~~~~~~DiwslG~il~elltg~~Pf~ 240 (309)
T 3p86_A 178 VKVCDFGLSRLKASTFL--SSKSAAGTPEWMAPEVL------RD---------EPSNEKSDVYSFGVILWELATLQQPWG 240 (309)
T ss_dssp EEECCCC-------------------CCTTSCHHHH------TT---------CCCCTTHHHHHHHHHHHHHHHCCCTTT
T ss_pred EEECCCCCCcccccccc--ccccCCCCccccChhhh------cC---------CCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence 4555 44544333322 24567899999999999 32 45678999999999999999999 997
Q ss_pred HHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHH--HhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHHhhhc
Q 008820 91 KELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYL--LENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELII 167 (552)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~~~~~ 167 (552)
......+. ..+... ..........++.+++.+||+.+|.+||++.++.+.+..++.
T Consensus 241 ~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~ 298 (309)
T 3p86_A 241 NLNPAQVV---------------------AAVGFKCKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIK 298 (309)
T ss_dssp TSCHHHHH---------------------HHHHHSCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC
T ss_pred CCCHHHHH---------------------HHHHhcCCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 64433110 000000 001111234458999999999999999999999999888763
No 209
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=99.50 E-value=1.9e-15 Score=147.45 Aligned_cols=113 Identities=18% Similarity=0.234 Sum_probs=74.8
Q ss_pred hhhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cc
Q 008820 13 VAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QF 89 (552)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf 89 (552)
..|+. |+++.+..... ......||+.|||||++.. ..+++++|||||||+||||++|+ ||
T Consensus 158 ~~kl~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~---------------~~~~~~~DiwslG~il~ell~g~~Pf 220 (342)
T 2qr7_A 158 SIRICDFGFAKQLRAENG--LLMTPCYTANFVAPEVLER---------------QGYDAACDIWSLGVLLYTMLTGYTPF 220 (342)
T ss_dssp GEEECCCTTCEECBCTTC--CBCCSSCCSSCCCHHHHHH---------------HHHHHHHHHHHHHHHHHHHHHSSCSS
T ss_pred eEEEEECCCcccCcCCCC--ceeccCCCccccCHHHhcC---------------CCCCCccCeeeHhHHHHHHhcCCCCC
Confidence 35666 66666554432 2567789999999999932 33568999999999999999999 99
Q ss_pred hHHHhhhhhhccccCCCchhhhhhhhHHHHHHHH----HHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 90 TKELIDYIRCVSTKASDDNIACLGMYMAWMEKVT----YLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
....... ...+...+. ..+...+.....++.+++.+||..+|.+||++.++.+
T Consensus 221 ~~~~~~~------------------~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~ 277 (342)
T 2qr7_A 221 ANGPDDT------------------PEEILARIGSGKFSLSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLR 277 (342)
T ss_dssp CSSTTSC------------------HHHHHHHHHHCCCCCCSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred CCCCcCC------------------HHHHHHHHccCCcccCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 6521110 001111111 0011112234456999999999999999999877654
No 210
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=99.50 E-value=5.1e-15 Score=144.31 Aligned_cols=113 Identities=20% Similarity=0.231 Sum_probs=67.6
Q ss_pred hhhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cc
Q 008820 13 VAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QF 89 (552)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf 89 (552)
..|+. |+++....... .......||+.|||||++ .| ....+.++|||||||+||+|++|+ ||
T Consensus 146 ~~kL~DFG~a~~~~~~~~-~~~~~~~gt~~y~aPE~~------~~--------~~~~~~~~DiwSlG~il~ell~g~~Pf 210 (347)
T 3zgw_A 146 KLKLIDFGLCAKPKGNKD-YHLQTCCGSLAYAAPELI------QG--------KSYLGSEADVWSMGILLYVLMCGFLPF 210 (347)
T ss_dssp CEEECCCTTCBC---------------CGGGCCHHHH------TT--------C---CCHHHHHHHHHHHHHHHHSSCSS
T ss_pred CEEEEeccCcccccCCCC-ccccccCCccCccCHHHH------cC--------CCCCCcHhHHHHHHHHHHHHHHCCCCC
Confidence 35555 55555443322 235678899999999999 33 122468999999999999999999 99
Q ss_pred hHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHH
Q 008820 90 TKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKC 161 (552)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~ 161 (552)
...+...+ ...+.............++.+++.+||+.+|.+||++.++.+.
T Consensus 211 ~~~~~~~~---------------------~~~i~~~~~~~p~~~s~~~~~li~~~L~~dP~~Rps~~eil~h 261 (347)
T 3zgw_A 211 DDDNVMAL---------------------YKKIMRGKYDVPKWLSPSSILLLQQMLQVDPKKRISMKNLLNH 261 (347)
T ss_dssp CCSSHHHH---------------------HHHHHHTCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred CCCCHHHH---------------------HHHHHcCCCCCCCCCCHHHHHHHHHHcccCHhHCcCHHHHhcC
Confidence 76543311 1111111111112234558899999999999999998887653
No 211
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=99.49 E-value=2.4e-15 Score=145.55 Aligned_cols=113 Identities=16% Similarity=0.174 Sum_probs=76.5
Q ss_pred hhhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cc
Q 008820 13 VAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QF 89 (552)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf 89 (552)
..|+. |+++.+..... .....|||.|||||++ .+ ..+++++|||||||+||+|++|+ ||
T Consensus 142 ~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~------~~---------~~~~~~~DiwslG~il~~ll~g~~pf 203 (321)
T 1tki_A 142 TIKIIEFGQARQLKPGDN---FRLLFTAPEYYAPEVH------QH---------DVVSTATDMWSLGTLVYVLLSGINPF 203 (321)
T ss_dssp CEEECCCTTCEECCTTCE---EEEEESCGGGSCHHHH------TT---------CEECHHHHHHHHHHHHHHHHHSSCTT
T ss_pred CEEEEECCCCeECCCCCc---cccccCChhhcCcHHh------cC---------CCCCchhhHHHHHHHHHHHHhCCCCC
Confidence 44555 56666654432 4667899999999999 32 45678999999999999999999 99
Q ss_pred hHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 90 TKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
...+...+. ..+.......+.........++.+++.+||..+|.+||++.++.+
T Consensus 204 ~~~~~~~~~-----------------~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~ 257 (321)
T 1tki_A 204 LAETNQQII-----------------ENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQ 257 (321)
T ss_dssp CCSSHHHHH-----------------HHHHHTCCCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred cCCCHHHHH-----------------HHHHcCCCCCChhhhccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 664433111 000000000111112233456899999999999999999988766
No 212
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.49 E-value=9.7e-12 Score=132.98 Aligned_cols=246 Identities=11% Similarity=0.046 Sum_probs=156.7
Q ss_pred eecCccceE---------EEEEc----CCE-EEEEeC-CCcEEEEeCC--CCeEEEEEeC-----CCCCeEEEEEecCCC
Q 008820 248 LQGHRDCVT---------GLAVG----GGF-LFSSSF-DKSIHVWSLK--DFSHVHTFKG-----HDHKVMAVVYVDEDQ 305 (552)
Q Consensus 248 l~~H~~~V~---------~l~~s----~~~-l~s~s~-dg~I~iwd~~--~~~~~~~~~~-----h~~~v~~v~~~~~~~ 305 (552)
+..|...+. ...|+ |+. |+.++. +..|.+|++. .......+.. |...+.+++|+|+++
T Consensus 63 l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~~~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~ 142 (662)
T 3azo_A 63 ALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHFGDQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERG 142 (662)
T ss_dssp SSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEBTTTCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTT
T ss_pred eCCCCccccccccccCCccceeeeecCCCeEEEEEECCCCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCC
Confidence 455665555 55454 776 665543 5667777765 2033445555 677889999999887
Q ss_pred CEEEEEcCC----------CcEEEEeCCCCCCC--ccccccc-cCCCceeeeEEEEeeCCCEEEEeeCC--------CcE
Q 008820 306 PLCISGDSG----------GGIFVWSFSFPLGH--EPLKKWN-EEKDWRYSGIHALTTSGRYLYTGSGD--------RTI 364 (552)
Q Consensus 306 ~~l~s~~~d----------g~i~vwd~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~l~sgs~d--------g~i 364 (552)
.+ ++++.| ..|++||+.+.... .....+. .... .....+++|||++|+.++.+ ..|
T Consensus 143 ~l-~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i 219 (662)
T 3azo_A 143 EV-WCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVRELSDDAHR--FVTGPRLSPDGRQAVWLAWDHPRMPWEGTEL 219 (662)
T ss_dssp EE-EEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSEESSCSCSS--EECCCEECTTSSEEEEEEECTTCCTTTCEEE
T ss_pred EE-EEEEecccCCCCCCceeEEEEEECCCCccccCCceeEEEecCCC--cccCceECCCCCEEEEEECCCCCCCCCCcEE
Confidence 55 555554 58999999862000 0111111 1111 11224789999999887755 379
Q ss_pred EEEECC-CC---ceeEEecCCCCCeEEEEEe-CC-EEEEEeCCC--cEEEEECCCCceeEEEecCCCCc--------eEE
Q 008820 365 KAWSLL-DG---TLSCTMSGHKSAVSTLAVC-NG-VLYSGSRDG--TIRLWSLSDHSLLTVLEEDSSGA--------VSS 428 (552)
Q Consensus 365 ~iwd~~-~~---~~~~~~~~h~~~v~~l~~~-~~-~l~s~~~dg--~i~iwd~~~~~~~~~~~~~~~~~--------~~~ 428 (552)
++||+. ++ +......+|...+..+.|+ ++ ++++++.++ .|.+||+.+++.......+ ... ...
T Consensus 220 ~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~-~~~~~p~w~~~~~~ 298 (662)
T 3azo_A 220 KTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCRRE-EEFAGPLWTPGMRW 298 (662)
T ss_dssp EEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSCCS-SBSSCCCCSTTCCS
T ss_pred EEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCceeeccccc-ccccCccccccCce
Confidence 999998 57 4444445567889999999 44 777777788 6667776666654333221 111 122
Q ss_pred EEEEcCCCCEEEEEECCCcEEEE--eCC-cceeeeecccceEEEE-EecCCEEE--EEeCCC--eEEEEecCCCeeeee
Q 008820 429 VLSLTAVQHTLVVSHESGSIKVW--RND-KFMKSMQTHKGSVFAV-FLEGKWLF--TGGWDK--TVSVQELAGDEFEED 499 (552)
Q Consensus 429 ~~~~s~~~~~l~~g~~dg~i~iw--d~~-~~~~~~~~h~~~v~~v-~~~~~~l~--sgs~dg--~i~iwd~~~~~~~~~ 499 (552)
++++++++++++++. +.+++| |.. .....+..|...+..+ +++++.++ +++.+. .|.+||+.+++....
T Consensus 299 -~~~~~~~~~~~~~~~-~~~~l~~~d~~~~~~~~l~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~l 375 (662)
T 3azo_A 299 -FAPLANGLIAVVHGK-GAAVLGILDPESGELVDAAGPWTEWAATLTVSGTRAVGVAASPRTAYEVVELDTVTGRARTI 375 (662)
T ss_dssp -EEECTTSCEEEEEBS-SSCEEEEEETTTTEEEECCSSCCEEEEEEEEETTEEEEEEEETTEEEEEEEEETTTCCEEEE
T ss_pred -EeEeCCCEEEEEEEc-CccEEEEEECCCCcEEEecCCCCeEEEEEecCCCEEEEEEcCCCCCCEEEEEECCCCceEEe
Confidence 578899999999998 999999 543 4467777888888888 88666433 445454 456667767655443
No 213
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=99.49 E-value=7.1e-15 Score=144.79 Aligned_cols=108 Identities=15% Similarity=0.122 Sum_probs=73.8
Q ss_pred hhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cch
Q 008820 14 AKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFT 90 (552)
Q Consensus 14 ~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~ 90 (552)
.|+. |+++....... ....+.||+.|||||++ . ...++.++|+|||||+||||++|+ ||.
T Consensus 178 ikL~DFG~a~~~~~~~~--~~~~~~gt~~y~aPE~~------~---------~~~~~~~~DiwslG~il~ell~G~~Pf~ 240 (373)
T 2r5t_A 178 IVLTDFGLCKENIEHNS--TTSTFCGTPEYLAPEVL------H---------KQPYDRTVDWWCLGAVLYEMLYGLPPFY 240 (373)
T ss_dssp EEECCCCBCGGGBCCCC--CCCSBSCCCCCCCHHHH------T---------TCCCCTHHHHHHHHHHHHHHHHSSCTTC
T ss_pred EEEeeCccccccccCCC--ccccccCCccccCHHHh------C---------CCCCCchhhhHHHHHHHHHHHcCCCCCC
Confidence 4555 56655333222 26788999999999999 2 245678999999999999999999 997
Q ss_pred HHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHH
Q 008820 91 KELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVW 159 (552)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~ 159 (552)
..+...+ ...+...+.........++.+++.+||+.+|.+||+..+..
T Consensus 241 ~~~~~~~---------------------~~~i~~~~~~~~~~~~~~~~~li~~lL~~dp~~R~~~~~~~ 288 (373)
T 2r5t_A 241 SRNTAEM---------------------YDNILNKPLQLKPNITNSARHLLEGLLQKDRTKRLGAKDDF 288 (373)
T ss_dssp CSBHHHH---------------------HHHHHHSCCCCCSSSCHHHHHHHHHHTCSSGGGSTTTTTTH
T ss_pred CCCHHHH---------------------HHHHHhcccCCCCCCCHHHHHHHHHHcccCHHhCCCCCCCH
Confidence 6443311 11111111111223345689999999999999999986433
No 214
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=99.49 E-value=1.5e-14 Score=141.55 Aligned_cols=126 Identities=13% Similarity=0.098 Sum_probs=81.2
Q ss_pred hhhcc--cccccccccchh-----hhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhh
Q 008820 13 VAKVG--CVGSRICDKEVG-----LFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI 85 (552)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~-----~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~llt 85 (552)
..|+. |+++.+...... .......||+.|||||++ .+ ..++.++|||||||+||||+|
T Consensus 191 ~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~------~~---------~~~~~~~Di~slG~il~ell~ 255 (345)
T 2v62_A 191 QVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAH------KG---------VALSRRSDVEILGYCMLRWLC 255 (345)
T ss_dssp SEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHH------HT---------CCCCHHHHHHHHHHHHHHHHH
T ss_pred cEEEEeCCCceecccccccccchhccccccCCCccccCHHHh------cC---------CCCCchhhHHHHHHHHHHHHh
Confidence 45666 566665443211 113667899999999999 22 456789999999999999999
Q ss_pred CC-CchHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhc--CccccHHHHHHhhcccCCCCCcchhhHHHHH
Q 008820 86 GE-QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFG--SEFVSLQLMFCQCLNFDPGCRPLLTNVWKCI 162 (552)
Q Consensus 86 g~-pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l 162 (552)
|+ ||......... ............+........ ....++.+++.+||+.+|.+||++.++.+.+
T Consensus 256 g~~pf~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L 323 (345)
T 2v62_A 256 GKLPWEQNLKDPVA------------VQTAKTNLLDELPQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKIL 323 (345)
T ss_dssp SSCTTGGGTTCHHH------------HHHHHHHHHHTTTHHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHH
T ss_pred CCCCccccccccHH------------HHHHHHhhcccccHHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHHHH
Confidence 99 99653221000 000011111111111111111 3455699999999999999999999999988
Q ss_pred Hhh
Q 008820 163 REL 165 (552)
Q Consensus 163 ~~~ 165 (552)
..+
T Consensus 324 ~~~ 326 (345)
T 2v62_A 324 NPH 326 (345)
T ss_dssp CTT
T ss_pred hcc
Confidence 764
No 215
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=99.49 E-value=4.5e-15 Score=145.22 Aligned_cols=104 Identities=18% Similarity=0.174 Sum_probs=66.2
Q ss_pred hhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cch
Q 008820 14 AKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFT 90 (552)
Q Consensus 14 ~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~ 90 (552)
.|+. |+|+....... ....++|||.|||||++.+ ..++.++|||||||+||||++|+ ||.
T Consensus 163 ikL~DFG~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~---------------~~~~~~~DiwslG~il~ell~G~~Pf~ 225 (353)
T 3txo_A 163 CKLADFGMCKEGICNGV--TTATFCGTPDYIAPEILQE---------------MLYGPAVDWWAMGVLLYEMLCGHAPFE 225 (353)
T ss_dssp EEECCCTTCBCSCC-----------CCGGGCCHHHHHH---------------HHCTTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred EEEccccceeecccCCc--cccccCCCcCeEChhhcCC---------------CCcCCccCCCcchHHHHHHHhCCCCCC
Confidence 4555 56654333322 2677899999999999932 34568999999999999999999 997
Q ss_pred HHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcch
Q 008820 91 KELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLL 155 (552)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~ 155 (552)
..+...+ ...+..............+.+++.+||+++|.+||+.
T Consensus 226 ~~~~~~~---------------------~~~i~~~~~~~p~~~~~~~~~li~~lL~~dP~~R~~~ 269 (353)
T 3txo_A 226 AENEDDL---------------------FEAILNDEVVYPTWLHEDATGILKSFMTKNPTMRLGS 269 (353)
T ss_dssp CSSHHHH---------------------HHHHHHCCCCCCTTSCHHHHHHHHHHTCSSGGGSTTS
T ss_pred CCCHHHH---------------------HHHHHcCCCCCCCCCCHHHHHHHHHHhhhCHHHccCC
Confidence 6543311 1111111111112234458999999999999999997
No 216
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=99.49 E-value=7.4e-15 Score=142.28 Aligned_cols=137 Identities=14% Similarity=0.066 Sum_probs=81.6
Q ss_pred hhhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cc
Q 008820 13 VAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QF 89 (552)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf 89 (552)
.+|+. |+++.+.............||+.|||||++ .+. ......++.++|||||||+||||+||+ ||
T Consensus 169 ~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~------~~~----~~~~~~~~~~~DiwslG~il~el~tg~~pf 238 (322)
T 3soc_A 169 TACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVL------EGA----INFQRDAFLRIDMYAMGLVLWELASRCTAA 238 (322)
T ss_dssp CEEECCCTTCEEECTTSCCCCCTTCCCCGGGCCHHHH------TTC----CCCCHHHHHHHHHHHHHHHHHHHHTTBTTS
T ss_pred eEEEccCCcccccccccCccccccCccCccccCHhhc------ccc----cccCcCCCccchhHHHHHHHHHHHhCCCCC
Confidence 45666 666666554433335567899999999999 220 001135567899999999999999999 99
Q ss_pred hHHHhhhhhhccccCCCchhhhh--hhhHHHHHHHHHHH-hhhh----c--CccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 90 TKELIDYIRCVSTKASDDNIACL--GMYMAWMEKVTYLL-ENKF----G--SEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~-~~~~----~--~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
.+....... +...... .....+........ .+.. . ....++.+++.+||+.+|.+||++.++.+
T Consensus 239 ~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~ 311 (322)
T 3soc_A 239 DGPVDEYML-------PFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGE 311 (322)
T ss_dssp SSCCCCCCC-------TTHHHHCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CCCcchhcc-------chhhhhccCCchhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 764322100 0000000 00111111110000 0000 0 01123889999999999999999999999
Q ss_pred HHHhhh
Q 008820 161 CIRELI 166 (552)
Q Consensus 161 ~l~~~~ 166 (552)
.+.++.
T Consensus 312 ~L~~l~ 317 (322)
T 3soc_A 312 RITQMQ 317 (322)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 888764
No 217
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.48 E-value=3.8e-11 Score=114.59 Aligned_cols=239 Identities=14% Similarity=0.082 Sum_probs=160.1
Q ss_pred EEeecCccceEEEEEc--CC-EEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeC
Q 008820 246 KDLQGHRDCVTGLAVG--GG-FLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSF 322 (552)
Q Consensus 246 ~~l~~H~~~V~~l~~s--~~-~l~s~s~dg~I~iwd~~~~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~ 322 (552)
..+..+.....+++|+ ++ +++++..++.|..||..++ ...+..+...+.++++.+++. ++++...++.|.+||.
T Consensus 21 ~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~-l~v~~~~~~~i~~~d~ 97 (296)
T 3e5z_A 21 RRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGH-LIACSHGLRRLERQRE 97 (296)
T ss_dssp EEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECTTCC-EEEEETTTTEEEEECS
T ss_pred EEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECCCCc-EEEEecCCCeEEEEcC
Confidence 3344566678899998 66 7888888999999999887 667777888899999999765 6677777789999998
Q ss_pred CCCCCCccccccccCCCceeeeEEEEeeCCCEEEE----ee-------------CCCcEEEEECCCCceeEEecCCCCCe
Q 008820 323 SFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYT----GS-------------GDRTIKAWSLLDGTLSCTMSGHKSAV 385 (552)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s----gs-------------~dg~i~iwd~~~~~~~~~~~~h~~~v 385 (552)
.++............. .....-.+++++|+++++ |+ ..+.|..+|.. ++. ..+..+....
T Consensus 98 ~~g~~~~~~~~~~~~~-~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~-~~~~~~~~~~ 174 (296)
T 3e5z_A 98 PGGEWESIADSFEGKK-LNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTL-SAPIRDRVKP 174 (296)
T ss_dssp TTCCEEEEECEETTEE-CCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCE-EEEECCCSSE
T ss_pred CCCcEEEEeeccCCCC-CCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCE-EEeecCCCCC
Confidence 7654322111111100 001112467888887777 33 13456666654 443 3445566678
Q ss_pred EEEEEe-CC-EEEEEeCCCcEEEEECC-CCce---eEEEecCCCCceEEEEEEcCCCCEEEEEECCCcEEEEeCC-ccee
Q 008820 386 STLAVC-NG-VLYSGSRDGTIRLWSLS-DHSL---LTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRND-KFMK 458 (552)
Q Consensus 386 ~~l~~~-~~-~l~s~~~dg~i~iwd~~-~~~~---~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~-~~~~ 458 (552)
..++|+ ++ .+++.+.++.|.+||+. +++. ...+ ....+.... ++++++|++.++. ++.|.+||.. +.+.
T Consensus 175 ~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~-~~~~~~p~~-i~~d~~G~l~v~~--~~~v~~~~~~g~~~~ 250 (296)
T 3e5z_A 175 NGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHF-TVEPGKTDG-LRVDAGGLIWASA--GDGVHVLTPDGDELG 250 (296)
T ss_dssp EEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEE-CCSSSCCCS-EEEBTTSCEEEEE--TTEEEEECTTSCEEE
T ss_pred ccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEe-eCCCCCCCe-EEECCCCCEEEEc--CCeEEEECCCCCEEE
Confidence 899998 33 66777788999999997 5554 3333 222222333 6899999866665 7899999964 4556
Q ss_pred eeecccceEEEEEe---cCCEEEEEeCCCeEEEEecCCCee
Q 008820 459 SMQTHKGSVFAVFL---EGKWLFTGGWDKTVSVQELAGDEF 496 (552)
Q Consensus 459 ~~~~h~~~v~~v~~---~~~~l~sgs~dg~i~iwd~~~~~~ 496 (552)
.+..+.. +.++.+ +++.|++++.+ .+..++..+.++
T Consensus 251 ~~~~~~~-~~~~~f~~~d~~~L~v~t~~-~l~~~~~~~~~~ 289 (296)
T 3e5z_A 251 RVLTPQT-TSNLCFGGPEGRTLYMTVST-EFWSIETNVRGL 289 (296)
T ss_dssp EEECSSC-CCEEEEESTTSCEEEEEETT-EEEEEECSCCBC
T ss_pred EEECCCC-ceeEEEECCCCCEEEEEcCC-eEEEEEcccccc
Confidence 6666666 667666 66788888876 455556666544
No 218
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=99.48 E-value=2.6e-14 Score=140.95 Aligned_cols=129 Identities=14% Similarity=0.112 Sum_probs=84.1
Q ss_pred hhhcc--cccccccccchh-----hhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhh
Q 008820 13 VAKVG--CVGSRICDKEVG-----LFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI 85 (552)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~-----~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~llt 85 (552)
.+|+. |+++.+...... .....+.||+.|||||++ .| ..++.++|||||||+||||+|
T Consensus 192 ~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~------~~---------~~~~~~~Di~slG~~l~el~~ 256 (364)
T 3op5_A 192 QVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAH------NG---------VAPSRRGDLEILGYCMIQWLT 256 (364)
T ss_dssp CEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHH------TT---------CCCCHHHHHHHHHHHHHHHHH
T ss_pred eEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHh------CC---------CCCCchhhHHHHHHHHHHHHh
Confidence 35555 667666544321 112456699999999999 33 457889999999999999999
Q ss_pred CC-CchHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhh--cCccccHHHHHHhhcccCCCCCcchhhHHHHH
Q 008820 86 GE-QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKF--GSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCI 162 (552)
Q Consensus 86 g~-pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l 162 (552)
|+ ||......... .................... ...+.++.+++.+|++.+|.+||++.++.+.+
T Consensus 257 g~~Pf~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l 324 (364)
T 3op5_A 257 GHLPWEDNLKDPKY------------VRDSKIRYRENIASLMDKCFPAANAPGEIAKYMETVKLLDYTEKPLYENLRDIL 324 (364)
T ss_dssp SCCTTGGGTTCHHH------------HHHHHHHHHHCHHHHHHHHSCTTCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHH
T ss_pred CCCCccccccCHHH------------HHHHHHHhhhhHHHHHHHhcccccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHH
Confidence 99 99863322000 00000111111222221111 23355699999999999999999999999998
Q ss_pred HhhhcC
Q 008820 163 RELIIK 168 (552)
Q Consensus 163 ~~~~~~ 168 (552)
..++..
T Consensus 325 ~~~~~~ 330 (364)
T 3op5_A 325 LQGLKA 330 (364)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 887643
No 219
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=99.48 E-value=1.1e-14 Score=142.38 Aligned_cols=104 Identities=17% Similarity=0.165 Sum_probs=70.9
Q ss_pred hhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cch
Q 008820 14 AKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFT 90 (552)
Q Consensus 14 ~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~ 90 (552)
.|+. |+++....... ....+.|||.|||||++ . ...++.++|+|||||+||||++|+ ||.
T Consensus 160 vkL~DFG~a~~~~~~~~--~~~~~~gt~~y~aPE~~------~---------~~~~~~~~DiwslG~il~ell~G~~Pf~ 222 (353)
T 2i0e_A 160 IKIADFGMCKENIWDGV--TTKTFCGTPDYIAPEII------A---------YQPYGKSVDWWAFGVLLYEMLAGQAPFE 222 (353)
T ss_dssp EEECCCTTCBCCCCTTC--CBCCCCSCGGGCCHHHH------T---------TCCBSTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred EEEEeCCcccccccCCc--ccccccCCccccChhhh------c---------CCCcCCcccccchHHHHHHHHcCCCCCC
Confidence 4555 55654332222 25678999999999999 2 245678999999999999999999 997
Q ss_pred HHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcch
Q 008820 91 KELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLL 155 (552)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~ 155 (552)
..+...+ ...+.............++.+++.+||+.+|.+||+.
T Consensus 223 ~~~~~~~---------------------~~~i~~~~~~~p~~~s~~~~~li~~lL~~dP~~R~~~ 266 (353)
T 2i0e_A 223 GEDEDEL---------------------FQSIMEHNVAYPKSMSKEAVAICKGLMTKHPGKRLGC 266 (353)
T ss_dssp CSSHHHH---------------------HHHHHHCCCCCCTTSCHHHHHHHHHHTCSCTTSCTTC
T ss_pred CCCHHHH---------------------HHHHHhCCCCCCCCCCHHHHHHHHHHhhcCHHHcCCC
Confidence 6443311 1111111111112234568999999999999999975
No 220
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=99.48 E-value=7.5e-15 Score=145.98 Aligned_cols=126 Identities=17% Similarity=0.245 Sum_probs=72.4
Q ss_pred hhhhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-C
Q 008820 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (552)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-p 88 (552)
...|+. |+++.+.............||+.|||||++....... ........+++++|||||||+||||++|+ |
T Consensus 191 ~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~----~~~~~~~~~~~~~DiwSlGvil~ell~G~~P 266 (390)
T 2zmd_A 191 GMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSR----ENGKSKSKISPKSDVWSLGCILYYMTYGKTP 266 (390)
T ss_dssp SCEEECCCSSSCCC---------CCSCCCGGGCCHHHHHCC----------------CCHHHHHHHHHHHHHHHHHSSCT
T ss_pred CeEEEEecCccccccCCCccccCCCCCcCCCccChHHhhhccccc----cccccccCCCChhhHHHHHHHHHHHHHCCCc
Confidence 346777 6777776554433456788999999999993210000 00001235778999999999999999999 9
Q ss_pred chHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHH--HhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHH
Q 008820 89 FTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYL--LENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKC 161 (552)
Q Consensus 89 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~ 161 (552)
|...... + ... ..+... ...........+.+++.+||+.+|.+||++.++.+.
T Consensus 267 f~~~~~~-~------------------~~~-~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h 321 (390)
T 2zmd_A 267 FQQIINQ-I------------------SKL-HAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 321 (390)
T ss_dssp TTTCCCH-H------------------HHH-HHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred chhhhHH-H------------------HHH-HHHhCccccCCCCccchHHHHHHHHHHcccChhhCCCHHHHhhC
Confidence 9652111 0 000 000000 000111123358899999999999999998877653
No 221
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=99.48 E-value=7.2e-15 Score=144.83 Aligned_cols=119 Identities=16% Similarity=0.240 Sum_probs=81.4
Q ss_pred hhhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhh-CC-C
Q 008820 13 VAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE-Q 88 (552)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~llt-g~-p 88 (552)
.+|++ |+++.+.........+...||+.|||||++. ...++.++|||||||+||||+| |+ |
T Consensus 231 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~---------------~~~~~~~~Di~slG~il~ellt~g~~p 295 (359)
T 3vhe_A 231 VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIF---------------DRVYTIQSDVWSFGVLLWEIFSLGASP 295 (359)
T ss_dssp CEEECCCGGGSCTTSCTTCEEC--CEECGGGCCHHHHH---------------HCCCCHHHHHHHHHHHHHHHTTTSCCS
T ss_pred cEEEEeccceeeecccccchhccccCCCceeEChhhhc---------------CCCCCchhhhhhHHHHHHHHHhcCCCC
Confidence 45666 5666665444333467788999999999992 2456789999999999999999 99 9
Q ss_pred chHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHH-HhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHHhhh
Q 008820 89 FTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYL-LENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELI 166 (552)
Q Consensus 89 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~~~~ 166 (552)
|........ ........ ..........++.+++.+||+.+|.+||++.++.+.+..++
T Consensus 296 ~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~ 354 (359)
T 3vhe_A 296 YPGVKIDEE--------------------FCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 354 (359)
T ss_dssp STTCCCSHH--------------------HHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCccchhHH--------------------HHHHHHcCCCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHH
Confidence 976432200 00000000 01111223446999999999999999999999999988875
No 222
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=99.48 E-value=4.9e-15 Score=146.21 Aligned_cols=121 Identities=17% Similarity=0.148 Sum_probs=82.6
Q ss_pred hhhhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhh-CC-
Q 008820 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE- 87 (552)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~llt-g~- 87 (552)
..+|++ |+++.+.............||+.|||||++. ...+++++|||||||+||||+| |+
T Consensus 221 ~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~---------------~~~~~~~~DvwslG~il~ellt~g~~ 285 (367)
T 3l9p_A 221 RVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFM---------------EGIFTSKTDTWSFGVLLWEIFSLGYM 285 (367)
T ss_dssp CCEEECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHH---------------HCCCCHHHHHHHHHHHHHHHHTTSCC
T ss_pred ceEEECCCccccccccccccccCCCcCCcccEECHHHhc---------------CCCCCcHHHHHHHHHHHHHHHhCCCC
Confidence 356666 5565554443333355678999999999992 2456789999999999999998 99
Q ss_pred CchHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHH-hhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHHhhh
Q 008820 88 QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLL-ENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELI 166 (552)
Q Consensus 88 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~~~~ 166 (552)
||.......+. ..+.... ..........+.+++.+||+.+|.+||++.++.+.+..+.
T Consensus 286 pf~~~~~~~~~---------------------~~i~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~ 344 (367)
T 3l9p_A 286 PYPSKSNQEVL---------------------EFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCT 344 (367)
T ss_dssp SSTTCCHHHHH---------------------HHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCCCCHHHHH---------------------HHHHcCCCCCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHh
Confidence 99764433111 1000000 0011123345889999999999999999999999888765
Q ss_pred cC
Q 008820 167 IK 168 (552)
Q Consensus 167 ~~ 168 (552)
..
T Consensus 345 ~~ 346 (367)
T 3l9p_A 345 QD 346 (367)
T ss_dssp HC
T ss_pred hC
Confidence 43
No 223
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.48 E-value=2.9e-11 Score=117.22 Aligned_cols=252 Identities=9% Similarity=-0.031 Sum_probs=169.8
Q ss_pred CCCcEEEEeCCCCeEEEEEe------CCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCccccccccCCCceee
Q 008820 270 FDKSIHVWSLKDFSHVHTFK------GHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYS 343 (552)
Q Consensus 270 ~dg~I~iwd~~~~~~~~~~~------~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~ 343 (552)
.+++|.++|.++++....+. ........+.+. ++.++++...++.|.+||..+.+....+.. .. ..
T Consensus 15 ~~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~--~~~lyv~~~~~~~v~viD~~t~~~~~~i~~---~~--~p- 86 (328)
T 3dsm_A 15 SNATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIR--DGIGWIVVNNSHVIFAIDINTFKEVGRITG---FT--SP- 86 (328)
T ss_dssp CCBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEE--TTEEEEEEGGGTEEEEEETTTCCEEEEEEC---CS--SE-
T ss_pred CCceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEE--CCEEEEEEcCCCEEEEEECcccEEEEEcCC---CC--CC-
Confidence 38899999999998765541 122346777764 455777778889999999987765444421 11 11
Q ss_pred eEEEEeeCCCEEEEeeCCCcEEEEECCCCceeEEecCCC-----CCeEEEEEeCCEEEEEe--CCCcEEEEECCCCceeE
Q 008820 344 GIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHK-----SAVSTLAVCNGVLYSGS--RDGTIRLWSLSDHSLLT 416 (552)
Q Consensus 344 ~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~-----~~v~~l~~~~~~l~s~~--~dg~i~iwd~~~~~~~~ 416 (552)
.-.+++++++.+++...++.|.+||..+++....+.... .....+++.++.++.+. .++.|.++|+.+++.+.
T Consensus 87 ~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~~~~~lyv~~~~~~~~v~viD~~t~~~~~ 166 (328)
T 3dsm_A 87 RYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQYGKYVYVNCWSYQNRILKIDTETDKVVD 166 (328)
T ss_dssp EEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEEETTEEEEEECTTCCEEEEEETTTTEEEE
T ss_pred cEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEEECCEEEEEcCCCCCEEEEEECCCCeEEE
Confidence 223566777544444488999999999999887775333 14567777777666665 48999999999999888
Q ss_pred EEecCCCCceEEEEEEcCCCCEEEEEECC----------CcEEEEeCCc--ceeeeecc-cceEEEEEe--cCCEEEEEe
Q 008820 417 VLEEDSSGAVSSVLSLTAVQHTLVVSHES----------GSIKVWRNDK--FMKSMQTH-KGSVFAVFL--EGKWLFTGG 481 (552)
Q Consensus 417 ~~~~~~~~~~~~~~~~s~~~~~l~~g~~d----------g~i~iwd~~~--~~~~~~~h-~~~v~~v~~--~~~~l~sgs 481 (552)
.+..... ... +.++++|++++++..+ +.|.++|..+ ....+... ......+.+ ++++|+++.
T Consensus 167 ~i~~g~~--p~~-i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~ 243 (328)
T 3dsm_A 167 ELTIGIQ--PTS-LVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWIN 243 (328)
T ss_dssp EEECSSC--BCC-CEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEES
T ss_pred EEEcCCC--ccc-eEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEc
Confidence 8765321 222 6889999877776554 7899999653 33344322 123455555 688888876
Q ss_pred CCCeEEEEecCCCeeeeeeccCCCcccCcceEEEEEeC--CeEEEE-----eCCCeEEEEEec
Q 008820 482 WDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQ--GKLFVG-----CADRTVKIALCN 537 (552)
Q Consensus 482 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~~--~~l~s~-----s~Dg~v~iw~~~ 537 (552)
. .|.+||..+++......... .......++++| +.++++ ..++.|.+|+.+
T Consensus 244 ~--~v~~~d~~t~~~~~~~~~~~---~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~ 301 (328)
T 3dsm_A 244 N--DIWRMPVEADRVPVRPFLEF---RDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ 301 (328)
T ss_dssp S--SEEEEETTCSSCCSSCSBCC---CSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT
T ss_pred c--EEEEEECCCCceeeeeeecC---CCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC
Confidence 5 89999998876532111110 134578899985 456555 468899999987
No 224
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.48 E-value=5.7e-12 Score=125.21 Aligned_cols=265 Identities=12% Similarity=0.028 Sum_probs=163.7
Q ss_pred EEEeCCCCeEEEEEeCCCCCeEE-----EEEecCCCCEEEEEcCCCc--EEEEeCCCCCCCccccccccCCCceeeeEEE
Q 008820 275 HVWSLKDFSHVHTFKGHDHKVMA-----VVYVDEDQPLCISGDSGGG--IFVWSFSFPLGHEPLKKWNEEKDWRYSGIHA 347 (552)
Q Consensus 275 ~iwd~~~~~~~~~~~~h~~~v~~-----v~~~~~~~~~l~s~~~dg~--i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (552)
..+|..++..+..+..|...... .+|+|++..+++++..++. |.+||+.++........ +.. . .....
T Consensus 13 ~~~~~~~g~~~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~---~~~-~-~~~~~ 87 (388)
T 3pe7_A 13 TYQDASTGAQVTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEG---RGD-N-TFGGF 87 (388)
T ss_dssp EEECTTTCCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCS---SCB-C-SSSCE
T ss_pred EEecCCCCcceEEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeC---CCC-C-ccceE
Confidence 34577888888888888776666 8899988866666655774 77788876543322211 110 0 00136
Q ss_pred EeeCCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEE--e-CC-EEEEE----------------------eCC
Q 008820 348 LTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAV--C-NG-VLYSG----------------------SRD 401 (552)
Q Consensus 348 ~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~--~-~~-~l~s~----------------------~~d 401 (552)
++|+++.|+.++.++.|++||+.+++....+..+...+....+ + ++ .++.. ..+
T Consensus 88 ~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (388)
T 3pe7_A 88 LSPDDDALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPC 167 (388)
T ss_dssp ECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCC
T ss_pred EcCCCCEEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCc
Confidence 9999999999999999999999999887777766666655554 4 34 44422 245
Q ss_pred CcEEEEECCCCceeEEEecCCCCceEEEEEEcC-CCCEEEEEECC------CcEEEEeCC-cceeeeeccc--ceEEEEE
Q 008820 402 GTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTA-VQHTLVVSHES------GSIKVWRND-KFMKSMQTHK--GSVFAVF 471 (552)
Q Consensus 402 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~-~~~~l~~g~~d------g~i~iwd~~-~~~~~~~~h~--~~v~~v~ 471 (552)
..|.+||+.+++........ ..... ..|+| +|+.|+....+ ..|.++|.. .....+..+. ..+....
T Consensus 168 ~~l~~~d~~~g~~~~l~~~~--~~~~~-~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~ 244 (388)
T 3pe7_A 168 CRLMRVDLKTGESTVILQEN--QWLGH-PIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHAEGESCTHEF 244 (388)
T ss_dssp EEEEEEETTTCCEEEEEEES--SCEEE-EEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCCTTEEEEEEE
T ss_pred ceEEEEECCCCceEEeecCC--ccccc-cEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCCCCcccccce
Confidence 78999999998765544432 23333 68999 99988877753 378888854 3344444444 2455555
Q ss_pred e--cCCEEEEEeC-CC----eEEEEecCCCeeeeeeccCCCcccCcceEEEEEeC--CeEEEE---------eCCCeEEE
Q 008820 472 L--EGKWLFTGGW-DK----TVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQ--GKLFVG---------CADRTVKI 533 (552)
Q Consensus 472 ~--~~~~l~sgs~-dg----~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~~--~~l~s~---------s~Dg~v~i 533 (552)
| ||+.|+..+. ++ .|++||+.+++.....................|+| ..|+.. ..+..|++
T Consensus 245 ~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~ 324 (388)
T 3pe7_A 245 WVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYV 324 (388)
T ss_dssp ECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEE
T ss_pred ECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEE
Confidence 4 8987765443 22 39999999876543322211000000011124553 234432 55678999
Q ss_pred EEecCCcceeEEEecc
Q 008820 534 ALCNRQIPEIFSLLLH 549 (552)
Q Consensus 534 w~~~~~~~~~~~~~gh 549 (552)
|++.. ..+..+..|
T Consensus 325 ~d~~~--~~~~~l~~~ 338 (388)
T 3pe7_A 325 FNMKN--GTQHRVARH 338 (388)
T ss_dssp EETTT--TEEEEEEEC
T ss_pred EeccC--CceEEeccc
Confidence 99874 234445444
No 225
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=99.48 E-value=3.7e-15 Score=146.01 Aligned_cols=116 Identities=17% Similarity=0.259 Sum_probs=66.4
Q ss_pred hhhhhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-
Q 008820 11 KSVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE- 87 (552)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~- 87 (552)
....|+. |+++.+.... ......||+.|||||++ .+ ..+++++|||||||+||||++|+
T Consensus 187 ~~~~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~------~~---------~~~~~~~DiwslG~il~ell~g~~ 248 (349)
T 2w4o_A 187 DAPLKIADFGLSKIVEHQV---LMKTVCGTPGYCAPEIL------RG---------CAYGPEVDMWSVGIITYILLCGFE 248 (349)
T ss_dssp TCCEEECCCC-------------------CGGGSCHHHH------TT---------CCCCTHHHHHHHHHHHHHHHHSSC
T ss_pred CCCEEEccCccccccCccc---ccccccCCCCccCHHHh------cC---------CCCCcccchHHHHHHHHHHHhCCC
Confidence 3445666 5566554432 35678899999999999 32 45778999999999999999999
Q ss_pred CchHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 88 QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 88 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
||......... ...+.......+.+.......++.+++.+||+.+|.+||++.++.+
T Consensus 249 pf~~~~~~~~~----------------~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 305 (349)
T 2w4o_A 249 PFYDERGDQFM----------------FRRILNCEYYFISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQ 305 (349)
T ss_dssp TTCCTTCHHHH----------------HHHHHTTCCCCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred CCCCCcccHHH----------------HHHHHhCCCccCCchhhhCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 99553322100 0000000000001111223445899999999999999999887665
No 226
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=99.48 E-value=8.2e-15 Score=140.18 Aligned_cols=112 Identities=14% Similarity=0.184 Sum_probs=73.8
Q ss_pred hhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cch
Q 008820 14 AKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFT 90 (552)
Q Consensus 14 ~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~ 90 (552)
.|+. |+++.+...... .+...||+.|||||++ . ...+++++|||||||+||||+||+ ||.
T Consensus 155 ~kl~Dfg~~~~~~~~~~~--~~~~~gt~~y~aPE~~------~---------~~~~~~~~DiwslG~il~ell~g~~pf~ 217 (297)
T 3fxz_A 155 VKLTDFGFCAQITPEQSK--RSTMVGTPYWMAPEVV------T---------RKAYGPKVDIWSLGIMAIEMIEGEPPYL 217 (297)
T ss_dssp EEECCCTTCEECCSTTCC--BCCCCSCGGGCCHHHH------H---------CSCBCTHHHHHHHHHHHHHHHHSSCTTT
T ss_pred EEEeeCCCceecCCcccc--cCCccCCcCccChhhh------c---------CCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 4555 555555544332 5678899999999999 2 245678999999999999999999 996
Q ss_pred HHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 91 KELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
........ ....... .............+.+++.+||+.+|.+||++.++.+
T Consensus 218 ~~~~~~~~-----------------~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 269 (297)
T 3fxz_A 218 NENPLRAL-----------------YLIATNG-TPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQ 269 (297)
T ss_dssp TSCHHHHH-----------------HHHHHHC-SCCCSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred CCCHHHHH-----------------HHHHhCC-CCCCCCccccCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 54322110 0000000 0000011123345889999999999999999887655
No 227
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=99.47 E-value=5.9e-15 Score=140.56 Aligned_cols=114 Identities=23% Similarity=0.286 Sum_probs=77.3
Q ss_pred hhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cch
Q 008820 14 AKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFT 90 (552)
Q Consensus 14 ~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~ 90 (552)
.|+. |+++..... .+...||+.|+|||++ .+ ....+++++|||||||+||||++|+ ||.
T Consensus 168 ~kl~Dfg~~~~~~~~-----~~~~~g~~~y~aPE~~------~~-------~~~~~~~~~Di~slG~~l~~l~~g~~pf~ 229 (287)
T 4f0f_A 168 AKVADFGLSQQSVHS-----VSGLLGNFQWMAPETI------GA-------EEESYTEKADTYSFAMILYTILTGEGPFD 229 (287)
T ss_dssp EEECCCTTCBCCSSC-----EECCCCCCTTSCGGGS------SC-------SSCEECHHHHHHHHHHHHHHHHHSSCTTT
T ss_pred EEeCCCCcccccccc-----ccccCCCccccCchhh------cc-------CCCCcCchhhHHHHHHHHHHHHcCCCCCc
Confidence 5666 455544433 5668899999999998 22 2345678999999999999999999 996
Q ss_pred HHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHH--HhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHHh
Q 008820 91 KELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYL--LENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRE 164 (552)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~~ 164 (552)
......+. ........ ...........+.+++.+||+.+|.+||++.++.+.+.+
T Consensus 230 ~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ 286 (287)
T 4f0f_A 230 EYSYGKIK-------------------FINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSE 286 (287)
T ss_dssp TCCCCHHH-------------------HHHHHHHSCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred cccccHHH-------------------HHHHHhccCCCCCCCcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHh
Confidence 53322110 00000000 011112234459999999999999999999999887764
No 228
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.47 E-value=2e-11 Score=115.04 Aligned_cols=231 Identities=10% Similarity=0.028 Sum_probs=160.9
Q ss_pred CCEEEEEeCCCcEEEEeCCCCeEEEEEeCCC-CCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCccccccccCCCc
Q 008820 262 GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHD-HKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDW 340 (552)
Q Consensus 262 ~~~l~s~s~dg~I~iwd~~~~~~~~~~~~h~-~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~ 340 (552)
++.|++++.|+.|.+||.++|+.+.++..+. ..+.++.++|+++ +++ +.++.|..||. +++....+.. ....
T Consensus 5 ~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~-ilv--s~~~~V~~~d~-~G~~~W~~~~---~~~~ 77 (276)
T 3no2_A 5 QHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGE-ILF--SYSKGAKMITR-DGRELWNIAA---PAGC 77 (276)
T ss_dssp CEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSC-EEE--ECBSEEEEECT-TSCEEEEEEC---CTTC
T ss_pred CcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCC-EEE--eCCCCEEEECC-CCCEEEEEcC---CCCc
Confidence 6789999999999999999999999999876 5789999999775 555 45788999998 5544433332 1111
Q ss_pred eeeeEEEEeeCCCEEEEeeC-CCcEEEEECCCCceeEEecC------CCCCeEEEEEe--CCEEEEEeCCCcEEEEECCC
Q 008820 341 RYSGIHALTTSGRYLYTGSG-DRTIKAWSLLDGTLSCTMSG------HKSAVSTLAVC--NGVLYSGSRDGTIRLWSLSD 411 (552)
Q Consensus 341 ~~~~~~~~~~~~~~l~sgs~-dg~i~iwd~~~~~~~~~~~~------h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~ 411 (552)
. .....+.++|+.+++.+. ++.|..+|. +|+.+..+.. +......+++. ++++++...++.|.+||..
T Consensus 78 ~-~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~- 154 (276)
T 3no2_A 78 E-MQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN- 154 (276)
T ss_dssp E-EEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-
T ss_pred c-ccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-
Confidence 1 123456789999998887 788888885 7887776642 11233445555 4588889999999999998
Q ss_pred CceeEEEecCCCCceEEEEEEcCCCCEEEEEECCCcEEEEeCC--cceeeeeccc------ceEEEEEe--cCCEEEEEe
Q 008820 412 HSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRND--KFMKSMQTHK------GSVFAVFL--EGKWLFTGG 481 (552)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~--~~~~~~~~h~------~~v~~v~~--~~~~l~sgs 481 (552)
|+.+.++.... .... ....++++.+++++.++.|..+|.. +.+..+..+. ..+..+.. +|..+++..
T Consensus 155 G~~~w~~~~~~--~~~~-~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~ 231 (276)
T 3no2_A 155 GQLLNSVKLSG--TPFS-SAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNW 231 (276)
T ss_dssp SCEEEEEECSS--CCCE-EEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEE
T ss_pred CCEEEEEECCC--Cccc-eeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEec
Confidence 99999988652 2233 4678899999999888899999954 5555554332 22455443 788777764
Q ss_pred CC--------CeEEEEec-CCCeeeeeeccCCC
Q 008820 482 WD--------KTVSVQEL-AGDEFEEDVIPTGA 505 (552)
Q Consensus 482 ~d--------g~i~iwd~-~~~~~~~~~~~~~~ 505 (552)
.. +..+++++ .+++....+.....
T Consensus 232 ~g~~~~~~~~~~~~~~~~~~~g~~~W~~~~~~~ 264 (276)
T 3no2_A 232 QGHDREAGKGKHPQLVEIDSEGKVVWQLNDKVK 264 (276)
T ss_dssp CTTCTTGGGSCCCSEEEECTTSBEEEEECCTTT
T ss_pred cCccccccccCCceEEEECCCCCEEEEecCccc
Confidence 21 23456666 35666666555444
No 229
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=99.47 E-value=7.7e-15 Score=143.53 Aligned_cols=126 Identities=17% Similarity=0.232 Sum_probs=70.0
Q ss_pred hhhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cc
Q 008820 13 VAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QF 89 (552)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf 89 (552)
..|+. |+++.+.............||+.|||||++...... .........+++++|||||||+||||++|+ ||
T Consensus 145 ~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~----~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf 220 (343)
T 3dbq_A 145 MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSS----RENGKSKSKISPKSDVWSLGCILYYMTYGKTPF 220 (343)
T ss_dssp EEEECCCSSSCCC------------CCCCSSCCHHHHHHCC---------------CCHHHHHHHHHHHHHHHHHSSCTT
T ss_pred cEEEeecccccccCcccccccCCCCcCCcCcCCHHHHhhcccc----ccccccccCCCchhhHHHHHHHHHHHHhCCCcc
Confidence 46666 677776655444446678999999999999431110 000011256778999999999999999999 99
Q ss_pred hHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHH-HHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHH
Q 008820 90 TKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTY-LLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKC 161 (552)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~ 161 (552)
...... + ......... ............+.+++.+||+.+|.+||++.++.+.
T Consensus 221 ~~~~~~-~------------------~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~h 274 (343)
T 3dbq_A 221 QQIINQ-I------------------SKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 274 (343)
T ss_dssp TTCCSH-H------------------HHHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred hhhhhH-H------------------HHHHHHhcCCcccCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhC
Confidence 652111 0 000000000 0001111223358999999999999999999887653
No 230
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=99.47 E-value=2.1e-14 Score=139.04 Aligned_cols=146 Identities=12% Similarity=0.152 Sum_probs=81.0
Q ss_pred hhhhhhhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhC
Q 008820 9 VTKSVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIG 86 (552)
Q Consensus 9 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg 86 (552)
+.....|+. |+++.+..... .....||+.|+|||++....... .....++.++|||||||+||||+||
T Consensus 150 ~~~~~~kL~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~-------~~~~~~~~~~DiwslG~il~el~~g 219 (319)
T 4euu_A 150 DGQSVYKLTDFGAARELEDDEQ---FVSLYGTEEYLHPDMYERAVLRK-------DHQKKYGATVDLWSIGVTFYHAATG 219 (319)
T ss_dssp TSCEEEEECCCTTCEECCTTCC---BCCCCSCGGGCCHHHHHHHTSCC-------CCCCCBCTTHHHHHHHHHHHHHHHS
T ss_pred CCCceEEEccCCCceecCCCCc---eeecccCCCccCHHHhhhccccc-------cccCCCCcHHHHHHHHHHHHHHHhC
Confidence 344456666 66666555432 45678999999999984322110 0135677899999999999999999
Q ss_pred C-CchHHHhh-----hhhhccccCCCchhhhhhh----hHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchh
Q 008820 87 E-QFTKELID-----YIRCVSTKASDDNIACLGM----YMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLT 156 (552)
Q Consensus 87 ~-pf~~~~~~-----~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~ 156 (552)
+ ||...... .+..+.....+..|..... ...|....+ ............+.+++.+||+.+|.+||++.
T Consensus 220 ~~pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ 298 (319)
T 4euu_A 220 SLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMP-VSCSLSRGLQVLLTPVLANILEADQEKCWGFD 298 (319)
T ss_dssp SCSEECTTCGGGCHHHHHHHHHHCCTTCCEEEECSTTCCEEEESSCC-TTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHH
T ss_pred CCCCCCCCccchhHHHHHHHhcCCCcccchhhhcccCCccccCccCC-cccccchhHHHHhHHHHHHhccCChhhhccHH
Confidence 9 99642211 0000000000000000000 000000000 00000000122488899999999999999999
Q ss_pred hHHHHHHhh
Q 008820 157 NVWKCIREL 165 (552)
Q Consensus 157 ~~~~~l~~~ 165 (552)
++.+....-
T Consensus 299 ell~h~~d~ 307 (319)
T 4euu_A 299 QFFAETSDI 307 (319)
T ss_dssp HHHHHHHHH
T ss_pred HhhhccHHH
Confidence 998876653
No 231
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=99.47 E-value=1.3e-14 Score=141.85 Aligned_cols=100 Identities=15% Similarity=0.108 Sum_probs=70.2
Q ss_pred hhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cch
Q 008820 14 AKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFT 90 (552)
Q Consensus 14 ~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~ 90 (552)
.|+. |+++.+... ...+.|||.|||||++ . ...++.++|||||||+||||++|+ ||.
T Consensus 180 ~kL~DFg~a~~~~~~-----~~~~~gt~~y~aPE~~------~---------~~~~~~~~DiwslG~il~ell~g~~Pf~ 239 (350)
T 1rdq_E 180 IQVTDFGFAKRVKGR-----TWTLCGTPEALAPEII------L---------SKGYNKAVDWWALGVLIYEMAAGYPPFF 239 (350)
T ss_dssp EEECCCTTCEECSSC-----BCCCEECGGGCCHHHH------T---------TCCBCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred EEEcccccceeccCC-----cccccCCccccCHHHh------c---------CCCCCCcCCEecccHhHhHHhhCCCCCC
Confidence 4555 667666554 3467899999999999 2 245678999999999999999999 997
Q ss_pred HHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcc
Q 008820 91 KELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPL 154 (552)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~ 154 (552)
......+ ...+.............++.+++.+||+.+|.+||+
T Consensus 240 ~~~~~~~---------------------~~~i~~~~~~~p~~~~~~~~~li~~lL~~dp~~R~~ 282 (350)
T 1rdq_E 240 ADQPIQI---------------------YEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFG 282 (350)
T ss_dssp CSSHHHH---------------------HHHHHHCCCCCCTTCCHHHHHHHHHHSCSCTTTCTT
T ss_pred CCCHHHH---------------------HHHHHcCCCCCCCCCCHHHHHHHHHHhhcCHHhccC
Confidence 6443311 111111111111223456999999999999999998
No 232
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=99.47 E-value=7.9e-15 Score=142.09 Aligned_cols=112 Identities=16% Similarity=0.205 Sum_probs=74.6
Q ss_pred hhhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cc
Q 008820 13 VAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QF 89 (552)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf 89 (552)
..|+. |+++.+..... .....||+.|||||++ . ...+++++|||||||+||+|++|+ ||
T Consensus 157 ~~kl~Dfg~~~~~~~~~~---~~~~~gt~~y~aPE~~------~---------~~~~~~~~Di~slG~il~~l~~g~~pf 218 (321)
T 2a2a_A 157 HIKLIDFGLAHEIEDGVE---FKNIFGTPEFVAPEIV------N---------YEPLGLEADMWSIGVITYILLSGASPF 218 (321)
T ss_dssp CEEECCCTTCEECCTTCC---CCCCCSCGGGCCHHHH------T---------TCCCCTHHHHHHHHHHHHHHHHSCCSS
T ss_pred CEEEccCccceecCcccc---ccccCCCCCccCcccc------c---------CCCCCCccccHHHHHHHHHHHHCCCCC
Confidence 35565 55655554322 4677899999999998 2 255678999999999999999999 99
Q ss_pred hHHHhhhh-hhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 90 TKELIDYI-RCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 90 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
.......+ ..+... ....+..........+.+++.+||+.+|.+||++.++.+
T Consensus 219 ~~~~~~~~~~~i~~~------------------~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~ 272 (321)
T 2a2a_A 219 LGDTKQETLANITSV------------------SYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALR 272 (321)
T ss_dssp CCSSHHHHHHHHHTT------------------CCCCCHHHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHH
T ss_pred CCCCHHHHHHHHHhc------------------ccccChhhhcccCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 65433211 100000 000001111223445899999999999999999987765
No 233
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=99.47 E-value=1.1e-14 Score=141.99 Aligned_cols=107 Identities=14% Similarity=0.163 Sum_probs=72.4
Q ss_pred hhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cch
Q 008820 14 AKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFT 90 (552)
Q Consensus 14 ~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~ 90 (552)
.|++ |+++....... ....+.||+.|||||++ .+ ..++.++|+|||||+||||++|+ ||.
T Consensus 157 vkL~DFG~a~~~~~~~~--~~~~~~gt~~y~aPE~~------~~---------~~~~~~~DiwslG~il~ell~g~~Pf~ 219 (345)
T 1xjd_A 157 IKIADFGMCKENMLGDA--KTNTFCGTPDYIAPEIL------LG---------QKYNHSVDWWSFGVLLYEMLIGQSPFH 219 (345)
T ss_dssp EEECCCTTCBCCCCTTC--CBCCCCSCGGGCCHHHH------TT---------CCBCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred EEEeEChhhhhcccCCC--cccCCCCCcccCChhhh------cC---------CCCCChhhhHHHHHHHHHHhcCCCCCC
Confidence 4555 55654432222 25678999999999999 32 45678999999999999999999 997
Q ss_pred HHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchh-hH
Q 008820 91 KELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLT-NV 158 (552)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~-~~ 158 (552)
..+...+ ...+.............++.+++.+||+.+|.+||+.. ++
T Consensus 220 ~~~~~~~---------------------~~~i~~~~~~~p~~~s~~~~~li~~lL~~dp~~R~~~~~~i 267 (345)
T 1xjd_A 220 GQDEEEL---------------------FHSIRMDNPFYPRWLEKEAKDLLVKLFVREPEKRLGVRGDI 267 (345)
T ss_dssp CSSHHHH---------------------HHHHHHCCCCCCTTSCHHHHHHHHHHSCSSGGGSBTTBSCG
T ss_pred CCCHHHH---------------------HHHHHhCCCCCCcccCHHHHHHHHHHhcCCHhHcCCChHHH
Confidence 6443311 11111000111112344589999999999999999986 44
No 234
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=99.47 E-value=1.7e-14 Score=139.12 Aligned_cols=100 Identities=14% Similarity=0.091 Sum_probs=68.7
Q ss_pred hhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cch
Q 008820 14 AKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFT 90 (552)
Q Consensus 14 ~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~ 90 (552)
.|+. |+++.+... ...+.|||.|||||++ . ...++.++|+|||||+||||++|+ ||.
T Consensus 145 ~kL~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~------~---------~~~~~~~~DiwslG~il~ell~g~~pf~ 204 (318)
T 1fot_A 145 IKITDFGFAKYVPDV-----TYTLCGTPDYIAPEVV------S---------TKPYNKSIDWWSFGILIYEMLAGYTPFY 204 (318)
T ss_dssp EEECCCSSCEECSSC-----BCCCCSCTTTCCHHHH------T---------TCCBCTTHHHHHHHHHHHHHHHSSCTTC
T ss_pred EEEeecCcceecCCc-----cccccCCccccCHhHh------c---------CCCCCcccchhhhHHHHHHHHhCCCCCC
Confidence 4555 566655443 4567899999999999 2 245678999999999999999999 996
Q ss_pred HHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcc
Q 008820 91 KELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPL 154 (552)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~ 154 (552)
..+...+ ...+.............++.+++.+||+.+|.+||.
T Consensus 205 ~~~~~~~---------------------~~~i~~~~~~~p~~~~~~~~~li~~lL~~dp~~R~~ 247 (318)
T 1fot_A 205 DSNTMKT---------------------YEKILNAELRFPPFFNEDVKDLLSRLITRDLSQRLG 247 (318)
T ss_dssp CSSHHHH---------------------HHHHHHCCCCCCTTSCHHHHHHHHHHTCSCTTTCTT
T ss_pred CCCHHHH---------------------HHHHHhCCCCCCCCCCHHHHHHHHHHhccCHHHcCC
Confidence 5433311 111111111111223445899999999999999994
No 235
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=99.47 E-value=8.2e-15 Score=150.68 Aligned_cols=113 Identities=19% Similarity=0.217 Sum_probs=77.4
Q ss_pred hhhhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-C
Q 008820 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (552)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-p 88 (552)
...|+. |+|+.+..... .....||+.|||||++ ...+++++|||||||+||+|++|+ |
T Consensus 176 ~~~kl~DfG~a~~~~~~~~---~~~~~gt~~y~aPE~l----------------~~~~~~~~DiwslG~il~~ll~g~~p 236 (494)
T 3lij_A 176 ALIKIVDFGLSAVFENQKK---MKERLGTAYYIAPEVL----------------RKKYDEKCDVWSIGVILFILLAGYPP 236 (494)
T ss_dssp CCEEECCCTTCEECBTTBC---BCCCCSCTTTCCHHHH----------------TTCBCTHHHHHHHHHHHHHHHHSSCS
T ss_pred CcEEEEECCCCeECCCCcc---ccccCCCcCeeCHHHH----------------cccCCCchhHHHHHHHHHHHHhCCCC
Confidence 346666 66666655432 5678899999999998 235778999999999999999999 9
Q ss_pred chHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 89 FTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 89 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
|.+.....+. ..+.......+.+.+......+.+++.+||+.+|.+||++.++.+
T Consensus 237 f~~~~~~~~~-----------------~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~ 291 (494)
T 3lij_A 237 FGGQTDQEIL-----------------RKVEKGKYTFDSPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALE 291 (494)
T ss_dssp SCCSSHHHHH-----------------HHHHHTCCCCCSGGGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CCCCCHHHHH-----------------HHHHhCCCCCCchhcccCCHHHHHHHHHHCCCChhhCccHHHHhc
Confidence 9764433111 011110000111222334456899999999999999999887654
No 236
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=99.46 E-value=9.7e-15 Score=138.28 Aligned_cols=114 Identities=18% Similarity=0.184 Sum_probs=75.3
Q ss_pred hhhhhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-
Q 008820 11 KSVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE- 87 (552)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~- 87 (552)
...+|+. |+++.+.... ......||+.|+|||++ . +.+++++|||||||++|+|++|+
T Consensus 145 ~~~~~l~Dfg~~~~~~~~~---~~~~~~~t~~y~aPE~~------~----------~~~~~~~Di~slG~~l~~l~~g~~ 205 (277)
T 3f3z_A 145 DSPLKLIDFGLAARFKPGK---MMRTKVGTPYYVSPQVL------E----------GLYGPECDEWSAGVMMYVLLCGYP 205 (277)
T ss_dssp TCCEEECCCTTCEECCTTS---CBCCCCSCTTTCCHHHH------T----------TCBCTTHHHHHHHHHHHHHHHSSC
T ss_pred CCcEEEEecccceeccCcc---chhccCCCCCccChHHh------c----------ccCCchhhehhHHHHHHHHHHCCC
Confidence 3445666 5565555443 25667899999999998 2 34678999999999999999999
Q ss_pred CchHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 88 QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 88 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
||.......+. ..+.......+..........+.+++.+||+.+|.+||++.++.+
T Consensus 206 p~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 261 (277)
T 3f3z_A 206 PFSAPTDSEVM-----------------LKIREGTFTFPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALE 261 (277)
T ss_dssp SSCCSSHHHHH-----------------HHHHHCCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred CCCCCCHHHHH-----------------HHHHhCCCCCCchhhhcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 99654322110 000000000111111223445899999999999999999887654
No 237
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=99.46 E-value=1.3e-14 Score=142.98 Aligned_cols=114 Identities=18% Similarity=0.267 Sum_probs=73.9
Q ss_pred cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhhh
Q 008820 18 CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDY 96 (552)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~~ 96 (552)
|+++.+..... .....||+.|||||++...... ....+++++|||||||+||+|+||+ ||.......
T Consensus 245 G~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~---------~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~ 312 (365)
T 2y7j_A 245 GFSCHLEPGEK---LRELCGTPGYLAPEILKCSMDE---------THPGYGKEVDLWACGVILFTLLAGSPPFWHRRQIL 312 (365)
T ss_dssp TTCEECCTTCC---BCCCCSCGGGCCHHHHHHTTCT---------TSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH
T ss_pred CcccccCCCcc---cccCCCCCCccChhhccccccc---------cCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHH
Confidence 55666654432 4668899999999998432211 1235678999999999999999999 996533221
Q ss_pred hhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 97 IRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
+. ..+.......+.+.+......+.+++.+||+.+|.+||++.++.+
T Consensus 313 ~~-----------------~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~ 359 (365)
T 2y7j_A 313 ML-----------------RMIMEGQYQFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQ 359 (365)
T ss_dssp HH-----------------HHHHHTCCCCCHHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HH-----------------HHHHhCCCCCCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 10 000000000011112233445899999999999999999888765
No 238
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=99.46 E-value=4.2e-14 Score=138.81 Aligned_cols=125 Identities=15% Similarity=0.061 Sum_probs=83.0
Q ss_pred hhhcc--cccccccccchh-----hhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhh
Q 008820 13 VAKVG--CVGSRICDKEVG-----LFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI 85 (552)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~-----~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~llt 85 (552)
.+|+. |+++.+...... ...+...||+.|||||++ .+ ..+++++|||||||+||||++
T Consensus 199 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~------~~---------~~~~~~~Di~slG~il~el~~ 263 (352)
T 2jii_A 199 QVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLH------KG---------CGPSRRSDLQSLGYCMLKWLY 263 (352)
T ss_dssp EEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHH------TT---------CCCCHHHHHHHHHHHHHHHHH
T ss_pred eEEEecCcceeeccCCCccccccccccccccCCccccCHHHH------cc---------CCCCchhhHHHHHHHHHHHHh
Confidence 45666 556655544321 123566999999999999 33 457789999999999999999
Q ss_pred CC-CchHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhh------cCccccHHHHHHhhcccCCCCCcchhhH
Q 008820 86 GE-QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKF------GSEFVSLQLMFCQCLNFDPGCRPLLTNV 158 (552)
Q Consensus 86 g~-pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~l~~~~~~~l~~~p~~R~~~~~~ 158 (552)
|+ ||........ ............+.... .....++.+++.+||+.+|.+||++.++
T Consensus 264 g~~pf~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l 327 (352)
T 2jii_A 264 GFLPWTNCLPNTE----------------DIMKQKQKFVDKPGPFVGPCGHWIRPSETLQKYLKVVMALTYEEKPPYAML 327 (352)
T ss_dssp SCCTTGGGTTCHH----------------HHHHHHHHHHHSCCCEECTTSCEECCCHHHHHHHHHHHTCCTTCCCCHHHH
T ss_pred CCCCcccCCcCHH----------------HHHHHHHhccCChhhhhhhccccCCCcHHHHHHHHHHHhCChhhCCCHHHH
Confidence 99 9977431100 00011111111111100 1224569999999999999999999999
Q ss_pred HHHHHhhhcC
Q 008820 159 WKCIRELIIK 168 (552)
Q Consensus 159 ~~~l~~~~~~ 168 (552)
.+.+..++..
T Consensus 328 ~~~L~~~~~~ 337 (352)
T 2jii_A 328 RNNLEALLQD 337 (352)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 9999887643
No 239
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=99.46 E-value=3.2e-14 Score=144.67 Aligned_cols=131 Identities=14% Similarity=0.127 Sum_probs=86.4
Q ss_pred hhhhhhhcc--cccccccccchh-----hhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhh
Q 008820 9 VTKSVAKVG--CVGSRICDKEVG-----LFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILL 81 (552)
Q Consensus 9 ~~~~~~~~~--~~~~~~~~~~~~-----~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~ 81 (552)
+..-..|+. |+++.+...... .....+.||+.|||||++ .+ ..++.++|||||||+||
T Consensus 140 ~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~------~~---------~~~s~~sDvwSlGvil~ 204 (483)
T 3sv0_A 140 RRANQVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASVNTH------LG---------IEQSRRDDLESLGYVLM 204 (483)
T ss_dssp GGTTCEEECCCTTCEECBCTTTCCBCCCCCCCCCCSCTTTCCHHHH------TT---------CCCCHHHHHHHHHHHHH
T ss_pred CCCCeEEEEeCCcceeccCCccccccccccccccCCCccccCHHHh------cC---------CCCChHHHHHHHHHHHH
Confidence 344456666 667666554321 113378999999999999 33 55678999999999999
Q ss_pred hhhhCC-CchHHHhhhhhhccccCCCchhhhhhhhHHHHHH-HHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHH
Q 008820 82 SLLIGE-QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEK-VTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVW 159 (552)
Q Consensus 82 ~lltg~-pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~ 159 (552)
||++|+ ||......... ..+..+... ..............++.+++.+||+.+|.+||++.++.
T Consensus 205 elltG~~Pf~~~~~~~~~--------------~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~ 270 (483)
T 3sv0_A 205 YFLRGSLPWQGLKAGTKK--------------QKYEKISEKKVATSIEALCRGYPTEFASYFHYCRSLRFDDKPDYSYLK 270 (483)
T ss_dssp HHHHSSCTTSSCCCSSHH--------------HHHHHHHHHHHHSCHHHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHH
T ss_pred HHHhCCCCCccccchhHH--------------HHHHHHhhccccccHHHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHH
Confidence 999999 99653221000 001111111 11111111123445699999999999999999999999
Q ss_pred HHHHhhhcC
Q 008820 160 KCIRELIIK 168 (552)
Q Consensus 160 ~~l~~~~~~ 168 (552)
+.+..++..
T Consensus 271 ~~L~~l~~~ 279 (483)
T 3sv0_A 271 RLFRDLFIR 279 (483)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 998887643
No 240
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=99.46 E-value=3.5e-14 Score=136.71 Aligned_cols=129 Identities=15% Similarity=0.131 Sum_probs=74.9
Q ss_pred hhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cch
Q 008820 14 AKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFT 90 (552)
Q Consensus 14 ~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~ 90 (552)
.|+. |+++.+.... ..+...||+.|||||++ . ...++.++|||||||+||||++|+ ||.
T Consensus 159 ~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~------~---------~~~~~~~~DiwslG~il~~l~~g~~pf~ 220 (308)
T 3g33_A 159 VKLADFGLARIYSYQM---ALTPVVVTLWYRAPEVL------L---------QSTYATPVDMWSVGCIFAEMFRRKPLFC 220 (308)
T ss_dssp EEECSCSCTTTSTTCC---CSGGGGCCCSSCCHHHH------H---------TSCCCSTHHHHHHHHHHHHTTTSSCSCC
T ss_pred EEEeeCccccccCCCc---ccCCccccccccCchHH------c---------CCCCCchHHHHHHHHHHHHHHhCCCCCC
Confidence 4555 5565554333 25678999999999999 2 255778999999999999999999 995
Q ss_pred HHHhhh----hhhccccCCCchhhhh-hhhHHHHH-HHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 91 KELIDY----IRCVSTKASDDNIACL-GMYMAWME-KVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 91 ~~~~~~----~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
...... +........+..|... ........ ..+.............+.+++.+||+.+|.+||++.++.+
T Consensus 221 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 296 (308)
T 3g33_A 221 GNSEADQLGKIFDLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ 296 (308)
T ss_dssp CSSHHHHHHHHHHHHCCCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CCCHHHHHHHHHHHhCCCChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhc
Confidence 533221 1100011111111000 00000000 0000000111223445889999999999999999887654
No 241
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=99.46 E-value=3.5e-14 Score=142.23 Aligned_cols=145 Identities=19% Similarity=0.183 Sum_probs=76.3
Q ss_pred EEecchhhhhhhhhcc--cccccccccch-hhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhh
Q 008820 2 ILVMGRRVTKSVAKVG--CVGSRICDKEV-GLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVAC 78 (552)
Q Consensus 2 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~-~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~ 78 (552)
||+.+........|+. |+|+.+..... ........||+.|||||++ .| ...++.++|||||||
T Consensus 159 Ill~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~------~~--------~~~~~~~~DiwSlG~ 224 (405)
T 3rgf_A 159 ILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELL------LG--------ARHYTKAIDIWAIGC 224 (405)
T ss_dssp EEECCSSTTTTCEEECCTTCCC----------------CCCTTCCHHHH------TT--------CCSCCHHHHHHHHHH
T ss_pred eEEecCCCCCCcEEEEECCCceecCCCCcccccCCCceecCcccCchhh------cC--------CCcccchhhhHHHHH
Confidence 4554443444566777 66766554321 1235678999999999999 22 234678999999999
Q ss_pred hhhhhhhCC-CchHHH-------------hhhhhhccccCCCchhhhhhhhHHHHHHHHH-------------HHhhhhc
Q 008820 79 ILLSLLIGE-QFTKEL-------------IDYIRCVSTKASDDNIACLGMYMAWMEKVTY-------------LLENKFG 131 (552)
Q Consensus 79 ~l~~lltg~-pf~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~ 131 (552)
+||||+||+ ||.... +..+....+......|............... .......
T Consensus 225 il~ell~g~~pf~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (405)
T 3rgf_A 225 IFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKV 304 (405)
T ss_dssp HHHHHHHSSCTTCCCC------CCCCHHHHHHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTC
T ss_pred HHHHHHhCCCCCCCccccccccccchHHHHHHHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCC
Confidence 999999999 995322 1111111111112222211110000000000 0011111
Q ss_pred CccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 132 SEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 132 ~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
.....+.+++.+||+.+|.+||++.++.+
T Consensus 305 ~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~ 333 (405)
T 3rgf_A 305 KPDSKAFHLLQKLLTMDPIKRITSEQAMQ 333 (405)
T ss_dssp CTTSHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CCCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 12445889999999999999999887665
No 242
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=99.46 E-value=1.7e-14 Score=142.44 Aligned_cols=118 Identities=15% Similarity=0.207 Sum_probs=82.6
Q ss_pred hhhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhh-CC-C
Q 008820 13 VAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE-Q 88 (552)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~llt-g~-p 88 (552)
..|+. |+++.+.............||+.|||||++ . ...++.++|||||||+||||+| |+ |
T Consensus 241 ~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~------~---------~~~~~~~~DvwslG~il~ellt~g~~p 305 (370)
T 2psq_A 241 VMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEAL------F---------DRVYTHQSDVWSFGVLMWEIFTLGGSP 305 (370)
T ss_dssp CEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHH------H---------TCCCCHHHHHHHHHHHHHHHHTTSCCS
T ss_pred CEEEccccCCcccCcccceecccCCCcccceECHhHh------c---------CCCCCcHHHHHHHHHHHHHHHcCCCCC
Confidence 35666 667666655443335667889999999999 2 2456789999999999999999 99 9
Q ss_pred chHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHH-HhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHHhhh
Q 008820 89 FTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYL-LENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELI 166 (552)
Q Consensus 89 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~~~~ 166 (552)
|.......+. ..+... ..........++.+++.+||+.+|.+||++.++.+.+.+++
T Consensus 306 ~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il 363 (370)
T 2psq_A 306 YPGIPVEELF---------------------KLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 363 (370)
T ss_dssp STTCCGGGHH---------------------HHHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCCCHHHHH---------------------HHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 9764433111 000000 00111123445899999999999999999999999988875
No 243
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.46 E-value=1e-10 Score=113.38 Aligned_cols=238 Identities=8% Similarity=0.046 Sum_probs=157.5
Q ss_pred cceEEEEEc-CCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCccc
Q 008820 253 DCVTGLAVG-GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPL 331 (552)
Q Consensus 253 ~~V~~l~~s-~~~l~s~s~dg~I~iwd~~~~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~ 331 (552)
.....+++. ++.+++...++.|.+||..+++.+.++.. ......+++++++ .++++...++.|.+||..+.+....+
T Consensus 44 ~~~~~i~~~~~~lyv~~~~~~~v~viD~~t~~~~~~i~~-~~~p~~i~~~~~g-~lyv~~~~~~~v~~iD~~t~~~~~~i 121 (328)
T 3dsm_A 44 DVAQSMVIRDGIGWIVVNNSHVIFAIDINTFKEVGRITG-FTSPRYIHFLSDE-KAYVTQIWDYRIFIINPKTYEITGYI 121 (328)
T ss_dssp SCEEEEEEETTEEEEEEGGGTEEEEEETTTCCEEEEEEC-CSSEEEEEEEETT-EEEEEEBSCSEEEEEETTTTEEEEEE
T ss_pred ccceEEEEECCEEEEEEcCCCEEEEEECcccEEEEEcCC-CCCCcEEEEeCCC-eEEEEECCCCeEEEEECCCCeEEEEE
Confidence 346778888 55566666689999999999999998864 4678899998876 56555558999999999876543333
Q ss_pred cccccC-CCceeeeEEEEeeCCCEEEEee--CCCcEEEEECCCCceeEEecCCCCCeEEEEEe-CCEEEEEeC-C-----
Q 008820 332 KKWNEE-KDWRYSGIHALTTSGRYLYTGS--GDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC-NGVLYSGSR-D----- 401 (552)
Q Consensus 332 ~~~~~~-~~~~~~~~~~~~~~~~~l~sgs--~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~-~~~l~s~~~-d----- 401 (552)
..-... .......+ ++ +++.++++. .++.|.++|..+++.+..+... .....+.++ ++.++.++. +
T Consensus 122 ~~g~~~~~~~~p~~i-~~--~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g-~~p~~i~~~~dG~l~v~~~~~~~~~~ 197 (328)
T 3dsm_A 122 ECPDMDMESGSTEQM-VQ--YGKYVYVNCWSYQNRILKIDTETDKVVDELTIG-IQPTSLVMDKYNKMWTITDGGYEGSP 197 (328)
T ss_dssp ECTTCCTTTCBCCCE-EE--ETTEEEEEECTTCCEEEEEETTTTEEEEEEECS-SCBCCCEECTTSEEEEEBCCBCTTCS
T ss_pred EcCCccccCCCcceE-EE--ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcC-CCccceEEcCCCCEEEEECCCccCCc
Confidence 221100 00011112 23 455555554 4889999999999988887643 345678888 455544443 3
Q ss_pred -----CcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEECCCcEEEEeCCc--cee--eeecccceEEEEEe
Q 008820 402 -----GTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDK--FMK--SMQTHKGSVFAVFL 472 (552)
Q Consensus 402 -----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~~--~~~--~~~~h~~~v~~v~~ 472 (552)
+.|.++|..+++....+.......... ++++|+++.++++.. .|.+||... ... .+..+......+.+
T Consensus 198 ~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~-la~~~d~~~lyv~~~--~v~~~d~~t~~~~~~~~~~~~~~~p~gi~v 274 (328)
T 3dsm_A 198 YGYEAPSLYRIDAETFTVEKQFKFKLGDWPSE-VQLNGTRDTLYWINN--DIWRMPVEADRVPVRPFLEFRDTKYYGLTV 274 (328)
T ss_dssp SCBCCCEEEEEETTTTEEEEEEECCTTCCCEE-EEECTTSCEEEEESS--SEEEEETTCSSCCSSCSBCCCSSCEEEEEE
T ss_pred cccCCceEEEEECCCCeEEEEEecCCCCCcee-EEEecCCCEEEEEcc--EEEEEECCCCceeeeeeecCCCCceEEEEE
Confidence 789999999998887776532222333 799999999988765 899999653 211 11211344555554
Q ss_pred ---cCCEEEEE----eCCCeEEEEecCCCeeeeee
Q 008820 473 ---EGKWLFTG----GWDKTVSVQELAGDEFEEDV 500 (552)
Q Consensus 473 ---~~~~l~sg----s~dg~i~iwd~~~~~~~~~~ 500 (552)
++..+++. ..++.|.+||.. ++....+
T Consensus 275 dp~~g~lyva~~~~y~~~~~V~v~d~~-g~~~~~i 308 (328)
T 3dsm_A 275 NPNNGEVYVADAIDYQQQGIVYRYSPQ-GKLIDEF 308 (328)
T ss_dssp CTTTCCEEEEECTTSSSEEEEEEECTT-CCEEEEE
T ss_pred cCCCCeEEEEcccccccCCEEEEECCC-CCEEEEE
Confidence 45555555 568999999998 5554443
No 244
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=99.46 E-value=1.2e-14 Score=138.26 Aligned_cols=112 Identities=20% Similarity=0.243 Sum_probs=75.0
Q ss_pred hhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cch
Q 008820 14 AKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFT 90 (552)
Q Consensus 14 ~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~ 90 (552)
.|+. |++..+..... .....||+.|||||++ . ...+++++|||||||++|+|++|+ ||.
T Consensus 147 ~kl~Dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~------~---------~~~~~~~~Di~slG~~l~~l~~g~~pf~ 208 (284)
T 3kk8_A 147 VKLADFGLAIEVNDSEA---WHGFAGTPGYLSPEVL------K---------KDPYSKPVDIWACGVILYILLVGYPPFW 208 (284)
T ss_dssp EEECCCTTCEECCSSCB---CCCSCSCGGGCCHHHH------T---------TCCBCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred EEEeeceeeEEcccCcc---ccCCCCCcCCcCchhh------c---------CCCCCcccchHHHHHHHHHHHHCCCCCC
Confidence 5566 45555544432 4568899999999999 2 255678999999999999999999 995
Q ss_pred HHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 91 KELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
......+. ..........+.........++.+++.+||+.+|.+||++.++.+
T Consensus 209 ~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (284)
T 3kk8_A 209 DEDQHRLY-----------------AQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALK 261 (284)
T ss_dssp CSSHHHHH-----------------HHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred CCchhHHH-----------------HHHHhccccCCchhhcccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 54332110 000010000111112233456899999999999999999887665
No 245
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=99.46 E-value=2.9e-14 Score=141.18 Aligned_cols=113 Identities=17% Similarity=0.141 Sum_probs=71.7
Q ss_pred hhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cch
Q 008820 14 AKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFT 90 (552)
Q Consensus 14 ~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~ 90 (552)
.|+. |+|+....... ....++|||.|||||++ .+ ..++.++|+|||||+||||++|+ ||.
T Consensus 192 ikL~DFGla~~~~~~~~--~~~~~~gt~~Y~aPE~l------~~---------~~~~~~~DiwslGvllyell~G~~Pf~ 254 (396)
T 4dc2_A 192 IKLTDYGMCKEGLRPGD--TTSTFCGTPNYIAPEIL------RG---------EDYGFSVDWWALGVLMFEMMAGRSPFD 254 (396)
T ss_dssp EEECCCTTCBCCCCTTC--CBCCCCBCGGGCCHHHH------TT---------CCBCTHHHHHHHHHHHHHHHHSSCSST
T ss_pred EEEeecceeeecccCCC--ccccccCCcccCCchhh------cC---------CCCChHHHHHHHHHHHHHHHhCCCCCc
Confidence 4555 56654322222 26788999999999999 33 55678999999999999999999 996
Q ss_pred HHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcch
Q 008820 91 KELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLL 155 (552)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~ 155 (552)
........ .+ .........+.......+.....++.+++.+||+.+|.+||++
T Consensus 255 ~~~~~~~~---~~---------~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~lL~~dP~~R~~~ 307 (396)
T 4dc2_A 255 IVGSSDNP---DQ---------NTEDYLFQVILEKQIRIPRSLSVKAASVLKSFLNKDPKERLGC 307 (396)
T ss_dssp TTTC------------------CCHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSCTTTSTTC
T ss_pred cccccccc---ch---------hhHHHHHHHHhccccCCCCcCCHHHHHHHHHHhcCCHhHcCCC
Confidence 42211000 00 0011122222211112222345569999999999999999996
No 246
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=99.45 E-value=8.4e-15 Score=144.65 Aligned_cols=113 Identities=19% Similarity=0.166 Sum_probs=75.8
Q ss_pred hhhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cc
Q 008820 13 VAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QF 89 (552)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf 89 (552)
..|+. |+++.+..... .....||+.|||||++ . ...+++++|||||||+||||++|+ ||
T Consensus 227 ~~kl~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~------~---------~~~~~~~~DiwslG~il~elltg~~pf 288 (373)
T 2x4f_A 227 QIKIIDFGLARRYKPREK---LKVNFGTPEFLAPEVV------N---------YDFVSFPTDMWSVGVIAYMLLSGLSPF 288 (373)
T ss_dssp EEEECCCSSCEECCTTCB---CCCCCSSCTTCCHHHH------T---------TCBCCHHHHHHHHHHHHHHHHHSSCTT
T ss_pred cEEEEeCCCceecCCccc---cccccCCCcEeChhhc------c---------CCCCCcHHhHHHHHHHHHHHHhCCCCC
Confidence 35566 66766655443 4556799999999998 2 255678999999999999999999 99
Q ss_pred hHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 90 TKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
.+.....+. ..+.......+.........++.+++.+||+.+|.+||++.++.+
T Consensus 289 ~~~~~~~~~-----------------~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~ 342 (373)
T 2x4f_A 289 LGDNDAETL-----------------NNILACRWDLEDEEFQDISEEAKEFISKLLIKEKSWRISASEALK 342 (373)
T ss_dssp CCSSHHHHH-----------------HHHHHTCCCSCSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred CCCCHHHHH-----------------HHHHhccCCCChhhhccCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 654322110 000000000011112233456999999999999999999988766
No 247
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=99.45 E-value=1.8e-14 Score=146.08 Aligned_cols=103 Identities=17% Similarity=0.201 Sum_probs=68.5
Q ss_pred hhhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cc
Q 008820 13 VAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QF 89 (552)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf 89 (552)
.+|+. |+|+....... ....+.||+.|||||++ . ...++.++|||||||+||||++|+ ||
T Consensus 287 ~~kl~DFG~a~~~~~~~~--~~~~~~gt~~y~aPE~~------~---------~~~~~~~~DiwslG~il~ell~g~~Pf 349 (446)
T 4ejn_A 287 HIKITDFGLCKEGIKDGA--TMKTFCGTPEYLAPEVL------E---------DNDYGRAVDWWGLGVVMYEMMCGRLPF 349 (446)
T ss_dssp CEEECCCCCCCTTCC-------CCSSSCGGGCCHHHH------H---------TSCCCTHHHHHHHHHHHHHHHHSSCSS
T ss_pred CEEEccCCCceeccCCCc--ccccccCCccccCHhhc------C---------CCCCCCccchhhhHHHHHHHhhCCCCC
Confidence 35666 56655433332 36778999999999999 2 255678999999999999999999 99
Q ss_pred hHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCc
Q 008820 90 TKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRP 153 (552)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~ 153 (552)
.......+. ..+.............++.+++.+||+.+|.+||
T Consensus 350 ~~~~~~~~~---------------------~~i~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~ 392 (446)
T 4ejn_A 350 YNQDHEKLF---------------------ELILMEEIRFPRTLGPEAKSLLSGLLKKDPKQRL 392 (446)
T ss_dssp CCSSHHHHH---------------------HHHHHCCCCCCTTSCHHHHHHHHHHTCSSTTTST
T ss_pred CCCCHHHHH---------------------HHHHhCCCCCCccCCHHHHHHHHHHcccCHHHhC
Confidence 654433111 1111001111122344689999999999999999
No 248
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=99.45 E-value=2e-14 Score=139.41 Aligned_cols=119 Identities=13% Similarity=0.157 Sum_probs=80.6
Q ss_pred hhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhh-CC-Cc
Q 008820 14 AKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE-QF 89 (552)
Q Consensus 14 ~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~llt-g~-pf 89 (552)
.|+. |+++.+.........+...||+.|||||++. ...+++++|||||||+||||+| |+ ||
T Consensus 154 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~---------------~~~~~~~~Di~slG~~l~el~~~g~~p~ 218 (325)
T 3kex_A 154 VQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIH---------------FGKYTHQSDVWSYGVTVWELMTFGAEPY 218 (325)
T ss_dssp EEECSCSGGGGSCCCTTCCC-----CCTTTSCHHHHH---------------HCCCCHHHHHHHHHHHHHHHHTTSCCTT
T ss_pred EEECCCCcccccCcccccccccCCCCcccccChHHhc---------------cCCCChhhHhHHhHHHHHHHHhCCCCCc
Confidence 4555 6677665554444467788999999999992 2456789999999999999999 99 99
Q ss_pred hHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHH-HhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHHhhhcC
Q 008820 90 TKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYL-LENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELIIK 168 (552)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~~~~~~ 168 (552)
.......+. ..+... ..........++.+++.+||+.+|.+||++.++.+.+..+...
T Consensus 219 ~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~~ 277 (325)
T 3kex_A 219 AGLRLAEVP---------------------DLLEKGERLAQPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMARD 277 (325)
T ss_dssp TTSCTTHHH---------------------HHHHTTCBCCCCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTTS
T ss_pred cccCHHHHH---------------------HHHHcCCCCCCCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 764433110 000000 0111122344688999999999999999999999999887643
No 249
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=99.45 E-value=1.1e-14 Score=140.05 Aligned_cols=126 Identities=16% Similarity=0.194 Sum_probs=74.9
Q ss_pred hhhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cc
Q 008820 13 VAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QF 89 (552)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf 89 (552)
.+|+. |+++...............||+.|||||++. + .....++.++|||||||+||||+||+ ||
T Consensus 170 ~~kl~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~------~------~~~~~~~~~~Di~slG~il~elltg~~Pf 237 (307)
T 3lb7_A 170 TVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIR------M------QDNNPFSFQSDVYSYGIVLYELMTGELPY 237 (307)
T ss_dssp CEEECCCCSSCC------------CCCCTTSCCHHHHH------C------CSSCCCCHHHHHHHHHHHHHHHHHSSCTT
T ss_pred CEEEccCCCceecccccccccccCCCCCcceECcceee------c------cCCCCCCchhhHHHHHHHHHHHHhCCCCC
Confidence 34555 5565444333233456778999999999982 1 01245678999999999999999999 99
Q ss_pred hHHHhhhhhhccccCCCchhhhhhhhHHHHHHH-HHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHHhhh
Q 008820 90 TKELIDYIRCVSTKASDDNIACLGMYMAWMEKV-TYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELI 166 (552)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~~~~ 166 (552)
......... ........ ..............+.+++.+||+.+|.+||++.++.+.+..+.
T Consensus 238 ~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~ 299 (307)
T 3lb7_A 238 SHINNRDQI----------------IFMVGRGYASPDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQ 299 (307)
T ss_dssp TTCCCHHHH----------------HHHHHHTCCCCCSTTSCSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHH
T ss_pred ccCCcHHHH----------------HHHHhcCCCCcchhhhhcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHHHH
Confidence 653222000 00000000 00000111223446999999999999999999999998887664
No 250
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=99.45 E-value=6.5e-15 Score=146.88 Aligned_cols=119 Identities=17% Similarity=0.196 Sum_probs=71.3
Q ss_pred hhhhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-C
Q 008820 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (552)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-p 88 (552)
...|+. |+++.+.... ..+...||+.|||||++ . ...++.++|||||||+||||++|+ |
T Consensus 201 ~~~kl~DFG~a~~~~~~~---~~~~~~gt~~y~aPE~~------~---------~~~~~~~~DiwslG~il~ell~g~~p 262 (400)
T 1nxk_A 201 AILKLTDFGFAKETTSHN---SLTTPCYTPYYVAPEVL------G---------PEKYDKSCDMWSLGVIMYILLCGYPP 262 (400)
T ss_dssp CCEEECCCTTCEECC--------------CTTCCGGGS------C---------CCCSSSHHHHHHHHHHHHHHHHSSCS
T ss_pred ccEEEEecccccccCCCC---ccccCCCCCCccCHhhc------C---------CCCCCCcccHHHHHHHHHHHHhCCCC
Confidence 445666 6666555433 25678999999999998 2 356788999999999999999999 9
Q ss_pred chHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHH
Q 008820 89 FTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKC 161 (552)
Q Consensus 89 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~ 161 (552)
|.......+. + .....+.......+...+.....++.+++.+||+.+|.+||++.++.+.
T Consensus 263 f~~~~~~~~~-------~------~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 322 (400)
T 1nxk_A 263 FYSNHGLAIS-------P------GMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 322 (400)
T ss_dssp CCCCTTCSSC-------C------SHHHHHHHTCCCCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred CCCCcccccc-------H------HHHHHHHcCcccCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 9764322100 0 0001111100011111122344569999999999999999998887664
No 251
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=99.45 E-value=1.1e-14 Score=141.31 Aligned_cols=118 Identities=12% Similarity=0.120 Sum_probs=78.7
Q ss_pred hhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhh-CC-Cc
Q 008820 14 AKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE-QF 89 (552)
Q Consensus 14 ~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~llt-g~-pf 89 (552)
+|+. |+++.+.............||+.|||||++. ...+++++|||||||+||||+| |+ ||
T Consensus 156 ~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~---------------~~~~~~~~Di~slG~il~ellt~g~~p~ 220 (327)
T 3poz_A 156 VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL---------------HRIYTHQSDVWSYGVTVWELMTFGSKPY 220 (327)
T ss_dssp EEECCTTHHHHHTTTCC-------CCCGGGSCHHHHH---------------HCCCCHHHHHHHHHHHHHHHHTTSCCTT
T ss_pred EEEccCcceeEccCCcccccccCCCccccccChHHhc---------------cCCCCchhhhhhhHHHHHHHHhcCCCCc
Confidence 5555 5566655544433456677899999999992 2456789999999999999999 99 99
Q ss_pred hHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHH-HhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHHhhhc
Q 008820 90 TKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYL-LENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELII 167 (552)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~~~~~ 167 (552)
.......+. ..+... ...........+.+++.+||+.+|.+||++.++.+.+..+..
T Consensus 221 ~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~ 278 (327)
T 3poz_A 221 DGIPASEIS---------------------SILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 278 (327)
T ss_dssp TTCCGGGHH---------------------HHHHTTCCCCCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHT
T ss_pred cCCCHHHHH---------------------HHHHcCCCCCCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 764433211 000000 001112234458899999999999999999999998887764
No 252
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=99.45 E-value=1.4e-14 Score=148.77 Aligned_cols=112 Identities=19% Similarity=0.171 Sum_probs=73.8
Q ss_pred hhhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cc
Q 008820 13 VAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QF 89 (552)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf 89 (552)
..|+. |+++.+..... .....|||.|||||++ . +.+++++|||||||+||+|++|+ ||
T Consensus 162 ~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~------~----------~~~~~~~DiwslG~il~~ll~g~~pf 222 (486)
T 3mwu_A 162 DIKIIDFGLSTCFQQNTK---MKDRIGTAYYIAPEVL------R----------GTYDEKCDVWSAGVILYILLSGTPPF 222 (486)
T ss_dssp CEEECSCSCTTTBCCC-------CCTTGGGGCCGGGG------G----------SCCCHHHHHHHHHHHHHHHHHSSCSS
T ss_pred CEEEEECCcCeECCCCCc---cCCCcCCCCCCCHHHh------C----------CCCCchhhHHHHHHHHHHHHhCCCCC
Confidence 35666 56665554432 5677899999999998 2 34678999999999999999999 99
Q ss_pred hHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 90 TKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
.+.....+. ..+.......+.+.+.....++.+++.+||+.+|.+||++.++.+
T Consensus 223 ~~~~~~~~~-----------------~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~ 276 (486)
T 3mwu_A 223 YGKNEYDIL-----------------KRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLE 276 (486)
T ss_dssp CCSSHHHHH-----------------HHHHHTCCCSCSGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred CCCCHHHHH-----------------HHHHhCCCCCCCcccCCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 654333110 000000000011122233456899999999999999999887766
No 253
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=99.44 E-value=2.2e-14 Score=137.87 Aligned_cols=115 Identities=20% Similarity=0.255 Sum_probs=72.3
Q ss_pred hhhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cc
Q 008820 13 VAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QF 89 (552)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf 89 (552)
++|+. |+++.+... .....||+.|||||++ .+ ..+++++|||||||+||||+||+ ||
T Consensus 144 ~~kl~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~------~~---------~~~~~~~Di~slG~il~el~~g~~p~ 203 (307)
T 2eva_A 144 VLKICDFGTACDIQTH-----MTNNKGSAAWMAPEVF------EG---------SNYSEKCDVFSWGIILWEVITRRKPF 203 (307)
T ss_dssp EEEECCCCC-----------------CCTTSSCHHHH------TC---------CCCCTHHHHHHHHHHHHHHHHTCCTT
T ss_pred EEEEcccccccccccc-----cccCCCCCceEChhhh------CC---------CCCCcHHHHHHHHHHHHHHHHCCCCc
Confidence 35666 445444333 3456799999999999 32 56778999999999999999999 99
Q ss_pred hHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHH-HHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHHhhh
Q 008820 90 TKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTY-LLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELI 166 (552)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~~~~ 166 (552)
........ ........ ............+.+++.+||+.+|.+||++.++.+.+..+.
T Consensus 204 ~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~ 262 (307)
T 2eva_A 204 DEIGGPAF-------------------RIMWAVHNGTRPPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLM 262 (307)
T ss_dssp TTTCSSHH-------------------HHHHHHHTTCCCCCBTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHG
T ss_pred hhhCccHH-------------------HHHHHHhcCCCCCcccccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHH
Confidence 65321100 00000000 000111123445899999999999999999999999888765
No 254
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=99.44 E-value=2.3e-14 Score=142.29 Aligned_cols=60 Identities=27% Similarity=0.594 Sum_probs=47.5
Q ss_pred hhhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cc
Q 008820 13 VAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QF 89 (552)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf 89 (552)
..|+. |+|+.+... .....||+.|||||++ .| ..+++++|||||||+||||+||+ ||
T Consensus 199 ~~kL~DFG~a~~~~~~-----~~~~~~t~~y~aPE~~------~~---------~~~~~~~DiwSlG~il~elltg~~pf 258 (382)
T 2vx3_A 199 AIKIVDFGSSCQLGQR-----IYQYIQSRFYRSPEVL------LG---------MPYDLAIDMWSLGCILVEMHTGEPLF 258 (382)
T ss_dssp CEEECCCTTCEETTCC-----CCSSCSCGGGCCHHHH------TT---------CCCCTHHHHHHHHHHHHHHHHSSCSS
T ss_pred cEEEEeccCceecccc-----cccccCCccccChHHH------cC---------CCCCcHHHHHHHHHHHHHHHhCCCCC
Confidence 45666 556555443 4568999999999999 33 45779999999999999999999 99
Q ss_pred hHH
Q 008820 90 TKE 92 (552)
Q Consensus 90 ~~~ 92 (552)
.+.
T Consensus 259 ~~~ 261 (382)
T 2vx3_A 259 SGA 261 (382)
T ss_dssp CCS
T ss_pred CCC
Confidence 653
No 255
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=99.44 E-value=7.7e-15 Score=145.30 Aligned_cols=112 Identities=18% Similarity=0.197 Sum_probs=74.5
Q ss_pred hhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cch
Q 008820 14 AKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFT 90 (552)
Q Consensus 14 ~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~ 90 (552)
.|+. |+++.+..... .....||+.|||||++ . ...++.++|||||||+||||+||+ ||.
T Consensus 190 vkL~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~------~---------~~~~~~~~DiwSlG~il~elltg~~Pf~ 251 (387)
T 1kob_A 190 VKIIDFGLATKLNPDEI---VKVTTATAEFAAPEIV------D---------REPVGFYTDMWAIGVLGYVLLSGLSPFA 251 (387)
T ss_dssp EEECCCTTCEECCTTSC---EEEECSSGGGCCHHHH------T---------TCCBCHHHHHHHHHHHHHHHHHSCCSSC
T ss_pred eEEEecccceecCCCcc---eeeeccCCCccCchhc------c---------CCCCCCcccEeeHhHHHHHHHhCCCCCC
Confidence 4555 66666655432 4556899999999999 2 245678999999999999999999 996
Q ss_pred HHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 91 KELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
......+. ..+.......+.........++.+++.+||+.+|.+||++.++.+
T Consensus 252 ~~~~~~~~-----------------~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~ 304 (387)
T 1kob_A 252 GEDDLETL-----------------QNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALE 304 (387)
T ss_dssp CSSHHHHH-----------------HHHHHCCCCCCSSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred CCCHHHHH-----------------HHHHhCCCCCCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhh
Confidence 54322110 000000000011111223446899999999999999999887655
No 256
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=99.44 E-value=1.2e-14 Score=141.15 Aligned_cols=113 Identities=18% Similarity=0.174 Sum_probs=69.9
Q ss_pred hhhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cc
Q 008820 13 VAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QF 89 (552)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf 89 (552)
..|+. |+++.+.... ......||+.|||||++ . ...+++++|||||||+||+|++|+ ||
T Consensus 172 ~~kL~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~------~---------~~~~~~~~DiwslG~il~~ll~g~~pf 233 (327)
T 3lm5_A 172 DIKIVDFGMSRKIGHAC---ELREIMGTPEYLAPEIL------N---------YDPITTATDMWNIGIIAYMLLTHTSPF 233 (327)
T ss_dssp CEEECCGGGCEEC------------CCCGGGCCHHHH------T---------TCCCCTHHHHHHHHHHHHHHHHSSCSS
T ss_pred cEEEeeCccccccCCcc---ccccccCCcCccCCeee------c---------CCCCCchhhHHHHHHHHHHHHhCCCCC
Confidence 34555 5565554433 25668899999999999 2 356778999999999999999999 99
Q ss_pred hHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 90 TKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
......... ..+.......+..........+.+++.+||+.+|.+||++.++.+
T Consensus 234 ~~~~~~~~~-----------------~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~ 287 (327)
T 3lm5_A 234 VGEDNQETY-----------------LNISQVNVDYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLS 287 (327)
T ss_dssp CCSSHHHHH-----------------HHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred CCCCchHHH-----------------HHHHhcccccCchhhcccCHHHHHHHHHHcCCChhhCcCHHHHhC
Confidence 654332110 000000000011111223445889999999999999999887654
No 257
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=99.44 E-value=2.1e-14 Score=147.46 Aligned_cols=109 Identities=12% Similarity=0.106 Sum_probs=73.9
Q ss_pred hhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cch
Q 008820 14 AKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFT 90 (552)
Q Consensus 14 ~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~ 90 (552)
.|+. |+++.+...... ...+.|||.|||||++ .| ..++.++|+|||||+||||+||+ ||.
T Consensus 328 vkL~DFGla~~~~~~~~~--~~~~~GT~~Y~APE~l------~~---------~~~~~~~DiwSlGvilyelltG~~PF~ 390 (543)
T 3c4z_A 328 VRISDLGLAVELKAGQTK--TKGYAGTPGFMAPELL------LG---------EEYDFSVDYFALGVTLYEMIAARGPFR 390 (543)
T ss_dssp EEECCCTTCEECCTTCCC--BCCCCSCTTTSCHHHH------TT---------CCBCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred EEEeecceeeeccCCCcc--cccccCCccccChhhh------cC---------CCCChHHhcCcchHHHHHHHhCCCCCC
Confidence 4555 667666554332 4567999999999999 32 45778999999999999999999 997
Q ss_pred HHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchh
Q 008820 91 KELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLT 156 (552)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~ 156 (552)
...... ....+...+..............+.+++.+||+.+|.+||+..
T Consensus 391 ~~~~~~-----------------~~~~~~~~i~~~~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~ 439 (543)
T 3c4z_A 391 ARGEKV-----------------ENKELKQRVLEQAVTYPDKFSPASKDFCEALLQKDPEKRLGFR 439 (543)
T ss_dssp CTTCCC-----------------CHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHSCSSGGGSCCCB
T ss_pred CCccch-----------------hHHHHHHHHhhcccCCCcccCHHHHHHHHHhccCCHhHCCCCc
Confidence 643110 0111222222111112223455699999999999999999863
No 258
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=99.44 E-value=4e-14 Score=138.15 Aligned_cols=113 Identities=17% Similarity=0.141 Sum_probs=70.5
Q ss_pred hhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cch
Q 008820 14 AKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFT 90 (552)
Q Consensus 14 ~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~ 90 (552)
.|+. |+++....... ..+.+.||+.|||||++ .+ ..++.++|+|||||+||||++|+ ||.
T Consensus 149 ~kL~DFG~a~~~~~~~~--~~~~~~gt~~y~aPE~~------~~---------~~~~~~~DiwslG~il~ell~g~~pf~ 211 (345)
T 3a8x_A 149 IKLTDYGMCKEGLRPGD--TTSTFCGTPNYIAPEIL------RG---------EDYGFSVDWWALGVLMFEMMAGRSPFD 211 (345)
T ss_dssp EEECCGGGCBCSCCTTC--CBCCCCSCGGGCCHHHH------TT---------CCBCTHHHHHHHHHHHHHHHHSSCTTT
T ss_pred EEEEeccccccccCCCC--cccccCCCccccCcccc------CC---------CCCChHHhHHHHHHHHHHHHhCCCCcC
Confidence 4555 55654332222 25678999999999999 22 45678999999999999999999 996
Q ss_pred HHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcch
Q 008820 91 KELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLL 155 (552)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~ 155 (552)
......-. .+ .........+.............++.+++.+||+.+|.+||++
T Consensus 212 ~~~~~~~~---~~---------~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~lL~~dP~~R~~~ 264 (345)
T 3a8x_A 212 IVGSSDNP---DQ---------NTEDYLFQVILEKQIRIPRSLSVKAASVLKSFLNKDPKERLGC 264 (345)
T ss_dssp TTTC-------------------CHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSSTTTSTTC
T ss_pred Cccccccc---cc---------ccHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhcCCHhHCCCC
Confidence 42111000 00 0001111111111111112244568999999999999999996
No 259
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=99.43 E-value=2.2e-14 Score=138.81 Aligned_cols=109 Identities=13% Similarity=0.174 Sum_probs=73.7
Q ss_pred hhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cch
Q 008820 14 AKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFT 90 (552)
Q Consensus 14 ~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~ 90 (552)
.|+. |+++.+..... ......||+.|||||++ . ...+++++|||||||+||||++|+ ||.
T Consensus 180 ~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~------~---------~~~~~~~~Dv~slG~il~el~~g~~pf~ 242 (321)
T 2c30_A 180 VKLSDFGFCAQISKDVP--KRKSLVGTPYWMAPEVI------S---------RSLYATEVDIWSLGIMVIEMVDGEPPYF 242 (321)
T ss_dssp EEECCCTTCEECCSSSC--CBCCCCSCGGGCCHHHH------T---------TCCBCTHHHHHHHHHHHHHHHHSSCTTT
T ss_pred EEEeeeeeeeecccCcc--ccccccCCccccCHhhh------c---------CCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence 4555 55555544322 24677899999999999 2 356778999999999999999999 996
Q ss_pred HHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHh---hhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 91 KELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLE---NKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
......+. ......+. .........+.+++.+||+.+|.+||++.++.+
T Consensus 243 ~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 294 (321)
T 2c30_A 243 SDSPVQAM---------------------KRLRDSPPPKLKNSHKVSPVLRDFLERMLVRDPQERATAQELLD 294 (321)
T ss_dssp TSCHHHHH---------------------HHHHHSSCCCCTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred CCCHHHHH---------------------HHHhcCCCCCcCccccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 54322110 00000000 011123345899999999999999999887655
No 260
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=99.43 E-value=2.5e-14 Score=138.30 Aligned_cols=119 Identities=16% Similarity=0.248 Sum_probs=81.1
Q ss_pred hhhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhh-CC-C
Q 008820 13 VAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE-Q 88 (552)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~llt-g~-p 88 (552)
..|+. |+++.+.............||+.|||||++. ...++.++|||||||+||||+| |+ |
T Consensus 186 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~---------------~~~~~~~~Di~slG~il~~l~t~g~~p 250 (316)
T 2xir_A 186 VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIF---------------DRVYTIQSDVWSFGVLLWEIFSLGASP 250 (316)
T ss_dssp CEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHH---------------HCCCCHHHHHHHHHHHHHHHHTTSCCS
T ss_pred CEEECCCccccccccCccceeccCCCcceeecCchhhc---------------cccccchhHHHHHHHHHHHHHhCCCCC
Confidence 35555 5555554443333356788999999999992 2456789999999999999998 99 9
Q ss_pred chHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHH-HhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHHhhh
Q 008820 89 FTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYL-LENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELI 166 (552)
Q Consensus 89 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~~~~ 166 (552)
|....... ......... ...........+.+++.+||+.+|.+||++.++.+.+..++
T Consensus 251 ~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~ 309 (316)
T 2xir_A 251 YPGVKIDE--------------------EFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 309 (316)
T ss_dssp STTCCCSH--------------------HHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CcccchhH--------------------HHHHHhccCccCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 96633220 000000000 01111223446999999999999999999999999988876
No 261
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=99.43 E-value=2.7e-14 Score=139.84 Aligned_cols=118 Identities=16% Similarity=0.113 Sum_probs=72.0
Q ss_pred hhhcc--cccccccccch--hhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-
Q 008820 13 VAKVG--CVGSRICDKEV--GLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE- 87 (552)
Q Consensus 13 ~~~~~--~~~~~~~~~~~--~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~- 87 (552)
.+|++ |+++.+..... ........||+.|||||++ .+ ....+++++|||||||+||||++|+
T Consensus 208 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~------~~-------~~~~~~~~~DiwslG~il~el~~g~~ 274 (345)
T 3hko_A 208 EIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVL------NT-------TNESYGPKCDAWSAGVLLHLLLMGAV 274 (345)
T ss_dssp CEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHH------TC-------SSSCCCTHHHHHHHHHHHHHHHHSSC
T ss_pred eEEEeeccccccccccCccccccccccCCCccccCchhh------cc-------CCCCCCcHHHHHHHHHHHHHHHHCCC
Confidence 35565 55555433221 1135678899999999998 22 2356778999999999999999999
Q ss_pred CchHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 88 QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 88 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
||......... ..........+.+........+.+++.+||+.+|.+||++.++.+
T Consensus 275 pf~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~ 330 (345)
T 3hko_A 275 PFPGVNDADTI-----------------SQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRALQ 330 (345)
T ss_dssp SSCCSSHHHHH-----------------HHHHHCCCCTTSGGGGGSCHHHHHHHHHHSCSCTTTSCCHHHHHH
T ss_pred CCCCCChHHHH-----------------HHHHhcccccCCcccccCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 99653322110 000000000011111123445899999999999999999988765
No 262
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=99.43 E-value=2.5e-14 Score=138.85 Aligned_cols=119 Identities=12% Similarity=0.111 Sum_probs=73.7
Q ss_pred hhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhh-CC-Cc
Q 008820 14 AKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE-QF 89 (552)
Q Consensus 14 ~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~llt-g~-pf 89 (552)
+|+. |+++.+.............||+.|||||++. ...+++++|||||||+||||++ |+ ||
T Consensus 156 ~kL~DfG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~---------------~~~~~~~~Di~slG~il~ell~~g~~p~ 220 (327)
T 3lzb_A 156 VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL---------------HRIYTHQSDVWSYGVTVWELMTFGSKPY 220 (327)
T ss_dssp EEECCTTC----------------CCCGGGSCHHHHH---------------HCCCCHHHHHHHHHHHHHHHHTTSCCTT
T ss_pred EEEccCcceeEccCccccccccCCCccccccCHHHHc---------------CCCCChHHHHHHHHHHHHHHHHCCCCCC
Confidence 4555 6666665554444456677899999999992 2456789999999999999999 99 99
Q ss_pred hHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHHhhhc
Q 008820 90 TKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELII 167 (552)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~~~~~ 167 (552)
.......+. ...... ...........++.+++.+||+.+|.+||++.++.+.+..+..
T Consensus 221 ~~~~~~~~~-----------------~~~~~~---~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 278 (327)
T 3lzb_A 221 DGIPASEIS-----------------SILEKG---ERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMAR 278 (327)
T ss_dssp TTCCGGGHH-----------------HHHHTT---CCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHT
T ss_pred CCCCHHHHH-----------------HHHHcC---CCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence 764433111 000000 0001112234458999999999999999999999999888763
No 263
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.43 E-value=5.6e-11 Score=128.05 Aligned_cols=242 Identities=11% Similarity=0.085 Sum_probs=156.9
Q ss_pred cCccceEEEEEc--CCEEEEEeCCC-----cEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCc------
Q 008820 250 GHRDCVTGLAVG--GGFLFSSSFDK-----SIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGG------ 316 (552)
Q Consensus 250 ~H~~~V~~l~~s--~~~l~s~s~dg-----~I~iwd~~~~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~------ 316 (552)
+|...+.+++|+ |++|+.++.++ .|++||+.+++.......+ ..+..++|+|++..+ +.++.++.
T Consensus 122 ~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~-~~~~~~~wspDg~~l-~~~~~~~~~~~~~~ 199 (710)
T 2xdw_A 122 DGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLER-VKFSCMAWTHDGKGM-FYNAYPQQDGKSDG 199 (710)
T ss_dssp TSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEE-ECSCCEEECTTSSEE-EEEECCCCSSCCSS
T ss_pred CCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccC-cccceEEEEeCCCEE-EEEEECCccccccc
Confidence 355578899999 88888776543 8999999999877643222 236789999988755 44545544
Q ss_pred ----------EEEEeCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeC-----CCcEEEEECCC------Cc-e
Q 008820 317 ----------IFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSG-----DRTIKAWSLLD------GT-L 374 (552)
Q Consensus 317 ----------i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~-----dg~i~iwd~~~------~~-~ 374 (552)
|++|++.++.....+ .+.............++++|++|+.++. +..|++||+.+ +. .
T Consensus 200 ~~~~~~~~~~v~~~~l~t~~~~~~~-v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~ 278 (710)
T 2xdw_A 200 TETSTNLHQKLYYHVLGTDQSEDIL-CAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILK 278 (710)
T ss_dssp SCCCCCCCCEEEEEETTSCGGGCEE-EECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCC
T ss_pred cccccCCCCEEEEEECCCCcccceE-EeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccc
Confidence 999999876432111 1111110111123478999998877664 57899999976 43 3
Q ss_pred eEEecCCCCCeEEEEEe--CCEEEEEeCC----CcEEEEECCCCce--eEEEecCCCCceEEEEEEcCCCCEEEEEECCC
Q 008820 375 SCTMSGHKSAVSTLAVC--NGVLYSGSRD----GTIRLWSLSDHSL--LTVLEEDSSGAVSSVLSLTAVQHTLVVSHESG 446 (552)
Q Consensus 375 ~~~~~~h~~~v~~l~~~--~~~l~s~~~d----g~i~iwd~~~~~~--~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg 446 (552)
...+..+...+... |+ ++.|+..+.+ +.|.+||+.++.. ...+..+........+.+++++.++++...++
T Consensus 279 ~~~l~~~~~~~~~~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g 357 (710)
T 2xdw_A 279 WVKLIDNFEGEYDY-VTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDV 357 (710)
T ss_dssp CEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETT
T ss_pred eEEeeCCCCcEEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECC
Confidence 55666666666553 44 5555555543 3699999987752 34444443322333356777778888888888
Q ss_pred c--EEEEeC--CcceeeeecccceEEEEEe--cCCEEEEE-e---CCCeEEEEecCCCe
Q 008820 447 S--IKVWRN--DKFMKSMQTHKGSVFAVFL--EGKWLFTG-G---WDKTVSVQELAGDE 495 (552)
Q Consensus 447 ~--i~iwd~--~~~~~~~~~h~~~v~~v~~--~~~~l~sg-s---~dg~i~iwd~~~~~ 495 (552)
. |++||. ++....+..+.+.+..+++ ++..++.. + ..++|+.||+.+++
T Consensus 358 ~~~l~~~~~~~g~~~~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 358 KNTLQLHDLATGALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp EEEEEEEETTTCCEEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred EEEEEEEECCCCCEEEecCCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 5 555675 3456777777778887776 66655533 3 34789999998766
No 264
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=99.43 E-value=2.6e-14 Score=137.76 Aligned_cols=120 Identities=22% Similarity=0.258 Sum_probs=67.3
Q ss_pred hhcc--cccccccccchh-hhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cc
Q 008820 14 AKVG--CVGSRICDKEVG-LFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QF 89 (552)
Q Consensus 14 ~~~~--~~~~~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf 89 (552)
.|+. |+++.+...... .......||+.|||||++ .+ ..++.++|||||||+||||+||+ ||
T Consensus 155 ~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~------~~---------~~~~~~~Di~slG~~l~~ll~g~~pf 219 (311)
T 3ork_A 155 VKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQA------RG---------DSVDARSDVYSLGCVLYEVLTGEPPF 219 (311)
T ss_dssp EEECCCSCC------------------CCTTCCHHHH------HT---------CCCCHHHHHHHHHHHHHHHHHSSCSC
T ss_pred EEEeeccCcccccccccccccccccCcCcccCCHHHh------cC---------CCCCchHhHHHHHHHHHHHHhCCCCC
Confidence 4555 555555443221 234567899999999999 22 45678999999999999999999 99
Q ss_pred hHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhh-HHHHHHhh
Q 008820 90 TKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTN-VWKCIREL 165 (552)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~-~~~~l~~~ 165 (552)
.......+. .+.... ....+.........++.+++.+||+.+|.+||+..+ +.+.+.+.
T Consensus 220 ~~~~~~~~~----------------~~~~~~-~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~ 279 (311)
T 3ork_A 220 TGDSPVSVA----------------YQHVRE-DPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRV 279 (311)
T ss_dssp CCSSHHHHH----------------HHHHHC-CCCCHHHHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred CCCChHHHH----------------HHHhcC-CCCCcccccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHH
Confidence 664433111 000000 000011111223445999999999999999998654 44444443
No 265
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.43 E-value=2.5e-14 Score=151.90 Aligned_cols=105 Identities=17% Similarity=0.157 Sum_probs=72.9
Q ss_pred hhhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cc
Q 008820 13 VAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QF 89 (552)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf 89 (552)
-.|+. |+|+....... ....+.|||.|||||++ . ...++.++|||||||+||||++|+ ||
T Consensus 480 ~ikL~DFGla~~~~~~~~--~~~~~~GT~~Y~APE~l------~---------~~~~~~~~DvwSlGvilyelltG~~Pf 542 (674)
T 3pfq_A 480 HIKIADFGMCKENIWDGV--TTKTFCGTPDYIAPEII------A---------YQPYGKSVDWWAFGVLLYEMLAGQAPF 542 (674)
T ss_dssp CEEECCCTTCEECCCTTC--CBCCCCSCSSSCCHHHH------T---------CCCBSTHHHHHHHHHHHHHHHHSSCSS
T ss_pred cEEEeecceeeccccCCc--ccccccCCCcccCHhhh------c---------CCCCCccceEechHHHHHHHHcCCCCC
Confidence 35666 66765333322 26778999999999999 3 356789999999999999999999 99
Q ss_pred hHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcch
Q 008820 90 TKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLL 155 (552)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~ 155 (552)
.+.+...+ ...+.............++.+++.+||+++|.+|++.
T Consensus 543 ~~~~~~~~---------------------~~~i~~~~~~~p~~~s~~~~~li~~lL~~dP~~R~~~ 587 (674)
T 3pfq_A 543 EGEDEDEL---------------------FQSIMEHNVAYPKSMSKEAVAICKGLMTKHPGKRLGC 587 (674)
T ss_dssp CCSSHHHH---------------------HHHHHSSCCCCCTTSCHHHHHHHHHHSCSSSTTCTTC
T ss_pred CCCCHHHH---------------------HHHHHhCCCCCCccCCHHHHHHHHHHccCCHHHCCCC
Confidence 76543321 1111111111112234569999999999999999997
No 266
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=99.43 E-value=1.7e-14 Score=136.17 Aligned_cols=114 Identities=21% Similarity=0.246 Sum_probs=69.2
Q ss_pred hhhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cc
Q 008820 13 VAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QF 89 (552)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf 89 (552)
..|+. |+++.+.... .....||+.|+|||++. ...+++++|||||||++|+|++|+ ||
T Consensus 154 ~~kl~Dfg~~~~~~~~~----~~~~~~~~~y~aPE~~~---------------~~~~~~~~Di~slG~~l~~l~~g~~p~ 214 (271)
T 3dtc_A 154 ILKITDFGLAREWHRTT----KMSAAGAYAWMAPEVIR---------------ASMFSKGSDVWSYGVLLWELLTGEVPF 214 (271)
T ss_dssp CEEECCCCC-----------------CCGGGSCHHHHH---------------HCCCSHHHHHHHHHHHHHHHHHCCCTT
T ss_pred ceEEccCCccccccccc----ccCCCCccceeCHHHhc---------------cCCCCchhhHHHHHHHHHHHHhCCCCC
Confidence 34555 4455444432 34568999999999982 244678999999999999999999 99
Q ss_pred hHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHHh
Q 008820 90 TKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRE 164 (552)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~~ 164 (552)
......... ..... ..............+.+++.+||+.+|.+||++.++.+.+..
T Consensus 215 ~~~~~~~~~-----------------~~~~~--~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~ 270 (271)
T 3dtc_A 215 RGIDGLAVA-----------------YGVAM--NKLALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTT 270 (271)
T ss_dssp TTSCHHHHH-----------------HHHHT--SCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC
T ss_pred CCCCHHHHH-----------------Hhhhc--CCCCCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhc
Confidence 663322110 00000 000001111233458999999999999999999999887764
No 267
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=99.43 E-value=9.5e-15 Score=149.98 Aligned_cols=112 Identities=17% Similarity=0.164 Sum_probs=74.9
Q ss_pred hhhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cc
Q 008820 13 VAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QF 89 (552)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf 89 (552)
..|+. |+|+.+..... .....|||.|||||++ . +.+++++|||||||+||+|++|+ ||
T Consensus 167 ~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~------~----------~~~~~~~DiwslG~il~~ll~g~~pf 227 (484)
T 3nyv_A 167 NIRIIDFGLSTHFEASKK---MKDKIGTAYYIAPEVL------H----------GTYDEKCDVWSTGVILYILLSGCPPF 227 (484)
T ss_dssp CEEECCTTHHHHBCCCCS---HHHHTTGGGTCCHHHH------H----------TCCCTHHHHHHHHHHHHHHHHSSCSS
T ss_pred cEEEEeeeeeEEcccccc---cccCCCCccccCceee------c----------CCCCCcceeHHHHHHHHHHHHCCCCC
Confidence 34555 55665554432 5667899999999998 2 34678999999999999999999 99
Q ss_pred hHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 90 TKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
.......+. ..+.......+.+.+.....++.+++.+||+.+|.+||++.++.+
T Consensus 228 ~~~~~~~~~-----------------~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~ 281 (484)
T 3nyv_A 228 NGANEYDIL-----------------KKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALD 281 (484)
T ss_dssp CCSSHHHHH-----------------HHHHHCCCCCCSGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred CCCCHHHHH-----------------HHHHcCCCCCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhh
Confidence 664433110 000000000011112223446899999999999999999887665
No 268
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=99.43 E-value=4.1e-14 Score=140.90 Aligned_cols=48 Identities=31% Similarity=0.676 Sum_probs=38.1
Q ss_pred hhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHH
Q 008820 31 FLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKE 92 (552)
Q Consensus 31 ~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~ 92 (552)
..+..+||+.|||||++ .| ...++.++|||||||+||||++|+ ||.+.
T Consensus 186 ~~~~~~gt~~y~aPE~~------~~--------~~~~~~~~DiwSlG~il~ell~g~~pf~~~ 234 (388)
T 3oz6_A 186 ILTDYVATRWYRAPEIL------LG--------STKYTKGIDMWSLGCILGEILCGKPIFPGS 234 (388)
T ss_dssp ----CCCGGGGCCHHHH------TT--------CCCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred cccCCcccCCcCCHHHh------cC--------CCCCCChhhHHHHHHHHHHHHhCCCCCCCC
Confidence 46778999999999999 22 245678999999999999999999 99553
No 269
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=99.43 E-value=2.8e-14 Score=137.68 Aligned_cols=119 Identities=16% Similarity=0.257 Sum_probs=81.5
Q ss_pred hhhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhh-CC-C
Q 008820 13 VAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE-Q 88 (552)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~llt-g~-p 88 (552)
..|+. |+++.+.............||+.|||||++. ...+++++|||||||+||||+| |+ |
T Consensus 183 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~---------------~~~~~~~~Di~slG~il~ellt~g~~p 247 (313)
T 1t46_A 183 ITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIF---------------NCVYTFESDVWSYGIFLWELFSLGSSP 247 (313)
T ss_dssp EEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHH---------------HCCCCHHHHHHHHHHHHHHHHTTTCCS
T ss_pred CEEEccccccccccccccceeccCCCCcceeeChHHhc---------------CCCCChHHHHHHHHHHHHHHHhCCCCC
Confidence 34555 5566665554433456778899999999982 2456789999999999999999 99 9
Q ss_pred chHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHH-hhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHHhhh
Q 008820 89 FTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLL-ENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELI 166 (552)
Q Consensus 89 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~~~~ 166 (552)
|....... .......... ..........+.+++.+||+.+|.+||++.++.+.+.+++
T Consensus 248 ~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~ 306 (313)
T 1t46_A 248 YPGMPVDS--------------------KFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQI 306 (313)
T ss_dssp STTCCSSH--------------------HHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCcccchh--------------------HHHHHhccCCCCCCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHH
Confidence 97633220 0000000000 0111223446999999999999999999999999988876
No 270
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=99.43 E-value=2.8e-14 Score=137.33 Aligned_cols=121 Identities=13% Similarity=0.213 Sum_probs=70.4
Q ss_pred hhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cch
Q 008820 14 AKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFT 90 (552)
Q Consensus 14 ~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~ 90 (552)
+|+. |+++....... .......||+.|+|||++ . ...+++++|||||||+||||++|+ ||.
T Consensus 173 ~kl~Dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~------~---------~~~~~~~~Di~slG~il~~l~~g~~pf~ 236 (309)
T 2h34_A 173 AYLVDFGIASATTDEKL-TQLGNTVGTLYYMAPERF------S---------ESHATYRADIYALTCVLYECLTGSPPYQ 236 (309)
T ss_dssp EEECSCCC-----------------CCGGGCCGGGT------C---------C----CCCHHHHHHHHHHHHHHSSCSSC
T ss_pred EEEecCccCcccccccc-ccccccCCCcCccCHHHH------c---------CCCCCchHhHHHHHHHHHHHHHCCCCCC
Confidence 4555 44444443322 124567899999999998 2 355678999999999999999999 997
Q ss_pred HHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCc-chhhHHHHHHhhhcC
Q 008820 91 KELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRP-LLTNVWKCIRELIIK 168 (552)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~-~~~~~~~~l~~~~~~ 168 (552)
......+.. .... ....+..........+.+++.+||+.+|.+|| ++.++.+.+...+..
T Consensus 237 ~~~~~~~~~-----------------~~~~-~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~ 297 (309)
T 2h34_A 237 GDQLSVMGA-----------------HINQ-AIPRPSTVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALAT 297 (309)
T ss_dssp SCHHHHHHH-----------------HHHS-CCCCGGGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC-
T ss_pred CchHHHHHH-----------------Hhcc-CCCCccccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHh
Confidence 654331110 0000 00001111223445699999999999999999 788999988876533
No 271
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=99.43 E-value=2.9e-14 Score=134.82 Aligned_cols=109 Identities=20% Similarity=0.278 Sum_probs=62.9
Q ss_pred hhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cch
Q 008820 14 AKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFT 90 (552)
Q Consensus 14 ~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~ 90 (552)
+|+. |+++.+.... ......||+.|+|||++ .+ ....++++|||||||++|+|++|+ ||.
T Consensus 151 ~kl~Dfg~~~~~~~~~---~~~~~~~t~~y~aPE~~------~~--------~~~~~~~~Di~slG~il~~l~~g~~pf~ 213 (275)
T 2eue_A 151 VKIADFGLSNIMTDGN---FLKTSCGSPNYAAPEVI------SG--------KLYAGPEVDVWSCGVILYVMLCRRLPFD 213 (275)
T ss_dssp EEECCSSCC------------------CTTCCHHHH------CC-------------THHHHHHHHHHHHHHHHSSCSSC
T ss_pred EEEeecccceeccCcc---cccCCCCCcCcCCceee------eC--------CCCCCcccchHHHHHHHHHHHhCCCCCC
Confidence 4555 4555544433 25667899999999998 22 122368999999999999999999 997
Q ss_pred HHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 91 KELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
......+ ..................+.+++.+||+.+|.+||++.++.+
T Consensus 214 ~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~ 262 (275)
T 2eue_A 214 DESIPVL---------------------FKNISNGVYTLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp CSSHHHH---------------------HHHHHHTCCCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred CCCHHHH---------------------HHHHHhCCCCCCccCCHHHHHHHHHHhhcCHhHCCCHHHHhh
Confidence 6443311 111111111111223445899999999999999999887654
No 272
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=99.43 E-value=2.1e-14 Score=136.52 Aligned_cols=109 Identities=22% Similarity=0.317 Sum_probs=68.5
Q ss_pred hhhhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-C
Q 008820 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (552)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-p 88 (552)
...|+. |+++.+..... .....||+.|||||++ ...+++++|||||||+||||++|+ |
T Consensus 164 ~~~kl~Dfg~a~~~~~~~~---~~~~~~t~~y~aPE~~----------------~~~~~~~~Di~slG~il~~ll~g~~p 224 (285)
T 3is5_A 164 SPIKIIDFGLAELFKSDEH---STNAAGTALYMAPEVF----------------KRDVTFKCDIWSAGVVMYFLLTGCLP 224 (285)
T ss_dssp CCEEECCCCCCCC-------------CTTGGGCCHHHH----------------TTCCCHHHHHHHHHHHHHHHHHSSCS
T ss_pred CCEEEEeeecceecCCccc---CcCcccccCcCChHHh----------------ccCCCcccCeehHHHHHHHHHhCCCC
Confidence 345666 55655544432 5677899999999998 234678999999999999999999 9
Q ss_pred chHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHH---hhhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 89 FTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLL---ENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 89 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
|.......+. ....... ..........+.+++.+||+.+|.+||++.++.+
T Consensus 225 f~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 278 (285)
T 3is5_A 225 FTGTSLEEVQ---------------------QKATYKEPNYAVECRPLTPQAVDLLKQMLTKDPERRPSAAQVLH 278 (285)
T ss_dssp SCCSSHHHHH---------------------HHHHHCCCCCCC--CCCCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred CCCCCHHHHH---------------------hhhccCCcccccccCcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 9764433110 0000000 0001112345889999999999999999888654
No 273
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=99.42 E-value=2.2e-14 Score=147.88 Aligned_cols=111 Identities=21% Similarity=0.187 Sum_probs=75.6
Q ss_pred hhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cch
Q 008820 14 AKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFT 90 (552)
Q Consensus 14 ~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~ 90 (552)
.|+. |+++.+..... .....|||.|||||++ ...+++++|||||||+||+|++|+ ||.
T Consensus 188 ~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~----------------~~~~~~~~DiwslG~il~~ll~g~~pf~ 248 (504)
T 3q5i_A 188 IKIVDFGLSSFFSKDYK---LRDRLGTAYYIAPEVL----------------KKKYNEKCDVWSCGVIMYILLCGYPPFG 248 (504)
T ss_dssp EEECCCTTCEECCTTSC---BCCCCSCTTTCCHHHH----------------TTCBCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred EEEEECCCCEEcCCCCc---cccccCCcCCCCHHHh----------------ccCCCchHHHHHHHHHHHHHHhCCCCCC
Confidence 4565 56665554432 5677899999999998 235678999999999999999999 997
Q ss_pred HHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 91 KELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
+.....+. ..+.......+...+.....++.+++.+||+.+|.+||++.++.+
T Consensus 249 ~~~~~~~~-----------------~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~ 301 (504)
T 3q5i_A 249 GQNDQDII-----------------KKVEKGKYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALN 301 (504)
T ss_dssp CSSHHHHH-----------------HHHHHCCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CCCHHHHH-----------------HHHHcCCCCCCccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 64433211 000000000011122234456999999999999999999887655
No 274
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.42 E-value=1.7e-10 Score=111.82 Aligned_cols=203 Identities=8% Similarity=0.050 Sum_probs=142.8
Q ss_pred cCccceEEEEEc--CCEEEEEeCCCcEEEEeCCCCe-EEEEE---------eCCCCCeEEEEEecCCCCEEEEEc-CCCc
Q 008820 250 GHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFS-HVHTF---------KGHDHKVMAVVYVDEDQPLCISGD-SGGG 316 (552)
Q Consensus 250 ~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~~-~~~~~---------~~h~~~v~~v~~~~~~~~~l~s~~-~dg~ 316 (552)
++-.....++++ ++++++...++.|++||..... .+..+ .++-.....++++|+++.++++.+ .++.
T Consensus 88 ~~~~~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~ 167 (329)
T 3fvz_A 88 NLFYLPHGLSIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSR 167 (329)
T ss_dssp TTCSSEEEEEECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCE
T ss_pred CccCCceEEEECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCe
Confidence 455678999998 7888888889999999976442 45555 244557899999996666777776 6999
Q ss_pred EEEEeCCCCCCCccccccccC-----CCceeeeEEEEeeC-CCEEEEeeCCCcEEEEECCCCceeEEec--CCCCCeEEE
Q 008820 317 IFVWSFSFPLGHEPLKKWNEE-----KDWRYSGIHALTTS-GRYLYTGSGDRTIKAWSLLDGTLSCTMS--GHKSAVSTL 388 (552)
Q Consensus 317 i~vwd~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~-~~~l~sgs~dg~i~iwd~~~~~~~~~~~--~h~~~v~~l 388 (552)
|++||.+ +.....+...... .......-.+++++ ++.+++...++.|++||..+++.+..+. .+...+.++
T Consensus 168 I~~~~~~-g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~ 246 (329)
T 3fvz_A 168 IVQFSPS-GKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAI 246 (329)
T ss_dssp EEEECTT-SCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEE
T ss_pred EEEEcCC-CCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCccee
Confidence 9999943 2221111111000 00111223477787 6677777888999999998899988873 456778888
Q ss_pred EEeCCEEEEEe--------CCCcEEEEECCCCceeEEEec--CCCCceEEEEEEcCCCCEEEEEECCCcEEEEeCC
Q 008820 389 AVCNGVLYSGS--------RDGTIRLWSLSDHSLLTVLEE--DSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRND 454 (552)
Q Consensus 389 ~~~~~~l~s~~--------~dg~i~iwd~~~~~~~~~~~~--~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~ 454 (552)
+++++.++... .+.+|++||..+++.+..+.. .+...... ++++++|.++++...++.|++|+..
T Consensus 247 ~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~-ia~~~dG~lyvad~~~~~I~~~~~~ 321 (329)
T 3fvz_A 247 SYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHD-IVASEDGTVYIGDAHTNTVWKFTLT 321 (329)
T ss_dssp EEETTEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEE-EEECTTSEEEEEESSSCCEEEEEEE
T ss_pred eecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeE-EEECCCCCEEEEECCCCEEEEEeCC
Confidence 88876443332 345899999999999888742 22233344 6899999888888889999999854
No 275
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=99.42 E-value=1e-13 Score=138.04 Aligned_cols=119 Identities=17% Similarity=0.182 Sum_probs=76.9
Q ss_pred hhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cch
Q 008820 14 AKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFT 90 (552)
Q Consensus 14 ~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~ 90 (552)
.|++ |+|+.+..... ......+|||.|||||++.... ....++.++|||||||+||||+||+ ||.
T Consensus 207 ikL~DFG~a~~~~~~~~-~~~~~~~gt~~Y~APE~l~~~~-----------~~~~~~~~~DiwSlGvilyell~G~~Pf~ 274 (410)
T 3v8s_A 207 LKLADFGTCMKMNKEGM-VRCDTAVGTPDYISPEVLKSQG-----------GDGYYGRECDWWSVGVFLYEMLVGDTPFY 274 (410)
T ss_dssp EEECCCTTCEECCTTSE-EECCSCCSCGGGCCHHHHHTTT-----------TTCEEETHHHHHHHHHHHHHHHHSSCTTC
T ss_pred EEEeccceeEeeccCCc-ccccCCcCCccccCHHHhhccC-----------CCcCCCCcceEecchHHHHHHHhCCCCCC
Confidence 5565 66766554432 1245789999999999993211 1123678999999999999999999 997
Q ss_pred HHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCC--CcchhhHHHH
Q 008820 91 KELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGC--RPLLTNVWKC 161 (552)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~--R~~~~~~~~~ 161 (552)
+.+...+ ...+.........+.......++.+++.+||+.+|.+ ||++.++.+.
T Consensus 275 ~~~~~~~-----------------~~~i~~~~~~~~~p~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~H 330 (410)
T 3v8s_A 275 ADSLVGT-----------------YSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRH 330 (410)
T ss_dssp CSSHHHH-----------------HHHHHTHHHHCCCCTTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTS
T ss_pred CCChhhH-----------------HHHHHhccccccCCCcccccHHHHHHHHHHccChhhhCCCCCHHHHhcC
Confidence 6544311 1111111111111112234556999999999988888 8888776653
No 276
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=99.42 E-value=4.2e-14 Score=133.24 Aligned_cols=117 Identities=17% Similarity=0.200 Sum_probs=79.9
Q ss_pred hhhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhh-CC-C
Q 008820 13 VAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE-Q 88 (552)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~llt-g~-p 88 (552)
.+|+. |+++.+..... .......||+.|||||++. ...+++++|||||||++|+|++ |+ |
T Consensus 144 ~~kl~Dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~---------------~~~~~~~~Di~slG~~l~~ll~~g~~p 207 (269)
T 4hcu_A 144 VIKVSDFGMTRFVLDDQY-TSSTGTKFPVKWASPEVFS---------------FSRYSSKSDVWSFGVLMWEVFSEGKIP 207 (269)
T ss_dssp CEEECCTTGGGGBCCHHH-HSTTSTTCCGGGCCHHHHH---------------HCCCCHHHHHHHHHHHHHHHHTTSCCT
T ss_pred CEEecccccccccccccc-ccccCcccccccCCHHHhc---------------CCCCCchhhhHHHHHHHHHHhcCCCCC
Confidence 35555 45555544332 2355677889999999992 2456789999999999999999 89 9
Q ss_pred chHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHH-HhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHHhhh
Q 008820 89 FTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYL-LENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELI 166 (552)
Q Consensus 89 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~~~~ 166 (552)
|.......+. ...... ...........+.+++.+||+.+|.+||++.++.+.+.++.
T Consensus 208 ~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~ 265 (269)
T 4hcu_A 208 YENRSNSEVV---------------------EDISTGFRLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIA 265 (269)
T ss_dssp TTTCCHHHHH---------------------HHHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCCCHHHHH---------------------HHHhcCccCCCCCcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHH
Confidence 9764433110 111000 00111123445889999999999999999999999988765
No 277
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=99.42 E-value=4e-14 Score=143.83 Aligned_cols=61 Identities=18% Similarity=0.399 Sum_probs=42.5
Q ss_pred hhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cch
Q 008820 14 AKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFT 90 (552)
Q Consensus 14 ~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~ 90 (552)
.|+. |+|+...... ..+...||+.|||||++ .| ..++.++|||||||+||||++|+ ||.
T Consensus 203 ~kl~DFG~a~~~~~~~---~~~~~~gt~~y~aPE~~------~~---------~~~~~~~DiwSlG~il~ell~g~~pF~ 264 (464)
T 3ttj_A 203 LKILDFGLARTAGTSF---MMTPYVVTRYYRAPEVI------LG---------MGYKENVDIWSVGCIMGEMVRHKILFP 264 (464)
T ss_dssp EEECCCCCC-----CC---CC----CCCTTCCHHHH------TT---------CCCCTTHHHHHHHHHHHHHHHSSCSSC
T ss_pred EEEEEEEeeeecCCCc---ccCCCcccccccCHHHH------cC---------CCCCHHHHHHHHHHHHHHHHhCCCCCC
Confidence 4555 6666555432 36778999999999999 33 56778999999999999999999 996
Q ss_pred HH
Q 008820 91 KE 92 (552)
Q Consensus 91 ~~ 92 (552)
+.
T Consensus 265 g~ 266 (464)
T 3ttj_A 265 GR 266 (464)
T ss_dssp CS
T ss_pred CC
Confidence 54
No 278
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=99.42 E-value=4.8e-14 Score=136.56 Aligned_cols=133 Identities=14% Similarity=0.134 Sum_probs=78.7
Q ss_pred hhhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cc
Q 008820 13 VAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QF 89 (552)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf 89 (552)
.+|+. |+++...............||+.|||||++. ...+++++|||||||+||||+||+ ||
T Consensus 177 ~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---------------~~~~~~~~Di~slG~il~ell~g~~p~ 241 (321)
T 2qkw_B 177 VPKITDFGISKKGTELDQTHLSTVVKGTLGYIDPEYFI---------------KGRLTEKSDVYSFGVVLFEVLCARSAI 241 (321)
T ss_dssp CEEECCCTTCEECSSSSCCCCBCCCEEETTTCCHHHHH---------------HCBCCTHHHHHHHHHHHHHHHHCCTTC
T ss_pred CEEEeecccccccccccccccccccCCCccccCHHHhc---------------CCCCCcccchHhHHHHHHHHHhCCCcc
Confidence 34555 4555444333323345678999999999982 245678999999999999999999 99
Q ss_pred hHHHhhhhhhccccCCCchhhhhhhhHH-HHHHH-HHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHHhhh
Q 008820 90 TKELIDYIRCVSTKASDDNIACLGMYMA-WMEKV-TYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELI 166 (552)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~~~~ 166 (552)
.......+. ....|........ ..... +.............+.+++.+||+.+|.+||++.++.+.+..++
T Consensus 242 ~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l 314 (321)
T 2qkw_B 242 VQSLPREMV------NLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYAL 314 (321)
T ss_dssp SCSSSSSCC------CHHHHTHHHHTTTCCCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred cccCcHHHH------HHHHHhhhccccccHHHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHh
Confidence 654322110 0000000000000 00000 00000000001223889999999999999999999999888775
No 279
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=99.42 E-value=4.6e-14 Score=138.59 Aligned_cols=111 Identities=14% Similarity=0.145 Sum_probs=69.9
Q ss_pred hhhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cc
Q 008820 13 VAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QF 89 (552)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf 89 (552)
.+|+. |+++.+...... ....+.||+.|||||++ .| ....++.++|||||||+||||+||+ ||
T Consensus 197 ~~kl~DfG~a~~~~~~~~~-~~~~~~gt~~y~aPE~~------~~-------~~~~~~~~~DvwslG~il~ell~g~~pf 262 (355)
T 1vzo_A 197 HVVLTDFGLSKEFVADETE-RAYDFCGTIEYMAPDIV------RG-------GDSGHDKAVDWWSLGVLMYELLTGASPF 262 (355)
T ss_dssp CEEESCSSEEEECCGGGGG-GGCGGGSCCTTCCHHHH------TT-------CC---CTHHHHHHHHHHHHHHHHSSCTT
T ss_pred cEEEeeCCCCeecccCCCC-cccCcccCcCccChhhh------cC-------CCCCCCchhhHHHHHHHHHHHHHCCCCC
Confidence 35565 556655443322 35567899999999999 32 1234678999999999999999999 99
Q ss_pred hHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcc
Q 008820 90 TKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPL 154 (552)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~ 154 (552)
....... ....+..................+.+++.+||+.+|.+||+
T Consensus 263 ~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~~ 310 (355)
T 1vzo_A 263 TVDGEKN-----------------SQAEISRRILKSEPPYPQEMSALAKDLIQRLLMKDPKKRLG 310 (355)
T ss_dssp SCTTSCC-----------------CHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSSGGGSTT
T ss_pred ccCCccc-----------------hHHHHHHHHhccCCCCCcccCHHHHHHHHHHhhhCHHHhcC
Confidence 6533220 00111111111111122223445889999999999999994
No 280
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=99.42 E-value=3.7e-14 Score=136.62 Aligned_cols=131 Identities=15% Similarity=0.189 Sum_probs=75.8
Q ss_pred hhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cch
Q 008820 14 AKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFT 90 (552)
Q Consensus 14 ~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~ 90 (552)
+|+. |+++.+...... .+...||+.|||||++ .| ...++.++|||||||+||+|++|+ ||.
T Consensus 158 ~kl~Dfg~a~~~~~~~~~--~~~~~~t~~y~aPE~~------~~--------~~~~~~~~DiwslG~il~~ll~g~~pf~ 221 (311)
T 3niz_A 158 LKLADFGLARAFGIPVRS--YTHEVVTLWYRAPDVL------MG--------SKKYSTSVDIWSIGCIFAEMITGKPLFP 221 (311)
T ss_dssp EEECCCTTCEETTSCCC-----CCCCCCTTCCHHHH------TT--------CCSCCTHHHHHHHHHHHHHHHHSSCSCC
T ss_pred EEEccCcCceecCCCccc--ccCCcccCCcCCHHHh------cC--------CCCCCchHHhHHHHHHHHHHHhCCCCCC
Confidence 4555 556555433222 5667899999999998 22 234678999999999999999999 995
Q ss_pred HHHhh----hhhhccccCCCchhhhhhhhHHHHHHHHH-----HHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 91 KELID----YIRCVSTKASDDNIACLGMYMAWMEKVTY-----LLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 91 ~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
..... .+........+..|........+...... ...........++.+++.+||+.+|.+||++.++.+
T Consensus 222 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 300 (311)
T 3niz_A 222 GVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN 300 (311)
T ss_dssp CSSTTTHHHHHHHHHCCCCTTTSGGGTTSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred CCChHHHHHHHHHHHCCCChHHhhhhhccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 43222 11111222233333221111111100000 000011123345889999999999999999887655
No 281
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=99.42 E-value=6.1e-14 Score=139.21 Aligned_cols=118 Identities=16% Similarity=0.207 Sum_probs=83.0
Q ss_pred hhhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhh-CC-C
Q 008820 13 VAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE-Q 88 (552)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~llt-g~-p 88 (552)
.+|+. |+++.+.............||+.|||||++ . ...++.++|||||||+||||+| |+ |
T Consensus 229 ~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~------~---------~~~~~~~~DiwslG~il~ellt~g~~p 293 (382)
T 3tt0_A 229 VMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEAL------F---------DRIYTHQSDVWSFGVLLWEIFTLGGSP 293 (382)
T ss_dssp CEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHH------H---------SCCCCHHHHHHHHHHHHHHHHTTSCCS
T ss_pred cEEEcccCcccccccccccccccCCCCCcceeCHHHh------c---------CCCCCchhHHHHHHHHHHHHHhCCCCC
Confidence 45666 666666554433345667889999999999 2 2456789999999999999999 99 9
Q ss_pred chHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHH-HhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHHhhh
Q 008820 89 FTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYL-LENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELI 166 (552)
Q Consensus 89 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~~~~ 166 (552)
|.......+. ..+... ..........++.+++.+||+.+|.+||++.++.+.+.++.
T Consensus 294 ~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~ 351 (382)
T 3tt0_A 294 YPGVPVEELF---------------------KLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIV 351 (382)
T ss_dssp STTCCHHHHH---------------------HHHHTTCCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCCCHHHHH---------------------HHHHcCCCCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 9764433111 100000 00111223445999999999999999999999999988875
No 282
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=99.42 E-value=3e-14 Score=139.46 Aligned_cols=120 Identities=18% Similarity=0.220 Sum_probs=81.5
Q ss_pred hhhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhh-CC-C
Q 008820 13 VAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE-Q 88 (552)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~llt-g~-p 88 (552)
.+|+. |+++.+.............||+.|||||++. ...+++++|||||||+||||+| |+ |
T Consensus 210 ~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~---------------~~~~~~~~Di~slG~il~el~t~g~~p 274 (344)
T 1rjb_A 210 VVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLF---------------EGIYTIKSDVWSYGILLWEIFSLGVNP 274 (344)
T ss_dssp EEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHH---------------HCCCCHHHHHHHHHHHHHHHTTTSCCS
T ss_pred cEEeCCCccCcccccCccceeccCccCccCccCHHHhc---------------cCCCChhHhHHHHHHHHHHHHcCCCCC
Confidence 35555 5566555544333456788999999999982 2456789999999999999998 99 9
Q ss_pred chHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHHhhh
Q 008820 89 FTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELI 166 (552)
Q Consensus 89 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~~~~ 166 (552)
|......... ....... ...........++.+++.+||+.+|.+||++.++.+.+..++
T Consensus 275 ~~~~~~~~~~----------------~~~~~~~---~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~ 333 (344)
T 1rjb_A 275 YPGIPVDANF----------------YKLIQNG---FKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQL 333 (344)
T ss_dssp STTCCCSHHH----------------HHHHHTT---CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC
T ss_pred cccCCcHHHH----------------HHHHhcC---CCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHH
Confidence 9664322000 0000000 000111123445999999999999999999999999988765
No 283
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=99.42 E-value=3.3e-14 Score=137.92 Aligned_cols=123 Identities=14% Similarity=0.097 Sum_probs=73.8
Q ss_pred hhhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhh-CC-C
Q 008820 13 VAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE-Q 88 (552)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~llt-g~-p 88 (552)
.+|+. |+++.+.............||+.|+|||++. ...++.++|||||||++|||++ |+ |
T Consensus 175 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~---------------~~~~~~~~Di~slG~il~ell~~g~~p 239 (323)
T 3qup_A 175 TVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLA---------------DNLYTVHSDVWAFGVTMWEIMTRGQTP 239 (323)
T ss_dssp CEEECCCCC-----------------CCGGGCCHHHHH---------------HCCCCHHHHHHHHHHHHHHHHTTSCCT
T ss_pred CEEEeeccccccccccccccccccccCcccccCchhhc---------------CCCCCCccchhhHHHHHHHHHhCCCCC
Confidence 34555 5566655544333355677899999999982 2456789999999999999999 89 9
Q ss_pred chHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHH-HhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHHhhhc
Q 008820 89 FTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYL-LENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELII 167 (552)
Q Consensus 89 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~~~~~ 167 (552)
|.......+. ...... ..........++.+++.+||+.+|.+||++.++.+.+.+++.
T Consensus 240 ~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~ 298 (323)
T 3qup_A 240 YAGIENAEIY---------------------NYLIGGNRLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILG 298 (323)
T ss_dssp TTTCCGGGHH---------------------HHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ccccChHHHH---------------------HHHhcCCCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 9764433110 000000 011112234458999999999999999999999999998875
Q ss_pred Cccc
Q 008820 168 KPEF 171 (552)
Q Consensus 168 ~~~~ 171 (552)
.+..
T Consensus 299 ~~~~ 302 (323)
T 3qup_A 299 HLSV 302 (323)
T ss_dssp C---
T ss_pred Hhhh
Confidence 4433
No 284
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=99.42 E-value=3.8e-14 Score=138.11 Aligned_cols=119 Identities=17% Similarity=0.287 Sum_probs=80.5
Q ss_pred hhhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhh-CC-C
Q 008820 13 VAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE-Q 88 (552)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~llt-g~-p 88 (552)
..|+. |+++.+.............||+.|||||++. ...++.++|||||||+||||+| |. |
T Consensus 202 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~---------------~~~~~~~~Di~slG~il~el~t~g~~p 266 (333)
T 2i1m_A 202 VAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIF---------------DCVYTVQSDVWSYGILLWEIFSLGLNP 266 (333)
T ss_dssp EEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHH---------------HCCCCHHHHHHHHHHHHHHHTTTSCCS
T ss_pred eEEECccccccccccccceeecCCCCCCccccCHHHhc---------------cCCCChHHHHHHHHHHHHHHHcCCCCC
Confidence 34555 5566555444333456678899999999982 2456789999999999999999 88 9
Q ss_pred chHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHH-HhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHHhhh
Q 008820 89 FTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYL-LENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELI 166 (552)
Q Consensus 89 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~~~~ 166 (552)
|........ ........ ...........+.+++.+||+.+|.+||++.++.+.+..+.
T Consensus 267 ~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~ 325 (333)
T 2i1m_A 267 YPGILVNSK--------------------FYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQA 325 (333)
T ss_dssp STTCCSSHH--------------------HHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CcccchhHH--------------------HHHHHhcCCCCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHH
Confidence 976332200 00000000 00111123445899999999999999999999999887764
No 285
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=99.42 E-value=1.3e-14 Score=145.66 Aligned_cols=117 Identities=14% Similarity=0.219 Sum_probs=68.0
Q ss_pred hhhhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-C
Q 008820 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (552)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-p 88 (552)
..+|+. |+++.+.... ....+.||+.|||||++... ....++.++|||||||+||+|+||+ |
T Consensus 279 ~~~kl~DFG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~------------~~~~~~~~~DiwslG~il~~lltg~~p 343 (419)
T 3i6u_A 279 CLIKITDFGHSKILGETS---LMRTLCGTPTYLAPEVLVSV------------GTAGYNRAVDCWSLGVILFICLSGYPP 343 (419)
T ss_dssp CCEEECCSSTTTSCC--------------CTTCCTTTTC----------------CTTHHHHHHHHHHHHHHHHHHSSCS
T ss_pred ceEEEeecccceecCCCc---cccccCCCCCccCceeeecC------------CCCCCCchhhhHhHHHHHHHHHHCCCC
Confidence 346676 6676665443 36778999999999998210 1245678999999999999999999 9
Q ss_pred chHHHhh-hhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 89 FTKELID-YIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 89 f~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
|...... .+. ..+.......+..........+.+++.+||+.+|.+||++.++.+
T Consensus 344 f~~~~~~~~~~-----------------~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 399 (419)
T 3i6u_A 344 FSEHRTQVSLK-----------------DQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR 399 (419)
T ss_dssp SCCCSSSCCHH-----------------HHHHTTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred CCCCcchHHHH-----------------HHHhcCCCCCCchhhcccCHHHHHHHHHHccCChhHCcCHHHHhC
Confidence 9653211 000 000000000001111223445889999999999999999887655
No 286
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=99.42 E-value=6.3e-14 Score=133.53 Aligned_cols=124 Identities=17% Similarity=0.210 Sum_probs=69.8
Q ss_pred hhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cch
Q 008820 14 AKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFT 90 (552)
Q Consensus 14 ~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~ 90 (552)
.|+. |+++...............||+.|||||++... ....++.++|||||||++|+|++|+ ||.
T Consensus 159 ~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~------------~~~~~~~~~Di~slG~il~el~~g~~p~~ 226 (289)
T 3og7_A 159 VKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQ------------DSNPYSFQSDVYAFGIVLYELMTGQLPYS 226 (289)
T ss_dssp EEECCCC------------------CCCTTCCHHHHC----------------CCSCHHHHHHHHHHHHHHHHHSSCTTS
T ss_pred EEEccceeccccccccccccccccCCCccccCchhhccc------------CCCCCCcccchHHHHHHHHHHHHCCCCcc
Confidence 4555 445544433323345677899999999998210 1245667999999999999999999 996
Q ss_pred HHHhh-hhhhccccCCCchhhhhhhhHHHHHHH-HHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHHhhh
Q 008820 91 KELID-YIRCVSTKASDDNIACLGMYMAWMEKV-TYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELI 166 (552)
Q Consensus 91 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~~~~ 166 (552)
..... .+. ....... ..............+.+++.+||+.+|.+||++.++.+.+.++.
T Consensus 227 ~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~ 287 (289)
T 3og7_A 227 NINNRDQII-----------------EMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELA 287 (289)
T ss_dssp SCCCHHHHH-----------------HHHHHTSCCCCTTSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred ccchHHHHH-----------------HHhcccccCcchhhccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHh
Confidence 53211 000 0000000 00000011123345899999999999999999999999888765
No 287
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=99.42 E-value=4.1e-14 Score=142.46 Aligned_cols=59 Identities=29% Similarity=0.500 Sum_probs=45.8
Q ss_pred hhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cch
Q 008820 14 AKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFT 90 (552)
Q Consensus 14 ~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~ 90 (552)
.|+. |+|+..... .....||+.|||||++ .| ..++.++|||||||+||||+||+ ||.
T Consensus 241 vkL~DFG~a~~~~~~-----~~~~~gt~~y~aPE~~------~~---------~~~~~~~DiwSlG~il~elltG~~pf~ 300 (429)
T 3kvw_A 241 IKVIDFGSSCYEHQR-----VYTYIQSRFYRAPEVI------LG---------ARYGMPIDMWSLGCILAELLTGYPLLP 300 (429)
T ss_dssp EEECCCTTCEETTCC-----CCSSCSCGGGCCHHHH------HT---------BCCCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred eEEeecccceecCCc-----ccccCCCCCccChHHH------hC---------CCCCchHHHHhHHHHHHHHHhCCCCCC
Confidence 4555 555444333 4567999999999999 22 45789999999999999999999 995
Q ss_pred HH
Q 008820 91 KE 92 (552)
Q Consensus 91 ~~ 92 (552)
+.
T Consensus 301 ~~ 302 (429)
T 3kvw_A 301 GE 302 (429)
T ss_dssp CS
T ss_pred CC
Confidence 53
No 288
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=99.41 E-value=2.2e-14 Score=136.25 Aligned_cols=112 Identities=19% Similarity=0.244 Sum_probs=69.9
Q ss_pred hhhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cc
Q 008820 13 VAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QF 89 (552)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf 89 (552)
..|+. |+++.+..... .....||+.|+|||++ . ...+++++|||||||+||+|++|+ ||
T Consensus 150 ~~kl~dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~------~---------~~~~~~~~Di~slG~il~~l~~g~~p~ 211 (283)
T 3bhy_A 150 RIKLIDFGIAHKIEAGNE---FKNIFGTPEFVAPEIV------N---------YEPLGLEADMWSIGVITYILLSGASPF 211 (283)
T ss_dssp CEEECCCTTCEECC-----------CCCGGGCCHHHH------T---------TCCCCTHHHHHHHHHHHHHHHHSSCTT
T ss_pred ceEEEecccceeccCCCc---ccccCCCcCccCccee------c---------CCCCCcchhhhhHHHHHHHHHHCCCCC
Confidence 34555 44555544332 4567899999999998 2 255678999999999999999999 99
Q ss_pred hHHHhhhh-hhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 90 TKELIDYI-RCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 90 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
.......+ ..+.... ...+..........+.+++.+||+.+|.+||++.++.+
T Consensus 212 ~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 265 (283)
T 3bhy_A 212 LGETKQETLTNISAVN------------------YDFDEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLE 265 (283)
T ss_dssp CCSSHHHHHHHHHTTC------------------CCCCHHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred CCcchHHHHHHhHhcc------------------cCCcchhcccCCHHHHHHHHHHccCCHhHCcCHHHHHh
Confidence 65432211 0000000 00001111223345889999999999999999887765
No 289
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=99.41 E-value=1.2e-13 Score=132.96 Aligned_cols=120 Identities=16% Similarity=0.263 Sum_probs=77.5
Q ss_pred hhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cch
Q 008820 14 AKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFT 90 (552)
Q Consensus 14 ~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~ 90 (552)
.|+. |+++...............||+.|||||++ . +.+++++|||||||+||+|++|+ ||.
T Consensus 172 ~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~------~----------~~~~~~~Dv~slG~il~~l~~g~~p~~ 235 (307)
T 2nru_A 172 AKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEAL------R----------GEITPKSDIYSFGVVLLEIITGLPAVD 235 (307)
T ss_dssp EEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHH------T----------TEECTHHHHHHHHHHHHHHHHCCCSBC
T ss_pred EEEeecccccccccccccccccccCCCcCcCChHHh------c----------CCCCccchhHHHHHHHHHHHHCCCCcc
Confidence 4444 445444433222235567899999999998 2 34678999999999999999999 997
Q ss_pred HHHhhhhhhccccCCCchhhhhhhhHHHHHHH-------HHHHhh----hhcCccccHHHHHHhhcccCCCCCcchhhHH
Q 008820 91 KELIDYIRCVSTKASDDNIACLGMYMAWMEKV-------TYLLEN----KFGSEFVSLQLMFCQCLNFDPGCRPLLTNVW 159 (552)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~----~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~ 159 (552)
......+. ..+.... ...... ........+.+++.+||+.+|.+||++.++.
T Consensus 236 ~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~ 298 (307)
T 2nru_A 236 EHREPQLL-----------------LDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQ 298 (307)
T ss_dssp TTBSSSBT-----------------THHHHHHHTTSCCHHHHSCSSCSCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHH
T ss_pred cCcchHHH-----------------HHHHHHhhhhhhhhhhhccccccccchHHHHHHHHHHHHHcCCCcccCcCHHHHH
Confidence 64332110 0000000 000000 0001122488999999999999999999999
Q ss_pred HHHHhhh
Q 008820 160 KCIRELI 166 (552)
Q Consensus 160 ~~l~~~~ 166 (552)
+.+.++.
T Consensus 299 ~~L~~l~ 305 (307)
T 2nru_A 299 QLLQEMT 305 (307)
T ss_dssp HHHHHHC
T ss_pred HHHHHHh
Confidence 9888753
No 290
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=99.41 E-value=3.4e-14 Score=146.30 Aligned_cols=107 Identities=15% Similarity=0.224 Sum_probs=73.3
Q ss_pred hhhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cc
Q 008820 13 VAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QF 89 (552)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf 89 (552)
..|++ |+++.+..... .....|||.|||||++ . ...++.++|||||||+||||++|+ ||
T Consensus 324 ~vKL~DFGla~~~~~~~~---~~~~~GT~~Y~APEvl------~---------~~~~~~~~DiwSLGvilyeLltG~~PF 385 (576)
T 2acx_A 324 HIRISDLGLAVHVPEGQT---IKGRVGTVGYMAPEVV------K---------NERYTFSPDWWALGCLLYEMIAGQSPF 385 (576)
T ss_dssp CEEECCCTTCEECCTTCC---EECCCSCGGGCCHHHH------T---------TCEESSHHHHHHHHHHHHHHHHSSCSS
T ss_pred CeEEEecccceecccCcc---ccccCCCccccCHHHH------c---------CCCCCccchHHHHHHHHHHHHhCCCCC
Confidence 35566 67766655432 4567999999999999 2 245778999999999999999999 99
Q ss_pred hHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcc
Q 008820 90 TKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPL 154 (552)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~ 154 (552)
....... ....+...+...+.........++.+++.+||+.+|.+||+
T Consensus 386 ~~~~~~~-----------------~~~~i~~~i~~~~~~~p~~~s~~~~dLI~~lL~~dP~~R~g 433 (576)
T 2acx_A 386 QQRKKKI-----------------KREEVERLVKEVPEEYSERFSPQARSLCSQLLCKDPAERLG 433 (576)
T ss_dssp SCSSSCC-----------------CHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSSGGGSTT
T ss_pred cccccch-----------------hHHHHHHHhhcccccCCccCCHHHHHHHHHhccCCHHHcCC
Confidence 7643210 01112222222222222334556999999999999999994
No 291
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=99.41 E-value=5.4e-14 Score=136.42 Aligned_cols=105 Identities=15% Similarity=0.157 Sum_probs=66.5
Q ss_pred hhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cch
Q 008820 14 AKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFT 90 (552)
Q Consensus 14 ~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~ 90 (552)
.|+. |+++....... ....+.||+.|||||++ . ...++.++|||||||+||||++|+ ||.
T Consensus 160 ~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~------~---------~~~~~~~~DiwslG~il~el~~g~~pf~ 222 (327)
T 3a62_A 160 VKLTDFGLCKESIHDGT--VTHTFCGTIEYMAPEIL------M---------RSGHNRAVDWWSLGALMYDMLTGAPPFT 222 (327)
T ss_dssp EEECCCSCC------------CTTSSCCTTSCHHHH------T---------TSCCCTHHHHHHHHHHHHHHHHSSCSCC
T ss_pred EEEEeCCcccccccCCc--cccccCCCcCccCHhhC------c---------CCCCCCcccchhHHHHHHHHHHCCCCCC
Confidence 4555 44544332221 35678899999999999 2 245678999999999999999999 997
Q ss_pred HHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchh
Q 008820 91 KELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLT 156 (552)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~ 156 (552)
......+ ...+.............++.+++.+||+.+|.+||+..
T Consensus 223 ~~~~~~~---------------------~~~i~~~~~~~p~~~~~~~~~li~~~L~~dp~~R~~~~ 267 (327)
T 3a62_A 223 GENRKKT---------------------IDKILKCKLNLPPYLTQEARDLLKKLLKRNAASRLGAG 267 (327)
T ss_dssp CSSHHHH---------------------HHHHHHTCCCCCTTSCHHHHHHHHHHSCSCGGGSTTSS
T ss_pred CCCHHHH---------------------HHHHHhCCCCCCCCCCHHHHHHHHHHHhcCHhhccCCC
Confidence 6443311 11111111111122344689999999999999999643
No 292
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=99.41 E-value=4.5e-14 Score=143.25 Aligned_cols=109 Identities=24% Similarity=0.364 Sum_probs=75.1
Q ss_pred hhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cch
Q 008820 14 AKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFT 90 (552)
Q Consensus 14 ~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~ 90 (552)
.|+. |+++.+.... ......|||.|+|||++ .| ....++++|||||||+||+|++|+ ||.
T Consensus 155 vkL~DFG~a~~~~~~~---~~~~~~gt~~y~aPE~~------~~--------~~~~~~~~DiwSlGvil~elltG~~Pf~ 217 (476)
T 2y94_A 155 AKIADFGLSNMMSDGE---FLRTSCGSPNYAAPEVI------SG--------RLYAGPEVDIWSSGVILYALLCGTLPFD 217 (476)
T ss_dssp EEECCCSSCEECCTTC---CBCCCCSCSTTCCHHHH------TT--------CCBCSHHHHHHHHHHHHHHHHHSSCSSC
T ss_pred eEEEeccchhhccccc---cccccCCCcCeEChhhc------cC--------CCCCCCcceehhhHHHHHHHhhCCCCCC
Confidence 4555 6666665543 35677899999999999 32 122367999999999999999999 997
Q ss_pred HHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 91 KELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
......+ ...+.............++.+++.+||+.+|.+||++.++.+
T Consensus 218 ~~~~~~~---------------------~~~i~~~~~~~p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~ 266 (476)
T 2y94_A 218 DDHVPTL---------------------FKKICDGIFYTPQYLNPSVISLLKHMLQVDPMKRATIKDIRE 266 (476)
T ss_dssp CSSSHHH---------------------HHHHHTTCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CCCHHHH---------------------HHHHhcCCcCCCccCCHHHHHHHHHHcCCCchhCcCHHHHHh
Confidence 6543311 111111011111223446899999999999999999988765
No 293
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.41 E-value=3.3e-10 Score=109.94 Aligned_cols=244 Identities=11% Similarity=0.074 Sum_probs=155.1
Q ss_pred EEEEeecCccceEEEEEc--CCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCC----CcE
Q 008820 244 KFKDLQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSG----GGI 317 (552)
Q Consensus 244 ~~~~l~~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~d----g~i 317 (552)
.+..+.++...+.+++|+ +++++++..++.|.+||.++++.......+...+.++++++++. ++++...+ +.|
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~-l~v~~~~~~~~~~~i 114 (333)
T 2dg1_A 36 PWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGR-LFVCYLGDFKSTGGI 114 (333)
T ss_dssp EEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSC-EEEEECTTSSSCCEE
T ss_pred eeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCc-EEEEeCCCCCCCceE
Confidence 345677788888999998 77777888899999999998877665556778899999998765 66666655 689
Q ss_pred EEEeCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeC------CCcEEEEECCCCceeEEecCCCCCeEEEEEe
Q 008820 318 FVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSG------DRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC 391 (552)
Q Consensus 318 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~------dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~ 391 (552)
.+||.++......+... ... ....-..++++++.+++... .+.|..+|..+++..... .+...+..++|+
T Consensus 115 ~~~d~~~~~~~~~~~~~--~~~-~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~i~~~ 190 (333)
T 2dg1_A 115 FAATENGDNLQDIIEDL--STA-YCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPII-QNISVANGIALS 190 (333)
T ss_dssp EEECTTSCSCEEEECSS--SSC-CCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEE-EEESSEEEEEEC
T ss_pred EEEeCCCCEEEEEEccC--ccC-CcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEee-cCCCcccceEEC
Confidence 99998765432111111 111 11223467778876666543 355667776555544322 233457889998
Q ss_pred -CC-EEE-EEeCCCcEEEEECCC-CceeEEE-----ecCCCCceEEEEEEcCCCCEEEEEECCCcEEEEeCC-cceeeee
Q 008820 392 -NG-VLY-SGSRDGTIRLWSLSD-HSLLTVL-----EEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRND-KFMKSMQ 461 (552)
Q Consensus 392 -~~-~l~-s~~~dg~i~iwd~~~-~~~~~~~-----~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~-~~~~~~~ 461 (552)
++ .++ +.+.++.|.+||+.+ +.....+ ...........++++++|+++++...++.|.+||.. +.+..+.
T Consensus 191 ~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~v~~~d~~g~~~~~~~ 270 (333)
T 2dg1_A 191 TDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNKRGYPIGQIL 270 (333)
T ss_dssp TTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEEEEECTTSCEEEEEE
T ss_pred CCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECCCCCEEEEEcCCCEEEEECCCCCEEEEEE
Confidence 43 454 445688999999964 3333221 111111233347899999988888788999999964 3344444
Q ss_pred cccc------eEEEEEe--cCCEEEEEeCCC------eEEEEecC
Q 008820 462 THKG------SVFAVFL--EGKWLFTGGWDK------TVSVQELA 492 (552)
Q Consensus 462 ~h~~------~v~~v~~--~~~~l~sgs~dg------~i~iwd~~ 492 (552)
.+.. .+.++.+ +++.|+.++.++ .|...++.
T Consensus 271 ~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~g~~~~~~~l~~~~~~ 315 (333)
T 2dg1_A 271 IPGRDEGHMLRSTHPQFIPGTNQLIICSNDIEMGGGSMLYTVNGF 315 (333)
T ss_dssp CTTGGGTCSCBCCEEEECTTSCEEEEEEECGGGTCCEEEEEEECS
T ss_pred cCCCccccccCcceEEECCCCCEEEEEeCccCCCCCceEEEEecc
Confidence 3332 4566665 666776665553 45555544
No 294
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=99.41 E-value=3.7e-14 Score=136.90 Aligned_cols=118 Identities=14% Similarity=0.231 Sum_probs=80.9
Q ss_pred hhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhh-CC-Cc
Q 008820 14 AKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE-QF 89 (552)
Q Consensus 14 ~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~llt-g~-pf 89 (552)
.|+. |+++.+.............||+.|||||++. ...+++++|||||||++|||+| |+ ||
T Consensus 189 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~---------------~~~~~~~~Di~slG~il~el~t~g~~p~ 253 (314)
T 2ivs_A 189 MKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLF---------------DHIYTTQSDVWSFGVLLWEIVTLGGNPY 253 (314)
T ss_dssp EEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHH---------------HCEECHHHHHHHHHHHHHHHHTTSCCSS
T ss_pred EEEccccccccccccccceeccCCCCcccccChhhhc---------------CCCcCchhhHHHHHHHHHHHHhCCCCCC
Confidence 4555 5565554443322345667899999999992 2456789999999999999999 99 99
Q ss_pred hHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHH-HhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHHhhhc
Q 008820 90 TKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYL-LENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELII 167 (552)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~~~~~ 167 (552)
.......+. ..+... ...........+.+++.+||+.+|.+||++.++.+.+.+++.
T Consensus 254 ~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~ 311 (314)
T 2ivs_A 254 PGIPPERLF---------------------NLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMV 311 (314)
T ss_dssp TTCCGGGHH---------------------HHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCCHHHHH---------------------HHhhcCCcCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 764433211 000000 001111234458999999999999999999999999888763
No 295
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=99.41 E-value=5.7e-15 Score=143.40 Aligned_cols=109 Identities=21% Similarity=0.317 Sum_probs=74.6
Q ss_pred hhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cch
Q 008820 14 AKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFT 90 (552)
Q Consensus 14 ~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~ 90 (552)
.|+. |+++.+.... ......|||.|||||++ .| ....++++|||||||+||+|++|+ ||.
T Consensus 147 ~kl~DFG~s~~~~~~~---~~~~~~gt~~y~aPE~~------~~--------~~~~~~~~DiwslG~il~~ll~g~~Pf~ 209 (336)
T 3h4j_B 147 VKIADFGLSNIMTDGN---FLKTSCGSPNYAAPEVI------NG--------KLYAGPEVDVWSCGIVLYVMLVGRLPFD 209 (336)
T ss_dssp EEECCSSCTBTTTTSB---TTCCCTTSTTTSCGGGS------CC--------SGGGCHHHHHHHHHHHHHHHHHSSCSSB
T ss_pred EEEEEeccceeccCCc---ccccccCCcCcCCHHHH------cC--------CCCCCCccchhHHHHHHHHHHhCCCCCC
Confidence 4555 5666655543 35678899999999998 32 122367999999999999999999 998
Q ss_pred HHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 91 KELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
......+.. ..... . .........++.+++.+||+.+|.+||++.++.+
T Consensus 210 ~~~~~~~~~-~i~~~-----~---------------~~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~ 258 (336)
T 3h4j_B 210 DEFIPNLFK-KVNSC-----V---------------YVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRR 258 (336)
T ss_dssp CSSSTTCBC-CCCSS-----C---------------CCCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTT
T ss_pred CccHHHHHH-HHHcC-----C---------------CCCcccCCHHHHHHHHHHcCCChhHCcCHHHHHh
Confidence 755443210 00000 0 0001112345889999999999999999887655
No 296
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=99.41 E-value=3e-14 Score=137.93 Aligned_cols=115 Identities=18% Similarity=0.259 Sum_probs=73.4
Q ss_pred hhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cch
Q 008820 14 AKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFT 90 (552)
Q Consensus 14 ~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~ 90 (552)
.|+. |+++.+.............||+.|||||++ .+ ....+.++|||||||+||+|++|+ ||.
T Consensus 144 ~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~------~~--------~~~~~~~~DiwslG~il~~ll~g~~pf~ 209 (323)
T 3tki_A 144 LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL------KR--------REFHAEPVDVWSCGIVLTAMLAGELPWD 209 (323)
T ss_dssp EEECCCTTCEECEETTEECCBCSCCSCGGGSCHHHH------HC--------SSBCHHHHHHHHHHHHHHHHHHSSCSCS
T ss_pred EEEEEeeccceeccCCcccccCCCccCcCccCcHHh------cc--------CCCCCCcccHHHHHHHHHHHHhCCCCCC
Confidence 4555 556555433333346678999999999999 22 122357899999999999999999 996
Q ss_pred HHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 91 KELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
........ ...+.... ............+.+++.+||+.+|.+||++.++.+
T Consensus 210 ~~~~~~~~----------------~~~~~~~~--~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~ 261 (323)
T 3tki_A 210 QPSDSCQE----------------YSDWKEKK--TYLNPWKKIDSAPLALLHKILVENPSARITIPDIKK 261 (323)
T ss_dssp SSCTTSHH----------------HHHHHTTC--TTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred CCchHHHH----------------HHHHhccc--ccCCccccCCHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 53322000 00000000 000111223445889999999999999999877654
No 297
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=99.41 E-value=2.4e-14 Score=141.18 Aligned_cols=59 Identities=22% Similarity=0.407 Sum_probs=45.8
Q ss_pred hhhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cc
Q 008820 13 VAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QF 89 (552)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf 89 (552)
..|+. |+|+..... .....||+.|||||++ .+ ..++.++|||||||+||+|+||+ ||
T Consensus 200 ~~kl~DFG~a~~~~~~-----~~~~~gt~~y~aPE~~------~~---------~~~~~~~DiwslG~il~ell~g~~pf 259 (360)
T 3llt_A 200 GIKLIDFGCATFKSDY-----HGSIINTRQYRAPEVI------LN---------LGWDVSSDMWSFGCVLAELYTGSLLF 259 (360)
T ss_dssp CEEECCCTTCEETTSC-----CCSCCSCGGGCCHHHH------TT---------CCCCTTHHHHHHHHHHHHHHHSSCSC
T ss_pred CEEEEeccCceecCCC-----CcCccCcccccCcHHH------cC---------CCCCCccchHHHHHHHHHHHHCCCCC
Confidence 34555 555443332 4578899999999999 33 56789999999999999999999 99
Q ss_pred hH
Q 008820 90 TK 91 (552)
Q Consensus 90 ~~ 91 (552)
..
T Consensus 260 ~~ 261 (360)
T 3llt_A 260 RT 261 (360)
T ss_dssp CC
T ss_pred CC
Confidence 54
No 298
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=99.41 E-value=5.2e-14 Score=138.88 Aligned_cols=109 Identities=9% Similarity=0.148 Sum_probs=71.7
Q ss_pred hhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cch
Q 008820 14 AKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFT 90 (552)
Q Consensus 14 ~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~ 90 (552)
+|++ |+++.+..... .+.+.||+.|||||++ .+ .....++.++|||||||+||||++|+ ||.
T Consensus 154 vkL~DFG~a~~~~~~~~---~~~~~gt~~Y~aPE~~------~~------~~~~~~~~~~DiwSlG~il~elltG~~Pf~ 218 (384)
T 4fr4_A 154 VHITDFNIAAMLPRETQ---ITTMAGTKPYMAPEMF------SS------RKGAGYSFAVDWWSLGVTAYELLRGRRPYH 218 (384)
T ss_dssp EEECCCTTCEECCTTCC---BCCCCSCGGGCCGGGT------CC------CSSCCBCTTHHHHHHHHHHHHHHHSSCSSC
T ss_pred EEEeccceeeeccCCCc---eeccCCCccccCCeee------cc------CCCCCCCccceeechHHHHHHHHhCCCCCC
Confidence 4555 66766554432 5778999999999998 21 01234678999999999999999999 996
Q ss_pred HHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcch
Q 008820 91 KELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLL 155 (552)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~ 155 (552)
....... .....................+.+++.+||+.+|.+||+.
T Consensus 219 ~~~~~~~------------------~~~~~~~~~~~~~~p~~~s~~~~~li~~lL~~dP~~R~s~ 265 (384)
T 4fr4_A 219 IRSSTSS------------------KEIVHTFETTVVTYPSAWSQEMVSLLKKLLEPNPDQRFSQ 265 (384)
T ss_dssp CCTTSCH------------------HHHHHHHHHCCCCCCTTSCHHHHHHHHHHSCSSGGGSCCS
T ss_pred CCCCccH------------------HHHHHHHhhcccCCCCcCCHHHHHHHHHHhcCCHhHhccc
Confidence 4322200 0111111111111122234569999999999999999984
No 299
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=99.40 E-value=1e-13 Score=138.28 Aligned_cols=149 Identities=12% Similarity=0.156 Sum_probs=83.2
Q ss_pred hhhhhhhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhC
Q 008820 9 VTKSVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIG 86 (552)
Q Consensus 9 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg 86 (552)
+.....|+. |+++.+..... .....||+.|||||++....... .....++.++|||||||+||||+||
T Consensus 150 ~~~~~~kL~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~-------~~~~~~~~~~DiwSlG~il~el~tg 219 (396)
T 4eut_A 150 DGQSVYKLTDFGAARELEDDEQ---FVSLYGTEEYLHPDMYERAVLRK-------DHQKKYGATVDLWSIGVTFYHAATG 219 (396)
T ss_dssp TSCEEEEECCGGGCEECCCGGG---SSCSSSCCTTCCHHHHHHHCC---------CHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred CCceeEEEecCCCceEccCCCc---cccccCCccccCHHHhhcccccc-------ccccCCCcHHHHHHHHHHHHHHHHC
Confidence 444456676 66766655443 45678999999999984321100 0013566899999999999999999
Q ss_pred C-CchHHHhh-----hhhhccccCCCchhhhhhh----hHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchh
Q 008820 87 E-QFTKELID-----YIRCVSTKASDDNIACLGM----YMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLT 156 (552)
Q Consensus 87 ~-pf~~~~~~-----~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~ 156 (552)
+ ||...... .+..+.....+..|..... ...|....+ ............+.+++.+||+.+|.+||++.
T Consensus 220 ~~Pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~ 298 (396)
T 4eut_A 220 SLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMP-VSCSLSRGLQVLLTPVLANILEADQEKCWGFD 298 (396)
T ss_dssp SCSEECTTCTTTCHHHHHHHHHSCCTTCCEEEECSTTCCEEEESSCC-TTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHH
T ss_pred CCCCCCCCcccchHHHHHHHhcCCCcccchhheeccCCCcccCccCC-cccccchHHHhhchHHHHHhhccChhhhccHH
Confidence 9 99642211 0100000000000000000 000000000 00000000112378999999999999999999
Q ss_pred hHHHHHHhhhcC
Q 008820 157 NVWKCIRELIIK 168 (552)
Q Consensus 157 ~~~~~l~~~~~~ 168 (552)
++.+.+..++..
T Consensus 299 e~l~~l~~il~~ 310 (396)
T 4eut_A 299 QFFAETSDILHR 310 (396)
T ss_dssp HHHHHHHHHHTC
T ss_pred HHHHHHHHHhhc
Confidence 999988887644
No 300
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=99.40 E-value=3.2e-14 Score=137.89 Aligned_cols=117 Identities=15% Similarity=0.158 Sum_probs=56.9
Q ss_pred hhhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cc
Q 008820 13 VAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QF 89 (552)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf 89 (552)
..|+. |+++....... ......||+.|||||++ . ...+++++|||||||+||+|++|+ ||
T Consensus 147 ~~kl~Dfg~a~~~~~~~~--~~~~~~~t~~y~aPE~~------~---------~~~~~~~~DiwslG~il~~ll~g~~pf 209 (325)
T 3kn6_A 147 EIKIIDFGFARLKPPDNQ--PLKTPCFTLHYAAPELL------N---------QNGYDESCDLWSLGVILYTMLSGQVPF 209 (325)
T ss_dssp EEEECCCTTCEECCC---------------------------------------CCCCHHHHHHHHHHHHHHHHHSSCTT
T ss_pred cEEEeccccceecCCCCC--cccccCCCcCccCHHHh------c---------CCCCCCccchHHHHHHHHHHHhCCCCC
Confidence 45666 55655544332 25677899999999998 2 245678999999999999999999 99
Q ss_pred hHHHhhhhhhccccCCCchhhhhhhhHHHHHHHH----HHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 90 TKELIDYIRCVSTKASDDNIACLGMYMAWMEKVT----YLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
......... . ........+. ..+...+.....++.+++.+||+.+|.+||++.++.+
T Consensus 210 ~~~~~~~~~----~----------~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~ 270 (325)
T 3kn6_A 210 QSHDRSLTC----T----------SAVEIMKKIKKGDFSFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRY 270 (325)
T ss_dssp C-------C----C----------CHHHHHHHHTTTCCCCCSHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTT
T ss_pred CCCcccccc----c----------cHHHHHHHHHcCCCCCCcccccCCCHHHHHHHHHHCCCChhHCCCHHHHhc
Confidence 764322000 0 0000111100 0011111223446899999999999999999887644
No 301
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=99.40 E-value=9.6e-14 Score=134.11 Aligned_cols=128 Identities=16% Similarity=0.168 Sum_probs=74.4
Q ss_pred hhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cch
Q 008820 14 AKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFT 90 (552)
Q Consensus 14 ~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~ 90 (552)
.|++ |+++.+..... ..+...||+.|||||++ .| ...+++++|||||||+||||+||+ ||.
T Consensus 147 ~kl~Dfg~~~~~~~~~~--~~~~~~~t~~y~aPE~~------~~--------~~~~~~~~DiwslG~il~el~~g~~pf~ 210 (317)
T 2pmi_A 147 LKLGDFGLARAFGIPVN--TFSSEVVTLWYRAPDVL------MG--------SRTYSTSIDIWSCGCILAEMITGKPLFP 210 (317)
T ss_dssp EEECCCSSCEETTSCCC--CCCCCCSCCTTCCHHHH------TT--------CCCCCTHHHHHHHHHHHHHHHHSSCSCC
T ss_pred EEECcCccceecCCCcc--cCCCCcccccccCchHh------hC--------CCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 4555 55555543322 25567899999999998 22 234678999999999999999999 995
Q ss_pred HHHhhh----hhhccccCCCchhhhhhhh------------HHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcc
Q 008820 91 KELIDY----IRCVSTKASDDNIACLGMY------------MAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPL 154 (552)
Q Consensus 91 ~~~~~~----~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~ 154 (552)
+..... +....+......|...... ..+... ...........++.+++.+||+.+|.+||+
T Consensus 211 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt 287 (317)
T 2pmi_A 211 GTNDEEQLKLIFDIMGTPNESLWPSVTKLPKYNPNIQQRPPRDLRQV---LQPHTKEPLDGNLMDFLHGLLQLNPDMRLS 287 (317)
T ss_dssp CSSHHHHHHHHHHHHCSCCTTTCGGGGGCTTCCTTCCCCCCCCSHHH---HGGGCSSCCCHHHHHHHHHHSCSSGGGSCC
T ss_pred CCChHHHHHHHHHHhCCCChhHhhhhhhhhhcccccccccchhHHHh---hcccccccCCHHHHHHHHHHCCCCcccCCC
Confidence 533221 1111111111111100000 000000 000111123446899999999999999999
Q ss_pred hhhHHH
Q 008820 155 LTNVWK 160 (552)
Q Consensus 155 ~~~~~~ 160 (552)
+.++.+
T Consensus 288 ~~e~l~ 293 (317)
T 2pmi_A 288 AKQALH 293 (317)
T ss_dssp HHHHTT
T ss_pred HHHHhC
Confidence 877554
No 302
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=99.40 E-value=5.9e-14 Score=132.34 Aligned_cols=102 Identities=20% Similarity=0.228 Sum_probs=69.8
Q ss_pred hhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhhhhhhccccCCCchhh
Q 008820 32 LSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDYIRCVSTKASDDNIA 110 (552)
Q Consensus 32 ~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~~~~~~~~~~~~~~~~ 110 (552)
.....||+.|||||++... .....+.++|||||||++|||++|+ ||.......+.
T Consensus 165 ~~~~~~t~~y~aPE~~~~~------------~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~------------ 220 (271)
T 3kmu_A 165 SPGRMYAPAWVAPEALQKK------------PEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIG------------ 220 (271)
T ss_dssp CTTCBSCGGGSCHHHHHSC------------GGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHH------------
T ss_pred ccCccCCccccChhhhccC------------CCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHH------------
Confidence 3456899999999999311 0122334799999999999999999 99754333110
Q ss_pred hhhhhHHHHHHHHHH--HhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHHhhh
Q 008820 111 CLGMYMAWMEKVTYL--LENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELI 166 (552)
Q Consensus 111 ~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~~~~ 166 (552)
...... ...........+.+++.+||+.+|.+||++.++.+.+..+.
T Consensus 221 ---------~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~ 269 (271)
T 3kmu_A 221 ---------MKVALEGLRPTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQ 269 (271)
T ss_dssp ---------HHHHHSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC
T ss_pred ---------HHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhh
Confidence 000000 00111123445899999999999999999999999888764
No 303
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=99.40 E-value=5.2e-14 Score=136.43 Aligned_cols=119 Identities=18% Similarity=0.167 Sum_probs=77.1
Q ss_pred hhhcc--cccccccccch-hhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhh-CC-
Q 008820 13 VAKVG--CVGSRICDKEV-GLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE- 87 (552)
Q Consensus 13 ~~~~~--~~~~~~~~~~~-~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~llt-g~- 87 (552)
..|+. |+++.+..... ........||+.|||||++. ...++.++|||||||+||||++ |+
T Consensus 189 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~---------------~~~~~~~~Di~slG~il~ell~~g~~ 253 (325)
T 3kul_A 189 VCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIA---------------FRTFSSASDVWSFGVVMWEVLAYGER 253 (325)
T ss_dssp CEEECCCSSCEECC----CCEECC---CCGGGSCHHHHH---------------HCEECHHHHHHHHHHHHHHHHTTSCC
T ss_pred CEEECCCCcccccccCccceeeccCCCCcccccCHhHhc---------------CCCCCcHHHHHHHHHHHHHHHcCCCC
Confidence 34555 55665544322 12244566789999999992 2456789999999999999999 99
Q ss_pred CchHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHH-HhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHHhhh
Q 008820 88 QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYL-LENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELI 166 (552)
Q Consensus 88 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~~~~ 166 (552)
||.......+. ..+... ...........+.+++.+||+.+|.+||++.++.+.+..+.
T Consensus 254 p~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~ 312 (325)
T 3kul_A 254 PYWNMTNRDVI---------------------SSVEEGYRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALI 312 (325)
T ss_dssp TTTTSCHHHHH---------------------HHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CcccCCHHHHH---------------------HHHHcCCCCCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 99654333111 000000 00111123445899999999999999999999999998876
Q ss_pred c
Q 008820 167 I 167 (552)
Q Consensus 167 ~ 167 (552)
.
T Consensus 313 ~ 313 (325)
T 3kul_A 313 R 313 (325)
T ss_dssp H
T ss_pred h
Confidence 4
No 304
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.40 E-value=7.4e-11 Score=114.55 Aligned_cols=262 Identities=11% Similarity=0.070 Sum_probs=164.4
Q ss_pred cceEEEEEc--CCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCcc
Q 008820 253 DCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEP 330 (552)
Q Consensus 253 ~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~ 330 (552)
..|.+++|+ +..++..+.++.++.| .++....+..+...+.+++|++++. +++++..++.|.+||..++.....
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~-l~~~~~~~~~i~~~d~~~~~~~~~ 81 (333)
T 2dg1_A 6 QDLPTLFYSGKSNSAVPIISESELQTI---TAEPWLEISKKGLQLEGLNFDRQGQ-LFLLDVFEGNIFKINPETKEIKRP 81 (333)
T ss_dssp CCCCBCCSCGGGGCSSCCCCGGGSCEE---ECEEEEEEESSCCCEEEEEECTTSC-EEEEETTTCEEEEECTTTCCEEEE
T ss_pred cccceeeecCCccceeEEeecccCccc---ccceeEEEeccCccccCcEECCCCC-EEEEECCCCEEEEEeCCCCcEEEE
Confidence 346667777 5556666778899999 4567777888888889999998665 777888899999999876542221
Q ss_pred ccccccCCCceeeeEEEEeeCCCEEEEeeCC----CcEEEEECCCCceeEEec--CCCCCeEEEEEe-CCEEEEEeC---
Q 008820 331 LKKWNEEKDWRYSGIHALTTSGRYLYTGSGD----RTIKAWSLLDGTLSCTMS--GHKSAVSTLAVC-NGVLYSGSR--- 400 (552)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~d----g~i~iwd~~~~~~~~~~~--~h~~~v~~l~~~-~~~l~s~~~--- 400 (552)
.. .... . ....+++++++++++...+ +.|.+||..+++....+. .+...+.+++++ ++.++.++.
T Consensus 82 ~~---~~~~-~-~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~ 156 (333)
T 2dg1_A 82 FV---SHKA-N-PAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGY 156 (333)
T ss_dssp EE---CSSS-S-EEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCB
T ss_pred ee---CCCC-C-cceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEecccc
Confidence 11 1111 1 1234667788877776666 689999998877654433 245578999998 554444443
Q ss_pred ----CCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEE-ECCCcEEEEeCCc---ceeee--------eccc
Q 008820 401 ----DGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVS-HESGSIKVWRNDK---FMKSM--------QTHK 464 (552)
Q Consensus 401 ----dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g-~~dg~i~iwd~~~---~~~~~--------~~h~ 464 (552)
.+.|..+|..+++........ ..... ++++++++.++++ +.++.|++||... ....+ .++
T Consensus 157 ~~~~~~~l~~~~~~~~~~~~~~~~~--~~~~~-i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~- 232 (333)
T 2dg1_A 157 STNPLGGVYYVSPDFRTVTPIIQNI--SVANG-IALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGH- 232 (333)
T ss_dssp TTBCCEEEEEECTTSCCEEEEEEEE--SSEEE-EEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSS-
T ss_pred ccCCCceEEEEeCCCCEEEEeecCC--Ccccc-eEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCC-
Confidence 356777776655543322211 22333 6899999866554 4578999999632 22211 112
Q ss_pred ceEEEEEe--cCCEEEEEeCCCeEEEEecCCCeeeeeeccCCC-cccCcceEEEEEeC--CeEEEEeCC
Q 008820 465 GSVFAVFL--EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGA-IPCGSVITALLYWQ--GKLFVGCAD 528 (552)
Q Consensus 465 ~~v~~v~~--~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~-~~~~~~v~~l~~~~--~~l~s~s~D 528 (552)
..+..+.+ +|+++++...++.|.+||..+. ....+..... ..+...+.+++|++ +.|++++.+
T Consensus 233 ~~~~~i~~d~~G~l~v~~~~~~~v~~~d~~g~-~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~ 300 (333)
T 2dg1_A 233 EGPDSCCIDSDDNLYVAMYGQGRVLVFNKRGY-PIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSND 300 (333)
T ss_dssp SEEEEEEEBTTCCEEEEEETTTEEEEECTTSC-EEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEEC
T ss_pred CCCCceEECCCCCEEEEEcCCCEEEEECCCCC-EEEEEEcCCCccccccCcceEEECCCCCEEEEEeCc
Confidence 34555665 7888777777899999998543 3333322110 00011477888874 357666655
No 305
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=99.40 E-value=6.4e-14 Score=134.14 Aligned_cols=112 Identities=20% Similarity=0.314 Sum_probs=73.1
Q ss_pred hhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cch
Q 008820 14 AKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFT 90 (552)
Q Consensus 14 ~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~ 90 (552)
.|+. |+++.+..... ..+...||+.|||||++ .+ ......+.++|||||||+||+|++|+ ||.
T Consensus 176 ~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~------~~------~~~~~~~~~~Di~slG~~l~~l~~g~~pf~ 241 (298)
T 2zv2_A 176 IKIADFGVSNEFKGSDA--LLSNTVGTPAFMAPESL------SE------TRKIFSGKALDVWAMGVTLYCFVFGQCPFM 241 (298)
T ss_dssp EEECCCTTCEECSSSSC--EECCCCSCGGGCCGGGC------CT------TCCCEESHHHHHHHHHHHHHHHHHSSCSSC
T ss_pred EEEecCCCccccccccc--cccCCcCCccccChhhh------cc------CCCCCCCchhhhHhHHHHHHHHHHCCCCCC
Confidence 4555 55665554432 25677899999999998 22 00112367899999999999999999 996
Q ss_pred HHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHH--hhhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 91 KELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLL--ENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
......+ ...+.... .+........+.+++.+||+.+|.+||++.++.+
T Consensus 242 ~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~ 292 (298)
T 2zv2_A 242 DERIMCL---------------------HSKIKSQALEFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKL 292 (298)
T ss_dssp CSSHHHH---------------------HHHHHHCCCCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred CccHHHH---------------------HHHHhcccCCCCCccccCHHHHHHHHHHhhcChhhCCCHHHHhc
Confidence 5433211 01110000 0111123445999999999999999999887643
No 306
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=99.40 E-value=4.3e-14 Score=137.27 Aligned_cols=119 Identities=18% Similarity=0.159 Sum_probs=77.3
Q ss_pred hhhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhh-CC-C
Q 008820 13 VAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE-Q 88 (552)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~llt-g~-p 88 (552)
..|+. |+++.+.............||+.|||||++. ...+++++|||||||+||+|+| |+ |
T Consensus 181 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~---------------~~~~~~~~Di~slG~il~ellt~g~~p 245 (327)
T 2yfx_A 181 VAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFM---------------EGIFTSKTDTWSFGVLLWEIFSLGYMP 245 (327)
T ss_dssp CEEECCCHHHHHHHC------CCGGGSCGGGCCHHHHH---------------HCCCCHHHHHHHHHHHHHHHHTTSCCS
T ss_pred eEEECccccccccccccccccCCCcCCCcceeCHhHhc---------------CCCCCchhhHHHHHHHHHHHHcCCCCC
Confidence 45555 3444443333222345678899999999982 2456789999999999999998 98 9
Q ss_pred chHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHH-HhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHHhhhc
Q 008820 89 FTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYL-LENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELII 167 (552)
Q Consensus 89 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~~~~~ 167 (552)
|.......+. ..+... ...........+.+++.+||+.+|.+||++.++.+.+..+..
T Consensus 246 ~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~ 304 (327)
T 2yfx_A 246 YPSKSNQEVL---------------------EFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ 304 (327)
T ss_dssp STTCCHHHHH---------------------HHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCcCHHHHH---------------------HHHhcCCCCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhc
Confidence 9654332110 000000 000111233458899999999999999999999998877653
No 307
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=99.40 E-value=3.9e-14 Score=136.93 Aligned_cols=109 Identities=17% Similarity=0.141 Sum_probs=65.4
Q ss_pred hhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhhhhhhccccCCCchhh
Q 008820 32 LSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDYIRCVSTKASDDNIA 110 (552)
Q Consensus 32 ~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~~~~~~~~~~~~~~~~ 110 (552)
.....||+.|||||++...... ...++.++|||||||+||||++|+ ||........ .|.
T Consensus 178 ~~~~~gt~~y~aPE~~~~~~~~----------~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~----------~~~ 237 (316)
T 2ac3_A 178 LLTPCGSAEYMAPEVVEAFSEE----------ASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDC----------GWD 237 (316)
T ss_dssp ----CCSGGGCCHHHHHHTSHH----------HHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCS----------CC-
T ss_pred cccccCCcCccChHHhhccccc----------ccCCCcccccHhHHHHHHHHHHCCCCCcccccccc----------ccc
Confidence 4456799999999999431110 134568999999999999999999 9966432100 010
Q ss_pred hhhh----hHHHHHHHH----HHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 111 CLGM----YMAWMEKVT----YLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 111 ~~~~----~~~~~~~~~----~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
.... .......+. ..+..........+.+++.+||+.+|.+||++.++.+
T Consensus 238 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 295 (316)
T 2ac3_A 238 RGEACPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQ 295 (316)
T ss_dssp ---CCHHHHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred ccccchhHHHHHHHHHhccCcccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence 0000 001111111 0111112234456999999999999999999888765
No 308
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=99.39 E-value=2.9e-14 Score=137.01 Aligned_cols=113 Identities=19% Similarity=0.173 Sum_probs=73.9
Q ss_pred hhhhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-C
Q 008820 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (552)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-p 88 (552)
...|++ |+++..... ......||+.|+|||++ . ...+++++|||||||++|+|++|+ |
T Consensus 146 ~~~kl~Dfg~~~~~~~~----~~~~~~~~~~y~aPE~~------~---------~~~~~~~~Di~slG~il~~l~~g~~p 206 (304)
T 2jam_A 146 SKIMITDFGLSKMEQNG----IMSTACGTPGYVAPEVL------A---------QKPYSKAVDCWSIGVITYILLCGYPP 206 (304)
T ss_dssp CCEEBCSCSTTCCCCCB----TTHHHHSCCCBCCTTTB------S---------SCSCCHHHHHHHHHHHHHHHHHSSCT
T ss_pred CCEEEccCCcceecCCC----ccccccCCCCccChHHh------c---------cCCCCchhhHHHHHHHHHHHHHCCCC
Confidence 345555 445443332 24567899999999998 2 255678999999999999999999 9
Q ss_pred chHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 89 FTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 89 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
|.......+. ..+.......+..........+.+++.+||+.+|.+||++.++.+
T Consensus 207 f~~~~~~~~~-----------------~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (304)
T 2jam_A 207 FYEETESKLF-----------------EKIKEGYYEFESPFWDDISESAKDFICHLLEKDPNERYTCEKALS 261 (304)
T ss_dssp TTTSCHHHHH-----------------HHHHHCCCCCCTTTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred CCCCCHHHHH-----------------HHHHcCCCCCCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 9664332110 000000000011111223456899999999999999999987665
No 309
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=99.39 E-value=5.5e-14 Score=137.53 Aligned_cols=118 Identities=14% Similarity=0.150 Sum_probs=78.7
Q ss_pred hhhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhh-CC-C
Q 008820 13 VAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE-Q 88 (552)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~llt-g~-p 88 (552)
..|+. |+++.+.............||+.|||||++. ...+++++|||||||+||||+| |+ |
T Consensus 212 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~---------------~~~~~~~~Di~slG~il~el~t~g~~p 276 (343)
T 1luf_A 212 VVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIF---------------YNRYTTESDVWAYGVVLWEIFSYGLQP 276 (343)
T ss_dssp CEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHH---------------HCCCCHHHHHHHHHHHHHHHHTTTCCT
T ss_pred eEEEeecCCCcccccCccccccCCCcccceecChhhhc---------------cCCcCcccccHHHHHHHHHHHhcCCCc
Confidence 34555 4555554443323356678999999999982 2456789999999999999999 99 9
Q ss_pred chHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHH-HhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHHhhh
Q 008820 89 FTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYL-LENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELI 166 (552)
Q Consensus 89 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~~~~ 166 (552)
|.......+. ..+... ...........+.+++.+||+.+|.+||++.++.+.+.++.
T Consensus 277 ~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~ 334 (343)
T 1luf_A 277 YYGMAHEEVI---------------------YYVRDGNILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMC 334 (343)
T ss_dssp TTTSCHHHHH---------------------HHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred CCCCChHHHH---------------------HHHhCCCcCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHH
Confidence 9764333111 000000 00111123445899999999999999999999999988875
No 310
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=99.39 E-value=9.1e-14 Score=131.70 Aligned_cols=94 Identities=17% Similarity=0.302 Sum_probs=65.3
Q ss_pred hhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhhhhhhccccCCCchhh
Q 008820 32 LSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDYIRCVSTKASDDNIA 110 (552)
Q Consensus 32 ~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~~~~~~~~~~~~~~~~ 110 (552)
.....||+.|+|||++ .+ ...++++|||||||+||+|++|+ ||.......
T Consensus 164 ~~~~~~~~~y~aPE~~------~~---------~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-------------- 214 (279)
T 3fdn_A 164 RTDLCGTLDYLPPEMI------EG---------RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE-------------- 214 (279)
T ss_dssp ----CCCCTTCCHHHH------TT---------CCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHH--------------
T ss_pred ccccCCCCCccCHhHh------cc---------CCCCccchhHhHHHHHHHHHHCCCCCCCCcHHH--------------
Confidence 4567899999999998 32 45678999999999999999999 997643331
Q ss_pred hhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHH
Q 008820 111 CLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKC 161 (552)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~ 161 (552)
...................+.+++.+||+.+|.+||++.++.+.
T Consensus 215 -------~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h 258 (279)
T 3fdn_A 215 -------TYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEH 258 (279)
T ss_dssp -------HHHHHHHTCCCCCTTSCHHHHHHHHHHCCSSGGGSCCHHHHHHC
T ss_pred -------HHHHHHhCCCCCCCcCCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 11111111111112234458999999999999999999887764
No 311
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=99.39 E-value=5.4e-14 Score=133.93 Aligned_cols=115 Identities=18% Similarity=0.200 Sum_probs=63.4
Q ss_pred hhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhh----hhhhccccCCC
Q 008820 32 LSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELID----YIRCVSTKASD 106 (552)
Q Consensus 32 ~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~----~~~~~~~~~~~ 106 (552)
.+...||+.|||||++ .+ ...+++++|||||||+||||++|+ ||...... .+.........
T Consensus 157 ~~~~~~t~~y~aPE~~------~~--------~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 222 (288)
T 1ob3_A 157 YTHEIVTLWYRAPDVL------MG--------SKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNS 222 (288)
T ss_dssp -----CCCTTCCHHHH------TT--------CCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCT
T ss_pred cccccccccccCchhe------eC--------CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCCh
Confidence 4566899999999998 22 234678999999999999999999 99543221 11100011111
Q ss_pred chhhhhhhhHHHHHHHH---HH-HhhhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 107 DNIACLGMYMAWMEKVT---YL-LENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 107 ~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
..|.............. .. ..........++.+++.+||+.+|.+||++.++.+
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 280 (288)
T 1ob3_A 223 KNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280 (288)
T ss_dssp TTSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred hhchhhhcccccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 11110000000000000 00 00111123445889999999999999999887654
No 312
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=99.39 E-value=1.7e-13 Score=131.91 Aligned_cols=106 Identities=16% Similarity=0.103 Sum_probs=69.5
Q ss_pred hhhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cc
Q 008820 13 VAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QF 89 (552)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf 89 (552)
.+|+. |+++.+..... .....||+.|||||++ . +.+++++|||||||+||||++|. ||
T Consensus 195 ~~kl~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~------~----------~~~~~~~DiwslG~il~el~~g~~~~ 255 (311)
T 3p1a_A 195 RCKLGDFGLLVELGTAGA---GEVQEGDPRYMAPELL------Q----------GSYGTAADVFSLGLTILEVACNMELP 255 (311)
T ss_dssp CEEECCCTTCEECC---------CCCCCGGGCCGGGG------G----------TCCSTHHHHHHHHHHHHHHHHTCCCC
T ss_pred CEEEccceeeeecccCCC---CcccCCCccccCHhHh------c----------CCCCchhhHHHHHHHHHHHHhCCCCC
Confidence 46666 55555544332 4567799999999998 2 35678999999999999999997 55
Q ss_pred -hHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 90 -TKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 90 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
.......+. ... . +.........++.+++.+||+.+|.+||++.++.+
T Consensus 256 ~~~~~~~~~~--~~~-~--------------------~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 304 (311)
T 3p1a_A 256 HGGEGWQQLR--QGY-L--------------------PPEFTAGLSSELRSVLVMMLEPDPKLRATAEALLA 304 (311)
T ss_dssp SSHHHHHHHT--TTC-C--------------------CHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred CCccHHHHHh--ccC-C--------------------CcccccCCCHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 443333221 000 0 00011123445899999999999999999887665
No 313
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=99.39 E-value=6.8e-14 Score=140.46 Aligned_cols=120 Identities=13% Similarity=0.135 Sum_probs=76.0
Q ss_pred hhhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cc
Q 008820 13 VAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QF 89 (552)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf 89 (552)
.+|++ |+|+.+..... ...+..+|||.|||||++..... ....++.++|||||||+||||++|+ ||
T Consensus 213 ~vkL~DFGla~~~~~~~~-~~~~~~~GT~~Y~APE~l~~~~~----------~~~~~~~~~DvwSlGvil~elltG~~Pf 281 (437)
T 4aw2_A 213 HIRLADFGSCLKLMEDGT-VQSSVAVGTPDYISPEILQAMEG----------GKGRYGPECDWWSLGVCMYEMLYGETPF 281 (437)
T ss_dssp CEEECCCTTCEECCTTSC-EECCSCCSCGGGCCHHHHHHHHT----------SCCEECTHHHHHHHHHHHHHHHHSSCTT
T ss_pred CEEEcchhhhhhcccCCC-cccccccCCcCeeChHHHhhccc----------CCCCCCCcCeeHHHHHHHHHHHhCCCCC
Confidence 45666 66666544332 12456799999999999942211 1345778999999999999999999 99
Q ss_pred hHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHH-hhhhcCccccHHHHHHhhcccCCCC--CcchhhHHH
Q 008820 90 TKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLL-ENKFGSEFVSLQLMFCQCLNFDPGC--RPLLTNVWK 160 (552)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~l~~~p~~--R~~~~~~~~ 160 (552)
.+.+...+ +..+........ .........++.+++.+||+.+|++ |+++.++.+
T Consensus 282 ~~~~~~~~-----------------~~~i~~~~~~~~~p~~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~ 338 (437)
T 4aw2_A 282 YAESLVET-----------------YGKIMNHKERFQFPTQVTDVSENAKDLIRRLICSREHRLGQNGIEDFKK 338 (437)
T ss_dssp CCSSHHHH-----------------HHHHHTHHHHCCCCSSCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHT
T ss_pred CCCChhHH-----------------HHhhhhccccccCCcccccCCHHHHHHHHHHhcccccccCCCCHHHHhC
Confidence 76443311 111111100111 0111224556999999999988877 888776554
No 314
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=99.39 E-value=1.7e-13 Score=135.69 Aligned_cols=60 Identities=27% Similarity=0.594 Sum_probs=45.4
Q ss_pred hhhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cc
Q 008820 13 VAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QF 89 (552)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf 89 (552)
..|+. |+++.+... .+...||+.|||||++ .+ ..+++++|||||||+||||+||+ ||
T Consensus 176 ~~kl~Dfg~a~~~~~~-----~~~~~~t~~y~aPE~~------~~---------~~~~~~~Di~slG~il~el~~g~~pf 235 (373)
T 1q8y_A 176 QIKIADLGNACWYDEH-----YTNSIQTREYRSPEVL------LG---------APWGCGADIWSTACLIFELITGDFLF 235 (373)
T ss_dssp EEEECCCTTCEETTBC-----CCSCCSCGGGCCHHHH------HT---------CCCCTHHHHHHHHHHHHHHHHSSCCC
T ss_pred eEEEcccccccccCCC-----CCCCCCCccccCcHHH------hC---------CCCCchHhHHHHHHHHHHHHhCCCCC
Confidence 45666 556555443 4567899999999999 22 45678999999999999999999 99
Q ss_pred hHH
Q 008820 90 TKE 92 (552)
Q Consensus 90 ~~~ 92 (552)
...
T Consensus 236 ~~~ 238 (373)
T 1q8y_A 236 EPD 238 (373)
T ss_dssp ---
T ss_pred CCC
Confidence 754
No 315
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=99.39 E-value=7.4e-14 Score=135.66 Aligned_cols=132 Identities=17% Similarity=0.139 Sum_probs=68.3
Q ss_pred hhhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cc
Q 008820 13 VAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QF 89 (552)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf 89 (552)
..|+. |+++.+..... ......||+.|||||++ .+ ...+++++|||||||+||||++|+ ||
T Consensus 175 ~~kl~Dfg~a~~~~~~~~--~~~~~~~t~~y~aPE~~------~~--------~~~~~~~~DiwslG~il~ell~g~~pf 238 (329)
T 3gbz_A 175 VLKIGDFGLARAFGIPIR--QFTHEIITLWYRPPEIL------LG--------SRHYSTSVDIWSIACIWAEMLMKTPLF 238 (329)
T ss_dssp EEEECCTTHHHHHC-------------CCTTCCHHHH------TT--------CCCCCTHHHHHHHHHHHHHHHHSSCSS
T ss_pred eEEECcCCCccccCCccc--ccCCCcCCccccCHHHh------cC--------CCCCCcHHHHHHHHHHHHHHHHCCCCc
Confidence 45666 45555443322 25667899999999999 22 234678999999999999999999 99
Q ss_pred hHHHhhhh----hhccccCCCchhhhhhhhHHHHHHHHH-----HHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 90 TKELIDYI----RCVSTKASDDNIACLGMYMAWMEKVTY-----LLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 90 ~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
........ ...........|........+....+. ...........++.+++.+||+.+|.+||++.++.+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 318 (329)
T 3gbz_A 239 PGDSEIDQLFKIFEVLGLPDDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE 318 (329)
T ss_dssp CCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred CCCCHHHHHHHHHHHhCCCchhhhhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence 55332211 100000011111000000000000000 000000112345889999999999999999887655
No 316
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=99.39 E-value=8.6e-14 Score=136.84 Aligned_cols=60 Identities=22% Similarity=0.412 Sum_probs=46.3
Q ss_pred hhhhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-C
Q 008820 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (552)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-p 88 (552)
...|+. |+++..... .....||+.|||||++ . ...++.++|||||||+||||++|+ |
T Consensus 179 ~~~kl~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~------~---------~~~~~~~~Di~slG~il~el~~g~~p 238 (355)
T 2eu9_A 179 TSIRVADFGSATFDHEH-----HTTIVATRHYRPPEVI------L---------ELGWAQPCDVWSIGCILFEYYRGFTL 238 (355)
T ss_dssp CCEEECCCTTCEETTSC-----CCSSCSCGGGCCHHHH------T---------TCCCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred CcEEEeecCcccccccc-----ccCCcCCCcccCCeee------e---------cCCCCCccchHHHHHHHHHHHhCCCC
Confidence 345666 455443333 4567899999999999 2 356778999999999999999999 9
Q ss_pred chH
Q 008820 89 FTK 91 (552)
Q Consensus 89 f~~ 91 (552)
|..
T Consensus 239 f~~ 241 (355)
T 2eu9_A 239 FQT 241 (355)
T ss_dssp CCC
T ss_pred CCC
Confidence 954
No 317
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=99.39 E-value=9e-14 Score=133.31 Aligned_cols=128 Identities=13% Similarity=0.170 Sum_probs=74.8
Q ss_pred hhhcc--cccccccccchh--hhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhC--
Q 008820 13 VAKVG--CVGSRICDKEVG--LFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIG-- 86 (552)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg-- 86 (552)
.+|+. |+++.+...... .......||+.|||||++ .+.. ......+++++|||||||+||||+||
T Consensus 151 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~------~~~~---~~~~~~~~~~~DvwslG~il~el~tg~~ 221 (301)
T 3q4u_A 151 QCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVL------DETI---QVDCFDSYKRVDIWAFGLVLWEVARRMV 221 (301)
T ss_dssp CEEECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHH------TTCC---CTTCHHHHHHHHHHHHHHHHHHHHTTBC
T ss_pred CEEEeeCCCeeecccccccccccccccccccceeChhhh------cCcC---CCCcccCCchhhHHHHHHHHHHHHhhhc
Confidence 35565 555544433221 113456899999999999 2200 00001455799999999999999999
Q ss_pred --------C-CchHHHhhhhhhccccCCCchhhhhhhhHHHHHHH------HHHHhh-hhcCccccHHHHHHhhcccCCC
Q 008820 87 --------E-QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKV------TYLLEN-KFGSEFVSLQLMFCQCLNFDPG 150 (552)
Q Consensus 87 --------~-pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~-~~~~~~~~l~~~~~~~l~~~p~ 150 (552)
+ ||......... ........ +..+.. ........+.+++.+||+.+|.
T Consensus 222 ~~~~~~~~~~pf~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~ 285 (301)
T 3q4u_A 222 SNGIVEDYKPPFYDVVPNDPS----------------FEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPS 285 (301)
T ss_dssp BTTBCCCCCCTTTTTSCSSCC----------------HHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGG
T ss_pred CccccccccccccccCCCCcc----------------hhhhhHHHhccCCCCCCChhhccCccHHHHHHHHHHHhhcChh
Confidence 7 87442211000 00000000 000000 0000123488999999999999
Q ss_pred CCcchhhHHHHHHhh
Q 008820 151 CRPLLTNVWKCIREL 165 (552)
Q Consensus 151 ~R~~~~~~~~~l~~~ 165 (552)
+||++.++.+.+.++
T Consensus 286 ~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 286 ARLTALRIKKTLTKI 300 (301)
T ss_dssp GSCCHHHHHHHHHHH
T ss_pred hCCCHHHHHHHHhcc
Confidence 999999999987754
No 318
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=99.39 E-value=7.2e-14 Score=132.57 Aligned_cols=116 Identities=17% Similarity=0.200 Sum_probs=69.9
Q ss_pred hhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhh-CC-Cc
Q 008820 14 AKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE-QF 89 (552)
Q Consensus 14 ~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~llt-g~-pf 89 (552)
.|+. |+++.+...... ......||+.|||||++. ...+++++|||||||+||||++ |+ ||
T Consensus 155 ~kl~Dfg~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~---------------~~~~~~~~Di~slG~~l~ell~~g~~pf 218 (281)
T 1mp8_A 155 VKLGDFGLSRYMEDSTYY-KASKGKLPIKWMAPESIN---------------FRRFTSASDVWMFGVCMWEILMHGVKPF 218 (281)
T ss_dssp EEECC--------------------CCGGGCCHHHHH---------------HCCCSHHHHHHHHHHHHHHHHTTSCCTT
T ss_pred EEECccccccccCccccc-ccccCCCcccccChhhcc---------------cCCCCCccCchHHHHHHHHHHhcCCCCC
Confidence 4555 555555443321 244567889999999982 2456789999999999999997 99 99
Q ss_pred hHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHH-HhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHHhhh
Q 008820 90 TKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYL-LENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELI 166 (552)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~~~~ 166 (552)
.......+. ..+... ...........+.+++.+||+.+|.+||++.++.+.+..++
T Consensus 219 ~~~~~~~~~---------------------~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~ 275 (281)
T 1mp8_A 219 QGVKNNDVI---------------------GRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTIL 275 (281)
T ss_dssp TTCCGGGHH---------------------HHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CcCCHHHHH---------------------HHHHcCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 764332110 000000 00111223445899999999999999999999999888775
No 319
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=99.39 E-value=1.1e-13 Score=130.25 Aligned_cols=117 Identities=17% Similarity=0.200 Sum_probs=79.0
Q ss_pred hhhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhh-CC-C
Q 008820 13 VAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE-Q 88 (552)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~llt-g~-p 88 (552)
..|+. |+++.+..... .......||+.|+|||++. ...+++++|||||||++|+|++ |+ |
T Consensus 142 ~~kl~dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~---------------~~~~~~~~Di~slG~il~~l~~~g~~p 205 (267)
T 3t9t_A 142 VIKVSDFGMTRFVLDDQY-TSSTGTKFPVKWASPEVFS---------------FSRYSSKSDVWSFGVLMWEVFSEGKIP 205 (267)
T ss_dssp CEEECCTTGGGGBCCHHH-HSTTSTTCCGGGCCHHHHH---------------HCCCCHHHHHHHHHHHHHHHHTTSCCT
T ss_pred CEEEcccccccccccccc-cccccccccccccChhhhc---------------CCCccchhchhhhHHHHHHHhccCCCC
Confidence 35555 44555443322 2345677899999999992 2456789999999999999999 89 9
Q ss_pred chHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHH-HhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHHhhh
Q 008820 89 FTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYL-LENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELI 166 (552)
Q Consensus 89 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~~~~ 166 (552)
|.......+. ..+... ...........+.+++.+||+.+|.+||++.++.+.+.++.
T Consensus 206 ~~~~~~~~~~---------------------~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~ 263 (267)
T 3t9t_A 206 YENRSNSEVV---------------------EDISTGFRLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIA 263 (267)
T ss_dssp TTTCCHHHHH---------------------HHHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCCCHHHHH---------------------HHHhcCCcCCCCccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 9764333110 000000 00011123445899999999999999999999999988775
No 320
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.39 E-value=2.8e-11 Score=130.05 Aligned_cols=241 Identities=9% Similarity=-0.027 Sum_probs=151.8
Q ss_pred cCccceEEEEEc--CCEEE-----EEeCCCcEEEEeCCCCeEEEEEeCCCCCe--EEEEEecCCCCEEEEEcCCCc----
Q 008820 250 GHRDCVTGLAVG--GGFLF-----SSSFDKSIHVWSLKDFSHVHTFKGHDHKV--MAVVYVDEDQPLCISGDSGGG---- 316 (552)
Q Consensus 250 ~H~~~V~~l~~s--~~~l~-----s~s~dg~I~iwd~~~~~~~~~~~~h~~~v--~~v~~~~~~~~~l~s~~~dg~---- 316 (552)
+|...+.+++|| |++|+ +|+.+.+|++||+.+++.+. ..+...+ ..++|+|++.. |+.++.|..
T Consensus 118 ~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~--~~~~~~~~~~~~~wspDg~~-l~~~~~d~~~~~~ 194 (695)
T 2bkl_A 118 DGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSK--VDVIEGGKYATPKWTPDSKG-FYYEWLPTDPSIK 194 (695)
T ss_dssp SSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCS--SCCBSCCTTCCCEECTTSSE-EEEEECCCCTTSC
T ss_pred CCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcC--CcccCcccccceEEecCCCE-EEEEEecCCCCCc
Confidence 566789999999 88888 45556789999999988641 1122222 68899998774 455666555
Q ss_pred ---------EEEEeCCCCCCCc-cccccccCCCceeeeEEEEeeCCCEEEEeeCCC----cEEEEECCCCceeEEecCCC
Q 008820 317 ---------IFVWSFSFPLGHE-PLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDR----TIKAWSLLDGTLSCTMSGHK 382 (552)
Q Consensus 317 ---------i~vwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg----~i~iwd~~~~~~~~~~~~h~ 382 (552)
|++|++.++.... .+.....+.. ......++++|++|+.++.++ .|++||..+++. ..+..+.
T Consensus 195 ~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~--~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~-~~l~~~~ 271 (695)
T 2bkl_A 195 VDERPGYTTIRYHTLGTEPSKDTVVHERTGDPT--TFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDF-RLLVKGV 271 (695)
T ss_dssp GGGGGGGCEEEEEETTSCGGGCEEEECCCCCTT--CEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSC-EEEEECS
T ss_pred cccCCCCCEEEEEECCCCchhceEEEecCCCCE--EEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCce-EEeecCC
Confidence 9999998765321 1111111111 112347899999887777665 677777655544 3444455
Q ss_pred CCeEEEEEeCCEEEEEeC----CCcEEEEECCCCce--eEEEecCCCCceEEEEEEcCCCCEEEEEECCCcEEEEe--C-
Q 008820 383 SAVSTLAVCNGVLYSGSR----DGTIRLWSLSDHSL--LTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWR--N- 453 (552)
Q Consensus 383 ~~v~~l~~~~~~l~s~~~----dg~i~iwd~~~~~~--~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd--~- 453 (552)
..+....+.++.++..+. ++.|.+||+.++.. ...+..+........++++ ++.++++...|+..++|. .
T Consensus 272 ~~~~~~~~~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~ 350 (695)
T 2bkl_A 272 GAKYEVHAWKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-GGHLSLEYLKDATSEVRVATLK 350 (695)
T ss_dssp SCCEEEEEETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-TTEEEEEEEETTEEEEEEEETT
T ss_pred CceEEEEecCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCC
Confidence 556666667332444443 58899999987753 2344333322222324566 677888888999888885 3
Q ss_pred Ccceeeeecc-cceEEEEEe--cCCEEEEEe----CCCeEEEEecCCCeee
Q 008820 454 DKFMKSMQTH-KGSVFAVFL--EGKWLFTGG----WDKTVSVQELAGDEFE 497 (552)
Q Consensus 454 ~~~~~~~~~h-~~~v~~v~~--~~~~l~sgs----~dg~i~iwd~~~~~~~ 497 (552)
++....+..+ .+.+..+++ +++.++... ..++|++||+.+++..
T Consensus 351 g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~~~ 401 (695)
T 2bkl_A 351 GKPVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGKSE 401 (695)
T ss_dssp CCEEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCCEE
T ss_pred CCeeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcEE
Confidence 3344555554 566666654 676666322 3478999999887643
No 321
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=99.38 E-value=1.2e-13 Score=132.66 Aligned_cols=96 Identities=19% Similarity=0.257 Sum_probs=66.9
Q ss_pred hhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhhhhhhccccCCCchhh
Q 008820 32 LSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDYIRCVSTKASDDNIA 110 (552)
Q Consensus 32 ~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~~~~~~~~~~~~~~~~ 110 (552)
.....||+.|+|||++ .+ .....+.++|||||||++|||++|+ ||.......+
T Consensus 168 ~~~~~~~~~y~aPE~~------~~-------~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~------------- 221 (305)
T 2wtk_C 168 CRTSQGSPAFQPPEIA------NG-------LDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKL------------- 221 (305)
T ss_dssp ECCCCSCGGGCCHHHH------TC-------CSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-------------
T ss_pred cccCCCCCCCcChhhc------cC-------cccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHHH-------------
Confidence 4566799999999998 32 1233467999999999999999999 9976443311
Q ss_pred hhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHH
Q 008820 111 CLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKC 161 (552)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~ 161 (552)
...+.............++.+++.+||+.+|.+||++.++.+.
T Consensus 222 --------~~~i~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 264 (305)
T 2wtk_C 222 --------FENIGKGSYAIPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQH 264 (305)
T ss_dssp --------HHHHHHCCCCCCSSSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred --------HHHHhcCCCCCCCccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 1111110111112234458999999999999999999887663
No 322
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=99.38 E-value=1.3e-13 Score=138.46 Aligned_cols=122 Identities=17% Similarity=0.191 Sum_probs=75.1
Q ss_pred hhhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cc
Q 008820 13 VAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QF 89 (552)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf 89 (552)
..|+. |+++.+...+. .....||+.|||||++ .| ...++.++|||||||+||||++|+ ||
T Consensus 195 ~~kl~DFG~a~~~~~~~~---~~~~~~t~~y~aPE~~------~~--------~~~~~~~~DiwSlG~il~ell~G~~pf 257 (420)
T 1j1b_A 195 VLKLCDFGSAKQLVRGEP---NVSYICSRYYRAPELI------FG--------ATDYTSSIDVWSAGCVLAELLLGQPIF 257 (420)
T ss_dssp EEEECCCTTCEECCTTCC---CCSCCSCTTSCCHHHH------TT--------CSSCCTHHHHHHHHHHHHHHHHSSCSS
T ss_pred eEEeccchhhhhcccCCC---ceeeeeCCCcCCHHHH------cC--------CCCCCchhhhHHHHHHHHHHHhCCCCC
Confidence 45666 66766654432 4567899999999998 22 235678999999999999999999 99
Q ss_pred hHHHhh-hhhh---ccccCCCchhhhhhhhHHHHHHHHH-----H--------HhhhhcCccccHHHHHHhhcccCCCCC
Q 008820 90 TKELID-YIRC---VSTKASDDNIACLGMYMAWMEKVTY-----L--------LENKFGSEFVSLQLMFCQCLNFDPGCR 152 (552)
Q Consensus 90 ~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~-----~--------~~~~~~~~~~~l~~~~~~~l~~~p~~R 152 (552)
.+.... .+.. ..+... ...+....+. . ..........++.+++.+||+++|.+|
T Consensus 258 ~~~~~~~~l~~i~~~lg~p~---------~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R 328 (420)
T 1j1b_A 258 PGDSGVDQLVEIIKVLGTPT---------REQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTAR 328 (420)
T ss_dssp CCSSHHHHHHHHHHHHCSCC---------HHHHHHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGS
T ss_pred CCCCHHHHHHHHHHHhCCCC---------HHHHHhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHC
Confidence 654322 1110 000000 0000000000 0 000001223468999999999999999
Q ss_pred cchhhHHH
Q 008820 153 PLLTNVWK 160 (552)
Q Consensus 153 ~~~~~~~~ 160 (552)
|++.++.+
T Consensus 329 ~t~~e~l~ 336 (420)
T 1j1b_A 329 LTPLEACA 336 (420)
T ss_dssp CCHHHHHT
T ss_pred CCHHHHhC
Confidence 99887654
No 323
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=99.38 E-value=1.3e-13 Score=133.96 Aligned_cols=131 Identities=19% Similarity=0.141 Sum_probs=77.5
Q ss_pred hhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cch
Q 008820 14 AKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFT 90 (552)
Q Consensus 14 ~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~ 90 (552)
+|++ |+++.+..... .......||+.|||||++. ...+++++|||||||+||+|+||+ ||+
T Consensus 173 ~kl~Dfg~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~---------------~~~~~~~~Di~slG~il~~l~~g~~pf~ 236 (326)
T 3uim_A 173 AVVGDFGLAKLMDYKDT-HVTTAVRGTIGHIAPEYLS---------------TGKSSEKTDVFGYGVMLLELITGQRAFD 236 (326)
T ss_dssp EEECCCSSCEECCSSSS-CEECCCCSCGGGCCHHHHH---------------HSEECHHHHHHHHHHHHHHHHHCCCSBC
T ss_pred EEeccCccccccCcccc-cccccccCCcCccCHHHhc---------------cCCCCccccchhHHHHHHHHHhCCCccc
Confidence 4555 55555443322 2355677999999999982 245678999999999999999999 997
Q ss_pred HHHhhhhhhccccCCCchhhh--hh--hhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHHhhh
Q 008820 91 KELIDYIRCVSTKASDDNIAC--LG--MYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELI 166 (552)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~--~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~~~~ 166 (552)
......- .......|.. .. ....... ..............+.+++.+||+.+|.+||++.++.+.+....
T Consensus 237 ~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~~ 310 (326)
T 3uim_A 237 LARLAND----DDVMLLDWVKGLLKEKKLEALVD--VDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDG 310 (326)
T ss_dssp HHHHTTT----SCSBHHHHHTTTTSSCCSTTSSC--TTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTSS
T ss_pred ccccccc----cchhHHHHHHHHhhchhhhhhcC--hhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCcc
Confidence 5432210 0000000000 00 0000000 00000000001224889999999999999999999999887643
No 324
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=99.38 E-value=1e-13 Score=133.54 Aligned_cols=100 Identities=15% Similarity=0.146 Sum_probs=71.4
Q ss_pred hccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhhhhhhccccCCCchhhhh
Q 008820 34 DFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDYIRCVSTKASDDNIACL 112 (552)
Q Consensus 34 ~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~~~~~~~~~~~~~~~~~~ 112 (552)
.+.||+.|||||++ .+ ..+++++|||||||+||||++|. ||......... ..
T Consensus 181 ~~~gt~~y~aPE~~------~~---------~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~---~~--------- 233 (310)
T 3s95_A 181 TVVGNPYWMAPEMI------NG---------RSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMD---FG--------- 233 (310)
T ss_dssp CCCSCGGGCCHHHH------TT---------CCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTT---SS---------
T ss_pred ccCCCcceeCHHHh------cC---------CCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHH---Hh---------
Confidence 67899999999999 32 56678999999999999999999 88653322110 00
Q ss_pred hhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHHhhh
Q 008820 113 GMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELI 166 (552)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~~~~ 166 (552)
....... ...........+.+++.+||+.+|.+||++.++.+.+..+.
T Consensus 234 ---~~~~~~~---~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~ 281 (310)
T 3s95_A 234 ---LNVRGFL---DRYCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLR 281 (310)
T ss_dssp ---BCHHHHH---HHTCCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ---hhhhccc---cccCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 0001110 11112234556999999999999999999999988877664
No 325
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=99.38 E-value=1.1e-13 Score=131.15 Aligned_cols=117 Identities=21% Similarity=0.176 Sum_probs=74.5
Q ss_pred hhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhh-CC-Cc
Q 008820 14 AKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE-QF 89 (552)
Q Consensus 14 ~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~llt-g~-pf 89 (552)
.|+. |+++.+...... ......||+.|+|||++. ...+++++|||||||+||||+| |+ ||
T Consensus 152 ~kl~Dfg~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~---------------~~~~~~~~Di~slG~il~~llt~g~~p~ 215 (281)
T 3cc6_A 152 VKLGDFGLSRYIEDEDYY-KASVTRLPIKWMSPESIN---------------FRRFTTASDVWMFAVCMWEILSFGKQPF 215 (281)
T ss_dssp EEECCCCGGGCC----------CCCCCGGGCCHHHHH---------------HCCCCHHHHHHHHHHHHHHHHTTTCCTT
T ss_pred EEeCccCCCccccccccc-ccccCCCCcceeCchhhc---------------cCCCCchhccHHHHHHHHHHHhCCCCCc
Confidence 4555 445555443321 245567899999999982 2456789999999999999998 99 99
Q ss_pred hHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHHhhh
Q 008820 90 TKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELI 166 (552)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~~~~ 166 (552)
.......+. ...... ............+.+++.+||+.+|.+||++.++.+.+..+.
T Consensus 216 ~~~~~~~~~-----------------~~~~~~---~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~ 272 (281)
T 3cc6_A 216 FWLENKDVI-----------------GVLEKG---DRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVY 272 (281)
T ss_dssp TTSCGGGHH-----------------HHHHHT---CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ccCChHHHH-----------------HHHhcC---CCCCCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHH
Confidence 653322110 000000 000111123445899999999999999999999999888765
No 326
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=99.38 E-value=4.2e-14 Score=137.75 Aligned_cols=117 Identities=19% Similarity=0.174 Sum_probs=56.1
Q ss_pred hhhhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-C
Q 008820 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (552)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-p 88 (552)
...|+. |+++.+... ......||+.|||||++ . ...+++++|||||||+||+|++|+ |
T Consensus 168 ~~~kl~Dfg~~~~~~~~----~~~~~~~t~~y~aPE~~------~---------~~~~~~~~Di~slG~il~~l~~g~~p 228 (336)
T 3fhr_A 168 AVLKLTDFGFAKETTQN----ALQTPCYTPYYVAPEVL------G---------PEKYDKSCDMWSLGVIMYILLCGFPP 228 (336)
T ss_dssp CCEEECCCTTCEEC-----------------------------------------CHHHHHHHHHHHHHHHHHHHHSSCC
T ss_pred ceEEEeccccceecccc----ccccCCCCcCccChhhh------C---------CCCCCchhhHHHHHHHHHHHHHCCCC
Confidence 345666 555554433 25677899999999998 2 245678999999999999999999 9
Q ss_pred chHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 89 FTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 89 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
|.......+.. .............+.........++.+++.+||+.+|.+||++.++.+
T Consensus 229 f~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 287 (336)
T 3fhr_A 229 FYSNTGQAISP-------------GMKRRIRLGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMN 287 (336)
T ss_dssp C----------------------------------CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred CCCccchhhhh-------------hHHHhhhccccccCchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 97654331100 000011111111111222234556999999999999999999988776
No 327
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=99.38 E-value=8.8e-14 Score=130.97 Aligned_cols=116 Identities=17% Similarity=0.181 Sum_probs=76.8
Q ss_pred hhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhh-CC-Cc
Q 008820 14 AKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE-QF 89 (552)
Q Consensus 14 ~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~llt-g~-pf 89 (552)
.|+. |+++.+..... .......||+.|||||++. ...+++++|||||||++|+|+| |+ ||
T Consensus 143 ~~l~Dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~---------------~~~~~~~~Di~slG~il~~l~~~g~~p~ 206 (268)
T 3sxs_A 143 VKVSDFGMTRYVLDDQY-VSSVGTKFPVKWSAPEVFH---------------YFKYSSKSDVWAFGILMWEVFSLGKMPY 206 (268)
T ss_dssp EEECCTTCEEECCTTCE-EECCSCCCCGGGCCHHHHH---------------HSEEETTHHHHHHHHHHHHHHTTTCCTT
T ss_pred EEEccCccceecchhhh-hcccCCCcCcccCCHHHHh---------------ccCCchhhhhHHHHHHHHHHHcCCCCCc
Confidence 4444 44544433322 1234566788999999992 2456789999999999999999 99 99
Q ss_pred hHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHH-HhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHHhhh
Q 008820 90 TKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYL-LENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELI 166 (552)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~~~~ 166 (552)
.......+. ...... ...........+.+++.+||+.+|.+||++.++.+.+..+.
T Consensus 207 ~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~ 263 (268)
T 3sxs_A 207 DLYTNSEVV---------------------LKVSQGHRLYRPHLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLR 263 (268)
T ss_dssp TTSCHHHHH---------------------HHHHTTCCCCCCTTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGC
T ss_pred cccChHHHH---------------------HHHHcCCCCCCCCcChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhh
Confidence 654333110 000000 00011112345889999999999999999999999888764
No 328
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=99.38 E-value=8.6e-14 Score=139.11 Aligned_cols=59 Identities=22% Similarity=0.434 Sum_probs=46.1
Q ss_pred hhhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cc
Q 008820 13 VAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QF 89 (552)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf 89 (552)
..|+. |+++.+... .+...||+.|||||++ .+ ..++.++|||||||+||||+||+ ||
T Consensus 234 ~~kl~DfG~a~~~~~~-----~~~~~gt~~y~aPE~~------~~---------~~~~~~~DiwslG~il~elltg~~pf 293 (397)
T 1wak_A 234 KVKIADLGNACWVHKH-----FTEDIQTRQYRSLEVL------IG---------SGYNTPADIWSTACMAFELATGDYLF 293 (397)
T ss_dssp CEEECCGGGCEETTBC-----SCSCCSCGGGCCHHHH------HT---------SCCCTHHHHHHHHHHHHHHHHSSCSC
T ss_pred ceEecccccccccccc-----CccCCCCCcccCChhh------cC---------CCCCcHHHHHHHHHHHHHHhhCCCCC
Confidence 45555 555555433 4567899999999999 22 45678999999999999999999 99
Q ss_pred hH
Q 008820 90 TK 91 (552)
Q Consensus 90 ~~ 91 (552)
..
T Consensus 294 ~~ 295 (397)
T 1wak_A 294 EP 295 (397)
T ss_dssp CC
T ss_pred CC
Confidence 64
No 329
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=99.38 E-value=1.2e-13 Score=131.60 Aligned_cols=99 Identities=13% Similarity=0.246 Sum_probs=69.0
Q ss_pred hccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC--CchHHHhhhhhhccccCCCchhhh
Q 008820 34 DFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE--QFTKELIDYIRCVSTKASDDNIAC 111 (552)
Q Consensus 34 ~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~--pf~~~~~~~~~~~~~~~~~~~~~~ 111 (552)
...||+.|||||++. + ...+++++|||||||+||||++|. ||........
T Consensus 176 ~~~~~~~y~aPE~~~------~--------~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~-------------- 227 (289)
T 4fvq_A 176 ILQERIPWVPPECIE------N--------PKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRK-------------- 227 (289)
T ss_dssp HHHHTTTTSCHHHHH------C--------GGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHH--------------
T ss_pred ccCCcCcccCHHHhC------C--------CCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHH--------------
Confidence 456899999999992 1 144678999999999999999976 5443221100
Q ss_pred hhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHHhhhcC
Q 008820 112 LGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELIIK 168 (552)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~~~~~~ 168 (552)
.. ..............++.+++.+||+.+|.+||++.++.+.+.++..+
T Consensus 228 -------~~-~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p 276 (289)
T 4fvq_A 228 -------LQ-FYEDRHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTP 276 (289)
T ss_dssp -------HH-HHHTTCCCCCCSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC--
T ss_pred -------HH-HhhccCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCC
Confidence 00 00011111222355699999999999999999999999999988744
No 330
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=99.37 E-value=4.4e-14 Score=135.64 Aligned_cols=135 Identities=10% Similarity=0.114 Sum_probs=69.5
Q ss_pred hhhcc--cccccccccchh--hhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhC--
Q 008820 13 VAKVG--CVGSRICDKEVG--LFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIG-- 86 (552)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg-- 86 (552)
.+|+. |+++.+...... .......||+.|||||++.+.... ....+++++|||||||+||||+||
T Consensus 146 ~~kl~DFg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~---------~~~~~~~~~DiwslG~il~el~~g~~ 216 (303)
T 3gxj_A 146 TCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINM---------KHFESFKRADIYAMGLVFWEIARRCS 216 (303)
T ss_dssp CC-BCCCCC-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCT---------TCHHHHHHHHHHC-CCCC-CTGGGBC
T ss_pred CEEEeecCcceeccCCCcccccccCCCCcCccccCHhhhcCcccc---------cccccCcchhHHHHHHHHHHHHhcCC
Confidence 35666 555554443321 113455899999999998211000 011455789999999999999999
Q ss_pred --------C-CchHHHhhhhhhccccCCCchhhhhhhhHHHHHHH--HHHHhhhh-cCccccHHHHHHhhcccCCCCCcc
Q 008820 87 --------E-QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKV--TYLLENKF-GSEFVSLQLMFCQCLNFDPGCRPL 154 (552)
Q Consensus 87 --------~-pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~l~~~~~~~l~~~p~~R~~ 154 (552)
+ ||........ ... .......... +..+.... ......+.+++.+||+.+|.+||+
T Consensus 217 ~~~~~~~~~~p~~~~~~~~~---~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps 284 (303)
T 3gxj_A 217 IGGIHEDYQLPYYDLVPSDP---SVE---------EMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLT 284 (303)
T ss_dssp BTTBC-CCCCTTTTTCC-CC---CCC----------CHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCC
T ss_pred CccccceeeccccccCCCCc---cHH---------HHHHHHHHhhcCCCccccccchhhHHHHHHHHHHHhccCcccCCC
Confidence 5 6643211100 000 0000000000 00000000 001124889999999999999999
Q ss_pred hhhHHHHHHhhhcC
Q 008820 155 LTNVWKCIRELIIK 168 (552)
Q Consensus 155 ~~~~~~~l~~~~~~ 168 (552)
+.++.+.+.++...
T Consensus 285 ~~~i~~~L~~l~~~ 298 (303)
T 3gxj_A 285 ALRIKKTLSQLSQQ 298 (303)
T ss_dssp HHHHHHHHHC-CCC
T ss_pred HHHHHHHHHHhhhh
Confidence 99999998887643
No 331
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=99.37 E-value=1.2e-13 Score=135.78 Aligned_cols=98 Identities=16% Similarity=0.186 Sum_probs=58.6
Q ss_pred hhhccccccccchHHHHHHhhccCceeecccccccc-cccccccchhhhhhhhhhCC-CchHHHhhhhhhccccCCCchh
Q 008820 32 LSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSV-GYGSDVWPVACILLSLLIGE-QFTKELIDYIRCVSTKASDDNI 109 (552)
Q Consensus 32 ~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~-~~~sDv~SlG~~l~~lltg~-pf~~~~~~~~~~~~~~~~~~~~ 109 (552)
.....||+.|||||++ .+ ..+ +.++|||||||+||+|++|+ ||........
T Consensus 174 ~~~~~gt~~y~aPE~~------~~---------~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~------------ 226 (361)
T 3uc3_A 174 PKSTVGTPAYIAPEVL------LR---------QEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRD------------ 226 (361)
T ss_dssp -------CTTSCHHHH------HC---------SSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCC------------
T ss_pred CCCCcCCCCcCChhhh------cC---------CCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHH------------
Confidence 4567899999999999 22 233 34599999999999999999 9976443210
Q ss_pred hhhhhhHHHHHHHHHHHh--hhhcCccccHHHHHHhhcccCCCCCcchhhHHHH
Q 008820 110 ACLGMYMAWMEKVTYLLE--NKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKC 161 (552)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~ 161 (552)
............. +........+.+++.+||+.+|.+||++.++.+.
T Consensus 227 -----~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~h 275 (361)
T 3uc3_A 227 -----YRKTIQRILSVKYSIPDDIRISPECCHLISRIFVADPATRISIPEIKTH 275 (361)
T ss_dssp -----HHHHHHHHHTTCCCCCTTSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred -----HHHHHHHHhcCCCCCCCcCCCCHHHHHHHHHHccCChhHCcCHHHHHhC
Confidence 1111111111110 1111234568999999999999999999887663
No 332
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=99.37 E-value=1.1e-13 Score=134.87 Aligned_cols=117 Identities=15% Similarity=0.225 Sum_probs=80.0
Q ss_pred hhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhh-CC-Cc
Q 008820 14 AKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE-QF 89 (552)
Q Consensus 14 ~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~llt-g~-pf 89 (552)
.|+. |+++.+.............||+.|+|||++. ...++.++|||||||+||||+| |+ ||
T Consensus 196 ~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~---------------~~~~~~~~Di~slG~il~ellt~g~~p~ 260 (334)
T 2pvf_A 196 MKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALF---------------DRVYTHQSDVWSFGVLMWEIFTLGGSPY 260 (334)
T ss_dssp EEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHH---------------HCEECHHHHHHHHHHHHHHHHTTSCCSS
T ss_pred EEEccccccccccccccccccCCCCcccceeChHHhc---------------CCCcChHHHHHHHHHHHHHHHhCCCCCc
Confidence 4555 5555555443222345567899999999992 2456789999999999999999 99 99
Q ss_pred hHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHH-hhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHHhhh
Q 008820 90 TKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLL-ENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELI 166 (552)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~~~~ 166 (552)
.......+. ..+.... ..........+.+++.+||+.+|.+||++.++.+.+.++.
T Consensus 261 ~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~ 317 (334)
T 2pvf_A 261 PGIPVEELF---------------------KLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 317 (334)
T ss_dssp TTCCHHHHH---------------------HHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CcCCHHHHH---------------------HHHhcCCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 764433111 1110000 0111223445899999999999999999999999988875
No 333
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=99.37 E-value=1.3e-13 Score=133.65 Aligned_cols=117 Identities=21% Similarity=0.217 Sum_probs=79.4
Q ss_pred hhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhh-CC-Cc
Q 008820 14 AKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE-QF 89 (552)
Q Consensus 14 ~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~llt-g~-pf 89 (552)
.|+. |+++.+.............||+.|||||++. ...++.++|||||||+||+|+| |+ ||
T Consensus 177 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~---------------~~~~~~~~Di~slG~il~el~~~g~~p~ 241 (322)
T 1p4o_A 177 VKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLK---------------DGVFTTYSDVWSFGVVLWEIATLAEQPY 241 (322)
T ss_dssp EEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHH---------------HCCCCHHHHHHHHHHHHHHHHHTSCCTT
T ss_pred EEECcCccccccccccccccccCCCCCCCccChhhhc---------------cCCCCchhhHHHHHHHHHHHHhcCCCcc
Confidence 4555 5565555443322345667899999999982 2456789999999999999999 78 99
Q ss_pred hHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHH-HhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHHhhh
Q 008820 90 TKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYL-LENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELI 166 (552)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~~~~ 166 (552)
.......+. ..+... ...........+.+++.+||+.+|.+||++.++.+.+...+
T Consensus 242 ~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~ 298 (322)
T 1p4o_A 242 QGLSNEQVL---------------------RFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEM 298 (322)
T ss_dssp TTSCHHHHH---------------------HHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGS
T ss_pred ccCCHHHHH---------------------HHHHcCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhh
Confidence 664333111 000000 00111123345889999999999999999999999888765
No 334
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=99.37 E-value=1.4e-13 Score=132.85 Aligned_cols=125 Identities=17% Similarity=0.219 Sum_probs=68.0
Q ss_pred hhhhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceee--cccccccccccccccchhhhhhhhhhCC
Q 008820 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVE--CEESEFSVGYGSDVWPVACILLSLLIGE 87 (552)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~--~~~~~~~~~~~sDv~SlG~~l~~lltg~ 87 (552)
...|+. |+++.+.............||+.|||||++. +.... .......++.++|||||||+||||++|+
T Consensus 163 ~~~kL~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~ 236 (313)
T 3cek_A 163 GMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIK------DMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 236 (313)
T ss_dssp TEEEECCCSSSCC--------------CCGGGCCHHHHT------TCC----------CCCHHHHHHHHHHHHHHHHHSS
T ss_pred CeEEEeeccccccccCccccccccCCCCCCCcCCHHHHh------hcccccccccccccCCchHHHHHHHHHHHHHHhCC
Confidence 345666 5566655544333456778999999999982 21000 0001245678999999999999999999
Q ss_pred -CchHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHH-HHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHH
Q 008820 88 -QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTY-LLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKC 161 (552)
Q Consensus 88 -pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~ 161 (552)
||...... . ......... ............+.+++.+||+.+|.+||++.++.+.
T Consensus 237 ~pf~~~~~~-~------------------~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 293 (313)
T 3cek_A 237 TPFQQIINQ-I------------------SKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 293 (313)
T ss_dssp CTTTTCCSH-H------------------HHHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred CchhhHHHH-H------------------HHHHHHHhcccccCCcccchHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence 99652211 0 000000000 0000111223458999999999999999998876653
No 335
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=99.37 E-value=2.1e-13 Score=135.82 Aligned_cols=122 Identities=16% Similarity=0.143 Sum_probs=74.8
Q ss_pred hhhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cc
Q 008820 13 VAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QF 89 (552)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf 89 (552)
..|+. |+|+.+...+. .....||+.|||||++ .| ...++.++|||||||+||||++|+ ||
T Consensus 180 ~~kL~DFG~a~~~~~~~~---~~~~~~t~~y~aPE~~------~~--------~~~~~~~~DiwSlG~il~ell~g~~pf 242 (394)
T 4e7w_A 180 VLKLIDFGSAKILIAGEP---NVSYICSRYYRAPELI------FG--------ATNYTTNIDIWSTGCVMAELMQGQPLF 242 (394)
T ss_dssp EEEECCCTTCEECCTTCC---CCSSCSCGGGCCHHHH------TT--------CSSCCTHHHHHHHHHHHHHHHHSSCSS
T ss_pred cEEEeeCCCcccccCCCC---CcccccCcCccCHHHH------cC--------CCCCCcHHHHHHHHHHHHHHHhCCCCC
Confidence 35565 56665544433 4567899999999998 22 234678999999999999999999 99
Q ss_pred hHHHhh-hhh---hccccCCCchhhhhhhhHHHHHHHHHH-------------HhhhhcCccccHHHHHHhhcccCCCCC
Q 008820 90 TKELID-YIR---CVSTKASDDNIACLGMYMAWMEKVTYL-------------LENKFGSEFVSLQLMFCQCLNFDPGCR 152 (552)
Q Consensus 90 ~~~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~l~~~~~~~l~~~p~~R 152 (552)
.+.... .+. ...+.... ..+....+.. .........+++.+++.+||+.+|.+|
T Consensus 243 ~~~~~~~~l~~i~~~~g~p~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R 313 (394)
T 4e7w_A 243 PGESGIDQLVEIIKVLGTPSR---------EQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSAR 313 (394)
T ss_dssp CCSSHHHHHHHHHHHHCCCCH---------HHHHHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGS
T ss_pred CCCCHHHHHHHHHHHhCCCCH---------HHHHhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhC
Confidence 654322 111 00000000 0000000000 000111234468999999999999999
Q ss_pred cchhhHHH
Q 008820 153 PLLTNVWK 160 (552)
Q Consensus 153 ~~~~~~~~ 160 (552)
|++.++.+
T Consensus 314 ~t~~e~l~ 321 (394)
T 4e7w_A 314 LTAIEALC 321 (394)
T ss_dssp CCHHHHHT
T ss_pred CCHHHHhc
Confidence 99887655
No 336
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=99.37 E-value=1.4e-13 Score=139.77 Aligned_cols=118 Identities=17% Similarity=0.178 Sum_probs=81.3
Q ss_pred hhhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhh-CC-C
Q 008820 13 VAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE-Q 88 (552)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~llt-g~-p 88 (552)
.+|+. |+++.+...... ......||+.|||||++. ...++.++|||||||+||||+| |+ |
T Consensus 322 ~~kl~DFG~a~~~~~~~~~-~~~~~~~~~~y~aPE~~~---------------~~~~~~~~DvwslG~~l~el~t~g~~P 385 (454)
T 1qcf_A 322 VCKIADFGLARVIEDNEYT-AREGAKFPIKWTAPEAIN---------------FGSFTIKSDVWSFGILLMEIVTYGRIP 385 (454)
T ss_dssp CEEECSTTGGGGBCCHHHH-TTCSSSSCGGGSCHHHHH---------------HCCCCHHHHHHHHHHHHHHHHTTSCCS
T ss_pred cEEEeeCCCceEcCCCcee-ccCCCcccccccCHHHhc---------------cCCCCcHHHHHhHHHHHHHHHhCCCCC
Confidence 45666 667666554332 345567899999999992 2456789999999999999999 99 9
Q ss_pred chHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHHhhh
Q 008820 89 FTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELI 166 (552)
Q Consensus 89 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~~~~ 166 (552)
|.+.....+. ..+... ...+.......++.+++.+||+.+|.+||++.++.+.+..+.
T Consensus 386 ~~~~~~~~~~-----------------~~i~~~---~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~ 443 (454)
T 1qcf_A 386 YPGMSNPEVI-----------------RALERG---YRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFY 443 (454)
T ss_dssp STTCCHHHHH-----------------HHHHHT---CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSS
T ss_pred CCCCCHHHHH-----------------HHHHcC---CCCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHH
Confidence 9764333111 000000 000111123445899999999999999999999999888765
No 337
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=99.37 E-value=1.1e-13 Score=137.00 Aligned_cols=118 Identities=18% Similarity=0.164 Sum_probs=77.9
Q ss_pred hhhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhh-CC-C
Q 008820 13 VAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE-Q 88 (552)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~llt-g~-p 88 (552)
.+|+. |+++...............+|+.|||||++. ...++.++|||||||+||||+| |+ |
T Consensus 251 ~~kl~DfG~s~~~~~~~~~~~~~~~~~~~~y~aPE~~~---------------~~~~~~~~DvwslG~il~el~t~g~~p 315 (377)
T 3cbl_A 251 VLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALN---------------YGRYSSESDVWSFGILLWETFSLGASP 315 (377)
T ss_dssp CEEECCGGGCEECTTSEEECCSSCCEEEGGGSCHHHHH---------------HCEEEHHHHHHHHHHHHHHHHTTSCCS
T ss_pred cEEECcCCCceecCCCceeecCCCCCCCcCcCCHhHhc---------------cCCCCchhhHHHHHHHHHHHHhCCCCC
Confidence 45666 5665544433221123345688999999992 2456789999999999999998 99 9
Q ss_pred chHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHH-HhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHHhhh
Q 008820 89 FTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYL-LENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELI 166 (552)
Q Consensus 89 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~~~~ 166 (552)
|.......+. ..+... ..+.......++.+++.+||+.+|.+||++.++.+.+..+.
T Consensus 316 ~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~ 373 (377)
T 3cbl_A 316 YPNLSNQQTR---------------------EFVEKGGRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIR 373 (377)
T ss_dssp STTSCHHHHH---------------------HHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCCCHHHHH---------------------HHHHcCCCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHH
Confidence 9764332111 000000 00011123345889999999999999999999999887764
No 338
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.37 E-value=2.7e-09 Score=104.87 Aligned_cols=258 Identities=11% Similarity=-0.030 Sum_probs=165.5
Q ss_pred cEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCCEEEEEc---------CCCcEEEEeCCCCCCCccccccccCCC--ce
Q 008820 273 SIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGD---------SGGGIFVWSFSFPLGHEPLKKWNEEKD--WR 341 (552)
Q Consensus 273 ~I~iwd~~~~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~---------~dg~i~vwd~~~~~~~~~~~~~~~~~~--~~ 341 (552)
+|.++|..+++.+.++.....+ .++++|++..+.++.. .++.|.+||..+.+....+........ ..
T Consensus 48 ~v~v~D~~t~~~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~ 125 (373)
T 2mad_H 48 QQWVLDAGSGSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGP 125 (373)
T ss_pred EEEEEECCCCeEEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCC
Confidence 7899999999998888765444 9999998886666543 468899999986554333322100000 00
Q ss_pred eeeEEEEeeCCCEEEEeeC--CCcEEEEECCCCceeEE-ecCCCCCeEEEEEe---CCEEEEEeCCCcEEEEECCCCcee
Q 008820 342 YSGIHALTTSGRYLYTGSG--DRTIKAWSLLDGTLSCT-MSGHKSAVSTLAVC---NGVLYSGSRDGTIRLWSLSDHSLL 415 (552)
Q Consensus 342 ~~~~~~~~~~~~~l~sgs~--dg~i~iwd~~~~~~~~~-~~~h~~~v~~l~~~---~~~l~s~~~dg~i~iwd~~~~~~~ 415 (552)
...-..++|+|++|+++.. ++.|.++| .+++.+.. +... .. +.+. +..+++.+.||.+.++|. +++..
T Consensus 126 ~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~-~~---~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~ 199 (373)
T 2mad_H 126 YSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSP-TC---YHIHPGAPSTFYLLCAQGGLAKTDH-AGGAA 199 (373)
T ss_pred CccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCC-ce---EEEEeCCCceEEEEcCCCCEEEEEC-CCcEE
Confidence 1123579999999888874 57899999 99998887 6532 22 2232 346778889999999999 88776
Q ss_pred EEEec----CCCCceEEEEEEcCCCCEEEEEECCCcEEEEeCCcc----eeeeec------------ccceEEEEEecCC
Q 008820 416 TVLEE----DSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDKF----MKSMQT------------HKGSVFAVFLEGK 475 (552)
Q Consensus 416 ~~~~~----~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~~~----~~~~~~------------h~~~v~~v~~~~~ 475 (552)
..... ...........+.+++..++..+..+.+.+.|.... ...+.. .......++++++
T Consensus 200 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~ 279 (373)
T 2mad_H 200 GAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSD 279 (373)
T ss_pred EEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCC
Confidence 43321 111111111345555555444457788999986421 122211 1111234556888
Q ss_pred EEEEEeC----------CCeEEEEecCCCeeeeeeccCCCcccCcceEEEEEeC-C--eEEEEe-CCCeEEEEEecCCcc
Q 008820 476 WLFTGGW----------DKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQ-G--KLFVGC-ADRTVKIALCNRQIP 541 (552)
Q Consensus 476 ~l~sgs~----------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~~-~--~l~s~s-~Dg~v~iw~~~~~~~ 541 (552)
.++.+.. ++.|.++|..+.+....+.. ......++|++ + .++++. .++.|.++|.. +.+
T Consensus 280 ~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~------g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~-t~~ 352 (373)
T 2mad_H 280 GIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISL------GHDVDAISVAQDGGPDLYALSAGTEVLHIYDAG-AGD 352 (373)
T ss_pred EEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEEC------CCCcCeEEECCCCCeEEEEEcCCCCeEEEEECC-CCC
Confidence 7777653 35799999999887666543 23467888984 3 477776 58999999987 454
Q ss_pred eeEE
Q 008820 542 EIFS 545 (552)
Q Consensus 542 ~~~~ 545 (552)
.+.+
T Consensus 353 vv~~ 356 (373)
T 2mad_H 353 QDQS 356 (373)
T ss_pred EEee
Confidence 4544
No 339
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=99.37 E-value=1.2e-13 Score=133.17 Aligned_cols=117 Identities=14% Similarity=0.097 Sum_probs=72.3
Q ss_pred hhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhh-CC-Cc
Q 008820 14 AKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE-QF 89 (552)
Q Consensus 14 ~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~llt-g~-pf 89 (552)
.|+. |+++.+.............||+.|+|||++ . ...+++++|||||||+||+|++ |+ ||
T Consensus 186 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~------~---------~~~~~~~~Di~slG~il~el~~~g~~p~ 250 (313)
T 3brb_A 186 VCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESL------A---------DRVYTSKSDVWAFGVTMWEIATRGMTPY 250 (313)
T ss_dssp EEECSCSCC----------------CCGGGSCHHHH------H---------SSCCCHHHHHHHHHHHHHHHHTTSCCSS
T ss_pred EEEeecCcceecccccccCcccccCCCccccCchhh------c---------CCCccchhhhHHHHHHHHHHHhcCCCCC
Confidence 4555 556655544332234566789999999999 2 2456789999999999999999 88 99
Q ss_pred hHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHH-HhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHHhhh
Q 008820 90 TKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYL-LENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELI 166 (552)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~~~~ 166 (552)
.......+. ...... ...........+.+++.+||+.+|.+||++.++.+.+..+.
T Consensus 251 ~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~ 307 (313)
T 3brb_A 251 PGVQNHEMY---------------------DYLLHGHRLKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLL 307 (313)
T ss_dssp TTCCGGGHH---------------------HHHHTTCCCCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ccCCHHHHH---------------------HHHHcCCCCCCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 764433110 000000 00111123345899999999999999999999999888765
No 340
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=99.37 E-value=1.6e-13 Score=132.15 Aligned_cols=117 Identities=21% Similarity=0.380 Sum_probs=68.3
Q ss_pred hhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cch
Q 008820 14 AKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFT 90 (552)
Q Consensus 14 ~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~ 90 (552)
.|+. |+++.+..... ......||+.|+|||++ . ...++.++|||||||+||+|++|+ ||.
T Consensus 175 ~kl~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~------~---------~~~~~~~~Dv~slG~il~~l~~g~~p~~ 237 (310)
T 2wqm_A 175 VKLGDLGLGRFFSSKTT--AAHSLVGTPYYMSPERI------H---------ENGYNFKSDIWSLGCLLYEMAALQSPFY 237 (310)
T ss_dssp EEECCC--------------------CCSSCCHHHH------T---------TCCCCHHHHHHHHHHHHHHHHHSSCTTC
T ss_pred EEEEeccceeeecCCCc--cccccCCCeeEeChHHh------C---------CCCCCchhhHHHHHHHHHHHHhCCCCCc
Confidence 4455 44444443322 24567899999999998 2 255678999999999999999999 997
Q ss_pred HHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHH--HhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHHhhh
Q 008820 91 KELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYL--LENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELI 166 (552)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~~~~ 166 (552)
...... ......+... +.........++.+++.+||+.+|.+||++.++.+.+.++.
T Consensus 238 ~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~ 296 (310)
T 2wqm_A 238 GDKMNL-------------------YSLCKKIEQCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMH 296 (310)
T ss_dssp ---CCH-------------------HHHHHHHHTTCSCCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ccchhH-------------------HHHHHHhhcccCCCCcccccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHH
Confidence 643220 0011111000 00001123445999999999999999999999999888775
No 341
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=99.37 E-value=1.7e-13 Score=135.11 Aligned_cols=126 Identities=13% Similarity=0.165 Sum_probs=74.2
Q ss_pred hhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cch
Q 008820 14 AKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFT 90 (552)
Q Consensus 14 ~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~ 90 (552)
.|+. |+++..... .+...||+.|||||++. + ...++.++|||||||+||||++|+ ||.
T Consensus 167 ~kl~Dfg~a~~~~~~-----~~~~~~t~~y~aPE~~~------~--------~~~~~~~~DiwslG~il~ell~g~~pf~ 227 (367)
T 1cm8_A 167 LKILDFGLARQADSE-----MTGYVVTRWYRAPEVIL------N--------WMRYTQTVDIWSVGCIMAEMITGKTLFK 227 (367)
T ss_dssp EEECCCTTCEECCSS-----CCSSCSCGGGCCTHHHH------T--------TTCCCTTHHHHHHHHHHHHHHHSSCSSC
T ss_pred EEEEeeecccccccc-----cCcCcCCCCcCCHHHHh------C--------CCCCChhhhHHHHHHHHHHHHhCCCCCC
Confidence 4555 556554432 56789999999999982 1 245678999999999999999999 996
Q ss_pred HHHhh-hhhh---ccccCCCchh-hhhhhhHHHHHHHHHHH-------hhhhcCccccHHHHHHhhcccCCCCCcchhhH
Q 008820 91 KELID-YIRC---VSTKASDDNI-ACLGMYMAWMEKVTYLL-------ENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNV 158 (552)
Q Consensus 91 ~~~~~-~~~~---~~~~~~~~~~-~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~ 158 (552)
+.... ++.. ..+. .+..+ .... ...........+ ........+.+.+++.+||+.+|.+||++.++
T Consensus 228 ~~~~~~~l~~i~~~~g~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~ 305 (367)
T 1cm8_A 228 GSDHLDQLKEIMKVTGT-PPAEFVQRLQ-SDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEA 305 (367)
T ss_dssp CSSHHHHHHHHHHHHCC-CCHHHHHTCS-CHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHH
T ss_pred CCCHHHHHHHHHHhcCC-CCHHHHHHhh-hHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHH
Confidence 54322 1110 0010 00000 0000 000000000000 00111234568999999999999999998876
Q ss_pred HH
Q 008820 159 WK 160 (552)
Q Consensus 159 ~~ 160 (552)
.+
T Consensus 306 l~ 307 (367)
T 1cm8_A 306 LA 307 (367)
T ss_dssp HH
T ss_pred hc
Confidence 65
No 342
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=99.36 E-value=2.6e-14 Score=141.73 Aligned_cols=113 Identities=10% Similarity=-0.006 Sum_probs=70.2
Q ss_pred hhhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cc
Q 008820 13 VAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QF 89 (552)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf 89 (552)
.+|+. |+|+..... .....| +.|||||++...... .........+++++|||||||+||||+||+ ||
T Consensus 244 ~~kL~DFG~a~~~~~~-----~~~~~g-~~y~aPE~~~~~~~~----~~~~~~~~~~~~~~DvwSlG~il~elltg~~Pf 313 (377)
T 3byv_A 244 GVFLTGFEHLVRDGAR-----VVSSVS-RGFEPPELEARRATI----SYHRDRRTLMTFSFDAWALGLVIYWIWCADLPI 313 (377)
T ss_dssp CEEECCGGGCEETTCE-----EECCCC-TTCCCHHHHHHHTST----HHHHCCEEECCHHHHHHHHHHHHHHHHHSSCCC
T ss_pred CEEEEechhheecCCc-----ccCCCC-cCccChhhhcccccc----cccccccccCChhhhHHHHHHHHHHHHHCCCCC
Confidence 45666 566654432 567788 999999999432000 000001125678999999999999999999 99
Q ss_pred hHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 90 TKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
.......+. ... .........++.+++.+||+.+|.+||++.++.+
T Consensus 314 ~~~~~~~~~-----------------~~~--------~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~ 359 (377)
T 3byv_A 314 TKDAALGGS-----------------EWI--------FRSCKNIPQPVRALLEGFLRYPKEDRLLPLQAME 359 (377)
T ss_dssp ------CCS-----------------GGG--------GSSCCCCCHHHHHHHHHHTCSSGGGCCCHHHHHT
T ss_pred cccccccch-----------------hhh--------hhhccCCCHHHHHHHHHHcCCCchhCCCHHHHhh
Confidence 775533111 000 0001123345889999999999999999887655
No 343
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=99.36 E-value=2.9e-14 Score=141.07 Aligned_cols=118 Identities=12% Similarity=0.020 Sum_probs=73.0
Q ss_pred hhhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cc
Q 008820 13 VAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QF 89 (552)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf 89 (552)
.+|+. |+|+.+... .....||+.|||||++ .+ ....++.++|||||||+||||+||+ ||
T Consensus 232 ~~kL~DFG~a~~~~~~-----~~~~~~t~~y~aPE~~------~~-------~~~~~~~~~DiwSlG~il~elltg~~Pf 293 (371)
T 3q60_A 232 RLMLGDVSALWKVGTR-----GPASSVPVTYAPREFL------NA-------STATFTHALNAWQLGLSIYRVWCLFLPF 293 (371)
T ss_dssp CEEECCGGGEEETTCE-----EEGGGSCGGGCCHHHH------TC-------SEEECCHHHHHHHHHHHHHHHHHSSCST
T ss_pred CEEEEecceeeecCCC-----ccCccCCcCCcChhhc------cC-------CCCCcCccccHHHHHHHHHHHHhCCCCC
Confidence 35666 566655443 2356788999999999 21 1246789999999999999999999 99
Q ss_pred hHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 90 TKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
................. .. . . .....+........+.+++.+||+.+|.+||++.++.+
T Consensus 294 ~~~~~~~~~~~~~~~~~---~~-~-~-------~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 352 (371)
T 3q60_A 294 GLVTPGIKGSWKRPSLR---VP-G-T-------DSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAME 352 (371)
T ss_dssp TBCCTTCTTCCCBCCTT---SC-C-C-------CSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred CCcCcccccchhhhhhh---hc-c-c-------cccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 77532211000000000 00 0 0 00000111123445899999999999999999876643
No 344
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.36 E-value=2.4e-10 Score=111.53 Aligned_cols=218 Identities=11% Similarity=0.059 Sum_probs=140.4
Q ss_pred CeEEEEEecCCCCEEEEE--------cCCCcEEEEeCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCC---C
Q 008820 294 KVMAVVYVDEDQPLCISG--------DSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGD---R 362 (552)
Q Consensus 294 ~v~~v~~~~~~~~~l~s~--------~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~d---g 362 (552)
.+...++ ++..++++. ..++.|.+||+.++... .+ .......++|+|+.|+.++.+ +
T Consensus 16 ~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~-~l---------~~~~~~~~SpDg~~la~~~~~~~~~ 83 (347)
T 2gop_A 16 YLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNARR-FI---------ENATMPRISPDGKKIAFMRANEEKK 83 (347)
T ss_dssp EEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEE-EE---------ESCEEEEECTTSSEEEEEEEETTTT
T ss_pred EcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCceE-Ec---------ccCCCeEECCCCCEEEEEEeccCCC
Confidence 4555666 455444432 12577999998865422 11 111234889999988877654 2
Q ss_pred --cEEEEECCCCceeEEecCCCCCeEEEEEe-CC-EEEEEeC---------------------------CCcEEEEECCC
Q 008820 363 --TIKAWSLLDGTLSCTMSGHKSAVSTLAVC-NG-VLYSGSR---------------------------DGTIRLWSLSD 411 (552)
Q Consensus 363 --~i~iwd~~~~~~~~~~~~h~~~v~~l~~~-~~-~l~s~~~---------------------------dg~i~iwd~~~ 411 (552)
.|.+||+.+++.......+ . +.++.|+ ++ .|+.++. ...|++||+.+
T Consensus 84 ~~~l~~~~~~~g~~~~l~~~~-~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~ 161 (347)
T 2gop_A 84 VSEIWVADLETLSSKKILEAK-N-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTES 161 (347)
T ss_dssp EEEEEEEETTTTEEEEEEEES-E-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTT
T ss_pred cceEEEEECCCCceEEEEcCC-C-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCC
Confidence 4888899888776555433 3 8999999 44 6766653 25799999998
Q ss_pred CceeEEEecCCCCceEEEEEEcCCCCEEEEEECCC---------cEEEEeCCcceeeeecccceEEEEEecCCEEEEEeC
Q 008820 412 HSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESG---------SIKVWRNDKFMKSMQTHKGSVFAVFLEGKWLFTGGW 482 (552)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg---------~i~iwd~~~~~~~~~~h~~~v~~v~~~~~~l~sgs~ 482 (552)
++.+..+... .+.. ..|+|+| +++++..++ .|+++| ......+..+ ..+..++++|++|+.++.
T Consensus 162 ~~~~~~l~~~---~~~~-~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d-~~~~~~l~~~-~~~~~~spdg~~l~~~~~ 234 (347)
T 2gop_A 162 EEVIEEFEKP---RFSS-GIWHRDK-IVVNVPHREIIPQYFKFWDIYIWE-DGKEEKMFEK-VSFYAVDSDGERILLYGK 234 (347)
T ss_dssp TEEEEEEEEE---TTCE-EEEETTE-EEEEEECCCSSCCSSCCEEEEEEE-TTEEEEEEEE-ESEEEEEECSSCEEEEEC
T ss_pred CeEEeeecCC---Cccc-ccCCCCe-EEEEEecccccccccccccEEEeC-CCceEEeccC-cceeeECCCCCEEEEEEc
Confidence 8774455442 2333 5899999 777776542 455667 4334444445 566667889999888775
Q ss_pred C--------CeEEEEecCCCeeeeeeccCCCcccCcceEE-EEEeCCeEEEEeCCCeEEEEEecCCcc
Q 008820 483 D--------KTVSVQELAGDEFEEDVIPTGAIPCGSVITA-LLYWQGKLFVGCADRTVKIALCNRQIP 541 (552)
Q Consensus 483 d--------g~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~-l~~~~~~l~s~s~Dg~v~iw~~~~~~~ 541 (552)
+ ..|.+|| +++....... ....+.. +.|+++.+++++.++.++|| ++ .+.
T Consensus 235 ~~~~~~~~~~~l~~~d--~~~~~~l~~~-----~~~~~~~~~~~sdg~~~~~~~~~~~~l~-~~-~g~ 293 (347)
T 2gop_A 235 PEKKYMSEHNKLYIYD--GKEVMGILDE-----VDRGVGQAKIKDGKVYFTLFEEGSVNLY-IW-DGE 293 (347)
T ss_dssp CSSSCCCSSCEEEEEC--SSCEEESSTT-----CCSEEEEEEEETTEEEEEEEETTEEEEE-EE-SSS
T ss_pred cccCCccccceEEEEC--CCceEecccc-----CCcccCCccEEcCcEEEEEecCCcEEEE-Ec-CCc
Confidence 4 3688888 4433322211 1345665 88885557788999999999 88 443
No 345
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=99.36 E-value=1.7e-13 Score=130.26 Aligned_cols=93 Identities=15% Similarity=0.181 Sum_probs=65.7
Q ss_pred hhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhhhhhhccccCCCchhh
Q 008820 32 LSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDYIRCVSTKASDDNIA 110 (552)
Q Consensus 32 ~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~~~~~~~~~~~~~~~~ 110 (552)
.....||+.|+|||++ .+ ..+++++|||||||++|+|++|+ ||........
T Consensus 169 ~~~~~~~~~y~aPE~~------~~---------~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~------------- 220 (284)
T 2vgo_A 169 RRTMCGTLDYLPPEMI------EG---------KTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTET------------- 220 (284)
T ss_dssp BCCCCSCGGGCCHHHH------TT---------CCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHH-------------
T ss_pred cccccCCCCcCCHHHh------cc---------CCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHH-------------
Confidence 3457899999999999 22 45678999999999999999999 9965332211
Q ss_pred hhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 111 CLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
...+..............+.+++.+||+.+|.+||++.++.+
T Consensus 221 --------~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~ 262 (284)
T 2vgo_A 221 --------HRRIVNVDLKFPPFLSDGSKDLISKLLRYHPPQRLPLKGVME 262 (284)
T ss_dssp --------HHHHHTTCCCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred --------HHHHhccccCCCCcCCHHHHHHHHHHhhcCHhhCCCHHHHhh
Confidence 000000000111123345889999999999999999988765
No 346
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=99.36 E-value=1.9e-13 Score=129.72 Aligned_cols=116 Identities=16% Similarity=0.178 Sum_probs=78.1
Q ss_pred hhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhh-CC-Cc
Q 008820 14 AKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE-QF 89 (552)
Q Consensus 14 ~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~llt-g~-pf 89 (552)
.|+. |+++.+..... .......||+.|+|||++. ...+++++|||||||++|+|+| |+ ||
T Consensus 159 ~kl~Dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~---------------~~~~~~~~Dv~slG~~l~~l~t~g~~p~ 222 (283)
T 3gen_A 159 VKVSDFGLSRYVLDDEY-TSSVGSKFPVRWSPPEVLM---------------YSKFSSKSDIWAFGVLMWEIYSLGKMPY 222 (283)
T ss_dssp EEECSTTGGGGBCCHHH-HSTTSTTSCGGGCCHHHHH---------------HCCCSHHHHHHHHHHHHHHHHTTTCCTT
T ss_pred EEEcccccccccccccc-ccccCCccCcccCCHHHhc---------------cCCCCchhhHHHHHHHHHHHHhCCCCCc
Confidence 4454 45555544432 2345567889999999992 2456789999999999999998 99 99
Q ss_pred hHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHH-hhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHHhhh
Q 008820 90 TKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLL-ENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELI 166 (552)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~~~~ 166 (552)
.......+. ..+.... ..........+.+++.+||+.+|.+||++.++.+.+..+.
T Consensus 223 ~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~ 279 (283)
T 3gen_A 223 ERFTNSETA---------------------EHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVM 279 (283)
T ss_dssp TTSCHHHHH---------------------HHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred cccChhHHH---------------------HHHhcccCCCCCCcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHh
Confidence 654332110 0000000 0011122345889999999999999999999999888765
No 347
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=99.36 E-value=2.2e-13 Score=132.79 Aligned_cols=142 Identities=14% Similarity=0.125 Sum_probs=76.4
Q ss_pred hhhcc--cccccccccc------hhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhh
Q 008820 13 VAKVG--CVGSRICDKE------VGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLL 84 (552)
Q Consensus 13 ~~~~~--~~~~~~~~~~------~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~ll 84 (552)
.+|+. |+++.+.... .........||+.|||||++. |.. .......+++++|||||||+||||+
T Consensus 158 ~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~--~~~~~~~~~~~~DiwslG~il~ell 229 (336)
T 3g2f_A 158 TCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLE------GAV--NLRDXESALKQVDMYALGLIYWEIF 229 (336)
T ss_dssp CEEECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHT------TCC--CGGGHHHHHHHHHHHHHHHHHHHHH
T ss_pred cEEEeeccceeecccccccCccccccccccCCCccceeCchhhc------CCc--ccccccccccccchHHHHHHHHHHH
Confidence 35555 5565554321 112345678999999999992 200 0000134567899999999999999
Q ss_pred hCC-CchH-HHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHH-hhhhcC-------ccccHHHHHHhhcccCCCCCcc
Q 008820 85 IGE-QFTK-ELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLL-ENKFGS-------EFVSLQLMFCQCLNFDPGCRPL 154 (552)
Q Consensus 85 tg~-pf~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-------~~~~l~~~~~~~l~~~p~~R~~ 154 (552)
||. ||.. ........ ..+. ................... ...... ....+.+++.+||+.+|.+||+
T Consensus 230 ~g~~p~~~~~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps 305 (336)
T 3g2f_A 230 MRCTDLFPGESVPEYQM-AFQT---EVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLT 305 (336)
T ss_dssp TTBGGGSTTSCCCCCCC-TTHH---HHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCC
T ss_pred hcCCcCCCccchhHHHH-hhhc---ccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcc
Confidence 998 6633 22111100 0000 0000000000000000000 000000 1124899999999999999999
Q ss_pred hhhHHHHHHhhh
Q 008820 155 LTNVWKCIRELI 166 (552)
Q Consensus 155 ~~~~~~~l~~~~ 166 (552)
+.++.+.+..++
T Consensus 306 ~~e~l~~L~~ll 317 (336)
T 3g2f_A 306 AQXAEERMAELM 317 (336)
T ss_dssp HHHHHHHHHHHH
T ss_pred hHHHHHHHHHHH
Confidence 999999998876
No 348
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=99.36 E-value=1.3e-13 Score=134.19 Aligned_cols=104 Identities=17% Similarity=0.177 Sum_probs=71.5
Q ss_pred hhhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cc
Q 008820 13 VAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QF 89 (552)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf 89 (552)
.+|+. |+++.+..... .....||+.|||||++ .+ ....++++|||||||+||+|++|+ ||
T Consensus 168 ~~kL~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~------~~--------~~~~~~~~DiwslG~il~el~~g~~pf 230 (335)
T 3dls_A 168 TIKLIDFGSAAYLERGKL---FYTFCGTIEYCAPEVL------MG--------NPYRGPELEMWSLGVTLYTLVFEENPF 230 (335)
T ss_dssp CEEECCCTTCEECCTTCC---BCEECSCGGGCCHHHH------TT--------CCBCSHHHHHHHHHHHHHHHHHSSCSC
T ss_pred cEEEeecccceECCCCCc---eeccCCCccccChhhh------cC--------CCCCCCcccchhHHHHHHHHHhCCCch
Confidence 35555 55655554432 4567899999999999 32 122367899999999999999999 99
Q ss_pred hHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 90 TKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
...... +. .. . ........++.+++.+||+.+|.+||++.++.+
T Consensus 231 ~~~~~~-~~---~~-~----------------------~~~~~~~~~l~~li~~~L~~dP~~Rps~~ell~ 274 (335)
T 3dls_A 231 CELEET-VE---AA-I----------------------HPPYLVSKELMSLVSGLLQPVPERRTTLEKLVT 274 (335)
T ss_dssp SSGGGG-TT---TC-C----------------------CCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred hhHHHH-Hh---hc-c----------------------CCCcccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 652211 00 00 0 000112335889999999999999999888766
No 349
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=99.36 E-value=2.2e-13 Score=134.66 Aligned_cols=61 Identities=20% Similarity=0.436 Sum_probs=37.6
Q ss_pred hhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cch
Q 008820 14 AKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFT 90 (552)
Q Consensus 14 ~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~ 90 (552)
.|+. |+++...... ..+...||+.|||||++ .+ ..++.++|||||||+||||++|+ ||.
T Consensus 166 ~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~------~~---------~~~~~~~DiwslG~il~el~~g~~pf~ 227 (371)
T 2xrw_A 166 LKILDFGLARTAGTSF---MMTPYVVTRYYRAPEVI------LG---------MGYKENVDIWSVGCIMGEMIKGGVLFP 227 (371)
T ss_dssp EEECCCCC-------------------CTTCCHHHH------TT---------CCCCTTHHHHHHHHHHHHHHHSSCSSC
T ss_pred EEEEEeeccccccccc---ccCCceecCCccCHHHh------cC---------CCCCchHhHHHHHHHHHHHHhCCCCCC
Confidence 4555 5555544332 25678999999999999 32 45778999999999999999999 996
Q ss_pred HH
Q 008820 91 KE 92 (552)
Q Consensus 91 ~~ 92 (552)
+.
T Consensus 228 ~~ 229 (371)
T 2xrw_A 228 GT 229 (371)
T ss_dssp CS
T ss_pred CC
Confidence 54
No 350
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=99.36 E-value=3.1e-13 Score=133.23 Aligned_cols=132 Identities=16% Similarity=0.229 Sum_probs=75.1
Q ss_pred hhcc--cccccccccch-hhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cc
Q 008820 14 AKVG--CVGSRICDKEV-GLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QF 89 (552)
Q Consensus 14 ~~~~--~~~~~~~~~~~-~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf 89 (552)
.|+. |+++....... ....+...||+.|||||++. + ...++.++|||||||+||+|++|+ ||
T Consensus 167 ~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~------~--------~~~~~~~~DiwslG~il~ell~g~~pf 232 (364)
T 3qyz_A 167 LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML------N--------SKGYTKSIDIWSVGCILAEMLSNRPIF 232 (364)
T ss_dssp EEECCCTTCEECCGGGCBCCTTCCCCSCGGGCCHHHHH------T--------BCSCSTHHHHHHHHHHHHHHHHSSCSS
T ss_pred EEEEeCcceEecCCCCCccccccccccccCCCCCHHhc------C--------CCCCCcchhHHHHHHHHHHHHHCCCCC
Confidence 4555 55554443322 12356779999999999982 1 234678999999999999999999 99
Q ss_pred hHHHhhhh-hh---ccccCCCchhhhhhhhHHHHHHHHHHH-------hhhhcCccccHHHHHHhhcccCCCCCcchhhH
Q 008820 90 TKELIDYI-RC---VSTKASDDNIACLGMYMAWMEKVTYLL-------ENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNV 158 (552)
Q Consensus 90 ~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~ 158 (552)
.+...... .. ..+...+..|....... ........+ .........++.+++.+||+.+|.+||++.++
T Consensus 233 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~ 311 (364)
T 3qyz_A 233 PGKHYLDQLNHILGILGSPSQEDLNCIINLK-ARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 311 (364)
T ss_dssp CCSSGGGHHHHHHHHHCSCCHHHHHTCCCHH-HHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHH
T ss_pred CCCChHHHHHHHHHHhCCCCHHHHHHhhhhh-HHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHH
Confidence 65432211 10 00111110110000000 000000000 00111234458999999999999999998876
Q ss_pred HH
Q 008820 159 WK 160 (552)
Q Consensus 159 ~~ 160 (552)
.+
T Consensus 312 l~ 313 (364)
T 3qyz_A 312 LA 313 (364)
T ss_dssp HT
T ss_pred hc
Confidence 55
No 351
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=99.36 E-value=2.9e-13 Score=133.38 Aligned_cols=123 Identities=15% Similarity=0.215 Sum_probs=74.9
Q ss_pred hhhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cc
Q 008820 13 VAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QF 89 (552)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf 89 (552)
.+|+. |+++.+..... .....||+.|||||++ .+ ...++.++|||||||+||||+||+ ||
T Consensus 170 ~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~------~~--------~~~~~~~~Di~slG~il~ell~g~~pf 232 (360)
T 3e3p_A 170 TLKLCDFGSAKKLSPSEP---NVAYICSRYYRAPELI------FG--------NQHYTTAVDIWSVGCIFAEMMLGEPIF 232 (360)
T ss_dssp EEEECCCTTCBCCCTTSC---CCSTTSCGGGCCHHHH------TT--------CSSCCTHHHHHHHHHHHHHHHHSSCSS
T ss_pred cEEEeeCCCceecCCCCC---cccccCCcceeCHHHH------cC--------CCCCCcHHHHHHHHHHHHHHHhCCCCc
Confidence 45666 56666655433 4567899999999998 22 234678999999999999999999 99
Q ss_pred hHHHhhhh-hhc-cccCCCchhhhhhhhHHHHHHH-----------------HHHHhhhhcCccccHHHHHHhhcccCCC
Q 008820 90 TKELIDYI-RCV-STKASDDNIACLGMYMAWMEKV-----------------TYLLENKFGSEFVSLQLMFCQCLNFDPG 150 (552)
Q Consensus 90 ~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~l~~~~~~~l~~~p~ 150 (552)
.......+ ..+ .....+ ........ .............++.+++.+||+.+|.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~ 304 (360)
T 3e3p_A 233 RGDNSAGQLHEIVRVLGCP--------SREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPE 304 (360)
T ss_dssp CCSSHHHHHHHHHHHHCCC--------CHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGG
T ss_pred CCCChHHHHHHHHHHcCCC--------CHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCcc
Confidence 65432211 100 000000 00000000 0000000111234588999999999999
Q ss_pred CCcchhhHHH
Q 008820 151 CRPLLTNVWK 160 (552)
Q Consensus 151 ~R~~~~~~~~ 160 (552)
+||++.++.+
T Consensus 305 ~Rpt~~e~l~ 314 (360)
T 3e3p_A 305 ERMKPYEALC 314 (360)
T ss_dssp GSCCHHHHTT
T ss_pred ccCCHHHHhc
Confidence 9999887654
No 352
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=99.36 E-value=2.3e-13 Score=131.90 Aligned_cols=131 Identities=12% Similarity=0.115 Sum_probs=69.1
Q ss_pred hhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cch
Q 008820 14 AKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFT 90 (552)
Q Consensus 14 ~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~ 90 (552)
+|+. |+++....... ......||+.|||||++ .| ...++.++|||||||+||+|++|+ ||.
T Consensus 139 ~kl~Dfg~a~~~~~~~~--~~~~~~~t~~y~aPE~~------~~--------~~~~~~~~DiwslG~il~~l~~g~~pf~ 202 (324)
T 3mtl_A 139 LKLADFGLARAKSIPTK--TYDNEVVTLWYRPPDIL------LG--------STDYSTQIDMWGVGCIFYEMATGRPLFP 202 (324)
T ss_dssp EEECSSSEEECC--------------CGGGCCHHHH------TT--------CCCCCTHHHHHHHHHHHHHHHHSSCSCC
T ss_pred EEEccCcccccccCCcc--ccccccCcccccChhhh------cC--------CCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 4555 44444433322 25667899999999998 22 244678999999999999999999 996
Q ss_pred HHHhhhh----hhccccCCCchhhhhhhhHHHHHHH-----HHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 91 KELIDYI----RCVSTKASDDNIACLGMYMAWMEKV-----TYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 91 ~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
+...... ........+..|............. .............++.+++.+||+.+|.+||++.++.+
T Consensus 203 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 281 (324)
T 3mtl_A 203 GSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMK 281 (324)
T ss_dssp CSSHHHHHHHHHHHHCCCCTTTSTTGGGCHHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred CCCHHHHHHHHHHHhCCCChHhchhhhcchhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhc
Confidence 5433211 1111111222221100000000000 00000111223445889999999999999999887655
No 353
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=99.36 E-value=1.3e-13 Score=131.27 Aligned_cols=118 Identities=15% Similarity=0.089 Sum_probs=78.7
Q ss_pred hhcc--cccccccccch-hhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhh-CC-C
Q 008820 14 AKVG--CVGSRICDKEV-GLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE-Q 88 (552)
Q Consensus 14 ~~~~--~~~~~~~~~~~-~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~llt-g~-p 88 (552)
.|+. |+++.+..... ........||+.|+|||++. ...+++++|||||||++|||+| |+ |
T Consensus 149 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~---------------~~~~~~~~Di~slG~il~ellt~g~~p 213 (287)
T 1u59_A 149 AKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECIN---------------FRKFSSRSDVWSYGVTMWEALSYGQKP 213 (287)
T ss_dssp EEECCCTTCEECTTCSCEECCCCSSCCCGGGCCHHHHH---------------HCEECHHHHHHHHHHHHHHHHTTSCCT
T ss_pred EEECcccceeeeccCcceeeccccccccccccCHHHhc---------------cCCCCchhhHHHHHHHHHHHHcCCCCC
Confidence 4555 45555533322 11234566899999999982 2456789999999999999999 99 9
Q ss_pred chHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHH-HhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHHhhhc
Q 008820 89 FTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYL-LENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELII 167 (552)
Q Consensus 89 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~~~~~ 167 (552)
|.......+. ..+... ...........+.+++.+||+.+|.+||++.++.+.+..++.
T Consensus 214 ~~~~~~~~~~---------------------~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~ 272 (287)
T 1u59_A 214 YKKMKGPEVM---------------------AFIEQGKRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYY 272 (287)
T ss_dssp TTTCCTHHHH---------------------HHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred cccCCHHHHH---------------------HHHhcCCcCCCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 9654322110 000000 001112234469999999999999999999999998888763
No 354
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=99.36 E-value=1.6e-13 Score=134.01 Aligned_cols=45 Identities=27% Similarity=0.587 Sum_probs=39.1
Q ss_pred hhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchH
Q 008820 32 LSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTK 91 (552)
Q Consensus 32 ~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~ 91 (552)
.+...||+.|||||++ .+ ..+++++|||||||+||||++|+ ||..
T Consensus 191 ~~~~~gt~~y~aPE~~------~~---------~~~~~~~Di~slG~il~el~~g~~pf~~ 236 (339)
T 1z57_A 191 HSTLVSTRHYRAPEVI------LA---------LGWSQPCDVWSIGCILIEYYLGFTVFPT 236 (339)
T ss_dssp CCSSCSCGGGCCHHHH------TT---------SCCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred cccccCCccccChHHh------hC---------CCCCcchhhHHHHHHHHHHHhCCCCCCC
Confidence 4567899999999999 32 45778999999999999999999 9954
No 355
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=99.36 E-value=9.5e-14 Score=134.54 Aligned_cols=116 Identities=14% Similarity=0.220 Sum_probs=74.3
Q ss_pred hhhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cc
Q 008820 13 VAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QF 89 (552)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf 89 (552)
..|+. |+++.+.... ......||+.|+|||++... ....++.++|||||||+||+|++|+ ||
T Consensus 155 ~~kl~Dfg~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~------------~~~~~~~~~Di~slG~il~~l~~g~~pf 219 (322)
T 2ycf_A 155 LIKITDFGHSKILGETS---LMRTLCGTPTYLAPEVLVSV------------GTAGYNRAVDCWSLGVILFICLSGYPPF 219 (322)
T ss_dssp CEEECCCTTCEECCCCH---HHHHHHSCCTTCCHHHHHHT------------TTTTCTTHHHHHHHHHHHHHHHHSSCSS
T ss_pred eEEEccCccceeccccc---ccccccCCcCccCchhhccC------------CCCCCCchhhHHHHHHHHHHHHhCCCCC
Confidence 35565 5565554443 25677899999999998321 1245678999999999999999999 99
Q ss_pred hHHHhh-hhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 90 TKELID-YIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 90 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
...... .+. ..+..................+.+++.+||+.+|.+||++.++.+
T Consensus 220 ~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~ 274 (322)
T 2ycf_A 220 SEHRTQVSLK-----------------DQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR 274 (322)
T ss_dssp CSTTCSSCHH-----------------HHHHHTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred cccchHHHHH-----------------HHHHhCccccCchhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence 653321 000 000000000001111223445899999999999999999887654
No 356
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=99.36 E-value=2.5e-13 Score=133.78 Aligned_cols=127 Identities=15% Similarity=0.209 Sum_probs=65.5
Q ss_pred hhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cch
Q 008820 14 AKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFT 90 (552)
Q Consensus 14 ~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~ 90 (552)
.|+. |+++..... .+...||+.|+|||++ .+ ...++.++|||||||+||||++|+ ||.
T Consensus 171 ~kL~DFG~a~~~~~~-----~~~~~~t~~y~aPE~~------~~--------~~~~~~~~DiwslG~il~ell~g~~pf~ 231 (367)
T 2fst_X 171 LKILDFGLARHTADE-----MTGYVATRWYRAPEIM------LN--------WMHYNQTVDIWSVGCIMAELLTGRTLFP 231 (367)
T ss_dssp EEECC--------------------CCCTTCCHHHH------TT--------CCSCCTTHHHHHHHHHHHHHHHSSCSCC
T ss_pred EEEeecccccccccc-----CCCcCcCcCccChHHH------cC--------CcCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence 4455 555554433 5678999999999998 22 245678999999999999999999 996
Q ss_pred HHHhh-hhh---hccccCCCchhhhhhhhHHHHHHHHHHH-------hhhhcCccccHHHHHHhhcccCCCCCcchhhHH
Q 008820 91 KELID-YIR---CVSTKASDDNIACLGMYMAWMEKVTYLL-------ENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVW 159 (552)
Q Consensus 91 ~~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~ 159 (552)
+.... .+. ...+...+.-+.... ...........+ ........+.+.+++.+||+.+|.+||++.++.
T Consensus 232 ~~~~~~~l~~i~~~~g~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L 310 (367)
T 2fst_X 232 GTDHIDQLKLILRLVGTPGAELLKKIS-SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 310 (367)
T ss_dssp CSSHHHHHHHHHHHHCSCCHHHHTTCC-CHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHH
T ss_pred CCCHHHHHHHHHHHhCCCCHHHHHHhh-hHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHh
Confidence 53322 111 000100000000000 000000000000 001112344588999999999999999988765
Q ss_pred H
Q 008820 160 K 160 (552)
Q Consensus 160 ~ 160 (552)
+
T Consensus 311 ~ 311 (367)
T 2fst_X 311 A 311 (367)
T ss_dssp T
T ss_pred c
Confidence 5
No 357
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=99.35 E-value=1.4e-13 Score=135.05 Aligned_cols=128 Identities=13% Similarity=0.091 Sum_probs=74.1
Q ss_pred hhhcc--cccccccccch--hhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-
Q 008820 13 VAKVG--CVGSRICDKEV--GLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE- 87 (552)
Q Consensus 13 ~~~~~--~~~~~~~~~~~--~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~- 87 (552)
.+|+. |+++.+..... ........||+.|||||++ .| ...+++++|||||||+||||+||+
T Consensus 162 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~------~~--------~~~~~~~~DiwslG~il~ell~g~~ 227 (351)
T 3mi9_A 162 VLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELL------LG--------ERDYGPPIDLWGAGCIMAEMWTRSP 227 (351)
T ss_dssp CEEECCCTTCEECCCCSSSSCCCCCSSCSCGGGCCHHHH------TT--------CCSCCTHHHHHHHHHHHHHHHHSSC
T ss_pred CEEEccchhcccccccccccccccCCcccccCccCchhh------cC--------CCCCCcHhHHHHHHHHHHHHHhCCC
Confidence 35555 55555432211 1224667899999999998 22 234678999999999999999999
Q ss_pred CchHHHhhhh----hhccccCCCchhhhhhh-------------hHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCC
Q 008820 88 QFTKELIDYI----RCVSTKASDDNIACLGM-------------YMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPG 150 (552)
Q Consensus 88 pf~~~~~~~~----~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~ 150 (552)
||.+.....+ ........+..|..... ........... ...+.+.+++.+||+.+|.
T Consensus 228 pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~li~~~L~~dP~ 301 (351)
T 3mi9_A 228 IMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAY------VRDPYALDLIDKLLVLDPA 301 (351)
T ss_dssp SCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHH------HCCHHHHHHHHHHSCSSGG
T ss_pred CCCCCChHHHHHHHHHHhCCCChhhccccccchhhcccccccccccCHHHHhhhc------cCChHHHHHHHHHhcCChh
Confidence 9965432211 11111111111110000 00000100000 0123488999999999999
Q ss_pred CCcchhhHHH
Q 008820 151 CRPLLTNVWK 160 (552)
Q Consensus 151 ~R~~~~~~~~ 160 (552)
+||++.++.+
T Consensus 302 ~R~t~~e~l~ 311 (351)
T 3mi9_A 302 QRIDSDDALN 311 (351)
T ss_dssp GSCCHHHHHT
T ss_pred hCCCHHHHhC
Confidence 9999887665
No 358
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=99.35 E-value=1.8e-13 Score=133.98 Aligned_cols=132 Identities=17% Similarity=0.195 Sum_probs=75.1
Q ss_pred hhhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cc
Q 008820 13 VAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QF 89 (552)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf 89 (552)
..|++ |+++.+..... ..+...||+.|||||++ .| ...++.++|||||||+||||++|. ||
T Consensus 150 ~~kl~Dfg~a~~~~~~~~--~~~~~~~t~~y~aPE~~------~~--------~~~~~~~~DiwslG~il~ell~g~~~~ 213 (346)
T 1ua2_A 150 VLKLADFGLAKSFGSPNR--AYTHQVVTRWYRAPELL------FG--------ARMYGVGVDMWAVGCILAELLLRVPFL 213 (346)
T ss_dssp CEEECCCGGGSTTTSCCC--CCCCSCCCCTTCCHHHH------TT--------CSCCCHHHHHHHHHHHHHHHHHSSCSS
T ss_pred CEEEEecccceeccCCcc--cCCcccccccccCchHh------hC--------CCCCCchhhhHhHHHHHHHHHHCCCCC
Confidence 34565 55665544332 25677899999999998 22 233678999999999999999999 88
Q ss_pred hHHHhhhh-h---hccccCCCchhhhh-hhhHHH-HHHHHHHH-hhhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 90 TKELIDYI-R---CVSTKASDDNIACL-GMYMAW-MEKVTYLL-ENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 90 ~~~~~~~~-~---~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~-~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
.+...... . .......+..|... ..+... ....+..+ ..........+.+++.+||+.+|.+||++.++.+
T Consensus 214 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 291 (346)
T 1ua2_A 214 PGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALK 291 (346)
T ss_dssp CCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred CCCCHHHHHHHHHHHcCCCChhhhhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhc
Confidence 55332211 1 00011111111000 000000 00000000 0011223345899999999999999999887665
No 359
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=99.35 E-value=2.5e-13 Score=137.80 Aligned_cols=117 Identities=21% Similarity=0.207 Sum_probs=74.0
Q ss_pred hhhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhh-CC-C
Q 008820 13 VAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE-Q 88 (552)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~llt-g~-p 88 (552)
.+|+. |+++.+...... ......||+.|||||++. ...++.++|||||||+||||+| |+ |
T Consensus 318 ~~kl~DfG~a~~~~~~~~~-~~~~~~~~~~y~aPE~~~---------------~~~~~~~sDvwslG~~l~el~t~g~~P 381 (452)
T 1fmk_A 318 VCKVADFGLARLIEDNEYT-ARQGAKFPIKWTAPEAAL---------------YGRFTIKSDVWSFGILLTELTTKGRVP 381 (452)
T ss_dssp CEEECCCCTTC---------------CCGGGSCHHHHH---------------HCCCCHHHHHHHHHHHHHHHHTTTCCS
T ss_pred CEEECCCccceecCCCcee-cccCCcccccccCHhHHh---------------cCCCCccccHHhHHHHHHHHHhCCCCC
Confidence 45666 667666544322 245667899999999982 2456789999999999999999 89 9
Q ss_pred chHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHH-HhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHHhhh
Q 008820 89 FTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYL-LENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELI 166 (552)
Q Consensus 89 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~~~~ 166 (552)
|.+.....+. ..+... ..+........+.+++.+||+.+|.+||++.++.+.+..+.
T Consensus 382 ~~~~~~~~~~---------------------~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~ 439 (452)
T 1fmk_A 382 YPGMVNREVL---------------------DQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF 439 (452)
T ss_dssp STTCCHHHHH---------------------HHHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTT
T ss_pred CCCCCHHHHH---------------------HHHHcCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHh
Confidence 9764332110 000000 00011123445899999999999999999999999888765
No 360
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=99.35 E-value=2.1e-13 Score=130.11 Aligned_cols=117 Identities=14% Similarity=0.136 Sum_probs=76.1
Q ss_pred hhcc--cccccccccchh-hhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhh-CC-C
Q 008820 14 AKVG--CVGSRICDKEVG-LFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE-Q 88 (552)
Q Consensus 14 ~~~~--~~~~~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~llt-g~-p 88 (552)
.|+. |+++.+...... .......||+.|+|||++. ...+++++|||||||+||+|+| |+ |
T Consensus 156 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~---------------~~~~~~~~Di~slG~il~~l~~~g~~p 220 (291)
T 1xbb_A 156 AKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECIN---------------YYKFSSKSDVWSFGVLMWEAFSYGQKP 220 (291)
T ss_dssp EEECCCTTCEECCTTCSEEEC----CCCGGGCCHHHHH---------------HCEEEHHHHHHHHHHHHHHHHTTTCCS
T ss_pred EEEccCCcceeeccCCCcccccccCCCCceeeChHHhc---------------cCCCChhhhHHHHHHHHHHHHhcCCCC
Confidence 4555 455554433221 1234456789999999992 2446689999999999999999 99 9
Q ss_pred chHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHH-HhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHHhhh
Q 008820 89 FTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYL-LENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELI 166 (552)
Q Consensus 89 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~~~~ 166 (552)
|.......+. ..+... ...........+.+++.+||+.+|.+||++.++.+.+..++
T Consensus 221 ~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~ 278 (291)
T 1xbb_A 221 YRGMKGSEVT---------------------AMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYY 278 (291)
T ss_dssp STTCCHHHHH---------------------HHHHTTCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHH
T ss_pred CCCCCHHHHH---------------------HHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 9764333110 000000 00111223445999999999999999999999999988875
No 361
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.35 E-value=2.7e-10 Score=107.17 Aligned_cols=236 Identities=13% Similarity=0.083 Sum_probs=161.8
Q ss_pred CCEEEEEcCCCcEEEEeCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCceeEEecCCC-C
Q 008820 305 QPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHK-S 383 (552)
Q Consensus 305 ~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~-~ 383 (552)
..++++++.|+.|.+||.++++....+..... .......+.++|++++ +.++.|+.||. +++.++.+..+. .
T Consensus 5 ~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~----~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~ 77 (276)
T 3no2_A 5 QHLLVGGSGWNKIAIINKDTKEIVWEYPLEKG----WECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAAPAGC 77 (276)
T ss_dssp CEEEEECTTCSEEEEEETTTTEEEEEEECCTT----CCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEECCTTC
T ss_pred CcEEEeeCCCCEEEEEECCCCeEEEEeCCCcc----CCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCCCCc
Confidence 35889999999999999987765544443210 0112346788999888 45678999998 899999998653 4
Q ss_pred CeEEEEEe-C-CEEEEEeC-CCcEEEEECCCCceeEEEecCCC-----CceEEEEEEcCCCCEEEEEECCCcEEEEeC-C
Q 008820 384 AVSTLAVC-N-GVLYSGSR-DGTIRLWSLSDHSLLTVLEEDSS-----GAVSSVLSLTAVQHTLVVSHESGSIKVWRN-D 454 (552)
Q Consensus 384 ~v~~l~~~-~-~~l~s~~~-dg~i~iwd~~~~~~~~~~~~~~~-----~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~-~ 454 (552)
.+.++.+. + +.+++.+. ++.|..+|. +++.+..+..... ..... +...++|+++++...++.|..||. +
T Consensus 78 ~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~-v~~~~~G~~lv~~~~~~~v~~~d~~G 155 (276)
T 3no2_A 78 EMQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQ-INKNKKGNYLVPLFATSEVREIAPNG 155 (276)
T ss_dssp EEEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSC-CEECTTSCEEEEETTTTEEEEECTTS
T ss_pred cccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccC-ceECCCCCEEEEecCCCEEEEECCCC
Confidence 67888887 3 47777776 788888885 7888877764211 01112 467899999999999999999995 4
Q ss_pred cceeeeecccceEEEEE--ecCCEEEEEeCCCeEEEEecCCCeeeeeeccCCCc-ccCcceEEEEEe-CCeEEEEeCCC-
Q 008820 455 KFMKSMQTHKGSVFAVF--LEGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAI-PCGSVITALLYW-QGKLFVGCADR- 529 (552)
Q Consensus 455 ~~~~~~~~h~~~v~~v~--~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~-~~~~~v~~l~~~-~~~l~s~s~Dg- 529 (552)
+.+..+..+.. ..++. ++|+.+++++.++.|..+|..+++....+...... .....+..+... ++.++.++.+|
T Consensus 156 ~~~w~~~~~~~-~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~~g~ 234 (276)
T 3no2_A 156 QLLNSVKLSGT-PFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNWQGH 234 (276)
T ss_dssp CEEEEEECSSC-CCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEECTT
T ss_pred CEEEEEECCCC-ccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEeccCc
Confidence 55555554322 22333 48899999998889999999988887766532110 012235666665 45566555433
Q ss_pred --------eEEEEEecCCcceeEEEeccc
Q 008820 530 --------TVKIALCNRQIPEIFSLLLHI 550 (552)
Q Consensus 530 --------~v~iw~~~~~~~~~~~~~gh~ 550 (552)
..++++++++++.+.++..+.
T Consensus 235 ~~~~~~~~~~~~~~~~~~g~~~W~~~~~~ 263 (276)
T 3no2_A 235 DREAGKGKHPQLVEIDSEGKVVWQLNDKV 263 (276)
T ss_dssp CTTGGGSCCCSEEEECTTSBEEEEECCTT
T ss_pred cccccccCCceEEEECCCCCEEEEecCcc
Confidence 457888887888887776654
No 362
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=99.35 E-value=2.4e-13 Score=134.30 Aligned_cols=127 Identities=15% Similarity=0.144 Sum_probs=70.2
Q ss_pred hhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cch
Q 008820 14 AKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFT 90 (552)
Q Consensus 14 ~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~ 90 (552)
+|+. |+++..... .+...||+.|||||++ .+ ...++.++|||||||+||+|++|+ ||.
T Consensus 183 ~kL~Dfg~a~~~~~~-----~~~~~~t~~y~aPE~~------~~--------~~~~~~~~DiwslG~il~el~~g~~pf~ 243 (371)
T 4exu_A 183 LKILDFGLARHADAE-----MTGYVVTRWYRAPEVI------LS--------WMHYNQTVDIWSVGCIMAEMLTGKTLFK 243 (371)
T ss_dssp EEECSTTCC-------------CTTCCCTTSCHHHH------SC--------CSCCCTTHHHHHHHHHHHHHHHSSCSCC
T ss_pred EEEEecCcccccccC-----cCCcccCccccCHHHh------cC--------CCCCCcHHhHHHHHHHHHHHHhCCCCCC
Confidence 4555 455544333 5678899999999998 22 245678999999999999999999 996
Q ss_pred HHHhhhh----hhccccCCCchhhhhhhhHHHHHHHHHHH-------hhhhcCccccHHHHHHhhcccCCCCCcchhhHH
Q 008820 91 KELIDYI----RCVSTKASDDNIACLGMYMAWMEKVTYLL-------ENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVW 159 (552)
Q Consensus 91 ~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~ 159 (552)
+...... ...... .+..+................+ ..........+.+++.+||+.+|.+||++.++.
T Consensus 244 ~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell 322 (371)
T 4exu_A 244 GKDYLDQLTQILKVTGV-PGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQAL 322 (371)
T ss_dssp CSSHHHHHHHHHHHHCC-CCHHHHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHH
T ss_pred CCChHHHHHHHHHHhCC-CcHHHHHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHh
Confidence 5332211 100000 0000100000000000000000 001112345699999999999999999988765
Q ss_pred H
Q 008820 160 K 160 (552)
Q Consensus 160 ~ 160 (552)
+
T Consensus 323 ~ 323 (371)
T 4exu_A 323 T 323 (371)
T ss_dssp T
T ss_pred c
Confidence 4
No 363
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=99.35 E-value=1.4e-13 Score=135.82 Aligned_cols=120 Identities=19% Similarity=0.170 Sum_probs=69.3
Q ss_pred hhhcc--cccccccccchh-hhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhh-CC-
Q 008820 13 VAKVG--CVGSRICDKEVG-LFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE- 87 (552)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~llt-g~- 87 (552)
.+|+. |+++.+...... .......||+.|||||++. ...+++++|||||||+||||++ |+
T Consensus 185 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~---------------~~~~~~~~Dv~SlG~il~ellt~g~~ 249 (373)
T 2qol_A 185 VCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIA---------------YRKFTSASDVWSYGIVLWEVMSYGER 249 (373)
T ss_dssp CEEECCC----------------------CTTSCHHHHH---------------HCCCCHHHHHHHHHHHHHHHHTTC-C
T ss_pred CEEECcCccccccccCCccceeccCCCcCCCccChhhhc---------------cCCcCchhcHHHHHHHHHHHHhCCCC
Confidence 45666 556655543221 1133445688999999992 2456789999999999999998 99
Q ss_pred CchHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHH-HhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHHhhh
Q 008820 88 QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYL-LENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELI 166 (552)
Q Consensus 88 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~~~~ 166 (552)
||.......+. ..+... ..+........+.+++.+||+.+|.+||++.++.+.+..+.
T Consensus 250 P~~~~~~~~~~---------------------~~i~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~ 308 (373)
T 2qol_A 250 PYWEMSNQDVI---------------------KAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 308 (373)
T ss_dssp TTTTCCHHHHH---------------------HHHHTTEECCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCCCCHHHHH---------------------HHHHcCCCCCCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHH
Confidence 99653322110 000000 00111123445899999999999999999999999998876
Q ss_pred cC
Q 008820 167 IK 168 (552)
Q Consensus 167 ~~ 168 (552)
..
T Consensus 309 ~~ 310 (373)
T 2qol_A 309 RN 310 (373)
T ss_dssp HC
T ss_pred hC
Confidence 44
No 364
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=99.35 E-value=1.9e-13 Score=132.22 Aligned_cols=110 Identities=17% Similarity=0.170 Sum_probs=72.5
Q ss_pred hhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhhhhhhccccCCCchhh
Q 008820 32 LSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDYIRCVSTKASDDNIA 110 (552)
Q Consensus 32 ~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~~~~~~~~~~~~~~~~ 110 (552)
.....||+.|+|||++ .+...........+++++|||||||++|||++|+ ||.......+.
T Consensus 191 ~~~~~g~~~y~aPE~~------~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~------------ 252 (319)
T 2y4i_B 191 LRIQNGWLCHLAPEII------RQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAII------------ 252 (319)
T ss_dssp CBCCSGGGGTSCHHHH------SCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHHH------------
T ss_pred cccCCCcccccChHHh------hhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH------------
Confidence 4456799999999999 3321111112345678999999999999999999 99764333110
Q ss_pred hhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHHhhh
Q 008820 111 CLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELI 166 (552)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~~~~ 166 (552)
...... ..+.........++.+++.+||+.+|.+||++.++.+.+..+.
T Consensus 253 -----~~~~~~--~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~ 301 (319)
T 2y4i_B 253 -----WQMGTG--MKPNLSQIGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLP 301 (319)
T ss_dssp -----HHHHTT--CCCCCCCSSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC-
T ss_pred -----HHhccC--CCCCCCcCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHH
Confidence 000000 0000001123446999999999999999999999999888765
No 365
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.35 E-value=1.5e-09 Score=116.80 Aligned_cols=234 Identities=8% Similarity=-0.032 Sum_probs=150.7
Q ss_pred CCCCeEEEEEecCCCCEEEEEcCCC----cEEEEeCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCc---
Q 008820 291 HDHKVMAVVYVDEDQPLCISGDSGG----GIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRT--- 363 (552)
Q Consensus 291 h~~~v~~v~~~~~~~~~l~s~~~dg----~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~--- 363 (552)
|...+..++|+|++..++++.+.+| .|++||+.+++....... . ......+++|||+.|+.++.++.
T Consensus 123 ~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~--~----~~~~~~~wspDg~~l~~~~~~~~~~~ 196 (710)
T 2xdw_A 123 GTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLE--R----VKFSCMAWTHDGKGMFYNAYPQQDGK 196 (710)
T ss_dssp SCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEE--E----ECSCCEEECTTSSEEEEEECCCCSSC
T ss_pred CCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCccccc--C----cccceEEEEeCCCEEEEEEECCcccc
Confidence 4446889999998886666655444 899999987654321111 0 11123578999999998888766
Q ss_pred -------------EEEEECCCCce--eEEe--cCCCCCeEEEEEe-CC-EEEEEeC-----CCcEEEEECCC------Cc
Q 008820 364 -------------IKAWSLLDGTL--SCTM--SGHKSAVSTLAVC-NG-VLYSGSR-----DGTIRLWSLSD------HS 413 (552)
Q Consensus 364 -------------i~iwd~~~~~~--~~~~--~~h~~~v~~l~~~-~~-~l~s~~~-----dg~i~iwd~~~------~~ 413 (552)
|++|++.+++. ...+ ..|...+..+.|+ ++ +|+.++. +..|++||+.+ +.
T Consensus 197 ~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~ 276 (710)
T 2xdw_A 197 SDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGI 276 (710)
T ss_dssp CSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSS
T ss_pred ccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCc
Confidence 99999988763 2222 3355667889999 43 6666554 67899999986 43
Q ss_pred -eeEEEecCCCCceEEEEEEcCCCCEEEEEECC----CcEEEEeCCcc----eeeeecccc--eEEEEEe--cCCEEEEE
Q 008820 414 -LLTVLEEDSSGAVSSVLSLTAVQHTLVVSHES----GSIKVWRNDKF----MKSMQTHKG--SVFAVFL--EGKWLFTG 480 (552)
Q Consensus 414 -~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~d----g~i~iwd~~~~----~~~~~~h~~--~v~~v~~--~~~~l~sg 480 (552)
....+..+... .. ..++++|+.|+..+.. +.|.+||.... ...+..|.. .+..+.+ ++.++++.
T Consensus 277 ~~~~~l~~~~~~-~~--~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~ 353 (710)
T 2xdw_A 277 LKWVKLIDNFEG-EY--DYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCY 353 (710)
T ss_dssp CCCEEEECSSSS-CE--EEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEE
T ss_pred cceEEeeCCCCc-EE--EEEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEE
Confidence 34555544333 23 2577888888776653 35999997643 255555544 6766776 45567778
Q ss_pred eCCCe--EEEEecCCCeeeeeeccCCCcccCcceEEEEEeC-C-eEE-EEe---CCCeEEEEEecC
Q 008820 481 GWDKT--VSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQ-G-KLF-VGC---ADRTVKIALCNR 538 (552)
Q Consensus 481 s~dg~--i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~~-~-~l~-s~s---~Dg~v~iw~~~~ 538 (552)
..|+. |++||+.+++....+... ...+..+++++ + .++ +.+ ..+.|+.||+..
T Consensus 354 ~~~g~~~l~~~~~~~g~~~~~l~~~-----~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~t 414 (710)
T 2xdw_A 354 LHDVKNTLQLHDLATGALLKIFPLE-----VGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTK 414 (710)
T ss_dssp EETTEEEEEEEETTTCCEEEEECCC-----SSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTS
T ss_pred EECCEEEEEEEECCCCCEEEecCCC-----CceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCC
Confidence 88875 566777555443333221 44577888874 2 344 333 357899999863
No 366
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=99.35 E-value=1.9e-13 Score=130.22 Aligned_cols=117 Identities=14% Similarity=0.175 Sum_probs=79.7
Q ss_pred hhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhh-CC-Cc
Q 008820 14 AKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE-QF 89 (552)
Q Consensus 14 ~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~llt-g~-pf 89 (552)
+|+. |+++.+..... .......||+.|+|||++. ...+++++|||||||++|+|++ |+ ||
T Consensus 150 ~~l~Dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~---------------~~~~~~~~Di~slG~il~~ll~~g~~p~ 213 (288)
T 3kfa_A 150 VKVADFGLSRLMTGDTY-TAHAGAKFPIKWTAPESLA---------------YNKFSIKSDVWAFGVLLWEIATYGMSPY 213 (288)
T ss_dssp EEECCCCGGGTSCSSSS-EEETTEEECGGGCCHHHHH---------------HCCCCHHHHHHHHHHHHHHHHTTSCCSS
T ss_pred EEEccCccceeccCCcc-ccccCCccccCcCChhhhc---------------cCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence 4555 44555443332 2345677899999999992 2456789999999999999999 88 99
Q ss_pred hHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHH-HhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHHhhhc
Q 008820 90 TKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYL-LENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELII 167 (552)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~~~~~ 167 (552)
.......+. ...... ...........+.+++.+||+.+|.+||++.++.+.+..+..
T Consensus 214 ~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~ 271 (288)
T 3kfa_A 214 PGIDLSQVY---------------------ELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 271 (288)
T ss_dssp TTCCGGGHH---------------------HHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCCHHHHH---------------------HHHhccCCCCCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHH
Confidence 764433111 000000 001112234458999999999999999999999998887763
No 367
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=99.35 E-value=4.3e-13 Score=130.78 Aligned_cols=131 Identities=13% Similarity=0.171 Sum_probs=73.2
Q ss_pred hhhcc--cccccccccchh--hhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhC--
Q 008820 13 VAKVG--CVGSRICDKEVG--LFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIG-- 86 (552)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg-- 86 (552)
.+|+. |+++.+...... .......||+.|||||++...... .....+.++|||||||+||||+||
T Consensus 180 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~---------~~~~~~~~~DiwslG~il~el~tg~~ 250 (337)
T 3mdy_A 180 TCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNR---------NHFQSYIMADMYSFGLILWEVARRCV 250 (337)
T ss_dssp CEEECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCT---------TCTHHHHHHHHHHHHHHHHHHHTTBC
T ss_pred CEEEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCC---------ccccCccccchHHHHHHHHHHHhccC
Confidence 35666 555554443321 112366899999999999211000 011122359999999999999999
Q ss_pred --------C-CchHHHhhhhhhccccCCCchhhhhhhhHHHHHHHH------HHHhhh-hcCccccHHHHHHhhcccCCC
Q 008820 87 --------E-QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVT------YLLENK-FGSEFVSLQLMFCQCLNFDPG 150 (552)
Q Consensus 87 --------~-pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~-~~~~~~~l~~~~~~~l~~~p~ 150 (552)
+ ||....... ........... ..+... .......+.+++.+||+.+|.
T Consensus 251 ~~~~~~~~~~p~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~ 314 (337)
T 3mdy_A 251 SGGIVEEYQLPYHDLVPSD----------------PSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPA 314 (337)
T ss_dssp BTTBCCCCCCTTTTTSCSS----------------CCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGG
T ss_pred cccccccccccHhhhcCCC----------------CchhhhHHHHhhhccCccccccchhhHHHHHHHHHHHHhhhhChh
Confidence 5 553311110 00000101000 000000 001122388999999999999
Q ss_pred CCcchhhHHHHHHhhhcC
Q 008820 151 CRPLLTNVWKCIRELIIK 168 (552)
Q Consensus 151 ~R~~~~~~~~~l~~~~~~ 168 (552)
+||++.++.+.+..+...
T Consensus 315 ~Rps~~ell~~L~~l~~~ 332 (337)
T 3mdy_A 315 SRLTALRVKKTLAKMSES 332 (337)
T ss_dssp GSCCHHHHHHHHHHHHHT
T ss_pred hCCCHHHHHHHHHHHHhh
Confidence 999999999999988644
No 368
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=99.34 E-value=6.4e-14 Score=140.41 Aligned_cols=110 Identities=11% Similarity=-0.012 Sum_probs=72.7
Q ss_pred hhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cch
Q 008820 14 AKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFT 90 (552)
Q Consensus 14 ~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~ 90 (552)
+|+. |+++..... .....| +.|||||++......-| ......++.++|||||||+||||+||+ ||.
T Consensus 250 ~kL~DFG~a~~~~~~-----~~~~~g-~~y~aPE~~~~~~~~~~-----~~~~~~~~~~~DvwSlGvil~elltg~~Pf~ 318 (413)
T 3dzo_A 250 VFLTGFEHLVRDGAS-----AVSPIG-RGFAPPETTAERMLPFG-----QHHPTLMTFAFDTWTLGLAIYWIWCADLPNT 318 (413)
T ss_dssp EEECCGGGCEETTEE-----ECCCCC-TTTCCHHHHHHHTSTTG-----GGCCEEECHHHHHHHHHHHHHHHHHSSCCCC
T ss_pred EEEEeccceeecCCc-----cccCCC-CceeCchhhhccccccc-----cccCcCCCchhhHHHHHHHHHHHHHCCCCCC
Confidence 6666 666655544 566788 99999999943210000 001245678999999999999999999 997
Q ss_pred HHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHH
Q 008820 91 KELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVW 159 (552)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~ 159 (552)
......+. ... .........++.+++.+||+.+|.+||++.++.
T Consensus 319 ~~~~~~~~-----------------~~~--------~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~~l 362 (413)
T 3dzo_A 319 DDAALGGS-----------------EWI--------FRSCKNIPQPVRALLEGFLRYPKEDRLLPLQAM 362 (413)
T ss_dssp TTGGGSCS-----------------GGG--------GSSCCCCCHHHHHHHHHHTCSSGGGSCCHHHHT
T ss_pred CcchhhhH-----------------HHH--------HhhcccCCHHHHHHHHHHccCChhhCcCHHHHH
Confidence 75543111 000 000011233589999999999999999987653
No 369
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=99.34 E-value=2.1e-13 Score=135.94 Aligned_cols=114 Identities=13% Similarity=0.055 Sum_probs=70.3
Q ss_pred hhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cch
Q 008820 14 AKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFT 90 (552)
Q Consensus 14 ~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~ 90 (552)
.|++ |+++.+...... -...++||+.|||||++....... ....++.++|+|||||+||||++|+ ||.
T Consensus 201 vkL~DFGla~~~~~~~~~-~~~~~~Gt~~Y~APE~l~~~~~~~--------~~~~~~~~~DiwSlGvilyelltG~~Pf~ 271 (412)
T 2vd5_A 201 IRLADFGSCLKLRADGTV-RSLVAVGTPDYLSPEILQAVGGGP--------GTGSYGPECDWWALGVFAYEMFYGQTPFY 271 (412)
T ss_dssp EEECCCTTCEECCTTSCE-ECSSCCSCGGGCCHHHHHHHHTCT--------TCSEECTHHHHHHHHHHHHHHHHSSCTTC
T ss_pred EEEeechhheeccCCCcc-ccceeccccCcCCHHHHhhcccCc--------CCCCCChHHhhhHHhHHHHHHHhCCCCCC
Confidence 5566 667666544321 134578999999999994332211 1245778999999999999999999 997
Q ss_pred HHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhh-hhcCccccHHHHHHhhcccCCCCCcc
Q 008820 91 KELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLEN-KFGSEFVSLQLMFCQCLNFDPGCRPL 154 (552)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~l~~~p~~R~~ 154 (552)
..+...+ +..+.........+ .......++.+++.+||. +|.+|+.
T Consensus 272 ~~~~~~~-----------------~~~i~~~~~~~~~p~~~~~~s~~~~dli~~lL~-~p~~Rlg 318 (412)
T 2vd5_A 272 ADSTAET-----------------YGKIVHYKEHLSLPLVDEGVPEEARDFIQRLLC-PPETRLG 318 (412)
T ss_dssp CSSHHHH-----------------HHHHHTHHHHCCCC----CCCHHHHHHHHTTSS-CGGGCTT
T ss_pred CCCHHHH-----------------HHHHHhcccCcCCCccccCCCHHHHHHHHHHcC-ChhhcCC
Confidence 6443311 11111100000000 012244569999999999 9999853
No 370
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=99.34 E-value=3.6e-13 Score=130.98 Aligned_cols=119 Identities=16% Similarity=0.164 Sum_probs=72.7
Q ss_pred hhhcc--cccccccccch-hhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhh-CC-
Q 008820 13 VAKVG--CVGSRICDKEV-GLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE- 87 (552)
Q Consensus 13 ~~~~~--~~~~~~~~~~~-~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~llt-g~- 87 (552)
..|+. |+++.+..... ........||+.|||||++ . ...++.++|||||||+||||++ |+
T Consensus 185 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~------~---------~~~~~~~~Di~slG~il~ellt~g~~ 249 (333)
T 1mqb_A 185 VCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAI------S---------YRKFTSASDVWSFGIVMWEVMTYGER 249 (333)
T ss_dssp CEEECCCCC-----------------CCCGGGSCHHHH------H---------SCCCCHHHHHHHHHHHHHHHHTTSCC
T ss_pred cEEECCCCcchhhccccccccccCCCCccccccCchhc------c---------cCCCCchhhhHHHHHHHHHHHcCCCC
Confidence 34555 55555544322 1123455679999999998 2 2456789999999999999999 99
Q ss_pred CchHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHH-HhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHHhhh
Q 008820 88 QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYL-LENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELI 166 (552)
Q Consensus 88 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~~~~ 166 (552)
||.......+. ..+... ...........+.+++.+||+.+|.+||++.++.+.+.++.
T Consensus 250 pf~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~ 308 (333)
T 1mqb_A 250 PYWELSNHEVM---------------------KAINDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLI 308 (333)
T ss_dssp TTTTCCHHHHH---------------------HHHHTTCCCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHH
T ss_pred CcccCCHHHHH---------------------HHHHCCCcCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 99653322110 000000 00011123445899999999999999999999999988876
Q ss_pred c
Q 008820 167 I 167 (552)
Q Consensus 167 ~ 167 (552)
.
T Consensus 309 ~ 309 (333)
T 1mqb_A 309 R 309 (333)
T ss_dssp H
T ss_pred h
Confidence 4
No 371
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=99.34 E-value=1.8e-13 Score=133.81 Aligned_cols=112 Identities=17% Similarity=0.167 Sum_probs=72.1
Q ss_pred hhhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cc
Q 008820 13 VAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QF 89 (552)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf 89 (552)
.+|+. |+++.+.. .....||+.|||||++... ....++.++|||||||+||||++|+ ||
T Consensus 192 ~~kL~DfG~a~~~~~------~~~~~gt~~y~aPE~~~~~------------~~~~~~~~~DiwslG~il~ell~g~~p~ 253 (348)
T 1u5q_A 192 LVKLGDFGSASIMAP------ANSFVGTPYWMAPEVILAM------------DEGQYDGKVDVWSLGITCIELAERKPPL 253 (348)
T ss_dssp EEEECCCTTCBSSSS------BCCCCSCGGGCCHHHHHTT------------SSCCBCTHHHHHHHHHHHHHHHHSSCTT
T ss_pred CEEEeeccCceecCC------CCcccCCcceeCHhhhccc------------cCCCCCcHHHHHHHHHHHHHHHhCCCCC
Confidence 35555 45554433 2456899999999998210 1245678999999999999999999 99
Q ss_pred hHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHH
Q 008820 90 TKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKC 161 (552)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~ 161 (552)
......... ...... ..+..........+.+++.+||+.+|.+||++.++.+.
T Consensus 254 ~~~~~~~~~-----------------~~~~~~--~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h 306 (348)
T 1u5q_A 254 FNMNAMSAL-----------------YHIAQN--ESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKH 306 (348)
T ss_dssp TTSCHHHHH-----------------HHHHHS--CCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTC
T ss_pred CCCChHHHH-----------------HHHHhc--CCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 653322100 000000 00000111234458899999999999999998876653
No 372
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=99.34 E-value=1.5e-13 Score=131.50 Aligned_cols=118 Identities=14% Similarity=0.186 Sum_probs=74.4
Q ss_pred hhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cch
Q 008820 14 AKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFT 90 (552)
Q Consensus 14 ~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~ 90 (552)
.|+. |+++.+..... .....||+.|+|||++...... ....++.++|||||||+||+|++|+ ||.
T Consensus 163 ~kl~dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~---------~~~~~~~~~Di~slG~~l~~l~~g~~p~~ 230 (298)
T 1phk_A 163 IKLTDFGFSCQLDPGEK---LREVCGTPSYLAPEIIECSMND---------NHPGYGKEVDMWSTGVIMYTLLAGSPPFW 230 (298)
T ss_dssp EEECCCTTCEECCTTCC---BCCCCSCGGGCCHHHHHHHHCT---------TSCCBCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred EEEecccchhhcCCCcc---cccccCCccccCHHHhcccccc---------ccccCCcccccHhHHHHHHHHHHCCCCCc
Confidence 4555 44555444332 4567899999999999543322 1245678999999999999999999 995
Q ss_pred HHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 91 KELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
......+. ..+.......+.+........+.+++.+||+.+|.+||++.++.+
T Consensus 231 ~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 231 HRKQMLML-----------------RMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA 283 (298)
T ss_dssp CSSHHHHH-----------------HHHHHTCCCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred CccHHHHH-----------------HHHhcCCcccCcccccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence 53322110 000000000011111123345899999999999999999887654
No 373
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=99.34 E-value=2.2e-13 Score=139.81 Aligned_cols=119 Identities=13% Similarity=0.177 Sum_probs=82.1
Q ss_pred hhhhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhh-CC-
Q 008820 12 SVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE- 87 (552)
Q Consensus 12 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~llt-g~- 87 (552)
..+|+. |+++.+..... .......||+.|||||++. ...++.++|||||||+||||+| |+
T Consensus 355 ~~~kl~DFG~a~~~~~~~~-~~~~~~~~~~~y~aPE~~~---------------~~~~~~~sDvwSlG~~l~el~t~g~~ 418 (495)
T 1opk_A 355 HLVKVADFGLSRLMTGDTY-TAHAGAKFPIKWTAPESLA---------------YNKFSIKSDVWAFGVLLWEIATYGMS 418 (495)
T ss_dssp GCEEECCTTCEECCTTCCE-ECCTTCCCCGGGCCHHHHH---------------HCEECHHHHHHHHHHHHHHHHTTSCC
T ss_pred CcEEEeecccceeccCCce-eecCCCcCCcceeCHhHHh---------------cCCCCcHHhHHhHHHHHHHHHhCCCC
Confidence 346666 66766654432 1345667889999999992 2456789999999999999999 88
Q ss_pred CchHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHH-HhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHHhhh
Q 008820 88 QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYL-LENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELI 166 (552)
Q Consensus 88 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~~~~ 166 (552)
||.......+. ..+... ...........+.+++.+||+.+|.+||++.++.+.+..+.
T Consensus 419 p~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~ 477 (495)
T 1opk_A 419 PYPGIDLSQVY---------------------ELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 477 (495)
T ss_dssp SSTTCCGGGHH---------------------HHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred CCCCCCHHHHH---------------------HHHHcCCCCCCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHH
Confidence 99764433111 000000 00111123445899999999999999999999999888765
Q ss_pred c
Q 008820 167 I 167 (552)
Q Consensus 167 ~ 167 (552)
.
T Consensus 478 ~ 478 (495)
T 1opk_A 478 Q 478 (495)
T ss_dssp S
T ss_pred h
Confidence 3
No 374
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=99.34 E-value=1.6e-13 Score=133.30 Aligned_cols=133 Identities=13% Similarity=0.111 Sum_probs=80.4
Q ss_pred hhcc--cccccccccch-hhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cc
Q 008820 14 AKVG--CVGSRICDKEV-GLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QF 89 (552)
Q Consensus 14 ~~~~--~~~~~~~~~~~-~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf 89 (552)
.|+. |+++.+..... ........||+.|||||++. ...+++++|||||||++|+|++|+ ||
T Consensus 166 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~---------------~~~~~~~~Di~slG~il~~ll~g~~p~ 230 (327)
T 3lxl_A 166 VKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLS---------------DNIFSRQSDVWSFGVVLYELFTYCDKS 230 (327)
T ss_dssp EEECCGGGCEECCTTCSEEECSSCCCSCGGGSCHHHHH---------------HCEEEHHHHHHHHHHHHHHHHTTTCGG
T ss_pred EEEcccccceecccCCccceeeccCCccccccCHHHhc---------------cCCCChHHhHHHHHHHHHHHHhCCCCC
Confidence 4555 45554433222 12345567999999999982 245678999999999999999999 99
Q ss_pred hHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHH-HhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHHhhhc
Q 008820 90 TKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYL-LENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELII 167 (552)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~~~~~ 167 (552)
.......+........ . ............. ...........+.+++.+||+.+|.+||++.++.+.+..++.
T Consensus 231 ~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~ 303 (327)
T 3lxl_A 231 CSPSAEFLRMMGCERD-----V-PALSRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWS 303 (327)
T ss_dssp GSHHHHHHHHCC---------C-CHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC--
T ss_pred ccccchhhhhcccccc-----c-ccHHHHHHHhhcccCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 6654432211000000 0 0001111111000 011112234569999999999999999999999999988763
No 375
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=99.34 E-value=1.4e-13 Score=130.47 Aligned_cols=94 Identities=20% Similarity=0.260 Sum_probs=66.0
Q ss_pred hhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhhhhhhccccCCCchhh
Q 008820 32 LSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDYIRCVSTKASDDNIA 110 (552)
Q Consensus 32 ~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~~~~~~~~~~~~~~~~ 110 (552)
.....||+.|+|||++ . ...+++++|||||||++|+|++|+ ||.......+
T Consensus 173 ~~~~~~~~~y~aPE~~------~---------~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~------------- 224 (279)
T 2w5a_A 173 AKTFVGTPYYMSPEQM------N---------RMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKEL------------- 224 (279)
T ss_dssp HHHHHSCCTTCCHHHH------H---------CC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-------------
T ss_pred ccccCCCccccChHHh------c---------cCCCCchhhHHHHHHHHHHHHHCCCCCcccCHHHH-------------
Confidence 4567899999999998 2 245678999999999999999999 9966432211
Q ss_pred hhhhhHHHHHHHHHHH-hhhhcCccccHHHHHHhhcccCCCCCcchhhHHHH
Q 008820 111 CLGMYMAWMEKVTYLL-ENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKC 161 (552)
Q Consensus 111 ~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~ 161 (552)
...+.... .........++.+++.+||+.+|.+||++.++.+.
T Consensus 225 --------~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~ 268 (279)
T 2w5a_A 225 --------AGKIREGKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEILEN 268 (279)
T ss_dssp --------HHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred --------HHHHhhcccccCCcccCHHHHHHHHHHcCCCcccCCCHHHHHhC
Confidence 01110000 01111234459999999999999999998886653
No 376
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.34 E-value=5.8e-10 Score=119.75 Aligned_cols=236 Identities=11% Similarity=0.037 Sum_probs=145.5
Q ss_pred CCCCCeEEEEEecCCCCEEEEEcC----CCcEEEEeCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCc--
Q 008820 290 GHDHKVMAVVYVDEDQPLCISGDS----GGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRT-- 363 (552)
Q Consensus 290 ~h~~~v~~v~~~~~~~~~l~s~~~----dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~-- 363 (552)
+|...+.+++|+|++..++++.+. +..|++||+.+++.... ....... ....+++++|+.|+.++.|..
T Consensus 118 ~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~-~~~~~~~----~~~~~wspDg~~l~~~~~d~~~~ 192 (695)
T 2bkl_A 118 DGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKV-DVIEGGK----YATPKWTPDSKGFYYEWLPTDPS 192 (695)
T ss_dssp SSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSS-CCBSCCT----TCCCEECTTSSEEEEEECCCCTT
T ss_pred CCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCC-cccCccc----ccceEEecCCCEEEEEEecCCCC
Confidence 355578999999988866655543 45799999998764311 0111110 023479999999999888776
Q ss_pred -----------EEEEECCCCc----eeEEecCCCCCeEEEEEe-CC-EEEEEeCCC----cEEEEECCCCceeEEEecCC
Q 008820 364 -----------IKAWSLLDGT----LSCTMSGHKSAVSTLAVC-NG-VLYSGSRDG----TIRLWSLSDHSLLTVLEEDS 422 (552)
Q Consensus 364 -----------i~iwd~~~~~----~~~~~~~h~~~v~~l~~~-~~-~l~s~~~dg----~i~iwd~~~~~~~~~~~~~~ 422 (552)
|++|++.+++ .+.....|...+.++.|+ ++ +|+.++.++ .|++||..+++. ..+..+.
T Consensus 193 ~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~-~~l~~~~ 271 (695)
T 2bkl_A 193 IKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDF-RLLVKGV 271 (695)
T ss_dssp SCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSC-EEEEECS
T ss_pred CccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCce-EEeecCC
Confidence 9999998876 333334455678899999 44 666666555 677777655543 3343333
Q ss_pred CCceEEEEEEcCCCCEEEEEE---CCCcEEEEeCCcce----eeeecc--cceEEEEEe-cCCEEEEEeCCCeEEEEecC
Q 008820 423 SGAVSSVLSLTAVQHTLVVSH---ESGSIKVWRNDKFM----KSMQTH--KGSVFAVFL-EGKWLFTGGWDKTVSVQELA 492 (552)
Q Consensus 423 ~~~~~~~~~~s~~~~~l~~g~---~dg~i~iwd~~~~~----~~~~~h--~~~v~~v~~-~~~~l~sgs~dg~i~iwd~~ 492 (552)
... ... .+ +++.+++.+. .++.|.+||..... ..+..| ...+..+++ ++.++++...|+..++|.+.
T Consensus 272 ~~~-~~~-~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~lv~~~~~dg~~~l~~~~ 348 (695)
T 2bkl_A 272 GAK-YEV-HA-WKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIVGGHLSLEYLKDATSEVRVAT 348 (695)
T ss_dssp SCC-EEE-EE-ETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEETTEEEEEEEETTEEEEEEEE
T ss_pred Cce-EEE-Ee-cCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEECCEEEEEEEECCEEEEEEEe
Confidence 333 332 33 5666444433 25789999975432 444433 446777776 66778888899988888654
Q ss_pred -CCeeeeeeccCCCcccCcceEEEEEeC--CeEE-EEe---CCCeEEEEEecC
Q 008820 493 -GDEFEEDVIPTGAIPCGSVITALLYWQ--GKLF-VGC---ADRTVKIALCNR 538 (552)
Q Consensus 493 -~~~~~~~~~~~~~~~~~~~v~~l~~~~--~~l~-s~s---~Dg~v~iw~~~~ 538 (552)
++.....+.. +....+..+++++ +.++ +.+ ..++|++||+..
T Consensus 349 ~~g~~~~~l~~----~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~ 397 (695)
T 2bkl_A 349 LKGKPVRTVQL----PGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVST 397 (695)
T ss_dssp TTCCEEEECCC----SSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTT
T ss_pred CCCCeeEEecC----CCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCC
Confidence 2322222211 1134566677764 2344 322 347899999863
No 377
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=99.34 E-value=2.2e-13 Score=134.46 Aligned_cols=116 Identities=14% Similarity=0.073 Sum_probs=77.5
Q ss_pred hhhhhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-
Q 008820 11 KSVAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE- 87 (552)
Q Consensus 11 ~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~- 87 (552)
...+|+. |+|+.+.........+...||+.|||||++ .| ..+++++|||||||+||||+||+
T Consensus 219 ~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~------~~---------~~~~~~~DiwslG~il~elltg~~ 283 (365)
T 3e7e_A 219 SAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEML------SN---------KPWNYQIDYFGVAATVYCMLFGTY 283 (365)
T ss_dssp CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHH------TT---------CCBSTHHHHHHHHHHHHHHHHSSC
T ss_pred cCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHh------cC---------CCCCccccHHHHHHHHHHHHhCCC
Confidence 3456666 677655533333346778999999999999 33 45789999999999999999999
Q ss_pred CchHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcc-hhhHHHHHHhhh
Q 008820 88 QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPL-LTNVWKCIRELI 166 (552)
Q Consensus 88 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~-~~~~~~~l~~~~ 166 (552)
||......... .... . ... .....+.+++.+||+.+|.+|++ +.++.+.+..++
T Consensus 284 pf~~~~~~~~~---~~~~------~--~~~--------------~~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l 338 (365)
T 3e7e_A 284 MKVKNEGGECK---PEGL------F--RRL--------------PHLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVF 338 (365)
T ss_dssp CCEEEETTEEE---ECSC------C--TTC--------------SSHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHH
T ss_pred ccccCCCCcee---echh------c--ccc--------------CcHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHH
Confidence 99553322000 0000 0 000 01113778999999999999965 566666666654
No 378
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=99.34 E-value=9.9e-14 Score=132.04 Aligned_cols=111 Identities=19% Similarity=0.181 Sum_probs=71.5
Q ss_pred hhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cch
Q 008820 14 AKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFT 90 (552)
Q Consensus 14 ~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~ 90 (552)
.|+. |+++.+..... .....||+.|+|||++ . +.+++++|||||||+||+|++|+ ||.
T Consensus 163 ~kL~Dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~------~----------~~~~~~~Di~slG~~l~~l~~g~~p~~ 223 (287)
T 2wei_A 163 IKIIDFGLSTCFQQNTK---MKDRIGTAYYIAPEVL------R----------GTYDEKCDVWSAGVILYILLSGTPPFY 223 (287)
T ss_dssp EEECSTTGGGTBCCCSS---CSCHHHHHTTCCHHHH------T----------TCCCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred EEEeccCcceeecCCCc---cccccCcccccChHHh------c----------CCCCCchhhHhHHHHHHHHHhCCCCCC
Confidence 4555 44444433322 3456799999999998 2 34678999999999999999999 996
Q ss_pred HHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 91 KELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
......+. ..+.......+.+.......++.+++.+||+.+|.+||++.++.+
T Consensus 224 ~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 276 (287)
T 2wei_A 224 GKNEYDIL-----------------KRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLE 276 (287)
T ss_dssp CSSHHHHH-----------------HHHHHCCCCCCSGGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CCCHHHHH-----------------HHHHcCCCCCCchhhhhcCHHHHHHHHHHcccChhhCcCHHHHhc
Confidence 54322110 000000000001111223445899999999999999999988766
No 379
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=99.34 E-value=3.5e-13 Score=128.56 Aligned_cols=131 Identities=15% Similarity=0.114 Sum_probs=72.6
Q ss_pred hhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cc-
Q 008820 14 AKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QF- 89 (552)
Q Consensus 14 ~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf- 89 (552)
+|+. |+++.+..... ..+...||+.|||||++ .+ ...++.++|||||||+||||++|. ||
T Consensus 140 ~kl~Dfg~~~~~~~~~~--~~~~~~~t~~y~aPE~~------~~--------~~~~~~~~DiwslG~il~~l~~~~~p~~ 203 (292)
T 3o0g_A 140 LKLANFGLARAFGIPVR--CYSAEVVTLWYRPPDVL------FG--------AKLYSTSIDMWSAGCIFAELANAGRPLF 203 (292)
T ss_dssp EEECCCTTCEECCSCCS--CCCSCCSCGGGCCHHHH------TT--------CSCCCTHHHHHHHHHHHHHHTTTSCCSC
T ss_pred EEEeecccceecCCccc--cccCCccccCCcChHHH------cC--------CCCcCchHHHHHHHHHHHHHHHcCCCCc
Confidence 4555 55655543322 25677899999999998 22 123678999999999999999999 75
Q ss_pred hHHHhh----hhhhccccCCCchhhhhhhhHHHHHH----HHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 90 TKELID----YIRCVSTKASDDNIACLGMYMAWMEK----VTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 90 ~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
...... .+........+..|............ ..............++.+++.+||+.+|.+||++.++.+
T Consensus 204 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 282 (292)
T 3o0g_A 204 PGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ 282 (292)
T ss_dssp CCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CCCCHHHHHHHHHHHhCCCChhhhhhhcccccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhc
Confidence 222211 11101111111111110000000000 000000011123345889999999999999999887655
No 380
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.34 E-value=4.2e-11 Score=119.12 Aligned_cols=228 Identities=6% Similarity=-0.089 Sum_probs=139.9
Q ss_pred EEEEc--CCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEE-------------------EEEecCCCCEEEEE----
Q 008820 257 GLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMA-------------------VVYVDEDQPLCISG---- 311 (552)
Q Consensus 257 ~l~~s--~~~l~s~s~dg~I~iwd~~~~~~~~~~~~h~~~v~~-------------------v~~~~~~~~~l~s~---- 311 (552)
.+.|+ +++|+.++.++.|++||+.+++.......+...... +.|+|++..+++..
T Consensus 85 ~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~ 164 (396)
T 3c5m_A 85 GGFISTDERAFFYVKNELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHT 164 (396)
T ss_dssp TCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHT
T ss_pred cceECCCCCEEEEEEcCCcEEEEECCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccC
Confidence 36788 899999999999999999998877666655543222 23455554332222
Q ss_pred cCCCcEEEEeCCCCCCCccccccccCCCceeeeEEEEee-CCCEEEEeeCC------CcEEEEECCCCceeEEecCCC--
Q 008820 312 DSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTT-SGRYLYTGSGD------RTIKAWSLLDGTLSCTMSGHK-- 382 (552)
Q Consensus 312 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~sgs~d------g~i~iwd~~~~~~~~~~~~h~-- 382 (552)
..+..|.+||+.++...... ... .......++| +++.|+..+.+ ..|.+||+..++.. .+..+.
T Consensus 165 ~~~~~l~~~d~~~g~~~~~~----~~~--~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~-~l~~~~~~ 237 (396)
T 3c5m_A 165 NPTCRLIKVDIETGELEVIH----QDT--AWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVR-KIKEHAEG 237 (396)
T ss_dssp CCCEEEEEEETTTCCEEEEE----EES--SCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCE-ESSCCCTT
T ss_pred CCcceEEEEECCCCcEEeec----cCC--cccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCcee-EeeccCCC
Confidence 45678999998865432221 111 1112346788 67766665543 46889998766543 333332
Q ss_pred CCeEEEEEe-CC-EEEEEeCC-----CcEEEEECCCCceeEEEecCCCCceEEEEEEcC-CCCEEEEEE-----------
Q 008820 383 SAVSTLAVC-NG-VLYSGSRD-----GTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTA-VQHTLVVSH----------- 443 (552)
Q Consensus 383 ~~v~~l~~~-~~-~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~-~~~~l~~g~----------- 443 (552)
..+..+.|+ ++ .|+.++.+ +.|++||+.+++........ + .. ..|+| +++++++++
T Consensus 238 ~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~--~-~~--~~~s~~dg~~l~~~~~~~p~~~~~~~ 312 (396)
T 3c5m_A 238 ESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVMP--P-CS--HLMSNFDGSLMVGDGCDAPVDVADAD 312 (396)
T ss_dssp EEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEECC--S-EE--EEEECSSSSEEEEEECCC--------
T ss_pred ccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeeeCC--C-CC--CCccCCCCceEEEecCCcceeecccc
Confidence 357788999 44 56655543 44999999988765433322 2 22 57888 999888765
Q ss_pred -----CCCcEEEEeCCc-ceeeeecccce-----------E--EEEEecCCEEEEEeC-CCeEEEE--ecCCCee
Q 008820 444 -----ESGSIKVWRNDK-FMKSMQTHKGS-----------V--FAVFLEGKWLFTGGW-DKTVSVQ--ELAGDEF 496 (552)
Q Consensus 444 -----~dg~i~iwd~~~-~~~~~~~h~~~-----------v--~~v~~~~~~l~sgs~-dg~i~iw--d~~~~~~ 496 (552)
.++.|++||... ....+..+... + .+++++|+.|+..+. ++...+| |+.++..
T Consensus 313 ~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~~~~~~~~ 387 (396)
T 3c5m_A 313 SYNIENDPFLYVLNTKAKSAQKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYIADVPESYK 387 (396)
T ss_dssp --CCCCCCEEEEEETTTTBCCEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEECCTTCC
T ss_pred ccccCCCCcEEEEecccCceEEccCCCCccccccccccCCCCCceEccCCCeEEEEecCCCCceEEEEEEccccc
Confidence 347899999643 23444444431 2 244568988887765 4554444 5555443
No 381
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=99.33 E-value=2.4e-13 Score=132.44 Aligned_cols=109 Identities=18% Similarity=0.326 Sum_probs=72.4
Q ss_pred hhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cch
Q 008820 14 AKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFT 90 (552)
Q Consensus 14 ~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~ 90 (552)
.|+. |+++.+..... ......||+.|||||++ . ...++.++|||||||+||+|++|+ ||.
T Consensus 180 ~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~------~---------~~~~~~~~Di~slG~il~~l~~g~~pf~ 242 (335)
T 2owb_A 180 VKIGDFGLATKVEYDGE--RKKVLCGTPNYIAPEVL------S---------KKGHSFEVDVWSIGCIMYTLLVGKPPFE 242 (335)
T ss_dssp EEECCCTTCEECCSTTC--CBCCCCSCCSSCCHHHH------H---------TSCBCTHHHHHHHHHHHHHHHHSSCTTC
T ss_pred EEEeeccCceecccCcc--cccccCCCccccCHHHh------c---------cCCCCchhhHHHHHHHHHHHHHCcCCCC
Confidence 4555 45555443222 24567899999999999 2 244568999999999999999999 996
Q ss_pred HHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 91 KELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
....... ..................+.+++.+||+.+|.+||++.++.+
T Consensus 243 ~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 291 (335)
T 2owb_A 243 TSCLKET---------------------YLRIKKNEYSIPKHINPVAASLIQKMLQTDPTARPTINELLN 291 (335)
T ss_dssp CSSHHHH---------------------HHHHHHTCCCCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred CCCHHHH---------------------HHHHhcCCCCCCccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 6433211 000000000111123345889999999999999999988765
No 382
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=99.33 E-value=7.6e-13 Score=128.38 Aligned_cols=129 Identities=16% Similarity=0.139 Sum_probs=73.9
Q ss_pred hhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cch
Q 008820 14 AKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFT 90 (552)
Q Consensus 14 ~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~ 90 (552)
+|+. |+++.+.... ......||+.|||||++ . ...++.++|||||||+||+|++|+ ||.
T Consensus 159 ~kl~Dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~------~---------~~~~~~~~Di~slG~il~~l~~g~~pf~ 220 (326)
T 1blx_A 159 IKLADFGLARIYSFQM---ALTSVVVTLWYRAPEVL------L---------QSSYATPVDLWSVGCIFAEMFRRKPLFR 220 (326)
T ss_dssp EEECSCCSCCCCCGGG---GGCCCCCCCTTCCHHHH------T---------TCCCCTHHHHHHHHHHHHHHHHSSCSCC
T ss_pred EEEecCcccccccCCC---CccccccccceeCHHHH------h---------cCCCCcchhHHHHHHHHHHHHcCCCCCC
Confidence 4555 5555544332 25678899999999999 2 255778999999999999999999 996
Q ss_pred HHHhhhh----hhccccCCCchhhhh-hhhHHHHH-HHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 91 KELIDYI----RCVSTKASDDNIACL-GMYMAWME-KVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 91 ~~~~~~~----~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
....... ........+..|... ........ ................+.+++.+||+.+|.+||++.++.+
T Consensus 221 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 296 (326)
T 1blx_A 221 GSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 296 (326)
T ss_dssp CSSHHHHHHHHHHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred CCCHHHHHHHHHHHcCCCCcccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 5332211 000000000111000 00000000 0000000111223445889999999999999999887654
No 383
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=99.33 E-value=2.8e-13 Score=129.45 Aligned_cols=114 Identities=14% Similarity=0.252 Sum_probs=70.7
Q ss_pred hhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cch
Q 008820 14 AKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFT 90 (552)
Q Consensus 14 ~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~ 90 (552)
+|+. |+++.+..... ......||+.|+|||++... ...+++++|||||||+||+|++|+ ||.
T Consensus 162 ~kl~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~-------------~~~~~~~~Di~slG~il~~l~~g~~pf~ 226 (295)
T 2clq_A 162 LKISDFGTSKRLAGINP--CTETFTGTLQYMAPEIIDKG-------------PRGYGKAADIWSLGCTIIEMATGKPPFY 226 (295)
T ss_dssp EEECCTTTCEESCC-------CCCCCCGGGCCHHHHHHG-------------GGGCSHHHHHHHHHHHHHHHHHTSCTTG
T ss_pred EEEeecccccccCCCCC--cccccCCCccccChhhhcCC-------------CCCCCcHHHHHHHHHHHHHHHHCCCCcc
Confidence 4555 44555443322 25567899999999999321 123568999999999999999999 996
Q ss_pred HHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 91 KELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
........ ...................++.+++.+||+.+|.+||++.++.+
T Consensus 227 ~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 278 (295)
T 2clq_A 227 ELGEPQAA------------------MFKVGMFKVHPEIPESMSAEAKAFILKCFEPDPDKRACANDLLV 278 (295)
T ss_dssp GGSSHHHH------------------HHHHHHHCCCCCCCTTSCHHHHHHHHHTTCSSTTTSCCHHHHHT
T ss_pred CCCchhHH------------------HHhhccccccccccccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 53221000 00000000001111223446899999999999999999887654
No 384
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=99.33 E-value=4e-13 Score=128.35 Aligned_cols=129 Identities=15% Similarity=0.193 Sum_probs=76.0
Q ss_pred hhcc--cccccccccch-hhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cc
Q 008820 14 AKVG--CVGSRICDKEV-GLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QF 89 (552)
Q Consensus 14 ~~~~--~~~~~~~~~~~-~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf 89 (552)
+|+. |+++.+..... ........||+.|||||++. ...+++++|||||||++|||+||. ||
T Consensus 153 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~---------------~~~~~~~~Di~slG~~l~~l~~g~~~~ 217 (295)
T 3ugc_A 153 VKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLT---------------ESKFSVASDVWSFGVVLYELFTYIEKS 217 (295)
T ss_dssp EEECCCCSCC-------------CTTCGGGGCCHHHHH---------------HCCCCHHHHHHHHHHHHHHHHHTTCTT
T ss_pred EEEccCcccccccCCcceeeeccCCCCccceeCcHHhc---------------CCCCChHHHHHHHHHHHHHHHhccccc
Confidence 4555 55655543322 12244566889999999992 245678999999999999999999 98
Q ss_pred hHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHH-----hhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHHh
Q 008820 90 TKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLL-----ENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRE 164 (552)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~~ 164 (552)
................ ............ .+.......++.+++.+||+.+|.+||++.++.+.+.+
T Consensus 218 ~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~ 288 (295)
T 3ugc_A 218 KSPPAEFMRMIGNDKQ---------GQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQ 288 (295)
T ss_dssp CSHHHHHHHHHCTTCC---------THHHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHH
T ss_pred CCChHHHHhhhcCccc---------cchhHHHHHHHHhccCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHH
Confidence 5543221110011000 001111111111 11112234569999999999999999999999998887
Q ss_pred hh
Q 008820 165 LI 166 (552)
Q Consensus 165 ~~ 166 (552)
+.
T Consensus 289 l~ 290 (295)
T 3ugc_A 289 IR 290 (295)
T ss_dssp HH
T ss_pred HH
Confidence 65
No 385
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=99.33 E-value=4.5e-13 Score=129.07 Aligned_cols=132 Identities=20% Similarity=0.245 Sum_probs=66.7
Q ss_pred hhhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cc
Q 008820 13 VAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QF 89 (552)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf 89 (552)
..|+. |+++.+..... ..+...||+.|+|||++. + ...+++++|||||||+||+|++|+ ||
T Consensus 140 ~~kl~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~------~--------~~~~~~~~Di~slG~il~~l~~g~~p~ 203 (311)
T 4agu_A 140 VIKLCDFGFARLLTGPSD--YYDDEVATRWYRSPELLV------G--------DTQYGPPVDVWAIGCVFAELLSGVPLW 203 (311)
T ss_dssp CEEECCCTTCEECC--------------GGGCCHHHHH------T--------CSCCCTHHHHHHHHHHHHHHHHSSCSC
T ss_pred CEEEeeCCCchhccCccc--ccCCCcCCccccChHHHh------c--------CCCCCcchhhHHHHHHHHHHHhCCCCC
Confidence 34555 45555543332 256778999999999982 2 245678999999999999999999 99
Q ss_pred hHHHhhhh----hhccccCCCchhhhhhhhHHHHHH-HH-----HHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHH
Q 008820 90 TKELIDYI----RCVSTKASDDNIACLGMYMAWMEK-VT-----YLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVW 159 (552)
Q Consensus 90 ~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~-~~-----~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~ 159 (552)
........ ........+..+..+......... .+ ............++.+++.+||+.+|.+||++.++.
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell 283 (311)
T 4agu_A 204 PGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLL 283 (311)
T ss_dssp CCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHH
T ss_pred CCCCHHHHHHHHHHHhcccccccccccccccccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHh
Confidence 55322211 000000000000000000000000 00 000000112334588999999999999999988766
Q ss_pred H
Q 008820 160 K 160 (552)
Q Consensus 160 ~ 160 (552)
+
T Consensus 284 ~ 284 (311)
T 4agu_A 284 H 284 (311)
T ss_dssp T
T ss_pred c
Confidence 5
No 386
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=99.33 E-value=2.2e-13 Score=128.97 Aligned_cols=98 Identities=15% Similarity=0.211 Sum_probs=68.0
Q ss_pred hhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhh-CC-CchHHHhhhhhhccccCCCchhh
Q 008820 33 SDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE-QFTKELIDYIRCVSTKASDDNIA 110 (552)
Q Consensus 33 ~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~llt-g~-pf~~~~~~~~~~~~~~~~~~~~~ 110 (552)
....||+.|+|||++. ...+++++|||||||++|+|+| |+ ||.......+.
T Consensus 172 ~~~~~~~~y~aPE~~~---------------~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~------------ 224 (278)
T 1byg_A 172 DTGKLPVKWTAPEALR---------------EKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVV------------ 224 (278)
T ss_dssp ----CCTTTSCHHHHH---------------HCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHH------------
T ss_pred cCCCccccccCHHHhC---------------CCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHH------------
Confidence 3457899999999982 2456789999999999999998 99 99764333110
Q ss_pred hhhhhHHHHHHHHHH-HhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHHhhh
Q 008820 111 CLGMYMAWMEKVTYL-LENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELI 166 (552)
Q Consensus 111 ~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~~~~ 166 (552)
..+... ...........+.+++.+||+.+|.+||++.++.+.+..+.
T Consensus 225 ---------~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~ 272 (278)
T 1byg_A 225 ---------PRVEKGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIK 272 (278)
T ss_dssp ---------HHHTTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ---------HHHhcCCCCCCcccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHH
Confidence 000000 00111123445899999999999999999999999888764
No 387
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=99.33 E-value=4e-13 Score=129.83 Aligned_cols=104 Identities=16% Similarity=0.256 Sum_probs=71.2
Q ss_pred hhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhhhhhhccccCCCchhhh
Q 008820 33 SDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDYIRCVSTKASDDNIAC 111 (552)
Q Consensus 33 ~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~~~~~~~~~~~~~~~~~ 111 (552)
....||+.|+|||++ .+ .....+++++|||||||+||||++|+ ||.......-. .
T Consensus 201 ~~~~gt~~y~aPE~~------~~------~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~------------~ 256 (317)
T 2buj_A 201 AAQRCTISYRAPELF------SV------QSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDS------------V 256 (317)
T ss_dssp HHHHSCGGGCCGGGS------SC------CSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSC------------H
T ss_pred ccccCCcccCCHhHh------cc------CCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccch------------h
Confidence 466789999999998 22 01234678999999999999999999 99764322000 0
Q ss_pred hhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHHhhh
Q 008820 112 LGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELI 166 (552)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~~~~ 166 (552)
...... .. ..+.......++.+++.+||+.+|.+||++.++.+.+..+.
T Consensus 257 ---~~~~~~-~~--~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~ 305 (317)
T 2buj_A 257 ---ALAVQN-QL--SIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQ 305 (317)
T ss_dssp ---HHHHHC-C----CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTC
T ss_pred ---hHHhhc-cC--CCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcC
Confidence 000000 00 01111223446999999999999999999999999888764
No 388
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=99.33 E-value=2.6e-13 Score=129.63 Aligned_cols=110 Identities=18% Similarity=0.309 Sum_probs=72.4
Q ss_pred hhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cch
Q 008820 14 AKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFT 90 (552)
Q Consensus 14 ~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~ 90 (552)
+|+. |+++.+..... ......||+.|+|||++ . ....+.++|||||||+||+|++|+ ||.
T Consensus 154 ~kl~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~------~---------~~~~~~~~Di~slG~~l~~l~~g~~p~~ 216 (294)
T 2rku_A 154 VKIGDFGLATKVEYDGE--RKKVLCGTPNYIAPEVL------S---------KKGHSFEVDVWSIGCIMYTLLVGKPPFE 216 (294)
T ss_dssp EEECCCTTCEECCSTTC--CBCCCCSCCSSCCHHHH------T---------TSCBCTHHHHHHHHHHHHHHHHSSCTTC
T ss_pred EEEEeccCceecccCcc--ccccccCCCCcCCcchh------c---------cCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence 4555 44544432221 24557899999999998 2 245678999999999999999999 996
Q ss_pred HHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHH
Q 008820 91 KELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKC 161 (552)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~ 161 (552)
........ .................+.+++.+||+.+|.+||++.++.+.
T Consensus 217 ~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~ 266 (294)
T 2rku_A 217 TSCLKETY---------------------LRIKKNEYSIPKHINPVAASLIQKMLQTDPTARPTINELLND 266 (294)
T ss_dssp CSSHHHHH---------------------HHHHTTCCCCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred CCCHHHHH---------------------HHHhhccCCCccccCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 64332110 000000000111233458899999999999999999887663
No 389
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=99.33 E-value=2.1e-13 Score=131.74 Aligned_cols=128 Identities=18% Similarity=0.261 Sum_probs=78.6
Q ss_pred hhcc--cccccccccch-hhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cc
Q 008820 14 AKVG--CVGSRICDKEV-GLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QF 89 (552)
Q Consensus 14 ~~~~--~~~~~~~~~~~-~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf 89 (552)
.|+. |+++.+..... ........||+.|+|||++. ...++.++|||||||++|+|+||+ ||
T Consensus 173 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~---------------~~~~~~~~Di~slG~il~~ll~g~~p~ 237 (318)
T 3lxp_A 173 VKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLK---------------EYKFYYASDVWSFGVTLYELLTHCDSS 237 (318)
T ss_dssp EEECCGGGCEECCTTCSEEEC---CCCCGGGCCHHHHH---------------HCEEEHHHHHHHHHHHHHHHHTTTCGG
T ss_pred EEECCccccccccccccccccccCCCCCceeeChHHhc---------------CCCCCcHHHHHHHHHHHHHHHhCCCcc
Confidence 4555 45555443322 12345677999999999992 245668999999999999999999 99
Q ss_pred hHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHh-----hhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHHh
Q 008820 90 TKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLE-----NKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRE 164 (552)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~~ 164 (552)
.............. .............. ........++.+++.+||+.+|.+||++.++.+.+..
T Consensus 238 ~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~ 307 (318)
T 3lxp_A 238 QSPPTKFLELIGIA----------QGQMTVLRLTELLERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKT 307 (318)
T ss_dssp GSHHHHHHHHHCSC----------CHHHHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred cccchhhhhhhccc----------ccchhHHHHHHHHhcccCCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHH
Confidence 66443311100000 00000011111111 1112234569999999999999999999999988877
Q ss_pred hh
Q 008820 165 LI 166 (552)
Q Consensus 165 ~~ 166 (552)
+.
T Consensus 308 l~ 309 (318)
T 3lxp_A 308 VH 309 (318)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 390
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=99.33 E-value=2.6e-13 Score=128.55 Aligned_cols=116 Identities=15% Similarity=0.159 Sum_probs=78.2
Q ss_pred hhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhh-CC-Cc
Q 008820 14 AKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE-QF 89 (552)
Q Consensus 14 ~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~llt-g~-pf 89 (552)
.|+. |+++.+...... ......||+.|+|||++. ...+++++|||||||+||||++ |+ ||
T Consensus 148 ~kl~Dfg~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~---------------~~~~~~~~Di~slG~il~el~~~g~~p~ 211 (279)
T 1qpc_A 148 CKIADFGLARLIEDNEYT-AREGAKFPIKWTAPEAIN---------------YGTFTIKSDVWSFGILLTEIVTHGRIPY 211 (279)
T ss_dssp EEECCCTTCEECSSSCEE-CCTTCCCCTTTSCHHHHH---------------HCEECHHHHHHHHHHHHHHHHTTTCCSS
T ss_pred EEECCCcccccccCcccc-cccCCCCccCccChhhhc---------------cCCCCchhhhHHHHHHHHHHHhCCCCCC
Confidence 4555 455555443321 245667899999999992 2456789999999999999999 89 99
Q ss_pred hHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHH-HhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHHhhh
Q 008820 90 TKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYL-LENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELI 166 (552)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~~~~ 166 (552)
.......+. ..+... ...........+.+++.+||+.+|.+||++.++.+.+..+.
T Consensus 212 ~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~ 268 (279)
T 1qpc_A 212 PGMTNPEVI---------------------QNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFF 268 (279)
T ss_dssp TTCCHHHHH---------------------HHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred cccCHHHHH---------------------HHHhcccCCCCcccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHH
Confidence 764333110 000000 00011123345899999999999999999999999888765
No 391
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=99.33 E-value=2.2e-13 Score=130.68 Aligned_cols=132 Identities=15% Similarity=0.156 Sum_probs=80.6
Q ss_pred hhcc--cccccccccch-hhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cc
Q 008820 14 AKVG--CVGSRICDKEV-GLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QF 89 (552)
Q Consensus 14 ~~~~--~~~~~~~~~~~-~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf 89 (552)
+|+. |+++.+..... ........||+.|+|||++. ...++.++|||||||++|+|+||. |+
T Consensus 165 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~---------------~~~~~~~~Di~slG~il~~l~~g~~p~ 229 (302)
T 4e5w_A 165 VKIGDFGLTKAIETDKEYYTVKDDRDSPVFWYAPECLM---------------QSKFYIASDVWSFGVTLHELLTYCDSD 229 (302)
T ss_dssp EEECCCTTCEECCTTCCEEECCCCTTCCGGGCCHHHHH---------------HCEEEHHHHHHHHHHHHHHHHTTTCGG
T ss_pred EEECcccccccccCCCcceeccCCCCCCccccCCeeec---------------CCCCCcchhHHHHHHHHHHHHHccCCC
Confidence 4555 45555544322 12355678999999999992 245668999999999999999999 98
Q ss_pred hHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHH-HhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHHhhh
Q 008820 90 TKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYL-LENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELI 166 (552)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~~~~ 166 (552)
.......... ... .. .. ............. ...........+.+++.+||+.+|.+||++.++.+.+..++
T Consensus 230 ~~~~~~~~~~-~~~-~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll 301 (302)
T 4e5w_A 230 SSPMALFLKM-IGP-TH---GQ-MTVTRLVNTLKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL 301 (302)
T ss_dssp GSHHHHHHHH-HCS-CC---GG-GHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred cchhhHHhhc-cCC-cc---cc-cCHHHHHHHHhccCCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence 5543221110 000 00 00 0001111111000 01111223456999999999999999999999999888764
No 392
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=99.33 E-value=3.5e-13 Score=129.31 Aligned_cols=110 Identities=19% Similarity=0.324 Sum_probs=73.9
Q ss_pred hhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cch
Q 008820 14 AKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFT 90 (552)
Q Consensus 14 ~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~ 90 (552)
.|+. |+++.+...... .....||+.|+|||++ . ...+++++|||||||+||+|++|+ ||.
T Consensus 158 ~kl~Dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~------~---------~~~~~~~~Di~slG~il~~l~~g~~p~~ 220 (303)
T 3a7i_A 158 VKLADFGVAGQLTDTQIK--RNTFVGTPFWMAPEVI------K---------QSAYDSKADIWSLGITAIELARGEPPHS 220 (303)
T ss_dssp EEECCCTTCEECBTTBCC--BCCCCSCGGGCCHHHH------T---------TCCBCTHHHHHHHHHHHHHHHHSSCTTT
T ss_pred EEEeecccceecCccccc--cCccCCCcCccCHHHH------h---------cCCCCchhhhHHHHHHHHHHccCCCCCC
Confidence 4555 455555444322 4567899999999999 2 255678999999999999999999 996
Q ss_pred HHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHH-HhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHH
Q 008820 91 KELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYL-LENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKC 161 (552)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~ 161 (552)
......+ ...+... +..........+.+++.+||+.+|.+||++.++.+.
T Consensus 221 ~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 271 (303)
T 3a7i_A 221 ELHPMKV---------------------LFLIPKNNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKH 271 (303)
T ss_dssp TSCHHHH---------------------HHHHHHSCCCCCCSSCCHHHHHHHHHHCCSSGGGSCCHHHHTTC
T ss_pred CcCHHHH---------------------HHHhhcCCCCCCccccCHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 5332211 0001000 011111234458999999999999999998877653
No 393
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=99.33 E-value=2.6e-13 Score=128.32 Aligned_cols=110 Identities=25% Similarity=0.361 Sum_probs=63.3
Q ss_pred hhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cch
Q 008820 14 AKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFT 90 (552)
Q Consensus 14 ~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~ 90 (552)
.|+. |+++.+.... ......||+.|+|||++ .+ ....++++|||||||++|+|++|+ ||.
T Consensus 150 ~~l~dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~------~~--------~~~~~~~~Di~slG~~l~~l~~g~~p~~ 212 (276)
T 2h6d_A 150 AKIADFGLSNMMSDGE---FLRTSCGSPNYAAPEVI------SG--------RLYAGPEVDIWSCGVILYALLCGTLPFD 212 (276)
T ss_dssp EEECCCCGGGCCCC----------------CCTGGG------TT--------SCCCHHHHHHHHHHHHHHHHHHSSCSSC
T ss_pred EEEeecccccccCCCc---ceecccCCccccCHHHH------cC--------CCCCCccchHHHHHHHHHHHHhCCCCCC
Confidence 3444 4454444432 24567899999999998 22 122357999999999999999999 997
Q ss_pred HHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHH
Q 008820 91 KELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKC 161 (552)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~ 161 (552)
......+ ...+.............++.+++.+||+.+|.+||++.++.+.
T Consensus 213 ~~~~~~~---------------------~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h 262 (276)
T 2h6d_A 213 DEHVPTL---------------------FKKIRGGVFYIPEYLNRSVATLLMHMLQVDPLKRATIKDIREH 262 (276)
T ss_dssp CSSHHHH---------------------HHHHHHCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred CCcHHHH---------------------HHHhhcCcccCchhcCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 6433311 1111000000111233458999999999999999999887763
No 394
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=99.33 E-value=4.2e-13 Score=128.45 Aligned_cols=117 Identities=19% Similarity=0.133 Sum_probs=77.5
Q ss_pred hhcc--cccccccccchh--hhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-C
Q 008820 14 AKVG--CVGSRICDKEVG--LFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (552)
Q Consensus 14 ~~~~--~~~~~~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-p 88 (552)
.|+. |+++.+...... .......||+.|+|||++ . ...+++++|||||||++|+|++|. |
T Consensus 163 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~------~---------~~~~~~~~Di~slG~il~~l~~g~~~ 227 (298)
T 3pls_A 163 VKVADFGLARDILDREYYSVQQHRHARLPVKWTALESL------Q---------TYRFTTKSDVWSFGVLLWELLTRGAP 227 (298)
T ss_dssp EEECCTTSSCTTTTGGGGCSCCSSCTTCGGGGSCHHHH------T---------TCCCCHHHHHHHHHHHHHHHHHTSCC
T ss_pred EEeCcCCCcccccCCcccccccCcCCCCCccccChhhh------c---------cCCCChhhchhhHHHHHHHHhhCCCC
Confidence 4555 556655444321 224567889999999999 2 356778999999999999999976 5
Q ss_pred c-hHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHH-HhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHHhhh
Q 008820 89 F-TKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYL-LENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELI 166 (552)
Q Consensus 89 f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~~~~ 166 (552)
| .......+. ...... ...........+.+++.+||+.+|.+||++.++.+.+.++.
T Consensus 228 ~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~ 286 (298)
T 3pls_A 228 PYRHIDPFDLT---------------------HFLAQGRRLPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIV 286 (298)
T ss_dssp TTTTSCGGGHH---------------------HHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCccCCHHHHH---------------------HHhhcCCCCCCCccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 4 332222110 000000 00111123345899999999999999999999999888775
No 395
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.32 E-value=2.5e-09 Score=110.69 Aligned_cols=263 Identities=11% Similarity=0.007 Sum_probs=169.5
Q ss_pred CCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCC--CCCCCccccccccCCC
Q 008820 262 GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFS--FPLGHEPLKKWNEEKD 339 (552)
Q Consensus 262 ~~~l~s~s~dg~I~iwd~~~~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~--~~~~~~~~~~~~~~~~ 339 (552)
+.++++...+++|.++|..+++.+.++... ..+..+.|+|++. ++++++.|+.|.+||+. +.+.. .......
T Consensus 167 ~~~~V~~~~~~~V~viD~~t~~v~~~i~~g-~~p~~v~~SpDGr-~lyv~~~dg~V~viD~~~~t~~~v---~~i~~G~- 240 (567)
T 1qks_A 167 NLFSVTLRDAGQIALIDGSTYEIKTVLDTG-YAVHISRLSASGR-YLFVIGRDGKVNMIDLWMKEPTTV---AEIKIGS- 240 (567)
T ss_dssp GEEEEEETTTTEEEEEETTTCCEEEEEECS-SCEEEEEECTTSC-EEEEEETTSEEEEEETTSSSCCEE---EEEECCS-
T ss_pred ceEEEEeCCCCeEEEEECCCCeEEEEEeCC-CCccceEECCCCC-EEEEEcCCCeEEEEECCCCCCcEe---EEEecCC-
Confidence 345667778999999999999999988743 4567999999776 55667789999999995 43322 2222211
Q ss_pred ceeeeEEEEe----eCCCEEEEeeC-CCcEEEEECCCCceeEEecCC-----------CCCeEEEEEe-C-C-EEEEEeC
Q 008820 340 WRYSGIHALT----TSGRYLYTGSG-DRTIKAWSLLDGTLSCTMSGH-----------KSAVSTLAVC-N-G-VLYSGSR 400 (552)
Q Consensus 340 ~~~~~~~~~~----~~~~~l~sgs~-dg~i~iwd~~~~~~~~~~~~h-----------~~~v~~l~~~-~-~-~l~s~~~ 400 (552)
. ..-.+++ |+|+++++++. +++|.++|..+.+.+..+... ...+..+..+ + . +++....
T Consensus 241 -~-P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~ 318 (567)
T 1qks_A 241 -E-ARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKE 318 (567)
T ss_dssp -E-EEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETT
T ss_pred -C-CceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecC
Confidence 1 1234778 69997776654 599999999999998876421 1256777777 2 2 6666777
Q ss_pred CCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEE-CCCcEEEEeCCc--ceeeeec-----ccc-eEEEEE
Q 008820 401 DGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSH-ESGSIKVWRNDK--FMKSMQT-----HKG-SVFAVF 471 (552)
Q Consensus 401 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~-~dg~i~iwd~~~--~~~~~~~-----h~~-~v~~v~ 471 (552)
+|.|.++|..+.+.+............ ...|+|++++++++. .++.|.++|+.+ ....+.. |.+ .+.-+.
T Consensus 319 ~g~v~~vd~~~~~~~~v~~i~~~~~~~-d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~~~ 397 (567)
T 1qks_A 319 TGKILLVDYTDLNNLKTTEISAERFLH-DGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVH 397 (567)
T ss_dssp TTEEEEEETTCSSEEEEEEEECCSSEE-EEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEEEE
T ss_pred CCeEEEEecCCCccceeeeeecccccc-CceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceeeEC
Confidence 899999999876544333322222233 368999999987766 578999999664 3333322 432 222234
Q ss_pred ecCCEE-EEEe-CCCeEEEEecCC-------CeeeeeeccCCCcccCcceEEEEEeCC--eEEEEeC-------CCeEEE
Q 008820 472 LEGKWL-FTGG-WDKTVSVQELAG-------DEFEEDVIPTGAIPCGSVITALLYWQG--KLFVGCA-------DRTVKI 533 (552)
Q Consensus 472 ~~~~~l-~sgs-~dg~i~iwd~~~-------~~~~~~~~~~~~~~~~~~v~~l~~~~~--~l~s~s~-------Dg~v~i 533 (552)
+++..+ +++. .++.|.++|..+ .+........+ ..-..+..+|+ .+++... .+.|.+
T Consensus 398 p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g-----~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v 472 (567)
T 1qks_A 398 PTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALG-----GGSLFIKTHPNSQYLYVDATLNPEAEISGSVAV 472 (567)
T ss_dssp TTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSC-----SCCCCEECCTTCSEEEEECTTCSSHHHHTCEEE
T ss_pred CCCCcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEecCC-----CCCEEEEeCCCCCeEEEecCCCCCcccCceEEE
Confidence 554444 4443 468999999986 23333322211 11122445543 3665442 458999
Q ss_pred EEecC
Q 008820 534 ALCNR 538 (552)
Q Consensus 534 w~~~~ 538 (552)
+|+..
T Consensus 473 ~d~~~ 477 (567)
T 1qks_A 473 FDIKA 477 (567)
T ss_dssp EEGGG
T ss_pred EECCc
Confidence 99874
No 396
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=99.32 E-value=3.6e-13 Score=131.33 Aligned_cols=98 Identities=18% Similarity=0.320 Sum_probs=54.6
Q ss_pred hccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhhhhhhccccCCCchhhhh
Q 008820 34 DFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDYIRCVSTKASDDNIACL 112 (552)
Q Consensus 34 ~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~~~~~~~~~~~~~~~~~~ 112 (552)
...||+.|||||++. + .....+++++|||||||+||+|+||+ ||.......+.
T Consensus 209 ~~~~t~~y~aPE~~~------~------~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~-------------- 262 (337)
T 3ll6_A 209 TRNTTPMYRTPEIID------L------YSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLRIV-------------- 262 (337)
T ss_dssp ---------------------C------CTTSCSSHHHHHHHHHHHHHHHHHSSCCC-----------------------
T ss_pred cccCCCCcCChhhhh------c------cccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHHhh--------------
Confidence 567999999999981 1 01345678999999999999999999 99764433111
Q ss_pred hhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHHhhh
Q 008820 113 GMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELI 166 (552)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~~~~ 166 (552)
... ............+.+++.+||+.+|.+||++.++.+.+..+.
T Consensus 263 -------~~~--~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~ 307 (337)
T 3ll6_A 263 -------NGK--YSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIA 307 (337)
T ss_dssp ------------CCCCTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred -------cCc--ccCCcccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 000 000111223345889999999999999999999999888765
No 397
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.32 E-value=1e-08 Score=106.06 Aligned_cols=288 Identities=10% Similarity=0.074 Sum_probs=184.5
Q ss_pred ceEEEEEc--CCEEEEEeCCCcEEEEeCC--CCeEEEEEeCCCCCeEEEEEe----cCCCCEEEEEcCCCcEEEEeCCCC
Q 008820 254 CVTGLAVG--GGFLFSSSFDKSIHVWSLK--DFSHVHTFKGHDHKVMAVVYV----DEDQPLCISGDSGGGIFVWSFSFP 325 (552)
Q Consensus 254 ~V~~l~~s--~~~l~s~s~dg~I~iwd~~--~~~~~~~~~~h~~~v~~v~~~----~~~~~~l~s~~~dg~i~vwd~~~~ 325 (552)
.+..+.|+ ++++++++.|+.|.+||+. +++.+.++.... ....++|+ |++..++++...++++.++|..+.
T Consensus 198 ~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~-~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~ 276 (567)
T 1qks_A 198 AVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGS-EARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETL 276 (567)
T ss_dssp CEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCS-EEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTC
T ss_pred CccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCC-CCceeEEccccCCCCCEEEEEEccCCeEEEEECCCC
Confidence 56789998 8999999999999999995 888888887644 45799999 588877777778899999998776
Q ss_pred CCCccccccccC-------CCceeeeEEEEeeCCC-EEEEeeCCCcEEEEECCCCcee--EEecCCCCCeEEEEEe-CC-
Q 008820 326 LGHEPLKKWNEE-------KDWRYSGIHALTTSGR-YLYTGSGDRTIKAWSLLDGTLS--CTMSGHKSAVSTLAVC-NG- 393 (552)
Q Consensus 326 ~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~-~l~sgs~dg~i~iwd~~~~~~~--~~~~~h~~~v~~l~~~-~~- 393 (552)
+....+...... ....... ...++++. .++....+|.|.++|..+.+.. ..+. ......++.|+ ++
T Consensus 277 ~~~~~i~~~~~~~~~~~~~p~~rva~-i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~-~~~~~~d~~~~pdgr 354 (567)
T 1qks_A 277 EPKKIQSTRGMTYDEQEYHPEPRVAA-ILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEIS-AERFLHDGGLDGSHR 354 (567)
T ss_dssp CEEEEEECCEECTTTCCEESCCCEEE-EEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEE-CCSSEEEEEECTTSC
T ss_pred cEEEEEeccccccccccccCCCceEE-EEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeee-ccccccCceECCCCC
Confidence 544433321110 0101122 23445444 5666677899999998765432 2222 34456788888 33
Q ss_pred EEEE-EeCCCcEEEEECCCCceeEEEec-C---CCCceEEEEEEcCCCCEEE-EEE-CCCcEEEEeCCc---------ce
Q 008820 394 VLYS-GSRDGTIRLWSLSDHSLLTVLEE-D---SSGAVSSVLSLTAVQHTLV-VSH-ESGSIKVWRNDK---------FM 457 (552)
Q Consensus 394 ~l~s-~~~dg~i~iwd~~~~~~~~~~~~-~---~~~~~~~~~~~s~~~~~l~-~g~-~dg~i~iwd~~~---------~~ 457 (552)
++++ +..+++|.++|+.+++.+..+.. . +.+... ..++|++..++ ++. .++.|.++|... .+
T Consensus 355 ~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~--~~~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv 432 (567)
T 1qks_A 355 YFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGA--NFVHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKIL 432 (567)
T ss_dssp EEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCE--EEEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEE
T ss_pred EEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccce--eeECCCCCcEEEeCCCCCCeEEEecCCCCCCccccCEEE
Confidence 5554 45689999999999998877765 2 222122 23678755444 443 468999998643 44
Q ss_pred eeeecccce-E-EEEEecCCEEEEEeC-------CCeEEEEecCCC-----eeeeeeccC----CCcccCcceEEEEEeC
Q 008820 458 KSMQTHKGS-V-FAVFLEGKWLFTGGW-------DKTVSVQELAGD-----EFEEDVIPT----GAIPCGSVITALLYWQ 519 (552)
Q Consensus 458 ~~~~~h~~~-v-~~v~~~~~~l~sgs~-------dg~i~iwd~~~~-----~~~~~~~~~----~~~~~~~~v~~l~~~~ 519 (552)
+.+...... + ....++++++++... .++|.++|+.+. ......... .-......+..+.|++
T Consensus 433 ~~i~~~g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 512 (567)
T 1qks_A 433 DSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWAGITEGQPRVVQGEFNK 512 (567)
T ss_dssp EEEECSCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGCCCSSSCCCEEEECHHHHHTCCSSCCEEEEEEECT
T ss_pred EEEecCCCCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCcccccccCCCcEEeccccccccCCCCcceEeeeECC
Confidence 555543222 1 334569999988763 459999999865 211011110 0001134688899995
Q ss_pred -C-eEEEEe-----CCCeEEEEEecCCcceeEEEe
Q 008820 520 -G-KLFVGC-----ADRTVKIALCNRQIPEIFSLL 547 (552)
Q Consensus 520 -~-~l~s~s-----~Dg~v~iw~~~~~~~~~~~~~ 547 (552)
+ .++++. .++.|.|+|.. +.+....+.
T Consensus 513 ~G~~~~~s~~~~~~~~~~i~v~D~~-t~~~~~~i~ 546 (567)
T 1qks_A 513 DGTEVWFSVWNGKDQESALVVVDDK-TLELKHVIK 546 (567)
T ss_dssp TSSEEEEEEECCTTSCCEEEEEETT-TTEEEEEEC
T ss_pred CCCEEEEEeecCCCCCCcEEEEECC-CceEEEEeC
Confidence 3 344432 37999999976 455555554
No 398
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=99.32 E-value=4.1e-13 Score=130.56 Aligned_cols=125 Identities=19% Similarity=0.340 Sum_probs=68.8
Q ss_pred hhhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cc
Q 008820 13 VAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QF 89 (552)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf 89 (552)
.+|+. |+++.+..... ......||+.|||||++ .+ ...+++++|||||||+||+|++|+ ||
T Consensus 162 ~~kl~Dfg~~~~~~~~~~--~~~~~~~t~~y~aPE~~------~~--------~~~~~~~~Di~slG~il~~l~~g~~pf 225 (331)
T 4aaa_A 162 VVKLCDFGFARTLAAPGE--VYDDEVATRWYRAPELL------VG--------DVKYGKAVDVWAIGCLVTEMFMGEPLF 225 (331)
T ss_dssp CEEECCCTTC--------------CCCCCTTCCHHHH------TT--------CTTCCTHHHHHHHHHHHHHHHHSSCSC
T ss_pred cEEEEeCCCceeecCCcc--ccCCCcCCccccCcccc------cC--------CCCcchHHHHHHHHHHHHHHHhCCCCC
Confidence 35555 45555443322 25667899999999998 22 235678999999999999999999 99
Q ss_pred hHHHhhhh-h---hccccCCCchhhhhhhhHHHHHHHHHH-------------HhhhhcCccccHHHHHHhhcccCCCCC
Q 008820 90 TKELIDYI-R---CVSTKASDDNIACLGMYMAWMEKVTYL-------------LENKFGSEFVSLQLMFCQCLNFDPGCR 152 (552)
Q Consensus 90 ~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~l~~~~~~~l~~~p~~R 152 (552)
........ . .......+..+. .....+.. .....+.....+.+++.+||+.+|.+|
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R 298 (331)
T 4aaa_A 226 PGDSDIDQLYHIMMCLGNLIPRHQE-------LFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKR 298 (331)
T ss_dssp CCSSHHHHHHHHHHHHCSCCHHHHH-------HHHHCGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGS
T ss_pred CCCCcHHHHHHHHHHhCCCChhhhh-------HhhhccccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccC
Confidence 55332211 0 000000000000 00000000 000111234458999999999999999
Q ss_pred cchhhHHH
Q 008820 153 PLLTNVWK 160 (552)
Q Consensus 153 ~~~~~~~~ 160 (552)
|++.++.+
T Consensus 299 pt~~ell~ 306 (331)
T 4aaa_A 299 PFCAELLH 306 (331)
T ss_dssp CCGGGGGG
T ss_pred CCHHHHhc
Confidence 99987655
No 399
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=99.32 E-value=6.5e-13 Score=126.13 Aligned_cols=110 Identities=14% Similarity=0.083 Sum_probs=76.3
Q ss_pred hhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cch
Q 008820 14 AKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFT 90 (552)
Q Consensus 14 ~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~ 90 (552)
.|+. |+++.+..... .....||+.|+|||++ . ...+++++|||||||+||+|++|. ||.
T Consensus 161 ~kl~Dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~------~---------~~~~~~~~Di~slG~il~~l~~~~~~~~ 222 (284)
T 2a19_B 161 VKIGDFGLVTSLKNDGK---RTRSKGTLRYMSPEQI------S---------SQDYGKEVDLYALGLILAELLHVCDTAF 222 (284)
T ss_dssp EEECCCTTCEESSCCSC---CCCCCSCCTTSCHHHH------H---------CSCCCTHHHHHHHHHHHHHHHSCCSSHH
T ss_pred EEECcchhheecccccc---ccccCCcccccChhhh------c---------cCCCcchhhhHHHHHHHHHHHhcCCcch
Confidence 4555 44555544322 4567899999999998 2 245678999999999999999999 885
Q ss_pred HHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHHhhh
Q 008820 91 KELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELI 166 (552)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~~~~ 166 (552)
..... . ..... ..........+.+++.+||+.+|.+||++.++.+.+..+.
T Consensus 223 ~~~~~-~------------------~~~~~------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~ 273 (284)
T 2a19_B 223 ETSKF-F------------------TDLRD------GIISDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWK 273 (284)
T ss_dssp HHHHH-H------------------HHHHT------TCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHT
T ss_pred hHHHH-H------------------HHhhc------ccccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHh
Confidence 53211 0 00000 0001112335889999999999999999999999887764
No 400
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=99.32 E-value=2.2e-13 Score=129.91 Aligned_cols=93 Identities=13% Similarity=0.168 Sum_probs=64.8
Q ss_pred hhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhhhhhhccccCCCchhh
Q 008820 32 LSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDYIRCVSTKASDDNIA 110 (552)
Q Consensus 32 ~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~~~~~~~~~~~~~~~~ 110 (552)
.....||+.|+|||++ .+.++.++|||||||+||+|++|+ ||.......
T Consensus 187 ~~~~~~t~~y~aPE~~----------------~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~-------------- 236 (290)
T 1t4h_A 187 AKAVIGTPEFMAPEMY----------------EEKYDESVDVYAFGMCMLEMATSEYPYSECQNAA-------------- 236 (290)
T ss_dssp BEESCSSCCCCCGGGG----------------GTCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHH--------------
T ss_pred cccccCCcCcCCHHHH----------------hccCCCcchHHHHHHHHHHHHhCCCCCCCcCcHH--------------
Confidence 4567899999999988 234678999999999999999999 996522110
Q ss_pred hhhhhHHHHHHHHH--HHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 111 CLGMYMAWMEKVTY--LLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 111 ~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
........ .+........+++.+++.+||+.+|.+||++.++.+
T Consensus 237 ------~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 282 (290)
T 1t4h_A 237 ------QIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp ------HHHHHHTTTCCCGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ------HHHHHHhccCCccccCCCCCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 00000000 011111223346899999999999999999887655
No 401
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=99.32 E-value=3.7e-13 Score=132.74 Aligned_cols=120 Identities=17% Similarity=0.149 Sum_probs=70.3
Q ss_pred hhhcc--cccccccccchh--hhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhh-CC
Q 008820 13 VAKVG--CVGSRICDKEVG--LFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE 87 (552)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~llt-g~ 87 (552)
.+|+. |+++.+...... .......||+.|||||++. ...+++++|||||||+||||+| |.
T Consensus 230 ~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~---------------~~~~~~~~DvwSlG~il~ellt~~~ 294 (373)
T 3c1x_A 230 TVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ---------------TQKFTTKSDVWSFGVLLWELMTRGA 294 (373)
T ss_dssp CEEECCC---------------------CCGGGSCHHHHH---------------HCCCCHHHHHHHHHHHHHHHHTTSC
T ss_pred CEEEeeccccccccccccccccccCCCCCcccccChHHhc---------------CCCCCcHHHHHHHHHHHHHHHhCcC
Confidence 35666 566665544321 1245677899999999992 2456789999999999999999 56
Q ss_pred -CchHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHHhhh
Q 008820 88 -QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELI 166 (552)
Q Consensus 88 -pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~~~~ 166 (552)
||.......+. ...... ............+.+++.+||+.+|.+||++.++.+.+..+.
T Consensus 295 ~p~~~~~~~~~~-----------------~~~~~~---~~~~~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~ 354 (373)
T 3c1x_A 295 PPYPDVNTFDIT-----------------VYLLQG---RRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIF 354 (373)
T ss_dssp CSCTTSCSSCHH-----------------HHHHTT---CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHH-----------------HHHHcC---CCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 88653322110 000000 000011123345899999999999999999999999988876
Q ss_pred c
Q 008820 167 I 167 (552)
Q Consensus 167 ~ 167 (552)
.
T Consensus 355 ~ 355 (373)
T 3c1x_A 355 S 355 (373)
T ss_dssp H
T ss_pred H
Confidence 3
No 402
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=99.32 E-value=3e-13 Score=131.29 Aligned_cols=99 Identities=16% Similarity=0.115 Sum_probs=68.8
Q ss_pred hhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhh-CC-CchHHHhhhhhhccccCCCchhh
Q 008820 33 SDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE-QFTKELIDYIRCVSTKASDDNIA 110 (552)
Q Consensus 33 ~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~llt-g~-pf~~~~~~~~~~~~~~~~~~~~~ 110 (552)
....||+.|+|||++. ...+++++|||||||+||||+| |+ ||.......+.
T Consensus 199 ~~~~~~~~y~aPE~~~---------------~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~------------ 251 (327)
T 1fvr_A 199 TMGRLPVRWMAIESLN---------------YSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELY------------ 251 (327)
T ss_dssp ----CCTTTCCHHHHH---------------HCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHH------------
T ss_pred cCCCCCccccChhhhc---------------cccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHHHH------------
Confidence 4456799999999982 2446789999999999999998 99 99764433111
Q ss_pred hhhhhHHHHHHHHHH-HhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHHhhhc
Q 008820 111 CLGMYMAWMEKVTYL-LENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELII 167 (552)
Q Consensus 111 ~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~~~~~ 167 (552)
..+... ...........+.+++.+||+.+|.+||++.++.+.+..++.
T Consensus 252 ---------~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 300 (327)
T 1fvr_A 252 ---------EKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLE 300 (327)
T ss_dssp ---------HHGGGTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ---------HHhhcCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 000000 000111233458999999999999999999999999988764
No 403
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=99.32 E-value=4.5e-13 Score=130.94 Aligned_cols=130 Identities=9% Similarity=0.092 Sum_probs=77.1
Q ss_pred hhcc--cccccccccchh--hhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhC---
Q 008820 14 AKVG--CVGSRICDKEVG--LFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIG--- 86 (552)
Q Consensus 14 ~~~~--~~~~~~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg--- 86 (552)
+|+. |+++.+...... .......||+.|+|||++ .+.. ......++.++|||||||+||||+||
T Consensus 186 ~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~------~~~~---~~~~~~~~~~~Di~slG~il~el~tg~~~ 256 (342)
T 1b6c_B 186 CCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVL------DDSI---NMKHFESFKRADIYAMGLVFWEIARRCSI 256 (342)
T ss_dssp EEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHH------TSCC---CTTCHHHHHHHHHHHHHHHHHHHHTTBCB
T ss_pred EEEEECCCceeccccccccccccccCCcCcccCCHhhh------cccc---cccccccCCcccHHHHHHHHHHHHhccCc
Confidence 4555 555554443221 124567899999999999 2200 00011344789999999999999999
Q ss_pred -------C-CchHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHH------HHhhh-hcCccccHHHHHHhhcccCCCC
Q 008820 87 -------E-QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTY------LLENK-FGSEFVSLQLMFCQCLNFDPGC 151 (552)
Q Consensus 87 -------~-pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~-~~~~~~~l~~~~~~~l~~~p~~ 151 (552)
+ ||........ ....+...+.. .+... .......+.+++.+||+.+|.+
T Consensus 257 ~~~~~~~~~p~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~ 320 (342)
T 1b6c_B 257 GGIHEDYQLPYYDLVPSDP----------------SVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAA 320 (342)
T ss_dssp TTBCCCCCCTTTTTSCSSC----------------CHHHHHHHHTTSCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGG
T ss_pred CCcccccccCccccCcCcc----------------cHHHHHHHHHHHHhCCCCcccccchhHHHHHHHHHHHHhccChhh
Confidence 7 7754221100 00001110000 00000 0001124889999999999999
Q ss_pred CcchhhHHHHHHhhhcC
Q 008820 152 RPLLTNVWKCIRELIIK 168 (552)
Q Consensus 152 R~~~~~~~~~l~~~~~~ 168 (552)
||++.++.+.+.++...
T Consensus 321 Rps~~~i~~~L~~i~~~ 337 (342)
T 1b6c_B 321 RLTALRIKKTLSQLSQQ 337 (342)
T ss_dssp SCCHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHHH
Confidence 99999999999887644
No 404
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=99.32 E-value=1e-13 Score=131.35 Aligned_cols=92 Identities=22% Similarity=0.316 Sum_probs=46.4
Q ss_pred hhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhhhhhhccccCCCchhhh
Q 008820 33 SDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDYIRCVSTKASDDNIAC 111 (552)
Q Consensus 33 ~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~~~~~~~~~~~~~~~~~ 111 (552)
....||+.|+|||++. ....++++|||||||+||+|++|+ ||......... ... ..
T Consensus 170 ~~~~~~~~y~aPE~~~---------------~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~--~~~-~~----- 226 (278)
T 3cok_A 170 YTLCGTPNYISPEIAT---------------RSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTL--NKV-VL----- 226 (278)
T ss_dssp -------------------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-------C-CS-----
T ss_pred eeccCCCCcCCcchhc---------------CCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHH--HHH-hh-----
Confidence 4578999999999982 244568999999999999999999 99764332110 000 00
Q ss_pred hhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 112 LGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
. ..........++.+++.+||+.+|.+||++.++.+
T Consensus 227 -~------------~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 262 (278)
T 3cok_A 227 -A------------DYEMPSFLSIEAKDLIHQLLRRNPADRLSLSSVLD 262 (278)
T ss_dssp -S------------CCCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred -c------------ccCCccccCHHHHHHHHHHcccCHhhCCCHHHHhc
Confidence 0 00001112335889999999999999999877554
No 405
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=99.32 E-value=3.7e-13 Score=136.45 Aligned_cols=114 Identities=16% Similarity=0.199 Sum_probs=75.9
Q ss_pred hhhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhh-CC-C
Q 008820 13 VAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE-Q 88 (552)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~llt-g~-p 88 (552)
.+|+. |+++..... .....||+.|||||++ . ...++.++|||||||+||||+| |+ |
T Consensus 327 ~~kl~DfG~a~~~~~~-----~~~~~~~~~y~aPE~~------~---------~~~~~~~sDvwslG~~l~el~t~g~~P 386 (450)
T 1k9a_A 327 VAKVSDFGLTKEASST-----QDTGKLPVKWTAPEAL------R---------EKKFSTKSDVWSFGILLWEIYSFGRVP 386 (450)
T ss_dssp CEEECCCTTCEECC-----------CCCTTTSCHHHH------H---------SSCCCHHHHHHHHHHHHHHHHTTTCCS
T ss_pred CEEEeeCCCccccccc-----ccCCCCCcceeCHHHh------c---------CCCCCcHHHHHHHHHHHHHHHhCCCCC
Confidence 45666 566544332 2334789999999999 2 2557789999999999999998 99 9
Q ss_pred chHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHHhhh
Q 008820 89 FTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELI 166 (552)
Q Consensus 89 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~~~~ 166 (552)
|.......+. ...... ............+.+++.+|++.+|.+||++.++.+.+..+.
T Consensus 387 ~~~~~~~~~~-----------------~~i~~~---~~~~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~ 444 (450)
T 1k9a_A 387 YPRIPLKDVV-----------------PRVEKG---YKMDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIR 444 (450)
T ss_dssp STTSCTTTHH-----------------HHHHTT---CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCCCHHHHH-----------------HHHHcC---CCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence 9764333110 000000 000111223456999999999999999999999999887764
No 406
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=99.32 E-value=4.5e-13 Score=141.21 Aligned_cols=118 Identities=14% Similarity=0.132 Sum_probs=75.3
Q ss_pred hhhcc--cccccccccch-hhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhh-CC-
Q 008820 13 VAKVG--CVGSRICDKEV-GLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE- 87 (552)
Q Consensus 13 ~~~~~--~~~~~~~~~~~-~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~llt-g~- 87 (552)
.+|+. |+|+.+...+. ........||+.|||||++. ...++.++|||||||+||||+| |+
T Consensus 507 ~~kL~DFGla~~~~~~~~~~~~~~~~~~t~~y~APE~~~---------------~~~~~~~sDvwSlGv~l~ellt~G~~ 571 (635)
T 4fl3_A 507 YAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECIN---------------YYKFSSKSDVWSFGVLMWEAFSYGQK 571 (635)
T ss_dssp EEEECCTTHHHHTTC-------------CGGGSCHHHHH---------------HCCCCHHHHHHHHHHHHHHHHTTTCC
T ss_pred CEEEEEcCCccccccCccccccccCCCCceeeeChhhhc---------------CCCCCcHHHHHHHHHHHHHHHhCCCC
Confidence 46666 66666654432 22345567899999999992 2457789999999999999998 99
Q ss_pred CchHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHH-HhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHHhhh
Q 008820 88 QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYL-LENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELI 166 (552)
Q Consensus 88 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~~~~ 166 (552)
||.+.....+. ..+... ..........++.+++.+||+.+|.+||++.++.+.+..+.
T Consensus 572 Pf~~~~~~~~~---------------------~~i~~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~ 630 (635)
T 4fl3_A 572 PYRGMKGSEVT---------------------AMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYY 630 (635)
T ss_dssp SSTTCCHHHHH---------------------HHHHTTCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHH
T ss_pred CCCCCCHHHHH---------------------HHHHcCCCCCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHH
Confidence 99764433111 000000 00111123445899999999999999999999998887754
No 407
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=99.32 E-value=3.6e-13 Score=128.40 Aligned_cols=117 Identities=15% Similarity=0.171 Sum_probs=74.8
Q ss_pred hhcc--cccccccccchh-hhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhh-CC-C
Q 008820 14 AKVG--CVGSRICDKEVG-LFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE-Q 88 (552)
Q Consensus 14 ~~~~--~~~~~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~llt-g~-p 88 (552)
.|+. |+++.+...... .......||+.|+|||++. ...+++++|||||||+||+|++ |+ |
T Consensus 160 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~---------------~~~~~~~~Di~slG~il~~l~~~g~~p 224 (291)
T 1u46_A 160 VKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLK---------------TRTFSHASDTWMFGVTLWEMFTYGQEP 224 (291)
T ss_dssp EEECCCTTCEECCC-CCEEEC-----CCGGGCCHHHHH---------------HCEEEHHHHHHHHHHHHHHHHTTSCCT
T ss_pred EEEccccccccccccccchhhhccCCCCceeeCchhhc---------------CCCCCchhhHHHHHHHHHHHHhCCCCC
Confidence 4455 455555433221 2345667899999999982 2446689999999999999999 99 9
Q ss_pred chHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHH--HhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHHhhh
Q 008820 89 FTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYL--LENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELI 166 (552)
Q Consensus 89 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~~~~ 166 (552)
|.......+. ...... ..........++.+++.+||+.+|.+||++.++.+.+.++.
T Consensus 225 ~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~ 283 (291)
T 1u46_A 225 WIGLNGSQIL---------------------HKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQ 283 (291)
T ss_dssp TTTCCHHHHH---------------------HHHHTSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC
T ss_pred cccCCHHHHH---------------------HHHHccCCCCCCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhC
Confidence 9664333110 000000 00011123445899999999999999999999999888764
No 408
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.31 E-value=3.5e-08 Score=93.65 Aligned_cols=277 Identities=11% Similarity=0.024 Sum_probs=172.8
Q ss_pred EEEEeecCccceEEEEEc--CCEEEEEeCCCcEEEEeCCCCeEEE-EEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEE
Q 008820 244 KFKDLQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVH-TFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVW 320 (552)
Q Consensus 244 ~~~~l~~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~~~~~-~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vw 320 (552)
.-+.+......+.+++++ ++..++...++.|.+||.. ++... .+..+...+.++++.+++. +.++...++.|..|
T Consensus 11 ~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~v~~~ 88 (300)
T 2qc5_A 11 EEFNLSIPDSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGD-IWFTENGANKIGKL 88 (300)
T ss_dssp EEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSC-EEEEETTTTEEEEE
T ss_pred EEEecCCCCCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCC-EEEEecCCCeEEEE
Confidence 334455566788999998 6766666678999999987 55443 2233446789999987654 66666667889999
Q ss_pred eCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCceeE-EecCCCCCeEEEEEe-CC-EEEE
Q 008820 321 SFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSC-TMSGHKSAVSTLAVC-NG-VLYS 397 (552)
Q Consensus 321 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~-~~~~h~~~v~~l~~~-~~-~l~s 397 (552)
|.. +.. ..... ... . ......++.++++.+++...++.|..+|.. ++... .+......+.++++. ++ +.++
T Consensus 89 d~~-g~~-~~~~~-~~~-~-~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~ 162 (300)
T 2qc5_A 89 SKK-GGF-TEYPL-PQP-D-SGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFT 162 (300)
T ss_dssp CTT-SCE-EEEEC-SST-T-CCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEE
T ss_pred CCC-CCe-EEecC-CCC-C-CCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEE
Confidence 876 322 11111 101 1 112233556777777776667899999987 65543 233345678899998 44 4444
Q ss_pred EeCCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEECCCcEEEEeCCcceeee--ecccceEEEEEe--c
Q 008820 398 GSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDKFMKSM--QTHKGSVFAVFL--E 473 (552)
Q Consensus 398 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~~~~~~~--~~h~~~v~~v~~--~ 473 (552)
...++.|..+|. +++... +...........+++++++++.++....+.|.+||.......+ ..+...+.++.+ +
T Consensus 163 ~~~~~~i~~~~~-~g~~~~-~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~d~~ 240 (300)
T 2qc5_A 163 ENQNNSIGRITN-TGKLEE-YPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITTTGEISEYDIPTPNARPHAITAGKN 240 (300)
T ss_dssp ETTTTEEEEECT-TCCEEE-EECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECTTCCEEEEECSSTTCCEEEEEECST
T ss_pred ecCCCeEEEECC-CCcEEE-eeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcCCCcEEEEECCCCCCCceEEEECCC
Confidence 445788999998 555443 3322222223346888999877766667789999974333322 233455667766 6
Q ss_pred CCEEEEEeCCCeEEEEecCCCeeeeeeccCCCcccCcceEEEEEe-CCeEEEEeCCCeEEEEEe
Q 008820 474 GKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYW-QGKLFVGCADRTVKIALC 536 (552)
Q Consensus 474 ~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~-~~~l~s~s~Dg~v~iw~~ 536 (552)
|+..++...++.|..||.. +......... ....+.+++.+ ++.++.++.. .|..++.
T Consensus 241 g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~----~~~~~~~i~~~~~g~l~v~~~~-~i~~~~p 298 (300)
T 2qc5_A 241 SEIWFTEWGANQIGRITND-NTIQEYQLQT----ENAEPHGITFGKDGSVWFALKC-KIGKLNL 298 (300)
T ss_dssp TCEEEEETTTTEEEEECTT-SCEEEEECCS----TTCCCCCEEECTTSCEEEECSS-EEEEEEE
T ss_pred CCEEEeccCCCeEEEECCC-CcEEEEECCc----cCCccceeEeCCCCCEEEEccC-ceEEeCC
Confidence 7766666567899999984 4333221111 12346777887 4667777764 5655554
No 409
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=99.31 E-value=2.7e-13 Score=128.21 Aligned_cols=115 Identities=19% Similarity=0.270 Sum_probs=71.4
Q ss_pred hhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cch
Q 008820 14 AKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFT 90 (552)
Q Consensus 14 ~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~ 90 (552)
.|+. |+++.+.............||+.|+|||++ .+ ....+.++|||||||++|+|++|+ ||.
T Consensus 144 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~------~~--------~~~~~~~~Di~slG~il~~l~~g~~p~~ 209 (276)
T 2yex_A 144 LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL------KR--------REFHAEPVDVWSCGIVLTAMLAGELPWD 209 (276)
T ss_dssp EEECCCTTCEECEETTEECCBCCCCSCGGGCCGGGG------TC--------SSBCHHHHHHHHHHHHHHHHHHSSCCCS
T ss_pred EEEeeCCCccccCCCcchhcccCCccccCccChHHH------hc--------CCCCCCcchHHHHHHHHHHHHhCCCCCC
Confidence 3444 444444332222235678899999999998 22 122357899999999999999999 996
Q ss_pred HHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 91 KELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
........ ...+..... ...........+.+++.+||+.+|.+||++.++.+
T Consensus 210 ~~~~~~~~----------------~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 261 (276)
T 2yex_A 210 QPSDSCQE----------------YSDWKEKKT--YLNPWKKIDSAPLALLHKILVENPSARITIPDIKK 261 (276)
T ss_dssp CSCTTSHH----------------HHHHHTTCT--TSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred CCchHHHH----------------HHHhhhccc--ccCchhhcCHHHHHHHHHHCCCCchhCCCHHHHhc
Confidence 53322000 000000000 00111123445889999999999999999877554
No 410
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=99.31 E-value=3.4e-13 Score=130.88 Aligned_cols=98 Identities=15% Similarity=0.184 Sum_probs=61.3
Q ss_pred hhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhhhhhhccccCCCchhh
Q 008820 32 LSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDYIRCVSTKASDDNIA 110 (552)
Q Consensus 32 ~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~~~~~~~~~~~~~~~~ 110 (552)
.....||+.|+|||++..... ....+++++|||||||+||+|++|+ ||........
T Consensus 186 ~~~~~~~~~y~aPE~~~~~~~----------~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~------------- 242 (326)
T 2x7f_A 186 RNTFIGTPYWMAPEVIACDEN----------PDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRA------------- 242 (326)
T ss_dssp -----CCGGGCCHHHHC------------------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHH-------------
T ss_pred cccccCCccccChhhhccccc----------cCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHH-------------
Confidence 456789999999999821100 1345678999999999999999999 9965332210
Q ss_pred hhhhhHHHHHHHHHHHhh--hhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 111 CLGMYMAWMEKVTYLLEN--KFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
.......+.. ........+.+++.+||..+|.+||++.++.+
T Consensus 243 --------~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 286 (326)
T 2x7f_A 243 --------LFLIPRNPAPRLKSKKWSKKFQSFIESCLVKNHSQRPATEQLMK 286 (326)
T ss_dssp --------HHHHHHSCCCCCSCSCSCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred --------HHHhhcCccccCCccccCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 0001110100 11123446999999999999999999887765
No 411
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=99.31 E-value=4.6e-13 Score=128.13 Aligned_cols=118 Identities=16% Similarity=0.120 Sum_probs=75.4
Q ss_pred hhcc--cccccccccch--hhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC--
Q 008820 14 AKVG--CVGSRICDKEV--GLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-- 87 (552)
Q Consensus 14 ~~~~--~~~~~~~~~~~--~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-- 87 (552)
+|+. |+++.+..... ........||+.|+|||++. ...+++++|||||||++|+|++|.
T Consensus 167 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~---------------~~~~~~~~Di~slG~il~~l~~~~~~ 231 (298)
T 3f66_A 167 VKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ---------------TQKFTTKSDVWSFGVLLWELMTRGAP 231 (298)
T ss_dssp EEECSCGGGCCCSCGGGCBC-----CCBCGGGSCHHHHH---------------HCCCCHHHHHHHHHHHHHHHHTTSCC
T ss_pred EEECcccccccccccchhccccccCCCCCccccChHHhc---------------CCCCChHHHHHHHHHHHHHHHhCCCC
Confidence 4555 55655544332 12355678899999999992 245678999999999999999955
Q ss_pred CchHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHHhhh
Q 008820 88 QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELI 166 (552)
Q Consensus 88 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~~~~ 166 (552)
||.......+. ...... ............+.+++.+||+.+|.+||++.++.+.+..+.
T Consensus 232 ~~~~~~~~~~~-----------------~~~~~~---~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~ 290 (298)
T 3f66_A 232 PYPDVNTFDIT-----------------VYLLQG---RRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIF 290 (298)
T ss_dssp SSTTSCTTTHH-----------------HHHHTT---CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCccCCHHHHH-----------------HHHhcC---CCCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 66543322110 000000 000011112345899999999999999999999999988876
No 412
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=99.31 E-value=6.7e-13 Score=133.90 Aligned_cols=124 Identities=15% Similarity=0.226 Sum_probs=68.7
Q ss_pred hhhcc--cccccccccchh--hhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhh-CC
Q 008820 13 VAKVG--CVGSRICDKEVG--LFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE 87 (552)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~llt-g~ 87 (552)
.+|++ |+++.+...... .......||+.|||||++ .+.. .......++.++|||||||+||||+| |+
T Consensus 166 ~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~------~~~~--~~~~~~~~~~~~DiwSlG~il~ellt~g~ 237 (434)
T 2rio_A 166 RILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELL------EESN--NLQTKRRLTRSIDIFSMGCVFYYILSKGK 237 (434)
T ss_dssp EEEECCCTTCEECCC--------------CCTTSCHHHH------SCCC--TTSCCCCCCTHHHHHHHHHHHHHHHTTSC
T ss_pred EEEEcccccceecCCCCccceeeecCCCCCCCccCHHHh------cccc--ccccccCcchhhhhHhHHHHHHHHHhCCC
Confidence 45666 667666554321 124567899999999999 2200 00112567889999999999999999 89
Q ss_pred -CchHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 88 -QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 88 -pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
||..........+........... ... .. ...++.+++.+||+.+|.+||++.++.+
T Consensus 238 ~Pf~~~~~~~~~i~~~~~~~~~~~~------~~~--~~--------~~~~~~~li~~~L~~dP~~Rps~~eil~ 295 (434)
T 2rio_A 238 HPFGDKYSRESNIIRGIFSLDEMKC------LHD--RS--------LIAEATDLISQMIDHDPLKRPTAMKVLR 295 (434)
T ss_dssp CTTCSTTTHHHHHHHTCCCCCCCTT------CCC--HH--------HHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred CCCCCchhhHHHHhcCCCCcccccc------ccc--cc--------chHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence 996532221100011000000000 000 00 1124889999999999999999887654
No 413
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=99.30 E-value=6.9e-13 Score=131.69 Aligned_cols=122 Identities=14% Similarity=0.175 Sum_probs=74.3
Q ss_pred hhhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cc
Q 008820 13 VAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QF 89 (552)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf 89 (552)
..|+. |+|+.+...+. .....||+.|||||++ .| ...++.++|||||||+||||++|+ ||
T Consensus 180 ~~kl~Dfg~a~~~~~~~~---~~~~~~t~~y~aPE~~------~~--------~~~~~~~~DiwslG~il~ell~g~~pf 242 (383)
T 3eb0_A 180 TLKLCDFGSAKKLIPSEP---SVAYICSRFYRAPELM------LG--------ATEYTPSIDLWSIGCVFGELILGKPLF 242 (383)
T ss_dssp EEEECCCTTCEECCTTSC---CCCCCCCSSCCCHHHH------TT--------CSSCCTHHHHHHHHHHHHHHHHSSCSS
T ss_pred cEEEEECCCCcccCCCCC---CcCcccCCCccCHHHh------cC--------CCCCCcchhhhhHHHHHHHHHhCCCCC
Confidence 35555 56665554433 4567899999999998 22 234678999999999999999999 99
Q ss_pred hHHHhhh-h---hhccccCCCchhhhhhhhHHHHHHHHH-------------HHhhhhcCccccHHHHHHhhcccCCCCC
Q 008820 90 TKELIDY-I---RCVSTKASDDNIACLGMYMAWMEKVTY-------------LLENKFGSEFVSLQLMFCQCLNFDPGCR 152 (552)
Q Consensus 90 ~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~l~~~~~~~l~~~p~~R 152 (552)
.+..... + ....+.... ..+....+. ............+.+++.+||+.+|.+|
T Consensus 243 ~~~~~~~~~~~i~~~~g~p~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R 313 (383)
T 3eb0_A 243 SGETSIDQLVRIIQIMGTPTK---------EQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLR 313 (383)
T ss_dssp CCSSHHHHHHHHHHHHCCCCH---------HHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGS
T ss_pred CCCChHHHHHHHHHHhCCCCH---------HHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhC
Confidence 6543221 1 100010000 000000000 0000011133458899999999999999
Q ss_pred cchhhHHH
Q 008820 153 PLLTNVWK 160 (552)
Q Consensus 153 ~~~~~~~~ 160 (552)
|++.++.+
T Consensus 314 ~t~~e~l~ 321 (383)
T 3eb0_A 314 INPYEAMA 321 (383)
T ss_dssp CCHHHHHT
T ss_pred CCHHHHhc
Confidence 99887654
No 414
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=99.30 E-value=5.4e-13 Score=140.21 Aligned_cols=118 Identities=15% Similarity=0.088 Sum_probs=75.5
Q ss_pred hhhcc--cccccccccch-hhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhh-CC-
Q 008820 13 VAKVG--CVGSRICDKEV-GLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE- 87 (552)
Q Consensus 13 ~~~~~--~~~~~~~~~~~-~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~llt-g~- 87 (552)
.+|+. |+++.+..... ........||+.|||||++. ...++.++|||||||+||||+| |+
T Consensus 474 ~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~y~APE~~~---------------~~~~~~~sDvwSlGv~l~ellt~G~~ 538 (613)
T 2ozo_A 474 YAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECIN---------------FRKFSSRSDVWSYGVTMWEALSYGQK 538 (613)
T ss_dssp EEEECCCSTTTTCC--------------CCTTSCHHHHH---------------HCCCCHHHHHHHHHHHHHHHHTTSCC
T ss_pred cEEEeeccCcccccCCCceeeeccCCCCccceeCHhhhc---------------CCCCCcHHHHHHHHHHHHHHHHCCCC
Confidence 46676 67776654332 11233445679999999992 2457789999999999999998 99
Q ss_pred CchHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHH-HhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHHhhh
Q 008820 88 QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYL-LENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELI 166 (552)
Q Consensus 88 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~~~~ 166 (552)
||.......+. ..+..- ..........++.+++.+|++.+|.+||++.++.+.+..++
T Consensus 539 Pf~~~~~~~~~---------------------~~i~~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~ 597 (613)
T 2ozo_A 539 PYKKMKGPEVM---------------------AFIEQGKRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACY 597 (613)
T ss_dssp TTTTCCSHHHH---------------------HHHHTTCCCCCCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHH
T ss_pred CCCCCCHHHHH---------------------HHHHcCCCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence 99764333110 000000 00111123456999999999999999999999999888765
No 415
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=99.30 E-value=5.6e-13 Score=128.61 Aligned_cols=109 Identities=17% Similarity=0.201 Sum_probs=71.7
Q ss_pred hhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cch
Q 008820 14 AKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFT 90 (552)
Q Consensus 14 ~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~ 90 (552)
.|+. |+++.+..... ......||+.|+|||++ . ...++.++|||||||+||+|++|+ ||.
T Consensus 164 ~kl~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~------~---------~~~~~~~~Di~slG~il~~l~~g~~p~~ 226 (314)
T 3com_A 164 AKLADFGVAGQLTDTMA--KRNTVIGTPFWMAPEVI------Q---------EIGYNCVADIWSLGITAIEMAEGKPPYA 226 (314)
T ss_dssp EEECCCTTCEECBTTBS--CBCCCCSCGGGCCHHHH------S---------SSCBCTTHHHHHHHHHHHHHHHSSCTTT
T ss_pred EEEeecccchhhhhhcc--ccCccCCCCCccChhhc------C---------CCCCCccccHHHHHHHHHHHHhCCCCCC
Confidence 4455 44544443322 24567899999999999 3 245778999999999999999999 996
Q ss_pred HHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHh---hhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 91 KELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLE---NKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
........ ........ .........+.+++.+||+.+|.+||++.++.+
T Consensus 227 ~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~ 278 (314)
T 3com_A 227 DIHPMRAI---------------------FMIPTNPPPTFRKPELWSDNFTDFVKQCLVKSPEQRATATQLLQ 278 (314)
T ss_dssp TSCHHHHH---------------------HHHHHSCCCCCSSGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred CCChHHHH---------------------HHHhcCCCcccCCcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 53322100 00000000 001112345899999999999999999887655
No 416
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=99.30 E-value=1.1e-12 Score=128.74 Aligned_cols=114 Identities=16% Similarity=0.176 Sum_probs=64.9
Q ss_pred hhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhhhh-h---hccccCCC
Q 008820 32 LSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDYI-R---CVSTKASD 106 (552)
Q Consensus 32 ~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~~~-~---~~~~~~~~ 106 (552)
.+...||+.|||||++ .+ ...++.++|||||||+||+|++|+ ||.+.....+ . ...+. .+
T Consensus 180 ~~~~~~t~~y~aPE~~------~~--------~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~-~~ 244 (353)
T 3coi_A 180 MTGYVVTRWYRAPEVI------LS--------WMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGV-PG 244 (353)
T ss_dssp ----CCSBCCSCHHHH------SC--------CSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCB-CC
T ss_pred ccccccCcCcCCHHHH------hC--------cCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCC-CC
Confidence 4567899999999998 22 245678999999999999999999 9965432211 1 00000 00
Q ss_pred chhhhhhhhHHHHHHHHHHHh-------hhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 107 DNIACLGMYMAWMEKVTYLLE-------NKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
..|................+. .........+.+++.+||+.+|.+||++.++.+
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~ 305 (353)
T 3coi_A 245 TEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT 305 (353)
T ss_dssp HHHHTTCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred HHHHHHHhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 011000000000000000000 001123456999999999999999999887654
No 417
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=99.30 E-value=8.2e-13 Score=136.79 Aligned_cols=117 Identities=21% Similarity=0.207 Sum_probs=81.0
Q ss_pred hhhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhh-CC-C
Q 008820 13 VAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE-Q 88 (552)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~llt-g~-p 88 (552)
.+|+. |+++.+...... ......||+.|||||++. ...++.++|||||||+||||+| |+ |
T Consensus 401 ~~kl~DFG~a~~~~~~~~~-~~~~~~~~~~y~aPE~~~---------------~~~~~~~sDvwSlGv~l~el~t~g~~P 464 (535)
T 2h8h_A 401 VCKVADFGLARLIEDNEYT-ARQGAKFPIKWTAPEAAL---------------YGRFTIKSDVWSFGILLTELTTKGRVP 464 (535)
T ss_dssp CEEECCTTSTTTCCCHHHH-TTCSTTSCGGGSCHHHHH---------------HCCCCHHHHHHHHHHHHHHHTTTTCCS
T ss_pred cEEEcccccceecCCCcee-cccCCcCcccccCHHHhc---------------cCCCCchhhHHHHHHHHHHHHhCCCCC
Confidence 45666 667766654322 345567899999999982 2456789999999999999999 89 9
Q ss_pred chHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHH-HhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHHhhh
Q 008820 89 FTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYL-LENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELI 166 (552)
Q Consensus 89 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~~~~ 166 (552)
|.......+. ..+... ...........+.+++.+||+.+|++||++.++.+.+..+.
T Consensus 465 ~~~~~~~~~~---------------------~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~ 522 (535)
T 2h8h_A 465 YPGMVNREVL---------------------DQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF 522 (535)
T ss_dssp STTCCHHHHH---------------------HHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSS
T ss_pred CCCCCHHHHH---------------------HHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence 9764332110 000000 00011123345899999999999999999999999888765
No 418
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=99.30 E-value=3.9e-13 Score=130.04 Aligned_cols=103 Identities=20% Similarity=0.281 Sum_probs=70.9
Q ss_pred hhhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cc
Q 008820 13 VAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QF 89 (552)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf 89 (552)
.+|+. |+++.+.... .....||+.|||||++.. ....++++|||||||+||||++|+ ||
T Consensus 188 ~~kL~Dfg~~~~~~~~~----~~~~~gt~~y~aPE~~~~--------------~~~~~~~~Di~slG~il~el~~g~~pf 249 (320)
T 3a99_A 188 ELKLIDFGSGALLKDTV----YTDFDGTRVYSPPEWIRY--------------HRYHGRSAAVWSLGILLYDMVCGDIPF 249 (320)
T ss_dssp EEEECCCTTCEECCSSC----BCCCCSCGGGSCHHHHHH--------------SCBCHHHHHHHHHHHHHHHHHHSSCSC
T ss_pred CEEEeeCcccccccccc----ccCCCCCccCCChHHhcc--------------CCCCCccchHHhHHHHHHHHHHCCCCC
Confidence 35666 5555554432 456789999999999821 122357899999999999999999 99
Q ss_pred hHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 90 TKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
...... + ... .........++.+++.+||+.+|.+||++.++.+
T Consensus 250 ~~~~~~-~---~~~-----------------------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 293 (320)
T 3a99_A 250 EHDEEI-I---RGQ-----------------------VFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQN 293 (320)
T ss_dssp CSHHHH-H---HCC-----------------------CCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred CChhhh-h---ccc-----------------------ccccccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 764321 0 000 0001112335889999999999999999887655
No 419
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=99.30 E-value=1.7e-13 Score=133.83 Aligned_cols=113 Identities=13% Similarity=0.146 Sum_probs=71.1
Q ss_pred hhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cch
Q 008820 14 AKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFT 90 (552)
Q Consensus 14 ~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~ 90 (552)
+|+. |+++.+.... ......||+.|||||++ .+ ......+++++|||||||+||||+||+ ||.
T Consensus 193 ~kl~Dfg~~~~~~~~~---~~~~~~gt~~y~aPE~~------~~-----~~~~~~~~~~~Di~slG~il~el~tg~~p~~ 258 (340)
T 3an0_A 193 VKMCDFGISGYLVDSV---AKTIDAGCKPYMAPERI------NP-----ELNQKGYSVKSDIWSLGITMIELAILRFPYD 258 (340)
T ss_dssp EEECCCSHHHHHSCHH---HHHHSSCCCCCCCHHHH------SC-----CTTCCSCCHHHHHHHHHHHHHHHHHTSCSSC
T ss_pred EEEeeCCCceeccccc---ccccCCCCccccCcccc------cc-----ccccCCCCchhhHHHHHHHHHHHHHCCCCCc
Confidence 4555 4455444332 23456899999999998 21 001235678999999999999999999 996
Q ss_pred HHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhh--hhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 91 KELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLEN--KFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
..... ....... ...... .......++.+++.+||+.+|.+||++.++.+
T Consensus 259 ~~~~~-------------------~~~~~~~-~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 310 (340)
T 3an0_A 259 SWGTP-------------------FQQLKQV-VEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 310 (340)
T ss_dssp CCSCH-------------------HHHHHHH-HHSCCCCCCGGGSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred cccch-------------------HHHHHHH-hcCCCCCCCcccCCHHHHHHHHHHccCCcccCcCHHHHhc
Confidence 42111 0000000 000000 00112345899999999999999999887655
No 420
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=99.30 E-value=1.1e-12 Score=125.66 Aligned_cols=115 Identities=12% Similarity=0.131 Sum_probs=65.5
Q ss_pred hhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhhhh-hhc-c--ccCCC
Q 008820 32 LSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDYI-RCV-S--TKASD 106 (552)
Q Consensus 32 ~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~~~-~~~-~--~~~~~ 106 (552)
.....||+.|+|||++ .+ ...++.++|||||||+||+|+||+ ||........ ..+ . .....
T Consensus 160 ~~~~~~~~~y~aPE~~------~~--------~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 225 (299)
T 2r3i_A 160 YTHEVVTLWYRAPEIL------LG--------AKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 225 (299)
T ss_dssp TTSCBCCCTTCCHHHH------TT--------CSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCT
T ss_pred cCcccccccccCcHHh------hc--------cccCChHHHHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCch
Confidence 4556899999999998 32 123578999999999999999999 9965432211 000 0 00000
Q ss_pred chhhhhhhhHHHHHHHH----HHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 107 DNIACLGMYMAWMEKVT----YLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 107 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
..|.............+ ............++.+++.+||+.+|.+||++.++.+
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~ 283 (299)
T 2r3i_A 226 VVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283 (299)
T ss_dssp TTSTTGGGSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred hhhhHhhcCcccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 00100000000000000 0000001123345889999999999999999887655
No 421
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.30 E-value=3.3e-09 Score=103.11 Aligned_cols=263 Identities=12% Similarity=-0.001 Sum_probs=173.0
Q ss_pred CCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCCEEEEEc---------CCCcEEEEeCCCCCCCccccccccCC--C
Q 008820 271 DKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGD---------SGGGIFVWSFSFPLGHEPLKKWNEEK--D 339 (552)
Q Consensus 271 dg~I~iwd~~~~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~---------~dg~i~vwd~~~~~~~~~~~~~~~~~--~ 339 (552)
++.|.+.|..+++.+.++.....+ . ++++|++..++++.. .++.|.+||..+.+....+....... .
T Consensus 58 ~~~V~ViD~~t~~v~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~ 135 (386)
T 3sjl_D 58 VTQQFVIDGEAGRVIGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLV 135 (386)
T ss_dssp SEEEEEEETTTTEEEEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCB
T ss_pred CCEEEEEECCCCeEEEEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCcccccc
Confidence 568999999999999999866665 4 999999887766653 46889999999876544443221000 0
Q ss_pred ceeeeEEEEeeCCCEEEEeeC--CCcEEEEECCCCceeEEecCCCCCeEEEEEe--CCEEEEEeCCCcEEEEECCC-Cce
Q 008820 340 WRYSGIHALTTSGRYLYTGSG--DRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC--NGVLYSGSRDGTIRLWSLSD-HSL 414 (552)
Q Consensus 340 ~~~~~~~~~~~~~~~l~sgs~--dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~-~~~ 414 (552)
.....-..++++|++++++.. ++.|.++|+.+++.+.++.... . ...+. ...+++.+.||++.+.++.+ ++.
T Consensus 136 g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g--~-~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v 212 (386)
T 3sjl_D 136 GTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPD--C-YHIFPTAPDTFFMHCRDGSLAKVAFGTEGTP 212 (386)
T ss_dssp SCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCS--E-EEEEEEETTEEEEEETTSCEEEEECCSSSCC
T ss_pred CCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCC--c-ceeecCCCceeEEECCCCCEEEEECCCCCeE
Confidence 011123589999998888764 6899999999999999885322 1 22233 44778999999999999986 665
Q ss_pred eEEEecCC---CCceEEEEEE-cCCCCEEEEEECCCcEEEEeCCcc----eeeee------------cccceEEEEEecC
Q 008820 415 LTVLEEDS---SGAVSSVLSL-TAVQHTLVVSHESGSIKVWRNDKF----MKSMQ------------THKGSVFAVFLEG 474 (552)
Q Consensus 415 ~~~~~~~~---~~~~~~~~~~-s~~~~~l~~g~~dg~i~iwd~~~~----~~~~~------------~h~~~v~~v~~~~ 474 (552)
........ ...+..-..| .++|++++ .+.+|.|++.|.... ...+. ........+..++
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~-vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~ 291 (386)
T 3sjl_D 213 EITHTEVFHPEDEFLINHPAYSQKAGRLVW-PTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRAL 291 (386)
T ss_dssp EEEECCCCSCTTSCBCSCCEEETTTTEEEE-EBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTT
T ss_pred EEeecceeccccccccccceeEcCCCcEEE-EeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCC
Confidence 33221110 1111111234 46776555 556899999997432 22221 1122345566778
Q ss_pred CEEEEEeC----------CCeEEEEecCCCeeeeeeccCCCcccCcceEEEEEeC-C--eEEEEe-CCCeEEEEEecCCc
Q 008820 475 KWLFTGGW----------DKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQ-G--KLFVGC-ADRTVKIALCNRQI 540 (552)
Q Consensus 475 ~~l~sgs~----------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~~-~--~l~s~s-~Dg~v~iw~~~~~~ 540 (552)
+.++.... .+.|.+.|+.+.+....+.. ...+.++++++ + +|+++. .++.|.++|.. +.
T Consensus 292 ~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~v------g~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~-t~ 364 (386)
T 3sjl_D 292 DRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEM------GHEIDSINVSQDEKPLLYALSTGDKTLYIHDAE-SG 364 (386)
T ss_dssp TEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEE------EEEECEEEECSSSSCEEEEEETTTTEEEEEETT-TC
T ss_pred CeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEEC------CCCcceEEECCCCCeEEEEEcCCCCeEEEEECC-CC
Confidence 87777643 25799999999887776554 34577899984 3 366654 58999999987 45
Q ss_pred ceeEEE
Q 008820 541 PEIFSL 546 (552)
Q Consensus 541 ~~~~~~ 546 (552)
+.+.++
T Consensus 365 k~~~~i 370 (386)
T 3sjl_D 365 EELRSV 370 (386)
T ss_dssp CEEEEE
T ss_pred cEEEEe
Confidence 555444
No 422
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.29 E-value=1.3e-09 Score=103.74 Aligned_cols=241 Identities=12% Similarity=0.102 Sum_probs=151.2
Q ss_pred CeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCC
Q 008820 282 FSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGD 361 (552)
Q Consensus 282 ~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~d 361 (552)
+..+..+..+.....+++|+|+++.+++++..++.|..||..++ . ..+..... .....+++++++++++...+
T Consensus 17 ~~~~~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~---~~~~~~~~--~~~~l~~~~dg~l~v~~~~~ 89 (296)
T 3e5z_A 17 GAEARRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--L---SPEMHPSH--HQNGHCLNKQGHLIACSHGL 89 (296)
T ss_dssp TCCCEEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--E---EEEESSCS--SEEEEEECTTCCEEEEETTT
T ss_pred CCcEEEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--e---EEEECCCC--CcceeeECCCCcEEEEecCC
Confidence 34455666677788999999988778899999999999998864 2 22221111 12234677888877777777
Q ss_pred CcEEEEECCCCceeEEecCC----CCCeEEEEEe-CC-EEEE----Ee-------------CCCcEEEEECCCCceeEEE
Q 008820 362 RTIKAWSLLDGTLSCTMSGH----KSAVSTLAVC-NG-VLYS----GS-------------RDGTIRLWSLSDHSLLTVL 418 (552)
Q Consensus 362 g~i~iwd~~~~~~~~~~~~h----~~~v~~l~~~-~~-~l~s----~~-------------~dg~i~iwd~~~~~~~~~~ 418 (552)
+.|.+||..+++........ ...+.+++++ ++ ++++ |+ ..+.|..+|.. ++. ..+
T Consensus 90 ~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~-~~~ 167 (296)
T 3e5z_A 90 RRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTL-SAP 167 (296)
T ss_dssp TEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCE-EEE
T ss_pred CeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCE-EEe
Confidence 89999999888765443221 2345678888 44 5554 22 13456666655 443 333
Q ss_pred ecCCCCceEEEEEEcCCCCEEEEEECCCcEEEEeCC---cc---eeeeecccceEEEEEe--cCCEEEEEeCCCeEEEEe
Q 008820 419 EEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRND---KF---MKSMQTHKGSVFAVFL--EGKWLFTGGWDKTVSVQE 490 (552)
Q Consensus 419 ~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~---~~---~~~~~~h~~~v~~v~~--~~~~l~sgs~dg~i~iwd 490 (552)
... ...... ++++|+++.+++.+.++.|++||.. +. ...+..+...+..+.+ +|+++++. ++.|.+||
T Consensus 168 ~~~-~~~~~g-i~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~--~~~v~~~~ 243 (296)
T 3e5z_A 168 IRD-RVKPNG-LAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA--GDGVHVLT 243 (296)
T ss_dssp ECC-CSSEEE-EEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE--TTEEEEEC
T ss_pred ecC-CCCCcc-EEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc--CCeEEEEC
Confidence 322 223333 6899999998777778999999964 22 1223223334445554 77766555 88999999
Q ss_pred cCCCeeeeeeccCCCcccCcceEEEEEe-CC--eEEEEeCCCeEEEEEecCCcceeEE
Q 008820 491 LAGDEFEEDVIPTGAIPCGSVITALLYW-QG--KLFVGCADRTVKIALCNRQIPEIFS 545 (552)
Q Consensus 491 ~~~~~~~~~~~~~~~~~~~~~v~~l~~~-~~--~l~s~s~Dg~v~iw~~~~~~~~~~~ 545 (552)
..+. ....+... .. +++++|. ++ .|++++.+ .+|.++.....+..
T Consensus 244 ~~g~-~~~~~~~~-----~~-~~~~~f~~~d~~~L~v~t~~---~l~~~~~~~~~~~~ 291 (296)
T 3e5z_A 244 PDGD-ELGRVLTP-----QT-TSNLCFGGPEGRTLYMTVST---EFWSIETNVRGLEH 291 (296)
T ss_dssp TTSC-EEEEEECS-----SC-CCEEEEESTTSCEEEEEETT---EEEEEECSCCBCCC
T ss_pred CCCC-EEEEEECC-----CC-ceeEEEECCCCCEEEEEcCC---eEEEEEcccccccc
Confidence 8744 43333321 23 7788885 43 58888876 45666544444443
No 423
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=99.29 E-value=4.1e-13 Score=127.93 Aligned_cols=114 Identities=13% Similarity=0.137 Sum_probs=63.8
Q ss_pred hhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cch
Q 008820 14 AKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFT 90 (552)
Q Consensus 14 ~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~ 90 (552)
+|+. |+++.+..... .....||+.|+|||++... .....+++++|||||||++|+|+||+ ||.
T Consensus 149 ~kl~Dfg~~~~~~~~~~---~~~~~~t~~y~aPE~~~~~-----------~~~~~~~~~~Di~slG~il~~l~~g~~p~~ 214 (290)
T 3fme_A 149 VKMCDFGISGYLVDDVA---KDIDAGCKPYMAPERINPE-----------LNQKGYSVKSDIWSLGITMIELAILRFPYD 214 (290)
T ss_dssp EEBCCC------------------CCCCCCSCHHHHSCC-----------TTC--CCHHHHHHHHHHHHHHHHHTSCSSC
T ss_pred EEEeecCCccccccccc---ccccCCCccccChhhcChh-----------hcCcCCCcHHHHHHHHHHHHHHHHCCCCcc
Confidence 4555 45555544432 3445899999999997110 01345678999999999999999999 996
Q ss_pred HHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHH-HhhhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 91 KELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYL-LENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
..... ........... +.........++.+++.+||+.+|.+||++.++.+
T Consensus 215 ~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~ 266 (290)
T 3fme_A 215 SWGTP-------------------FQQLKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 266 (290)
T ss_dssp CCSCH-------------------HHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred ccCch-------------------HHHHHHHhccCCCCcccccCCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence 42111 00000100000 00011123445899999999999999999887655
No 424
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.29 E-value=7.2e-10 Score=103.92 Aligned_cols=233 Identities=10% Similarity=0.025 Sum_probs=147.9
Q ss_pred ceEEEEEc--CCEEE-EEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCcc
Q 008820 254 CVTGLAVG--GGFLF-SSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEP 330 (552)
Q Consensus 254 ~V~~l~~s--~~~l~-s~s~dg~I~iwd~~~~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~ 330 (552)
...+++++ +++++ +.+.++.|.+||..+.........+...+.++++.+++. ++++.. ++.|.+||.......
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~-l~v~~~-~~~i~~~d~~~~~~~-- 100 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGT-VYVTDF-NNRVVTLAAGSNNQT-- 100 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCC-EEEEET-TTEEEEECTTCSCCE--
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCC-EEEEcC-CCEEEEEeCCCceEe--
Confidence 56788887 66666 446788999999765543322223335678899988765 656655 889999997653221
Q ss_pred ccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe-CC-EEEEEeCCCcEEEEE
Q 008820 331 LKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC-NG-VLYSGSRDGTIRLWS 408 (552)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~-~~-~l~s~~~dg~i~iwd 408 (552)
....... ....-.++.++++.+++...++.|.+|+..+.............+.+++++ ++ ++++...++.|.+||
T Consensus 101 --~~~~~~~-~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~ 177 (270)
T 1rwi_B 101 --VLPFDGL-NYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLE 177 (270)
T ss_dssp --ECCCCSC-SSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEEC
T ss_pred --eeecCCc-CCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEe
Confidence 1111110 111234667788877777778899999865554433222333467889998 44 555555678999999
Q ss_pred CCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEECCCcEEEEeCCccee-eee-cccceEEEEEe--cCCEEEEEeCCC
Q 008820 409 LSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDKFMK-SMQ-THKGSVFAVFL--EGKWLFTGGWDK 484 (552)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~~~~~-~~~-~h~~~v~~v~~--~~~~l~sgs~dg 484 (552)
............. ...... ++++++|+++++...++.|.+||...... ... .+...+.++.+ +|+.+++...++
T Consensus 178 ~~~~~~~~~~~~~-~~~p~~-i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~ 255 (270)
T 1rwi_B 178 AESNNQVVLPFTD-ITAPWG-IAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGND 255 (270)
T ss_dssp TTTCCEEECCCSS-CCSEEE-EEECTTCCEEEEETTTSCEEEECTTCSCCEECCCCSCSCEEEEEECTTCCEEEEEGGGT
T ss_pred cCCCceEeecccC-CCCceE-EEECCCCCEEEEECCCCcEEEEcCCCCcceeeccCCCCCceeEEECCCCCEEEEECCCC
Confidence 8776544322221 123333 68999998777777788999999654322 222 23345667766 788888888899
Q ss_pred eEEEEecCCCe
Q 008820 485 TVSVQELAGDE 495 (552)
Q Consensus 485 ~i~iwd~~~~~ 495 (552)
.|++++....+
T Consensus 256 ~v~~~~~~~~~ 266 (270)
T 1rwi_B 256 RVVKLTSLEHH 266 (270)
T ss_dssp EEEEECCCGGG
T ss_pred EEEEEcCCCcc
Confidence 99999987653
No 425
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=99.28 E-value=8.6e-13 Score=131.35 Aligned_cols=47 Identities=23% Similarity=0.264 Sum_probs=38.8
Q ss_pred hhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHH
Q 008820 33 SDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKE 92 (552)
Q Consensus 33 ~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~ 92 (552)
....||+.|||||++ .+ ....++.++|||||||+||||++|+ ||...
T Consensus 193 ~~~~gt~~y~aPE~~------~~-------~~~~~~~~~DiwslG~il~el~~g~~pf~~~ 240 (389)
T 3gni_B 193 KYSVKVLPWLSPEVL------QQ-------NLQGYDAKSDIYSVGITACELANGHVPFKDM 240 (389)
T ss_dssp TTCTTTGGGSCHHHH------ST-------TSSCBCTHHHHHHHHHHHHHHHHSSCTTTTC
T ss_pred ccccccccccCHHHH------hc-------cCCCCCcHhHHHHHHHHHHHHHHCCCCCCCC
Confidence 445899999999999 22 1145778999999999999999999 99653
No 426
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=99.28 E-value=6.3e-13 Score=129.31 Aligned_cols=92 Identities=20% Similarity=0.246 Sum_probs=62.4
Q ss_pred hhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhhhhhhccccCCCchhh
Q 008820 32 LSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDYIRCVSTKASDDNIA 110 (552)
Q Consensus 32 ~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~~~~~~~~~~~~~~~~ 110 (552)
.....||+.|||||++ .+ ..+++++|||||||+||||++|. |+...... +..+.....
T Consensus 233 ~~~~~gt~~y~aPE~~------~~---------~~~~~~~Di~slG~il~el~~~~~~~~~~~~~-~~~~~~~~~----- 291 (332)
T 3qd2_B 233 HTGQVGTKLYMSPEQI------HG---------NNYSHKVDIFSLGLILFELLYSFSTQMERVRI-ITDVRNLKF----- 291 (332)
T ss_dssp CCSCC-CGGGSCHHHH------HC---------CCCCTHHHHHHHHHHHHHHHSCCCCHHHHHHH-HHHHHTTCC-----
T ss_pred ccccCCCcCccChHHh------cC---------CCCcchhhHHHHHHHHHHHHHcCCChhHHHHH-HHHhhccCC-----
Confidence 4567899999999999 22 45678999999999999999999 87553221 110000000
Q ss_pred hhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 111 CLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
+ .. ... ..+.+.+++.+||+.+|.+||++.++.+
T Consensus 292 ----~-~~---~~~--------~~~~~~~li~~~l~~~p~~Rps~~~~l~ 325 (332)
T 3qd2_B 292 ----P-LL---FTQ--------KYPQEHMMVQDMLSPSPTERPEATDIIE 325 (332)
T ss_dssp ----C-HH---HHH--------HCHHHHHHHHHHHCSSGGGSCCHHHHHH
T ss_pred ----C-cc---ccc--------CChhHHHHHHHHccCCCCcCCCHHHHhh
Confidence 0 00 001 1223788999999999999999887665
No 427
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=99.28 E-value=6.6e-13 Score=130.76 Aligned_cols=114 Identities=18% Similarity=0.248 Sum_probs=64.6
Q ss_pred hhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhhhhhhccc-----cCC
Q 008820 32 LSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDYIRCVST-----KAS 105 (552)
Q Consensus 32 ~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~~~~~~~~-----~~~ 105 (552)
.....||+.|||||++ .+ ..++.++|||||||+||+|+||+ ||.......+..+.. ...
T Consensus 187 ~~~~~gt~~y~aPE~~------~~---------~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 251 (360)
T 3eqc_A 187 ANSFVGTRSYMSPERL------QG---------THYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAA 251 (360)
T ss_dssp ----CCCCTTCCHHHH------TT---------CCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC--------
T ss_pred ccCCCCCCCeECHHHH------cC---------CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCC
Confidence 4567899999999999 32 55778999999999999999999 996543332211000 000
Q ss_pred Cchhhhh----------------hhhHHHHHHHHHHHhhh--hcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 106 DDNIACL----------------GMYMAWMEKVTYLLENK--FGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 106 ~~~~~~~----------------~~~~~~~~~~~~~~~~~--~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
+..+... ................. ......++.+++.+||+.+|.+||++.++.+
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 324 (360)
T 3eqc_A 252 ETPPRPRTPGRPLNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMV 324 (360)
T ss_dssp ----------------------CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred CCCCCcccCCCcccccccCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence 0000000 00000011111000000 0112445899999999999999999887655
No 428
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=99.28 E-value=9.5e-13 Score=127.94 Aligned_cols=59 Identities=20% Similarity=0.361 Sum_probs=45.3
Q ss_pred hhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cc
Q 008820 14 AKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QF 89 (552)
Q Consensus 14 ~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf 89 (552)
.|+. |+++.+..... .....||+.|+|||++ .+ ...+++++|||||||+||+|++|+ ||
T Consensus 170 ~kl~Dfg~a~~~~~~~~---~~~~~~~~~y~aPE~~------~~--------~~~~~~~~DiwslG~il~~ll~g~~p~ 231 (330)
T 3nsz_A 170 LRLIDWGLAEFYHPGQE---YNVRVASRYFKGPELL------VD--------YQMYDYSLDMWSLGCMLASMIFRKEPF 231 (330)
T ss_dssp EEECCCTTCEECCTTCC---CCSCCSCGGGCCHHHH------TT--------CCCCCTHHHHHHHHHHHHHHHHTCSSS
T ss_pred EEEEeCCCceEcCCCCc---cccccccccccChhhh------cC--------CCcCCchhhHHHHHHHHHHHHhCCCCc
Confidence 4555 55655544432 4567899999999998 22 245678999999999999999999 99
No 429
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.28 E-value=4.6e-08 Score=92.76 Aligned_cols=233 Identities=10% Similarity=0.066 Sum_probs=146.8
Q ss_pred ecCccceEEEEEc--CCEEEEEeCCCcEEEEeCCCCeEEEEEe--CCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCC
Q 008820 249 QGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFK--GHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSF 324 (552)
Q Consensus 249 ~~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~~~~~~~~--~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~ 324 (552)
..+...+.+++++ +.++++...++.|..||.. ++. ..+. .....+.++++.+++ .++++...++.|..||. +
T Consensus 53 ~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~-~~~~~~~~~~~~~~i~~~~~g-~l~v~~~~~~~i~~~d~-~ 128 (299)
T 2z2n_A 53 PTPDAKVMCLTISSDGEVWFTENAANKIGRITKK-GII-KEYTLPNPDSAPYGITEGPNG-DIWFTEMNGNRIGRITD-D 128 (299)
T ss_dssp SSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCE-EEEECSSTTCCEEEEEECTTS-CEEEEETTTTEEEEECT-T
T ss_pred CcccCceeeEEECCCCCEEEeCCCCCeEEEECCC-CcE-EEEeCCCcCCCceeeEECCCC-CEEEEecCCceEEEECC-C
Confidence 3455778999997 6777766668899999976 333 2332 345678999998865 46677777889999997 3
Q ss_pred CCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCceeEE-ecCCCCCeEEEEEe-CC-EEEEEeCC
Q 008820 325 PLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCT-MSGHKSAVSTLAVC-NG-VLYSGSRD 401 (552)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~-~~~h~~~v~~l~~~-~~-~l~s~~~d 401 (552)
+... ... ... .. ......++.++++..++...++.|..||. +++.... +..+...+.+++++ ++ +.++...+
T Consensus 129 g~~~-~~~-~~~-~~-~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~ 203 (299)
T 2z2n_A 129 GKIR-EYE-LPN-KG-SYPSFITLGSDNALWFTENQNNAIGRITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIG 203 (299)
T ss_dssp CCEE-EEE-CSS-TT-CCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTT
T ss_pred CCEE-Eec-CCC-CC-CCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCC
Confidence 3211 111 110 11 11223356677777776666789999998 6665543 33445568899998 44 44444457
Q ss_pred CcEEEEECCCCceeEEEecC-CCCceEEEEEEcCCCCEEEEEECCCcEEEEeCCcceeee--ecccceEEEEEe-cCCEE
Q 008820 402 GTIRLWSLSDHSLLTVLEED-SSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDKFMKSM--QTHKGSVFAVFL-EGKWL 477 (552)
Q Consensus 402 g~i~iwd~~~~~~~~~~~~~-~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~~~~~~~--~~h~~~v~~v~~-~~~~l 477 (552)
+.|..||. +++... +... ...... .++++++|++.++...++.|..||.......+ ..+...+.++.+ ++...
T Consensus 204 ~~i~~~~~-~g~~~~-~~~~~~~~~~~-~i~~~~~g~l~v~~~~~~~i~~~d~~g~~~~~~~~~~~~~~~~i~~~~g~l~ 280 (299)
T 2z2n_A 204 NKIGRITT-SGEITE-FKIPTPNARPH-AITAGAGIDLWFTEWGANKIGRLTSNNIIEEYPIQIKSAEPHGICFDGETIW 280 (299)
T ss_dssp TEEEEECT-TCCEEE-EECSSTTCCEE-EEEECSTTCEEEEETTTTEEEEEETTTEEEEEECSSSSCCEEEEEECSSCEE
T ss_pred ceEEEECC-CCcEEE-EECCCCCCCce-eEEECCCCCEEEeccCCceEEEECCCCceEEEeCCCCCCccceEEecCCCEE
Confidence 89999999 666433 3222 122333 46889999866666577899999975433333 233455666665 55554
Q ss_pred EEEeCCCeEEEEecCCC
Q 008820 478 FTGGWDKTVSVQELAGD 494 (552)
Q Consensus 478 ~sgs~dg~i~iwd~~~~ 494 (552)
++. ..+.+..++..+.
T Consensus 281 v~~-~~~~l~~~~~~~~ 296 (299)
T 2z2n_A 281 FAM-ECDKIGKLTLIKD 296 (299)
T ss_dssp EEE-TTTEEEEEEEC--
T ss_pred EEe-cCCcEEEEEcCcc
Confidence 444 4677877887654
No 430
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=99.28 E-value=1.6e-13 Score=138.03 Aligned_cols=117 Identities=20% Similarity=0.272 Sum_probs=67.0
Q ss_pred hhcc--cccccccccchh-hhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhh-CC-C
Q 008820 14 AKVG--CVGSRICDKEVG-LFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE-Q 88 (552)
Q Consensus 14 ~~~~--~~~~~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~llt-g~-p 88 (552)
+|+. |+|+.+...... ...+...||+.|||||++ .+ ......+.++|||||||+||||+| |+ |
T Consensus 162 ~kL~DFG~a~~~~~~~~~~~~~~~~~gt~~y~APE~l------~~------~~~~~~t~~~DiwSlG~il~ellt~g~~p 229 (432)
T 3p23_A 162 AMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEML------SE------DCKENPTYTVDIFSAGCVFYYVISEGSHP 229 (432)
T ss_dssp EEECCTTEEECC------------CCSCTTSCCGGGT------SC------C---CCCTHHHHHHHHHHHHHHHTTSCBT
T ss_pred EEEecccceeeccCCCcceeeccccCCCcCccChhhh------hc------ccccCCCcHHHHHHHHHHHHHHHcCCCCC
Confidence 4555 566665543211 235678899999999998 21 012455679999999999999999 88 9
Q ss_pred chHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 89 FTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 89 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
|..........+...... .... + .......+.+++.+||+.+|.+||++.++.+
T Consensus 230 f~~~~~~~~~~~~~~~~~---~~~~-~--------------~~~~~~~~~~li~~~L~~dP~~Rps~~evl~ 283 (432)
T 3p23_A 230 FGKSLQRQANILLGACSL---DCLH-P--------------EKHEDVIARELIEKMIAMDPQKRPSAKHVLK 283 (432)
T ss_dssp TBSTTTHHHHHHTTCCCC---TTSC-T--------------TCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred cchhhHHHHHHHhccCCc---cccC-c--------------cccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence 965433221100110000 0000 0 0001112778999999999999999887654
No 431
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=99.28 E-value=1.5e-12 Score=132.50 Aligned_cols=41 Identities=24% Similarity=0.441 Sum_probs=30.5
Q ss_pred hhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhh
Q 008820 31 FLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI 85 (552)
Q Consensus 31 ~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~llt 85 (552)
.++..+||+.|||||++ .+ ...++.++|||||||+||||+|
T Consensus 239 ~~~~~~gt~~Y~aPE~~------~~--------~~~~~~~~DiwSlG~il~ellt 279 (458)
T 3rp9_A 239 QLTGHVVTRWYRAPELI------LL--------QENYTEAIDVWSIGCIFAELLN 279 (458)
T ss_dssp ------CCCTTCCHHHH------TT--------CCCCCTHHHHHHHHHHHHHHHT
T ss_pred cccCCcccccccChHHh------hC--------CCCCCcHhHHHHHHHHHHHHHH
Confidence 36778999999999987 11 2457789999999999999999
No 432
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=99.27 E-value=1.3e-12 Score=128.86 Aligned_cols=129 Identities=9% Similarity=0.099 Sum_probs=65.3
Q ss_pred hhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cch
Q 008820 14 AKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFT 90 (552)
Q Consensus 14 ~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~ 90 (552)
.|+. |+++...... ......||+.|+|||++ .+ ...++.++|||||||++|+|++|+ ||.
T Consensus 173 ~kl~Dfg~~~~~~~~~---~~~~~~~t~~y~aPE~~------~~--------~~~~~~~~DiwslG~il~~l~~g~~pf~ 235 (362)
T 3pg1_A 173 ITICDFNLAREDTADA---NKTHYVTHRWYRAPELV------MQ--------FKGFTKLVDMWSAGCVMAEMFNRKALFR 235 (362)
T ss_dssp EEECCTTC------------------CGGGCCHHHH------TT--------CTTCCTHHHHHHHHHHHHHHHHSSCSCC
T ss_pred EEEEecCccccccccc---ccceecccceecCcHHh------cC--------CCCCCcHhHHHhHHHHHHHHHhCCCCCC
Confidence 4555 4454333332 25667899999999998 22 245678999999999999999999 996
Q ss_pred HHHhhhh----hhccccCCCchhhhhhhhHHHHHHHHH--------HHhhhhcCccccHHHHHHhhcccCCCCCcchhhH
Q 008820 91 KELIDYI----RCVSTKASDDNIACLGMYMAWMEKVTY--------LLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNV 158 (552)
Q Consensus 91 ~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~ 158 (552)
....... ...........+..+.. ......... ..........+.+.+++.+||+.+|.+||++.++
T Consensus 236 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~el 314 (362)
T 3pg1_A 236 GSTFYNQLNKIVEVVGTPKIEDVVMFSS-PSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQA 314 (362)
T ss_dssp CSSHHHHHHHHHHHHCCCCHHHHHHTSC-HHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred CCCHHHHHHHHHHHcCCCChHHhhhccc-hhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHH
Confidence 5432211 10000000000000000 000000000 0001111234458899999999999999998876
Q ss_pred HH
Q 008820 159 WK 160 (552)
Q Consensus 159 ~~ 160 (552)
.+
T Consensus 315 l~ 316 (362)
T 3pg1_A 315 LR 316 (362)
T ss_dssp HT
T ss_pred Hc
Confidence 55
No 433
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=99.27 E-value=1.1e-12 Score=138.94 Aligned_cols=117 Identities=17% Similarity=0.199 Sum_probs=76.1
Q ss_pred hhhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhh-CC-C
Q 008820 13 VAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLI-GE-Q 88 (552)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~llt-g~-p 88 (552)
.+|+. |+++.+...... ..+...||+.|||||++. ...++.++|||||||+||||++ |+ |
T Consensus 529 ~vkL~DFG~a~~~~~~~~~-~~~~~~~t~~y~aPE~~~---------------~~~~~~~~DiwSlG~il~ellt~g~~P 592 (656)
T 2j0j_A 529 CVKLGDFGLSRYMEDSTYY-KASKGKLPIKWMAPESIN---------------FRRFTSASDVWMFGVCMWEILMHGVKP 592 (656)
T ss_dssp EEEECCCCCCCSCCC-----------CCGGGCCHHHHH---------------HCCCCHHHHHHHHHHHHHHHHTTSCCT
T ss_pred CEEEEecCCCeecCCCcce-eccCCCCCcceeCHHHhc---------------CCCCCchhhHHHHHHHHHHHHHcCCCC
Confidence 35666 667666554332 245667899999999992 2456789999999999999997 99 9
Q ss_pred chHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHH-HhhhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHHhhh
Q 008820 89 FTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYL-LENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRELI 166 (552)
Q Consensus 89 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~~~~ 166 (552)
|.+.....+. ..+... ...........+.+++.+||+.+|.+||++.++.+.+..++
T Consensus 593 f~~~~~~~~~---------------------~~i~~~~~~~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il 650 (656)
T 2j0j_A 593 FQGVKNNDVI---------------------GRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTIL 650 (656)
T ss_dssp TTTCCHHHHH---------------------HHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCCCHHHHH---------------------HHHHcCCCCCCCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence 9764332110 000000 00111223446899999999999999999999999888775
No 434
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=99.27 E-value=1.2e-12 Score=128.58 Aligned_cols=114 Identities=22% Similarity=0.321 Sum_probs=66.8
Q ss_pred hhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhhhh-hh---cccc-CC
Q 008820 32 LSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDYI-RC---VSTK-AS 105 (552)
Q Consensus 32 ~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~~~-~~---~~~~-~~ 105 (552)
...+.||+.|||||++. + ...++.++|||||||+||+|++|+ ||.+...... .. +.+. ..
T Consensus 179 ~~~~~gt~~y~aPE~~~------~--------~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 244 (353)
T 2b9h_A 179 MVEFVATRWYRAPEVML------T--------SAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHS 244 (353)
T ss_dssp -CCCCCCGGGCCHHHHH------S--------CCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCS
T ss_pred hhhccccccccCCeeec------c--------CCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCch
Confidence 44578999999999982 1 245678999999999999999999 9965432211 00 0000 00
Q ss_pred CchhhhhhhhHHHHHHHHHH-------HhhhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 106 DDNIACLGMYMAWMEKVTYL-------LENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
...+.... .....+..... ..........++.+++.+||+.+|.+||++.++.+
T Consensus 245 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (353)
T 2b9h_A 245 DNDLRCIE-SPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALE 305 (353)
T ss_dssp TTTTTTCC-CHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred hccccccc-cchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 00000000 00000100000 01111234456889999999999999999887665
No 435
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=99.26 E-value=2.2e-12 Score=130.05 Aligned_cols=45 Identities=20% Similarity=0.338 Sum_probs=34.7
Q ss_pred hhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cc
Q 008820 31 FLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QF 89 (552)
Q Consensus 31 ~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf 89 (552)
.++..+||+.|||||++ .+ ...++.++|||||||+||||++|. ||
T Consensus 207 ~~~~~~gt~~Y~APE~~------~~--------~~~~~~~~DiwSlG~il~ell~g~~p~ 252 (432)
T 3n9x_A 207 QLTSHVVTRWYRAPELI------LL--------QENYTKSIDIWSTGCIFAELLNMLQSH 252 (432)
T ss_dssp ----CCCCCTTCCHHHH------TT--------CSCCCTHHHHHHHHHHHHHHHTTCTTT
T ss_pred cccCCCCCccccCHHHH------hc--------CCCCCcccccchHHHHHHHHHhccccc
Confidence 35788999999999997 11 245778999999999999999865 55
No 436
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.26 E-value=3.2e-09 Score=114.81 Aligned_cols=240 Identities=13% Similarity=0.086 Sum_probs=146.9
Q ss_pred CccceEEEEEc--CCEEEEEeCC-----CcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCc-------
Q 008820 251 HRDCVTGLAVG--GGFLFSSSFD-----KSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGG------- 316 (552)
Q Consensus 251 H~~~V~~l~~s--~~~l~s~s~d-----g~I~iwd~~~~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~------- 316 (552)
|...+.+++|+ |++|+.++.+ .+|++||+.+++.+... .+...+..++|+|+ ..+ +.++.|+.
T Consensus 161 ~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~-~~~~~~~~~~wspD-~~l-~~~~~~~~~~~~~~~ 237 (741)
T 1yr2_A 161 GATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADE-LKWVKFSGLAWLGN-DAL-LYSRFAEPKEGQAFQ 237 (741)
T ss_dssp --EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEE-EEEEESCCCEESTT-SEE-EEEECCCC-------
T ss_pred CCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCcc-CCCceeccEEEECC-CEE-EEEEecCcccccccc
Confidence 44568889999 8888877654 46999999999876532 12222357899998 655 44444443
Q ss_pred -------EEEEeCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCC-----cEEEEECCCC--ceeEEecCCC
Q 008820 317 -------IFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDR-----TIKAWSLLDG--TLSCTMSGHK 382 (552)
Q Consensus 317 -------i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg-----~i~iwd~~~~--~~~~~~~~h~ 382 (552)
|++|++.++.....+ .+..........-..++++|++|+..+.++ .|++||+.++ ++...+..+.
T Consensus 238 ~~~~~~~v~~~~lgt~~~~~~l-v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~ 316 (741)
T 1yr2_A 238 ALNYNQTVWLHRLGTPQSADQP-VFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDL 316 (741)
T ss_dssp -CCCCCEEEEEETTSCGGGCEE-EECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSS
T ss_pred cCCCCCEEEEEECCCCchhCEE-EeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCC
Confidence 889998765432111 111111101122347899999887776544 8999999877 4144555555
Q ss_pred CCeEEEEEe-CCEEEEEeCC----CcEEEEECCCC-ceeEEEecCCCCceEEEEEEcCCCCEEEEEECCCcEEEEe--C-
Q 008820 383 SAVSTLAVC-NGVLYSGSRD----GTIRLWSLSDH-SLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWR--N- 453 (552)
Q Consensus 383 ~~v~~l~~~-~~~l~s~~~d----g~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd--~- 453 (552)
..+....+. ++.|+..+.+ +.|.+||+.++ .....+..+....+.. +.++ ++.++++...|+..++|. .
T Consensus 317 ~~~~~~~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~-~~~~-~~~lv~~~~~dg~~~l~~~~~~ 394 (741)
T 1yr2_A 317 KAQWDFVDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLES-VGIA-GNRLFASYIHDAKSQVLAFDLD 394 (741)
T ss_dssp SSCEEEEEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEE-EEEE-BTEEEEEEEETTEEEEEEEETT
T ss_pred CceEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEE-EEEE-CCEEEEEEEECCEEEEEEEeCC
Confidence 545544444 5677666653 45999999875 2334443333333333 3555 566778888898877774 3
Q ss_pred Ccceeeeec-ccceEEEEEe--cCCEEE-EEe---CCCeEEEEecCCCee
Q 008820 454 DKFMKSMQT-HKGSVFAVFL--EGKWLF-TGG---WDKTVSVQELAGDEF 496 (552)
Q Consensus 454 ~~~~~~~~~-h~~~v~~v~~--~~~~l~-sgs---~dg~i~iwd~~~~~~ 496 (552)
++....+.. +.+.+..+++ +++.++ +.+ ..++|++||+.+++.
T Consensus 395 g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~~ 444 (741)
T 1yr2_A 395 GKPAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAKT 444 (741)
T ss_dssp SCEEEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTEE
T ss_pred CCceeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcE
Confidence 334455554 3566777765 666554 332 347899999988764
No 437
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=99.26 E-value=1.2e-12 Score=126.55 Aligned_cols=114 Identities=18% Similarity=0.231 Sum_probs=62.9
Q ss_pred hhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cch
Q 008820 14 AKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFT 90 (552)
Q Consensus 14 ~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~ 90 (552)
+|+. |+++.+..... .....||+.|+|||++..... ....+++++|||||||+||||++|+ ||.
T Consensus 164 ~kl~dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~----------~~~~~~~~~Di~slG~il~~l~~g~~pf~ 230 (318)
T 2dyl_A 164 IKLCDFGISGRLVDDKA---KDRSAGCAAYMAPERIDPPDP----------TKPDYDIRADVWSLGISLVELATGQFPYK 230 (318)
T ss_dssp EEECCCTTC-----------------CCTTCCHHHHC------------------CCTHHHHHHHHHHHHHHHHSSCTTT
T ss_pred EEEEECCCchhccCCcc---ccccCCCccccChhhcccccc----------cccCCccccchhhHHHHHHHHHhCCCCCC
Confidence 4555 44554444322 456789999999999821100 1245678999999999999999999 996
Q ss_pred HHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhh---hhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 91 KELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLEN---KFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
...... ............ .......++.+++.+||+.+|.+||++.++.+
T Consensus 231 ~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (318)
T 2dyl_A 231 NCKTDF--------------------EVLTKVLQEEPPLLPGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLE 283 (318)
T ss_dssp TCCSHH--------------------HHHHHHHHSCCCCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred CCCccH--------------------HHHHHHhccCCCCCCccCCCCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 521110 000000000000 01123445999999999999999999887655
No 438
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.26 E-value=1.5e-13 Score=135.58 Aligned_cols=257 Identities=19% Similarity=0.125 Sum_probs=140.1
Q ss_pred EEcCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCccccccccCC
Q 008820 259 AVGGGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEK 338 (552)
Q Consensus 259 ~~s~~~l~s~s~dg~I~iwd~~~~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~ 338 (552)
+..++.+++++.||.|+.||..+|+.+.++.. +.+.+..+..++ .++++++.||.|+.||..+++...........
T Consensus 6 ~v~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g-~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~- 81 (369)
T 2hz6_A 6 TLPETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEE-PAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPE- 81 (369)
T ss_dssp --CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC------CCEEECTTTCCEEEC-----CCSEECSCCHHH-
T ss_pred eeeCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCC-CEEEEeCCCCEEEEEECCCCceeeeeeccCcc-
Confidence 34588999999999999999999999999886 455554455544 45677789999999999877653322111000
Q ss_pred CceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEeCCEEEEEeCCCcEEEEECCCCceeEEE
Q 008820 339 DWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVCNGVLYSGSRDGTIRLWSLSDHSLLTVL 418 (552)
Q Consensus 339 ~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 418 (552)
...... .+ ..+..+++|+.|+.|+.||.++|+.++.+..+.. +. .+-.++.+++++.|+.|+.||.++++.+..+
T Consensus 82 ~~~~sp--~~-~~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~~-~~-~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~ 156 (369)
T 2hz6_A 82 LVQASP--CR-SSDGILYMGKKQDIWYVIDLLTGEKQQTLSSAFA-DS-LSPSTSLLYLGRTEYTITMYDTKTRELRWNA 156 (369)
T ss_dssp HHTTCS--CC------CCCCEEEEEEEEECCC------------------------EEEEEEEEEEECCCSSSSSCCCEE
T ss_pred ccccCc--eE-ecCCEEEEEeCCCEEEEEECCCCcEEEEecCCCc-cc-ccccCCEEEEEecCCEEEEEECCCCCEEEeE
Confidence 000000 01 1345788889999999999999999988875542 11 1113668999999999999999999987766
Q ss_pred ecCCCCceEEEEEEcCCC---CEEEEEECCCcEEEEeCCc--ceeeeecccceEEEE-Ee--cCCEE----EEEeCCCeE
Q 008820 419 EEDSSGAVSSVLSLTAVQ---HTLVVSHESGSIKVWRNDK--FMKSMQTHKGSVFAV-FL--EGKWL----FTGGWDKTV 486 (552)
Q Consensus 419 ~~~~~~~~~~~~~~s~~~---~~l~~g~~dg~i~iwd~~~--~~~~~~~h~~~v~~v-~~--~~~~l----~sgs~dg~i 486 (552)
..... .. ..+..+. ..+++++.||.|+.||..+ .+.... ...++..+ .. ++... +.+ ++.+
T Consensus 157 ~~~~~---~~-~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~-~~~pv~~~~~~~~dg~~~v~~~~~~--~~~l 229 (369)
T 2hz6_A 157 TYFDY---AA-SLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQN-YASPVVAFYVWQREGLRKVMHINVA--VETL 229 (369)
T ss_dssp EEEEE---CC-BCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEE-CSSCEEEEEECTTSSCEEECCEEEE--HHHH
T ss_pred ecccc---cC-ccccCCccccceEEEECCCCEEEEEECCCCcEEEEec-CCCceEEEEEecCCceEeccceeec--ccce
Confidence 53211 11 1233322 5677889999999999643 333333 23344332 22 33221 112 3456
Q ss_pred EEEecCCCe----eeeeeccCCCcccCcceEEEEEeCCeEEEEeCCCeEEEEEec
Q 008820 487 SVQELAGDE----FEEDVIPTGAIPCGSVITALLYWQGKLFVGCADRTVKIALCN 537 (552)
Q Consensus 487 ~iwd~~~~~----~~~~~~~~~~~~~~~~v~~l~~~~~~l~s~s~Dg~v~iw~~~ 537 (552)
+.+|..+++ .......... +.+....++.+++++.||.++.++..
T Consensus 230 ~~ld~~tG~~~~~~~W~~~~~~~------~~sp~~~~g~lyv~~~~G~l~al~~~ 278 (369)
T 2hz6_A 230 RYLTFMSGEVGRITKWKYPFPKE------TEAKSKLTPTLYVGKYSTSLYASPSM 278 (369)
T ss_dssp HHHHHHHHHHHHHHTSCCCCCCH------HHHHHHSEEEECBEECSSCEECCEEE
T ss_pred eeeehhcCCcccceeeeeccCcc------ccccccccceEEEecccCCEEecCcc
Confidence 677776665 4433332211 11111235779999999999998876
No 439
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.25 E-value=2e-09 Score=114.49 Aligned_cols=279 Identities=11% Similarity=0.074 Sum_probs=179.7
Q ss_pred EcCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCC-----------eEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCC
Q 008820 260 VGGGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHK-----------VMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGH 328 (552)
Q Consensus 260 ~s~~~l~s~s~dg~I~iwd~~~~~~~~~~~~h~~~-----------v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~ 328 (552)
..+..++.++.++.|..+|..+|+.+.++...... ...+++. + ..++.++.|+.+..+|..+++..
T Consensus 75 v~~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~--~-~~v~v~~~dg~l~alD~~tG~~~ 151 (677)
T 1kb0_A 75 VVDGIMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALW--K-GKVYVGAWDGRLIALDAATGKEV 151 (677)
T ss_dssp EETTEEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEE--T-TEEEEECTTSEEEEEETTTCCEE
T ss_pred EECCEEEEECCCCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEE--C-CEEEEEcCCCEEEEEECCCCCEE
Confidence 34778888888999999999999999998654220 1223332 2 36778889999999999988765
Q ss_pred cccccc-ccCCCceeeeEEEEeeCCCEEEEeeC------CCcEEEEECCCCceeEEecCCCCC-----------------
Q 008820 329 EPLKKW-NEEKDWRYSGIHALTTSGRYLYTGSG------DRTIKAWSLLDGTLSCTMSGHKSA----------------- 384 (552)
Q Consensus 329 ~~~~~~-~~~~~~~~~~~~~~~~~~~~l~sgs~------dg~i~iwd~~~~~~~~~~~~h~~~----------------- 384 (552)
...... .......... .....+..+++++. +|.|+.+|..+|+.+..+......
T Consensus 152 W~~~~~~~~~~~~~~~~--~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w 229 (677)
T 1kb0_A 152 WHQNTFEGQKGSLTITG--APRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTW 229 (677)
T ss_dssp EEEETTTTCCSSCBCCS--CCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTS
T ss_pred eeecCCcCcCcCccccc--CcEEECCEEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCccccccccccccccccc
Confidence 544432 1000000000 01112455666553 799999999999999887542211
Q ss_pred ---------------eEEEEEe--CCEEEEEeCCC-------------------cEEEEECCCCceeEEEecCCCC----
Q 008820 385 ---------------VSTLAVC--NGVLYSGSRDG-------------------TIRLWSLSDHSLLTVLEEDSSG---- 424 (552)
Q Consensus 385 ---------------v~~l~~~--~~~l~s~~~dg-------------------~i~iwd~~~~~~~~~~~~~~~~---- 424 (552)
...++++ .+.++.+..++ +|..+|.++|+.+..+...+..
T Consensus 230 ~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~ 309 (677)
T 1kb0_A 230 DPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDY 309 (677)
T ss_dssp CGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCC
T ss_pred cccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCccccc
Confidence 1246666 45888777664 5999999999999888753221
Q ss_pred ---ceEEEEEEcCCC---CEEEEEECCCcEEEEeCC--cceeeeeccc-----------ce-------------------
Q 008820 425 ---AVSSVLSLTAVQ---HTLVVSHESGSIKVWRND--KFMKSMQTHK-----------GS------------------- 466 (552)
Q Consensus 425 ---~~~~~~~~s~~~---~~l~~g~~dg~i~iwd~~--~~~~~~~~h~-----------~~------------------- 466 (552)
....+.....+| ..++.++.+|.++++|.. +.+..+.... .+
T Consensus 310 ~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~ 389 (677)
T 1kb0_A 310 TSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGP 389 (677)
T ss_dssp CCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCT
T ss_pred ccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCc
Confidence 111223344467 688999999999999954 3433322110 01
Q ss_pred -------EEEEEecCCEEEEEeC-------------------------------------------CCeEEEEecCCCee
Q 008820 467 -------VFAVFLEGKWLFTGGW-------------------------------------------DKTVSVQELAGDEF 496 (552)
Q Consensus 467 -------v~~v~~~~~~l~sgs~-------------------------------------------dg~i~iwd~~~~~~ 496 (552)
-.++++++.++++... .|.|..||+.+++.
T Consensus 390 ~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~ 469 (677)
T 1kb0_A 390 YGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKA 469 (677)
T ss_dssp TCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEE
T ss_pred ccccCCCCceEcCCCCEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcE
Confidence 1234456677776543 27899999999988
Q ss_pred eeeeccCCCcccCcceEEEEEeCCeEEEEeCCCeEEEEEecCCcceeEEEec
Q 008820 497 EEDVIPTGAIPCGSVITALLYWQGKLFVGCADRTVKIALCNRQIPEIFSLLL 548 (552)
Q Consensus 497 ~~~~~~~~~~~~~~~v~~l~~~~~~l~s~s~Dg~v~iw~~~~~~~~~~~~~g 548 (552)
.......... .. ..+...++.+++++.||.+++||.. +++.+.++.-
T Consensus 470 ~W~~~~~~~~--~~--g~~~~~g~~v~~g~~dg~l~a~D~~-tG~~lw~~~~ 516 (677)
T 1kb0_A 470 AWSVEHVSPW--NG--GTLTTAGNVVFQGTADGRLVAYHAA-TGEKLWEAPT 516 (677)
T ss_dssp EEEEEESSSC--CC--CEEEETTTEEEEECTTSEEEEEETT-TCCEEEEEEC
T ss_pred EeecCCCCCC--cC--cceEeCCCEEEEECCCCcEEEEECC-CCceeeeeeC
Confidence 8776543211 11 1233346788899999999999998 6777777753
No 440
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.25 E-value=5.7e-09 Score=103.33 Aligned_cols=263 Identities=13% Similarity=0.012 Sum_probs=176.6
Q ss_pred CcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCCEEEEEc---------CCCcEEEEeCCCCCCCccccccccCCC--c
Q 008820 272 KSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGD---------SGGGIFVWSFSFPLGHEPLKKWNEEKD--W 340 (552)
Q Consensus 272 g~I~iwd~~~~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~---------~dg~i~vwd~~~~~~~~~~~~~~~~~~--~ 340 (552)
++|.+.|..+++.+.++..-..+ .++++|++..++++.. .++.|.++|..+.+....+........ .
T Consensus 99 ~~VsVID~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g 176 (426)
T 3c75_H 99 TQQFVIDGSTGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVG 176 (426)
T ss_dssp EEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBS
T ss_pred CeEEEEECCCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccC
Confidence 68999999999999999866666 8999999987777653 477999999988765444432100000 0
Q ss_pred eeeeEEEEeeCCCEEEEeeC--CCcEEEEECCCCceeEEecCCCCCeEEEEEe-CCEEEEEeCCCcEEEEECCCCceeEE
Q 008820 341 RYSGIHALTTSGRYLYTGSG--DRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC-NGVLYSGSRDGTIRLWSLSDHSLLTV 417 (552)
Q Consensus 341 ~~~~~~~~~~~~~~l~sgs~--dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~-~~~l~s~~~dg~i~iwd~~~~~~~~~ 417 (552)
....-..+++++++++++.. ++.|.+.|+.+++.+.++.... ...+.-. ...+++.+.||++.+.+..+++....
T Consensus 177 ~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g--~~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~ 254 (426)
T 3c75_H 177 TYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPD--CYHIFPASPTVFYMNCRDGSLARVDFADGETKVT 254 (426)
T ss_dssp CCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCS--EEEEEEEETTEEEEEETTSSEEEEECCTTCCEEE
T ss_pred CCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCC--ceeeccCCCcEEEEEcCCCCEEEEECCCCcEEEE
Confidence 00112378999998888764 5789999999999998886422 1122222 44777888999999999966665532
Q ss_pred E----ecCCCCceEEEEEEcCCCCEEEEEECCCcEEEEeCCcc-e---eeee------------cccceEEEEEecCCEE
Q 008820 418 L----EEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDKF-M---KSMQ------------THKGSVFAVFLEGKWL 477 (552)
Q Consensus 418 ~----~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~~~-~---~~~~------------~h~~~v~~v~~~~~~l 477 (552)
. ... .........+.+++..++..+..+.+.+.|.... . ..+. ........++++++.+
T Consensus 255 ~~~~~~v~-~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rl 333 (426)
T 3c75_H 255 NTEVFHTE-DELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRI 333 (426)
T ss_dssp ECCCCSCT-TSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEE
T ss_pred eeeeeccC-CCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEE
Confidence 2 111 1111112467888888877788899999996421 1 1111 1111124667788877
Q ss_pred EEEeC----------CCeEEEEecCCCeeeeeeccCCCcccCcceEEEEEeC--C-eEEEEe-CCCeEEEEEecCCccee
Q 008820 478 FTGGW----------DKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQ--G-KLFVGC-ADRTVKIALCNRQIPEI 543 (552)
Q Consensus 478 ~sgs~----------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~~--~-~l~s~s-~Dg~v~iw~~~~~~~~~ 543 (552)
+.... ++.|.+.|..+.+....+.. ......+.|++ . +++++. .++.|.++|.. +.+.+
T Consensus 334 yVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~v------g~~P~gia~spDg~~~lyv~n~~s~~VsVID~~-t~kvv 406 (426)
T 3c75_H 334 YLLVDQRDEWKHKAASRFVVVLNAETGERINKIEL------GHEIDSINVSQDAEPLLYALSAGTQTLHIYDAA-TGEEL 406 (426)
T ss_dssp EEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEE------EEEECEEEECCSSSCEEEEEETTTTEEEEEETT-TCCEE
T ss_pred EEEecccccccccCCCCEEEEEECCCCeEEEEEEC------CCCcCeEEEccCCCEEEEEEcCCCCeEEEEECC-CCCEE
Confidence 76542 35799999999887766543 23477888884 3 577777 59999999997 56666
Q ss_pred EEE
Q 008820 544 FSL 546 (552)
Q Consensus 544 ~~~ 546 (552)
.++
T Consensus 407 ~tI 409 (426)
T 3c75_H 407 RSV 409 (426)
T ss_dssp EEE
T ss_pred EEe
Confidence 665
No 441
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.25 E-value=6.1e-09 Score=110.98 Aligned_cols=268 Identities=13% Similarity=0.068 Sum_probs=169.1
Q ss_pred eEEEeeCCCeEEEEEeecCccc----------e-EEEEEcCCEEEEEeCCCcEEEEeCCCCeEEEEEeCC--CC---CeE
Q 008820 233 DLVNGLSKGNVKFKDLQGHRDC----------V-TGLAVGGGFLFSSSFDKSIHVWSLKDFSHVHTFKGH--DH---KVM 296 (552)
Q Consensus 233 ~~~~~~~~~~~~~~~l~~H~~~----------V-~~l~~s~~~l~s~s~dg~I~iwd~~~~~~~~~~~~h--~~---~v~ 296 (552)
.+..........+|.+..+... + ..+++.+..++.++.|+.|..+|.++|+.+..+... .. .+.
T Consensus 81 ~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~ 160 (689)
T 1yiq_A 81 VVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVLDGRLEAIDAKTGQRAWSVDTRADHKRSYTIT 160 (689)
T ss_dssp CEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECTTSEEEEEETTTCCEEEEEECCSCTTSCCBCC
T ss_pred eEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEccCCEEEEEECCCCCEeeeecCcCCCCCCcccc
Confidence 3444444445567887654321 1 234556888999999999999999999999888653 11 111
Q ss_pred E-EEEecCCCCEEEEEc------CCCcEEEEeCCCCCCCccccccccCC--------------------------Cceee
Q 008820 297 A-VVYVDEDQPLCISGD------SGGGIFVWSFSFPLGHEPLKKWNEEK--------------------------DWRYS 343 (552)
Q Consensus 297 ~-v~~~~~~~~~l~s~~------~dg~i~vwd~~~~~~~~~~~~~~~~~--------------------------~~~~~ 343 (552)
+ ... . ++.+ +.++ .+|.|..||..+++............ ....-
T Consensus 161 ~sP~v-~-~g~v-~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w 237 (689)
T 1yiq_A 161 GAPRV-V-NGKV-VIGNGGAEFGVRGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAW 237 (689)
T ss_dssp SCCEE-E-TTEE-EECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCC
T ss_pred CCcEE-E-CCEE-EEEeCCCccCCCCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCCceeeecCCCCccc
Confidence 1 111 1 3333 3443 37899999999887554433211000 00001
Q ss_pred eEEEEeeCCCEEEEeeCCCc-------------------EEEEECCCCceeEEecC--CC-------CCeEEEEEe-CC-
Q 008820 344 GIHALTTSGRYLYTGSGDRT-------------------IKAWSLLDGTLSCTMSG--HK-------SAVSTLAVC-NG- 393 (552)
Q Consensus 344 ~~~~~~~~~~~l~sgs~dg~-------------------i~iwd~~~~~~~~~~~~--h~-------~~v~~l~~~-~~- 393 (552)
...++.++.+.++.++.++. |..+|.++|+.+..+.. |. .+....... ++
T Consensus 238 ~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~ 317 (689)
T 1yiq_A 238 DSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGK 317 (689)
T ss_dssp SCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTE
T ss_pred cceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCc
Confidence 13466777788888887764 99999999999998754 21 112112221 33
Q ss_pred ---EEEEEeCCCcEEEEECCCCceeEEEecCCCCc-------------------------------------eEEEEEEc
Q 008820 394 ---VLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGA-------------------------------------VSSVLSLT 433 (552)
Q Consensus 394 ---~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~-------------------------------------~~~~~~~s 433 (552)
.++.++.+|.++++|.++|+.+.......... ....++++
T Consensus 318 ~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~d 397 (689)
T 1yiq_A 318 PRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYN 397 (689)
T ss_dssp EEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEE
T ss_pred EEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceEC
Confidence 68899999999999999999886544321000 01114788
Q ss_pred CCCCEEEEEEC---------------------------------------------CCcEEEEeCCc--ceeeeecccce
Q 008820 434 AVQHTLVVSHE---------------------------------------------SGSIKVWRNDK--FMKSMQTHKGS 466 (552)
Q Consensus 434 ~~~~~l~~g~~---------------------------------------------dg~i~iwd~~~--~~~~~~~h~~~ 466 (552)
|+..++++... +|.|+.||+.+ .+..+..+...
T Consensus 398 p~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~ 477 (689)
T 1yiq_A 398 PDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVTIF 477 (689)
T ss_dssp TTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESSSC
T ss_pred CCCCEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCCCCc
Confidence 88888887632 36788999654 34444433322
Q ss_pred EE-EEEecCCEEEEEeCCCeEEEEecCCCeeeeeeccC
Q 008820 467 VF-AVFLEGKWLFTGGWDKTVSVQELAGDEFEEDVIPT 503 (552)
Q Consensus 467 v~-~v~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~ 503 (552)
.. .+...+..++.|+.||.++.||.++++....+...
T Consensus 478 ~~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~~~ 515 (689)
T 1yiq_A 478 NGGTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQPAA 515 (689)
T ss_dssp CCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECS
T ss_pred cCccceECCCEEEEECCCCcEEEEECCCCccceeeeCC
Confidence 11 34457889999999999999999999988776654
No 442
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.24 E-value=2.5e-09 Score=113.95 Aligned_cols=280 Identities=11% Similarity=0.080 Sum_probs=176.9
Q ss_pred EcCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCC----------e-EEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCC
Q 008820 260 VGGGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHK----------V-MAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGH 328 (552)
Q Consensus 260 ~s~~~l~s~s~dg~I~iwd~~~~~~~~~~~~h~~~----------v-~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~ 328 (552)
..+..++.++.++.|..+|..+|+.+..+..+... + ..+++. + ..++.++.|+.|..+|..+++..
T Consensus 68 v~~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~--~-g~v~v~~~dg~l~AlDa~TG~~~ 144 (689)
T 1yiq_A 68 VVDGVMYTTGPFSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVW--K-GKVYVGVLDGRLEAIDAKTGQRA 144 (689)
T ss_dssp EETTEEEEECGGGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEE--T-TEEEEECTTSEEEEEETTTCCEE
T ss_pred EECCEEEEEcCCCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEE--C-CEEEEEccCCEEEEEECCCCCEe
Confidence 34788888888999999999999999998654321 1 122221 2 36778889999999999988765
Q ss_pred cccccc-ccCCCceeeeEEEEeeCCCEEEEee------CCCcEEEEECCCCceeEEecCCC-------------------
Q 008820 329 EPLKKW-NEEKDWRYSGIHALTTSGRYLYTGS------GDRTIKAWSLLDGTLSCTMSGHK------------------- 382 (552)
Q Consensus 329 ~~~~~~-~~~~~~~~~~~~~~~~~~~~l~sgs------~dg~i~iwd~~~~~~~~~~~~h~------------------- 382 (552)
...... ........... -...+ ..+++++ .+|.|+.||.++|+.+..+....
T Consensus 145 W~~~~~~~~~~~~~~~~s-P~v~~-g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~ 222 (689)
T 1yiq_A 145 WSVDTRADHKRSYTITGA-PRVVN-GKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTW 222 (689)
T ss_dssp EEEECCSCTTSCCBCCSC-CEEET-TEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTC
T ss_pred eeecCcCCCCCCccccCC-cEEEC-CEEEEEeCCCccCCCCEEEEEECCCCcEEEEecccCCCccccccccccccccccc
Confidence 444332 11000000000 01123 4455554 37899999999999998875210
Q ss_pred ------------CCeEEEEEe--CCEEEEEeCCCc-------------------EEEEECCCCceeEEEecCCCC-----
Q 008820 383 ------------SAVSTLAVC--NGVLYSGSRDGT-------------------IRLWSLSDHSLLTVLEEDSSG----- 424 (552)
Q Consensus 383 ------------~~v~~l~~~--~~~l~s~~~dg~-------------------i~iwd~~~~~~~~~~~~~~~~----- 424 (552)
.....++++ .++++.+..++. |..+|.++|+.+..+...+..
T Consensus 223 ~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~ 302 (689)
T 1yiq_A 223 FGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYT 302 (689)
T ss_dssp CSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCC
T ss_pred CCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCccccccc
Confidence 011246676 468888887764 999999999999888753211
Q ss_pred --ceEEEEEEcCCCC---EEEEEECCCcEEEEeCC--cceeeeec-------c---------------------cc----
Q 008820 425 --AVSSVLSLTAVQH---TLVVSHESGSIKVWRND--KFMKSMQT-------H---------------------KG---- 465 (552)
Q Consensus 425 --~~~~~~~~s~~~~---~l~~g~~dg~i~iwd~~--~~~~~~~~-------h---------------------~~---- 465 (552)
..........+|+ .++.++.+|.++++|.. +.+..... + ..
T Consensus 303 ~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~ 382 (689)
T 1yiq_A 303 ATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVT 382 (689)
T ss_dssp CCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEES
T ss_pred CCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeC
Confidence 1111123334554 78889999999999954 33311110 0 00
Q ss_pred ---------eEEEEEecCCEEEEEeC---------------------------------------------CCeEEEEec
Q 008820 466 ---------SVFAVFLEGKWLFTGGW---------------------------------------------DKTVSVQEL 491 (552)
Q Consensus 466 ---------~v~~v~~~~~~l~sgs~---------------------------------------------dg~i~iwd~ 491 (552)
.-.+++++...+++.+. +|.|+.||+
T Consensus 383 p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~ 462 (689)
T 1yiq_A 383 PAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDP 462 (689)
T ss_dssp SCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEET
T ss_pred CCcccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEEC
Confidence 00234445556665422 478999999
Q ss_pred CCCeeeeeeccCCCcccCcceEEEEEeCCeEEEEeCCCeEEEEEecCCcceeEEEecc
Q 008820 492 AGDEFEEDVIPTGAIPCGSVITALLYWQGKLFVGCADRTVKIALCNRQIPEIFSLLLH 549 (552)
Q Consensus 492 ~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~l~s~s~Dg~v~iw~~~~~~~~~~~~~gh 549 (552)
.+++........... .. ..+...++.+++|+.||.++.||.+ +++.+.++...
T Consensus 463 ~tG~~~W~~~~~~~~--~~--g~~~tagglvf~gt~dg~l~a~D~~-tG~~lw~~~~~ 515 (689)
T 1yiq_A 463 VKQQAAWEVPYVTIF--NG--GTLSTAGNLVFEGSADGRVIAYAAD-TGEKLWEQPAA 515 (689)
T ss_dssp TTTEEEEEEEESSSC--CC--CEEEETTTEEEEECTTSEEEEEETT-TCCEEEEEECS
T ss_pred CCCCeEeEccCCCCc--cC--ccceECCCEEEEECCCCcEEEEECC-CCccceeeeCC
Confidence 999888776543221 11 1333447889999999999999998 67788777644
No 443
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=99.24 E-value=2.1e-12 Score=124.44 Aligned_cols=102 Identities=20% Similarity=0.327 Sum_probs=70.1
Q ss_pred hhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cch
Q 008820 14 AKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFT 90 (552)
Q Consensus 14 ~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~ 90 (552)
.|+. |+++.+.... .....||+.|+|||++.. ....+.++|||||||+||||++|+ ||.
T Consensus 179 ~kl~dfg~~~~~~~~~----~~~~~~~~~y~aPE~~~~--------------~~~~~~~~Di~slG~il~~l~~g~~pf~ 240 (312)
T 2iwi_A 179 AKLIDFGSGALLHDEP----YTDFDGTRVYSPPEWISR--------------HQYHALPATVWSLGILLYDMVCGDIPFE 240 (312)
T ss_dssp EEECCCSSCEECCSSC----BCCCCSCTTTSCHHHHHH--------------SCBCHHHHHHHHHHHHHHHHHHSSCSCC
T ss_pred EEEEEcchhhhcccCc----ccccCCcccccCceeeec--------------CCCCCccchHHHHHHHHHHHHHCCCCCC
Confidence 4555 4555554432 456789999999999831 122245899999999999999999 996
Q ss_pred HHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 91 KELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
..... +. .. ..........+.+++.+||+.+|.+||++.++.+
T Consensus 241 ~~~~~-~~---~~-----------------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~ 283 (312)
T 2iwi_A 241 RDQEI-LE---AE-----------------------LHFPAHVSPDCCALIRRCLAPKPSSRPSLEEILL 283 (312)
T ss_dssp SHHHH-HH---TC-----------------------CCCCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred ChHHH-hh---hc-----------------------cCCcccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 53321 00 00 0001112335889999999999999999988765
No 444
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=99.24 E-value=2.4e-12 Score=124.48 Aligned_cols=134 Identities=18% Similarity=0.166 Sum_probs=72.9
Q ss_pred hhhcc--cccccccccch-hhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-C
Q 008820 13 VAKVG--CVGSRICDKEV-GLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-Q 88 (552)
Q Consensus 13 ~~~~~--~~~~~~~~~~~-~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-p 88 (552)
.+|+. |+++.+..... ........||+.|+|||++. + ...+++++|||||||+||||++|+ |
T Consensus 159 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~------~--------~~~~~~~~Di~slG~il~el~~g~~p 224 (320)
T 2i6l_A 159 VLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLL------S--------PNNYTKAIDMWAAGCIFAEMLTGKTL 224 (320)
T ss_dssp EEEECCCTTCBCC--------CCCGGGSCCTTCCHHHHH------C--------TTCCCHHHHHHHHHHHHHHHHHSSCS
T ss_pred eEEEccCccccccCCCcccccccccccccccccCcHHhc------C--------cccCCchhhhHhHHHHHHHHHhCCCC
Confidence 45565 55555443211 11245667899999999982 1 245678999999999999999999 9
Q ss_pred chHHHhhhh-hhc-cccCCC--chhh-hhhh-hHHHHHHHHH--H-HhhhhcCccccHHHHHHhhcccCCCCCcchhhHH
Q 008820 89 FTKELIDYI-RCV-STKASD--DNIA-CLGM-YMAWMEKVTY--L-LENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVW 159 (552)
Q Consensus 89 f~~~~~~~~-~~~-~~~~~~--~~~~-~~~~-~~~~~~~~~~--~-~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~ 159 (552)
|........ ..+ .....+ ..+. .... +......... . ..........++.+++.+||+.+|.+||++.++.
T Consensus 225 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell 304 (320)
T 2i6l_A 225 FAGAHELEQMQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEAL 304 (320)
T ss_dssp SCCSSHHHHHHHHHHHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHH
T ss_pred CCCCCHHHHHHHHHHhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHh
Confidence 965432211 100 000000 0000 0000 0000000000 0 0011122345699999999999999999988775
Q ss_pred H
Q 008820 160 K 160 (552)
Q Consensus 160 ~ 160 (552)
+
T Consensus 305 ~ 305 (320)
T 2i6l_A 305 S 305 (320)
T ss_dssp T
T ss_pred C
Confidence 5
No 445
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=99.23 E-value=5.7e-12 Score=122.16 Aligned_cols=129 Identities=15% Similarity=0.206 Sum_probs=78.8
Q ss_pred hhcc--cccccccccchh-hhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cc
Q 008820 14 AKVG--CVGSRICDKEVG-LFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QF 89 (552)
Q Consensus 14 ~~~~--~~~~~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf 89 (552)
.|+. |+++.+...... .......||+.|+|||++. ...++.++|||||||+||||+||+ ||
T Consensus 184 ~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~---------------~~~~~~~~Di~slG~il~el~tg~~~~ 248 (326)
T 2w1i_A 184 VKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLT---------------ESKFSVASDVWSFGVVLYELFTYIEKS 248 (326)
T ss_dssp EEECCCTTCEECCSSCSEEECSSCCSCCGGGCCHHHHH---------------HCEEEHHHHHHHHHHHHHHHHHTTCGG
T ss_pred EEEecCcchhhccccccccccccCCCCceeEECchhhc---------------CCCCCchhhHHHHHHHHHHHHhcCCCC
Confidence 4455 455554433221 1234467889999999992 244678999999999999999999 98
Q ss_pred hHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHh-----hhhcCccccHHHHHHhhcccCCCCCcchhhHHHHHHh
Q 008820 90 TKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLE-----NKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWKCIRE 164 (552)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~~l~~ 164 (552)
..........+..... ............. +.......++.+++.+||+.+|.+||++.++.+.+.+
T Consensus 249 ~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~ 319 (326)
T 2w1i_A 249 KSPPAEFMRMIGNDKQ---------GQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQ 319 (326)
T ss_dssp GSHHHHHHHHHCTTCC---------THHHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHH
T ss_pred CCCHHHHHHhhccccc---------hhhhHHHHHHHhhcCCCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 6533221110000000 0011111111111 1112234569999999999999999999999998877
Q ss_pred hh
Q 008820 165 LI 166 (552)
Q Consensus 165 ~~ 166 (552)
+.
T Consensus 320 l~ 321 (326)
T 2w1i_A 320 IR 321 (326)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 446
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=99.23 E-value=3.8e-12 Score=121.95 Aligned_cols=101 Identities=15% Similarity=0.179 Sum_probs=62.9
Q ss_pred hhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhhhhhhccccCCCchhh
Q 008820 32 LSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDYIRCVSTKASDDNIA 110 (552)
Q Consensus 32 ~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~~~~~~~~~~~~~~~~ 110 (552)
.....||+.|+|||++...... ...++.++|||||||++|+|++|+ ||.........
T Consensus 174 ~~~~~~~~~y~aPE~~~~~~~~----------~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~------------ 231 (302)
T 2j7t_A 174 RDSFIGTPYWMAPEVVMCETMK----------DTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVL------------ 231 (302)
T ss_dssp -----CCGGGCCHHHHHHHHTT----------STTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHH------------
T ss_pred cccccCChhhcCCeeeccccCC----------CCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHHH------------
Confidence 3456899999999998432211 245678999999999999999999 99654322110
Q ss_pred hhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 111 CLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
........ ............+.+++.+||+.+|.+||++.++.+
T Consensus 232 -----~~~~~~~~-~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 275 (302)
T 2j7t_A 232 -----LKIAKSDP-PTLLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLE 275 (302)
T ss_dssp -----HHHHHSCC-CCCSSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred -----HHHhccCC-cccCCccccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 00000000 000001112345889999999999999999877544
No 447
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=99.23 E-value=2.1e-13 Score=132.49 Aligned_cols=116 Identities=20% Similarity=0.207 Sum_probs=53.9
Q ss_pred hhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cch
Q 008820 14 AKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFT 90 (552)
Q Consensus 14 ~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~ 90 (552)
.|++ |+++.+..... .....||+.|+|||++.... ....++.++|||||||+||+|++|+ ||.
T Consensus 165 ~kl~Dfg~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~-----------~~~~~~~~~Di~slG~il~~l~~g~~pf~ 230 (327)
T 3aln_A 165 IKLCDFGISGQLVDSIA---KTRDAGCRPYMAPERIDPSA-----------SRQGYDVRSDVWSLGITLYELATGRFPYP 230 (327)
T ss_dssp EEECCCSSSCC--------------------------------------------CCSHHHHHHHHHHHHHHHHSCCCSS
T ss_pred EEEccCCCceecccccc---cccCCCCccccCceeecccc-----------CcCCCCchhhHHHHHHHHHHHHHCCCCCC
Confidence 5555 55655544322 34558999999999982211 1244678999999999999999999 996
Q ss_pred HHHh--hhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 91 KELI--DYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 91 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
.... ..+..+... .+ +..+..........+.+++.+||+.+|.+||++.++.+
T Consensus 231 ~~~~~~~~~~~~~~~-~~----------------~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 285 (327)
T 3aln_A 231 KWNSVFDQLTQVVKG-DP----------------PQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLK 285 (327)
T ss_dssp CC-------CCCCCS-CC----------------CCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CcchHHHHHHHHhcC-CC----------------CCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHh
Confidence 5221 111100000 00 00000111123445889999999999999999887654
No 448
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.22 E-value=1.8e-08 Score=96.48 Aligned_cols=241 Identities=13% Similarity=0.069 Sum_probs=150.1
Q ss_pred ecCccceEEEEEc--CCEEEE-------EeCCCcEEEEeCCCCeEEEEEe----CCCCCeEEEEEecCCCCEEEEEcCCC
Q 008820 249 QGHRDCVTGLAVG--GGFLFS-------SSFDKSIHVWSLKDFSHVHTFK----GHDHKVMAVVYVDEDQPLCISGDSGG 315 (552)
Q Consensus 249 ~~H~~~V~~l~~s--~~~l~s-------~s~dg~I~iwd~~~~~~~~~~~----~h~~~v~~v~~~~~~~~~l~s~~~dg 315 (552)
.+.-....+++|+ +..+++ +..++.|.+||..+++...... ++...+.++++.++++.++++.. ++
T Consensus 14 ~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~-~~ 92 (314)
T 1pjx_A 14 TEDIPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADM-RL 92 (314)
T ss_dssp ECCCTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEET-TT
T ss_pred hccCCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEEC-CC
Confidence 3344566788997 666666 5778899999988877643322 24567899999887344544444 44
Q ss_pred cEEEEeCCCCCCCcc-ccccccCCCceeeeEEEEeeCCCEEEEeeCC---------------CcEEEEECCCCceeEEec
Q 008820 316 GIFVWSFSFPLGHEP-LKKWNEEKDWRYSGIHALTTSGRYLYTGSGD---------------RTIKAWSLLDGTLSCTMS 379 (552)
Q Consensus 316 ~i~vwd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~d---------------g~i~iwd~~~~~~~~~~~ 379 (552)
.|.+||.+ ++.... ...... .........++.++++..++...+ +.|..||.. ++......
T Consensus 93 ~l~~~d~~-g~~~~~~~~~~~~-~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~ 169 (314)
T 1pjx_A 93 GLLVVQTD-GTFEEIAKKDSEG-RRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDT 169 (314)
T ss_dssp EEEEEETT-SCEEECCSBCTTS-CBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEE
T ss_pred CEEEEeCC-CCEEEEEeccCCC-ccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEecc
Confidence 78899987 432211 111111 111112234667788777666554 567777765 55443322
Q ss_pred CCCCCeEEEEEe----CC--EEEEE-eCCCcEEEEECC-CCcee--EEEec-CCCC-ceEEEEEEcCCCCEEEEEECCCc
Q 008820 380 GHKSAVSTLAVC----NG--VLYSG-SRDGTIRLWSLS-DHSLL--TVLEE-DSSG-AVSSVLSLTAVQHTLVVSHESGS 447 (552)
Q Consensus 380 ~h~~~v~~l~~~----~~--~l~s~-~~dg~i~iwd~~-~~~~~--~~~~~-~~~~-~~~~~~~~s~~~~~l~~g~~dg~ 447 (552)
+......++++ ++ .++.+ ..++.|.+||+. +++.. ..+.. .... .....++++++|+++++...++.
T Consensus 170 -~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~ 248 (314)
T 1pjx_A 170 -AFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSH 248 (314)
T ss_dssp -EESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTE
T ss_pred -CCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCE
Confidence 33446788887 44 45544 567899999986 44421 11111 1111 22333689999998888878899
Q ss_pred EEEEeCC--cceeeeecccceEEEEEe--cCCEEEE-EeCCCeEEEEecCCC
Q 008820 448 IKVWRND--KFMKSMQTHKGSVFAVFL--EGKWLFT-GGWDKTVSVQELAGD 494 (552)
Q Consensus 448 i~iwd~~--~~~~~~~~h~~~v~~v~~--~~~~l~s-gs~dg~i~iwd~~~~ 494 (552)
|.+||.. +....+..+...+.++.+ +++.|+. ...++.|..|++...
T Consensus 249 i~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~~ 300 (314)
T 1pjx_A 249 IEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQRN 300 (314)
T ss_dssp EEEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSSC
T ss_pred EEEEcCCCCcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCCC
Confidence 9999965 455666666677888876 7885554 455689999998753
No 449
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=99.20 E-value=2.5e-12 Score=123.33 Aligned_cols=104 Identities=17% Similarity=0.292 Sum_probs=62.3
Q ss_pred hhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhhhhhhccccCCCchhh
Q 008820 32 LSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDYIRCVSTKASDDNIA 110 (552)
Q Consensus 32 ~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~~~~~~~~~~~~~~~~ 110 (552)
.....||+.|+|||++.. ...+++++|||||||+||||++|+ ||.............+..+.
T Consensus 183 ~~~~~~~~~y~aPE~~~~--------------~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~--- 245 (303)
T 2vwi_A 183 RKTFVGTPCWMAPEVMEQ--------------VRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPP--- 245 (303)
T ss_dssp -----CCCTTCCHHHHHH--------------HHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHTSSCC---
T ss_pred hcccCCCccccCHHHhcc--------------ccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHHHhccCCC---
Confidence 356789999999999832 123568999999999999999999 99653322110000000000
Q ss_pred hhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 111 CLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
....... ..........++.+++.+||+.+|.+||++.++.+
T Consensus 246 ------~~~~~~~--~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 287 (303)
T 2vwi_A 246 ------SLETGVQ--DKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLR 287 (303)
T ss_dssp ------CTTC-------CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred ------ccccccc--cchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 0000000 00111223445899999999999999999887665
No 450
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.20 E-value=9.8e-09 Score=109.16 Aligned_cols=269 Identities=11% Similarity=0.062 Sum_probs=171.6
Q ss_pred ceEEEeeCCCeEEEEEeecCcc-----------ceEEEEEcCCEEEEEeCCCcEEEEeCCCCeEEEEEeCC-C----CCe
Q 008820 232 KDLVNGLSKGNVKFKDLQGHRD-----------CVTGLAVGGGFLFSSSFDKSIHVWSLKDFSHVHTFKGH-D----HKV 295 (552)
Q Consensus 232 ~~~~~~~~~~~~~~~~l~~H~~-----------~V~~l~~s~~~l~s~s~dg~I~iwd~~~~~~~~~~~~h-~----~~v 295 (552)
..+..........+|++..... .-..+++.+..++.++.|+.|..+|..+|+.+..+..+ . ..+
T Consensus 87 ~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~ 166 (677)
T 1kb0_A 87 SVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAWDGRLIALDAATGKEVWHQNTFEGQKGSLTI 166 (677)
T ss_dssp GCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECTTSEEEEEETTTCCEEEEEETTTTCCSSCBC
T ss_pred CeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEEEEEcCCCEEEEEECCCCCEEeeecCCcCcCcCccc
Confidence 3344444455566888765432 11345566889999999999999999999999998765 2 112
Q ss_pred EEEEEecCCCCEEEEEcC------CCcEEEEeCCCCCCCccccccccCC---------------------------Ccee
Q 008820 296 MAVVYVDEDQPLCISGDS------GGGIFVWSFSFPLGHEPLKKWNEEK---------------------------DWRY 342 (552)
Q Consensus 296 ~~v~~~~~~~~~l~s~~~------dg~i~vwd~~~~~~~~~~~~~~~~~---------------------------~~~~ 342 (552)
.+--... ++ .++.++. ++.|+.+|..+++............ ....
T Consensus 167 ~~~p~v~-~~-~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~ 244 (677)
T 1kb0_A 167 TGAPRVF-KG-KVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTM 244 (677)
T ss_dssp CSCCEEE-TT-EEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCC
T ss_pred ccCcEEE-CC-EEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCccccccccccccccccccccCceeEeCCCccc
Confidence 1111111 33 3344443 7999999999887554333211110 0000
Q ss_pred eeEEEEeeCCCEEEEeeCCC-------------------cEEEEECCCCceeEEecC--CC-------CCeEEEEEe--C
Q 008820 343 SGIHALTTSGRYLYTGSGDR-------------------TIKAWSLLDGTLSCTMSG--HK-------SAVSTLAVC--N 392 (552)
Q Consensus 343 ~~~~~~~~~~~~l~sgs~dg-------------------~i~iwd~~~~~~~~~~~~--h~-------~~v~~l~~~--~ 392 (552)
-...++.++++.++.++.++ .|..+|.++|+.+..+.. |. .....+... +
T Consensus 245 w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG 324 (677)
T 1kb0_A 245 WDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAG 324 (677)
T ss_dssp CSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETT
T ss_pred ccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCC
Confidence 01246677788888877664 599999999999988753 21 111122222 2
Q ss_pred ---CEEEEEeCCCcEEEEECCCCceeEEEecCCCCce---------------------------------EEEEEEcCCC
Q 008820 393 ---GVLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAV---------------------------------SSVLSLTAVQ 436 (552)
Q Consensus 393 ---~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~---------------------------------~~~~~~s~~~ 436 (552)
+.++.++.+|.++++|..+|+.+..+........ ...++++|++
T Consensus 325 ~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~ 404 (677)
T 1kb0_A 325 KPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQT 404 (677)
T ss_dssp EEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTT
T ss_pred cEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCC
Confidence 4788999999999999999999887764321100 0124788888
Q ss_pred CEEEEEECC-------------------------------------------CcEEEEeCCc--ceeeeecccceEE--E
Q 008820 437 HTLVVSHES-------------------------------------------GSIKVWRNDK--FMKSMQTHKGSVF--A 469 (552)
Q Consensus 437 ~~l~~g~~d-------------------------------------------g~i~iwd~~~--~~~~~~~h~~~v~--~ 469 (552)
.++++...+ |.|..||..+ .+..+... .++. .
T Consensus 405 ~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~-~~~~~g~ 483 (677)
T 1kb0_A 405 GLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHV-SPWNGGT 483 (677)
T ss_dssp TEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEEES-SSCCCCE
T ss_pred CEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEeecCCC-CCCcCcc
Confidence 888876532 6789999654 33333322 2222 2
Q ss_pred EEecCCEEEEEeCCCeEEEEecCCCeeeeeeccC
Q 008820 470 VFLEGKWLFTGGWDKTVSVQELAGDEFEEDVIPT 503 (552)
Q Consensus 470 v~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~ 503 (552)
+..++..++.++.||.+++||..+++....+...
T Consensus 484 ~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~ 517 (677)
T 1kb0_A 484 LTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTG 517 (677)
T ss_dssp EEETTTEEEEECTTSEEEEEETTTCCEEEEEECS
T ss_pred eEeCCCEEEEECCCCcEEEEECCCCceeeeeeCC
Confidence 4457888999999999999999999888776654
No 451
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=99.20 E-value=2.6e-12 Score=122.18 Aligned_cols=104 Identities=18% Similarity=0.139 Sum_probs=68.0
Q ss_pred hhhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cc
Q 008820 13 VAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QF 89 (552)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf 89 (552)
..|++ |+++.+... ....||+.|+|||++ .+ ....++++|||||||+||+|++|. |+
T Consensus 172 ~~kl~Dfg~~~~~~~~------~~~~gt~~y~aPE~~------~~--------~~~~~~~~Di~slG~il~~l~~~~~~~ 231 (289)
T 1x8b_A 172 MFKIGDLGHVTRISSP------QVEEGDSRFLANEVL------QE--------NYTHLPKADIFALALTVVCAAGAEPLP 231 (289)
T ss_dssp CEEECCCTTCEETTCS------CCCCCCGGGCCHHHH------TT--------CCTTHHHHHHHHHHHHHHHHTTCCCCC
T ss_pred EEEEcccccccccCCc------cccCCCccccChhHh------cC--------CCCCCchhhHHHHHHHHHHHhcCCCCC
Confidence 45666 445544433 234599999999999 22 234567999999999999999999 55
Q ss_pred hHHH-hhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 90 TKEL-IDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 90 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
.... ...+. ... ...........+.+++.+||+.+|.+||++.++.+
T Consensus 232 ~~~~~~~~~~--~~~----------------------~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 279 (289)
T 1x8b_A 232 RNGDQWHEIR--QGR----------------------LPRIPQVLSQEFTELLKVMIHPDPERRPSAMALVK 279 (289)
T ss_dssp SSSHHHHHHH--TTC----------------------CCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred cchhHHHHHH--cCC----------------------CCCCCcccCHHHHHHHHHHhCCCcccCCCHHHHhh
Confidence 3322 11110 000 00011123445899999999999999999887654
No 452
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.19 E-value=6.1e-09 Score=112.63 Aligned_cols=234 Identities=12% Similarity=-0.037 Sum_probs=144.4
Q ss_pred CCCCeEEEEEecCCCCEEEEEcCCC----cEEEEeCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCc---
Q 008820 291 HDHKVMAVVYVDEDQPLCISGDSGG----GIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRT--- 363 (552)
Q Consensus 291 h~~~v~~v~~~~~~~~~l~s~~~dg----~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~--- 363 (552)
|...+..++|+|++..++++.+.+| .|++||+.+++..... ... ......+++++ +.|+.++.++.
T Consensus 161 ~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~--~~~----~~~~~~~wspD-~~l~~~~~~~~~~~ 233 (741)
T 1yr2_A 161 GATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADE--LKW----VKFSGLAWLGN-DALLYSRFAEPKEG 233 (741)
T ss_dssp --EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEE--EEE----EESCCCEESTT-SEEEEEECCCC---
T ss_pred CCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCcc--CCC----ceeccEEEECC-CEEEEEEecCcccc
Confidence 3346789999998887666655544 4999999877542210 000 11123478899 88888776654
Q ss_pred -----------EEEEECCCCce--eEEec--CCCCCeEEEEEe-CC-EEEEEeCC-----CcEEEEECCCC--ceeEEEe
Q 008820 364 -----------IKAWSLLDGTL--SCTMS--GHKSAVSTLAVC-NG-VLYSGSRD-----GTIRLWSLSDH--SLLTVLE 419 (552)
Q Consensus 364 -----------i~iwd~~~~~~--~~~~~--~h~~~v~~l~~~-~~-~l~s~~~d-----g~i~iwd~~~~--~~~~~~~ 419 (552)
|++|++.+++. ...+. .+...+.++.|+ ++ +|+..+.+ ..|++||+.++ +....+.
T Consensus 234 ~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~ 313 (741)
T 1yr2_A 234 QAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALI 313 (741)
T ss_dssp -----CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEE
T ss_pred cccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEec
Confidence 89999987752 22333 333458889999 44 66666644 38999999877 3144554
Q ss_pred cCCCCceEEEEEEcCCCCEEEEEECC----CcEEEEeCCcc----eeeeecccceEEEEEe-cCCEEEEEeCCCeEEEEe
Q 008820 420 EDSSGAVSSVLSLTAVQHTLVVSHES----GSIKVWRNDKF----MKSMQTHKGSVFAVFL-EGKWLFTGGWDKTVSVQE 490 (552)
Q Consensus 420 ~~~~~~~~~~~~~s~~~~~l~~g~~d----g~i~iwd~~~~----~~~~~~h~~~v~~v~~-~~~~l~sgs~dg~i~iwd 490 (552)
.+.... .. .++++++.|+..+.+ +.|.+||.... ...+..+...+..+++ ++..+++...|+..++|.
T Consensus 314 ~~~~~~-~~--~~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~~~~lv~~~~~dg~~~l~~ 390 (741)
T 1yr2_A 314 PDLKAQ-WD--FVDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIAGNRLFASYIHDAKSQVLA 390 (741)
T ss_dssp CSSSSC-EE--EEEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEEBTEEEEEEEETTEEEEEE
T ss_pred CCCCce-EE--EEeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEECCEEEEEEEECCEEEEEE
Confidence 443333 32 234888888887764 45999997542 2333445556667777 566778888899877775
Q ss_pred cC-CCeeeeeeccCCCcccCcceEEEEEeCC--eEE-EEe---CCCeEEEEEecC
Q 008820 491 LA-GDEFEEDVIPTGAIPCGSVITALLYWQG--KLF-VGC---ADRTVKIALCNR 538 (552)
Q Consensus 491 ~~-~~~~~~~~~~~~~~~~~~~v~~l~~~~~--~l~-s~s---~Dg~v~iw~~~~ 538 (552)
+. ++.....+.. +....+..++++++ .++ +.+ ..++|++||+..
T Consensus 391 ~~~~g~~~~~l~~----~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~t 441 (741)
T 1yr2_A 391 FDLDGKPAGAVSL----PGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPAT 441 (741)
T ss_dssp EETTSCEEEECBC----SSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTT
T ss_pred EeCCCCceeeccC----CCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCC
Confidence 54 2332222221 12455778888742 344 322 347899998763
No 453
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=99.19 E-value=2.3e-12 Score=126.21 Aligned_cols=124 Identities=15% Similarity=0.112 Sum_probs=70.7
Q ss_pred hhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccc-cccccchhhhhhhhhhCC-Cc
Q 008820 14 AKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGY-GSDVWPVACILLSLLIGE-QF 89 (552)
Q Consensus 14 ~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~-~sDv~SlG~~l~~lltg~-pf 89 (552)
.|++ |+++.+... ......||+.|+|||++ .+ ...++. ++|||||||++|||++|+ ||
T Consensus 191 ~kl~dfg~~~~~~~~----~~~~~~~~~~y~aPE~~------~~--------~~~~~~~~~Di~slG~il~~l~~g~~pf 252 (348)
T 2pml_X 191 VKLSDFGESEYMVDK----KIKGSRGTYEFMPPEFF------SN--------ESSYNGAKVDIWSLGICLYVMFYNVVPF 252 (348)
T ss_dssp EEECCCTTCEECBTT----EECSSCSCGGGCCGGGG------SS--------CCCEEHHHHHHHHHHHHHHHHHHSSCSS
T ss_pred EEEeccccccccccc----cccCCCCCcCccCchhh------cC--------CCCCCcchhhHHHHHHHHHHHHhCCCCC
Confidence 4555 444444333 25667899999999998 32 113444 999999999999999999 99
Q ss_pred hHHHh-hhh-hhcccc--CCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 90 TKELI-DYI-RCVSTK--ASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 90 ~~~~~-~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
..... ..+ ..+... ..|.....+ ........ ..........++.+++.+||+.+|.+||++.++.+
T Consensus 253 ~~~~~~~~~~~~i~~~~~~~~~~~~~~--~~~~~~~~---~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~ 322 (348)
T 2pml_X 253 SLKISLVELFNNIRTKNIEYPLDRNHF--LYPLTNKK---STCSNNFLSNEDIDFLKLFLRKNPAERITSEDALK 322 (348)
T ss_dssp CCSSCSHHHHHHHTSCCCCCCCSSSSS--TTTTCC-----------CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred CCCCcHHHHHHHHhccCcCCccchhhh--hccccccc---cccchhhcCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 65332 111 100000 011000000 00000000 00011223445899999999999999999887665
No 454
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=99.14 E-value=5.9e-12 Score=120.61 Aligned_cols=96 Identities=11% Similarity=0.179 Sum_probs=56.4
Q ss_pred hhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-CchHHHhhhhhhccccCCCchhh
Q 008820 32 LSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QFTKELIDYIRCVSTKASDDNIA 110 (552)
Q Consensus 32 ~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~~~~~~~~~~~~~~~~ 110 (552)
.....||+.|+|||++ .+ ...++.++|||||||+||||+++. +... ....+.
T Consensus 187 ~~~~~~~~~y~aPE~~------~~--------~~~~~~~~Di~slG~il~~l~~p~~~~~~-~~~~~~------------ 239 (303)
T 1zy4_A 187 LTSAIGTAMYVATEVL------DG--------TGHYNEKIDMYSLGIIFFEMIYPFSTGME-RVNILK------------ 239 (303)
T ss_dssp -------CTTSCHHHH------TS--------CSCCCTHHHHHHHHHHHHHHHSCCSSHHH-HHHHHH------------
T ss_pred cccCCCcccccCcccc------cC--------CCCCcchhhHHHHHHHHHHHHhccCCchh-HHHHHH------------
Confidence 4567899999999998 22 235678999999999999999944 3211 111000
Q ss_pred hhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhhHHH
Q 008820 111 CLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~~~~ 160 (552)
.+.......+..........+.+++.+||+.+|.+||++.++.+
T Consensus 240 ------~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 283 (303)
T 1zy4_A 240 ------KLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLN 283 (303)
T ss_dssp ------HHHSTTCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred ------hccccccccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhC
Confidence 00000000011111122334889999999999999999888765
No 455
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.13 E-value=1.7e-08 Score=94.49 Aligned_cols=230 Identities=8% Similarity=-0.045 Sum_probs=142.5
Q ss_pred CeEEEEEecCCCCEEE-EEcCCCcEEEEeCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCC
Q 008820 294 KVMAVVYVDEDQPLCI-SGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDG 372 (552)
Q Consensus 294 ~v~~v~~~~~~~~~l~-s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~ 372 (552)
...++++.+++. +++ +...++.|.+||..+...... . ... . ......++.++++.+++.. ++.|..||....
T Consensus 25 ~p~~i~~~~~g~-l~v~~~~~~~~i~~~~~~~~~~~~~-~-~~~--~-~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~ 97 (270)
T 1rwi_B 25 SPSGVAVDSAGN-VYVTSEGMYGRVVKLATGSTGTTVL-P-FNG--L-YQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSN 97 (270)
T ss_dssp CEEEEEECTTCC-EEEEECSSSCEEEEECC-----EEC-C-CCS--C-CSCCCEEECTTCCEEEEET-TTEEEEECTTCS
T ss_pred CccceEECCCCC-EEEEccCCCCcEEEecCCCcccceE-e-eCC--c-CCcceeEECCCCCEEEEcC-CCEEEEEeCCCc
Confidence 678899988765 656 557789999998764322111 0 000 0 1112246677788555554 889999998665
Q ss_pred ceeEEec-CCCCCeEEEEEe-CC-EEEEEeCCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEECCCcEE
Q 008820 373 TLSCTMS-GHKSAVSTLAVC-NG-VLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIK 449 (552)
Q Consensus 373 ~~~~~~~-~h~~~v~~l~~~-~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~ 449 (552)
.. ..+. .....+.+++++ ++ ++++...++.|.+||..+.......... ...... ++++++++++++...++.|.
T Consensus 98 ~~-~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~-~~~p~~-i~~~~~g~l~v~~~~~~~i~ 174 (270)
T 1rwi_B 98 NQ-TVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTG-LNDPDG-VAVDNSGNVYVTDTDNNRVV 174 (270)
T ss_dssp CC-EECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCS-CCSCCC-EEECTTCCEEEEEGGGTEEE
T ss_pred eE-eeeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeecccc-CCCcee-EEEeCCCCEEEEECCCCEEE
Confidence 43 3332 233568899998 44 5555566889999986655433221111 112233 68899999777777788999
Q ss_pred EEeCCcceee--eecccceEEEEEe--cCCEEEEEeCCCeEEEEecCCCeeeeeeccCCCcccCcceEEEEEeC-Ce-EE
Q 008820 450 VWRNDKFMKS--MQTHKGSVFAVFL--EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQ-GK-LF 523 (552)
Q Consensus 450 iwd~~~~~~~--~~~h~~~v~~v~~--~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~~-~~-l~ 523 (552)
+||....... ...+...+.++.+ +|..+++...++.|.+||..+...... .. . ....+.++++++ +. ++
T Consensus 175 ~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~-~~-~---~~~~p~~i~~~~~g~l~v 249 (270)
T 1rwi_B 175 KLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVL-PF-T---GLNTPLAVAVDSDRTVYV 249 (270)
T ss_dssp EECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEEC-CC-C---SCSCEEEEEECTTCCEEE
T ss_pred EEecCCCceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcceee-cc-C---CCCCceeEEECCCCCEEE
Confidence 9996543221 1223355666766 666666666788999999976543321 11 1 124578899984 44 55
Q ss_pred EEeCCCeEEEEEecC
Q 008820 524 VGCADRTVKIALCNR 538 (552)
Q Consensus 524 s~s~Dg~v~iw~~~~ 538 (552)
+...++.|++++...
T Consensus 250 ~~~~~~~v~~~~~~~ 264 (270)
T 1rwi_B 250 ADRGNDRVVKLTSLE 264 (270)
T ss_dssp EEGGGTEEEEECCCG
T ss_pred EECCCCEEEEEcCCC
Confidence 667799999999874
No 456
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.13 E-value=1e-09 Score=106.17 Aligned_cols=275 Identities=12% Similarity=0.037 Sum_probs=170.3
Q ss_pred EEEEEeecCccceEEEEEc-CCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEe
Q 008820 243 VKFKDLQGHRDCVTGLAVG-GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWS 321 (552)
Q Consensus 243 ~~~~~l~~H~~~V~~l~~s-~~~l~s~s~dg~I~iwd~~~~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd 321 (552)
..+|++..+.....+..+. +..++.++.++.|..|| .+++....+..+...+.++...+++ .+..++.+ +..+|
T Consensus 10 ~~~W~~~~~~~~~~~~~~d~~g~l~v~t~~~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g--~l~v~t~~--l~~~d 84 (330)
T 3hxj_A 10 KIKWEFLIGNSIDSSPILAKNGTIYLGSSNKNLYAIN-TDGSVKWFFKSGEIIECRPSIGKDG--TIYFGSDK--VYAIN 84 (330)
T ss_dssp --CCTTTSCEEECCCCEECTTSCEECSSTTTTTEEEC-TTSCEEESSCGGGEEEECCEETTTT--EECCSSCE--EEEEC
T ss_pred eEEEEEeCCCCcccCceEccCCeEEEEcCCCEEEEEC-CCCcEEEEEecCCCcccceEEecCC--cEEEecCc--EEEEC
Confidence 3455555555444556664 77788888899999999 8888876655444455666654433 34555555 88887
Q ss_pred CCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe-CCEEEEEeC
Q 008820 322 FSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC-NGVLYSGSR 400 (552)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~-~~~l~s~~~ 400 (552)
. ++....... .... . .....+. +..++.++.++.|..+|.. ++.......+...+.++... ++.++.++.
T Consensus 85 ~-~g~~~~~~~---~~~~-~-~~~~~~~--~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~~g~l~vgt~ 155 (330)
T 3hxj_A 85 P-DGTEKWRFD---TKKA-I-VSDFTIF--EDILYVTSMDGHLYAINTD-GTEKWRFKTKKAIYATPIVSEDGTIYVGSN 155 (330)
T ss_dssp C-CGGGGGGSC---C-------CCEEEE--TTEEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTSCEEEECT
T ss_pred C-CCcEEEEEE---CCCC-c-ccCceEE--CCEEEEEecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcCCCEEEEEcC
Confidence 5 332222111 1111 0 1111222 5678888889999999988 88877776666666777777 678888999
Q ss_pred CCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEECCCcEEEEeCC-cceeeeecccceEEEEEecC-CEEE
Q 008820 401 DGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRND-KFMKSMQTHKGSVFAVFLEG-KWLF 478 (552)
Q Consensus 401 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~-~~~~~~~~h~~~v~~v~~~~-~~l~ 478 (552)
++.|..+|.. ++....+..... .... +...+++.+. .++ +.|..+|.. +...........+.++..+. ..|.
T Consensus 156 ~~~l~~~d~~-g~~~~~~~~~~~-~~~~-~~~d~~g~l~-v~t--~~l~~~d~~g~~~~~~~~~~~~~~~~~~~~~g~l~ 229 (330)
T 3hxj_A 156 DNYLYAINPD-GTEKWRFKTNDA-ITSA-ASIGKDGTIY-FGS--DKVYAINPDGTEKWNFYAGYWTVTRPAISEDGTIY 229 (330)
T ss_dssp TSEEEEECTT-SCEEEEEECSSC-CCSC-CEECTTCCEE-EES--SSEEEECTTSCEEEEECCSSCCCSCCEECTTSCEE
T ss_pred CCEEEEECCC-CCEeEEEecCCC-ceee-eEEcCCCEEE-EEe--CEEEEECCCCcEEEEEccCCcceeceEECCCCeEE
Confidence 9999999998 887777765422 2222 4566677644 444 789999932 23333343444555665543 3677
Q ss_pred EEeCCCeEEEEecCCCeeeeeeccCCCcccCcceEEEEEe-CCeEEEEeCCCeEEEEEecCCcceeEE
Q 008820 479 TGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYW-QGKLFVGCADRTVKIALCNRQIPEIFS 545 (552)
Q Consensus 479 sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~-~~~l~s~s~Dg~v~iw~~~~~~~~~~~ 545 (552)
.++.++.|..+|..+. ........ ...+.++... ++.|+.++.+|.|..++. ++..+..
T Consensus 230 v~t~~~gl~~~~~~g~-~~~~~~~~-----~~~~~~~~~~~~g~l~v~t~~ggl~~~d~--~g~~~~~ 289 (330)
T 3hxj_A 230 VTSLDGHLYAINPDGT-EKWRFKTG-----KRIESSPVIGNTDTIYFGSYDGHLYAINP--DGTEKWN 289 (330)
T ss_dssp EEETTTEEEEECTTSC-EEEEEECS-----SCCCSCCEECTTSCEEEECTTCEEEEECT--TSCEEEE
T ss_pred EEcCCCeEEEECCCCC-EeEEeeCC-----CCccccceEcCCCeEEEecCCCCEEEECC--CCcEEEE
Confidence 7888889999986444 33333222 1112334445 677999999999999884 3444443
No 457
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.13 E-value=1.1e-07 Score=94.65 Aligned_cols=233 Identities=12% Similarity=0.135 Sum_probs=143.4
Q ss_pred cceEEEEEc--CCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCC--cEEEEeCCCCCCC
Q 008820 253 DCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGG--GIFVWSFSFPLGH 328 (552)
Q Consensus 253 ~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg--~i~vwd~~~~~~~ 328 (552)
.....++++ ++++++...++.|++||.+++........... .. ++|+++++ .++++..++ .|.+|+.......
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~-~~-ia~~~~g~-~l~~~d~~~~~~I~~~d~~~~~~~ 207 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFKG-GK-PAVTKDKQ-RVYSIGWEGTHTVYVYMKASGWAP 207 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETCCB-CB-CEECTTSS-EEEEEBSSTTCEEEEEEGGGTTCE
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccCCC-Cc-eeEecCCC-cEEEEecCCCceEEEEEcCCCcee
Confidence 467889998 66666666779999999988877666555333 33 89999776 455565554 7888887654332
Q ss_pred ccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCceeEE----ecCCCCCe--EEEEEeC--C-EEEEEe
Q 008820 329 EPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCT----MSGHKSAV--STLAVCN--G-VLYSGS 399 (552)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~----~~~h~~~v--~~l~~~~--~-~l~s~~ 399 (552)
..+........... .-.++++++..|+.+..++.|+.||..++..... ..++...- ..++|++ + ++++-.
T Consensus 208 ~~~g~~~~~~~~~p-~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~ 286 (409)
T 3hrp_A 208 TRIGQLGSTFSGKI-GAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQ 286 (409)
T ss_dssp EEEEECCTTSCSCC-CBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEET
T ss_pred EEeeeccchhcCCc-EEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeC
Confidence 12200001011111 1246777555555577788999999987764332 22222222 3899993 4 445555
Q ss_pred CCCcEEEEECCCCceeEEEecCC--C-----------CceEEEEEEcCCCCEEEEEE-CCCcEEEEe-CCcceeeeecc-
Q 008820 400 RDGTIRLWSLSDHSLLTVLEEDS--S-----------GAVSSVLSLTAVQHTLVVSH-ESGSIKVWR-NDKFMKSMQTH- 463 (552)
Q Consensus 400 ~dg~i~iwd~~~~~~~~~~~~~~--~-----------~~~~~~~~~s~~~~~l~~g~-~dg~i~iwd-~~~~~~~~~~h- 463 (552)
.++.|+.||.... +..+.... . -....-++++++|+++++-. .++.|+.|| ....+..+.++
T Consensus 287 ~~~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v~~~~g~~ 364 (409)
T 3hrp_A 287 NLSSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYVSTVAGQV 364 (409)
T ss_dssp TTTEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEEEEEEECT
T ss_pred CCCEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEEEEEeCCC
Confidence 6789999997643 22332221 0 01133379999999777777 789999999 44444445444
Q ss_pred --------------cceEEEEEe--cCCEEEEEeCCCeEEEEec
Q 008820 464 --------------KGSVFAVFL--EGKWLFTGGWDKTVSVQEL 491 (552)
Q Consensus 464 --------------~~~v~~v~~--~~~~l~sgs~dg~i~iwd~ 491 (552)
-.....+++ ++.++++-..++.|+.+++
T Consensus 365 ~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 365 DVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp TCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred CCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence 133555655 5666666667778877765
No 458
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.12 E-value=4.3e-07 Score=89.14 Aligned_cols=242 Identities=9% Similarity=0.023 Sum_probs=152.2
Q ss_pred EEEeecCccceEEEEEc--CCEEEEEe----------CCCcEEEEeCCCCeEEEEEeCC-------CCCeEEEEEecCCC
Q 008820 245 FKDLQGHRDCVTGLAVG--GGFLFSSS----------FDKSIHVWSLKDFSHVHTFKGH-------DHKVMAVVYVDEDQ 305 (552)
Q Consensus 245 ~~~l~~H~~~V~~l~~s--~~~l~s~s----------~dg~I~iwd~~~~~~~~~~~~h-------~~~v~~v~~~~~~~ 305 (552)
+..+.....+ .++++ +++++.+. .++.|.+||..+.+.+.++... ......++|+|++.
T Consensus 60 ~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~ 137 (373)
T 2mad_H 60 LGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNA 137 (373)
T ss_pred EEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCC
Confidence 3444443344 88888 88888875 3678999999998888877532 12345889999888
Q ss_pred CEEEEEcC-CCcEEEEeCCCCCCCcc-ccccccCCCceeeeEEEEeeCC-CEEEEeeCCCcEEEEECCCCceeEEec---
Q 008820 306 PLCISGDS-GGGIFVWSFSFPLGHEP-LKKWNEEKDWRYSGIHALTTSG-RYLYTGSGDRTIKAWSLLDGTLSCTMS--- 379 (552)
Q Consensus 306 ~~l~s~~~-dg~i~vwd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~l~sgs~dg~i~iwd~~~~~~~~~~~--- 379 (552)
.++++... ++.|.++| .+.+.... +.. .. ...+.+++ +.+++.+.||.+.++|. +++......
T Consensus 138 ~l~v~n~~~~~~v~viD-~t~~~~~~~i~~---~~------~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~ 206 (373)
T 2mad_H 138 DLLFFQFAAGPAVGLVV-QGGSSDDQLLSS---PT------CYHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGA 206 (373)
T ss_pred EEEEEecCCCCeEEEEE-CCCCEEeEEcCC---Cc------eEEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEeccc
Confidence 66665544 68899999 87644322 211 11 12334444 46677788999999999 887764322
Q ss_pred --CCCCCe-EEEEEe--CCEEEEEeCCCcEEEEECCCCc--eeEEEecCC---------CCceEEEEEEcCCCCEEEEEE
Q 008820 380 --GHKSAV-STLAVC--NGVLYSGSRDGTIRLWSLSDHS--LLTVLEEDS---------SGAVSSVLSLTAVQHTLVVSH 443 (552)
Q Consensus 380 --~h~~~v-~~l~~~--~~~l~s~~~dg~i~iwd~~~~~--~~~~~~~~~---------~~~~~~~~~~s~~~~~l~~g~ 443 (552)
....++ ....+. ++.++..+.++.+.+.|+.++. .+..+.... ... ...+.++++++.++++.
T Consensus 207 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g-~~~~~~s~d~~~lyV~~ 285 (373)
T 2mad_H 207 MLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGG-WQQVAYLKSSDGIYLLT 285 (373)
T ss_pred cccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCc-eEeEEECCCCCEEEEEe
Confidence 112222 223334 3444444478899999997653 222222110 111 12257899999888865
Q ss_pred C----------CCcEEEEeCCc--ceeeeec-ccceEEEEEecCC-EEEEEe-CCCeEEEEecCCCeeeeee
Q 008820 444 E----------SGSIKVWRNDK--FMKSMQT-HKGSVFAVFLEGK-WLFTGG-WDKTVSVQELAGDEFEEDV 500 (552)
Q Consensus 444 ~----------dg~i~iwd~~~--~~~~~~~-h~~~v~~v~~~~~-~l~sgs-~dg~i~iwd~~~~~~~~~~ 500 (552)
. ++.|.++|..+ .+..+.. +...-..+++||+ .++++. .++.|.+||+.+.+.....
T Consensus 286 ~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~~i 357 (373)
T 2mad_H 286 SEQSAWKLHAAAKEVTSVTGLVGQTSSQISLGHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQST 357 (373)
T ss_pred ccCCcccccCCCCeEEEEECCCCEEEEEEECCCCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEEeee
Confidence 4 35799999653 4455543 2223334455898 788777 4899999999998776653
No 459
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=99.11 E-value=8.5e-12 Score=129.91 Aligned_cols=135 Identities=15% Similarity=0.193 Sum_probs=73.3
Q ss_pred hhhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cc
Q 008820 13 VAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QF 89 (552)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf 89 (552)
+.|+. |+++.+..... .....||+.|+|||++ . ...+++++|||||||+||+|++|+ ||
T Consensus 162 ~vKL~DFG~a~~~~~~~~---~~~~~gt~~Y~APE~l------~---------~~~~s~ksDIwSLGviLyeLltG~~Pf 223 (676)
T 3qa8_A 162 IHKIIDLGYAKELDQGEL---CTEFVGTLQYLAPELL------E---------QKKYTVTVDYWSFGTLAFECITGFRPF 223 (676)
T ss_dssp EEEECSCCCCCBTTSCCC---CCCCCSCCTTCSSCSS------C---------CSCCSTTHHHHHHHHHHHHHHSSCSSC
T ss_pred eEEEcccccccccccccc---cccccCCcccCChHHh------c---------cCCCCchhHHHHHHHHHHHHHHCCCCC
Confidence 35566 55655544432 5678999999999998 3 356788999999999999999999 99
Q ss_pred hHHHhh-hhhh-ccccCCCchhhhhhh---hHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcchhh-----HH
Q 008820 90 TKELID-YIRC-VSTKASDDNIACLGM---YMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLLTN-----VW 159 (552)
Q Consensus 90 ~~~~~~-~~~~-~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~~~-----~~ 159 (552)
.+...+ .+.. +... ....+..... ...+.. ....+..........+.+++.+||..+|.+||++.+ ..
T Consensus 224 ~~~~~~~~~~~~i~~~-~~~~~~~~~~l~g~~~~~~-~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F 301 (676)
T 3qa8_A 224 LPNWQPVQWHGKVREK-SNEHIVVYDDLTGAVKFSS-VLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCF 301 (676)
T ss_dssp CSSCHHHHSSTTCC-------CCSCCCCSSSCCCCS-SSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTH
T ss_pred Ccccchhhhhhhhhcc-cchhhhhhhhhcccccccc-ccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHH
Confidence 543111 0000 0000 0000000000 000000 000000001112234889999999999999999875 44
Q ss_pred HHHHhhhc
Q 008820 160 KCIRELII 167 (552)
Q Consensus 160 ~~l~~~~~ 167 (552)
+.+..++.
T Consensus 302 ~~l~~iL~ 309 (676)
T 3qa8_A 302 QALDSILS 309 (676)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHHh
Confidence 55555543
No 460
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.11 E-value=1.1e-07 Score=94.83 Aligned_cols=236 Identities=9% Similarity=0.037 Sum_probs=150.4
Q ss_pred CCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCC--cEEEEECC
Q 008820 293 HKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDR--TIKAWSLL 370 (552)
Q Consensus 293 ~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg--~i~iwd~~ 370 (552)
.....++|.+++. ++++...++.|+.||..++........ . .... .+++++++.++++..++ .|..+|..
T Consensus 131 ~~P~~la~d~~g~-lyv~d~~~~~I~~id~~~g~~~~~~~~---~---~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~ 202 (409)
T 3hrp_A 131 KYMWGIAAVGNNT-VLAYQRDDPRVRLISVDDNKVTTVHPG---F---KGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKA 202 (409)
T ss_dssp CCEEEEEECSTTE-EEEEETTTTEEEEEETTTTEEEEEEET---C---CBCB-CEECTTSSEEEEEBSSTTCEEEEEEGG
T ss_pred CCceEEEEeCCCC-EEEEecCCCcEEEEECCCCEEEEeecc---C---CCCc-eeEecCCCcEEEEecCCCceEEEEEcC
Confidence 3578999988665 777777889999999876433222111 1 1112 57889999888888766 79999987
Q ss_pred CCceeEEe----cCCCCCeEEEEEe--CCEEEEEeCCCcEEEEECCCCceeEEE---ecCCCCce-EEEEEEcCC-CCEE
Q 008820 371 DGTLSCTM----SGHKSAVSTLAVC--NGVLYSGSRDGTIRLWSLSDHSLLTVL---EEDSSGAV-SSVLSLTAV-QHTL 439 (552)
Q Consensus 371 ~~~~~~~~----~~h~~~v~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~---~~~~~~~~-~~~~~~s~~-~~~l 439 (552)
.+.....+ ......+.+++++ ++.|+.+..++.|+.||..++.....- ........ ..-++++|+ +.++
T Consensus 203 ~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~ly 282 (409)
T 3hrp_A 203 SGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFY 282 (409)
T ss_dssp GTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEE
T ss_pred CCceeEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEE
Confidence 66554444 2245667889998 357777888899999999877643220 11111111 113789995 5555
Q ss_pred EEEECCCcEEEEeCCcceeeeeccc---------------ceEEEEEe--cCCEEEEEe-CCCeEEEEecCCCeeeeeec
Q 008820 440 VVSHESGSIKVWRNDKFMKSMQTHK---------------GSVFAVFL--EGKWLFTGG-WDKTVSVQELAGDEFEEDVI 501 (552)
Q Consensus 440 ~~g~~dg~i~iwd~~~~~~~~~~h~---------------~~v~~v~~--~~~~l~sgs-~dg~i~iwd~~~~~~~~~~~ 501 (552)
++-..++.|+.|+.......+.++. .....+++ +|+++++-+ .++.|+.||+.++.......
T Consensus 283 v~d~~~~~I~~~~~~g~~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v~~~~g 362 (409)
T 3hrp_A 283 MSDQNLSSVYKITPDGECEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYVSTVAG 362 (409)
T ss_dssp EEETTTTEEEEECTTCCEEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEEEEEEE
T ss_pred EEeCCCCEEEEEecCCCEEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEEEEEeC
Confidence 5556688999999665444444432 23455655 788777777 78999999987776543322
Q ss_pred cCCCc---------ccCcceEEEEEeC-CeEEE-EeCCCeEEEEEe
Q 008820 502 PTGAI---------PCGSVITALLYWQ-GKLFV-GCADRTVKIALC 536 (552)
Q Consensus 502 ~~~~~---------~~~~~v~~l~~~~-~~l~s-~s~Dg~v~iw~~ 536 (552)
..... ..-.....+++++ +.|++ -..++.|+.+++
T Consensus 363 ~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 363 QVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp CTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred CCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence 21000 0013477888885 55554 445677877765
No 461
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.08 E-value=1.4e-11 Score=131.61 Aligned_cols=104 Identities=16% Similarity=0.113 Sum_probs=69.8
Q ss_pred hhhcc--cccccccccchhhhhhhccccccccchHHHHHHhhccCceeecccccccccccccccchhhhhhhhhhCC-Cc
Q 008820 13 VAKVG--CVGSRICDKEVGLFLSDFLESNVFFSPEVLYELFKKEGIWVECEESEFSVGYGSDVWPVACILLSLLIGE-QF 89 (552)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~~~~~~sDv~SlG~~l~~lltg~-pf 89 (552)
..|+. |+++.+... +...||+.|||||++. +..+.++|||||||+||+|++|. ||
T Consensus 219 ~~kl~DFG~a~~~~~~------~~~~gt~~y~aPE~~~----------------~~~~~~sDi~slG~~l~~l~~g~~~~ 276 (681)
T 2pzi_A 219 QLKLIDLGAVSRINSF------GYLYGTPGFQAPEIVR----------------TGPTVATDIYTVGRTLAALTLDLPTR 276 (681)
T ss_dssp CEEECCCTTCEETTCC------SCCCCCTTTSCTTHHH----------------HCSCHHHHHHHHHHHHHHHHSCCCEE
T ss_pred cEEEEecccchhcccC------CccCCCccccCHHHHc----------------CCCCCceehhhhHHHHHHHHhCCCCC
Confidence 34666 556555433 5678999999999982 22368999999999999999999 98
Q ss_pred hHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhcccCCCCCcch-hhHHHHHHhh
Q 008820 90 TKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNFDPGCRPLL-TNVWKCIREL 165 (552)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~~R~~~-~~~~~~l~~~ 165 (552)
.......+ + ... . ....+ ..+.+++.+||+.+|.+||+. .++.+.+..+
T Consensus 277 ~~~~~~~~--------~------~~~-~----~~~~~--------~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~ 326 (681)
T 2pzi_A 277 NGRYVDGL--------P------EDD-P----VLKTY--------DSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGV 326 (681)
T ss_dssp TTEECSSC--------C------TTC-H----HHHHC--------HHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred cccccccc--------c------ccc-c----ccccC--------HHHHHHHhhhccCChhhCCCHHHHHHHHHHHH
Confidence 76332210 0 000 0 00111 238899999999999999974 4555554443
No 462
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.07 E-value=1.1e-07 Score=92.32 Aligned_cols=251 Identities=14% Similarity=0.081 Sum_probs=158.5
Q ss_pred CeEEEEEeecCccceEEEEEc--CCEEEEEe----------CCCcEEEEeCCCCeEEEEEeCCC-------CCeEEEEEe
Q 008820 241 GNVKFKDLQGHRDCVTGLAVG--GGFLFSSS----------FDKSIHVWSLKDFSHVHTFKGHD-------HKVMAVVYV 301 (552)
Q Consensus 241 ~~~~~~~l~~H~~~V~~l~~s--~~~l~s~s----------~dg~I~iwd~~~~~~~~~~~~h~-------~~v~~v~~~ 301 (552)
....+.++..-..+ . ++++ +++++.++ .++.|.+||..+.+.+.++.... .....++|+
T Consensus 68 t~~v~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~s 145 (386)
T 3sjl_D 68 AGRVIGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLT 145 (386)
T ss_dssp TTEEEEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEEC
T ss_pred CCeEEEEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEc
Confidence 33344555544445 4 8888 88777765 36789999999999998885321 245678999
Q ss_pred cCCCCEEEEEc-CCCcEEEEeCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCC-CceeEEec
Q 008820 302 DEDQPLCISGD-SGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLD-GTLSCTMS 379 (552)
Q Consensus 302 ~~~~~~l~s~~-~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~-~~~~~~~~ 379 (552)
|++..++++.. .++.|.++|+.+.+....+.... ....+....+.+++.+.||.+.+.++.+ ++......
T Consensus 146 pDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g--------~~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~ 217 (386)
T 3sjl_D 146 PDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPD--------CYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHT 217 (386)
T ss_dssp TTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCS--------EEEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEEC
T ss_pred CCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCC--------cceeecCCCceeEEECCCCCEEEEECCCCCeEEEeec
Confidence 98887666654 37899999999765444332211 0112233445777888899999999876 55533221
Q ss_pred CC----CCCeE-EEEEe--CCEEEEEeCCCcEEEEECCCCc--eeEEEecC---------CCCceEEEEEEcCCCCEEEE
Q 008820 380 GH----KSAVS-TLAVC--NGVLYSGSRDGTIRLWSLSDHS--LLTVLEED---------SSGAVSSVLSLTAVQHTLVV 441 (552)
Q Consensus 380 ~h----~~~v~-~l~~~--~~~l~s~~~dg~i~iwd~~~~~--~~~~~~~~---------~~~~~~~~~~~s~~~~~l~~ 441 (552)
.+ ..++. ...|. ++.++..+.+|+|++.|+.+.. ....+... ..+... .++++++++.+++
T Consensus 218 ~~~~~~~~~~~~~~~~~~~dG~~~~vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q-~~a~~~~~~~lyV 296 (386)
T 3sjl_D 218 EVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQ-QVAYHRALDRIYL 296 (386)
T ss_dssp CCCSCTTSCBCSCCEEETTTTEEEEEBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSS-CEEEETTTTEEEE
T ss_pred ceeccccccccccceeEcCCCcEEEEeCCCEEEEEECCCCcceeecceeccccccccccccCCCcc-eeeECCCCCeEEE
Confidence 11 12222 24564 5666667779999999997664 33333200 011111 2577899998888
Q ss_pred EEC----------CCcEEEEeCCc--ceeeeecccceEEEE--EecCC-EEEEEe-CCCeEEEEecCCCeeeeeeccC
Q 008820 442 SHE----------SGSIKVWRNDK--FMKSMQTHKGSVFAV--FLEGK-WLFTGG-WDKTVSVQELAGDEFEEDVIPT 503 (552)
Q Consensus 442 g~~----------dg~i~iwd~~~--~~~~~~~h~~~v~~v--~~~~~-~l~sgs-~dg~i~iwd~~~~~~~~~~~~~ 503 (552)
... .+.|.++|..+ .+..+..- ..+.++ ++|++ +|++.. .++.|.++|..+++........
T Consensus 297 ~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg-~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~~~i~~~ 373 (386)
T 3sjl_D 297 LVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMG-HEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQL 373 (386)
T ss_dssp EEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEE-EEECEEEECSSSSCEEEEEETTTTEEEEEETTTCCEEEEECCC
T ss_pred EeccccccccCCCCCEEEEEECCCCeEEEEEECC-CCcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEEEEecCC
Confidence 753 24788999653 44444322 234444 45886 666654 5899999999998877666554
No 463
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.06 E-value=3e-09 Score=102.84 Aligned_cols=269 Identities=13% Similarity=0.122 Sum_probs=166.5
Q ss_pred EEEEeecCccceEEEEEc-CCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeC
Q 008820 244 KFKDLQGHRDCVTGLAVG-GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSF 322 (552)
Q Consensus 244 ~~~~l~~H~~~V~~l~~s-~~~l~s~s~dg~I~iwd~~~~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~ 322 (552)
.+|.+..+...+.++... +..++.++.+ |..+|. +++.+..+...........+. +..+..++.++.+..+|.
T Consensus 51 ~~~~~~~~~~~~~~~~~~~~g~l~v~t~~--l~~~d~-~g~~~~~~~~~~~~~~~~~~~---~~~l~v~t~~~~l~~~d~ 124 (330)
T 3hxj_A 51 VKWFFKSGEIIECRPSIGKDGTIYFGSDK--VYAINP-DGTEKWRFDTKKAIVSDFTIF---EDILYVTSMDGHLYAINT 124 (330)
T ss_dssp EEESSCGGGEEEECCEETTTTEECCSSCE--EEEECC-CGGGGGGSCC-----CCEEEE---TTEEEEECTTSEEEEECT
T ss_pred EEEEEecCCCcccceEEecCCcEEEecCc--EEEECC-CCcEEEEEECCCCcccCceEE---CCEEEEEecCCEEEEEcC
Confidence 356666566667778886 6677777666 888885 555444333222222233333 235677888899999997
Q ss_pred CCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe-CCEEEEEeCC
Q 008820 323 SFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC-NGVLYSGSRD 401 (552)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~-~~~l~s~~~d 401 (552)
. +........ ... ... ......++ .++.++.++.|..+|.. ++....+......+.++... ++.++.++
T Consensus 125 ~-g~~~~~~~~---~~~-~~~-~~~~~~~g-~l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d~~g~l~v~t-- 194 (330)
T 3hxj_A 125 D-GTEKWRFKT---KKA-IYA-TPIVSEDG-TIYVGSNDNYLYAINPD-GTEKWRFKTNDAITSAASIGKDGTIYFGS-- 194 (330)
T ss_dssp T-SCEEEEEEC---SSC-CCS-CCEECTTS-CEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTCCEEEES--
T ss_pred C-CCEEEEEcC---CCc-eee-eeEEcCCC-EEEEEcCCCEEEEECCC-CCEeEEEecCCCceeeeEEcCCCEEEEEe--
Confidence 7 432222111 111 011 11233344 46778888999999998 88877776666667778776 66677776
Q ss_pred CcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEECCCcEEEEeCC-cceeeeecccceEEEEEec-CCEEEE
Q 008820 402 GTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRND-KFMKSMQTHKGSVFAVFLE-GKWLFT 479 (552)
Q Consensus 402 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~-~~~~~~~~h~~~v~~v~~~-~~~l~s 479 (552)
+.|..+| .+++......... ..+.+ +...+++. +.+++.++.+..+|.. +....+......+.++..+ +..|..
T Consensus 195 ~~l~~~d-~~g~~~~~~~~~~-~~~~~-~~~~~~g~-l~v~t~~~gl~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~v 270 (330)
T 3hxj_A 195 DKVYAIN-PDGTEKWNFYAGY-WTVTR-PAISEDGT-IYVTSLDGHLYAINPDGTEKWRFKTGKRIESSPVIGNTDTIYF 270 (330)
T ss_dssp SSEEEEC-TTSCEEEEECCSS-CCCSC-CEECTTSC-EEEEETTTEEEEECTTSCEEEEEECSSCCCSCCEECTTSCEEE
T ss_pred CEEEEEC-CCCcEEEEEccCC-cceec-eEECCCCe-EEEEcCCCeEEEECCCCCEeEEeeCCCCccccceEcCCCeEEE
Confidence 8899999 7777776665432 22333 46666665 5667778889888853 3333443333323333343 667888
Q ss_pred EeCCCeEEEEecCCCeeeeeeccCCCcccCcceEEEEE-eCCeEEEEeCCCeEEEEEecC
Q 008820 480 GGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLY-WQGKLFVGCADRTVKIALCNR 538 (552)
Q Consensus 480 gs~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~-~~~~l~s~s~Dg~v~iw~~~~ 538 (552)
++.+|.|..+|. +++........ ...+.++.. .++.|+.++.+|.+++...+.
T Consensus 271 ~t~~ggl~~~d~-~g~~~~~~~~~-----~~~~~~~~~d~~g~l~~gt~~G~~~~~~~~~ 324 (330)
T 3hxj_A 271 GSYDGHLYAINP-DGTEKWNFETG-----SWIIATPVIDENGTIYFGTRNGKFYALFNLE 324 (330)
T ss_dssp ECTTCEEEEECT-TSCEEEEEECS-----SCCCSCCEECTTCCEEEECTTSCEEEEEC--
T ss_pred ecCCCCEEEECC-CCcEEEEEEcC-----CccccceEEcCCCEEEEEcCCCeEEEEeccc
Confidence 888999999996 45444433321 334566666 367899999999999988764
No 464
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.05 E-value=5.2e-11 Score=117.30 Aligned_cols=183 Identities=14% Similarity=0.082 Sum_probs=107.6
Q ss_pred CCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe-CC-EEEEEeCCCcEEEEECCCCceeEEEecCCCCceEE
Q 008820 351 SGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC-NG-VLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSS 428 (552)
Q Consensus 351 ~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~-~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~ 428 (552)
++..+++++.||.|+.||..+|+.++++.. +.+.+..+. ++ .+++++.|+.|+.||..+++.+..+..+.......
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~ 85 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQA 85 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTT
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCcccccc
Confidence 577899999999999999999999998876 444443333 44 67777899999999999998877765431111110
Q ss_pred EEEEcCCCCEEEEEECCCcEEEEeCC--cceeeeecccceEEEEEecCCEEEEEeCCCeEEEEecCCCeeeeeeccCCCc
Q 008820 429 VLSLTAVQHTLVVSHESGSIKVWRND--KFMKSMQTHKGSVFAVFLEGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAI 506 (552)
Q Consensus 429 ~~~~s~~~~~l~~g~~dg~i~iwd~~--~~~~~~~~h~~~v~~v~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~ 506 (552)
...+. ++..+++|+.|+.++.||.. +.+..+..+. ....++++..+++++.|+.|+.||..+++.........
T Consensus 86 sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~--~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~-- 160 (369)
T 2hz6_A 86 SPCRS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF--ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNATYFD-- 160 (369)
T ss_dssp CSCC------CCCCEEEEEEEEECCC------------------------EEEEEEEEEEECCCSSSSSCCCEEEEEE--
T ss_pred CceEe-cCCEEEEEeCCCEEEEEECCCCcEEEEecCCC--cccccccCCEEEEEecCCEEEEEECCCCCEEEeEeccc--
Confidence 00111 34577888889999999965 4444444433 12334578899999999999999999887665543211
Q ss_pred ccCcceEEEEEeC-----CeEEEEeCCCeEEEEEecCCcceeEEE
Q 008820 507 PCGSVITALLYWQ-----GKLFVGCADRTVKIALCNRQIPEIFSL 546 (552)
Q Consensus 507 ~~~~~v~~l~~~~-----~~l~s~s~Dg~v~iw~~~~~~~~~~~~ 546 (552)
....++.+ +.+++++.||.|+.||.. ++..+.++
T Consensus 161 -----~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~-tG~~~W~~ 199 (369)
T 2hz6_A 161 -----YAASLPEDDVDYKMSHFVSNGDGLVVTVDSE-SGDVLWIQ 199 (369)
T ss_dssp -----ECCBCCCCCTTCCCCEEEEETSCEEEEECTT-TCCEEEEE
T ss_pred -----ccCccccCCccccceEEEECCCCEEEEEECC-CCcEEEEe
Confidence 11222233 668889999999999987 45555544
No 465
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.04 E-value=3.6e-09 Score=103.26 Aligned_cols=170 Identities=12% Similarity=0.098 Sum_probs=119.0
Q ss_pred ceEEEEEc--CCEEEEEeCCCcEEEEeCCCCe-----------EEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEE
Q 008820 254 CVTGLAVG--GGFLFSSSFDKSIHVWSLKDFS-----------HVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVW 320 (552)
Q Consensus 254 ~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~~-----------~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vw 320 (552)
.++.++++ ..++++|+.|+ +++|++++.+ ..... .+.. |+.++| ++.+|+++ .++.|++|
T Consensus 39 ~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~~-~lp~-V~~l~f---d~~~L~v~-~~~~l~v~ 111 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEK-EIPD-VIFVCF---HGDQVLVS-TRNALYSL 111 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEE-ECTT-EEEEEE---ETTEEEEE-ESSEEEEE
T ss_pred cccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccccccccceEEe-eCCC-eeEEEE---CCCEEEEE-cCCcEEEE
Confidence 58888888 88899999884 6679865332 11223 3556 999999 34566777 88999999
Q ss_pred eCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEeCCEEEEEeC
Q 008820 321 SFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVCNGVLYSGSR 400 (552)
Q Consensus 321 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~~~ 400 (552)
|+.+.........+.. .+..+.+....+++++.||.|.+||+.+++... +...|+|++|+++-++.|..
T Consensus 112 dv~sl~~~~~~~~~~~-------~v~~i~~~~p~~av~~~dG~L~v~dl~~~~~~~----~~~~Vs~v~WSpkG~~vg~~ 180 (388)
T 1xip_A 112 DLEELSEFRTVTSFEK-------PVFQLKNVNNTLVILNSVNDLSALDLRTKSTKQ----LAQNVTSFDVTNSQLAVLLK 180 (388)
T ss_dssp ESSSTTCEEEEEECSS-------CEEEEEECSSEEEEEETTSEEEEEETTTCCEEE----EEESEEEEEECSSEEEEEET
T ss_pred EchhhhccCccceeec-------ceeeEEecCCCEEEEECCCCEEEEEccCCcccc----ccCCceEEEEcCCceEEEEc
Confidence 9987654333322221 122334444348999999999999999887654 34579999999544888999
Q ss_pred CCcEEEEECCCCce--eEEEec--------CCCCceEEEEEEcCCCCEEEEE
Q 008820 401 DGTIRLWSLSDHSL--LTVLEE--------DSSGAVSSVLSLTAVQHTLVVS 442 (552)
Q Consensus 401 dg~i~iwd~~~~~~--~~~~~~--------~~~~~~~~~~~~s~~~~~l~~g 442 (552)
||++++|+...++. ..++.. .+...+.+ +.|.+++.++++=
T Consensus 181 dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~s-I~wl~~~~flv~y 231 (388)
T 1xip_A 181 DRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLS-VTILSPQDFLAVF 231 (388)
T ss_dssp TSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEE-EEESSSSEEEEEE
T ss_pred CCcEEEEcCCCccccccceecCCcccccccCCCeeEEE-EEEecCCeEEEEE
Confidence 99999999987775 555621 12344444 6888888888763
No 466
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=99.04 E-value=6.5e-08 Score=102.73 Aligned_cols=280 Identities=12% Similarity=0.074 Sum_probs=174.2
Q ss_pred EcCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCC----------e-EEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCC
Q 008820 260 VGGGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHK----------V-MAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGH 328 (552)
Q Consensus 260 ~s~~~l~s~s~dg~I~iwd~~~~~~~~~~~~h~~~----------v-~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~ 328 (552)
..+..++.++.++.|..+|..+|+.+.++...... + ..+++. + ..++.++.|+.|..+|..+++..
T Consensus 64 v~~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~v~v~~~dg~l~alD~~tG~~~ 140 (668)
T 1kv9_A 64 FHDGVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALW--G-DKVYVGTLDGRLIALDAKTGKAI 140 (668)
T ss_dssp EETTEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEE--B-TEEEEECTTSEEEEEETTTCCEE
T ss_pred EECCEEEEECCCCeEEEEECCCChhceEECCCCCccccccccccCCccceEEE--C-CEEEEEcCCCEEEEEECCCCCEe
Confidence 34778888888999999999999999988643221 0 122332 2 25677888999999999988765
Q ss_pred ccccccccCCCceeeeEEEEeeCCCEEEEeeC------CCcEEEEECCCCceeEEecCCC--------------------
Q 008820 329 EPLKKWNEEKDWRYSGIHALTTSGRYLYTGSG------DRTIKAWSLLDGTLSCTMSGHK-------------------- 382 (552)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~------dg~i~iwd~~~~~~~~~~~~h~-------------------- 382 (552)
................ .....+..++++.. +|.|+.+|.++|+.+..+....
T Consensus 141 W~~~~~~~~~~~~~~~--~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~ 218 (668)
T 1kv9_A 141 WSQQTTDPAKPYSITG--APRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQ 218 (668)
T ss_dssp EEEECSCTTSSCBCCS--CCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCC
T ss_pred eeeccCCCCCcceecC--CCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCC
Confidence 5443321110000000 00012345555543 5899999999999998875210
Q ss_pred -----------CCeEEEEEe--CCEEEEEeCCC-------------------cEEEEECCCCceeEEEecCCCC------
Q 008820 383 -----------SAVSTLAVC--NGVLYSGSRDG-------------------TIRLWSLSDHSLLTVLEEDSSG------ 424 (552)
Q Consensus 383 -----------~~v~~l~~~--~~~l~s~~~dg-------------------~i~iwd~~~~~~~~~~~~~~~~------ 424 (552)
.....++++ .+.++.++.++ .|..+|.++|+.+..+...+..
T Consensus 219 g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~ 298 (668)
T 1kv9_A 219 GDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTA 298 (668)
T ss_dssp SSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCC
T ss_pred ccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccC
Confidence 011235666 45888887766 3999999999999888754211
Q ss_pred -ceEEEEEEcCCCC---EEEEEECCCcEEEEeCC--cceeeeeccc------------ceE-------------------
Q 008820 425 -AVSSVLSLTAVQH---TLVVSHESGSIKVWRND--KFMKSMQTHK------------GSV------------------- 467 (552)
Q Consensus 425 -~~~~~~~~s~~~~---~l~~g~~dg~i~iwd~~--~~~~~~~~h~------------~~v------------------- 467 (552)
.......+..+|+ .++.++.+|.++++|.. +.+....... .++
T Consensus 299 ~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~ 378 (668)
T 1kv9_A 299 TQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPF 378 (668)
T ss_dssp CSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTT
T ss_pred CCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEeccccccccccccccccccCCccccccccccCCeeEECCCCc
Confidence 1111123334665 68889999999999953 3332211100 000
Q ss_pred -------EEEEecCCEEEEE------------------------------------eCCCeEEEEecCCCeeeeeeccCC
Q 008820 468 -------FAVFLEGKWLFTG------------------------------------GWDKTVSVQELAGDEFEEDVIPTG 504 (552)
Q Consensus 468 -------~~v~~~~~~l~sg------------------------------------s~dg~i~iwd~~~~~~~~~~~~~~ 504 (552)
.+++++...++.. ..+|.|+.||+.+++.........
T Consensus 379 G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~~~ 458 (668)
T 1kv9_A 379 GAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPYPT 458 (668)
T ss_dssp CSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEESS
T ss_pred cccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCCcEEEEccCCC
Confidence 2333333443321 134889999999998877655432
Q ss_pred CcccCcceEEEEEeCCeEEEEeCCCeEEEEEecCCcceeEEEecc
Q 008820 505 AIPCGSVITALLYWQGKLFVGCADRTVKIALCNRQIPEIFSLLLH 549 (552)
Q Consensus 505 ~~~~~~~v~~l~~~~~~l~s~s~Dg~v~iw~~~~~~~~~~~~~gh 549 (552)
.. .-..+...++.+++++.||.++.||.. +++.+.++...
T Consensus 459 ~~----~~~~~~t~gg~vf~g~~dg~l~a~d~~-tG~~l~~~~~~ 498 (668)
T 1kv9_A 459 HW----NGGTLSTAGNLVFQGTAAGQMHAYSAD-KGEALWQFEAQ 498 (668)
T ss_dssp SC----CCCEEEETTTEEEEECTTSEEEEEETT-TCCEEEEEECS
T ss_pred CC----cCceeEeCCCEEEEECCcccchhhhhh-cChhheEecCC
Confidence 11 112344457889999999999999987 67777776543
No 467
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.00 E-value=1.9e-06 Score=81.54 Aligned_cols=234 Identities=13% Similarity=0.097 Sum_probs=142.7
Q ss_pred EeecCccceEEEEEc--CCEEEEEeCCCcEEEEeCCCCeEEE-EEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCC
Q 008820 247 DLQGHRDCVTGLAVG--GGFLFSSSFDKSIHVWSLKDFSHVH-TFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFS 323 (552)
Q Consensus 247 ~l~~H~~~V~~l~~s--~~~l~s~s~dg~I~iwd~~~~~~~~-~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~ 323 (552)
.+..+...+.+++++ +.+.++...++.|..||.. ++... .+......+.++++.+++. ++++...++.|..+|..
T Consensus 56 ~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~~~~ 133 (300)
T 2qc5_A 56 EVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGFTEYPLPQPDSGPYGITEGLNGD-IWFTQLNGDRIGKLTAD 133 (300)
T ss_dssp ECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECSTTC-EEEEETTTTEEEEECTT
T ss_pred ECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CCeEEecCCCCCCCCccceECCCCC-EEEEccCCCeEEEECCC
Confidence 344445678899998 6666666667889999987 55432 2222446789999987654 66666668899999876
Q ss_pred CCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCceeEE-ecCCCCCeEEEEEe-CCEEEEEe-C
Q 008820 324 FPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCT-MSGHKSAVSTLAVC-NGVLYSGS-R 400 (552)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~-~~~h~~~v~~l~~~-~~~l~s~~-~ 400 (552)
+... ... ... .. ......++.++++..++...++.|..+|. +++.... ...+...+.+++++ ++.++.+. .
T Consensus 134 -g~~~-~~~-~~~-~~-~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~ 207 (300)
T 2qc5_A 134 -GTIY-EYD-LPN-KG-SYPAFITLGSDNALWFTENQNNSIGRITN-TGKLEEYPLPTNAAAPVGITSGNDGALWFVEIM 207 (300)
T ss_dssp -SCEE-EEE-CSS-TT-CCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETT
T ss_pred -CCEE-Ecc-CCC-CC-CCceeEEECCCCCEEEEecCCCeEEEECC-CCcEEEeeCCCCCCCcceEEECCCCCEEEEccC
Confidence 3211 111 111 11 11223456677886666666788999998 5554432 23345568899998 55454444 5
Q ss_pred CCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEECCCcEEEEeCCcceeeee--cccceEEEEEe--cCCE
Q 008820 401 DGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDKFMKSMQ--THKGSVFAVFL--EGKW 476 (552)
Q Consensus 401 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~~~~~~~~--~h~~~v~~v~~--~~~~ 476 (552)
.+.|..||. +++.............. .++++++|++.++...++.|..||.......+. .....+.++.. +|+.
T Consensus 208 ~~~i~~~~~-~g~~~~~~~~~~~~~~~-~i~~d~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~~~~g~l 285 (300)
T 2qc5_A 208 GNKIGRITT-TGEISEYDIPTPNARPH-AITAGKNSEIWFTEWGANQIGRITNDNTIQEYQLQTENAEPHGITFGKDGSV 285 (300)
T ss_dssp TTEEEEECT-TCCEEEEECSSTTCCEE-EEEECSTTCEEEEETTTTEEEEECTTSCEEEEECCSTTCCCCCEEECTTSCE
T ss_pred CCEEEEEcC-CCcEEEEECCCCCCCce-EEEECCCCCEEEeccCCCeEEEECCCCcEEEEECCccCCccceeEeCCCCCE
Confidence 678999998 55544322211122333 368899998666665678999999754333332 22344555555 5664
Q ss_pred EEEEeCCCeEEEEecC
Q 008820 477 LFTGGWDKTVSVQELA 492 (552)
Q Consensus 477 l~sgs~dg~i~iwd~~ 492 (552)
.++.. . .|..+|.+
T Consensus 286 ~v~~~-~-~i~~~~p~ 299 (300)
T 2qc5_A 286 WFALK-C-KIGKLNLN 299 (300)
T ss_dssp EEECS-S-EEEEEEEC
T ss_pred EEEcc-C-ceEEeCCC
Confidence 44443 4 67666653
No 468
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.98 E-value=6.3e-07 Score=95.13 Aligned_cols=268 Identities=12% Similarity=0.073 Sum_probs=164.5
Q ss_pred eEEEeeCCCeEEEEEeecCccc----------e-EEEEEcCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCC----CCeEE
Q 008820 233 DLVNGLSKGNVKFKDLQGHRDC----------V-TGLAVGGGFLFSSSFDKSIHVWSLKDFSHVHTFKGHD----HKVMA 297 (552)
Q Consensus 233 ~~~~~~~~~~~~~~~l~~H~~~----------V-~~l~~s~~~l~s~s~dg~I~iwd~~~~~~~~~~~~h~----~~v~~ 297 (552)
.+..........+|++...... + ..+++.+..++.++.|+.|..+|..+|+.+..+.... ..+.+
T Consensus 77 ~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~ 156 (668)
T 1kv9_A 77 RVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTLDGRLIALDAKTGKAIWSQQTTDPAKPYSITG 156 (668)
T ss_dssp EEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECTTSEEEEEETTTCCEEEEEECSCTTSSCBCCS
T ss_pred eEEEEECCCChhceEECCCCCccccccccccCCccceEEECCEEEEEcCCCEEEEEECCCCCEeeeeccCCCCCcceecC
Confidence 3333333445567877543321 1 2345567888899999999999999999998886531 11111
Q ss_pred -EEEecCCCCEEEEEcC------CCcEEEEeCCCCCCCccccccccCCC--------------------------ceeee
Q 008820 298 -VVYVDEDQPLCISGDS------GGGIFVWSFSFPLGHEPLKKWNEEKD--------------------------WRYSG 344 (552)
Q Consensus 298 -v~~~~~~~~~l~s~~~------dg~i~vwd~~~~~~~~~~~~~~~~~~--------------------------~~~~~ 344 (552)
... . ++ .++.++. +|.|..+|..+++............. ...-.
T Consensus 157 ~P~v-~-~~-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~ 233 (668)
T 1kv9_A 157 APRV-V-KG-KVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWD 233 (668)
T ss_dssp CCEE-E-TT-EEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCS
T ss_pred CCEE-E-CC-EEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCccceeeeCCCCcccc
Confidence 111 1 33 3344432 58999999988776544332110000 00001
Q ss_pred EEEEeeCCCEEEEeeCCC-------------------cEEEEECCCCceeEEecC--CC-------CCeEEEEEe-CC--
Q 008820 345 IHALTTSGRYLYTGSGDR-------------------TIKAWSLLDGTLSCTMSG--HK-------SAVSTLAVC-NG-- 393 (552)
Q Consensus 345 ~~~~~~~~~~l~sgs~dg-------------------~i~iwd~~~~~~~~~~~~--h~-------~~v~~l~~~-~~-- 393 (552)
..++.++.+.++.++.++ .|..+|.++|+.+..++. |. .+.....+. ++
T Consensus 234 ~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~ 313 (668)
T 1kv9_A 234 SMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKP 313 (668)
T ss_dssp CEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEE
T ss_pred ceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcE
Confidence 235666777888887766 399999999999988864 22 222222222 33
Q ss_pred --EEEEEeCCCcEEEEECCCCceeEEEecCCCCc----------------------------------eEEEEEEcCCCC
Q 008820 394 --VLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGA----------------------------------VSSVLSLTAVQH 437 (552)
Q Consensus 394 --~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~----------------------------------~~~~~~~s~~~~ 437 (552)
.++.++.+|.++++|..+|+.+.......... ....++++|+..
T Consensus 314 ~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g 393 (668)
T 1kv9_A 314 RKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTG 393 (668)
T ss_dssp EEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTT
T ss_pred EEEEEEECCCCEEEEEECCCCCEeccccccccccccccccccCCccccccccccCCeeEECCCCccccCCCcceECCCCC
Confidence 58899999999999999999885554321000 000146777766
Q ss_pred EEEEEE------------------------------------CCCcEEEEeCCcc--eeeeecccceE-EEEEecCCEEE
Q 008820 438 TLVVSH------------------------------------ESGSIKVWRNDKF--MKSMQTHKGSV-FAVFLEGKWLF 478 (552)
Q Consensus 438 ~l~~g~------------------------------------~dg~i~iwd~~~~--~~~~~~h~~~v-~~v~~~~~~l~ 478 (552)
++++.. .+|.|..||..+. +.....+.... ..+...+.+++
T Consensus 394 ~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~~~~~t~gg~vf 473 (668)
T 1kv9_A 394 LVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPYPTHWNGGTLSTAGNLVF 473 (668)
T ss_dssp EEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEE
T ss_pred EEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCCcEEEEccCCCCCcCceeEeCCCEEE
Confidence 666522 2377888996543 33333222211 23445788999
Q ss_pred EEeCCCeEEEEecCCCeeeeeeccC
Q 008820 479 TGGWDKTVSVQELAGDEFEEDVIPT 503 (552)
Q Consensus 479 sgs~dg~i~iwd~~~~~~~~~~~~~ 503 (552)
.++.||.++.||.++++....+...
T Consensus 474 ~g~~dg~l~a~d~~tG~~l~~~~~~ 498 (668)
T 1kv9_A 474 QGTAAGQMHAYSADKGEALWQFEAQ 498 (668)
T ss_dssp EECTTSEEEEEETTTCCEEEEEECS
T ss_pred EECCcccchhhhhhcChhheEecCC
Confidence 9999999999999999887766554
No 469
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=98.97 E-value=2.8e-08 Score=96.98 Aligned_cols=168 Identities=9% Similarity=-0.030 Sum_probs=116.4
Q ss_pred eeEEEEeeCCCEEEEeeCCCcEEEEECCCCc-----------eeEEecCCCCCeEEEEEeCCEEEEEeCCCcEEEEECCC
Q 008820 343 SGIHALTTSGRYLYTGSGDRTIKAWSLLDGT-----------LSCTMSGHKSAVSTLAVCNGVLYSGSRDGTIRLWSLSD 411 (552)
Q Consensus 343 ~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~-----------~~~~~~~h~~~v~~l~~~~~~l~s~~~dg~i~iwd~~~ 411 (552)
....++++....+++|+.++ +.+|++...+ ..... .+.. |+.++|+++.|+++ .++.|++||+++
T Consensus 40 ~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~~-~lp~-V~~l~fd~~~L~v~-~~~~l~v~dv~s 115 (388)
T 1xip_A 40 LQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEK-EIPD-VIFVCFHGDQVLVS-TRNALYSLDLEE 115 (388)
T ss_dssp CBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEE-ECTT-EEEEEEETTEEEEE-ESSEEEEEESSS
T ss_pred ccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccccccccceEEe-eCCC-eeEEEECCCEEEEE-cCCcEEEEEchh
Confidence 34568888889999999985 6669875332 22223 3566 99999955578777 889999999988
Q ss_pred CceeEEEecCCCCceEEEEEEcCCCCEEEEEECCCcEEEEeCCcceeeeecccceEEEEEecCCEEEEEeCCCeEEEEec
Q 008820 412 HSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDKFMKSMQTHKGSVFAVFLEGKWLFTGGWDKTVSVQEL 491 (552)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~~~~~~~~~h~~~v~~v~~~~~~l~sgs~dg~i~iwd~ 491 (552)
.........+. ..+..+....| .+++++.||.|.+||+.+.... .+...|.+++|..+-++.|..||++++|+.
T Consensus 116 l~~~~~~~~~~-~~v~~i~~~~p---~~av~~~dG~L~v~dl~~~~~~--~~~~~Vs~v~WSpkG~~vg~~dg~i~~~~~ 189 (388)
T 1xip_A 116 LSEFRTVTSFE-KPVFQLKNVNN---TLVILNSVNDLSALDLRTKSTK--QLAQNVTSFDVTNSQLAVLLKDRSFQSFAW 189 (388)
T ss_dssp TTCEEEEEECS-SCEEEEEECSS---EEEEEETTSEEEEEETTTCCEE--EEEESEEEEEECSSEEEEEETTSCEEEEEE
T ss_pred hhccCccceee-cceeeEEecCC---CEEEEECCCCEEEEEccCCccc--cccCCceEEEEcCCceEEEEcCCcEEEEcC
Confidence 76555554443 33444333333 3888999999999998743322 256789999995555889999999999999
Q ss_pred CCCee--eeeeccCCC----cccCcceEEEEEeCC
Q 008820 492 AGDEF--EEDVIPTGA----IPCGSVITALLYWQG 520 (552)
Q Consensus 492 ~~~~~--~~~~~~~~~----~~~~~~v~~l~~~~~ 520 (552)
.+... ...+..... ..+...|.++.|.++
T Consensus 190 ~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~ 224 (388)
T 1xip_A 190 RNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSP 224 (388)
T ss_dssp ETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSS
T ss_pred CCccccccceecCCcccccccCCCeeEEEEEEecC
Confidence 87764 333321111 113677999999954
No 470
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.95 E-value=1.1e-06 Score=83.44 Aligned_cols=223 Identities=10% Similarity=0.095 Sum_probs=136.3
Q ss_pred CccceEEEEEc---CCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCC
Q 008820 251 HRDCVTGLAVG---GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLG 327 (552)
Q Consensus 251 H~~~V~~l~~s---~~~l~s~s~dg~I~iwd~~~~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~ 327 (552)
+..--.+..|+ +.++++...++.|..||..+++. ..+. ....+.++++.+++. ++++. ++.|.+||.+++..
T Consensus 11 ~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~-~~~~-~~~~~~~i~~~~dG~-l~v~~--~~~l~~~d~~~g~~ 85 (297)
T 3g4e_A 11 NCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQV-QRVT-MDAPVSSVALRQSGG-YVATI--GTKFCALNWKEQSA 85 (297)
T ss_dssp CCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCE-EEEE-CSSCEEEEEEBTTSS-EEEEE--TTEEEEEETTTTEE
T ss_pred CCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcE-EEEe-CCCceEEEEECCCCC-EEEEE--CCeEEEEECCCCcE
Confidence 33455677887 45677777789999999988765 3333 457899999999877 44443 57899999876532
Q ss_pred CccccccccCCCceeeeEEEEeeCCCEEEEeeCC---------CcEEEEECCC-CceeEEecCCCCCeEEEEEe-CC-EE
Q 008820 328 HEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGD---------RTIKAWSLLD-GTLSCTMSGHKSAVSTLAVC-NG-VL 395 (552)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~d---------g~i~iwd~~~-~~~~~~~~~h~~~v~~l~~~-~~-~l 395 (552)
.. +.............-..+.++|+++++...+ ..-.+|.+.. ++... +..+....+.++|+ ++ .+
T Consensus 86 ~~-~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~-~~~~~~~pngi~~spdg~~l 163 (297)
T 3g4e_A 86 VV-LATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKK-YFDQVDISNGLDWSLDHKIF 163 (297)
T ss_dssp EE-EEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEE-EEEEESBEEEEEECTTSCEE
T ss_pred EE-EEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEE-EeeccccccceEEcCCCCEE
Confidence 21 1111111111222334677888855544221 2234554432 33332 32233456889998 44 44
Q ss_pred -EEEeCCCcEEEEEC--CCCcee--EEEec-C-CCCceEEEEEEcCCCCEEEEEECCCcEEEEeC--Ccceeeeecccce
Q 008820 396 -YSGSRDGTIRLWSL--SDHSLL--TVLEE-D-SSGAVSSVLSLTAVQHTLVVSHESGSIKVWRN--DKFMKSMQTHKGS 466 (552)
Q Consensus 396 -~s~~~dg~i~iwd~--~~~~~~--~~~~~-~-~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~--~~~~~~~~~h~~~ 466 (552)
++.+.++.|..||+ .++... ..+.. . ..+.. .-++++++|++.++...++.|..||. ++.+..+..+...
T Consensus 164 yv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p-~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p~~~ 242 (297)
T 3g4e_A 164 YYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIP-DGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKLPVDK 242 (297)
T ss_dssp EEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEE-EEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEECSSSB
T ss_pred EEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCC-CeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEECCCCC
Confidence 55666889999997 455432 11211 1 11223 33689999988888778889999996 4567777777777
Q ss_pred EEEEEe---cCCEEEEEe
Q 008820 467 VFAVFL---EGKWLFTGG 481 (552)
Q Consensus 467 v~~v~~---~~~~l~sgs 481 (552)
++++.| +++.|+..+
T Consensus 243 ~t~~~f~g~d~~~L~vt~ 260 (297)
T 3g4e_A 243 TTSCCFGGKNYSEMYVTC 260 (297)
T ss_dssp EEEEEEESGGGCEEEEEE
T ss_pred ceEEEEeCCCCCEEEEEc
Confidence 888887 445555444
No 471
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.95 E-value=4.2e-07 Score=97.32 Aligned_cols=239 Identities=13% Similarity=0.092 Sum_probs=143.7
Q ss_pred cCccceEEEEEc--CCEEEE-----EeCCCcEEEEeCCCCeEEEE-EeCCCCCeEEEEEecCCCCEEEEEcCC-------
Q 008820 250 GHRDCVTGLAVG--GGFLFS-----SSFDKSIHVWSLKDFSHVHT-FKGHDHKVMAVVYVDEDQPLCISGDSG------- 314 (552)
Q Consensus 250 ~H~~~V~~l~~s--~~~l~s-----~s~dg~I~iwd~~~~~~~~~-~~~h~~~v~~v~~~~~~~~~l~s~~~d------- 314 (552)
+|...+..++|| |++||- |+.+.+|++||+.+++.+.. +.. .....++|+ +++.++++...+
T Consensus 126 ~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~--~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~ 202 (693)
T 3iuj_A 126 DGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKD--VKFSGISWL-GNEGFFYSSYDKPDGSELS 202 (693)
T ss_dssp TSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEE--EESCCCEEE-TTTEEEEEESSCCC-----
T ss_pred CCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccccCC--ceeccEEEe-CCCEEEEEEecCccccccc
Confidence 456678888999 787774 33346799999999986543 221 113567899 777555444332
Q ss_pred -----CcEEEEeCCCCCCCcc-cccccc-CCCceeeeEEEEeeCCCEEEEee----CCCcEEEEECCCCc-eeEEecCCC
Q 008820 315 -----GGIFVWSFSFPLGHEP-LKKWNE-EKDWRYSGIHALTTSGRYLYTGS----GDRTIKAWSLLDGT-LSCTMSGHK 382 (552)
Q Consensus 315 -----g~i~vwd~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~l~sgs----~dg~i~iwd~~~~~-~~~~~~~h~ 382 (552)
..|++|++.++..... +..... +... ..-..+++++++|+... .++.|+++|+.++. ....+..+.
T Consensus 203 ~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~--~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~ 280 (693)
T 3iuj_A 203 ARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHR--YVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDL 280 (693)
T ss_dssp --CCCCEEEEEETTSCGGGCEEEESCSGGGCCS--EEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSS
T ss_pred ccCCCcEEEEEECCCCcccceEEEecCCCCCeE--EEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCC
Confidence 2499999887543221 211111 1111 12246799999665433 23589999998764 345565566
Q ss_pred CCeEEEEEe-CCEE-EEEeCC---CcEEEEECCCCce--eEEEecCCCCceEEEEEEcCCCCEEEEEECCC---cEEEEe
Q 008820 383 SAVSTLAVC-NGVL-YSGSRD---GTIRLWSLSDHSL--LTVLEEDSSGAVSSVLSLTAVQHTLVVSHESG---SIKVWR 452 (552)
Q Consensus 383 ~~v~~l~~~-~~~l-~s~~~d---g~i~iwd~~~~~~--~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg---~i~iwd 452 (552)
......... ++.| +....+ +.|..+|+.++.. ...+..+.... . .++++++.|+....++ .|++||
T Consensus 281 ~~~~~~~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~---~-~~s~~g~~lv~~~~~~g~~~l~~~d 356 (693)
T 3iuj_A 281 DADVSLVDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQV---L-TVHSGSGYLFAEYMVDATARVEQFD 356 (693)
T ss_dssp SSCEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSC---E-EEEEETTEEEEEEEETTEEEEEEEC
T ss_pred CceEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCE---E-EEEEECCEEEEEEEECCeeEEEEEE
Confidence 655554333 5544 444443 6799999988754 34454443332 2 7888888887766543 688888
Q ss_pred CCc-ceeeeec-ccceEEEEEe--cCCEEEEEeCC----CeEEEEecCCCeee
Q 008820 453 NDK-FMKSMQT-HKGSVFAVFL--EGKWLFTGGWD----KTVSVQELAGDEFE 497 (552)
Q Consensus 453 ~~~-~~~~~~~-h~~~v~~v~~--~~~~l~sgs~d----g~i~iwd~~~~~~~ 497 (552)
... ....+.. +.+.+..+++ ++..++....+ ++++.||+.+++..
T Consensus 357 ~~g~~~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~~~ 409 (693)
T 3iuj_A 357 YEGKRVREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGAIS 409 (693)
T ss_dssp TTSCEEEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCCEE
T ss_pred CCCCeeEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCeEE
Confidence 653 3333332 3345555554 66655544434 78999999877544
No 472
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.94 E-value=1.1e-07 Score=92.50 Aligned_cols=257 Identities=10% Similarity=-0.069 Sum_probs=160.8
Q ss_pred cEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCCEEEEEc---------CCCcEEEEeCCCCCCCccccccccCC--Cce
Q 008820 273 SIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGD---------SGGGIFVWSFSFPLGHEPLKKWNEEK--DWR 341 (552)
Q Consensus 273 ~I~iwd~~~~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~---------~dg~i~vwd~~~~~~~~~~~~~~~~~--~~~ 341 (552)
+|.+.|..+++.+.++.....+ .++++|++..+.++.+ .++.|.+||..+.+....+....... ...
T Consensus 47 ~vsvID~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~ 124 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGP 124 (368)
T ss_dssp EEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSC
T ss_pred eEEEEECCCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCC
Confidence 7889999999999999866666 7999999887766653 47899999999877655554320000 000
Q ss_pred eeeEEEEeeCCCEEEEeeC--CCcEEE--EECCCCceeEEecCCCCCeEEEEEe-CCEEEEEeCCCcEEEEECCC-----
Q 008820 342 YSGIHALTTSGRYLYTGSG--DRTIKA--WSLLDGTLSCTMSGHKSAVSTLAVC-NGVLYSGSRDGTIRLWSLSD----- 411 (552)
Q Consensus 342 ~~~~~~~~~~~~~l~sgs~--dg~i~i--wd~~~~~~~~~~~~h~~~v~~l~~~-~~~l~s~~~dg~i~iwd~~~----- 411 (552)
...-..++|+|++++++.. +..+.+ +|..+ +..+..-. . ..+... ...+++.+.||.+.+.|+.+
T Consensus 125 ~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v~~-~-~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~ 199 (368)
T 1mda_H 125 RVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTKSAS-C-FHIHPGAAATHYLGSCPASLAASDLAAAPAAA 199 (368)
T ss_dssp CTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEECSS-C-CCCEEEETTEEECCCCTTSCEEEECCSSCCCC
T ss_pred CcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEECCC-c-eEEccCCCeEEEEEcCCCCEEEEECccccccC
Confidence 1113589999998888764 467888 88876 44443211 1 112223 34667778899999999986
Q ss_pred CceeEEEe-cCCCCceEEEEEEcCCCCEEEEEECCCcEEEEeCCc----ceeeeec------------ccceEEEEEecC
Q 008820 412 HSLLTVLE-EDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDK----FMKSMQT------------HKGSVFAVFLEG 474 (552)
Q Consensus 412 ~~~~~~~~-~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~~----~~~~~~~------------h~~~v~~v~~~~ 474 (552)
++...... .-..+.... . .+++..++..+. +.+.+.|... .+..+.. +......+++++
T Consensus 200 ~~v~~~~t~~i~vg~~P~--~-~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg 275 (368)
T 1mda_H 200 GIVGAQCTGAQNCSSQAA--Q-ANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNT 275 (368)
T ss_dssp EECCCCSCTTSCBCSCCE--E-ETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTT
T ss_pred CeEEEEeeeeeeCCCCcc--c-cccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCC
Confidence 43221100 000011111 3 555666555556 8999999642 1121110 111224577788
Q ss_pred CEEEEEeC---------CCeEEEEecCCCeeeeeeccCCCcccCcceEEEEEeC-Ce--EEEEe-CCCeEEEEEecCCcc
Q 008820 475 KWLFTGGW---------DKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQ-GK--LFVGC-ADRTVKIALCNRQIP 541 (552)
Q Consensus 475 ~~l~sgs~---------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~~-~~--l~s~s-~Dg~v~iw~~~~~~~ 541 (552)
+.++.+.. ++.+.++|+.+.+....+.. ......+++++ +. +++.. .++.|.++|.. +.+
T Consensus 276 ~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~v------g~~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~-t~k 348 (368)
T 1mda_H 276 DGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISN------GHDSDAIIAAQDGASDNYANSAGTEVLDIYDAA-SDQ 348 (368)
T ss_dssp TEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEE------EEEECEEEECCSSSCEEEEEETTTTEEEEEESS-SCE
T ss_pred CEEEEEeccccCcccccCCCEEEEECCCCeEEEEEEC------CCCcceEEECCCCCEEEEEccCCCCeEEEEECC-CCc
Confidence 88886543 23566999998877655433 33577889985 33 56666 59999999997 565
Q ss_pred eeEEEe
Q 008820 542 EIFSLL 547 (552)
Q Consensus 542 ~~~~~~ 547 (552)
.+.++.
T Consensus 349 vv~~I~ 354 (368)
T 1mda_H 349 DQSSVE 354 (368)
T ss_dssp EEEECC
T ss_pred EEEEEE
Confidence 565554
No 473
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.93 E-value=1.5e-06 Score=90.43 Aligned_cols=276 Identities=12% Similarity=0.057 Sum_probs=168.7
Q ss_pred cCCEEEEEeC-CCcEEEEeC-CCCeEEEEEeCCCCC-----------eEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCC
Q 008820 261 GGGFLFSSSF-DKSIHVWSL-KDFSHVHTFKGHDHK-----------VMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLG 327 (552)
Q Consensus 261 s~~~l~s~s~-dg~I~iwd~-~~~~~~~~~~~h~~~-----------v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~ 327 (552)
.+..++.++. ++.|..+|. .+|+.+..+...... -..+++. ++ .++.++.|+.+..+|..+++.
T Consensus 61 ~~g~vyv~~~~~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~v~v~~~dg~l~alD~~tG~~ 137 (571)
T 2ad6_A 61 IGDMMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYG--AG-QIVKKQANGHLLALDAKTGKI 137 (571)
T ss_dssp ETTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEE--TT-EEEEECTTSEEEEEETTTCCE
T ss_pred ECCEEEEEeCCCCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEEE--CC-EEEEEeCCCEEEEEECCCCCE
Confidence 4777777777 899999999 999999887643210 0122332 23 567788899999999988876
Q ss_pred CccccccccCC--CceeeeEEEEeeCCCEEEEeeC------CCcEEEEECCCCceeEEecCCCCC---------------
Q 008820 328 HEPLKKWNEEK--DWRYSGIHALTTSGRYLYTGSG------DRTIKAWSLLDGTLSCTMSGHKSA--------------- 384 (552)
Q Consensus 328 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~sgs~------dg~i~iwd~~~~~~~~~~~~h~~~--------------- 384 (552)
........... .....++ ..+..+++++. ++.|+.+|.++|+.+.++......
T Consensus 138 ~W~~~~~~~~~~~~~~~~P~----v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~ 213 (571)
T 2ad6_A 138 NWEVEVCDPKVGSTLTQAPF----VAKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPH 213 (571)
T ss_dssp EEEEECCCGGGTCBCCSCCE----EETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGG
T ss_pred EEEecCCCCCccceeccCCE----EECCEEEEEecCCccCCCCEEEEEECCCCcEEEEEccCCCccccccCccccccccc
Confidence 54433211000 0001111 12345555554 799999999999999887532211
Q ss_pred ----------------------e-EEEEEe--CCEEEEEeCC----------------CcEEEEECCCCceeEEEecCCC
Q 008820 385 ----------------------V-STLAVC--NGVLYSGSRD----------------GTIRLWSLSDHSLLTVLEEDSS 423 (552)
Q Consensus 385 ----------------------v-~~l~~~--~~~l~s~~~d----------------g~i~iwd~~~~~~~~~~~~~~~ 423 (552)
+ ..+++. .+.++.+..+ +.|..+|.++|+.+..+.....
T Consensus 214 ~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~ 293 (571)
T 2ad6_A 214 YGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPH 293 (571)
T ss_dssp GCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTT
T ss_pred ccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCC
Confidence 0 134555 3566666532 3599999999999988875421
Q ss_pred C-------ceEEEEEEcCCCC---EEEEEECCCcEEEEeCC--cceeeeeccc-------------ceE-----------
Q 008820 424 G-------AVSSVLSLTAVQH---TLVVSHESGSIKVWRND--KFMKSMQTHK-------------GSV----------- 467 (552)
Q Consensus 424 ~-------~~~~~~~~s~~~~---~l~~g~~dg~i~iwd~~--~~~~~~~~h~-------------~~v----------- 467 (552)
. ....+.....+|+ .++.++.+|.++++|.. +.+....... .++
T Consensus 294 d~~d~~~~~~p~l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~ 373 (571)
T 2ad6_A 294 DEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDH 373 (571)
T ss_dssp CSSCCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTC
T ss_pred cccccccCCCCEEEecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCccccccccccCCceecccccCCCCCC
Confidence 1 1111123334674 57788899999999954 3333222110 111
Q ss_pred -----------------EEEEecCCEEEEEe-------------------------------------CCCeEEEEecCC
Q 008820 468 -----------------FAVFLEGKWLFTGG-------------------------------------WDKTVSVQELAG 493 (552)
Q Consensus 468 -----------------~~v~~~~~~l~sgs-------------------------------------~dg~i~iwd~~~ 493 (552)
.+++++...++..+ .+|.|..||..+
T Consensus 374 ~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~t 453 (571)
T 2ad6_A 374 KGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTT 453 (571)
T ss_dssp CEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTT
T ss_pred CceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECCC
Confidence 12333445555443 357899999999
Q ss_pred CeeeeeeccCCCcccCcceEEEEEeCCeEEEEeCCCeEEEEEecCCcceeEEEec
Q 008820 494 DEFEEDVIPTGAIPCGSVITALLYWQGKLFVGCADRTVKIALCNRQIPEIFSLLL 548 (552)
Q Consensus 494 ~~~~~~~~~~~~~~~~~~v~~l~~~~~~l~s~s~Dg~v~iw~~~~~~~~~~~~~g 548 (552)
++............ . ..+...++.+++++.||.|+.||.. +++.+.++..
T Consensus 454 G~~~W~~~~~~~~~-~---~~~~t~gg~v~~g~~dg~l~a~D~~-tG~~lw~~~~ 503 (571)
T 2ad6_A 454 GKAKWTKWEKFAAW-G---GTLYTKGGLVWYATLDGYLKALDNK-DGKELWNFKM 503 (571)
T ss_dssp CCEEEEEEESSCCC-S---BCEEETTTEEEEECTTSEEEEEETT-TCCEEEEEEC
T ss_pred CCEEEEecCCCCcc-c---eeEEECCCEEEEEcCCCeEEEEECC-CCCEEEEEeC
Confidence 88877654432111 1 1123346888889999999999987 6777766653
No 474
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.93 E-value=4.7e-07 Score=96.95 Aligned_cols=232 Identities=13% Similarity=0.072 Sum_probs=140.6
Q ss_pred CCCCeEEEEEecCCCCEEEEEcCC----CcEEEEeCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCc---
Q 008820 291 HDHKVMAVVYVDEDQPLCISGDSG----GGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRT--- 363 (552)
Q Consensus 291 h~~~v~~v~~~~~~~~~l~s~~~d----g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~--- 363 (552)
|...+..++|+|++..++++.+.. ..|++||+.+++.... .... ......+|+ |++.|+.++.+..
T Consensus 127 ~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~--~~~~----~k~~~~~Ws-Dg~~l~y~~~~~~~~~ 199 (693)
T 3iuj_A 127 GTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLET--PLKD----VKFSGISWL-GNEGFFYSSYDKPDGS 199 (693)
T ss_dssp SCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEE--EEEE----EESCCCEEE-TTTEEEEEESSCCC--
T ss_pred CcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCcc--ccCC----ceeccEEEe-CCCEEEEEEecCcccc
Confidence 455788899999988776665444 4699999998753221 1110 111234688 9998888887743
Q ss_pred ----------EEEEECCCCce--eEEe--cC-CCCCeEEEEEe-CC-EE-EEEeC---CCcEEEEECCCCc-eeEEEecC
Q 008820 364 ----------IKAWSLLDGTL--SCTM--SG-HKSAVSTLAVC-NG-VL-YSGSR---DGTIRLWSLSDHS-LLTVLEED 421 (552)
Q Consensus 364 ----------i~iwd~~~~~~--~~~~--~~-h~~~v~~l~~~-~~-~l-~s~~~---dg~i~iwd~~~~~-~~~~~~~~ 421 (552)
|++|++.++.. ...+ .. |...+.++.++ ++ +| ++.+. ++.|+++|+.++. ....+..+
T Consensus 200 ~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~ 279 (693)
T 3iuj_A 200 ELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGD 279 (693)
T ss_dssp -----CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECS
T ss_pred cccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCC
Confidence 99999987653 2233 33 44557788898 44 44 44432 3589999998764 34455444
Q ss_pred CCCceEEEEEEcCCCCEEEEEEC-C---CcEEEEeCCcc----eeeeecccceEEEEEecCCEEEEEeCC-C--eEEEEe
Q 008820 422 SSGAVSSVLSLTAVQHTLVVSHE-S---GSIKVWRNDKF----MKSMQTHKGSVFAVFLEGKWLFTGGWD-K--TVSVQE 490 (552)
Q Consensus 422 ~~~~~~~~~~~s~~~~~l~~g~~-d---g~i~iwd~~~~----~~~~~~h~~~v~~v~~~~~~l~sgs~d-g--~i~iwd 490 (552)
.. .... .+++++..|+..+. + +.|..+|+... .+.+..|...+..+++++++|+....+ + .|++||
T Consensus 280 ~~-~~~~--~~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~s~~g~~lv~~~~~~g~~~l~~~d 356 (693)
T 3iuj_A 280 LD-ADVS--LVDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVLTVHSGSGYLFAEYMVDATARVEQFD 356 (693)
T ss_dssp SS-SCEE--EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEETTEEEEEEEETTEEEEEEEC
T ss_pred CC-ceEE--EEeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEEEEEEECCEEEEEEEECCeeEEEEEE
Confidence 32 2222 25566665554443 3 57888886542 245555554444777888887766554 3 689999
Q ss_pred cCCCeeeeeeccCCCcccCcceEEEEEeC--CeEEEEeCC----CeEEEEEec
Q 008820 491 LAGDEFEEDVIPTGAIPCGSVITALLYWQ--GKLFVGCAD----RTVKIALCN 537 (552)
Q Consensus 491 ~~~~~~~~~~~~~~~~~~~~~v~~l~~~~--~~l~s~s~D----g~v~iw~~~ 537 (552)
+.++........ ....+..+.+++ +.++....+ +.++.||+.
T Consensus 357 ~~g~~~~~l~~p-----~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~ 404 (693)
T 3iuj_A 357 YEGKRVREVALP-----GLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPK 404 (693)
T ss_dssp TTSCEEEEECCS-----SSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTT
T ss_pred CCCCeeEEeecC-----CCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECC
Confidence 986644322111 134466666663 334443333 788888875
No 475
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.92 E-value=7.2e-07 Score=85.20 Aligned_cols=238 Identities=11% Similarity=0.064 Sum_probs=140.5
Q ss_pred eCCCCCeEEEEEecCCCCEEEE-------EcCCCcEEEEeCCCCCCCccccccc-cCCCceeeeEEEEeeC-CCEEEEee
Q 008820 289 KGHDHKVMAVVYVDEDQPLCIS-------GDSGGGIFVWSFSFPLGHEPLKKWN-EEKDWRYSGIHALTTS-GRYLYTGS 359 (552)
Q Consensus 289 ~~h~~~v~~v~~~~~~~~~l~s-------~~~dg~i~vwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~l~sgs 359 (552)
...-....+++|.+++ .++++ +..++.|..||..+++... +.... .... ......++.++ ++ ++.++
T Consensus 14 ~~~~~~~~~~~~~~~g-~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~-~~~~~~~~~~-~~~~~i~~~~~~g~-l~v~~ 89 (314)
T 1pjx_A 14 TEDIPGAEGPVFDKNG-DFYIVAPEVEVNGKPAGEILRIDLKTGKKTV-ICKPEVNGYG-GIPAGCQCDRDANQ-LFVAD 89 (314)
T ss_dssp ECCCTTCEEEEECTTS-CEEEEETTCEETTEECCEEEEECTTTCCEEE-EECCEETTEE-CCEEEEEECSSSSE-EEEEE
T ss_pred hccCCCccCceECCCC-CEEEEEeccccCCCCCCEEEEEeCCCCcEEE-EEecccCCCC-CCCceEEEecCCCc-EEEEE
Confidence 3344566899998765 46666 5678999999987654221 11100 0000 11112345666 54 44444
Q ss_pred CCCcEEEEECCCCceeEE-ecC----CCCCeEEEEEe-CC-EEEEEeCC---------------CcEEEEECCCCceeEE
Q 008820 360 GDRTIKAWSLLDGTLSCT-MSG----HKSAVSTLAVC-NG-VLYSGSRD---------------GTIRLWSLSDHSLLTV 417 (552)
Q Consensus 360 ~dg~i~iwd~~~~~~~~~-~~~----h~~~v~~l~~~-~~-~l~s~~~d---------------g~i~iwd~~~~~~~~~ 417 (552)
..+.|.+||.. ++.... ... ....+.+++++ ++ +.++...+ +.|..||.. ++....
T Consensus 90 ~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~ 167 (314)
T 1pjx_A 90 MRLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQV 167 (314)
T ss_dssp TTTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEE
T ss_pred CCCCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEe
Confidence 44579999988 665433 221 12347899998 44 44444444 567777765 554333
Q ss_pred EecCCCCceEEEEEEc----CCCCEEEEE-ECCCcEEEEeCC---c-----ceeeeeccc-ceEEEEEe--cCCEEEEEe
Q 008820 418 LEEDSSGAVSSVLSLT----AVQHTLVVS-HESGSIKVWRND---K-----FMKSMQTHK-GSVFAVFL--EGKWLFTGG 481 (552)
Q Consensus 418 ~~~~~~~~~~~~~~~s----~~~~~l~~g-~~dg~i~iwd~~---~-----~~~~~~~h~-~~v~~v~~--~~~~l~sgs 481 (552)
.... ..... ++++ ++++.++++ ..++.|.+||.. + ....+..+. .....+.+ +|+++++..
T Consensus 168 ~~~~--~~~~~-i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~ 244 (314)
T 1pjx_A 168 DTAF--QFPNG-IAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANW 244 (314)
T ss_dssp EEEE--SSEEE-EEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEE
T ss_pred ccCC--CCcce-EEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEc
Confidence 2221 12233 6788 998766555 467899999853 1 112233333 45566665 788888877
Q ss_pred CCCeEEEEecCCCeeeeeeccCCCcccCcceEEEEEeC-Ce-EEEEe-CCCeEEEEEecCCc
Q 008820 482 WDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQ-GK-LFVGC-ADRTVKIALCNRQI 540 (552)
Q Consensus 482 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~~-~~-l~s~s-~Dg~v~iw~~~~~~ 540 (552)
.++.|.+||..+++........ ...+.++++++ +. |++++ .++.|..|+++..+
T Consensus 245 ~~~~i~~~d~~~g~~~~~~~~~-----~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~~g 301 (314)
T 1pjx_A 245 GSSHIEVFGPDGGQPKMRIRCP-----FEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQRNG 301 (314)
T ss_dssp TTTEEEEECTTCBSCSEEEECS-----SSCEEEEEECTTSSEEEEEETTTTEEEEEECSSCB
T ss_pred CCCEEEEEcCCCCcEeEEEeCC-----CCCceeEEECCCCCEEEEEeCCCCeEEEEeCCCCC
Confidence 8899999999865544333221 34588899974 43 65554 56899999987543
No 476
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.92 E-value=1.2e-06 Score=83.07 Aligned_cols=222 Identities=13% Similarity=0.105 Sum_probs=134.5
Q ss_pred EeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEE
Q 008820 288 FKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAW 367 (552)
Q Consensus 288 ~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iw 367 (552)
+..+..-..+..|+++++.++++...++.|..||..++.. ..+.... . ....++++++++++ +. ++.|.+|
T Consensus 8 ~~~~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~----~~~~~~~--~-~~~i~~~~dG~l~v-~~-~~~l~~~ 78 (297)
T 3g4e_A 8 LPENCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQV----QRVTMDA--P-VSSVALRQSGGYVA-TI-GTKFCAL 78 (297)
T ss_dssp ECCCCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCE----EEEECSS--C-EEEEEEBTTSSEEE-EE-TTEEEEE
T ss_pred eccCCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcE----EEEeCCC--c-eEEEEECCCCCEEE-EE-CCeEEEE
Confidence 3344455678899998888888888999999999886532 1111111 1 22346778888444 44 5679999
Q ss_pred ECCCCceeEEecC----CCCCeEEEEEe-CCEEEEEe-C---------CCcEEEEECCC-CceeEEEecCCCCceEEEEE
Q 008820 368 SLLDGTLSCTMSG----HKSAVSTLAVC-NGVLYSGS-R---------DGTIRLWSLSD-HSLLTVLEEDSSGAVSSVLS 431 (552)
Q Consensus 368 d~~~~~~~~~~~~----h~~~v~~l~~~-~~~l~s~~-~---------dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~ 431 (552)
|..+++....... ....++.++++ ++.++.++ . ...-.+|.+.. ++....... .. ...-++
T Consensus 79 d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~~--~~-~pngi~ 155 (297)
T 3g4e_A 79 NWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFDQ--VD-ISNGLD 155 (297)
T ss_dssp ETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEEE--ES-BEEEEE
T ss_pred ECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEeec--cc-cccceE
Confidence 9988765433321 12347888888 45444443 1 12334554432 333222221 11 223379
Q ss_pred EcCCCCEEEEE-ECCCcEEEEeCC--c--c-----eeeeecccceEEEEEe--cCCEEEEEeCCCeEEEEecCCCeeeee
Q 008820 432 LTAVQHTLVVS-HESGSIKVWRND--K--F-----MKSMQTHKGSVFAVFL--EGKWLFTGGWDKTVSVQELAGDEFEED 499 (552)
Q Consensus 432 ~s~~~~~l~~g-~~dg~i~iwd~~--~--~-----~~~~~~h~~~v~~v~~--~~~~l~sgs~dg~i~iwd~~~~~~~~~ 499 (552)
++|+++.++.+ +.++.|.+||.. . . ...+..+......+.+ +|++.++...++.|..||..+++....
T Consensus 156 ~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~ 235 (297)
T 3g4e_A 156 WSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQT 235 (297)
T ss_dssp ECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEE
T ss_pred EcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEE
Confidence 99999877554 557889999852 1 1 1122223345566665 787777777788999999987766655
Q ss_pred eccCCCcccCcceEEEEEe-C--CeEEEEe
Q 008820 500 VIPTGAIPCGSVITALLYW-Q--GKLFVGC 526 (552)
Q Consensus 500 ~~~~~~~~~~~~v~~l~~~-~--~~l~s~s 526 (552)
.... ...+++++|. + +.|++++
T Consensus 236 i~~p-----~~~~t~~~f~g~d~~~L~vt~ 260 (297)
T 3g4e_A 236 VKLP-----VDKTTSCCFGGKNYSEMYVTC 260 (297)
T ss_dssp EECS-----SSBEEEEEEESGGGCEEEEEE
T ss_pred EECC-----CCCceEEEEeCCCCCEEEEEc
Confidence 4432 3458999998 4 3455443
No 477
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.91 E-value=4.7e-07 Score=86.38 Aligned_cols=230 Identities=13% Similarity=0.087 Sum_probs=140.5
Q ss_pred EEeecCccceEEEEEc--CC-EEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeC
Q 008820 246 KDLQGHRDCVTGLAVG--GG-FLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSF 322 (552)
Q Consensus 246 ~~l~~H~~~V~~l~~s--~~-~l~s~s~dg~I~iwd~~~~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~ 322 (552)
..+..+.....+..|+ ++ ++++...++.|..|+. +++ ...+..+...+..+++.+++. ++++...++.|..|+.
T Consensus 38 ~~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~-~~~~~~~~~~~~gl~~d~dG~-l~v~~~~~~~v~~~~~ 114 (305)
T 3dr2_A 38 LTLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGT-VDVLLDATAFTNGNAVDAQQR-LVHCEHGRRAITRSDA 114 (305)
T ss_dssp EEEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEET-TSC-EEEEEESCSCEEEEEECTTSC-EEEEETTTTEEEEECT
T ss_pred EEEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeC-CCC-EEEEeCCCCccceeeECCCCC-EEEEECCCCEEEEECC
Confidence 3344455667788887 55 6777778899999997 454 345555677889999998765 6566566688999987
Q ss_pred CCCCCCccccccccCCCceeeeEEEEeeCCCEEEE----eeC-------------CCcEEEEECCCCceeEEecCCCCCe
Q 008820 323 SFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYT----GSG-------------DRTIKAWSLLDGTLSCTMSGHKSAV 385 (552)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s----gs~-------------dg~i~iwd~~~~~~~~~~~~h~~~v 385 (552)
+ +.. ..+.............-..+.++|+..++ |.. .+.|+.||..+++..... .....
T Consensus 115 ~-g~~-~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~~~p 190 (305)
T 3dr2_A 115 D-GQA-HLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--DLDHP 190 (305)
T ss_dssp T-SCE-EEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--EESSE
T ss_pred C-CCE-EEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--cCCCC
Confidence 5 321 11111000000001112467788887776 432 256888887777655433 33456
Q ss_pred EEEEEe-CC-EEEEEeCC------CcEEEEECCCCcee--EEEecCCCCceEEEEEEcCCCCEEEEEECCCcEEEEeCC-
Q 008820 386 STLAVC-NG-VLYSGSRD------GTIRLWSLSDHSLL--TVLEEDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRND- 454 (552)
Q Consensus 386 ~~l~~~-~~-~l~s~~~d------g~i~iwd~~~~~~~--~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~- 454 (552)
..++|+ ++ .|+.+... +.|.+||+..+... ..+.....+.... ++++++|++. +++.+ .|.+|+..
T Consensus 191 ~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdg-i~~d~~G~lw-v~~~~-gv~~~~~~g 267 (305)
T 3dr2_A 191 NGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDG-FCVDRGGWLW-SSSGT-GVCVFDSDG 267 (305)
T ss_dssp EEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCS-EEECTTSCEE-ECCSS-EEEEECTTS
T ss_pred cceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCe-EEECCCCCEE-EecCC-cEEEECCCC
Confidence 789999 44 67766655 78999998765421 1121111122223 6889999844 44444 49999964
Q ss_pred cceeeeecccceEEEEEe--cCCEEEEEeCCCeE
Q 008820 455 KFMKSMQTHKGSVFAVFL--EGKWLFTGGWDKTV 486 (552)
Q Consensus 455 ~~~~~~~~h~~~v~~v~~--~~~~l~sgs~dg~i 486 (552)
+.+..+..+. .+.++.| +++.|+.++.++..
T Consensus 268 ~~~~~~~~~~-~~~~~~f~~d~~~L~it~~~~l~ 300 (305)
T 3dr2_A 268 QLLGHIPTPG-TASNCTFDQAQQRLFITGGPCLW 300 (305)
T ss_dssp CEEEEEECSS-CCCEEEECTTSCEEEEEETTEEE
T ss_pred CEEEEEECCC-ceeEEEEeCCCCEEEEEcCCeEE
Confidence 4445555444 3556666 77888888766433
No 478
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.90 E-value=1.5e-06 Score=90.29 Aligned_cols=279 Identities=10% Similarity=0.043 Sum_probs=170.6
Q ss_pred cCCEEEEEeC-CCcEEEEeC-CCCeEEEEEeCCCCC-----------eEEEEEecCCCC---EEEEEcCCCcEEEEeCCC
Q 008820 261 GGGFLFSSSF-DKSIHVWSL-KDFSHVHTFKGHDHK-----------VMAVVYVDEDQP---LCISGDSGGGIFVWSFSF 324 (552)
Q Consensus 261 s~~~l~s~s~-dg~I~iwd~-~~~~~~~~~~~h~~~-----------v~~v~~~~~~~~---~l~s~~~dg~i~vwd~~~ 324 (552)
.+..++.++. ++.|..+|. .+|+.+..+...... ...+++.|.+.. .++.++.|+.+..+|..+
T Consensus 61 ~~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~AlDa~T 140 (599)
T 1w6s_A 61 VDGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAET 140 (599)
T ss_dssp ETTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETTT
T ss_pred ECCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCCEEEEEECCC
Confidence 4777877877 899999999 999999988643221 123455443333 367788899999999988
Q ss_pred CCCCccccccccCC--CceeeeEEEEeeCCCEEEEee------CCCcEEEEECCCCceeEEecCCCCC------------
Q 008820 325 PLGHEPLKKWNEEK--DWRYSGIHALTTSGRYLYTGS------GDRTIKAWSLLDGTLSCTMSGHKSA------------ 384 (552)
Q Consensus 325 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~sgs------~dg~i~iwd~~~~~~~~~~~~h~~~------------ 384 (552)
++............ .....++ + .+ ..+++++ .+|.|+.+|.++|+.+..+......
T Consensus 141 G~~~W~~~~~~~~~~~~~~ssP~--v-~~-g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~ 216 (599)
T 1w6s_A 141 GETVWKVENSDIKVGSTLTIAPY--V-VK-DKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIK 216 (599)
T ss_dssp CCEEEEEECCCGGGTCBCCSCCE--E-ET-TEEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTT
T ss_pred CCEEEeecCCCCCccceeecCCE--E-EC-CEEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCCccccccccccccc
Confidence 87654432211000 0000111 1 23 4555555 3899999999999999887532211
Q ss_pred -------------------------e-EEEEEe--CCEEEEEeCC----------------CcEEEEECCCCceeEEEec
Q 008820 385 -------------------------V-STLAVC--NGVLYSGSRD----------------GTIRLWSLSDHSLLTVLEE 420 (552)
Q Consensus 385 -------------------------v-~~l~~~--~~~l~s~~~d----------------g~i~iwd~~~~~~~~~~~~ 420 (552)
+ ..+++. .++++.+..+ +.|..+|.++|+.+..++.
T Consensus 217 ~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~ 296 (599)
T 1w6s_A 217 NPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQK 296 (599)
T ss_dssp CGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEES
T ss_pred cccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeec
Confidence 0 134454 5577777665 3899999999999988876
Q ss_pred CCCCc-------eEEEEEEc-CCC---CEEEEEECCCcEEEEeCC--cceeeeecc-------------cceE-------
Q 008820 421 DSSGA-------VSSVLSLT-AVQ---HTLVVSHESGSIKVWRND--KFMKSMQTH-------------KGSV------- 467 (552)
Q Consensus 421 ~~~~~-------~~~~~~~s-~~~---~~l~~g~~dg~i~iwd~~--~~~~~~~~h-------------~~~v------- 467 (552)
.+... ...+.... .+| ..++.++.+|.++++|.. +.+...... ..++
T Consensus 297 ~~~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~ 376 (599)
T 1w6s_A 297 TPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANKLDDTVNVFKSVDLKTGQPVRDPEYGT 376 (599)
T ss_dssp STTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCCEEECGGGCC
T ss_pred CCCccccccCCCccEEEeccccCCcEEEEEEEECCCcEEEEEECCCCCEeecccccCCcccccccccCCCceeeccccCC
Confidence 53211 11112222 567 467778899999999954 333222110 0011
Q ss_pred ---------------------EEEEecCCEEEEE---------------------------------e------CCCeEE
Q 008820 468 ---------------------FAVFLEGKWLFTG---------------------------------G------WDKTVS 487 (552)
Q Consensus 468 ---------------------~~v~~~~~~l~sg---------------------------------s------~dg~i~ 487 (552)
.+++++.+++++. + .+|.|.
T Consensus 377 ~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~p~~~~~~~~~~G~l~ 456 (599)
T 1w6s_A 377 RMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMYPGPKGDRQNYEGLGQIK 456 (599)
T ss_dssp CTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSBTTTTBCCEEEE
T ss_pred CCCCCccEeccCcccccCCCCccCCCCCCEEEEeccccceeeecccccccCCcceecccceeccCCcCCcccCCCcCeEE
Confidence 1222222222221 1 357899
Q ss_pred EEecCCCeeeeeeccCCCcccCcceEEEEEeCCeEEEEeCCCeEEEEEecCCcceeEEEec
Q 008820 488 VQELAGDEFEEDVIPTGAIPCGSVITALLYWQGKLFVGCADRTVKIALCNRQIPEIFSLLL 548 (552)
Q Consensus 488 iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~l~s~s~Dg~v~iw~~~~~~~~~~~~~g 548 (552)
.||+.+++........... .. ..+...++.++.++.||.++.||.+ +++++.++.-
T Consensus 457 A~D~~tG~~~W~~~~~~~~--~~--g~~~tagg~vf~gt~dg~l~A~D~~-tG~~lW~~~l 512 (599)
T 1w6s_A 457 AYNAITGDYKWEKMERFAV--WG--GTMATAGDLVFYGTLDGYLKARDSD-TGDLLWKFKI 512 (599)
T ss_dssp EECTTTCCEEEEEEESSCC--CS--BCEEETTTEEEEECTTSEEEEEETT-TCCEEEEEEC
T ss_pred EEECCCCCEEeEecCCCCc--cC--cceEecCCEEEEECCCCeEEEEECC-CCCEEEEeeC
Confidence 9999999887765432111 11 1234457888889999999999998 6777777653
No 479
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.84 E-value=2.9e-06 Score=88.31 Aligned_cols=281 Identities=9% Similarity=0.001 Sum_probs=166.1
Q ss_pred cCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCC---------eEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCccc
Q 008820 261 GGGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHK---------VMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPL 331 (552)
Q Consensus 261 s~~~l~s~s~dg~I~iwd~~~~~~~~~~~~h~~~---------v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~ 331 (552)
.+..++.++.++.|..+|..+|+.+.++...... ...+++. + ..++.++.|+.|..+|..+++.....
T Consensus 67 ~~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~--~-~~v~~~t~dg~l~AlD~~TG~~~W~~ 143 (582)
T 1flg_A 67 SDGVIYVTASYSRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIY--G-DKVFFGTLDASVVALNKNTGKVVWKK 143 (582)
T ss_dssp ETTEEEEEETTTEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEE--T-TEEEEEETTTEEEEEESSSCCEEEEE
T ss_pred ECCEEEEEcCCCCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEEE--C-CEEEEEeCCCEEEEEECCCCCEEeee
Confidence 4666666666445999999999999988654321 0122231 2 35677888999999999988765443
Q ss_pred cccccCC--CceeeeEEEEe-eCCC-EEEEeeC------CCcEEEEECCCCceeEEecCCCCCe----------------
Q 008820 332 KKWNEEK--DWRYSGIHALT-TSGR-YLYTGSG------DRTIKAWSLLDGTLSCTMSGHKSAV---------------- 385 (552)
Q Consensus 332 ~~~~~~~--~~~~~~~~~~~-~~~~-~l~sgs~------dg~i~iwd~~~~~~~~~~~~h~~~v---------------- 385 (552)
....... .....++..-. .+++ .+++++. +|.|+.+|..+|+.+.........+
T Consensus 144 ~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~~~~~~~~~p~~~~~~~~~g~~g~ 223 (582)
T 1flg_A 144 KFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMRPFVEGHMGRLNGKDSTVTGDVKA 223 (582)
T ss_dssp ECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEEESSTTCEEEETTEEEEESSCTTC
T ss_pred cCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEeecCCCccccccccCccccccccccc
Confidence 3221100 00111111100 1123 6666653 7899999999999988764321000
Q ss_pred -------------------------EEEEEe--CCEEEEEeC--------------------C----CcEEEEECCCCce
Q 008820 386 -------------------------STLAVC--NGVLYSGSR--------------------D----GTIRLWSLSDHSL 414 (552)
Q Consensus 386 -------------------------~~l~~~--~~~l~s~~~--------------------d----g~i~iwd~~~~~~ 414 (552)
..++++ .++++.+.. | +.|..+|..+|+.
T Consensus 224 ~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~ 303 (582)
T 1flg_A 224 PSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEV 303 (582)
T ss_dssp TTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTTCCE
T ss_pred ccCCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCcccccCCCcccccCCcccceEEEEeCCCCCE
Confidence 124454 356666653 2 6899999999999
Q ss_pred eEEEecCCCC------ceEEE-EEEc-CCCC---EEEEEECCCcEEEEeCC--cceeeeeccc-------------ceE-
Q 008820 415 LTVLEEDSSG------AVSSV-LSLT-AVQH---TLVVSHESGSIKVWRND--KFMKSMQTHK-------------GSV- 467 (552)
Q Consensus 415 ~~~~~~~~~~------~~~~~-~~~s-~~~~---~l~~g~~dg~i~iwd~~--~~~~~~~~h~-------------~~v- 467 (552)
+..++..+.. ....+ .... .+|+ .++.++.+|.++++|.. +.+....... .++
T Consensus 304 ~W~~q~~~~d~wd~~~~~~p~l~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~ 383 (582)
T 1flg_A 304 KWFYQHTPNDAWDFSGNNELVLFDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNITWASHIDLKTGRPVE 383 (582)
T ss_dssp EEEEESSTTCCSCCCCCCCCEEEEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSSCCCSEEEECTTTCCEEE
T ss_pred EEEEeCCCCCcccccCCCCcEEEeeecCCCCEEEEEEEECCCceEEEEECCCCCEecccccccCccccccccccCCCEeE
Confidence 9988753211 11111 2222 4664 78889999999999953 3332222110 000
Q ss_pred ---------------------------------EEEEecCCEEEEEe---------------------------------
Q 008820 468 ---------------------------------FAVFLEGKWLFTGG--------------------------------- 481 (552)
Q Consensus 468 ---------------------------------~~v~~~~~~l~sgs--------------------------------- 481 (552)
.+++++...+++..
T Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~p~~~~ 463 (582)
T 1flg_A 384 REGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSAYLGMGFRIKRMYDD 463 (582)
T ss_dssp CTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEESCSS
T ss_pred ccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhcceeeecccccccCCCceeccceeecCCCCC
Confidence 01122222333221
Q ss_pred CCCeEEEEecCCCeeeeeeccCCCcccCcceEEEEEeCCeEEEEeCCCeEEEEEecCCcceeEEEecc
Q 008820 482 WDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQGKLFVGCADRTVKIALCNRQIPEIFSLLLH 549 (552)
Q Consensus 482 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~l~s~s~Dg~v~iw~~~~~~~~~~~~~gh 549 (552)
.+|.|..||+.+++............ . ..+...++.++.|+.||.++.||.+ +++.+.++...
T Consensus 464 ~~G~l~A~D~~tG~~~W~~~~~~~~~-~---g~~~tagglvf~g~~dg~l~A~D~~-tG~~lW~~~~~ 526 (582)
T 1flg_A 464 HVGSLRAMDPVSGKVVWEHKEHLPLW-A---GVLATAGNLVFTGTGDGYFKAFDAK-SGKELWKFQTG 526 (582)
T ss_dssp CSEEEEEECTTTCCEEEEEEESSCCC-S---CCEEETTTEEEEECTTSEEEEEETT-TCCEEEEEECS
T ss_pred CcceEEEEECCCCCEEEEecCCCCCc-c---cceEeCCCEEEEECCCCcEEEEECC-CCCEEEEecCC
Confidence 36889999999998876654432111 1 1233347888899999999999987 67777776543
No 480
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.83 E-value=5.3e-06 Score=86.22 Aligned_cols=242 Identities=16% Similarity=0.114 Sum_probs=149.3
Q ss_pred EEEcCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCC----CeEE-EEEecCCCCEEEEEcC------CCcEEEEeCCCCC
Q 008820 258 LAVGGGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDH----KVMA-VVYVDEDQPLCISGDS------GGGIFVWSFSFPL 326 (552)
Q Consensus 258 l~~s~~~l~s~s~dg~I~iwd~~~~~~~~~~~~h~~----~v~~-v~~~~~~~~~l~s~~~------dg~i~vwd~~~~~ 326 (552)
+++.+..++.++.|+.|..+|..+|+.+........ .+.+ .... ++ .++.++. ++.|..+|..+++
T Consensus 111 ~~~~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~--~g-~v~vg~~~~~~~~~g~v~a~D~~tG~ 187 (571)
T 2ad6_A 111 LAYGAGQIVKKQANGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVA--KD-TVLMGCSGAELGVRGAVNAFDLKTGE 187 (571)
T ss_dssp CEEETTEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEE--TT-EEEEECBCGGGTCCCEEEEEETTTCC
T ss_pred cEEECCEEEEEeCCCEEEEEECCCCCEEEEecCCCCCccceeccCCEEE--CC-EEEEEecCCccCCCCEEEEEECCCCc
Confidence 455688899999999999999999999988764220 1211 1111 33 3444444 7999999999876
Q ss_pred CCccccccccC---------------------------------CCceeeeEEEEeeCCCEEEEeeCC------------
Q 008820 327 GHEPLKKWNEE---------------------------------KDWRYSGIHALTTSGRYLYTGSGD------------ 361 (552)
Q Consensus 327 ~~~~~~~~~~~---------------------------------~~~~~~~~~~~~~~~~~l~sgs~d------------ 361 (552)
........... .....-...++.+....++.++.+
T Consensus 188 ~~W~~~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd 267 (571)
T 2ad6_A 188 LKWRAFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGD 267 (571)
T ss_dssp EEEEEESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSC
T ss_pred EEEEEccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCC
Confidence 54433221100 000000112445555566666532
Q ss_pred ----CcEEEEECCCCceeEEecCC--C--------CCeEEEEEe-CC----EEEEEeCCCcEEEEECCCCceeEEEecCC
Q 008820 362 ----RTIKAWSLLDGTLSCTMSGH--K--------SAVSTLAVC-NG----VLYSGSRDGTIRLWSLSDHSLLTVLEEDS 422 (552)
Q Consensus 362 ----g~i~iwd~~~~~~~~~~~~h--~--------~~v~~l~~~-~~----~l~s~~~dg~i~iwd~~~~~~~~~~~~~~ 422 (552)
+.|..+|.++|+.+..++.. . .++. +... ++ .++.++.+|.++++|..+|+.+..+....
T Consensus 268 ~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l-~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~ 346 (571)
T 2ad6_A 268 NKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVL-TDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDP 346 (571)
T ss_dssp CTTTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESST
T ss_pred ceeEEEEEEEecCCCcEEEEecCCCCcccccccCCCCEE-EecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccC
Confidence 35999999999999887532 1 2221 1111 34 46788899999999999999988776432
Q ss_pred C-----------Cc-e-------------------------EEEEEEcCCCCEEEEEE----------------------
Q 008820 423 S-----------GA-V-------------------------SSVLSLTAVQHTLVVSH---------------------- 443 (552)
Q Consensus 423 ~-----------~~-~-------------------------~~~~~~s~~~~~l~~g~---------------------- 443 (552)
. +. + ....+++|+..++++.+
T Consensus 347 ~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g 426 (571)
T 2ad6_A 347 AVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVG 426 (571)
T ss_dssp TCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCC
T ss_pred CccccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCcccc
Confidence 0 00 0 01136777777777664
Q ss_pred ---------------CCCcEEEEeCCc--ceeeeecccceEE--EEEecCCEEEEEeCCCeEEEEecCCCeeeeeeccCC
Q 008820 444 ---------------ESGSIKVWRNDK--FMKSMQTHKGSVF--AVFLEGKWLFTGGWDKTVSVQELAGDEFEEDVIPTG 504 (552)
Q Consensus 444 ---------------~dg~i~iwd~~~--~~~~~~~h~~~v~--~v~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~ 504 (552)
.+|.|..||..+ .+..+... ..+. .+...+..++.++.||.|+.||.++++....+....
T Consensus 427 ~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~-~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~~ 505 (571)
T 2ad6_A 427 ATLAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEK-FAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNFKMPS 505 (571)
T ss_dssp EEEEEEECTTSTTSCCCEEEEEECTTTCCEEEEEEES-SCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSS
T ss_pred ccceeccCccccCCCCCCeEEEEECCCCCEEEEecCC-CCccceeEEECCCEEEEEcCCCeEEEEECCCCCEEEEEeCCC
Confidence 246788888653 33333221 1111 123357788889999999999999998887766543
No 481
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=98.82 E-value=3.9e-10 Score=106.81 Aligned_cols=83 Identities=10% Similarity=0.091 Sum_probs=54.7
Q ss_pred ccccccchhhhhhhhhhCC-CchHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHhhccc
Q 008820 69 YGSDVWPVACILLSLLIGE-QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQCLNF 147 (552)
Q Consensus 69 ~~sDv~SlG~~l~~lltg~-pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ 147 (552)
.++|||||||+||||+||+ ||...+.........+... ...... .........++.+++.+||+.
T Consensus 181 ~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~------~~~~~~--------~~~~~~~~~~l~~li~~~l~~ 246 (286)
T 3uqc_A 181 PQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAERDTA------GQPIEP--------ADIDRDIPFQISAVAARSVQG 246 (286)
T ss_dssp HHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEECCBCTT------SCBCCH--------HHHCTTSCHHHHHHHHHHHCT
T ss_pred chhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHHHHHhc------cCCCCh--------hhcccCCCHHHHHHHHHHccc
Confidence 6999999999999999999 9977543311000000000 000000 111112334599999999999
Q ss_pred CCCCCcchhhHHHHHHhhh
Q 008820 148 DPGCRPLLTNVWKCIRELI 166 (552)
Q Consensus 148 ~p~~R~~~~~~~~~l~~~~ 166 (552)
+|.+| ++.++.+.+.++.
T Consensus 247 dP~~R-s~~el~~~L~~~~ 264 (286)
T 3uqc_A 247 DGGIR-SASTLLNLMQQAT 264 (286)
T ss_dssp TSSCC-CHHHHHHHHHHHH
T ss_pred CCccC-CHHHHHHHHHHHh
Confidence 99999 9999999988765
No 482
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.82 E-value=3.9e-06 Score=87.28 Aligned_cols=269 Identities=14% Similarity=0.071 Sum_probs=160.2
Q ss_pred EEEeeCCCeEEEEEeecCccc---------eEEEEEcCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCC----CeE-EEE
Q 008820 234 LVNGLSKGNVKFKDLQGHRDC---------VTGLAVGGGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDH----KVM-AVV 299 (552)
Q Consensus 234 ~~~~~~~~~~~~~~l~~H~~~---------V~~l~~s~~~l~s~s~dg~I~iwd~~~~~~~~~~~~h~~----~v~-~v~ 299 (552)
+..........+|++...... -..+++.+..++.++.|+.|..+|.++|+.+........ .+. +..
T Consensus 80 v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~~t~dg~l~AlD~~TG~~~W~~~~~~~~~~~~~~~sP~ 159 (582)
T 1flg_A 80 LFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGTLDASVVALNKNTGKVVWKKKFADHGAGYTMTGAPT 159 (582)
T ss_dssp EEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEEEETTTEEEEEESSSCCEEEEEECSCGGGTCBCCSCCE
T ss_pred EEEEECCCCcEEEEEcCCCCcccccccccCCCccEEECCEEEEEeCCCEEEEEECCCCCEEeeecCCCCCcCcccccCCE
Confidence 333333444557877654321 133455678888999999999999999999988764321 111 111
Q ss_pred EecC---CCCEEEEEc------CCCcEEEEeCCCCCCCcccccccc-----------------------C----------
Q 008820 300 YVDE---DQPLCISGD------SGGGIFVWSFSFPLGHEPLKKWNE-----------------------E---------- 337 (552)
Q Consensus 300 ~~~~---~~~~l~s~~------~dg~i~vwd~~~~~~~~~~~~~~~-----------------------~---------- 337 (552)
...+ +...+++++ .++.|..+|..+++.......... .
T Consensus 160 v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~~~~~~~~~p~~~~~~~~~g~~g~~~w~~~~~~~~g~~~~ 239 (582)
T 1flg_A 160 IVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMRPFVEGHMGRLNGKDSTVTGDVKAPSWPDDRNSPTGKVES 239 (582)
T ss_dssp EEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEEESSTTCEEEETTEEEEESSCTTCTTSCBCTTSTTSBCGG
T ss_pred EeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEeecCCCccccccccCcccccccccccccCCCccccccccccc
Confidence 1221 122455554 378999999988765432211000 0
Q ss_pred ---CCceeeeEEEEeeCCCEEEEeeC--------------------C----CcEEEEECCCCceeEEecC--CC------
Q 008820 338 ---KDWRYSGIHALTTSGRYLYTGSG--------------------D----RTIKAWSLLDGTLSCTMSG--HK------ 382 (552)
Q Consensus 338 ---~~~~~~~~~~~~~~~~~l~sgs~--------------------d----g~i~iwd~~~~~~~~~~~~--h~------ 382 (552)
.....-...++.+....++.++. | +.|..+|.++|+.+..++. |.
T Consensus 240 ~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~ 319 (582)
T 1flg_A 240 WSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSG 319 (582)
T ss_dssp GGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCC
T ss_pred cccCCccccCCceEcCCCCEEEEeCCCCCcccCcccccCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccC
Confidence 00000012245556666666653 2 6899999999999998753 32
Q ss_pred --CCeEEEEE--eCC----EEEEEeCCCcEEEEECCCCceeEEEecCCCC-----------ce-----------------
Q 008820 383 --SAVSTLAV--CNG----VLYSGSRDGTIRLWSLSDHSLLTVLEEDSSG-----------AV----------------- 426 (552)
Q Consensus 383 --~~v~~l~~--~~~----~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~-----------~~----------------- 426 (552)
.++. +.. .++ .++.++.+|.++++|..+|+.+..+...... ..
T Consensus 320 ~~~p~l-~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~ 398 (582)
T 1flg_A 320 NNELVL-FDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKH 398 (582)
T ss_dssp CCCCEE-EEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSS
T ss_pred CCCcEE-EeeecCCCCEEEEEEEECCCceEEEEECCCCCEecccccccCccccccccccCCCEeEccccCCccccccccC
Confidence 1222 222 122 6888999999999999999998777653200 00
Q ss_pred ---------------EEEEEEcCCCCEEEEEE---------------------------------CCCcEEEEeCCc--c
Q 008820 427 ---------------SSVLSLTAVQHTLVVSH---------------------------------ESGSIKVWRNDK--F 456 (552)
Q Consensus 427 ---------------~~~~~~s~~~~~l~~g~---------------------------------~dg~i~iwd~~~--~ 456 (552)
....+++|+..++++.. .+|.|..||..+ .
T Consensus 399 ~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~ 478 (582)
T 1flg_A 399 GKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKV 478 (582)
T ss_dssp CCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCCE
T ss_pred CCceEECcCCccccCCCCceECCCCCEEEEechhcceeeecccccccCCCceeccceeecCCCCCCcceEEEEECCCCCE
Confidence 00135566555555433 257788888653 3
Q ss_pred eeeeecccceEE--EEEecCCEEEEEeCCCeEEEEecCCCeeeeeeccCC
Q 008820 457 MKSMQTHKGSVF--AVFLEGKWLFTGGWDKTVSVQELAGDEFEEDVIPTG 504 (552)
Q Consensus 457 ~~~~~~h~~~v~--~v~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~ 504 (552)
+.....+. ++. .+...+..++.|+.||.++.||.++++....+....
T Consensus 479 ~W~~~~~~-~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW~~~~~~ 527 (582)
T 1flg_A 479 VWEHKEHL-PLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGS 527 (582)
T ss_dssp EEEEEESS-CCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSS
T ss_pred EEEecCCC-CCcccceEeCCCEEEEECCCCcEEEEECCCCCEEEEecCCC
Confidence 33332221 111 123367788889999999999999999888776543
No 483
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.80 E-value=2.8e-06 Score=77.08 Aligned_cols=187 Identities=14% Similarity=0.127 Sum_probs=131.4
Q ss_pred cCccc--eEEEEEc-CCEEEEEeCCC--cEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCC
Q 008820 250 GHRDC--VTGLAVG-GGFLFSSSFDK--SIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSF 324 (552)
Q Consensus 250 ~H~~~--V~~l~~s-~~~l~s~s~dg--~I~iwd~~~~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~ 324 (552)
.|... ...+.|+ +.++.+.+.+| .|+++|+++++.+..+..... .......+.++.+.+..-.++.+.++|..+
T Consensus 38 phd~~~ftqGL~~~~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~-~FgeGit~~g~~ly~ltw~~~~v~v~D~~t 116 (262)
T 3nol_A 38 PHDTKAFTEGFFYRNGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKR-YFGEGISDWKDKIVGLTWKNGLGFVWNIRN 116 (262)
T ss_dssp ECCTTCEEEEEEEETTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTT-CCEEEEEEETTEEEEEESSSSEEEEEETTT
T ss_pred cCCCCcccceEEEECCEEEEECCCCCCceEEEEECCCCcEEEEEecCCc-cceeEEEEeCCEEEEEEeeCCEEEEEECcc
Confidence 45433 4788898 66666666665 899999999999998875433 322222334566767777799999999987
Q ss_pred CCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCceeEEecCC--C---CCeEEEEEeCCEEEEEe
Q 008820 325 PLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGH--K---SAVSTLAVCNGVLYSGS 399 (552)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h--~---~~v~~l~~~~~~l~s~~ 399 (552)
.+....+.... .. ..++++++.|+....++.|.++|..+.+.+.++.-. . ..++.+.|.++.+++..
T Consensus 117 ~~~~~ti~~~~--eG------~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~~G~lyan~ 188 (262)
T 3nol_A 117 LRQVRSFNYDG--EG------WGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWVDGEIFANV 188 (262)
T ss_dssp CCEEEEEECSS--CC------CCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEETTEEEEEE
T ss_pred CcEEEEEECCC--Cc------eEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEECCEEEEEE
Confidence 66554444311 11 255678887777777888999999999988876532 2 33556788877666666
Q ss_pred -CCCcEEEEECCCCceeEEEecCC----------CCceEEEEEEcCCCCEEEEEECC
Q 008820 400 -RDGTIRLWSLSDHSLLTVLEEDS----------SGAVSSVLSLTAVQHTLVVSHES 445 (552)
Q Consensus 400 -~dg~i~iwd~~~~~~~~~~~~~~----------~~~~~~~~~~s~~~~~l~~g~~d 445 (552)
.++.|.+.|.++++.+..+.... ...+..-++++|+++.|++.+..
T Consensus 189 w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~ 245 (262)
T 3nol_A 189 WQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKL 245 (262)
T ss_dssp TTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEETT
T ss_pred ccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECCC
Confidence 58899999999999998887531 12234447999998888877654
No 484
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.79 E-value=8e-07 Score=80.62 Aligned_cols=181 Identities=15% Similarity=0.164 Sum_probs=128.8
Q ss_pred ceEEEEEc-CCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCcccc
Q 008820 254 CVTGLAVG-GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLK 332 (552)
Q Consensus 254 ~V~~l~~s-~~~l~s~s~dg~I~iwd~~~~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~ 332 (552)
-...+.|+ +.++.+.+.+|.|+++|+++++.+..+ -. .........+.++.+.+..-.++.+.++|..+.+....+.
T Consensus 56 ftqGL~~~~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~-~~~FgeGit~~g~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~ 133 (268)
T 3nok_A 56 FTQGLVFHQGHFFESTGHQGTLRQLSLESAQPVWME-RL-GNIFAEGLASDGERLYQLTWTEGLLFTWSGMPPQRERTTR 133 (268)
T ss_dssp CEEEEEEETTEEEEEETTTTEEEECCSSCSSCSEEE-EC-TTCCEEEEEECSSCEEEEESSSCEEEEEETTTTEEEEEEE
T ss_pred ccceEEEECCEEEEEcCCCCEEEEEECCCCcEEeEE-CC-CCcceeEEEEeCCEEEEEEccCCEEEEEECCcCcEEEEEe
Confidence 35788998 666777788899999999999988877 22 2333322233466777777789999999998765554444
Q ss_pred ccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCceeEEecC--CC---CCeEEEEEeCCEEEEEe-CCCcEEE
Q 008820 333 KWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSG--HK---SAVSTLAVCNGVLYSGS-RDGTIRL 406 (552)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~--h~---~~v~~l~~~~~~l~s~~-~dg~i~i 406 (552)
.. ... ..++++++.|+.+..++.|.++|..+.+.+.++.- +. ..++.+.|.++.+++.. .++.|.+
T Consensus 134 ~~--~eG------wGLt~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~dG~lyanvw~s~~I~v 205 (268)
T 3nok_A 134 YS--GEG------WGLCYWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECANGVIYANIWHSSDVLE 205 (268)
T ss_dssp CS--SCC------CCEEEETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEETTCSEEEE
T ss_pred CC--Cce------eEEecCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEeCCEEEEEECCCCeEEE
Confidence 31 111 25567888888777789999999999998887753 22 24577888877666666 5789999
Q ss_pred EECCCCceeEEEecC-----------CCCceEEEEEEcCCCCEEEEEEC
Q 008820 407 WSLSDHSLLTVLEED-----------SSGAVSSVLSLTAVQHTLVVSHE 444 (552)
Q Consensus 407 wd~~~~~~~~~~~~~-----------~~~~~~~~~~~s~~~~~l~~g~~ 444 (552)
.|.++++.+..+... ....+..-++++|+++.|++.+.
T Consensus 206 IDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK 254 (268)
T 3nok_A 206 IDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGK 254 (268)
T ss_dssp ECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEET
T ss_pred EeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCC
Confidence 999999998888643 12224444799998766666554
No 485
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.79 E-value=9.7e-06 Score=77.99 Aligned_cols=218 Identities=11% Similarity=0.096 Sum_probs=130.8
Q ss_pred eEEEEEc---CCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCccc
Q 008820 255 VTGLAVG---GGFLFSSSFDKSIHVWSLKDFSHVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPL 331 (552)
Q Consensus 255 V~~l~~s---~~~l~s~s~dg~I~iwd~~~~~~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~ 331 (552)
..+.+|+ +..+++...++.|..||..+++.. .+. ....+.++++.+++. ++++. . ..|.+||..++.... +
T Consensus 51 ~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~~-~~~~v~~i~~~~dg~-l~v~~-~-~gl~~~d~~~g~~~~-~ 124 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWFNILERELHELHLASGRKT-VHA-LPFMGSALAKISDSK-QLIAS-D-DGLFLRDTATGVLTL-H 124 (326)
T ss_dssp EEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEE-EEE-CSSCEEEEEEEETTE-EEEEE-T-TEEEEEETTTCCEEE-E
T ss_pred CcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEE-EEE-CCCcceEEEEeCCCe-EEEEE-C-CCEEEEECCCCcEEE-E
Confidence 4566776 456667777889999999887653 333 356799999999765 44433 3 449999987654221 1
Q ss_pred cccccCCCceeeeEEEEeeCCCEEEEeeC------CCcEEEEECCCCceeEEecCCCCCeEEEEEe-CC-EEE-EEeCCC
Q 008820 332 KKWNEEKDWRYSGIHALTTSGRYLYTGSG------DRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC-NG-VLY-SGSRDG 402 (552)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~l~sgs~------dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~-~~-~l~-s~~~dg 402 (552)
.............-..++++|+.+++... .+.|..+| +++... +..+......++|+ ++ .++ +.+.++
T Consensus 125 ~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~-~~~~~~~~~~i~~s~dg~~lyv~~~~~~ 201 (326)
T 2ghs_A 125 AELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTK-LFADISIPNSICFSPDGTTGYFVDTKVN 201 (326)
T ss_dssp ECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEE-EEEEESSEEEEEECTTSCEEEEEETTTC
T ss_pred eeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEE-eeCCCcccCCeEEcCCCCEEEEEECCCC
Confidence 11111111122233467788886555432 24566666 455433 22233456789998 44 454 445678
Q ss_pred cEEEEECC--CC-cee--EEEe-cCCCCceEEEEEEcCCCCEEEEEECCCcEEEEeCC-cceeeeecccceEEEEEe---
Q 008820 403 TIRLWSLS--DH-SLL--TVLE-EDSSGAVSSVLSLTAVQHTLVVSHESGSIKVWRND-KFMKSMQTHKGSVFAVFL--- 472 (552)
Q Consensus 403 ~i~iwd~~--~~-~~~--~~~~-~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~-~~~~~~~~h~~~v~~v~~--- 472 (552)
.|.+||+. ++ +.. ..+. ..........++++++|++.++...++.|.+||.. +.+..+..+...+.+++|
T Consensus 202 ~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~~g~~~~~i~~~~~~~~~~af~g~ 281 (326)
T 2ghs_A 202 RLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDTDGNHIARYEVPGKQTTCPAFIGP 281 (326)
T ss_dssp EEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECTTCCEEEEEECSCSBEEEEEEEST
T ss_pred EEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECCCCCEEEEEECCCCCcEEEEEecC
Confidence 99999986 55 321 1221 11111223346889999887777777899999964 345566666667888876
Q ss_pred cCCEEEEEe
Q 008820 473 EGKWLFTGG 481 (552)
Q Consensus 473 ~~~~l~sgs 481 (552)
+++.|+.++
T Consensus 282 d~~~L~vt~ 290 (326)
T 2ghs_A 282 DASRLLVTS 290 (326)
T ss_dssp TSCEEEEEE
T ss_pred CCCEEEEEe
Confidence 445555444
No 486
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.78 E-value=2.2e-06 Score=84.77 Aligned_cols=250 Identities=12% Similarity=0.071 Sum_probs=156.6
Q ss_pred CCCeEEEEEeecCccceEEEEEc--CCEEEEEe----------CCCcEEEEeCCCCeEEEEEeCC-------CCCeEEEE
Q 008820 239 SKGNVKFKDLQGHRDCVTGLAVG--GGFLFSSS----------FDKSIHVWSLKDFSHVHTFKGH-------DHKVMAVV 299 (552)
Q Consensus 239 ~~~~~~~~~l~~H~~~V~~l~~s--~~~l~s~s----------~dg~I~iwd~~~~~~~~~~~~h-------~~~v~~v~ 299 (552)
......+.++.--..+ .++++ +++++.+. .++.|.++|..+++.+.++.-. ......++
T Consensus 106 ~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~ 183 (426)
T 3c75_H 106 GSTGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNA 183 (426)
T ss_dssp TTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSE
T ss_pred CCCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEE
Confidence 3333445555544455 78998 77777775 4678999999999999887532 12346788
Q ss_pred EecCCCCEEEEEcC-CCcEEEEeCCCCCCCccccccccCCCceeeeEEEEeeCC-CEEEEeeCCCcEEEEECCCCceeEE
Q 008820 300 YVDEDQPLCISGDS-GGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSG-RYLYTGSGDRTIKAWSLLDGTLSCT 377 (552)
Q Consensus 300 ~~~~~~~~l~s~~~-dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~sgs~dg~i~iwd~~~~~~~~~ 377 (552)
++|++..++++... ++.|.+.|+.+.+....+... . ...+.+++ ..+++.+.||.+.+.+..+++....
T Consensus 184 ~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~---g------~~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~ 254 (426)
T 3c75_H 184 LTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVP---D------CYHIFPASPTVFYMNCRDGSLARVDFADGETKVT 254 (426)
T ss_dssp ECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECC---S------EEEEEEEETTEEEEEETTSSEEEEECCTTCCEEE
T ss_pred EcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcC---C------ceeeccCCCcEEEEEcCCCCEEEEECCCCcEEEE
Confidence 99988866665543 689999999876544333321 1 12334443 4667777889988888866655532
Q ss_pred ----ecCCCCCe-EEEEEe--CCEEEEEeCCCcEEEEECCCCcee--EEEecC--C-------CCceEEEEEEcCCCCEE
Q 008820 378 ----MSGHKSAV-STLAVC--NGVLYSGSRDGTIRLWSLSDHSLL--TVLEED--S-------SGAVSSVLSLTAVQHTL 439 (552)
Q Consensus 378 ----~~~h~~~v-~~l~~~--~~~l~s~~~dg~i~iwd~~~~~~~--~~~~~~--~-------~~~~~~~~~~s~~~~~l 439 (552)
+.....++ ..+.+. ++.++..+..+.+.+.|....... ..+... . ...... +.++++++.+
T Consensus 255 ~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~-va~s~dg~rl 333 (426)
T 3c75_H 255 NTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQ-TAYHRQSDRI 333 (426)
T ss_dssp ECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSC-EEEEGGGTEE
T ss_pred eeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCcee-eEEcCCCCEE
Confidence 21112221 123455 346666677899999998765422 111110 0 000111 5789998887
Q ss_pred EEEEC----------CCcEEEEeCC--cceeeeeccc-ceEEEEEecCC-EEEEEe-CCCeEEEEecCCCeeeeee
Q 008820 440 VVSHE----------SGSIKVWRND--KFMKSMQTHK-GSVFAVFLEGK-WLFTGG-WDKTVSVQELAGDEFEEDV 500 (552)
Q Consensus 440 ~~g~~----------dg~i~iwd~~--~~~~~~~~h~-~~v~~v~~~~~-~l~sgs-~dg~i~iwd~~~~~~~~~~ 500 (552)
++... ++.|.++|.. +.+..+.... ..-..+++|++ ++++.. .++.|.++|+.+.+....+
T Consensus 334 yVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg~~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~kvv~tI 409 (426)
T 3c75_H 334 YLLVDQRDEWKHKAASRFVVVLNAETGERINKIELGHEIDSINVSQDAEPLLYALSAGTQTLHIYDAATGEELRSV 409 (426)
T ss_dssp EEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEEEECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred EEEecccccccccCCCCEEEEEECCCCeEEEEEECCCCcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCCEEEEe
Confidence 77643 3579999965 3455554322 22233445898 888888 5899999999998877665
No 487
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.75 E-value=8.2e-07 Score=86.29 Aligned_cols=257 Identities=12% Similarity=0.066 Sum_probs=147.9
Q ss_pred cceEEEEEc--CCEEEEEe--CCCcEEEEeCCCCeEEEEEe-------CCCCCeEEEEEecCCCCEEEEEcC-----CCc
Q 008820 253 DCVTGLAVG--GGFLFSSS--FDKSIHVWSLKDFSHVHTFK-------GHDHKVMAVVYVDEDQPLCISGDS-----GGG 316 (552)
Q Consensus 253 ~~V~~l~~s--~~~l~s~s--~dg~I~iwd~~~~~~~~~~~-------~h~~~v~~v~~~~~~~~~l~s~~~-----dg~ 316 (552)
..+..++++ |+.+++.. .++.++||.+.+++.. .+. .|-..+..+++.+++. ++++-.. ++.
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~~-~~p~~~~~~~~~~~~p~gv~~d~~g~-L~v~D~g~~~~~~~~ 94 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGLI-PFPPQSGNAIITFDTVLGIKSDGNGI-VWMLDNGNQSKSVPK 94 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEEE-ESCCCCSSCCCCCSCEEEEEECSSSE-EEEEECHHHHTSCCE
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCee-cCCCcccCcccceeEeeEEEEcCCCc-EEEEcCCCCcCCCCe
Confidence 678899998 77877764 2343566665555532 221 2456899999988754 4444333 578
Q ss_pred EEEEeCCCCCCCcccccccc-CCCceeeeEEEEeeCCC-EEEEee---CCCcEEEEECCCCceeEEecCCCCCeE-EEEE
Q 008820 317 IFVWSFSFPLGHEPLKKWNE-EKDWRYSGIHALTTSGR-YLYTGS---GDRTIKAWSLLDGTLSCTMSGHKSAVS-TLAV 390 (552)
Q Consensus 317 i~vwd~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~l~sgs---~dg~i~iwd~~~~~~~~~~~~h~~~v~-~l~~ 390 (552)
|.+||+.+++....+..... ........-..+++++. .+++.. .++.|.+||+.+++....+.+|..... ...+
T Consensus 95 i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~ 174 (343)
T 2qe8_A 95 LVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDL 174 (343)
T ss_dssp EEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCC
T ss_pred EEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccccce
Confidence 99999987653222211100 00001112235666544 445544 678999999998888777765532211 0222
Q ss_pred e-CC-EEEEEeCCCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEEEECCC-cEEEEeCCcc----------e
Q 008820 391 C-NG-VLYSGSRDGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSHESG-SIKVWRNDKF----------M 457 (552)
Q Consensus 391 ~-~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg-~i~iwd~~~~----------~ 457 (552)
. ++ .+.+.+.|++++.|.. .... ++++|+++.|+++..++ .++.++.... .
T Consensus 175 ~~~g~~~~~~~~~g~~~~~~~---------------~~~g-ia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 238 (343)
T 2qe8_A 175 VIDGVPVQIGQPDGTVIRPHL---------------GVNG-IVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELG 238 (343)
T ss_dssp EETTEECBEECTTSCEECCCC---------------CEEE-EEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHH
T ss_pred eECCEEEEeccCCCceeceec---------------ccce-eEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhh
Confidence 2 34 5666778888766531 1233 69999999998887766 5555542110 0
Q ss_pred e--eeecccceE--EEEEecCCEEEEEeCCCeEEEEecCCCeeeeeeccCCCcccCcceEEEEEeC-CeEE-EEeCCCeE
Q 008820 458 K--SMQTHKGSV--FAVFLEGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYWQ-GKLF-VGCADRTV 531 (552)
Q Consensus 458 ~--~~~~h~~~v--~~v~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~~-~~l~-s~s~Dg~v 531 (552)
. ...++.... .+++.+|..+++...++.|.+||..+++....... +......++++.+ +.|+ +.+..+.+
T Consensus 239 ~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~----~~~~~p~~va~~~~g~l~v~~~~~~~~ 314 (343)
T 2qe8_A 239 SKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITSADRAYKLLVTD----EKLSWTDSFNFGSDGYLYFDCNQLHHS 314 (343)
T ss_dssp TTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTEEEEEEEC----GGGSCEEEEEECTTSCEEEEECCGGGS
T ss_pred cceEecccCCCCceEEECCCCCEEEEccCCCeEEEEECCCCCEEEEEEC----CceecCCeeEECCCCcEEEEeCccccc
Confidence 0 111232233 33444888888888899999999955544332221 1134478889974 4444 44433333
No 488
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.74 E-value=4.1e-06 Score=75.35 Aligned_cols=186 Identities=15% Similarity=0.093 Sum_probs=130.1
Q ss_pred cCc--cceEEEEEc-CCEEEEEeCC--CcEEEEeCCCCeEEEEEeCCCCCe-EEEEEecCCCCEEEEEcCCCcEEEEeCC
Q 008820 250 GHR--DCVTGLAVG-GGFLFSSSFD--KSIHVWSLKDFSHVHTFKGHDHKV-MAVVYVDEDQPLCISGDSGGGIFVWSFS 323 (552)
Q Consensus 250 ~H~--~~V~~l~~s-~~~l~s~s~d--g~I~iwd~~~~~~~~~~~~h~~~v-~~v~~~~~~~~~l~s~~~dg~i~vwd~~ 323 (552)
.|. .-...+.|+ +.++.+.+.+ ..|+++|+++++.+..+....... ..+++ .++.+....-.++.+.++|..
T Consensus 16 phd~~~ftqGL~~~~~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~--~~~~ly~ltw~~~~v~v~D~~ 93 (243)
T 3mbr_X 16 PHDTTAFTEGLFYLRGHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVA--WRDRLIQLTWRNHEGFVYDLA 93 (243)
T ss_dssp ECCTTCCEEEEEEETTEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEE--ETTEEEEEESSSSEEEEEETT
T ss_pred CCCCccccccEEEECCEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEE--eCCEEEEEEeeCCEEEEEECC
Confidence 454 346789999 5555555554 489999999999999886543321 23443 356677777789999999998
Q ss_pred CCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCceeEEecCCC-----CCeEEEEEeCCEEEEE
Q 008820 324 FPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHK-----SAVSTLAVCNGVLYSG 398 (552)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~-----~~v~~l~~~~~~l~s~ 398 (552)
+.+....+... ... ..++++++.|+.+..++.|.++|..+.+.+.++.-.. ..++.+.+.++.+++.
T Consensus 94 tl~~~~ti~~~--~~G------wglt~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~~G~lyan 165 (243)
T 3mbr_X 94 TLTPRARFRYP--GEG------WALTSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWVNGELLAN 165 (243)
T ss_dssp TTEEEEEEECS--SCC------CEEEECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEE
T ss_pred cCcEEEEEeCC--CCc------eEEeeCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEeCCEEEEE
Confidence 76544444321 111 2556788877777778999999999999888775321 3457788887766666
Q ss_pred e-CCCcEEEEECCCCceeEEEecC-----------CCCceEEEEEEcCCCCEEEEEECC
Q 008820 399 S-RDGTIRLWSLSDHSLLTVLEED-----------SSGAVSSVLSLTAVQHTLVVSHES 445 (552)
Q Consensus 399 ~-~dg~i~iwd~~~~~~~~~~~~~-----------~~~~~~~~~~~s~~~~~l~~g~~d 445 (552)
. .+..|.+.|.++++.+..+... ....+..-++++|+++.|++.+..
T Consensus 166 vw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK~ 224 (243)
T 3mbr_X 166 VWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGKR 224 (243)
T ss_dssp ETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEETT
T ss_pred ECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECCC
Confidence 5 5789999999999999888733 122344447999988777776653
No 489
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.73 E-value=9.7e-06 Score=77.99 Aligned_cols=213 Identities=10% Similarity=0.001 Sum_probs=126.9
Q ss_pred CeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCc
Q 008820 294 KVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGT 373 (552)
Q Consensus 294 ~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~ 373 (552)
-..+.+|+|+++.++++...++.|..||..++... .+.... .. ....+.++++++++ +.+ .|.+||..+++
T Consensus 50 ~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~----~~~~~~--~v-~~i~~~~dg~l~v~-~~~-gl~~~d~~~g~ 120 (326)
T 2ghs_A 50 LGEGPTFDPASGTAWWFNILERELHELHLASGRKT----VHALPF--MG-SALAKISDSKQLIA-SDD-GLFLRDTATGV 120 (326)
T ss_dssp BEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEE----EEECSS--CE-EEEEEEETTEEEEE-ETT-EEEEEETTTCC
T ss_pred CCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEE----EEECCC--cc-eEEEEeCCCeEEEE-ECC-CEEEEECCCCc
Confidence 34677899988888888888999999998764321 111111 11 22356778876665 444 49999998887
Q ss_pred eeEEecC----CCCCeEEEEEe-CCEEEEEeC-------CCcEEEEECCCCceeEEEecCCCCceEEEEEEcCCCCEEEE
Q 008820 374 LSCTMSG----HKSAVSTLAVC-NGVLYSGSR-------DGTIRLWSLSDHSLLTVLEEDSSGAVSSVLSLTAVQHTLVV 441 (552)
Q Consensus 374 ~~~~~~~----h~~~v~~l~~~-~~~l~s~~~-------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~ 441 (552)
....... ....+.+++++ ++.++.++. .+.|..+| +++....... ... ...++++++++.++.
T Consensus 121 ~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~~--~~~-~~~i~~s~dg~~lyv 195 (326)
T 2ghs_A 121 LTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFAD--ISI-PNSICFSPDGTTGYF 195 (326)
T ss_dssp EEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEEE--ESS-EEEEEECTTSCEEEE
T ss_pred EEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeCC--Ccc-cCCeEEcCCCCEEEE
Confidence 6433221 12357888898 444444432 24566666 4543322221 112 233689999987765
Q ss_pred EE-CCCcEEEEeCC--cc--e---eee---ecccceEEEEEe--cCCEEEEEeCCCeEEEEecCCCeeeeeeccCCCccc
Q 008820 442 SH-ESGSIKVWRND--KF--M---KSM---QTHKGSVFAVFL--EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPC 508 (552)
Q Consensus 442 g~-~dg~i~iwd~~--~~--~---~~~---~~h~~~v~~v~~--~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~ 508 (552)
+. .++.|.+||.. .. + ..+ .........+.+ +|.+.++...++.|.+||.. ++....+...
T Consensus 196 ~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~~-g~~~~~i~~~----- 269 (326)
T 2ghs_A 196 VDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDTD-GNHIARYEVP----- 269 (326)
T ss_dssp EETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECTT-CCEEEEEECS-----
T ss_pred EECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECCC-CCEEEEEECC-----
Confidence 54 56889999963 21 1 112 222344556665 67777766667899999985 4333333221
Q ss_pred CcceEEEEEe-CC--eEEEEe
Q 008820 509 GSVITALLYW-QG--KLFVGC 526 (552)
Q Consensus 509 ~~~v~~l~~~-~~--~l~s~s 526 (552)
...+.+++|+ ++ .|++++
T Consensus 270 ~~~~~~~af~g~d~~~L~vt~ 290 (326)
T 2ghs_A 270 GKQTTCPAFIGPDASRLLVTS 290 (326)
T ss_dssp CSBEEEEEEESTTSCEEEEEE
T ss_pred CCCcEEEEEecCCCCEEEEEe
Confidence 3358899997 43 455544
No 490
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.72 E-value=7.3e-06 Score=75.29 Aligned_cols=192 Identities=15% Similarity=0.066 Sum_probs=133.4
Q ss_pred ceEEEEEcC-CEEEEEeC---CCcEEEEeCCCCeEEEEEeCCCC-CeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCC
Q 008820 254 CVTGLAVGG-GFLFSSSF---DKSIHVWSLKDFSHVHTFKGHDH-KVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGH 328 (552)
Q Consensus 254 ~V~~l~~s~-~~l~s~s~---dg~I~iwd~~~~~~~~~~~~h~~-~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~ 328 (552)
....++|++ ..|+.++. ++.|++.|+.+++.+.++.-... ....+++. ++.+.++.-.++.+.++|..+.+..
T Consensus 22 f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~~~v~viD~~t~~v~ 99 (266)
T 2iwa_A 22 FTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWLKNIGFIYDRRTLSNI 99 (266)
T ss_dssp CEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEETTCSEEEEEETTTTEEE
T ss_pred CcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEecCCEEEEEECCCCcEE
Confidence 367899983 56665543 57999999999999988763222 22345554 5567777778999999999876544
Q ss_pred ccccccccCCCceeeeEEEEeeCCCEEEEeeCCCcEEEEECCCCceeEEecCCC-----CCeEEEEEeCCEEEEEe-CCC
Q 008820 329 EPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRTIKAWSLLDGTLSCTMSGHK-----SAVSTLAVCNGVLYSGS-RDG 402 (552)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~-----~~v~~l~~~~~~l~s~~-~dg 402 (552)
..+..- .... ..++++++.++++..++.|.++|..+.+.+..+.-.. ...+.+.|.++.+++.. .++
T Consensus 100 ~~i~~g-~~~g------~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~dg~lyvn~~~~~ 172 (266)
T 2iwa_A 100 KNFTHQ-MKDG------WGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYINGEVWANIWQTD 172 (266)
T ss_dssp EEEECC-SSSC------CEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEETTSS
T ss_pred EEEECC-CCCe------EEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEECCEEEEecCCCC
Confidence 433221 1111 2477888877777778999999999998888775321 23678888877666655 578
Q ss_pred cEEEEECCCCceeEEEecCC-----------CCceEEEEEEcCCCCEEEE-EECCCcEEEEeCC
Q 008820 403 TIRLWSLSDHSLLTVLEEDS-----------SGAVSSVLSLTAVQHTLVV-SHESGSIKVWRND 454 (552)
Q Consensus 403 ~i~iwd~~~~~~~~~~~~~~-----------~~~~~~~~~~s~~~~~l~~-g~~dg~i~iwd~~ 454 (552)
.|.+.|..+++.+..+.... ......-++++++++.+++ +...+.++..++.
T Consensus 173 ~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~ 236 (266)
T 2iwa_A 173 CIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLH 236 (266)
T ss_dssp EEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEE
T ss_pred eEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEe
Confidence 99999999999998887531 1123344799999875555 4467788888754
No 491
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.71 E-value=0.00015 Score=78.81 Aligned_cols=280 Identities=9% Similarity=0.121 Sum_probs=167.0
Q ss_pred ccceEEEEEc-CCEEEEEeCCCcEEEEeCCCCeEEEEEeC-------CCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCC
Q 008820 252 RDCVTGLAVG-GGFLFSSSFDKSIHVWSLKDFSHVHTFKG-------HDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFS 323 (552)
Q Consensus 252 ~~~V~~l~~s-~~~l~s~s~dg~I~iwd~~~~~~~~~~~~-------h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~ 323 (552)
...|.++... ...+..|+.++-+.+||..+++....... ....|.++...+++. +..|+.+ -|.+||..
T Consensus 214 ~~~i~~i~~d~~g~lwigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~--lWigt~~-Gl~~~~~~ 290 (795)
T 4a2l_A 214 TKQIQAILQQSPTRIWVATEGAGLFLINPKTKEIKNYLHSPSNPKSISSNYIRSLAMDSQNR--LWIGTFN-DLNIYHEG 290 (795)
T ss_dssp CCCEEEEEEEETTEEEEEEBSSCEEEEETTTTEEEEECCCTTCTTSCSCSBEEEEEECTTSC--EEEEESS-CEEEEETT
T ss_pred CCeeEEEEEcCCCCEEEEECCCCeEEEeCCCCeEEEeecCCCCccccCCCeEEEEEEcCCCC--EEEEeCC-hhheEcCC
Confidence 4568888877 66667777655599999887665433221 135688888766554 3445555 68889876
Q ss_pred CCCCCccccccccCCCceeeeEEEEeeCCC-EEEEeeCCCcEEEEECCCCceeEEec------CCCCCeEEEEEe-CCEE
Q 008820 324 FPLGHEPLKKWNEEKDWRYSGIHALTTSGR-YLYTGSGDRTIKAWSLLDGTLSCTMS------GHKSAVSTLAVC-NGVL 395 (552)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~sgs~dg~i~iwd~~~~~~~~~~~------~h~~~v~~l~~~-~~~l 395 (552)
+....................+.++..|.+ .+..|+.++-|..|+..++....... -....|.++... ++.|
T Consensus 291 ~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g~l 370 (795)
T 4a2l_A 291 TDSFASYSSNPVENGSLSQRSVRSIFMDSQGGMWLGTYFGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDKDKNL 370 (795)
T ss_dssp TTEEEEECCCTTSTTSCSSSCEEEEEECTTSCEEEEESSSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEECTTSCE
T ss_pred CCeEEEEecCCCCCCCCCCCcEEEEEEeCCcCEEEEECCCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEECCCCCE
Confidence 542211110000001111123455555433 57778887889999876554322111 023568898887 6688
Q ss_pred EEEeCCCcEEEEECCCCceeEEEecC-------CCCceEEEEEEcCCCCEEEEEECCCcEEEEeCCc-ceeeee-----c
Q 008820 396 YSGSRDGTIRLWSLSDHSLLTVLEED-------SSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDK-FMKSMQ-----T 462 (552)
Q Consensus 396 ~s~~~dg~i~iwd~~~~~~~~~~~~~-------~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~~-~~~~~~-----~ 462 (552)
..|+.++-|..||..+++........ ....+.+ +...++++.|.+|+.++-|..||..+ ....+. .
T Consensus 371 WiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~-i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l 449 (795)
T 4a2l_A 371 WIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKA-VYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQL 449 (795)
T ss_dssp EEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEE-EEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCC
T ss_pred EEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEE-EEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCc
Confidence 88999988999998876644322111 1123333 56677787577788877899999653 233332 2
Q ss_pred ccceEEEEEec-CCEEEEEeCCCeEEEEecCCCeeeeeeccC-CCcccCcceEEEEEe-CCeEEEEeCCCeEEEEEec
Q 008820 463 HKGSVFAVFLE-GKWLFTGGWDKTVSVQELAGDEFEEDVIPT-GAIPCGSVITALLYW-QGKLFVGCADRTVKIALCN 537 (552)
Q Consensus 463 h~~~v~~v~~~-~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~-~~~~~~~~v~~l~~~-~~~l~s~s~Dg~v~iw~~~ 537 (552)
+...|.++..+ ...|..|+. +.+.+||..+++........ ........|.++... ++.+..|+. +-|..|+..
T Consensus 450 ~~~~v~~i~~d~~g~lwigt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~-~Gl~~~~~~ 525 (795)
T 4a2l_A 450 VNENVYAILPDGEGNLWLGTL-SALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE-EGLSVFKQE 525 (795)
T ss_dssp SCSCEEEEEECSSSCEEEEES-SCEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEES-SCEEEEEEE
T ss_pred CCCeeEEEEECCCCCEEEEec-CceeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCEEEEeC-CceEEEeCC
Confidence 34578888773 234555555 45888998877554332210 001113568888877 567888887 557778765
No 492
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.71 E-value=9.9e-06 Score=84.16 Aligned_cols=267 Identities=14% Similarity=0.115 Sum_probs=157.9
Q ss_pred eEEEeeC-CCeEEEEEeecCccc-----------eEEEEE--cCCE----EEEEeCCCcEEEEeCCCCeEEEEEeCCCC-
Q 008820 233 DLVNGLS-KGNVKFKDLQGHRDC-----------VTGLAV--GGGF----LFSSSFDKSIHVWSLKDFSHVHTFKGHDH- 293 (552)
Q Consensus 233 ~~~~~~~-~~~~~~~~l~~H~~~-----------V~~l~~--s~~~----l~s~s~dg~I~iwd~~~~~~~~~~~~h~~- 293 (552)
.+..... .....+|++...... ...+++ .+.. ++.++.|+.|..+|..+|+.+........
T Consensus 74 ~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG~~~W~~~~~~~~ 153 (599)
T 1w6s_A 74 NTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAETGETVWKVENSDIK 153 (599)
T ss_dssp CEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETTTCCEEEEEECCCGG
T ss_pred EEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCCEEEEEECCCCCEEEeecCCCCC
Confidence 3444433 344557776543221 133566 5444 88888999999999999999988764321
Q ss_pred ---CeEE-EEEecCCCCEEEEEc------CCCcEEEEeCCCCCCCccccccccCC-------------------------
Q 008820 294 ---KVMA-VVYVDEDQPLCISGD------SGGGIFVWSFSFPLGHEPLKKWNEEK------------------------- 338 (552)
Q Consensus 294 ---~v~~-v~~~~~~~~~l~s~~------~dg~i~vwd~~~~~~~~~~~~~~~~~------------------------- 338 (552)
.+.+ .... ++ .++.++ .+|.|+.+|..+++............
T Consensus 154 ~~~~~~ssP~v~--~g-~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~~g~~~~g~~tw 230 (599)
T 1w6s_A 154 VGSTLTIAPYVV--KD-KVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPHYGQKGLGTGTW 230 (599)
T ss_dssp GTCBCCSCCEEE--TT-EEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCTTHHHHTS
T ss_pred ccceeecCCEEE--CC-EEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCCccccccccccccccccccccccccccC
Confidence 1111 1111 33 344444 38999999999876543322211000
Q ss_pred --------CceeeeEEEEeeCCCEEEEeeCC----------------CcEEEEECCCCceeEEecCCC----------CC
Q 008820 339 --------DWRYSGIHALTTSGRYLYTGSGD----------------RTIKAWSLLDGTLSCTMSGHK----------SA 384 (552)
Q Consensus 339 --------~~~~~~~~~~~~~~~~l~sgs~d----------------g~i~iwd~~~~~~~~~~~~h~----------~~ 384 (552)
....-...++.+....++.++.+ +.|..+|.++|+.+..++... .+
T Consensus 231 ~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p 310 (599)
T 1w6s_A 231 EGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVM 310 (599)
T ss_dssp STTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTCSSCCCCCCCC
T ss_pred CCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCCCccccccCCCcc
Confidence 00000112445566677777655 379999999999998875422 12
Q ss_pred eEEEEEe--CC----EEEEEeCCCcEEEEECCCCceeEEEecCC-----------CCc----------------------
Q 008820 385 VSTLAVC--NG----VLYSGSRDGTIRLWSLSDHSLLTVLEEDS-----------SGA---------------------- 425 (552)
Q Consensus 385 v~~l~~~--~~----~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-----------~~~---------------------- 425 (552)
+. +... ++ .++.++.+|.++++|.++|+.+....... .+.
T Consensus 311 ~l-~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~P~~ 389 (599)
T 1w6s_A 311 ML-SEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANKLDDTVNVFKSVDLKTGQPVRDPEYGTRMDHLAKDICPSA 389 (599)
T ss_dssp EE-EEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCCEEECGGGCCCTTCCEEEESSCT
T ss_pred EE-EeccccCCcEEEEEEEECCCcEEEEEECCCCCEeecccccCCcccccccccCCCceeeccccCCCCCCCccEeccCc
Confidence 22 2221 23 57778899999999999999988765321 000
Q ss_pred ----eEEEEEEcCCCCEEEEEE---------------------------------------CCCcEEEEeCCcceeeeec
Q 008820 426 ----VSSVLSLTAVQHTLVVSH---------------------------------------ESGSIKVWRNDKFMKSMQT 462 (552)
Q Consensus 426 ----~~~~~~~s~~~~~l~~g~---------------------------------------~dg~i~iwd~~~~~~~~~~ 462 (552)
....++++|+..++++.. .+|.|..||..+....++.
T Consensus 390 ~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~p~~~~~~~~~~G~l~A~D~~tG~~~W~~ 469 (599)
T 1w6s_A 390 MGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMYPGPKGDRQNYEGLGQIKAYNAITGDYKWEK 469 (599)
T ss_dssp TCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSBTTTTBCCEEEEEECTTTCCEEEEE
T ss_pred ccccCCCCccCCCCCCEEEEeccccceeeecccccccCCcceecccceeccCCcCCcccCCCcCeEEEEECCCCCEEeEe
Confidence 001135667666665532 2356777775433222211
Q ss_pred -ccceEE--EEEecCCEEEEEeCCCeEEEEecCCCeeeeeeccC
Q 008820 463 -HKGSVF--AVFLEGKWLFTGGWDKTVSVQELAGDEFEEDVIPT 503 (552)
Q Consensus 463 -h~~~v~--~v~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~ 503 (552)
+..+.. .+...+..++.++.||.++.||.++++........
T Consensus 470 ~~~~~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~~lW~~~l~ 513 (599)
T 1w6s_A 470 MERFAVWGGTMATAGDLVFYGTLDGYLKARDSDTGDLLWKFKIP 513 (599)
T ss_dssp EESSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECS
T ss_pred cCCCCccCcceEecCCEEEEECCCCeEEEEECCCCCEEEEeeCC
Confidence 111111 13346788888999999999999999988876544
No 493
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.67 E-value=2.3e-06 Score=83.14 Aligned_cols=245 Identities=11% Similarity=0.036 Sum_probs=150.5
Q ss_pred CCCeEEEEEeecCccceEEEEEc--CCEEEEEe----------CCCcEEEEeCCCCeEEEEEeCC-------CCCeEEEE
Q 008820 239 SKGNVKFKDLQGHRDCVTGLAVG--GGFLFSSS----------FDKSIHVWSLKDFSHVHTFKGH-------DHKVMAVV 299 (552)
Q Consensus 239 ~~~~~~~~~l~~H~~~V~~l~~s--~~~l~s~s----------~dg~I~iwd~~~~~~~~~~~~h-------~~~v~~v~ 299 (552)
.+....+.++..-..+ .+.++ +++++.+. .+++|.+||+.+++.+.++..+ ......++
T Consensus 53 ~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia 130 (368)
T 1mda_H 53 AGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIG 130 (368)
T ss_dssp TTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEE
T ss_pred CCCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEE
Confidence 3444445556544456 69998 77777775 3788999999999999998644 12356889
Q ss_pred EecCCCCEEEEEcC-CCcEEE--EeCCCCCCCccccccccCCCceeeeEEEEeeCCC-EEEEeeCCCcEEEEECCC----
Q 008820 300 YVDEDQPLCISGDS-GGGIFV--WSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGR-YLYTGSGDRTIKAWSLLD---- 371 (552)
Q Consensus 300 ~~~~~~~~l~s~~~-dg~i~v--wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~sgs~dg~i~iwd~~~---- 371 (552)
++|++..++++... +..+.+ +|..+ +....... +..+.++++ .+++.+.||.+.+.|+.+
T Consensus 131 ~SpDGk~lyVan~~~~~~v~V~~iD~~t------v~~i~v~~------~~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~ 198 (368)
T 1mda_H 131 NCASSACLLFFLFGSSAAAGLSVPGASD------DQLTKSAS------CFHIHPGAAATHYLGSCPASLAASDLAAAPAA 198 (368)
T ss_dssp ECTTSSCEEEEECSSSCEEEEEETTTEE------EEEEECSS------CCCCEEEETTEEECCCCTTSCEEEECCSSCCC
T ss_pred EcCCCCEEEEEccCCCCeEEEEEEchhh------ceEEECCC------ceEEccCCCeEEEEEcCCCCEEEEECcccccc
Confidence 99998877666544 467888 88875 11111110 012334443 566777889999999876
Q ss_pred -CceeEE----ecCCCCCeEEEEEe-CCEEEEEeCCCcEEEEECCCCc--eeEEEecCC-----CCceE---EEEEEcCC
Q 008820 372 -GTLSCT----MSGHKSAVSTLAVC-NGVLYSGSRDGTIRLWSLSDHS--LLTVLEEDS-----SGAVS---SVLSLTAV 435 (552)
Q Consensus 372 -~~~~~~----~~~h~~~v~~l~~~-~~~l~s~~~dg~i~iwd~~~~~--~~~~~~~~~-----~~~~~---~~~~~s~~ 435 (552)
++.... +.-...+. ... ++.++..+. +.+.+.|..+.. .+..+.... .+... ..+.++++
T Consensus 199 ~~~v~~~~t~~i~vg~~P~---~~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~d 274 (368)
T 1mda_H 199 AGIVGAQCTGAQNCSSQAA---QANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKN 274 (368)
T ss_dssp CEECCCCSCTTSCBCSCCE---EETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETT
T ss_pred CCeEEEEeeeeeeCCCCcc---ccccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCC
Confidence 443311 11122333 233 456666666 999999997543 222221110 00000 11479999
Q ss_pred CCEEEEEEC-C--------CcEEEEeCCc--ceeeeecccceEEEEE--ecCC-EEEEEe-CCCeEEEEecCCCeeeeee
Q 008820 436 QHTLVVSHE-S--------GSIKVWRNDK--FMKSMQTHKGSVFAVF--LEGK-WLFTGG-WDKTVSVQELAGDEFEEDV 500 (552)
Q Consensus 436 ~~~l~~g~~-d--------g~i~iwd~~~--~~~~~~~h~~~v~~v~--~~~~-~l~sgs-~dg~i~iwd~~~~~~~~~~ 500 (552)
++.++++.. + +.+.++|..+ .+..+.... ....+. +||+ .+++.. .++.|.++|+.+.+....+
T Consensus 275 g~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~-~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv~~I 353 (368)
T 1mda_H 275 TDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGH-DSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSV 353 (368)
T ss_dssp TTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEE-EECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEEEC
T ss_pred CCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCC-CcceEEECCCCCEEEEEccCCCCeEEEEECCCCcEEEEE
Confidence 998887643 2 3566999653 445554332 344444 4887 566666 5999999999998877665
Q ss_pred cc
Q 008820 501 IP 502 (552)
Q Consensus 501 ~~ 502 (552)
..
T Consensus 354 ~v 355 (368)
T 1mda_H 354 EL 355 (368)
T ss_dssp CC
T ss_pred EC
Confidence 43
No 494
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.67 E-value=2.1e-06 Score=81.86 Aligned_cols=228 Identities=14% Similarity=0.167 Sum_probs=133.7
Q ss_pred EEEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCccccccccCCCceeeeEEEEeeCCCEEEEeeCCCc
Q 008820 284 HVHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGSGDRT 363 (552)
Q Consensus 284 ~~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~dg~ 363 (552)
.+..+..........+|+++++.++++...++.|..|+.. +. . ..+..... .....++.++|+++++...++.
T Consensus 36 ~~~~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~-g~-~---~~~~~~~~--~~~gl~~d~dG~l~v~~~~~~~ 108 (305)
T 3dr2_A 36 RLLTLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRED-GT-V---DVLLDATA--FTNGNAVDAQQRLVHCEHGRRA 108 (305)
T ss_dssp CCEEEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEETT-SC-E---EEEEESCS--CEEEEEECTTSCEEEEETTTTE
T ss_pred ceEEEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeCC-CC-E---EEEeCCCC--ccceeeECCCCCEEEEECCCCE
Confidence 3444555556778899999888788999999999999874 22 1 11111111 1223467788886666556678
Q ss_pred EEEEECCCCceeEEec---C-CCCCeEEEEEe-CCEEEE-----EeC-------------CCcEEEEECCCCceeEEEec
Q 008820 364 IKAWSLLDGTLSCTMS---G-HKSAVSTLAVC-NGVLYS-----GSR-------------DGTIRLWSLSDHSLLTVLEE 420 (552)
Q Consensus 364 i~iwd~~~~~~~~~~~---~-h~~~v~~l~~~-~~~l~s-----~~~-------------dg~i~iwd~~~~~~~~~~~~ 420 (552)
|..||.. ++...... + ....+.+++++ ++.++. |.. .+.|..+|..+++..... .
T Consensus 109 v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~ 186 (305)
T 3dr2_A 109 ITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-D 186 (305)
T ss_dssp EEEECTT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-E
T ss_pred EEEECCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe-c
Confidence 9999985 55432221 1 11346678888 454444 322 356888888777654433 1
Q ss_pred CCCCceEEEEEEcCCCCEEEEEECC------CcEEEEeCCcc-e---eee-ecccceEEEEE--ecCCEEEEEeCCCeEE
Q 008820 421 DSSGAVSSVLSLTAVQHTLVVSHES------GSIKVWRNDKF-M---KSM-QTHKGSVFAVF--LEGKWLFTGGWDKTVS 487 (552)
Q Consensus 421 ~~~~~~~~~~~~s~~~~~l~~g~~d------g~i~iwd~~~~-~---~~~-~~h~~~v~~v~--~~~~~l~sgs~dg~i~ 487 (552)
...... ++++|+++.|+++... +.|++|+.... + ..+ .........+. .+|+ |.+++.+ .|.
T Consensus 187 --~~~p~g-l~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~-lwv~~~~-gv~ 261 (305)
T 3dr2_A 187 --LDHPNG-LAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGW-LWSSSGT-GVC 261 (305)
T ss_dssp --ESSEEE-EEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSC-EEECCSS-EEE
T ss_pred --CCCCcc-eEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCC-EEEecCC-cEE
Confidence 122233 6899999988887765 68999985421 1 111 11111222333 4677 4444444 599
Q ss_pred EEecCCCeeeeeeccCCCcccCcceEEEEEeC--CeEEEEeCCCeEE
Q 008820 488 VQELAGDEFEEDVIPTGAIPCGSVITALLYWQ--GKLFVGCADRTVK 532 (552)
Q Consensus 488 iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~~--~~l~s~s~Dg~v~ 532 (552)
+|+..+. ....+... ..+.+++|++ +.|+.++.++..+
T Consensus 262 ~~~~~g~-~~~~~~~~------~~~~~~~f~~d~~~L~it~~~~l~~ 301 (305)
T 3dr2_A 262 VFDSDGQ-LLGHIPTP------GTASNCTFDQAQQRLFITGGPCLWM 301 (305)
T ss_dssp EECTTSC-EEEEEECS------SCCCEEEECTTSCEEEEEETTEEEE
T ss_pred EECCCCC-EEEEEECC------CceeEEEEeCCCCEEEEEcCCeEEE
Confidence 9998644 33333221 1367788874 3577777764333
No 495
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.60 E-value=0.00017 Score=66.90 Aligned_cols=231 Identities=14% Similarity=0.050 Sum_probs=136.4
Q ss_pred CEEEEEeCCCcEEEEeCCCCeE-----EEEEeCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCccccccccC
Q 008820 263 GFLFSSSFDKSIHVWSLKDFSH-----VHTFKGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLKKWNEE 337 (552)
Q Consensus 263 ~~l~s~s~dg~I~iwd~~~~~~-----~~~~~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~ 337 (552)
.+|+.+.. +.|+.++++.... ...+......+..++|.++++.++++-..++.|..++.+........ ...
T Consensus 2 ~~l~~~~~-~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~---~~~ 77 (267)
T 1npe_A 2 THLLFAQT-GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTII---RQD 77 (267)
T ss_dssp EEEEEEEE-EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEE---CTT
T ss_pred cEEEEEcC-CeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEE---ECC
Confidence 45555554 4788888765432 11222223457899999888878888888899999998754321111 111
Q ss_pred CCceeeeEEEEeeCCCEE-EEeeCCCcEEEEECCCCceeEEecCCCCCeEEEEEe--CCEEEEEeC---CCcEEEEECCC
Q 008820 338 KDWRYSGIHALTTSGRYL-YTGSGDRTIKAWSLLDGTLSCTMSGHKSAVSTLAVC--NGVLYSGSR---DGTIRLWSLSD 411 (552)
Q Consensus 338 ~~~~~~~~~~~~~~~~~l-~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~~~---dg~i~iwd~~~ 411 (552)
.....-.++.+++..+ ++-...+.|.+++.+.................++++ ++.|+.+.. .+.|..+++..
T Consensus 78 --~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg 155 (267)
T 1npe_A 78 --LGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDG 155 (267)
T ss_dssp --CCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTS
T ss_pred --CCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCC
Confidence 0111234667765544 444556889999986443322222222456889998 356665554 36888888764
Q ss_pred CceeEEEecCCCCceEEEEEEcCCCCEEEEEE-CCCcEEEEeCCcc-eeeeecccceEEEEEecCCEEEEEe-CCCeEEE
Q 008820 412 HSLLTVLEEDSSGAVSSVLSLTAVQHTLVVSH-ESGSIKVWRNDKF-MKSMQTHKGSVFAVFLEGKWLFTGG-WDKTVSV 488 (552)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~-~dg~i~iwd~~~~-~~~~~~h~~~v~~v~~~~~~l~sgs-~dg~i~i 488 (552)
. ....+....... ..-+++++++..|+.+. ..+.|..+|.... ...+.........+++++..|+.+. ..+.|..
T Consensus 156 ~-~~~~~~~~~~~~-P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~P~gi~~d~~~lyva~~~~~~v~~ 233 (267)
T 1npe_A 156 T-NRRILAQDNLGL-PNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEGLQYPFAVTSYGKNLYYTDWKTNSVIA 233 (267)
T ss_dssp C-CCEEEECTTCSC-EEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEECCCSEEEEEEETTEEEEEETTTTEEEE
T ss_pred C-CcEEEEECCCCC-CcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEecCCCCceEEEEeCCEEEEEECCCCeEEE
Confidence 3 333332221222 33378999877666555 4678999997532 1112111223356667667666665 4589999
Q ss_pred EecCCCeeeeeec
Q 008820 489 QELAGDEFEEDVI 501 (552)
Q Consensus 489 wd~~~~~~~~~~~ 501 (552)
+|..+++......
T Consensus 234 ~d~~~g~~~~~i~ 246 (267)
T 1npe_A 234 MDLAISKEMDTFH 246 (267)
T ss_dssp EETTTTEEEEEEC
T ss_pred EeCCCCCceEEEc
Confidence 9998887665543
No 496
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.59 E-value=0.00025 Score=77.14 Aligned_cols=275 Identities=12% Similarity=0.163 Sum_probs=165.4
Q ss_pred eEEEEEc-CCEEEEEeCCCcEEEEeCCCCeEEEEE-eCCCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCCCCcccc
Q 008820 255 VTGLAVG-GGFLFSSSFDKSIHVWSLKDFSHVHTF-KGHDHKVMAVVYVDEDQPLCISGDSGGGIFVWSFSFPLGHEPLK 332 (552)
Q Consensus 255 V~~l~~s-~~~l~s~s~dg~I~iwd~~~~~~~~~~-~~h~~~v~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~ 332 (552)
|.++... ...+..++.++-|..||..+++..... ..+...|.++...+++. +..++.++.+..||..+........
T Consensus 175 i~~i~~d~~g~lwigt~~~Gl~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~--lwigt~~~Gl~~~~~~~~~~~~~~~ 252 (795)
T 4a2l_A 175 IASTLYRQGDQIYIGTSTDGLYTYSITQKTFEKVIPILGTKQIQAILQQSPTR--IWVATEGAGLFLINPKTKEIKNYLH 252 (795)
T ss_dssp CEEEEEEETTEEEEEESSSCEEEEETTTCCEEECC----CCCEEEEEEEETTE--EEEEEBSSCEEEEETTTTEEEEECC
T ss_pred eEEEEECCCCCEEEEECCCCEEEEeCCCCeEEEecCCCCCCeeEEEEEcCCCC--EEEEECCCCeEEEeCCCCeEEEeec
Confidence 8888887 666777777656889998776654321 12346788887766443 4555555568889876532211110
Q ss_pred ccccCCCceeeeEEEEeeCC-CEEEEeeCCCcEEEEECCCCceeEEecC-------CCCCeEEEEEe-CCEEEEEeCCCc
Q 008820 333 KWNEEKDWRYSGIHALTTSG-RYLYTGSGDRTIKAWSLLDGTLSCTMSG-------HKSAVSTLAVC-NGVLYSGSRDGT 403 (552)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~-~~l~sgs~dg~i~iwd~~~~~~~~~~~~-------h~~~v~~l~~~-~~~l~s~~~dg~ 403 (552)
............+.++..+. ..+..|+.+ -|.+||..+++....... ....|.++... ++.+..|+.++-
T Consensus 253 ~~~~~~~l~~~~i~~i~~d~~g~lWigt~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lWigt~~~G 331 (795)
T 4a2l_A 253 SPSNPKSISSNYIRSLAMDSQNRLWIGTFN-DLNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQGGMWLGTYFGG 331 (795)
T ss_dssp CTTCTTSCSCSBEEEEEECTTSCEEEEESS-CEEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTSCEEEEESSSC
T ss_pred CCCCccccCCCeEEEEEEcCCCCEEEEeCC-hhheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCcCEEEEECCCC
Confidence 00000011112344555542 256666666 489999877765433211 23568899888 668888999899
Q ss_pred EEEEECCCCceeEEEecC------CCCceEEEEEEcCCCCEEEEEECCCcEEEEeCCc-ceeeee---------cccceE
Q 008820 404 IRLWSLSDHSLLTVLEED------SSGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDK-FMKSMQ---------THKGSV 467 (552)
Q Consensus 404 i~iwd~~~~~~~~~~~~~------~~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~~-~~~~~~---------~h~~~v 467 (552)
|..||..++... .+... ....+.+ +...++|+ |..|+.++-|..||..+ ....+. .....|
T Consensus 332 l~~~~~~~~~~~-~~~~~~~~~~l~~~~V~~-i~~d~~g~-lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v 408 (795)
T 4a2l_A 332 LNYYHPIRNRFK-NIRNIPYKNSLSDNVVSC-IVEDKDKN-LWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNI 408 (795)
T ss_dssp EEEECGGGGSSE-EECCCTTSSSCSCSSEEE-EEECTTSC-EEEEESSSCEEEECTTTCCEEEECCC------CCSCSCE
T ss_pred eEEeCCCcccce-EEcCCCCCCCCCCCeeEE-EEECCCCC-EEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccE
Confidence 999997665432 22211 1122333 45666665 66688887899998653 222221 123568
Q ss_pred EEEEe--cCCEEEEEeCCCeEEEEecCCCeeeeeeccCCCcccCcceEEEEEe-CCeEEEEeCCCeEEEEEec
Q 008820 468 FAVFL--EGKWLFTGGWDKTVSVQELAGDEFEEDVIPTGAIPCGSVITALLYW-QGKLFVGCADRTVKIALCN 537 (552)
Q Consensus 468 ~~v~~--~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~~-~~~l~s~s~Dg~v~iw~~~ 537 (552)
.++.. ++..|..|+.++-|..||..+++.......... .....|.++... ++.|..|+.+ -+.+|+..
T Consensus 409 ~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~-l~~~~v~~i~~d~~g~lwigt~~-Gl~~~~~~ 479 (795)
T 4a2l_A 409 KAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQ-LVNENVYAILPDGEGNLWLGTLS-ALVRFNPE 479 (795)
T ss_dssp EEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTTSC-CSCSCEEEEEECSSSCEEEEESS-CEEEEETT
T ss_pred EEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCC-cCCCeeEEEEECCCCCEEEEecC-ceeEEeCC
Confidence 88876 455478888888899999987765443221111 124568888877 5678888874 47777754
No 497
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=98.58 E-value=8.2e-09 Score=98.42 Aligned_cols=83 Identities=17% Similarity=0.209 Sum_probs=49.9
Q ss_pred ccccccccccchhhhhhhhhhCC-CchHHHhhhhhhccccCCCchhhhhhhhHHHHHHHHHHHhhhhcCccccHHHHHHh
Q 008820 65 FSVGYGSDVWPVACILLSLLIGE-QFTKELIDYIRCVSTKASDDNIACLGMYMAWMEKVTYLLENKFGSEFVSLQLMFCQ 143 (552)
Q Consensus 65 ~~~~~~sDv~SlG~~l~~lltg~-pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 143 (552)
..++.++|||||||+||||+||+ ||.......+........ .. .... .+.........++.+++.+
T Consensus 173 ~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~----~~-~~~~--------~~~~~~~~~~~~~~~li~~ 239 (299)
T 3m2w_A 173 EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRI----RM-GQYE--------FPNPEWSEVSEEVKMLIRN 239 (299)
T ss_dssp CGGGGHHHHHHHHHHHHHHHHSSCSCCC-------CCSCCSS----CT-TCCS--------SCHHHHTTSCHHHHHHHHH
T ss_pred ccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHHHHHHH----hh-cccc--------CCchhcccCCHHHHHHHHH
Confidence 45668999999999999999999 996543321100000000 00 0000 0111112234458999999
Q ss_pred hcccCCCCCcchhhHHH
Q 008820 144 CLNFDPGCRPLLTNVWK 160 (552)
Q Consensus 144 ~l~~~p~~R~~~~~~~~ 160 (552)
||+.+|.+||++.++.+
T Consensus 240 ~l~~dP~~Rps~~e~l~ 256 (299)
T 3m2w_A 240 LLKTEPTQRMTITEFMN 256 (299)
T ss_dssp HTCSSTTTSCCHHHHHT
T ss_pred HcccChhhCCCHHHHhc
Confidence 99999999999887765
No 498
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.56 E-value=0.00017 Score=70.67 Aligned_cols=190 Identities=14% Similarity=0.111 Sum_probs=119.7
Q ss_pred cCCCCEEEEEcCCCcEEEEeCCCC-CCCccccccc-----cCCCceeeeEEEEeeCCCEEEEeeCC------CcEEEEEC
Q 008820 302 DEDQPLCISGDSGGGIFVWSFSFP-LGHEPLKKWN-----EEKDWRYSGIHALTTSGRYLYTGSGD------RTIKAWSL 369 (552)
Q Consensus 302 ~~~~~~l~s~~~dg~i~vwd~~~~-~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~l~sgs~d------g~i~iwd~ 369 (552)
++...+++++-.++.|.++|+.+. ...+..+... ........--..+.|++ .++++..+ |.|.++|.
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~ 171 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDH 171 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECT
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEEC
Confidence 667778888999999999999643 2233333221 00011111122456888 77776655 78999999
Q ss_pred CCCceeEEecCCCC---CeEEEEEe--CCEEEEEe-------------------CCCcEEEEECCCCceeEEEecCCCCc
Q 008820 370 LDGTLSCTMSGHKS---AVSTLAVC--NGVLYSGS-------------------RDGTIRLWSLSDHSLLTVLEEDSSGA 425 (552)
Q Consensus 370 ~~~~~~~~~~~h~~---~v~~l~~~--~~~l~s~~-------------------~dg~i~iwd~~~~~~~~~~~~~~~~~ 425 (552)
++++.+.++..... --..+-|+ .+.+++.. .+.+|.+||+.+++.+.++.....+.
T Consensus 172 ~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~ 251 (462)
T 2ece_A 172 YSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENR 251 (462)
T ss_dssp TTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEE
T ss_pred CCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCC
Confidence 99999998863222 23456677 34666664 37899999999998888887642222
Q ss_pred eEEEE--EEcCCCCEEEEEEC------CCcEEEEeCCc----ceeee--e------------------cccceEEEEEec
Q 008820 426 VSSVL--SLTAVQHTLVVSHE------SGSIKVWRNDK----FMKSM--Q------------------THKGSVFAVFLE 473 (552)
Q Consensus 426 ~~~~~--~~s~~~~~l~~g~~------dg~i~iwd~~~----~~~~~--~------------------~h~~~v~~v~~~ 473 (552)
...-+ .++|+++++++++. +++|.+|.... ..+.+ . +....-..+++|
T Consensus 252 ~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~D 331 (462)
T 2ece_A 252 MALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLD 331 (462)
T ss_dssp EEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTT
T ss_pred ccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCC
Confidence 22223 35999999888874 56777654211 01110 0 011112335669
Q ss_pred CCEEEEEeC-CCeEEEEecC
Q 008820 474 GKWLFTGGW-DKTVSVQELA 492 (552)
Q Consensus 474 ~~~l~sgs~-dg~i~iwd~~ 492 (552)
|++|+++.. .+.|.+||+.
T Consensus 332 GrfLYVSnrg~d~VavfdV~ 351 (462)
T 2ece_A 332 DKFLYLSLWGIGEVRQYDIS 351 (462)
T ss_dssp SCEEEEEETTTTEEEEEECS
T ss_pred CCEEEEEeCCCCEEEEEEec
Confidence 999988876 6899999986
No 499
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.52 E-value=2.9e-05 Score=76.08 Aligned_cols=215 Identities=11% Similarity=0.098 Sum_probs=133.0
Q ss_pred CEEEEEeCCCcEEEEeCCCC----eEEEEEe-------CCCCCeEEEEEecCCCCEEEEEcCC------CcEEEEeCCCC
Q 008820 263 GFLFSSSFDKSIHVWSLKDF----SHVHTFK-------GHDHKVMAVVYVDEDQPLCISGDSG------GGIFVWSFSFP 325 (552)
Q Consensus 263 ~~l~s~s~dg~I~iwd~~~~----~~~~~~~-------~h~~~v~~v~~~~~~~~~l~s~~~d------g~i~vwd~~~~ 325 (552)
..++++..+++|.|+|+.+. +..+++. .....-..+...|++ +++++..+ |.|.+.|..+.
T Consensus 97 ~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG--i~Vs~~g~~~g~~~g~v~vlD~~T~ 174 (462)
T 2ece_A 97 FLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA--IYISALGNEEGEGPGGILMLDHYSF 174 (462)
T ss_dssp EEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC--EEEEEEEETTSCSCCEEEEECTTTC
T ss_pred EEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe--EEEEcCCCcCCCCCCeEEEEECCCC
Confidence 34566777899999999755 6777773 112245667778877 66666555 78999998876
Q ss_pred CCCccccccccCCCceeeeEEEEeeCCCEEEEee-------------------CCCcEEEEECCCCceeEEecCC--CCC
Q 008820 326 LGHEPLKKWNEEKDWRYSGIHALTTSGRYLYTGS-------------------GDRTIKAWSLLDGTLSCTMSGH--KSA 384 (552)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs-------------------~dg~i~iwd~~~~~~~~~~~~h--~~~ 384 (552)
+.......-........ -..++|+++.+++.. .+.+|.+||+.+++.+.++..- ...
T Consensus 175 ~v~~~~~~~~~~~~~~Y--d~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~ 252 (462)
T 2ece_A 175 EPLGKWEIDRGDQYLAY--DFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRM 252 (462)
T ss_dssp CEEEECCSBCTTCCCCC--CEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEE
T ss_pred eEEEEEccCCCCccccc--eEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCCc
Confidence 54433321111111111 135688999888874 3689999999999888887642 123
Q ss_pred eEEEEE--e-C-CEEEEEe------CCCcEEEEECCCCce--eEEEecCCC----------------CceEEEEEEcCCC
Q 008820 385 VSTLAV--C-N-GVLYSGS------RDGTIRLWSLSDHSL--LTVLEEDSS----------------GAVSSVLSLTAVQ 436 (552)
Q Consensus 385 v~~l~~--~-~-~~l~s~~------~dg~i~iwd~~~~~~--~~~~~~~~~----------------~~~~~~~~~s~~~ 436 (552)
...+.| + + .++++++ .+++|.+|....++. .+.+..... +....-+.+++||
T Consensus 253 P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DG 332 (462)
T 2ece_A 253 ALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDD 332 (462)
T ss_dssp EEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTS
T ss_pred cceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCCC
Confidence 456666 5 3 3555544 677888877655432 122111100 1122336899999
Q ss_pred CEEEEEEC-CCcEEEEeCC-----cceeeeecc----------------cceEEEEEecCCEEEEEe
Q 008820 437 HTLVVSHE-SGSIKVWRND-----KFMKSMQTH----------------KGSVFAVFLEGKWLFTGG 481 (552)
Q Consensus 437 ~~l~~g~~-dg~i~iwd~~-----~~~~~~~~h----------------~~~v~~v~~~~~~l~sgs 481 (552)
++|+++.. .+.|.+||+. +.+..+... ...-..+++||++|+++.
T Consensus 333 rfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 333 KFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp CEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred CEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 99988875 6899999964 222222211 123356677999999887
No 500
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.49 E-value=7.7e-05 Score=68.47 Aligned_cols=188 Identities=8% Similarity=-0.023 Sum_probs=124.4
Q ss_pred EEeeCCCEEEEeeC--CCcEEEEECCCCceeEEecCCC-CCeEEEEEeCCEEEEE-eCCCcEEEEECCCCceeEEEecCC
Q 008820 347 ALTTSGRYLYTGSG--DRTIKAWSLLDGTLSCTMSGHK-SAVSTLAVCNGVLYSG-SRDGTIRLWSLSDHSLLTVLEEDS 422 (552)
Q Consensus 347 ~~~~~~~~l~sgs~--dg~i~iwd~~~~~~~~~~~~h~-~~v~~l~~~~~~l~s~-~~dg~i~iwd~~~~~~~~~~~~~~ 422 (552)
.+++++..+++.+. ++.|.++|+.+++.+..+.-.. .....+++.++.++.+ -.++.+.++|..+.+.+.++...
T Consensus 27 ~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~~lyv~t~~~~~v~viD~~t~~v~~~i~~g- 105 (266)
T 2iwa_A 27 VYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLLNEKLYQVVWLKNIGFIYDRRTLSNIKNFTHQ- 105 (266)
T ss_dssp EECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEETTCSEEEEEETTTTEEEEEEECC-
T ss_pred EEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEeCCEEEEEEecCCEEEEEECCCCcEEEEEECC-
Confidence 56666544443332 5899999999999998875322 2334677777655544 46789999999999999988754
Q ss_pred CCceEEEEEEcCCCCEEEEEECCCcEEEEeCCc--ceeeeec--ccc---eEEEEEe-cCCEEEEEeCCCeEEEEecCCC
Q 008820 423 SGAVSSVLSLTAVQHTLVVSHESGSIKVWRNDK--FMKSMQT--HKG---SVFAVFL-EGKWLFTGGWDKTVSVQELAGD 494 (552)
Q Consensus 423 ~~~~~~~~~~s~~~~~l~~g~~dg~i~iwd~~~--~~~~~~~--h~~---~v~~v~~-~~~~l~sgs~dg~i~iwd~~~~ 494 (552)
.+.- ..+++|++.++++..++.|.++|..+ ....+.- +.. ..+.+.+ ++...+....++.|.+.|..++
T Consensus 106 ~~~g---~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~dg~lyvn~~~~~~V~vID~~tg 182 (266)
T 2iwa_A 106 MKDG---WGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYINGEVWANIWQTDCIARISAKDG 182 (266)
T ss_dssp SSSC---CEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEETTSSEEEEEETTTC
T ss_pred CCCe---EEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEECCEEEEecCCCCeEEEEECCCC
Confidence 1111 24556788777777889999999654 3333332 111 2456666 5644444445789999999998
Q ss_pred eeeeeeccCC--------CcccCcceEEEEEeCC--e-EEEEeCCCeEEEEEecC
Q 008820 495 EFEEDVIPTG--------AIPCGSVITALLYWQG--K-LFVGCADRTVKIALCNR 538 (552)
Q Consensus 495 ~~~~~~~~~~--------~~~~~~~v~~l~~~~~--~-l~s~s~Dg~v~iw~~~~ 538 (552)
+....+...+ ..+.....+.++++++ + ++++...+.|..-++..
T Consensus 183 ~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~ 237 (266)
T 2iwa_A 183 TLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHL 237 (266)
T ss_dssp CEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEE
T ss_pred cEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEec
Confidence 8766554321 0111245789999953 4 66677889999988863
Done!