Query 008823
Match_columns 552
No_of_seqs 477 out of 2607
Neff 7.2
Searched_HMMs 46136
Date Thu Mar 28 17:01:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008823.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/008823hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1378 Purple acid phosphatas 100.0 4.7E-82 1E-86 656.6 37.7 402 44-534 8-444 (452)
2 PLN02533 probable purple acid 100.0 8.3E-77 1.8E-81 635.7 45.3 361 81-529 39-420 (427)
3 cd00839 MPP_PAPs purple acid p 100.0 1.6E-43 3.4E-48 362.5 27.9 259 207-527 3-294 (294)
4 PTZ00422 glideosome-associated 100.0 8.3E-31 1.8E-35 273.4 24.8 240 208-531 26-333 (394)
5 cd07378 MPP_ACP5 Homo sapiens 100.0 9.4E-28 2E-32 243.8 23.1 234 209-511 1-274 (277)
6 PF09423 PhoD: PhoD-like phosp 99.9 2.5E-23 5.5E-28 226.0 29.1 298 94-409 5-381 (453)
7 cd07395 MPP_CSTP1 Homo sapiens 99.9 1.3E-23 2.8E-28 212.1 21.1 188 207-431 3-236 (262)
8 COG3540 PhoD Phosphodiesterase 99.9 7E-23 1.5E-27 212.7 18.2 293 94-408 45-421 (522)
9 KOG2679 Purple (tartrate-resis 99.9 9.5E-22 2.1E-26 191.0 21.2 194 207-431 42-275 (336)
10 cd07402 MPP_GpdQ Enterobacter 99.8 2.9E-20 6.3E-25 184.6 17.5 175 210-432 1-213 (240)
11 cd07396 MPP_Nbla03831 Homo sap 99.8 6.3E-19 1.4E-23 178.6 15.7 190 209-432 1-247 (267)
12 PRK11148 cyclic 3',5'-adenosin 99.8 9.1E-18 2E-22 170.8 20.5 183 207-431 13-225 (275)
13 cd07399 MPP_YvnB Bacillus subt 99.8 5.4E-18 1.2E-22 166.3 14.2 150 209-410 1-166 (214)
14 cd07401 MPP_TMEM62_N Homo sapi 99.8 1.8E-17 4E-22 166.9 16.9 180 211-411 2-216 (256)
15 PF00149 Metallophos: Calcineu 99.7 6.3E-17 1.4E-21 147.7 10.3 174 209-405 1-200 (200)
16 cd07383 MPP_Dcr2 Saccharomyces 99.6 3.3E-15 7.1E-20 144.7 13.2 150 208-409 2-180 (199)
17 PF14008 Metallophos_C: Iron/z 99.6 3E-15 6.4E-20 117.6 6.1 43 479-523 20-62 (62)
18 cd00842 MPP_ASMase acid sphing 99.6 1.7E-14 3.6E-19 148.3 13.3 175 213-408 42-264 (296)
19 cd07393 MPP_DR1119 Deinococcus 99.5 1.9E-13 4.2E-18 135.7 14.8 80 339-429 146-226 (232)
20 TIGR03729 acc_ester putative p 99.5 2.4E-13 5.2E-18 135.5 14.6 168 210-407 1-223 (239)
21 cd07400 MPP_YydB Bacillus subt 99.5 2.2E-13 4.7E-18 124.7 13.1 132 211-428 1-144 (144)
22 cd07404 MPP_MS158 Microscilla 99.4 1.7E-13 3.6E-18 128.8 6.8 144 211-408 1-152 (166)
23 cd07392 MPP_PAE1087 Pyrobaculu 99.4 2.8E-12 6E-17 122.0 13.5 160 211-406 1-174 (188)
24 cd08163 MPP_Cdc1 Saccharomyces 99.4 1.8E-12 3.8E-17 130.6 12.1 155 225-408 35-231 (257)
25 COG1409 Icc Predicted phosphoh 99.4 4.2E-12 9.2E-17 129.0 14.9 173 209-405 1-193 (301)
26 cd07385 MPP_YkuE_C Bacillus su 99.4 2.1E-12 4.5E-17 126.8 11.9 180 208-431 1-206 (223)
27 cd00838 MPP_superfamily metall 99.3 2.6E-11 5.6E-16 106.8 11.9 116 212-409 1-119 (131)
28 cd00840 MPP_Mre11_N Mre11 nucl 99.3 3.4E-11 7.3E-16 117.8 13.7 171 210-408 1-204 (223)
29 TIGR03767 P_acnes_RR metalloph 99.3 2.3E-11 5E-16 129.8 13.3 77 329-408 290-395 (496)
30 KOG1432 Predicted DNA repair e 99.3 2.8E-10 6.1E-15 115.1 20.0 195 207-431 52-330 (379)
31 PRK11340 phosphodiesterase Yae 99.3 3.9E-11 8.4E-16 122.0 12.5 72 208-303 49-125 (271)
32 cd07388 MPP_Tt1561 Thermus the 99.2 3.8E-10 8.3E-15 111.2 14.2 162 208-403 4-189 (224)
33 PF12850 Metallophos_2: Calcin 99.1 7E-10 1.5E-14 102.1 10.7 140 209-433 1-141 (156)
34 cd07379 MPP_239FB Homo sapiens 99.1 9.1E-10 2E-14 99.9 11.1 117 210-406 1-117 (135)
35 cd07397 MPP_DevT Myxococcus xa 99.0 4.3E-09 9.3E-14 104.2 15.3 184 209-426 1-231 (238)
36 COG1408 Predicted phosphohydro 99.0 3.1E-09 6.7E-14 108.4 13.9 162 208-413 44-232 (284)
37 cd00841 MPP_YfcE Escherichia c 98.9 1.3E-08 2.8E-13 94.3 13.4 131 210-431 1-132 (155)
38 PRK05340 UDP-2,3-diacylglucosa 98.9 9.3E-09 2E-13 102.7 10.5 76 209-303 1-83 (241)
39 TIGR00040 yfcE phosphoesterase 98.9 3.5E-08 7.5E-13 92.0 12.7 134 209-431 1-136 (158)
40 TIGR03768 RPA4764 metallophosp 98.8 4.8E-08 1E-12 103.8 14.6 66 339-405 332-411 (492)
41 cd07394 MPP_Vps29 Homo sapiens 98.8 1.5E-07 3.3E-12 89.7 16.9 132 210-431 1-136 (178)
42 cd08166 MPP_Cdc1_like_1 unchar 98.8 2.2E-08 4.7E-13 96.3 10.8 109 231-408 39-150 (195)
43 cd07389 MPP_PhoD Bacillus subt 98.8 3.2E-08 6.8E-13 97.7 12.3 176 210-408 1-207 (228)
44 cd08165 MPP_MPPE1 human MPPE1 98.8 4.3E-08 9.3E-13 91.5 11.3 110 231-425 35-147 (156)
45 cd07403 MPP_TTHA0053 Thermus t 98.7 3.8E-08 8.3E-13 88.9 8.8 49 359-408 58-106 (129)
46 TIGR01854 lipid_A_lpxH UDP-2,3 98.7 1.5E-07 3.3E-12 93.4 13.3 45 383-431 175-219 (231)
47 PRK09453 phosphodiesterase; Pr 98.7 5.8E-07 1.3E-11 85.8 16.0 148 209-432 1-149 (182)
48 cd07384 MPP_Cdc1_like Saccharo 98.7 1.6E-07 3.4E-12 89.0 11.8 32 360-409 119-150 (171)
49 COG2129 Predicted phosphoester 98.6 4.8E-07 1E-11 87.7 13.1 173 208-408 3-190 (226)
50 cd08164 MPP_Ted1 Saccharomyces 98.5 3E-07 6.5E-12 88.3 8.7 32 360-409 129-160 (193)
51 PF14582 Metallophos_3: Metall 98.5 5.2E-07 1.1E-11 87.3 9.7 181 208-407 5-220 (255)
52 cd07398 MPP_YbbF-LpxH Escheric 98.5 1.6E-06 3.5E-11 84.6 12.8 41 381-429 177-217 (217)
53 COG1768 Predicted phosphohydro 98.4 3.8E-06 8.3E-11 78.2 12.7 78 339-428 141-219 (230)
54 cd00845 MPP_UshA_N_like Escher 98.4 2.1E-06 4.5E-11 86.0 11.0 38 209-246 1-49 (252)
55 TIGR00583 mre11 DNA repair pro 98.3 5.4E-06 1.2E-10 88.7 12.0 40 208-247 3-55 (405)
56 cd07410 MPP_CpdB_N Escherichia 98.2 2.4E-05 5.2E-10 79.8 14.4 61 340-407 171-232 (277)
57 KOG3770 Acid sphingomyelinase 98.2 2.3E-05 4.9E-10 85.5 14.1 162 225-408 199-407 (577)
58 cd07406 MPP_CG11883_N Drosophi 98.2 1.2E-05 2.7E-10 81.1 11.4 68 341-431 157-225 (257)
59 COG0622 Predicted phosphoester 98.2 2.2E-05 4.9E-10 74.3 11.9 136 209-430 2-138 (172)
60 COG2908 Uncharacterized protei 98.1 4.2E-05 9E-10 75.1 13.1 41 382-430 176-216 (237)
61 cd07411 MPP_SoxB_N Thermus the 98.0 3.7E-05 8.1E-10 77.9 11.8 72 340-431 167-240 (264)
62 cd07408 MPP_SA0022_N Staphyloc 98.0 6.4E-05 1.4E-09 75.9 11.5 46 354-408 170-216 (257)
63 cd07412 MPP_YhcR_N Bacillus su 97.9 0.0001 2.3E-09 75.7 12.4 84 341-431 177-262 (288)
64 cd07424 MPP_PrpA_PrpB PrpA and 97.9 2.2E-05 4.9E-10 76.5 7.1 37 210-246 2-40 (207)
65 cd07390 MPP_AQ1575 Aquifex aeo 97.9 4.3E-05 9.3E-10 72.1 7.9 33 358-408 108-140 (168)
66 TIGR00619 sbcd exonuclease Sbc 97.8 4.9E-05 1.1E-09 76.6 8.4 73 209-303 1-88 (253)
67 cd07409 MPP_CD73_N CD73 ecto-5 97.8 0.00012 2.7E-09 74.8 11.0 53 339-406 166-219 (281)
68 PRK04036 DNA polymerase II sma 97.8 0.00023 5E-09 78.7 13.6 87 207-303 242-343 (504)
69 COG0420 SbcD DNA repair exonuc 97.8 5.3E-05 1.1E-09 81.1 8.0 75 209-305 1-90 (390)
70 cd07407 MPP_YHR202W_N Saccharo 97.7 0.00064 1.4E-08 69.6 14.8 73 342-432 177-251 (282)
71 cd07382 MPP_DR1281 Deinococcus 97.7 0.00085 1.8E-08 67.6 15.3 171 210-433 1-202 (255)
72 cd07425 MPP_Shelphs Shewanella 97.7 5.8E-05 1.3E-09 73.9 6.6 24 384-407 158-181 (208)
73 PRK09419 bifunctional 2',3'-cy 97.7 0.00038 8.1E-09 84.5 14.7 40 207-246 659-703 (1163)
74 cd00844 MPP_Dbr1_N Dbr1 RNA la 97.7 0.00037 8E-09 70.6 12.3 50 359-410 167-234 (262)
75 PRK10966 exonuclease subunit S 97.7 0.00012 2.5E-09 78.9 8.7 74 209-304 1-88 (407)
76 PRK11439 pphA serine/threonine 97.7 6.8E-05 1.5E-09 73.9 6.2 37 210-246 18-56 (218)
77 PRK09968 serine/threonine-spec 97.7 5.2E-05 1.1E-09 74.7 5.0 37 210-246 16-54 (218)
78 PHA02546 47 endonuclease subun 97.6 0.00016 3.5E-09 76.1 8.3 74 209-303 1-89 (340)
79 cd07405 MPP_UshA_N Escherichia 97.5 0.00075 1.6E-08 69.2 11.3 52 354-407 172-223 (285)
80 TIGR00282 metallophosphoestera 97.5 0.0055 1.2E-07 62.1 17.0 74 343-434 132-206 (266)
81 COG4186 Predicted phosphoester 97.4 0.0019 4E-08 59.3 11.1 38 359-404 110-147 (186)
82 COG0737 UshA 5'-nucleotidase/2 97.3 0.0022 4.8E-08 71.3 12.9 61 339-405 187-247 (517)
83 cd07380 MPP_CWF19_N Schizosacc 97.2 0.00087 1.9E-08 62.1 7.0 114 212-408 1-126 (150)
84 PRK09558 ushA bifunctional UDP 97.2 0.0031 6.8E-08 70.7 12.8 48 354-406 208-258 (551)
85 TIGR01530 nadN NAD pyrophospha 97.2 0.0035 7.6E-08 70.2 13.2 38 354-406 181-219 (550)
86 cd07391 MPP_PF1019 Pyrococcus 97.2 0.0008 1.7E-08 63.6 6.3 70 212-303 1-88 (172)
87 cd08162 MPP_PhoA_N Synechococc 96.9 0.0084 1.8E-07 62.4 11.3 39 354-406 206-245 (313)
88 PRK11907 bifunctional 2',3'-cy 96.8 0.021 4.6E-07 66.3 14.5 57 344-405 298-354 (814)
89 PHA02239 putative protein phos 96.7 0.0032 7E-08 62.8 6.8 70 209-303 1-73 (235)
90 cd07386 MPP_DNA_pol_II_small_a 96.6 0.0038 8.3E-08 62.4 6.2 82 212-304 2-95 (243)
91 TIGR00024 SbcD_rel_arch putati 96.5 0.0063 1.4E-07 60.3 7.2 70 209-303 15-102 (225)
92 PRK09418 bifunctional 2',3'-cy 96.4 0.049 1.1E-06 63.2 14.7 48 354-407 243-291 (780)
93 PRK09419 bifunctional 2',3'-cy 96.4 0.023 5.1E-07 69.2 12.8 49 354-407 233-282 (1163)
94 KOG3662 Cell division control 96.4 0.0093 2E-07 63.4 8.1 77 208-305 48-146 (410)
95 PRK09420 cpdB bifunctional 2', 96.4 0.027 5.8E-07 64.4 12.2 46 354-405 217-263 (649)
96 PRK00166 apaH diadenosine tetr 96.4 0.0049 1.1E-07 62.9 5.5 66 210-303 2-69 (275)
97 cd07423 MPP_PrpE Bacillus subt 96.4 0.0048 1E-07 61.4 5.3 68 210-303 2-80 (234)
98 TIGR01390 CycNucDiestase 2',3' 96.2 0.06 1.3E-06 61.3 13.5 46 354-405 194-240 (626)
99 PRK13625 bis(5'-nucleosyl)-tet 96.1 0.014 3.1E-07 58.5 7.1 67 210-302 2-78 (245)
100 KOG2863 RNA lariat debranching 96.0 0.013 2.8E-07 60.5 6.2 84 209-303 1-88 (456)
101 PF00041 fn3: Fibronectin type 95.9 0.033 7E-07 45.0 7.0 76 85-186 2-77 (85)
102 cd07413 MPP_PA3087 Pseudomonas 95.5 0.018 4E-07 56.8 5.0 67 211-303 1-76 (222)
103 cd07421 MPP_Rhilphs Rhilph pho 95.3 0.032 6.9E-07 57.2 5.9 37 210-246 3-46 (304)
104 cd07422 MPP_ApaH Escherichia c 95.2 0.022 4.8E-07 57.6 4.7 64 212-303 2-67 (257)
105 COG1311 HYS2 Archaeal DNA poly 95.2 0.13 2.7E-06 55.7 10.3 89 207-305 224-323 (481)
106 cd00144 MPP_PPP_family phospho 95.1 0.025 5.4E-07 55.4 4.5 35 212-246 1-36 (225)
107 COG1407 Predicted ICC-like pho 94.7 0.076 1.6E-06 52.6 6.7 73 209-303 20-110 (235)
108 TIGR00668 apaH bis(5'-nucleosy 94.3 0.059 1.3E-06 55.0 4.8 37 210-246 2-40 (279)
109 COG5555 Cytolysin, a secreted 93.9 0.071 1.5E-06 53.6 4.4 127 282-409 162-338 (392)
110 KOG4419 5' nucleotidase [Nucle 93.2 0.38 8.2E-06 53.2 9.0 57 339-406 212-270 (602)
111 COG1692 Calcineurin-like phosp 92.5 3.1 6.6E-05 41.5 13.3 176 209-431 1-202 (266)
112 KOG2310 DNA repair exonuclease 92.2 0.41 8.8E-06 52.3 7.5 42 207-248 12-66 (646)
113 cd07416 MPP_PP2B PP2B, metallo 91.6 0.27 5.9E-06 51.0 5.3 22 382-403 222-243 (305)
114 PF13277 YmdB: YmdB-like prote 91.4 3.6 7.9E-05 41.3 12.6 173 212-434 1-201 (253)
115 smart00156 PP2Ac Protein phosp 90.8 0.44 9.6E-06 48.6 5.7 37 210-246 29-66 (271)
116 cd07420 MPP_RdgC Drosophila me 90.7 0.47 1E-05 49.6 5.9 22 382-403 253-274 (321)
117 PF09587 PGA_cap: Bacterial ca 89.6 0.85 1.8E-05 45.7 6.7 65 339-409 168-232 (250)
118 cd07414 MPP_PP1_PPKL PP1, PPKL 89.1 0.58 1.2E-05 48.3 5.1 23 382-404 222-244 (293)
119 cd07415 MPP_PP2A_PP4_PP6 PP2A, 88.5 0.71 1.5E-05 47.4 5.2 23 382-404 214-236 (285)
120 PTZ00239 serine/threonine prot 88.4 0.68 1.5E-05 48.0 5.1 22 382-403 215-236 (303)
121 cd07418 MPP_PP7 PP7, metalloph 87.7 0.94 2E-05 48.3 5.7 34 210-246 67-105 (377)
122 PTZ00480 serine/threonine-prot 87.6 0.7 1.5E-05 48.2 4.6 23 382-404 231-253 (320)
123 KOG3325 Membrane coat complex 87.5 5.1 0.00011 36.9 9.4 39 383-429 97-135 (183)
124 cd07381 MPP_CapA CapA and rela 87.1 1.4 3E-05 43.8 6.2 61 342-408 162-222 (239)
125 cd00063 FN3 Fibronectin type 3 87.0 5.4 0.00012 31.2 8.7 21 165-185 57-77 (93)
126 PTZ00244 serine/threonine-prot 86.8 0.83 1.8E-05 47.2 4.6 22 382-403 224-245 (294)
127 smart00854 PGA_cap Bacterial c 85.2 2.3 5E-05 42.2 6.8 59 344-408 162-220 (239)
128 cd07387 MPP_PolD2_C PolD2 (DNA 84.3 2.1 4.6E-05 43.3 6.0 30 276-305 80-109 (257)
129 cd07419 MPP_Bsu1_C Arabidopsis 83.4 2.3 5E-05 44.3 6.0 21 382-402 242-262 (311)
130 cd07417 MPP_PP5_C PP5, C-termi 83.3 2.2 4.7E-05 44.6 5.7 22 382-403 233-254 (316)
131 KOG4221 Receptor mediating net 82.5 4.4 9.6E-05 48.5 8.3 33 168-200 677-712 (1381)
132 KOG0196 Tyrosine kinase, EPH ( 82.2 10 0.00022 43.9 10.7 37 165-201 498-537 (996)
133 smart00060 FN3 Fibronectin typ 79.8 11 0.00025 28.2 7.6 22 165-186 57-78 (83)
134 PF04042 DNA_pol_E_B: DNA poly 71.7 2.5 5.5E-05 40.8 2.1 82 211-304 1-92 (209)
135 KOG4258 Insulin/growth factor 70.7 18 0.00039 42.1 8.7 121 85-217 488-623 (1025)
136 KOG3513 Neural cell adhesion m 66.3 33 0.00071 41.2 9.9 77 85-186 822-898 (1051)
137 KOG4221 Receptor mediating net 53.7 1.3E+02 0.0029 36.7 11.9 36 165-200 574-612 (1381)
138 PF07353 Uroplakin_II: Uroplak 49.5 19 0.0004 33.5 3.4 35 168-202 105-141 (184)
139 PTZ00235 DNA polymerase epsilo 47.5 1.1E+02 0.0025 31.4 9.1 80 208-303 27-122 (291)
140 KOG3947 Phosphoesterases [Gene 42.3 45 0.00097 34.0 5.1 32 208-245 61-93 (305)
141 KOG0372 Serine/threonine speci 30.3 83 0.0018 31.6 4.7 34 211-246 45-81 (303)
142 KOG0374 Serine/threonine speci 28.6 51 0.0011 34.7 3.2 21 382-402 233-253 (331)
143 KOG0371 Serine/threonine prote 28.5 80 0.0017 32.0 4.3 34 211-246 62-98 (319)
144 cd02856 Glycogen_debranching_e 28.1 73 0.0016 27.1 3.6 23 162-184 44-66 (103)
145 cd02852 Isoamylase_N_term Isoa 28.1 74 0.0016 27.7 3.7 23 162-184 48-70 (119)
146 cd02853 MTHase_N_term Maltooli 26.1 79 0.0017 25.8 3.3 20 163-183 40-59 (85)
147 PF09294 Interfer-bind: Interf 26.1 65 0.0014 27.1 3.0 20 165-184 67-86 (106)
148 TIGR02855 spore_yabG sporulati 25.4 56 0.0012 33.3 2.6 52 341-405 114-166 (283)
149 PF05582 Peptidase_U57: YabG p 25.0 69 0.0015 32.8 3.2 52 341-405 115-167 (287)
150 cd02860 Pullulanase_N_term Pul 24.6 86 0.0019 26.4 3.4 24 162-185 46-69 (100)
No 1
>KOG1378 consensus Purple acid phosphatase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=4.7e-82 Score=656.64 Aligned_cols=402 Identities=40% Similarity=0.634 Sum_probs=346.6
Q ss_pred ccccCCCCCCCcccCCCCCCCCCCCCCCCCCCccccCCCCCCCceEEEeecCCCCeeEEEEEeCcccccCCCCCCCCCCC
Q 008823 44 IPTTLDGPFKPVTIPLDESFRGNAIDLPDTDPRVQRTVEGFEPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSV 123 (552)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~p~~~~~~~~~~P~qi~lt~~~~p~s~~V~W~T~~~~~g~~~~~~~p~~~ 123 (552)
.+..+.|+..+..+...|++.-....++...|++ .+.|||||||+++..++|+|+|.|.+..
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~peQvhlS~~~~~~~m~VswvT~~~~------------- 69 (452)
T KOG1378|consen 8 QSEINPKHTLHDINPLPGTLHLLSESEQLTFPSV-----VNSPEQVHLSFTDNLNEMRVSWVTGDGE------------- 69 (452)
T ss_pred eeeccCCCccccccccCcccccccccccccCccc-----CCCCCeEEEeccCCCCcEEEEEeCCCCC-------------
Confidence 4455667777888888888777777766666553 3569999999999888999999998752
Q ss_pred ccEEEEcccCCCCCeE-EEEEEEEEeeeeccCCccccccCeEEEEEeCCCCCCCEEEEEEecCCCCCccceeEEEcCCCC
Q 008823 124 VSVVRYGTRRSQLNRK-ATGRSLVYSQLYPFLGLQNYTSGIIHHVRLTGLKPDTLYHYQCGDPSIPAMSGTYCFRTMPDS 202 (552)
Q Consensus 124 ~~~V~yg~~~~~~~~~-~~g~~~~y~~~~~~~g~~~y~s~~~h~v~ltgL~P~T~Y~Yrvg~~~~~~~S~~~~F~T~p~~ 202 (552)
.++|+||+..+..... +.|.+..++..+.. .+|++|++|+|+|++|+|+|+||||||++. .||++|+|+|+|
T Consensus 70 ~~~V~Yg~~~~~~~~~~~~~~~~~~~~~y~~---~~~~sg~ih~~~~~~L~~~t~YyY~~Gs~~--~wS~~f~F~t~p-- 142 (452)
T KOG1378|consen 70 ENVVRYGEVKDKLDNSAARGMTEAWTDGYAN---GWRDSGYIHDAVMKNLEPNTRYYYQVGSDL--KWSEIFSFKTPP-- 142 (452)
T ss_pred CceEEEeecCCCccccccccceEEEeccccc---ccceeeeEeeeeecCCCCCceEEEEeCCCC--CcccceEeECCC--
Confidence 2789999876664433 35666666654432 347899999999999999999999999887 599999999998
Q ss_pred CCCCCCeEEEEEeccCCCCChHHHHHHHHHCC-CCEEEEcCccccccccccCCCCCCcccccCCCCCCcccch-HHHHHH
Q 008823 203 SSTSYPSRIAIVGDVGLTYNTTSTVSHMISNR-PDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQ-PRWDYW 280 (552)
Q Consensus 203 g~~~~p~rfaviGD~g~~~~~~~~l~~l~~~~-pDfvl~~GDl~Yad~~~~~G~~~d~~~~~~~~~~~~e~y~-~~wd~~ 280 (552)
+ +..+.+|+++||+|.+.....++.+..+.. +|+|||+|||+|++.+ + .+||+|
T Consensus 143 ~-~~~~~~~~i~GDlG~~~~~~s~~~~~~~~~k~d~vlhiGDlsYa~~~-----------------------~n~~wD~f 198 (452)
T KOG1378|consen 143 G-QDSPTRAAIFGDMGCTEPYTSTLRNQEENLKPDAVLHIGDLSYAMGY-----------------------SNWQWDEF 198 (452)
T ss_pred C-ccCceeEEEEccccccccccchHhHHhcccCCcEEEEecchhhcCCC-----------------------CccchHHH
Confidence 2 235899999999999988777887777664 9999999999998743 2 589999
Q ss_pred HHhhhhhhccCCeEEecCCccccccccchhhhhhhcccCCCCCCCCCCCceeEEeehh-------------------HHH
Q 008823 281 GRYMQPVLSKVPIMVVEGNHEYEEQAENRTFVAYTSRFAFPSKESGSLSKFYYSFNAG-------------------DQY 341 (552)
Q Consensus 281 ~~~l~~l~~~iP~~~v~GNHE~~~~~~~~~f~~y~~rF~~P~~~~~~~~~~yYsfd~G-------------------~Q~ 341 (552)
++++|++++.+|+|++.||||++..... .|.+|.+||.||.+++.+..++||||++| +|+
T Consensus 199 ~r~vEp~As~vPymv~~GNHE~d~~~~~-~F~~y~~Rf~mP~~~s~s~~~l~YSfd~G~vhfv~lsse~~~~~~~~~~QY 277 (452)
T KOG1378|consen 199 GRQVEPIASYVPYMVCSGNHEIDWPPQP-CFVPYSARFNMPGNSSESDSNLYYSFDVGGVHFVVLSTETYYNFLKGTAQY 277 (452)
T ss_pred HhhhhhhhccCceEEecccccccCCCcc-cccccceeeccCCCcCCCCCceeEEEeeccEEEEEEeccccccccccchHH
Confidence 9999999999999999999999865443 79999999999999888888999999998 999
Q ss_pred HHHHHHHhhcccCCCCEEEEEeCCcccccCcC-cccchH--HHHHHHHHHHHHcCCcEEEEccccCceeeeecccCcc--
Q 008823 342 KWLEEDLANVEREVTPWLVATWHAPWYSTYKA-HYREAE--CMRVAMEDLLYKYGVDVVFNGHVHAYERSNRVYNYTL-- 416 (552)
Q Consensus 342 ~WL~~~L~~~~r~~~pwiIV~~H~P~y~s~~~-~~~~~~--~~r~~l~~ll~~y~VdlvlsGH~H~yeR~~pv~n~~~-- 416 (552)
+||+++|++++|+++||+||+.|+|||++... ++++.+ .||..||+||.+|+||++|.||+|.|||++|++|.++
T Consensus 278 ~WL~~dL~~v~r~~tPWlIv~~HrP~Y~S~~~~~~reG~~~~~~~~LE~l~~~~~VDvvf~GHvH~YER~~piyn~~~~~ 357 (452)
T KOG1378|consen 278 QWLERDLASVDRKKTPWLIVQGHRPMYCSSNDAHYREGEFESMREGLEPLFVKYKVDVVFWGHVHRYERFCPIYNNTCGT 357 (452)
T ss_pred HHHHHHHHHhcccCCCeEEEEecccceecCCchhhccCcchhhHHHHHHHHHHhceeEEEeccceehhccchhhcceeec
Confidence 99999999999887999999999999999765 777666 8999999999999999999999999999999999887
Q ss_pred --------CCCCCeEEEeCCCCccCCCCCCCCCCCCCCCCCCCCCceecCCCcccccccccCCCCCCCCCCCCCCCccee
Q 008823 417 --------DPCGPVHITVGDGGNREKMAVPHADEPGNCPEPSTTPDKILGGGKFCGFNFTSGPASGKFCWDRQPDYSAFR 488 (552)
Q Consensus 417 --------~~~g~vyiv~G~gG~~e~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~p~wsa~~ 488 (552)
++++|+||++|+|||.|+++..+ .+||+|||||
T Consensus 358 ~~~~~~~~d~~aPvyI~~G~~G~~e~~~~~~---------------------------------------~~~p~~Sa~R 398 (452)
T KOG1378|consen 358 GWGPVHLVDGMAPIYITVGDGGNHEHLDPFS---------------------------------------SPQPEWSAFR 398 (452)
T ss_pred cCCcccccCCCCCEEEEEccCCcccccCccc---------------------------------------CCCCcccccc
Confidence 89999999999999998876210 3689999999
Q ss_pred cCCccEEEEEEecCCceEEEEEEecCCceeeeEEEEEEeCCCCCCC
Q 008823 489 ESSFGHGILEVKNETHALWTWHRNQDFYEAAGDQIYIVRQPDLCPV 534 (552)
Q Consensus 489 ~~~~G~~~l~v~n~t~l~~~~~~~~d~~~~v~D~~~i~k~~~~~~~ 534 (552)
+.+|||++|+++|.||++|+|+|++|.+++++|+|||+|+...|..
T Consensus 399 ~~dfG~~~L~v~N~TH~~~~~~~~~d~~g~~~D~fwl~k~~~~~~~ 444 (452)
T KOG1378|consen 399 EGDFGYTRLTAKNGTHAHVHWVRNSDASGVVIDSFWLIKDYRDMVV 444 (452)
T ss_pred cccCCeEEEEEecCceEEEEEEeccCCCceEeeeEEEEcccCcccc
Confidence 9999999999999999999999999999999999999999766543
No 2
>PLN02533 probable purple acid phosphatase
Probab=100.00 E-value=8.3e-77 Score=635.66 Aligned_cols=361 Identities=46% Similarity=0.824 Sum_probs=314.9
Q ss_pred CCCCCCceEEEeecCCCCeeEEEEEeCcccccCCCCCCCCCCCccEEEEcccCCCCCeEEEEEEEEEeeeeccCCccccc
Q 008823 81 VEGFEPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYT 160 (552)
Q Consensus 81 ~~~~~P~qi~lt~~~~p~s~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~~~g~~~~y~~~~~~~g~~~y~ 160 (552)
.....|+||||++++ +++|+|+|.|.+. ..+.|+||++++.+..++.|++.+|+.. ..|+
T Consensus 39 ~~~~~P~qvhls~~~-~~~m~V~W~T~~~-------------~~~~V~yG~~~~~l~~~a~g~~~~~~~~------~~~~ 98 (427)
T PLN02533 39 DDPTHPDQVHISLVG-PDKMRISWITQDS-------------IPPSVVYGTVSGKYEGSANGTSSSYHYL------LIYR 98 (427)
T ss_pred CCCCCCceEEEEEcC-CCeEEEEEECCCC-------------CCCEEEEecCCCCCcceEEEEEEEEecc------cccc
Confidence 355689999999998 8999999999763 2478999999999999999998888632 3477
Q ss_pred cCeEEEEEeCCCCCCCEEEEEEecCCCCCccceeEEEcCCCCCCCCCCeEEEEEeccCCCCChHHHHHHHHHCCCCEEEE
Q 008823 161 SGIIHHVRLTGLKPDTLYHYQCGDPSIPAMSGTYCFRTMPDSSSTSYPSRIAIVGDVGLTYNTTSTVSHMISNRPDLILL 240 (552)
Q Consensus 161 s~~~h~v~ltgL~P~T~Y~Yrvg~~~~~~~S~~~~F~T~p~~g~~~~p~rfaviGD~g~~~~~~~~l~~l~~~~pDfvl~ 240 (552)
+|++|+|+|+||+|+|+|+||||.. .+|++|+|+|+|.. .++||+++||+|.......+++++.+.+||||||
T Consensus 99 ~g~iH~v~l~~L~p~T~Y~Yrvg~~---~~s~~~~F~T~p~~----~~~~f~v~GDlG~~~~~~~tl~~i~~~~pD~vl~ 171 (427)
T PLN02533 99 SGQINDVVIGPLKPNTVYYYKCGGP---SSTQEFSFRTPPSK----FPIKFAVSGDLGTSEWTKSTLEHVSKWDYDVFIL 171 (427)
T ss_pred CCeEEEEEeCCCCCCCEEEEEECCC---CCccceEEECCCCC----CCeEEEEEEeCCCCcccHHHHHHHHhcCCCEEEE
Confidence 8999999999999999999999964 46899999998853 3799999999998766667889998889999999
Q ss_pred cCccccccccccCCCCCCcccccCCCCCCcccchHHHHHHHHhhhhhhccCCeEEecCCccccccc--cchhhhhhhccc
Q 008823 241 VGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDYWGRYMQPVLSKVPIMVVEGNHEYEEQA--ENRTFVAYTSRF 318 (552)
Q Consensus 241 ~GDl~Yad~~~~~G~~~d~~~~~~~~~~~~e~y~~~wd~~~~~l~~l~~~iP~~~v~GNHE~~~~~--~~~~f~~y~~rF 318 (552)
+||++|++. |+.+|+.|.++++++.+.+|+|+++||||..... ...+|..|..+|
T Consensus 172 ~GDl~y~~~-----------------------~~~~wd~f~~~i~~l~s~~P~m~~~GNHE~~~~~~~~~~~f~~y~~rf 228 (427)
T PLN02533 172 PGDLSYANF-----------------------YQPLWDTFGRLVQPLASQRPWMVTHGNHELEKIPILHPEKFTAYNARW 228 (427)
T ss_pred cCccccccc-----------------------hHHHHHHHHHHhhhHhhcCceEEeCccccccccccccCcCccchhhcc
Confidence 999999642 3679999999999999999999999999986432 235688899999
Q ss_pred CCCCCCCCCCCceeEEeehh-----------------HHHHHHHHHHhhcccCCCCEEEEEeCCcccccCcCcccc--hH
Q 008823 319 AFPSKESGSLSKFYYSFNAG-----------------DQYKWLEEDLANVEREVTPWLVATWHAPWYSTYKAHYRE--AE 379 (552)
Q Consensus 319 ~~P~~~~~~~~~~yYsfd~G-----------------~Q~~WL~~~L~~~~r~~~pwiIV~~H~P~y~s~~~~~~~--~~ 379 (552)
.||..+.+...+.||||++| +|++||+++|++++|+.+||+||++|+|+|++...+... ..
T Consensus 229 ~mP~~~~g~~~~~yYSfd~g~vhfI~Lds~~~~~~~~~Q~~WLe~dL~~~~r~~~pwiIv~~H~P~y~s~~~~~~~~~~~ 308 (427)
T PLN02533 229 RMPFEESGSTSNLYYSFNVYGVHIIMLGSYTDFEPGSEQYQWLENNLKKIDRKTTPWVVAVVHAPWYNSNEAHQGEKESV 308 (427)
T ss_pred cCCccccCCCCCceEEEEECCEEEEEEeCCccccCchHHHHHHHHHHHhhcccCCCEEEEEeCCCeeecccccCCcchhH
Confidence 99987766778899999998 999999999999988889999999999999876544322 24
Q ss_pred HHHHHHHHHHHHcCCcEEEEccccCceeeeecccCccCCCCCeEEEeCCCCccCCCCCCCCCCCCCCCCCCCCCceecCC
Q 008823 380 CMRVAMEDLLYKYGVDVVFNGHVHAYERSNRVYNYTLDPCGPVHITVGDGGNREKMAVPHADEPGNCPEPSTTPDKILGG 459 (552)
Q Consensus 380 ~~r~~l~~ll~~y~VdlvlsGH~H~yeR~~pv~n~~~~~~g~vyiv~G~gG~~e~~~~~~~~~~~~~p~~~~~~~~~~~~ 459 (552)
.+|+.|++||++|+||++|+||+|.|||++|+++++++++|++||++|+||+.|++...
T Consensus 309 ~~r~~le~Ll~~~~VdlvlsGH~H~YeR~~p~~~~~~~~~gpvyiv~G~gG~~e~~~~~--------------------- 367 (427)
T PLN02533 309 GMKESMETLLYKARVDLVFAGHVHAYERFDRVYQGKTDKCGPVYITIGDGGNREGLATK--------------------- 367 (427)
T ss_pred HHHHHHHHHHHHhCCcEEEecceecccccccccCCccCCCCCEEEEeCCCccccccccc---------------------
Confidence 57899999999999999999999999999999999999999999999999998875411
Q ss_pred CcccccccccCCCCCCCCCCCCCCCcceecCCccEEEEEEecCCceEEEEEEecCCceeeeEEEEEEeCC
Q 008823 460 GKFCGFNFTSGPASGKFCWDRQPDYSAFRESSFGHGILEVKNETHALWTWHRNQDFYEAAGDQIYIVRQP 529 (552)
Q Consensus 460 ~~~~~~~~~~~p~~~~~~~~~~p~wsa~~~~~~G~~~l~v~n~t~l~~~~~~~~d~~~~v~D~~~i~k~~ 529 (552)
| +.++|+||+||+.+|||++|+|+|+|||+|+|+||+|+++++.|+|||+|..
T Consensus 368 ----------------~-~~~~~~~s~~r~~~~G~~~l~v~n~t~l~~~~~~~~~~~~~~~D~~~i~~~~ 420 (427)
T PLN02533 368 ----------------Y-IDPKPDISLFREASFGHGQLNVVDANTMEWTWHRNDDDQSVASDSVWLKSLL 420 (427)
T ss_pred ----------------c-CCCCCCceeEEeccCCEEEEEEEcCCeEEEEEEecCCCCceeeeEEEEEecc
Confidence 1 1467999999999999999999999999999999999878899999999974
No 3
>cd00839 MPP_PAPs purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain. Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diver
Probab=100.00 E-value=1.6e-43 Score=362.48 Aligned_cols=259 Identities=46% Similarity=0.787 Sum_probs=207.0
Q ss_pred CCeEEEEEeccCCC-CChHHHHHHHHH--CCCCEEEEcCccccccccccCCCCCCcccccCCCCCCcccchHHHHHHHHh
Q 008823 207 YPSRIAIVGDVGLT-YNTTSTVSHMIS--NRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDYWGRY 283 (552)
Q Consensus 207 ~p~rfaviGD~g~~-~~~~~~l~~l~~--~~pDfvl~~GDl~Yad~~~~~G~~~d~~~~~~~~~~~~e~y~~~wd~~~~~ 283 (552)
.++||+++||+|.. ....++++++.+ .+|||||++||++|++. .. .+.+|+.|++.
T Consensus 3 ~~~~f~v~gD~~~~~~~~~~~~~~l~~~~~~~d~vl~~GDl~~~~~-----~~----------------~~~~~~~~~~~ 61 (294)
T cd00839 3 TPFKFAVFGDMGQNTNNSTNTLDHLEKELGNYDAILHVGDLAYADG-----YN----------------NGSRWDTFMRQ 61 (294)
T ss_pred CcEEEEEEEECCCCCCCcHHHHHHHHhccCCccEEEEcCchhhhcC-----Cc----------------cchhHHHHHHH
Confidence 37999999999973 456778888887 68999999999998642 10 12579999999
Q ss_pred hhhhhccCCeEEecCCccccccccchhhhhhhcccCCCCCCCCCCCceeEEeehh--------------------HHHHH
Q 008823 284 MQPVLSKVPIMVVEGNHEYEEQAENRTFVAYTSRFAFPSKESGSLSKFYYSFNAG--------------------DQYKW 343 (552)
Q Consensus 284 l~~l~~~iP~~~v~GNHE~~~~~~~~~f~~y~~rF~~P~~~~~~~~~~yYsfd~G--------------------~Q~~W 343 (552)
++++...+|+++++||||............+..++.++........+.||+|++| +|++|
T Consensus 62 ~~~~~~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ysf~~g~v~fi~Lds~~~~~~~~~~~~q~~W 141 (294)
T cd00839 62 IEPLASYVPYMVTPGNHEADYNFSFYKIKAFFPRFRFPHSPSGSTSNLWYSFDVGPVHFVSLSTEVDFYGDGPGSPQYDW 141 (294)
T ss_pred HHHHHhcCCcEEcCcccccccCCCCcccccccccccccCCCCCCCCCceEEEeeCCEEEEEEecccccccCCCCcHHHHH
Confidence 9999999999999999999754332211111123334444334456789999887 79999
Q ss_pred HHHHHhhcccCCCCEEEEEeCCcccccCcCccc--chHHHHHHHHHHHHHcCCcEEEEccccCceeeeecccCc------
Q 008823 344 LEEDLANVEREVTPWLVATWHAPWYSTYKAHYR--EAECMRVAMEDLLYKYGVDVVFNGHVHAYERSNRVYNYT------ 415 (552)
Q Consensus 344 L~~~L~~~~r~~~pwiIV~~H~P~y~s~~~~~~--~~~~~r~~l~~ll~~y~VdlvlsGH~H~yeR~~pv~n~~------ 415 (552)
|+++|+++++.+.+|+||++|+|+|+....... .....++.|++||++|+|+++|+||+|.|+|++|+++++
T Consensus 142 L~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~~~l~~ll~~~~v~~vl~GH~H~y~r~~p~~~~~~~~~~~ 221 (294)
T cd00839 142 LEADLAKVDRSKTPWIIVMGHRPMYCSNTDHDDCIEGEKMRAALEDLFYKYGVDLVLSGHVHAYERTCPVYNGTVVGDCN 221 (294)
T ss_pred HHHHHHHhcccCCCeEEEEeccCcEecCccccccchhHHHHHHHHHHHHHhCCCEEEEccceeeEeechhhCCEeccccc
Confidence 999999987767799999999999987543322 245678999999999999999999999999999998865
Q ss_pred --cCCCCCeEEEeCCCCccCCCCCCCCCCCCCCCCCCCCCceecCCCcccccccccCCCCCCCCCCCCCCCcceecCCcc
Q 008823 416 --LDPCGPVHITVGDGGNREKMAVPHADEPGNCPEPSTTPDKILGGGKFCGFNFTSGPASGKFCWDRQPDYSAFRESSFG 493 (552)
Q Consensus 416 --~~~~g~vyiv~G~gG~~e~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~p~wsa~~~~~~G 493 (552)
.+++|++||++|+||+.+...... ...++|++++...||
T Consensus 222 ~~~~~~g~~yiv~G~~G~~~~~~~~~---------------------------------------~~~~~~~~~~~~~~g 262 (294)
T cd00839 222 PYSNPKGPVHIVIGAGGNDEGLDPFS---------------------------------------APPPAWSAFRESDYG 262 (294)
T ss_pred cccCCCccEEEEECCCccccCcCccc---------------------------------------CCCCCceEEEeccCC
Confidence 368899999999999976532100 112689999999999
Q ss_pred EEEEEEecCCceEEEEEEecCCceeeeEEEEEEe
Q 008823 494 HGILEVKNETHALWTWHRNQDFYEAAGDQIYIVR 527 (552)
Q Consensus 494 ~~~l~v~n~t~l~~~~~~~~d~~~~v~D~~~i~k 527 (552)
|++|+|.|+|+|+|+|+++.++ +|+|+|+|+|
T Consensus 263 ~~~~~~~~~t~l~~~~~~~~~g--~v~D~f~i~k 294 (294)
T cd00839 263 FGRLTVHNSTHLHFEWIRNDDG--VVIDSFWIIK 294 (294)
T ss_pred EEEEEEEecCeEEEEEEECCCC--eEEEEEEEeC
Confidence 9999999999999999998887 9999999986
No 4
>PTZ00422 glideosome-associated protein 50; Provisional
Probab=99.98 E-value=8.3e-31 Score=273.37 Aligned_cols=240 Identities=16% Similarity=0.237 Sum_probs=176.2
Q ss_pred CeEEEEEeccCCCCChHHHHHHHH-----HCCCCEEEEcCccccccccccCCCCCCcccccCCCCCCcccchHHHHH-HH
Q 008823 208 PSRIAIVGDVGLTYNTTSTVSHMI-----SNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDY-WG 281 (552)
Q Consensus 208 p~rfaviGD~g~~~~~~~~l~~l~-----~~~pDfvl~~GDl~Yad~~~~~G~~~d~~~~~~~~~~~~e~y~~~wd~-~~ 281 (552)
.+||+++||+|.+...+..+++.+ +.++||||.+||+. .++ -. ...+++|.. |.
T Consensus 26 ~l~F~~vGDwG~g~~~Q~~VA~~M~~~~~~~~~~FVls~GDNF-~~G-----v~--------------sv~Dp~f~~~FE 85 (394)
T PTZ00422 26 QLRFASLGNWGTGSKQQKLVASYLKQYAKNERVTFLVSPGSNF-PGG-----VD--------------GLNDPKWKHCFE 85 (394)
T ss_pred eEEEEEEecCCCCchhHHHHHHHHHHHHHhCCCCEEEECCccc-cCC-----CC--------------CccchhHHhhHh
Confidence 689999999997655555444332 35899999999998 333 21 112466765 44
Q ss_pred Hhhhhhh--ccCCeEEecCCccccccccchh--hh------------h------hhcccCCCCCCCCCCCceeEEe----
Q 008823 282 RYMQPVL--SKVPIMVVEGNHEYEEQAENRT--FV------------A------YTSRFAFPSKESGSLSKFYYSF---- 335 (552)
Q Consensus 282 ~~l~~l~--~~iP~~~v~GNHE~~~~~~~~~--f~------------~------y~~rF~~P~~~~~~~~~~yYsf---- 335 (552)
+...... ..+||++|+||||+.++...+- +. . ...||.||.. ||.+
T Consensus 86 ~vY~~~s~~L~~Pwy~vLGNHDy~Gn~~AQi~r~~~~y~~~~~~~~~~y~~~~~~~~RW~mP~~--------yY~~~~~f 157 (394)
T PTZ00422 86 NVYSEESGDMQIPFFTVLGQADWDGNYNAELLKGQNVYLNGHGQTDIEYDSNNDIYPKWIMPNY--------WYHYFTHF 157 (394)
T ss_pred hhccCcchhhCCCeEEeCCcccccCCchhhhccccccccccccccccccccccccCCCccCCch--------hheeeeee
Confidence 4444444 6799999999999975543221 11 1 1358888862 2221
Q ss_pred -----------------------e-----------hh--HHHHHHHHHHhhcccCCCCEEEEEeCCcccccCcCcccchH
Q 008823 336 -----------------------N-----------AG--DQYKWLEEDLANVEREVTPWLVATWHAPWYSTYKAHYREAE 379 (552)
Q Consensus 336 -----------------------d-----------~G--~Q~~WL~~~L~~~~r~~~pwiIV~~H~P~y~s~~~~~~~~~ 379 (552)
| -. .|++||+++|+.+ ++.++|+||++|||+|+++. | ....
T Consensus 158 ~~~~~~~~~~~~~~~~~v~fifiDT~~l~~~~~~~~~~~~~w~~L~~~L~~a-~k~a~WkIVvGHhPIySsG~-h-g~~~ 234 (394)
T PTZ00422 158 TDTSGPSLLKSGHKDMSVAFIFIDTWILSSSFPYKKVSERAWQDLKATLEYA-PKIADYIIVVGDKPIYSSGS-S-KGDS 234 (394)
T ss_pred ecccccccccccCCCCEEEEEEEECchhcccCCccccCHHHHHHHHHHHHhh-ccCCCeEEEEecCceeecCC-C-CCCH
Confidence 1 01 7899999999754 35678999999999999864 2 3446
Q ss_pred HHHHHHHHHHHHcCCcEEEEccccCceeeeecccCccCCCCCeEEEeCCCCccCCCCCCCCCCCCCCCCCCCCCceecCC
Q 008823 380 CMRVAMEDLLYKYGVDVVFNGHVHAYERSNRVYNYTLDPCGPVHITVGDGGNREKMAVPHADEPGNCPEPSTTPDKILGG 459 (552)
Q Consensus 380 ~~r~~l~~ll~~y~VdlvlsGH~H~yeR~~pv~n~~~~~~g~vyiv~G~gG~~e~~~~~~~~~~~~~p~~~~~~~~~~~~ 459 (552)
+++..|+|||++|+||++|+||+|.+||.. ++|+.||++|+||...+..
T Consensus 235 ~L~~~L~PLL~ky~VdlYisGHDH~lq~i~--------~~gt~yIvSGaGs~~~~~~----------------------- 283 (394)
T PTZ00422 235 YLSYYLLPLLKDAQVDLYISGYDRNMEVLT--------DEGTAHINCGSGGNSGRKS----------------------- 283 (394)
T ss_pred HHHHHHHHHHHHcCcCEEEEccccceEEec--------CCCceEEEeCccccccCCC-----------------------
Confidence 789999999999999999999999999983 4689999999998854321
Q ss_pred CcccccccccCCCCCCCCCCCCCCCcceecCCccEEEEEEecCCceEEEEEEecCCceeeeEEEEEEeCCCC
Q 008823 460 GKFCGFNFTSGPASGKFCWDRQPDYSAFRESSFGHGILEVKNETHALWTWHRNQDFYEAAGDQIYIVRQPDL 531 (552)
Q Consensus 460 ~~~~~~~~~~~p~~~~~~~~~~p~wsa~~~~~~G~~~l~v~n~t~l~~~~~~~~d~~~~v~D~~~i~k~~~~ 531 (552)
...++|++|....+||+.+++ +.+.|.++|+.+.+| ++++++.+.|.+..
T Consensus 284 -------------------~~~~~~s~F~~~~~GF~~~~l-~~~~l~~~fid~~~G--kvL~~~~~~~~~~~ 333 (394)
T PTZ00422 284 -------------------IMKNSKSLFYSEDIGFCIHEL-NAEGMVTKFVSGNTG--EVLYTHKQPLKKRK 333 (394)
T ss_pred -------------------CCCCCCcceecCCCCEEEEEE-ecCEEEEEEEeCCCC--cEEEEeeecccchh
Confidence 012457788888999999998 899999999965565 99999999776543
No 5
>cd07378 MPP_ACP5 Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain. Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site ma
Probab=99.96 E-value=9.4e-28 Score=243.83 Aligned_cols=234 Identities=24% Similarity=0.370 Sum_probs=154.5
Q ss_pred eEEEEEeccCCCC-C-hHH---HHHHHH-HCCCCEEEEcCccccccccccCCCCCCcccccCCCCCCcccchHHH-HHHH
Q 008823 209 SRIAIVGDVGLTY-N-TTS---TVSHMI-SNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRW-DYWG 281 (552)
Q Consensus 209 ~rfaviGD~g~~~-~-~~~---~l~~l~-~~~pDfvl~~GDl~Yad~~~~~G~~~d~~~~~~~~~~~~e~y~~~w-d~~~ 281 (552)
++|+++||+|... . ... .+.++. +.+|||||++||++|+++. .. .+..+| +.|.
T Consensus 1 ~~f~~~gD~g~~~~~~~~~~~~~~~~~~~~~~~dfvv~~GD~~y~~g~-----~~--------------~~~~~~~~~~~ 61 (277)
T cd07378 1 LRFLALGDWGGGGTAGQKAVAKAMAKVAAELGPDFILSLGDNFYDDGV-----GS--------------VDDPRFETTFE 61 (277)
T ss_pred CeEEEEeecCCCCCHHHHHHHHHHHHHHHhcCCCEEEeCCCccccCCC-----CC--------------CcchHHHHHHH
Confidence 4899999999862 2 222 233333 3699999999999997532 10 112334 3455
Q ss_pred HhhhhhhccCCeEEecCCccccccccch-hhhh--hhcccCCCCCC----CC-----C------CCceeEE---------
Q 008823 282 RYMQPVLSKVPIMVVEGNHEYEEQAENR-TFVA--YTSRFAFPSKE----SG-----S------LSKFYYS--------- 334 (552)
Q Consensus 282 ~~l~~l~~~iP~~~v~GNHE~~~~~~~~-~f~~--y~~rF~~P~~~----~~-----~------~~~~yYs--------- 334 (552)
+.++.+..++|+++++||||+..+.... .+.. +..+|.+|... .+ . ....++.
T Consensus 62 ~~~~~~~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~i~LDt~~~~~~~~~~~~~ 141 (277)
T cd07378 62 DVYSAPSLQVPWYLVLGNHDYSGNVSAQIDYTKRPNSPRWTMPAYYYRVSFPFPSSDTTVEFIMIDTVPLCGNSDDIASP 141 (277)
T ss_pred HHccchhhcCCeEEecCCcccCCCchheeehhccCCCCCccCcchheEEEeecCCCCCEEEEEEEeChhHcCcccccccc
Confidence 5555555689999999999997432111 1111 12333333210 00 0 0000000
Q ss_pred -----eehh-HHHHHHHHHHhhcccCCCCEEEEEeCCcccccCcCcccchHHHHHHHHHHHHHcCCcEEEEccccCceee
Q 008823 335 -----FNAG-DQYKWLEEDLANVEREVTPWLVATWHAPWYSTYKAHYREAECMRVAMEDLLYKYGVDVVFNGHVHAYERS 408 (552)
Q Consensus 335 -----fd~G-~Q~~WL~~~L~~~~r~~~pwiIV~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~y~VdlvlsGH~H~yeR~ 408 (552)
-..+ +|++||+++|+++. .+|+||++|+|+++..... .....++.|++++.+++|+++|+||+|.+++.
T Consensus 142 ~~~~~~~~~~~Q~~wL~~~L~~~~---~~~~iv~~H~P~~~~~~~~--~~~~~~~~l~~l~~~~~v~~vl~GH~H~~~~~ 216 (277)
T cd07378 142 YGPPNGKLAEEQLAWLEKTLAAST---ADWKIVVGHHPIYSSGEHG--PTSCLVDRLLPLLKKYKVDAYLSGHDHNLQHI 216 (277)
T ss_pred ccCcchhhHHHHHHHHHHHHHhcC---CCeEEEEeCccceeCCCCC--CcHHHHHHHHHHHHHcCCCEEEeCCcccceee
Confidence 0011 89999999999864 3799999999999764322 22467899999999999999999999999998
Q ss_pred eecccCccCCCCCeEEEeCCCCccCCCCCCCCCCCCCCCCCCCCCceecCCCcccccccccCCCCCCCCCCCCCCCccee
Q 008823 409 NRVYNYTLDPCGPVHITVGDGGNREKMAVPHADEPGNCPEPSTTPDKILGGGKFCGFNFTSGPASGKFCWDRQPDYSAFR 488 (552)
Q Consensus 409 ~pv~n~~~~~~g~vyiv~G~gG~~e~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~p~wsa~~ 488 (552)
.+ +..|+.||++|+||......... ...+|.|++++
T Consensus 217 ~~------~~~~~~~i~~G~~~~~~~~~~~~--------------------------------------~~~~~~~~~~~ 252 (277)
T cd07378 217 KD------DGSGTSFVVSGAGSKARPSVKHI--------------------------------------DKVPQFFSGFT 252 (277)
T ss_pred ec------CCCCcEEEEeCCCcccCCCCCcc--------------------------------------Ccccccccccc
Confidence 54 34699999999988865432100 01235688899
Q ss_pred cCCccEEEEEEecCCceEEEEEE
Q 008823 489 ESSFGHGILEVKNETHALWTWHR 511 (552)
Q Consensus 489 ~~~~G~~~l~v~n~t~l~~~~~~ 511 (552)
...+||.+|+| ..+++.++|+.
T Consensus 253 ~~~~Gy~~i~v-~~~~l~~~~~~ 274 (277)
T cd07378 253 SSGGGFAYLEL-TKEELTVRFYD 274 (277)
T ss_pred cCCCCEEEEEE-ecCEEEEEEEC
Confidence 99999999999 55699999984
No 6
>PF09423 PhoD: PhoD-like phosphatase; InterPro: IPR018946 This entry contains a number of putative proteins as well as Alkaline phosphatase D which catalyses the reaction: A phosphate monoester + H(2)O = an alcohol + phosphate ; PDB: 2YEQ_B.
Probab=99.92 E-value=2.5e-23 Score=225.97 Aligned_cols=298 Identities=22% Similarity=0.302 Sum_probs=149.5
Q ss_pred cCCC-CeeEEEEEeCcccccCCCCCCCCCCCccEEEEcccCCCCCeEEEEEEEEEeeeeccCCccccccCeEEEEEeCCC
Q 008823 94 SSAH-DSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSGIIHHVRLTGL 172 (552)
Q Consensus 94 ~~~p-~s~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~~~g~~~~y~~~~~~~g~~~y~s~~~h~v~ltgL 172 (552)
+||| .+.+|.|+...+.......| ..+..|+|..+.+.....+.....+.. +-...+.++|.|+||
T Consensus 5 sGdp~~~svilWtR~~~~~~~~~~~----~~~~~V~~~va~d~~~~~~~~~~~~~~---------~~~~d~t~~v~v~gL 71 (453)
T PF09423_consen 5 SGDPTPDSVILWTRVTPPAAAGGMP----KAPVPVRWEVATDPEFSNVVRSGTVTT---------TAERDFTVKVDVTGL 71 (453)
T ss_dssp EE---SS-EEEEEE--SBGGTB-------SS-EEEEEEEESSTTSSSEEEEEEEEE----------GGGTTEEEEEE-S-
T ss_pred ccCCCCCEEEEEEEecCcccCCCCC----CCcEEEEEEEECCCCccceEEecceec---------ccCCCeEeecccCCC
Confidence 4667 57888999976521100011 123455655554433332222221111 112456799999999
Q ss_pred CCCCEEEEEEecCCCCCccceeEEEcCCCCCCCCCCeEEEEEeccCCCCChHHHHHHHHH-CCCCEEEEcCcccccccc-
Q 008823 173 KPDTLYHYQCGDPSIPAMSGTYCFRTMPDSSSTSYPSRIAIVGDVGLTYNTTSTVSHMIS-NRPDLILLVGDVTYANLY- 250 (552)
Q Consensus 173 ~P~T~Y~Yrvg~~~~~~~S~~~~F~T~p~~g~~~~p~rfaviGD~g~~~~~~~~l~~l~~-~~pDfvl~~GDl~Yad~~- 250 (552)
+|+|+|+||+..+.....|++++|+|+|.... .++||++++|.+.......+++++.+ .+|||+||+||.+|+|..
T Consensus 72 ~p~t~Y~Y~~~~~~~~~~s~~g~~rT~p~~~~--~~~r~a~~SC~~~~~~~~~~~~~~a~~~~~D~~l~lGD~IY~d~~~ 149 (453)
T PF09423_consen 72 QPGTRYYYRFVVDGGGQTSPVGRFRTAPDGDP--DPFRFAFGSCQNYEDGYFPAYRRIAERDDPDFVLHLGDQIYEDGGG 149 (453)
T ss_dssp -TT-EEEEEEEE--TTEE---EEEE--TT-------EEEEEE----CCC---HHHHHHTT-S--SEEEE-S-SS----TT
T ss_pred CCCceEEEEEEEecCCCCCCceEEEcCCCCCC--CceEEEEECCCCcccChHHHHHhhhccCCCcEEEEeCCeeeccCCc
Confidence 99999999999865467899999999976543 36999999999876566778889888 699999999999999741
Q ss_pred -ccCCCCCCcccccCC--CCCCcccchHHHHHHH--HhhhhhhccCCeEEecCCccccccccc----------hhh----
Q 008823 251 -LTNGTGSDCYACSFA--NSPIHETYQPRWDYWG--RYMQPVLSKVPIMVVEGNHEYEEQAEN----------RTF---- 311 (552)
Q Consensus 251 -~~~G~~~d~~~~~~~--~~~~~e~y~~~wd~~~--~~l~~l~~~iP~~~v~GNHE~~~~~~~----------~~f---- 311 (552)
+.........+...| .....+.|+.+|..+. ..++.+.+.+|+++++.+||+.++... ..+
T Consensus 150 ~~~~~~~~~~~r~~~p~~~~~~l~~yR~~y~~~~~~p~l~~~~~~~P~~~iwDDHdi~nn~~~~~~~~~~~~~~~~~~~~ 229 (453)
T PF09423_consen 150 GYGNLSRRPIGRAPEPAHEAETLDDYRRRYRQYRSDPDLRRLHANVPWIMIWDDHDIGNNWWGDGAENHQDTSGDFQDRR 229 (453)
T ss_dssp SS--TT---S-----SSSS--SHHHHHHHHHHHHT-HHHHHHHHHSEEEE---STTTSTT-BTTB-STT---HHHHHHHH
T ss_pred ccccccccccccccccccccccHHHHHHHHHHHcCCHHHHHHhhcccEEEEccCceecccccCCccccccccccchHHHH
Confidence 000000000000111 1223455666665543 446778899999999999999765431 011
Q ss_pred -hhhhccc-CCCCCC---CCCCCceeEEeehh---------------------------------------HHHHHHHHH
Q 008823 312 -VAYTSRF-AFPSKE---SGSLSKFYYSFNAG---------------------------------------DQYKWLEED 347 (552)
Q Consensus 312 -~~y~~rF-~~P~~~---~~~~~~~yYsfd~G---------------------------------------~Q~~WL~~~ 347 (552)
.+++..+ .+|... .+.....|++|.+| +|.+||++.
T Consensus 230 ~~a~~ay~e~~p~r~~~~~~~~~~~y~~~~~G~~~~~~~LD~R~~R~~~~~~~~~~~~~~~~~~~~~mLG~~Q~~wL~~~ 309 (453)
T PF09423_consen 230 RAAYQAYFEYQPVRNPDPPGDQGRIYRSFRYGDLVEFFMLDTRSYRSPPPCDGPGDTCPAADDPSRTMLGEEQWDWLEDW 309 (453)
T ss_dssp HHHHHHHHHHS---GGG-BTTB----EEEEETTTEEEEE--SSSS----CCCSSEE--HHHH-TT--SS-HHHHHHHHHH
T ss_pred HHHHHHHHhhcCccCCCccCCCCceEEEEecCCceeEEEEechhccccccccccccccccccCCccCcCCHHHHHHHHHH
Confidence 1222222 133321 12245678888877 899999999
Q ss_pred HhhcccCCCCEEEEEeCCcccccC-----------cCcccchHHHHHHHHHHHHHcCCc--EEEEccccCceeee
Q 008823 348 LANVEREVTPWLVATWHAPWYSTY-----------KAHYREAECMRVAMEDLLYKYGVD--VVFNGHVHAYERSN 409 (552)
Q Consensus 348 L~~~~r~~~pwiIV~~H~P~y~s~-----------~~~~~~~~~~r~~l~~ll~~y~Vd--lvlsGH~H~yeR~~ 409 (552)
|++. .++|+|+..-.|+.... ...+......|++|.++|.+.++. ++|+|.+|......
T Consensus 310 L~~s---~a~~kvi~s~v~~~~~~~~~~~~~~~~~~d~W~g~~~er~~Ll~~l~~~~~~~vV~LSGDvH~~~~~~ 381 (453)
T PF09423_consen 310 LASS---QATWKVIGSSVPFSPLNFPDAAEGLPFNMDSWDGYPAERQRLLDFLRESGIRNVVFLSGDVHASAASR 381 (453)
T ss_dssp HHH-----SSEEEEE-SS--S---SS-SS-S--EETTSGGGSHHHHHHHHHHHHHTT---EEEEE-SSSSEEEEE
T ss_pred HhcC---CCcEEEEEeCCceecccccccccccccCCCchhhCHHHHHHHHHHHHhhCCCCEEEEecCcchheeee
Confidence 9984 47899999888765432 123444556799999999998886 78999999977664
No 7
>cd07395 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, metallophosphatase domain. CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is th
Probab=99.92 E-value=1.3e-23 Score=212.05 Aligned_cols=188 Identities=23% Similarity=0.344 Sum_probs=129.0
Q ss_pred CCeEEEEEeccCCCCC-----------------hHHHHHHHHHC--CCCEEEEcCccccccccccCCCCCCcccccCCCC
Q 008823 207 YPSRIAIVGDVGLTYN-----------------TTSTVSHMISN--RPDLILLVGDVTYANLYLTNGTGSDCYACSFANS 267 (552)
Q Consensus 207 ~p~rfaviGD~g~~~~-----------------~~~~l~~l~~~--~pDfvl~~GDl~Yad~~~~~G~~~d~~~~~~~~~ 267 (552)
.+++|++++|+|.+.. ....++.+.+. +||||+++||+++. +..
T Consensus 3 ~~~~f~~~sD~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~pd~ii~~GDl~~~------~~~----------- 65 (262)
T cd07395 3 GPFYFIQGADPQLGLIKKNLEGGGDEWDEEIKLTEQAVQAINKLNPKPKFVVVCGDLVNA------MPG----------- 65 (262)
T ss_pred CCEEEEEecCCccchhhccccCchhhhhhHHHHHHHHHHHHHhcCCCCCEEEEeCCcCCC------Ccc-----------
Confidence 3799999999998731 12334555555 89999999999963 211
Q ss_pred CCcccchHHHHHHHHhhhhhhccCCeEEecCCccccccccchhhhhhhcccCCCCCCCCCCCceeEEeehh---------
Q 008823 268 PIHETYQPRWDYWGRYMQPVLSKVPIMVVEGNHEYEEQAENRTFVAYTSRFAFPSKESGSLSKFYYSFNAG--------- 338 (552)
Q Consensus 268 ~~~e~y~~~wd~~~~~l~~l~~~iP~~~v~GNHE~~~~~~~~~f~~y~~rF~~P~~~~~~~~~~yYsfd~G--------- 338 (552)
.+..+.+|+.+.+.++.+...+|+++++||||+........+..|...|. ..||+|+.|
T Consensus 66 --~~~~~~~~~~~~~~~~~~~~~vp~~~i~GNHD~~~~~~~~~~~~f~~~~g----------~~~y~~~~~~~~~i~lds 133 (262)
T cd07395 66 --DELRERQVSDLKDVLSLLDPDIPLVCVCGNHDVGNTPTEESIKDYRDVFG----------DDYFSFWVGGVFFIVLNS 133 (262)
T ss_pred --hhhHHHHHHHHHHHHhhccCCCcEEEeCCCCCCCCCCChhHHHHHHHHhC----------CcceEEEECCEEEEEecc
Confidence 01112456777777777666899999999999854322222333333331 123333322
Q ss_pred --------------HHHHHHHHHHhhcccCCCCEEEEEeCCcccccCcCcc----cchHHHHHHHHHHHHHcCCcEEEEc
Q 008823 339 --------------DQYKWLEEDLANVEREVTPWLVATWHAPWYSTYKAHY----REAECMRVAMEDLLYKYGVDVVFNG 400 (552)
Q Consensus 339 --------------~Q~~WL~~~L~~~~r~~~pwiIV~~H~P~y~s~~~~~----~~~~~~r~~l~~ll~~y~VdlvlsG 400 (552)
+|++||+++|+++.+.+.+|+||++|+|++....... ......+++|.++|++++|+++|+|
T Consensus 134 ~~~~~~~~~~~~~~~ql~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~V~~v~~G 213 (262)
T cd07395 134 QLFFDPSEVPELAQAQDVWLEEQLEIAKESDCKHVIVFQHIPWFLEDPDEEDSYFNIPKSVRKPLLDKFKKAGVKAVFSG 213 (262)
T ss_pred ccccCccccccchHHHHHHHHHHHHHHHhccCCcEEEEECcCCccCCCCCCcccCCcCHHHHHHHHHHHHhcCceEEEEC
Confidence 8999999999997644567899999999986432211 1224567899999999999999999
Q ss_pred cccCceeeeecccCccCCCCCeEEEeCCCCc
Q 008823 401 HVHAYERSNRVYNYTLDPCGPVHITVGDGGN 431 (552)
Q Consensus 401 H~H~yeR~~pv~n~~~~~~g~vyiv~G~gG~ 431 (552)
|+|.+++.. -.|+.|++++++|.
T Consensus 214 H~H~~~~~~--------~~g~~~~~~~~~~~ 236 (262)
T cd07395 214 HYHRNAGGR--------YGGLEMVVTSAIGA 236 (262)
T ss_pred ccccCCceE--------ECCEEEEEcCceec
Confidence 999988753 23777888777664
No 8
>COG3540 PhoD Phosphodiesterase/alkaline phosphatase D [Inorganic ion transport and metabolism]
Probab=99.90 E-value=7e-23 Score=212.69 Aligned_cols=293 Identities=20% Similarity=0.277 Sum_probs=198.4
Q ss_pred cCCC-CeeEEEEEeCcccccCCCCCCCC-CCCccEEEEcccCCCCCeEEEEEEEEEeeeeccCCccccccCeEEEEEeCC
Q 008823 94 SSAH-DSVWISWITGEFQIGNNLKPLDP-KSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSGIIHHVRLTG 171 (552)
Q Consensus 94 ~~~p-~s~~V~W~T~~~~~g~~~~~~~p-~~~~~~V~yg~~~~~~~~~~~g~~~~y~~~~~~~g~~~y~s~~~h~v~ltg 171 (552)
++|| ....|-|+.-++. |++- ..++..+++++.++..+.+..|+..+ .-.+.+.+|+.++|
T Consensus 45 SGDp~~~svviWTRl~P~------p~~~g~~v~V~wEvs~~~~f~~ivr~gt~~a-----------~p~~dhtv~v~~~g 107 (522)
T COG3540 45 SGDPTATSVVIWTRLDPE------PLNGGRPVPVIWEVSTDENFSNIVRKGTVIA-----------SPELDHTVHVDLRG 107 (522)
T ss_pred cCCCCCCeEEEEEccCCc------cccCCCCcceEEEecCCccHHHHHhcCCccC-----------CcccCceEEEeccC
Confidence 5778 5788999997753 2211 13456777777765444433333211 01134669999999
Q ss_pred CCCCCEEEEEEecCCCCCccceeEEEcCCCCCCCCCCeEEEEEeccCCCCChHHHHHHHHHCCCCEEEEcCccccccccc
Q 008823 172 LKPDTLYHYQCGDPSIPAMSGTYCFRTMPDSSSTSYPSRIAIVGDVGLTYNTTSTVSHMISNRPDLILLVGDVTYANLYL 251 (552)
Q Consensus 172 L~P~T~Y~Yrvg~~~~~~~S~~~~F~T~p~~g~~~~p~rfaviGD~g~~~~~~~~l~~l~~~~pDfvl~~GDl~Yad~~~ 251 (552)
|+|++.|+||+..++ ..|.+++|||+|+.+....-++|++.++.|...+.-.++++|.+.+|||+||+||.+|+++..
T Consensus 108 L~P~~~yfYRf~~~~--~~spvGrtrTapa~~~~i~~~~fa~ascQ~~~~gy~~aY~~ma~~~~D~viH~GDyIYeyg~~ 185 (522)
T COG3540 108 LSPDQDYFYRFKAGD--ERSPVGRTRTAPAPGRAIRFVWFADASCQGWEIGYMTAYKTMAKEEPDFVIHLGDYIYEYGPI 185 (522)
T ss_pred CCCCceEEEEEeeCC--ccccccccccCCCCCCcchhhhhhhccccccccchhHHHHHHHhcCCCEEEEcCCeeeccCCc
Confidence 999999999999876 788999999999987644344555555666666667788999999999999999999997532
Q ss_pred cCC----CCCCcccccCC--CCCCcccchHHHHHHH--HhhhhhhccCCeEEecCCccccccccc-----------hhh-
Q 008823 252 TNG----TGSDCYACSFA--NSPIHETYQPRWDYWG--RYMQPVLSKVPIMVVEGNHEYEEQAEN-----------RTF- 311 (552)
Q Consensus 252 ~~G----~~~d~~~~~~~--~~~~~e~y~~~wd~~~--~~l~~l~~~iP~~~v~GNHE~~~~~~~-----------~~f- 311 (552)
..- .+..--...-+ .....+.|+.+|..+. ..++...+..||++.|.+||..++... +.|
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~ei~TLddYR~rya~y~~D~nLqaahA~~Pwi~~WDDHEv~NN~~~~~~~nD~~~~~k~~~ 265 (522)
T COG3540 186 PDEVSLNSWKNVVVTQHKSKEIETLDDYRGRYAYYKTDENLQAAHAAFPWIVQWDDHEVANNWSNSIDENDSRYDEKDFV 265 (522)
T ss_pred ccccccccccccccCCCCCcceeeHHHHhhHHhhhcccHHHHHhhccCCEEEEeccccccccccccccccCCCCChHHHH
Confidence 100 00000000000 0123467888887765 557888899999999999999866321 111
Q ss_pred ----hhhhccc-CCCCCCCCC--CCceeEEeehh----------------------------------------HHHHHH
Q 008823 312 ----VAYTSRF-AFPSKESGS--LSKFYYSFNAG----------------------------------------DQYKWL 344 (552)
Q Consensus 312 ----~~y~~rF-~~P~~~~~~--~~~~yYsfd~G----------------------------------------~Q~~WL 344 (552)
.+++.++ .||...... ....|.+|.|| +|.+||
T Consensus 266 ~r~a~A~qAyyE~mPiR~~~~p~~~~lYR~~tyG~La~~~~LDtR~YR~dqp~~dg~~~~~q~~~~~~~~mlG~~QeqWL 345 (522)
T COG3540 266 LRAAAARQAYYEHMPIRYSSLPTDGRLYRSFTYGPLADLFVLDTRSYRTDQPCGDGNPPNCQAVAGSAATMLGEQQEQWL 345 (522)
T ss_pred HHHHHHHHHHHHhCccccccCCccceeeeeeccccccceeeeehhhhccccccCCCCcchhhhhhCccccchhhHHHHHH
Confidence 2333333 577765433 35899999998 999999
Q ss_pred HHHHhhcccCCCCEEEEEeCCcccc---cCc----------CcccchHHHHHHHHHHHHHcCCc--EEEEccccCceee
Q 008823 345 EEDLANVEREVTPWLVATWHAPWYS---TYK----------AHYREAECMRVAMEDLLYKYGVD--VVFNGHVHAYERS 408 (552)
Q Consensus 345 ~~~L~~~~r~~~pwiIV~~H~P~y~---s~~----------~~~~~~~~~r~~l~~ll~~y~Vd--lvlsGH~H~yeR~ 408 (552)
++.|.+ +++.|+|+..-.|+-- ... ..+.....-|+.|..++...++. ++|.|.+|...-.
T Consensus 346 k~~L~~---SkatWnVia~q~~~~~~~~d~~~a~~~~~a~~D~wdGy~~~RerLl~fi~~~~~~N~V~LtgDvH~~wA~ 421 (522)
T COG3540 346 KRGLGA---SKATWNVIAQQMPLGLVVFDGSPATEGQEANADGWDGYPAGRERLLRFIADRKIRNTVVLTGDVHYSWAH 421 (522)
T ss_pred Hhhhhh---cchhhhhhhhhcceeEeecCCCccccCccccccCcCCCcccHHHHHHHHHhcCCCCcEEEechhHHHHHh
Confidence 999998 6788999988877531 110 11122234488999999999886 8899999975443
No 9
>KOG2679 consensus Purple (tartrate-resistant) acid phosphatase [Posttranslational modification, protein turnover, chaperones]
Probab=99.89 E-value=9.5e-22 Score=190.97 Aligned_cols=194 Identities=22% Similarity=0.346 Sum_probs=127.2
Q ss_pred CCeEEEEEeccCCCCC--hHHH---HHHHH-HCCCCEEEEcCccccccccccCCCCCCcccccCCCCCCcccchHHHH-H
Q 008823 207 YPSRIAIVGDVGLTYN--TTST---VSHMI-SNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWD-Y 279 (552)
Q Consensus 207 ~p~rfaviGD~g~~~~--~~~~---l~~l~-~~~pDfvl~~GDl~Yad~~~~~G~~~d~~~~~~~~~~~~e~y~~~wd-~ 279 (552)
..++|+++||+|.... .... +..|. +.+.||||.+||++|.++..+ .++++.+ .
T Consensus 42 gslsflvvGDwGr~g~~nqs~va~qmg~ige~l~idfvlS~GDNfYd~G~~~-------------------~~Dp~Fq~s 102 (336)
T KOG2679|consen 42 GSLSFLVVGDWGRRGSFNQSQVALQMGEIGEKLDIDFVLSTGDNFYDTGLTS-------------------ENDPRFQDS 102 (336)
T ss_pred CceEEEEEcccccCCchhHHHHHHHHHhHHHhccceEEEecCCcccccCCCC-------------------CCChhHHhh
Confidence 4799999999995432 2222 22233 358999999999999764321 1223322 2
Q ss_pred HHHhhhhhhccCCeEEecCCccccccccchh---hhhhhcccCCCCCC-----------C--CCC--------CceeEEe
Q 008823 280 WGRYMQPVLSKVPIMVVEGNHEYEEQAENRT---FVAYTSRFAFPSKE-----------S--GSL--------SKFYYSF 335 (552)
Q Consensus 280 ~~~~l~~l~~~iP~~~v~GNHE~~~~~~~~~---f~~y~~rF~~P~~~-----------~--~~~--------~~~yYsf 335 (552)
|.+....-..+.||+.+.||||+.++...+- +.....||..|..- . ... ....|+.
T Consensus 103 F~nIYT~pSLQkpWy~vlGNHDyrGnV~AQls~~l~~~d~RW~c~rsf~~~ae~ve~f~v~~~~f~~d~~~~~~~~~ydw 182 (336)
T KOG2679|consen 103 FENIYTAPSLQKPWYSVLGNHDYRGNVEAQLSPVLRKIDKRWICPRSFYVDAEIVEMFFVDTTPFMDDTFTLCTDDVYDW 182 (336)
T ss_pred hhhcccCcccccchhhhccCccccCchhhhhhHHHHhhccceecccHHhhcceeeeeeccccccchhhheeccccccccc
Confidence 2233222224569999999999987754321 23333444433210 0 000 1111221
Q ss_pred ehh--------HHHHHHHHHHhhcccCCCCEEEEEeCCcccccCcCcccchHHHHHHHHHHHHHcCCcEEEEccccCcee
Q 008823 336 NAG--------DQYKWLEEDLANVEREVTPWLVATWHAPWYSTYKAHYREAECMRVAMEDLLYKYGVDVVFNGHVHAYER 407 (552)
Q Consensus 336 d~G--------~Q~~WL~~~L~~~~r~~~pwiIV~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~y~VdlvlsGH~H~yeR 407 (552)
.-- .++.||+..|++ +.++|+||++|||+.+.. +.....|+++.|.|||++++||++++||+|..|.
T Consensus 183 ~~v~PR~~~~~~~l~~le~~L~~---S~a~wkiVvGHh~i~S~~--~HG~T~eL~~~LlPiL~~n~VdlY~nGHDHcLQh 257 (336)
T KOG2679|consen 183 RGVLPRVKYLRALLSWLEVALKA---SRAKWKIVVGHHPIKSAG--HHGPTKELEKQLLPILEANGVDLYINGHDHCLQH 257 (336)
T ss_pred ccCChHHHHHHHHHHHHHHHHHH---hhcceEEEecccceehhh--ccCChHHHHHHHHHHHHhcCCcEEEecchhhhhh
Confidence 100 899999999998 567899999999998863 3456789999999999999999999999999999
Q ss_pred eeecccCccCC-CCCeEEEeCCCCc
Q 008823 408 SNRVYNYTLDP-CGPVHITVGDGGN 431 (552)
Q Consensus 408 ~~pv~n~~~~~-~g~vyiv~G~gG~ 431 (552)
.- ++ .++-|+++|+|..
T Consensus 258 is-------~~e~~iqf~tSGagSk 275 (336)
T KOG2679|consen 258 IS-------SPESGIQFVTSGAGSK 275 (336)
T ss_pred cc-------CCCCCeeEEeeCCccc
Confidence 84 33 4566777776644
No 10
>cd07402 MPP_GpdQ Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain. GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosa
Probab=99.85 E-value=2.9e-20 Score=184.61 Aligned_cols=175 Identities=22% Similarity=0.331 Sum_probs=117.1
Q ss_pred EEEEEeccCCCCCh-------------HHHHHHHHHC--CCCEEEEcCccccccccccCCCCCCcccccCCCCCCcccch
Q 008823 210 RIAIVGDVGLTYNT-------------TSTVSHMISN--RPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQ 274 (552)
Q Consensus 210 rfaviGD~g~~~~~-------------~~~l~~l~~~--~pDfvl~~GDl~Yad~~~~~G~~~d~~~~~~~~~~~~e~y~ 274 (552)
||++++|+|.+... .++++.+.+. +||+||++||+++. +. .
T Consensus 1 r~~~iSDlH~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~d~vi~~GDl~~~------~~------------------~ 56 (240)
T cd07402 1 LLAQISDLHLRADGEGALLGVDTAASLEAVLAHINALHPRPDLVLVTGDLTDD------GS------------------P 56 (240)
T ss_pred CEEEEeCCccCCCCcceecCcCHHHHHHHHHHHHHhcCCCCCEEEECccCCCC------CC------------------H
Confidence 69999999988531 2345555565 89999999999952 22 1
Q ss_pred HHHHHHHHhhhhhhccCCeEEecCCccccccccchhhhhhhcccCCCCCCCCCCCceeEEeehh----------------
Q 008823 275 PRWDYWGRYMQPVLSKVPIMVVEGNHEYEEQAENRTFVAYTSRFAFPSKESGSLSKFYYSFNAG---------------- 338 (552)
Q Consensus 275 ~~wd~~~~~l~~l~~~iP~~~v~GNHE~~~~~~~~~f~~y~~rF~~P~~~~~~~~~~yYsfd~G---------------- 338 (552)
..|+.+.+.++.+ .+|++.++||||.... + ...|..... .....+|+|+.+
T Consensus 57 ~~~~~~~~~l~~~--~~p~~~v~GNHD~~~~-----~---~~~~~~~~~---~~~~~~~~~~~~~~~~i~lds~~~~~~~ 123 (240)
T cd07402 57 ESYERLRELLAAL--PIPVYLLPGNHDDRAA-----M---RAVFPELPP---APGFVQYVVDLGGWRLILLDSSVPGQHG 123 (240)
T ss_pred HHHHHHHHHHhhc--CCCEEEeCCCCCCHHH-----H---HHhhccccc---cccccceeEecCCEEEEEEeCCCCCCcC
Confidence 3455566666665 7999999999998421 1 111110000 111223444332
Q ss_pred -----HHHHHHHHHHhhcccCCCCEEEEEeCCcccccCcCcccc-hHHHHHHHHHHHHHc-CCcEEEEccccCceeeeec
Q 008823 339 -----DQYKWLEEDLANVEREVTPWLVATWHAPWYSTYKAHYRE-AECMRVAMEDLLYKY-GVDVVFNGHVHAYERSNRV 411 (552)
Q Consensus 339 -----~Q~~WL~~~L~~~~r~~~pwiIV~~H~P~y~s~~~~~~~-~~~~r~~l~~ll~~y-~VdlvlsGH~H~yeR~~pv 411 (552)
+|++||++.|++.. ..++|+++|+|++......... ....++.+.+++.++ +|+++|+||+|......
T Consensus 124 ~~~~~~ql~wL~~~L~~~~---~~~~il~~H~pp~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~v~~GH~H~~~~~~-- 198 (240)
T cd07402 124 GELCAAQLDWLEAALAEAP---DKPTLVFLHHPPFPVGIAWMDAIGLRNAEALAAVLARHPNVRAILCGHVHRPIDGS-- 198 (240)
T ss_pred CEECHHHHHHHHHHHHhCC---CCCEEEEECCCCccCCchhhhhhhCCCHHHHHHHHhcCCCeeEEEECCcCchHHeE--
Confidence 79999999999864 2457888899887643211111 111267899999999 99999999999976653
Q ss_pred ccCccCCCCCeEEEeCCCCcc
Q 008823 412 YNYTLDPCGPVHITVGDGGNR 432 (552)
Q Consensus 412 ~n~~~~~~g~vyiv~G~gG~~ 432 (552)
-+|+.++++|+.|..
T Consensus 199 ------~~g~~~~~~gs~~~~ 213 (240)
T cd07402 199 ------WGGIPLLTAPSTCHQ 213 (240)
T ss_pred ------ECCEEEEEcCcceee
Confidence 368899999988774
No 11
>cd07396 MPP_Nbla03831 Homo sapiens Nbla03831 and related proteins, metallophosphatase domain. Nbla03831 (also known as LOC56985) is an uncharacterized Homo sapiens protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=99.80 E-value=6.3e-19 Score=178.59 Aligned_cols=190 Identities=18% Similarity=0.267 Sum_probs=116.8
Q ss_pred eEEEEEeccCCCCCh--------------HHHHHHHHHCCCCEEEEcCccccccccccCCCCCCcccccCCCCCCcccch
Q 008823 209 SRIAIVGDVGLTYNT--------------TSTVSHMISNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQ 274 (552)
Q Consensus 209 ~rfaviGD~g~~~~~--------------~~~l~~l~~~~pDfvl~~GDl~Yad~~~~~G~~~d~~~~~~~~~~~~e~y~ 274 (552)
|||++++|+|..... ..+++.+.+.+||+||++||+++. +.. ..+
T Consensus 1 ~r~~~iSD~H~~~~~~~~~~~~~~~~~~l~~~i~~i~~~~~d~vv~~GDlv~~------~~~---------------~~~ 59 (267)
T cd07396 1 FRFGIIADIQYADEDDTRPRYYRNSLEKLEEAVEEWNRESLDFVVQLGDIIDG------DNA---------------RAE 59 (267)
T ss_pred CeEEEEeccccccCCCcccchHHHhHHHHHHHHHHHHcCCCCEEEECCCeecC------CCc---------------hHH
Confidence 699999999965421 234566666789999999999952 210 012
Q ss_pred HHHHHHHHhhhhhhccCCeEEecCCccccccccchhhh---------hhhc------ccCCCCC-CC---CC--C-----
Q 008823 275 PRWDYWGRYMQPVLSKVPIMVVEGNHEYEEQAENRTFV---------AYTS------RFAFPSK-ES---GS--L----- 328 (552)
Q Consensus 275 ~~wd~~~~~l~~l~~~iP~~~v~GNHE~~~~~~~~~f~---------~y~~------rF~~P~~-~~---~~--~----- 328 (552)
..|+.+.+.+..+ .+|+++++||||........ +. .|.. +|-+-.. .. +. .
T Consensus 60 ~~~~~~~~~l~~l--~~p~~~v~GNHD~~~~~~~~-~~~~~~~~~~~~yysf~~~~~~~i~lds~~~~~~~~~~~~~~~~ 136 (267)
T cd07396 60 EALDAVLAILDRL--KGPVHHVLGNHDLYNPSREY-LLLYTLLGLGAPYYSFSPGGIRFIVLDGYDISALGRPEDTPKAE 136 (267)
T ss_pred HHHHHHHHHHHhc--CCCEEEecCccccccccHhh-hhcccccCCCCceEEEecCCcEEEEEeCCccccccCCCCChhhh
Confidence 3455555555554 58999999999986432211 10 0000 1100000 00 00 0
Q ss_pred -------------CceeEEe--ehh-HHHHHHHHHHhhcccCCCCEEEEEeCCcccccCcCcccchHHHHHHHHHHHHHc
Q 008823 329 -------------SKFYYSF--NAG-DQYKWLEEDLANVEREVTPWLVATWHAPWYSTYKAHYREAECMRVAMEDLLYKY 392 (552)
Q Consensus 329 -------------~~~yYsf--d~G-~Q~~WL~~~L~~~~r~~~pwiIV~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~y 392 (552)
...|..+ ..+ +|++||+++|+++..+ ..++||++|+|++...... ......++.+.++|.++
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~G~l~~~Ql~WL~~~L~~~~~~-~~~viV~~Hhp~~~~~~~~-~~~~~~~~~~~~ll~~~ 214 (267)
T cd07396 137 NADDNSNLGLYLSEPRFVDWNGGIGEEQLQWLRNELQEADAN-GEKVIIFSHFPLHPESTSP-HGLLWNHEEVLSILRAY 214 (267)
T ss_pred hHHHhchhhhhccCccceeccCcCCHHHHHHHHHHHHHHHhc-CCeEEEEEeccCCCCCCCc-cccccCHHHHHHHHHhC
Confidence 0001111 111 8999999999987533 2468999999987654211 11111257788999996
Q ss_pred -CCcEEEEccccCceeeeecccCccCCCCCeEEEeCCCCcc
Q 008823 393 -GVDVVFNGHVHAYERSNRVYNYTLDPCGPVHITVGDGGNR 432 (552)
Q Consensus 393 -~VdlvlsGH~H~yeR~~pv~n~~~~~~g~vyiv~G~gG~~ 432 (552)
+|+++|+||+|.++... .+|+.|+++|+-...
T Consensus 215 ~~V~~v~~GH~H~~~~~~--------~~gi~~~~~~a~~~~ 247 (267)
T cd07396 215 GCVKACISGHDHEGGYAQ--------RHGIHFLTLEGMVET 247 (267)
T ss_pred CCEEEEEcCCcCCCCccc--------cCCeeEEEechhhcC
Confidence 89999999999997552 468999988876543
No 12
>PRK11148 cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional
Probab=99.78 E-value=9.1e-18 Score=170.85 Aligned_cols=183 Identities=19% Similarity=0.290 Sum_probs=106.2
Q ss_pred CCeEEEEEeccCCCC---------C----hHHHHHHHHHC--CCCEEEEcCccccccccccCCCCCCcccccCCCCCCcc
Q 008823 207 YPSRIAIVGDVGLTY---------N----TTSTVSHMISN--RPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHE 271 (552)
Q Consensus 207 ~p~rfaviGD~g~~~---------~----~~~~l~~l~~~--~pDfvl~~GDl~Yad~~~~~G~~~d~~~~~~~~~~~~e 271 (552)
.++||++++|+|... + ..++++++.+. +|||||++||++. +|.
T Consensus 13 ~~~~i~~iSD~Hl~~~~~~~~~~~~~~~~l~~~i~~i~~~~~~~D~vvitGDl~~------~~~---------------- 70 (275)
T PRK11148 13 ARVRILQITDTHLFADEHETLLGVNTWESYQAVLEAIRAQQHEFDLIVATGDLAQ------DHS---------------- 70 (275)
T ss_pred CCEEEEEEcCcccCCCCCCceeccCHHHHHHHHHHHHHhhCCCCCEEEECCCCCC------CCC----------------
Confidence 379999999999742 1 12345555543 6999999999994 222
Q ss_pred cchHHHHHHHHhhhhhhccCCeEEecCCccccccccchhhhhhhcccCCCCCCCCCCCcee--EEee-------hh----
Q 008823 272 TYQPRWDYWGRYMQPVLSKVPIMVVEGNHEYEEQAENRTFVAYTSRFAFPSKESGSLSKFY--YSFN-------AG---- 338 (552)
Q Consensus 272 ~y~~~wd~~~~~l~~l~~~iP~~~v~GNHE~~~~~~~~~f~~y~~rF~~P~~~~~~~~~~y--Ysfd-------~G---- 338 (552)
...++.+.+.++.+ .+|+++++||||..... ..+.....+.....-.....| ...+ .|
T Consensus 71 --~~~~~~~~~~l~~l--~~Pv~~v~GNHD~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~i~Lds~~~g~~~G~l~~ 141 (275)
T PRK11148 71 --SEAYQHFAEGIAPL--RKPCVWLPGNHDFQPAM-----YSALQDAGISPAKHVLIGEHWQILLLDSQVFGVPHGELSE 141 (275)
T ss_pred --HHHHHHHHHHHhhc--CCcEEEeCCCCCChHHH-----HHHHhhcCCCccceEEecCCEEEEEecCCCCCCcCCEeCH
Confidence 12344555556555 68999999999984221 111110011000000000001 1111 12
Q ss_pred HHHHHHHHHHhhcccCCCCEEEEEeCCcccccCcCcccc-hHHHHHHHHHHHHHc-CCcEEEEccccCceeeeecccCcc
Q 008823 339 DQYKWLEEDLANVEREVTPWLVATWHAPWYSTYKAHYRE-AECMRVAMEDLLYKY-GVDVVFNGHVHAYERSNRVYNYTL 416 (552)
Q Consensus 339 ~Q~~WL~~~L~~~~r~~~pwiIV~~H~P~y~s~~~~~~~-~~~~r~~l~~ll~~y-~VdlvlsGH~H~yeR~~pv~n~~~ 416 (552)
+|++||+++|++... .+-+|+++|+|+... ...... ......++.+++++| +|+++|+||+|.....
T Consensus 142 ~ql~wL~~~L~~~~~--~~~vv~~hH~P~~~~-~~~~d~~~l~n~~~l~~ll~~~~~v~~vl~GH~H~~~~~-------- 210 (275)
T PRK11148 142 YQLEWLERKLADAPE--RHTLVLLHHHPLPAG-CAWLDQHSLRNAHELAEVLAKFPNVKAILCGHIHQELDL-------- 210 (275)
T ss_pred HHHHHHHHHHhhCCC--CCeEEEEcCCCCCCC-cchhhccCCCCHHHHHHHHhcCCCceEEEecccChHHhc--------
Confidence 899999999998642 222444445565432 111100 011246899999998 8999999999986543
Q ss_pred CCCCCeEEEeCCCCc
Q 008823 417 DPCGPVHITVGDGGN 431 (552)
Q Consensus 417 ~~~g~vyiv~G~gG~ 431 (552)
.-.|+.++++++.+.
T Consensus 211 ~~~gi~~~~~ps~~~ 225 (275)
T PRK11148 211 DWNGRRLLATPSTCV 225 (275)
T ss_pred eECCEEEEEcCCCcC
Confidence 235887887776654
No 13
>cd07399 MPP_YvnB Bacillus subtilis YvnB and related proteins, metallophosphatase domain. YvnB (BSU35040) is an uncharacterized Bacillus subtilis protein with a metallophosphatase domain. This family includes bacterial and eukaryotic proteins similar to YvnB. YvnB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for
Probab=99.76 E-value=5.4e-18 Score=166.27 Aligned_cols=150 Identities=19% Similarity=0.249 Sum_probs=106.0
Q ss_pred eEEEEEeccCCCCCh-----HH----HHHHHHHCCCCEEEEcCccccccccccCCCCCCcccccCCCCCCcccchHHHHH
Q 008823 209 SRIAIVGDVGLTYNT-----TS----TVSHMISNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDY 279 (552)
Q Consensus 209 ~rfaviGD~g~~~~~-----~~----~l~~l~~~~pDfvl~~GDl~Yad~~~~~G~~~d~~~~~~~~~~~~e~y~~~wd~ 279 (552)
|||++++|+|..... .. +++.+.+.+||+|+++||+++. +. ...+|+.
T Consensus 1 f~~~~~~D~q~~~~~~~~~~~~~~~~i~~~~~~~~~d~iv~~GDl~~~------~~-----------------~~~~~~~ 57 (214)
T cd07399 1 FTLAVLPDTQYYTESYPEVFDAQTDWIVDNAEALNIAFVLHLGDIVDD------GD-----------------NDAEWEA 57 (214)
T ss_pred CEEEEecCCCcCCcCCHHHHHHHHHHHHHHHHHcCCCEEEECCCccCC------CC-----------------CHHHHHH
Confidence 589999999975431 12 2333445689999999999952 21 0246888
Q ss_pred HHHhhhhhh-ccCCeEEecCCccccccccchhhhhhhcccCCCCCCCCCCCceeEEeehhHHHHHHHHHHhhcccCCCCE
Q 008823 280 WGRYMQPVL-SKVPIMVVEGNHEYEEQAENRTFVAYTSRFAFPSKESGSLSKFYYSFNAGDQYKWLEEDLANVEREVTPW 358 (552)
Q Consensus 280 ~~~~l~~l~-~~iP~~~v~GNHE~~~~~~~~~f~~y~~rF~~P~~~~~~~~~~yYsfd~G~Q~~WL~~~L~~~~r~~~pw 358 (552)
+.+.++.+. ..+|+++++||||.... .. +.. -.+|++||++.|++.. ..+
T Consensus 58 ~~~~~~~l~~~~~p~~~~~GNHD~~~~---------ld-~~~----------------~~~ql~WL~~~L~~~~---~~~ 108 (214)
T cd07399 58 ADKAFARLDKAGIPYSVLAGNHDLVLA---------LE-FGP----------------RDEVLQWANEVLKKHP---DRP 108 (214)
T ss_pred HHHHHHHHHHcCCcEEEECCCCcchhh---------CC-CCC----------------CHHHHHHHHHHHHHCC---CCC
Confidence 888888886 67999999999994210 00 000 0289999999999853 245
Q ss_pred EEEEeCCcccccCcCcccc-----hHHHHHHHHHHHHHc-CCcEEEEccccCceeeee
Q 008823 359 LVATWHAPWYSTYKAHYRE-----AECMRVAMEDLLYKY-GVDVVFNGHVHAYERSNR 410 (552)
Q Consensus 359 iIV~~H~P~y~s~~~~~~~-----~~~~r~~l~~ll~~y-~VdlvlsGH~H~yeR~~p 410 (552)
+|+++|+|++......... ....++.|++++++| +|+++|+||+|.+.+...
T Consensus 109 ~iv~~H~p~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~V~~v~~GH~H~~~~~~~ 166 (214)
T cd07399 109 AILTTHAYLNCDDSRPDSIDYDSDVNDGQQIWDKLVKKNDNVFMVLSGHVHGAGRTTL 166 (214)
T ss_pred EEEEecccccCCCCcCcccccccccccHHHHHHHHHhCCCCEEEEEccccCCCceEEE
Confidence 8999999998654221111 123356788999999 799999999999988753
No 14
>cd07401 MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metallophosphatase domain. TMEM62 (transmembrane protein 62) is an uncharacterized Homo sapiens transmembrane protein with an N-terminal metallophosphatase domain. TMEM62 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=99.75 E-value=1.8e-17 Score=166.93 Aligned_cols=180 Identities=19% Similarity=0.236 Sum_probs=110.0
Q ss_pred EEEEeccCCCCChH--------HHHHHHHHCCCCEEEEcCccccccccccCCCCCCcccccCCCCCCcccchHHHHHHHH
Q 008823 211 IAIVGDVGLTYNTT--------STVSHMISNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDYWGR 282 (552)
Q Consensus 211 faviGD~g~~~~~~--------~~l~~l~~~~pDfvl~~GDl~Yad~~~~~G~~~d~~~~~~~~~~~~e~y~~~wd~~~~ 282 (552)
|++++|+|.+.... .+++.+.+.+||+||++||++.... ..+. -...++.+|+.|.+
T Consensus 2 ~~~iSDlH~g~~~~~~~~~~~~~~~~~i~~~~pd~i~~~GD~~d~~~--~~~~-------------~~~~~~~~~~~~~~ 66 (256)
T cd07401 2 FVHISDIHVSSFHPPNRAQDETFCSNFIDVIKPALVLATGDLTDNKT--GNKL-------------PSYQYQEEWQKYYN 66 (256)
T ss_pred EEEecccccCCcCchhhhhHHHHHHHHHHhhCCCEEEEccccccccc--cCCC-------------cccccHHHHHHHHH
Confidence 78999999875421 1344556679999999999994211 1110 01123567888887
Q ss_pred hhhhhh--ccCCeEEecCCccccccccch----hhhhhhcccCCCCC--------C--------C----CCCCceeEEee
Q 008823 283 YMQPVL--SKVPIMVVEGNHEYEEQAENR----TFVAYTSRFAFPSK--------E--------S----GSLSKFYYSFN 336 (552)
Q Consensus 283 ~l~~l~--~~iP~~~v~GNHE~~~~~~~~----~f~~y~~rF~~P~~--------~--------~----~~~~~~yYsfd 336 (552)
.+.... ...|++.++||||+.+..... .|..|...+..+.. + + +.....++.-.
T Consensus 67 ~~~~~~~~~~~p~~~v~GNHD~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~I~Ldt~~~~~~~~~~~~~g~ 146 (256)
T cd07401 67 ILKESSVINKEKWFDIRGNHDLFNIPSLDSENNYYRKYSATGRDGSFSFSHTTRFGNYSFIGVDPTLFPGPKRPFNFFGS 146 (256)
T ss_pred HHHHhCCCCcceEEEeCCCCCcCCCCCccchhhHHHHhheecCCCccceEEEecCCCEEEEEEcCccCCCCCCCCceecc
Confidence 765543 268999999999996432211 12222211111100 0 0 00000011111
Q ss_pred hh-HHHHHHHHHHhhcccCCCCEEEEEeCCcccccCcCcccchHHHHHHHHHHHHHcCCcEEEEccccCceeeeec
Q 008823 337 AG-DQYKWLEEDLANVEREVTPWLVATWHAPWYSTYKAHYREAECMRVAMEDLLYKYGVDVVFNGHVHAYERSNRV 411 (552)
Q Consensus 337 ~G-~Q~~WL~~~L~~~~r~~~pwiIV~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~y~VdlvlsGH~H~yeR~~pv 411 (552)
.. +|++||+++|++.. +.+|+||++|+|++...... . ...+ .+.++|++++|+++|+||+|.+++..|+
T Consensus 147 l~~~ql~wL~~~L~~~~--~~~~~IV~~HhP~~~~~~~~-~--~~~~-~~~~ll~~~~v~~vl~GH~H~~~~~~p~ 216 (256)
T cd07401 147 LDKKLLDRLEKELEKST--NSNYTIWFGHYPTSTIISPS-A--KSSS-KFKDLLKKYNVTAYLCGHLHPLGGLEPV 216 (256)
T ss_pred CCHHHHHHHHHHHHhcc--cCCeEEEEEcccchhccCCC-c--chhH-HHHHHHHhcCCcEEEeCCccCCCcceee
Confidence 11 99999999999764 24589999999986532211 1 1122 3899999999999999999999996665
No 15
>PF00149 Metallophos: Calcineurin-like phosphoesterase; InterPro: IPR004843 This domain is found in a diverse range of phosphoesterases [], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases, as well as nucleases such as bacterial SbcD or yeast MRE11. The most conserved regions in this domain centre around the metal chelating residues.; GO: 0016787 hydrolase activity; PDB: 2IAE_C 3DW8_F 3FGA_C 2IE4_C 2NYM_C 2NYL_C 3K7V_C 2NPP_C 2IE3_C 3K7W_C ....
Probab=99.70 E-value=6.3e-17 Score=147.68 Aligned_cols=174 Identities=25% Similarity=0.361 Sum_probs=96.1
Q ss_pred eEEEEEeccCCCCChH-----HHHHHHHHCCCCEEEEcCccccccccccCCCCCCcccccCCCCCCcccchHHHHHHH-H
Q 008823 209 SRIAIVGDVGLTYNTT-----STVSHMISNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDYWG-R 282 (552)
Q Consensus 209 ~rfaviGD~g~~~~~~-----~~l~~l~~~~pDfvl~~GDl~Yad~~~~~G~~~d~~~~~~~~~~~~e~y~~~wd~~~-~ 282 (552)
+||+++||+|...... .......+.++|+||++||+++.. .. ...+.... .
T Consensus 1 ~ri~~isD~H~~~~~~~~~~~~~~~~~~~~~~d~ii~~GD~~~~~------~~-----------------~~~~~~~~~~ 57 (200)
T PF00149_consen 1 MRILVISDLHGGYDDDSDAFRKLDEIAAENKPDFIIFLGDLVDGG------NP-----------------SEEWRAQFWF 57 (200)
T ss_dssp EEEEEEEBBTTTHHHHCHHHHHHHHHHHHTTTSEEEEESTSSSSS------SH-----------------HHHHHHHHHH
T ss_pred CeEEEEcCCCCCCcchhHHHHHHHHHhccCCCCEEEeeccccccc------cc-----------------cccchhhhcc
Confidence 6999999999885533 223334567999999999999742 10 11111111 1
Q ss_pred hhhhhhccCCeEEecCCccccccccchhhhhhhcccC-CCCC--CCCCCC-------ceeEEe-ehh-------HHHHHH
Q 008823 283 YMQPVLSKVPIMVVEGNHEYEEQAENRTFVAYTSRFA-FPSK--ESGSLS-------KFYYSF-NAG-------DQYKWL 344 (552)
Q Consensus 283 ~l~~l~~~iP~~~v~GNHE~~~~~~~~~f~~y~~rF~-~P~~--~~~~~~-------~~yYsf-d~G-------~Q~~WL 344 (552)
........+|+++++||||+................. .... ...... ...... ... .+..|+
T Consensus 58 ~~~~~~~~~~~~~~~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (200)
T PF00149_consen 58 FIRLLNPKIPVYFILGNHDYYSGNSFYGFYDYQFEDYYGNYNYYYSYFNNKVIFDNDNFWFNSGNNEYPDYGMEAQQEWW 137 (200)
T ss_dssp HHHHHHTTTTEEEEE-TTSSHHHHHHHHHHHHHHSSEEECSSEEECTESSEEEEEETTEEEEEHCCHTHHSEHHHHHHHH
T ss_pred chhhhhccccccccccccccceeccccccccccccccccccccccccCcceeeecccccccccccccccccccccchhcc
Confidence 3344567899999999999974322111111111000 0000 000000 000000 000 222232
Q ss_pred HHHHhhcccCCCCEEEEEeCCcccccCcCccc--chHHHHHHHHHHHHHcCCcEEEEccccCc
Q 008823 345 EEDLANVEREVTPWLVATWHAPWYSTYKAHYR--EAECMRVAMEDLLYKYGVDVVFNGHVHAY 405 (552)
Q Consensus 345 ~~~L~~~~r~~~pwiIV~~H~P~y~s~~~~~~--~~~~~r~~l~~ll~~y~VdlvlsGH~H~y 405 (552)
...+....+...+|+||++|+|++........ .....+..++.++.+++|+++|+||+|.|
T Consensus 138 ~~~~~~~~~~~~~~~iv~~H~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~GH~H~~ 200 (200)
T PF00149_consen 138 LWLLLLLEAKNDDPVIVFTHHPPYSSSSDSSSYGNESKGREALEELLKKYNVDLVLSGHTHRY 200 (200)
T ss_dssp HHHHHHHHEEEESEEEEEESSSSSTTSSSTHHHSSEEEHHHHHHHHHHHTTCSEEEEESSSSE
T ss_pred cccccccccccccceeEEEecCCCCccccccccchhhccHHHHHHHHhhCCCCEEEeCceecC
Confidence 22222222244678999999999986543211 01235788999999999999999999987
No 16
>cd07383 MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain. DCR2 phosphatase (Dosage-dependent Cell Cycle Regulator 2) functions together with DCR1 (Gid8) in a common pathway to accelerate initiation of DNA replication in Saccharomyces cerevisiae. Genetic analysis suggests that DCR1 functions upstream of DCR2. DCR2 interacts with and dephosphorylates Sic1, an inhibitor of mitotic cyclin/cyclin-dependent kinase complexes, which may serve to trigger the initiation of cell division. DCR2 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAP
Probab=99.62 E-value=3.3e-15 Score=144.74 Aligned_cols=150 Identities=21% Similarity=0.289 Sum_probs=95.5
Q ss_pred CeEEEEEeccCCCCCh------------HHHHHH-HHHCCCCEEEEcCccccccccccCCCCCCcccccCCCCCCcccch
Q 008823 208 PSRIAIVGDVGLTYNT------------TSTVSH-MISNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQ 274 (552)
Q Consensus 208 p~rfaviGD~g~~~~~------------~~~l~~-l~~~~pDfvl~~GDl~Yad~~~~~G~~~d~~~~~~~~~~~~e~y~ 274 (552)
.+||++++|+|..... ...+++ +.+.+||+||++||+++... . . .
T Consensus 2 ~~ki~~isDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~GDl~~~~~-----~---------------~--~ 59 (199)
T cd07383 2 KFKILQFADLHFGEGEGTCEGCEADLKTVAFIERVLDAEKPDLVVLTGDLITGEN-----T---------------N--D 59 (199)
T ss_pred ceEEEEEeeecccCCCCCCCcchhhHHHHHHHHHHHhhcCCCEEEECCccccCCC-----C---------------c--h
Confidence 5899999999986542 112333 33468999999999996421 0 0 0
Q ss_pred HHHHHHHHhhhhhh-ccCCeEEecCCccccccccchhhhhhhcccCCCCCCCCCCCceeEEeehhHHHHHHHHHHhhcc-
Q 008823 275 PRWDYWGRYMQPVL-SKVPIMVVEGNHEYEEQAENRTFVAYTSRFAFPSKESGSLSKFYYSFNAGDQYKWLEEDLANVE- 352 (552)
Q Consensus 275 ~~wd~~~~~l~~l~-~~iP~~~v~GNHE~~~~~~~~~f~~y~~rF~~P~~~~~~~~~~yYsfd~G~Q~~WL~~~L~~~~- 352 (552)
..+..+.++++.+. ..+|+++++||||... .. . ..|++||+++|++..
T Consensus 60 ~~~~~~~~~~~~l~~~~~p~~~~~GNHD~~g------------~l----------~--------~~ql~wL~~~l~~~~~ 109 (199)
T cd07383 60 NSTSALDKAVSPMIDRKIPWAATFGNHDGYD------------WI----------R--------PSQIEWFKETSAALKK 109 (199)
T ss_pred HHHHHHHHHHHHHHHcCCCEEEECccCCCCC------------CC----------C--------HHHHHHHHHHHHHHhh
Confidence 12334445555543 3799999999999210 00 0 089999999999863
Q ss_pred -cCCCCEEEEEeCCcccccCcC---------cccchH---HHHH-HHHHHHHHcCCcEEEEccccCceeee
Q 008823 353 -REVTPWLVATWHAPWYSTYKA---------HYREAE---CMRV-AMEDLLYKYGVDVVFNGHVHAYERSN 409 (552)
Q Consensus 353 -r~~~pwiIV~~H~P~y~s~~~---------~~~~~~---~~r~-~l~~ll~~y~VdlvlsGH~H~yeR~~ 409 (552)
+....+.++++|+|+...... ...+.. .... .+..+....+|+++|+||+|.++...
T Consensus 110 ~~~~~~~~l~f~H~P~~~~~~~~~~~~~~~g~~~d~~~~~~~~~~~~~~~~~~~~v~~v~~GH~H~~~~~~ 180 (199)
T cd07383 110 KYGKPIPSLAFFHIPLPEYREVWEGKGKVPGINNEKVCCPKINSGLFKALLERGDVKGVFCGHDHGNDFCG 180 (199)
T ss_pred ccCCCCcceEEEecChHHHHhhhcccCCCCccCCcccCCCcCCcHHHHHHHHcCCeEEEEeCCCCCcceec
Confidence 223457899999997653211 111100 1122 34444566799999999999987664
No 17
>PF14008 Metallophos_C: Iron/zinc purple acid phosphatase-like protein C; PDB: 3KBP_B 1KBP_B 4KBP_C 2QFP_B 2QFR_A 1XZW_B.
Probab=99.57 E-value=3e-15 Score=117.62 Aligned_cols=43 Identities=40% Similarity=0.678 Sum_probs=32.4
Q ss_pred CCCCCCcceecCCccEEEEEEecCCceEEEEEEecCCceeeeEEE
Q 008823 479 DRQPDYSAFRESSFGHGILEVKNETHALWTWHRNQDFYEAAGDQI 523 (552)
Q Consensus 479 ~~~p~wsa~~~~~~G~~~l~v~n~t~l~~~~~~~~d~~~~v~D~~ 523 (552)
.++|+|+++|..+|||++|+|.|+|||+|||+++.|+ +|+|+|
T Consensus 20 ~~~~~wsa~r~~~~Gy~~l~v~N~T~l~~e~i~~~~g--~v~D~f 62 (62)
T PF14008_consen 20 YPPPEWSAFRDSEYGYGRLTVANATHLHWEFIRSDDG--SVLDEF 62 (62)
T ss_dssp SS--TTEEEEE---EEEEEEE-SSSEEEEEEEETTS---T-CEE-
T ss_pred CCCCCeeeeeccccCEEEEEEEcCCeEEEEEEECCCC--cEecCC
Confidence 5679999999999999999999999999999999887 899997
No 18
>cd00842 MPP_ASMase acid sphingomyelinase and related proteins, metallophosphatase domain. Acid sphingomyelinase (ASMase) is a ubiquitously expressed phosphodiesterase which hydrolyzes sphingomyelin in acid pH conditions to form ceramide, a bioactive second messenger, as part of the sphingomyelin signaling pathway. ASMase is localized at the noncytosolic leaflet of biomembranes (for example the luminal leaflet of endosomes, lysosomes and phagosomes, and the extracellular leaflet of plasma membranes). ASMase-deficient humans develop Niemann-Pick disease. This disease is characterized by lysosomal storage of sphingomyelin in all tissues. Although ASMase-deficient mice are resistant to stress-induced apoptosis, they have greater susceptibility to bacterial infection. The latter correlates with defective phagolysosomal fusion and antibacterial killing activity in ASMase-deficient macrophages. ASMase belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but
Probab=99.57 E-value=1.7e-14 Score=148.31 Aligned_cols=175 Identities=21% Similarity=0.265 Sum_probs=109.7
Q ss_pred EEeccCCCCC---hHHHHHHHHHC--CCCEEEEcCccccccccccCCCCCCcccccCCCCCCcccchH--HHHHHHHhhh
Q 008823 213 IVGDVGLTYN---TTSTVSHMISN--RPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQP--RWDYWGRYMQ 285 (552)
Q Consensus 213 viGD~g~~~~---~~~~l~~l~~~--~pDfvl~~GDl~Yad~~~~~G~~~d~~~~~~~~~~~~e~y~~--~wd~~~~~l~ 285 (552)
-+|+.+.... ..++++.+.+. +|||||++||++..+.+. . ..+ ... .+..+.+.++
T Consensus 42 ~~G~~~CD~p~~l~~s~l~~i~~~~~~~dfii~tGD~v~h~~~~--~--------------~~~-~~~~~~~~~~~~~l~ 104 (296)
T cd00842 42 PWGDYGCDSPWRLVESALEAIKKNHPKPDFILWTGDLVRHDVDE--Q--------------TPE-TLVLISISNLTSLLK 104 (296)
T ss_pred CCcCcCCCCcHHHHHHHHHHHHHhCCCCCEEEEcCCCCCCCchh--h--------------chh-HHHHHHHHHHHHHHH
Confidence 3566664432 24567777776 899999999999754220 0 000 011 2455666677
Q ss_pred hhhccCCeEEecCCcccccccc-------chhhhhhhcccC--CCCCCC-CCCCceeEEee-hh----------------
Q 008823 286 PVLSKVPIMVVEGNHEYEEQAE-------NRTFVAYTSRFA--FPSKES-GSLSKFYYSFN-AG---------------- 338 (552)
Q Consensus 286 ~l~~~iP~~~v~GNHE~~~~~~-------~~~f~~y~~rF~--~P~~~~-~~~~~~yYsfd-~G---------------- 338 (552)
.....+|+++++||||...... ...+..+...|. +|.... ....+.||++. .+
T Consensus 105 ~~~~~~pv~~~~GNHD~~p~~~~~~~~~~~~~~~~~~~~w~~~l~~~~~~~~~~ggYY~~~~~~~l~vI~Lnt~~~~~~~ 184 (296)
T cd00842 105 KAFPDTPVYPALGNHDSYPVNQFPPNNSPSWLYDALAELWKSWLPEEAEETFKKGGYYSVPVKPGLRVISLNTNLYYKKN 184 (296)
T ss_pred HhCCCCCEEEcCCCCCCCcccccCCcccccHHHHHHHHHHHhhcCHHHHHHhhcceEEEEEcCCCeEEEEEeCccccccC
Confidence 7778899999999999975321 111222222221 221100 01123455554 22
Q ss_pred ------------HHHHHHHHHHhhcccCCCCEEEEEeCCcccccCcCcccchHHHHHHHHHHHHHcC--CcEEEEccccC
Q 008823 339 ------------DQYKWLEEDLANVEREVTPWLVATWHAPWYSTYKAHYREAECMRVAMEDLLYKYG--VDVVFNGHVHA 404 (552)
Q Consensus 339 ------------~Q~~WL~~~L~~~~r~~~pwiIV~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~y~--VdlvlsGH~H~ 404 (552)
+|++||+++|++++++. ..+||++|+|+....... .....+.+.+++.+|. |.++|+||+|.
T Consensus 185 ~~~~~~~~~~~~~Ql~WL~~~L~~a~~~~-~~v~I~~HiPp~~~~~~~---~~~~~~~~~~ii~~y~~~i~~~~~GH~H~ 260 (296)
T cd00842 185 FWLLGSNETDPAGQLQWLEDELQEAEQAG-EKVWIIGHIPPGVNSYDT---LENWSERYLQIINRYSDTIAGQFFGHTHR 260 (296)
T ss_pred hhhhccCCCCHHHHHHHHHHHHHHHHHCC-CeEEEEeccCCCCccccc---chHHHHHHHHHHHHHHHhhheeeeccccc
Confidence 69999999999976443 347888999987643221 1345788999999997 77899999999
Q ss_pred ceee
Q 008823 405 YERS 408 (552)
Q Consensus 405 yeR~ 408 (552)
.+..
T Consensus 261 d~~~ 264 (296)
T cd00842 261 DEFR 264 (296)
T ss_pred ceEE
Confidence 7765
No 19
>cd07393 MPP_DR1119 Deinococcus radiodurans DR1119 and related proteins, metallophosphatase domain. DR1119 is an uncharacterized Deinococcus radiodurans protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordinat
Probab=99.51 E-value=1.9e-13 Score=135.73 Aligned_cols=80 Identities=20% Similarity=0.303 Sum_probs=59.1
Q ss_pred HHHHHHHHHHhhcccCC-CCEEEEEeCCcccccCcCcccchHHHHHHHHHHHHHcCCcEEEEccccCceeeeecccCccC
Q 008823 339 DQYKWLEEDLANVEREV-TPWLVATWHAPWYSTYKAHYREAECMRVAMEDLLYKYGVDVVFNGHVHAYERSNRVYNYTLD 417 (552)
Q Consensus 339 ~Q~~WL~~~L~~~~r~~-~pwiIV~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~y~VdlvlsGH~H~yeR~~pv~n~~~~ 417 (552)
+|++||++.|+++.... ..++|++.|+|++.... . ...+..++.+++|+++|+||+|.+++..|+.. .
T Consensus 146 ~~l~~l~~~L~~~~~~~~~~~~i~~~H~p~~~~~~----~----~~~~~~~~~~~~v~~vl~GH~H~~~~~~~~~~---~ 214 (232)
T cd07393 146 RELERLELSLKAAKKREKEKIKIVMLHYPPANENG----D----DSPISKLIEEYGVDICVYGHLHGVGRDRAING---E 214 (232)
T ss_pred HHHHHHHHHHHHHHhCCCCCCEEEEECCCCcCCCC----C----HHHHHHHHHHcCCCEEEECCCCCCcccccccc---e
Confidence 79999999999864322 24789999999876432 1 23567888999999999999999998776532 2
Q ss_pred CCCCeEEEeCCC
Q 008823 418 PCGPVHITVGDG 429 (552)
Q Consensus 418 ~~g~vyiv~G~g 429 (552)
-+|+.|.++.++
T Consensus 215 ~~gi~~~~~~~~ 226 (232)
T cd07393 215 RGGIRYQLVSAD 226 (232)
T ss_pred ECCEEEEEEcch
Confidence 357777766543
No 20
>TIGR03729 acc_ester putative phosphoesterase. Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system.
Probab=99.50 E-value=2.4e-13 Score=135.54 Aligned_cols=168 Identities=17% Similarity=0.230 Sum_probs=95.4
Q ss_pred EEEEEeccCCCCCh---H----HHHHHHHHCCCCEEEEcCccccccccccCCCCCCcccccCCCCCCcccchHHHHHHHH
Q 008823 210 RIAIVGDVGLTYNT---T----STVSHMISNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDYWGR 282 (552)
Q Consensus 210 rfaviGD~g~~~~~---~----~~l~~l~~~~pDfvl~~GDl~Yad~~~~~G~~~d~~~~~~~~~~~~e~y~~~wd~~~~ 282 (552)
||++++|+|..... . ..++.+.+.++|+||++||++.. . .....+.+
T Consensus 1 ki~~iSDlH~~~~~~~~~~~l~~~~~~~~~~~~d~vv~~GDl~~~------~--------------------~~~~~~~~ 54 (239)
T TIGR03729 1 KIAFSSDLHIDLNHFDTEEMLETLAQYLKKQKIDHLHIAGDISND------F--------------------QRSLPFIE 54 (239)
T ss_pred CEEEEEeecCCCCCCCHHHHHHHHHHHHHhcCCCEEEECCccccc------h--------------------hhHHHHHH
Confidence 58999999965322 2 24555666789999999999931 0 01112333
Q ss_pred hhhhhhccCCeEEecCCccccccccchhhhhhh------ccc-CCCCCCCC-CCCceeEEe-------------------
Q 008823 283 YMQPVLSKVPIMVVEGNHEYEEQAENRTFVAYT------SRF-AFPSKESG-SLSKFYYSF------------------- 335 (552)
Q Consensus 283 ~l~~l~~~iP~~~v~GNHE~~~~~~~~~f~~y~------~rF-~~P~~~~~-~~~~~yYsf------------------- 335 (552)
.+..+ ..+|++.++||||+........+..+. ..+ .++.+... -..+.|+.|
T Consensus 55 ~l~~~-~~~pv~~v~GNHD~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ig~~gw~d~~~~~~~~~~~~~~~~~d~~ 133 (239)
T TIGR03729 55 KLQEL-KGIKVTFNAGNHDMLKDLTYEEIESNDSPLYLHNRFIDIPNTQWRIIGNNGWYDYSFSNDKTSKEILRWKKSFW 133 (239)
T ss_pred HHHHh-cCCcEEEECCCCCCCCCCCHHHHHhccchhhhcccccccCCCceEEEeeccceecccccccCHHHHHHhhhcEE
Confidence 33332 468999999999985221111111100 000 00000000 011122221
Q ss_pred -e--------hh----HHHHHHHHHHhhcccCCCCEEEEEeCCcccccCc------CcccchHH--HHHHHHHHHHHcCC
Q 008823 336 -N--------AG----DQYKWLEEDLANVEREVTPWLVATWHAPWYSTYK------AHYREAEC--MRVAMEDLLYKYGV 394 (552)
Q Consensus 336 -d--------~G----~Q~~WL~~~L~~~~r~~~pwiIV~~H~P~y~s~~------~~~~~~~~--~r~~l~~ll~~y~V 394 (552)
+ .+ +|++||++.|++.... .+|++.|+|+..... ..+..... -...+++++++++|
T Consensus 134 ~~~~~~~~~~~~~~~~~~l~~l~~~l~~~~~~---~~ivvtH~pP~~~~~~~~~~~~~~~~~~~~~~s~~l~~li~~~~v 210 (239)
T TIGR03729 134 FDRRIKRPMSDPERTAIVLKQLKKQLNQLDNK---QVIFVTHFVPHRDFIYVPMDHRRFDMFNAFLGSQHFGQLLVKYEI 210 (239)
T ss_pred eecccCCCCChHHHHHHHHHHHHHHHHhcCCC---CEEEEEcccchHHHhcCCCCCcchhhhhhccChHHHHHHHHHhCC
Confidence 1 11 8999999999876432 378888887754211 11111111 13788999999999
Q ss_pred cEEEEccccCcee
Q 008823 395 DVVFNGHVHAYER 407 (552)
Q Consensus 395 dlvlsGH~H~yeR 407 (552)
+++|+||+|.-..
T Consensus 211 ~~~i~GH~H~~~~ 223 (239)
T TIGR03729 211 KDVIFGHLHRRFG 223 (239)
T ss_pred CEEEECCccCCCC
Confidence 9999999998753
No 21
>cd07400 MPP_YydB Bacillus subtilis YydB and related proteins, metallophosphatase domain. YydB (BSU40220) is an uncharacterized Bacillus subtilis protein that belongs to the following Bacillus subtilis gene cluster yydB-yydC-yydD-yydG-yydH-yydI-yydJ. YydB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productiv
Probab=99.50 E-value=2.2e-13 Score=124.70 Aligned_cols=132 Identities=23% Similarity=0.338 Sum_probs=91.0
Q ss_pred EEEEeccCCCCChH-----------HHHHHHHHCCCCEEEEcCccccccccccCCCCCCcccccCCCCCCcccchHHHHH
Q 008823 211 IAIVGDVGLTYNTT-----------STVSHMISNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDY 279 (552)
Q Consensus 211 faviGD~g~~~~~~-----------~~l~~l~~~~pDfvl~~GDl~Yad~~~~~G~~~d~~~~~~~~~~~~e~y~~~wd~ 279 (552)
|++++|+|.+.... ..++.+.+.++|+|+++||+++. +. +..|+.
T Consensus 1 il~isD~Hl~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GDl~~~------~~------------------~~~~~~ 56 (144)
T cd07400 1 ILHLSDLHFGPERKPELLALLSLLDRLLAEIKALDPDLVVITGDLTQR------GL------------------PEEFEE 56 (144)
T ss_pred CeEeCccCCCCCcchhHHHHHHHHHHHHHHHhccCCCEEEECCCCCCC------CC------------------HHHHHH
Confidence 57899999875421 12334456789999999999963 22 245666
Q ss_pred HHHhhhhhhcc-CCeEEecCCccccccccchhhhhhhcccCCCCCCCCCCCceeEEeehhHHHHHHHHHHhhcccCCCCE
Q 008823 280 WGRYMQPVLSK-VPIMVVEGNHEYEEQAENRTFVAYTSRFAFPSKESGSLSKFYYSFNAGDQYKWLEEDLANVEREVTPW 358 (552)
Q Consensus 280 ~~~~l~~l~~~-iP~~~v~GNHE~~~~~~~~~f~~y~~rF~~P~~~~~~~~~~yYsfd~G~Q~~WL~~~L~~~~r~~~pw 358 (552)
+.++++.+... +|++.++||||.
T Consensus 57 ~~~~~~~l~~~~~~~~~v~GNHD~-------------------------------------------------------- 80 (144)
T cd07400 57 AREFLDALPAPLEPVLVVPGNHDV-------------------------------------------------------- 80 (144)
T ss_pred HHHHHHHccccCCcEEEeCCCCeE--------------------------------------------------------
Confidence 77777777543 699999999995
Q ss_pred EEEEeCCcccccCcCcccchHHHHHHHHHHHHHcCCcEEEEccccCceeeeecccCccCCCCCeEEEeCC
Q 008823 359 LVATWHAPWYSTYKAHYREAECMRVAMEDLLYKYGVDVVFNGHVHAYERSNRVYNYTLDPCGPVHITVGD 428 (552)
Q Consensus 359 iIV~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~y~VdlvlsGH~H~yeR~~pv~n~~~~~~g~vyiv~G~ 428 (552)
|+++|+|++......... ...++.+.+++.+++++++++||+|......-. ...++++++.+|+
T Consensus 81 -iv~~Hhp~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~l~GH~H~~~~~~~~----~~~~~~~~~~aGs 144 (144)
T cd07400 81 -IVVLHHPLVPPPGSGRER-LLDAGDALKLLAEAGVDLVLHGHKHVPYVGNIS----NAGGGLVVIGAGT 144 (144)
T ss_pred -EEEecCCCCCCCcccccc-CCCHHHHHHHHHHcCCCEEEECCCCCcCeeecc----CCCCCEEEEecCC
Confidence 778888877653321111 113567889999999999999999997655311 1245667777664
No 22
>cd07404 MPP_MS158 Microscilla MS158 and related proteins, metallophosphatase domain. MS158 is an uncharacterized Microscilla protein with a metallophosphatase domain. Microscilla proteins MS152, and MS153 are also included in this family. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is t
Probab=99.43 E-value=1.7e-13 Score=128.79 Aligned_cols=144 Identities=20% Similarity=0.285 Sum_probs=90.7
Q ss_pred EEEEeccCCCCChHHHH--HHHHHCCCCEEEEcCccccccccccCCCCCCcccccCCCCCCcccchHHHHHHHHhhhhhh
Q 008823 211 IAIVGDVGLTYNTTSTV--SHMISNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDYWGRYMQPVL 288 (552)
Q Consensus 211 faviGD~g~~~~~~~~l--~~l~~~~pDfvl~~GDl~Yad~~~~~G~~~d~~~~~~~~~~~~e~y~~~wd~~~~~l~~l~ 288 (552)
|+++||+|......... +.+.+.++|+++++||+++. +. ...+ ........
T Consensus 1 ~~~iSDlH~~~~~~~~~~~~~~~~~~~d~li~~GDi~~~------~~------------------~~~~---~~~~~~~~ 53 (166)
T cd07404 1 IQYLSDLHLEFEDNLADLLNFPIAPDADILVLAGDIGYL------TD------------------APRF---APLLLALK 53 (166)
T ss_pred CceEccccccCccccccccccCCCCCCCEEEECCCCCCC------cc------------------hHHH---HHHHHhhc
Confidence 57899999875433222 22345689999999999852 11 0112 11223334
Q ss_pred ccCCeEEecCCccccccccchhhhhhhcccCCCCCCCCCCCceeEEeehh--HHHHHHHHHHhhcccCCCCEEEEEeCCc
Q 008823 289 SKVPIMVVEGNHEYEEQAENRTFVAYTSRFAFPSKESGSLSKFYYSFNAG--DQYKWLEEDLANVEREVTPWLVATWHAP 366 (552)
Q Consensus 289 ~~iP~~~v~GNHE~~~~~~~~~f~~y~~rF~~P~~~~~~~~~~yYsfd~G--~Q~~WL~~~L~~~~r~~~pwiIV~~H~P 366 (552)
...|+++++||||+. -+| . ....||.+... ++.+|+.++++ +.+||++|+|
T Consensus 54 ~~~~v~~v~GNHD~~------------~~~--~------G~~~w~~~~~~~~~~~~~~~~d~~-------~~~vv~~Hhp 106 (166)
T cd07404 54 GFEPVIYVPGNHEFY------------VRI--I------GTTLWSDISLFGEAAARMRMNDFR-------GKTVVVTHHA 106 (166)
T ss_pred CCccEEEeCCCcceE------------EEE--E------eeecccccCccchHHHHhCCCCCC-------CCEEEEeCCC
Confidence 578999999999985 112 0 12346666554 55666666655 2378889998
Q ss_pred ccccCcCc---cc-chHHHHHHHHHHHHHcCCcEEEEccccCceee
Q 008823 367 WYSTYKAH---YR-EAECMRVAMEDLLYKYGVDVVFNGHVHAYERS 408 (552)
Q Consensus 367 ~y~s~~~~---~~-~~~~~r~~l~~ll~~y~VdlvlsGH~H~yeR~ 408 (552)
++...... .. .....++.+.+++++++|+++++||+|.....
T Consensus 107 P~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~i~GH~H~~~~~ 152 (166)
T cd07404 107 PSPLSLAPQYGDSLVNAAFAVDLDDLILADPIDLWIHGHTHFNFDY 152 (166)
T ss_pred CCccccCccccCCCcchhhhhccHhHHhhcCCCEEEECCccccceE
Confidence 87653221 01 11234556778888999999999999987543
No 23
>cd07392 MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain. PAE1087 is an uncharacterized Pyrobaculum aerophilum protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordina
Probab=99.41 E-value=2.8e-12 Score=121.98 Aligned_cols=160 Identities=17% Similarity=0.193 Sum_probs=87.9
Q ss_pred EEEEeccCCCCChHHHHHHHHHCCCCEEEEcCccccccccccCCCCCCcccccCCCCCCcccchHHHHHHHHhhhhhhcc
Q 008823 211 IAIVGDVGLTYNTTSTVSHMISNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDYWGRYMQPVLSK 290 (552)
Q Consensus 211 faviGD~g~~~~~~~~l~~l~~~~pDfvl~~GDl~Yad~~~~~G~~~d~~~~~~~~~~~~e~y~~~wd~~~~~l~~l~~~ 290 (552)
|+++||+|........ ..+.+.++|+||++||++.. +.. .....+ +.++. ..
T Consensus 1 i~~~sD~H~~~~~~~~-~~~~~~~~D~vv~~GDl~~~------~~~------------------~~~~~~-~~l~~--~~ 52 (188)
T cd07392 1 ILAISDIHGDVEKLEA-IILKAEEADAVIVAGDITNF------GGK------------------EAAVEI-NLLLA--IG 52 (188)
T ss_pred CEEEEecCCCHHHHHH-HHhhccCCCEEEECCCccCc------CCH------------------HHHHHH-HHHHh--cC
Confidence 5789999987543222 34555689999999999852 220 011111 33333 36
Q ss_pred CCeEEecCCccccccccchhhhhhhcccCCCCC-----C-----CCCC-CceeE-Eeehh-HHHHHHHHHHhhcccCCCC
Q 008823 291 VPIMVVEGNHEYEEQAENRTFVAYTSRFAFPSK-----E-----SGSL-SKFYY-SFNAG-DQYKWLEEDLANVEREVTP 357 (552)
Q Consensus 291 iP~~~v~GNHE~~~~~~~~~f~~y~~rF~~P~~-----~-----~~~~-~~~yY-sfd~G-~Q~~WL~~~L~~~~r~~~p 357 (552)
+|+++++||||....... +. ...+.+... + .++. ...+. ...+. +|++|+ +.|... ..+
T Consensus 53 ~p~~~v~GNHD~~~~~~~--~~--~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~-~~l~~~---~~~ 124 (188)
T cd07392 53 VPVLAVPGNCDTPEILGL--LT--SAGLNLHGKVVEVGGYTFVGIGGSNPTPFNTPIELSEEEIVSD-GRLNNL---LAK 124 (188)
T ss_pred CCEEEEcCCCCCHHHHHh--hh--cCcEecCCCEEEECCEEEEEeCCCCCCCCCCccccCHHHHHHh-hhhhcc---CCC
Confidence 899999999997421110 00 000000000 0 0000 00000 00111 788998 444432 234
Q ss_pred EEEEEeCCcccccCcC-cccchHHHHHHHHHHHHHcCCcEEEEccccCce
Q 008823 358 WLVATWHAPWYSTYKA-HYREAECMRVAMEDLLYKYGVDVVFNGHVHAYE 406 (552)
Q Consensus 358 wiIV~~H~P~y~s~~~-~~~~~~~~r~~l~~ll~~y~VdlvlsGH~H~ye 406 (552)
.+|+++|+|++..... .......-.+.+.+++++++++++|+||+|.-.
T Consensus 125 ~~ilv~H~pp~~~~~d~~~~~~~~g~~~l~~li~~~~~~~~l~GH~H~~~ 174 (188)
T cd07392 125 NLILVTHAPPYGTAVDRVSGGFHVGSKAIRKFIEERQPLLCICGHIHESR 174 (188)
T ss_pred CeEEEECCCCcCCcccccCCCCccCCHHHHHHHHHhCCcEEEEecccccc
Confidence 5899999998763111 111101124678889999999999999999864
No 24
>cd08163 MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. Cdc1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site
Probab=99.40 E-value=1.8e-12 Score=130.61 Aligned_cols=155 Identities=17% Similarity=0.210 Sum_probs=90.8
Q ss_pred HHHHHHHH-CCCCEEEEcCccccccccccCCCCCCcccccCCCCCCcccchHHHHHHHHhhhhhhccCCeEEecCCcccc
Q 008823 225 STVSHMIS-NRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDYWGRYMQPVLSKVPIMVVEGNHEYE 303 (552)
Q Consensus 225 ~~l~~l~~-~~pDfvl~~GDl~Yad~~~~~G~~~d~~~~~~~~~~~~e~y~~~wd~~~~~l~~l~~~iP~~~v~GNHE~~ 303 (552)
..+..+.+ .+||+||++||++.. |.... .+.|...++.|.+.+.++...+|++.++||||+.
T Consensus 35 ~~~~~~~~~l~PD~vv~lGDL~d~------G~~~~-----------~~~~~~~~~rf~~i~~~~~~~~pv~~VpGNHDig 97 (257)
T cd08163 35 RNWRYMQKQLKPDSTIFLGDLFDG------GRDWA-----------DEYWKKEYNRFMRIFDPSPGRKMVESLPGNHDIG 97 (257)
T ss_pred HHHHHHHHhcCCCEEEEecccccC------CeeCc-----------HHHHHHHHHHHHHHhcCCCccceEEEeCCCcccC
Confidence 34444543 589999999999852 32100 0111112233344444433358999999999985
Q ss_pred ccccc--hhhhhhhcccCCCCCCCCCCCceeEEeehh----------------------HHHHHHHHHHhhcccCCCCEE
Q 008823 304 EQAEN--RTFVAYTSRFAFPSKESGSLSKFYYSFNAG----------------------DQYKWLEEDLANVEREVTPWL 359 (552)
Q Consensus 304 ~~~~~--~~f~~y~~rF~~P~~~~~~~~~~yYsfd~G----------------------~Q~~WL~~~L~~~~r~~~pwi 359 (552)
..... .....|...|.-+ .|+|+.| +|.+||++.|+..... ..+
T Consensus 98 ~~~~~~~~~~~rf~~~Fg~~----------~~~~~~~~~~fV~Lds~~l~~~~~~~~~~~~~~~l~~~l~~~~~~--~p~ 165 (257)
T cd08163 98 FGNGVVLPVRQRFEKYFGPT----------SRVIDVGNHTFVILDTISLSNKDDPDVYQPPREFLHSFSAMKVKS--KPR 165 (257)
T ss_pred CCCCCCHHHHHHHHHHhCCC----------ceEEEECCEEEEEEccccccCCcccccchhHHHHHHhhhhccCCC--CcE
Confidence 32211 1234455555311 1222221 7999999999875432 248
Q ss_pred EEEeCCcccccCcCccc---ch------------H-HH-HHHHHHHHHHcCCcEEEEccccCceee
Q 008823 360 VATWHAPWYSTYKAHYR---EA------------E-CM-RVAMEDLLYKYGVDVVFNGHVHAYERS 408 (552)
Q Consensus 360 IV~~H~P~y~s~~~~~~---~~------------~-~~-r~~l~~ll~~y~VdlvlsGH~H~yeR~ 408 (552)
|++.|+|+|........ +. + .+ .+.-..||.+.++.+||+||+|.|=..
T Consensus 166 ILl~H~Plyr~~~~~cg~~re~~~~~~~~~g~~yq~~l~~~~s~~il~~~~P~~vfsGhdH~~C~~ 231 (257)
T cd08163 166 ILLTHVPLYRPPNTSCGPLRESKTPLPYGYGYQYQNLLEPSLSEVILKAVQPVIAFSGDDHDYCEV 231 (257)
T ss_pred EEEeccccccCCCCCCCCccccCCCCCCCCCccceeecCHHHHHHHHHhhCCcEEEecCCCcccee
Confidence 99999999864321100 00 0 11 234457888889999999999998665
No 25
>COG1409 Icc Predicted phosphohydrolases [General function prediction only]
Probab=99.40 E-value=4.2e-12 Score=129.00 Aligned_cols=173 Identities=25% Similarity=0.323 Sum_probs=102.9
Q ss_pred eEEEEEeccCCC--CC-hH----HHHHHHHHCCCCEEEEcCccccccccccCCCCCCcccccCCCCCCcccchHHHHHHH
Q 008823 209 SRIAIVGDVGLT--YN-TT----STVSHMISNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDYWG 281 (552)
Q Consensus 209 ~rfaviGD~g~~--~~-~~----~~l~~l~~~~pDfvl~~GDl~Yad~~~~~G~~~d~~~~~~~~~~~~e~y~~~wd~~~ 281 (552)
+||++++|.|.. .. .. ++++.+...+||+||++||++.. |. ....+...
T Consensus 1 ~~i~~isD~H~~~~~~~~~~~~~~~~~~i~~~~~D~~v~tGDl~~~------~~------------------~~~~~~~~ 56 (301)
T COG1409 1 MRIAHISDLHLGALGVDSEELLEALLAAIEQLKPDLLVVTGDLTND------GE------------------PEEYRRLK 56 (301)
T ss_pred CeEEEEecCcccccccchHHHHHHHHHHHhcCCCCEEEEccCcCCC------CC------------------HHHHHHHH
Confidence 489999999988 22 22 23455566789999999999952 32 12334455
Q ss_pred HhhhhhhccCCeEEecCCccccccccchhhhhhhcccCCCCCCCCCCC-------ceeEEeehh----HHHHHHHHHHhh
Q 008823 282 RYMQPVLSKVPIMVVEGNHEYEEQAENRTFVAYTSRFAFPSKESGSLS-------KFYYSFNAG----DQYKWLEEDLAN 350 (552)
Q Consensus 282 ~~l~~l~~~iP~~~v~GNHE~~~~~~~~~f~~y~~rF~~P~~~~~~~~-------~~yYsfd~G----~Q~~WL~~~L~~ 350 (552)
++++.+....|++++|||||.........-..+..++........... ...+....| .|++||++.|++
T Consensus 57 ~~l~~~~~~~~~~~vpGNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~G~~~~~q~~~l~~~l~~ 136 (301)
T COG1409 57 ELLARLELPAPVIVVPGNHDARVVNGEAFSDQFFNRYAVLVGACSSGGWRVIGLDSSVPGVPLGRLGAEQLDWLEEALAA 136 (301)
T ss_pred HHHhhccCCCceEeeCCCCcCCchHHHHhhhhhcccCcceEeeccCCceEEEEecCCCCCCCCCEECHHHHHHHHHHHHh
Confidence 666655567899999999998643221100111111100000000000 000001112 999999999998
Q ss_pred cccCCCCEEEEEeCCcccccCcCcccchHHHHHHHHHHHHHcC--CcEEEEccccCc
Q 008823 351 VEREVTPWLVATWHAPWYSTYKAHYREAECMRVAMEDLLYKYG--VDVVFNGHVHAY 405 (552)
Q Consensus 351 ~~r~~~pwiIV~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~y~--VdlvlsGH~H~y 405 (552)
........+|+++|+|..................+..++..++ |+++|+||.|.-
T Consensus 137 ~~~~~~~~~v~~~hh~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~vl~GH~H~~ 193 (301)
T COG1409 137 APERAKDTVVVLHHHPLPSPGTGVDRVALRDAGELLDVLIAHGNDVRLVLSGHIHLA 193 (301)
T ss_pred CccccCceEEEecCCCCCCCCCccceeeeecchhHHHHHHhcCCceEEEEeCccccc
Confidence 6543112468888888776443322222233456677888888 999999999987
No 26
>cd07385 MPP_YkuE_C Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain. YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-dia
Probab=99.39 E-value=2.1e-12 Score=126.79 Aligned_cols=180 Identities=19% Similarity=0.195 Sum_probs=104.9
Q ss_pred CeEEEEEeccCCCCCh-----HHHHHHHHHCCCCEEEEcCccccccccccCCCCCCcccccCCCCCCcccchHHHHHHHH
Q 008823 208 PSRIAIVGDVGLTYNT-----TSTVSHMISNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDYWGR 282 (552)
Q Consensus 208 p~rfaviGD~g~~~~~-----~~~l~~l~~~~pDfvl~~GDl~Yad~~~~~G~~~d~~~~~~~~~~~~e~y~~~wd~~~~ 282 (552)
++||++++|+|..... .+.++.+.+.+||+|+++||+++.. .. .. +.+.+
T Consensus 1 ~~~i~~~sDlH~~~~~~~~~~~~~~~~~~~~~~d~vl~~GD~~~~~------~~------------------~~-~~~~~ 55 (223)
T cd07385 1 GLRIAHLSDLHLGPFVSRERLERLVEKINALKPDLVVLTGDLVDGS------VD------------------VL-ELLLE 55 (223)
T ss_pred CCEEEEEeecCCCccCCHHHHHHHHHHHhccCCCEEEEcCcccCCc------ch------------------hh-HHHHH
Confidence 4799999999987532 3455556667999999999999531 10 00 24556
Q ss_pred hhhhhhccCCeEEecCCccccccccchhhhhhh-cccCCCCCCCC---CCCcee--EEeehh-HHHHHHHHHHhhcccCC
Q 008823 283 YMQPVLSKVPIMVVEGNHEYEEQAENRTFVAYT-SRFAFPSKESG---SLSKFY--YSFNAG-DQYKWLEEDLANVEREV 355 (552)
Q Consensus 283 ~l~~l~~~iP~~~v~GNHE~~~~~~~~~f~~y~-~rF~~P~~~~~---~~~~~y--Ysfd~G-~Q~~WL~~~L~~~~r~~ 355 (552)
.++.+...+|+++++||||+............. ..+.+-.++.. ..+... +.++.. ...+++.+.+++.+.
T Consensus 56 ~l~~l~~~~~v~~v~GNHD~~~~~~~~~~~~l~~~~v~~L~~~~~~~~~~~~~i~i~G~~~~~~~~~~~~~~~~~~~~-- 133 (223)
T cd07385 56 LLKKLKAPLGVYAVLGNHDYYSGDEENWIEALESAGITVLRNESVEISVGGATIGIAGVDDGLGRRPDLEKALKGLDE-- 133 (223)
T ss_pred HHhccCCCCCEEEECCCcccccCchHHHHHHHHHcCCEEeecCcEEeccCCeEEEEEeccCccccCCCHHHHHhCCCC--
Confidence 666666779999999999986432211011111 11111111100 000000 001111 345677777776543
Q ss_pred CCEEEEEeCCcccccCcCcccchHHHHHHHHHHHHHcCCcEEEEccccCceeeeecccCc--------------cCCCCC
Q 008823 356 TPWLVATWHAPWYSTYKAHYREAECMRVAMEDLLYKYGVDVVFNGHVHAYERSNRVYNYT--------------LDPCGP 421 (552)
Q Consensus 356 ~pwiIV~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~y~VdlvlsGH~H~yeR~~pv~n~~--------------~~~~g~ 421 (552)
..+.|++.|.|.+.. .+.+.++|++|+||+|..|...|..... ...+..
T Consensus 134 ~~~~I~l~H~P~~~~-----------------~~~~~~~dl~l~GHtHggqi~~~~~~~~~~~~~~~~~~~G~~~~~~~~ 196 (223)
T cd07385 134 DDPNILLAHQPDTAE-----------------EAAAWGVDLQLSGHTHGGQIRLPGIGPLVLSKLARPYDYGLYRKGGSQ 196 (223)
T ss_pred CCCEEEEecCCChhH-----------------HhcccCccEEEeccCCCCEEeccccccccchhhcCcccceEEEECCEE
Confidence 346899999986431 1156799999999999998776543210 022346
Q ss_pred eEEEeCCCCc
Q 008823 422 VHITVGDGGN 431 (552)
Q Consensus 422 vyiv~G~gG~ 431 (552)
+||..|.|..
T Consensus 197 ~~Vs~G~G~~ 206 (223)
T cd07385 197 LYVSRGLGTW 206 (223)
T ss_pred EEEcCCccCC
Confidence 7777776654
No 27
>cd00838 MPP_superfamily metallophosphatase superfamily, metallophosphatase domain. Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive me
Probab=99.30 E-value=2.6e-11 Score=106.79 Aligned_cols=116 Identities=30% Similarity=0.517 Sum_probs=81.7
Q ss_pred EEEeccCCCCChHHHH---HHHHHCCCCEEEEcCccccccccccCCCCCCcccccCCCCCCcccchHHHHHHHHhhhhhh
Q 008823 212 AIVGDVGLTYNTTSTV---SHMISNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDYWGRYMQPVL 288 (552)
Q Consensus 212 aviGD~g~~~~~~~~l---~~l~~~~pDfvl~~GDl~Yad~~~~~G~~~d~~~~~~~~~~~~e~y~~~wd~~~~~l~~l~ 288 (552)
+++||+|.+....... ....+.++|+||++||+++. +.. ..+..+........
T Consensus 1 ~~~gD~h~~~~~~~~~~~~~~~~~~~~~~vi~~GD~~~~------~~~------------------~~~~~~~~~~~~~~ 56 (131)
T cd00838 1 AVISDIHGNLEALEAVLEAALAAAEKPDFVLVLGDLVGD------GPD------------------PEEVLAAALALLLL 56 (131)
T ss_pred CeeecccCCccchHHHHHHHHhcccCCCEEEECCcccCC------CCC------------------chHHHHHHHHHhhc
Confidence 4689999886544332 23445699999999999963 211 11222222334445
Q ss_pred ccCCeEEecCCccccccccchhhhhhhcccCCCCCCCCCCCceeEEeehhHHHHHHHHHHhhcccCCCCEEEEEeCCccc
Q 008823 289 SKVPIMVVEGNHEYEEQAENRTFVAYTSRFAFPSKESGSLSKFYYSFNAGDQYKWLEEDLANVEREVTPWLVATWHAPWY 368 (552)
Q Consensus 289 ~~iP~~~v~GNHE~~~~~~~~~f~~y~~rF~~P~~~~~~~~~~yYsfd~G~Q~~WL~~~L~~~~r~~~pwiIV~~H~P~y 368 (552)
..+|+++++|||| |++.|.|++
T Consensus 57 ~~~~~~~~~GNHD----------------------------------------------------------i~~~H~~~~ 78 (131)
T cd00838 57 LGIPVYVVPGNHD----------------------------------------------------------ILLTHGPPY 78 (131)
T ss_pred CCCCEEEeCCCce----------------------------------------------------------EEEeccCCC
Confidence 7899999999999 888999887
Q ss_pred ccCcCcccchHHHHHHHHHHHHHcCCcEEEEccccCceeee
Q 008823 369 STYKAHYREAECMRVAMEDLLYKYGVDVVFNGHVHAYERSN 409 (552)
Q Consensus 369 ~s~~~~~~~~~~~r~~l~~ll~~y~VdlvlsGH~H~yeR~~ 409 (552)
.............+..+..++.+++++++|+||.|.+.+..
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GH~H~~~~~~ 119 (131)
T cd00838 79 DPLDELSPDEDPGSEALLELLEKYGVDLVLSGHTHVYERRE 119 (131)
T ss_pred CCchhhcccchhhHHHHHHHHHHhCCCEEEeCCeecccccc
Confidence 75432222222257888899999999999999999999874
No 28
>cd00840 MPP_Mre11_N Mre11 nuclease, N-terminal metallophosphatase domain. Mre11 (also known as SbcD in Escherichia coli) is a subunit of the MRX protein complex. This complex includes: Mre11, Rad50, and Xrs2/Nbs1, and plays a vital role in several nuclear processes including DNA double-strand break repair, telomere length maintenance, cell cycle checkpoint control, and meiotic recombination, in eukaryotes. During double-strand break repair, the MRX complex is required to hold the two ends of a broken chromosome together. In vitro studies show that Mre11 has 3'-5' exonuclease activity on dsDNA templates and endonuclease activity on dsDNA and ssDNA templates. In addition to the N-terminal phosphatase domain, the eukaryotic MRE11 members of this family have a C-terminal DNA binding domain (not included in this alignment model). MRE11-like proteins are found in prokaryotes and archaea was well as in eukaryotes. Mre11 belongs to the metallophosphatase (MPP) superfamily. MPPs are functi
Probab=99.29 E-value=3.4e-11 Score=117.78 Aligned_cols=171 Identities=16% Similarity=0.164 Sum_probs=93.8
Q ss_pred EEEEEeccCCCCCh----------------HHHHHHHHHCCCCEEEEcCccccccccccCCCCCCcccccCCCCCCcccc
Q 008823 210 RIAIVGDVGLTYNT----------------TSTVSHMISNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETY 273 (552)
Q Consensus 210 rfaviGD~g~~~~~----------------~~~l~~l~~~~pDfvl~~GDl~Yad~~~~~G~~~d~~~~~~~~~~~~e~y 273 (552)
||++++|+|.+... ..+++.+.+.++|+||++||++.... ..
T Consensus 1 ~i~~~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~GD~~~~~~----~~------------------ 58 (223)
T cd00840 1 RFLHTADWHLGKPLKGLSRDRRREDQFEAFEEIVELAIEEKVDFVLIAGDLFDSNN----PS------------------ 58 (223)
T ss_pred CeEEeccccCCccccCcCcccchHHHHHHHHHHHHHHHhcCCCEEEECCcccCCCC----CC------------------
Confidence 68999999987431 22344455679999999999985310 00
Q ss_pred hHHHHHHHHhhhhhh-ccCCeEEecCCccccccccch-hhhhhhcccC-----CCCC----CCCCCCceeEEeehh----
Q 008823 274 QPRWDYWGRYMQPVL-SKVPIMVVEGNHEYEEQAENR-TFVAYTSRFA-----FPSK----ESGSLSKFYYSFNAG---- 338 (552)
Q Consensus 274 ~~~wd~~~~~l~~l~-~~iP~~~v~GNHE~~~~~~~~-~f~~y~~rF~-----~P~~----~~~~~~~~yYsfd~G---- 338 (552)
...+..+.+.++.+. ..+|+++++||||........ ....+...+. .... ......-..+-..+.
T Consensus 59 ~~~~~~~~~~~~~~~~~~~~v~~~~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~g~~~~~~~~ 138 (223)
T cd00840 59 PEALELLIEALRRLKEAGIPVFIIAGNHDSPSRLGALSPLLALSGLHLVGVEEDVLTPLLLPKGGTGVAIYGLPYLRRSR 138 (223)
T ss_pred HHHHHHHHHHHHHHHHCCCCEEEecCCCCCccccccccchHhhCcEEEEcccCcceeEEEeccCCeEEEEEECCCCCHHH
Confidence 123455566666654 579999999999986532210 0111111000 0000 000000011111111
Q ss_pred --HHHHHHHHHHhhcccCCCCEEEEEeCCcccccCcCcccchHHHHHHHHHHHHHcCCcEEEEccccCceee
Q 008823 339 --DQYKWLEEDLANVEREVTPWLVATWHAPWYSTYKAHYREAECMRVAMEDLLYKYGVDVVFNGHVHAYERS 408 (552)
Q Consensus 339 --~Q~~WL~~~L~~~~r~~~pwiIV~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~y~VdlvlsGH~H~yeR~ 408 (552)
.+.++++..+.+.. .....|++.|.|+.......... .......+...++|++++||.|..+..
T Consensus 139 ~~~~~~~~~~~~~~~~--~~~~~Il~~H~~~~~~~~~~~~~----~~~~~~~~~~~~~d~v~~GH~H~~~~~ 204 (223)
T cd00840 139 LRDLLADAELRPRPLD--PDDFNILLLHGGVAGAGPSDSER----APFVPEALLPAGFDYVALGHIHRPQII 204 (223)
T ss_pred HHHHHHHHHHHhhccC--CCCcEEEEEeeeeecCCCCcccc----cccCcHhhcCcCCCEEECCCcccCeee
Confidence 34444444554443 34568999999986543221110 122334456789999999999997653
No 29
>TIGR03767 P_acnes_RR metallophosphoesterase, PPA1498 family. This model describes a small collection of probable metallophosphoresterases, related to pfam00149 but with long inserts separating some of the shared motifs such that the homology is apparent only through multiple sequence alignment. Members of this protein family, in general, have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. Members include YP_056203.1 from Propionibacterium acnes KPA171202.
Probab=99.29 E-value=2.3e-11 Score=129.79 Aligned_cols=77 Identities=26% Similarity=0.422 Sum_probs=57.8
Q ss_pred CceeEEee-hh----------------------HHHHHHHHHHhhcccCCCCEEEEEeCCcccccCcCccc-----chHH
Q 008823 329 SKFYYSFN-AG----------------------DQYKWLEEDLANVEREVTPWLVATWHAPWYSTYKAHYR-----EAEC 380 (552)
Q Consensus 329 ~~~yYsfd-~G----------------------~Q~~WL~~~L~~~~r~~~pwiIV~~H~P~y~s~~~~~~-----~~~~ 380 (552)
+..||+|+ .+ +|++||+++|++. ..+++||++|||++........ ....
T Consensus 290 G~~YYSFd~~ggvrfIvLDSt~~~G~~~G~L~eeQL~WLeqeLa~a---~~k~VVVf~HHPp~s~g~~~~Dp~~pg~~~~ 366 (496)
T TIGR03767 290 GTGYYTFDIAGGVRGISMDTTNRAGGDEGSLGQTQFKWIKDTLRAS---SDTLFVLFSHHTSWSMVNELTDPVDPGEKRH 366 (496)
T ss_pred CCceEEEEeECCEEEEEEeCCCcCCCcCCccCHHHHHHHHHHHhcC---CCCCEEEEECCCCcccccccccccccccccc
Confidence 56799999 44 9999999999974 3457999999998865332110 1112
Q ss_pred HHHHHHHHHHHc-CCcEEEEccccCceee
Q 008823 381 MRVAMEDLLYKY-GVDVVFNGHVHAYERS 408 (552)
Q Consensus 381 ~r~~l~~ll~~y-~VdlvlsGH~H~yeR~ 408 (552)
..++|.++|.+| +|.++|+||.|.....
T Consensus 367 n~~eLldLL~~ypnV~aVfsGHvH~n~i~ 395 (496)
T TIGR03767 367 LGTELVSLLLEHPNVLAWVNGHTHSNKIT 395 (496)
T ss_pred CHHHHHHHHhcCCCceEEEECCcCCCccc
Confidence 246899999998 7999999999987654
No 30
>KOG1432 consensus Predicted DNA repair exonuclease SIA1 [General function prediction only]
Probab=99.29 E-value=2.8e-10 Score=115.06 Aligned_cols=195 Identities=22% Similarity=0.318 Sum_probs=108.7
Q ss_pred CCeEEEEEeccCCCCC--------------------hHHHHHHHH-HCCCCEEEEcCccccccccccCCCCCCcccccCC
Q 008823 207 YPSRIAIVGDVGLTYN--------------------TTSTVSHMI-SNRPDLILLVGDVTYANLYLTNGTGSDCYACSFA 265 (552)
Q Consensus 207 ~p~rfaviGD~g~~~~--------------------~~~~l~~l~-~~~pDfvl~~GDl~Yad~~~~~G~~~d~~~~~~~ 265 (552)
.+|||+.++|+|.+.. ....++++. .++||||+++||++++..
T Consensus 52 g~fKIlqvaDlH~g~g~~~~c~d~~p~~~~~csD~nTt~F~~rvL~sE~PDlVVfTGD~i~g~~---------------- 115 (379)
T KOG1432|consen 52 GTFKILQVADLHFGFGRETRCRDVLPSEEACCSDLNTTNFVSRVLASEKPDLVVFTGDNIFGHS---------------- 115 (379)
T ss_pred CceEEEEeeccccccCCCccccccCcchhhhhcCccHHHHHHHHHhccCCCEEEEeCCcccccc----------------
Confidence 4799999999998743 123455544 579999999999997421
Q ss_pred CCCCcccchHHHHHHHHhhhhh-hccCCeEEecCCccccccccchhh---------------------------hhhhcc
Q 008823 266 NSPIHETYQPRWDYWGRYMQPV-LSKVPIMVVEGNHEYEEQAENRTF---------------------------VAYTSR 317 (552)
Q Consensus 266 ~~~~~e~y~~~wd~~~~~l~~l-~~~iP~~~v~GNHE~~~~~~~~~f---------------------------~~y~~r 317 (552)
+ ..++ ..+...++|. ..+|||.+++||||-+........ ..|..+
T Consensus 116 ---t-~Da~---~sl~kAvaP~I~~~IPwA~~lGNHDdes~ltr~ql~~~i~~lP~s~~~v~p~dg~~~~~~g~gnyn~~ 188 (379)
T KOG1432|consen 116 ---T-QDAA---TSLMKAVAPAIDRKIPWAAVLGNHDDESDLTRLQLMKFISKLPYSLSQVNPPDGHMYIIDGFGNYNLQ 188 (379)
T ss_pred ---c-HhHH---HHHHHHhhhHhhcCCCeEEEecccccccccCHHHHHHHHhcCCCccccCCCcccceeeeecccceEEE
Confidence 0 0112 1244555664 478999999999998754321111 111111
Q ss_pred c-CCCCCCC--CCCCc--------------eeEEeehh--HHHHHHHHHHhh---cccCCCC-EEEEEeCCcccc--cCc
Q 008823 318 F-AFPSKES--GSLSK--------------FYYSFNAG--DQYKWLEEDLAN---VEREVTP-WLVATWHAPWYS--TYK 372 (552)
Q Consensus 318 F-~~P~~~~--~~~~~--------------~yYsfd~G--~Q~~WL~~~L~~---~~r~~~p-wiIV~~H~P~y~--s~~ 372 (552)
. .+++.+. .+..+ ..|.+|.. .|.+||+..-.+ .+..-.| --++++|.|+-. .-.
T Consensus 189 i~~~~ds~~~~~sv~~lyfld~~~~~s~~~~~~~Ydwik~sq~~wl~~~~~~~~~~~~~~~P~p~La~~HIP~~E~~~~~ 268 (379)
T KOG1432|consen 189 IEGAIDSELENKSVFNLYFLDSSSYTSVPPLLPGYDWIKESQLEWLSDTSKEFKEPNSKYNPQPGLAFFHIPLPEFLELE 268 (379)
T ss_pred eccCCCcccccCceeeEEEEecCCcccccccccCccchhhhhHHHHhhhhhhhhcccCccCCCCceEEEEcccHHHhhcc
Confidence 1 1111110 01112 22222222 899999987732 1112223 468889998632 111
Q ss_pred C------cccch---HHHHHHHHHHHH-HcCCcEEEEccccCceeeeecccCccCCCCCeEEEeCCCCc
Q 008823 373 A------HYREA---ECMRVAMEDLLY-KYGVDVVFNGHVHAYERSNRVYNYTLDPCGPVHITVGDGGN 431 (552)
Q Consensus 373 ~------~~~~~---~~~r~~l~~ll~-~y~VdlvlsGH~H~yeR~~pv~n~~~~~~g~vyiv~G~gG~ 431 (552)
. .+++. ......+...|. ..+|+.|++||+|...--.+ -.+.+++.=|+|+.
T Consensus 269 ~~tp~~g~~~E~~~~~~~~sg~~~~L~~r~~Vk~vf~GHdHvNDfC~~-------~k~~~wlCygGgaG 330 (379)
T KOG1432|consen 269 SKTPLIGVFQEGVSASKHNSGFLTTLVNRGNVKGVFCGHDHVNDFCGE-------LKGELWLCYGGGAG 330 (379)
T ss_pred CCCcccceeeccccccccccHHHHHHHhccCcceEEeccccccceecc-------cCCeEEEEecCCCc
Confidence 1 01111 111234556666 78999999999998766543 23447777666544
No 31
>PRK11340 phosphodiesterase YaeI; Provisional
Probab=99.26 E-value=3.9e-11 Score=122.00 Aligned_cols=72 Identities=24% Similarity=0.421 Sum_probs=52.7
Q ss_pred CeEEEEEeccCCCCC-----hHHHHHHHHHCCCCEEEEcCccccccccccCCCCCCcccccCCCCCCcccchHHHHHHHH
Q 008823 208 PSRIAIVGDVGLTYN-----TTSTVSHMISNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDYWGR 282 (552)
Q Consensus 208 p~rfaviGD~g~~~~-----~~~~l~~l~~~~pDfvl~~GDl~Yad~~~~~G~~~d~~~~~~~~~~~~e~y~~~wd~~~~ 282 (552)
++||++++|+|.... ....++.+.+.+||+|+++||+++.+ . ...++.+.+
T Consensus 49 ~~rI~~lSDlH~~~~~~~~~l~~~v~~i~~~~pDlVli~GD~~d~~------~------------------~~~~~~~~~ 104 (271)
T PRK11340 49 PFKILFLADLHYSRFVPLSLISDAIALGIEQKPDLILLGGDYVLFD------M------------------PLNFSAFSD 104 (271)
T ss_pred CcEEEEEcccCCCCcCCHHHHHHHHHHHHhcCCCEEEEccCcCCCC------c------------------cccHHHHHH
Confidence 699999999998632 13345556677999999999998421 1 012345666
Q ss_pred hhhhhhccCCeEEecCCcccc
Q 008823 283 YMQPVLSKVPIMVVEGNHEYE 303 (552)
Q Consensus 283 ~l~~l~~~iP~~~v~GNHE~~ 303 (552)
.++.+.+..|+++|+||||+.
T Consensus 105 ~L~~L~~~~pv~~V~GNHD~~ 125 (271)
T PRK11340 105 VLSPLAECAPTFACFGNHDRP 125 (271)
T ss_pred HHHHHhhcCCEEEecCCCCcc
Confidence 777777678999999999985
No 32
>cd07388 MPP_Tt1561 Thermus thermophilus Tt1561 and related proteins, metallophosphatase domain. This family includes bacterial proteins related to Tt1561 (also known as Aq1956 in Aquifex aeolicus), an uncharacterized Thermus thermophilus protein. The conserved domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets,
Probab=99.17 E-value=3.8e-10 Score=111.18 Aligned_cols=162 Identities=15% Similarity=0.171 Sum_probs=88.3
Q ss_pred CeEEEEEeccCCCCChH-HHHHHHHHCCCCEEEEcCccccccccccCCCCCCcccccCCCCCCcccchHHHHHHHHhhhh
Q 008823 208 PSRIAIVGDVGLTYNTT-STVSHMISNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDYWGRYMQP 286 (552)
Q Consensus 208 p~rfaviGD~g~~~~~~-~~l~~l~~~~pDfvl~~GDl~Yad~~~~~G~~~d~~~~~~~~~~~~e~y~~~wd~~~~~l~~ 286 (552)
+.||++++|+|.....- ..++.+.+.++|+||++||+++. |. ..+.+.++++.
T Consensus 4 ~~kIl~iSDiHgn~~~le~l~~~~~~~~~D~vv~~GDl~~~------g~--------------------~~~~~~~~l~~ 57 (224)
T cd07388 4 VRYVLATSNPKGDLEALEKLVGLAPETGADAIVLIGNLLPK------AA--------------------KSEDYAAFFRI 57 (224)
T ss_pred eeEEEEEEecCCCHHHHHHHHHHHhhcCCCEEEECCCCCCC------CC--------------------CHHHHHHHHHH
Confidence 57999999999753322 23343445689999999999952 21 01223344444
Q ss_pred hh-ccCCeEEecCCccccccccchhhh-hhhcccCCCCC----CC-----------CCCCceeEEeehh-HHH----HHH
Q 008823 287 VL-SKVPIMVVEGNHEYEEQAENRTFV-AYTSRFAFPSK----ES-----------GSLSKFYYSFNAG-DQY----KWL 344 (552)
Q Consensus 287 l~-~~iP~~~v~GNHE~~~~~~~~~f~-~y~~rF~~P~~----~~-----------~~~~~~yYsfd~G-~Q~----~WL 344 (552)
+. ..+|+++++||||.... ..+. .|...-.+|.. .. +-.+..-+.+.+. +|. +||
T Consensus 58 l~~l~~pv~~V~GNhD~~v~---~~l~~~~~~~~~~p~~~~lh~~~~~~~g~~~~~GlGGs~~~~~e~sE~e~~~~~~~~ 134 (224)
T cd07388 58 LGEAHLPTFYVPGPQDAPLW---EYLREAYNAELVHPEIRNVHETFAFWRGPYLVAGVGGEIADEGEPEEHEALRYPAWV 134 (224)
T ss_pred HHhcCCceEEEcCCCChHHH---HHHHHHhcccccCccceecCCCeEEecCCeEEEEecCCcCCCCCcCHHHHhhhhhhH
Confidence 42 25899999999996300 0011 11100001110 00 0000000111111 331 565
Q ss_pred HH-HHhhcccCCCCEEEEEeCCcccccCcCcccchHHHHHHHHHHHHHcCCcEEEEcccc
Q 008823 345 EE-DLANVEREVTPWLVATWHAPWYSTYKAHYREAECMRVAMEDLLYKYGVDVVFNGHVH 403 (552)
Q Consensus 345 ~~-~L~~~~r~~~pwiIV~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~y~VdlvlsGH~H 403 (552)
.+ .|+...+...+..|+++|+|+|.....| .. ..++..++++++..++++||+|
T Consensus 135 ~~~~l~~~~~~~~~~~VLv~H~PP~g~g~~h-~G----S~alr~~I~~~~P~l~i~GHih 189 (224)
T cd07388 135 AEYRLKALWELKDYRKVFLFHTPPYHKGLNE-QG----SHEVAHLIKTHNPLVVLVGGKG 189 (224)
T ss_pred HHHHHHHHHhCCCCCeEEEECCCCCCCCCCc-cC----HHHHHHHHHHhCCCEEEEcCCc
Confidence 33 2222211123458999999999874323 22 3567788999999999999999
No 33
>PF12850 Metallophos_2: Calcineurin-like phosphoesterase superfamily domain; InterPro: IPR024654 Domains in this entry are members of the calcineurin-like phosphoesterase domain superfamily [].; PDB: 2GJU_A 1Z2W_A 1Z2X_B 3PSO_B 3PSN_B 1W24_A 2R17_B 3QFN_B 3QFO_A 3QFM_A ....
Probab=99.08 E-value=7e-10 Score=102.14 Aligned_cols=140 Identities=19% Similarity=0.307 Sum_probs=83.0
Q ss_pred eEEEEEeccCCCCCh-HHHHHHHHHCCCCEEEEcCccccccccccCCCCCCcccccCCCCCCcccchHHHHHHHHhhhhh
Q 008823 209 SRIAIVGDVGLTYNT-TSTVSHMISNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDYWGRYMQPV 287 (552)
Q Consensus 209 ~rfaviGD~g~~~~~-~~~l~~l~~~~pDfvl~~GDl~Yad~~~~~G~~~d~~~~~~~~~~~~e~y~~~wd~~~~~l~~l 287 (552)
+||+++||+|..... .+.++.+ +++|+|+++||++.. .++.+.++.+
T Consensus 1 Mki~~~sD~H~~~~~~~~~~~~~--~~~d~vi~~GDi~~~------------------------------~~~~~~~~~~ 48 (156)
T PF12850_consen 1 MKIAVISDLHGNLDALEAVLEYI--NEPDFVIILGDIFDP------------------------------EEVLELLRDI 48 (156)
T ss_dssp EEEEEEE--TTTHHHHHHHHHHH--TTESEEEEES-SCSH------------------------------HHHHHHHHHH
T ss_pred CEEEEEeCCCCChhHHHHHHHHh--cCCCEEEECCCchhH------------------------------HHHHHHHhcC
Confidence 589999999986432 3345555 579999999999731 2334444443
Q ss_pred hccCCeEEecCCccccccccchhhhhhhcccCCCCCCCCCCCceeEEeehhHHHHHHHHHHhhcccCCCCEEEEEeCCcc
Q 008823 288 LSKVPIMVVEGNHEYEEQAENRTFVAYTSRFAFPSKESGSLSKFYYSFNAGDQYKWLEEDLANVEREVTPWLVATWHAPW 367 (552)
Q Consensus 288 ~~~iP~~~v~GNHE~~~~~~~~~f~~y~~rF~~P~~~~~~~~~~yYsfd~G~Q~~WL~~~L~~~~r~~~pwiIV~~H~P~ 367 (552)
|++++.||||... +....... .-...+.+ ....+.|++.|...
T Consensus 49 ----~~~~v~GNHD~~~---------~~~~~~~~------~~~~~~~~------------------~~~~~~i~~~H~~~ 91 (156)
T PF12850_consen 49 ----PVYVVRGNHDNWA---------FPNENDEE------YLLDALRL------------------TIDGFKILLSHGHP 91 (156)
T ss_dssp ----EEEEE--CCHSTH---------HHSEECTC------SSHSEEEE------------------EETTEEEEEESSTS
T ss_pred ----CEEEEeCCccccc---------chhhhhcc------ccccceee------------------eecCCeEEEECCCC
Confidence 8999999999631 11110000 00001111 11245889999877
Q ss_pred cccCcCcccchHHHHHHHHHHHHHcCCcEEEEccccCceeeeecccCccCCCCCeEEEeCCCCccC
Q 008823 368 YSTYKAHYREAECMRVAMEDLLYKYGVDVVFNGHVHAYERSNRVYNYTLDPCGPVHITVGDGGNRE 433 (552)
Q Consensus 368 y~s~~~~~~~~~~~r~~l~~ll~~y~VdlvlsGH~H~yeR~~pv~n~~~~~~g~vyiv~G~gG~~e 433 (552)
+.... ..+.+..++...+++++|+||.|..+... .+++.++..|+.+...
T Consensus 92 ~~~~~--------~~~~~~~~~~~~~~~~~~~GH~H~~~~~~--------~~~~~~~~~Gs~~~~~ 141 (156)
T PF12850_consen 92 YDVQW--------DPAELREILSRENVDLVLHGHTHRPQVFK--------IGGIHVINPGSIGGPR 141 (156)
T ss_dssp SSSTT--------THHHHHHHHHHTTSSEEEESSSSSEEEEE--------ETTEEEEEE-GSSS-S
T ss_pred ccccc--------ChhhhhhhhcccCCCEEEcCCcccceEEE--------ECCEEEEECCcCCCCC
Confidence 65321 12345677789999999999999987763 3578888888876643
No 34
>cd07379 MPP_239FB Homo sapiens 239FB and related proteins, metallophosphatase domain. 239FB (Fetal brain protein 239) is thought to play a role in central nervous system development, but its specific role in unknown. 239FB is expressed predominantly in human fetal brain from a gene located in the chromosome 11p13 region associated with the mental retardation component of the WAGR (Wilms tumor, Aniridia, Genitourinary anomalies, Mental retardation) syndrome. Orthologous brp-like (brain protein 239-like) proteins have been identified in the invertebrate amphioxus group and in vertebrates. 239FB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzyme
Probab=99.07 E-value=9.1e-10 Score=99.93 Aligned_cols=117 Identities=16% Similarity=0.194 Sum_probs=73.7
Q ss_pred EEEEEeccCCCCChHHHHHHHHHCCCCEEEEcCccccccccccCCCCCCcccccCCCCCCcccchHHHHHHHHhhhhhhc
Q 008823 210 RIAIVGDVGLTYNTTSTVSHMISNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDYWGRYMQPVLS 289 (552)
Q Consensus 210 rfaviGD~g~~~~~~~~l~~l~~~~pDfvl~~GDl~Yad~~~~~G~~~d~~~~~~~~~~~~e~y~~~wd~~~~~l~~l~~ 289 (552)
||+++||+|.... .+...++|+|+++||++.. +. ...++.+.+.++.+.
T Consensus 1 ~i~~isD~H~~~~------~~~~~~~D~vi~~GD~~~~------~~------------------~~~~~~~~~~l~~~~- 49 (135)
T cd07379 1 RFVCISDTHSRHR------TISIPDGDVLIHAGDLTER------GT------------------LEELQKFLDWLKSLP- 49 (135)
T ss_pred CEEEEeCCCCCCC------cCcCCCCCEEEECCCCCCC------CC------------------HHHHHHHHHHHHhCC-
Confidence 5899999997754 2334589999999999842 21 122334444554442
Q ss_pred cCCeEEecCCccccccccchhhhhhhcccCCCCCCCCCCCceeEEeehhHHHHHHHHHHhhcccCCCCEEEEEeCCcccc
Q 008823 290 KVPIMVVEGNHEYEEQAENRTFVAYTSRFAFPSKESGSLSKFYYSFNAGDQYKWLEEDLANVEREVTPWLVATWHAPWYS 369 (552)
Q Consensus 290 ~iP~~~v~GNHE~~~~~~~~~f~~y~~rF~~P~~~~~~~~~~yYsfd~G~Q~~WL~~~L~~~~r~~~pwiIV~~H~P~y~ 369 (552)
..++++++||||.... . . .+.|++.|.|++.
T Consensus 50 ~~~~~~v~GNHD~~~~---------------------------------------------~--~--~~~ilv~H~~p~~ 80 (135)
T cd07379 50 HPHKIVIAGNHDLTLD---------------------------------------------P--E--DTDILVTHGPPYG 80 (135)
T ss_pred CCeEEEEECCCCCcCC---------------------------------------------C--C--CCEEEEECCCCCc
Confidence 1235789999996310 0 1 2368888999876
Q ss_pred cCcCcccchHHHHHHHHHHHHHcCCcEEEEccccCce
Q 008823 370 TYKAHYREAECMRVAMEDLLYKYGVDVVFNGHVHAYE 406 (552)
Q Consensus 370 s~~~~~~~~~~~r~~l~~ll~~y~VdlvlsGH~H~ye 406 (552)
...........-...+.+++.+++++++|+||+|...
T Consensus 81 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~GH~H~~~ 117 (135)
T cd07379 81 HLDLVSSGQRVGCEELLNRVQRVRPKLHVFGHIHEGY 117 (135)
T ss_pred CccccccCcccCCHHHHHHHHHHCCcEEEEcCcCCcC
Confidence 5321111001112456677788999999999999874
No 35
>cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain. DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy
Probab=99.05 E-value=4.3e-09 Score=104.23 Aligned_cols=184 Identities=22% Similarity=0.264 Sum_probs=99.6
Q ss_pred eEEEEEeccCCCCChHHHHHHHHHCCCCEEEEcCccccccccccCCCCCCcccccCCCCCCcccchHHHHHHHHhhhhhh
Q 008823 209 SRIAIVGDVGLTYNTTSTVSHMISNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDYWGRYMQPVL 288 (552)
Q Consensus 209 ~rfaviGD~g~~~~~~~~l~~l~~~~pDfvl~~GDl~Yad~~~~~G~~~d~~~~~~~~~~~~e~y~~~wd~~~~~l~~l~ 288 (552)
+||+++||+|..... ...+.+.+.+||+|+++||++.. . ..+.+.+..+
T Consensus 1 ~rIa~isDiHg~~~~-~~~~~l~~~~pD~Vl~~GDi~~~-------~----------------------~~~~~~l~~l- 49 (238)
T cd07397 1 LRIAIVGDVHGQWDL-EDIKALHLLQPDLVLFVGDFGNE-------S----------------------VQLVRAISSL- 49 (238)
T ss_pred CEEEEEecCCCCchH-HHHHHHhccCCCEEEECCCCCcC-------h----------------------HHHHHHHHhC-
Confidence 589999999976443 23445666799999999999831 0 0122333332
Q ss_pred ccCCeEEecCCccccccccc-hhhhhhhcc-------------cCCCCCC--------CCCCCceeEEe-e----hh---
Q 008823 289 SKVPIMVVEGNHEYEEQAEN-RTFVAYTSR-------------FAFPSKE--------SGSLSKFYYSF-N----AG--- 338 (552)
Q Consensus 289 ~~iP~~~v~GNHE~~~~~~~-~~f~~y~~r-------------F~~P~~~--------~~~~~~~yYsf-d----~G--- 338 (552)
..|++++.||||....... ..+..+... ..+|... -...+..|.+- . +|
T Consensus 50 -~~p~~~V~GNHD~~~~~~~~~k~~~l~~~L~~lg~~~l~~~~~~~~~~~~~vvG~R~~~~~g~~~~~~~~vr~~fgi~s 128 (238)
T cd07397 50 -PLPKAVILGNHDAWYDATFRKKGDRVQEQLELLGDLHCGWGRLDFPPLPLSVVGGRPFSAGGGFWLSKKAVKAVYGVIS 128 (238)
T ss_pred -CCCeEEEcCCCcccccccccchHHHHHHHHHHhCCcEEeecccccCCCCeEEEeeCCccCCCccccCHHHHHHHhCCCC
Confidence 4799999999998653210 011111111 1122200 01123333331 0 11
Q ss_pred --HHHHHHHHHHhhcccCCCCEEEEEeCCcccccCcCc-------------ccchHHHHHHHHHHHHHcCCcEEEEcccc
Q 008823 339 --DQYKWLEEDLANVEREVTPWLVATWHAPWYSTYKAH-------------YREAECMRVAMEDLLYKYGVDVVFNGHVH 403 (552)
Q Consensus 339 --~Q~~WL~~~L~~~~r~~~pwiIV~~H~P~y~s~~~~-------------~~~~~~~r~~l~~ll~~y~VdlvlsGH~H 403 (552)
+-.+.+.+.++.++.. .+ .|++.|.++....+.. .-....+.+++..+-.+-.++++++||+|
T Consensus 129 ~~eA~~~ive~~~~~~~~-~~-~VliaH~~~~G~g~~~~~~cg~d~~~~~~~~G~~~l~~ai~~~~~~~~~~l~~fGH~H 206 (238)
T cd07397 129 LEESAQRIIAAAKKAPPD-LP-LILLAHNGPSGLGSDAEDPCGRDWKPPGGDWGDPDLALAISQIQQGRQVPLVVFGHMH 206 (238)
T ss_pred HHHHHHHHHHHhhhcCCC-CC-eEEEeCcCCcCCCcccccccccccCCcCCCCCCHHHHHHHHHHhccCCCCEEEeCCcc
Confidence 4445555555433322 22 6889999887643110 11234566777655534458999999999
Q ss_pred Cceeeee-ccc-CccCCCCCeEEEe
Q 008823 404 AYERSNR-VYN-YTLDPCGPVHITV 426 (552)
Q Consensus 404 ~yeR~~p-v~n-~~~~~~g~vyiv~ 426 (552)
.--|... +.. ...+..|++|+..
T Consensus 207 ~~l~~~~~~r~~~~~~~~gt~y~N~ 231 (238)
T cd07397 207 HRLRRGKGLRNMIAVDREGTVYLNA 231 (238)
T ss_pred CcccccccccceeeecCCCeEEEec
Confidence 7533221 110 1136679999854
No 36
>COG1408 Predicted phosphohydrolases [General function prediction only]
Probab=99.03 E-value=3.1e-09 Score=108.41 Aligned_cols=162 Identities=20% Similarity=0.216 Sum_probs=96.8
Q ss_pred CeEEEEEeccCCCCCh---HHHHHHHHHCCCCEEEEcCccccccccccCCCCCCcccccCCCCCCcccchHHHHHHHHhh
Q 008823 208 PSRIAIVGDVGLTYNT---TSTVSHMISNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDYWGRYM 284 (552)
Q Consensus 208 p~rfaviGD~g~~~~~---~~~l~~l~~~~pDfvl~~GDl~Yad~~~~~G~~~d~~~~~~~~~~~~e~y~~~wd~~~~~l 284 (552)
+++|+.++|+|..... .+.+.++....||+|+++||++..+ . ...+..+.+.+
T Consensus 44 ~~~iv~lSDlH~~~~~~~~~~~~~~i~~~~~DlivltGD~~~~~------~------------------~~~~~~~~~~L 99 (284)
T COG1408 44 GLKIVQLSDLHSLPFREEKLALLIAIANELPDLIVLTGDYVDGD------R------------------PPGVAALALFL 99 (284)
T ss_pred CeEEEEeehhhhchhhHHHHHHHHHHHhcCCCEEEEEeeeecCC------C------------------CCCHHHHHHHH
Confidence 6899999999987554 2344555567889999999999520 0 12345677888
Q ss_pred hhhhccCCeEEecCCccccccccchhhhhhhc---------ccCCCCCCCCC----CCceeEEeehhHHHHHHH------
Q 008823 285 QPVLSKVPIMVVEGNHEYEEQAENRTFVAYTS---------RFAFPSKESGS----LSKFYYSFNAGDQYKWLE------ 345 (552)
Q Consensus 285 ~~l~~~iP~~~v~GNHE~~~~~~~~~f~~y~~---------rF~~P~~~~~~----~~~~yYsfd~G~Q~~WL~------ 345 (552)
+++.+..+++++.||||+.....+........ ........... ....|+.- ..++..-+.
T Consensus 100 ~~L~~~~gv~av~GNHd~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~d~~~~~~~~~~~~ 178 (284)
T COG1408 100 AKLKAPLGVFAVLGNHDYGVDRSNVYIGDLLEELGRVVLRNEIAVIDLLALRIEVGGLDLYLAG-VEDILAGLPLAPFTI 178 (284)
T ss_pred HhhhccCCEEEEecccccccccccchhhhhhhhcceeeecccchhccccccccccccccccccc-CchHHhhCccccccc
Confidence 89999999999999999975433211111100 00010000000 00011110 003333333
Q ss_pred -----HHHhhcccCCCCEEEEEeCCcccccCcCcccchHHHHHHHHHHHHHcCCcEEEEccccCceeeeeccc
Q 008823 346 -----EDLANVEREVTPWLVATWHAPWYSTYKAHYREAECMRVAMEDLLYKYGVDVVFNGHVHAYERSNRVYN 413 (552)
Q Consensus 346 -----~~L~~~~r~~~pwiIV~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~y~VdlvlsGH~H~yeR~~pv~n 413 (552)
+.+.+.+ .....|+..|.|-.- ..+.+++||++||||+|.-|-..|.+.
T Consensus 179 ~~~~~~~~~~~~--~~~~~IlL~H~P~~~-----------------~~~~~~~~dLvLSGHTHGGQi~~p~~~ 232 (284)
T COG1408 179 GLDIAEALKQLD--EDLPGILLSHEPDII-----------------LQLRLYGVDLVLSGHTHGGQIRLPLWG 232 (284)
T ss_pred ccchhhhhcccc--ccccceEeccCCcee-----------------hhhccCcceEEEeccccCCeEEeeccc
Confidence 3334433 233589999999643 234566999999999999888876543
No 37
>cd00841 MPP_YfcE Escherichia coli YfcE and related proteins, metallophosphatase domain. YfcE is a manganase-dependent metallophosphatase, found in bacteria and archaea, that cleaves bis-p-nitrophenyl phosphate, thymidine 5'-monophosphate-p-nitrophenyl ester, and p-nitrophenyl phosphorylcholine, but is unable to hydrolyze 2',3 ' or 3',5' cyclic nucleic phosphodiesters, and various phosphomonoesters, including p-nitrophenyl phosphate. This family also includes the Bacilus subtilis YsnB and Methanococcus jannaschii MJ0936 proteins. This domain family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid ph
Probab=98.94 E-value=1.3e-08 Score=94.32 Aligned_cols=131 Identities=22% Similarity=0.268 Sum_probs=80.6
Q ss_pred EEEEEeccCCCCCh-HHHHHHHHHCCCCEEEEcCccccccccccCCCCCCcccccCCCCCCcccchHHHHHHHHhhhhhh
Q 008823 210 RIAIVGDVGLTYNT-TSTVSHMISNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDYWGRYMQPVL 288 (552)
Q Consensus 210 rfaviGD~g~~~~~-~~~l~~l~~~~pDfvl~~GDl~Yad~~~~~G~~~d~~~~~~~~~~~~e~y~~~wd~~~~~l~~l~ 288 (552)
||+++||+|..... ...++.+ .++|.|+++||++.. +.. . . +.
T Consensus 1 ~i~~isD~H~~~~~~~~~~~~~--~~~d~ii~~GD~~~~------~~~-----------------~-~----------~~ 44 (155)
T cd00841 1 KIGVISDTHGSLELLEKALELF--GDVDLIIHAGDVLYP------GPL-----------------N-E----------LE 44 (155)
T ss_pred CEEEEecCCCCHHHHHHHHHHh--cCCCEEEECCccccc------ccc-----------------c-h----------hh
Confidence 58999999976422 1222222 239999999999852 110 0 0 23
Q ss_pred ccCCeEEecCCccccccccchhhhhhhcccCCCCCCCCCCCceeEEeehhHHHHHHHHHHhhcccCCCCEEEEEeCCccc
Q 008823 289 SKVPIMVVEGNHEYEEQAENRTFVAYTSRFAFPSKESGSLSKFYYSFNAGDQYKWLEEDLANVEREVTPWLVATWHAPWY 368 (552)
Q Consensus 289 ~~iP~~~v~GNHE~~~~~~~~~f~~y~~rF~~P~~~~~~~~~~yYsfd~G~Q~~WL~~~L~~~~r~~~pwiIV~~H~P~y 368 (552)
...|++.|.||||.... ...+|. ...++ . ..++|++.|.+..
T Consensus 45 ~~~~~~~V~GNhD~~~~-----------~~~~p~---------~~~~~--------------~----~g~~i~v~Hg~~~ 86 (155)
T cd00841 45 LKAPVIAVRGNCDGEVD-----------FPILPE---------EAVLE--------------I----GGKRIFLTHGHLY 86 (155)
T ss_pred cCCcEEEEeCCCCCcCC-----------cccCCc---------eEEEE--------------E----CCEEEEEECCccc
Confidence 45789999999997421 011221 11111 1 1257899998876
Q ss_pred ccCcCcccchHHHHHHHHHHHHHcCCcEEEEccccCceeeeecccCccCCCCCeEEEeCCCCc
Q 008823 369 STYKAHYREAECMRVAMEDLLYKYGVDVVFNGHVHAYERSNRVYNYTLDPCGPVHITVGDGGN 431 (552)
Q Consensus 369 ~s~~~~~~~~~~~r~~l~~ll~~y~VdlvlsGH~H~yeR~~pv~n~~~~~~g~vyiv~G~gG~ 431 (552)
..... . + . ..++.+.++|++++||+|...... .+++.+|..|+.|.
T Consensus 87 ~~~~~----~---~-~-~~~~~~~~~d~vi~GHtH~~~~~~--------~~~~~~inpGs~~~ 132 (155)
T cd00841 87 GVKNG----L---D-R-LYLAKEGGADVVLYGHTHIPVIEK--------IGGVLLLNPGSLSL 132 (155)
T ss_pred ccccc----h---h-h-hhhhhhcCCCEEEECcccCCccEE--------ECCEEEEeCCCccC
Confidence 54211 0 1 1 456678899999999999865432 24778888888765
No 38
>PRK05340 UDP-2,3-diacylglucosamine hydrolase; Provisional
Probab=98.88 E-value=9.3e-09 Score=102.75 Aligned_cols=76 Identities=16% Similarity=0.289 Sum_probs=47.8
Q ss_pred eEEEEEeccCCCCChHH----HHHHHH--HCCCCEEEEcCccccccccccCCCCCCcccccCCCCCCcccchHHHHHHHH
Q 008823 209 SRIAIVGDVGLTYNTTS----TVSHMI--SNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDYWGR 282 (552)
Q Consensus 209 ~rfaviGD~g~~~~~~~----~l~~l~--~~~pDfvl~~GDl~Yad~~~~~G~~~d~~~~~~~~~~~~e~y~~~wd~~~~ 282 (552)
+|+++++|+|.+..... .++.+. +.++|+|+++||++.. | .|.. .. .+......+
T Consensus 1 M~i~~iSDlHl~~~~~~~~~~~~~~l~~~~~~~d~l~i~GDl~d~--~--~g~~-----------~~----~~~~~~~~~ 61 (241)
T PRK05340 1 MPTLFISDLHLSPERPAITAAFLRFLRGEARQADALYILGDLFEA--W--IGDD-----------DP----SPFAREIAA 61 (241)
T ss_pred CcEEEEeecCCCCCChhHHHHHHHHHHhhhccCCEEEEccceecc--c--cccC-----------cC----CHHHHHHHH
Confidence 47999999998754322 233332 3589999999999942 1 1110 00 012233455
Q ss_pred hhhhhhcc-CCeEEecCCcccc
Q 008823 283 YMQPVLSK-VPIMVVEGNHEYE 303 (552)
Q Consensus 283 ~l~~l~~~-iP~~~v~GNHE~~ 303 (552)
.++.+... +|++.++||||..
T Consensus 62 ~l~~l~~~g~~v~~v~GNHD~~ 83 (241)
T PRK05340 62 ALKALSDSGVPCYFMHGNRDFL 83 (241)
T ss_pred HHHHHHHcCCeEEEEeCCCchh
Confidence 56666544 8999999999974
No 39
>TIGR00040 yfcE phosphoesterase, MJ0936 family. Members of this largely uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11, and a family of uncharacterized archaeal putative phosphoesterases described by TIGR00024. In this family, the His residue in GNHD portion of the motif is not conserved. The member MJ0936, one of two from Methanococcus jannaschii, was shown (PubMed:15128743) to act on model phosphodiesterase substrates; a divalent cation was required.
Probab=98.85 E-value=3.5e-08 Score=92.01 Aligned_cols=134 Identities=21% Similarity=0.259 Sum_probs=81.3
Q ss_pred eEEEEEeccCCCCChHHH-HHHHHHC-CCCEEEEcCccccccccccCCCCCCcccccCCCCCCcccchHHHHHHHHhhhh
Q 008823 209 SRIAIVGDVGLTYNTTST-VSHMISN-RPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDYWGRYMQP 286 (552)
Q Consensus 209 ~rfaviGD~g~~~~~~~~-l~~l~~~-~pDfvl~~GDl~Yad~~~~~G~~~d~~~~~~~~~~~~e~y~~~wd~~~~~l~~ 286 (552)
+||+++||+|......+. ++.+... ++|.|+++||++-. ...+.++.
T Consensus 1 m~i~viSD~H~~~~~~~~~~~~~~~~~~~d~ii~~GD~~~~-------------------------------~~~~~l~~ 49 (158)
T TIGR00040 1 MKILVISDTHGPLRATELPVELFNLESNVDLVIHAGDLTSP-------------------------------FVLKEFED 49 (158)
T ss_pred CEEEEEecccCCcchhHhHHHHHhhccCCCEEEEcCCCCCH-------------------------------HHHHHHHH
Confidence 489999999976543333 3334455 79999999999710 11222332
Q ss_pred hhccCCeEEecCCccccccccchhhhhhhcccCCCCCCCCCCCceeEEeehhHHHHHHHHHHhhcccCCCCEEEEEeCCc
Q 008823 287 VLSKVPIMVVEGNHEYEEQAENRTFVAYTSRFAFPSKESGSLSKFYYSFNAGDQYKWLEEDLANVEREVTPWLVATWHAP 366 (552)
Q Consensus 287 l~~~iP~~~v~GNHE~~~~~~~~~f~~y~~rF~~P~~~~~~~~~~yYsfd~G~Q~~WL~~~L~~~~r~~~pwiIV~~H~P 366 (552)
+ ..|++.|.||||... ..+|.. ..+. ...+.|.+.|-.
T Consensus 50 ~--~~~~~~V~GN~D~~~-------------~~~~~~---------~~~~------------------~~g~~i~l~Hg~ 87 (158)
T TIGR00040 50 L--AAKVIAVRGNNDGER-------------DELPEE---------EIFE------------------AEGIDFGLVHGD 87 (158)
T ss_pred h--CCceEEEccCCCchh-------------hhCCcc---------eEEE------------------ECCEEEEEEeCc
Confidence 2 458999999999731 112211 0111 123578888876
Q ss_pred ccccCcCcccchHHHHHHHHHHHHHcCCcEEEEccccCceeeeecccCccCCCCCeEEEeCCCCc
Q 008823 367 WYSTYKAHYREAECMRVAMEDLLYKYGVDVVFNGHVHAYERSNRVYNYTLDPCGPVHITVGDGGN 431 (552)
Q Consensus 367 ~y~s~~~~~~~~~~~r~~l~~ll~~y~VdlvlsGH~H~yeR~~pv~n~~~~~~g~vyiv~G~gG~ 431 (552)
.+.... . ...++.+..+.++|++++||+|.-.... -++++++..|+.|.
T Consensus 88 ~~~~~~----~----~~~l~~~~~~~~~d~vi~GHtH~~~~~~--------~~~~~~iNpGs~~~ 136 (158)
T TIGR00040 88 LVYPRG----D----LLVLEYLAKELGVDVLIFGHTHIPVAEE--------LRGILLINPGSLTG 136 (158)
T ss_pred ccccCC----C----HHHHHHHHhccCCCEEEECCCCCCccEE--------ECCEEEEECCcccc
Confidence 433211 1 1244555567789999999999754321 24678888787665
No 40
>TIGR03768 RPA4764 metallophosphoesterase, RPA4764 family. This model describes a small collection of probable metallophosphoresterases, related to pfam00149. Members of this protein family usually have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. This model and TIGR03767 divide a narrow clade of pfam00149-related enzymes.
Probab=98.84 E-value=4.8e-08 Score=103.75 Aligned_cols=66 Identities=18% Similarity=0.272 Sum_probs=47.7
Q ss_pred HHHHHHHHHHhhcccCCCCEEEEEeCCcccccCcCcc---c----------chHHHHHHHHHHHHHc-CCcEEEEccccC
Q 008823 339 DQYKWLEEDLANVEREVTPWLVATWHAPWYSTYKAHY---R----------EAECMRVAMEDLLYKY-GVDVVFNGHVHA 404 (552)
Q Consensus 339 ~Q~~WL~~~L~~~~r~~~pwiIV~~H~P~y~s~~~~~---~----------~~~~~r~~l~~ll~~y-~VdlvlsGH~H~ 404 (552)
+|++||+++|+.+.. +.+++|+++|+|+.+...... . .....-.+|..+|.+| +|-++|+||.|.
T Consensus 332 eQLaWLe~~La~a~a-~~p~VVV~hHpPi~t~gi~~md~w~~~~~~~~~~L~n~~~~~eLlaLL~~hPnVla~LsGHvHr 410 (492)
T TIGR03768 332 KRWDWLKAELARGQA-DGQLMIIAAHIPIAVSPIGSEMEWWLGAADANPDLQNAVSLTGLVTTLQKYPNLLMWIAGHRHL 410 (492)
T ss_pred HHHHHHHHHHHhCcC-CCceEEEEeCCCcccCCccchhhhccccccccccccccccHHHHHHHHhcCCCeEEEEcCCccc
Confidence 999999999998753 457899999999876221110 0 0001124788999998 698999999996
Q ss_pred c
Q 008823 405 Y 405 (552)
Q Consensus 405 y 405 (552)
-
T Consensus 411 n 411 (492)
T TIGR03768 411 N 411 (492)
T ss_pred c
Confidence 4
No 41
>cd07394 MPP_Vps29 Homo sapiens Vps29 and related proteins, metallophosphatase domain. Vps29 (vacuolar sorting protein 29), also known as vacuolar membrane protein Pep11, is a subunit of the retromer complex which is responsible for the retrieval of mannose-6-phosphate receptors (MPRs) from the endosomes for retrograde transport back to the Golgi. Vps29 has a phosphoesterase fold that acts as a protein interaction scaffold for retromer complex assembly as well as a phosphatase with specificity for the cytoplasmic tail of the MPR. The retromer includes the following 5 subunits: Vps35, Vps26, Vps29, and a dimer of the sorting nexins Vps5 (Snx1), and Vps17 (Snx2). Vps29 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily incl
Probab=98.84 E-value=1.5e-07 Score=89.70 Aligned_cols=132 Identities=14% Similarity=0.357 Sum_probs=80.5
Q ss_pred EEEEEeccCCCCCh---HHHHHHHHH-CCCCEEEEcCccccccccccCCCCCCcccccCCCCCCcccchHHHHHHHHhhh
Q 008823 210 RIAIVGDVGLTYNT---TSTVSHMIS-NRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDYWGRYMQ 285 (552)
Q Consensus 210 rfaviGD~g~~~~~---~~~l~~l~~-~~pDfvl~~GDl~Yad~~~~~G~~~d~~~~~~~~~~~~e~y~~~wd~~~~~l~ 285 (552)
+|+++||+|..... ...+.++.+ .++|.|+|+||++.. ..+ +.++
T Consensus 1 ~i~viSDtHl~~~~~~~~~~~~~~~~~~~~d~iih~GDi~~~---------------------------~~~----~~l~ 49 (178)
T cd07394 1 LVLVIGDLHIPHRASDLPAKFKKLLVPGKIQHVLCTGNLCSK---------------------------ETY----DYLK 49 (178)
T ss_pred CEEEEEecCCCCCchhhHHHHHHHhccCCCCEEEECCCCCCH---------------------------HHH----HHHH
Confidence 48999999965432 223334443 579999999999842 112 2333
Q ss_pred hhhccCCeEEecCCccccccccchhhhhhhcccCCCCCCCCCCCceeEEeehhHHHHHHHHHHhhcccCCCCEEEEEeCC
Q 008823 286 PVLSKVPIMVVEGNHEYEEQAENRTFVAYTSRFAFPSKESGSLSKFYYSFNAGDQYKWLEEDLANVEREVTPWLVATWHA 365 (552)
Q Consensus 286 ~l~~~iP~~~v~GNHE~~~~~~~~~f~~y~~rF~~P~~~~~~~~~~yYsfd~G~Q~~WL~~~L~~~~r~~~pwiIV~~H~ 365 (552)
.+ ..|++.|.||||... .+|.. ..++. ..++|.+.|-
T Consensus 50 ~~--~~~~~~V~GN~D~~~--------------~lp~~---------~~~~~------------------~g~~i~l~HG 86 (178)
T cd07394 50 TI--APDVHIVRGDFDENL--------------NYPET---------KVITV------------------GQFKIGLIHG 86 (178)
T ss_pred hh--CCceEEEECCCCccc--------------cCCCc---------EEEEE------------------CCEEEEEEEC
Confidence 32 247999999999731 23321 11111 2257888885
Q ss_pred cccccCcCcccchHHHHHHHHHHHHHcCCcEEEEccccCceeeeecccCccCCCCCeEEEeCCCCc
Q 008823 366 PWYSTYKAHYREAECMRVAMEDLLYKYGVDVVFNGHVHAYERSNRVYNYTLDPCGPVHITVGDGGN 431 (552)
Q Consensus 366 P~y~s~~~~~~~~~~~r~~l~~ll~~y~VdlvlsGH~H~yeR~~pv~n~~~~~~g~vyiv~G~gG~ 431 (552)
-.+... .. .+.+..++.+.++|++++||+|...... .+|.++|..|+.|.
T Consensus 87 ~~~~~~----~~----~~~~~~~~~~~~~dvii~GHTH~p~~~~--------~~g~~viNPGSv~~ 136 (178)
T cd07394 87 HQVVPW----GD----PDSLAALQRQLDVDILISGHTHKFEAFE--------HEGKFFINPGSATG 136 (178)
T ss_pred CcCCCC----CC----HHHHHHHHHhcCCCEEEECCCCcceEEE--------ECCEEEEECCCCCC
Confidence 332211 01 1234455667899999999999765442 24788888888764
No 42
>cd08166 MPP_Cdc1_like_1 uncharacterized subgroup related to Saccharomyces cerevisiae CDC1, metallophosphatase domain. A functionally uncharacterized subgroup related to the metallophosphatase domain of Saccharomyces cerevisiae Cdc1, S. cerevisiae Ted1 and human MPPE1. Cdc1 is an endoplasmic reticulum-localized transmembrane lipid phosphatase and is a subunit of DNA polymerase delta. TED1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), acts together with Emp24p and Erv25p in cargo exit from the ER. The MPPE1 gene is a candidate susceptibility gene for Bipolar disorder. Proteins in this uncharacterized subgroup belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like R
Probab=98.83 E-value=2.2e-08 Score=96.26 Aligned_cols=109 Identities=16% Similarity=0.313 Sum_probs=68.8
Q ss_pred HHCCCCEEEEcCccccccccccCCCCCCcccccCCCCCCcccchHHHHHHHHhhhhh---hccCCeEEecCCcccccccc
Q 008823 231 ISNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDYWGRYMQPV---LSKVPIMVVEGNHEYEEQAE 307 (552)
Q Consensus 231 ~~~~pDfvl~~GDl~Yad~~~~~G~~~d~~~~~~~~~~~~e~y~~~wd~~~~~l~~l---~~~iP~~~v~GNHE~~~~~~ 307 (552)
...+||+|+++||+++. |...+ ..+|.+..+-+.++ ...+|++.++||||++....
T Consensus 39 ~~l~PD~Vi~lGDL~D~------G~~~~---------------~~e~~e~l~Rf~~If~~~~~~~~~~VpGNHDIG~~~~ 97 (195)
T cd08166 39 NFVQPDIVIFLGDLMDE------GSIAN---------------DDEYYSYVQRFINIFEVPNGTKIIYLPGDNDIGGEEE 97 (195)
T ss_pred hccCCCEEEEeccccCC------CCCCC---------------HHHHHHHHHHHHHHhcCCCCCcEEEECCCCCcCCCCC
Confidence 34599999999999953 33110 12333322222232 35689999999999974321
Q ss_pred chhhhhhhcccCCCCCCCCCCCceeEEeehhHHHHHHHHHHhhcccCCCCEEEEEeCCcccccCcCcccchHHHHHHHHH
Q 008823 308 NRTFVAYTSRFAFPSKESGSLSKFYYSFNAGDQYKWLEEDLANVEREVTPWLVATWHAPWYSTYKAHYREAECMRVAMED 387 (552)
Q Consensus 308 ~~~f~~y~~rF~~P~~~~~~~~~~yYsfd~G~Q~~WL~~~L~~~~r~~~pwiIV~~H~P~y~s~~~~~~~~~~~r~~l~~ 387 (552)
.. ...-..||. + -| |++.|.|...... ..+..
T Consensus 98 ~~-~~~~v~RF~--------------------------~----------~F-i~lsH~P~~~~~~----------~~~~~ 129 (195)
T cd08166 98 DP-IESKIRRFE--------------------------K----------YF-IMLSHVPLLAEGG----------QALKH 129 (195)
T ss_pred Cc-CHHHHHHHH--------------------------H----------hh-eeeeccccccccc----------HHHHH
Confidence 11 122223331 0 11 8999999876321 25667
Q ss_pred HHHHcCCcEEEEccccCceee
Q 008823 388 LLYKYGVDVVFNGHVHAYERS 408 (552)
Q Consensus 388 ll~~y~VdlvlsGH~H~yeR~ 408 (552)
++.+++++++|+||.|.+.+.
T Consensus 130 ~~~~~~p~~Ifs~H~H~s~~~ 150 (195)
T cd08166 130 VVTDLDPDLIFSAHRHKSSIF 150 (195)
T ss_pred HHHhcCceEEEEcCccceeeE
Confidence 888999999999999998765
No 43
>cd07389 MPP_PhoD Bacillus subtilis PhoD and related proteins, metallophosphatase domain. PhoD (also known as alkaline phosphatase D/APaseD in Bacillus subtilis) is a secreted phosphodiesterase encoded by phoD of the Pho regulon in Bacillus subtilis. PhoD homologs are found in prokaryotes, eukaryotes, and archaea. PhoD contains a twin arginine (RR) motif and is transported by the Tat (Twin-arginine translocation) translocation pathway machinery (TatAyCy). This family also includes the Fusarium oxysporum Fso1 protein. PhoD belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF
Probab=98.83 E-value=3.2e-08 Score=97.73 Aligned_cols=176 Identities=21% Similarity=0.205 Sum_probs=101.4
Q ss_pred EEEEEeccCCCCChHHHHHHHH----HCCCCEEEEcCccccccccccCCCCCC--cccccCCCCCCcccchHHHHHHH--
Q 008823 210 RIAIVGDVGLTYNTTSTVSHMI----SNRPDLILLVGDVTYANLYLTNGTGSD--CYACSFANSPIHETYQPRWDYWG-- 281 (552)
Q Consensus 210 rfaviGD~g~~~~~~~~l~~l~----~~~pDfvl~~GDl~Yad~~~~~G~~~d--~~~~~~~~~~~~e~y~~~wd~~~-- 281 (552)
||++.++.+...........+. +.+|||+|++||.+|+|.......... -...........+.|+.++..+.
T Consensus 1 r~a~~SC~~~~~~~~~~~~~~~~~~~~~~~d~~l~~GD~IY~d~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~Y~~~~~~ 80 (228)
T cd07389 1 RFAFGSCNKYESGYFNAYRALAYDHSEEDPDLFLHLGDQIYADDVGGLMPALIEGRPLEPAHEALTLEEYRERYRQYRSD 80 (228)
T ss_pred CEEEEECCCCCCCCcHHHHHHhhhccccCCCEEEEcCCeecccCCCcccccccCCcCcCCcccccCHHHHHHHHHHHcCC
Confidence 5788888887765555555554 679999999999999874211000000 00000001123344555554443
Q ss_pred HhhhhhhccCCeEEecCCccccccccch----------------hhhhhhcccCCCCCCCC--CCCceeEEeehhHHHHH
Q 008823 282 RYMQPVLSKVPIMVVEGNHEYEEQAENR----------------TFVAYTSRFAFPSKESG--SLSKFYYSFNAGDQYKW 343 (552)
Q Consensus 282 ~~l~~l~~~iP~~~v~GNHE~~~~~~~~----------------~f~~y~~rF~~P~~~~~--~~~~~yYsfd~G~Q~~W 343 (552)
..++.+.+++|++.++.+||+..+.+.. ...+|......+..... .....|++|.+|...+
T Consensus 81 p~~~~~~~~~p~~~iwDDHDi~~n~~~~~~~~~~~~~~~~~~~~a~~ay~e~~~~~~~~~~~~~~~~~y~~~~~G~~~~- 159 (228)
T cd07389 81 PDLQRLLAQVPTIGIWDDHDIGDNWGGDGAWVQDSPVFYARKAAARQAYLEFQPVRNPSPRRGGRGGIYRSFRFGDLVD- 159 (228)
T ss_pred HHHHHHhhcCCEEEeccccccccccccccccccCcchHHHHHHHHHHHHHHHcCCCCCCccCCCCceEEEEEecCCcce-
Confidence 3467778899999999999998664431 12234443333332221 3467899999873211
Q ss_pred HHHHHhhcccCCCCEEEEE---eCCcccccCcCcccchHHHHHHHHHHHHHcCCc--EEEEccccCceee
Q 008823 344 LEEDLANVEREVTPWLVAT---WHAPWYSTYKAHYREAECMRVAMEDLLYKYGVD--VVFNGHVHAYERS 408 (552)
Q Consensus 344 L~~~L~~~~r~~~pwiIV~---~H~P~y~s~~~~~~~~~~~r~~l~~ll~~y~Vd--lvlsGH~H~yeR~ 408 (552)
+|++ .|+ ..+......|+.+..++.+.++. ++|+|++|..+-.
T Consensus 160 ---------------~~~lD~R~~R-------d~W~~~~~er~~l~~~~~~~~~~~vv~lSGDvH~~~~~ 207 (228)
T cd07389 160 ---------------LILLDTRTYR-------DSWDGYPAERERLLDLLAKRKIKNVVFLSGDVHLAEAS 207 (228)
T ss_pred ---------------EEEEeccccc-------ccccccHHHHHHHHHHHHHhCCCCeEEEecHHHHHHHh
Confidence 1111 111 33444455677887876665433 7899999976554
No 44
>cd08165 MPP_MPPE1 human MPPE1 and related proteins, metallophosphatase domain. MPPE1 is a functionally uncharacterized metallophosphatase domain-containing protein. The MPPE1 gene is located on chromosome 18 and is a candidate susceptibility gene for Bipolar disorder. MPPE1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to
Probab=98.79 E-value=4.3e-08 Score=91.51 Aligned_cols=110 Identities=25% Similarity=0.470 Sum_probs=64.8
Q ss_pred HHCCCCEEEEcCccccccccccCCCCCCcccccCCCCCCcccchHHHHHHHHhhhhhh---ccCCeEEecCCcccccccc
Q 008823 231 ISNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDYWGRYMQPVL---SKVPIMVVEGNHEYEEQAE 307 (552)
Q Consensus 231 ~~~~pDfvl~~GDl~Yad~~~~~G~~~d~~~~~~~~~~~~e~y~~~wd~~~~~l~~l~---~~iP~~~v~GNHE~~~~~~ 307 (552)
.+.+||+|+++||++.. +... . ...|..+...+..+. ..+|++.++||||......
T Consensus 35 ~~~~pd~vv~~GDl~~~------~~~~--------------~-~~~~~~~~~~~~~~~~~~~~~~i~~v~GNHD~~~~~~ 93 (156)
T cd08165 35 WLLQPDVVFVLGDLFDE------GKWS--------------T-DEEWEDYVERFKKMFGHPPDLPLHVVVGNHDIGFHYE 93 (156)
T ss_pred HhcCCCEEEECCCCCCC------CccC--------------C-HHHHHHHHHHHHHHhccCCCCeEEEEcCCCCcCCCCc
Confidence 34699999999999953 2110 0 134544333333332 2589999999999842110
Q ss_pred chhhhhhhcccCCCCCCCCCCCceeEEeehhHHHHHHHHHHhhcccCCCCEEEEEeCCcccccCcCcccchHHHHHHHHH
Q 008823 308 NRTFVAYTSRFAFPSKESGSLSKFYYSFNAGDQYKWLEEDLANVEREVTPWLVATWHAPWYSTYKAHYREAECMRVAMED 387 (552)
Q Consensus 308 ~~~f~~y~~rF~~P~~~~~~~~~~yYsfd~G~Q~~WL~~~L~~~~r~~~pwiIV~~H~P~y~s~~~~~~~~~~~r~~l~~ 387 (552)
.+. .-.+++++. .|++.|.|.+.
T Consensus 94 ------------~~~----------------~~~~~~~~~-----------~~~l~H~p~~~------------------ 116 (156)
T cd08165 94 ------------MTT----------------YKLERFEKV-----------FILLQHFPLYR------------------ 116 (156)
T ss_pred ------------cCH----------------HHHHHHHHH-----------eeeeeCChHHH------------------
Confidence 000 011112211 28899999632
Q ss_pred HHHHcCCcEEEEccccCceeeeecccCccCCCCCeEEE
Q 008823 388 LLYKYGVDVVFNGHVHAYERSNRVYNYTLDPCGPVHIT 425 (552)
Q Consensus 388 ll~~y~VdlvlsGH~H~yeR~~pv~n~~~~~~g~vyiv 425 (552)
++.+++++++|+||.|..-+.. ..+|+.+|+
T Consensus 117 ~~~~~~~~~~l~GH~H~~~~~~-------~~~~~~e~~ 147 (156)
T cd08165 117 LLQWLKPRLVLSGHTHSFCEVT-------HPDGTPEVT 147 (156)
T ss_pred HHHhhCCCEEEEcccCCCceeE-------EECCEEEEE
Confidence 4456788999999999965653 234555554
No 45
>cd07403 MPP_TTHA0053 Thermus thermophilus TTHA0053 and related proteins, metallophosphatase domain. TTHA0053 is an uncharacterized Thermus thermophilus protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=98.74 E-value=3.8e-08 Score=88.87 Aligned_cols=49 Identities=18% Similarity=0.103 Sum_probs=31.4
Q ss_pred EEEEeCCcccccCcCcccchHHHHHHHHHHHHHcCCcEEEEccccCceee
Q 008823 359 LVATWHAPWYSTYKAHYREAECMRVAMEDLLYKYGVDVVFNGHVHAYERS 408 (552)
Q Consensus 359 iIV~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~y~VdlvlsGH~H~yeR~ 408 (552)
.|++.|+|++...... .....-.+.+.+++.+++++++|+||+|.....
T Consensus 58 ~Ilv~H~pp~~~~~~~-~~~~~g~~~l~~~l~~~~~~~vl~GH~H~~~~~ 106 (129)
T cd07403 58 DILLTHAPPAGIGDGE-DFAHRGFEAFLDFIDRFRPKLFIHGHTHLNYGY 106 (129)
T ss_pred CEEEECCCCCcCcCcc-cccccCHHHHHHHHHHHCCcEEEEcCcCCCcCc
Confidence 3677777776432210 000011456778888999999999999976554
No 46
>TIGR01854 lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase. This model represents LpxH, UDP-2,3-diacylglucosamine hydrolase, and essential enzyme in E. coli that catalyzes the fourth step in lipid A biosynthesis. Note that Pseudomonas aeruginosa has both a member of this family that shares this function and a more distant homolog, designated LpxH2, that does not. Many species that produce lipid A lack an lpxH gene in this family; some of those species have an lpxH2 gene instead, although for which the function is unknown.
Probab=98.72 E-value=1.5e-07 Score=93.43 Aligned_cols=45 Identities=24% Similarity=0.386 Sum_probs=32.5
Q ss_pred HHHHHHHHHcCCcEEEEccccCceeeeecccCccCCCCCeEEEeCCCCc
Q 008823 383 VAMEDLLYKYGVDVVFNGHVHAYERSNRVYNYTLDPCGPVHITVGDGGN 431 (552)
Q Consensus 383 ~~l~~ll~~y~VdlvlsGH~H~yeR~~pv~n~~~~~~g~vyiv~G~gG~ 431 (552)
..+++++.++++|++++||+|.-... +..+ +..+..|++.|++-.
T Consensus 175 ~~~~~~~~~~~~~~~i~GHtH~~~~~-~~~~---~~~~~~~~~lgdW~~ 219 (231)
T TIGR01854 175 AEVAAVMRRYGVDRLIHGHTHRPAIH-PLQA---DGQPATRIVLGDWYR 219 (231)
T ss_pred HHHHHHHHHcCCCEEEECCccCccee-eccc---CCCccEEEEECCCcc
Confidence 45677888899999999999987654 2211 223568999999843
No 47
>PRK09453 phosphodiesterase; Provisional
Probab=98.70 E-value=5.8e-07 Score=85.84 Aligned_cols=148 Identities=20% Similarity=0.247 Sum_probs=81.3
Q ss_pred eEEEEEeccCCCCCh-HHHHHHHHHCCCCEEEEcCccccccccccCCCCCCcccccCCCCCCcccchHHHHHHHHhhhhh
Q 008823 209 SRIAIVGDVGLTYNT-TSTVSHMISNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDYWGRYMQPV 287 (552)
Q Consensus 209 ~rfaviGD~g~~~~~-~~~l~~l~~~~pDfvl~~GDl~Yad~~~~~G~~~d~~~~~~~~~~~~e~y~~~wd~~~~~l~~l 287 (552)
+|++++||+|..... ...++.+.+.++|.|+++||++.. |. ..+..+.|+ ..+..+.++.+
T Consensus 1 mri~viSD~Hg~~~~~~~~l~~~~~~~~d~ii~lGDi~~~------~~----------~~~~~~~~~--~~~~~~~l~~~ 62 (182)
T PRK09453 1 MKLMFASDTHGSLPATEKALELFAQSGADWLVHLGDVLYH------GP----------RNPLPEGYA--PKKVAELLNAY 62 (182)
T ss_pred CeEEEEEeccCCHHHHHHHHHHHHhcCCCEEEEccccccc------Cc----------CCCCccccC--HHHHHHHHHhc
Confidence 489999999965332 234444556789999999999842 11 011112222 12233333332
Q ss_pred hccCCeEEecCCccccccccchhhhhhhcccCCCCCCCCCCCceeEEeehhHHHHHHHHHHhhcccCCCCEEEEEeCCcc
Q 008823 288 LSKVPIMVVEGNHEYEEQAENRTFVAYTSRFAFPSKESGSLSKFYYSFNAGDQYKWLEEDLANVEREVTPWLVATWHAPW 367 (552)
Q Consensus 288 ~~~iP~~~v~GNHE~~~~~~~~~f~~y~~rF~~P~~~~~~~~~~yYsfd~G~Q~~WL~~~L~~~~r~~~pwiIV~~H~P~ 367 (552)
..+++.+.||||.... ... ..+|.. ..|..+. .+ ...|++.|...
T Consensus 63 --~~~v~~V~GNhD~~~~-------~~~--~~~~~~------~~~~~~~--------------l~----g~~i~l~HG~~ 107 (182)
T PRK09453 63 --ADKIIAVRGNCDSEVD-------QML--LHFPIM------APYQQVL--------------LE----GKRLFLTHGHL 107 (182)
T ss_pred --CCceEEEccCCcchhh-------hhc--cCCccc------CceEEEE--------------EC----CeEEEEECCCC
Confidence 3689999999996321 000 011110 0011111 11 13577888654
Q ss_pred cccCcCcccchHHHHHHHHHHHHHcCCcEEEEccccCceeeeecccCccCCCCCeEEEeCCCCcc
Q 008823 368 YSTYKAHYREAECMRVAMEDLLYKYGVDVVFNGHVHAYERSNRVYNYTLDPCGPVHITVGDGGNR 432 (552)
Q Consensus 368 y~s~~~~~~~~~~~r~~l~~ll~~y~VdlvlsGH~H~yeR~~pv~n~~~~~~g~vyiv~G~gG~~ 432 (552)
+... .+....++|++++||+|.-.... -+|..+|..|+.|.+
T Consensus 108 ~~~~---------------~~~~~~~~d~vi~GHtH~p~~~~--------~~~~~~iNpGs~~~p 149 (182)
T PRK09453 108 YGPE---------------NLPALHDGDVLVYGHTHIPVAEK--------QGGIILFNPGSVSLP 149 (182)
T ss_pred CChh---------------hcccccCCCEEEECCCCCCcceE--------ECCEEEEECCCcccc
Confidence 3210 01234578999999999743321 247888988887753
No 48
>cd07384 MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. This group also contains Saccharomyces cerevisiae TED1 (Trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), which acts together wit
Probab=98.69 E-value=1.6e-07 Score=89.03 Aligned_cols=32 Identities=25% Similarity=0.327 Sum_probs=26.3
Q ss_pred EEEeCCcccccCcCcccchHHHHHHHHHHHHHcCCcEEEEccccCceeee
Q 008823 360 VATWHAPWYSTYKAHYREAECMRVAMEDLLYKYGVDVVFNGHVHAYERSN 409 (552)
Q Consensus 360 IV~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~y~VdlvlsGH~H~yeR~~ 409 (552)
|++.|.|.+. ++.+.+++++|+||.|.+-+..
T Consensus 119 i~l~H~p~~~------------------~~~~~~~~~~lsGH~H~~~~~~ 150 (171)
T cd07384 119 ILLTHIPLYR------------------LLDTIKPVLILSGHDHDQCEVV 150 (171)
T ss_pred eeEECCccHH------------------HHhccCceEEEeCcccCCeEEE
Confidence 8999999632 5677899999999999986664
No 49
>COG2129 Predicted phosphoesterases, related to the Icc protein [General function prediction only]
Probab=98.63 E-value=4.8e-07 Score=87.67 Aligned_cols=173 Identities=18% Similarity=0.224 Sum_probs=94.9
Q ss_pred CeEEEEEeccCCCCChH-HHHHHHHHCCCCEEEEcCccccccccccCCCCCCcccccCCCCCCcccchHHHHHHHHhhhh
Q 008823 208 PSRIAIVGDVGLTYNTT-STVSHMISNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDYWGRYMQP 286 (552)
Q Consensus 208 p~rfaviGD~g~~~~~~-~~l~~l~~~~pDfvl~~GDl~Yad~~~~~G~~~d~~~~~~~~~~~~e~y~~~wd~~~~~l~~ 286 (552)
.+|+++++|+|...... +.++.+...++|+++.+||++|.+ .|... ..-+.. + ++.
T Consensus 3 ~mkil~vtDlHg~~~~~~k~~~~~~~~~~D~lviaGDlt~~~----~~~~~-------------~~~~~~---~---~e~ 59 (226)
T COG2129 3 KMKILAVTDLHGSEDSLKKLLNAAADIRADLLVIAGDLTYFH----FGPKE-------------VAEELN---K---LEA 59 (226)
T ss_pred cceEEEEeccccchHHHHHHHHHHhhccCCEEEEecceehhh----cCchH-------------HHHhhh---H---HHH
Confidence 58999999999875543 344444556999999999999543 12210 000000 1 344
Q ss_pred hh-ccCCeEEecCCccccccccchhhhh-----hhcccCCC-----C-CCCC-CCCceeEEeehhHHHHHHHHHHhhccc
Q 008823 287 VL-SKVPIMVVEGNHEYEEQAENRTFVA-----YTSRFAFP-----S-KESG-SLSKFYYSFNAGDQYKWLEEDLANVER 353 (552)
Q Consensus 287 l~-~~iP~~~v~GNHE~~~~~~~~~f~~-----y~~rF~~P-----~-~~~~-~~~~~yYsfd~G~Q~~WL~~~L~~~~r 353 (552)
+. ..+|+++++||=|-..-.. -... .......- . .+++ ...+.+..|..-+-+.-|++-+++.+.
T Consensus 60 l~~~~~~v~avpGNcD~~~v~~--~l~~~~~~v~~~v~~i~~~~~~G~Ggsn~tp~nt~~e~~E~~I~s~l~~~v~~~~~ 137 (226)
T COG2129 60 LKELGIPVLAVPGNCDPPEVID--VLKNAGVNVHGRVVEIGGYGFVGFGGSNPTPFNTPREFSEDEIYSKLKSLVKKADN 137 (226)
T ss_pred HHhcCCeEEEEcCCCChHHHHH--HHHhcccccccceEEecCcEEEEecccCCCCCCCccccCHHHHHHHHHHHHhcccC
Confidence 43 6799999999977631110 0000 00000000 0 0000 011222223221334445555555432
Q ss_pred CCCCEEEEEeCCcccccCcCcccc-hHHHHHHHHHHHHHcCCcEEEEccccCceee
Q 008823 354 EVTPWLVATWHAPWYSTYKAHYRE-AECMRVAMEDLLYKYGVDVVFNGHVHAYERS 408 (552)
Q Consensus 354 ~~~pwiIV~~H~P~y~s~~~~~~~-~~~~r~~l~~ll~~y~VdlvlsGH~H~yeR~ 408 (552)
.. .|+..|.|+|.+......+ ...-..++.+++++.++-+.++||+|.+.-.
T Consensus 138 ~~---~Il~~HaPP~gt~~d~~~g~~hvGS~~vr~~ieefqP~l~i~GHIHEs~G~ 190 (226)
T COG2129 138 PV---NILLTHAPPYGTLLDTPSGYVHVGSKAVRKLIEEFQPLLGLHGHIHESRGI 190 (226)
T ss_pred cc---eEEEecCCCCCccccCCCCccccchHHHHHHHHHhCCceEEEeeecccccc
Confidence 11 3999999999875432122 1112467888999999999999999985444
No 50
>cd08164 MPP_Ted1 Saccharomyces cerevisiae Ted1 and related proteins, metallophosphatase domain. Saccharomyces cerevisiae Ted1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1) is a metallophosphatase domain-containing protein which acts together with Emp24p and Erv25p in cargo exit from the ER. Ted1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the
Probab=98.53 E-value=3e-07 Score=88.29 Aligned_cols=32 Identities=19% Similarity=0.333 Sum_probs=25.1
Q ss_pred EEEeCCcccccCcCcccchHHHHHHHHHHHHHcCCcEEEEccccCceeee
Q 008823 360 VATWHAPWYSTYKAHYREAECMRVAMEDLLYKYGVDVVFNGHVHAYERSN 409 (552)
Q Consensus 360 IV~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~y~VdlvlsGH~H~yeR~~ 409 (552)
|++.|.|.+. ...+.+++++||||+|.-++..
T Consensus 129 ilL~H~P~~~------------------~~~~~~~dl~lSGHtHgGqi~~ 160 (193)
T cd08164 129 ILLTHVPLYK------------------IFLEGKPGLILTGHDHEGCDYQ 160 (193)
T ss_pred EEEEccccee------------------ccccCCCCEEEeCccCCCeEEE
Confidence 8999999765 1124589999999999987764
No 51
>PF14582 Metallophos_3: Metallophosphoesterase, calcineurin superfamily; PDB: 1UF3_B 2YVT_A.
Probab=98.51 E-value=5.2e-07 Score=87.30 Aligned_cols=181 Identities=24% Similarity=0.319 Sum_probs=77.0
Q ss_pred CeEEEEEeccCCCCCh-HHHHHHHHHCCCCEEEEcCccccccccccCCCCCCccc-----ccCCCCC-Cc--ccchH-HH
Q 008823 208 PSRIAIVGDVGLTYNT-TSTVSHMISNRPDLILLVGDVTYANLYLTNGTGSDCYA-----CSFANSP-IH--ETYQP-RW 277 (552)
Q Consensus 208 p~rfaviGD~g~~~~~-~~~l~~l~~~~pDfvl~~GDl~Yad~~~~~G~~~d~~~-----~~~~~~~-~~--e~y~~-~w 277 (552)
+-+++.++|.+..... .+.++.+.+.++|+|+++||+.-+.. . .+-|. ...|+.+ +. +.|+. ..
T Consensus 5 ~~kilA~s~~~g~~e~l~~l~~~~~e~~~D~~v~~G~~~~~~a-----~-~~e~~~a~~~~r~p~k~~i~~e~~~~~e~~ 78 (255)
T PF14582_consen 5 VRKILAISNFRGDFELLERLVEVIPEKGPDAVVFVGDLLKAEA-----R-SDEYERAQEEQREPDKSEINEEECYDSEAL 78 (255)
T ss_dssp --EEEEEE--TT-HHHHHHHHHHHHHHT-SEEEEES-SS-TCH-----H-HHHHHHHHHTT----THHHHHHHHHHHHHH
T ss_pred chhheeecCcchHHHHHHHHHhhccccCCCEEEEeccccccch-----h-hhHHHHHhhhccCcchhhhhhhhhhhHHHH
Confidence 4589999998865332 23344445569999999999974311 0 00000 0001100 00 00100 01
Q ss_pred HHHHHhhhhhhccCCeEEecCCccccccccchhh-hhhhcccCCCCC----CCCCCCceeEEee-hh-------------
Q 008823 278 DYWGRYMQPVLSKVPIMVVEGNHEYEEQAENRTF-VAYTSRFAFPSK----ESGSLSKFYYSFN-AG------------- 338 (552)
Q Consensus 278 d~~~~~l~~l~~~iP~~~v~GNHE~~~~~~~~~f-~~y~~rF~~P~~----~~~~~~~~yYsfd-~G------------- 338 (552)
+.+++.+.. ..+|.+++|||||..... .+ .+|....-.|.- ++-..-+..|.+- .|
T Consensus 79 ~~ff~~L~~--~~~p~~~vPG~~Dap~~~---~lr~a~~~e~v~p~~~~vH~sf~~~~g~y~v~G~GGeI~~~~~~~~~~ 153 (255)
T PF14582_consen 79 DKFFRILGE--LGVPVFVVPGNMDAPERF---FLREAYNAEIVTPHIHNVHESFFFWKGEYLVAGMGGEITDDQREEEFK 153 (255)
T ss_dssp HHHHHHHHC--C-SEEEEE--TTS-SHHH---HHHHHHHCCCC-TTEEE-CTCEEEETTTEEEEEE-SEEESSS-BCSSS
T ss_pred HHHHHHHHh--cCCcEEEecCCCCchHHH---HHHHHhccceeccceeeeeeeecccCCcEEEEecCccccCCCcccccc
Confidence 234444443 479999999999984211 00 111111101100 0000000011110 11
Q ss_pred -----HHHHHHHHHHhhcccCCCCEEEEEeCCcc-cccCcCcccchHHHHHHHHHHHHHcCCcEEEEccccCcee
Q 008823 339 -----DQYKWLEEDLANVEREVTPWLVATWHAPW-YSTYKAHYREAECMRVAMEDLLYKYGVDVVFNGHVHAYER 407 (552)
Q Consensus 339 -----~Q~~WL~~~L~~~~r~~~pwiIV~~H~P~-y~s~~~~~~~~~~~r~~l~~ll~~y~VdlvlsGH~H~yeR 407 (552)
...+|..+.|..++ ..-+|+.+|.|+ +.....+.. .+++.+++++|+.++||+||+|.-.-
T Consensus 154 LrYP~weaey~lk~l~elk---~~r~IlLfhtpPd~~kg~~h~G-----S~~V~dlIk~~~P~ivl~Ghihe~~~ 220 (255)
T PF14582_consen 154 LRYPAWEAEYSLKFLRELK---DYRKILLFHTPPDLHKGLIHVG-----SAAVRDLIKTYNPDIVLCGHIHESHG 220 (255)
T ss_dssp -EEEHHHHHHHHGGGGGCT---SSEEEEEESS-BTBCTCTBTTS-----BHHHHHHHHHH--SEEEE-SSS-EE-
T ss_pred ccchHHHHHHHHHHHHhcc---cccEEEEEecCCccCCCccccc-----HHHHHHHHHhcCCcEEEecccccchh
Confidence 23445556666653 234788899998 443323322 25778899999999999999997543
No 52
>cd07398 MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain. YbbF/LpxH is an Escherichia coli UDP-2,3-diacylglucosamine hydrolase thought to catalyze the fourth step of lipid A biosynthesis, in which a precursor UDP-2,3-diacylglucosamine is hydrolyzed to yield 2,3-diacylglucosamine 1-phosphate and UMP. YbbF belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues l
Probab=98.48 E-value=1.6e-06 Score=84.56 Aligned_cols=41 Identities=32% Similarity=0.379 Sum_probs=31.6
Q ss_pred HHHHHHHHHHHcCCcEEEEccccCceeeeecccCccCCCCCeEEEeCCC
Q 008823 381 MRVAMEDLLYKYGVDVVFNGHVHAYERSNRVYNYTLDPCGPVHITVGDG 429 (552)
Q Consensus 381 ~r~~l~~ll~~y~VdlvlsGH~H~yeR~~pv~n~~~~~~g~vyiv~G~g 429 (552)
....+..++.+++++++++||+|...... ..+..|+..|+.
T Consensus 177 ~~~~~~~~~~~~~~~~~i~GH~H~~~~~~--------~~~~~~~n~G~W 217 (217)
T cd07398 177 FEEAVARLARRKGVDGVICGHTHRPALHE--------LDGKLYINLGDW 217 (217)
T ss_pred HHHHHHHHHHhcCCCEEEECCCCCCCeEE--------ECCEEEEECCCC
Confidence 35566777889999999999999876653 237788888863
No 53
>COG1768 Predicted phosphohydrolase [General function prediction only]
Probab=98.42 E-value=3.8e-06 Score=78.18 Aligned_cols=78 Identities=18% Similarity=0.168 Sum_probs=50.3
Q ss_pred HHHHHHHH-HHhhcccCCCCEEEEEeCCcccccCcCcccchHHHHHHHHHHHHHcCCcEEEEccccCceeeeecccCccC
Q 008823 339 DQYKWLEE-DLANVEREVTPWLVATWHAPWYSTYKAHYREAECMRVAMEDLLYKYGVDVVFNGHVHAYERSNRVYNYTLD 417 (552)
Q Consensus 339 ~Q~~WL~~-~L~~~~r~~~pwiIV~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~y~VdlvlsGH~H~yeR~~pv~n~~~~ 417 (552)
..+.-|+. ..++.. +...-.|||.|.|+++..... ..+.+++++++|+.++.||.|.-.|-.+-.. +
T Consensus 141 RE~~RLrlsa~a~l~-k~~~~fivM~HYPP~s~~~t~--------~~~sevlee~rv~~~lyGHlHgv~~p~~~~s---~ 208 (230)
T COG1768 141 REIGRLRLSADAALP-KGVSKFIVMTHYPPFSDDGTP--------GPFSEVLEEGRVSKCLYGHLHGVPRPNIGFS---N 208 (230)
T ss_pred HHHHHHHHHHHHhcc-cCcCeEEEEEecCCCCCCCCC--------cchHHHHhhcceeeEEeeeccCCCCCCCCcc---c
Confidence 33444544 223333 334458999999999864332 2566788899999999999999887643222 2
Q ss_pred CCCCeEEEeCC
Q 008823 418 PCGPVHITVGD 428 (552)
Q Consensus 418 ~~g~vyiv~G~ 428 (552)
-.|+-|+.+-+
T Consensus 209 v~Gi~y~Lvaa 219 (230)
T COG1768 209 VRGIEYMLVAA 219 (230)
T ss_pred ccCceEEEEec
Confidence 23676665443
No 54
>cd00845 MPP_UshA_N_like Escherichia coli UshA-like family, N-terminal metallophosphatase domain. This family includes the bacterial enzyme UshA, and related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich
Probab=98.38 E-value=2.1e-06 Score=86.04 Aligned_cols=38 Identities=16% Similarity=0.179 Sum_probs=28.1
Q ss_pred eEEEEEeccCCCC-------Ch---HHHHHHHHHCCCC-EEEEcCcccc
Q 008823 209 SRIAIVGDVGLTY-------NT---TSTVSHMISNRPD-LILLVGDVTY 246 (552)
Q Consensus 209 ~rfaviGD~g~~~-------~~---~~~l~~l~~~~pD-fvl~~GDl~Y 246 (552)
++|++++|+|... +. ...++++.+.++| +++..||++.
T Consensus 1 l~i~~~sD~hg~~~~~~~~~g~~~l~~~v~~~~~~~~~~l~v~~GD~~~ 49 (252)
T cd00845 1 LTILHTNDLHGHFEPAGGVGGAARLATLIKEERAENENTLLLDAGDNFD 49 (252)
T ss_pred CEEEEecccccCccccCCcCCHHHHHHHHHHHHhcCCCeEEEeCCccCC
Confidence 4899999999654 11 3456666667788 7799999985
No 55
>TIGR00583 mre11 DNA repair protein (mre11). All proteins in this family for which functions are known are subunits of a nuclease complex made up of multiple proteins including MRE11 and RAD50 homologs. The functions of this nuclease complex include recombinational repair and non-homolgous end joining. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). The proteins in this family are distantly related to proteins in the SbcCD complex of bacteria.
Probab=98.29 E-value=5.4e-06 Score=88.72 Aligned_cols=40 Identities=25% Similarity=0.314 Sum_probs=30.4
Q ss_pred CeEEEEEeccCCCCCh-------------HHHHHHHHHCCCCEEEEcCccccc
Q 008823 208 PSRIAIVGDVGLTYNT-------------TSTVSHMISNRPDLILLVGDVTYA 247 (552)
Q Consensus 208 p~rfaviGD~g~~~~~-------------~~~l~~l~~~~pDfvl~~GDl~Ya 247 (552)
.+||++++|+|.+... .++++.+.++++|+||++||+...
T Consensus 3 ~mKIlh~SD~HlG~~~~~~~r~~D~~~~f~eil~~a~~~~vD~VLiaGDLFd~ 55 (405)
T TIGR00583 3 TIRILVSTDNHVGYGENDPVRGDDSWNTFEEVLQIAKEQDVDMILLGGDLFHE 55 (405)
T ss_pred ceEEEEEcCCCCCCccCCchhhhhHHHHHHHHHHHHHHcCCCEEEECCccCCC
Confidence 5899999999987421 223444556799999999999953
No 56
>cd07410 MPP_CpdB_N Escherichia coli CpdB and related proteins, N-terminal metallophosphatase domain. CpdB is a bacterial periplasmic protein with an N-terminal metallophosphatase domain and a C-terminal 3'-nucleotidase domain. This alignment model represents the N-terminal metallophosphatase domain, which has 2',3'-cyclic phosphodiesterase activity, hydrolyzing the 2',3'-cyclic phosphates of adenosine, guanosine, cytosine and uridine to yield nucleoside and phosphate. CpdB also hydrolyzes the chromogenic substrates p-nitrophenyl phosphate (PNPP), bis(PNPP) and p-nitrophenyl phosphorylcholine (NPPC). CpdB is thought to play a scavenging role during RNA hydrolysis by converting the non-transportable nucleotides produced by RNaseI to nucleosides which can easily enter a cell for use as a carbon source. This family also includes YfkN, a Bacillus subtilis nucleotide phosphoesterase with two copies of each of the metallophosphatase and 3'-nucleotidase domains. The N-terminal metallophos
Probab=98.21 E-value=2.4e-05 Score=79.79 Aligned_cols=61 Identities=20% Similarity=0.152 Sum_probs=35.9
Q ss_pred HHHHHHHHHhhcccCCCCEEEEEeCCcccccCcCcccchHHHHHHHHHHHHH-cCCcEEEEccccCcee
Q 008823 340 QYKWLEEDLANVEREVTPWLVATWHAPWYSTYKAHYREAECMRVAMEDLLYK-YGVDVVFNGHVHAYER 407 (552)
Q Consensus 340 Q~~WL~~~L~~~~r~~~pwiIV~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~-y~VdlvlsGH~H~yeR 407 (552)
..++..++|++ .++..+|+++|-.......... ..+.....|.++ .+||++|+||.|....
T Consensus 171 ~~~~~v~~lr~---~~~D~IIvl~H~g~~~~~~~~~----~~~~~~~~la~~~~~vD~IlgGHsH~~~~ 232 (277)
T cd07410 171 TAKKYVPKLRA---EGADVVVVLAHGGFERDLEESL----TGENAAYELAEEVPGIDAILTGHQHRRFP 232 (277)
T ss_pred HHHHHHHHHHH---cCCCEEEEEecCCcCCCccccc----CCccHHHHHHhcCCCCcEEEeCCCccccc
Confidence 34444455543 4567899999998764321000 111222344444 5899999999997543
No 57
>KOG3770 consensus Acid sphingomyelinase and PHM5 phosphate metabolism protein [Lipid transport and metabolism]
Probab=98.19 E-value=2.3e-05 Score=85.50 Aligned_cols=162 Identities=20% Similarity=0.284 Sum_probs=87.9
Q ss_pred HHHHHHHHC--CCCEEEEcCccccccccccCCCCCCcccccCCCCCCcccchHHHHHHHHhhhhhhccCCeEEecCCccc
Q 008823 225 STVSHMISN--RPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDYWGRYMQPVLSKVPIMVVEGNHEY 302 (552)
Q Consensus 225 ~~l~~l~~~--~pDfvl~~GDl~Yad~~~~~G~~~d~~~~~~~~~~~~e~y~~~wd~~~~~l~~l~~~iP~~~v~GNHE~ 302 (552)
+++++|.++ ++|||++.||++-.+.|. ...+.--.......+.|.+....+|++++.||||.
T Consensus 199 s~L~~ike~~~~iD~I~wTGD~~~H~~w~----------------~t~~~~l~~~~~l~~~~~e~FpdvpvypalGNhe~ 262 (577)
T KOG3770|consen 199 SALDHIKENHKDIDYIIWTGDNVAHDVWA----------------QTEEENLSMLSRLTSLLSEYFPDVPVYPALGNHEI 262 (577)
T ss_pred HHHHHHHhcCCCCCEEEEeCCCCcccchh----------------hhHHHHHHHHHHHHHHHHHhCCCCceeeecccCCC
Confidence 456777665 489999999999554220 01111111122334556667789999999999998
Q ss_pred ccccc-------ch-----hhhhhhccc--CCCCCCC-CCCCceeEEeeh----------------------------hH
Q 008823 303 EEQAE-------NR-----TFVAYTSRF--AFPSKES-GSLSKFYYSFNA----------------------------GD 339 (552)
Q Consensus 303 ~~~~~-------~~-----~f~~y~~rF--~~P~~~~-~~~~~~yYsfd~----------------------------G~ 339 (552)
..... .. .+..+...| .+|.... ....+-||.-.. ..
T Consensus 263 ~P~N~F~~~~~~~~~~~~wly~~~~~~W~~wlp~e~~~t~~kga~Y~~~~~~Glr~IslNt~~c~~~N~~L~~n~tdp~~ 342 (577)
T KOG3770|consen 263 HPVNLFAPGSVPKRHSQLWLYKHLAGAWSTWLPAEAKETFLKGAYYLVLVIDGLRLISLNTNYCSAPNFWLYANQTDPID 342 (577)
T ss_pred CcHhhcCCCCCcchhhhhHHHHHHHhhhhccCCHHHHhhhhcCcEEEEeecCCceEEEeccccccccceeeeecCCCchH
Confidence 64311 00 011111111 1232210 011122332211 08
Q ss_pred HHHHHHHHHhhcccCCCCEEEEEeCCcccccCcCcccchHHHHHHHHHHHHHcC--CcEEEEccccCceee
Q 008823 340 QYKWLEEDLANVEREVTPWLVATWHAPWYSTYKAHYREAECMRVAMEDLLYKYG--VDVVFNGHVHAYERS 408 (552)
Q Consensus 340 Q~~WL~~~L~~~~r~~~pwiIV~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~y~--VdlvlsGH~H~yeR~ 408 (552)
|++|+..+|..+..++.. |=+++|.|.-... . .+.....+-.++.++. |-..|.||.|.-+-.
T Consensus 343 ~lqWf~~~L~~ae~~Gek-Vhil~HIPpG~~~---c--~~~ws~~f~~iv~r~~~tI~gqf~GH~h~d~f~ 407 (577)
T KOG3770|consen 343 QLQWFVDQLQEAESAGEK-VHILGHIPPGDGV---C--LEGWSINFYRIVNRFRSTIAGQFYGHTHIDEFR 407 (577)
T ss_pred HhhHHHHHHHHHHhcCCE-EEEEEeeCCCCcc---h--hhhhhHHHHHHHHHHHHhhhhhccccCcceeEE
Confidence 999999999987654443 6678999874311 0 1111233444555553 456799999986644
No 58
>cd07406 MPP_CG11883_N Drosophila melanogaster CG11883 and related proteins, N-terminal metallophosphatase domain. CG11883 is an uncharacterized Drosophila melanogaster UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at th
Probab=98.18 E-value=1.2e-05 Score=81.10 Aligned_cols=68 Identities=16% Similarity=0.201 Sum_probs=39.9
Q ss_pred HHHHHHHHhhcccCCCCEEEEEeCCcccccCcCcccchHHHHHHHHHHHHH-cCCcEEEEccccCceeeeecccCccCCC
Q 008823 341 YKWLEEDLANVEREVTPWLVATWHAPWYSTYKAHYREAECMRVAMEDLLYK-YGVDVVFNGHVHAYERSNRVYNYTLDPC 419 (552)
Q Consensus 341 ~~WL~~~L~~~~r~~~pwiIV~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~-y~VdlvlsGH~H~yeR~~pv~n~~~~~~ 419 (552)
.+.+++.+++..+.++.-+|++.|-+.... + ++.++ .+||++|+||.|..+.. ..+
T Consensus 157 ~~~~~~~v~~~~~~~~D~iVvl~H~g~~~d-----------~----~la~~~~~iD~IlgGH~H~~~~~--------~~~ 213 (257)
T cd07406 157 VETARELVDELREQGADLIIALTHMRLPND-----------K----RLAREVPEIDLILGGHDHEYILV--------QVG 213 (257)
T ss_pred HHHHHHHHHHHHhCCCCEEEEEeccCchhh-----------H----HHHHhCCCCceEEecccceeEee--------eEC
Confidence 334444443333356788999999875321 1 22223 48999999999987622 123
Q ss_pred CCeEEEeCCCCc
Q 008823 420 GPVHITVGDGGN 431 (552)
Q Consensus 420 g~vyiv~G~gG~ 431 (552)
++..+-+|.-|.
T Consensus 214 ~t~vv~~g~~g~ 225 (257)
T cd07406 214 GTPIVKSGSDFR 225 (257)
T ss_pred CEEEEeCCcCcc
Confidence 555555555544
No 59
>COG0622 Predicted phosphoesterase [General function prediction only]
Probab=98.16 E-value=2.2e-05 Score=74.29 Aligned_cols=136 Identities=20% Similarity=0.202 Sum_probs=81.9
Q ss_pred eEEEEEeccCCCCCh-HHHHHHHHHCCCCEEEEcCccccccccccCCCCCCcccccCCCCCCcccchHHHHHHHHhhhhh
Q 008823 209 SRIAIVGDVGLTYNT-TSTVSHMISNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDYWGRYMQPV 287 (552)
Q Consensus 209 ~rfaviGD~g~~~~~-~~~l~~l~~~~pDfvl~~GDl~Yad~~~~~G~~~d~~~~~~~~~~~~e~y~~~wd~~~~~l~~l 287 (552)
.+|++++|+|..... ....+.....++|+|||+||.+... . .+.+...
T Consensus 2 m~ilviSDtH~~~~~~~~~~~~~~~~~~d~vih~GD~~~~~------~---------------------~~~l~~~---- 50 (172)
T COG0622 2 MKILVISDTHGPLRAIEKALKIFNLEKVDAVIHAGDSTSPF------T---------------------LDALEGG---- 50 (172)
T ss_pred cEEEEEeccCCChhhhhHHHHHhhhcCCCEEEECCCcCCcc------c---------------------hHHhhcc----
Confidence 589999999987532 2233334456999999999998521 1 0111110
Q ss_pred hccCCeEEecCCccccccccchhhhhhhcccCCCCCCCCCCCceeEEeehhHHHHHHHHHHhhcccCCCCEEEEEeCCcc
Q 008823 288 LSKVPIMVVEGNHEYEEQAENRTFVAYTSRFAFPSKESGSLSKFYYSFNAGDQYKWLEEDLANVEREVTPWLVATWHAPW 367 (552)
Q Consensus 288 ~~~iP~~~v~GNHE~~~~~~~~~f~~y~~rF~~P~~~~~~~~~~yYsfd~G~Q~~WL~~~L~~~~r~~~pwiIV~~H~P~ 367 (552)
-..++++|.||.|.+... -..|.. ..+ +. ..-+|++.|--.
T Consensus 51 -~~~~i~~V~GN~D~~~~~-----------~~~p~~----------------------~~~-~~----~g~ki~l~HGh~ 91 (172)
T COG0622 51 -LAAKLIAVRGNCDGEVDQ-----------EELPEE----------------------LVL-EV----GGVKIFLTHGHL 91 (172)
T ss_pred -cccceEEEEccCCCcccc-----------ccCChh----------------------HeE-EE----CCEEEEEECCCc
Confidence 246899999999985311 011110 001 11 113688888754
Q ss_pred cccCcCcccchHHHHHHHHHHHHHcCCcEEEEccccCceeeeecccCccCCCCCeEEEeCCCC
Q 008823 368 YSTYKAHYREAECMRVAMEDLLYKYGVDVVFNGHVHAYERSNRVYNYTLDPCGPVHITVGDGG 430 (552)
Q Consensus 368 y~s~~~~~~~~~~~r~~l~~ll~~y~VdlvlsGH~H~yeR~~pv~n~~~~~~g~vyiv~G~gG 430 (552)
|... .+ ...++.+-++.+.|+++.||+|...-.. -+|+++|.-|+..
T Consensus 92 ~~~~-~~-------~~~l~~la~~~~~Dvli~GHTH~p~~~~--------~~~i~~vNPGS~s 138 (172)
T COG0622 92 YFVK-TD-------LSLLEYLAKELGADVLIFGHTHKPVAEK--------VGGILLVNPGSVS 138 (172)
T ss_pred cccc-cC-------HHHHHHHHHhcCCCEEEECCCCcccEEE--------ECCEEEEcCCCcC
Confidence 4311 11 3456667778899999999999865543 2466666656543
No 60
>COG2908 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=98.12 E-value=4.2e-05 Score=75.08 Aligned_cols=41 Identities=32% Similarity=0.331 Sum_probs=33.5
Q ss_pred HHHHHHHHHHcCCcEEEEccccCceeeeecccCccCCCCCeEEEeCCCC
Q 008823 382 RVAMEDLLYKYGVDVVFNGHVHAYERSNRVYNYTLDPCGPVHITVGDGG 430 (552)
Q Consensus 382 r~~l~~ll~~y~VdlvlsGH~H~yeR~~pv~n~~~~~~g~vyiv~G~gG 430 (552)
.+...+.+++++||.+++||+|.-.-. +-.++.||+.|+..
T Consensus 176 ~~~v~~~~~~~~vd~vI~GH~Hr~ai~--------~i~~~~yi~lGdW~ 216 (237)
T COG2908 176 PAAVADEARRHGVDGVIHGHTHRPAIH--------NIPGITYINLGDWV 216 (237)
T ss_pred HHHHHHHHHHcCCCEEEecCcccHhhc--------cCCCceEEecCcch
Confidence 456667889999999999999986554 23469999999987
No 61
>cd07411 MPP_SoxB_N Thermus thermophilus SoxB and related proteins, N-terminal metallophosphatase domain. SoxB (sulfur oxidation protein B) is a periplasmic thiosulfohydrolase and an essential component of the sulfur oxidation pathway in archaea and bacteria. SoxB has a dinuclear manganese cluster and is thought to catalyze the release of sulfate from a protein-bound cysteine S-thiosulfonate. SoxB is expressed from the sox (sulfur oxidation) gene cluster, which encodes 15 other sox genes, and has two domains, an N-terminal metallophosphatase domain and a C-terminal 5'-nucleotidase domain. SoxB binds the SoxYZ complex and is thought to function as a sulfate-thiohydrolase. SoxB is closely related to the UshA, YchR, and CpdB proteins, all of which have the same two-domain architecture. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzy
Probab=98.05 E-value=3.7e-05 Score=77.89 Aligned_cols=72 Identities=21% Similarity=0.312 Sum_probs=39.9
Q ss_pred HHHHHHHHHhhcc-cCCCCEEEEEeCCcccccCcCcccchHHHHHHHHHHHHH-cCCcEEEEccccCceeeeecccCccC
Q 008823 340 QYKWLEEDLANVE-REVTPWLVATWHAPWYSTYKAHYREAECMRVAMEDLLYK-YGVDVVFNGHVHAYERSNRVYNYTLD 417 (552)
Q Consensus 340 Q~~WL~~~L~~~~-r~~~pwiIV~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~-y~VdlvlsGH~H~yeR~~pv~n~~~~ 417 (552)
..+.+++.+++.. ..+...+|++.|-+.... + .+.++ .+||++|+||.|..... |+ ..
T Consensus 167 ~~~~~~~~~~~~~~~~~~D~iI~l~H~g~~~~-----------~----~la~~~~~iDlilgGH~H~~~~~-~~----~~ 226 (264)
T cd07411 167 REEELQEVVVKLRREEGVDVVVLLSHNGLPVD-----------V----ELAERVPGIDVILSGHTHERTPK-PI----IA 226 (264)
T ss_pred HHHHHHHHHHHHHHhCCCCEEEEEecCCchhh-----------H----HHHhcCCCCcEEEeCcccccccC-cc----cc
Confidence 3444554433322 245678999999876321 1 12222 57999999999975322 10 01
Q ss_pred CCCCeEEEeCCCCc
Q 008823 418 PCGPVHITVGDGGN 431 (552)
Q Consensus 418 ~~g~vyiv~G~gG~ 431 (552)
-++++.+-+|.-|.
T Consensus 227 ~~~t~v~~~g~~~~ 240 (264)
T cd07411 227 GGGTLVVEAGSHGK 240 (264)
T ss_pred cCCEEEEEcCcccc
Confidence 24555555555444
No 62
>cd07408 MPP_SA0022_N Staphylococcus aureus SA0022 and related proteins, N-terminal metallophosphatase domain. SA0022 is an uncharacterized Staphylococcus aureus UshA-like protein with two putative domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. SA0022 also contains a putative C-terminal cell wall anchor domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet
Probab=97.95 E-value=6.4e-05 Score=75.86 Aligned_cols=46 Identities=22% Similarity=0.275 Sum_probs=29.5
Q ss_pred CCCCEEEEEeCCcccccCcCcccchHHHHHHHHHHHHH-cCCcEEEEccccCceee
Q 008823 354 EVTPWLVATWHAPWYSTYKAHYREAECMRVAMEDLLYK-YGVDVVFNGHVHAYERS 408 (552)
Q Consensus 354 ~~~pwiIV~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~-y~VdlvlsGH~H~yeR~ 408 (552)
.++.-+|++.|......... +. .. .+..+ .+||++|.||.|.....
T Consensus 170 ~~~D~iIvl~H~G~~~~~~~-~~-----~~---~la~~~~giDvIigGH~H~~~~~ 216 (257)
T cd07408 170 KGADVIVALGHLGVDRTSSP-WT-----ST---ELAANVTGIDLIIDGHSHTTIEI 216 (257)
T ss_pred CCCCEEEEEeCcCcCCCCCC-cc-----HH---HHHHhCCCceEEEeCCCcccccC
Confidence 45778999999887653211 11 11 22222 48999999999986543
No 63
>cd07412 MPP_YhcR_N Bacillus subtilis YhcR endonuclease and related proteins, N-terminal metallophosphatase domain. YhcR is a Bacillus subtilis sugar-nonspecific endonuclease. It cleaves endonucleolytically to yield nucleotide 3'-monophosphate products, similar to Staphylococcus aureus micrococcal nuclease. YhcR appears to be located in the cell wall, and is thought to be a substrate for a Bacillus subtilis sortase. YhcR is the major calcium-activated nuclease of B. subtilis. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated wi
Probab=97.92 E-value=0.0001 Score=75.67 Aligned_cols=84 Identities=17% Similarity=0.141 Sum_probs=45.0
Q ss_pred HHHHHHHHhhcccCCCCEEEEEeCCcccccCcCcccchHHHHHHHHHHHHH--cCCcEEEEccccCceeeeecccCccCC
Q 008823 341 YKWLEEDLANVEREVTPWLVATWHAPWYSTYKAHYREAECMRVAMEDLLYK--YGVDVVFNGHVHAYERSNRVYNYTLDP 418 (552)
Q Consensus 341 ~~WL~~~L~~~~r~~~pwiIV~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~--y~VdlvlsGH~H~yeR~~pv~n~~~~~ 418 (552)
.+-+++.+++.+..+...+|++.|-......... . .+.......+++.+ .+||++|+||.|..... +. ..-
T Consensus 177 ~e~~~~~v~~lr~~~~D~IIvL~H~G~~~~~~~~-~-~~~~~~~~~~l~~~~~~~iD~IlgGHsH~~~~~-~~----~~~ 249 (288)
T cd07412 177 VEAINAVAPELKAGGVDAIVVLAHEGGSTKGGDD-T-CSAASGPIADIVNRLDPDVDVVFAGHTHQAYNC-TV----PAG 249 (288)
T ss_pred HHHHHHHHHHHHHCCCCEEEEEeCCCCCCCCCCc-c-ccccChhHHHHHhhcCCCCCEEEeCccCccccc-cc----cCc
Confidence 3444444444433457789999998765321110 0 00001122334444 47999999999987543 10 012
Q ss_pred CCCeEEEeCCCCc
Q 008823 419 CGPVHITVGDGGN 431 (552)
Q Consensus 419 ~g~vyiv~G~gG~ 431 (552)
+++..+-+|+-|.
T Consensus 250 ~~~~v~q~g~~g~ 262 (288)
T cd07412 250 NPRLVTQAGSYGK 262 (288)
T ss_pred CCEEEEecChhhc
Confidence 4666666666555
No 64
>cd07424 MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase domain. PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm. The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine. This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all
Probab=97.91 E-value=2.2e-05 Score=76.53 Aligned_cols=37 Identities=24% Similarity=0.296 Sum_probs=24.6
Q ss_pred EEEEEeccCCCCChH-HHHHHHHH-CCCCEEEEcCcccc
Q 008823 210 RIAIVGDVGLTYNTT-STVSHMIS-NRPDLILLVGDVTY 246 (552)
Q Consensus 210 rfaviGD~g~~~~~~-~~l~~l~~-~~pDfvl~~GDl~Y 246 (552)
||+++||+|.....- +.++.+.. .++|.++++||+++
T Consensus 2 ri~~isDiHg~~~~l~~~l~~~~~~~~~d~~~~~GD~v~ 40 (207)
T cd07424 2 RDFVVGDIHGHYSLLQKALDAVGFDPARDRLISVGDLID 40 (207)
T ss_pred CEEEEECCCCCHHHHHHHHHHcCCCCCCCEEEEeCCccc
Confidence 689999999653221 12222221 25899999999995
No 65
>cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a d
Probab=97.86 E-value=4.3e-05 Score=72.06 Aligned_cols=33 Identities=18% Similarity=0.078 Sum_probs=23.5
Q ss_pred EEEEEeCCcccccCcCcccchHHHHHHHHHHHHHcCCcEEEEccccCceee
Q 008823 358 WLVATWHAPWYSTYKAHYREAECMRVAMEDLLYKYGVDVVFNGHVHAYERS 408 (552)
Q Consensus 358 wiIV~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~y~VdlvlsGH~H~yeR~ 408 (552)
..|++.|.|...... +.+.|++++||+|..+..
T Consensus 108 ~~i~l~H~~~~~~~~------------------~~~~d~vi~GHtH~~~~~ 140 (168)
T cd07390 108 RRVYLSHYPILEWNG------------------LDRGSWNLHGHIHSNSPD 140 (168)
T ss_pred EEEEEEeCCcccCCC------------------CCCCeEEEEeeeCCCCCC
Confidence 478999976542110 346799999999987765
No 66
>TIGR00619 sbcd exonuclease SbcD. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=97.85 E-value=4.9e-05 Score=76.61 Aligned_cols=73 Identities=21% Similarity=0.349 Sum_probs=48.1
Q ss_pred eEEEEEeccCCCCCh-------------HHHHHHHHHCCCCEEEEcCccccccccccCCCCCCcccccCCCCCCcccchH
Q 008823 209 SRIAIVGDVGLTYNT-------------TSTVSHMISNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQP 275 (552)
Q Consensus 209 ~rfaviGD~g~~~~~-------------~~~l~~l~~~~pDfvl~~GDl~Yad~~~~~G~~~d~~~~~~~~~~~~e~y~~ 275 (552)
+||++++|+|.+... ...++.+.+.++|+||++||++.. ... . ..
T Consensus 1 mkilh~SD~Hlg~~~~~~~~~~~~~~~l~~l~~~~~~~~~D~lli~GDi~d~------~~p--------------~--~~ 58 (253)
T TIGR00619 1 MRILHTSDWHLGKTLEGVSRLAEQKAFLDDLLEFAKAEQIDALLVAGDVFDT------ANP--------------P--AE 58 (253)
T ss_pred CEEEEEhhhcCCCccCCCChHHHHHHHHHHHHHHHHHcCCCEEEECCccCCC------CCC--------------C--HH
Confidence 589999999987431 123344456789999999999942 110 0 11
Q ss_pred HHHHHHHhhhhhhc-c-CCeEEecCCcccc
Q 008823 276 RWDYWGRYMQPVLS-K-VPIMVVEGNHEYE 303 (552)
Q Consensus 276 ~wd~~~~~l~~l~~-~-iP~~~v~GNHE~~ 303 (552)
....+.++++.+.. . +|+++++||||..
T Consensus 59 ~~~~~~~~l~~l~~~~~i~v~~i~GNHD~~ 88 (253)
T TIGR00619 59 AQELFNAFFRNLSDANPIPIVVISGNHDSA 88 (253)
T ss_pred HHHHHHHHHHHHHhcCCceEEEEccCCCCh
Confidence 22334455655542 3 8999999999985
No 67
>cd07409 MPP_CD73_N CD73 ecto-5'-nucleotidase and related proteins, N-terminal metallophosphatase domain. CD73 is a mammalian ecto-5'-nucleotidase expressed in endothelial cells and lymphocytes that catalyzes the conversion of 5'-AMP to adenosine in the final step of a pathway that generates adenosine from ATP. This pathway also includes a CD39 nucleoside triphosphate dephosphorylase that mediates the dephosphorylation of ATP to ADP and then to 5'-AMP. These enzymes all have an N-terminal metallophosphatase domain and a C-terminal 5'nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active si
Probab=97.82 E-value=0.00012 Score=74.80 Aligned_cols=53 Identities=21% Similarity=0.363 Sum_probs=34.9
Q ss_pred HHHHHHHHHHhhcccCCCCEEEEEeCCcccccCcCcccchHHHHHHHHHHHHH-cCCcEEEEccccCce
Q 008823 339 DQYKWLEEDLANVEREVTPWLVATWHAPWYSTYKAHYREAECMRVAMEDLLYK-YGVDVVFNGHVHAYE 406 (552)
Q Consensus 339 ~Q~~WL~~~L~~~~r~~~pwiIV~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~-y~VdlvlsGH~H~ye 406 (552)
+..+.+++.+++.+..++.-+|++.|-.... .+ .+.++ .+||++|+||.|...
T Consensus 166 d~~~~~~~~v~~lr~~~~D~II~l~H~G~~~-----------d~----~la~~~~giD~IiggH~H~~~ 219 (281)
T cd07409 166 DEIEAAQKEADKLKAQGVNKIIALSHSGYEV-----------DK----EIARKVPGVDVIVGGHSHTFL 219 (281)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEEeccCchh-----------HH----HHHHcCCCCcEEEeCCcCccc
Confidence 4455666666665445677899999987421 01 12222 489999999999864
No 68
>PRK04036 DNA polymerase II small subunit; Validated
Probab=97.81 E-value=0.00023 Score=78.69 Aligned_cols=87 Identities=15% Similarity=0.306 Sum_probs=53.0
Q ss_pred CCeEEEEEeccCCCCCh------HHHHHHHH---------HCCCCEEEEcCccccccccccCCCCCCcccccCCCCCCcc
Q 008823 207 YPSRIAIVGDVGLTYNT------TSTVSHMI---------SNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHE 271 (552)
Q Consensus 207 ~p~rfaviGD~g~~~~~------~~~l~~l~---------~~~pDfvl~~GDl~Yad~~~~~G~~~d~~~~~~~~~~~~e 271 (552)
.+.++++++|+|.+... ...++.+. ..+++.+|++||++...+... +... +....+
T Consensus 242 ~~~~i~~ISDlHlgs~~~~~~~l~~li~~L~g~~~~~~~~~~~~d~lVIaGDivd~~~~~p-~~~~--------~~~~~~ 312 (504)
T PRK04036 242 EKVYAVFISDVHVGSKEFLEDAFEKFIDWLNGEVGNEEEIASRVKYLIIAGDLVDGIGIYP-GQEE--------ELEIVD 312 (504)
T ss_pred CccEEEEEcccCCCCcchhHHHHHHHHHHHhCCCccchhhhhcCCEEEEeCcccccccCCc-cchh--------hccchh
Confidence 46899999999987542 12334444 457899999999995311000 0000 000011
Q ss_pred cchHHHHHHHHhhhhhhccCCeEEecCCcccc
Q 008823 272 TYQPRWDYWGRYMQPVLSKVPIMVVEGNHEYE 303 (552)
Q Consensus 272 ~y~~~wd~~~~~l~~l~~~iP~~~v~GNHE~~ 303 (552)
.+ .+.+.+.++++.+...+|+++++||||..
T Consensus 313 ~~-~~~~~l~~~L~~L~~~i~V~~ipGNHD~~ 343 (504)
T PRK04036 313 IY-EQYEAAAEYLKQIPEDIKIIISPGNHDAV 343 (504)
T ss_pred hH-HHHHHHHHHHHhhhcCCeEEEecCCCcch
Confidence 11 12345566777777889999999999975
No 69
>COG0420 SbcD DNA repair exonuclease [DNA replication, recombination, and repair]
Probab=97.79 E-value=5.3e-05 Score=81.13 Aligned_cols=75 Identities=20% Similarity=0.348 Sum_probs=50.6
Q ss_pred eEEEEEeccCCCC---Ch-----------HHHHHHHHHCCCCEEEEcCccccccccccCCCCCCcccccCCCCCCcccch
Q 008823 209 SRIAIVGDVGLTY---NT-----------TSTVSHMISNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQ 274 (552)
Q Consensus 209 ~rfaviGD~g~~~---~~-----------~~~l~~l~~~~pDfvl~~GDl~Yad~~~~~G~~~d~~~~~~~~~~~~e~y~ 274 (552)
+||++++|+|.++ +. ...++.+.+.++||||++||+...+ . |-.
T Consensus 1 mkilHtSD~HLG~~~~~~~~r~~d~~~~f~~~l~~a~~~~vD~vliAGDlFd~~------~------------Ps~---- 58 (390)
T COG0420 1 MKILHTSDWHLGSKQLNLPSRLEDQKKAFDELLEIAKEEKVDFVLIAGDLFDTN------N------------PSP---- 58 (390)
T ss_pred CeeEEecccccchhhccCccchHHHHHHHHHHHHHHHHccCCEEEEccccccCC------C------------CCH----
Confidence 5899999999982 21 1245556678999999999998532 1 100
Q ss_pred HHHHHHHHhhhhhh-ccCCeEEecCCcccccc
Q 008823 275 PRWDYWGRYMQPVL-SKVPIMVVEGNHEYEEQ 305 (552)
Q Consensus 275 ~~wd~~~~~l~~l~-~~iP~~~v~GNHE~~~~ 305 (552)
..-..+.+.++.+. .++|++++.||||....
T Consensus 59 ~a~~~~~~~l~~l~~~~Ipv~~I~GNHD~~~~ 90 (390)
T COG0420 59 RALKLFLEALRRLKDAGIPVVVIAGNHDSPSR 90 (390)
T ss_pred HHHHHHHHHHHHhccCCCcEEEecCCCCchhc
Confidence 11123445555553 58999999999998643
No 70
>cd07407 MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and related proteins, N-terminal metallophosphatase domain. YHR202W is an uncharacterized Saccharomyces cerevisiae UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at
Probab=97.75 E-value=0.00064 Score=69.65 Aligned_cols=73 Identities=15% Similarity=0.280 Sum_probs=42.7
Q ss_pred HHHHHHHhhcccCCCCEEEEEeCCcccccCcCcccchHHHHHHHHHHHHHc-CCc-EEEEccccCceeeeecccCccCCC
Q 008823 342 KWLEEDLANVEREVTPWLVATWHAPWYSTYKAHYREAECMRVAMEDLLYKY-GVD-VVFNGHVHAYERSNRVYNYTLDPC 419 (552)
Q Consensus 342 ~WL~~~L~~~~r~~~pwiIV~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~y-~Vd-lvlsGH~H~yeR~~pv~n~~~~~~ 419 (552)
+|+.+.|++ .+..-+|++.|....... . ..+..+.+.++. ++| ++|.||.|..... ++ .+
T Consensus 177 ~~v~~~l~~---~~~DvIIvlsH~G~~~d~-----~---~~~~~~~la~~~~~id~~Ii~GHsH~~~~~-~~------~~ 238 (282)
T cd07407 177 PWFQDAINN---EDVDLILVLGHMPVRDDA-----E---FKVLHDAIRKIFPDTPIQFLGGHSHVRDFT-QY------DS 238 (282)
T ss_pred HHHHHHHHh---cCCCEEEEEeCCCCCCCc-----c---HHHHHHHHHHhCCCCCEEEEeCCcccccce-ec------cC
Confidence 488777874 346779999998865421 1 111112233343 577 7999999975332 11 24
Q ss_pred CCeEEEeCCCCcc
Q 008823 420 GPVHITVGDGGNR 432 (552)
Q Consensus 420 g~vyiv~G~gG~~ 432 (552)
|+..+-.|.-|..
T Consensus 239 ~~~ivq~G~~g~~ 251 (282)
T cd07407 239 SSTGLESGRYLET 251 (282)
T ss_pred cEEEEeccchhhc
Confidence 5555556666654
No 71
>cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain. DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=97.74 E-value=0.00085 Score=67.64 Aligned_cols=171 Identities=18% Similarity=0.311 Sum_probs=90.2
Q ss_pred EEEEEeccCCCCChH---HHHHHHHH-CCCCEEEEcCccccccccccCCCCCCcccccCCCCCCcccchHHHHHHHHhhh
Q 008823 210 RIAIVGDVGLTYNTT---STVSHMIS-NRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDYWGRYMQ 285 (552)
Q Consensus 210 rfaviGD~g~~~~~~---~~l~~l~~-~~pDfvl~~GDl~Yad~~~~~G~~~d~~~~~~~~~~~~e~y~~~wd~~~~~l~ 285 (552)
||+++||.=...... ..+.++.+ .++||++..||++-. |.+. . + ...+.|.
T Consensus 1 ~ilfigdi~g~~G~~~~~~~l~~lk~~~~~D~vi~NgEn~~g------g~gl------------~---~----~~~~~L~ 55 (255)
T cd07382 1 KILFIGDIVGKPGRKAVKEHLPKLKKEYKIDFVIANGENAAG------GKGI------------T---P----KIAKELL 55 (255)
T ss_pred CEEEEEeCCCHHHHHHHHHHHHHHHHHCCCCEEEECCccccC------CCCC------------C---H----HHHHHHH
Confidence 588999985443332 23444443 478999999999842 2110 0 1 1223333
Q ss_pred hhhccCCeEEecCCccccccccchhhhhhhccc-------CCCCCCCCCCCceeEEeehh-------------------H
Q 008823 286 PVLSKVPIMVVEGNHEYEEQAENRTFVAYTSRF-------AFPSKESGSLSKFYYSFNAG-------------------D 339 (552)
Q Consensus 286 ~l~~~iP~~~v~GNHE~~~~~~~~~f~~y~~rF-------~~P~~~~~~~~~~yYsfd~G-------------------~ 339 (552)
.+ .+-+ ++.||||+... ....+.... ++|... ....|+-++.+ .
T Consensus 56 ~~--G~D~-iTlGNH~fD~g----el~~~l~~~~~~l~~aN~~~~~---pg~~~~i~~~~G~kIaVigl~g~~~~~~~~~ 125 (255)
T cd07382 56 SA--GVDV-ITMGNHTWDKK----EILDFIDEEPRLLRPANYPPGT---PGRGYGVVEVNGKKIAVINLMGRVFMPPLDN 125 (255)
T ss_pred hc--CCCE-EEecccccCcc----hHHHHHhcCcCceEeeecCCCC---CCCCeEEEEECCEEEEEEEEecccCCCcCCC
Confidence 32 3444 45599999643 122222211 222211 12224444322 2
Q ss_pred HHHHHHHHHhhcccCCCCEEEEEeCCcccccCcCcccchHHHHHHHHHHHHHcCCcEEEEccccCceeeeecccCccCCC
Q 008823 340 QYKWLEEDLANVEREVTPWLVATWHAPWYSTYKAHYREAECMRVAMEDLLYKYGVDVVFNGHVHAYERSNRVYNYTLDPC 419 (552)
Q Consensus 340 Q~~WL~~~L~~~~r~~~pwiIV~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~y~VdlvlsGH~H~yeR~~pv~n~~~~~~ 419 (552)
-++-+++.+++.+. +++.+||.+|--..+ + +.++.. ....+||+++.||+|...--.. +-|+
T Consensus 126 P~~~~~~~v~~lk~-~~D~IIV~~H~g~ts-------E----k~ala~-~ldg~VdvIvGtHTHv~t~d~~-----il~~ 187 (255)
T cd07382 126 PFRAADELLEELKE-EADIIFVDFHAEATS-------E----KIALGW-YLDGRVSAVVGTHTHVQTADER-----ILPG 187 (255)
T ss_pred HHHHHHHHHHHHhc-CCCEEEEEECCCCCH-------H----HHHHHH-hCCCCceEEEeCCCCccCCccE-----EeeC
Confidence 23445555555443 567899999984311 1 122221 2234699999999998533221 1367
Q ss_pred CCeEEEe-CCCCccC
Q 008823 420 GPVHITV-GDGGNRE 433 (552)
Q Consensus 420 g~vyiv~-G~gG~~e 433 (552)
|+.||+. |.-|...
T Consensus 188 gTa~itd~Gm~G~~~ 202 (255)
T cd07382 188 GTAYITDVGMTGPYD 202 (255)
T ss_pred CeEEEecCccccCCC
Confidence 8988874 6666643
No 72
>cd07425 MPP_Shelphs Shewanella-like phosphatases, metallophosphatase domain. This family includes bacterial, eukaryotic, and archeal proteins orthologous to the Shewanella cold-active protein-tyrosine phosphatase, CAPTPase. CAPTPase is an uncharacterized protein that belongs to the Shelph (Shewanella-like phosphatase) family of PPP (phosphoprotein phosphatases). The PPP family is one of two known protein phosphatase families specific for serine and threonine. In addition to Shelps, the PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metal
Probab=97.73 E-value=5.8e-05 Score=73.85 Aligned_cols=24 Identities=17% Similarity=0.314 Sum_probs=20.6
Q ss_pred HHHHHHHHcCCcEEEEccccCcee
Q 008823 384 AMEDLLYKYGVDVVFNGHVHAYER 407 (552)
Q Consensus 384 ~l~~ll~~y~VdlvlsGH~H~yeR 407 (552)
.++.+|..++.++++.||+|.-..
T Consensus 158 ~~~~~l~~~~~~~iv~GHTh~~~~ 181 (208)
T cd07425 158 HLDKVLERLGAKRMVVGHTPQEGG 181 (208)
T ss_pred HHHHHHHHcCCCeEEEcCeeeecC
Confidence 577889999999999999997544
No 73
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=97.72 E-value=0.00038 Score=84.53 Aligned_cols=40 Identities=20% Similarity=0.316 Sum_probs=29.1
Q ss_pred CCeEEEEEeccCCCCCh----HHHHHHHHHCCCCEEEE-cCcccc
Q 008823 207 YPSRIAIVGDVGLTYNT----TSTVSHMISNRPDLILL-VGDVTY 246 (552)
Q Consensus 207 ~p~rfaviGD~g~~~~~----~~~l~~l~~~~pDfvl~-~GDl~Y 246 (552)
..++|++++|+|..... ...++++.+.+++.+++ +||++.
T Consensus 659 ~~l~Il~~nD~Hg~l~g~~r~~~~i~~~r~~~~~~l~ld~GD~~~ 703 (1163)
T PRK09419 659 WELTILHTNDFHGHLDGAAKRVTKIKEVKEENPNTILVDAGDVYQ 703 (1163)
T ss_pred eEEEEEEEeecccCCCCHHHHHHHHHHHHhhCCCeEEEecCCCCC
Confidence 46999999999965422 23456666678887765 999984
No 74
>cd00844 MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-terminal metallophosphatase domain. Dbr1 is an RNA lariat debranching enzyme that hydrolyzes 2'-5' phosphodiester bonds at the branch points of excised intron lariats. This alignment model represents the N-terminal metallophosphatase domain of Dbr1. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal s
Probab=97.72 E-value=0.00037 Score=70.58 Aligned_cols=50 Identities=20% Similarity=0.141 Sum_probs=35.1
Q ss_pred EEEEeCCcccccCcCcccchH-----------------HHHHHHHHHHHHcCCcEEEEccccC-ceeeee
Q 008823 359 LVATWHAPWYSTYKAHYREAE-----------------CMRVAMEDLLYKYGVDVVFNGHVHA-YERSNR 410 (552)
Q Consensus 359 iIV~~H~P~y~s~~~~~~~~~-----------------~~r~~l~~ll~~y~VdlvlsGH~H~-yeR~~p 410 (552)
-|++.|.|+..-... .+.. .-...+.+|+.+.+....|+||.|. |++..|
T Consensus 167 DIlLSHdWP~gI~~~--~~~~~l~~~~~~~~~~~~~~~~Gs~~~~~ll~~lkPryhf~gH~H~~f~~~~~ 234 (262)
T cd00844 167 DIFLSHDWPRGIYKH--GDKKQLLRKKPFFRQDIESGTLGSPAAEELLKHLKPRYWFSAHLHVKFAALVP 234 (262)
T ss_pred cEEEeCCCCcchhhc--cchHHhhhcCccchhcccccCCCCHHHHHHHHHhCCCEEEEecCCcccceecC
Confidence 499999998764221 1100 0124677899999999999999998 777654
No 75
>PRK10966 exonuclease subunit SbcD; Provisional
Probab=97.69 E-value=0.00012 Score=78.86 Aligned_cols=74 Identities=20% Similarity=0.331 Sum_probs=47.2
Q ss_pred eEEEEEeccCCCCCh-------------HHHHHHHHHCCCCEEEEcCccccccccccCCCCCCcccccCCCCCCcccchH
Q 008823 209 SRIAIVGDVGLTYNT-------------TSTVSHMISNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQP 275 (552)
Q Consensus 209 ~rfaviGD~g~~~~~-------------~~~l~~l~~~~pDfvl~~GDl~Yad~~~~~G~~~d~~~~~~~~~~~~e~y~~ 275 (552)
+||++++|+|.+... ...++.+.+.+||+||++||++.. +.. .. .
T Consensus 1 mkilh~SDlHlG~~~~~~~~~~~~~~~l~~l~~~i~~~~~D~viIaGDifD~------~~p--------------~~--~ 58 (407)
T PRK10966 1 MRILHTSDWHLGQNFYSKSRAAEHQAFLDWLLEQVQEHQVDAIIVAGDIFDT------GSP--------------PS--Y 58 (407)
T ss_pred CEEEEEcccCCCCcccCcccHHHHHHHHHHHHHHHHhcCCCEEEECCccccC------CCC--------------cH--H
Confidence 589999999987321 123344456799999999999842 110 00 1
Q ss_pred HHHHHHHhhhhhh-ccCCeEEecCCccccc
Q 008823 276 RWDYWGRYMQPVL-SKVPIMVVEGNHEYEE 304 (552)
Q Consensus 276 ~wd~~~~~l~~l~-~~iP~~~v~GNHE~~~ 304 (552)
....+.+++..+. ..+|+++++||||...
T Consensus 59 a~~~~~~~l~~L~~~~~~v~~I~GNHD~~~ 88 (407)
T PRK10966 59 ARELYNRFVVNLQQTGCQLVVLAGNHDSVA 88 (407)
T ss_pred HHHHHHHHHHHHHhcCCcEEEEcCCCCChh
Confidence 1122334444443 3689999999999753
No 76
>PRK11439 pphA serine/threonine protein phosphatase 1; Provisional
Probab=97.68 E-value=6.8e-05 Score=73.87 Aligned_cols=37 Identities=27% Similarity=0.425 Sum_probs=26.5
Q ss_pred EEEEEeccCCCCCh-HHHHHHHHHC-CCCEEEEcCcccc
Q 008823 210 RIAIVGDVGLTYNT-TSTVSHMISN-RPDLILLVGDVTY 246 (552)
Q Consensus 210 rfaviGD~g~~~~~-~~~l~~l~~~-~pDfvl~~GDl~Y 246 (552)
|++++||+|..... .+.++++... +.|-++++||++.
T Consensus 18 ri~vigDIHG~~~~L~~lL~~i~~~~~~D~li~lGDlvD 56 (218)
T PRK11439 18 HIWLVGDIHGCFEQLMRKLRHCRFDPWRDLLISVGDLID 56 (218)
T ss_pred eEEEEEcccCCHHHHHHHHHhcCCCcccCEEEEcCcccC
Confidence 89999999986443 2344444322 5789999999994
No 77
>PRK09968 serine/threonine-specific protein phosphatase 2; Provisional
Probab=97.66 E-value=5.2e-05 Score=74.70 Aligned_cols=37 Identities=30% Similarity=0.440 Sum_probs=25.9
Q ss_pred EEEEEeccCCCCChH-HHHHHHH-HCCCCEEEEcCcccc
Q 008823 210 RIAIVGDVGLTYNTT-STVSHMI-SNRPDLILLVGDVTY 246 (552)
Q Consensus 210 rfaviGD~g~~~~~~-~~l~~l~-~~~pDfvl~~GDl~Y 246 (552)
|++++||+|.....- +.++.+. ..+.|.++++||++.
T Consensus 16 ri~visDiHg~~~~l~~~l~~~~~~~~~d~l~~lGD~vd 54 (218)
T PRK09968 16 HIWVVGDIHGEYQLLQSRLHQLSFCPETDLLISVGDNID 54 (218)
T ss_pred eEEEEEeccCCHHHHHHHHHhcCCCCCCCEEEECCCCcC
Confidence 899999999764322 2233332 236799999999995
No 78
>PHA02546 47 endonuclease subunit; Provisional
Probab=97.62 E-value=0.00016 Score=76.07 Aligned_cols=74 Identities=15% Similarity=0.220 Sum_probs=46.0
Q ss_pred eEEEEEeccCCCCCh---------HH----HHHHHHHCCCCEEEEcCccccccccccCCCCCCcccccCCCCCCcccchH
Q 008823 209 SRIAIVGDVGLTYNT---------TS----TVSHMISNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQP 275 (552)
Q Consensus 209 ~rfaviGD~g~~~~~---------~~----~l~~l~~~~pDfvl~~GDl~Yad~~~~~G~~~d~~~~~~~~~~~~e~y~~ 275 (552)
+||++++|+|.+... .. .++.+.++++|+||++||+.... .. +. ..
T Consensus 1 MKilhiSD~HLG~~~~~~~~~~~~~~~l~~ii~~a~~~~vD~VliaGDlfD~~------~~-----------~~----~~ 59 (340)
T PHA02546 1 MKILLIGDQHLGVRKDDPWFQNYQLKFIKQAIEYSKAHGITTWIQLGDTFDVR------KA-----------IT----QN 59 (340)
T ss_pred CeEEEEeeecCCCcCCChhhHHHHHHHHHHHHHHHHHcCCCEEEECCcccCCC------CC-----------CC----HH
Confidence 589999999987432 12 33344567999999999998421 00 00 11
Q ss_pred HHHHHHH-hhhhhh-ccCCeEEecCCcccc
Q 008823 276 RWDYWGR-YMQPVL-SKVPIMVVEGNHEYE 303 (552)
Q Consensus 276 ~wd~~~~-~l~~l~-~~iP~~~v~GNHE~~ 303 (552)
......+ +++.+. ..+|+++++||||..
T Consensus 60 ~~~~~~~~l~~~L~~~gi~v~~I~GNHD~~ 89 (340)
T PHA02546 60 TMNFVREKIFDLLKEAGITLHVLVGNHDMY 89 (340)
T ss_pred HHHHHHHHHHHHHHHCCCeEEEEccCCCcc
Confidence 1111222 233332 479999999999975
No 79
>cd07405 MPP_UshA_N Escherichia coli UshA and related proteins, N-terminal metallophosphatase domain. UshA is a bacterial periplasmic enzyme with UDP-sugar hydrolase and dinucleoside-polyphosphate hydrolase activities associated with its N-terminal metallophosphatase domain, and 5'-nucleotidase activity associated with its C-terminal domain. UshA has been studied in Escherichia coli where it is expressed from the ushA gene as an immature precursor and proteolytically cleaved to form a mature product upon export to the periplasm. UshA hydrolyzes many different nucleotides and nucleotide derivitives and has been shown to degrade external UDP-glucose to uridine, glucose 1-phosphate and phosphate for utilization by the cell. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs
Probab=97.50 E-value=0.00075 Score=69.23 Aligned_cols=52 Identities=21% Similarity=0.195 Sum_probs=29.8
Q ss_pred CCCCEEEEEeCCcccccCcCcccchHHHHHHHHHHHHHcCCcEEEEccccCcee
Q 008823 354 EVTPWLVATWHAPWYSTYKAHYREAECMRVAMEDLLYKYGVDVVFNGHVHAYER 407 (552)
Q Consensus 354 ~~~pwiIV~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~y~VdlvlsGH~H~yeR 407 (552)
.++.-+|++.|-......... ........+.+.+...+||++|.||.|....
T Consensus 172 ~~~D~VI~lsH~G~~~~~~~~--~~~~~~~~lA~~~~~~giD~IigGHsH~~~~ 223 (285)
T cd07405 172 EKPDIVIAATHMGHYDNGEHG--SNAPGDVEMARALPAGGLDLIVGGHSQDPVC 223 (285)
T ss_pred cCCCEEEEEecccccCCcccc--ccCchHHHHHHhcCCCCCCEEEeCCCCcccc
Confidence 356789999999875432100 0000011222222235899999999998653
No 80
>TIGR00282 metallophosphoesterase, MG_246/BB_0505 family. A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase.
Probab=97.49 E-value=0.0055 Score=62.08 Aligned_cols=74 Identities=22% Similarity=0.187 Sum_probs=48.4
Q ss_pred HHHHHHhhcccCCCCEEEEEeCCcccccCcCcccchHHHHHHHHHHHHHcCCcEEEEccccCceeeeecccCccCCCCCe
Q 008823 343 WLEEDLANVEREVTPWLVATWHAPWYSTYKAHYREAECMRVAMEDLLYKYGVDVVFNGHVHAYERSNRVYNYTLDPCGPV 422 (552)
Q Consensus 343 WL~~~L~~~~r~~~pwiIV~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~y~VdlvlsGH~H~yeR~~pv~n~~~~~~g~v 422 (552)
-+++.+++.+. +++.+||.+|.-.-+ .+.....+.+.+||+|+.-|+|...--.++ =|.|+.
T Consensus 132 ~~d~~i~~lk~-~~d~IIVd~Haeats------------EK~a~~~~ldg~vsaVvGtHtHV~TaD~~i-----l~~gta 193 (266)
T TIGR00282 132 VLKELINMLKK-DCDLIFVDFHAETTS------------EKNAFGMAFDGYVTAVVGTHTHVPTADLRI-----LPKGTA 193 (266)
T ss_pred HHHHHHHhhhc-CCCEEEEEeCCCCHH------------HHHHHHHHhCCCccEEEeCCCCCCCCccee-----CCCCCE
Confidence 34444444432 367899999965311 133456677889999999999975443322 368999
Q ss_pred EEEe-CCCCccCC
Q 008823 423 HITV-GDGGNREK 434 (552)
Q Consensus 423 yiv~-G~gG~~e~ 434 (552)
||+- |.-|...+
T Consensus 194 yitD~Gm~G~~~s 206 (266)
T TIGR00282 194 YITDVGMTGPFGS 206 (266)
T ss_pred EEecCCcccCccc
Confidence 9985 77776543
No 81
>COG4186 Predicted phosphoesterase or phosphohydrolase [General function prediction only]
Probab=97.41 E-value=0.0019 Score=59.28 Aligned_cols=38 Identities=21% Similarity=0.206 Sum_probs=25.4
Q ss_pred EEEEeCCcccccCcCcccchHHHHHHHHHHHHHcCCcEEEEccccC
Q 008823 359 LVATWHAPWYSTYKAHYREAECMRVAMEDLLYKYGVDVVFNGHVHA 404 (552)
Q Consensus 359 iIV~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~y~VdlvlsGH~H~ 404 (552)
.|+++|.|.-..... + | .......+.++++.+.||.|.
T Consensus 110 ~~~LsHyP~~~~~~~--~----~--~~r~~y~~~~~~llIHGH~H~ 147 (186)
T COG4186 110 DVYLSHYPRPGQDHP--G----M--ESRFDYLRLRVPLLIHGHLHS 147 (186)
T ss_pred EEEEEeCCCCCCCCc--c----h--hhhHHHHhccCCeEEeccccc
Confidence 699999997553211 1 1 122233456899999999999
No 82
>COG0737 UshA 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [Nucleotide transport and metabolism]
Probab=97.31 E-value=0.0022 Score=71.31 Aligned_cols=61 Identities=15% Similarity=0.145 Sum_probs=36.3
Q ss_pred HHHHHHHHHHhhcccCCCCEEEEEeCCcccccCcCcccchHHHHHHHHHHHHHcCCcEEEEccccCc
Q 008823 339 DQYKWLEEDLANVEREVTPWLVATWHAPWYSTYKAHYREAECMRVAMEDLLYKYGVDVVFNGHVHAY 405 (552)
Q Consensus 339 ~Q~~WL~~~L~~~~r~~~pwiIV~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~y~VdlvlsGH~H~y 405 (552)
...+++++.+.+.+.+...-+|++.|-+............ .... +.. .++|+++.||.|.+
T Consensus 187 d~~e~~~~~i~elk~~~vD~iI~LsH~G~~~d~~~~~~~~-~~~~----~~~-~~iD~i~~GH~H~~ 247 (517)
T COG0737 187 DPIEAAKKYIPELKGEGVDVIIALSHLGIEDDLELASEVP-GDVD----VAV-PGIDLIIGGHSHTV 247 (517)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEEeccCcCcccccccccc-cccc----ccc-cCcceEeccCCccc
Confidence 5667777776666544467799999998765422110000 0000 000 44999999999963
No 83
>cd07380 MPP_CWF19_N Schizosaccharomyces pombe CWF19 and related proteins, N-terminal metallophosphatase domain. CWF19 cell cycle control protein (also known as CWF19-like 1 (CWF19L1) in Homo sapiens), N-terminal metallophosphatase domain. CWF19 contains C-terminal domains similar to that found in the CwfJ cell cycle control protein. The metallophosphatase domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site
Probab=97.22 E-value=0.00087 Score=62.15 Aligned_cols=114 Identities=18% Similarity=0.126 Sum_probs=69.8
Q ss_pred EEEeccCCCCChHHHHHHHH-----HCCCCEEEEcCccccccccccCCCCCCcccccCCCCCCcccchHHHHHHHHhhh-
Q 008823 212 AIVGDVGLTYNTTSTVSHMI-----SNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDYWGRYMQ- 285 (552)
Q Consensus 212 aviGD~g~~~~~~~~l~~l~-----~~~pDfvl~~GDl~Yad~~~~~G~~~d~~~~~~~~~~~~e~y~~~wd~~~~~l~- 285 (552)
+|+||.+.. ..++++++. +...|++|++||+.-.+ . ..+.|..+++
T Consensus 1 LV~G~~~G~--l~~~~~kv~~~~~k~gpFd~~ic~Gdff~~~------~--------------------~~~~~~~y~~g 52 (150)
T cd07380 1 LVCGDVNGR--LKALFEKVNTINKKKGPFDALLCVGDFFGDD------E--------------------DDEELEAYKDG 52 (150)
T ss_pred CeeecCCcc--HHHHHHHHHHHhcccCCeeEEEEecCccCCc------c--------------------chhhHHHHhcC
Confidence 368888764 344444443 23689999999998321 0 0023444443
Q ss_pred hhhccCCeEEecCCccccccccchhhhhhhcccCCCCCCCCCCCceeEEeehhHHHHHHHHHHhhcccCCCCEEEEEeCC
Q 008823 286 PVLSKVPIMVVEGNHEYEEQAENRTFVAYTSRFAFPSKESGSLSKFYYSFNAGDQYKWLEEDLANVEREVTPWLVATWHA 365 (552)
Q Consensus 286 ~l~~~iP~~~v~GNHE~~~~~~~~~f~~y~~rF~~P~~~~~~~~~~yYsfd~G~Q~~WL~~~L~~~~r~~~pwiIV~~H~ 365 (552)
.....+|.+++-|||| +.-|++.|.
T Consensus 53 ~~~~pipTyf~ggn~~-------------------------------------------------------~~DILlTh~ 77 (150)
T cd07380 53 SKKVPIPTYFLGGNNP-------------------------------------------------------GVDILLTSE 77 (150)
T ss_pred CccCCCCEEEECCCCC-------------------------------------------------------CCCEEECCC
Confidence 3346789999999997 013677777
Q ss_pred cccccCc-Ccc----cchHHHHHHHHHHHHHcCCcEEEEcccc-Cceee
Q 008823 366 PWYSTYK-AHY----REAECMRVAMEDLLYKYGVDVVFNGHVH-AYERS 408 (552)
Q Consensus 366 P~y~s~~-~~~----~~~~~~r~~l~~ll~~y~VdlvlsGH~H-~yeR~ 408 (552)
|++.... ... .....-...+.+++++.+....|+||.| .|||-
T Consensus 78 wP~gi~~~~~~~~~~~~~~~GS~~i~~l~~~lkPrYhf~gh~~~fyer~ 126 (150)
T cd07380 78 WPKGISKLSKVPFEETLLICGSDLIAELAKKLKPRYHFAGLEGVFYERE 126 (150)
T ss_pred CchhhhhhCCCcccccccCCCCHHHHHHHHHcCCCeEeecCCCceEeec
Confidence 7765321 000 0000113466678888999999999999 56664
No 84
>PRK09558 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor; Reviewed
Probab=97.21 E-value=0.0031 Score=70.69 Aligned_cols=48 Identities=19% Similarity=0.245 Sum_probs=28.6
Q ss_pred CCCCEEEEEeCCcccccCcCcccchHHHHHHHHHHHHHc---CCcEEEEccccCce
Q 008823 354 EVTPWLVATWHAPWYSTYKAHYREAECMRVAMEDLLYKY---GVDVVFNGHVHAYE 406 (552)
Q Consensus 354 ~~~pwiIV~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~y---~VdlvlsGH~H~ye 406 (552)
.+..-+|++.|.......... .... .-..+.++. +||++|.||.|..-
T Consensus 208 ~~~D~IV~LsH~G~~~~~~~~-~~~~----~d~~la~~~~~~~IDvIlgGHsH~~~ 258 (551)
T PRK09558 208 EKPDVIIALTHMGHYDDGEHG-SNAP----GDVEMARSLPAGGLDMIVGGHSQDPV 258 (551)
T ss_pred cCCCEEEEEeccccccCCccC-CCCc----cHHHHHHhCCccCceEEEeCCCCccc
Confidence 357789999998875421110 0000 002333333 79999999999753
No 85
>TIGR01530 nadN NAD pyrophosphatase/5'-nucleotidase NadN. This model describes NadN of Haemophilus influenzae and a small number of close homologs in pathogenic, Gram-negative bacteria. NadN is a periplasmic enzyme that cleaves NAD (nicotinamide adenine dinucleotide) to NMN (nicotinamide mononucleotide) and AMP. The NMN must be converted by a 5'-nucleotidase to nicotinamide riboside for import. NadN belongs a large family of 5'-nucleotidases and has NMN 5'-nucleotidase activity for NMN, AMP, etc.
Probab=97.21 E-value=0.0035 Score=70.23 Aligned_cols=38 Identities=18% Similarity=0.219 Sum_probs=25.5
Q ss_pred CCCCEEEEEeCCcccccCcCcccchHHHHHHHHHHHHH-cCCcEEEEccccCce
Q 008823 354 EVTPWLVATWHAPWYSTYKAHYREAECMRVAMEDLLYK-YGVDVVFNGHVHAYE 406 (552)
Q Consensus 354 ~~~pwiIV~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~-y~VdlvlsGH~H~ye 406 (552)
.+..-+|++.|..... . ..+.++ -+||++|.||.|.+-
T Consensus 181 ~g~D~II~lsH~g~~~--------d-------~~la~~~~~iD~IigGHsH~~~ 219 (550)
T TIGR01530 181 QGINKIILLSHAGFEK--------N-------CEIAQKINDIDVIVSGDSHYLL 219 (550)
T ss_pred CCCCEEEEEecCCcHH--------H-------HHHHhcCCCCCEEEeCCCCccc
Confidence 4567799999975421 0 123333 379999999999853
No 86
>cd07391 MPP_PF1019 Pyrococcus furiosus PF1019 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to PF1019, an uncharacterized Pyrococcus furiosus protein. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for pro
Probab=97.16 E-value=0.0008 Score=63.64 Aligned_cols=70 Identities=17% Similarity=0.405 Sum_probs=42.2
Q ss_pred EEEeccCCCCCh--------------HHHHHH----HHHCCCCEEEEcCccccccccccCCCCCCcccccCCCCCCcccc
Q 008823 212 AIVGDVGLTYNT--------------TSTVSH----MISNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETY 273 (552)
Q Consensus 212 aviGD~g~~~~~--------------~~~l~~----l~~~~pDfvl~~GDl~Yad~~~~~G~~~d~~~~~~~~~~~~e~y 273 (552)
++++|+|.+... ..++++ +.+.+||.|+++||+++... +. .
T Consensus 1 l~isDlHlG~~~~~~~~g~~~p~~~~~~~~~~l~~~~~~~~~d~lii~GDl~~~~~----~~----------------~- 59 (172)
T cd07391 1 LVVADLHLGKEEELRRRGILLPRGQTEDTLERLDRLIEEYGPERLIILGDLKHSFG----GL----------------S- 59 (172)
T ss_pred CEeEeeccchHHHHHhcCCcCCcccHHHHHHHHHHHHHhcCCCEEEEeCccccccc----cc----------------C-
Confidence 367888877422 123333 34569999999999995310 10 0
Q ss_pred hHHHHHHHHhhhhhhccCCeEEecCCcccc
Q 008823 274 QPRWDYWGRYMQPVLSKVPIMVVEGNHEYE 303 (552)
Q Consensus 274 ~~~wd~~~~~l~~l~~~iP~~~v~GNHE~~ 303 (552)
...+.... .+......+|++.++||||..
T Consensus 60 ~~~~~~~~-~~~~~~~~~~v~~i~GNHD~~ 88 (172)
T cd07391 60 RQEFEEVA-FLRLLAKDVDVILIRGNHDGG 88 (172)
T ss_pred HHHHHHHH-HHHhccCCCeEEEEcccCccc
Confidence 11222211 333445678999999999984
No 87
>cd08162 MPP_PhoA_N Synechococcus sp. strain PCC 7942 PhoA and related proteins, N-terminal metallophosphatase domain. Synechococcus sp. strain PCC 7942 PhoA is a large atypical alkaline phosphatase. It is known to be transported across the inner cytoplasmic membrane and into the periplasmic space. In vivo inactivation of the gene encoding PhoA leads to a loss of extracellular, phosphate-regulated phosphatase activity, but does not appear to affect the cells capacity for phosphate uptake. PhoA may play a role in scavenging phosphate during growth of Synechococcus sp. strain PCC 7942 in its natural environment. PhoA belongs to a domain family which includes the bacterial enzyme UshA and several other related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly relat
Probab=96.87 E-value=0.0084 Score=62.41 Aligned_cols=39 Identities=21% Similarity=0.166 Sum_probs=25.9
Q ss_pred CCCCEEEEEeCCcccccCcCcccchHHHHHHHHHHHHHc-CCcEEEEccccCce
Q 008823 354 EVTPWLVATWHAPWYSTYKAHYREAECMRVAMEDLLYKY-GVDVVFNGHVHAYE 406 (552)
Q Consensus 354 ~~~pwiIV~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~y-~VdlvlsGH~H~ye 406 (552)
.+..-+|++.|---+. .. ..|.++. +||++|.||.|.+-
T Consensus 206 ~gvD~II~LsH~g~~~-------~d-------~~lA~~v~gIDvIigGHsH~~l 245 (313)
T cd08162 206 QGINKIILLSHLQQIS-------IE-------QALAALLSGVDVIIAGGSNTLL 245 (313)
T ss_pred CCCCEEEEEecccccc-------hH-------HHHHhcCCCCCEEEeCCCCccC
Confidence 4567799999973211 11 1244443 79999999999863
No 88
>PRK11907 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=96.76 E-value=0.021 Score=66.31 Aligned_cols=57 Identities=18% Similarity=0.114 Sum_probs=32.2
Q ss_pred HHHHHhhcccCCCCEEEEEeCCcccccCcCcccchHHHHHHHHHHHHHcCCcEEEEccccCc
Q 008823 344 LEEDLANVEREVTPWLVATWHAPWYSTYKAHYREAECMRVAMEDLLYKYGVDVVFNGHVHAY 405 (552)
Q Consensus 344 L~~~L~~~~r~~~pwiIV~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~y~VdlvlsGH~H~y 405 (552)
+++...+.+..++.-||++.|.-+.........+ . .-..|..--+||++|.||.|..
T Consensus 298 a~~~v~~Lr~~GaDvIIaLsH~G~~~d~~~~~~E--n---~~~~LA~v~GIDaIvgGHsH~~ 354 (814)
T PRK11907 298 VRDIIPTMRAAGADIVLVLSHSGIGDDQYEVGEE--N---VGYQIASLSGVDAVVTGHSHAE 354 (814)
T ss_pred HHHHHHHHHhcCCCEEEEEeCCCccccccccccc--c---hhhHHhcCCCCCEEEECCCCCc
Confidence 3333333333467889999998865421111111 1 1112323358999999999985
No 89
>PHA02239 putative protein phosphatase
Probab=96.75 E-value=0.0032 Score=62.79 Aligned_cols=70 Identities=19% Similarity=0.306 Sum_probs=42.1
Q ss_pred eEEEEEeccCCCCCh-HHHHHHHHHC--CCCEEEEcCccccccccccCCCCCCcccccCCCCCCcccchHHHHHHHHhhh
Q 008823 209 SRIAIVGDVGLTYNT-TSTVSHMISN--RPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDYWGRYMQ 285 (552)
Q Consensus 209 ~rfaviGD~g~~~~~-~~~l~~l~~~--~pDfvl~~GDl~Yad~~~~~G~~~d~~~~~~~~~~~~e~y~~~wd~~~~~l~ 285 (552)
+|++++||+|..... .+.++.+... ..|.++++||++.. |.. .. .....+++
T Consensus 1 m~~~~IsDIHG~~~~l~~ll~~i~~~~~~~d~li~lGD~iDr------G~~------------------s~-~v~~~l~~ 55 (235)
T PHA02239 1 MAIYVVPDIHGEYQKLLTIMDKINNERKPEETIVFLGDYVDR------GKR------------------SK-DVVNYIFD 55 (235)
T ss_pred CeEEEEECCCCCHHHHHHHHHHHhhcCCCCCEEEEecCcCCC------CCC------------------hH-HHHHHHHH
Confidence 378999999965322 2344444333 25999999999952 321 00 11222223
Q ss_pred hhhccCCeEEecCCcccc
Q 008823 286 PVLSKVPIMVVEGNHEYE 303 (552)
Q Consensus 286 ~l~~~iP~~~v~GNHE~~ 303 (552)
.+....+++++.||||..
T Consensus 56 ~~~~~~~~~~l~GNHE~~ 73 (235)
T PHA02239 56 LMSNDDNVVTLLGNHDDE 73 (235)
T ss_pred HhhcCCCeEEEECCcHHH
Confidence 223346899999999974
No 90
>cd07386 MPP_DNA_pol_II_small_archeal_C archeal DNA polymerase II, small subunit, C-terminal metallophosphatase domain. The small subunit of the archeal DNA polymerase II contains a C-terminal metallophosphatase domain. This domain is thought to be functionally active because the active site residues required for phosphoesterase activity in other members of this superfamily are intact. The archeal replicative DNA polymerases are thought to possess intrinsic phosphatase activity that hydrolyzes the pyrophosphate released during nucleotide polymerization. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiestera
Probab=96.59 E-value=0.0038 Score=62.35 Aligned_cols=82 Identities=18% Similarity=0.329 Sum_probs=47.6
Q ss_pred EEEeccCCCCCh--HHH----HHHHHHC-----CCCEEEEcCccccccccccCCCCCCcccccCCCCCC-cccchHHHHH
Q 008823 212 AIVGDVGLTYNT--TST----VSHMISN-----RPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPI-HETYQPRWDY 279 (552)
Q Consensus 212 aviGD~g~~~~~--~~~----l~~l~~~-----~pDfvl~~GDl~Yad~~~~~G~~~d~~~~~~~~~~~-~e~y~~~wd~ 279 (552)
++++|+|.+... ... ++.+... ++|.|+++||++...... .+. .... .+.....+..
T Consensus 2 ~~iSDlHl~~~~~~~~~~~~l~~~l~~~~~~~~~~d~lvi~GDl~d~~~~~-~~~----------~~~~~~~~~~~~~~~ 70 (243)
T cd07386 2 VFISDVHVGSKTFLEDAFEKFVRWLNGEDDSASRVKYLIIAGDLVDGIGVY-PGQ----------EEELEILDIYEQYEE 70 (243)
T ss_pred EEecccCCCchhhhHHHHHHHHHHHcCCcccccCccEEEEeCCcccccccC-Ccc----------hhhhhhhhHHHHHHH
Confidence 689999976432 222 2333222 469999999999531000 000 0000 0011123455
Q ss_pred HHHhhhhhhccCCeEEecCCccccc
Q 008823 280 WGRYMQPVLSKVPIMVVEGNHEYEE 304 (552)
Q Consensus 280 ~~~~l~~l~~~iP~~~v~GNHE~~~ 304 (552)
+.++++.+...+|+++++||||...
T Consensus 71 ~~~~l~~L~~~~~v~~ipGNHD~~~ 95 (243)
T cd07386 71 AAEYLSDVPSHIKIIIIPGNHDAVR 95 (243)
T ss_pred HHHHHHhcccCCeEEEeCCCCCccc
Confidence 6677778877899999999999853
No 91
>TIGR00024 SbcD_rel_arch putative phosphoesterase, SbcD/Mre11-related. Members of this uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11. SbcD is a subunit of the SbcCD nuclease of E. coli that can cleave DNA hairpins to unblock stalled DNA replication. All members of this family are archaeal.
Probab=96.53 E-value=0.0063 Score=60.30 Aligned_cols=70 Identities=13% Similarity=0.358 Sum_probs=45.5
Q ss_pred eEEEEEeccCCCCCh--------------HHHHHHHH----HCCCCEEEEcCccccccccccCCCCCCcccccCCCCCCc
Q 008823 209 SRIAIVGDVGLTYNT--------------TSTVSHMI----SNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIH 270 (552)
Q Consensus 209 ~rfaviGD~g~~~~~--------------~~~l~~l~----~~~pDfvl~~GDl~Yad~~~~~G~~~d~~~~~~~~~~~~ 270 (552)
-+.++++|+|.+... .++++++. +.+||.||++||+..... .
T Consensus 15 ~~~LvisDlHLG~~~~~~~~Gi~~P~~~~~~~l~rl~~li~~~~~d~vIi~GDl~h~~~-----~--------------- 74 (225)
T TIGR00024 15 GDKAVIADLHLGFERHLDEQGVMVPGFQFREIIERALSIADKYGIEALIINGDLKHEFK-----K--------------- 74 (225)
T ss_pred cCeEEEEeccCCCHHHHHhcCCcCChhHHHHHHHHHHHHHhhcCCCEEEEcCccccccC-----C---------------
Confidence 367899999987532 13444443 357999999999995311 0
Q ss_pred ccchHHHHHHHHhhhhhhccCCeEEecCCcccc
Q 008823 271 ETYQPRWDYWGRYMQPVLSKVPIMVVEGNHEYE 303 (552)
Q Consensus 271 e~y~~~wd~~~~~l~~l~~~iP~~~v~GNHE~~ 303 (552)
...|..+.++++.+ ..+++.+.||||..
T Consensus 75 ---~~~~~~~~~~l~~~--~~~v~~V~GNHD~~ 102 (225)
T TIGR00024 75 ---GLEWRFIREFIEVT--FRDLILIRGNHDAL 102 (225)
T ss_pred ---hHHHHHHHHHHHhc--CCcEEEECCCCCCc
Confidence 01233444455443 35999999999964
No 92
>PRK09418 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=96.45 E-value=0.049 Score=63.20 Aligned_cols=48 Identities=29% Similarity=0.181 Sum_probs=28.9
Q ss_pred CCCCEEEEEeCCcccccCcCcccchHHHHHHHHHHHHH-cCCcEEEEccccCcee
Q 008823 354 EVTPWLVATWHAPWYSTYKAHYREAECMRVAMEDLLYK-YGVDVVFNGHVHAYER 407 (552)
Q Consensus 354 ~~~pwiIV~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~-y~VdlvlsGH~H~yeR 407 (552)
..+.-||++.|-.+-.... .. .+..+... +.+ -+||++|.||.|..-.
T Consensus 243 ~GaDvIIaLsH~G~~~d~~---~~--~~ena~~~-l~~v~gID~IlgGHsH~~~~ 291 (780)
T PRK09418 243 EGADVIVALAHSGVDKSGY---NV--GMENASYY-LTEVPGVDAVLMGHSHTEVK 291 (780)
T ss_pred cCCCEEEEEeccCcccccc---cc--cchhhhHH-HhcCCCCCEEEECCCCCccc
Confidence 4577899999987654211 10 01111111 234 3899999999998653
No 93
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=96.45 E-value=0.023 Score=69.20 Aligned_cols=49 Identities=27% Similarity=0.268 Sum_probs=31.4
Q ss_pred CCCCEEEEEeCCcccccCcCcccchHHHHHHHHHHHHH-cCCcEEEEccccCcee
Q 008823 354 EVTPWLVATWHAPWYSTYKAHYREAECMRVAMEDLLYK-YGVDVVFNGHVHAYER 407 (552)
Q Consensus 354 ~~~pwiIV~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~-y~VdlvlsGH~H~yeR 407 (552)
.++.-+|++.|-..-........ .....+|.++ -+||++|.||.|....
T Consensus 233 ~gaDvII~l~H~G~~~~~~~~~~-----en~~~~la~~~~gID~Il~GHsH~~~~ 282 (1163)
T PRK09419 233 GGADVIVALAHSGIESEYQSSGA-----EDSVYDLAEKTKGIDAIVAGHQHGLFP 282 (1163)
T ss_pred cCCCEEEEEeccCcCCCCCCCCc-----chHHHHHHHhCCCCcEEEeCCCccccc
Confidence 46778999999987543211111 1223345544 4899999999998643
No 94
>KOG3662 consensus Cell division control protein/predicted DNA repair exonuclease [Replication, recombination and repair]
Probab=96.44 E-value=0.0093 Score=63.35 Aligned_cols=77 Identities=16% Similarity=0.302 Sum_probs=48.3
Q ss_pred CeEEEEEeccCCCCChH--------------HHHHHH-----HHCCCCEEEEcCccccccccccCCCCCCcccccCCCCC
Q 008823 208 PSRIAIVGDVGLTYNTT--------------STVSHM-----ISNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSP 268 (552)
Q Consensus 208 p~rfaviGD~g~~~~~~--------------~~l~~l-----~~~~pDfvl~~GDl~Yad~~~~~G~~~d~~~~~~~~~~ 268 (552)
++|++.++|.|.-.+.. -.+.+. ...+||.++++||+... |...+
T Consensus 48 ~~ki~~vaDPQilg~~~~~~~~~~Ldk~~~D~~lrr~f~~~~~~lkPdvvffLGDLfDe------G~~~~---------- 111 (410)
T KOG3662|consen 48 STKILLVADPQILGNWPKKFLVSWLDKYGNDWYLRRSFDMSQWRLKPDVVFFLGDLFDE------GQWAG---------- 111 (410)
T ss_pred ceEEEEecCchhcCCCCCccccchHHhhhhHHHHHHHHHHHHhccCCCEEEEecccccc------CccCC----------
Confidence 79999999998654210 112221 12599999999999952 43221
Q ss_pred CcccchHHHHHHHHhhhhhh---ccCCeEEecCCcccccc
Q 008823 269 IHETYQPRWDYWGRYMQPVL---SKVPIMVVEGNHEYEEQ 305 (552)
Q Consensus 269 ~~e~y~~~wd~~~~~l~~l~---~~iP~~~v~GNHE~~~~ 305 (552)
+.+|.+..+-++.+. .+++.+.++||||++..
T Consensus 112 -----~eEf~~~~~RfkkIf~~k~~~~~~~i~GNhDIGf~ 146 (410)
T KOG3662|consen 112 -----DEEFKKRYERFKKIFGRKGNIKVIYIAGNHDIGFG 146 (410)
T ss_pred -----hHHHHHHHHHHHHhhCCCCCCeeEEeCCccccccc
Confidence 234433222233332 57999999999999743
No 95
>PRK09420 cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein; Reviewed
Probab=96.41 E-value=0.027 Score=64.36 Aligned_cols=46 Identities=24% Similarity=0.201 Sum_probs=27.7
Q ss_pred CCCCEEEEEeCCcccccCcCcccchHHHHHHHHHHHHH-cCCcEEEEccccCc
Q 008823 354 EVTPWLVATWHAPWYSTYKAHYREAECMRVAMEDLLYK-YGVDVVFNGHVHAY 405 (552)
Q Consensus 354 ~~~pwiIV~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~-y~VdlvlsGH~H~y 405 (552)
.++.-+|++.|-...........+ ++... +.+ -+||++|.||.|..
T Consensus 217 ~gaDvII~LsH~G~~~d~~~~~ae-----n~~~~-l~~v~gID~Il~GHsH~~ 263 (649)
T PRK09420 217 KGADIVVAIPHSGISADPYKAMAE-----NSVYY-LSEVPGIDAIMFGHSHAV 263 (649)
T ss_pred cCCCEEEEEecCCcCCCCcccccc-----chhHH-HhcCCCCCEEEeCCCCcc
Confidence 457789999998764321111111 11112 233 47999999999985
No 96
>PRK00166 apaH diadenosine tetraphosphatase; Reviewed
Probab=96.39 E-value=0.0049 Score=62.93 Aligned_cols=66 Identities=21% Similarity=0.325 Sum_probs=41.4
Q ss_pred EEEEEeccCCCCChH-HHHHHHH-HCCCCEEEEcCccccccccccCCCCCCcccccCCCCCCcccchHHHHHHHHhhhhh
Q 008823 210 RIAIVGDVGLTYNTT-STVSHMI-SNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDYWGRYMQPV 287 (552)
Q Consensus 210 rfaviGD~g~~~~~~-~~l~~l~-~~~pDfvl~~GDl~Yad~~~~~G~~~d~~~~~~~~~~~~e~y~~~wd~~~~~l~~l 287 (552)
+++++||+|.....- ..++++. ..+.|.++++||++.. |.. + .+..+++..+
T Consensus 2 ~~~vIGDIHG~~~~l~~ll~~~~~~~~~D~li~lGDlVdr------Gp~------------------s--~~vl~~l~~l 55 (275)
T PRK00166 2 ATYAIGDIQGCYDELQRLLEKIDFDPAKDTLWLVGDLVNR------GPD------------------S--LEVLRFVKSL 55 (275)
T ss_pred cEEEEEccCCCHHHHHHHHHhcCCCCCCCEEEEeCCccCC------CcC------------------H--HHHHHHHHhc
Confidence 689999999764432 2333332 2367999999999942 321 0 1223333333
Q ss_pred hccCCeEEecCCcccc
Q 008823 288 LSKVPIMVVEGNHEYE 303 (552)
Q Consensus 288 ~~~iP~~~v~GNHE~~ 303 (552)
..++.++.||||..
T Consensus 56 --~~~~~~VlGNHD~~ 69 (275)
T PRK00166 56 --GDSAVTVLGNHDLH 69 (275)
T ss_pred --CCCeEEEecChhHH
Confidence 34688999999984
No 97
>cd07423 MPP_PrpE Bacillus subtilis PrpE and related proteins, metallophosphatase domain. PrpE (protein phosphatase E) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases and a key signal transduction pathway component controlling the expression of spore germination receptors GerA and GerK in Bacillus subtilis. PrpE is closely related to ApaH (also known symmetrical Ap(4)A hydrolase and bis(5'nucleosyl)-tetraphosphatase). PrpE has specificity for phosphotyrosine only, unlike the serine/threonine phosphatases to which it is related. The Bacilli members of this family are single domain proteins while the other members have N- and C-terminal domains in addition to this phosphatase domain. The PPP (phosphoprotein phosphatase) family, to which PrpE belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpA/Prp
Probab=96.37 E-value=0.0048 Score=61.36 Aligned_cols=68 Identities=21% Similarity=0.303 Sum_probs=41.2
Q ss_pred EEEEEeccCCCCCh-HHHHHHHH---HC-------CCCEEEEcCccccccccccCCCCCCcccccCCCCCCcccchHHHH
Q 008823 210 RIAIVGDVGLTYNT-TSTVSHMI---SN-------RPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWD 278 (552)
Q Consensus 210 rfaviGD~g~~~~~-~~~l~~l~---~~-------~pDfvl~~GDl~Yad~~~~~G~~~d~~~~~~~~~~~~e~y~~~wd 278 (552)
||+++||+|..... ...++++. +. +.|.++++||++.. |.. -.
T Consensus 2 ~i~vigDIHG~~~~L~~ll~~~~~~~~~~~~~~~~~~d~lv~lGDlIDr------G~~--------------------s~ 55 (234)
T cd07423 2 PFDIIGDVHGCYDELEELLEKLGYRIKRVGTVTHPEGRRAVFVGDLVDR------GPD--------------------SP 55 (234)
T ss_pred CeEEEEECCCCHHHHHHHHHHcCCccccCccccCCCCCEEEEECCccCC------CCC--------------------HH
Confidence 79999999976433 22333331 11 25899999999942 321 11
Q ss_pred HHHHhhhhhhccCCeEEecCCcccc
Q 008823 279 YWGRYMQPVLSKVPIMVVEGNHEYE 303 (552)
Q Consensus 279 ~~~~~l~~l~~~iP~~~v~GNHE~~ 303 (552)
+..+++..+...-.++.+.||||..
T Consensus 56 evl~~l~~l~~~~~~~~v~GNHE~~ 80 (234)
T cd07423 56 EVLRLVMSMVAAGAALCVPGNHDNK 80 (234)
T ss_pred HHHHHHHHHhhCCcEEEEECCcHHH
Confidence 2233444433334688999999973
No 98
>TIGR01390 CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphodiesterase. 2',3'-cyclic-nucleotide 2'-phosphodiesterase is a bifunctional enzyme localized to the periplasm of Gram-negative bacteria. 2',3'-cyclic-nucleotide 2'-phosphodiesters are intermediates formed during the hydrolysis of RNA by the ribonuclease I, which is also found to the periplasm, and other enzymes of the RNAse T2 family. Bacteria are unable to transport 2',3'-cyclic-nucleotides into the cytoplasm. 2',3'-cyclic-nucleotide 2'-phosphodiesterase contains 2 active sites which catalyze the reactions that convert the 2',3'-cyclic-nucleotide into a 3'-nucleotide, which is then converted into nucleic acid and phosphate. Both final products can be transported into the cytoplasm. Thus, it has been suggested that 2',3'-cyclic-nucleotide 2'-phosphodiesterase has a 'scavenging' function. Experimental evidence indicates that 2',3'-cyclic-nucleotide 2'-phosphodiesterase enables Yersinia enterocolitica O:8 to grow on 2'3'-cAMP as a
Probab=96.19 E-value=0.06 Score=61.34 Aligned_cols=46 Identities=28% Similarity=0.211 Sum_probs=27.9
Q ss_pred CCCCEEEEEeCCcccccCcCcccchHHHHHHHHHHHHH-cCCcEEEEccccCc
Q 008823 354 EVTPWLVATWHAPWYSTYKAHYREAECMRVAMEDLLYK-YGVDVVFNGHVHAY 405 (552)
Q Consensus 354 ~~~pwiIV~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~-y~VdlvlsGH~H~y 405 (552)
..+.-+|++.|............ +. ... .+.+ -+||++|.||.|..
T Consensus 194 ~gaDvII~LsH~G~~~d~~~~~~--en---~~~-~l~~v~gID~Il~GHsH~~ 240 (626)
T TIGR01390 194 KGADIIVALAHSGISADPYQPGA--EN---SAY-YLTKVPGIDAVLFGHSHAV 240 (626)
T ss_pred cCCCEEEEEeccCcCCCcccccc--ch---HHH-HHhcCCCCCEEEcCCCCcc
Confidence 45778999999886542111111 11 111 2333 48999999999985
No 99
>PRK13625 bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional
Probab=96.09 E-value=0.014 Score=58.46 Aligned_cols=67 Identities=21% Similarity=0.243 Sum_probs=39.0
Q ss_pred EEEEEeccCCCCCh-HHHHHHHHH---------CCCCEEEEcCccccccccccCCCCCCcccccCCCCCCcccchHHHHH
Q 008823 210 RIAIVGDVGLTYNT-TSTVSHMIS---------NRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDY 279 (552)
Q Consensus 210 rfaviGD~g~~~~~-~~~l~~l~~---------~~pDfvl~~GDl~Yad~~~~~G~~~d~~~~~~~~~~~~e~y~~~wd~ 279 (552)
|++++||+|..... .+.++++.- ..-|.++++||++.. |.. + .+
T Consensus 2 ~~~vIGDIHG~~~~L~~lL~~~~~~~~~~~~~~~~~d~li~lGDliDR------Gp~------------------S--~~ 55 (245)
T PRK13625 2 KYDIIGDIHGCYQEFQALTEKLGYNWSSGLPVHPDQRKLAFVGDLTDR------GPH------------------S--LR 55 (245)
T ss_pred ceEEEEECccCHHHHHHHHHHcCCCcccCcccCCCCCEEEEECcccCC------CcC------------------h--HH
Confidence 68999999976432 222333211 123689999999952 321 0 01
Q ss_pred HHHhhhhhhccCCeEEecCCccc
Q 008823 280 WGRYMQPVLSKVPIMVVEGNHEY 302 (552)
Q Consensus 280 ~~~~l~~l~~~iP~~~v~GNHE~ 302 (552)
..+.+..+...-.++++.||||.
T Consensus 56 vl~~~~~~~~~~~~~~l~GNHE~ 78 (245)
T PRK13625 56 MIEIVWELVEKKAAYYVPGNHCN 78 (245)
T ss_pred HHHHHHHHhhCCCEEEEeCccHH
Confidence 22233333334578999999996
No 100
>KOG2863 consensus RNA lariat debranching enzyme [RNA processing and modification]
Probab=95.99 E-value=0.013 Score=60.47 Aligned_cols=84 Identities=24% Similarity=0.343 Sum_probs=50.5
Q ss_pred eEEEEEeccCCCCCh-HHHHHHHHHC---CCCEEEEcCccccccccccCCCCCCcccccCCCCCCcccchHHHHHHHHhh
Q 008823 209 SRIAIVGDVGLTYNT-TSTVSHMISN---RPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDYWGRYM 284 (552)
Q Consensus 209 ~rfaviGD~g~~~~~-~~~l~~l~~~---~pDfvl~~GDl~Yad~~~~~G~~~d~~~~~~~~~~~~e~y~~~wd~~~~~l 284 (552)
+||+|-|++|...+. -.++..+.+. ++|++|++||+=-- .|+..-.|- .+...|+..-+-|.-.-
T Consensus 1 MrIaVqGCcHG~Ld~iYkti~~~ek~~~tkVDLLlccGDFQav----Rn~~D~~si-------avPpKy~~m~~F~~YYs 69 (456)
T KOG2863|consen 1 MRIAVQGCCHGELDNIYKTISLIEKRGNTKVDLLLCCGDFQAV----RNEQDLKSI-------AVPPKYRRMGDFYKYYS 69 (456)
T ss_pred CceeeecccchhHHHHHHHHHHHHHcCCCCccEEEEccchHhh----cchhhcccc-------cCCHHHHHHHHHHHHhC
Confidence 489999999976432 2355555554 78999999998421 133221111 12334443222222222
Q ss_pred hhhhccCCeEEecCCcccc
Q 008823 285 QPVLSKVPIMVVEGNHEYE 303 (552)
Q Consensus 285 ~~l~~~iP~~~v~GNHE~~ 303 (552)
..+.+.+|.+++-||||..
T Consensus 70 ge~~APVlTIFIGGNHEAs 88 (456)
T KOG2863|consen 70 GEIKAPVLTIFIGGNHEAS 88 (456)
T ss_pred CcccCceeEEEecCchHHH
Confidence 3456789999999999985
No 101
>PF00041 fn3: Fibronectin type III domain; InterPro: IPR003961 Fibronectins are multi-domain glycoproteins found in a soluble form in plasma, and in an insoluble form in loose connective tissue and basement membranes []. They contain multiple copies of 3 repeat regions (types I, II and III), which bind to a variety of substances including heparin, collagen, DNA, actin, fibrin and fibronectin receptors on cell surfaces. The wide variety of these substances means that fibronectins are involved in a number of important functions: e.g., wound healing; cell adhesion; blood coagulation; cell differentiation and migration; maintenance of the cellular cytoskeleton; and tumour metastasis []. The role of fibronectin in cell differentiation is demonstrated by the marked reduction in the expression of its gene when neoplastic transformation occurs. Cell attachment has been found to be mediated by the binding of the tetrapeptide RGDS to integrins on the cell surface [], although related sequences can also display cell adhesion activity. Plasma fibronectin occurs as a dimer of 2 different subunits, linked together by 2 disulphide bonds near the C terminus. The difference in the 2 chains occurs in the type III repeat region and is caused by alternative splicing of the mRNA from one gene []. The observation that, in a given protein, an individual repeat of one of the 3 types (e.g., the first FnIII repeat) shows much less similarity to its subsequent tandem repeats within that protein than to its equivalent repeat between fibronectins from other species, has suggested that the repeating structure of fibronectin arose at an early stage of evolution. It also seems to suggest that the structure is subject to high selective pressure []. The fibronectin type III repeat region is an approximately 100 amino acid domain, different tandem repeats of which contain binding sites for DNA, heparin and the cell surface []. The superfamily of sequences believed to contain FnIII repeats represents 45 different families, the majority of which are involved in cell surface binding in some manner, or are receptor protein tyrosine kinases, or cytokine receptors.; GO: 0005515 protein binding; PDB: 1UEM_A 1TDQ_A 1X5I_A 2IC2_B 2IBG_C 2IBB_A 3R8Q_A 2FNB_A 1FNH_A 2EDB_A ....
Probab=95.86 E-value=0.033 Score=45.00 Aligned_cols=76 Identities=26% Similarity=0.292 Sum_probs=45.6
Q ss_pred CCceEEEeecCCCCeeEEEEEeCcccccCCCCCCCCCCCccEEEEcccCCCCCeEEEEEEEEEeeeeccCCccccccCeE
Q 008823 85 EPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSGII 164 (552)
Q Consensus 85 ~P~qi~lt~~~~p~s~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~~~g~~~~y~~~~~~~g~~~y~s~~~ 164 (552)
.|+.+++.-.. .+++.|+|..... .+.. ...=.|+|....+.... .... . ++-.
T Consensus 2 ~P~~l~v~~~~-~~sv~v~W~~~~~-~~~~-------~~~y~v~~~~~~~~~~~------~~~~--~---------~~~~ 55 (85)
T PF00041_consen 2 APENLSVSNIS-PTSVTVSWKPPSS-GNGP-------ITGYRVEYRSVNSTSDW------QEVT--V---------PGNE 55 (85)
T ss_dssp SSEEEEEEEEC-SSEEEEEEEESSS-TSSS-------ESEEEEEEEETTSSSEE------EEEE--E---------ETTS
T ss_pred cCcCeEEEECC-CCEEEEEEECCCC-CCCC-------eeEEEEEEEecccceee------eeee--e---------eeee
Confidence 47888887653 7899999998641 1111 12335666554433200 0000 0 1111
Q ss_pred EEEEeCCCCCCCEEEEEEecCC
Q 008823 165 HHVRLTGLKPDTLYHYQCGDPS 186 (552)
Q Consensus 165 h~v~ltgL~P~T~Y~Yrvg~~~ 186 (552)
+.++|++|+|+|.|.++|..-+
T Consensus 56 ~~~~i~~L~p~t~Y~~~v~a~~ 77 (85)
T PF00041_consen 56 TSYTITGLQPGTTYEFRVRAVN 77 (85)
T ss_dssp SEEEEESCCTTSEEEEEEEEEE
T ss_pred eeeeeccCCCCCEEEEEEEEEe
Confidence 4778999999999999998544
No 102
>cd07413 MPP_PA3087 Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain. PA3087 is an uncharacterized protein from Pseudomonas aeruginosa with a metallophosphatase domain that belongs to the phosphoprotein phosphatase (PPP) family. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of
Probab=95.50 E-value=0.018 Score=56.85 Aligned_cols=67 Identities=15% Similarity=0.244 Sum_probs=39.0
Q ss_pred EEEEeccCCCCCh-HHHHHHHHHC--------CCCEEEEcCccccccccccCCCCCCcccccCCCCCCcccchHHHHHHH
Q 008823 211 IAIVGDVGLTYNT-TSTVSHMISN--------RPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDYWG 281 (552)
Q Consensus 211 faviGD~g~~~~~-~~~l~~l~~~--------~pDfvl~~GDl~Yad~~~~~G~~~d~~~~~~~~~~~~e~y~~~wd~~~ 281 (552)
+.+|||+|..... ...++++... ..|.++++||++.. |.. + .+..
T Consensus 1 ~~vIGDIHG~~~~L~~lL~~i~~~~~~~~~~~~~d~lvflGD~IDR------Gp~------------------S--~~vl 54 (222)
T cd07413 1 YDFIGDIHGHAEKLVVLLHKLGYQELSGVYRHPERQVVFLGDLIDR------GPE------------------I--RELL 54 (222)
T ss_pred CEEEEeccCCHHHHHHHHHHcCCCccccccCCCCCEEEEeCcccCC------CCC------------------H--HHHH
Confidence 3689999976433 2233333211 35799999999942 321 0 1223
Q ss_pred HhhhhhhccCCeEEecCCcccc
Q 008823 282 RYMQPVLSKVPIMVVEGNHEYE 303 (552)
Q Consensus 282 ~~l~~l~~~iP~~~v~GNHE~~ 303 (552)
+.+..+...-.++.+.||||..
T Consensus 55 ~~l~~l~~~~~~~~l~GNHE~~ 76 (222)
T cd07413 55 EIVKSMVDAGHALAVMGNHEFN 76 (222)
T ss_pred HHHHHhhcCCCEEEEEccCcHH
Confidence 3333333333688999999973
No 103
>cd07421 MPP_Rhilphs Rhilph phosphatases, metallophosphatase domain. Rhilphs (Rhizobiales/ Rhodobacterales/ Rhodospirillaceae-like phosphatases) are a phylogenetically distinct group of PPP (phosphoprotein phosphatases), found only in land plants. They are named for their close relationship to to PPP phosphatases from alpha-Proteobacteria, including Rhizobiales, Rhodobacterales and Rhodospirillaceae. The PPP (phosphoprotein phosphatase) family, to which the Rhilphs belong, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central rol
Probab=95.28 E-value=0.032 Score=57.16 Aligned_cols=37 Identities=19% Similarity=0.264 Sum_probs=25.4
Q ss_pred EEEEEeccCCCCCh-HHHHHHHHHC------CCCEEEEcCcccc
Q 008823 210 RIAIVGDVGLTYNT-TSTVSHMISN------RPDLILLVGDVTY 246 (552)
Q Consensus 210 rfaviGD~g~~~~~-~~~l~~l~~~------~pDfvl~~GDl~Y 246 (552)
++.++||+|..... ..+++.+.+. ..+.+|++||++.
T Consensus 3 ~iyaIGDIHG~~d~L~~lL~~I~~d~~~~~~~~~~iVfLGDyVD 46 (304)
T cd07421 3 VVICVGDIHGYISKLNNLWLNLQSALGPSDFASALVIFLGDYCD 46 (304)
T ss_pred eEEEEEeccCCHHHHHHHHHHhhhhcCcCcCCCcEEEEeCCcCC
Confidence 68999999977543 2334444322 3568999999994
No 104
>cd07422 MPP_ApaH Escherichia coli ApaH and related proteins, metallophosphatase domain. ApaH (also known as symmetrically cleaving Ap4A hydrolase and bis(5'nucleosyl)-tetraphosphatase) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases that hydrolyzes the nucleotide-signaling molecule diadenosine tetraphosphate (Ap(4)A) into two ADP and also hydrolyzes Ap(5)A, Gp(4)G, and other extending compounds. Null mutations in apaH result in high intracellular levels of Ap(4)A which correlate with multiple phenotypes, including a decreased expression of catabolite-repressible genes, a reduction in the expression of flagellar operons, and an increased sensitivity to UV and heat. Ap4A hydrolase is important in responding to heat shock and oxidative stress via regulating the concentration of Ap4A in bacteria. Ap4A hydrolase is also thought to play a role in siderophore production, but the mechanism by which ApaH interacts with siderophore pathwa
Probab=95.25 E-value=0.022 Score=57.56 Aligned_cols=64 Identities=22% Similarity=0.294 Sum_probs=39.5
Q ss_pred EEEeccCCCCCh-HHHHHHHHH-CCCCEEEEcCccccccccccCCCCCCcccccCCCCCCcccchHHHHHHHHhhhhhhc
Q 008823 212 AIVGDVGLTYNT-TSTVSHMIS-NRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDYWGRYMQPVLS 289 (552)
Q Consensus 212 aviGD~g~~~~~-~~~l~~l~~-~~pDfvl~~GDl~Yad~~~~~G~~~d~~~~~~~~~~~~e~y~~~wd~~~~~l~~l~~ 289 (552)
.+|||+|..... .+.++++.. .+.|.++++||++.. |.. + .+..+++..+.
T Consensus 2 yvIGDIHG~~~~L~~LL~~i~~~~~~D~Li~lGDlVdR------Gp~------------------s--~evl~~l~~l~- 54 (257)
T cd07422 2 YAIGDIQGCYDELQRLLEKINFDPAKDRLWLVGDLVNR------GPD------------------S--LETLRFVKSLG- 54 (257)
T ss_pred EEEECCCCCHHHHHHHHHhcCCCCCCCEEEEecCcCCC------CcC------------------H--HHHHHHHHhcC-
Confidence 589999976433 233444432 257999999999942 321 1 12333443332
Q ss_pred cCCeEEecCCcccc
Q 008823 290 KVPIMVVEGNHEYE 303 (552)
Q Consensus 290 ~iP~~~v~GNHE~~ 303 (552)
..+..+.||||..
T Consensus 55 -~~v~~VlGNHD~~ 67 (257)
T cd07422 55 -DSAKTVLGNHDLH 67 (257)
T ss_pred -CCeEEEcCCchHH
Confidence 3688999999984
No 105
>COG1311 HYS2 Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B [DNA replication, recombination, and repair]
Probab=95.19 E-value=0.13 Score=55.68 Aligned_cols=89 Identities=16% Similarity=0.315 Sum_probs=55.2
Q ss_pred CCeEEEEEeccCCCCCh------HHHHHHHH-----HCCCCEEEEcCccccccccccCCCCCCcccccCCCCCCcccchH
Q 008823 207 YPSRIAIVGDVGLTYNT------TSTVSHMI-----SNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQP 275 (552)
Q Consensus 207 ~p~rfaviGD~g~~~~~------~~~l~~l~-----~~~pDfvl~~GDl~Yad~~~~~G~~~d~~~~~~~~~~~~e~y~~ 275 (552)
..+++++++|.|.+... ...++.+. +.+...++.+||++..=+ .|...-.+..+.+-| .
T Consensus 224 e~v~v~~isDih~GSk~F~~~~f~~fi~wl~g~~~~a~~vkyliiagd~VDGig---------iYpgq~~eL~i~di~-~ 293 (481)
T COG1311 224 ERVYVALISDIHRGSKEFLEDEFEKFIDWLNGPGDLASRVKYLIIAGDVVDGIG---------IYPGQEEELVIADIY-E 293 (481)
T ss_pred cceEEEEEeeeecccHHHHHHHHHHHHHHhcCCcccccceEEEEEecccccccc---------cccCcccccccccch-H
Confidence 46889999999986421 22333332 124578999999994211 121111122222223 2
Q ss_pred HHHHHHHhhhhhhccCCeEEecCCcccccc
Q 008823 276 RWDYWGRYMQPVLSKVPIMVVEGNHEYEEQ 305 (552)
Q Consensus 276 ~wd~~~~~l~~l~~~iP~~~v~GNHE~~~~ 305 (552)
+++.+.+++..+-..+-+++.|||||....
T Consensus 294 qy~~~A~~L~~vp~~I~v~i~PGnhDa~r~ 323 (481)
T COG1311 294 QYEELAEFLDQVPEHIKVFIMPGNHDAVRQ 323 (481)
T ss_pred HHHHHHHHHhhCCCCceEEEecCCCCcccc
Confidence 556777788777788889999999998643
No 106
>cd00144 MPP_PPP_family phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain. The PPP (phosphoprotein phosphatase) family is one of two known protein phosphatase families specific for serine and threonine. This family includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate
Probab=95.10 E-value=0.025 Score=55.38 Aligned_cols=35 Identities=14% Similarity=0.249 Sum_probs=23.1
Q ss_pred EEEeccCCCCCh-HHHHHHHHHCCCCEEEEcCcccc
Q 008823 212 AIVGDVGLTYNT-TSTVSHMISNRPDLILLVGDVTY 246 (552)
Q Consensus 212 aviGD~g~~~~~-~~~l~~l~~~~pDfvl~~GDl~Y 246 (552)
.++||+|..... ...++.+.....|.+|++||++.
T Consensus 1 ~~igDiHg~~~~l~~~l~~~~~~~~d~li~lGD~vd 36 (225)
T cd00144 1 YVIGDIHGCLDDLLRLLEKIGFPPNDKLIFLGDYVD 36 (225)
T ss_pred CEEeCCCCCHHHHHHHHHHhCCCCCCEEEEECCEeC
Confidence 378999965322 12233333347899999999994
No 107
>COG1407 Predicted ICC-like phosphoesterases [General function prediction only]
Probab=94.73 E-value=0.076 Score=52.60 Aligned_cols=73 Identities=16% Similarity=0.421 Sum_probs=46.7
Q ss_pred eEEEEEeccCCCCChH--------------H---HHHH-HHHCCCCEEEEcCccccccccccCCCCCCcccccCCCCCCc
Q 008823 209 SRIAIVGDVGLTYNTT--------------S---TVSH-MISNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIH 270 (552)
Q Consensus 209 ~rfaviGD~g~~~~~~--------------~---~l~~-l~~~~pDfvl~~GDl~Yad~~~~~G~~~d~~~~~~~~~~~~ 270 (552)
-+.+|++|+|.++... . .+++ +.+.+|+-+|.+||+-.+- +.
T Consensus 20 ~~~lVvADlHlG~e~~~~r~Gi~lP~~~~~~~~~~l~~ii~~~~p~~lIilGD~KH~~-----~~--------------- 79 (235)
T COG1407 20 GRTLVVADLHLGYEESLARRGINLPRYQTDRILKRLDRIIERYGPKRLIILGDLKHEF-----GK--------------- 79 (235)
T ss_pred CcEEEEEecccchhHHHHhcCcccCchhHHHHHHHHHHHHHhcCCCEEEEcCcccccc-----Cc---------------
Confidence 3789999999986421 1 2332 2356999999999997521 11
Q ss_pred ccchHHHHHHHHhhhhhhccCCeEEecCCcccc
Q 008823 271 ETYQPRWDYWGRYMQPVLSKVPIMVVEGNHEYE 303 (552)
Q Consensus 271 e~y~~~wd~~~~~l~~l~~~iP~~~v~GNHE~~ 303 (552)
.....|+....+++.+... -++.+.||||-.
T Consensus 80 -~~~~e~~~~~~f~~~~~~~-evi~i~GNHD~~ 110 (235)
T COG1407 80 -SLRQEKEEVREFLELLDER-EVIIIRGNHDNG 110 (235)
T ss_pred -cccccHHHHHHHHHHhccC-cEEEEeccCCCc
Confidence 0123455555555554333 599999999975
No 108
>TIGR00668 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical). Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase.
Probab=94.25 E-value=0.059 Score=54.96 Aligned_cols=37 Identities=19% Similarity=0.355 Sum_probs=25.9
Q ss_pred EEEEEeccCCCCCh-HHHHHHHH-HCCCCEEEEcCcccc
Q 008823 210 RIAIVGDVGLTYNT-TSTVSHMI-SNRPDLILLVGDVTY 246 (552)
Q Consensus 210 rfaviGD~g~~~~~-~~~l~~l~-~~~pDfvl~~GDl~Y 246 (552)
++.+|||+|..... ...++++. ....|-++++||++.
T Consensus 2 ~~YvIGDIHGc~daL~~LL~~i~f~~~~D~l~~lGDlVd 40 (279)
T TIGR00668 2 ATYLIGDLHGCYDELQALLERVEFDPGQDTLWLTGDLVA 40 (279)
T ss_pred cEEEEEcccCCHHHHHHHHHHhCcCCCCCEEEEeCCccC
Confidence 46899999986543 33445543 225689999999994
No 109
>COG5555 Cytolysin, a secreted calcineurin-like phosphatase [Cell motility and secretion]
Probab=93.87 E-value=0.071 Score=53.61 Aligned_cols=127 Identities=22% Similarity=0.324 Sum_probs=76.5
Q ss_pred HhhhhhhccCCeEEecCCccccccccc-------hhhhhhhc-------ccCCCCCC-CCCCCceeEEeehh--------
Q 008823 282 RYMQPVLSKVPIMVVEGNHEYEEQAEN-------RTFVAYTS-------RFAFPSKE-SGSLSKFYYSFNAG-------- 338 (552)
Q Consensus 282 ~~l~~l~~~iP~~~v~GNHE~~~~~~~-------~~f~~y~~-------rF~~P~~~-~~~~~~~yYsfd~G-------- 338 (552)
+...++...+|+++-.||||...+.-. +....|.. .|.-|... .-.....-||++.|
T Consensus 162 q~vG~~h~H~PvYvGlgnhdldq~gpph~~DWyRrElrdyve~~Hr~~vf~Kppvp~atYd~l~d~ySwdwgglhlvh~h 241 (392)
T COG5555 162 QDVGNIHMHYPVYVGLGNHDLDQKGPPHSLDWYRRELRDYVENYHRSDVFWKPPVPPATYDQLKDRYSWDWGGLHLVHYH 241 (392)
T ss_pred cCCCCceeeeeeEeccCchhhcccCCCCchhHHHHHHHHHHHhhcCcCcccCCCCCcccccccchheeccccceeEEEEe
Confidence 344556677999999999999744221 11122211 11111110 01223445777776
Q ss_pred -----------HHHHHHHHHHhhcccCCCCEEEEEeCCcccccCcCcccc----------------hHHHHHHHHHHHHH
Q 008823 339 -----------DQYKWLEEDLANVEREVTPWLVATWHAPWYSTYKAHYRE----------------AECMRVAMEDLLYK 391 (552)
Q Consensus 339 -----------~Q~~WL~~~L~~~~r~~~pwiIV~~H~P~y~s~~~~~~~----------------~~~~r~~l~~ll~~ 391 (552)
.-+-||+.+|........| ++++.|.-+-.-..+.+.. ....|.++...+..
T Consensus 242 rf~Gd~~~ga~sslpwlk~dl~~~aadgrp-v~LfqhyGwdtfsteawdpAsrT~Dd~Gsgaphww~a~er~all~~lqG 320 (392)
T COG5555 242 RFIGDAEPGANSSLPWLKVDLIYSAADGRP-VYLFQHYGWDTFSTEAWDPASRTLDDTGSGAPHWWPAPERGALLFFLQG 320 (392)
T ss_pred eeccccCCCccccCcceeccceeeccCCCc-eeehhhhCccceeccccCchhcccccCCCCCCCCCCCCCcchHHHhhcC
Confidence 5678999999875544445 7888887654321111110 12347788889999
Q ss_pred cCCcEEEEccccCceeee
Q 008823 392 YGVDVVFNGHVHAYERSN 409 (552)
Q Consensus 392 y~VdlvlsGH~H~yeR~~ 409 (552)
|+|.-.+.||.|.+--.+
T Consensus 321 YNvvg~fhGhkhd~~may 338 (392)
T COG5555 321 YNVVGTFHGHKHDFNMAY 338 (392)
T ss_pred ceeEEeccccccccceee
Confidence 999999999999874444
No 110
>KOG4419 consensus 5' nucleotidase [Nucleotide transport and metabolism]
Probab=93.23 E-value=0.38 Score=53.21 Aligned_cols=57 Identities=18% Similarity=0.292 Sum_probs=37.1
Q ss_pred HHHHHHHHHHhhcccCCCCEEEEEeCCcccccCcCcccchHHHHHHHHHHHHHc-CCcE-EEEccccCce
Q 008823 339 DQYKWLEEDLANVEREVTPWLVATWHAPWYSTYKAHYREAECMRVAMEDLLYKY-GVDV-VFNGHVHAYE 406 (552)
Q Consensus 339 ~Q~~WL~~~L~~~~r~~~pwiIV~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~y-~Vdl-vlsGH~H~ye 406 (552)
.|.+|-.+.++. .+..-+|++.|-|.-.. .+ ....+..+...+ ++++ ||.||.|...
T Consensus 212 ~~~~~~~~m~~~---~~idlii~lgH~~~~~~-----~e---~~~~~~~ir~~~p~t~IqviGGHshird 270 (602)
T KOG4419|consen 212 TQSEWEQDMVNT---TDIDLIIALGHSPVRDD-----DE---WKSLHAEIRKVHPNTPIQVIGGHSHIRD 270 (602)
T ss_pred hccchHHHHhhc---cCccEEEEecccccccc-----hh---hhhHHHHHhhhCCCCceEEECchhhhhh
Confidence 788888777776 45567899999997432 11 111333444444 5788 9999999743
No 111
>COG1692 Calcineurin-like phosphoesterase [General function prediction only]
Probab=92.53 E-value=3.1 Score=41.49 Aligned_cols=176 Identities=22% Similarity=0.319 Sum_probs=93.9
Q ss_pred eEEEEEeccCCCCChHHH---HHHHHH-CCCCEEEEcCccccccccccCCCCCCcccccCCCCCCcccchHHHHHHHHhh
Q 008823 209 SRIAIVGDVGLTYNTTST---VSHMIS-NRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDYWGRYM 284 (552)
Q Consensus 209 ~rfaviGD~g~~~~~~~~---l~~l~~-~~pDfvl~~GDl~Yad~~~~~G~~~d~~~~~~~~~~~~e~y~~~wd~~~~~l 284 (552)
+|++++||+=........ +..+.+ .++||||..|-++- +|.+. .|+.+..++
T Consensus 1 mriLfiGDvvGk~Gr~~v~~~Lp~lk~kyk~dfvI~N~ENaa------~G~Gi------------------t~k~y~~l~ 56 (266)
T COG1692 1 MRILFIGDVVGKPGRKAVKEHLPQLKSKYKIDFVIVNGENAA------GGFGI------------------TEKIYKELL 56 (266)
T ss_pred CeEEEEecccCcchHHHHHHHhHHHHHhhcCcEEEEcCcccc------CCcCC------------------CHHHHHHHH
Confidence 489999998655443333 333443 38999999999883 34321 233444443
Q ss_pred hhhhccCCeEEecCCccccccccchhhhhhhcccCCCCCCC-CCCCceeEEeeh-h-------------------HHHHH
Q 008823 285 QPVLSKVPIMVVEGNHEYEEQAENRTFVAYTSRFAFPSKES-GSLSKFYYSFNA-G-------------------DQYKW 343 (552)
Q Consensus 285 ~~l~~~iP~~~v~GNHE~~~~~~~~~f~~y~~rF~~P~~~~-~~~~~~yYsfd~-G-------------------~Q~~W 343 (552)
+. .+- +++.|||=+..... ..|..-..++--|.+-+ +..+.-|+-|+. | .-++=
T Consensus 57 ~~---G~d-viT~GNH~wd~~ei-~~~i~~~~~ilRP~N~p~~~~G~G~~~f~~ng~ki~V~Nl~Grv~m~~~~d~PF~~ 131 (266)
T COG1692 57 EA---GAD-VITLGNHTWDQKEI-LDFIDNADRILRPANYPDGTPGKGSRIFKINGKKLAVINLMGRVFMPPALDNPFKA 131 (266)
T ss_pred Hh---CCC-EEecccccccchHH-HHHhhcccceeccCCCCCCCCcceEEEEEeCCcEEEEEEeeccccCccccCCHHHH
Confidence 32 333 46799998853211 11111112222233311 112222333332 2 33444
Q ss_pred HHHHHhhcccCCCCEEEEEeCCcccccCcCcccchHHHHHHHHHHHHHcCCcEEEEccccCceeeeecccCccCCCCCeE
Q 008823 344 LEEDLANVEREVTPWLVATWHAPWYSTYKAHYREAECMRVAMEDLLYKYGVDVVFNGHVHAYERSNRVYNYTLDPCGPVH 423 (552)
Q Consensus 344 L~~~L~~~~r~~~pwiIV~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~y~VdlvlsGH~H~yeR~~pv~n~~~~~~g~vy 423 (552)
+++.|...+ ..++.+||-+|.=--+. .++| -++.+.+|.+|+.=|+|.-.--.++ -+.|+.|
T Consensus 132 ~d~l~~~~~-~~~~~iiVDFHAEtTSE-----------K~a~-g~yldGrvsavvGTHTHV~TaD~rI-----L~~GTay 193 (266)
T COG1692 132 ADKLLDEIK-LGTDLIIVDFHAETTSE-----------KNAF-GWYLDGRVSAVVGTHTHVPTADERI-----LPKGTAY 193 (266)
T ss_pred HHHHHHhCc-cCCceEEEEccccchhh-----------hhhh-heEEcCeEEEEEeccCcccccccee-----cCCCcEE
Confidence 556666544 34578999998643221 1111 2334557999999999975444332 4679999
Q ss_pred EEe-CCCCc
Q 008823 424 ITV-GDGGN 431 (552)
Q Consensus 424 iv~-G~gG~ 431 (552)
++. |+-|.
T Consensus 194 iTDvGMtG~ 202 (266)
T COG1692 194 ITDVGMTGP 202 (266)
T ss_pred EecCccccc
Confidence 874 55444
No 112
>KOG2310 consensus DNA repair exonuclease MRE11 [Replication, recombination and repair]
Probab=92.25 E-value=0.41 Score=52.30 Aligned_cols=42 Identities=33% Similarity=0.396 Sum_probs=31.8
Q ss_pred CCeEEEEEeccCCCCCh---------HHHHHHH----HHCCCCEEEEcCcccccc
Q 008823 207 YPSRIAIVGDVGLTYNT---------TSTVSHM----ISNRPDLILLVGDVTYAN 248 (552)
Q Consensus 207 ~p~rfaviGD~g~~~~~---------~~~l~~l----~~~~pDfvl~~GDl~Yad 248 (552)
..+||+|..|.|.+++- ..+++.+ .++++||||..||++-.+
T Consensus 12 ntirILVaTD~HlGY~EkD~vrg~DSf~tFeEIl~iA~e~~VDmiLlGGDLFHeN 66 (646)
T KOG2310|consen 12 NTIRILVATDNHLGYGEKDAVRGDDSFVTFEEILEIAQENDVDMILLGGDLFHEN 66 (646)
T ss_pred cceEEEEeecCccccccCCcccccchHHHHHHHHHHHHhcCCcEEEecCcccccC
Confidence 36999999999998742 2233333 357999999999999765
No 113
>cd07416 MPP_PP2B PP2B, metallophosphatase domain. PP2B (calcineurin) is a unique serine/threonine protein phosphatase in its regulation by a second messenger (calcium and calmodulin). PP2B is involved in many biological processes including immune responses, the second messenger cAMP pathway, sodium/potassium ion transport in the nephron, cell cycle progression in lower eukaryotes, cardiac hypertrophy, and memory formation. PP2B is highly conserved from yeast to humans, but is absent from plants. PP2B is a heterodimer consisting of a catalytic subunit (CnA) and a regulatory subunit (CnB); CnB contains four Ca2+ binding motifs referred to as EF hands. The PPP (phosphoprotein phosphatase) family, to which PP2B belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -G
Probab=91.59 E-value=0.27 Score=50.97 Aligned_cols=22 Identities=18% Similarity=0.175 Sum_probs=18.4
Q ss_pred HHHHHHHHHHcCCcEEEEcccc
Q 008823 382 RVAMEDLLYKYGVDVVFNGHVH 403 (552)
Q Consensus 382 r~~l~~ll~~y~VdlvlsGH~H 403 (552)
.+++++.|++.+.++++=||.-
T Consensus 222 ~~~~~~Fl~~n~l~~iiR~He~ 243 (305)
T cd07416 222 YRAVCEFLQKNNLLSIIRAHEA 243 (305)
T ss_pred HHHHHHHHHHcCCeEEEEeccc
Confidence 4677888999999999999874
No 114
>PF13277 YmdB: YmdB-like protein; PDB: 2CV9_B 2Z06_C.
Probab=91.41 E-value=3.6 Score=41.26 Aligned_cols=173 Identities=19% Similarity=0.280 Sum_probs=79.1
Q ss_pred EEEeccCCCCChH---HHHHHHHH-CCCCEEEEcCccccccccccCCCCCCcccccCCCCCCcccchHHHHHHHHhhhhh
Q 008823 212 AIVGDVGLTYNTT---STVSHMIS-NRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDYWGRYMQPV 287 (552)
Q Consensus 212 aviGD~g~~~~~~---~~l~~l~~-~~pDfvl~~GDl~Yad~~~~~G~~~d~~~~~~~~~~~~e~y~~~wd~~~~~l~~l 287 (552)
+++||.=...... ..+..+.+ .++||||..|.++- .|.+. ....+.++++
T Consensus 1 LfiGDIvG~~Gr~~v~~~Lp~L~~~~~~DfVIaNgENaa------~G~Gi------------------t~~~~~~L~~-- 54 (253)
T PF13277_consen 1 LFIGDIVGKPGRRAVKEHLPELKEEYGIDFVIANGENAA------GGFGI------------------TPKIAEELFK-- 54 (253)
T ss_dssp EEE-EBBCHHHHHHHHHHHHHHGG--G-SEEEEE-TTTT------TTSS--------------------HHHHHHHHH--
T ss_pred CeEEecCCHHHHHHHHHHHHHHHhhcCCCEEEECCcccC------CCCCC------------------CHHHHHHHHh--
Confidence 3577764332222 22333433 48999999999983 34321 0112222221
Q ss_pred hccCCeEEecCCccccccccchhhhhhh---cccCCCCCCC-CCCCceeEEeehh-------------------HHHHHH
Q 008823 288 LSKVPIMVVEGNHEYEEQAENRTFVAYT---SRFAFPSKES-GSLSKFYYSFNAG-------------------DQYKWL 344 (552)
Q Consensus 288 ~~~iP~~~v~GNHE~~~~~~~~~f~~y~---~rF~~P~~~~-~~~~~~yYsfd~G-------------------~Q~~WL 344 (552)
..+- ..+.|||=+.... ...|. .+.--|.|-+ +..+.-|..|+.+ .-+..+
T Consensus 55 -~GvD-viT~GNH~wdkke----i~~~i~~~~~ilRPaN~p~~~pG~G~~i~~~~g~kv~ViNl~Gr~fm~~~~~PF~~~ 128 (253)
T PF13277_consen 55 -AGVD-VITMGNHIWDKKE----IFDFIDKEPRILRPANYPPGTPGRGYRIFEKNGKKVAVINLMGRVFMPPIDCPFRAA 128 (253)
T ss_dssp -HT-S-EEE--TTTTSSTT----HHHHHHH-SSEE--TTS-TT-SSBSEEEEEETTEEEEEEEEE--TTS---S-HHHHH
T ss_pred -cCCC-EEecCcccccCcH----HHHHHhcCCCcEECCCCCCCCCcCcEEEEEECCEEEEEEECcccccCCCCCChHHHH
Confidence 2344 4678999886322 22221 1222233321 2345567666654 233444
Q ss_pred HHHHhhcccCCCCEEEEEeCCcccccCcCcccchHHHHHHHHHHHHHcCCcEEEEccccCceeeeecccCccCCCCCeEE
Q 008823 345 EEDLANVEREVTPWLVATWHAPWYSTYKAHYREAECMRVAMEDLLYKYGVDVVFNGHVHAYERSNRVYNYTLDPCGPVHI 424 (552)
Q Consensus 345 ~~~L~~~~r~~~pwiIV~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~y~VdlvlsGH~H~yeR~~pv~n~~~~~~g~vyi 424 (552)
++.|++. +.+++.+||=+|.=.-+ ...+ .-.+..-+|.+|+.=|+|.-.--.+ +-|+|+.||
T Consensus 129 d~~l~~l-~~~~~~iiVDFHAEaTS-----------EK~A-~g~~lDGrvsaV~GTHTHVqTaDer-----ILp~GTaYi 190 (253)
T PF13277_consen 129 DRLLEEL-KEETDIIIVDFHAEATS-----------EKQA-MGWYLDGRVSAVVGTHTHVQTADER-----ILPGGTAYI 190 (253)
T ss_dssp HHHHHH------SEEEEEEE-S-HH-----------HHHH-HHHHHBTTBSEEEEESSSS-BS--E-----E-TTS-EEE
T ss_pred HHHHHhc-cccCCEEEEEeecCcHH-----------HHHH-HHHHhCCcEEEEEeCCCCccCchhh-----ccCCCCEEE
Confidence 4444443 24577899988853211 1122 2455677899999999997433222 247899999
Q ss_pred Ee-CCCCccCC
Q 008823 425 TV-GDGGNREK 434 (552)
Q Consensus 425 v~-G~gG~~e~ 434 (552)
+- |.-|...+
T Consensus 191 TDvGMtG~~ds 201 (253)
T PF13277_consen 191 TDVGMTGPYDS 201 (253)
T ss_dssp S---EBEESSS
T ss_pred ecCccccCccc
Confidence 74 66666543
No 115
>smart00156 PP2Ac Protein phosphatase 2A homologues, catalytic domain. Large family of serine/threonine phosphatases, that includes PP1, PP2A and PP2B (calcineurin) family members.
Probab=90.75 E-value=0.44 Score=48.57 Aligned_cols=37 Identities=11% Similarity=0.166 Sum_probs=24.1
Q ss_pred EEEEEeccCCCCChH-HHHHHHHHCCCCEEEEcCcccc
Q 008823 210 RIAIVGDVGLTYNTT-STVSHMISNRPDLILLVGDVTY 246 (552)
Q Consensus 210 rfaviGD~g~~~~~~-~~l~~l~~~~pDfvl~~GDl~Y 246 (552)
+++++||+|.....- ..++.+.....+-++++||++.
T Consensus 29 ~i~vvGDiHG~~~~l~~ll~~~~~~~~~~~vfLGD~VD 66 (271)
T smart00156 29 PVTVCGDIHGQFDDLLRLFDLNGPPPDTNYVFLGDYVD 66 (271)
T ss_pred CEEEEEeCcCCHHHHHHHHHHcCCCCCceEEEeCCccC
Confidence 689999999763321 1222222235678999999994
No 116
>cd07420 MPP_RdgC Drosophila melanogaster RdgC and related proteins, metallophosphatase domain. RdgC (retinal degeneration C) is a vertebrate serine-threonine protein phosphatase that is required to prevent light-induced retinal degeneration. In addition to its catalytic domain, RdgC has two C-terminal EF hands. Homologs of RdgC include the human phosphatases protein phosphatase with EF hands 1 and -2 (PPEF-1 and -2). PPEF-1 transcripts are present at low levels in the retina, PPEF-2 transcripts and PPEF-2 protein are present at high levels in photoreceptors. The PPP (phosphoprotein phosphatase) family, to which RdgC belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all
Probab=90.66 E-value=0.47 Score=49.55 Aligned_cols=22 Identities=18% Similarity=0.282 Sum_probs=17.5
Q ss_pred HHHHHHHHHHcCCcEEEEcccc
Q 008823 382 RVAMEDLLYKYGVDVVFNGHVH 403 (552)
Q Consensus 382 r~~l~~ll~~y~VdlvlsGH~H 403 (552)
.++.+..+++.+.++++=||.-
T Consensus 253 ~~~~~~Fl~~n~l~~IIR~He~ 274 (321)
T cd07420 253 PDVTSKVLQKHGLSLLIRSHEC 274 (321)
T ss_pred HHHHHHHHHHCCCcEEEEcChh
Confidence 4677788888888888888874
No 117
>PF09587 PGA_cap: Bacterial capsule synthesis protein PGA_cap; InterPro: IPR019079 CapA is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein [].
Probab=89.62 E-value=0.85 Score=45.72 Aligned_cols=65 Identities=12% Similarity=0.175 Sum_probs=44.1
Q ss_pred HHHHHHHHHHhhcccCCCCEEEEEeCCcccccCcCcccchHHHHHHHHHHHHHcCCcEEEEccccCceeee
Q 008823 339 DQYKWLEEDLANVEREVTPWLVATWHAPWYSTYKAHYREAECMRVAMEDLLYKYGVDVVFNGHVHAYERSN 409 (552)
Q Consensus 339 ~Q~~WL~~~L~~~~r~~~pwiIV~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~y~VdlvlsGH~H~yeR~~ 409 (552)
.+.+.+.+++++++ ++..++||+.|--.-... .-.+. ...+...|.+.|+|+|+.+|.|..+-..
T Consensus 168 ~~~~~i~~~i~~~r-~~~D~vIv~~HwG~e~~~----~p~~~-q~~~a~~lidaGaDiIiG~HpHv~q~~E 232 (250)
T PF09587_consen 168 PGIERIKEDIREAR-KKADVVIVSLHWGIEYEN----YPTPE-QRELARALIDAGADIIIGHHPHVIQPVE 232 (250)
T ss_pred chHHHHHHHHHHHh-cCCCEEEEEeccCCCCCC----CCCHH-HHHHHHHHHHcCCCEEEeCCCCcccceE
Confidence 44588888888876 567899999997422111 11122 3345555556899999999999876653
No 118
>cd07414 MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain. PP1 (protein phosphatase type 1) is a serine/threonine phosphatase that regulates many cellular processes including: cell-cycle progression, protein synthesis, muscle contraction, carbohydrate metabolism, transcription and neuronal signaling, through its interaction with at least 180 known targeting proteins. PP1 occurs in all tissues and regulates many pathways, ranging from cell-cycle progression to carbohydrate metabolism. Also included here are the PPKL (PP1 and kelch-like) enzymes including the PPQ, PPZ1, and PPZ2 fungal phosphatases. These PPKLs have a large N-terminal kelch repeat in addition to a C-terminal phosphoesterase domain. The PPP (phosphoprotein phosphatase) family, to which PP1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, Rdg
Probab=89.15 E-value=0.58 Score=48.29 Aligned_cols=23 Identities=17% Similarity=0.316 Sum_probs=18.4
Q ss_pred HHHHHHHHHHcCCcEEEEccccC
Q 008823 382 RVAMEDLLYKYGVDVVFNGHVHA 404 (552)
Q Consensus 382 r~~l~~ll~~y~VdlvlsGH~H~ 404 (552)
.+++++.|++.+.++++=||.-.
T Consensus 222 ~~~~~~Fl~~n~l~~iiR~He~~ 244 (293)
T cd07414 222 KDVVAKFLNKHDLDLICRAHQVV 244 (293)
T ss_pred HHHHHHHHHHcCCeEEEECCccc
Confidence 46778888889999999888743
No 119
>cd07415 MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain. PP2A-like family of phosphoprotein phosphatases (PPP's) including PP4 and PP6. PP2A (Protein phosphatase 2A) is a critical regulator of many cellular activities. PP2A comprises about 1% of total cellular proteins. PP2A, together with protein phosphatase 1 (PP1), accounts for more than 90% of all serine/threonine phosphatase activities in most cells and tissues. The PP2A subunit in addition to having a catalytic domain homologous to PP1, has a unique C-terminal tail, containing a motif that is conserved in the catalytic subunits of all PP2A-like phosphatases including PP4 and PP6, and has an important role in PP2A regulation. The PP2A-like family of phosphatases all share a similar heterotrimeric architecture, that includes: a 65kDa scaffolding subunit (A), a 36kDa catalytic subunit (C), and one of 18 regulatory subunits (B). The PPP (phosphoprotein phosphatase) family, to which PP2
Probab=88.47 E-value=0.71 Score=47.42 Aligned_cols=23 Identities=13% Similarity=0.274 Sum_probs=19.1
Q ss_pred HHHHHHHHHHcCCcEEEEccccC
Q 008823 382 RVAMEDLLYKYGVDVVFNGHVHA 404 (552)
Q Consensus 382 r~~l~~ll~~y~VdlvlsGH~H~ 404 (552)
.+++++.+++.++++++=||.-.
T Consensus 214 ~~~~~~Fl~~n~l~~iiR~He~~ 236 (285)
T cd07415 214 QDVVEEFNHNNGLTLICRAHQLV 236 (285)
T ss_pred HHHHHHHHHHCCCeEEEEcCccc
Confidence 56788889999999999999843
No 120
>PTZ00239 serine/threonine protein phosphatase 2A; Provisional
Probab=88.44 E-value=0.68 Score=47.97 Aligned_cols=22 Identities=5% Similarity=0.089 Sum_probs=18.9
Q ss_pred HHHHHHHHHHcCCcEEEEcccc
Q 008823 382 RVAMEDLLYKYGVDVVFNGHVH 403 (552)
Q Consensus 382 r~~l~~ll~~y~VdlvlsGH~H 403 (552)
.+++++.+++.+.++++=||.-
T Consensus 215 ~~~~~~Fl~~n~l~~iiR~He~ 236 (303)
T PTZ00239 215 AKVTKEFCRLNDLTLICRAHQL 236 (303)
T ss_pred HHHHHHHHHHCCCcEEEEcChh
Confidence 4688889999999999999984
No 121
>cd07418 MPP_PP7 PP7, metallophosphatase domain. PP7 is a plant phosphoprotein phosphatase that is highly expressed in a subset of stomata and thought to play an important role in sensory signaling. PP7 acts as a positive regulator of signaling downstream of cryptochrome blue light photoreceptors. PP7 also controls amplification of phytochrome signaling, and interacts with nucleotidediphosphate kinase 2 (NDPK2), a positive regulator of phytochrome signalling. In addition, PP7 interacts with heat shock transcription factor HSF and up-regulates protective heat shock proteins. PP7 may also play a role in salicylic acid-dependent defense signaling. The PPP (phosphoprotein phosphatase) family, to which PP7 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-,
Probab=87.73 E-value=0.94 Score=48.26 Aligned_cols=34 Identities=21% Similarity=0.358 Sum_probs=22.2
Q ss_pred EEEEEeccCCCCChHHHHHHHHH-C---CC-CEEEEcCcccc
Q 008823 210 RIAIVGDVGLTYNTTSTVSHMIS-N---RP-DLILLVGDVTY 246 (552)
Q Consensus 210 rfaviGD~g~~~~~~~~l~~l~~-~---~p-Dfvl~~GDl~Y 246 (552)
++.++||+|.... .+..+.+ . .. +.+|++||++.
T Consensus 67 ~i~VvGDIHG~~~---dL~~ll~~~g~~~~~~~ylFLGDyVD 105 (377)
T cd07418 67 EVVVVGDVHGQLH---DVLFLLEDAGFPDQNRFYVFNGDYVD 105 (377)
T ss_pred CEEEEEecCCCHH---HHHHHHHHhCCCCCCceEEEeccccC
Confidence 6899999997643 2223322 1 22 46899999994
No 122
>PTZ00480 serine/threonine-protein phosphatase; Provisional
Probab=87.56 E-value=0.7 Score=48.21 Aligned_cols=23 Identities=17% Similarity=0.252 Sum_probs=19.9
Q ss_pred HHHHHHHHHHcCCcEEEEccccC
Q 008823 382 RVAMEDLLYKYGVDVVFNGHVHA 404 (552)
Q Consensus 382 r~~l~~ll~~y~VdlvlsGH~H~ 404 (552)
.+++++.+++++.++++=||.-.
T Consensus 231 ~~~~~~Fl~~n~l~~IiR~Hq~v 253 (320)
T PTZ00480 231 QEIVQVFLKKHELDLICRAHQVV 253 (320)
T ss_pred HHHHHHHHHhCCCcEEEEcCccc
Confidence 57888999999999999999854
No 123
>KOG3325 consensus Membrane coat complex Retromer, subunit VPS29/PEP11 [Intracellular trafficking, secretion, and vesicular transport]
Probab=87.47 E-value=5.1 Score=36.87 Aligned_cols=39 Identities=23% Similarity=0.451 Sum_probs=30.5
Q ss_pred HHHHHHHHHcCCcEEEEccccCceeeeecccCccCCCCCeEEEeCCC
Q 008823 383 VAMEDLLYKYGVDVVFNGHVHAYERSNRVYNYTLDPCGPVHITVGDG 429 (552)
Q Consensus 383 ~~l~~ll~~y~VdlvlsGH~H~yeR~~pv~n~~~~~~g~vyiv~G~g 429 (552)
+.+.-|-++.+||+.+.||+|.++-.. -+|-.||.-|++
T Consensus 97 ~sL~~LaRqldvDILl~G~Th~f~Aye--------~eg~ffvnPGSa 135 (183)
T KOG3325|consen 97 ESLALLARQLDVDILLTGHTHKFEAYE--------HEGKFFVNPGSA 135 (183)
T ss_pred HHHHHHHHhcCCcEEEeCCceeEEEEE--------eCCcEEeCCCcc
Confidence 355566678899999999999988873 467788877765
No 124
>cd07381 MPP_CapA CapA and related proteins, metallophosphatase domain. CapA is one of three membrane-associated enzymes in Bacillus anthracis that is required for synthesis of gamma-polyglutamic acid (PGA), a major component of the bacterial capsule. The YwtB and PgsA proteins of Bacillus subtilis are closely related to CapA and are also included in this alignment model. CapA belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal
Probab=87.06 E-value=1.4 Score=43.76 Aligned_cols=61 Identities=16% Similarity=0.252 Sum_probs=37.6
Q ss_pred HHHHHHHhhcccCCCCEEEEEeCCcccccCcCcccchHHHHHHHHHHHHHcCCcEEEEccccCceee
Q 008823 342 KWLEEDLANVEREVTPWLVATWHAPWYSTYKAHYREAECMRVAMEDLLYKYGVDVVFNGHVHAYERS 408 (552)
Q Consensus 342 ~WL~~~L~~~~r~~~pwiIV~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~y~VdlvlsGH~H~yeR~ 408 (552)
+-+++.+++.+++ +..+||..|-..-... ........+...+.+.++|+|+.||.|..+-.
T Consensus 162 ~~~~~~i~~lr~~-~D~vIv~~H~G~e~~~-----~p~~~~~~la~~l~~~G~D~IiG~H~Hv~q~~ 222 (239)
T cd07381 162 ERIAADIAEAKKK-ADIVIVSLHWGVEYSY-----YPTPEQRELARALIDAGADLVIGHHPHVLQGI 222 (239)
T ss_pred HHHHHHHHHHhhc-CCEEEEEecCcccCCC-----CCCHHHHHHHHHHHHCCCCEEEcCCCCcCCCe
Confidence 4455555555433 7899999996442211 11112234444555679999999999987654
No 125
>cd00063 FN3 Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases.
Probab=86.96 E-value=5.4 Score=31.17 Aligned_cols=21 Identities=38% Similarity=0.597 Sum_probs=18.2
Q ss_pred EEEEeCCCCCCCEEEEEEecC
Q 008823 165 HHVRLTGLKPDTLYHYQCGDP 185 (552)
Q Consensus 165 h~v~ltgL~P~T~Y~Yrvg~~ 185 (552)
.++.+.+|.|+++|.+||..-
T Consensus 57 ~~~~i~~l~p~~~Y~~~v~a~ 77 (93)
T cd00063 57 TSYTLTGLKPGTEYEFRVRAV 77 (93)
T ss_pred cEEEEccccCCCEEEEEEEEE
Confidence 577889999999999999754
No 126
>PTZ00244 serine/threonine-protein phosphatase PP1; Provisional
Probab=86.84 E-value=0.83 Score=47.16 Aligned_cols=22 Identities=18% Similarity=0.294 Sum_probs=19.0
Q ss_pred HHHHHHHHHHcCCcEEEEcccc
Q 008823 382 RVAMEDLLYKYGVDVVFNGHVH 403 (552)
Q Consensus 382 r~~l~~ll~~y~VdlvlsGH~H 403 (552)
.++++..+++.+.++++=||.-
T Consensus 224 ~~~~~~Fl~~n~l~~iiR~Hq~ 245 (294)
T PTZ00244 224 EDIVNDFLDMVDMDLIVRAHQV 245 (294)
T ss_pred HHHHHHHHHHcCCcEEEEcCcc
Confidence 5678889999999999999984
No 127
>smart00854 PGA_cap Bacterial capsule synthesis protein PGA_cap. This protein is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein.
Probab=85.16 E-value=2.3 Score=42.24 Aligned_cols=59 Identities=19% Similarity=0.272 Sum_probs=35.3
Q ss_pred HHHHHhhcccCCCCEEEEEeCCcccccCcCcccchHHHHHHHHHHHHHcCCcEEEEccccCceee
Q 008823 344 LEEDLANVEREVTPWLVATWHAPWYSTYKAHYREAECMRVAMEDLLYKYGVDVVFNGHVHAYERS 408 (552)
Q Consensus 344 L~~~L~~~~r~~~pwiIV~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~y~VdlvlsGH~H~yeR~ 408 (552)
+++++++++. ++.++||+.|--.-.... .... ...+..-+.+.++|+++.||.|..+..
T Consensus 162 i~~~i~~lr~-~~D~vIv~~H~G~e~~~~----p~~~-~~~~A~~l~~~G~DvIiG~H~H~~~~~ 220 (239)
T smart00854 162 ILADIARARK-KADVVIVSLHWGVEYQYE----PTDE-QRELAHALIDAGADVVIGHHPHVLQPI 220 (239)
T ss_pred HHHHHHHHhc-cCCEEEEEecCccccCCC----CCHH-HHHHHHHHHHcCCCEEEcCCCCcCCce
Confidence 4444444432 478999999976532111 0111 223444444579999999999987654
No 128
>cd07387 MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2), C-terminal domain. PolD2 (DNA polymerase delta, subunit 2) is an auxiliary subunit of the eukaryotic DNA polymerase delta (PolD) complex thought to play a regulatory role and to serve as a scaffold for PolD assembly by interacting simultaneously with all of the other three subunits. PolD2 is catalytically inactive and lacks the active site residues required for phosphoesterase activity in other members of this superfamily. PolD2 is also involved in the recruitment of several proteins regulating DNA metabolism, including p21, PDIP1, PDIP38, PDIP46, and WRN. Human PolD consists of four subunits: p125 (PolD1), p50 (PolD2), p66(PolD3), and p12(PolD4). PolD is one of three major replicases in eukaryotes. PolD also plays an essential role in translesion DNA synthesis, homologous recombination, and DNA repair. Within the PolD complex, PolD2 tightly associates with PolD3. PolD2 belongs to the metallophosphatase (MPP) superfamily
Probab=84.30 E-value=2.1 Score=43.27 Aligned_cols=30 Identities=13% Similarity=0.315 Sum_probs=24.5
Q ss_pred HHHHHHHhhhhhhccCCeEEecCCcccccc
Q 008823 276 RWDYWGRYMQPVLSKVPIMVVEGNHEYEEQ 305 (552)
Q Consensus 276 ~wd~~~~~l~~l~~~iP~~~v~GNHE~~~~ 305 (552)
..+.+..++..+.+.+|+.+.|||||-...
T Consensus 80 ~~~~ld~~l~~l~~~i~V~imPG~~Dp~~~ 109 (257)
T cd07387 80 AVKELDNFLSQLASSVPVDLMPGEFDPANH 109 (257)
T ss_pred HHHHHHHHHHhhhcCCeEEECCCCCCcccc
Confidence 355667788888899999999999998643
No 129
>cd07419 MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase domain. Bsu1 encodes a nuclear serine-threonine protein phosphatase found in plants and protozoans. Bsu1 has a C-terminal phosphatase domain and an N-terminal Kelch-repeat domain. Bsu1 is preferentially expressed in elongating plant cells. It modulates the phosphorylation state of Bes1, a transcriptional regulator phosphorylated by the glycogen synthase kinase Bin2, as part of a steroid hormone signal transduction pathway. The PPP (phosphoprotein phosphatase) family, to which Bsu1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most
Probab=83.40 E-value=2.3 Score=44.27 Aligned_cols=21 Identities=10% Similarity=0.221 Sum_probs=14.0
Q ss_pred HHHHHHHHHHcCCcEEEEccc
Q 008823 382 RVAMEDLLYKYGVDVVFNGHV 402 (552)
Q Consensus 382 r~~l~~ll~~y~VdlvlsGH~ 402 (552)
.++++..+++.++++++=||.
T Consensus 242 ~~~~~~Fl~~n~l~~iiRgHe 262 (311)
T cd07419 242 PDRVHRFLEENDLQMIIRAHE 262 (311)
T ss_pred HHHHHHHHHHCCCeEEEEech
Confidence 356666667777777777765
No 130
>cd07417 MPP_PP5_C PP5, C-terminal metallophosphatase domain. Serine/threonine protein phosphatase-5 (PP5) is a member of the PPP gene family of protein phosphatases that is highly conserved among eukaryotes and widely expressed in mammalian tissues. PP5 has a C-terminal phosphatase domain and an extended N-terminal TPR (tetratricopeptide repeat) domain containing three TPR motifs. The PPP (phosphoprotein phosphatase) family, to which PP5 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cel
Probab=83.29 E-value=2.2 Score=44.57 Aligned_cols=22 Identities=9% Similarity=0.160 Sum_probs=18.0
Q ss_pred HHHHHHHHHHcCCcEEEEcccc
Q 008823 382 RVAMEDLLYKYGVDVVFNGHVH 403 (552)
Q Consensus 382 r~~l~~ll~~y~VdlvlsGH~H 403 (552)
.+++++.|++.+.++++=||.-
T Consensus 233 ~~~~~~Fl~~n~l~~iiR~He~ 254 (316)
T cd07417 233 PDVTKRFLEENNLEYIIRSHEV 254 (316)
T ss_pred HHHHHHHHHHcCCcEEEECCcc
Confidence 4577788888999999988874
No 131
>KOG4221 consensus Receptor mediating netrin-dependent axon guidance [Signal transduction mechanisms]
Probab=82.46 E-value=4.4 Score=48.49 Aligned_cols=33 Identities=21% Similarity=0.221 Sum_probs=25.6
Q ss_pred EeCCCCCCCEEEEEEecCC---CCCccceeEEEcCC
Q 008823 168 RLTGLKPDTLYHYQCGDPS---IPAMSGTYCFRTMP 200 (552)
Q Consensus 168 ~ltgL~P~T~Y~Yrvg~~~---~~~~S~~~~F~T~p 200 (552)
.+++|+|+|.|.+||.... .+..|++.+|.|+-
T Consensus 677 l~~~Lep~T~Y~vrIsa~t~nGtGpaS~w~~aeT~~ 712 (1381)
T KOG4221|consen 677 LFNGLEPNTQYRVRISAMTVNGTGPASEWVSAETPE 712 (1381)
T ss_pred HhhcCCCCceEEEEEEEeccCCCCCcccceeccCcc
Confidence 3578999999999997432 23678899999864
No 132
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=82.19 E-value=10 Score=43.88 Aligned_cols=37 Identities=35% Similarity=0.601 Sum_probs=31.0
Q ss_pred EEEEeCCCCCCCEEEEEEecCC---CCCccceeEEEcCCC
Q 008823 165 HHVRLTGLKPDTLYHYQCGDPS---IPAMSGTYCFRTMPD 201 (552)
Q Consensus 165 h~v~ltgL~P~T~Y~Yrvg~~~---~~~~S~~~~F~T~p~ 201 (552)
..|+|+||+|+|+|-+||..-. -+..|....|.|.+.
T Consensus 498 ~~~ti~gL~p~t~YvfqVRarT~aG~G~~S~~~~fqT~~~ 537 (996)
T KOG0196|consen 498 TTATITGLKPGTVYVFQVRARTAAGYGPYSGKHEFQTLPS 537 (996)
T ss_pred ceEEeeccCCCcEEEEEEEEecccCCCCCCCceeeeecCc
Confidence 5789999999999999997532 247899999999886
No 133
>smart00060 FN3 Fibronectin type 3 domain. One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins.
Probab=79.78 E-value=11 Score=28.23 Aligned_cols=22 Identities=36% Similarity=0.584 Sum_probs=18.8
Q ss_pred EEEEeCCCCCCCEEEEEEecCC
Q 008823 165 HHVRLTGLKPDTLYHYQCGDPS 186 (552)
Q Consensus 165 h~v~ltgL~P~T~Y~Yrvg~~~ 186 (552)
+...|.+|+|+++|.++|..-.
T Consensus 57 ~~~~i~~L~~~~~Y~v~v~a~~ 78 (83)
T smart00060 57 TSYTLTGLKPGTEYEFRVRAVN 78 (83)
T ss_pred cEEEEeCcCCCCEEEEEEEEEc
Confidence 6788999999999999997543
No 134
>PF04042 DNA_pol_E_B: DNA polymerase alpha/epsilon subunit B; InterPro: IPR007185 DNA polymerase epsilon is essential for cell viability and chromosomal DNA replication in budding yeast. In addition, DNA polymerase epsilon may be involved in DNA repair and cell-cycle checkpoint control. The enzyme consists of at least four subunits in mammalian cells as well as in yeast. The largest subunit of DNA polymerase epsilon is responsible for polymerase activity. In mouse, the DNA polymerase epsilon subunit B is the second largest subunit of the DNA polymerase. A part of the N-terminal was found to be responsible for the interaction with SAP18. Experimental evidence suggests that this subunit may recruit histone deacetylase to the replication fork to modify the chromatin structure [].; GO: 0003677 DNA binding, 0003887 DNA-directed DNA polymerase activity, 0006260 DNA replication; PDB: 3E0J_C 3FLO_G.
Probab=71.70 E-value=2.5 Score=40.83 Aligned_cols=82 Identities=13% Similarity=0.323 Sum_probs=41.6
Q ss_pred EEEEeccCCCCCh--HHHHHHHH-----HCCCCEEEEcCccccccccccCCCCCCcccccCCCCCCcccchHHHH---HH
Q 008823 211 IAIVGDVGLTYNT--TSTVSHMI-----SNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWD---YW 280 (552)
Q Consensus 211 faviGD~g~~~~~--~~~l~~l~-----~~~pDfvl~~GDl~Yad~~~~~G~~~d~~~~~~~~~~~~e~y~~~wd---~~ 280 (552)
|++++|.+.+.+. -+.++++. +.+|+.+|++|+++.......... .....+....+ ..
T Consensus 1 Iv~~Sg~~~~~~~~~~~~L~~~l~~~~~~~~p~~lIl~G~fi~~~~~~~~~~------------~~~~~~~~~~~~~~~~ 68 (209)
T PF04042_consen 1 IVFASGPFLDSDNLSLEPLRDLLSGVEDASKPDVLILMGPFIDSPHPYISSG------------SVPDSYSFEEDFLKEL 68 (209)
T ss_dssp EEEEES--CTTT-HHHHHHHHHHHCCCHCTTECEEEEES-SCBTTSHHHHHT---------------HHCCHHHHHHHHC
T ss_pred CEEEecCccCCCHhHHHHHHHHHHhccccCCCcEEEEeCCCcCccccccccc------------cccccccccHHHHHHH
Confidence 6788998887432 22344433 457999999999996432110000 00001111111 22
Q ss_pred HHhhhhhhccCCeEEecCCccccc
Q 008823 281 GRYMQPVLSKVPIMVVEGNHEYEE 304 (552)
Q Consensus 281 ~~~l~~l~~~iP~~~v~GNHE~~~ 304 (552)
...+..+...+.++.+||+||...
T Consensus 69 ~~~~~~i~~~~~vvlvPg~~D~~~ 92 (209)
T PF04042_consen 69 DSFLESILPSTQVVLVPGPNDPTS 92 (209)
T ss_dssp HHHHCCCHCCSEEEEE--TTCTT-
T ss_pred HHHHhhcccccEEEEeCCCccccc
Confidence 344556667899999999999864
No 135
>KOG4258 consensus Insulin/growth factor receptor (contains protein kinase domain) [Signal transduction mechanisms]
Probab=70.71 E-value=18 Score=42.05 Aligned_cols=121 Identities=22% Similarity=0.177 Sum_probs=69.4
Q ss_pred CCceEEEeecC-CCCeeEEEEEeCcccccCCCCCCCCCCCccEEEEcccCCCCCeE-----EEEEE--EEEeeeeccCCc
Q 008823 85 EPEQISVSLSS-AHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRK-----ATGRS--LVYSQLYPFLGL 156 (552)
Q Consensus 85 ~P~qi~lt~~~-~p~s~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~-----~~g~~--~~y~~~~~~~g~ 156 (552)
++.-++|+... +.+++.++|....+. +. -+. ..=.+.|.+.+...... +-|.. .+....+| ++.
T Consensus 488 e~~~l~~~~~~~~~dsi~lrW~~~~~~-d~-r~l-----lg~~~~yKEaP~qNvT~~dg~~aCg~~~W~~~~v~~~-~~~ 559 (1025)
T KOG4258|consen 488 EDLVLQFSSTVTSADSILLRWERYQPP-DM-RDL-----LGFLLHYKEAPFQNVTEEDGRDACGSNSWNVVDVDPP-DLI 559 (1025)
T ss_pred ccceeeeeeEEeecceeEEEecccCCc-ch-hhh-----heeeEeeccCCccccceecCccccccCcceEEeccCC-cCC
Confidence 46666666664 348999999986543 10 000 12357777777432222 11211 11222222 222
Q ss_pred cccccCeEEEEEeCCCCCCCEEEEEEecCC-------CCCccceeEEEcCCCCCCCCCCeEEEEEecc
Q 008823 157 QNYTSGIIHHVRLTGLKPDTLYHYQCGDPS-------IPAMSGTYCFRTMPDSSSTSYPSRIAIVGDV 217 (552)
Q Consensus 157 ~~y~s~~~h~v~ltgL~P~T~Y~Yrvg~~~-------~~~~S~~~~F~T~p~~g~~~~p~rfaviGD~ 217 (552)
.+ ++..-...|.||+|.|.|-|-|..-. ..+.|++..++|.|...+. |+.++.-++.
T Consensus 560 p~--~~~~~~~~l~~LkP~TqYAvfVkT~t~t~~~~~~~A~S~I~YvqT~~~~Psp--Pl~~ls~sns 623 (1025)
T KOG4258|consen 560 PN--DGTHPGFLLDGLKPWTQYAVFVKTLTVTEAHEAYEAKSKIGYVQTLPDIPSP--PLDVLSKSNS 623 (1025)
T ss_pred Cc--cccccceehhcCCccceeEEEEeeeehhhhccccccccceEEEEecCCCCCC--cchhhhccCc
Confidence 22 23333678999999999999886431 1278999999999875432 6666665554
No 136
>KOG3513 consensus Neural cell adhesion molecule L1 [Signal transduction mechanisms]
Probab=66.29 E-value=33 Score=41.15 Aligned_cols=77 Identities=23% Similarity=0.302 Sum_probs=44.2
Q ss_pred CCceEEEeecCCCCeeEEEEEeCcccccCCCCCCCCCCCccEEEEcccCCCCCeEEEEEEEEEeeeeccCCccccccCeE
Q 008823 85 EPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSGII 164 (552)
Q Consensus 85 ~P~qi~lt~~~~p~s~~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~~~g~~~~y~~~~~~~g~~~y~s~~~ 164 (552)
.|..+++ .+.+-++|.|+|.......|- -..=.|+|....+.. +..... ++.+-.
T Consensus 822 ap~~~~~-~~~s~s~~~v~W~~~~~~nG~--------l~gY~v~Y~~~~~~~-----~~~~~~-----------~i~~~~ 876 (1051)
T KOG3513|consen 822 APTKLSA-KPLSSSEVNLSWKPPLWDNGK--------LTGYEVKYWKINEKE-----GSLSRV-----------QIAGNR 876 (1051)
T ss_pred CCcccee-ecccCceEEEEecCcCccCCc--------cceeEEEEEEcCCCc-----ccccce-----------eecCCc
Confidence 3444433 233458999999664332221 122457777755443 111110 112334
Q ss_pred EEEEeCCCCCCCEEEEEEecCC
Q 008823 165 HHVRLTGLKPDTLYHYQCGDPS 186 (552)
Q Consensus 165 h~v~ltgL~P~T~Y~Yrvg~~~ 186 (552)
-.++|+||+|.|.|++.|..-+
T Consensus 877 ~~~~ltgL~~~T~Y~~~vrA~n 898 (1051)
T KOG3513|consen 877 TSWRLTGLEPNTKYRFYVRAYT 898 (1051)
T ss_pred ceEeeeCCCCCceEEEEEEEec
Confidence 5789999999999999987543
No 137
>KOG4221 consensus Receptor mediating netrin-dependent axon guidance [Signal transduction mechanisms]
Probab=53.73 E-value=1.3e+02 Score=36.70 Aligned_cols=36 Identities=19% Similarity=0.188 Sum_probs=28.4
Q ss_pred EEEEeCCCCCCCEEEEEEecCCC---CCccceeEEEcCC
Q 008823 165 HHVRLTGLKPDTLYHYQCGDPSI---PAMSGTYCFRTMP 200 (552)
Q Consensus 165 h~v~ltgL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~p 200 (552)
++.+|+||+|.|.|.|||...+. +..|+..+|+|+-
T Consensus 574 ~e~ti~gL~k~TeY~~~vvA~N~~G~g~sS~~i~V~Tls 612 (1381)
T KOG4221|consen 574 TEYTINGLEKYTEYSIRVVAYNSAGSGVSSADITVRTLS 612 (1381)
T ss_pred cEEEeecCCCccceEEEEEEecCCCCCCCCCceEEEecc
Confidence 67789999999999999975443 3566778888863
No 138
>PF07353 Uroplakin_II: Uroplakin II; InterPro: IPR009952 This family contains uroplakin II, which is approximately 180 residues long and seems to be restricted to mammals. Uroplakin II is an integral membrane protein, and is one of the components of the apical plaques of mammalian urothelium formed by the asymmetric unit membrane - this is believed to play a role in strengthening the urothelial apical surface to prevent the cells from rupturing during bladder distension [].; GO: 0016044 cellular membrane organization, 0030176 integral to endoplasmic reticulum membrane
Probab=49.52 E-value=19 Score=33.55 Aligned_cols=35 Identities=20% Similarity=0.239 Sum_probs=21.7
Q ss_pred EeCCCCCCCEEEEEE--ecCCCCCccceeEEEcCCCC
Q 008823 168 RLTGLKPDTLYHYQC--GDPSIPAMSGTYCFRTMPDS 202 (552)
Q Consensus 168 ~ltgL~P~T~Y~Yrv--g~~~~~~~S~~~~F~T~p~~ 202 (552)
.+++|.|||+||.+. ..+.....|.+..-.|.|..
T Consensus 105 qVtNL~pGTkY~isY~VtkgtstESS~~i~msT~n~~ 141 (184)
T PF07353_consen 105 QVTNLQPGTKYYISYLVTKGTSTESSNEIPMSTLNRK 141 (184)
T ss_pred EeeccCCCcEEEEEEEEecCccceecceecccccccc
Confidence 579999999997554 44433334444555565543
No 139
>PTZ00235 DNA polymerase epsilon subunit B; Provisional
Probab=47.49 E-value=1.1e+02 Score=31.42 Aligned_cols=80 Identities=16% Similarity=0.208 Sum_probs=48.8
Q ss_pred CeEEEEEeccCCCCChHHHHHHHH---H---------CCCCEEEEcCccccccccccCCCCCCcccccCCCCCCcccchH
Q 008823 208 PSRIAIVGDVGLTYNTTSTVSHMI---S---------NRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQP 275 (552)
Q Consensus 208 p~rfaviGD~g~~~~~~~~l~~l~---~---------~~pDfvl~~GDl~Yad~~~~~G~~~d~~~~~~~~~~~~e~y~~ 275 (552)
..+|+++||.+... ..+++++. + ..|-.+|+.|+++-.-.. .+ ....+.|..
T Consensus 27 ~~~~VilSDV~LD~--p~tl~~L~kvf~~y~~~~~~~~~P~~fVL~GnF~S~p~~--~~------------~~~~~~yk~ 90 (291)
T PTZ00235 27 RHNWIIMHDVYLDS--PYTFEVLDKMLSLYVNTYPENELPVGFIFMGDFISLKFD--YN------------RNFHKVYIK 90 (291)
T ss_pred ceEEEEEEeeccCC--HHHHHHHHHHHHHhhccCcccCCCeEEEEecCccCCccc--CC------------CCchHHHHH
Confidence 46999999999863 23333332 1 127889999999843110 00 011234555
Q ss_pred HHHHHHHh-h---hhhhccCCeEEecCCcccc
Q 008823 276 RWDYWGRY-M---QPVLSKVPIMVVEGNHEYE 303 (552)
Q Consensus 276 ~wd~~~~~-l---~~l~~~iP~~~v~GNHE~~ 303 (552)
..|.+... + ..+..+.-++.|||-.|-.
T Consensus 91 ~Fd~La~llls~fp~L~~~s~fVFVPGpnDPw 122 (291)
T PTZ00235 91 GFEKLSVMLISKFKLILEHCYLIFIPGINDPC 122 (291)
T ss_pred HHHHHHHHHHHhChHHHhcCeEEEECCCCCCC
Confidence 56655542 2 2356778899999999974
No 140
>KOG3947 consensus Phosphoesterases [General function prediction only]
Probab=42.32 E-value=45 Score=34.02 Aligned_cols=32 Identities=19% Similarity=0.207 Sum_probs=22.8
Q ss_pred CeEEEEEeccCCCCChHHHHHHHH-HCCCCEEEEcCccc
Q 008823 208 PSRIAIVGDVGLTYNTTSTVSHMI-SNRPDLILLVGDVT 245 (552)
Q Consensus 208 p~rfaviGD~g~~~~~~~~l~~l~-~~~pDfvl~~GDl~ 245 (552)
-.||+.++|.|.-... +. -..-|+.+|+||..
T Consensus 61 ~~r~VcisdtH~~~~~------i~~~p~gDvlihagdfT 93 (305)
T KOG3947|consen 61 YARFVCISDTHELTFD------INDIPDGDVLIHAGDFT 93 (305)
T ss_pred ceEEEEecCcccccCc------cccCCCCceEEeccCCc
Confidence 3699999999954221 12 12558999999998
No 141
>KOG0372 consensus Serine/threonine specific protein phosphatase involved in glycogen accumulation, PP2A-related [Carbohydrate transport and metabolism; Signal transduction mechanisms]
Probab=30.29 E-value=83 Score=31.65 Aligned_cols=34 Identities=18% Similarity=0.341 Sum_probs=19.3
Q ss_pred EEEEeccCCCCChHHHHHHHHH--CCC-CEEEEcCcccc
Q 008823 211 IAIVGDVGLTYNTTSTVSHMIS--NRP-DLILLVGDVTY 246 (552)
Q Consensus 211 faviGD~g~~~~~~~~l~~l~~--~~p-Dfvl~~GDl~Y 246 (552)
+.+.||+|... ...++-..- .-| .=-+++||++.
T Consensus 45 vtvcGDIHGQf--~Dllelf~igG~~~~t~YLFLGDyVD 81 (303)
T KOG0372|consen 45 VTVCGDIHGQF--YDLLELFRIGGDVPETNYLFLGDYVD 81 (303)
T ss_pred cEEeecccchH--HHHHHHHHhCCCCCCCceEeecchhc
Confidence 56899999652 222222221 112 24578899995
No 142
>KOG0374 consensus Serine/threonine specific protein phosphatase PP1, catalytic subunit [Signal transduction mechanisms; General function prediction only]
Probab=28.55 E-value=51 Score=34.69 Aligned_cols=21 Identities=24% Similarity=0.441 Sum_probs=18.0
Q ss_pred HHHHHHHHHHcCCcEEEEccc
Q 008823 382 RVAMEDLLYKYGVDVVFNGHV 402 (552)
Q Consensus 382 r~~l~~ll~~y~VdlvlsGH~ 402 (552)
.+.+++++.+.++|+++-+|.
T Consensus 233 ~~~v~~f~~~~~ldlivRaHq 253 (331)
T KOG0374|consen 233 PAVVEDFCKKLDLDLIVRAHQ 253 (331)
T ss_pred HHHHHHHHHHhCcceEEEcCc
Confidence 467888899999999999886
No 143
>KOG0371 consensus Serine/threonine protein phosphatase 2A, catalytic subunit [Signal transduction mechanisms]
Probab=28.54 E-value=80 Score=31.98 Aligned_cols=34 Identities=24% Similarity=0.380 Sum_probs=20.8
Q ss_pred EEEEeccCCCCChHHHHHHH--HHCCCC-EEEEcCcccc
Q 008823 211 IAIVGDVGLTYNTTSTVSHM--ISNRPD-LILLVGDVTY 246 (552)
Q Consensus 211 faviGD~g~~~~~~~~l~~l--~~~~pD-fvl~~GDl~Y 246 (552)
+.+.||.|... ...++.+ -...|| -.++.||++.
T Consensus 62 vtvcGDvHGqf--~dl~ELfkiGG~~pdtnylfmGDyvd 98 (319)
T KOG0371|consen 62 VTVCGDVHGQF--HDLIELFKIGGLAPDTNYLFMGDYVD 98 (319)
T ss_pred eEEecCcchhH--HHHHHHHHccCCCCCcceeeeeeecc
Confidence 67899999653 2333322 223555 3567899995
No 144
>cd02856 Glycogen_debranching_enzyme_N_term Glycogen_debranching_enzyme N-terminal domain. Glycogen debranching enzymes have both 4-alpha-glucanotransferase and amylo-1,6-glucosidase activities. As a transferase it transfers a segment of a 1,4-alpha-D-glucan to a new 4-position in an acceptor, which may be glucose or another 1,4-alpha-D-glucan. As a glucosidase it catalyzes the endohydrolysis of 1,6-alpha-D-glucoside linkages at points of branching in chains of 1,4-linked alpha-D-glucose residues. The N-terminus of the glycogen debranching enzyme may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase.
Probab=28.14 E-value=73 Score=27.07 Aligned_cols=23 Identities=26% Similarity=0.443 Sum_probs=19.8
Q ss_pred CeEEEEEeCCCCCCCEEEEEEec
Q 008823 162 GIIHHVRLTGLKPDTLYHYQCGD 184 (552)
Q Consensus 162 ~~~h~v~ltgL~P~T~Y~Yrvg~ 184 (552)
+-+.++.+.++.+|+.|.|+|..
T Consensus 44 ~GvW~~~v~~~~~g~~Y~y~i~g 66 (103)
T cd02856 44 GGVWHGFLPGIKAGQRYGFRVHG 66 (103)
T ss_pred CCEEEEEECCCCCCCEEEEEECC
Confidence 34588999999999999999964
No 145
>cd02852 Isoamylase_N_term Isoamylase N-terminus domain. Isoamylase (aka glycogen 6-glucanohydrolase) is one of the starch-debranching enzymes that catalyzes the hydrolysis of alpha-1,6-glucosidic linkages specific in alpha-glucans such as amylopectin or glycogen. Isoamylase contains a bound calcium ion, but this is not in the same position as the conserved calcium ion that has been reported in other alpha-amylase family enzymes. The N-terminus of isoamylase may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase.
Probab=28.08 E-value=74 Score=27.74 Aligned_cols=23 Identities=43% Similarity=0.788 Sum_probs=20.0
Q ss_pred CeEEEEEeCCCCCCCEEEEEEec
Q 008823 162 GIIHHVRLTGLKPDTLYHYQCGD 184 (552)
Q Consensus 162 ~~~h~v~ltgL~P~T~Y~Yrvg~ 184 (552)
+-++++.|.++.+|+.|-|||..
T Consensus 48 ~gvW~~~v~~~~~g~~Y~y~v~g 70 (119)
T cd02852 48 GDVWHVFVEGLKPGQLYGYRVDG 70 (119)
T ss_pred CCEEEEEECCCCCCCEEEEEECC
Confidence 45688999999999999999973
No 146
>cd02853 MTHase_N_term Maltooligosyl trehalose synthase (MTSase) N-terminus domain. MTSase and maltooligosyl trehalose trehalohydrolase (MTHase) work together to produce trehalose. MTSase is responsible for converting the alpha-1,4-glucosidic linkage to an alpha,alpha-1,1-glucosidic linkage at the reducing end of the maltooligosaccharide through an intramolecular transglucosylation reaction, while MTHase hydrolyzes the penultimate alpha-1,4 linkage of the reducing end, resulting in the release of trehalose. The N-terminus of MTSase may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase.
Probab=26.13 E-value=79 Score=25.80 Aligned_cols=20 Identities=20% Similarity=0.315 Sum_probs=17.6
Q ss_pred eEEEEEeCCCCCCCEEEEEEe
Q 008823 163 IIHHVRLTGLKPDTLYHYQCG 183 (552)
Q Consensus 163 ~~h~v~ltgL~P~T~Y~Yrvg 183 (552)
-++++.+.++ +|+.|.|++.
T Consensus 40 G~W~~~v~~~-~g~~Y~y~v~ 59 (85)
T cd02853 40 GWFEAEVPGA-AGTRYRYRLD 59 (85)
T ss_pred cEEEEEeCCC-CCCeEEEEEC
Confidence 3578899999 9999999997
No 147
>PF09294 Interfer-bind: Interferon-alpha/beta receptor, fibronectin type III; InterPro: IPR015373 Members of this family adopt a secondary structure consisting of seven beta-strands arranged in an immunoglobulin-like beta-sandwich, in a Greek-key topology. They are required for binding to interferon-alpha []. ; PDB: 1A21_A 3LQM_B 3ELA_T 1AHW_C 2A2Q_T 1TFH_B 1FAK_T 1WSS_T 1W2K_T 2FIR_T ....
Probab=26.13 E-value=65 Score=27.07 Aligned_cols=20 Identities=35% Similarity=0.453 Sum_probs=15.6
Q ss_pred EEEEeCCCCCCCEEEEEEec
Q 008823 165 HHVRLTGLKPDTLYHYQCGD 184 (552)
Q Consensus 165 h~v~ltgL~P~T~Y~Yrvg~ 184 (552)
-.+.|.+|+|+|.|..+|..
T Consensus 67 ~~~~l~~L~p~t~YCv~V~~ 86 (106)
T PF09294_consen 67 SSVTLSDLKPGTNYCVSVQA 86 (106)
T ss_dssp EEEEEES--TTSEEEEEEEE
T ss_pred CEEEEeCCCCCCCEEEEEEE
Confidence 35689999999999999986
No 148
>TIGR02855 spore_yabG sporulation peptidase YabG. Members of this family are the protein YabG, demonstrated for Bacillus subtilis to be an endopeptidase able to release N-terminal peptides from a number of sporulation proteins, including CotT, CotF, and SpoIVA. It appears to be expressed under control of sigma-K.
Probab=25.37 E-value=56 Score=33.28 Aligned_cols=52 Identities=23% Similarity=0.236 Sum_probs=33.7
Q ss_pred HHHHHHHHhhcccCCCCEEEEEeCCcccccCcCcccchHHHHHHHHHHHHHcCCc-EEEEccccCc
Q 008823 341 YKWLEEDLANVEREVTPWLVATWHAPWYSTYKAHYREAECMRVAMEDLLYKYGVD-VVFNGHVHAY 405 (552)
Q Consensus 341 ~~WL~~~L~~~~r~~~pwiIV~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~y~Vd-lvlsGH~H~y 405 (552)
.+.|+.-|+..++-..| ++-.|.| ...+.+.+.+||++|+.| |||.||+-.-
T Consensus 114 ~~YL~~Cl~~Ykql~i~--a~G~~~~-----------E~eqp~~i~~Ll~~~~PDIlViTGHD~~~ 166 (283)
T TIGR02855 114 PEYLRKCLKLYKKIGVP--VVGIHCK-----------EKEMPEKVLDLIEEVRPDILVITGHDAYS 166 (283)
T ss_pred HHHHHHHHHHHHHhCCc--eEEEEec-----------chhchHHHHHHHHHhCCCEEEEeCchhhh
Confidence 35777777765443333 2233322 124567899999999999 5799999543
No 149
>PF05582 Peptidase_U57: YabG peptidase U57; InterPro: IPR008764 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. The peptidases families associated with clan U- have an unknown catalytic mechanism as the protein fold of the active site domain and the active site residues have not been reported. This is a group of peptidases belong to MEROPS peptidase family U57 (clan U-). The type example is the YabG protein of Bacillus subtilis. This is a protease involved in the synthesis and maturation of the spore coat proteins SpoIVA and YrbA of B. subtilis [].
Probab=25.00 E-value=69 Score=32.79 Aligned_cols=52 Identities=23% Similarity=0.277 Sum_probs=33.5
Q ss_pred HHHHHHHHhhcccCCCCEEEEEeCCcccccCcCcccchHHHHHHHHHHHHHcCCc-EEEEccccCc
Q 008823 341 YKWLEEDLANVEREVTPWLVATWHAPWYSTYKAHYREAECMRVAMEDLLYKYGVD-VVFNGHVHAY 405 (552)
Q Consensus 341 ~~WL~~~L~~~~r~~~pwiIV~~H~P~y~s~~~~~~~~~~~r~~l~~ll~~y~Vd-lvlsGH~H~y 405 (552)
-+.|+.-|+-..+-..| ..-.|.+ ...|.+.+.+||.+++.| |||.||+=.-
T Consensus 115 ~~YL~~Cl~~Ykql~i~--a~G~~~~-----------E~eqp~~i~~Ll~~~~PDIlViTGHD~~~ 167 (287)
T PF05582_consen 115 EEYLNKCLKVYKQLGIP--AVGIHVP-----------EKEQPEKIYRLLEEYRPDILVITGHDGYL 167 (287)
T ss_pred HHHHHHHHHHHHHcCCc--eEEEEec-----------hHHhhHHHHHHHHHcCCCEEEEeCchhhh
Confidence 35677777655433322 2222222 235678899999999999 5799998743
No 150
>cd02860 Pullulanase_N_term Pullulanase domain N-terminus. Pullulanase (AKA dextrinase; alpha-dextrin endo-1,6-alpha glucosidase) is an enzyme with action similar to that of isoamylase; it cleaves 1,6-alpha-glucosidic linkages in pullulan, amylopectin, and glycogen, and in alpha-and beta-amylase limit-dextrins of amylopectin and glycogen. The N-terminus of pullulanase may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase.
Probab=24.57 E-value=86 Score=26.37 Aligned_cols=24 Identities=21% Similarity=0.164 Sum_probs=20.2
Q ss_pred CeEEEEEeCCCCCCCEEEEEEecC
Q 008823 162 GIIHHVRLTGLKPDTLYHYQCGDP 185 (552)
Q Consensus 162 ~~~h~v~ltgL~P~T~Y~Yrvg~~ 185 (552)
+-++++.+.++.+|+.|.||+...
T Consensus 46 ~gvw~~~v~~~~~g~~Y~y~i~~~ 69 (100)
T cd02860 46 NGVWSVTLDGDLEGYYYLYEVKVY 69 (100)
T ss_pred CCEEEEEeCCccCCcEEEEEEEEe
Confidence 346889999999999999999743
Done!